BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780483|ref|YP_003064896.1| putative inner membrane
protein translocase component YidC [Candidatus Liberibacter asiaticus
str. psy62]
         (581 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|118589754|ref|ZP_01547159.1| putative inner membrane protein translocase component YidC [Stappia
           aggregata IAM 12614]
 gi|118437840|gb|EAV44476.1| putative inner membrane protein translocase component YidC [Stappia
           aggregata IAM 12614]
          Length = 606

 Score =  486 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 252/600 (42%), Positives = 369/600 (61%), Gaps = 24/600 (4%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIE--------------------EMNNERKNIQT 42
            N N  +AI LS+I++  WQ F   P++E                       ++ +   +
Sbjct: 4   ENRNTILAIVLSLIVLLGWQYFVAAPQLERQQAELQAQQEAAQQTATDSANPSKPQPTGS 63

Query: 43  VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
                    +   +   +R  AL+ S RV +  PSL GS+NLKG + DD+ L+ YH  V+
Sbjct: 64  QGANTAAPAAGQQMAFANREAALAASQRVTIDTPSLEGSVNLKGGRLDDIRLKDYHETVN 123

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161
            +SP + L SPS +   Y+A+  +V     N+ LP  +TVW++     LTP+TP+ L + 
Sbjct: 124 KSSPTIVLFSPSGSPKPYYADYGWVGDPGTNLALPGPDTVWSVDGEATLTPSTPLTLSWD 183

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
           N   ++F+RT S+D++Y+F +  +V N   D +   P G I R         + + EG +
Sbjct: 184 NGAGLIFKRTFSVDDNYMFTVNQSVENTGSDAVTLYPYGLIARKGMPETNGIYILHEGLL 243

Query: 222 AVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
            V G + L E  Y D+ + S I        WLGI+DKYWA+  IP+    F   F + S 
Sbjct: 244 GVFGAEGLKEVDYDDLVEESSIRPSKVDQGWLGITDKYWAATLIPTPGQEFQPGFSH-SA 302

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
               +QA +  N +T+  G +  T+++LFAGAKE   +  YE+ L+I RFE+LIDWGWFY
Sbjct: 303 TTDVFQADYLGNGVTVAGGSTGETSSYLFAGAKETKLLDGYEEALSIERFELLIDWGWFY 362

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           F+ KPMF  + YF++L GNFG+AI++ TV VKL+FFPLA K YVS + MK +QP++ E+R
Sbjct: 363 FLTKPMFFAIDYFFHLFGNFGVAILVVTVIVKLIFFPLANKSYVSMSKMKLVQPQMTEIR 422

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           EK+     Q  Q+A+++LYK   INPLAGC PI++QIPVFF++YKV+ +++EMRHAPF+G
Sbjct: 423 EKYSD-DRQKQQQALMELYKKEKINPLAGCLPIVVQIPVFFSLYKVLYVTIEMRHAPFFG 481

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           WI+DL+A DPT +F LFG++P+  P  + +G+WP+IM ++MFIQMKM+P P D  Q MI 
Sbjct: 482 WIQDLSAPDPTTLFNLFGLIPWDPPQMLMLGVWPLIMGITMFIQMKMNPAPPDPTQQMIF 541

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            WMPV+F F L+SFPAGL+IYW+W+N +S+ QQ VIM+  GA++ L D L S F +   +
Sbjct: 542 TWMPVIFTFMLASFPAGLVIYWAWNNTLSVTQQYVIMRRQGAKVELWDNLGSLFKRKKAA 601


>gi|307943178|ref|ZP_07658523.1| inner membrane protein OxaA [Roseibium sp. TrichSKD4]
 gi|307773974|gb|EFO33190.1| inner membrane protein OxaA [Roseibium sp. TrichSKD4]
          Length = 603

 Score =  485 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 246/597 (41%), Positives = 360/597 (60%), Gaps = 21/597 (3%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEE-----------------MNNERKNIQTVKQ 45
            N N  +AIALS+ ++ AWQ F   P++E+                              
Sbjct: 4   ENRNTLLAIALSLAVLLAWQYFVAQPQLEKQQAALQAQQAAEQAQSDPQRPSAQNAPGAA 63

Query: 46  PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
                ++        R QA++ S RV L  P L GS+NL G + DD+ L+ YH  V  +S
Sbjct: 64  TTGAPSASGQEQFQTREQAIAASERVTLDTPRLSGSVNLVGGRIDDIRLKDYHETVDKSS 123

Query: 106 PIVTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
           P V L SP  +   ++A+  +VS    ++ LP ++TVW+  +G  LTP TP+ L F N  
Sbjct: 124 PTVVLFSPKGSPEPFYADYGWVSDPGADVALPGADTVWSAPAGAQLTPNTPLTLTFDNGG 183

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
            + F+RT S+DE+Y+F +  +V N+  + +   P G + R      TN + + EG + V 
Sbjct: 184 GLTFKRTFSIDENYMFSVTQSVENSGSEAVTLYPYGLLARTGQPETTNFYILHEGLLGVF 243

Query: 225 GDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
           G++ L E  Y D+ ++ +         WLGI+DKYWA+  +P    +F   F + +    
Sbjct: 244 GEEGLKEVDYDDLAETGVDRPGKVDRGWLGITDKYWAATLVPEPGQTFQPSFTHSNV-TD 302

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            YQA F  + + I  G +    ++LFAGAKE   +  YE  L I +FE+LIDWGWFYF+ 
Sbjct: 303 NYQADFLGSAVVIAAGSTSEANSYLFAGAKETKLLDSYEATLNIEQFELLIDWGWFYFLT 362

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KPMF  + + + + GNFG+AI+L TV +KL+FFPLA K YVS + MK +QP++ E+R+++
Sbjct: 363 KPMFFAIDWLFMMFGNFGVAILLVTVAIKLVFFPLANKSYVSMSKMKLVQPQMQEIRDRY 422

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                +  Q+A+++LYK   INPLAGC PIL+QIPVFFA+YKV+ +++EMRHAPF+GWI+
Sbjct: 423 GDDKAK-QQQALMELYKKEKINPLAGCLPILIQIPVFFALYKVLFVTIEMRHAPFFGWIQ 481

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DL+A DPT IF LFG++P+  P  + VGIWP++M ++MF+QMKM+P P D  Q MI  WM
Sbjct: 482 DLSAPDPTTIFNLFGMIPWDPPQLLTVGIWPLLMGITMFVQMKMNPAPPDPTQQMIFTWM 541

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           P++F F L+SFPAGL+IYW+W+N +SI QQ VIM   G ++ L D L+STF +    
Sbjct: 542 PIIFTFMLASFPAGLVIYWAWNNFLSIAQQWVIMSRQGVKVELFDNLKSTFKRKPAK 598


>gi|254502069|ref|ZP_05114220.1| 60Kd inner membrane protein [Labrenzia alexandrii DFL-11]
 gi|222438140|gb|EEE44819.1| 60Kd inner membrane protein [Labrenzia alexandrii DFL-11]
          Length = 608

 Score =  485 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 257/602 (42%), Positives = 368/602 (61%), Gaps = 26/602 (4%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEE----------------------MNNERKNI 40
            N N  +AI LS+I++ AWQ FY  P++E                         +     
Sbjct: 4   ENRNTILAIVLSLIVLLAWQYFYAGPQLERQQAALQAQQEAEAAQQSAPGGVNPDAPTPS 63

Query: 41  QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
                     ++ +      R QALS + RV +  P L GSINL G + DDL L+ YH  
Sbjct: 64  VAGSGTTVAPSATSPQGFASREQALSATQRVVIDTPRLEGSINLTGGRLDDLRLKDYHET 123

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLV 159
           V  +SP + L SP+ + N Y+++  +V+ A  +I LP  +T+W++     LTP+TP+ L 
Sbjct: 124 VDRSSPTIVLFSPTGSPNPYYSDYGWVADAGASITLPGPDTIWSVNGSSDLTPSTPLTLS 183

Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
           + N   ++F RT S+DE+Y+F +  +VTNNS D +   P G I R      T  + + EG
Sbjct: 184 WDNGEGLVFNRTFSVDENYMFDVTQSVTNNSGDVVTLYPYGLIARKGIPETTGIWILHEG 243

Query: 220 FIAVLGDKSLVEQKYSDIEKS-SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
            + V G++ LVE  YSD+E+   +        WLGI+DKYWA+  IP+    F   F Y 
Sbjct: 244 LLGVFGEEGLVEVDYSDLEEDGPVRPAAVDRGWLGITDKYWAATLIPTPGQEFQPGFSYA 303

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
           +     +QA +  N + +  G    T+++LFAGAKE   +  YE  L+I RFE+LIDWGW
Sbjct: 304 AQSGN-FQADYLGNAVVVPAGGVGETSSYLFAGAKETNLLDAYEASLSIERFELLIDWGW 362

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           FYF+ KPMF  + + ++  GNFG+AI+L TV +KL FFPLA K YVS + MK +QP++ E
Sbjct: 363 FYFLTKPMFYAIDFLFHYFGNFGVAILLVTVIIKLFFFPLANKSYVSMSKMKLVQPQMTE 422

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +REK+     Q  Q+A+++LYK   INPLAGC PIL+QIPVFFA+YKV+ +++EMRHAPF
Sbjct: 423 IREKYAD-DRQKQQQALMELYKKEKINPLAGCLPILIQIPVFFALYKVLFVTIEMRHAPF 481

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           +GWI+DL+A DPT++F LFG++P+  P  + +G+WP+IM ++MF+QMKM+P P D  Q M
Sbjct: 482 FGWIQDLSAPDPTSLFNLFGLIPWDPPQLLMLGVWPLIMGITMFVQMKMNPAPPDPTQQM 541

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           I  WMPVVF F L+SFPAGL+IYW+W+N +SI QQ VIM   G ++ L D + S F +  
Sbjct: 542 IFTWMPVVFTFMLASFPAGLVIYWAWNNSLSIAQQWVIMSRQGVKVELWDNIGSMFKRKK 601

Query: 579 NS 580
            +
Sbjct: 602 PA 603


>gi|241202849|ref|YP_002973945.1| inner membrane protein translocase component YidC [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240856739|gb|ACS54406.1| 60 kDa inner membrane insertion protein [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 597

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 287/593 (48%), Positives = 385/593 (64%), Gaps = 17/593 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI----------------QTVK 44
           ME N NYF+AIALSV+IV  WQ  Y+ PRIE     ++                  QT  
Sbjct: 1   MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKVQEAQKAQQQTEQVQQPAAGGQTPA 60

Query: 45  QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
           QP+    +  A       QAL+ SPRV +   +L GSINL GA+ DDL L+GYH  V  +
Sbjct: 61  QPSGAAPTSQAAATATLEQALAKSPRVVIDTAALSGSINLAGARLDDLKLKGYHETVDDS 120

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
           SPI+TL SP+ TK+ YF EL Y+ +     +P  +T+W    G  LT  TP+ L + N  
Sbjct: 121 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGPSTLWTAPEGAKLTEKTPVTLSYTNDK 180

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
            + F RTIS+DE Y+F + D + N        +  GR+ R+   T  + + + EGFI V+
Sbjct: 181 GLTFTRTISVDERYMFTVADKIENAGQAPASLNSYGRVTRYNKPTTPSVYVLHEGFIGVI 240

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
           GD  LVE KY+  EK ++     +  WLGI+DKYWA+  +P +   + + F + +DG  R
Sbjct: 241 GDDGLVETKYTAAEKEAVKPAKSTGGWLGITDKYWAATIVPPQSAPYEASFSHFADGQPR 300

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           YQA +  +  T+ PG+SI   N +FAGAKE P I  YE   +IP+F+ LIDWGWFYFI K
Sbjct: 301 YQADYKEDAFTVAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPKFDRLIDWGWFYFITK 360

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           PMF LM +F+   GNFG+AI+ TT+ VKLLFFPLA KQY S ANMK +QPK++EL+ KF 
Sbjct: 361 PMFKLMDFFFRYFGNFGVAILCTTIVVKLLFFPLASKQYASMANMKRMQPKMEELKAKFA 420

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                 LQ+A +QLYK   INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD
Sbjct: 421 D-DRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 479

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+A DPT I  LFG+LPF  P  +H+G+WP+IM ++MF+QM+M+P P D  QAMI  WMP
Sbjct: 480 LSAPDPTTIVNLFGLLPFEAPTILHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFTWMP 539

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           +VF+F L+SFPAGL+IYW+W+N +S+ QQ+VIMK HG ++ L D L+  F + 
Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVAQQSVIMKRHGVKVELFDNLKGLFRRK 592


>gi|150395307|ref|YP_001325774.1| putative inner membrane protein translocase component YidC
           [Sinorhizobium medicae WSM419]
 gi|166977420|sp|A6U5K9|OXAA_SINMW RecName: Full=Inner membrane protein oxaA
 gi|150026822|gb|ABR58939.1| 60 kDa inner membrane insertion protein [Sinorhizobium medicae
           WSM419]
          Length = 597

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 289/594 (48%), Positives = 395/594 (66%), Gaps = 16/594 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA------ 54
           ME N NYFVAIALSV+I+ AWQ FYV P++E+     +  Q  +       +        
Sbjct: 2   MENNRNYFVAIALSVLILIAWQFFYVSPKMEKDRIAAEKAQQAQSQPGTQQAAPGQAAPG 61

Query: 55  --------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
                       + R QA+  S RV +  P+L GSINL GA+FDDL L+GY   V   SP
Sbjct: 62  QALPGGAIPSAAESRDQAIGKSARVAIDTPALSGSINLTGARFDDLKLKGYRETVDPKSP 121

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
           ++TL SP+ T + YF E+ Y+ +     +P   TVW L  G  LTP+TP+ L + N   I
Sbjct: 122 VITLFSPAETADGYFTEIGYIGSDATGSVPGPQTVWMLSGGDKLTPSTPVTLSYTNDKGI 181

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
            F RTIS+D+ Y+F++VD++ N++   +  S  GR+ R    +  + + + EGF+ V G+
Sbjct: 182 TFTRTISVDDRYMFEVVDSIKNDAAAAVSLSSYGRVTRFNKPSTPSIYVLHEGFVGVAGE 241

Query: 227 KSLVEQKYSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
             L E  YSD+E        +S   WLGI+DKYWA+  +P ++T F  +F + +DG  RY
Sbjct: 242 HGLQEVGYSDVEDEEPVEPGKSTGGWLGITDKYWAATIVPPQDTPFDIRFSHFADGRPRY 301

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
           Q+ + ++ +T+ PG+S    N +FAGAKE P + +YE   +IP F+ LIDWGWFYFI KP
Sbjct: 302 QSDYKSDAVTVAPGQSAEVKNLIFAGAKEVPVVDNYELTYSIPNFDKLIDWGWFYFITKP 361

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           MF +M +F+ L GNFGIAI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF  
Sbjct: 362 MFKMMDFFFRLFGNFGIAILITTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGD 421

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
                LQ+AM+QLYK   INPLAGCWPIL+QIPVFFA+YKVI +++EMRHAPF+GWI+DL
Sbjct: 422 -DRMGLQQAMMQLYKEEKINPLAGCWPILIQIPVFFALYKVIYVTIEMRHAPFFGWIQDL 480

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525
           +A DPT I  LFG+LPF  P F+H+GIWPI+M ++MF+QM+M+P P D  QAM+  WMPV
Sbjct: 481 SAPDPTTIINLFGLLPFEGPAFLHLGIWPIVMGVTMFLQMRMNPTPPDPTQAMLFTWMPV 540

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           VF F L+SFPAGL+IYW+W+N +SI+QQ +IMK  G ++ L D L+S FSK   
Sbjct: 541 VFTFMLASFPAGLVIYWAWNNTLSILQQGIIMKRQGVKVELFDNLKSLFSKKPK 594


>gi|220925223|ref|YP_002500525.1| YidC translocase/secretase [Methylobacterium nodulans ORS 2060]
 gi|254773002|sp|B8IMM9|OXAA_METNO RecName: Full=Inner membrane protein oxaA
 gi|219949830|gb|ACL60222.1| YidC translocase/secretase [Methylobacterium nodulans ORS 2060]
          Length = 605

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 243/602 (40%), Positives = 362/602 (60%), Gaps = 25/602 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA------- 54
               N  +AIALS+ ++  W  F   P++E    ++        P +   S         
Sbjct: 3   NDKTNMIIAIALSLAVLLGWNYFVAAPQVERQRQQQAQTSASPSPKEGGPSAPVPGTLPG 62

Query: 55  -----AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
                      R +AL+ SPRV +   +L GS+ LKG + DD+ L+GYH  V   SP + 
Sbjct: 63  ASGGNPQAALTREEALARSPRVRIDTEALKGSVALKGGRIDDVALKGYHETVDPKSPEIV 122

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           LLSP+ + N Y+AE  +V       LPN +TVW    G +LT   P+ L + N   ++F 
Sbjct: 123 LLSPAGSANPYYAEFGWVGQGAGP-LPNGDTVWT-ADGDLLTAKKPLTLTWDNGAGLVFR 180

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
           RT+S+D+ Y+F + D+V N     +   P G + R         + + EG I VLGDK L
Sbjct: 181 RTLSVDDKYMFTVEDSVENKGQSAVTLYPYGLVSRWGKPHTQGYYVLHEGLIGVLGDKGL 240

Query: 230 VEQKYSDIEKSS---------ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
            E  Y  + K +         +S    +  +LGI+DKYWA+  IP ++T +   F    +
Sbjct: 241 QEYTYDKMAKENPLGSPGTRGLSWPGVTGGFLGITDKYWAAATIPDQKTPYTGSFTERDE 300

Query: 281 GHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
           G  + YQ        T+ PG  +  +  LFAGAKE  TI  Y + L I +F+++IDWGWF
Sbjct: 301 GATKVYQTSSLGEARTLAPGAGVQASQHLFAGAKEVSTIDAYRQKLDIKQFDLMIDWGWF 360

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           YFI KPMF  + +FY L GNFG++I++ T+ +KL F P+A + YVS A MK +QP++  +
Sbjct: 361 YFITKPMFKALDFFYKLFGNFGVSILVVTLILKLFFLPIANRSYVSMAKMKAVQPEMTAI 420

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           RE++     +  Q+AM++LY+   INP+AGCWP+++QIPVFFA+YKV+ +++EMRHAPF+
Sbjct: 421 RERYADDKVK-QQQAMMELYRKEKINPVAGCWPVVIQIPVFFALYKVLFVTIEMRHAPFF 479

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
           GWI+DLAA DPT++  LFG+LPF  P  +H+G+WPI+M ++MF+QMKM+P P D  QA +
Sbjct: 480 GWIRDLAAPDPTSVLNLFGLLPFAAPDLVHLGVWPIVMGITMFLQMKMNPAPPDPVQAQV 539

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
             +MP++F F L SFPAGL+IYW+W+N++SI+QQ  IM+ +G ++ L D LR+TFS++  
Sbjct: 540 FTFMPIIFTFMLGSFPAGLVIYWAWNNLLSILQQYWIMRRNGVKVELWDNLRTTFSRSSP 599

Query: 580 SQ 581
            +
Sbjct: 600 VK 601


>gi|116250222|ref|YP_766060.1| inner membrane protein translocase component YidC [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|166977404|sp|Q1MM58|OXAA_RHIL3 RecName: Full=Inner membrane protein oxaA
 gi|115254870|emb|CAK05944.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 598

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 289/593 (48%), Positives = 384/593 (64%), Gaps = 17/593 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----------------ERKNIQTVK 44
           ME N NYF+AIALSV+IV  WQ  Y+ PRIE                         QT  
Sbjct: 2   MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGQTPA 61

Query: 45  QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
           Q +    S  A       QAL  SPRV +  P+L GSINL GA+ DDL L+GYH  V  +
Sbjct: 62  QTSGAAPSGQAAATATLEQALQKSPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDS 121

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
           SPI+TL SP+ TK+ YF EL Y+ +     +P  +T+W    G  LT  TP+ L + N  
Sbjct: 122 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGPSTLWTAPEGAKLTEKTPVTLSYTNDK 181

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
            + F RTIS+DE Y+F + D + N        S  GR+ R+   T  + + + EGFI V+
Sbjct: 182 GLTFTRTISVDERYMFTVADKIENTGQAPAALSSYGRVTRYNKPTTPSVYVLHEGFIGVI 241

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
           GD  L+E KYS +EK +++    +  WLGI+DKYWA+  +P +  ++ + F Y +DG  R
Sbjct: 242 GDDGLIETKYSAVEKEAVAPAKSTGGWLGITDKYWAATIVPPQSAAYEAHFSYFADGQPR 301

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           YQA +  +  T+ PG+SI   N +FAGAKE P I  YE   +IP+F+ LIDWGWFYFI K
Sbjct: 302 YQADYKDDAFTVAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPKFDRLIDWGWFYFITK 361

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           PMF LM +F+   GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF 
Sbjct: 362 PMFKLMDFFFRYFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFA 421

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                 LQ+A +QLYK   INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD
Sbjct: 422 D-DRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 480

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+A DPT I  LFG+LPF  P  +H+G+WP+IM ++MF+QM+M+P P D  QAMI NWMP
Sbjct: 481 LSAPDPTTIVNLFGLLPFEGPTLLHLGVWPLIMGVTMFVQMRMNPTPPDPTQAMIFNWMP 540

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           +VF+F L+SFPAGL+IYW+W+N +S+ QQ +IMK HG ++ L D L+  F + 
Sbjct: 541 LVFMFMLASFPAGLVIYWAWNNTLSVAQQGLIMKRHGVKVELFDNLKGLFRRK 593


>gi|153008692|ref|YP_001369907.1| putative inner membrane protein translocase component YidC
           [Ochrobactrum anthropi ATCC 49188]
 gi|151560580|gb|ABS14078.1| 60 kDa inner membrane insertion protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 607

 Score =  479 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 273/604 (45%), Positives = 380/604 (62%), Gaps = 26/604 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41
           ME N N+F+ IALS++++  WQ FY+ P+ E    + +  +                   
Sbjct: 1   MENNRNFFITIALSILVLTLWQVFYLGPKTEAQREQARIEEQQQQKQQATQQQAQSGDTP 60

Query: 42  ----TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97
               T        +  AA     R  A++ + RVE+  PSL GSINL GA+ DDL L+ Y
Sbjct: 61  QMPATSGNIPGHSDVAAAGGTLTREAAVAQTQRVEIDTPSLRGSINLTGARLDDLFLKRY 120

Query: 98  HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157
           H  V  NSP + LL+PS  K  YF EL +        +P  NTVW +     LTP+TP+ 
Sbjct: 121 HETVDDNSPQIELLAPSALKQGYFVELGFTGNDTTGPVPGPNTVWTVEGNNKLTPSTPVT 180

Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNTFGV 216
           L + N  NI F+R IS+D+ Y+F + DT+TNN+   I  +  GR+   ++P+ A+ T+ +
Sbjct: 181 LTYTNEKNITFKRVISVDDAYMFAVEDTITNNTGAPISLASYGRVTRFNQPEHASATYVL 240

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275
            EG I V+G   L E KYS +E    IS    S  WLGI+DKYWA+  +P ++  F  +F
Sbjct: 241 HEGLIGVMGQDGLQEIKYSKVEDDKDISFKDVSGGWLGITDKYWAATLVPPQDEKFTGRF 300

Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
            + ++   RYQ  F    +TI PG++ T  N +FAGAK    I  YE+ L I +FE+LID
Sbjct: 301 SHFTNDRPRYQTDFLGAPMTIAPGQAQTLKNHVFAGAKVVSNIKAYEEKLGIKQFELLID 360

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           WGWFYFI KPMF L+ + Y   GNFG+AI++ TV +K LFFPLA K Y S A MK +QPK
Sbjct: 361 WGWFYFITKPMFYLIDWIYKFSGNFGVAILVVTVLLKGLFFPLANKSYKSMARMKLVQPK 420

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           + E+REK+     +  Q+ M++LYK   INPLAGCWP+L+QIPVFFA+YKV+ +++EMRH
Sbjct: 421 LTEIREKYADDKMK-QQQEMMRLYKEEKINPLAGCWPVLVQIPVFFALYKVLYVTIEMRH 479

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           APF+GWI+DLAA DPT++F LFG+LPF +P F+ +G+WP++M ++MF+QM+M+P P D  
Sbjct: 480 APFFGWIQDLAAPDPTSLFNLFGLLPFGVPHFLMIGVWPLLMGITMFLQMRMNPTPPDPT 539

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
           QA I  WMPV+F F L+SFPAGL+IYW+W+N++SI QQ +IMK  G +I L D L+  F 
Sbjct: 540 QAAIFTWMPVIFTFMLASFPAGLVIYWAWNNLLSITQQGIIMKRQGVKIELFDNLKGLFK 599

Query: 576 KNYN 579
           +   
Sbjct: 600 RKPK 603


>gi|110632737|ref|YP_672945.1| putative inner membrane protein translocase component YidC
           [Mesorhizobium sp. BNC1]
 gi|110283721|gb|ABG61780.1| protein translocase subunit yidC [Chelativorans sp. BNC1]
          Length = 609

 Score =  478 bits (1230), Expect = e-132,   Method: Composition-based stats.
 Identities = 271/607 (44%), Positives = 369/607 (60%), Gaps = 29/607 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------- 45
           ME N N  + IALSV+I+  WQ FYV PR++      +      Q               
Sbjct: 1   MENNRNLLITIALSVVILTLWQVFYVNPRVDAQREAAQIEAQRAQETEEKLGTQGADIPA 60

Query: 46  ------PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99
                    V  S        R +AL+ + RV +  P L G+INL GA+ DDL L+ Y +
Sbjct: 61  PGATPGSTAVPGSAIPRTQVTRQEALAGAERVTIDTPRLAGTINLAGARLDDLLLKDYRV 120

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159
            V  +SP + LL P+     YF E+ Y   A+   +P  +TVW L  G  L+P +P+ L 
Sbjct: 121 TVDKDSPNIDLLGPAGLPEGYFVEVGYTGNASTGAVPGPDTVWQLQEGSTLSPGSPVTLS 180

Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
           F N   + F RT ++DE+YLF I DT+ N + + +     GR  R         + + EG
Sbjct: 181 FTNDRGLTFLRTFAVDENYLFTITDTIRNAAGEPVEIRNYGRTTRFGQPKTAGIYILHEG 240

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYL 278
           FI VLG++ L E  YS  ++       +S + WLGI+DKYWA   +P  +  F  +F Y 
Sbjct: 241 FIGVLGEEGLREVDYSTAQEDGQVLPGKSADGWLGITDKYWAVTMVPRAQKDFEPRFAYF 300

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
           SDG  RYQA +  + +T+ PG        +FAGAKE   +  YE    I +FE+LIDWGW
Sbjct: 301 SDGRERYQADYLTDPVTVAPGGEAKIETLVFAGAKEVHVVDAYETQHNIRQFELLIDWGW 360

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           FYFI KPMF L+ + + L+GNFG+AI+ TTVFVKL+FFPLA K Y S ANMK +QP + E
Sbjct: 361 FYFITKPMFYLIDWLFRLLGNFGVAILATTVFVKLVFFPLANKSYKSMANMKKVQPALLE 420

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +REK+     +  Q+AM++LYK   INPLAGCWPIL+QIPVFFA+YKV+ +++EMRHAPF
Sbjct: 421 IREKYADDKMK-QQQAMMELYKKEKINPLAGCWPILIQIPVFFALYKVLYVTIEMRHAPF 479

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPA 512
           +GWI+DL+A DPT IF LFG+LPF          F+ +G+WPIIM ++MF+QM+M+P P 
Sbjct: 480 FGWIQDLSAPDPTTIFNLFGLLPFDPSQVPVFGPFLMLGVWPIIMGITMFLQMRMNPTPP 539

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  QAMI NWMPV+F F L++FPAGL+IYW+W+N++SI+QQ VIMK  GA+I L D + +
Sbjct: 540 DPTQAMIFNWMPVIFTFMLATFPAGLVIYWAWNNLLSIIQQGVIMKRQGAKIELWDNMVN 599

Query: 573 TFSKNYN 579
            F +   
Sbjct: 600 LFRRKPK 606


>gi|209547692|ref|YP_002279609.1| inner membrane protein translocase component YidC [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209533448|gb|ACI53383.1| 60 kDa inner membrane insertion protein [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 597

 Score =  478 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 288/593 (48%), Positives = 391/593 (65%), Gaps = 17/593 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51
           ME+N NYF+AIALSV+IV  WQ  Y+ PRIE     ++  +  ++  QV           
Sbjct: 1   MEKNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQKTEQVQQPAANGAAPA 60

Query: 52  -------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                  S  AV      QAL+ +PRV +  P+L GSINL GA+ DDL L+GYH  V  +
Sbjct: 61  PTSGTAPSGQAVATATLEQALAKNPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDS 120

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
           SP +TL SP+ TK+ YF EL Y+ +     +P ++T+W    G  LT  TP+ L + N  
Sbjct: 121 SPTITLFSPAETKDGYFTELGYIGSDATGNVPGASTLWTAPEGAKLTDKTPVTLSYTNDK 180

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
            + F RTIS+DE Y+F + D V N     +  S  GR+ R+   T  + + + EGFI V+
Sbjct: 181 GLTFTRTISVDERYMFTVADKVENTGQAPVSLSSYGRVTRYNKPTTPSVYVLHEGFIGVI 240

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
           GD  LVE KY+  EK ++     +  WLGI+DKYWA+  IP + +++ ++F + +DG  R
Sbjct: 241 GDDGLVETKYTAAEKEAVMPPKSTGGWLGITDKYWAATIIPPQTSAYEARFSHFADGQPR 300

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           YQA +  +  T+ PG+SI   N +FAGAKE P I  YE   +IP+F+ LIDWGWFYFI K
Sbjct: 301 YQADYKDDAFTVAPGQSIELKNLVFAGAKEVPVIDGYETSYSIPKFDRLIDWGWFYFITK 360

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           PMF LM +FY   GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF 
Sbjct: 361 PMFKLMDFFYRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFA 420

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                 LQ+A +QLYK   INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD
Sbjct: 421 D-DRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 479

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+A DPT I  LFG+LPF  P  +H+G+WP+IM ++MF+QM+M+P P D  QAMI  WMP
Sbjct: 480 LSAPDPTTIVNLFGLLPFEAPTILHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFTWMP 539

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK  G ++ L D L+  F + 
Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRQGVKVELFDNLKGLFRRK 592


>gi|86356094|ref|YP_467986.1| putative inner membrane protein translocase component YidC
           [Rhizobium etli CFN 42]
 gi|86280196|gb|ABC89259.1| putative inner membrane transmembrane protein [Rhizobium etli CFN
           42]
          Length = 597

 Score =  478 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 293/593 (49%), Positives = 389/593 (65%), Gaps = 17/593 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----------------ERKNIQTVK 44
           ME N NYF+AIALSV+IV  WQ  Y+ PRIE                         Q   
Sbjct: 1   MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQTQQPAAGGQAPA 60

Query: 45  QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
           Q +    S  A     R QAL  +PR+ +   +L GSINL GA+ DDL L+GYH  V  +
Sbjct: 61  QTSGAAPSGQAAATATREQALEKTPRIAIDTAALSGSINLAGARLDDLKLKGYHETVDDS 120

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
           SP +TL SP+ TK+ YF EL Y+ +     +P  +T+W    G  LT  TP+ L + N  
Sbjct: 121 SPTITLFSPAETKDGYFTELGYIGSDTTGAVPGPSTLWTAPEGAKLTEKTPVTLSYTNDK 180

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
            + F RTIS+DE Y+F + D + N        S  GR+MR+   T  + + + EGFI V+
Sbjct: 181 GLTFTRTISVDERYMFTVADKIENTGQAPAALSSYGRVMRYNKPTTPSVYVLHEGFIGVI 240

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
           GD  L+E KYS +EK ++S    +  WLGI+DKYWA+  +P + +++ ++F Y SDG  R
Sbjct: 241 GDDGLIESKYSAVEKEAVSPAKSAGGWLGITDKYWAATIVPPQSSAYEAKFSYFSDGQPR 300

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           YQA +  +  ++ PG+SI   N +FAGAKE P I  YE   +IP+F+ LIDWGWFYFI K
Sbjct: 301 YQADYKNDAFSVAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPKFDRLIDWGWFYFITK 360

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           PMF LM +FY   GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF 
Sbjct: 361 PMFKLMDFFYRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFG 420

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                 LQ+AM+QLYK   INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD
Sbjct: 421 D-DRMGLQQAMMQLYKDEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 479

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+A DPT I  LFG+LPF  P F+H+G+WP+IM ++MF+QM+M+P P D  QAMI NWMP
Sbjct: 480 LSAPDPTTIVNLFGLLPFEAPTFLHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFNWMP 539

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK HG +I L D LR  F + 
Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRHGVKIELFDNLRGLFRRK 592


>gi|328545250|ref|YP_004305359.1| transmembrane protein, OxaA-like, preprotein translocase component
           [polymorphum gilvum SL003B-26A1]
 gi|326414992|gb|ADZ72055.1| Transmembrane protein, OxaA-like, preprotein translocase component
           [Polymorphum gilvum SL003B-26A1]
          Length = 607

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 258/603 (42%), Positives = 365/603 (60%), Gaps = 26/603 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE----------------------EMNNERK 38
           M  N N F+AIALS++++  WQ F   P++E                             
Sbjct: 1   MADNRNTFLAIALSLVVLLGWQYFVARPQLERQQAELAQQDAQQQAAGQDAQAPTPGATA 60

Query: 39  NIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98
                   +    + A  +   R  AL  S RV ++ P + GSINL GA+ DDL L+ Y 
Sbjct: 61  PGSLPAPGSTAPAAGAQPVALTREAALGTSARVTIETPRVSGSINLAGARIDDLRLKDYR 120

Query: 99  LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKILTPTTPIK 157
             V   SP + L SP      Y+A+  +V+     + LP  +++W++     LTP TP+ 
Sbjct: 121 ETVDPKSPTIVLFSPKGGPKPYYADFGWVTDGTKTVALPGPDSLWSVEGSDRLTPQTPVT 180

Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           L F N   ++F+RT ++DE+Y+F +   V N + + IR  P G I+R         + + 
Sbjct: 181 LTFDNGEGLVFKRTFTIDENYMFSVSQEVVNGTQEAIRLFPYGLIVRRGKPETAGFYILH 240

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFK 276
           EG I V G+K L E  YSD+E+          + WLGI+DKYWA+  IP   +SF   F 
Sbjct: 241 EGLIGVFGEKGLQEVDYSDVEEDGQIRPGQVDSGWLGITDKYWAATLIPMPGSSFQPSFG 300

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
           Y       +QA F    + +  G S + +++LFAGAKE   I  YE+ L I RFE+LIDW
Sbjct: 301 YT-ATTDNFQADFLGAAVDVASGASGSASSYLFAGAKETKVIDAYEEALNIARFELLIDW 359

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           GWFYF+ KPMF ++ + ++LVGNFGIAI+L TV VKL+FFPLA K YVS + MK +QP++
Sbjct: 360 GWFYFLTKPMFFVIDWLFHLVGNFGIAILLVTVLVKLVFFPLANKSYVSMSKMKLVQPQM 419

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
            E+R+++K    +  Q+A+++LYK   INPLAGC PIL+QIPVFFA+YKV+ +++EMRHA
Sbjct: 420 TEIRDRYKDDKAK-QQQALMELYKKEKINPLAGCLPILIQIPVFFALYKVLFVTIEMRHA 478

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           PF+GWI+DL+A DPT IF LFG++P+  P  + +GIWP+IM ++MF+QMKM+P P D  Q
Sbjct: 479 PFFGWIQDLSAPDPTTIFNLFGLIPWDPPQMLMLGIWPLIMGVTMFVQMKMNPAPPDPTQ 538

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
            MI  WMPV+F F L+SFPAGL+IYW+W+N +SI QQ VIM+  GA++ L D L+ TF +
Sbjct: 539 QMIFTWMPVIFTFMLASFPAGLVIYWAWNNSLSIAQQYVIMRRQGAKVELWDNLKITFKR 598

Query: 577 NYN 579
              
Sbjct: 599 KKP 601


>gi|114706827|ref|ZP_01439727.1| putative inner membrane transmembrane protein [Fulvimarina pelagi
           HTCC2506]
 gi|114537775|gb|EAU40899.1| putative inner membrane transmembrane protein [Fulvimarina pelagi
           HTCC2506]
          Length = 603

 Score =  477 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 274/601 (45%), Positives = 373/601 (62%), Gaps = 24/601 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------TVKQPNQVDNSYA 54
           ME N N+ +A+ALS++++  WQ   + PR++E   + +  Q      T + P   D    
Sbjct: 1   MEMNRNFLIAMALSIMVLVGWQFLVIGPRMDEQQRQNEIAQNEGSLQTPQTPAGSDQDSL 60

Query: 55  AVLI--------------DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
                               R Q ++   RV +  P L GSINL GA+ DDL L+ YH  
Sbjct: 61  TAPSGRESMVPSPNLPQNQSREQVIAGGNRVTIDTPELTGSINLTGARLDDLRLKHYHET 120

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
           V  +SP + LLSP    N YFAE   +      +L  +NT W    G  LTP TP+ L  
Sbjct: 121 VDDSSPTIVLLSPEELPNGYFAEYGLIQPGTG-QLVGANTEWQAEDGAELTPDTPVTLTA 179

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
              + +   R IS+D++++F   DTV N     ++ SP GRI R+        F + EG 
Sbjct: 180 TTESGLTVTRRISVDDNFMFTYEDTVENTGDAAVQVSPYGRIARYSKPEVAAAFVLFEGL 239

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNS--WLGISDKYWASVFIPSKETSFHSQFKYL 278
           + V G++ L E  YSDIE  +      S+   WLGI+DKYWA+  +P     F SQF Y 
Sbjct: 240 LGVFGEEGLDEVSYSDIEDDTRLRQPASSGGGWLGITDKYWATALVPEVGRDFESQFLYR 299

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
           ++G + YQ +F ++ ++I PG + +  N  FAGAKE   I+ YE+ L I +F  LIDWGW
Sbjct: 300 TNGRSHYQTEFVSDPVSIAPGAAASMVNRTFAGAKEVDKINAYEEQLNIRQFGQLIDWGW 359

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           FYFI +PMF  + Y Y LVGNFGIAI+  TV +KL+FFPLA K Y S A MK IQPK+ E
Sbjct: 360 FYFITRPMFTALDYIYRLVGNFGIAILAVTVILKLIFFPLANKSYKSMARMKTIQPKVME 419

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           LRE+FK    Q  Q+ M+QLY++  INP AGCWPIL+QIPVFFA+YKV+ +++EMRHAPF
Sbjct: 420 LRERFKD-DRQKQQQEMMQLYRSEKINPAAGCWPILIQIPVFFALYKVLYVTIEMRHAPF 478

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           +GWI+DLAA DPT+IF LFG+LP+ +PG + +G+WP++M L+MFIQM+++P P D  QAM
Sbjct: 479 FGWIQDLAAPDPTSIFNLFGLLPYDVPGILLIGVWPLLMGLTMFIQMRLNPTPPDPTQAM 538

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           I  WMPVVF F L++FPAGL+IYW+W+N +SI+QQ+VIMK +GA+I L D LR  F +  
Sbjct: 539 IFTWMPVVFTFMLATFPAGLVIYWTWNNFLSIIQQSVIMKRNGAKIELFDNLRGMFKRKE 598

Query: 579 N 579
            
Sbjct: 599 K 599


>gi|90419893|ref|ZP_01227802.1| putative inner membrane protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335934|gb|EAS49682.1| putative inner membrane protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 609

 Score =  477 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 264/607 (43%), Positives = 370/607 (60%), Gaps = 30/607 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ-----------TVKQPNQV 49
           M+ N N+ +A+ LS+ ++  WQ   V PR+E    E +  Q           T + P   
Sbjct: 1   MQNNRNFLIAMILSIGVLVGWQFLVVSPRMEAQRLETEAAQPTVAQNDGSLQTPQTPAGT 60

Query: 50  DNSYAAVLI----------------DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93
                A                   + R QA++   RV +  P+L GSINL GA+ DDL 
Sbjct: 61  PQDNVAAPAGRESVVPEQDALPATDETREQAIAAGSRVAIDTPALSGSINLTGARLDDLR 120

Query: 94  LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153
           L+ YH  V  +SP + LLSP    + YFAE  Y+      ELP  +T+W    G+ LTP 
Sbjct: 121 LKNYHETVDDSSPTIVLLSPERLPSGYFAEFGYLGRDAG-ELPGPSTIWQAEGGQSLTPN 179

Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213
           +P+ L   N   + FERTIS+D+ ++F   DT+ N     +  S  GR+ R+      + 
Sbjct: 180 SPVTLTATNGAGVTFERTISVDDRFMFTYEDTIRNEGSAPLTLSSYGRVTRYSKPEVASV 239

Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFH 272
           + + EG + V GD  L E KYS IE     +    S+ WLGI+DKYWA+  +P     F 
Sbjct: 240 YVLFEGLLGVFGDDGLSEIKYSTIEDDQRYTPPKSSSGWLGITDKYWATTLVPEAGRPFQ 299

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
           S+F Y++DG   YQ ++  + +T+ PG + T  +  FAGAK    I  YE+   I +F  
Sbjct: 300 SRFLYMTDGRPHYQTEYVTDPVTVEPGATATNVSRTFAGAKVVSDIDSYEERYDIRQFGQ 359

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           LIDWGWFYFI +PMF  + + Y+++GNFG+AI+  TV +KL+FFPLA K Y S A MKN+
Sbjct: 360 LIDWGWFYFITRPMFHALDWLYSVIGNFGVAILAVTVVLKLIFFPLANKSYKSMARMKNM 419

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QPKI E+RE+FK    Q  Q+ M+++Y+   INP AGCWPIL+QIPVFFA+YKV+ +++E
Sbjct: 420 QPKIMEMRERFKDDK-QKQQQEMMRIYREEKINPAAGCWPILIQIPVFFALYKVLYVTIE 478

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           MRHAPF+GWI+DLAA DPT+IF LFG++P  LP  + VG+WPI+M ++MF+QM+++P P 
Sbjct: 479 MRHAPFFGWIQDLAAPDPTSIFNLFGLIPLELPHLLMVGVWPILMGITMFVQMRLNPTPP 538

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  Q MI  WMPVVF F L+SFPAGL+IYW+W+N++S++QQ+VIMK +G +I L D LR 
Sbjct: 539 DPTQQMIFTWMPVVFTFMLASFPAGLVIYWTWNNLLSVIQQSVIMKRNGTKIELWDNLRG 598

Query: 573 TFSKNYN 579
            F +   
Sbjct: 599 MFRRKEK 605


>gi|239832645|ref|ZP_04680974.1| Inner membrane protein oxaA [Ochrobactrum intermedium LMG 3301]
 gi|239824912|gb|EEQ96480.1| Inner membrane protein oxaA [Ochrobactrum intermedium LMG 3301]
          Length = 624

 Score =  476 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 270/607 (44%), Positives = 378/607 (62%), Gaps = 29/607 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT----------------VK 44
           ME N N+F+ IALS++++  WQ FY+ P+ E    + +  +                   
Sbjct: 15  MENNRNFFITIALSILVLTLWQVFYLGPKSEAQREQARIEEQQQQKQQATQQQAQGSQNG 74

Query: 45  QPNQVDNSYAAVL----------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94
              Q+  +   V              R  A++ + R+E+  PSL GSINL GA+ DD+ L
Sbjct: 75  DTPQMPAASGNVPGHSDVAAGGGTLTREAAVAQTQRIEIDTPSLRGSINLTGARLDDIFL 134

Query: 95  RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154
           + YH  V +NSP + LL+PS  +  YF EL +        +P  NTVW +     LT T 
Sbjct: 135 KNYHETVDNNSPNIELLAPSPLQQGYFVELGFTGNETTGPVPGPNTVWTVEGNNRLTQTA 194

Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213
           P+ L + N  NI F+R IS+DE Y+F + DT+ NNS   I  +  GR+   ++P+ A+ T
Sbjct: 195 PVTLTYTNEKNITFKRIISVDESYMFSVEDTIVNNSGAPISLASYGRVTRFNQPEHASAT 254

Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
           + + EG I V+G   L E KYS   +   IS       WLGI+DKYWA+  IP ++  F 
Sbjct: 255 YVLHEGLIGVMGQDGLQEIKYSKIEDNKDISFKDVQGGWLGITDKYWAATLIPPQDEKFT 314

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
            +F + ++   RYQA F    +TI PG++ T  N +FAGAK    I +YE+ L I +FE+
Sbjct: 315 GRFSHFTNDRPRYQADFLGAPMTIAPGQTQTVKNHVFAGAKVVSLIKNYEETLGIKQFEL 374

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           LIDWGWFYFI KPMF L+ + Y   GNFG+AI++ TV +K LFFPLA K Y S A MK +
Sbjct: 375 LIDWGWFYFITKPMFYLIDWIYKFSGNFGVAILVVTVLLKGLFFPLANKSYKSMARMKLV 434

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QPK+ E+REK+        Q+ M++LYK   INPLAGCWP+L+QIPVFFA+YKV+ +++E
Sbjct: 435 QPKLTEIREKYADDK-MRQQQEMMKLYKEEKINPLAGCWPVLVQIPVFFALYKVLYVTIE 493

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           MRHAPF+GWI+DLAA DPT++F LFG+LPF +P F+ +G+WP++M ++MF+QM+M+P P 
Sbjct: 494 MRHAPFFGWIQDLAAPDPTSLFNLFGLLPFAVPHFLMIGVWPLLMGITMFLQMRMNPTPP 553

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  QA I  WMPV+F F L+SFPAGL+IYW+W+N++SI QQ +IMK  G +I L D L+S
Sbjct: 554 DPTQAAIFTWMPVIFTFMLASFPAGLVIYWAWNNLLSITQQGIIMKRQGVKIELFDNLKS 613

Query: 573 TFSKNYN 579
            F +   
Sbjct: 614 LFKRKPK 620


>gi|85717142|ref|ZP_01048101.1| putative inner membrane protein translocase component YidC
           [Nitrobacter sp. Nb-311A]
 gi|85696033|gb|EAQ33932.1| putative inner membrane protein translocase component YidC
           [Nitrobacter sp. Nb-311A]
          Length = 614

 Score =  476 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 240/606 (39%), Positives = 361/606 (59%), Gaps = 29/606 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI-----------QTVKQPNQV 49
           M  N N  +AI LS +++ AWQ FY  P++E+    ++             +        
Sbjct: 1   MSENRNTIIAIVLSALVLIAWQYFYNIPQMEKDRAAQQAQSELAKSQKESSEAAPNSPTP 60

Query: 50  DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
               A   +  R  A++  PRV++  P L GS++L GA+ DDL L  Y   V   SP + 
Sbjct: 61  GQPAAKSAVVARDVAIASKPRVKIHTPRLSGSLSLTGARIDDLLLTKYRETVDPASPAIE 120

Query: 110 LLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
           L SPS T N Y+AE  +V  T + + +P+ +T W       LT +TP+ L + N   + F
Sbjct: 121 LFSPSGTANPYYAEFGWVPATGSTVRVPDRDTPWQQEGSGALTESTPVTLKYDNGEGLTF 180

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
            RTIS+D+ YLF I D V+N     +   P   I RH     +  + + EG I  LGD+ 
Sbjct: 181 RRTISVDDQYLFTIKDEVSNTGSAPVTLYPFALISRHGTPQVSGYYILHEGLIGYLGDQK 240

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQA 287
           L E  Y  I+++   +F  +N WLGI+DKYWA+  +P       ++F     G  + YQ 
Sbjct: 241 LQEYSYKKIDEAKSVSFDVTNGWLGITDKYWAAALLPDTSARLQARFSSDQAGSVKTYQT 300

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYEKDLAIPRFEMLIDWGW 338
            +  +  TI  G + + +  LFAGAKE            +  Y K L +  F++LIDWGW
Sbjct: 301 DYLEDARTIPAGGTGSLSTRLFAGAKEAGVVGLNFPLVELGGYNKQLGLNHFDLLIDWGW 360

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           FYFI KPMF+ + +F+++ GNFG+AI++ TV +KL+FFPLA + Y S A MK +QP+I  
Sbjct: 361 FYFITKPMFLALDFFFHVFGNFGVAILVVTVLIKLVFFPLANRSYASMAKMKAVQPQITA 420

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L+E++     + LQ+ M+++YK   INP++GC P+LLQIPVFF++YKV+ +++EMRHAPF
Sbjct: 421 LKEQYPDDRMK-LQQEMMEIYKKEKINPISGCLPMLLQIPVFFSLYKVLFVTIEMRHAPF 479

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPA 512
           + WIKDL+A DPT+IF LFG+LP+          ++ +G WPIIM ++M+ QMK++P P 
Sbjct: 480 FAWIKDLSAPDPTHIFNLFGLLPYDPSVVPLLGPYLAIGAWPIIMGITMWFQMKLNPTPP 539

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  Q +I +WMPV+F F L++FPAGL+IYW+W+N +S++QQ+ IM+ +G ++ L D ++S
Sbjct: 540 DPTQKIIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVIQQSYIMRRNGVKVELFDNVKS 599

Query: 573 TFSKNY 578
           TF +  
Sbjct: 600 TFRRKP 605


>gi|307301342|ref|ZP_07581104.1| YidC/Oxa1 family domain containing membrane protein insertase
           [Sinorhizobium meliloti BL225C]
 gi|307318012|ref|ZP_07597449.1| YidC/Oxa1 family domain containing membrane protein insertase
           [Sinorhizobium meliloti AK83]
 gi|38503127|sp|Q92SF5|OXAA_RHIME RecName: Full=Inner membrane protein oxaA
 gi|306896414|gb|EFN27163.1| YidC/Oxa1 family domain containing membrane protein insertase
           [Sinorhizobium meliloti AK83]
 gi|306903798|gb|EFN34385.1| YidC/Oxa1 family domain containing membrane protein insertase
           [Sinorhizobium meliloti BL225C]
          Length = 594

 Score =  476 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 289/592 (48%), Positives = 392/592 (66%), Gaps = 14/592 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN------------NERKNIQTVKQPNQ 48
           ME N NYFVAIALSV+I+ AWQ FYV P++E+               ++   Q       
Sbjct: 1   MENNRNYFVAIALSVLILIAWQFFYVSPKMEKDRIAAEQAQQAQQTQQQPGAQPAAPGQA 60

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
           +         + R QA+  S RV +  P+L GSINL GA+FDDL L+GY   V   SP++
Sbjct: 61  LPGGAIPSAGESRDQAIGKSARVAIDTPALSGSINLTGARFDDLKLKGYRETVDPKSPVI 120

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
           TL SP+ T + YF E+ Y+ +     +P   T W L  G  LTP+TP+ L + N   I F
Sbjct: 121 TLFSPAETADGYFTEIGYIGSDATGSVPGPQTTWTLSGGDKLTPSTPVTLSYTNDKGITF 180

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
            RTIS+D+ Y+F++VD++ N +   +  S  GR+ R    T  + + + EGF+ V G+  
Sbjct: 181 ARTISVDDRYMFQVVDSIKNETAAPVSLSSYGRVTRFNKPTTPSIYVLHEGFVGVAGEHG 240

Query: 229 LVEQKYSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
           L E  YS +E        +S   WLGI+DKYWA+  +P + T F  +F + +DG  RYQ+
Sbjct: 241 LQEVGYSKVEDDEPVEPGKSTGGWLGITDKYWAATIVPPQATPFDIRFSHFADGRPRYQS 300

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + ++ +T+ PG+S+   N +FAGAKE P + +YE   +IP F+ LIDWGWFYFI KPMF
Sbjct: 301 DYKSDAVTVAPGQSVELKNLVFAGAKEVPVVDNYEVAYSIPNFDKLIDWGWFYFITKPMF 360

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            +M +F+ L GNFGIAI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF    
Sbjct: 361 KMMDFFFRLFGNFGIAILITTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGD-D 419

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
              LQ+AM+QLYK   INPLAGCWPIL+QIPVFFA+YKVI +++EMRHAPF+GWI+DL+A
Sbjct: 420 RMGLQQAMMQLYKEEKINPLAGCWPILIQIPVFFALYKVIYVTIEMRHAPFFGWIQDLSA 479

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527
            DPT I  LFG+LPF  P F+H+GIWPIIM ++MF+QM+M+P P D  QAM+  WMPVVF
Sbjct: 480 PDPTTIINLFGLLPFEGPAFLHLGIWPIIMGVTMFLQMRMNPTPPDPTQAMLFTWMPVVF 539

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
            F L+SFPAGL+IYW+W+N +SI+QQ +IMK  G ++ L D L+S FSK   
Sbjct: 540 TFMLASFPAGLVIYWAWNNTLSILQQGIIMKRQGVKVELFDNLKSLFSKKPK 591


>gi|298290371|ref|YP_003692310.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Starkeya novella DSM 506]
 gi|296926882|gb|ADH87691.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Starkeya novella DSM 506]
          Length = 609

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 242/605 (40%), Positives = 361/605 (59%), Gaps = 27/605 (4%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEE------------------MNNERKNIQTVK 44
            N N  +AI LS+ ++ AWQ F   P++E+                   + E        
Sbjct: 4   ENRNMIIAIVLSMAVLIAWQYFSGIPQMEQQRQQHAAQQQAAQQQAAQPSGEAGTAAPAP 63

Query: 45  QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
             +    +  A     RA+AL+ SPR  +  P +IGS+ LKG + DDL+L+ Y   V  N
Sbjct: 64  GTSAPAPAGTAPKALTRAEALARSPRAVIDTPRVIGSVALKGGRIDDLSLKDYRETVDPN 123

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
           SPI+ LLSPS   N ++AE  +V  A  ++++PN+ T+W    G  LT   P+ L + N 
Sbjct: 124 SPIIVLLSPSGGPNPFYAEFGWVPGAGASVQVPNAETLWTAPEGAKLTHEAPLVLSWDNG 183

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
             ++F RT+S+D +Y+F +VD V N +   +   P G + RH        + + EG I V
Sbjct: 184 AGLIFRRTLSIDANYMFHVVDEVENTTAAPVALHPYGLVSRHGTPHVLGYYILHEGLIGV 243

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
             +  L E KY DI +     F     WLGI+DKYWA+  IP  +    ++F     G+ 
Sbjct: 244 TSEAGLHEIKYKDIAERKTETFPSVGGWLGITDKYWAATVIPGIQEKVQARFSAAQAGND 303

Query: 284 -RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             YQ  F  + +++ PG   +T   LFAGAKE   +  Y+    I RF++LIDWGWFYFI
Sbjct: 304 FSYQTDFLGDAVSVAPGAKASTEGRLFAGAKEVRVVDGYQSTYNIDRFDLLIDWGWFYFI 363

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            KP+F+++ + Y  VGNFG+AI++ TV +K++FFPLA K Y S A MK +QP+I  LRE+
Sbjct: 364 TKPLFLVIDWIYKGVGNFGVAILIVTVMLKIVFFPLANKSYASMAKMKAVQPEITALRER 423

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +     + LQ+ M+++YK   INP+AGC PI++QIPVFFA+YKV+ +++EMRHAPF+GWI
Sbjct: 424 YGDDRVK-LQQEMMEIYKKEKINPVAGCLPIVIQIPVFFALYKVLFVTIEMRHAPFFGWI 482

Query: 463 KDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           KDL+A DPT IF LFG++P+          F+ +G+WPIIM ++M+ QMK++P P D  Q
Sbjct: 483 KDLSAPDPTTIFNLFGLIPWDPGQVPVIGHFLLLGVWPIIMGITMWAQMKLNPAPPDPTQ 542

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
             I +WMP++F F L SF +GL+IYW+W+N +S++QQ++IM+ +G +I L D ++  F +
Sbjct: 543 KAIFDWMPLIFTFMLGSFASGLVIYWAWNNTLSVIQQSIIMRRNGVKIELWDNVKELFGR 602

Query: 577 NYNSQ 581
               +
Sbjct: 603 KKKPK 607


>gi|170749903|ref|YP_001756163.1| 60 kDa inner membrane insertion protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|254773004|sp|B1LTW1|OXAA_METRJ RecName: Full=Inner membrane protein oxaA
 gi|170656425|gb|ACB25480.1| 60 kDa inner membrane insertion protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 617

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 254/612 (41%), Positives = 365/612 (59%), Gaps = 35/612 (5%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN-ERKNIQTVKQPNQVDNSYAAVLID- 59
               N FVAI LS++++  WQ F   PR+E+    E +N    +QP  V           
Sbjct: 3   NDKTNMFVAIGLSLLVLLGWQYFVAGPRMEQQRQIEAQNKAAQQQPPGVTPDGVPSPSPK 62

Query: 60  --------------------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99
                                R  AL+ SPRV ++ P+L GSI LKG + DD++L+ YH 
Sbjct: 63  EGGPAAPAPGTLPTAQGGPVSREAALARSPRVRIETPALSGSIALKGGRVDDVSLKNYHE 122

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159
            +   SP + L SP+ T+  Y+AE  +V       LP ++T+W    GK L+P  P+ L 
Sbjct: 123 TIDPKSPEIVLFSPAGTETPYYAEFGWVGANAGP-LPTNDTLWT-SDGKTLSPGMPVTLT 180

Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
           + N   ++F+R I++D+ Y+F I D V N     I   P   + R         + + EG
Sbjct: 181 WDNGAGLVFKRIIAVDDKYMFTIRDEVENKGSGAITLYPYSLVSRWGKPHTQGYYVLHEG 240

Query: 220 FIAVLGDKSLVEQKYSD---------IEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270
            I  LG+  L E  Y                 +    +  ++GI+DKYWA+  IP ++T 
Sbjct: 241 MIGYLGNDGLQEFTYDKLAKEGAYGGANTKGKAWTGVTGGFVGITDKYWAAAAIPDQDTP 300

Query: 271 FHSQFKYLSDG-HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329
           +   F   +DG    YQA    + + +  G S T T  LFAGAKE   I++YEKDL I  
Sbjct: 301 YTGAFTDRTDGATNVYQASVRGDAVNLAAGASATATQRLFAGAKEVNVINNYEKDLGIKH 360

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F+++IDWGWF+FI KPMF  + +FY+L GNFG++I++ T  +KLLF P+A + YVS A M
Sbjct: 361 FDLMIDWGWFFFITKPMFRALDFFYHLFGNFGVSILVVTFCLKLLFLPIANRSYVSMAKM 420

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           K +QP++  +RE++K    +  Q+A ++LYK   INP+AGCWP+L+QIPVFFA+YKV+ I
Sbjct: 421 KAVQPEMAAIRERYKDDRMK-QQQATMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFI 479

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           ++EMRHAPF+GWI+DLAA DPT+I  LFG+LPF  P F+H+G+WPIIM ++MF+QMKM+P
Sbjct: 480 TIEMRHAPFFGWIRDLAAPDPTSIVNLFGLLPFPAPDFVHLGVWPIIMGITMFVQMKMNP 539

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            P D  QA I  +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D 
Sbjct: 540 APPDPVQAQIFTFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWDN 599

Query: 570 LRSTFSKNYNSQ 581
           LRSTF +   ++
Sbjct: 600 LRSTFRRGNGTK 611


>gi|327192535|gb|EGE59487.1| inner membrane transmembrane protein [Rhizobium etli CNPAF512]
          Length = 597

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 291/593 (49%), Positives = 390/593 (65%), Gaps = 17/593 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----------------ERKNIQTVK 44
           ME N NYF+AIALSV+IV  WQ  Y+ PRIE                          T  
Sbjct: 1   MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGATPA 60

Query: 45  QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
             +    S  AV      QAL+ +PRV +  P+L GSINL GA+ DDL L+GYH  V  +
Sbjct: 61  PTSGTAPSGQAVATATLEQALAKTPRVAIDTPALSGSINLAGARLDDLKLKGYHETVDDS 120

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
           SPI+TL SP+ TK+ YF EL Y+ +     +P ++T+W    G  LT  TP+ L + N  
Sbjct: 121 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGASTLWTAPEGAKLTEKTPVTLSYTNDK 180

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
            + F RTIS+DE Y+F I D V N     +  S  GR+ R+   T  + + + EGFI V+
Sbjct: 181 GLTFTRTISVDERYMFTIADKVANTGQAPVSLSSYGRVTRYNKPTTPSAYVLHEGFIGVI 240

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
           GD  L+E KY+ +EK ++     +  WLGI+DKYWA+  +P + +++ ++F + +DG  R
Sbjct: 241 GDDGLIESKYTAVEKEAVMPAKSTGGWLGITDKYWAATIVPPQASAYEARFSHFADGQPR 300

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           YQA +  +  TI PG+SI   N +FAGAKE P I  YE   +IPRF+ LIDWGWFYFI K
Sbjct: 301 YQADYKDDAFTIAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPRFDRLIDWGWFYFITK 360

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           PMF LM +F+   GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF 
Sbjct: 361 PMFKLMDFFFRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFG 420

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                 LQ+A +QLYK   INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWI+D
Sbjct: 421 D-DRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIQD 479

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+A DPT I  LFG+LPF  P F+H+G+WP+IM ++MF+QM+M+P P D  QAMI NWMP
Sbjct: 480 LSAPDPTTIVNLFGLLPFTAPTFLHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFNWMP 539

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK HG +I L D L+  F + 
Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRHGVKIELFDNLKGLFRRK 592


>gi|15964197|ref|NP_384550.1| putative inner membrane protein translocase component YidC
           [Sinorhizobium meliloti 1021]
 gi|15073373|emb|CAC41881.1| Putative inner-membrane transmembrane protein [Sinorhizobium
           meliloti 1021]
          Length = 595

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 289/592 (48%), Positives = 392/592 (66%), Gaps = 14/592 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN------------NERKNIQTVKQPNQ 48
           ME N NYFVAIALSV+I+ AWQ FYV P++E+               ++   Q       
Sbjct: 2   MENNRNYFVAIALSVLILIAWQFFYVSPKMEKDRIAAEQAQQAQQTQQQPGAQPAAPGQA 61

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
           +         + R QA+  S RV +  P+L GSINL GA+FDDL L+GY   V   SP++
Sbjct: 62  LPGGAIPSAGESRDQAIGKSARVAIDTPALSGSINLTGARFDDLKLKGYRETVDPKSPVI 121

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
           TL SP+ T + YF E+ Y+ +     +P   T W L  G  LTP+TP+ L + N   I F
Sbjct: 122 TLFSPAETADGYFTEIGYIGSDATGSVPGPQTTWTLSGGDKLTPSTPVTLSYTNDKGITF 181

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
            RTIS+D+ Y+F++VD++ N +   +  S  GR+ R    T  + + + EGF+ V G+  
Sbjct: 182 ARTISVDDRYMFQVVDSIKNETAAPVSLSSYGRVTRFNKPTTPSIYVLHEGFVGVAGEHG 241

Query: 229 LVEQKYSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
           L E  YS +E        +S   WLGI+DKYWA+  +P + T F  +F + +DG  RYQ+
Sbjct: 242 LQEVGYSKVEDDEPVEPGKSTGGWLGITDKYWAATIVPPQATPFDIRFSHFADGRPRYQS 301

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + ++ +T+ PG+S+   N +FAGAKE P + +YE   +IP F+ LIDWGWFYFI KPMF
Sbjct: 302 DYKSDAVTVAPGQSVELKNLVFAGAKEVPVVDNYEVAYSIPNFDKLIDWGWFYFITKPMF 361

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            +M +F+ L GNFGIAI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF    
Sbjct: 362 KMMDFFFRLFGNFGIAILITTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGD-D 420

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
              LQ+AM+QLYK   INPLAGCWPIL+QIPVFFA+YKVI +++EMRHAPF+GWI+DL+A
Sbjct: 421 RMGLQQAMMQLYKEEKINPLAGCWPILIQIPVFFALYKVIYVTIEMRHAPFFGWIQDLSA 480

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527
            DPT I  LFG+LPF  P F+H+GIWPIIM ++MF+QM+M+P P D  QAM+  WMPVVF
Sbjct: 481 PDPTTIINLFGLLPFEGPAFLHLGIWPIIMGVTMFLQMRMNPTPPDPTQAMLFTWMPVVF 540

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
            F L+SFPAGL+IYW+W+N +SI+QQ +IMK  G ++ L D L+S FSK   
Sbjct: 541 TFMLASFPAGLVIYWAWNNTLSILQQGIIMKRQGVKVELFDNLKSLFSKKPK 592


>gi|222084728|ref|YP_002543257.1| preprotein translocase 60 kD membrane subunit [Agrobacterium
           radiobacter K84]
 gi|221722176|gb|ACM25332.1| preprotein translocase 60 kD membrane subunit [Agrobacterium
           radiobacter K84]
          Length = 600

 Score =  473 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 285/598 (47%), Positives = 393/598 (65%), Gaps = 20/598 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN-------------------NERKNIQ 41
           ME   NYF+AIALSV+IV AWQ FY+ PR+E                      N      
Sbjct: 1   MENKRNYFIAIALSVLIVLAWQFFYMNPRLEAQRKAEQAAKLQQQTQQAQTTQNPAAGAT 60

Query: 42  TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
                     S    L  D++ A S + RV +  P+L GSINL+GA+FDDL L+ YH  V
Sbjct: 61  VDGAAPSSGQSAPTTLTHDQSVAKSAASRVAIDTPALSGSINLEGARFDDLQLKAYHETV 120

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161
             +SPI+TL SP++TK+ YF EL YV +     +P  +TVW L SG  LT +TP+ L + 
Sbjct: 121 DKSSPIITLFSPADTKDGYFTELGYVGSDATGAVPGPSTVWTLASGSKLTDSTPVTLSYT 180

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
           N   I F RT+S+DE Y+F I D + N+    +  S  GR+ R+   T  + + + EGFI
Sbjct: 181 NDKGITFTRTVSVDERYMFTITDKIANSGQAPVSLSSYGRVTRYNKPTTPSAYVLHEGFI 240

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281
            V+GD  L+E KY+  EK +++    +  WLGI+DKYWA+  +P +  ++ + F + +DG
Sbjct: 241 GVIGDDGLIETKYTAAEKEAVNPAKATGGWLGITDKYWAATIVPPQSGAYDAHFSHFADG 300

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
             RYQA +  + +T+ PG+S    + +FAGAKE P I  YE   +IP+F+ LIDWGWFYF
Sbjct: 301 QPRYQADYKQDAVTVAPGQSQELKSLVFAGAKEVPVIDRYETSYSIPKFDRLIDWGWFYF 360

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           I KPMF LM +F+   GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ 
Sbjct: 361 ITKPMFKLMDFFFRYFGNFGVAILCTTIVVKGLFFPLASKQYASMANMKRMQPKMEELKA 420

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           KF       LQ+A +QLYK   INP+AGCWP+LLQIP+FF++YKVI I++EMRHAPF+GW
Sbjct: 421 KFGD-DRMGLQQATMQLYKEEKINPIAGCWPVLLQIPIFFSLYKVIYITIEMRHAPFFGW 479

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
           I+DL+A DPT+I  LFG+LPF  P  +H+G+WP+IM ++MF+QM+M+P P D  QAMI N
Sbjct: 480 IQDLSAPDPTSIVNLFGLLPFTAPTILHLGVWPLIMGITMFLQMRMNPTPPDPTQAMIFN 539

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           WMP+VF+F L+SFPAGL+IYW+W+N +S++QQ++IMK HG ++ L D ++  F +   
Sbjct: 540 WMPLVFMFMLASFPAGLVIYWAWNNTLSVIQQSIIMKRHGVKVELFDNMKGLFKRKPA 597


>gi|163757863|ref|ZP_02164952.1| putative inner membrane protein translocase component YidC [Hoeflea
           phototrophica DFL-43]
 gi|162285365|gb|EDQ35647.1| putative inner membrane protein translocase component YidC [Hoeflea
           phototrophica DFL-43]
          Length = 605

 Score =  473 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 268/604 (44%), Positives = 379/604 (62%), Gaps = 26/604 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE------------------------EMNNE 36
           ME N NYFVAI LSV+++  WQ  YV P+IE                             
Sbjct: 1   METNRNYFVAILLSVLVLIGWQYLYVSPKIEREREAAQALQAEQAATQPGATGAGTTTPG 60

Query: 37  RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96
             +         +    A      R  AL+ S R+ +  P+L GSINL GA+ DDL L  
Sbjct: 61  AVSGSAPGGETAMPGVVAPETGLSREDALAQSERIAIDTPALSGSINLTGARIDDLLLSE 120

Query: 97  YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156
           Y   +   SP + L SP+   + YFAE+ +++ A++   P  +TVW+   G+ LT  +P+
Sbjct: 121 YRETIDPESPNIRLFSPAQQADGYFAEVGFIADADSGPAPGPDTVWSAAPGQTLTQGSPV 180

Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216
            L + N   +LF R IS+D+H+LF+  DT++N+S      +  GR+ R         + +
Sbjct: 181 TLTYDNGAGLLFTRKISVDDHFLFQFEDTISNSSSQTASVAGYGRVTRFFRPQTAGIYVL 240

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSI-SNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275
            EG I V+G++ L E  YSD+E++ I +    +  W+GI+DKYWA+  +P +   F ++F
Sbjct: 241 HEGLIGVIGEEGLQEIDYSDVEETPILAQPKATAGWMGITDKYWAAALVPPQGAGFDTRF 300

Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
            + +DG ARYQA F  +   I  G S+T+T  +FAGAKE P I  YE    I  F+++ID
Sbjct: 301 AHFTDGRARYQADFRTDAQAIAAGGSVTSTTLVFAGAKEVPIIEGYESQFNILNFDLMID 360

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           WGWFYFI KPMF ++ + + L+GNFG+AI+ TTV VKL+FFPLA K YVS ANMK +QPK
Sbjct: 361 WGWFYFITKPMFWMIDFLFKLLGNFGLAILATTVIVKLIFFPLANKSYVSMANMKKVQPK 420

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           ++EL+ K        LQ+ M++LYK   INP+AGCWP+LLQIPVFFA+YKV+ +++EMRH
Sbjct: 421 LEELKAKHGD-DRMALQQGMMELYKKEKINPVAGCWPVLLQIPVFFALYKVLYVTIEMRH 479

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           APF+GWI+DL+A DPT++F LFG+LP+ +PGF+ +G+WP+IM ++MF+QM+M+P P D  
Sbjct: 480 APFFGWIQDLSAPDPTSLFNLFGLLPYDVPGFLLIGVWPLIMGITMFLQMRMNPTPPDPT 539

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
           QAMI  WMPVVF F L++FPAGL+IYW+W+N +SI+QQ  IMK  GA+I L D L + F 
Sbjct: 540 QAMIFTWMPVVFTFMLATFPAGLVIYWAWNNTLSILQQGFIMKRQGAKIELWDNLMALFK 599

Query: 576 KNYN 579
               
Sbjct: 600 PKDK 603


>gi|188581560|ref|YP_001925005.1| 60 kDa inner membrane insertion protein [Methylobacterium populi
           BJ001]
 gi|254773003|sp|B1Z8E7|OXAA_METPB RecName: Full=Inner membrane protein oxaA
 gi|179345058|gb|ACB80470.1| 60 kDa inner membrane insertion protein [Methylobacterium populi
           BJ001]
          Length = 614

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 250/610 (40%), Positives = 363/610 (59%), Gaps = 34/610 (5%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-RKNIQTVKQPNQVDNSYAAVL--- 57
               N FVAIALS++++  W  F   P  E      +        P   D   +      
Sbjct: 3   NDKTNMFVAIALSLVVLLGWHYFVTGPASERQRQAVQSQTAQNTAPQSADGIPSPSPREG 62

Query: 58  -----------------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
                               R  AL+ S RV +  P+L GSI LKGA+ DD++L+ YH  
Sbjct: 63  SPNAPVPGTVPGAAAQGPISREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHET 122

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
           VS  SP + LLSP+ + N Y+AE  +V       LPN +T+W    G +L P  P+ L +
Sbjct: 123 VSDESPRIVLLSPAGSANPYYAEFGWVGANAGP-LPNGDTLWK-ADGDLLAPGKPLTLTW 180

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
            N   +LF+R +++D+ ++F + D V N+S + +   P   + R         + + EG 
Sbjct: 181 DNGQGLLFKRIVAVDDKFMFTVRDEVENSSANPVTLYPYSLVSRWGKPQTQGYYVLHEGL 240

Query: 221 IAVLGDKSLVEQKYSDIEKSS---------ISNFHESNSWLGISDKYWASVFIPSKETSF 271
           I VLG   L E  Y  + K            +  + +  W+GI+DKYWA+  IP ++  F
Sbjct: 241 IGVLGSDGLQEYTYDKVGKEPAYGGAATQGKAWSNVTGGWVGITDKYWAAAAIPDQDKPF 300

Query: 272 HSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
              F   +DG  + YQ     + +T+ P  S  TT  LFAGAKE   I+ YE+DL I +F
Sbjct: 301 TGAFTERTDGATKIYQTSVRGDAVTVAPSASSATTQRLFAGAKEVNQINAYERDLGIKQF 360

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           +++IDWGWF+F+ KPMF  + +FY+L+GNFG++I+L T+ +K+ F P+A + YVS A MK
Sbjct: 361 DLMIDWGWFWFLTKPMFRALDFFYHLLGNFGVSILLVTLILKIFFLPIANRSYVSMAKMK 420

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            +QP++  +RE++K    +  Q+AM++LYK   INP+AGCWP+L+QIPVFFA+YKV+ I+
Sbjct: 421 AVQPEMTSIRERYKDDRTK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFIT 479

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +EMRHAPF+GWI DLAA DPT+I  LFG+LPF  P F+H+G+WPIIM ++MFIQMKM+P 
Sbjct: 480 IEMRHAPFFGWIHDLAAPDPTSIMNLFGLLPFAAPDFIHLGVWPIIMGITMFIQMKMNPA 539

Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
           P D  QA +  +MP+VF F L SFPAGL+IYW+W+N +S++QQ +IM+ +G ++ L D L
Sbjct: 540 PPDPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYIIMRRNGVKVELWDNL 599

Query: 571 RSTFSKNYNS 580
           R  F +   S
Sbjct: 600 RGMFKRGNKS 609


>gi|126734531|ref|ZP_01750277.1| inner membrane protein oxaA, putative [Roseobacter sp. CCS2]
 gi|126715086|gb|EBA11951.1| inner membrane protein oxaA, putative [Roseobacter sp. CCS2]
          Length = 607

 Score =  472 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 206/595 (34%), Positives = 326/595 (54%), Gaps = 21/595 (3%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYP--RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           ++N N  +A  LS  ++ AW   +      ++      + +     P     + AA    
Sbjct: 3   DQNKNLILATVLSFAVIVAWTTLFPPEDLPVDPATETAQTLDDPTLPAADPVNPAATTPT 62

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
           +  +  + +PRV ++     GSI+L+G + DDL L  Y   +  ++ +V LL P     A
Sbjct: 63  EAPEPAADAPRVAIETGEFSGSISLQGGRIDDLALTNYRETIDEDAEVVRLLKPVGEPGA 122

Query: 120 YFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
           YFA   + +T       +P  +T+W L SG  LTP +P+ L + N    +F   I++D+ 
Sbjct: 123 YFASFGWTATDGIDASAVPGPDTIWALESGDTLTPNSPVTLSWDNGAGQIFRTEIAVDDA 182

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           ++F    +V N +   I   P G + RH        F +    +  + D  L E  Y DI
Sbjct: 183 FMFTFAQSVENATSTAISARPYGLLRRHGEPDDLKNFFILHEGMVRMTDGELEETGYDDI 242

Query: 238 EKSSISNFHESN---------SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
            + ++     +           W+G +D YW +  IP +   F S  KY  D    YQA+
Sbjct: 243 TEYAVDPRERTQAERLDVSESGWIGYTDHYWMTTLIPEQGVPFRSTSKYF-DVRDLYQAE 301

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                 T+  G++ T T  LFAGAKE+  I +YE +  +  F   IDWGWF+F+ KP+F 
Sbjct: 302 AVMPIETVAAGETATVTTRLFAGAKEWEAIRNYENEGGVGGFLDSIDWGWFFFLTKPIFA 361

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+ Y    +GN G +I+  TV +K++  PLA K YVS A MK +QP++++L+E+      
Sbjct: 362 LLHYLNIFIGNMGWSILALTVILKIIVLPLAYKSYVSMAKMKELQPEMEKLKERTGDDK- 420

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q +Q+ M++LYK + +NP AGC PILLQIP+FF++YKVI +++E+RHAP+ GWI+DL+A 
Sbjct: 421 QAMQQGMMKLYKDNKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPWIGWIRDLSAP 480

Query: 469 DPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
           DP++   LFG+LP+  P        + +GI PI++ +SM++Q K++P P D  Q MI  W
Sbjct: 481 DPSSFINLFGLLPYAAPEPGSILALIFIGILPILLGVSMWLQQKLNPAPTDPTQQMIFAW 540

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           MP VF+F L SF +GL++YW  +NVI+ +QQ  IM+ HGA+  +   ++++  K 
Sbjct: 541 MPWVFMFMLGSFASGLVLYWIANNVITFIQQYAIMRSHGAKPDVFGNIKASLKKR 595


>gi|75677253|ref|YP_319674.1| putative inner membrane protein translocase component YidC
           [Nitrobacter winogradskyi Nb-255]
 gi|74422123|gb|ABA06322.1| protein translocase subunit yidC [Nitrobacter winogradskyi Nb-255]
          Length = 614

 Score =  472 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 244/610 (40%), Positives = 367/610 (60%), Gaps = 30/610 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM------------NNERKNIQTVKQPNQ 48
           M  N N  +AI LS +++ AWQ FY  P++E+             +  +   +       
Sbjct: 1   MSENRNTIIAIVLSALVLIAWQYFYNIPQMEKDRAAHQAQSELAKSQSKSQGEAAPNTAA 60

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
              S A   +  R  A++  PRV++  P L GSI+L GA+ DDL L  Y   V+  SP +
Sbjct: 61  PGQSAAGSAVVARDVAIASKPRVQINTPRLSGSISLTGARIDDLLLTKYRETVNPASPAI 120

Query: 109 TLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167
            L SPS T + Y+AE  +V  T + + +P+ +T+W       LTP+TP+ L + N   + 
Sbjct: 121 ELFSPSGTASPYYAEFGWVPGTGSTVRVPDRSTLWQQEGAGALTPSTPVTLKYDNGEGLT 180

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227
           F RT+S+D+ YLF I D VTN     +   P   I RH     +  + + EG I  LGD+
Sbjct: 181 FRRTVSVDDQYLFTIKDEVTNTGSAPVTLYPFALISRHGTPEISGYYILHEGLIGYLGDQ 240

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQ 286
            L E  Y +I+++    F+ +N WLGI+DKYWA+  +P       ++F     G  R YQ
Sbjct: 241 KLQEYSYKNIDEAGSVTFNVTNGWLGITDKYWAAALLPDTSARLQARFSSDQAGAVRTYQ 300

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKE---------FPTIHHYEKDLAIPRFEMLIDWG 337
             +  +  TI  G +   +  LFAGAKE            +  Y K L +  F++LIDWG
Sbjct: 301 TDYLEDARTIPAGGTGAVSTRLFAGAKEAGVVGLNFPLAELGGYNKQLGLNHFDLLIDWG 360

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           WFYFI KPMF+ + +F+++ GNFG++I++ TV +KL+FFPLA + Y S A MK IQP+I+
Sbjct: 361 WFYFITKPMFLALDFFFHVFGNFGVSILVVTVLIKLVFFPLANRSYASMAKMKAIQPQIN 420

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
            LRE +     + LQ+ M+++YK   INP++GC P+LLQIPVFF++YKV+ +++EMRHAP
Sbjct: 421 ALRELYPDDRMK-LQQEMMEIYKKEKINPISGCLPVLLQIPVFFSLYKVLFVTIEMRHAP 479

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPP 511
           F+ WIKDL+A DPT+IF LFG+LP+          ++ +G WPIIM ++M+ QMK++P P
Sbjct: 480 FFAWIKDLSAPDPTHIFNLFGLLPYDPSVVPLIGPYLAIGAWPIIMGVTMWFQMKLNPTP 539

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
            D  Q +I +WMPV+F F L++FPAGL+IYW+W+N +S++QQ+ IM+ +G ++ L D ++
Sbjct: 540 PDPTQKIIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVIQQSYIMRRNGVKVELFDNVK 599

Query: 572 STFSKNYNSQ 581
           STF +  + +
Sbjct: 600 STFRRKSSDK 609


>gi|240138939|ref|YP_002963414.1| transmembrane protein, OxaA-like, preprotein translocase component
           [Methylobacterium extorquens AM1]
 gi|240008911|gb|ACS40137.1| transmembrane protein, OxaA-like, preprotein translocase component
           [Methylobacterium extorquens AM1]
          Length = 637

 Score =  472 bits (1213), Expect = e-130,   Method: Composition-based stats.
 Identities = 245/612 (40%), Positives = 363/612 (59%), Gaps = 36/612 (5%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI--- 58
               N FVAIALS++++  W  F   P  E      ++        Q  +   +      
Sbjct: 24  NDKTNMFVAIALSLVVLLGWHYFVTGPASERQRQAAQSQTAQTGAPQTADGIPSPSPREG 83

Query: 59  ------------------DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
                               R  AL+ S RV +  P+L GSI LKGA+ DD++L+ YH  
Sbjct: 84  SPNAPAPGTLPGAGALGPVSREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHET 143

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
           VS  SP + LLSP+ + N Y+AE  +V       LPN++T+W    G +L P  P+ L +
Sbjct: 144 VSDESPRIVLLSPTGSANPYYAEFGWVGANAGP-LPNADTLWK-ADGDLLAPGRPLTLTW 201

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
            N   ++F+R +++D+ ++F + D V N S + +   P   + R         + + EG 
Sbjct: 202 DNGQGLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQTQGYYVLHEGL 261

Query: 221 IAVLGDKSLVEQKYSDIEKSS---------ISNFHESNSWLGISDKYWASVFIPSKETSF 271
           I VLG   L E  Y  + K            +  + +  W+GI+DKYWA+  IP ++  F
Sbjct: 262 IGVLGGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKPF 321

Query: 272 HSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
              F   +DG  + YQ     + +T+ P  S  TT  LFAGAKE   I+ YE++  I +F
Sbjct: 322 TGAFTERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNQINAYEREFGIKQF 381

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           +++IDWGWF+F+ KPMF  + +F++L+GNFG++I+L T+ +KL F P+A + YVS A MK
Sbjct: 382 DLMIDWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKMK 441

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            +QP++  +RE++K    +  Q+AM++LYK   INP+AGCWP+L+QIPVFFA+YKV+ I+
Sbjct: 442 AVQPEMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFIT 500

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV--GIWPIIMSLSMFIQMKMS 508
           +EMRHAPF+GWI+DLAA DPT+I  LFG+LPF  P ++ +  G+WPIIM ++MFIQMKM+
Sbjct: 501 IEMRHAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKMN 560

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
           P P D  QA +  +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D
Sbjct: 561 PAPPDPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWD 620

Query: 569 RLRSTFSKNYNS 580
            LR  F +   S
Sbjct: 621 NLRGMFKRGNKS 632


>gi|316932100|ref|YP_004107082.1| membrane protein insertase [Rhodopseudomonas palustris DX-1]
 gi|315599814|gb|ADU42349.1| membrane protein insertase, YidC/Oxa1 family [Rhodopseudomonas
           palustris DX-1]
          Length = 625

 Score =  471 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 240/615 (39%), Positives = 350/615 (56%), Gaps = 46/615 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE---------------------------- 32
           M  N N  +A+ LS +++  WQ F   P++E+                            
Sbjct: 1   MSDNRNTILAVVLSGLVLLGWQYFINIPQMEKQRAAQQAQQAQQQPQTTSPGTAPSGTPS 60

Query: 33  MNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92
                        P+  +   AA     R  AL+ +PR++++   L GSI LKGA+ DDL
Sbjct: 61  ATPAPGTPSAPGAPSPANPQAAATPTVSREAALAATPRIKVETTQLSGSIALKGARIDDL 120

Query: 93  NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILT 151
            L  Y   V   SP + L SPS +   Y+AE  +V  A  N++LP+ NTVW       LT
Sbjct: 121 ALTQYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGANVKLPDHNTVWTQEGSGALT 180

Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
           P  P+ L + N   + F R I++D+ YLF + D VTN     +   P   I RH      
Sbjct: 181 PANPVTLKWDNGEGLTFRRQIAVDDRYLFTVKDDVTNTGAAPVTLYPFALISRHGTPHVE 240

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
             + + EG I  LG+  L E  YS I+++    F  +N WLGI+DKYWAS  +P      
Sbjct: 241 GYYILHEGLIGYLGEHGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDNTAQL 300

Query: 272 HSQFKYLSDGH-ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHY 321
            ++F     G+   YQ  +  +  T+  G +++    LFAGAKE            +  Y
Sbjct: 301 QARFSANKAGNVTTYQTDYLEDARTVPIGGTVSANARLFAGAKEARVVGINFPFAGLGGY 360

Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381
           ++ L +  F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV +KL+F PLA K
Sbjct: 361 DRQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLIKLIFLPLANK 420

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
            Y S A MK IQP++  L+E+      +  Q+ M+++Y+   INP+AGC PILLQIPVFF
Sbjct: 421 SYASMAKMKAIQPQLLALKERHPDDKVK-QQQEMMEIYRKEKINPVAGCLPILLQIPVFF 479

Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPI 495
           ++YKV+ +++EMRHAPF+GWI DL+AADPTN+F LFG++P+          ++ +G WP+
Sbjct: 480 SLYKVLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLIPYDPTAIPVLGHYLVLGAWPL 539

Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           +M  +M+ QMK++P P D  Q MI  WMPV+F F L+ FPAGL+IYW+W+N++S++QQA 
Sbjct: 540 VMGFTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNLLSVIQQAY 599

Query: 556 IMKMHGAEIGLIDRL 570
           IM+ +G ++ L D L
Sbjct: 600 IMRRNGVKVELFDNL 614


>gi|254561547|ref|YP_003068642.1| transmembrane protein, OxaA-like, preprotein translocase component
           [Methylobacterium extorquens DM4]
 gi|254268825|emb|CAX24786.1| transmembrane protein, OxaA-like, preprotein translocase component
           [Methylobacterium extorquens DM4]
          Length = 637

 Score =  471 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 247/612 (40%), Positives = 363/612 (59%), Gaps = 36/612 (5%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD----------- 50
               N FVAIALS++++  W  F   P  E      ++        Q             
Sbjct: 24  NDKTNMFVAIALSLVVLLGWHYFVTGPASERQRQAAQSQTAQTGAPQTADGIPSPSPREG 83

Query: 51  ----------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
                        AA     R  AL+ S RV +  P+L GSI LKGA+ DD++L+ YH  
Sbjct: 84  SPNAPAPGTLPGAAAQGPVSREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHET 143

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
           VS  SP + LLSP+ + N Y+AE  +V       LPN++T+W    G +L P  P+ L +
Sbjct: 144 VSDESPRIVLLSPTGSANPYYAEFGWVGANAGP-LPNADTLWK-ADGDLLAPGRPLTLTW 201

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
            N   ++F+R +++D+ ++F + D V N S + +   P   + R         + + EG 
Sbjct: 202 DNGQGLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQTQGYYVLHEGL 261

Query: 221 IAVLGDKSLVEQKYSDIEKSS---------ISNFHESNSWLGISDKYWASVFIPSKETSF 271
           I VLG   L E  Y  + K            +  + +  W+GI+DKYWA+  IP ++  F
Sbjct: 262 IGVLGGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKPF 321

Query: 272 HSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
              F   +DG  + YQ     + +T+ P  S  TT  LFAGAKE   I+ YE++  I +F
Sbjct: 322 TGAFTERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNQINAYEREFGIKQF 381

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           +++IDWGWF+F+ KPMF  + +F++L+GNFG++I+L T+ +KL F P+A + YVS A MK
Sbjct: 382 DLMIDWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKMK 441

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            +QP++  +RE++K    +  Q+AM++LYK   INP+AGCWP+L+QIPVFFA+YKV+ I+
Sbjct: 442 AVQPEMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFIT 500

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV--GIWPIIMSLSMFIQMKMS 508
           +EMRHAPF+GWI+DLAA DPT+I  LFG+LPF  P ++ +  G+WPIIM ++MFIQMKM+
Sbjct: 501 IEMRHAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKMN 560

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
           P P D  QA +  +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D
Sbjct: 561 PAPPDPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWD 620

Query: 569 RLRSTFSKNYNS 580
            LR  F +   S
Sbjct: 621 NLRGMFKRGNKS 632


>gi|13474029|ref|NP_105597.1| putative inner membrane protein translocase component YidC
           [Mesorhizobium loti MAFF303099]
 gi|38503148|sp|Q98D88|OXAA_RHILO RecName: Full=Inner membrane protein oxaA
 gi|14024781|dbj|BAB51383.1| mlr4812 [Mesorhizobium loti MAFF303099]
          Length = 603

 Score =  471 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 273/600 (45%), Positives = 375/600 (62%), Gaps = 23/600 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----------ERKNIQTVKQPNQVD 50
           ME N N+F+ IALSV+I+  WQ FYV PR E              E+K       P    
Sbjct: 1   MENNRNFFITIALSVLILAVWQYFYVLPRSEAQREAARVEQQRVEEQKKAAEAANPGAGT 60

Query: 51  NSYAAVLIDD-----------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99
            + A   I +           R QAL+ S RV++  PSL GSINL GA+ DDL L+ Y  
Sbjct: 61  PAPAPGTIPNAPGGDTVTVAGRDQALAASKRVKIDTPSLEGSINLTGARLDDLKLKHYTE 120

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159
            V  NSP + LL+P      YFAE+ +V       +P + TVWN+     L+P+TP+ L 
Sbjct: 121 TVDKNSPEIELLNPQALPTGYFAEIGFVGNDKTGAVPGAETVWNVDGNPTLSPSTPVTLT 180

Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
           + N   + F+RT S+D +Y+F + DTV N+    +     GR+ R+      +T+ + EG
Sbjct: 181 YTNDKGLTFKRTFSVDANYMFTVSDTVQNSGSSAVSLFNYGRVTRYDKPAVASTYVLHEG 240

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
            I   G + L E KY+ IEK         ++ WLGI+DKYWA   +P+++  F  ++ + 
Sbjct: 241 LIGFTGTEGLQEHKYASIEKDKQYQPGKATDGWLGITDKYWAVTLVPTEKQPFQPRYAFF 300

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
            DG  RYQ+ F  + I +  G+S T    +FAGAKE   I+ Y +D  I RF++LIDWGW
Sbjct: 301 EDGRHRYQSDFLTDAINVEAGQSATVETEVFAGAKEVAKINAYAEDRHIKRFDLLIDWGW 360

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           F+FI KPMF L+   Y  +GNFG+AI+ TTV VK LFFPLA K Y S ANMK +QPK+ E
Sbjct: 361 FHFITKPMFWLIDTLYKFLGNFGLAILATTVIVKALFFPLANKSYASMANMKKVQPKMLE 420

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +REK+     +  Q+AM++LYKT  INPLAGCWP+ LQIPVFF++YKV+ I++EMRHAPF
Sbjct: 421 IREKYADDKMK-QQQAMMELYKTEKINPLAGCWPVALQIPVFFSLYKVLYITIEMRHAPF 479

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           +GWI+DLAA DPT++F LFG++P  LP  + +G+WP+IM ++MF+QM+M+P P D  QA 
Sbjct: 480 FGWIQDLAAPDPTSLFNLFGLIPVTLPHMLMIGVWPLIMGVTMFLQMRMNPTPPDPTQAA 539

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           I  WMPV+F F ++ FPAGL+IYW+W+N++SI+QQ VIMK  GA+I L D L + F K  
Sbjct: 540 IFTWMPVIFTFMMAGFPAGLVIYWAWNNMLSILQQGVIMKRQGAKIELWDNLMALFKKKP 599


>gi|154250755|ref|YP_001411579.1| 60 kDa inner membrane insertion protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154154705|gb|ABS61922.1| 60 kDa inner membrane insertion protein [Parvibaculum
           lavamentivorans DS-1]
          Length = 609

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 247/595 (41%), Positives = 356/595 (59%), Gaps = 27/595 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI-------------------- 40
           M  N N+ +AI LSV++   WQ F++ P++E     ++ +                    
Sbjct: 1   MGDNRNFIIAIFLSVLVFIGWQYFFIEPQMEAERARQEQLAADNGTAEPAPGAAPSAPGD 60

Query: 41  ---QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97
               +V  P       AA     R +AL+ S RV + +  L GS++L+GA+FDDL L  Y
Sbjct: 61  ARLPSVDAPATRAPGVAASGAVARDEALAQSARVPILSEELQGSVSLRGARFDDLKLLKY 120

Query: 98  HLDVSSNSPIVTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPI 156
           ++ V   SP V L SP  T+  YF+E  +++    NI LP S T W L +G  LTP TP+
Sbjct: 121 NVTVDPESPEVELFSPVRTERPYFSEFGFIAAPGANINLPTSATEWELEAGDRLTPQTPV 180

Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216
            L + N   ++F R I+LDEH+LF + D + N S +++   P G I R      ++ F +
Sbjct: 181 TLRWDNGQGLVFHREIALDEHFLFTVTDRIENLSANEVTLYPYGLISRTGRPAGSSFFIL 240

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
            EGFI            Y D E+       ++  WLGI+DKYWA+  +P    +F + F 
Sbjct: 241 HEGFIGEFPSVGEKAITYDDAEEDDPVQVTDTEGWLGITDKYWAAALVPQSGLNFVANFS 300

Query: 277 -YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
            +       YQA F     T+  G SIT  N LFAGAK    I  Y  D  I +F +LID
Sbjct: 301 EHPDPAIVNYQADFRYGAQTVPAGGSITLNNRLFAGAKVSTVIDSYR-DAGIYKFSLLID 359

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           WGWF+F+ +PMF  + +    VGNFGIAI++ TV +KL+F+PLA K YV+ + MK +QP+
Sbjct: 360 WGWFWFLTQPMFDALHFIALHVGNFGIAILVITVLIKLVFYPLANKSYVAMSKMKKLQPE 419

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           +++LRE++K    +  Q+ +++LYK   +NPLAGC P+L+QIPVFFA+YKV+ +++EMRH
Sbjct: 420 MEKLRERYKDDKLK-QQQEIMELYKKEKVNPLAGCLPVLIQIPVFFALYKVLFVTIEMRH 478

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           APF+GWI DL+A DPT+IF LFG++P+  P  + +GIWP+IM  +MF+Q +M+P PAD  
Sbjct: 479 APFFGWINDLSAPDPTSIFNLFGLIPWDPPSMLMIGIWPLIMGFTMFVQQRMNPLPADPI 538

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
           QA I  WMPV+F F L+SFPAGL+IYW+W+N +S++QQ VIMK  G +I +   L
Sbjct: 539 QAQIFTWMPVIFTFMLASFPAGLVIYWAWNNTLSVIQQGVIMKRQGVKIEIFSNL 593


>gi|260577136|ref|ZP_05845113.1| 60 kDa inner membrane insertion protein [Rhodobacter sp. SW2]
 gi|259020610|gb|EEW23929.1| 60 kDa inner membrane insertion protein [Rhodobacter sp. SW2]
          Length = 646

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 216/598 (36%), Positives = 333/598 (55%), Gaps = 21/598 (3%)

Query: 1   ME-RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           M+ +N N  +A ALS +++  W   +  P      N    I   +               
Sbjct: 1   MDGQNKNLILATALSFLVILVWFVLFPPPEPVVDPNAPA-ISATEALTPPVADQTTAATT 59

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
           + A A+  +PR+ +  P L GSI++ G + DDL+L+GY   +   S IV LLSP    +A
Sbjct: 60  EPAAAVPETPRLTIDTPLLQGSISMLGGRIDDLSLKGYKESLDPASDIVRLLSPVGKDSA 119

Query: 120 YFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
           Y+A   +    +  N ++P +NT W L +G  L P  P+ L + N   + F RTI++D+H
Sbjct: 120 YYALYGWAPGGDLANEDVPGANTEWKLAAGTSLAPGQPVTLAWDNGKGLNFTRTIAIDDH 179

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y+F +   V N +  ++R +P G + RH        F V    +    D  L E KY D+
Sbjct: 180 YMFTVTQGVENTTGAEVRLAPYGIVARHGKPAGLQNFYVLHEGVVGRTDGKLEEVKYKDL 239

Query: 238 EKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
               +              ++ W+G +DKYW +  IP++   F S  KY+      YQ +
Sbjct: 240 VDLPVVEREGAQAEVVEATTDGWIGFTDKYWMTTLIPAQGKPFTSVTKYV-ASADIYQVE 298

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                + + PG    TT+ LFAGAKE+ TI  Y+ D  +P F   IDWGWF+F+ KPMF 
Sbjct: 299 TREPVLVVAPGAKAETTSRLFAGAKEWATIRGYQNDAGVPGFIDSIDWGWFFFLTKPMFW 358

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           ++     L+GN G+AI+  T+ +K++ FPLA K YVS A MK +QP+I+ ++E+      
Sbjct: 359 VLHNLNALIGNMGLAIIGLTLVLKVIVFPLAYKSYVSMARMKELQPEIEAMKERVGDDK- 417

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q +Q  M++LYK   +NP AGC P+L+QIP+FF++YKVI ++LE+RHAPF+GW+ DL+A 
Sbjct: 418 QKVQVEMMKLYKEKKVNPAAGCLPVLIQIPIFFSLYKVIFVTLELRHAPFFGWLTDLSAR 477

Query: 469 DPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
           D +++F  FG+ P+  P        + +G+ PI++ +SM++Q K++P PAD  Q MI  W
Sbjct: 478 DSSSLFNFFGLAPWAAPEHGTLLATIFIGLLPILLGISMWLQQKLNPAPADPTQQMIFAW 537

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           MP VF+F L SF +GL++YW  +NVI+  QQ +IM+ HG    +   ++S F K   +
Sbjct: 538 MPWVFMFMLGSFASGLVLYWITNNVITFTQQYIIMRSHGHHPDIFGNIKSGFKKKPAA 595


>gi|163795447|ref|ZP_02189414.1| 60 kDa inner membrane insertion protein [alpha proteobacterium
           BAL199]
 gi|159179433|gb|EDP63964.1| 60 kDa inner membrane insertion protein [alpha proteobacterium
           BAL199]
          Length = 584

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 220/582 (37%), Positives = 330/582 (56%), Gaps = 21/582 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE------------------EMNNERKNIQT 42
           M    N  +AI LSV+I+  +Q     P+I+                             
Sbjct: 1   MTDQKNMILAIVLSVLILLGFQFLVERPKIDQQRQQQAQQQGQTSQADGSSVPVPGQSTA 60

Query: 43  VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
              P    +S      + R  AL++SPR+ +  P + GSI LKGA+ DD+ L  Y + + 
Sbjct: 61  PSAPGAARDSAGQTAGESREAALALSPRITISTPRVQGSIALKGARIDDVVLTDYRVTID 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
             SP + LL P+  K+ Y+AE  +V+ + +     +           LTP  P+ L + N
Sbjct: 121 PKSPPIHLLDPTGLKHPYYAEFGWVAASGSSVAVPTPETIWTTDSTTLTPERPVTLSWSN 180

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
                FERTI++D+ Y+F +   V N S D I   P G I R       + + + EG + 
Sbjct: 181 GQGQTFERTIAIDKDYMFTVSQRVVNKSTDAITLYPYGLISRGGTPETLDFYILHEGPLG 240

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDG 281
           V  D +L E  YSD+ +        +  W+GI+DKYW +  +P +  +++  F++   + 
Sbjct: 241 VFND-TLTEINYSDLREDGDVQRAATGGWIGITDKYWLAALVPGQGQTWNYNFRHSVRNQ 299

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
             RYQ  F     +I  G++ +T N LFAGAK    +  YE+   +  F++ ID+GWFYF
Sbjct: 300 SDRYQVDFLGEATSIAAGETASTENRLFAGAKLVKVLDRYEEQYGVANFDLAIDFGWFYF 359

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           + KP F ++++ + L+GNFG+AI+  T+ VKLLFFPLA K Y S A MK + PK+ E+RE
Sbjct: 360 LTKPFFYVLTWLHALLGNFGLAILGLTICVKLLFFPLANKSYASMAKMKALTPKLQEMRE 419

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           K      Q L   M+ LYK   +NP AGC PI++QIPVFFA+YK + +++EMRHAPF+GW
Sbjct: 420 KHGD-DRQRLNDEMMALYKREKVNPAAGCLPIVIQIPVFFALYKTLFVNIEMRHAPFYGW 478

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
           IKDL+A DPT IF L G++P+  P F+ +GIWP++M ++MF+Q K++P PAD  QA I  
Sbjct: 479 IKDLSAPDPTTIFNLLGVIPWDPPQFLMIGIWPVLMGITMFLQQKLNPAPADPVQAKIFM 538

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           ++P++F F L  F AGL+IYW+W+N++SI QQ +IM+  G +
Sbjct: 539 FLPLMFTFLLGHFAAGLVIYWTWNNLLSITQQWIIMRRMGIK 580


>gi|182680230|ref|YP_001834376.1| 60 kDa inner membrane insertion protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|254772748|sp|B2IDV5|OXAA_BEII9 RecName: Full=Inner membrane protein oxaA
 gi|182636113|gb|ACB96887.1| 60 kDa inner membrane insertion protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 604

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 242/600 (40%), Positives = 357/600 (59%), Gaps = 25/600 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA------- 54
           + + N ++AI LS++++  W  F+  P++E+    +   +   Q     ++ A       
Sbjct: 3   QDSRNLYLAIGLSLLVLIGWNYFFAGPQVEKARQAQIVREQQAQTQTTSDTTARSDLNVP 62

Query: 55  ---------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
                          R +AL+ SPRV+L  P+L GSINL+GA+ DD++L+ Y   V+ +S
Sbjct: 63  GQRSLPGESPQTQLSRPEALAASPRVKLDTPNLFGSINLRGARIDDVSLKAYRETVAKDS 122

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
           P + LLSPS T   Y+A+  +V+ A    L   +        ++LTP  P+ L + N   
Sbjct: 123 PNIVLLSPSGTPAPYYADAGFVAPAEAGLLLPKSDTLWSADREVLTPEAPVTLTYDNGQG 182

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           ++F RTIS+D+ ++F + D V N +   +   P   + RH          + EG + V+G
Sbjct: 183 LIFHRTISVDDRFMFTLTDKVENKTDKPVTLYPYSLVSRHGRPVTAGYAVLHEGMVGVIG 242

Query: 226 DKSLVEQKYSDIEKSSI--SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
           D  L E  Y  I K      +F  +  WLG +DKYWA+V  P + T F  +F        
Sbjct: 243 DNGLQEITYDKIHKEENATKSFKGTGGWLGFTDKYWAAVIAPDQATPFEGRFSERGTTTP 302

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            YQ       +TI PG +    + LFAGAKE  T+  Y  +L I +F++LIDWG+FYFI 
Sbjct: 303 LYQTDALGPALTIAPGGTGGDMSRLFAGAKETQTLDDYRNELGIKKFDLLIDWGYFYFIT 362

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           +PMF ++   Y +VGNFG+AI+  TV VK +FFPLA + Y+S A MK IQP++  LRE++
Sbjct: 363 RPMFWILHTIYQVVGNFGVAILCITVLVKAVFFPLANRSYLSMAKMKAIQPQMLALRERY 422

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                +  Q+ +++LYK   INP+AGC P+L+QIPVFFA+YKV+ +++EMR APF+GWI+
Sbjct: 423 ADDKVK-QQQELMELYKREKINPVAGCLPMLIQIPVFFALYKVLFVTIEMRQAPFFGWIR 481

Query: 464 DLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           DL+A DPTNIF LFG+LPF          F+ +GIWP+IM +SMF QMKM+P PAD  Q 
Sbjct: 482 DLSAPDPTNIFNLFGLLPFDPTHLPMIGHFLAIGIWPLIMGVSMFFQMKMNPEPADPVQK 541

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
            + +WMPV+F F L +FP+GL+IYW+W+N +S++QQ++IMK  G ++ L D L STF K 
Sbjct: 542 QMFSWMPVIFTFMLGTFPSGLVIYWTWNNTLSVLQQSLIMKRAGVKVELWDNLMSTFRKK 601


>gi|227820669|ref|YP_002824639.1| putative inner membrane protein translocase component YidC
           [Sinorhizobium fredii NGR234]
 gi|254773017|sp|C3MF49|OXAA_RHISN RecName: Full=Inner membrane protein oxaA
 gi|227339668|gb|ACP23886.1| putative inner membrane protein translocase component YidC
           [Sinorhizobium fredii NGR234]
          Length = 592

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 286/589 (48%), Positives = 387/589 (65%), Gaps = 11/589 (1%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51
           ME N NYFVAIALSV+I+ AWQ FYV PR+++     +  Q  +Q               
Sbjct: 2   MENNRNYFVAIALSVLILVAWQYFYVNPRMDKDRIAAEKAQQTQQVQPQQGGQQPAPGQA 61

Query: 52  -SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
               AV  + R QA++ S RV +  P+L GSINL GA+FDDL L+GYH  V   SP++TL
Sbjct: 62  LPGGAVPGESRDQAVAKSARVAIDTPALSGSINLTGARFDDLKLKGYHETVDPKSPVITL 121

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170
            SP+ T + YF E+ Y+    +  +P   TVW L  G+ LTP TP+ L + N   I F R
Sbjct: 122 FSPAETADGYFTEIGYIGNDASGSVPGPQTVWTLSGGEKLTPATPVTLTYTNDKGITFAR 181

Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230
           TIS+DE+Y+F++VD++ N+    +  S  GR+ R    T  + + + EGFI V G     
Sbjct: 182 TISIDENYMFQVVDSIKNDGSAPVSLSSYGRVTRFNKPTTPSIYVLHEGFIGVAGGSLQE 241

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
                  E   +     +  W GI+DKYWA+  +P +ET F  +F + +DG  R+Q+ + 
Sbjct: 242 VGYSKIEENLPVEPGKTTGGWHGITDKYWAAAIVPPQETPFDIRFSHFTDGRPRFQSDYK 301

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
            + +T+ PG+S    N +FAGAKE   +  Y    AIP+FE LIDWGWF+FI +PMF +M
Sbjct: 302 GDAVTVAPGQSAEVKNLVFAGAKEVQVVDTYTTAYAIPKFEKLIDWGWFWFITQPMFKMM 361

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
            +F+ L GNFG+AI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF       
Sbjct: 362 DFFFRLFGNFGVAILVTTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGD-DRMG 420

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           LQ+AM+QLYK   INPLAGCWPIL+QIPVFFA+YKVI I++EMRHAPF+GWI+DL+A DP
Sbjct: 421 LQQAMMQLYKDEKINPLAGCWPILIQIPVFFALYKVIYITIEMRHAPFFGWIRDLSAPDP 480

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
           T I  LFG+LPF  P F+H+GIWPIIM ++MF+QM+M+P P D  QAM+  WMP+VF F 
Sbjct: 481 TTIVNLFGLLPFDGPAFLHLGIWPIIMGVTMFLQMRMNPTPPDPTQAMLFTWMPLVFTFM 540

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           L+SFPAGL+IYW+W+N +SI QQ++IMK  G +I L D L+  F+K   
Sbjct: 541 LASFPAGLVIYWAWNNTLSITQQSIIMKRQGVKIELFDNLKGLFTKRPK 589


>gi|163851774|ref|YP_001639817.1| 60 kDa inner membrane insertion protein [Methylobacterium
           extorquens PA1]
 gi|254773001|sp|A9W590|OXAA_METEP RecName: Full=Inner membrane protein oxaA
 gi|163663379|gb|ABY30746.1| 60 kDa inner membrane insertion protein [Methylobacterium
           extorquens PA1]
          Length = 616

 Score =  468 bits (1204), Expect = e-129,   Method: Composition-based stats.
 Identities = 248/612 (40%), Positives = 363/612 (59%), Gaps = 36/612 (5%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD----------- 50
               N FVAIALS++++  W  F   P  E      ++        Q             
Sbjct: 3   NDKTNMFVAIALSLVVLLGWHYFVTGPASERQRQAAQSQTAQTGAPQTADGIPSPSPREG 62

Query: 51  ----------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
                        AA     R  AL+ S RV +  P+L GSI LKGA+ DD++L+ YH  
Sbjct: 63  GPNAPAPGTLPGAAAQGPVSREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHET 122

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
           VS  SP + LLSP+ T N Y+AE  +V       LPN++T+W    G +L P  P+ L +
Sbjct: 123 VSDESPRIVLLSPTGTANPYYAEFGWVGANAGP-LPNADTLWK-ADGDLLAPGRPLTLTW 180

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
            N   ++F+R +++D+ ++F + D V N S + +   P   + R         + + EG 
Sbjct: 181 DNGQGLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQTQGYYVLHEGL 240

Query: 221 IAVLGDKSLVEQKYSDIEKSS---------ISNFHESNSWLGISDKYWASVFIPSKETSF 271
           I VLG   L E  Y  + K            +  + +  W+GI+DKYWA+  IP ++  F
Sbjct: 241 IGVLGGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKPF 300

Query: 272 HSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
              F   +DG  + YQ     + +T+ P  S  TT  LFAGAKE   I+ YE++  I +F
Sbjct: 301 TGAFTERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNQINAYEREFGIKQF 360

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           +++IDWGWF+F+ KPMF  + +F++L+GNFG++I+L T+ +KL F P+A + YVS A MK
Sbjct: 361 DLMIDWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKMK 420

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            +QP++  +RE++K    +  Q+AM++LYK   INP+AGCWP+L+QIPVFFA+YKV+ I+
Sbjct: 421 AVQPEMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFIT 479

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV--GIWPIIMSLSMFIQMKMS 508
           +EMRHAPF+GWI+DLAA DPT+I  LFG+LPF  P ++ +  G+WPIIM ++MFIQMKM+
Sbjct: 480 IEMRHAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKMN 539

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
           P P D  QA +  +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D
Sbjct: 540 PAPPDPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWD 599

Query: 569 RLRSTFSKNYNS 580
            LR  F +   S
Sbjct: 600 NLRGMFKRGNKS 611


>gi|84685375|ref|ZP_01013273.1| putative inner membrane protein translocase component YidC
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84666532|gb|EAQ13004.1| putative inner membrane protein translocase component YidC
           [Rhodobacterales bacterium HTCC2654]
          Length = 613

 Score =  468 bits (1204), Expect = e-129,   Method: Composition-based stats.
 Identities = 217/613 (35%), Positives = 333/613 (54%), Gaps = 34/613 (5%)

Query: 1   ME-RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           ME +N N  +A  LS +++ AW   +     E +  E               +       
Sbjct: 1   MENQNRNLLIATVLSFVVITAWMLLFPPAEPEAVQPEEVAETLAPGATDGAATPPNAAEQ 60

Query: 60  DRAQA--------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
               A              L  SPR+ ++ P L GSI+L G + DDL+L  Y + +   S
Sbjct: 61  TGTDAAPEATPDTTTTAQTLENSPRIPVETPKLSGSISLIGGRIDDLHLSDYRVSLDKGS 120

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
             VTLL PS +  AY+    +    N  N ++P + T W L  G  LTP TPI L + N 
Sbjct: 121 DTVTLLRPSGSDEAYYTLYGWAPGGNLGNADVPGAMTQWELEEGDTLTPETPITLAWTND 180

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
             ++F RTIS+DE YLF +  +V N S    R +P G I RH   +    F +    +  
Sbjct: 181 AGMIFRRTISVDEDYLFTVRQSVENGSDIAQRLAPYGLIARHGEPSNLKGFFILHEGVIR 240

Query: 224 LGDKSLVEQKYSDIEKSSISNF---------HESNSWLGISDKYWASVFIPSKETSFHSQ 274
             D  L E  Y D  +                  N W+G +D YW ++ +P     + + 
Sbjct: 241 QDDTELSEIDYKDARELDRDPREGAPAEATAITENGWVGFTDHYWETILVPESGQPYTAV 300

Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
            KY+ +G   YQ +     I + PG +   +  LFAGAKE+ TI  Y+ D  I RF   I
Sbjct: 301 VKYV-EGADIYQTEVRLPTIEVAPGATAEVSTRLFAGAKEWDTIRDYQNDEGIYRFLDSI 359

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           DWG F+F+ KP+F ++ + ++ +GN G +I+  T  +K++ FPLA + YVS A MK +QP
Sbjct: 360 DWGMFFFLTKPIFAVLHWLHSFIGNMGWSIIALTFVIKMVLFPLAYRSYVSMAKMKELQP 419

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           ++++LRE+      ++ Q+ M++LYK + +NP +GC PILLQIP++F++YKVI ++LE+R
Sbjct: 420 EMEKLREQAGDDRMKM-QQGMMELYKKNKVNPASGCLPILLQIPIWFSLYKVIFVTLELR 478

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMS 508
           H P++GWI+DL+A DP++I  LFG+LP   P       F  +G+ PI++ +SM++Q K++
Sbjct: 479 HEPWFGWIRDLSAPDPSSILNLFGLLPNAAPDPTSWFYFFSLGVLPILLGISMWLQQKLN 538

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
           P PAD  QA I+NWMP VF+F L  F +GL+IYW  +N ++ +QQ  IM+ HGA+  +  
Sbjct: 539 PAPADATQATIMNWMPWVFMFMLGRFASGLVIYWIANNTLTFIQQYTIMRSHGAKPDIFG 598

Query: 569 RLRSTFSKNYNSQ 581
            ++S+F K   ++
Sbjct: 599 NIKSSFKKKPATE 611


>gi|225686778|ref|YP_002734750.1| putative inner membrane protein translocase component YidC
           [Brucella melitensis ATCC 23457]
 gi|256262088|ref|ZP_05464620.1| inner membrane protein [Brucella melitensis bv. 2 str. 63/9]
 gi|225642883|gb|ACO02796.1| Inner membrane protein oxaA [Brucella melitensis ATCC 23457]
 gi|263091777|gb|EEZ16108.1| inner membrane protein [Brucella melitensis bv. 2 str. 63/9]
 gi|326411186|gb|ADZ68250.1| putative inner membrane protein translocase component YidC
           [Brucella melitensis M28]
 gi|326554477|gb|ADZ89116.1| putative inner membrane protein translocase component YidC
           [Brucella melitensis M5-90]
          Length = 610

 Score =  468 bits (1204), Expect = e-129,   Method: Composition-based stats.
 Identities = 267/607 (43%), Positives = 379/607 (62%), Gaps = 29/607 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41
           ME   N+F+ IALS++I+  WQ FY+ P+ E    + +  +                   
Sbjct: 1   MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60

Query: 42  -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94
                           ++ AA     R  A++ SPR+E+  PSL GSINL GA+ DDL L
Sbjct: 61  DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120

Query: 95  RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154
           + YH  VS  SP + LL+PS+ K  YF EL +        +P  NTVW +     LTP+T
Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180

Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213
           P+ L + N  N+ F+R IS+D+ Y+F + DT+ NN    +  +  GR+   ++P+ A+ T
Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240

Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
           + + EG I V+G   L E KY+   +   IS       W+GI+DKYWA+  IP ++  F 
Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
            +F + ++   RYQ+   +  +T+ PG+S    N +FAGAK   TI +YE    I +F++
Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           LIDWGWFYFI KPMF L+ + Y   GNFG+AI++ TV +K LFFPLA K Y S A MK +
Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QPK+ E+REK+     +  Q+AM++LYK   INPLAGCWP+L+QIPVFFA+YKV+ +++E
Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKRERINPLAGCWPVLVQIPVFFALYKVLYVTIE 479

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P 
Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  QA I  WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK  G +I L D L+ 
Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599

Query: 573 TFSKNYN 579
            F +   
Sbjct: 600 LFRRKPK 606


>gi|254473802|ref|ZP_05087197.1| 60 kDa inner membrane insertion protein [Pseudovibrio sp. JE062]
 gi|211957188|gb|EEA92393.1| 60 kDa inner membrane insertion protein [Pseudovibrio sp. JE062]
          Length = 603

 Score =  468 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 258/603 (42%), Positives = 371/603 (61%), Gaps = 24/603 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRI--------------------EEMNNERKNI 40
           M  N N  VAI LS++++  WQ F   P++                           +  
Sbjct: 1   MNDNRNMIVAIVLSLVVLLGWQYFIAGPQLEAQQEAQQAQLANDAQQAGSSSPVALPEGA 60

Query: 41  QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
                    ++  AA     R QAL+ SPR+ +  PSL GS+NLKGA+ DDL L+GY   
Sbjct: 61  SGQVTAPGTESGTAAQSFVSREQALAASPRLTIDTPSLSGSVNLKGAKLDDLRLKGYRQT 120

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLV 159
           ++ +S  V L SP  +   Y+AE  +V+     I+LPN+ TVW   +   LTP++PI L 
Sbjct: 121 IAKDSETVVLFSPKGSPAPYYAEHGWVADPGVQIKLPNAETVWTAETSGNLTPSSPIVLN 180

Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
           + N   ++F+RT S+DE+Y+F +   V NNS   ++  P G I R+        F + EG
Sbjct: 181 WDNGEGLVFKRTFSVDENYMFTVDQEVQNNSGQNVQLYPYGLIARNGEPETAGFFVLHEG 240

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
            I V+GD+ L E  YSD+           +  WLG +DKYWA+  IP+  T F   F Y 
Sbjct: 241 LIGVIGDEGLQEINYSDLIDDGSIRPGRANMGWLGFTDKYWAATLIPTPGTEFQPNFSY- 299

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
           +     +Q+ +  +   ++ G  IT ++ L+AGAK    I  Y+    I  F+++IDWGW
Sbjct: 300 NARTQNFQSDYLGSATQVVDGAKITNSSLLYAGAKITSLIDGYQNSYDILNFDLMIDWGW 359

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           FYF+ KPMF  + + Y+LVGNFGIAI+L TV VK +FFPLA K YVS + MK +QPK+ E
Sbjct: 360 FYFLTKPMFWTIDWLYSLVGNFGIAILLVTVIVKAIFFPLANKSYVSMSRMKLVQPKMTE 419

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +REK+K    Q  Q+AM++LYKT  INPLAGC P+L+QIPVFF++YKV+ +++EMRHAPF
Sbjct: 420 IREKYKDDK-QKQQQAMMELYKTEKINPLAGCLPMLIQIPVFFSLYKVLFVTIEMRHAPF 478

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           +GWI+DL+A DPT IF LFG++P+  P F+ +G+WP+IM ++MF+QMKM+P PA+  Q M
Sbjct: 479 FGWIQDLSAPDPTTIFNLFGLIPWDPPTFLMIGVWPLIMGITMFLQMKMNPAPAEPAQQM 538

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           I NWMPV+F F L++FPAGL+IYW+W+N +S++QQ VIM+  G ++ L D L++TF +  
Sbjct: 539 IFNWMPVIFTFMLATFPAGLVIYWAWNNTLSVLQQGVIMRRQGVKLELFDNLKATFKRKP 598

Query: 579 NSQ 581
             +
Sbjct: 599 KEE 601


>gi|146337896|ref|YP_001202944.1| putative inner membrane protein translocase component YidC
           [Bradyrhizobium sp. ORS278]
 gi|146190702|emb|CAL74706.1| Inner membrane protein oxaA [Bradyrhizobium sp. ORS278]
          Length = 622

 Score =  468 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 254/623 (40%), Positives = 365/623 (58%), Gaps = 45/623 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK------------NIQTVKQPNQ 48
           M  N N  +A+ LS +++  WQ FY  P++E+   + +                   P+ 
Sbjct: 1   MTDNRNTILAVILSGLVLILWQVFYNGPQMEKQRAQAQLQSELAKKQGPATQPDGTAPSA 60

Query: 49  VDNSYAAVL---------------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93
                AA                 +  R  A++ +PRV++  P L GSI+LKGA+ DDL 
Sbjct: 61  TPQPNAAASGSPSAPGGAATTATGVVPRETAIAANPRVKIDTPRLSGSISLKGARIDDLA 120

Query: 94  LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTP 152
              Y   V  NSP + L SPSNT   Y+AE  +V+ A   +++P+ NTVW       LTP
Sbjct: 121 FVQYRETVDPNSPAIVLFSPSNTAEPYYAEFGWVNAAGAKVQVPDQNTVWQQDGANALTP 180

Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212
            TP+KL + N + + F+RTIS+D+HYLF I D VTN     +   P G I RH     + 
Sbjct: 181 ATPVKLTYTNGDGLTFQRTISVDDHYLFTIKDDVTNAGSAPVTLYPYGLISRHGTPHVSG 240

Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
            + + EG I  LG+K L E  Y  ++    + F  +N WLGI+DKYWA+  +P  +    
Sbjct: 241 YYILHEGLIGYLGEKGLQEFTYKKMDDEKAAKFDITNGWLGITDKYWAAALLPMTDARLQ 300

Query: 273 SQFKYL-SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYE 322
           + +     D   RYQ  +  N  T+  G S T +  LFAGAKE            +  Y 
Sbjct: 301 ANYSSKLVDNQHRYQTDYVENPQTVPAGGSATVSTRLFAGAKEAGVVGINFPLGGLGGYN 360

Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382
           + L +  F++LIDWGWFYF+ KPMF+ + +F+   GNFG++I+L TV VKL F PLA K 
Sbjct: 361 QQLGLNHFDLLIDWGWFYFLTKPMFLALDFFFRFFGNFGVSILLVTVLVKLAFLPLANKS 420

Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
           Y S A MK IQP++  L+E++     +  Q+ M+++YK   INP+AGC P++LQIPVFF+
Sbjct: 421 YASMAKMKAIQPQLQALKERYPDDRMK-QQQEMMEIYKKEKINPVAGCLPVVLQIPVFFS 479

Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPII 496
           +YKV+ +++EMRHAPF GWIKDL+A DPTN+FTLFG++PF          ++ +GIWPII
Sbjct: 480 LYKVLFVTIEMRHAPFIGWIKDLSAPDPTNLFTLFGLIPFDPTQLPLFGHYLALGIWPII 539

Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           M ++M+ QMK++P P D  QAMI NWMP++F F L+ FPAGL+IYW+W+N +S++QQ+ I
Sbjct: 540 MGITMWFQMKLNPAPPDPTQAMIFNWMPLIFTFMLAGFPAGLVIYWAWNNTLSVLQQSFI 599

Query: 557 MKMHGAEIGLIDRLRSTFSKNYN 579
           M+ +G ++ L D +R TF K   
Sbjct: 600 MRRNGVKVELFDNIRGTFRKKPA 622


>gi|190890108|ref|YP_001976650.1| inner membrane transmembrane protein [Rhizobium etli CIAT 652]
 gi|254773016|sp|B3Q040|OXAA_RHIE6 RecName: Full=Inner membrane protein oxaA
 gi|190695387|gb|ACE89472.1| inner membrane transmembrane protein [Rhizobium etli CIAT 652]
          Length = 598

 Score =  468 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 290/593 (48%), Positives = 394/593 (66%), Gaps = 17/593 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP-------------- 46
           ME N NYF+AIALSV+IV  WQ  Y+ PRIE     ++  +  +Q               
Sbjct: 2   MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGATPA 61

Query: 47  --NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
             +    S  AV      QAL+ +PRV +  P+L GSINL GA+ DDL L+GYH  V  +
Sbjct: 62  PASGTAPSGQAVATATLEQALAKTPRVAIDTPALSGSINLAGARLDDLKLKGYHETVDDS 121

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
           SPI+TL SP+ TK+ YF EL Y+ +     +P ++T+W    G  LT  TP+ L + N  
Sbjct: 122 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGASTLWTAPEGAKLTEKTPVTLSYTNDK 181

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
            + F RTIS+DE Y+F I D V N     +  S  GR+ R+   T  + + + EGFI V+
Sbjct: 182 GLTFTRTISVDERYMFTIADKVANTGQAPVSLSSYGRVTRYNKPTTPSAYVLHEGFIGVI 241

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
           GD  L+E KY+ +EK ++     +  WLGI+DKYWA+  +P + +++ ++F + SDG  R
Sbjct: 242 GDDGLIESKYTAVEKEAVMPAKSTGGWLGITDKYWAATIVPPQASAYEARFSHFSDGQPR 301

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           YQA +  +  T+ PG+S+   N +FAGAKE P I  YE   +IPRF+ LIDWGWFYFI K
Sbjct: 302 YQADYKDDAFTVAPGQSVELKNLVFAGAKEVPVIDGYEASYSIPRFDRLIDWGWFYFITK 361

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           PMF LM +F+   GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF 
Sbjct: 362 PMFKLMDFFFRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFG 421

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                 LQ+A +QLYK   INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWI+D
Sbjct: 422 D-DRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIQD 480

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+A DPT I  LFG+LPF  P F+H+G+WP+IM ++MF+QM+M+P P D  QAMI NWMP
Sbjct: 481 LSAPDPTTIVNLFGLLPFTAPTFLHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFNWMP 540

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK HG +I L D L+  F + 
Sbjct: 541 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRHGVKIELFDNLKGLFRRK 593


>gi|254712779|ref|ZP_05174590.1| putative inner membrane protein translocase component YidC
           [Brucella ceti M644/93/1]
 gi|254715848|ref|ZP_05177659.1| putative inner membrane protein translocase component YidC
           [Brucella ceti M13/05/1]
 gi|261217609|ref|ZP_05931890.1| inner membrane protein oxaA [Brucella ceti M13/05/1]
 gi|261320486|ref|ZP_05959683.1| inner membrane protein oxaA [Brucella ceti M644/93/1]
 gi|260922698|gb|EEX89266.1| inner membrane protein oxaA [Brucella ceti M13/05/1]
 gi|261293176|gb|EEX96672.1| inner membrane protein oxaA [Brucella ceti M644/93/1]
          Length = 609

 Score =  468 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 267/606 (44%), Positives = 379/606 (62%), Gaps = 28/606 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41
           ME   N+F+ IALS++I+  WQ FY+ P+ E    + +  +                   
Sbjct: 1   MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSTGD 60

Query: 42  ------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95
                          ++ AA     R  A++ SPR+E+  PSL GSINL GA+ DDL L+
Sbjct: 61  TPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYLK 120

Query: 96  GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155
            YH  VS  SP + LL+PS+ K  YF EL +        +P  NTVW +     LTP+TP
Sbjct: 121 KYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPSTP 180

Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNTF 214
           + L + N  N+ F+R IS+D+ Y+F + DT+ NN    +  +  GR+   ++P+ A+ T+
Sbjct: 181 VTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASATY 240

Query: 215 GVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273
            + EG I V+G   L E KY+   +   IS       W+GI+DKYWA+  IP ++  F  
Sbjct: 241 VLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFTG 300

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
           +F + ++   RYQ+   +  +T+ PG+S    N +FAGAK   TI +YE    I +F++L
Sbjct: 301 RFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDLL 360

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           IDWGWFYFI KPMF L+ + Y   GNFG+AI++ TV +K LFFPLA K Y S A MK +Q
Sbjct: 361 IDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLMQ 420

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           PK+ E+REK+     +  Q+AM++LYK   INPLAGCWP+L+QIPVFFA+YKV+ +++EM
Sbjct: 421 PKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIEM 479

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           RHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P D
Sbjct: 480 RHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPPD 539

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
             QA I  WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK  G +I L D L+  
Sbjct: 540 PTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKGL 599

Query: 574 FSKNYN 579
           F +   
Sbjct: 600 FRRKPK 605


>gi|154245865|ref|YP_001416823.1| putative inner membrane protein translocase component YidC
           [Xanthobacter autotrophicus Py2]
 gi|154159950|gb|ABS67166.1| 60 kDa inner membrane insertion protein [Xanthobacter autotrophicus
           Py2]
          Length = 616

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 238/617 (38%), Positives = 348/617 (56%), Gaps = 38/617 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM---------------------NNERKN 39
           M  N N F+AI LS+ I+  WQ F+  P+ E                             
Sbjct: 1   MSDNRNMFIAIGLSLAILIGWQFFFGIPQAERQRQAAEQQRIAQQAQQPAPGATPGATPG 60

Query: 40  IQTVKQPNQVDNSYAAVLIDD--------RAQALSMSPRVELKNPSLIGSINLKGAQFDD 91
                 P     S                R +AL+++PR  ++   L GSI LKG + DD
Sbjct: 61  TTAGAAPGATPGSAGVPQAGSPVPARPLTREEALALTPRAAIETQRLKGSIALKGGRVDD 120

Query: 92  LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151
           L L  YH  V   SP + LLSPS   N ++AE  + + A    +          +   LT
Sbjct: 121 LLLTEYHETVDPKSPNIVLLSPSGAPNPFYAEFGWTAAAGTG-VKVPGPDTVWTTSGTLT 179

Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
             TP+ L + N   ++F RT ++D+HY+F + D V N +   +   P   + RH      
Sbjct: 180 EKTPLTLSWDNGAGLIFHRTYTIDDHYMFAVKDEVENKTGAAVTLYPYALVSRHGIPHVA 239

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
             + + EG I VLGD  L E  Y+ ++K     F  +  WLGI+DKYWA+  IP +    
Sbjct: 240 GFYILHEGLIGVLGDSGLQEITYAKMDKEKPHTFAATGGWLGITDKYWAATVIPDQSVKV 299

Query: 272 HSQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
            ++F   +  G   +QA + A  +T+ PG ++     LFAGAK    +  Y+    I RF
Sbjct: 300 DAKFSTSTFAGTQTFQADYLAAPLTVEPGATVAAKGQLFAGAKVVQVVDGYKTKYGIDRF 359

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++LIDWGWFYFI KP+F+ + + Y LVGNFG+AI++ TV +K LFFPLA K Y S A MK
Sbjct: 360 DLLIDWGWFYFITKPLFLAIDWLYRLVGNFGVAILIITVALKGLFFPLANKSYASMAKMK 419

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            +QP++  +RE++     +  Q+A+++LYK   INP+AGC PI++QIPVFFA+YKV+ ++
Sbjct: 420 AVQPEVTAIRERYADDKVK-QQQALMELYKKEKINPVAGCLPIVIQIPVFFALYKVLFVT 478

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQ 504
           +EMRHAPF+GWI+DL+A DPT IF LFG++P+          ++ +G WPIIM ++M++Q
Sbjct: 479 IEMRHAPFFGWIRDLSAPDPTTIFNLFGLIPWDPSSVPVLGGYLMLGAWPIIMGITMWVQ 538

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           MK++P P D  Q MI NWMP++F F L+ F AGL+IYW+W+N +S+ QQA+IMK +G +I
Sbjct: 539 MKLNPAPPDPTQQMIFNWMPIIFTFMLAHFAAGLVIYWAWNNTLSVSQQAMIMKRNGVKI 598

Query: 565 GLIDRLRSTFSKNYNSQ 581
            L D ++S F K   ++
Sbjct: 599 ELWDNIKSAFKKKQPAK 615


>gi|62317852|ref|YP_223705.1| putative inner membrane protein translocase component YidC
           [Brucella abortus bv. 1 str. 9-941]
 gi|83269831|ref|YP_419122.1| putative inner membrane protein translocase component YidC
           [Brucella melitensis biovar Abortus 2308]
 gi|163845137|ref|YP_001622792.1| putative inner membrane protein translocase component YidC
           [Brucella suis ATCC 23445]
 gi|189023102|ref|YP_001932843.1| putative inner membrane protein translocase component YidC
           [Brucella abortus S19]
 gi|225629472|ref|ZP_03787505.1| Inner membrane protein oxaA [Brucella ceti str. Cudo]
 gi|237817392|ref|ZP_04596384.1| Inner membrane protein oxaA [Brucella abortus str. 2308 A]
 gi|254690662|ref|ZP_05153916.1| putative inner membrane protein translocase component YidC
           [Brucella abortus bv. 6 str. 870]
 gi|254696033|ref|ZP_05157861.1| putative inner membrane protein translocase component YidC
           [Brucella abortus bv. 3 str. Tulya]
 gi|254699142|ref|ZP_05160970.1| putative inner membrane protein translocase component YidC
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700218|ref|ZP_05162046.1| putative inner membrane protein translocase component YidC
           [Brucella suis bv. 5 str. 513]
 gi|254705520|ref|ZP_05167348.1| putative inner membrane protein translocase component YidC
           [Brucella pinnipedialis M163/99/10]
 gi|254710751|ref|ZP_05172562.1| putative inner membrane protein translocase component YidC
           [Brucella pinnipedialis B2/94]
 gi|254732586|ref|ZP_05191164.1| putative inner membrane protein translocase component YidC
           [Brucella abortus bv. 4 str. 292]
 gi|256015782|ref|YP_003105791.1| putative inner membrane protein translocase component YidC
           [Brucella microti CCM 4915]
 gi|256029134|ref|ZP_05442748.1| putative inner membrane protein translocase component YidC
           [Brucella pinnipedialis M292/94/1]
 gi|256058817|ref|ZP_05449033.1| putative inner membrane protein translocase component YidC
           [Brucella neotomae 5K33]
 gi|256111044|ref|ZP_05452106.1| putative inner membrane protein translocase component YidC
           [Brucella melitensis bv. 3 str. Ether]
 gi|256157326|ref|ZP_05455244.1| putative inner membrane protein translocase component YidC
           [Brucella ceti M490/95/1]
 gi|256253696|ref|ZP_05459232.1| putative inner membrane protein translocase component YidC
           [Brucella ceti B1/94]
 gi|256255844|ref|ZP_05461380.1| putative inner membrane protein translocase component YidC
           [Brucella abortus bv. 9 str. C68]
 gi|260167774|ref|ZP_05754585.1| putative inner membrane protein translocase component YidC
           [Brucella sp. F5/99]
 gi|260545087|ref|ZP_05820908.1| inner membrane protein [Brucella abortus NCTC 8038]
 gi|260756233|ref|ZP_05868581.1| inner membrane protein oxaA [Brucella abortus bv. 6 str. 870]
 gi|260760398|ref|ZP_05872746.1| inner membrane protein oxaA [Brucella abortus bv. 4 str. 292]
 gi|260763638|ref|ZP_05875970.1| inner membrane protein oxaA [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882057|ref|ZP_05893671.1| inner membrane protein oxaA [Brucella abortus bv. 9 str. C68]
 gi|261216465|ref|ZP_05930746.1| inner membrane protein oxaA [Brucella abortus bv. 3 str. Tulya]
 gi|261220833|ref|ZP_05935114.1| inner membrane protein oxaA [Brucella ceti B1/94]
 gi|261312924|ref|ZP_05952121.1| inner membrane protein oxaA [Brucella pinnipedialis M163/99/10]
 gi|261318319|ref|ZP_05957516.1| inner membrane protein oxaA [Brucella pinnipedialis B2/94]
 gi|261322754|ref|ZP_05961951.1| inner membrane protein oxaA [Brucella neotomae 5K33]
 gi|261750713|ref|ZP_05994422.1| inner membrane protein oxaA [Brucella suis bv. 5 str. 513]
 gi|261757211|ref|ZP_06000920.1| inner membrane protein [Brucella sp. F5/99]
 gi|265986117|ref|ZP_06098674.1| inner membrane protein oxaA [Brucella pinnipedialis M292/94/1]
 gi|265992579|ref|ZP_06105136.1| inner membrane protein oxaA [Brucella melitensis bv. 3 str. Ether]
 gi|265995811|ref|ZP_06108368.1| inner membrane protein oxaA [Brucella ceti M490/95/1]
 gi|297249212|ref|ZP_06932913.1| preprotein translocase YidC subunit [Brucella abortus bv. 5 str.
           B3196]
 gi|62198045|gb|AAX76344.1| inner-membrane protein, 60 kDa [Brucella abortus bv. 1 str. 9-941]
 gi|82940105|emb|CAJ13152.1| 60 kDa inner membrane protein [Brucella melitensis biovar Abortus
           2308]
 gi|163675860|gb|ABY39970.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|189021676|gb|ACD74397.1| 60 kDa inner membrane protein [Brucella abortus S19]
 gi|225615968|gb|EEH13017.1| Inner membrane protein oxaA [Brucella ceti str. Cudo]
 gi|237788205|gb|EEP62421.1| Inner membrane protein oxaA [Brucella abortus str. 2308 A]
 gi|255998442|gb|ACU50129.1| putative inner membrane protein translocase component YidC
           [Brucella microti CCM 4915]
 gi|260098358|gb|EEW82232.1| inner membrane protein [Brucella abortus NCTC 8038]
 gi|260670716|gb|EEX57656.1| inner membrane protein oxaA [Brucella abortus bv. 4 str. 292]
 gi|260674059|gb|EEX60880.1| inner membrane protein oxaA [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676341|gb|EEX63162.1| inner membrane protein oxaA [Brucella abortus bv. 6 str. 870]
 gi|260871585|gb|EEX78654.1| inner membrane protein oxaA [Brucella abortus bv. 9 str. C68]
 gi|260918072|gb|EEX84933.1| inner membrane protein oxaA [Brucella abortus bv. 3 str. Tulya]
 gi|260919417|gb|EEX86070.1| inner membrane protein oxaA [Brucella ceti B1/94]
 gi|261297542|gb|EEY01039.1| inner membrane protein oxaA [Brucella pinnipedialis B2/94]
 gi|261298734|gb|EEY02231.1| inner membrane protein oxaA [Brucella neotomae 5K33]
 gi|261301950|gb|EEY05447.1| inner membrane protein oxaA [Brucella pinnipedialis M163/99/10]
 gi|261737195|gb|EEY25191.1| inner membrane protein [Brucella sp. F5/99]
 gi|261740466|gb|EEY28392.1| inner membrane protein oxaA [Brucella suis bv. 5 str. 513]
 gi|262550108|gb|EEZ06269.1| inner membrane protein oxaA [Brucella ceti M490/95/1]
 gi|262763449|gb|EEZ09481.1| inner membrane protein oxaA [Brucella melitensis bv. 3 str. Ether]
 gi|264658314|gb|EEZ28575.1| inner membrane protein oxaA [Brucella pinnipedialis M292/94/1]
 gi|297173081|gb|EFH32445.1| preprotein translocase YidC subunit [Brucella abortus bv. 5 str.
           B3196]
          Length = 610

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 267/607 (43%), Positives = 379/607 (62%), Gaps = 29/607 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41
           ME   N+F+ IALS++I+  WQ FY+ P+ E    + +  +                   
Sbjct: 1   MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60

Query: 42  -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94
                           ++ AA     R  A++ SPR+E+  PSL GSINL GA+ DDL L
Sbjct: 61  DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120

Query: 95  RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154
           + YH  VS  SP + LL+PS+ K  YF EL +        +P  NTVW +     LTP+T
Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180

Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213
           P+ L + N  N+ F+R IS+D+ Y+F + DT+ NN    +  +  GR+   ++P+ A+ T
Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240

Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
           + + EG I V+G   L E KY+   +   IS       W+GI+DKYWA+  IP ++  F 
Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
            +F + ++   RYQ+   +  +T+ PG+S    N +FAGAK   TI +YE    I +F++
Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           LIDWGWFYFI KPMF L+ + Y   GNFG+AI++ TV +K LFFPLA K Y S A MK +
Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QPK+ E+REK+     +  Q+AM++LYK   INPLAGCWP+L+QIPVFFA+YKV+ +++E
Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P 
Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  QA I  WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK  G +I L D L+ 
Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599

Query: 573 TFSKNYN 579
            F +   
Sbjct: 600 LFRRKPK 606


>gi|148558174|ref|YP_001257934.1| putative inner membrane protein translocase component YidC
           [Brucella ovis ATCC 25840]
 gi|148369459|gb|ABQ62331.1| inner-membrane protein, 60 kDa [Brucella ovis ATCC 25840]
          Length = 610

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 266/607 (43%), Positives = 379/607 (62%), Gaps = 29/607 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41
           ME   N+F+ IALS++I+  WQ FY+ P+ E    + +  +                   
Sbjct: 1   MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60

Query: 42  -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94
                           ++ AA     R  A++ SPR+E+  PSL GSINL GA+ DDL L
Sbjct: 61  DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120

Query: 95  RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154
           + YH  VS  SP + LL+PS+ K  YF EL +        +P  NTVW +     LTP+T
Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFAGNDATGAVPGPNTVWVVEGNNKLTPST 180

Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213
           P+ L + N  ++ F+R IS+D+ Y+F + DT+ NN    +  +  GR+   ++P+ A+ T
Sbjct: 181 PVTLTYTNDKSLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240

Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
           + + EG I V+G   L E KY+   +   IS       W+GI+DKYWA+  IP ++  F 
Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
            +F + ++   RYQ+   +  +T+ PG+S    N +FAGAK   TI +YE    I +F++
Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           LIDWGWFYFI KPMF L+ + Y   GNFG+AI++ TV +K LFFPLA K Y S A MK +
Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QPK+ E+REK+     +  Q+AM++LYK   INPLAGCWP+L+QIPVFFA+YKV+ +++E
Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P 
Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  QA I  WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK  G +I L D L+ 
Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599

Query: 573 TFSKNYN 579
            F +   
Sbjct: 600 LFRRKPK 606


>gi|294853976|ref|ZP_06794648.1| preprotein translocase YidC subunit [Brucella sp. NVSL 07-0026]
 gi|294819631|gb|EFG36631.1| preprotein translocase YidC subunit [Brucella sp. NVSL 07-0026]
          Length = 610

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 268/607 (44%), Positives = 379/607 (62%), Gaps = 29/607 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41
           ME   N+F+ IALS++I+  WQ FY+ P+ E    + +  +                   
Sbjct: 1   MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60

Query: 42  -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94
                           ++ AA     R  A++ SPR+E+  PSL GSINL GA+ DDL L
Sbjct: 61  DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120

Query: 95  RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154
           + YH  VS  SP + LL+PS+ K  YF EL +        +P  NTVW +     LTP+T
Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180

Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213
           P+ L + N  N+ F+R IS+D+ Y+F + DT+ NN    +  +  GR+   ++P+ A+ T
Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240

Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
           + + EG I V+G   L E KYS   +   IS       W+GI+DKYWA+  IP ++  F 
Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYSKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
            +F + ++   RYQ+   +  +T+ PG+S    N +FAGAK   TI +YE    I +F++
Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           LIDWGWFYFI KPMF L+ + Y   GNFG+AI++ TV +K LFFPLA K Y S A MK +
Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QPK+ E+REK+     +  Q+AM++LYK   INPLAGCWP+L+QIPVFFA+YKV+ +++E
Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P 
Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  QA I  WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK  G +I L D L+ 
Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599

Query: 573 TFSKNYN 579
            F +   
Sbjct: 600 LFRRKPK 606


>gi|144899247|emb|CAM76111.1| 60 kDa inner membrane insertion protein [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 575

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 218/577 (37%), Positives = 332/577 (57%), Gaps = 15/577 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD--------NS 52
           M    N F+AIALSV+I++ +Q  +        +                         +
Sbjct: 1   MNEQRNLFLAIALSVLILFGFQWLFPSKTPAPESAPATTAAGTPPVPTSGDAVVPAPVQT 60

Query: 53  YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
            A + +  R  AL+ + R+ +  P+L GS+++ GA+ DDL L GYH      S  + LLS
Sbjct: 61  AAQMAVKSRTDALATAKRIRINTPTLHGSLSVTGARLDDLTLAGYHETADPTSKEIELLS 120

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
           P+   + Y AE  +V     ++ P  +TVW++  G  L+P + + L + N + + F RT+
Sbjct: 121 PTGAAHPYHAEFGWVPVDAGVKTPGPDTVWSVAQGNELSPGSTVVLNWDNGDGLRFVRTV 180

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
           S+DE+Y+F+I   V N     +   P G I R         + + EG + V    +L E 
Sbjct: 181 SVDENYMFQIAQRVENYGTKPVTLHPFGLISRTGTPKTEGMYILHEGPLGVFD-GTLKEH 239

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSA 291
           KY D++K S      +  W+GI+DKYW +  +P ++     +F +   D   RYQ  F+ 
Sbjct: 240 KYDDLKKLSTERNKTTGGWIGITDKYWLTALVPDQKEELTGRFVHQRADNADRYQVDFTG 299

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
               + PG +  TT  LFAGAK    + HY +   + RF++ ID+GWFYF+ KP F L+ 
Sbjct: 300 AAKVVAPGAAAETTFHLFAGAKLVSLLDHYTEKFGVERFDLAIDFGWFYFLTKPFFYLLK 359

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
              + +GN G+AI+  TV +K + FPLA K Y S + MK +QP++  L+E+F       L
Sbjct: 360 MMNSGLGNMGLAILALTVLIKGIMFPLANKSYASMSKMKLLQPQVKALQERFGDDKV-RL 418

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
           Q+ M+ LYK   +NP++GC PIL+QIPVFFA+YKV+ +++EMRHAPF+GWIKDL+A DPT
Sbjct: 419 QQEMMALYKKEKVNPVSGCLPILIQIPVFFALYKVLFVAIEMRHAPFYGWIKDLSAQDPT 478

Query: 472 NIFTLFGILPFYL----PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527
            I  LFG++P+      P F+H+G+WP+IM  +M++Q K++P P D  QA ++ ++PVVF
Sbjct: 479 TIMNLFGLIPWDPALYLPAFLHIGVWPLIMGATMWLQQKLNPQPLDPVQAKMMMFLPVVF 538

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            F L  F AGL+IYW+WSN++SI QQ VIM+ +G + 
Sbjct: 539 TFMLGQFAAGLVIYWAWSNILSIAQQWVIMRKYGVKP 575


>gi|23500746|ref|NP_700186.1| putative inner membrane protein translocase component YidC
           [Brucella suis 1330]
 gi|38503028|sp|Q8FV29|OXAA_BRUSU RecName: Full=Inner membrane protein oxaA
 gi|23464400|gb|AAN34191.1| inner-membrane protein, 60 kDa [Brucella suis 1330]
          Length = 610

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 267/607 (43%), Positives = 379/607 (62%), Gaps = 29/607 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41
           ME   N+F+ IALS++I+  WQ FY+ P+ E    + +  +                   
Sbjct: 1   MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60

Query: 42  -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94
                           ++ AA     R  A++ SPR+E+  PSL GSINL GA+ DDL L
Sbjct: 61  DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120

Query: 95  RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154
           + YH  VS  SP + LL+PS+ K  YF EL +        +P  NTVW +     LTP+T
Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180

Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213
           P+ L + N  N+ F+R IS+D+ Y+F + DT+ NN    +  +  GR+   ++P+ A+ T
Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240

Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
           + + EG I V+G   L E KY+   +   IS       W+GI+DKYWA+  IP ++  F 
Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIKDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
            +F + ++   RYQ+   +  +T+ PG+S    N +FAGAK   TI +YE    I +F++
Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           LIDWGWFYFI KPMF L+ + Y   GNFG+AI++ TV +K LFFPLA K Y S A MK +
Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QPK+ E+REK+     +  Q+AM++LYK   INPLAGCWP+L+QIPVFFA+YKV+ +++E
Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P 
Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  QA I  WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK  G +I L D L+ 
Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599

Query: 573 TFSKNYN 579
            F +   
Sbjct: 600 LFRRKPK 606


>gi|306846225|ref|ZP_07478787.1| inner membrane protein translocase component YidC [Brucella sp.
           BO1]
 gi|306273476|gb|EFM55337.1| inner membrane protein translocase component YidC [Brucella sp.
           BO1]
          Length = 610

 Score =  467 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 267/607 (43%), Positives = 380/607 (62%), Gaps = 29/607 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41
           ME   N+F+ IALS++I+  WQ FY+ P+ E    + +  +                   
Sbjct: 1   MENKRNFFITIALSILILTLWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60

Query: 42  -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94
                           ++ AA     R  A++ SPR+E+  PSL GSINL GA+ DDL L
Sbjct: 61  DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120

Query: 95  RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154
           + YH  VS  SP + LL+PS+ K  YF EL +        +P  NTVW +   K LTP+T
Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGTVPGPNTVWVVEGNKKLTPST 180

Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213
           P+ L + N  N+ F+R IS+D+ Y+F + DT+ N+    +  +  GR+   ++P+ A+ T
Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINDGGSTVSLASYGRVTRFNQPEHASAT 240

Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
           + + EG I V+G   L E KY+   +   IS       W+GI+DKYWA+  IP ++  F 
Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
            +F + ++   RYQ+   +  +T+ PG+S    N +FAGAK   TI +YE    I +F++
Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           LIDWGWFYFI KPMF L+ + Y   GNFG+AI++ TV +K LFFPLA K Y S A MK +
Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QPK+ E+REK+     +  Q+AM++LYK   INPLAGCWP+L+QIPVFFA+YKV+ +++E
Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P 
Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  QA I  WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK  G +I L D L+ 
Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599

Query: 573 TFSKNYN 579
            F +   
Sbjct: 600 LFRRKPK 606


>gi|254720149|ref|ZP_05181960.1| putative inner membrane protein translocase component YidC
           [Brucella sp. 83/13]
 gi|265985155|ref|ZP_06097890.1| inner membrane protein oxaA [Brucella sp. 83/13]
 gi|306839545|ref|ZP_07472352.1| inner membrane protein translocase component YidC [Brucella sp. NF
           2653]
 gi|264663747|gb|EEZ34008.1| inner membrane protein oxaA [Brucella sp. 83/13]
 gi|306405377|gb|EFM61649.1| inner membrane protein translocase component YidC [Brucella sp. NF
           2653]
          Length = 610

 Score =  467 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 266/607 (43%), Positives = 379/607 (62%), Gaps = 29/607 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41
           ME   N+F+ IALS++I+  WQ FY+ P+ E    + +  +                   
Sbjct: 1   MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60

Query: 42  -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94
                           ++ AA     R  A++ SPR+E+  PSL GSINL GA+ DDL L
Sbjct: 61  DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120

Query: 95  RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154
           + YH  VS  SP + LL+PS+ K  YF EL +        +P  NTVW +     LTP+T
Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGTVPGPNTVWVVEGNNKLTPST 180

Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213
           P+ L + N  N+ F+R IS+D+ Y+F + DT+ N+    +  +  GR+   ++P+ A+ T
Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINDGGSTVSLASYGRVTRFNQPEHASAT 240

Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
           + + EG I V+G   L E KY+   +   IS       W+GI+DKYWA+  IP ++  F 
Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
            +F + ++   RYQ+   +  +T+ PG+S    N +FAGAK   TI +YE    I +F++
Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           LIDWGWFYFI KPMF L+ + Y   GNFG+AI++ TV +K LFFPLA K Y S A MK +
Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QPK+ E+REK+     +  Q+AM++LYK   INPLAGCWP+L+QIPVFFA+YKV+ +++E
Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P 
Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  QA I  WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK  G +I L D L+ 
Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599

Query: 573 TFSKNYN 579
            F +   
Sbjct: 600 LFRRKPK 606


>gi|90422337|ref|YP_530707.1| putative inner membrane protein translocase component YidC
           [Rhodopseudomonas palustris BisB18]
 gi|90104351|gb|ABD86388.1| protein translocase subunit yidC [Rhodopseudomonas palustris
           BisB18]
          Length = 632

 Score =  467 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 245/629 (38%), Positives = 359/629 (57%), Gaps = 50/629 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51
           M  N N  +A+ LS +++  WQ F+  P++E+        ++                  
Sbjct: 1   MTDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAELASKSQAVNPAQPQGAQPATPAA 60

Query: 52  -----------------------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQ 88
                                    A   +  R  AL+ SPRV++  P L GSI LKGA+
Sbjct: 61  PGAAIPQPNAATAPAGSAPNAIQPQANTPVVSREAALAASPRVKIDTPRLSGSIALKGAR 120

Query: 89  FDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI-ELPNSNTVWNLISG 147
            DD+ L  +   V   SP + L SPS + N Y+AE  +V+ A    ++P+ NT W     
Sbjct: 121 IDDIALVQFRETVDPKSPAIELFSPSGSANPYYAEFGWVAAAGTSVKIPDQNTQWEQDGT 180

Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207
             LTP  P+ L + N   + F RTI++DE YLF + D VTN     +   P   I RH  
Sbjct: 181 GSLTPNHPVTLKYDNGEGLTFRRTITIDERYLFTMKDEVTNVGNAPVTLYPFALISRHGT 240

Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267
                 + + EG +  LG++ L E  YS I+++   NF  +N WLGI+DKYWA+  +P  
Sbjct: 241 PHVAGYYILHEGLVGYLGEQGLQEYGYSKIDEAKAVNFKVTNGWLGITDKYWAAALLPDT 300

Query: 268 ETSFHSQFKYL-SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT--------- 317
                ++F    ++    YQ  +  +  TI  G + T    LFAGAKE  T         
Sbjct: 301 SAQLQARFSSNLANNVRTYQTDYLQDAQTIAIGGTGTANARLFAGAKEAGTVGINFPALG 360

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           +  Y KDL +  F++LIDWGWFYFI KPMF+ + +F++LVGNFGIAI+L TV +KLLF P
Sbjct: 361 LGGYNKDLGLNHFDLLIDWGWFYFITKPMFVALDFFFHLVGNFGIAILLVTVIIKLLFLP 420

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437
           LA K Y S A MK IQP++  L+E+      +  Q+ M+++Y+   INP+AGC P+LLQI
Sbjct: 421 LANKSYASMAKMKAIQPQLAALKERHPDDKAK-QQQEMMEIYRKEKINPVAGCLPVLLQI 479

Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVG 491
           PVFF++YKV+ +++EMRHAPF+GWI DL+A DPTN+F LFG+L F          ++ +G
Sbjct: 480 PVFFSLYKVLFVTIEMRHAPFYGWIHDLSAPDPTNLFNLFGLLAFDPTHVPVIGHYLVLG 539

Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
            WPI+M ++M++QMK++P P D  Q MI  WMP++F F L+SFPAGL+IYW+W+N++S+V
Sbjct: 540 AWPIVMGITMWVQMKLNPTPPDPTQQMIFAWMPLIFTFMLASFPAGLVIYWAWNNLLSVV 599

Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           QQ  IM+ +G ++ L D L+++F++   +
Sbjct: 600 QQGYIMRRNGVKVELFDNLKASFARKKKN 628


>gi|161621071|ref|YP_001594957.1| putative inner membrane protein translocase component YidC
           [Brucella canis ATCC 23365]
 gi|254703339|ref|ZP_05165167.1| putative inner membrane protein translocase component YidC
           [Brucella suis bv. 3 str. 686]
 gi|260567731|ref|ZP_05838200.1| inner membrane protein oxaA [Brucella suis bv. 4 str. 40]
 gi|261753969|ref|ZP_05997678.1| inner membrane protein oxaA [Brucella suis bv. 3 str. 686]
 gi|161337882|gb|ABX64186.1| Inner membrane protein oxaA [Brucella canis ATCC 23365]
 gi|260154396|gb|EEW89477.1| inner membrane protein oxaA [Brucella suis bv. 4 str. 40]
 gi|261743722|gb|EEY31648.1| inner membrane protein oxaA [Brucella suis bv. 3 str. 686]
          Length = 610

 Score =  467 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 267/607 (43%), Positives = 379/607 (62%), Gaps = 29/607 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41
           ME   N+F+ IALS++I+  WQ FY+ P+ E    + +  +                   
Sbjct: 1   MENKRNFFITIALSILILALWQVFYLGPKTEVQREQARIEEQQRQAQQAAQNRQASSSTG 60

Query: 42  -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94
                           ++ AA     R  A++ SPR+E+  PSL GSINL GA+ DDL L
Sbjct: 61  DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120

Query: 95  RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154
           + YH  VS  SP + LL+PS+ K  YF EL +        +P  NTVW +     LTP+T
Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180

Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213
           P+ L + N  N+ F+R IS+D+ Y+F + DT+ NN    +  +  GR+   ++P+ A+ T
Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240

Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
           + + EG I V+G   L E KY+   +   IS       W+GI+DKYWA+  IP ++  F 
Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIKDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
            +F + ++   RYQ+   +  +T+ PG+S    N +FAGAK   TI +YE    I +F++
Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           LIDWGWFYFI KPMF L+ + Y   GNFG+AI++ TV +K LFFPLA K Y S A MK +
Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QPK+ E+REK+     +  Q+AM++LYK   INPLAGCWP+L+QIPVFFA+YKV+ +++E
Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P 
Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  QA I  WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK  G +I L D L+ 
Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599

Query: 573 TFSKNYN 579
            F +   
Sbjct: 600 LFRRKPK 606


>gi|114765427|ref|ZP_01444542.1| putative inner membrane protein translocase component YidC
           [Pelagibaca bermudensis HTCC2601]
 gi|114542270|gb|EAU45300.1| putative inner membrane protein translocase component YidC
           [Roseovarius sp. HTCC2601]
          Length = 611

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 206/606 (33%), Positives = 326/606 (53%), Gaps = 29/606 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI------QTVKQPNQVDNSYAA 55
           ++N N  +A  LS +++  W   +  P  +  +    N        T   P+   ++   
Sbjct: 3   DQNKNLLIATGLSFVVILVWFLLFPPPEEQLQDQAGPNAVETVEGDTATTPSAAPSATTG 62

Query: 56  VLIDDRAQALSM---SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
                 A A +    +PRV +    L GSI+L G + D+L L+ Y + +  +SP V +L 
Sbjct: 63  GGDTAAAPAQAETVDAPRVAIDTDRLGGSISLTGGRIDELILKDYTVTLDEDSPNVQILE 122

Query: 113 PSNTKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170
           P    N Y+A   +   +     ++P +NT W L SG  L+  +P+ L + +   ++F R
Sbjct: 123 PVGGGNPYYALYGWAPGSGLGLDDVPGANTAWELESGDSLSVDSPVTLRWDSPAGLVFRR 182

Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230
           TIS+DE ++F +  +V N     +  +P G I RH        F V    +  + D  L 
Sbjct: 183 TISIDEDFMFSVTQSVENAGEGTVSAAPYGIIARHGEPADLKNFFVLHEGVVAIADGKLS 242

Query: 231 EQKYSDIEKSSISN---------FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281
           E  YSD+    ++              N W+G +D YW +  IP +   F    KY  + 
Sbjct: 243 EIGYSDMPDMDVNQSEGARAEVTQVTENGWIGFTDHYWMTTLIPQQGAPFKQAAKY-DER 301

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
              YQ +     +T+ PG++   T  LFAGAKE+ TI  Y +D  + RF   IDWGWF+F
Sbjct: 302 RDIYQTEAVLPTMTLAPGETQEVTTQLFAGAKEYETIRDY-EDAGVVRFIDSIDWGWFFF 360

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           + KP+F ++   + L+GN G +I+  T+ +K + FPLA K YVS A MK +QP++++L+E
Sbjct: 361 LTKPIFWMLHQIHLLIGNMGWSIIGLTLIIKAILFPLAYKSYVSMAKMKELQPEMEKLKE 420

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           K      Q LQ+ M+ LYK   +NP +GC PILLQIP+FF++YKVI ++ E+RHAP++G 
Sbjct: 421 KAGD-DRQKLQQEMMALYKKEKVNPASGCLPILLQIPIFFSLYKVIFVAFELRHAPWFGP 479

Query: 462 IKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
            +DL+  DPT++F LFG+LP+  P        + +GI P+++ +SM++Q K++P PAD  
Sbjct: 480 FQDLSTPDPTSLFNLFGLLPWAAPAPGTTLALVFIGILPLLLGISMWLQQKLNPAPADPT 539

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
           Q MI  WMP VF+F L  F +GL++YW  +N I+  QQ +IM+  G +  +   + S F 
Sbjct: 540 QKMIFAWMPWVFMFMLGGFASGLVVYWITNNTITFTQQYLIMRSQGYKPDVFGNIVSGFK 599

Query: 576 KNYNSQ 581
           +   + 
Sbjct: 600 RKPKAD 605


>gi|304392412|ref|ZP_07374353.1| inner membrane protein OxaA [Ahrensia sp. R2A130]
 gi|303295516|gb|EFL89875.1| inner membrane protein OxaA [Ahrensia sp. R2A130]
          Length = 612

 Score =  466 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 257/612 (41%), Positives = 368/612 (60%), Gaps = 32/612 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N+ +A  LS+ +V+AWQ   + PR+E      +  Q V++    +          
Sbjct: 1   MDNQRNFILAAVLSLGVVFAWQALVINPRMEAERAAIEAQQKVEEARTAEAESVPGATTA 60

Query: 61  RAQALSMSP----------------------------RVELKNPSLIGSINLKGAQFDDL 92
                                                RV L +P L GS+NL+G + DDL
Sbjct: 61  PQTGAEAGAGVPAGQATSGDGAVPGAAPAASAQSSAGRVPLASPRLEGSVNLQGGRIDDL 120

Query: 93  NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152
            L  Y   V   SP + LL+P+   +AYFAE  Y       +LP  +T+W L +G+ LTP
Sbjct: 121 RLLDYRETVDDTSPNIQLLTPAGNPDAYFAEFGYSPNEAAGQLPGPSTIWQLAAGERLTP 180

Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212
            T I L + N   + F RTI++D+ Y+F I   V N S   +   P GRI R+       
Sbjct: 181 ETSISLQYVNDKGLTFTRTIAMDDDYMFTIEQRVKNESGTDVSLRPYGRIARYGKPETAG 240

Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPS--KET 269
            + + EG I  +G++ L E  Y DIE    I+    S+ WLGI+DKYWA+  IP      
Sbjct: 241 IYVLHEGLIGSVGEQGLDEVDYGDIEDDKRITKEPASSGWLGITDKYWATALIPQTKDGG 300

Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329
           +F + + Y S G   YQ+ + A+ ++I  G+    T   FAGAK+   I  Y ++L IP 
Sbjct: 301 TFTAHYNYYSAGTPFYQSDYLASALSIPNGQEQGVTTRFFAGAKKVDIIDAYAENLEIPL 360

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F+ +IDWGWFY++ KP+F+LM++ Y+L+GNFG+AI++ TV VK +FFPLA K Y S ANM
Sbjct: 361 FDKIIDWGWFYWLTKPLFLLMNWVYHLIGNFGVAILVVTVLVKAVFFPLANKSYASMANM 420

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           K +QP++  +RE+ K    +  Q AM++LYK   INP AGCWP+L+QIPVFFAIYKVI +
Sbjct: 421 KKVQPQMTAIREQHKD-DAKAQQAAMMKLYKEEKINPAAGCWPVLIQIPVFFAIYKVIYV 479

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           ++EMRHAPF+GWI+DL+A DPT+IF LFG+LPF +P F+ +G+WP++M ++MF+QM+M+P
Sbjct: 480 TIEMRHAPFFGWIQDLSAPDPTSIFNLFGLLPFEVPLFLMIGVWPLLMGITMFVQMQMNP 539

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            P D  QAMI  W+PVVF F L++FPAGL+IYW+W+N +SI+QQ +IMK  GA+I L D 
Sbjct: 540 APPDPTQAMIFKWLPVVFTFMLATFPAGLVIYWAWNNFLSIIQQGLIMKRQGAKIELWDN 599

Query: 570 LRSTFSKNYNSQ 581
           L+  FSK  +++
Sbjct: 600 LKGIFSKKTDAE 611


>gi|161511178|ref|NP_541252.2| putative inner membrane protein translocase component YidC
           [Brucella melitensis bv. 1 str. 16M]
 gi|256043891|ref|ZP_05446811.1| putative inner membrane protein translocase component YidC
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|260565068|ref|ZP_05835553.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. 16M]
 gi|265990314|ref|ZP_06102871.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. Rev.1]
 gi|38503114|sp|Q8YDA3|OXAA_BRUME RecName: Full=Inner membrane protein oxaA
 gi|260152711|gb|EEW87804.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. 16M]
 gi|263000983|gb|EEZ13673.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. Rev.1]
          Length = 610

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 267/607 (43%), Positives = 378/607 (62%), Gaps = 29/607 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41
           ME   N+F+ IALS++I+  WQ FY+ P+ E    + +  +                   
Sbjct: 1   MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60

Query: 42  -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94
                           ++ AA     R  A++ SPR+E+  PSL GSINL GA+ DDL L
Sbjct: 61  DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120

Query: 95  RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154
           + YH  VS  SP + LL+PS+ K  YF EL +        +P  NTVW +     LTP+T
Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180

Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213
           P+ L + N  N+ F+R IS+D+ Y+F + DT+ NN    +  +  GR+   ++P+ A+ T
Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240

Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
           + + EG I V+G   L E KY+   +   IS       W+GI+DKYWA+  IP ++  F 
Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
            +F + ++   RYQ+   +  +T+ PG+S    N +FAGAK   TI +YE    I +F++
Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           LIDWGWFYFI KPMF L+ + Y   GNFG+AI++ TV +K LFFPLA K Y S A MK +
Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QPK+ E+REK+     +  Q+AM++LYK   INPLAGCWP+L+QIPVFFA+YKV+ +++E
Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM + MF+QM+M+P P 
Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGIIMFLQMRMNPTPP 539

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  QA I  WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK  G +I L D L+ 
Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599

Query: 573 TFSKNYN 579
            F +   
Sbjct: 600 LFRRKPK 606


>gi|159042884|ref|YP_001531678.1| putative inner membrane protein translocase component YidC
           [Dinoroseobacter shibae DFL 12]
 gi|189036349|sp|A8LMA0|OXAA_DINSH RecName: Full=Inner membrane protein oxaA
 gi|157910644|gb|ABV92077.1| preprotein translocase subunit [Dinoroseobacter shibae DFL 12]
          Length = 606

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 227/605 (37%), Positives = 340/605 (56%), Gaps = 28/605 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV--------KQPNQVDNSY 53
           ++N N  +A ALS +++  W   +         N    I             P  V  + 
Sbjct: 3   DQNKNLILATALSFLVILVWFLLFPPEEPVTDPNAPTQITQSGETADVALTPPAAVTEAA 62

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
                   A     +PRV++  P+L GSI+L G + DDL+LR Y+  +  +SPIV LLSP
Sbjct: 63  PGAAPQTAATPTENAPRVQIDTPALEGSISLLGGRIDDLSLRNYNETLEPDSPIVRLLSP 122

Query: 114 SNTKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
            +   AY+A   +      +  ++P +NT+W + SG  LT  TP+ L ++N N ++F RT
Sbjct: 123 VDAPGAYYALYGWAPAGTLSFDDVPGANTLWTVESGDTLTVDTPVVLRWENGNGLIFRRT 182

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
           +++D+ ++F +  +V N +    R  P G I RH      N F + EG +A+    SL+E
Sbjct: 183 LAVDDDFMFTVTQSVENTTETDKRMQPYGIIARHGEPDTINFFVLHEGVVAMAD-GSLIE 241

Query: 232 QKYSDIEKSSISNF---------HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
             Y D+                  E N W+G +DK W +  IP+    F S  KY+    
Sbjct: 242 SDYDDMLDYDFVEREGARAEVEQIEQNGWIGFTDKNWMTTLIPTPGQPFTSVAKYV-GNA 300

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             YQ +      T+  G+++T    LFAGAKE+  I  YE++L I  F   IDWGWFYF+
Sbjct: 301 DIYQTETRLPTQTVPGGQTVTVETRLFAGAKEWEAIRGYERELGIEGFIDSIDWGWFYFL 360

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            KP+F ++     L+GN G+AI++ T+ +K L  PLA K YVS A MK +QP++++L+EK
Sbjct: 361 TKPIFFVLHELNLLIGNMGVAIIVLTLLIKALLLPLAWKSYVSMARMKELQPEMEKLKEK 420

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
                 Q LQ AM++LYK   +NP AGC PILLQIP+FF++YKVI +++E+RHAPF+G  
Sbjct: 421 AGD-DRQKLQVAMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPFFGPF 479

Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           +DL+A DPT+I  LFG+LPF  P        + +GI P+++ +SM++Q K++P P D  Q
Sbjct: 480 QDLSAPDPTSIMNLFGLLPFASPEPGSILALIFIGILPLLLGISMWLQQKLNPAPTDPTQ 539

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
           AMI  W+P VF+F L +F +GLI+YW  +NVI+  QQ  IM+ HG +  L   + ++F K
Sbjct: 540 AMIFAWLPWVFMFMLGTFASGLIVYWIANNVITFAQQYFIMRRHGYKPDLFGNIVASFKK 599

Query: 577 NYNSQ 581
              S+
Sbjct: 600 KKPSE 604


>gi|158425677|ref|YP_001526969.1| putative inner membrane protein translocase component YidC
           [Azorhizobium caulinodans ORS 571]
 gi|158332566|dbj|BAF90051.1| 60 kDa inner membrane protein [Azorhizobium caulinodans ORS 571]
          Length = 607

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 245/607 (40%), Positives = 365/607 (60%), Gaps = 27/607 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY------- 53
           M  N N F+AI LS++I+  WQ F   P+ E+    +   Q  +       S        
Sbjct: 1   MTDNRNMFIAIGLSLVILIGWQYFIALPQAEKQRQIQAQQQAAQATQTPSPSAEAAQGGG 60

Query: 54  -----------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
                      A   +  RAQAL+ +PRV ++ PSL GSI+L+GA+ DDL L  +   V 
Sbjct: 61  AAPTAPGSTGVAGSRVMTRAQALAATPRVAIETPSLRGSISLRGARADDLTLSQFRETVD 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYV-STANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161
             SP + LLSPS +   ++AE  +  +   N+ +P  +T+W   +G  LTP TP+ L + 
Sbjct: 121 PKSPNIVLLSPSGSPEPFYAEFGWTVAPGANLPVPGPDTLWTAEAGAKLTPATPLVLTWD 180

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
           N   +LF RT ++D+ Y+F + D V N           G + RH        + + EG I
Sbjct: 181 NGQGLLFRRTFTVDDRYMFTVKDEVENKGAAAATLYSYGLVSRHGMPHTQGYYILHEGLI 240

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-D 280
            V+GD  L E  Y+ ++ +       +  WLGI+DKYWA+  IP ++    S+F   +  
Sbjct: 241 GVMGDHGLQEVTYAKMDDAKPLAMKATGGWLGITDKYWAATVIPDQKAQVDSRFSSSTVA 300

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
           G   +QA +  +  +I PG SI + + LFAGAKE   +  YE+   I RF++LIDWGWFY
Sbjct: 301 GTRTFQADYLGSAQSIAPGASIASQSRLFAGAKEVAVVDGYERQYGIDRFDLLIDWGWFY 360

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           FI KP+F+++ + Y LVGNFG+AI++ TV +K +FFPLA K Y S A MK +QP++  +R
Sbjct: 361 FITKPLFLVIDWIYKLVGNFGVAILIVTVLLKGIFFPLANKSYASMAKMKALQPEMMAIR 420

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           E++     +  Q+A ++LYK   INP+AGC PIL+QIPVFFA+YKV+ +++EMR APF+G
Sbjct: 421 ERYADDKVK-QQQATMELYKKEKINPVAGCLPILIQIPVFFALYKVLFVTIEMRQAPFFG 479

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADK 514
           WI DL+A DPT +F LFG++P+          ++ +G WP+IM ++M++QMK++P P D 
Sbjct: 480 WIHDLSAPDPTTVFNLFGLIPWDPSVVPVLGPYLMLGAWPLIMGVTMWVQMKLNPAPPDP 539

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574
            QAMI N+MP++F F L+ F AGL+IYW+W+N +S++QQAVIM+ +G +I L D +  TF
Sbjct: 540 TQAMIFNYMPIIFTFMLAHFAAGLVIYWAWNNTLSVLQQAVIMRRNGVKIELWDNITRTF 599

Query: 575 SKNYNSQ 581
           SK   ++
Sbjct: 600 SKKKTAK 606


>gi|319780382|ref|YP_004139858.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317166270|gb|ADV09808.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 603

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 273/600 (45%), Positives = 376/600 (62%), Gaps = 23/600 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41
           ME N N+F+ IALSV+I+  WQ FYV PR E      +  Q                   
Sbjct: 1   MENNRNFFITIALSVLILAVWQYFYVLPRSEAQREAARVEQQRVEEQKKAAGTNPGTDTG 60

Query: 42  TVKQPNQVDNSY--AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99
           T   P  + N+    AV    R QAL+ + R ++  PSL GSINL GA+ DDL L+ Y  
Sbjct: 61  TPAAPGAIPNAPGTDAVTPAGREQALATTTRAKIDTPSLEGSINLTGARLDDLKLKHYTE 120

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159
            V  NSP ++LL+P+   N Y+AE+ +V       +P   TVW +     LTPTTP+ L 
Sbjct: 121 TVDKNSPEISLLNPAALPNGYYAEIGFVGNDKTGAVPGPETVWAVDGNATLTPTTPVTLT 180

Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
           + N   + F+RT S+D +Y+F + DTV N     +  S  GR+ R       +T+ + EG
Sbjct: 181 YSNDKGLTFKRTFSVDTNYMFTVSDTVQNAGTAAVSLSNYGRVTRFDKPLVASTYVLHEG 240

Query: 220 FIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
            I   G + L E KY+ IEK    +    ++ WLGI+DKYWA   +P+++  F  ++ Y 
Sbjct: 241 LIGFTGTEGLQEHKYASIEKDKQFTPGKSTDGWLGITDKYWAVTLVPTEKQPFQPRYAYF 300

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
            DG  RYQ+ F  + IT+  G+S T  + +FAGAKE   I+ Y +D  I RF++LIDWGW
Sbjct: 301 EDGRHRYQSDFLTDPITVDAGQSATVESEIFAGAKEVGKINAYAEDRHIKRFDLLIDWGW 360

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           F+FI KPMF L+   Y   GNFG+AI+ TTV VK +F+PLA K Y S ANMK +QPK+ E
Sbjct: 361 FHFITKPMFWLIDTLYKFFGNFGLAILATTVIVKAIFYPLANKSYASMANMKKVQPKMLE 420

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +REK+     +  Q+AM++LYKT  INPLAGCWP+ LQIPVFF++YKV+ I++EMRHAPF
Sbjct: 421 IREKYADDKMK-QQQAMMELYKTEKINPLAGCWPVALQIPVFFSLYKVLYITIEMRHAPF 479

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           +GWI+DLAA DPT++F LFG++P  LP  + +G+WP+IM ++MF+QM+M+P P D  QA 
Sbjct: 480 FGWIQDLAAPDPTSLFNLFGLIPVTLPHMLMIGVWPLIMGVTMFLQMRMNPTPPDPTQAA 539

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           I  WMPV+F F ++ FPAGL+IYW+W+N +SI+QQ +IMK  GA+I L D L + F K  
Sbjct: 540 IFTWMPVIFTFMMAGFPAGLVIYWAWNNTLSILQQGIIMKRQGAKIELWDNLVALFRKKP 599


>gi|146278901|ref|YP_001169060.1| putative inner membrane protein translocase component YidC
           [Rhodobacter sphaeroides ATCC 17025]
 gi|145557142|gb|ABP71755.1| protein translocase subunit yidC [Rhodobacter sphaeroides ATCC
           17025]
          Length = 628

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 218/606 (35%), Positives = 329/606 (54%), Gaps = 28/606 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
           ++N N  +A  LS +++  W   +  P     +                   A +     
Sbjct: 6   DQNKNLILATGLSFLVIMVWFFLFPPPEAVTQDEPATVATQETALAPSATPDAPMTAVPP 65

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
              L  +PRV +  P L GSI++ G + DDL+L+ YH  +   S IV LLSP    NAY+
Sbjct: 66  DAELPETPRVAIDTPRLQGSISMLGGRIDDLSLKSYHETLDPGSQIVRLLSPVGEPNAYY 125

Query: 122 AELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           A   +      +  ++P +NT W  + G  L    P+ L + N   ++F RTIS+D+HY+
Sbjct: 126 ALYGWTPAGALDYEDVPGANTTWTQVGGATLGVDQPVTLEWDNGQGLVFTRTISVDDHYM 185

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           F I  TV N + + +R +P G + RH        F V         D  L E  Y DI +
Sbjct: 186 FTISQTVENRTGEAVRLAPYGIVARHGKPLNLQNFFVLHEGAVGRADGELTETNYDDIAE 245

Query: 240 SSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
                           + + W+G +DKYW +  IP +   F S  KY+  G   YQA+  
Sbjct: 246 LPQVAREGALAEVVEAQQDGWIGFTDKYWMTTLIPQQGQPFSSVTKYVP-GADIYQAETR 304

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI---------PRFEMLIDWGWFYF 341
              +T+ PG +   ++ LFAGAKE+  I  Y+ + AI         P F   IDWGWF+F
Sbjct: 305 EQLVTVAPGGTAEVSSRLFAGAKEWEAIRAYQNEGAIEPTEGAEPIPGFIDSIDWGWFFF 364

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           + KP+F ++ +   ++GN G+AI+  T  +K L  PLA K YVS A MK +QP+++ LRE
Sbjct: 365 LTKPIFAVLHWLNQMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELEALRE 424

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           +       ++Q+ M++LYK   +NP AGC PIL+QIP+FF++YKVI +++E+RHAPF+GW
Sbjct: 425 R-AGEDKMLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAPFFGW 483

Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           + DL+A DP++IF  FG+ P+  P        + +GI PI++ +SM++Q K++P P DK 
Sbjct: 484 LTDLSAPDPSSIFNFFGLAPWAAPTPGSTMALIFIGILPILLGISMWLQQKLNPAPTDKA 543

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
           QAMI  WMP VF+F L  F +GL++YW  +NVI+  QQ VIM+ HG    L   +++ FS
Sbjct: 544 QAMIFAWMPWVFMFMLGHFASGLVLYWIVNNVITFSQQYVIMRSHGHHPDLFGNIKAGFS 603

Query: 576 KNYNSQ 581
           +   +Q
Sbjct: 604 RKSAAQ 609


>gi|170743186|ref|YP_001771841.1| 60 kDa inner membrane insertion protein [Methylobacterium sp. 4-46]
 gi|254773005|sp|B0UHI1|OXAA_METS4 RecName: Full=Inner membrane protein oxaA
 gi|168197460|gb|ACA19407.1| 60 kDa inner membrane insertion protein [Methylobacterium sp. 4-46]
          Length = 624

 Score =  464 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 244/621 (39%), Positives = 363/621 (58%), Gaps = 44/621 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------------------------E 32
               N  +AIALS+ ++  W  F   P++E                              
Sbjct: 3   NDKTNMIIAIALSLAVLLGWNYFVTAPQVERQRQQQAAQVNPSQGVNPSQGVDPSQGVNA 62

Query: 33  MNNERKNIQTVKQPNQVDNSY--AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFD 90
             + ++   +   P  +  +   +      R +AL+ +PRV +   +L GS+ LKG + D
Sbjct: 63  SPSPKEGGPSAPVPGTLPGAAGGSPQAALARDEALARAPRVRIDTEALRGSVALKGGRID 122

Query: 91  DLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL 150
           D+ L+GYH  V   SP + LLSP+ + N Y+AE  +V       LP S+TVW    G +L
Sbjct: 123 DVALKGYHETVDPKSPEIVLLSPAGSANPYYAEFGWVGQNAGP-LPGSDTVWT-ADGDVL 180

Query: 151 TPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210
           T   P+ L F N   ++F RT+S+D+ Y+F I D+V N   + +   P G + R      
Sbjct: 181 TAKKPLVLTFDNGAGLVFRRTLSVDDKYMFTIEDSVENKGPNPVTLYPYGLVSRWGKPHT 240

Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS---------ISNFHESNSWLGISDKYWAS 261
              + + EG I V+GDK L E  Y  + K +         +S    +  +LGI+DKYWA+
Sbjct: 241 QGYYVLHEGMIGVVGDKGLQEYTYDKMAKENPLGAPGTRGVSWPGATGGFLGITDKYWAA 300

Query: 262 VFIPSKETSFHSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320
             IP ++  +   F    +G  + YQA        + PG S+  +  LFAGAKE  T+  
Sbjct: 301 ATIPDQQAPYTGSFTERDEGATKVYQASSLGEARAVAPGASVQASQRLFAGAKEVSTVDA 360

Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
           Y + L I +F++LIDWGWFYFI KPMF  +  FY L GNFG++I++ T+ +KL F P+A 
Sbjct: 361 YREKLNIKQFDLLIDWGWFYFITKPMFKALDLFYKLFGNFGVSILVVTLILKLFFLPIAN 420

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
           + YVS A MK +QP++  +RE++     +  Q+AM++LYK   INP+AGCWP+L+QIPVF
Sbjct: 421 RSYVSMAKMKAVQPEMTAIRERYADDKVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVF 479

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
           F++YKV+ +++EMRHAPF+GWI+DLAA DPT+I  LFG+LPF  P  +H+G+WPI+M ++
Sbjct: 480 FSLYKVLFVTIEMRHAPFFGWIRDLAAPDPTSIVNLFGLLPFTPPDLLHLGVWPIVMGIT 539

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
           MF+QMKM+P P D  QA +  +MP++F F L SFPAGL+IYW+W+N++SI+QQ  IM+ +
Sbjct: 540 MFLQMKMNPAPPDPVQAQVFTFMPIIFTFMLGSFPAGLVIYWAWNNLLSILQQYWIMRRN 599

Query: 561 GAEIGLIDRLRSTFSKNYNSQ 581
           G ++ L D LRSTF +    +
Sbjct: 600 GVKVELWDNLRSTFQRRTQVK 620


>gi|39933709|ref|NP_945985.1| putative inner membrane protein translocase component YidC
           [Rhodopseudomonas palustris CGA009]
 gi|39647556|emb|CAE26076.1| 60 kDa inner membrane protein [Rhodopseudomonas palustris CGA009]
          Length = 622

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 245/621 (39%), Positives = 355/621 (57%), Gaps = 43/621 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-------- 52
           M  N N  +A+ LS +++  WQ F+  P++E+    ++  Q   +      +        
Sbjct: 1   MSDNRNTILAVVLSGLVLLGWQYFFNIPQMEKQRAAQQAQQQAAKQQAETQTPGAASPAA 60

Query: 53  -----------------YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95
                             AA     R  AL+  PR++++ P L GSI LKGA+ DDL L 
Sbjct: 61  APAAPGAPGSAPASPQQPAAAPTVSREAALAAGPRIKVETPRLSGSIALKGARIDDLALM 120

Query: 96  GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTT 154
            Y   V   SP + L SPS +   Y+AE  +V  A  +++LP+ NT+W       LTP  
Sbjct: 121 QYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGASVKLPDHNTLWEQEGTGALTPAN 180

Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214
           P+ L + N   + F R I++D+ YLF + D VTN     +   P   I RH        +
Sbjct: 181 PVTLKWDNGEGLTFRRQITVDDRYLFTVKDDVTNTGGAPVTLYPFALISRHGTPHVEGYY 240

Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274
            + EG I  LGD+ L E  YS I+++    F  +N WLGI+DKYWAS  +P       ++
Sbjct: 241 ILHEGLIGYLGDQGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDTSAQLQAR 300

Query: 275 FKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYEKD 324
           F          YQ  +  +  T+  G ++T    LFAGAKE            +  Y++ 
Sbjct: 301 FSANKVGNVTTYQTDYLEDARTVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYDRQ 360

Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384
           L +  F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV VKLLF PLA K Y 
Sbjct: 361 LGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLLFLPLANKSYA 420

Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
           S A MK IQP++  L+E+      +  Q+ M+++Y+   INP+AGC PILLQIPVFF++Y
Sbjct: 421 SMAKMKAIQPQLAALKERHPDDKVK-QQQEMMEIYRKEKINPVAGCLPILLQIPVFFSLY 479

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMS 498
           KV+ +++EMRHAPF+GWI DL+A DPTNIF LFG++P+          ++ +G WP++M 
Sbjct: 480 KVLFVTIEMRHAPFFGWIHDLSAPDPTNIFNLFGLIPYDPTAIPVLGHYLVLGAWPLVMG 539

Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            +M+ QMK++P P D  Q MI  WMPV+F F L+ FPAGL+IYW+W+N +S+ QQA IM+
Sbjct: 540 FTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVAQQAFIMQ 599

Query: 559 MHGAEIGLIDRLRSTFSKNYN 579
            +G ++ L D LR++F+K   
Sbjct: 600 RNGVKVELWDNLRTSFAKKKK 620


>gi|192289066|ref|YP_001989671.1| inner membrane protein translocase component YidC [Rhodopseudomonas
           palustris TIE-1]
 gi|192282815|gb|ACE99195.1| 60 kDa inner membrane insertion protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 622

 Score =  463 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 245/621 (39%), Positives = 355/621 (57%), Gaps = 43/621 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-------- 52
           M  N N  +A+ LS +++  WQ F+  P++E+    ++  Q   +      +        
Sbjct: 1   MSDNRNTILAVVLSGLVLLGWQYFFNIPQMEKQRAAQQAQQQAAKQQAETQTPGAASPAA 60

Query: 53  -----------------YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95
                             AA     R  AL+  PR++++ P L GSI LKGA+ DDL L 
Sbjct: 61  APAAPGAPGSAPASPQQQAAAPTVSREAALAAGPRIKVETPRLSGSIALKGARIDDLALM 120

Query: 96  GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTT 154
            Y   V   SP + L SPS +   Y+AE  +V  A  +++LP+ NT+W       LTP  
Sbjct: 121 QYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGASVKLPDHNTLWEQEGTGALTPAN 180

Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214
           P+ L + N   + F R I++D+ YLF + D VTN     +   P   I RH        +
Sbjct: 181 PVTLKWDNGEGLTFRRQITVDDRYLFTVKDDVTNTGGAPVTLYPFALISRHGTPHVEGYY 240

Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274
            + EG I  LGD+ L E  YS I+++    F  +N WLGI+DKYWAS  +P       ++
Sbjct: 241 ILHEGLIGYLGDQGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDTSAQLQAR 300

Query: 275 FKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYEKD 324
           F          YQ  +  +  T+  G ++T    LFAGAKE            +  Y++ 
Sbjct: 301 FSANKVGNVTTYQTDYLEDARTVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYDRQ 360

Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384
           L +  F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV VKLLF PLA K Y 
Sbjct: 361 LGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLLFLPLANKSYA 420

Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
           S A MK IQP++  L+E+      +  Q+ M+++Y+   INP+AGC PILLQIPVFF++Y
Sbjct: 421 SMAKMKAIQPQLAALKERHPDDKVK-QQQEMMEIYRKEKINPVAGCLPILLQIPVFFSLY 479

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMS 498
           KV+ +++EMRHAPF+GWI DL+A DPTNIF LFG++P+          ++ +G WP++M 
Sbjct: 480 KVLFVTIEMRHAPFFGWIHDLSAPDPTNIFNLFGLIPYDPTAIPVLGHYLVLGAWPLVMG 539

Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            +M+ QMK++P P D  Q MI  WMPV+F F L+ FPAGL+IYW+W+N +S+ QQA IM+
Sbjct: 540 FTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVAQQAFIMQ 599

Query: 559 MHGAEIGLIDRLRSTFSKNYN 579
            +G ++ L D LR++F+K   
Sbjct: 600 RNGVKVELWDNLRTSFAKKKK 620


>gi|260461161|ref|ZP_05809410.1| 60 kDa inner membrane insertion protein [Mesorhizobium
           opportunistum WSM2075]
 gi|259033195|gb|EEW34457.1| 60 kDa inner membrane insertion protein [Mesorhizobium
           opportunistum WSM2075]
          Length = 603

 Score =  463 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 270/600 (45%), Positives = 372/600 (62%), Gaps = 23/600 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA------ 54
           ME N N+F+ IALSV+I+  WQ FY+ PR+E+     K  Q   +  +            
Sbjct: 1   MENNRNFFITIALSVLILTLWQVFYMNPRVEQQREAAKIEQQRVEEQKKAAEATNPGAAT 60

Query: 55  ---------------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99
                          AV    R QAL+ S RV++  PSL GSINL GA+ DDL L+ Y  
Sbjct: 61  PAPAPGTIPNAPGGDAVTAAGRDQALAASKRVKIDTPSLEGSINLTGARLDDLKLKHYTE 120

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159
            V  NSP + LL+P      YFAE+ +V       +P S+TVW++     L+P+TP+ L 
Sbjct: 121 TVDKNSPEIELLNPQALPTGYFAEIGFVGNDKTGAVPGSDTVWSVEGNPTLSPSTPVTLT 180

Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
           + N   + F+R  S+D +Y+F + DTV N+    +     GR+ R+      +T+ + EG
Sbjct: 181 YTNDKGLTFKRVFSVDANYMFTVTDTVQNSGASAVSLFNYGRVTRYDKPAVASTYVLHEG 240

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
            I V G + L E KY+ IE          ++ WLGI+DKYWA   +P+++  F  ++ + 
Sbjct: 241 LIGVTGTEGLAEYKYAKIESEKQVTPGKSTDGWLGITDKYWAVTLVPTEKQPFQPRYAFF 300

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
            DG  RYQ+ F  + I +  G+S T    +FAGAKE   I+ YE D  I +F ++IDWGW
Sbjct: 301 EDGRHRYQSDFLTDAINVDAGQSATVETEIFAGAKEVAKINAYEADRHIRQFNLVIDWGW 360

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           FYFI KPMF L+   Y   GNFG+AI+ TTV VK LFFPLA K Y S ANMK +QPK+ E
Sbjct: 361 FYFITKPMFWLIDTLYKFFGNFGLAILATTVIVKALFFPLANKSYASMANMKKVQPKMLE 420

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +REK+     +  Q+AM++LYKT  INPLAGCWP+ LQIPVFF++YKV+ I++EMRHAPF
Sbjct: 421 IREKYADDKMK-QQQAMMELYKTEKINPLAGCWPVALQIPVFFSLYKVLYITIEMRHAPF 479

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           +GWI+DLAA DPT+IF LFG++P  LP  + +G+WP+IM ++MF+QM+M+P P D  QA 
Sbjct: 480 FGWIQDLAAPDPTSIFNLFGLVPVTLPHMLMIGVWPLIMGVTMFLQMRMNPTPPDPTQAA 539

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           I  WMPV+F F ++ FPAGL+IYW+W+N +SI+QQ +IMK  GA+I L D L + F K  
Sbjct: 540 IFTWMPVIFTFMMAGFPAGLVIYWAWNNTLSILQQGLIMKRQGAKIELWDNLVALFRKKP 599


>gi|218530582|ref|YP_002421398.1| YidC translocase/secretase [Methylobacterium chloromethanicum CM4]
 gi|254773000|sp|B7L2I5|OXAA_METC4 RecName: Full=Inner membrane protein oxaA
 gi|218522885|gb|ACK83470.1| YidC translocase/secretase [Methylobacterium chloromethanicum CM4]
          Length = 616

 Score =  463 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 247/613 (40%), Positives = 366/613 (59%), Gaps = 38/613 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIE----------------------EMNNERKN 39
               N FVAIALS++++  W  F   P  E                         + R+ 
Sbjct: 3   NDKTNMFVAIALSLVVLLGWHYFVTGPASERQRQAAQSQAAQTGAPQTADGIPSPSPREG 62

Query: 40  IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99
                 P  +  + A   +  R  AL+ S RV +  P+L GSI LKGA+ DD++L+ YH 
Sbjct: 63  SPNAPAPGTLPGAAAQGPV-SREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHE 121

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159
            VS  SP + LLSP+ + N Y+AE  +V       LPN++T+W    G +L P  P+ L 
Sbjct: 122 TVSDESPRIVLLSPTGSANPYYAEFGWVGANAGP-LPNADTLWK-ADGDLLAPGRPLTLT 179

Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
           + N   ++F+R +++D+ ++F + D V N S + +   P   + R         + + EG
Sbjct: 180 WDNGQGLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQTQGYYVLHEG 239

Query: 220 FIAVLGDKSLVEQKYSDIEKSS---------ISNFHESNSWLGISDKYWASVFIPSKETS 270
            I VLG   L E  Y  + K            +  + +  W+GI+DKYWA+  IP ++  
Sbjct: 240 LIGVLGGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKP 299

Query: 271 FHSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329
           F   F   +DG  + YQ     + +T+ P  S  TT  LFAGAKE   I+ YE++  I +
Sbjct: 300 FTGAFTERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNRINAYEREFGIKQ 359

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F+++IDWGWF+F+ KPMF  + +F++L+GNFG++I+L T+ +KL F P+A + YVS A M
Sbjct: 360 FDLMIDWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKM 419

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           K +QP++  +RE++K    +  Q+AM++LYK   INP+AGCWP+L+QIPVFFA+YKV+ I
Sbjct: 420 KAVQPEMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFI 478

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV--GIWPIIMSLSMFIQMKM 507
           ++EMRHAPF+GWI+DLAA DPT+I  LFG+LPF  P ++ +  G+WPIIM ++MFIQMKM
Sbjct: 479 TIEMRHAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKM 538

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
           +P P D  QA +  +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L 
Sbjct: 539 NPAPPDPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELW 598

Query: 568 DRLRSTFSKNYNS 580
           D LR  F +   S
Sbjct: 599 DNLRGMFKRGNKS 611


>gi|312113264|ref|YP_004010860.1| membrane protein insertase, YidC/Oxa1 family [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311218393|gb|ADP69761.1| membrane protein insertase, YidC/Oxa1 family [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 711

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 240/609 (39%), Positives = 346/609 (56%), Gaps = 34/609 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------- 45
           M+ N N+ +AIALS+ ++  WQ  Y+ P  ++   +    Q                   
Sbjct: 1   MDNNRNFIIAIALSLSVLLGWQFLYMKPASDKARQQAIEAQQQTAGEQGTDPTVGGAAIP 60

Query: 46  --PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
              + V           R  AL+ + R+     SL GSINLKG   DD+ L+ Y   V  
Sbjct: 61  PRASSVIPVPTTPKFASREAALAATQRIAFDTSSLTGSINLKGGSVDDVTLKEYRQTVDP 120

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
           NSP VTLLSP+ +   Y+A   + S   +I +P  +TVW       L P  P+ L + N 
Sbjct: 121 NSPPVTLLSPAGSPEPYYAYTGWYSDQADISVPGPDTVWKQQGTGALAPGKPVTLTWDNG 180

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIA 222
             ++F+R I+LDEHY+F I DTV N +   +   PR  + R ++P        + EG I 
Sbjct: 181 KGLVFKRAITLDEHYMFTITDTVENKTGKPVTLRPRAEVARLYEPTNLFGYSVLHEGLIG 240

Query: 223 VLGDKSLVEQKYSDIEKS-----------SISNFHESNSWLGISDKYWASVFIPSKETSF 271
           +  D  L E  YS   K+           S     +   WLG +D+YWA+V +P +    
Sbjct: 241 LFKDAGLKELTYSSAIKNFDPAADNGKGVSKEIISDKGGWLGFTDQYWAAVLVPDQSKPL 300

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            ++          +  +FS N +T+  G S T TN LFAGAK+   I  Y  D  I RF+
Sbjct: 301 TARLFGTPQKD--FFVEFSENPVTVATGASETFTNKLFAGAKKVVLIEQYMADDKIDRFD 358

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
            L+DWGWF F+ +P++ L+++ Y  VGNFGIAI+LTTV VK+LFFPLA K Y +   +K 
Sbjct: 359 KLVDWGWFPFLTQPLYFLLNWLYLHVGNFGIAILLTTVLVKVLFFPLANKSYSAMNKLKM 418

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +QP++ +++E+FK    Q  Q AM+ LYK   +NP AGC PIL+QIPVFFA+YKV+ +S+
Sbjct: 419 LQPEMKKIQERFKDDK-QRQQHAMMTLYKKEKVNPAAGCLPILVQIPVFFALYKVLLVSI 477

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           EMRHAPF+GWI DL+A DPTNIFTLFG++P+  P FM +G  P+IM  SM++QM+++P P
Sbjct: 478 EMRHAPFYGWIHDLSAPDPTNIFTLFGLIPWTPPHFMMLGALPLIMGCSMWLQMRLNPTP 537

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
            D  Q  I  WMPV+F F L+ F AGLI+YW+W+N+++  QQA+IMK     + L++++ 
Sbjct: 538 PDPIQQKIFAWMPVLFTFMLAPFQAGLILYWTWNNILTFAQQALIMKRQDKNMNLLEQI- 596

Query: 572 STFSKNYNS 580
               K+  +
Sbjct: 597 -GLKKSNGA 604


>gi|89068160|ref|ZP_01155577.1| putative inner membrane protein translocase component YidC
           [Oceanicola granulosus HTCC2516]
 gi|89046399|gb|EAR52456.1| putative inner membrane protein translocase component YidC
           [Oceanicola granulosus HTCC2516]
          Length = 597

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 211/596 (35%), Positives = 339/596 (56%), Gaps = 29/596 (4%)

Query: 1   MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ----------V 49
           M+  N N  +A ALS I++  W   +  P         +     +              +
Sbjct: 1   MDDQNKNLILATALSFIVILIWFVLFPPPEQAPGLTNAEGEVVAQDDTALRDEMSPDGAI 60

Query: 50  DNSYAAVLIDDRAQ-ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
           D + A   +    Q A   + RV ++ P L+GSIN  G + DDL L  YH  +  +SP+V
Sbjct: 61  DGTAAGTPVATLEQDAPVEAARVAIETPRLVGSINTAGGRIDDLKLTAYHETLDPDSPLV 120

Query: 109 TLLSPSNTKNAYFAELDYV--STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
            LLSP   +  Y+A   ++  S A+  E+P  +TVW +  G+ LTP +P+ L ++N   +
Sbjct: 121 RLLSPGGEEAQYYALHGWIALSGASADEVPGDSTVWEIEEGETLTPDSPVVLRWENGAGL 180

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
           +F +TI++D++YLF +  +V N + D +   P G++ RH    +   F + EG + +   
Sbjct: 181 VFRKTIAVDDNYLFTVTQSVENTTGDAVELRPYGQVRRHGLPDSRQFFILHEGVVRMADG 240

Query: 227 KSLVEQKYSDIEK---SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
             L E  Y D+              + W+G +DKYW +  +P+  T F S  + ++    
Sbjct: 241 -ELEEIDYDDLPDLTAEESRIEVAEDGWVGFTDKYWMTTLVPASGTPFRSVAREVNG--- 296

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            Y  +     + +  G++++  + +FAGAKE+ TI  Y +   I RF   IDWGWF+F+ 
Sbjct: 297 IYLTESIYPPVAVAAGETVSAESHVFAGAKEWETIRAY-EAAGIDRFVDSIDWGWFFFLT 355

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP+F L+ +   ++GN G +I++ T+ +K + FPLA K Y S A MK +QP++++L+E+ 
Sbjct: 356 KPIFALLHWLNGVIGNMGWSIIVLTLIIKAVLFPLAYKSYASMAKMKELQPEMEKLKERA 415

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                Q LQK M++LYKT+ +NP +GC PILLQIP+FF++YKVI ++LE+RHAP+ GWI+
Sbjct: 416 GD-DRQALQKGMMELYKTNKVNPASGCLPILLQIPIFFSLYKVIFVTLELRHAPWIGWIR 474

Query: 464 DLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           DL+A DP++I  LFG+LP+  P          +G+ PI++ +SM++Q K++P P D  Q 
Sbjct: 475 DLSAPDPSSILNLFGLLPWDTPDPGSIFFIFSLGVLPILLGISMWLQQKLNPAPPDPTQR 534

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           MI  WMP VF+F L SF +GL+IYW  +N+I+  QQ +IM+ HG +  ++  +R  
Sbjct: 535 MIFAWMPWVFMFMLGSFASGLVIYWIANNMITFTQQYLIMRSHGYKPDILGNIRGK 590


>gi|92119160|ref|YP_578889.1| putative inner membrane protein translocase component YidC
           [Nitrobacter hamburgensis X14]
 gi|122416784|sp|Q1QH68|OXAA_NITHX RecName: Full=Inner membrane protein oxaA
 gi|91802054|gb|ABE64429.1| protein translocase subunit yidC [Nitrobacter hamburgensis X14]
          Length = 609

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 243/605 (40%), Positives = 365/605 (60%), Gaps = 25/605 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M  N N  +AI LS +I+ AWQ FY  P++E+    ++      +        +      
Sbjct: 2   MSENRNTIIAIVLSGLILIAWQYFYNIPQMEKDRAAQQAQSQTAKSPTEPTPNSPKPDHP 61

Query: 61  RAQ-------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
            A+       A++ +PRV++  P L GSI+LKGA+ DDL L  +   V   SP + L SP
Sbjct: 62  AAESVVARGVAIATTPRVKIDTPRLSGSISLKGARIDDLLLTKFRETVDPASPAIELFSP 121

Query: 114 SNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
           S T   Y+AE  +V+ T +   +P+ NTVW       LT +TP+ L + N   + F RTI
Sbjct: 122 SGTTTPYYAEFGWVAATGSTARVPDQNTVWQQEGSGALTQSTPVTLKYDNGEGLTFRRTI 181

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
           ++D+HYLF I D VTN     +   P   I RH     +  + + EG I  LGD+ L E 
Sbjct: 182 AVDDHYLFTIKDEVTNAGGAPVTLYPFALISRHGTPAVSGYYILHEGLIGYLGDQKLQEY 241

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQAKFSA 291
            Y  I+++   +F  +N WLGI+DKYWA+  +P       ++F     G  + YQA +  
Sbjct: 242 SYKKIDEAKSVSFKVTNGWLGITDKYWAAALLPDTSAQLQARFSSNESGSVKTYQADYLE 301

Query: 292 NEITILPGKSITTTNFLFAGAKE---------FPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
           +  TI  G + +    LFAGAKE         F  +  Y K L +  F++LIDWGWFYFI
Sbjct: 302 DAQTIPVGGTGSVNTRLFAGAKEAGVVGINFPFVELGGYNKQLGLNHFDLLIDWGWFYFI 361

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            KPMF+ + +F+++ GNFGIAI+  TV +K +FFPLA + Y S A MK +QP+I  L+E+
Sbjct: 362 TKPMFLALDFFFHVFGNFGIAILFVTVLIKAIFFPLANRSYASMAKMKAVQPQIAALKER 421

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           F     + LQ+ M+++YK   INP++GC P++LQIPVFF++YKV+ +++EMRHAPF+ WI
Sbjct: 422 FPDDKMK-LQQEMMEIYKKEKINPISGCLPMVLQIPVFFSLYKVLFVTIEMRHAPFFAWI 480

Query: 463 KDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           KDL+A DPT+IF LFG+LP+          ++ +G WPIIM ++M+ QMK++P P D  Q
Sbjct: 481 KDLSAPDPTHIFNLFGLLPYDPSAVPLLGPYLAIGAWPIIMGITMWFQMKLNPTPPDPTQ 540

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
            +I +WMPV+F F L++FPAGL+IYW+W+N +S++QQ+ IM+ +G ++ L++ ++S F +
Sbjct: 541 KLIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVIQQSYIMRRNGVKVELLNNVKSVFRR 600

Query: 577 NYNSQ 581
             + +
Sbjct: 601 KSSDK 605


>gi|84515675|ref|ZP_01003036.1| putative inner membrane protein translocase component YidC
           [Loktanella vestfoldensis SKA53]
 gi|84510117|gb|EAQ06573.1| putative inner membrane protein translocase component YidC
           [Loktanella vestfoldensis SKA53]
          Length = 605

 Score =  461 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 205/597 (34%), Positives = 325/597 (54%), Gaps = 21/597 (3%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--PNQVDNSYAAVLID 59
           E+N N  +A  LS  ++  W   +    I      +   Q+V    P     +  A    
Sbjct: 3   EQNRNLILATLLSFAVIMTWTLLFPPEEIAVDPAAQVATQSVDPTVPLADPVTPDATSPA 62

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
              Q      R+ ++ P L GSI++ G + DDL L  Y   +  ++PIV LL P    +A
Sbjct: 63  IVEQTAPDVARIAIETPELTGSISMLGGRIDDLALTDYRETLDEDAPIVRLLRPVGELDA 122

Query: 120 YFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
           YFA   + +T       +P  +T+W++ +G+ LTP+TP+ LV+ N    +F   IS+D+ 
Sbjct: 123 YFAAFGWTATDGIDPAAVPGPDTIWSVETGETLTPSTPVTLVWDNGAGQIFRTEISVDDL 182

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           ++F    ++ N   + +   P G + RH   +    F +    +  + D  L E  YS+I
Sbjct: 183 FMFSFAQSIQNVGTETVSARPYGLVRRHGEPSDAKRFFILHEGLVRMSDGELEETSYSNI 242

Query: 238 EKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
              +              + + W+G +D +W +  IP+  T F S  KY  +    YQ +
Sbjct: 243 TDHTFDERERTLADRIDVQQSGWIGYTDHFWMTTLIPATGTPFRSTSKYF-EARDLYQVE 301

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                  +  G++ T T  LFAGAKE+  I HYE +  + RF   IDWGWF+F+ KP+F 
Sbjct: 302 AVMPPSVVPAGETATVTIRLFAGAKEWEAITHYENETGVDRFIDSIDWGWFFFLTKPIFW 361

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+     ++GN G +I+  T+ +K L  PLA K YVS A MK +QP++++L+E+      
Sbjct: 362 LLHNLNIIIGNMGWSILALTLILKALVLPLAYKSYVSMARMKELQPEMEKLKERAGD-DR 420

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q +Q+ M++LYK + +NP AGC PILLQIP+FF++YKVI +++E+RHAP+ GWI DL+A 
Sbjct: 421 QAMQQGMMKLYKENTVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPWIGWIDDLSAP 480

Query: 469 DPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
           DP+++  LFG+LP+  P        + +G+ PI++ +SM++Q K++P P D  Q MI  W
Sbjct: 481 DPSSLINLFGLLPYAAPDPGSILSLIFIGLLPILLGISMWMQQKLNPAPTDPTQQMIFAW 540

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           MP VF+F L  F +GL++YW  +N I+ VQQ  IM+ HGA+  +   ++S   +   
Sbjct: 541 MPWVFMFMLGGFASGLVLYWIANNCITFVQQYAIMRSHGAKPDVFGNIKSGLKRKKP 597


>gi|332559538|ref|ZP_08413860.1| membrane protein insertase [Rhodobacter sphaeroides WS8N]
 gi|332277250|gb|EGJ22565.1| membrane protein insertase [Rhodobacter sphaeroides WS8N]
          Length = 623

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 215/606 (35%), Positives = 331/606 (54%), Gaps = 29/606 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
           ++N N  +A  LS +++  W   +  P            Q                +   
Sbjct: 3   DQNKNLILATGLSFLVIMVWFFLFPPPEAVTEGEPTVATQQTAVAPSATPDAPTTAVPPD 62

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
           A+ L  + RV +  P L GSI++ G + DDL+L+ YH  +   S IV LLSP    NAY+
Sbjct: 63  AE-LPETQRVVIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPNAYY 121

Query: 122 AELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           A   +         ++P +NT W  +    L    P+ L + N   ++F RTIS+D+HY+
Sbjct: 122 ALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDDHYM 181

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           F +  TV NNS   ++ +P G + RH        F V    +    D  L E KY  + +
Sbjct: 182 FSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVGRADGKLTETKYDKVAE 241

Query: 240 SSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
                           + + W+G +DKYW +  IP +   F S  KY+  G   YQA+  
Sbjct: 242 LPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYVP-GADIYQAETR 300

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWGWFYF 341
              +T+ PG +   ++ LFAGAKE+ TI  Y+ + A         IP F   IDWGWF+F
Sbjct: 301 EQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWGWFFF 360

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           + KP+F ++ +  +++GN G+AI+  T  +K L  PLA K YVS A MK +QP+++ LRE
Sbjct: 361 LTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELEALRE 420

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           +       ++Q+ M++LYK   +NP AGC PIL+QIP+FF++YKVI +++E+RHAPF+GW
Sbjct: 421 RAGDDK-MLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAPFFGW 479

Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           +KDL+A DP++IF  FG+ P+  P        + +G  PI++ +SM++Q K++P P DK 
Sbjct: 480 LKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAPGDKA 539

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
           QAMI  WMP VF+F L  F +GL++YW  +N+I+  QQ VIM+ HG    +   ++++FS
Sbjct: 540 QAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIKASFS 599

Query: 576 KNYNSQ 581
           +   +Q
Sbjct: 600 RKPAAQ 605


>gi|126463485|ref|YP_001044599.1| putative inner membrane protein translocase component YidC
           [Rhodobacter sphaeroides ATCC 17029]
 gi|166977405|sp|A3PNB1|OXAA_RHOS1 RecName: Full=Inner membrane protein oxaA
 gi|126105149|gb|ABN77827.1| protein translocase subunit yidC [Rhodobacter sphaeroides ATCC
           17029]
          Length = 623

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 215/606 (35%), Positives = 331/606 (54%), Gaps = 29/606 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
           ++N N  +A  LS +++  W   +  P            Q                +   
Sbjct: 3   DQNKNLILATGLSFLVIMVWFFLFPPPEAVTEGETTVATQQTAVAPSATPDAPTTAVPPD 62

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
           A+ L  + RV +  P L GSI++ G + DDL+L+ YH  +   S IV LLSP    NAY+
Sbjct: 63  AE-LPETQRVVIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPNAYY 121

Query: 122 AELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           A   +         ++P +NT W  +    L    P+ L + N   ++F RTIS+D+HY+
Sbjct: 122 ALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDDHYM 181

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           F +  TV NNS   ++ +P G + RH        F V    +    D  L E KY  + +
Sbjct: 182 FSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVGRADGKLTETKYDKVAE 241

Query: 240 SSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
                           + + W+G +DKYW +  IP +   F S  KY+  G   YQA+  
Sbjct: 242 LPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYVP-GADIYQAETR 300

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWGWFYF 341
              +T+ PG +   ++ LFAGAKE+ TI  Y+ + A         IP F   IDWGWF+F
Sbjct: 301 EQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWGWFFF 360

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           + KP+F ++ +  +++GN G+AI+  T  +K L  PLA K YVS A MK +QP+++ LRE
Sbjct: 361 LTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELEALRE 420

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           +       ++Q+ M++LYK   +NP AGC PIL+QIP+FF++YKVI +++E+RHAPF+GW
Sbjct: 421 RAGDDK-MLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAPFFGW 479

Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           +KDL+A DP++IF  FG+ P+  P        + +G  PI++ +SM++Q K++P P DK 
Sbjct: 480 LKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAPGDKA 539

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
           QAMI  WMP VF+F L  F +GL++YW  +N+I+  QQ VIM+ HG    +   ++++FS
Sbjct: 540 QAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIKASFS 599

Query: 576 KNYNSQ 581
           +   +Q
Sbjct: 600 RKPAAQ 605


>gi|221640557|ref|YP_002526819.1| putative inner membrane protein translocase component YidC
           [Rhodobacter sphaeroides KD131]
 gi|254773018|sp|B9KNZ6|OXAA_RHOSK RecName: Full=Inner membrane protein oxaA
 gi|221161338|gb|ACM02318.1| Inner membrane protein oxaA [Rhodobacter sphaeroides KD131]
          Length = 623

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 215/606 (35%), Positives = 330/606 (54%), Gaps = 29/606 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
           ++N N  +A  LS +++  W   +  P            Q                +   
Sbjct: 3   DQNKNLILATGLSFLVIMVWFFLFPPPEAVTEGEPTVATQQTAVAPSATPDAPTTAVPPD 62

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
           A  L  + RV +  P L GSI++ G + DDL+L+ YH  +   S IV LLSP    NAY+
Sbjct: 63  AD-LPETRRVAIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPNAYY 121

Query: 122 AELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           A   +         ++P +NT W  +    L    P+ L + N   ++F RTIS+D+HY+
Sbjct: 122 ALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDDHYM 181

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           F +  TV NNS   ++ +P G + RH        F V    +    D  L E KY  + +
Sbjct: 182 FSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVGRADGKLTETKYDKVAE 241

Query: 240 SSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
                           + + W+G +DKYW +  IP +   F S  KY+  G   YQA+  
Sbjct: 242 LPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYVP-GADIYQAETR 300

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWGWFYF 341
              +T+ PG +   ++ LFAGAKE+ TI  Y+ + A         IP F   IDWGWF+F
Sbjct: 301 EQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWGWFFF 360

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           + KP+F ++ +  +++GN G+AI+  T  +K L  PLA K YVS A MK +QP+++ LRE
Sbjct: 361 LTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELEALRE 420

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           +       ++Q+ M++LYK   +NP AGC PIL+QIP+FF++YKVI +++E+RHAPF+GW
Sbjct: 421 RAGDDK-MLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAPFFGW 479

Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           +KDL+A DP++IF  FG+ P+  P        + +G  PI++ +SM++Q K++P P DK 
Sbjct: 480 LKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAPGDKA 539

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
           QAMI  WMP VF+F L  F +GL++YW  +N+I+  QQ VIM+ HG    +   ++++FS
Sbjct: 540 QAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIKASFS 599

Query: 576 KNYNSQ 581
           +   +Q
Sbjct: 600 RKPAAQ 605


>gi|77464645|ref|YP_354149.1| putative inner membrane protein translocase component YidC
           [Rhodobacter sphaeroides 2.4.1]
 gi|123590899|sp|Q3IYY6|OXAA_RHOS4 RecName: Full=Inner membrane protein oxaA
 gi|77389063|gb|ABA80248.1| protein translocase subunit yidC [Rhodobacter sphaeroides 2.4.1]
          Length = 623

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 215/606 (35%), Positives = 330/606 (54%), Gaps = 29/606 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
           ++N N  +A  LS +++  W   +  P            Q                +   
Sbjct: 3   DQNKNLILATGLSFLVIMVWFFLFPPPEAVTEGEPTVATQQTAVAPSATPDAPTTAVPPD 62

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
           A  L  + RV +  P L GSI++ G + DDL+L+ YH  +   S IV LLSP    NAY+
Sbjct: 63  AD-LPETQRVVIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPNAYY 121

Query: 122 AELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           A   +         ++P +NT W  +    L    P+ L + N   ++F RTIS+D+HY+
Sbjct: 122 ALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDDHYM 181

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           F +  TV NNS   ++ +P G + RH        F V    +    D  L E KY  + +
Sbjct: 182 FSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVGRADGKLTETKYDKVAE 241

Query: 240 SSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
                           + + W+G +DKYW +  IP +   F S  KY+  G   YQA+  
Sbjct: 242 LPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYVP-GADIYQAETR 300

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWGWFYF 341
              +T+ PG +   ++ LFAGAKE+ TI  Y+ + A         IP F   IDWGWF+F
Sbjct: 301 EQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWGWFFF 360

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           + KP+F ++ +  +++GN G+AI+  T  +K L  PLA K YVS A MK +QP+++ LRE
Sbjct: 361 LTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELEALRE 420

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           +       ++Q+ M++LYK   +NP AGC PIL+QIP+FF++YKVI +++E+RHAPF+GW
Sbjct: 421 RAGDDK-MLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAPFFGW 479

Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           +KDL+A DP++IF  FG+ P+  P        + +G  PI++ +SM++Q K++P P DK 
Sbjct: 480 LKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAPGDKA 539

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
           QAMI  WMP VF+F L  F +GL++YW  +N+I+  QQ VIM+ HG    +   ++++FS
Sbjct: 540 QAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIKASFS 599

Query: 576 KNYNSQ 581
           +   +Q
Sbjct: 600 RKPAAQ 605


>gi|84499797|ref|ZP_00998085.1| putative inner membrane protein translocase component YidC
           [Oceanicola batsensis HTCC2597]
 gi|84392941|gb|EAQ05152.1| putative inner membrane protein translocase component YidC
           [Oceanicola batsensis HTCC2597]
          Length = 608

 Score =  460 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 203/608 (33%), Positives = 332/608 (54%), Gaps = 32/608 (5%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN---------- 51
           ++N N  +A  LS I++  W   +  P   +  N     +T +                 
Sbjct: 3   DQNKNLILATVLSFIVIVVWFLLFPPPERVDDPNAPATGETAQSQADGTAPMTPGADTRE 62

Query: 52  -SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
            +         +     +PR+ +  P L GSINL+G + DDL L+ Y   + +++  VT+
Sbjct: 63  GASVPSDAAPASADTEEAPRLGIDTPRLAGSINLRGGRIDDLKLKDYLTSLDADATRVTV 122

Query: 111 LSPSNTKNAYFAELDYV--STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
           L P + ++ ++A   ++  S A+   +P  +TVW++     LTP TP+ + ++N   ++F
Sbjct: 123 LRPEDQRDPFYALYGWIPVSGADAGAMPAEDTVWSVEGTPTLTPETPVTMTWENDAGLIF 182

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
            RT+ +D  Y+F +  TV N   + +   P   + RH   +    F V    +  + D  
Sbjct: 183 RRTVGIDTDYMFTVRQTVENTGENPVALRPYSVLRRHGIPSDLKKFFVLHEGLIRMSDGE 242

Query: 229 LVEQKYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
           L E+ Y ++E   +             + + W G +D YW S  IP   T+F S  KY  
Sbjct: 243 LQEESYGNLEDFDVDGREGVPAERIEVQESGWTGFTDHYWMSTIIPD--TAFRSTAKYFP 300

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
            G + +Q       + I PG S +    LFAGAKE+ TI  Y+ D  + RF   IDWGWF
Sbjct: 301 -GRSIFQTDAVLPAVEIAPGASASVDTRLFAGAKEWETIKEYQNDHGVTRFLDAIDWGWF 359

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +F+ KP+F ++ +  + +GN G +I+  TV +K++ FPLA K Y S A M+ +QP+++++
Sbjct: 360 FFLTKPIFAVLHWLNSHIGNMGWSIIALTVLLKMVLFPLAYKSYASMAKMRELQPEMEKI 419

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +E+      Q LQK M++LYK   +NP +GC PILLQIP+FF++YKVI ++LE+RHAP+ 
Sbjct: 420 KERAGD-DRQKLQKEMMELYKKEKVNPASGCLPILLQIPIFFSLYKVIFVTLELRHAPWI 478

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           GWI DL+A DP++I  LFG+LP   P        + +G+ PI++ +SM++Q K++P P D
Sbjct: 479 GWIHDLSAPDPSSILNLFGLLPIATPDPDSFLAIISLGVLPILLGVSMWLQQKLNPAPTD 538

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
             Q MI  WMP VF+F L +F +GL++YW  +NVI+ +QQ  IM+ HG +  +   +R +
Sbjct: 539 PTQQMIFAWMPWVFMFMLGTFASGLVLYWITNNVITFMQQYAIMRSHGFKPDVFGNIRKS 598

Query: 574 FSKNYNSQ 581
            ++   ++
Sbjct: 599 LTRKKKAE 606


>gi|299132593|ref|ZP_07025788.1| membrane protein insertase [Afipia sp. 1NLS2]
 gi|298592730|gb|EFI52930.1| membrane protein insertase [Afipia sp. 1NLS2]
          Length = 611

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 264/610 (43%), Positives = 364/610 (59%), Gaps = 32/610 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE-----------------------MNNER 37
           M  N N  +A+ LS +I+ AWQ FY  P++E+                            
Sbjct: 1   MTDNRNTIIAVVLSGLILLAWQYFYNMPQMEKQRAAQQTQMQAANPANSSAPAATTQTPA 60

Query: 38  KNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97
                    +       A  + DRA+ ++ SPRV++  PSLIGSI LKGA+ DD+    Y
Sbjct: 61  AGSAAPTPASPGAEQQQAAPVKDRAEVIASSPRVKIDTPSLIGSIALKGARIDDVAFVKY 120

Query: 98  HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPI 156
              V   SP   L SP+ TK  Y+AE  +V  A  + +LP  +TVW       LTPTTP+
Sbjct: 121 RETVDPKSPAEVLFSPTGTKAPYYAEFGFVPAAGASAKLPGLDTVWTQQGSNALTPTTPV 180

Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216
            L + N   ++F RT+S+DE Y+F I D V N+        P G I RH     +  + +
Sbjct: 181 VLTYDNGEGLVFTRTLSVDEKYVFTIKDEVANSGTAPATLYPFGLISRHGLPETSGYYIL 240

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
            EG I VLGDK L E  Y  ++++  S F  SN+WLGI+DKYWA+  +P    S  ++F 
Sbjct: 241 HEGPIGVLGDKGLQEYTYKKMDETKASEFKVSNAWLGITDKYWAATLLPDPAASLTARFS 300

Query: 277 YLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
               G  R YQ  +  + +T+  G   TTT  LFAGAKE  T+  Y+K L + RFE+LID
Sbjct: 301 SKLSGTTRVYQTDYLLDPVTVQAGGHATTTTRLFAGAKEVATVDAYDKQLKLNRFELLID 360

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           WGWFYFI KPMF  + + Y L GNFG+AI+L TV VK +FFPLA K Y S A MK +QP+
Sbjct: 361 WGWFYFITKPMFWTIDHLYRLFGNFGVAILLVTVIVKAIFFPLANKSYASMAKMKAVQPQ 420

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           +  L+EK+     +  Q+ M+ +YK   INP+AGC PI +QIPVFFA+YKV+ I++EMRH
Sbjct: 421 LAALKEKYPDDKVK-QQQEMMDIYKKEKINPIAGCLPIAIQIPVFFALYKVLFITIEMRH 479

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSP 509
           APF+GWI DL+A DPT++F LFG+LP+          ++ +G WP+IM ++M+ QMK++P
Sbjct: 480 APFFGWIHDLSAPDPTHVFNLFGLLPYDPSAVPIIGHYLAIGAWPLIMGVTMWFQMKLNP 539

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            P D  Q MI +WMPV+F F L+SFPAGL+IYW+W+N +S++QQ+ IMK +G +I L D 
Sbjct: 540 APPDATQKMIFDWMPVIFTFMLASFPAGLVIYWAWNNTLSVIQQSAIMKKNGVKIELFDN 599

Query: 570 LRSTFSKNYN 579
           L+STF+    
Sbjct: 600 LKSTFAGGKK 609


>gi|27383209|ref|NP_774738.1| inner membrane protein translocase component YidC [Bradyrhizobium
           japonicum USDA 110]
 gi|38502983|sp|Q89BQ0|OXAA_BRAJA RecName: Full=Inner membrane protein oxaA
 gi|27356383|dbj|BAC53363.1| blr8098 [Bradyrhizobium japonicum USDA 110]
          Length = 616

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 245/616 (39%), Positives = 356/616 (57%), Gaps = 42/616 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE-----------MNNERKNIQTVK----- 44
           M  N N  +A+ LS +++ AWQ FY  P +E+                +   +       
Sbjct: 2   MTDNRNTILAVILSGLVLIAWQYFYNVPAMEKQRAQQQAQAELQKTTPQPTASATPGATP 61

Query: 45  ------QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98
                 QP+       A  +  R  A++ SPRV++  P + GSI+LKG + DD+ L  Y 
Sbjct: 62  QSGGAAQPSTPAAGQQAQPVVARDAAIAASPRVKIDTPRIAGSISLKGGRIDDVALVQYR 121

Query: 99  LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIK 157
             V   SP + L SPS T   Y+AE  +V       +LP++ T+W       LTPTTP  
Sbjct: 122 ETVDPKSPPIVLYSPSGTAEPYYAEFGWVPATGVTAKLPDAQTLWQQDGSGSLTPTTPAV 181

Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           L + N   + F RTIS+D+HYLF I D V+N     +   P   I RH     +  + + 
Sbjct: 182 LKWDNGEGLTFRRTISVDDHYLFTIKDEVSNVGNAPVTLYPFALISRHGTPQVSGYYILH 241

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
           EG I  L    L E  Y  I+++   NF  +N WLG++DKYWAS  +P       ++F  
Sbjct: 242 EGLIGYLD--GLQEYAYKKIDEAKSVNFKATNGWLGMTDKYWASALLPDTSAQLQARFSS 299

Query: 278 LS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH---------HYEKDLAI 327
                   YQ  +  + +T+  G S T    LFAGAKE   +           Y K+L +
Sbjct: 300 NPVGNVHTYQTDYLLDPVTVAIGGSATANARLFAGAKEAGVVGINFPLAGHGGYNKELNL 359

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
             F++LIDWGWFYFI KPMF+ + +FY   GNFGI+I+L TV VKLLFFPLA K Y S A
Sbjct: 360 NHFDLLIDWGWFYFITKPMFLGLDFFYRFFGNFGISILLVTVIVKLLFFPLANKSYASMA 419

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
            MK+IQP++  L+E++     +  Q+ M+++Y+   INP+AGC P+++QIPVFF++YKV+
Sbjct: 420 KMKSIQPQLQALKERYPDDKVK-QQQEMMEIYRKEKINPVAGCLPVVIQIPVFFSLYKVL 478

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSM 501
            +++EMR APF+GWIKDL+A DPTN+F LFG++P           ++ +GIWPIIM ++M
Sbjct: 479 FVTIEMRQAPFYGWIKDLSAPDPTNLFNLFGLIPLDPTTIPVFGHYLALGIWPIIMGITM 538

Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           + QMK++P P D  Q MI NWMP++F F L+ FPAGL+IYW+W+N +S++QQ+ IM+ +G
Sbjct: 539 WFQMKLNPTPPDPTQQMIFNWMPLIFTFMLAGFPAGLVIYWAWNNTLSVLQQSFIMRRNG 598

Query: 562 AEIGLIDRLRSTFSKN 577
            ++ L D L++TF++ 
Sbjct: 599 VKVELFDNLKATFARK 614


>gi|209886640|ref|YP_002290497.1| inner membrane protein OxaA [Oligotropha carboxidovorans OM5]
 gi|209874836|gb|ACI94632.1| inner membrane protein OxaA [Oligotropha carboxidovorans OM5]
          Length = 610

 Score =  459 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 257/610 (42%), Positives = 361/610 (59%), Gaps = 32/610 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------------------EMNNER 37
           M  N N  +A+ LS +++  WQ FY  P +                              
Sbjct: 1   MTDNRNTILAVLLSGVVLLGWQYFYNEPEMARQRAAQQAQTQAANPANSAAPNATTQTPA 60

Query: 38  KNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97
                    +          + DRA+ ++ SPR++++ P+LIGSI LKGA+FDD++L  Y
Sbjct: 61  AGSTAPTPGSPTIQQQQGAQVKDRAEVIAASPRIKIETPNLIGSIALKGARFDDVSLVKY 120

Query: 98  HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPI 156
              V   SP   L SPS TK  Y+AE  +V  A   I++P  +TVW       LT TTP+
Sbjct: 121 RETVDPKSPAEVLFSPSGTKAPYYAEFGFVPAAGATIKMPTLDTVWTQEGSNALTSTTPV 180

Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216
            L + N   + F RTIS+D+ Y+F + D V N+        P G I RH     +  + +
Sbjct: 181 VLKYDNGEGLTFTRTISVDDKYVFTVKDDVANSGTAPTTVYPFGLISRHGVPETSGYYIL 240

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
            EG I VLGD+ L E  Y ++++   S F  +N WLGI+DKYWA+  +P    +  ++F 
Sbjct: 241 HEGPIGVLGDQGLQEFSYKNMDEKKTSEFKVTNGWLGITDKYWAATLLPDPAAALTARFS 300

Query: 277 YLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
               G  R YQ  +  + + +  G S TTT  LFAGAKE  T+  Y+K L + RFE+LID
Sbjct: 301 SNLVGPTRIYQTDYLLDPVAVPAGGSATTTTRLFAGAKEVATVDAYDKQLKLNRFELLID 360

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           WGWFYFI KPMF  +   Y L GNFG+AI+L TV +K +FFPLA K Y S A MK +QP+
Sbjct: 361 WGWFYFITKPMFWAIDQLYRLFGNFGVAILLVTVAIKAVFFPLANKSYASMAKMKAVQPQ 420

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           +  L+EK+     +  Q+ M+++YK   INP+AGC PI +QIPVFFA+YKV+ I++EMRH
Sbjct: 421 LTALKEKYPDDRVK-QQQEMMEIYKKEKINPIAGCLPIAIQIPVFFALYKVLFITIEMRH 479

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSP 509
           APF+GWI+DL+A DPT+IF LFG+LPF          ++ +G WP+IM ++M+ QMK++P
Sbjct: 480 APFFGWIRDLSAPDPTHIFNLFGLLPFDPSAVPLIGTYLAIGAWPVIMGITMWFQMKLNP 539

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            P D  Q MI +WMPVVF F L+SFPAGL+IYW+W+N++S++QQ+ IMK +G +I L D 
Sbjct: 540 QPPDPTQKMIFDWMPVVFTFMLASFPAGLVIYWAWNNLLSVLQQSAIMKKNGVKIELFDN 599

Query: 570 LRSTFSKNYN 579
           L+S F+    
Sbjct: 600 LKSMFASKKA 609


>gi|254780483|ref|YP_003064896.1| putative inner membrane protein translocase component YidC
           [Candidatus Liberibacter asiaticus str. psy62]
 gi|254040160|gb|ACT56956.1| putative inner membrane protein translocase component YidC
           [Candidatus Liberibacter asiaticus str. psy62]
          Length = 581

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 581/581 (100%), Positives = 581/581 (100%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD
Sbjct: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY
Sbjct: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
           FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF
Sbjct: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
           KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS
Sbjct: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
           SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK
Sbjct: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
           SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF
Sbjct: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK
Sbjct: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
           THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL
Sbjct: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
           PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII
Sbjct: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540

Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ
Sbjct: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581


>gi|126724910|ref|ZP_01740753.1| putative inner membrane protein translocase component YidC
           [Rhodobacterales bacterium HTCC2150]
 gi|126706074|gb|EBA05164.1| putative inner membrane protein translocase component YidC
           [Rhodobacterales bacterium HTCC2150]
          Length = 620

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 216/604 (35%), Positives = 331/604 (54%), Gaps = 26/604 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN-------SYA 54
           + N N  +A+ALSV+++ AW  F+  P  E         Q+       D        S  
Sbjct: 3   DENKNLLLAMALSVMVIIAWSIFFPAPVDETPVAATSGEQSTTAGVSADAGSDVAAVSNV 62

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
               + R  ALS + R ++  P L GSI+  G + DDL+L+ Y +++   S IVTLL+P 
Sbjct: 63  PTSAEVRTAALSSATRADIDTPRLSGSISTLGGRIDDLSLKDYRIELDEASDIVTLLTPE 122

Query: 115 NTKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
            T++AY+A   +    +    ++P   T W +   + LTP TP+ LV++N   + F + I
Sbjct: 123 GTQDAYYALYGWAPGGDLGWDDVPGPETQWAIEGNEKLTPETPVTLVWENTTGMTFRQII 182

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
           S+D  +LF +   V+NN     R +P  +I RH   T    F +          +S  E 
Sbjct: 183 SVDADFLFSVQQEVSNNGSTAARLAPYSQIRRHGEPTDMKGFFILHEGAIRQSGESQKEY 242

Query: 233 KYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
            YSD+      +            SN WLG +D YW +  IP     F S  +Y      
Sbjct: 243 DYSDLADFDRDDQWGDRSDVVDVASNGWLGFTDHYWMTALIPESAQPFKSVLQY-KAQQD 301

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            Y ++     +T+  G++ T T   FAGAKE+  I  YE +  I RF   IDWGWFYF+ 
Sbjct: 302 VYLSETRLPTLTVEAGQTNTVTTHFFAGAKEWAVIREYEANNGIYRFIDSIDWGWFYFLT 361

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP+F ++     ++GN G +I+  T+ +K L FPLA K YVS A MK +QP++ E++EK 
Sbjct: 362 KPIFWVLHSLNGIIGNMGWSIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMAEIKEKA 421

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                + +QK +++LYK   +NP +GC PILLQIP+FF++YKVI +++++RHAP+ GWIK
Sbjct: 422 GDDKSK-VQKEIMELYKKEKVNPASGCLPILLQIPIFFSLYKVIFVTIDLRHAPWVGWIK 480

Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           DL+A D +++F LFGILP+  P        + +G+ P+++ +SM++Q K++P P D  QA
Sbjct: 481 DLSAPDTSSLFNLFGILPWDSPEPGSIMALIFIGVLPLLLGISMWLQQKLNPAPTDATQA 540

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           MI  WMP VF+F L SF +GL++YW  +N I+  QQ +IM+  G +  +   + S+F K 
Sbjct: 541 MIFAWMPWVFMFMLGSFASGLVVYWIANNTITFTQQYLIMRSQGFKPDVFGNIMSSFKKK 600

Query: 578 YNSQ 581
              +
Sbjct: 601 EPVK 604


>gi|86747809|ref|YP_484305.1| putative inner membrane protein translocase component YidC
           [Rhodopseudomonas palustris HaA2]
 gi|86570837|gb|ABD05394.1| protein translocase subunit yidC [Rhodopseudomonas palustris HaA2]
          Length = 629

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 239/620 (38%), Positives = 356/620 (57%), Gaps = 50/620 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM---------------NNERKNIQTVKQ 45
           M  N N  +A+ LS +++  WQ F+  P++E+                  ++    T   
Sbjct: 1   MSDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAQQAQQQQDAAKQPTQQAPAATTPG 60

Query: 46  PNQVDN-----------------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQ 88
                                        +  R  A++ SPR++++ P L G+I+LKGA+
Sbjct: 61  APNAPAASAAPGAPGAPGAPAARQSGNAPVVSREAAIAASPRIKVETPRLDGTISLKGAR 120

Query: 89  FDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST-ANNIELPNSNTVWNLISG 147
            DDL+L      V   SP + L SPS   N Y+AE  +V    +N++LP+ NT+W     
Sbjct: 121 IDDLSLTQLRETVDPKSPPIHLFSPSGGANPYYAEFGWVGAAGSNVKLPDQNTMWQQQGS 180

Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207
             LTP++PI L + N   + F R I++D+ YLF + D VTN     +   P   I RH  
Sbjct: 181 GALTPSSPITLTWDNGEGLTFRRQIAVDDRYLFTVKDDVTNVGSSPVTLYPYALISRHGT 240

Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267
                 + + EG I  LG+  L E  Y+ I+++    F  +N+W+GI+DKYWAS  +P  
Sbjct: 241 PHVEGYYILHEGLIGYLGEHGLQEYGYAKIDEAKTVGFKATNAWMGITDKYWASALLPDT 300

Query: 268 ETSFHSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPT--------- 317
                ++F     G  R YQ  +  +  T+  G ++T    LFAGAKE            
Sbjct: 301 NAQLQARFSSNQVGATRTYQTDYLEDAKTVPIGGTVTANARLFAGAKEARVVGINFPFAG 360

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           +  Y + L +  F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV +K+LF P
Sbjct: 361 LGGYNQQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLIKVLFLP 420

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437
           LA K Y S A MK IQP++  L+E+      +  Q+ M+++Y+   INP+AGC P+LLQI
Sbjct: 421 LANKSYASMAKMKAIQPQLLALKERHPDDKAK-QQQEMMEIYRKEKINPVAGCLPVLLQI 479

Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVG 491
           PVFF++YKV+ +++EMRHAPF+GWI DL+AADPTN+F LFG+LPF          ++ +G
Sbjct: 480 PVFFSLYKVLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLLPFDPTAIPVLGHYLVLG 539

Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           +WP++M  +M+ QMK++P P D  Q MI  WMPV+F F L+ FPAGL+IYW+W+N++S++
Sbjct: 540 VWPLVMGFTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNLLSVI 599

Query: 552 QQAVIMKMHGAEIGLIDRLR 571
           QQA IM+ +G ++ L D LR
Sbjct: 600 QQAYIMRRNGVKVELFDNLR 619


>gi|222147367|ref|YP_002548324.1| putative inner membrane protein translocase component YidC
           [Agrobacterium vitis S4]
 gi|254772742|sp|B9JZK8|OXAA_AGRVS RecName: Full=Inner membrane protein oxaA
 gi|221734357|gb|ACM35320.1| inner membrane insertion protein [Agrobacterium vitis S4]
          Length = 620

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 290/618 (46%), Positives = 392/618 (63%), Gaps = 39/618 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE-------------MNNERKNIQTVKQPN 47
           ME N NY +AIALSV++V  WQ FY+ PRIE                   +         
Sbjct: 2   MENNRNYLIAIALSVMVVLGWQFFYMNPRIEAQRQAEQAQQAQQAKTPATQATPGAAVNG 61

Query: 48  QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
            +     A     R  A++ S RVE+   +L GSINL GA+ DDL L+GYH  V   SPI
Sbjct: 62  ALPGQTQASATTSREDAVAKSARVEINTEALSGSINLTGARLDDLRLKGYHETVDKTSPI 121

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167
           +TLL+P++TK+ YFAE+ ++    +  +P  +TVW +  G+ LT TTP+ L + N   + 
Sbjct: 122 ITLLNPADTKDGYFAEIGFIGGEKSGSVPGPSTVWTVKDGQTLTETTPVTLTYTNETGLT 181

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227
           F R IS+D+HY+F I DTV N     I  +P GR+ R+      +T+ + EGFI V+G  
Sbjct: 182 FSRKISVDKHYMFTIEDTVANAGGADISLAPYGRVTRYNKPAVASTYVLHEGFIGVMGSG 241

Query: 228 SLV----EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
                  E KY+ IEK + +N   +  WLGI+DKYWA+  +P +  ++ S+F + +DG A
Sbjct: 242 DGKFASVEAKYAAIEKENETNAKATGGWLGITDKYWAATLVPPQSLAYDSRFSHFTDGQA 301

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE--------------------- 322
           R+QA +  + +TI PG+S T    LFAGAKE P +  Y                      
Sbjct: 302 RFQADYKNDPVTIAPGQSTTLKTLLFAGAKEVPVVDGYALDKSWFGQAFTNLFAGAKDTV 361

Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382
           +   IPRF++LIDWGWFYF+ KPMF LM +F+  VGNFG+AI+LTT+ VKLLFFPLA KQ
Sbjct: 362 QQYDIPRFDLLIDWGWFYFLTKPMFKLMDFFFRQVGNFGVAILLTTIAVKLLFFPLASKQ 421

Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
           Y S ANMK +QPK++EL+ K        LQ+AM++LYKT  INP+AGCWP+LLQIPVFFA
Sbjct: 422 YASMANMKRMQPKMEELKAKHGD-DRMALQQAMMELYKTEKINPVAGCWPLLLQIPVFFA 480

Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           +YKVI I++EMRHAPF+GWI DL+A DPT+   LFG+LPF  P  +H+GIWPIIM ++MF
Sbjct: 481 LYKVIYITIEMRHAPFFGWIHDLSAPDPTSFVNLFGLLPFESPAMLHLGIWPIIMGITMF 540

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           +QM+M+P P D  QAM+ NWMP+VF F L SFPAGL+IYW+W+N +S++QQ++IMK HG 
Sbjct: 541 VQMRMNPTPPDPTQAMLFNWMPLVFTFMLGSFPAGLVIYWAWNNTLSVLQQSIIMKRHGV 600

Query: 563 EIGLIDRLRSTFSKNYNS 580
           +I L D L+  F +    
Sbjct: 601 KIELFDNLKGLFQRKSAK 618


>gi|217977385|ref|YP_002361532.1| 60 kDa inner membrane insertion protein [Methylocella silvestris
           BL2]
 gi|254773006|sp|B8EPG5|OXAA_METSB RecName: Full=Inner membrane protein oxaA
 gi|217502761|gb|ACK50170.1| 60 kDa inner membrane insertion protein [Methylocella silvestris
           BL2]
          Length = 600

 Score =  457 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 242/598 (40%), Positives = 347/598 (58%), Gaps = 22/598 (3%)

Query: 1   ME-RNWNYFVAIALSVIIVYAWQNFYVYPRI-----EEMNNERKNIQTVKQPNQVDNSYA 54
           M   + N ++AI LS +++  W   +   +       +  ++     T  Q        A
Sbjct: 1   MNKDSRNLYLAIGLSCLVIVGWSYIFAPKQADRARLAQTQSQNAPAGTQPQSAATPQDAA 60

Query: 55  A-----VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
                  L   RA+AL+ SPR+++  P++ GS++LKGA+ DD++L+GY   V  NSP + 
Sbjct: 61  NFSPLDALPKTRAEALAASPRLKIDTPAIFGSLSLKGARLDDVSLKGYRETVDPNSPNIV 120

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           LLSP    +AY+AE  +V           +          LTP  P+ L + N   ++F 
Sbjct: 121 LLSPQGAPDAYYAEAGFVPAPGEAVAVPRSDTVWTADRDALTPEAPVTLTYDNGQGLVFH 180

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
           R I++D+ ++F I D+V N S   +  +    + RH      N   + EGF+ V+GD  +
Sbjct: 181 RQIAVDDRFMFTIKDSVENKSAKPVTLASYALVARHGLPKTVNYAVLHEGFVGVIGDAGV 240

Query: 230 VEQKYSDIEKSS--ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK--YLSDGHARY 285
            E  Y  IEK       F  +  WLG +DKYWA+  IP +     ++F       G   Y
Sbjct: 241 QEFHYDKIEKEDHGYKTFSGAGGWLGFTDKYWAATVIPDQAAPIEARFSANSTPSGIKTY 300

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
           +A F     TI PG +    + +FAGAKE  T+  Y+ DL I +FE+LIDWGWFYFI +P
Sbjct: 301 RADFVGPVQTIAPGATTEAMSRVFAGAKEVHTLDAYQADLGIKKFELLIDWGWFYFITRP 360

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           MF L+ + Y+L GNFG+AI+L TV VK LFFPLA K Y+S A MK + P+I  LREK+ +
Sbjct: 361 MFRLLHFLYSLTGNFGVAILLATVIVKGLFFPLANKSYLSMAKMKAVAPEIAALREKYPE 420

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              +  Q+  + LYK   INP++GC P+L+QIPVFFA+YKV+ +++EMRHAPF+GWI DL
Sbjct: 421 DKMK-QQQETMALYKREKINPVSGCLPMLIQIPVFFALYKVLFVTIEMRHAPFFGWIHDL 479

Query: 466 AAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
           +A DPTN+F LFG+LPF          F+ +G+WP++M +SMF+QMK +P PAD  Q  I
Sbjct: 480 SAPDPTNLFNLFGLLPFDPTQLPLIGHFLAIGVWPLLMGVSMFVQMKANPEPADPMQKQI 539

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
             WMPV+F F L  FP GL+IYW+W+N++S+ QQ +IMK  G ++ L D L S F K 
Sbjct: 540 FTWMPVIFTFTLGGFPVGLVIYWTWNNILSVSQQTLIMKRAGVKVELFDNLASLFRKK 597


>gi|148258511|ref|YP_001243096.1| putative inner membrane protein translocase component YidC
           [Bradyrhizobium sp. BTAi1]
 gi|146410684|gb|ABQ39190.1| protein translocase subunit yidC [Bradyrhizobium sp. BTAi1]
          Length = 621

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 256/620 (41%), Positives = 367/620 (59%), Gaps = 44/620 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK-----------NIQTVKQPNQV 49
           M  N N  +A+ LS +++  WQ FY  P++E+   + +            +Q    P+  
Sbjct: 1   MTDNRNTILAVILSGLVLILWQVFYNGPQMEKQRAQAQMQAELAKKQAPAVQPEATPSAT 60

Query: 50  DNSYAAVL---------------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94
               AA                 +  R  A++ +PRV++  P L GSI+LKGA+ DDL  
Sbjct: 61  PQPNAAASGSPSAPGGAATTATGVVARDAAIAATPRVKIDTPRLSGSISLKGARIDDLAF 120

Query: 95  RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPT 153
             Y   V   SP + L SPSNT   Y+AE  +V      +++P+ NTVW       LTPT
Sbjct: 121 VQYRETVDPKSPAIVLFSPSNTAEPYYAEFGWVGAPGAKVQVPDQNTVWQQDGTNALTPT 180

Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213
           TP+KL   NA+ + F+RTIS+DEHYLF I D VTN     +   P G I RH     +  
Sbjct: 181 TPVKLSTTNADGLTFKRTISVDEHYLFTIKDEVTNAGSAPVTLYPFGLISRHGTPHVSGY 240

Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273
           + + EG I  LG+K L E  Y  ++    + F  +N WLGI+DKYWA+  +P  +    +
Sbjct: 241 YILHEGLIGYLGEKGLQEYTYKKMDDDKAAKFDVTNGWLGITDKYWATALLPMTDARLTA 300

Query: 274 QFKYL-SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYEK 323
            +     D   RYQ  +     T+  G + + +  LFAGAKE            +  Y +
Sbjct: 301 NYSSKLVDNQHRYQTDYVETPQTVPAGGAASVSTRLFAGAKEAGVVGINFPIGGLGGYNQ 360

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
            L +  F++LIDWGWFYF+ KPMF+ + +F+   GNFGI+I+L TV VKLLFFPLA K Y
Sbjct: 361 QLGLNHFDLLIDWGWFYFLTKPMFLALDFFFRFFGNFGISILLVTVLVKLLFFPLANKSY 420

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            S A MK IQP++  L+E++     +  Q+ M+++YK   INP+AGC P++LQIPVFF++
Sbjct: 421 ASMAKMKAIQPQLQALKERYPDDRMK-QQQEMMEIYKKEKINPVAGCLPVVLQIPVFFSL 479

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIM 497
           YKV+ +++EMRHAPF+GWIKDL+A DPTN+FTLFG++PF          ++ +GIWPIIM
Sbjct: 480 YKVLFVTIEMRHAPFYGWIKDLSAPDPTNLFTLFGLIPFDPTQLPLFGHYLALGIWPIIM 539

Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            ++M++QMK++P P D  QAMI NWMP++F F L+ FPAGL+IYW+W+N +S++QQ  IM
Sbjct: 540 GITMWVQMKLNPAPPDPTQAMIFNWMPIIFTFMLAGFPAGLVIYWAWNNTLSVLQQGFIM 599

Query: 558 KMHGAEIGLIDRLRSTFSKN 577
           + +G ++ L D +R TF K 
Sbjct: 600 RRNGVKVELFDNIRGTFKKK 619


>gi|325291817|ref|YP_004277681.1| inner membrane protein translocase component YidC [Agrobacterium
           sp. H13-3]
 gi|325059670|gb|ADY63361.1| putative inner membrane protein translocase component YidC
           [Agrobacterium sp. H13-3]
          Length = 600

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 285/596 (47%), Positives = 398/596 (66%), Gaps = 19/596 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME+N NYF+AIALSV+IV AWQ  Y+ PRIE+     +  Q  +Q  Q   +  A     
Sbjct: 2   MEKNRNYFIAIALSVVIVLAWQFLYMNPRIEQQRRAEEARQAQQQTTQQQPAPGAAPGVT 61

Query: 61  RAQA-----------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
              A                 ++ S RV +   ++ GSINL GA+FDD+ L+GYH  V  
Sbjct: 62  ADGAPPASSTQAAATATREEAIAKSQRVAIDTNAIAGSINLTGARFDDIRLKGYHETVDD 121

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
           +SPI+TL SPS+TK+ YF EL YV  A+   +P   TVW L SG  LT TTP+ L + N 
Sbjct: 122 SSPIITLFSPSDTKDGYFTELGYVGGADAGSVPGPATVWTLASGDKLTETTPVTLKYTNQ 181

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
           N ++F RT+S+D+HY+  + D V N     + F+  GR+ R+        F + EGF+ V
Sbjct: 182 NGVVFSRTVSIDQHYMITVNDKVENPGQAPVSFATYGRVTRNNKPAIPPVFVIHEGFLGV 241

Query: 224 LGDK-SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
            G   SL E+KY D+E++ ++    +  WLGI+DKYWA+  +P + T F +++ ++    
Sbjct: 242 SGKDGSLTEEKYKDVEETPVTIAKATGGWLGITDKYWAAAIVPPQMTPFETRYSHIKGNQ 301

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             YQA F ++ +T+ PG+SI   + +FAGAKE P +  YE + +IP+F++LIDWGWFYFI
Sbjct: 302 PSYQADFKSDTMTVEPGQSIELKSLVFAGAKEVPLVDRYETEYSIPKFDLLIDWGWFYFI 361

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            KPMF +M +F+   GNFG+AI+LTT+ VK LFFPLA KQY S ANMK +QPK++EL+ K
Sbjct: 362 TKPMFKMMDFFFRYFGNFGVAILLTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAK 421

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
                   +Q+AM+QLYK   INP+AGCWP+LLQIPVFFA+YKVI +++EMRHAPF+GWI
Sbjct: 422 HGD-DRMAMQQAMMQLYKEEKINPVAGCWPMLLQIPVFFALYKVIYVTIEMRHAPFFGWI 480

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DL+A DPT++F LFG+LP+ +P F+ +G+WP++M ++MF+QM+M+P P D  QAMI  W
Sbjct: 481 HDLSAPDPTSLFNLFGLLPYDVPHFLMIGVWPLVMGITMFLQMRMNPTPPDPTQAMIFTW 540

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           MP++F F L+SFPAGL+IYW+W+N +SI QQA+IMK HGA+I L D L+  F +  
Sbjct: 541 MPLIFTFMLASFPAGLVIYWAWNNTLSISQQALIMKRHGAKIELFDNLKGLFKRKP 596


>gi|91974551|ref|YP_567210.1| putative inner membrane protein translocase component YidC
           [Rhodopseudomonas palustris BisB5]
 gi|91681007|gb|ABE37309.1| protein translocase subunit yidC [Rhodopseudomonas palustris BisB5]
          Length = 621

 Score =  455 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 242/621 (38%), Positives = 362/621 (58%), Gaps = 42/621 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL--- 57
           M  N N  +A+ LS +++  WQ F+  P++E+    ++  Q  +   Q     A      
Sbjct: 1   MTDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAQQAQQQQEAAKQQTPPAATTPGAP 60

Query: 58  ---------------------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96
                                +  R  A++ SPR++++ P L G+++LKGA+ DDL+L  
Sbjct: 61  NAPAAPGAPGAPANQPAANAPVVSRDAAIAASPRIKVETPRLDGTLSLKGARIDDLSLSQ 120

Query: 97  YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST-ANNIELPNSNTVWNLISGKILTPTTP 155
           YH  V   S  + L SPS + N Y+AE  +V    +N++LP+ NT+W       LTP  P
Sbjct: 121 YHETVDPKSAPIHLFSPSGSANPYYAEFGWVGAAGSNVKLPDQNTLWEQEGSGALTPANP 180

Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
           + L + N   + F R I++D+ YLF I D VTN     +   P   I RH        + 
Sbjct: 181 VTLKWDNGEGLTFRRQIAVDDRYLFTIKDDVTNVGGGPVTLYPFALISRHGTPHVEGFYI 240

Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275
           + EG I  LG++ L E  Y+ I+++    F  +N+W+GI+DKYWAS  +P       ++F
Sbjct: 241 LHEGLIGYLGEQGLQEYGYAKIDEAKTVGFKATNAWMGITDKYWASALLPDTNAQLQARF 300

Query: 276 KYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYEKDL 325
                G  R YQ  +  +  T+  G + T T  LFAGAKE            +  Y + L
Sbjct: 301 SSNQVGATRTYQTDYLEDAKTVPIGGTATATARLFAGAKEARVVGINFPFAGLGGYNQQL 360

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
            +  F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV VKL+F PLA K Y S
Sbjct: 361 GLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLIFLPLANKSYAS 420

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
            A MK IQP++  L+E+      +  Q+ M+++Y+   INP+AGC P+LLQIPVFF++YK
Sbjct: 421 MAKMKAIQPQLLALKERHPDDKAK-QQQEMMEIYRKEKINPVAGCLPVLLQIPVFFSLYK 479

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSL 499
           V+ +++EMRHAPF+GWI DL+AADPTN+F LFG++P+          ++ +G+WP++M  
Sbjct: 480 VLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLIPYDPSTLPVIGSYLVLGVWPLVMGF 539

Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +M+ QMK++P P D  Q MI  WMPV+F F L+ FPAGL+IYW+W+N +S++QQA IM+ 
Sbjct: 540 TMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVIQQAYIMRR 599

Query: 560 HGAEIGLIDRLRSTFSKNYNS 580
           +G ++ L D L+S   K   +
Sbjct: 600 NGVKVELWDNLKSAVVKPKKT 620


>gi|260432492|ref|ZP_05786463.1| inner membrane protein OxaA [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416320|gb|EEX09579.1| inner membrane protein OxaA [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 609

 Score =  454 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 217/609 (35%), Positives = 336/609 (55%), Gaps = 33/609 (5%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA------ 55
           ++N N  +A ALS +++  W   +  P    + ++     T     Q  N+         
Sbjct: 3   DQNKNLILATALSFLVILVWFVLFPPPEPTTLQDQTAISATEGDEIQTPNAAEPSVVGDA 62

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
                 AQ +S  PRVE+  P L GS++L G + D+L L+ Y + +  ++PIV LLSP  
Sbjct: 63  ATEATEAQPVSDVPRVEIDTPRLTGSLSLSGGRVDELYLKDYKVSLEDDAPIVELLSPVG 122

Query: 116 TKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
           + +AY+A   +   A     ++P  NT+WN+ SG+ L   +P+ L + N N + F RTI+
Sbjct: 123 SDSAYYALYGWAPGAGLSGADVPGPNTLWNIESGETLGVDSPVTLKWDNGNGLTFRRTIA 182

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP------QTATNTFGVQEGFIAVLGDK 227
           +DE Y+F +  +V N +  +I  +P G + RH            N F + EG I +    
Sbjct: 183 VDEDYMFTVTQSVENATQAEIGMAPYGILARHGMGEDGDLPGLKNFFILHEGVIGMAD-G 241

Query: 228 SLVEQKYSDIEKSSISNFHE---------SNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
           +L E KY D+    I               N W+G +D YW +  IP   + F +  KY 
Sbjct: 242 TLTEVKYDDVRDFDIDPNERAQAEVYQVKENGWIGFTDHYWMTTLIPEPGSPFKAAAKY- 300

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
                 YQ +     +T+ PG++      LFAGAKE+ TI  Y+    + +F   IDWGW
Sbjct: 301 DSRRKIYQTETVLPTLTVAPGETAQVKTRLFAGAKEWETIREYQAQ-GVQKFIDSIDWGW 359

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           F+F+ KP+F L+     L+GN G +I+  T+ +K + FPLA K YVS A MK +QP+++ 
Sbjct: 360 FFFLTKPIFWLLHNINALIGNMGWSIIGLTLIIKAILFPLAFKSYVSMAKMKELQPQMEA 419

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L+E       Q +Q+ M++LYK   +NP AGC PILLQIP+FF++YKVI +++E+RHAP+
Sbjct: 420 LKEAAGD-DRQKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPW 478

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           +G  +DL+A DPT+I  LFG+LP+  P        + +GI P+++ +SM++Q K++P P 
Sbjct: 479 FGPFRDLSAPDPTSIMNLFGLLPWAGPEPGTLMATIFIGILPLLLGISMWLQQKLNPAPT 538

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  QAMI  WMP VF+F L SF +GL+IYW  +N I+  QQ +IM+  G +  +   + S
Sbjct: 539 DPTQAMIFAWMPWVFMFMLGSFASGLVIYWIANNTITFTQQYLIMRSQGYKPDVFGNIMS 598

Query: 573 TFSKNYNSQ 581
           +F +   + 
Sbjct: 599 SFKRTPKTD 607


>gi|159184283|ref|NP_353415.2| putative inner membrane protein translocase component YidC
           [Agrobacterium tumefaciens str. C58]
 gi|38503098|sp|Q8UIB3|OXAA_AGRT5 RecName: Full=Inner membrane protein oxaA
 gi|159139609|gb|AAK86200.2| preprotein translocase 60 kD membrane subunit [Agrobacterium
           tumefaciens str. C58]
          Length = 599

 Score =  454 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 281/596 (47%), Positives = 396/596 (66%), Gaps = 19/596 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME+N NYF+AIALSV+IV AWQ  Y+ PRIE+     +  Q  +Q  Q   +  A     
Sbjct: 1   MEKNRNYFIAIALSVVIVLAWQFLYMNPRIEQQRRAEEARQAQQQTTQQQPAPGAAPGAT 60

Query: 61  RAQA-----------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
              A                 ++ + RV +   ++ GSINL GA+FDD+ L+GYH  V  
Sbjct: 61  VEGAPPASSTQAAATATREEAIARTQRVAIDTNAIAGSINLTGARFDDIRLKGYHETVDD 120

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
           +SPI+TL SP++TK+ YF EL YV+      +P   TVW L SG  LT TTP+ L + N+
Sbjct: 121 SSPIITLFSPADTKDGYFTELGYVAAQEVGGVPGPTTVWTLASGDKLTETTPVTLTYTNS 180

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
             ++F RT+S+DEHY+  I D V N     I F+  GR+ R+        F + EGF+ V
Sbjct: 181 KGVVFSRTVSIDEHYMLSIADKVENPGQAAISFATYGRVTRNNKPVIPPVFVIHEGFLGV 240

Query: 224 LGDK-SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
            G   SL E+KY D+E+  ++    +  WLGI+DKYWA+  +P + T F +++ +++   
Sbjct: 241 SGKDGSLTEKKYKDVEEEPVTVAKATGGWLGITDKYWAAAIVPPQTTPFETRYSHITGNQ 300

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             YQA F ++ +T+  G+SI   + +FAGAKE P +  YE + ++P+F++LIDWGWFYFI
Sbjct: 301 PSYQADFKSDSMTVEAGQSIELKSLVFAGAKEVPLVDRYETEYSVPKFDLLIDWGWFYFI 360

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            KPMF +M +F+   GNFG+AI+LTT+ VK LFFPLA KQY S ANMK +QPK++EL+ K
Sbjct: 361 TKPMFKMMDFFFRYFGNFGVAILLTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAK 420

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
                   +Q+AM+QLYK   INP+AGCWP+LLQIPVFFA+YKVI +++EMRHAPF+GWI
Sbjct: 421 HGD-DRMAMQQAMMQLYKEEKINPVAGCWPMLLQIPVFFALYKVIYVTIEMRHAPFFGWI 479

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DL+A DPT++F LFG+LP+ +P F+ +G+WP++M ++MF+QM+M+P P D  QAMI  W
Sbjct: 480 HDLSAPDPTSLFNLFGLLPYDVPHFLMIGVWPLVMGITMFLQMRMNPTPPDPTQAMIFTW 539

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           MP++F F L+SFPAGL+IYW+W+N +SI QQA+IMK HGA+I L D ++  F +  
Sbjct: 540 MPLIFTFMLASFPAGLVIYWAWNNTLSISQQALIMKRHGAKIELFDNIKGLFKRKP 595


>gi|115522671|ref|YP_779582.1| putative inner membrane protein translocase component YidC
           [Rhodopseudomonas palustris BisA53]
 gi|115516618|gb|ABJ04602.1| protein translocase subunit yidC [Rhodopseudomonas palustris
           BisA53]
          Length = 626

 Score =  454 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 243/616 (39%), Positives = 362/616 (58%), Gaps = 47/616 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM--------NNERKNIQTVKQPNQVDNS 52
           M  N N  +A+ LS +++  WQ F+  P++E+         +     +Q   QPN    +
Sbjct: 1   MTDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAEMAARSQATSQVQPTAQPNAQPGA 60

Query: 53  YAAVL----------------------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFD 90
             A                           R  AL+ SPRV+++ P L GSI+LKGA+ D
Sbjct: 61  SGAQPGVPAPQAGTPTPNAAAPAAVTPTVSRDAALAASPRVKIETPRLSGSISLKGARLD 120

Query: 91  DLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST-ANNIELPNSNTVWNLISGKI 149
           D+ L  +   V   SP + L SPS +K+ Y+AE  +V+    N+++P+ NTVW       
Sbjct: 121 DIALVQFRETVDPKSPAIELFSPSGSKHPYYAESGWVAAVGTNVKVPDQNTVWTQEGSNS 180

Query: 150 LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209
           LTPT+P+ L + N   + F RTI++DE YLF + D V+N     +   P   I RH    
Sbjct: 181 LTPTSPVVLRYDNGEGLTFRRTIAVDERYLFTMKDEVSNIGNAPVTLYPFALISRHGAPQ 240

Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269
               + + EG +  LG++ L E  Y+ I+++   NF  +N WLGI+DKYWAS  +P    
Sbjct: 241 VAGYYILHEGLVGYLGEQGLQEYGYAKIDEAKAVNFKVTNGWLGITDKYWASALLPDTTA 300

Query: 270 SFHSQFKYL-SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH--------H 320
              ++F    ++    YQ  +  +   +  G + +    LFAGAKE   +          
Sbjct: 301 QLQARFSSNLANNVRTYQTDYLLDPQVVPIGGTGSANTRLFAGAKEAGVVGIGFPLGFGG 360

Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
           Y K L +  F++LIDWGWFYFI KPMF+ + +FY+LVGNFG++I+  TV +KLLF PLA 
Sbjct: 361 YNKQLDLNHFDLLIDWGWFYFITKPMFVALDFFYHLVGNFGLSILFVTVIIKLLFLPLAN 420

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
           K Y S A MK IQP++  L+++      +  Q+ M+++Y+   INP+AGC P+LLQIPVF
Sbjct: 421 KSYASMAKMKAIQPQLQALKDRHPDDKAK-QQQEMMEIYRKEKINPVAGCLPVLLQIPVF 479

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWP 494
           F++YKV+ +++EMRHAPF+GWI DL+AADPTNIF LFG++P+          ++ +GIWP
Sbjct: 480 FSLYKVLFVTIEMRHAPFYGWIHDLSAADPTNIFNLFGLIPYDPTQIPVLGYYLVLGIWP 539

Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           IIM ++M++QMK++P P D  Q MI  WMP++F F L+SFPAGL+IYW+W+N++S++QQ 
Sbjct: 540 IIMGITMWVQMKLNPAPPDPTQQMIFAWMPLLFTFMLASFPAGLVIYWAWNNLLSVIQQG 599

Query: 555 VIMKMHGAEIGLIDRL 570
            IM+ +G ++ L D L
Sbjct: 600 YIMRKNGVKVELFDNL 615


>gi|126737055|ref|ZP_01752790.1| putative inner membrane protein translocase component YidC
           [Roseobacter sp. SK209-2-6]
 gi|126721640|gb|EBA18343.1| putative inner membrane protein translocase component YidC
           [Roseobacter sp. SK209-2-6]
          Length = 601

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 217/601 (36%), Positives = 330/601 (54%), Gaps = 24/601 (3%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPR----IEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ++N N  +A  LS +++  W  F+  P     ++    E             D + A   
Sbjct: 3   DQNKNLILATVLSFLVILGWYTFFPPPEPEQPVDVAVTENAAESGTTLVPTADATDAVAN 62

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
                 +   +PR+ +  P + GSI L+G + DDL+L+ Y   ++  SPIV LL P    
Sbjct: 63  ATTEEASAPDAPRLAIDTPRVTGSIALQGGRIDDLSLKDYRETLADGSPIVKLLKPVGEA 122

Query: 118 NAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
            AY+A   +   A   + ++P +N++W+  +G  L+P TP+ L + N N + F RTIS+D
Sbjct: 123 QAYYALYGWAPGAGLTSSDVPGANSIWSAPAGATLSPETPVTLTWDNGNGLTFARTISVD 182

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
           E Y+F +  +VTN +   I  +P G + RH        F +    +  + D  L E  YS
Sbjct: 183 EDYMFSVTQSVTNATDGTISLAPYGTLARHGEPEDLKNFFILHEGVVGMADGELSELDYS 242

Query: 236 DIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
           D+    I              +N W+G +D YW S  IP     F S  K+  +    YQ
Sbjct: 243 DVADFDIDPRDGSRSEVKQVTTNGWIGFTDHYWMSTLIPEPGQGFRSIAKF-DERRGIYQ 301

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
                  +++  G S   T  LFAGAKE+ +I  YEK   I  F   IDWGWF+F+ KPM
Sbjct: 302 TDIVLPTVSLAAGNSTEVTTMLFAGAKEWASIRSYEKS-GIAGFLDSIDWGWFFFLTKPM 360

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F ++ +   L+GN G AI+  TV +K++ FPLA K Y S A MK +QP++++L+E+    
Sbjct: 361 FAVLHWLNLLIGNMGWAIIGLTVLIKIIVFPLAYKSYASMAKMKELQPEMEKLKERTGD- 419

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q +QK M++LYK   +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G  +DL+
Sbjct: 420 DRQKMQKEMMELYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQDLS 479

Query: 467 AADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           A DPT++  LFG+LPF  P        + +GI P+++ +SM++Q K++P P D  Q MI 
Sbjct: 480 APDPTSLMNLFGLLPFSGPEAGSILALVFIGILPLLLGISMWLQQKLNPAPTDPTQQMIF 539

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            WMP VF+F L  F +GL++YW  +N I+  QQ +IM+ HG +  +   ++S F K   S
Sbjct: 540 AWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSGFKKKPKS 599

Query: 581 Q 581
           +
Sbjct: 600 E 600


>gi|260427287|ref|ZP_05781266.1| inner membrane protein OxaA [Citreicella sp. SE45]
 gi|260421779|gb|EEX15030.1| inner membrane protein OxaA [Citreicella sp. SE45]
          Length = 607

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 202/604 (33%), Positives = 324/604 (53%), Gaps = 27/604 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-------PNQVDNSYA 54
           ++N N  +A  LS +++  W   +  P    ++ +        +                
Sbjct: 3   DQNKNLLIATGLSFVVILIWFLLFPPPEEPAVDQQEPVATAPVEGDAATTPSTATPTEGT 62

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
                      + +PR+ +    L GSI+L G + D+L L+ Y + +  +SP V +L P 
Sbjct: 63  EGTATAPQAETADAPRLPIDTARLGGSISLTGGRIDELILKDYTVTIDEDSPKVQILEPV 122

Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
            T +AY+A   +         ++P +NT W + SG  LT  +P+ L + +   + F RT+
Sbjct: 123 GTGHAYYALYGWAPGNGLEPADVPGANTEWQVESGSSLTVDSPVTLRWDSPAGLTFRRTV 182

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
           ++D++++F +  +V N     +  +P G + RH        F V    +  + D  L E 
Sbjct: 183 AVDKNFMFTVTQSVENTGEASVSAAPYGIVARHGEPVGRKKFFVLHEGVVAMADGKLNEI 242

Query: 233 KYSDIEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
            YSD+    +               N W+G +D YW +  IPS+ T+F    KY  +G  
Sbjct: 243 DYSDMPDMDMVASEGARADVTQVAENGWIGFTDHYWMTTLIPSQGTAFKQVAKY-DEGRD 301

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            YQ +     +T+ PG++   T  L+AGAKE+ TI  Y +D  + RF   IDWGWF+F+ 
Sbjct: 302 IYQTEAVLPTVTLAPGETQQVTTQLYAGAKEYETIRGY-EDAGVDRFIDSIDWGWFFFLT 360

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP+F L+ + + L+GN G +I+  T+ +K + FPLA K YVS A MK +QP++++L+E+ 
Sbjct: 361 KPIFWLLHHLHGLIGNMGWSIIALTITLKAILFPLAFKSYVSMAKMKELQPEMEKLKERA 420

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                Q LQ+ M+QLYK   +NP +GC PILLQIP+FF++YKVI ++ E+R AP++G  +
Sbjct: 421 GD-DRQKLQQEMMQLYKKEKVNPASGCLPILLQIPIFFSLYKVIFVAFELRQAPWFGPFQ 479

Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           DL+  DPT+++ LFG+LP+  P        + VGI PI++ +SMF+Q K++P PAD  Q 
Sbjct: 480 DLSTPDPTSLYNLFGLLPWAAPEPGSTLALIFVGILPILLGISMFLQQKLNPAPADPTQK 539

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           MI  WMP VF+F L  F +GL++YW  +N I+  QQ +IM+  G    +   ++S F K 
Sbjct: 540 MIFAWMPWVFMFMLGGFASGLVVYWITNNTITFTQQYLIMRSQGYTPDVFGNIKSGFKKT 599

Query: 578 YNSQ 581
               
Sbjct: 600 PKDD 603


>gi|86135820|ref|ZP_01054399.1| putative inner membrane protein translocase component YidC
           [Roseobacter sp. MED193]
 gi|85826694|gb|EAQ46890.1| putative inner membrane protein translocase component YidC
           [Roseobacter sp. MED193]
          Length = 602

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 209/602 (34%), Positives = 329/602 (54%), Gaps = 26/602 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-----PNQVDNSYAAV 56
           ++N N  +AIALS +++  W  F+  P +                    P+    + AA 
Sbjct: 3   DQNKNLILAIALSSLVLLGWMYFFPPPEVTPAPEAVATETAPADGTASSPSAAVAADAAT 62

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
                  + S +PR+ +++  + GSI+L+G + DDL L+ Y +   +   IV  LSP   
Sbjct: 63  SQPSEEASASDAPRISIESDRITGSISLQGGRIDDLALKDYRITNDAPE-IVQFLSPVGQ 121

Query: 117 KNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174
           ++AY+A   +   +     ++P +NT+W   +   LTP + + L + N   + F RTI++
Sbjct: 122 QDAYYALYGWAPGSGLGAEDVPGANTLWTAPADAELTPDSSVTLTWDNGKGLTFNRTIAV 181

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
           DE Y+F I  +VTN S   +  +P G + RH        F +    +  + D  L E  Y
Sbjct: 182 DEDYMFAITQSVTNASGGAVSLAPYGTLARHGEPADMKNFFILHEGVVGMADGELAELDY 241

Query: 235 SDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           SD+    +              S+ W+G +D YW S  IP+   +F S  KY  +    Y
Sbjct: 242 SDVADFDVDPRDGSRSEVKQVASDGWIGFTDHYWMSTLIPAPGQAFRSSVKY-DERRDIY 300

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
           Q       +T+  G++   T  LF+GAKE+ TI  YEK   I  F   IDWGWF+F+ KP
Sbjct: 301 QTDVVLPTMTLADGETSEVTTQLFSGAKEWATIRAYEKG-GIAGFLDSIDWGWFFFLTKP 359

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F ++ +   L+GN G AI+  TV +K++ FPLA K Y S A MK +QP++++L+E+   
Sbjct: 360 IFAVLHWLNALIGNMGWAIIALTVLIKIIVFPLAYKSYASMAKMKELQPEMEKLKERAGD 419

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q  QK +++LYK   +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G  +DL
Sbjct: 420 -DRQKQQKEIMELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQDL 478

Query: 466 AAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
           +A DPT+I  LFG+LPF  P        + +GI P+++ +SM++Q K++P P D  Q MI
Sbjct: 479 SAPDPTSIMNLFGLLPFAGPTPDSIMALVFIGILPLLLGISMWLQQKLNPAPTDPTQQMI 538

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
             WMP VF+F L  F +GL++YW  +N I+  QQ +IM+ HG    +   ++++  +   
Sbjct: 539 FAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYTPDVFGNIKASVKRKPK 598

Query: 580 SQ 581
           + 
Sbjct: 599 TD 600


>gi|23015970|ref|ZP_00055732.1| COG0706: Preprotein translocase subunit YidC [Magnetospirillum
           magnetotacticum MS-1]
          Length = 578

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 214/580 (36%), Positives = 328/580 (56%), Gaps = 19/580 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE----------------EMNNERKNIQTVK 44
           M    N FVAIA+SV I+  WQ F+   +                    N       +  
Sbjct: 1   MNDQRNLFVAIAISVAILIGWQYFFPTAKPPVEQAAQQQAAEVKASAPANVPSPATASSP 60

Query: 45  QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                  + AA     R +AL  S R+ ++ PS+ GSI L GA+ DD+ L  Y    +++
Sbjct: 61  AQVPGTPAAAAQTGASRNEALGKSRRIAIQTPSMHGSIALTGARIDDITLVKYRETPAAD 120

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
           S  + L+SP+ +   Y+AE  +V+T  N+++P   +VW       LT  +P+ L + N  
Sbjct: 121 SAEIDLMSPAESPEPYWAEFGWVATDANVKVPGPESVWQAQGTGPLTQASPVVLTWDNGE 180

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
            + F RT ++DE+Y+F +   V N         P   + R         + + EG + V 
Sbjct: 181 GLRFVRTYTVDENYMFGVTQRVENYGTKAASLHPYALLARTGTPHVAGMYILHEGPLGVF 240

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHA 283
              +L E KY D++K   + +  +  W GI+DKYW +  +P  +T    +F +       
Sbjct: 241 D-GTLKEMKYDDLKKEGSARYKTTGGWAGITDKYWLTALVPPAKTEITGRFVHQRLGNAD 299

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
           RYQ  + A    I  GK+      LF GAK+   +  Y +   I RF++ ID+GWFYF+ 
Sbjct: 300 RYQVDYLAPARVIEAGKTEEAGFHLFTGAKQVSLLDGYGEKFGIDRFDLAIDFGWFYFLT 359

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP F L+   ++ +GN G+AI+  TV +KL  FPLA K YV+   MK +QPK+ EL+ ++
Sbjct: 360 KPFFYLLQMLHSALGNMGLAILALTVILKLAMFPLANKSYVAMGKMKKLQPKVQELQARY 419

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                  LQ+ M+ LYK   +NP++GC PI++QIPVFFA+YKV+ +++EMRHAPF+GWI 
Sbjct: 420 ADDK-MRLQQEMMALYKAEKVNPVSGCLPIMVQIPVFFALYKVLFVTIEMRHAPFYGWIS 478

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DL+A DPTNIFTLFG++P+  P  MH+G+WP+IM ++M++Q K++P P D  QA ++ ++
Sbjct: 479 DLSAQDPTNIFTLFGLIPWTPPHIMHLGVWPLIMGITMYLQQKLNPQPTDPVQAKMMQFL 538

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           P++F F L++F +GL+IYW+WSN +SI+QQ VIMK    +
Sbjct: 539 PLIFTFLLANFASGLVIYWAWSNTLSILQQWVIMKRAEEK 578


>gi|163745583|ref|ZP_02152943.1| putative inner membrane protein translocase component YidC
           [Oceanibulbus indolifex HEL-45]
 gi|161382401|gb|EDQ06810.1| putative inner membrane protein translocase component YidC
           [Oceanibulbus indolifex HEL-45]
          Length = 623

 Score =  450 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 203/611 (33%), Positives = 326/611 (53%), Gaps = 33/611 (5%)

Query: 1   MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           M+  N N  +A ALS  ++  W   +  P  +        +   +    V  S A     
Sbjct: 1   MDEQNKNLILATALSFAVILVWFLLFPPPEADPALENSVEMSQAEDGTSVPASPADTAAA 60

Query: 60  D------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
                        R  AL+ +PRV +    + GSI+L G + DDL L  Y   +  N+ +
Sbjct: 61  PGTDNGEGAAPQGRRAALADAPRVAIATDKVSGSISLMGGRIDDLKLNDYQTTLDENAEV 120

Query: 108 VTLLSPSNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
           VTLLSP  + +AY+A   + + +      +P  +T+W L  G+ L   +P+ L + N   
Sbjct: 121 VTLLSPEGSSDAYYALHGWAAGSGLAPDAVPGVDTLWTLSEGETLGVDSPVTLSWDNGAG 180

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
            +F RTIS+D  Y+F I  +VTNN    +  +P G I +H       +F +       + 
Sbjct: 181 QIFNRTISVDNEYMFDITQSVTNNGDAPVNLAPFGMIAQHGLPEDLKSFFILHEGAVSMA 240

Query: 226 DKSLVEQKYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFK 276
           +  L E  + DI ++ +++            +  W+G +D YW +V IP    +F     
Sbjct: 241 NGELSEIDWDDIAEADVNSTWGRPAVVTEGVTEGWVGFTDHYWQAVLIPGAGEAFEQALT 300

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
           Y       Y+A       ++  G+S+++++  FAGAKE+ T+  Y+    + +F   IDW
Sbjct: 301 Y-DPRADTYRAFTRQPTRSVAAGESVSSSSKFFAGAKEWETLQDYQSA-GVAKFIDSIDW 358

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           GWF+F+ KP+F L+     L+GN G+AI+  T+ +K L FPLA K YVS A MK +QP++
Sbjct: 359 GWFFFLTKPIFWLLHNLNQLIGNMGVAIIGLTLLIKALLFPLAYKSYVSMARMKELQPEM 418

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           ++L+ K      Q +Q+ M++LYK + +NP AGC PIL+QIP+FF++YKVI +++E+RHA
Sbjct: 419 EKLK-KEAGDDRQKMQQGMMELYKKNKVNPAAGCLPILMQIPIFFSLYKVIFVTIELRHA 477

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPP 510
           PF+G  +DL++ DPT+I  L+G+LP+  P        + +GI P+++ +SMF+Q K++P 
Sbjct: 478 PFFGPFQDLSSPDPTSIMNLWGLLPYAAPEPGSMLALVFIGILPLLLGISMFLQQKLNPA 537

Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
           P D  Q MI  WMP VF+F L  F +GL++YW  +N I+  QQ +IM+  G +  L   +
Sbjct: 538 PTDPTQQMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDLWGNI 597

Query: 571 RSTFSKNYNSQ 581
              F +     
Sbjct: 598 AGGFKRTPKGD 608


>gi|110678771|ref|YP_681778.1| putative inner membrane protein translocase component YidC
           [Roseobacter denitrificans OCh 114]
 gi|123172722|sp|Q16AA1|OXAA_ROSDO RecName: Full=Inner membrane protein oxaA
 gi|109454887|gb|ABG31092.1| inner membrane protein oxaA, putative [Roseobacter denitrificans
           OCh 114]
          Length = 606

 Score =  448 bits (1152), Expect = e-123,   Method: Composition-based stats.
 Identities = 214/605 (35%), Positives = 333/605 (55%), Gaps = 28/605 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ------PNQVDNSYAA 55
           ++N N  +A ALS I++  W   +  P  E       + +          P+   ++  +
Sbjct: 3   DQNKNLILATALSFIVILVWFVLFPPPEPEMPLTGETSTELTPDAATGSLPSVTSDTAPS 62

Query: 56  VLID--DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
           V+I+   R+ AL  +PRVE+    + GSI+L G + DDL+L+ Y      ++ IVT+LSP
Sbjct: 63  VVIEGETRSAALEQAPRVEIATDRVKGSISLLGGRIDDLSLKDYRETQEEDADIVTMLSP 122

Query: 114 SNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
             +  AY+A   + + A     ++P  +T W +I G IL+   P+ L + N   + F R 
Sbjct: 123 VGSPGAYYALYGWAAGAGVDPSQVPGPDTEWQVIDGDILSVDAPVTLQWDNGAGLSFTRI 182

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
           I +D++Y+F+I  +V N S   +  +P G + RH        F +    +  + D  L E
Sbjct: 183 IEIDDNYMFQITQSVANTSDAPVTVAPYGILARHGEPDDLKNFFILHEGVVAMADGELTE 242

Query: 232 QKYSDIEKSSISNFHESN---------SWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
             + DI +  +                 W+G +D +W SV IP    S     KY     
Sbjct: 243 TNWDDIPEFPVDQREGVPAERIENVLNGWIGFTDHFWMSVLIPDPSASARLTTKYRP-RA 301

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             YQA+      T+ PG S++ T  LFAGAKE+ TI +Y+ D  + RF   IDWGWF+F+
Sbjct: 302 DIYQAETVLPAQTVAPGTSVSATTQLFAGAKEWETIRNYQTD-GVDRFIDSIDWGWFFFL 360

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            KP+F L+ Y    +GN G AI+  T+ +K +  PLA K YVS A MK +QP++++L+E+
Sbjct: 361 TKPIFFLLHYLNAFIGNMGWAIIGLTLIIKAILLPLAYKSYVSMAKMKELQPQMEKLKEE 420

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
                 Q +Q+ M++LYK   +NP AGC PILLQIP+FF++YKVI +++E+RHAPF+G  
Sbjct: 421 AGD-DRQKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPFFGPF 479

Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           +DL+A DPT+I  L+G+LPF  P        + +GI P+++ +SM++Q K++P P D  Q
Sbjct: 480 QDLSAPDPTSIMNLYGLLPFDGPEPGSIMALIFIGILPLLLGISMWLQQKLNPAPTDPTQ 539

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
            MI  WMP VF+F L  F +GL++YW  +N I+ VQQ +IM+  G +  +   ++  F K
Sbjct: 540 QMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFVQQYMIMRSQGYKPDVFGNIKGGFQK 599

Query: 577 NYNSQ 581
                
Sbjct: 600 KTKPD 604


>gi|209965568|ref|YP_002298483.1| hypothetical protein RC1_2283 [Rhodospirillum centenum SW]
 gi|209959034|gb|ACI99670.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 602

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 226/593 (38%), Positives = 323/593 (54%), Gaps = 33/593 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRI---EEMNNERKNIQTVKQPNQVDNSYAA-- 55
           M    N  +AI +SV I++ +  FY  PR    EE   ++  +Q    P  V    A   
Sbjct: 1   MTDQKNLILAIVISVAILFGFNYFYERPRQQALEEYRQQQAALQAETAPAAVPGVTAPGS 60

Query: 56  ------------------------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDD 91
                                       DR   L  S RV++  P L GS+NL+G + DD
Sbjct: 61  TVPGPAGDIPVPAPGAPAPTDAVPAAPRDRGAVLGDSQRVQVDTPRLHGSVNLRGGRIDD 120

Query: 92  LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKI 149
           L L  YH+    +SP V LLSP  T   YFAE  +V TA+     LP   T W  +S   
Sbjct: 121 LTLANYHVTPDKSSPEVVLLSPVGTSQPYFAEFGWVPTADTAGQPLPGPTTDWQPVSQGP 180

Query: 150 LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209
           LTP +P+ L + N   ++FER I++D  Y+F +   VTN S   +   P G + R    T
Sbjct: 181 LTPDSPVVLRWDNGQGLVFEREIAIDRDYMFTVTQRVTNQSGQPVTLHPYGFVQRRGTPT 240

Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269
            +  F + EG + V              + +  +    +  W G +DKYW    +P + +
Sbjct: 241 TSGFFILHEGALGVFDGTLREFDYSDLKDSTQPATQTTTGGWFGFTDKYWLVTLVPDQAS 300

Query: 270 SFHSQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328
               +  +    G   YQ  F    +T+ PG +  +T+ LFAGAK   T+  YE +L I 
Sbjct: 301 PVDVRVLHQDQGGQPLYQVDFRGQGLTVAPGATAESTHRLFAGAKIVRTLDAYESELGIA 360

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
           RF   +DWGWFYF+ KP F  +      +GNFGIAI++ TV ++L FFPLA KQY + A 
Sbjct: 361 RFSYAVDWGWFYFLTKPFFYGLDLLGQALGNFGIAILVFTVLLRLAFFPLANKQYKAFAK 420

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           MK +QPK++ELR++      Q L  A ++LYK   +NPL+GC PILLQIPVFFA+YKV+ 
Sbjct: 421 MKLLQPKMEELRKRHGD-DRQKLSMATMELYKQEKVNPLSGCLPILLQIPVFFALYKVLF 479

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
           +++EMRHAPF+GWI DL+A DPT +F LFG++P+  PGF+ VG  P++M  +M++Q K+S
Sbjct: 480 VTIEMRHAPFYGWITDLSAPDPTTVFNLFGLIPWSPPGFLMVGALPLMMGFTMWLQQKIS 539

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           P   D  Q  I   +P +F + +++FPAGL+IYW+WSN+++I QQ  IM+  G
Sbjct: 540 PANPDPIQQRIFMVLPFLFTYMMAAFPAGLVIYWTWSNLLAIAQQWYIMRRMG 592


>gi|163733766|ref|ZP_02141208.1| putative inner membrane protein translocase component YidC
           [Roseobacter litoralis Och 149]
 gi|161392877|gb|EDQ17204.1| putative inner membrane protein translocase component YidC
           [Roseobacter litoralis Och 149]
          Length = 606

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 213/605 (35%), Positives = 331/605 (54%), Gaps = 28/605 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ------PNQVDNSYAA 55
           ++N N  +A ALS +++  W   +  P  E       + +          P+   ++  +
Sbjct: 3   DQNKNLILATALSFVVILVWFVLFPPPEPEIPLTSETSTELTPDAATGSLPSVTSDTAPS 62

Query: 56  VLID--DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
           V+I+   R+ AL  +PRVE+    L GSI+L G + DDL+L+ Y      ++ IVT+LSP
Sbjct: 63  VVIEGETRSAALEEAPRVEIATDRLKGSISLLGGRIDDLSLKDYRETQEDDADIVTMLSP 122

Query: 114 SNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
             +  AY+A   + + A     ++P  +T W +I G IL+   PI L + N   + F R 
Sbjct: 123 VGSPGAYYALYGWAAGAGVDPSQVPGPDTEWQVIDGDILSVDAPITLQWNNGAGLSFTRI 182

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
           I +D++Y+F+I  +V N S   +  +P G + RH        F +    +  + D  L E
Sbjct: 183 IEIDDNYMFEITQSVANTSDAPVTVAPYGILARHGEPADLKNFFILHEGVVAMADGELTE 242

Query: 232 QKYSDIEKSSISNFHESN---------SWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
             + DI +  +                 W+G +D +W SV IP    S     KY     
Sbjct: 243 TNWDDIPEFPVDQREGVPAERIENVLNGWIGFTDHFWMSVLIPDPSASARLTTKYRP-RA 301

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             YQA+      T+ PG S++ T  LFAGAKE+ TI +Y+ D  + RF   IDWGWF+F+
Sbjct: 302 DIYQAETVLPAQTVAPGTSVSATTQLFAGAKEWETIRNYQTD-GVDRFIDSIDWGWFFFL 360

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            KP+F L+ Y    +GN G AI+  T+ +K +  PLA K YVS A MK +QP++++L+E+
Sbjct: 361 TKPIFFLLHYLNAFIGNMGWAIIGLTLIIKAILLPLAYKSYVSMAKMKELQPQMEKLKEE 420

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
                 Q +Q+ M++LYK   +NP AGC PILLQIP+FF++YKVI +++E+RHAPF+G  
Sbjct: 421 AGD-DRQKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPFFGPF 479

Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           +DL+A DPT+I   +G+LPF  P        + +GI P+++ +SM++Q K++P P D  Q
Sbjct: 480 QDLSAPDPTSIMNFYGLLPFDGPEPGSIMALIFIGILPLLLGISMWMQQKLNPAPTDPTQ 539

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
            MI  WMP VF+F L  F +GL++YW  +N I+  QQ +IM+  G +  +   ++  F K
Sbjct: 540 QMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFAQQYMIMRSQGYKPDVFGNIKGGFQK 599

Query: 577 NYNSQ 581
                
Sbjct: 600 KTKPD 604


>gi|85705859|ref|ZP_01036955.1| putative inner membrane protein translocase component YidC
           [Roseovarius sp. 217]
 gi|85669447|gb|EAQ24312.1| putative inner membrane protein translocase component YidC
           [Roseovarius sp. 217]
          Length = 611

 Score =  447 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 212/599 (35%), Positives = 332/599 (55%), Gaps = 22/599 (3%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPR---IEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           ++N N   A ALS +++  W   +  P    ++         Q+V  P     + A    
Sbjct: 3   DQNKNLIFATALSFLVILVWFVMFPPPESPAVDPNAPVPSATQSVPAPVADSTADATTTQ 62

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                    +PR+ +  PSL G+I+L+G + DDL L+ Y   +   S IV LL+P  ++ 
Sbjct: 63  TAAPATEPDAPRLNIDTPSLQGTISLQGGRIDDLFLKNYRETIDPASDIVRLLAPVGSEA 122

Query: 119 AYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
            Y+A   +   A     ++P SNT+W + SG+ LTPT+PI L + N   ++F R +S+DE
Sbjct: 123 PYYALYGWAPGAGLTADQVPGSNTLWQIESGETLTPTSPITLSWDNGAGLIFRRELSVDE 182

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            ++F +  +V N     +  +P G + RH        F +    +  + D +L E KY D
Sbjct: 183 DFMFSVRQSVENTGASAVSLAPYGILARHGRPADLKKFFILHEGLIGMADGTLSEIKYDD 242

Query: 237 IEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
           +E+   +              N W+G +D YW +  IP+    F S  K+       +Q 
Sbjct: 243 VEEYPFNAREGAPAEVTQVTENGWIGFTDHYWMTTLIPASGNPFKSVSKF-DPQRGIFQT 301

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
           +      T+ PG++ +    LFAGAKE+ TI  Y+ +  + RF   IDWGWF+F+ KP+F
Sbjct: 302 ETVQPTQTVEPGQTASADTRLFAGAKEWATIRAYQNEQGVDRFLDSIDWGWFFFLTKPIF 361

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
             + + + ++GN G AI+  T+ +K L  PLA K YVS A MK +QP++++++E      
Sbjct: 362 AALHWLHAIIGNMGWAIIALTLLIKALVLPLAYKSYVSMAKMKELQPQMEKIKE-TAGDD 420

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q LQK M++LYK   +NP AGC PILLQIP+FF++YKVI ++LE+RHAP+  WIKDL+A
Sbjct: 421 RQKLQKEMMELYKREKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHAPWVAWIKDLSA 480

Query: 468 ADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
            D ++++ L+GILP+  P        + +GI P+ + +SM++Q K++P P D  Q MI  
Sbjct: 481 PDTSSLYNLWGILPWAAPEPGSVLALIFIGILPLCLGVSMWLQQKLNPSPTDPTQKMIFA 540

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           WMP VF+F L SF +GL+IYW  +NVI+  QQ VIM+ HG +  +   + S+F +   +
Sbjct: 541 WMPWVFMFMLGSFASGLVIYWIANNVITFSQQYVIMRSHGHKPDVFGNILSSFKRKKPA 599


>gi|254439216|ref|ZP_05052710.1| 60Kd inner membrane protein [Octadecabacter antarcticus 307]
 gi|198254662|gb|EDY78976.1| 60Kd inner membrane protein [Octadecabacter antarcticus 307]
          Length = 590

 Score =  446 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 202/592 (34%), Positives = 324/592 (54%), Gaps = 18/592 (3%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ----PNQVDNSYAAVL 57
           ++N N  +A ALS I++  W   +  P + E     +   T         QV    A + 
Sbjct: 3   DQNKNLILATALSFIVILIWFVLFPPPDVTEPAPTAEVTSTDGTTLGVDAQVPTQVAVLP 62

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
                 A++ +PR+ + + +L GS++L G + DDL+L+ Y + + S++ +V LLSP  T+
Sbjct: 63  PLSAEDAIADAPRIMIDSENLTGSLSLTGGRIDDLSLKDYRVTLDSDADLVRLLSPIGTE 122

Query: 118 NAYFAELDYVST--ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
             Y+A   +V+   A   ++P ++T W L SG  L P + I L++ N   + F +T ++D
Sbjct: 123 APYYALNGWVAAVGATADQVPGASTQWQLESGDTLEPGSDITLIWDNGAGLTFRKTFAVD 182

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV--EQK 233
           E++LF +  TV N++  +I   P G + RH        F   EG + +            
Sbjct: 183 ENFLFTVTQTVENSTGAEIALRPYGLVARHGEPDQIGFFIQHEGVVRMSDGSMEEINYGD 242

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
             D+         E N W+G SD+YW +  IP+    F S  K+ ++    YQ +     
Sbjct: 243 MPDLTSDEGRIEVEENGWIGFSDQYWMTALIPTPGRDFRSTAKFANN---IYQIETVYPL 299

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
            T+  G + +     FAGA+E+  I  Y+ DL I RF   IDWGWF+F+ KP+F ++ + 
Sbjct: 300 TTVASGATASAETQFFAGAQEWVVIRSYQDDLGIDRFLDSIDWGWFFFLTKPIFAVLHWL 359

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
             L+GN G +I+  T  +K L  PLA K YVS A M+ +QP++ +L+E       + LQK
Sbjct: 360 NGLIGNMGWSIICLTFVIKALLLPLAYKSYVSMAKMRELQPEMAKLKEAAGDDREK-LQK 418

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            M+ LYK + +NP +GC PIL+QIP+FF++YKVI +++E+RHAP+ GWI DL+A D + +
Sbjct: 419 GMMSLYKENKVNPASGCLPILMQIPIFFSLYKVIFVTIELRHAPWIGWINDLSAPDTSTL 478

Query: 474 FTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527
           + LFG+LP+  P        + +G+ PI++ +SM++Q K++P P D  Q MI  WMP VF
Sbjct: 479 YNLFGLLPWGAPAPDSILALVFIGVMPIVLGISMWLQQKLNPAPTDPTQKMIFAWMPWVF 538

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           +F L SF +GL++YW  +N I+ +QQ  IM+  G +  L   +      +  
Sbjct: 539 MFMLGSFASGLVLYWIANNTITFMQQYAIMRSQGFKPDLFGNITGRKDSDPE 590


>gi|259415716|ref|ZP_05739636.1| inner membrane protein OxaA [Silicibacter sp. TrichCH4B]
 gi|259347155|gb|EEW58932.1| inner membrane protein OxaA [Silicibacter sp. TrichCH4B]
          Length = 611

 Score =  445 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 218/607 (35%), Positives = 333/607 (54%), Gaps = 30/607 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
           ++N N  +A ALS +++  W  F+  P        +    T    +    + A    +  
Sbjct: 3   DQNKNLLLATALSFLVILGWYFFFPPPEEAPQPAAQVTETTATPGDTSGPAAAPSAGEAT 62

Query: 62  AQALS----------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
           A+A +           +PR+ +  P + GSI+LKG + DDL L+ Y   +  +SPIVTLL
Sbjct: 63  AEADAAATAEVDAAEDAPRLAINTPRVEGSISLKGGRIDDLRLKDYRETLDDDSPIVTLL 122

Query: 112 SPSNTKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           SP+   NAY+A   +         ++P +NT W    G  LTP T + L + N   + F 
Sbjct: 123 SPAGQANAYYALYGWAPGTGLGIEDVPTANTRWQAADGATLTPETSVTLTWDNGKGLTFS 182

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
           R I++DE Y+F I  +VTN S + +  +P G + RH        F V    +  + D  L
Sbjct: 183 REIAIDEDYMFSITQSVTNTSGESVALAPYGTLARHGLPANLENFFVLHEGVVGMADGEL 242

Query: 230 VEQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
            E  Y D+          S         N W+G +  YW S  IP+   +F S  KY  +
Sbjct: 243 AEIDYDDMTDFDPDPRDGSRSQITSVTENGWIGFTGHYWMSTLIPAPGDAFRSIVKY-DE 301

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
               YQ       +T+  G+S + +  LFAGAKE+ TI  YE+   I  F   IDWGWF+
Sbjct: 302 RRDIYQTDVVLPTVTLAAGESTSASTQLFAGAKEWATIREYERG-GIAGFLDSIDWGWFF 360

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           F  KP+F ++ +    +GN G+AI+  T  +K+L FPLA K Y S A MK +QP++++LR
Sbjct: 361 FFTKPIFAVLHWLNAAIGNMGVAIIALTFLLKILVFPLAYKSYASMARMKELQPEMEKLR 420

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           E+      Q +QK M++LYK   +NP AGC PIL+QIP+FF++YKVI ++LE+RH+ F+G
Sbjct: 421 ERAGD-DRQKMQKEMMELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHSAFFG 479

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADK 514
             +DL+A DPT+++ LFG+LP+  P        + +GI PI++ +SM++Q K++P PAD+
Sbjct: 480 PFQDLSAPDPTSLYNLFGLLPWGAPAPDSLLALVFIGILPILLGISMWLQQKLNPAPADE 539

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574
            Q MI  WMP VF+F L  F +GL++YW  +NVI+  QQ +IM+ HG    +   ++S+F
Sbjct: 540 TQKMIFAWMPWVFMFMLGGFASGLVVYWITNNVITFTQQYLIMRSHGYTPDVFGNIKSSF 599

Query: 575 SKNYNSQ 581
            +   ++
Sbjct: 600 KRGEKAE 606


>gi|83594668|ref|YP_428420.1| putative inner membrane protein translocase component YidC
           [Rhodospirillum rubrum ATCC 11170]
 gi|83577582|gb|ABC24133.1| protein translocase subunit yidC [Rhodospirillum rubrum ATCC 11170]
          Length = 595

 Score =  444 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 215/598 (35%), Positives = 335/598 (56%), Gaps = 37/598 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ-------------TVKQPN 47
           M +  N  +AI LS+ +++ ++ F+   +      ++ + Q             +V+ P 
Sbjct: 1   MLQQRNLILAIVLSMAVLFGFEYFFGAKQPPMTAQQQDSAQMAAPSNGQMAAPSSVQAPG 60

Query: 48  QVDNSYAAVLIDDRAQALSM--------------------SPRVELKNPSLIGSINLKGA 87
           Q   +   V     A   +                     SPR+ +    L GSI L+GA
Sbjct: 61  QSPVAAPQVPAQPGAAVPTPGGMTPGAASLSREEALAADISPRIGIDTARLHGSIRLRGA 120

Query: 88  QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147
           + DDL+L  Y   V   SP ++LLSP      Y+AE  +V+    +++P+++T+W    G
Sbjct: 121 RIDDLSLVDYRETVDPQSPEISLLSPPGAPLPYYAEFGWVAGTPGVKVPDADTLWQADRG 180

Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207
            +     P+ L + N   + F R I++D  ++F I   V N     +   P G + R   
Sbjct: 181 ALGVDA-PVTLTWDNGEGLRFIRKIAIDHDFMFSITQAVENTGAGAVTLFPYGLVSRINT 239

Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267
               N + + EG + V    +L E KYS ++         +  W+GI+DKYW +  +  +
Sbjct: 240 PALLNYYILHEGPLGVFD-GTLKEVKYSALKDDGEVKHTSTGGWMGITDKYWLTALVTDQ 298

Query: 268 ETSFHSQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326
                 +F Y   DG   YQA F     T+ PG  I T+N LF+GAKE   +  Y  +L 
Sbjct: 299 SMPVTGRFLYQPRDGRDGYQADFLGAAFTVEPGGRIETSNHLFSGAKEVKLLDRYTDELG 358

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
           I  F++ ID+GWFYF+ KP F+ + + + ++GN G+AI+  TV +KL+FFPLA K Y S 
Sbjct: 359 IKNFDLAIDFGWFYFMTKPFFLSIQFLHGILGNMGLAILAFTVVLKLVFFPLANKSYRSM 418

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
           + MK +QP++ +L+E+FK      L + M+ LYK   +NPL+GC PI++QIPVFFA+YKV
Sbjct: 419 SKMKLLQPELKKLQERFKDDRA-RLNQEMMSLYKKEQVNPLSGCLPIVIQIPVFFALYKV 477

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
           + +S+EMRH PF+GWI+DLAA DPT +F LFG++P+  P  + +G WP+IM ++M++Q K
Sbjct: 478 LFVSIEMRHEPFYGWIRDLAAPDPTTVFNLFGLIPWDPPNMLMLGAWPLIMGVTMWMQQK 537

Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           ++P PAD  QA I+ ++P++F F L+ F AGL+IYW+W+N++SI QQ VIMK  GA+ 
Sbjct: 538 LNPTPADPTQAKIMMFLPIMFTFMLAHFAAGLVIYWTWNNLLSITQQWVIMKRMGAKT 595


>gi|148556519|ref|YP_001264101.1| putative inner membrane protein translocase component YidC
           [Sphingomonas wittichii RW1]
 gi|148501709|gb|ABQ69963.1| protein translocase subunit yidC [Sphingomonas wittichii RW1]
          Length = 577

 Score =  444 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 210/570 (36%), Positives = 316/570 (55%), Gaps = 12/570 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           ME   N  +AI LS ++++ WQ     F+   +      E    + + QP     +    
Sbjct: 1   MENQRNMILAIVLSALVLFGWQFLGDRFFPPAKPPVTKIEGGQEKVLPQPGADPAAAGPK 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
            I  RA  L  +PRV +  P L GSINLKGA+ DDL L+ Y   V+ N+P + LLSP  +
Sbjct: 61  AIRARAAVLRETPRVAIDTPKLAGSINLKGARIDDLVLKAYRETVAKNAPPIRLLSPLGS 120

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
             AY+A   +  T + ++ P  NTVW   SG  LTP TP+ L + N     FE  I++D 
Sbjct: 121 PAAYYAGFGW--TGDGVDAPGPNTVWT-ASGTALTPETPVTLSWTNTRGQRFETVIAVDR 177

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS- 235
            Y+F I   + N     +   P G I +       +++ +  G I V  D +  +  +  
Sbjct: 178 DYMFTITQKLVNGGAGAVAARPYGLISKDGVSKDPSSWTLHTGPIGVFNDAANYDLSFKK 237

Query: 236 -DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
            D        F  +  WLG  DKYW +  +P  + S  + F         YQA  S   +
Sbjct: 238 LDEAGQPGIRFASTGGWLGFGDKYWLTALVPDSKASVDAGFLST--APQVYQAVESGRAL 295

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
            I PG++ + +   FAGAKE   +  YE D  +P F   IDWGWF  + KP+F ++   +
Sbjct: 296 VIAPGQAGSVSQRFFAGAKEVALLDRYENDQGVPLFSRAIDWGWFRVLEKPIFWVLDQVF 355

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
            LVGNFG+AI++ T  V+ L FP+A+KQ+ S A M+ +QPK+ EL+E+ K   P  LQ+ 
Sbjct: 356 KLVGNFGVAIIILTFLVRGLMFPIAQKQFRSMAGMRRVQPKMKELQERLKDDKP-RLQQE 414

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           +++LY+   +NPLAGC PIL+QIPVF+A+YKV+ +++EMRH PF  WI+DL+A DP ++ 
Sbjct: 415 LLKLYQEEKVNPLAGCLPILVQIPVFYALYKVLMVTIEMRHQPFVLWIRDLSAPDPLHVL 474

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534
            LFG+L F  P F+ +G+  +++ +SM++Q K++P P D  Q  +   MP + +F ++ F
Sbjct: 475 NLFGLLDFTPPAFLGIGVLALLLGVSMWLQFKLNPQPMDDAQKQVFALMPWIMMFIMAPF 534

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            AGL+IYW  SN ++I QQA + + H  E 
Sbjct: 535 AAGLLIYWVTSNFLTIAQQAWLYRQHPVEP 564


>gi|254464722|ref|ZP_05078133.1| 60 kDa inner membrane insertion protein [Rhodobacterales bacterium
           Y4I]
 gi|206685630|gb|EDZ46112.1| 60 kDa inner membrane insertion protein [Rhodobacterales bacterium
           Y4I]
          Length = 600

 Score =  444 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 223/600 (37%), Positives = 334/600 (55%), Gaps = 23/600 (3%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
           ++N N  +A  LS +++  W   +  P  E+      +         +  S AA  +D  
Sbjct: 3   DQNKNLILATVLSFLVILGWYTLFPPPEPEQAPETAVSETAPAGNTALAPSAAAEAVDSS 62

Query: 62  AQALSMSP---RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           A A + +P   R+ +  P + GSI+L+G + DDL+L+ Y   + +NSPIV LL P     
Sbjct: 63  APAQAEAPQAARLAIDTPRVTGSISLQGGRIDDLSLKDYRETLDANSPIVKLLKPVGEAQ 122

Query: 119 AYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
           AY+A   +   A     ++P +NTVW+  +   LTP +P+ L + N   + F RTIS+DE
Sbjct: 123 AYYALYGWAPGAGLSLDDVPGANTVWSAGADATLTPDSPVTLTWDNGKGLTFSRTISVDE 182

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            Y+F I  +V N S   +  +P G + RH        F +    +  + D  L E  Y D
Sbjct: 183 DYMFSITQSVANASGGTVSLAPYGTLARHSQPADLKNFFILHEGLVGMSDGELAEIDYDD 242

Query: 237 IEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
           +          S         N W+G +D YW S  +P+   +F S  K+  +    YQ 
Sbjct: 243 MADFEADARDGSKAEVRQVAENGWIGFTDHYWMSTLVPAPGQAFRSIAKF-DERRDIYQT 301

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
                 +T+  G+S   T  LFAGAKE+ TI  Y+K   I  F  +IDWGWF+F+ KPMF
Sbjct: 302 DIVLPTVTVADGQSSEVTTQLFAGAKEWETIRGYQKA-GIQGFLDVIDWGWFFFLTKPMF 360

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+     L+GN G AI+  TV +K+L FPLA K Y S A MK +QP++++L+E+     
Sbjct: 361 WLLHNLNVLIGNMGWAIIGLTVVIKILVFPLAYKSYASMAKMKELQPEMEKLKERAGD-D 419

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q +QK M++LYK   +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G  +DL+A
Sbjct: 420 RQKMQKEMMELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQDLSA 479

Query: 468 ADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
            DPT+IF LFG+LP+  P        + +GI PI++ +SM++Q K++P P D  Q MI  
Sbjct: 480 PDPTSIFNLFGLLPWAAPAPESILALVFIGILPILLGVSMWLQQKLNPAPTDPTQQMIFA 539

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           WMP VF+F L  F +GL++YW  +N I+  QQ +IM+ HG    +   ++S+F K   ++
Sbjct: 540 WMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYSPDVFGNIKSSFKKKPKAE 599


>gi|254512338|ref|ZP_05124405.1| 60 kDa inner membrane insertion protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221536049|gb|EEE39037.1| 60 kDa inner membrane insertion protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 607

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 208/607 (34%), Positives = 333/607 (54%), Gaps = 31/607 (5%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI----QTVKQPNQVDNSYAAVL 57
           ++N N  +A  LS +++  W   +  P       + +        V+ P+          
Sbjct: 3   DQNKNLILATVLSFLVIIVWFVLFPPPEPTPGEEQAEIAVLEGDEVQTPSASGTVGEVTA 62

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
             + A     +PRV++  P L GS++L G + D+L L+ Y + +   +PIV LL+P  T+
Sbjct: 63  ATEEALPEEQAPRVQIDTPRLKGSLSLSGGRIDELFLKDYKVSIEEGAPIVELLAPVGTE 122

Query: 118 NAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
           +AY+A   +   A     ++P  NTVW L  G++L    P+ LV++N N + F R IS+D
Sbjct: 123 SAYYALYGWAPAAGLAGADVPGPNTVWALEQGEVLGVDAPVTLVWENGNGLTFRRMISVD 182

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP------QTATNTFGVQEGFIAVLGDKSL 229
           + Y+F +  +V N +  ++  +P G + RH            N F + EG I +    +L
Sbjct: 183 QDYMFTVTQSVENGTQSEVGMAPYGILARHGIGEDGDLPGLKNFFILHEGVIGMSD-GTL 241

Query: 230 VEQKYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
            E  Y D+    I               + W+G +D YW +  IP   ++F +  KY   
Sbjct: 242 TEVDYGDVRDFDIDPIERAQAEVYQVNQDGWIGFTDHYWMTTLIPEPGSAFKAAAKY-DS 300

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
               YQ +     +T+ PG++   T  LFAGAKE+ TI  Y+ +  + +F   IDWGWF+
Sbjct: 301 RRKIYQTETVLPTVTVAPGETTEVTTRLFAGAKEWETIREYQAE-GVQKFIDSIDWGWFF 359

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           F+ KP+F L+     L+GN G +I+  T+ +K + FPLA K YVS A MK +QP+++ L+
Sbjct: 360 FLTKPIFWLLHNINALIGNMGWSIIGLTLIIKAILFPLAYKSYVSMAKMKELQPQMEALK 419

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           E       Q +Q+ M++LYK   +NP AGC PIL+QIP+FF++YKVI +++E+R AP++G
Sbjct: 420 EAAGD-DRQKMQQGMMELYKKEKVNPAAGCLPILMQIPIFFSLYKVIFVTIELRQAPWFG 478

Query: 461 WIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
             +DL+A DPT+I  LFG+LPF  P        + +GI P+++ +SM++Q K++P P D 
Sbjct: 479 PFQDLSAPDPTSIMNLFGLLPFAGPQPDTFLALIFIGILPLLLGISMWLQQKLNPAPTDP 538

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574
            QAMI  WMP VF+F L SF +GL++YW  +N I+  QQ +IM+  G +  +   ++S F
Sbjct: 539 TQAMIFAWMPWVFMFMLGSFSSGLVVYWIANNTITFTQQYLIMRSQGYKPDVFGNIKSGF 598

Query: 575 SKNYNSQ 581
            +   + 
Sbjct: 599 KRTPKTD 605


>gi|163740285|ref|ZP_02147679.1| putative inner membrane protein translocase component YidC
           [Phaeobacter gallaeciensis 2.10]
 gi|161386143|gb|EDQ10518.1| putative inner membrane protein translocase component YidC
           [Phaeobacter gallaeciensis 2.10]
          Length = 605

 Score =  442 bits (1135), Expect = e-122,   Method: Composition-based stats.
 Identities = 213/604 (35%), Positives = 331/604 (54%), Gaps = 27/604 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVY-------PRIEEMNNERKNIQTVKQPNQVDNSYA 54
           ++N N  +A ALS +++  W  F+           +        ++ +            
Sbjct: 3   DQNKNLLLATALSFLVILGWYVFFPPPEPQPQPDAVVAETAPAGDVVSAPAAASPAAGSE 62

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
              +   A+  + +PR+ ++ P + G+I+L G + DDL+L+ Y + +  ++ IV +LSP+
Sbjct: 63  GAAVTAEAETAADAPRLTIETPRVSGTISLLGGRLDDLSLKDYRVSLEEDAAIVKMLSPA 122

Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
              NAY+A   +   A     ++P +NT+W       LTP +P+ L + N   + F RTI
Sbjct: 123 GDPNAYYALYGWAPGAGLGPDDVPGANTLWQAEGDATLTPDSPVTLTWDNGKGLTFNRTI 182

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
           ++D+ YLF I  +VTN S   +  +P G + RH        F +    +  + D +L E 
Sbjct: 183 AVDQDYLFTITQSVTNASGSTVALAPYGTLARHGEPQDLKNFFILHEGVIGMADGTLAEI 242

Query: 233 KYSDIEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
            Y D+    +             E+N W+G +D YW S  +P    +F S  K+  +   
Sbjct: 243 DYDDMTDFEVDARSGARAEVTQVETNGWIGFTDHYWMSTLVPEPGQAFRSIAKF-DERRE 301

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            YQ       +T+  G +   T  LFAGAKE+ TI  Y+KD  I  F   IDWGWF+F+ 
Sbjct: 302 IYQTDIVLPTVTVAAGDTSEVTTMLFAGAKEWATIRGYQKD-GIEGFLDSIDWGWFFFLT 360

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP+F ++ +   L+GN G AI+  TV +KLL FPLA K Y S A MK +QP+++E++EK 
Sbjct: 361 KPIFAVLHWLNALIGNMGWAIIGLTVLIKLLVFPLAYKSYASMAKMKELQPRMEEIKEKA 420

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                Q LQ+ M+ LYK   +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G  +
Sbjct: 421 GD-DRQKLQQEMMALYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQ 479

Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           DL+A DPT+I  LFG+LP   P        + +GI PI++ +SM++Q K++P P D  Q 
Sbjct: 480 DLSAPDPTSIMNLFGLLPMAAPVEGTLMATIFIGILPILLGISMWLQQKLNPAPTDPTQQ 539

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           MI  WMP VF+F L  F +GL++YW  +N I+  QQ +IM+ HG +  +   ++S F K 
Sbjct: 540 MIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSGFKKT 599

Query: 578 YNSQ 581
             ++
Sbjct: 600 PKAE 603


>gi|310816968|ref|YP_003964932.1| inner membrane protein oxaA, putative [Ketogulonicigenium vulgare
           Y25]
 gi|308755703|gb|ADO43632.1| inner membrane protein oxaA, putative [Ketogulonicigenium vulgare
           Y25]
          Length = 612

 Score =  442 bits (1135), Expect = e-122,   Method: Composition-based stats.
 Identities = 203/602 (33%), Positives = 315/602 (52%), Gaps = 25/602 (4%)

Query: 1   ME-RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN-----QVDNSYA 54
           ME +N N  +A  LS++++  W   +          + +                  + +
Sbjct: 1   MENQNKNLILATVLSLVVIVVWFFLFPPEATNPTLTDEQTTSVATDGTLPVGGAGSTAGS 60

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
              I D   + + + RV ++ P L GSI+L G + DDL L  Y   +  +S  V LL P 
Sbjct: 61  LEAITDADASPATAARVGIETPRLSGSISLLGGRIDDLFLSDYQETIDEDSATVRLLRPV 120

Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLIS-GKILTPTTPIKLVFKNANNILFERT 171
             + AY+A   + +        +P  +T+W+L S    LTP TP+ LV+ N    +F  T
Sbjct: 121 GERGAYYASFGWAAAQGIAPEAVPGPDTLWSLESANDTLTPETPVTLVWDNGAGQVFRTT 180

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
            ++D  Y+F +  +V N     +   P G + RH        F +    I  + D  L E
Sbjct: 181 FAIDADYMFTVDQSVQNMGDAAVEMRPYGLVRRHGMPEGLREFFILNEGIVRMADGRLEE 240

Query: 232 QKYSDIEKSS--------ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
            KYS +   +             + + W+G +D YW +  IP +   F S  KYL     
Sbjct: 241 MKYSKMSDMNDAELGVPAEVAEAQESGWIGFTDHYWMTTLIPEQGQPFRSVQKYLP-SRD 299

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            +Q +       +  G  +T +  LFAGAKE+ TI  Y+ +  +PRF   IDWGWFYF+ 
Sbjct: 300 IFQVEAVMPRQDVAAGAEVTISTRLFAGAKEWATIREYQNEDGVPRFIDSIDWGWFYFLT 359

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP+F ++ +    +GN G +I+  T+ +K +  PLA K YVS A MK +QP++++L+ + 
Sbjct: 360 KPIFSVLHWLNQHIGNMGWSIIALTLILKAIVLPLAYKSYVSMARMKELQPELEKLQARH 419

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
           K    Q LQ  M++LYK + +NP +GC P+++QIP+FF++YKVI +++E+RHAP+ GW++
Sbjct: 420 KD-DRQALQTGMMELYKKNKVNPASGCLPMIVQIPIFFSLYKVIFVTIELRHAPWIGWLQ 478

Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           DL+A DPT+I  LFG+LP+  P          +G+ PI + LSM++Q K++P P D  Q 
Sbjct: 479 DLSAPDPTSILNLFGLLPWGTPEIDSFFFIFSLGVLPIFLGLSMWLQQKLNPLPPDPTQR 538

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           MI  WMP VF+F L SF +GL++YW  +NVI+ VQQ  IM  HG    L   +   F + 
Sbjct: 539 MIFAWMPWVFMFMLGSFSSGLVLYWIANNVITFVQQYSIMTYHGHRPDLFGNILGGFKRK 598

Query: 578 YN 579
             
Sbjct: 599 PK 600


>gi|163739492|ref|ZP_02146902.1| 60 kDa inner membrane insertion protein [Phaeobacter gallaeciensis
           BS107]
 gi|161387245|gb|EDQ11604.1| 60 kDa inner membrane insertion protein [Phaeobacter gallaeciensis
           BS107]
          Length = 605

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 213/604 (35%), Positives = 333/604 (55%), Gaps = 27/604 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVY-------PRIEEMNNERKNIQTVKQPNQVDNSYA 54
           ++N N  +A ALS +++  W  F+           +        ++ +            
Sbjct: 3   DQNKNLLLATALSFLVILGWYVFFPPPEPQPQPDAVVAETAPAGDVVSAPAAASPAAGSE 62

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
              +   A+  + +PR+ ++ P + G+I+L G + DDL+L+ Y + +  ++ IV +LSP+
Sbjct: 63  GAAVTAEAETAADAPRLAIETPRVSGTISLLGGRLDDLSLKDYRVSLEEDAAIVKMLSPA 122

Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
              NAY+A   +   A     ++P +NT+W       LTP +P+ L + N   + F RTI
Sbjct: 123 GDPNAYYALYGWAPGAGLGPDDVPGANTLWQAGGDATLTPDSPVTLTWDNGKGLTFNRTI 182

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
           ++D+ YLF I  +VTN S + +  +P G + RH        F +    +  + D +L E 
Sbjct: 183 AVDQDYLFTITQSVTNASGNTVALAPYGTLARHGEPQDLKNFFILHEGVIGMADGTLAEI 242

Query: 233 KYSDIEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
            Y D+    +             E+N W+G +D YW S  +P    +F S  K+  +   
Sbjct: 243 DYDDMTDFEVDARSGARAEVTQVETNGWIGFTDHYWMSTLVPEPGQAFRSIAKF-DERRE 301

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            YQ       +T+  G++   T  LFAGAKE+ TI  Y+KD  I  F   IDWGWF+F+ 
Sbjct: 302 IYQTDIVLPTVTVADGETSEATTMLFAGAKEWATIRGYQKD-GIEGFLDSIDWGWFFFLT 360

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP+F ++ +   L+GN G AI+  TV +KLL FPLA K Y S A MK +QP+++E++EK 
Sbjct: 361 KPIFAVLHWLNALIGNMGWAIIGLTVLIKLLVFPLAYKSYASMAKMKELQPRMEEIKEKA 420

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                Q LQ+ M+ LYK   +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G  +
Sbjct: 421 GD-DRQKLQQEMMALYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQ 479

Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           DL+A DPT+I  LFG+LP   P        + +GI PI++ +SM++Q K++P P D  Q 
Sbjct: 480 DLSAPDPTSIMNLFGLLPMAAPVEGTLMATIFIGILPILLGISMWLQQKLNPAPTDPTQQ 539

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           MI  WMP VF+F L  F +GL++YW  +N I+  QQ +IM+ HG +  +   ++S F K 
Sbjct: 540 MIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSGFKKT 599

Query: 578 YNSQ 581
             ++
Sbjct: 600 PKAE 603


>gi|126728217|ref|ZP_01744033.1| putative inner membrane protein translocase component YidC
           [Sagittula stellata E-37]
 gi|126711182|gb|EBA10232.1| putative inner membrane protein translocase component YidC
           [Sagittula stellata E-37]
          Length = 600

 Score =  441 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 208/600 (34%), Positives = 334/600 (55%), Gaps = 24/600 (4%)

Query: 1   MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP--------NQVDN 51
           M+  N N F+A ALS +++  W   +      E  N    +     P             
Sbjct: 1   MDEQNKNLFLATALSFVVILVWFILFPPQDPVEDPNAPAEVSQTADPATGVAAVPEAAPG 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
           + AA    +   A+  +PR+ L    L GSI+L G + DDL L+ Y + + S+  IV + 
Sbjct: 61  TEAAAPAGEPVDAVDDAPRLPLDTARLEGSISLTGGRLDDLRLKDYTVSLDSDE-IVQVF 119

Query: 112 SPSNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
               + +AY+    +         E+P +NT W++ +G+ LT  TP+ L + + + ++F 
Sbjct: 120 HRVGSSDAYYTLYGWAPGGGLSMDEVPGANTPWSVETGETLTTETPVTLRWDSPSGLIFR 179

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
           RTI++DE+Y+F +  T+ N S   +  +P G + RH        F +       + D  L
Sbjct: 180 RTIAVDENYMFTVTQTIENASDASVSLAPYGVLARHGEPQNVKKFFILHEGGISMIDGEL 239

Query: 230 VEQKYSDIEKS--SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
            E  Y D + +        E+  W G +D YW S  IP++  +  S F   +  +  YQ 
Sbjct: 240 TETDYDDFQTAGQHQDVTMETAGWTGFTDHYWMSTLIPTQPGTKVSTF--HNQSNDIYQT 297

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
                 +T+ PG++   ++ LFAGAKE+ TI  Y+K+  + RF   IDWGWF+F+ KP+F
Sbjct: 298 TARMPTMTVAPGETQQVSSKLFAGAKEWETIREYQKN-GVDRFIDSIDWGWFFFLTKPIF 356

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            ++ + + ++GN GIAI+  T+ +K+L FPLA K Y S A MK +QP++++L+E+     
Sbjct: 357 AVLHWLHGVIGNMGIAIIGLTILLKILLFPLAYKSYASMAKMKELQPEMEKLKERAGDDR 416

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            + LQK M+ LYK   +NP AGC PILLQIP+FF++YKVI ++LE+RHA F+G  +DL+A
Sbjct: 417 EK-LQKEMMALYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHANFFGPFRDLSA 475

Query: 468 ADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
            DPT+++ LFG+LP+  P        + +GI PI++ +SM++Q K++P PAD  Q MI  
Sbjct: 476 PDPTSLYNLFGLLPWAAPEAGSILALVFIGILPILLGISMWLQQKLNPAPADPTQQMIFA 535

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           WMP VF+F L  F +GL++YW  +N I+  QQ +IM+ HG    ++  ++ +F +    +
Sbjct: 536 WMPWVFMFMLGGFASGLVVYWITNNTITFTQQYLIMRSHGYHPNVLGNIKGSFKRGKKDE 595


>gi|149203002|ref|ZP_01879973.1| putative inner membrane protein translocase component YidC
           [Roseovarius sp. TM1035]
 gi|149143548|gb|EDM31584.1| putative inner membrane protein translocase component YidC
           [Roseovarius sp. TM1035]
          Length = 611

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 208/599 (34%), Positives = 335/599 (55%), Gaps = 22/599 (3%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEE---MNNERKNIQTVKQPNQVDNSYAAVLI 58
           ++N N  +A ALS +++  W   +  P               +++  P+    + A    
Sbjct: 3   DQNKNLILATALSFVVILVWFVMFPPPEPAPVDPNAAVPTATESLPTPSATGGAEATTAT 62

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                A   +PR+ +  PSL G+I+L+G + DD+ L+ Y   +   S IV L++P   + 
Sbjct: 63  TAAPVAEPDAPRLTIDTPSLKGTISLQGGRIDDIFLKNYRETIDPASEIVRLMAPVGNET 122

Query: 119 AYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
            Y+A   +   A     ++P +NT+W + SG+ LT +TP+ L + N   ++F R +S+DE
Sbjct: 123 PYYALYGWAPGAGLTPDQVPGANTLWQVESGEKLTTSTPVTLSWDNGAGLIFRRELSVDE 182

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            ++F +  +V N     +  +P G + RH        F +    + ++ D +L E  Y D
Sbjct: 183 DFMFSVRQSVENTGATAVSLAPYGILARHGRPADLKNFFILHEGLIMMADGTLSEIDYDD 242

Query: 237 IEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
           +E+   +              N W+G +D YW +  IP+  +SF +  K+       YQ 
Sbjct: 243 VEEYPFNAREGAPAEVTQVTENGWIGFTDHYWMTTLIPAAGSSFKAVAKF-DPQRGIYQT 301

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
           +      T+ PG++ +    LFAGAKE+ TI HY+ +  + RF   IDWGWF+F+ KP+F
Sbjct: 302 EAVQPTQTVEPGQTASAETRLFAGAKEWATIRHYQNEQGVDRFLDSIDWGWFFFLTKPIF 361

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            ++ +   L+GN G AI+  T+ +K L  PLA K YVS A MK++QP++++++E      
Sbjct: 362 AVLHWLNALIGNMGWAIIALTLLIKALVLPLAYKSYVSMAKMKDLQPQMEKIKE-TAGDD 420

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q LQK M++LYK   +NP AGC PILLQIP+FF++YKVI ++LE+RHAP+ GWIKDL+A
Sbjct: 421 RQKLQKEMMELYKREKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHAPWVGWIKDLSA 480

Query: 468 ADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
            DP+++F L+G+LP+  P        + +GI P+ + +SM++Q K++P P D  Q MI  
Sbjct: 481 PDPSSLFNLWGVLPWAAPEPGSIMALIFIGILPLALGISMWLQQKLNPSPTDPTQKMIFA 540

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           WMP VF+F L SF +GL+IYW  +NVI+  QQ +IM+  G +  +   + S F +   +
Sbjct: 541 WMPWVFMFMLGSFASGLVIYWIANNVITFSQQYMIMRSQGYKPDVFGNITSGFKREKPA 599


>gi|255264683|ref|ZP_05344025.1| 60 kDa inner membrane insertion protein [Thalassiobium sp. R2A62]
 gi|255107018|gb|EET49692.1| 60 kDa inner membrane insertion protein [Thalassiobium sp. R2A62]
          Length = 601

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 203/599 (33%), Positives = 328/599 (54%), Gaps = 26/599 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID-- 59
           ++N N  +A ALS +++  W   +            +  Q++                  
Sbjct: 3   DQNKNLILATALSFLVILVWFVLFPPEEPVVDPITAETAQSIDGATVPTADTGIAPTTGE 62

Query: 60  ---DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
              ++    S +PR+ ++   L GSI+L G + DDL+L+ Y +++ +   +V LLSP  T
Sbjct: 63  AEPEQEAEASDAPRIAIETEKLSGSISLLGGRLDDLSLKDYPIELDAEE-VVRLLSPVGT 121

Query: 117 KNAYFAELDYVSTANNIE--LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174
            NAY+A   + +        +P  NT+W + SG  L  +  + L + N   + F R IS+
Sbjct: 122 DNAYYALYGWAAAQGVAADAVPGPNTLWTVESGDTLNTSDAVTLAWDNGAGLTFRREISV 181

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
           DE Y+F I  +V N +  ++  +P G I RH        F + EG + +     L E  Y
Sbjct: 182 DEDYMFNITQSVENTTSTEVALAPYGFIARHGEPDTVGFFILHEGVVRMSD-GELQEIDY 240

Query: 235 SDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           +D+    I               N W+G +DKYW +  +P++ ++F S   Y +  +  Y
Sbjct: 241 NDMPDFDIDARRGAPAESIDVTENGWVGFTDKYWMTNIVPTQGSAFKSSAIY-NPRNDIY 299

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
           Q +      T+  G +   +  LFAGAKE+  I +Y+ D  I  F   IDWGWF+F+ KP
Sbjct: 300 QTEALMPTQTVAVGATAAVSTQLFAGAKEWEAIRNYQNDGGIDGFLDSIDWGWFFFLTKP 359

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+ +   ++GN G +I++ T+ +K +  PLA K YVS A MK +QP++++L+E    
Sbjct: 360 IFALLHWLNGVIGNMGWSIIVLTLIIKAILLPLAYKSYVSMARMKELQPEMEKLKEASGD 419

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q LQ+ M++LYK + +NP +GC PILLQIP+FF++YKVI +++E+RHA + GWI+DL
Sbjct: 420 -DRQKLQQGMMKLYKDNKVNPASGCVPILLQIPIFFSLYKVIFVTIELRHAEWMGWIRDL 478

Query: 466 AAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
           +A DP++I  LFG+LPF  P        + +G+ PII+ +SM++Q K++P P D  Q MI
Sbjct: 479 SAPDPSSILNLFGLLPFNTPESGSLLFILSLGVLPIILGISMWMQQKLNPAPTDPTQKMI 538

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
             WMP VF+F L SF +GL++YW  +N I+  QQ +IM+  G +  +   +R++ S+  
Sbjct: 539 FAWMPWVFMFMLGSFASGLVLYWIANNTITFTQQYLIMRSQGVKPDVFGNIRASLSRKK 597


>gi|254455826|ref|ZP_05069255.1| 60 kDa inner membrane protein [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207082828|gb|EDZ60254.1| 60 kDa inner membrane protein [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 558

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 215/563 (38%), Positives = 330/563 (58%), Gaps = 7/563 (1%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
               N   AI+LS  ++  +  ++  P I +     KN           +    +    R
Sbjct: 1   MDTRNVIAAISLSAAVIILYSLYFAPPPITKEQLAEKNKTEQTTDAPSLDQKETITEVSR 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
            +ALS S R++ +N S+IGSI+LKGA  DDL  + Y++ + S+   V LLSP + K+ Y 
Sbjct: 61  EEALSQSKRIKFENQSIIGSISLKGAAIDDLTFKEYNVALESDEK-VKLLSPRSAKDGYL 119

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181
            E  +++T  NI++PNSN+ W++    ILT  +P+KL + N   I FE+ ISLD+ +LF 
Sbjct: 120 IESGFITTDKNIDIPNSNSEWSVSGSNILTDQSPVKLTWTNDQGITFEKEISLDDKFLFT 179

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
           I   V N++  +  F P G+I+R +    +N + + EG IA L  + L+E+ Y DI++  
Sbjct: 180 IKQKVINSTNKEFDFYPYGQIIRKEIPEISNFYILHEGLIATLD-EELIEEDYDDIQEEK 238

Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301
            S       WLGISDK+W +  IP     F + F Y     A +        + +    S
Sbjct: 239 FSKT-SQKGWLGISDKFWITSLIPPNGKEFKTTFDYKDKFRANF---VGTEPLELKGNSS 294

Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361
           I     +   AK    I  Y + L I +F++ IDWG+ YFI KP+F  + YF+ L+GN+G
Sbjct: 295 IEDKLQVIVAAKRVDVIDGYAESLNIDKFDLTIDWGFLYFITKPLFYGIDYFFKLLGNYG 354

Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421
           +AI+  T+ ++L FFPLA   + S A MK +QP++  L++  K+   + LQ+ M+ LYK 
Sbjct: 355 LAIIAITICIRLAFFPLANFSFRSMAKMKALQPEMVRLKDLHKEDKMK-LQQEMMALYKK 413

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
             +NP++GC PIL+QIPVFFA+YKV+ +++EMR  PF+GWI+DL+  DPT++F LFG+LP
Sbjct: 414 EKVNPMSGCLPILVQIPVFFALYKVLFVTIEMRQMPFYGWIQDLSERDPTSLFNLFGLLP 473

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541
           + +P F+ +G WPI M +SMFIQ K++P P D  QA I  + P+     L+ FPAGL+IY
Sbjct: 474 YDVPSFLMIGAWPIAMGVSMFIQQKLNPAPTDPMQAKIFMFFPLFLTIILAPFPAGLVIY 533

Query: 542 WSWSNVISIVQQAVIMKMHGAEI 564
           W+ +N++++ QQ  IMK    + 
Sbjct: 534 WTVNNILTMAQQVFIMKRTTVKT 556


>gi|114569009|ref|YP_755689.1| protein translocase subunit YidC [Maricaulis maris MCS10]
 gi|122316769|sp|Q0ASI6|OXAA_MARMM RecName: Full=Inner membrane protein oxaA
 gi|114339471|gb|ABI64751.1| protein translocase subunit yidC [Maricaulis maris MCS10]
          Length = 592

 Score =  440 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 213/588 (36%), Positives = 346/588 (58%), Gaps = 15/588 (2%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-----YAAV 56
           E   N F+A+ L ++I+  +Q F + P  EE   E+  ++  ++    D        AA 
Sbjct: 3   EDQRNLFIALGLILVILTGYQMFVMGPAEEERRAEQAAVEASQELADPDLPASALEPAAA 62

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
              DR  AL  + RV +  PS++GS++L GA+ DD+ LR +   +  ++P V LL+P  +
Sbjct: 63  TTVDRETALGGNQRVTIDAPSVLGSLSLTGARLDDVRLRRHTETIDDDTP-VALLNPIGS 121

Query: 117 KNAYFAELDYVSTANNI-ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
            + ++A   + S  +   +LP  +T W L SG  LTP TPI L + + + + FER IS+D
Sbjct: 122 DHVFYARDGWTSATSGFTDLPGGSTEWTLASGSTLTPDTPITLTYDSPSGLHFERVISVD 181

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
           ++YLF + DTVTNNS  ++  S  G +                     + D ++V   + 
Sbjct: 182 DNYLFTLTDTVTNNSGQEVELSRYGLVRHEGRPEDETRNMAVFEGALAVIDGAMVRSSFG 241

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH-ARYQAKFSANEI 294
            +E  + +    +  W+GI+ +YW +  +P ++  F ++F+ +  G    ++A +    I
Sbjct: 242 KLEDGNQTEESGTGGWVGITQRYWMAAAVPDQDRPFTARFRTIERGEIDAFEASYVEQAI 301

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
            +  G+S+ +T  +FAGAKE   +   + ++ I RF+M I+WGW +F+ +P   L++   
Sbjct: 302 AVPAGESLASTTRIFAGAKELGVLQQVQNEVGIERFDMAINWGWLWFLTRPFVWLLTMLE 361

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
             +G FG+AI+  T+ VK++ FPLA + Y S A MK +QPK+ E++E++  +  Q  Q+A
Sbjct: 362 GALGQFGLAILALTLMVKIVMFPLANRAYASMAKMKAVQPKMAEIKERY-GADQQKQQQA 420

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           +++LYKT  INPLAGC PIL QIP+FFA+Y+ +  ++EMRHAPF+GWI+DL+AADPTNI+
Sbjct: 421 LMELYKTEKINPLAGCLPILPQIPIFFALYQTLFNAIEMRHAPFFGWIRDLSAADPTNIW 480

Query: 475 TLFGILPFYLPGF------MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
            LFG++P+   G       + +G WPIIM L+M  Q  ++PPP D  QA I  ++P+VF 
Sbjct: 481 NLFGLIPYDPTGIWLIGGVLGIGAWPIIMGLTMAAQQALNPPPPDPMQARIFAFLPIVFT 540

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
           F L+ F AGL+IYW+W+N +S++QQ +IM+ HG E  +   +     +
Sbjct: 541 FILAPFAAGLVIYWAWNNFLSVLQQYIIMRRHGNETQVDKLVARLLKR 588


>gi|83854933|ref|ZP_00948463.1| putative inner membrane protein translocase component YidC
           [Sulfitobacter sp. NAS-14.1]
 gi|83842776|gb|EAP81943.1| putative inner membrane protein translocase component YidC
           [Sulfitobacter sp. NAS-14.1]
          Length = 604

 Score =  440 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 212/597 (35%), Positives = 331/597 (55%), Gaps = 26/597 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD--------NSY 53
           ++N N   A  LS I++  W   +  P  E + +     Q     +              
Sbjct: 3   DQNKNLIFATVLSFIVILGWFLLFPPPETETITDPAATQQVTDATSTEAIVPSSAGAADN 62

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
                D+   AL  +PR+ ++   + GSI+L G + DDL+L+ Y+  +  +SPIV+LLSP
Sbjct: 63  VTDASDEATAALEEAPRIPVETARISGSISLLGGRVDDLHLKDYNTTIEKDSPIVSLLSP 122

Query: 114 SNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           + T +AY+A   +   A     ++P  NT+W L  G+ L+  TP+ L + N    LF RT
Sbjct: 123 AGTPDAYYALYGWAPGAGIAPEQVPGPNTLWTLSQGETLSVETPVTLTWDNDAGQLFSRT 182

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
           IS+DE+Y+FKI   V N S + +  +P G I RH   +    F +    +  + +  L+E
Sbjct: 183 ISIDENYMFKIEQKVENTSENTVSLAPYGLIARHGIPSDAQNFFILHEGLVAMNNGELLE 242

Query: 232 QKYSDIEKSSISNFHES-------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
             + DI +  + N   S       N W+G +  Y+ +  IP  E       KYL      
Sbjct: 243 TAWDDIPELDVVNGVPSKRIDGVTNGWIGFTGHYFMTNLIPDPEQPTRLTVKYLP-RTEI 301

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           +Q +      T+  G++ T T  LFAGAKE+  +  Y +   + +F   IDWGWF+F+ K
Sbjct: 302 FQTESVMPTQTVASGQTATVTTQLFAGAKEWEILRDY-EAQGVYKFIDSIDWGWFFFLTK 360

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F ++ +   L+GN G+AI+  T+ +K L FPLA K YVS A MK +QP++++L+ K  
Sbjct: 361 PIFWVLHHLNLLIGNMGVAIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMEKLK-KDA 419

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               Q LQ+ M++LYK   +NP AGC PILLQIP+FF++YKVI ++LE+RHAPF+G  +D
Sbjct: 420 GDDRQKLQQGMMELYKREKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHAPFFGPFQD 479

Query: 465 LAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           L+A DPT+IF  +G+LP+  P        + +GI P+++ +SMF+Q K++P P D  Q M
Sbjct: 480 LSAPDPTSIFNFYGLLPWAAPEAGTVLALVFIGILPLLLGISMFLQQKLNPAPTDPTQQM 539

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
           I  WMP VF+F L  F +GL++YW  +N I+  QQ +IM+  G +  ++  ++ +  
Sbjct: 540 IFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDILGNIKGSMK 596


>gi|254488170|ref|ZP_05101375.1| 60 kD inner-membrane protein [Roseobacter sp. GAI101]
 gi|214045039|gb|EEB85677.1| 60 kD inner-membrane protein [Roseobacter sp. GAI101]
          Length = 616

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 204/597 (34%), Positives = 325/597 (54%), Gaps = 28/597 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV----- 56
           ++N N  +A  LS I++  W   +  P      +  +   T        ++         
Sbjct: 3   DQNKNLIIATVLSFIVILGWFLLFPPPEPNTPLDGTEISATAPTDVTTPDAAVPAGTALP 62

Query: 57  -----LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
                  + RA +L  +PRV ++   L GSI+L G + DDL L+ Y   +  ++PIVTLL
Sbjct: 63  ATTADPEETRADSLEQAPRVPVETSRLTGSISLLGGRIDDLRLKDYRTTIEDDAPIVTLL 122

Query: 112 SPSNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           SP+ T +AY+A   + + A     ++P  NT+W+L SG  L+  +P+ + + N    +F 
Sbjct: 123 SPAGTDDAYYALYGWAAGAGIAPEQVPGPNTLWSLASGDTLSVGSPVTMTWDNGAGQVFS 182

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
           R IS+DE+++F++  +V N S   +  +P G I RH   T    F +    +  + +  L
Sbjct: 183 RVISVDENFMFEVEQSVQNTSETSVTLAPYGIIARHGIPTDAQNFFILHEGMVAMNNGEL 242

Query: 230 VEQKYSDIEKSSISNFHES-------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
           +E  + DI          S       N W+G +  Y+ +  IP          KYL    
Sbjct: 243 IETGWEDIPDLDPVGGVPSKRIDGVTNGWIGFTGHYFMTNLIPDPAQQSRLTAKYLP-RT 301

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             +Q +       I  G S + +  LFAGAKE+  +  Y +   + +F   IDWGWF+F+
Sbjct: 302 DIFQTEAVLPTQVIAAGSSASVSTQLFAGAKEWEALRDY-EAAGVYKFVDSIDWGWFFFL 360

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            KP+F ++ +   L+GN G+AI+  T+ +K L FPLA K YVS A MK +QP++++L+ K
Sbjct: 361 TKPIFWVLHHLNILIGNMGVAIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMEKLK-K 419

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
                 Q LQ+ M++LYK   +NP AGC PI++QIP+FF++YKVI ++LE+RHAPF+G  
Sbjct: 420 DAGDDRQKLQQGMMELYKREKVNPAAGCLPIIMQIPIFFSLYKVIFVTLELRHAPFFGPF 479

Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           +DL+A DPT+IF  +G+LP+ +P        + +GI P+++ +SMF+Q K++P P D  Q
Sbjct: 480 QDLSAPDPTSIFNFYGLLPWGVPEAGSVMALIFIGILPLLLGISMFLQQKLNPAPTDPTQ 539

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
            MI  WMP VF+F L  F +GL++YW  +N I+  QQ +IM+  G +  L+  +   
Sbjct: 540 QMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDLLGNITGG 596


>gi|254460224|ref|ZP_05073640.1| 60 kDa inner membrane insertion protein [Rhodobacterales bacterium
           HTCC2083]
 gi|206676813|gb|EDZ41300.1| 60 kDa inner membrane insertion protein [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 601

 Score =  439 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 203/603 (33%), Positives = 322/603 (53%), Gaps = 27/603 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRI------EEMNNERKNIQTVKQPNQVDNSYAA 55
           ++N N  +A ALS I++  W   +  P          ++ E   +          ++   
Sbjct: 3   DQNKNLILATALSFIVILVWFVLFPPPEPTPADPNAVISAEGDAVLPSVSAGDDADAGVN 62

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
                  +    +PR+ ++   L GSI+L G + D L L+ Y + +  ++PIV LLSP  
Sbjct: 63  TAAAQAEEPTQDAPRIAIETGRLKGSISLLGGRIDQLALKDYRVSLDDDAPIVDLLSPVG 122

Query: 116 TKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
            K+ Y+A   +   A     ++P  NT+W+  S   L+   P+ L + N N + F RTIS
Sbjct: 123 EKSPYYALYGWAPGAGLAFEQVPGPNTIWSAQSSGNLSVDAPVTLTWDNGNGLQFTRTIS 182

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
           +DE+++F +  +V N     +  +P G + RH        F +    +  + D  L E  
Sbjct: 183 VDENFMFSVAQSVENTGAGTVSLAPYGILARHGEPQNLKNFFILHEGVVAMSDGELTEID 242

Query: 234 YSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
           YSD+    ++                W+G +D+YW +  IP+    F S  KY  D    
Sbjct: 243 YSDMPDFDVNPNEGARAEVTQVAEQGWVGFTDQYWMTTLIPAPGA-FKSTAKY-DDRRDI 300

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           YQ +       + PG + + T  LFAGAKE+ TI  Y +   +  F   IDWGWF+F+ K
Sbjct: 301 YQTEAVLPTQRLAPGATASATTQLFAGAKEWATIRDY-ETAGVEGFIDSIDWGWFFFLTK 359

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F ++ Y   ++GN G AI+  T  +KL+ FPLA K  VS A MK +QP++++++E   
Sbjct: 360 PIFAVLHYLNAMIGNMGWAIIGLTFLIKLILFPLAYKSNVSMAKMKALQPQMEKIKESAG 419

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               Q LQ+ M+ +YK   +NP +GC PIL+QIP+FF++YKVI ++LE+RHAP+ GWIKD
Sbjct: 420 DDK-QKLQQDMMAMYKKEKVNPASGCLPILVQIPIFFSLYKVIFVTLELRHAPWIGWIKD 478

Query: 465 LAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           L+A DP++I  LFG+L F  P          +GI PI++ +SM++Q K++P P D  QAM
Sbjct: 479 LSAPDPSSILNLFGLLSFVPPEPGSILAIFSLGILPILLGISMWMQQKLNPAPTDPTQAM 538

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           I  WMP VF+F L +F +GL++YW  +N I+  QQ +IM+  G +  +   +++ F +  
Sbjct: 539 IFAWMPWVFMFMLGTFASGLVVYWIANNTITFTQQYLIMRSQGVKPDVFGNIKAGFKRKP 598

Query: 579 NSQ 581
             +
Sbjct: 599 KEE 601


>gi|17984422|gb|AAL53516.1| 60 kDa inner membrane protein yidc [Brucella melitensis bv. 1 str.
           16M]
          Length = 588

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 252/546 (46%), Positives = 354/546 (64%), Gaps = 3/546 (0%)

Query: 36  ERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95
             +            ++ AA     R  A++ SPR+E+  PSL GSINL GA+ DDL L+
Sbjct: 40  TPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYLK 99

Query: 96  GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155
            YH  VS  SP + LL+PS+ K  YF EL +        +P  NTVW +     LTP+TP
Sbjct: 100 KYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPSTP 159

Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNTF 214
           + L + N  N+ F+R IS+D+ Y+F + DT+ NN    +  +  GR+   ++P+ A+ T+
Sbjct: 160 VTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASATY 219

Query: 215 GVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273
            + EG I V+G   L E KY+   +   IS       W+GI+DKYWA+  IP ++  F  
Sbjct: 220 VLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFTG 279

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
           +F + ++   RYQ+   +  +T+ PG+S    N +FAGAK   TI +YE    I +F++L
Sbjct: 280 RFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDLL 339

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           IDWGWFYFI KPMF L+ + Y   GNFG+AI++ TV +K LFFPLA K Y S A MK +Q
Sbjct: 340 IDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLMQ 399

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           PK+ E+REK+     +  Q+AM++LYK   INPLAGCWP+L+QIPVFFA+YKV+ +++EM
Sbjct: 400 PKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIEM 458

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           RHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM + MF+QM+M+P P D
Sbjct: 459 RHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGIIMFLQMRMNPTPPD 518

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
             QA I  WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK  G +I L D L+  
Sbjct: 519 PTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKGL 578

Query: 574 FSKNYN 579
           F +   
Sbjct: 579 FRRKPK 584


>gi|83941456|ref|ZP_00953918.1| putative inner membrane protein translocase component YidC
           [Sulfitobacter sp. EE-36]
 gi|83847276|gb|EAP85151.1| putative inner membrane protein translocase component YidC
           [Sulfitobacter sp. EE-36]
          Length = 604

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 211/597 (35%), Positives = 330/597 (55%), Gaps = 26/597 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD--------NSY 53
           ++N N   A  LS I++  W   +  P  E + +     Q     +              
Sbjct: 3   DQNKNLIFATVLSFIVILGWFVLFPPPETETITDPAATQQVTDATSTEAVVPSSAGAADN 62

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
                D+   AL  +PR+ ++   + GSI+L G + DDL+L+ Y+  +  ++PIV+LLSP
Sbjct: 63  VTDASDEATAALEEAPRIPVETARISGSISLLGGRVDDLHLKDYNTTIEDDAPIVSLLSP 122

Query: 114 SNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           + T +AY+A   +   A     ++P  NT+W L  G+ L+  TP+ L + N    LF RT
Sbjct: 123 AGTPDAYYALYGWAPGAGIAPEQVPGPNTLWTLSQGETLSVETPVTLTWDNDAGQLFSRT 182

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLV 230
           IS+DE+Y+FKI   V N S + +  +P G I RH  P  A N F + EG +A+   + L 
Sbjct: 183 ISIDENYMFKIEQKVENTSENSVSLAPYGLIARHGIPSDAQNFFILHEGLVAMNNGELLE 242

Query: 231 EQKYSDIEKSSISNFHES------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
                  E  +++           N W+G +  Y+ +  IP          KYL      
Sbjct: 243 TAWDDIPELDAVNGVPSKRIDGVTNGWIGFTGHYFMTNLIPDPAQPTRLSVKYLP-RTEI 301

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           +Q +      T+  G++ T T  LFAGAKE+  +  Y +   + +F   IDWGWF+F+ K
Sbjct: 302 FQTESVMPTQTVARGQTATVTTQLFAGAKEWEILRDY-EAQGVYKFIDSIDWGWFFFLTK 360

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F ++ +   L+GN G+AI+  T+ +K L FPLA K YVS A MK +QP++++L+ K  
Sbjct: 361 PIFWVLHHLNLLIGNMGVAIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMEKLK-KDA 419

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               Q LQ+ M++LYK   +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G  +D
Sbjct: 420 GDDRQRLQQGMMELYKREKVNPAAGCLPILMQIPIFFSLYKVIFVTLELRHAPFFGPFQD 479

Query: 465 LAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           L+A DPT+IF  +G+LP+  P        + +GI P+++ +SMF+Q K++P P D  Q M
Sbjct: 480 LSAPDPTSIFNFYGLLPWAAPEAGTVLALVFIGILPLLLGISMFLQQKLNPAPTDPTQQM 539

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
           I  WMP VF+F L  F +GL++YW  +N I+  QQ +IM+  G +  ++  ++ +  
Sbjct: 540 IFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDILGNIKGSMK 596


>gi|99080148|ref|YP_612302.1| putative inner membrane protein translocase component YidC
           [Ruegeria sp. TM1040]
 gi|122398415|sp|Q1GJX6|OXAA_SILST RecName: Full=Inner membrane protein oxaA
 gi|99036428|gb|ABF63040.1| protein translocase subunit yidC [Ruegeria sp. TM1040]
          Length = 608

 Score =  437 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 214/598 (35%), Positives = 324/598 (54%), Gaps = 28/598 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVY--------PRIEEMNNERKNIQTVKQPNQVDNSY 53
           ++N N  +A ALS +++  W  F+            + E   +         P+    + 
Sbjct: 3   DQNKNLLLATALSFLVILGWYFFFPPPEEAPQPATEVTETAPQGDTTAPAAAPSAGAATA 62

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
                    +     PR+ +  P + GSI+LKG + DDL L+ Y   +  +SPIVTLLSP
Sbjct: 63  EVDAAAAETEITEDVPRLTIDTPRVEGSISLKGGRIDDLRLKDYRETLDDDSPIVTLLSP 122

Query: 114 SNTKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           +   +AY+A   +   A     ++P +NT+W   +G  LTP TP+ L + N   + F R 
Sbjct: 123 AGQPHAYYALYGWAPGAGLGIEDVPTANTLWQAEAGATLTPDTPVTLTWDNGKGLTFSRE 182

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
           +S+DE Y+F I  +VTN+S   +  +P G + RH        F V    +  + D  L E
Sbjct: 183 VSIDEDYMFSITQSVTNSSGASVALAPYGTLARHGEPANLENFFVLHEGVVGMADGELSE 242

Query: 232 QKYSDIEKSSISN---------FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
             Y D+                    N W+G +  YW S  IP+   +F +  KY  +  
Sbjct: 243 IDYDDMTDFDPDPRDGSRAQVNTVTENGWIGFTGHYWMSTLIPAPGEAFRAIAKY-DERR 301

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             YQ       +T+  G+S +    LFAGAKE+ TI  YE+   I  F   IDWGWF+F 
Sbjct: 302 DIYQTDVVLPTVTLAAGESTSANTQLFAGAKEWATIREYERA-GIEGFLDSIDWGWFFFF 360

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            KP+F ++ +    +GN G+AI+  T  +K+L FPLA K Y S A MK +QP++++LRE+
Sbjct: 361 TKPIFAVLHWLNAAIGNMGVAIIALTFLLKILVFPLAYKSYASMARMKELQPEMEKLRER 420

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
                 Q +QK M++LYK   +NP AGC PIL+QIP+FF++YKVI ++LE+RHA F+G  
Sbjct: 421 AGD-DRQKMQKEMMELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAAFFGPF 479

Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           +DL+  DPT++F LFG+LP+  P        + +GI PI++ +SM++Q K++P P D+ Q
Sbjct: 480 QDLSVPDPTSLFNLFGLLPWAAPAPDSLLSLVFIGILPILLGVSMWVQQKLNPAPTDETQ 539

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574
            MI  WMP VF+F L  F +GL++YW  +NVI+  QQ +IM+ HG    +   ++S F
Sbjct: 540 RMIFAWMPWVFMFMLGGFASGLVVYWITNNVITFTQQYLIMRSHGYTPDVFGNIKSGF 597


>gi|89053128|ref|YP_508579.1| putative inner membrane protein translocase component YidC
           [Jannaschia sp. CCS1]
 gi|122499543|sp|Q28UQ8|OXAA_JANSC RecName: Full=Inner membrane protein oxaA
 gi|88862677|gb|ABD53554.1| protein translocase subunit yidC [Jannaschia sp. CCS1]
          Length = 626

 Score =  436 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 219/626 (34%), Positives = 336/626 (53%), Gaps = 49/626 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV------------KQPNQV 49
           ++N N  +A  LS +++  W   +  P + E  N                          
Sbjct: 3   DQNRNLILATGLSFVVILVWFLLFPPPEMVEDPNAIPPAAETGGVETDTGIALTPPVTVA 62

Query: 50  DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
           D    A        ALS + R+++  P++ GSI+L G + DDL+LR Y  +V  +  IV 
Sbjct: 63  DAPAGADTTAPSEVALSEAARIDIDTPAVEGSISLLGGRIDDLSLRNYFTEVDGDQ-IVR 121

Query: 110 LLSPSNTKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167
           LLSP  + + Y+A   +  + +    ++P S+T W L SG ILTP +PI L + N + ++
Sbjct: 122 LLSPVGSDDPYYALYGWTPSGDLGYADVPTSDTPWELESGTILTPDSPITLAWDNGSGLI 181

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227
           F RTI +D+ ++F++  +V N    ++  +P G + RH   +    F +    +    D 
Sbjct: 182 FRRTIEIDDRFMFQVTQSVENTGGAEVNLAPYGIVARHGLPSDLQNFFILHEGVVRKVDG 241

Query: 228 SLVEQKYSDIEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
            L E  YSD+    I             E+N W+G +DKYW +  IP +  SF S  KY+
Sbjct: 242 ELSELGYSDLPDLDIIAREGVPAEVMEVETNGWIGFTDKYWMTTLIPGENQSFVSVVKYV 301

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL------------- 325
                 YQ +     ++I PG++   T  LFAGAKE   I  YE                
Sbjct: 302 PSA-EIYQTEARLPYMSIAPGETAEVTTQLFAGAKEAEAIRDYENAEPGLIASLFGAEQD 360

Query: 326 ----AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381
                IPRF   IDWGWFYF+ KP+F L+ +    +GN G+AI+  T+ VK + FPLA +
Sbjct: 361 ASRGEIPRFIDSIDWGWFYFLTKPLFWLLHWLNGAIGNMGLAIISLTLIVKAVLFPLAYR 420

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
            YVS A MK +QP+I++L+E       Q LQ+ M++LYK + +NP  GC PILLQIP+FF
Sbjct: 421 SYVSMAKMKELQPEIEKLKE-SAGDDRQKLQQGMMELYKKNKVNPAGGCLPILLQIPIFF 479

Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPI 495
           ++YKVI ++LE+RHAPF+GW+ DL+A D ++I  L+G+LP   P        + +GI P+
Sbjct: 480 SLYKVIFVTLELRHAPFFGWLNDLSAPDSSSIINLYGLLPNPAPEPESIMALIFIGILPL 539

Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           ++ +SM++Q K++P P D  QA I  W+P VF+F L SF +GL++YW  +N ++  QQ +
Sbjct: 540 LLGISMWLQQKLNPAPTDAMQAQIFAWLPWVFMFMLGSFASGLLVYWIANNTLTFTQQYL 599

Query: 556 IMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           IM+  G +  +   +RS+F K    +
Sbjct: 600 IMRSQGFKPDVFGNIRSSFKKKAKEE 625


>gi|119383628|ref|YP_914684.1| putative inner membrane protein translocase component YidC
           [Paracoccus denitrificans PD1222]
 gi|166975878|sp|A1B0E4|OXAA_PARDP RecName: Full=Inner membrane protein oxaA
 gi|119373395|gb|ABL68988.1| protein translocase subunit yidC [Paracoccus denitrificans PD1222]
          Length = 635

 Score =  435 bits (1118), Expect = e-120,   Method: Composition-based stats.
 Identities = 208/619 (33%), Positives = 326/619 (52%), Gaps = 48/619 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLID- 59
           + N N  +A+ LS +++  W  F+   P     +    + Q   QP     +    +   
Sbjct: 3   DNNRNLILAMVLSALVMLVWSIFFAPEPVPPAQDTPAASTQGTAQPEAGGPATPGAVPQG 62

Query: 60  ---------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
                      +   + + RV +++ SL G+I+L G + DDL L GY   + + SP V L
Sbjct: 63  AAPELEAAAASSDPSANAGRVAIESSSLAGTISLAGGRIDDLELTGYRETLDTRSPFVRL 122

Query: 111 LSPSNT--------------------KNAYFAELDYVSTANNIE--LPNSNTVWNLISGK 148
           LSP+                      +  Y+A   ++  A      +P   TVW + SG 
Sbjct: 123 LSPTAQTTVQAEGSPVAPGGGAELAVQKPYYAVYGWMPAAGTDPALVPGPATVWEVESGA 182

Query: 149 ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208
            L P  P+ L + N    +F RT  LD+ +LF +  T+ N        +P G + RH   
Sbjct: 183 KLGPGQPVTLRWDNGAGQIFRRTYELDDKFLFTVTQTLENTGTAPFSAAPYGILARHGKP 242

Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-------NFHESNSWLGISDKYWAS 261
              N F + EG + +   K L ++     +   +           + N W+G +DKYW +
Sbjct: 243 DTQNFFVLHEGAVGMTDGKLLEKKYKDMTKLDPLPGEGPAELVEVQENGWIGFTDKYWMT 302

Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321
              P+   SF +  KY   G   YQ +      T+ PG + T++++LFAGAK +  I+ Y
Sbjct: 303 TLAPAPGQSFTAVAKYAP-GADIYQTEARMPVQTVAPGATGTSSSYLFAGAKVWEVINGY 361

Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381
           + +  I RF   IDWGWFYF+ KP+F L+ + + ++GN G AI+  T  +KLL FPLA+K
Sbjct: 362 QTNPGIDRFVDSIDWGWFYFLTKPIFRLLHWLHGMIGNMGWAIIALTFVLKLLVFPLARK 421

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
            Y+S A MK +QP+++ ++E+      +  QK +++LYK   +NP AGC P+LLQIP+FF
Sbjct: 422 SYISMAKMKELQPQMEAIKERTGDDRMK-FQKEVMELYKREKVNPAAGCLPVLLQIPIFF 480

Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF------MHVGIWPI 495
           A+YKVI +++E+RHAP+ GWI+DLAA DP++++ LFG+LP+  PG         + +  I
Sbjct: 481 ALYKVIFVTIELRHAPWIGWIRDLAAPDPSSLWNLFGLLPWAAPGQGSFLHSFTLPVLAI 540

Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           ++ +SM++Q K++P P D  Q MI  WMP VF+F L  F +GL++YW  +N I+I+QQ  
Sbjct: 541 LLGVSMWMQQKLNPAPTDPAQKMIFAWMPWVFMFMLGGFASGLVLYWITNNTITIIQQYT 600

Query: 556 IMKMHGAEIGLIDRLRSTF 574
           IM MHG        +RS+ 
Sbjct: 601 IMSMHGHRPDFFGNIRSSL 619


>gi|83313455|ref|YP_423719.1| putative inner membrane protein translocase component YidC
           [Magnetospirillum magneticum AMB-1]
 gi|82948296|dbj|BAE53160.1| Preprotein translocase subunit YidC [Magnetospirillum magneticum
           AMB-1]
          Length = 579

 Score =  435 bits (1118), Expect = e-119,   Method: Composition-based stats.
 Identities = 220/581 (37%), Positives = 330/581 (56%), Gaps = 20/581 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------------EMNNERKNIQTV 43
           M    N FVAIA+SV I+  WQ F+   +                             + 
Sbjct: 1   MNDQRNLFVAIAISVAILIGWQYFFPTAKPPVEQAAQQQSAEQKASAPATAPTPATASSP 60

Query: 44  KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            Q      + AA     RA AL  S R+ ++ PS+ GSI L GA+ DD+ L  Y    ++
Sbjct: 61  AQVPGSPAAAAAQPAATRADALGKSRRIAIQTPSMHGSIALTGARIDDITLVKYRETPAA 120

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
           +S  + L+SP+ +   Y+AE  +V+T  N+++P  ++VW       LTP +P+ L + N 
Sbjct: 121 DSREIDLMSPAESPEPYWAEFGWVATEANVKVPGPDSVWQAQGSGPLTPASPLVLTWDNG 180

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
             + F RT ++DE+Y+F +   V N         P   + R         + + EG + V
Sbjct: 181 EGLRFVRTYTVDENYMFGVAQRVENYGTKPASLHPYALLARTGTPHVAGMYILHEGPLGV 240

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282
               +L E KY D++K   S    +  W GI+DKYW +  +P  +T    +F +      
Sbjct: 241 FD-GTLKEMKYDDLKKEGSSRHKTTGGWAGITDKYWLTALVPPAKTEITGRFVHQRLGNA 299

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
            RYQ  + A    I PGKS      LF GAK+   +  Y +   I RF++ ID+GWFYF+
Sbjct: 300 DRYQVDYLAPARMIEPGKSEEAGFHLFTGAKQVSLLDGYAEKFGIDRFDLAIDFGWFYFL 359

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            KP F L+   ++ +GN G+AI+  TV +KL  FPLA K YV+   MK +QPK+ EL+ +
Sbjct: 360 TKPFFYLLQMLHSALGNMGLAILALTVILKLAMFPLANKSYVAMGKMKKLQPKVQELQAR 419

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +       LQ+ M+ LYKT  +NP++GC PI++QIPVFFA+YKV+ +++EMRHAPF+GWI
Sbjct: 420 YADDK-MRLQQEMMALYKTEKVNPVSGCLPIMVQIPVFFALYKVLFVTIEMRHAPFYGWI 478

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DL+A DPTNIFTLFG++P+  P   H+G+WP+IM ++MF+Q K++P P D  QA ++ +
Sbjct: 479 SDLSAQDPTNIFTLFGMIPWTPPSMFHLGVWPLIMGVTMFLQQKLNPQPTDPVQAKMMQF 538

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           +P++F F L++F +GL+IYW+WSN +SI+QQ VIMK    +
Sbjct: 539 LPIIFTFLLANFASGLVIYWAWSNTLSILQQWVIMKRAEEK 579


>gi|83950483|ref|ZP_00959216.1| inner membrane protein YidC, putative [Roseovarius nubinhibens ISM]
 gi|83838382|gb|EAP77678.1| inner membrane protein YidC, putative [Roseovarius nubinhibens ISM]
          Length = 599

 Score =  435 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 202/596 (33%), Positives = 321/596 (53%), Gaps = 18/596 (3%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYV------YPRIEEMNNERKNIQTVKQPNQVDNSYAA 55
           ++N N  +A  LS++++  W   +                      T   P       + 
Sbjct: 3   DQNKNLILASILSLLVIIIWTVLFPAAETDLPADTVTTTASAPAGDTALTPGSAGGEVST 62

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
                       + RV ++ PS+ GSI+L+G + D+L L  Y   +   + IVTLL+P+ 
Sbjct: 63  ETTAPAEPLPESAARVAVETPSVTGSISLRGGRLDELALNNYRESLDPGAEIVTLLNPTG 122

Query: 116 TKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
           + + Y+A   +      N+  +P +NT+W++ SG+ LTP +P+ L+++N   + F R IS
Sbjct: 123 SASPYYALFGWAPGTGLNSDSVPGANTLWSVESGETLTPESPVTLLWENGQGLTFRREIS 182

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
           +D  Y+F I  TV N        +P G I RH        F +       + D  L E  
Sbjct: 183 VDAKYMFTIRQTVENTGDAAPVLAPYGIIARHGEPADLKNFFILHEGAVQMADGELNEID 242

Query: 234 YSDIEKSSISNF--HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
           Y D E +         +N W G +D YW +  IP  ET F     +       YQ     
Sbjct: 243 YDDFEGAGNHTPLKVATNGWTGFTDHYWMTTLIPRGETGFDLST-FQDPRRNIYQTTVKQ 301

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
             IT+ PG++   T  LFAGAKE+ TI +Y+    + +F   IDWGWF+F+ KP+F L+ 
Sbjct: 302 PAITLEPGQTAEATTQLFAGAKEWETIRNYQNKGGVDKFLDSIDWGWFFFLTKPIFALLH 361

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           +    +GN G +I+  T+ +KL+  PLA K YVS A MK +QP++++++E+      Q L
Sbjct: 362 WLNQQIGNMGWSIIALTLIIKLVLLPLAYKSYVSMAKMKELQPQMEKIKERAGD-DRQAL 420

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
           QK M+ LYK   +NP +GC PILLQIP+FF++YKVI ++LE+RHAP+ GWI+DL+A DP+
Sbjct: 421 QKEMMALYKKEKVNPASGCLPILLQIPIFFSLYKVIFVTLELRHAPWIGWIRDLSAPDPS 480

Query: 472 NIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525
           +++ L+G+LP+  P        + +GI P+++ +SM++Q K++P P D  Q M+  WMP 
Sbjct: 481 SLYNLWGLLPWNAPEPGSLLALIFIGILPLLLGISMWLQQKLNPAPTDPTQKMVFAWMPW 540

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +F+F L SF +GL++YW  +N I+  QQ  IM+  G +  +   ++S F +   + 
Sbjct: 541 IFMFMLGSFASGLVVYWIANNTITFTQQYAIMRSQGYKPDVFGNIKSGFKRTRKTD 596


>gi|56695446|ref|YP_165794.1| putative inner membrane protein translocase component YidC
           [Ruegeria pomeroyi DSS-3]
 gi|81676422|sp|Q5LW11|OXAA_SILPO RecName: Full=Inner membrane protein oxaA
 gi|56677183|gb|AAV93849.1| inner membrane protein YidC, putative [Ruegeria pomeroyi DSS-3]
          Length = 609

 Score =  434 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 211/608 (34%), Positives = 336/608 (55%), Gaps = 31/608 (5%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYAA 55
           ++N N  +A ALS +++  W   +  P   E             +QT         +   
Sbjct: 3   DQNKNLILATALSFLVILVWFILFPPPEQTEAPATEIATTNGTAVQTPTAAATEGGAGEV 62

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
             +D  A   + +PRV++  P L GS++L G + D+L+L+ Y + +  ++ IV +L+P+ 
Sbjct: 63  PALDSAAPTQAEAPRVQIDTPRLKGSVSLLGGRIDELSLKDYRVSLDEDAEIVEMLTPAG 122

Query: 116 TKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
           + +AY+A   +   A  N  ++P   T W+L SG  L+  TP+ L + N + + F RT++
Sbjct: 123 STSAYYALYGWAPGAGLNAADVPGPLTEWSLESGDTLSVGTPVTLSWSNGSGVTFRRTLA 182

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV-----LGDKS 228
           +DE Y+F +  +V N S   I  +P G + RH      +  G++  FI       + D +
Sbjct: 183 VDEDYMFTVTQSVENGSAAPIGAAPYGILARHGIGEDADLPGLKNFFILHEGVVAMNDGT 242

Query: 229 LVEQKYSDIEKSSISNF---------HESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
           L E  Y D+ K  I            ++S+ W+G +D YW +  IP   T+F S  KY  
Sbjct: 243 LSEIDYKDVRKFDIDPNEGAQAEVFQNKSDGWIGFTDHYWMATLIPGSGTAFKSAAKY-D 301

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
                YQA+     +++ PG+S   T  LFAGAKE+ +I  Y++D  + +F   IDWGWF
Sbjct: 302 ARRKIYQAETVLPTMSVAPGESAEVTTRLFAGAKEWESIRAYQQD-GVQKFLDSIDWGWF 360

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +F+ KP+F L+     L+GN G +I+  T+ +K + FPLA K YVS A MK +QP+++ L
Sbjct: 361 FFLTKPIFWLLHQINGLIGNMGWSIIGLTLIIKAIVFPLALKSYVSMAKMKELQPQMEAL 420

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +E       Q +Q+ M++LYK   +NP AGC PILLQIP+FF++YKVI +++E+R AP++
Sbjct: 421 KEAAGD-DRQKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRQAPWF 479

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL------SMFIQMKMSPPPAD 513
           G  +DL+  DPT+I   FG LP+  P    +    +I  L      SM++Q K++P P D
Sbjct: 480 GPFRDLSMPDPTSIMNFFGWLPWAGPEAGSLTATILIGILPLLLGISMWLQQKLNPAPTD 539

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
             QAMI  WMP VF+F L SF +GL++YW  +N I+  QQ +IM+ HG +  +   ++S 
Sbjct: 540 PTQAMIFAWMPWVFMFMLGSFASGLVVYWIANNTITFTQQYIIMRSHGYKPDVFGNIKSG 599

Query: 574 FSKNYNSQ 581
           F++   + 
Sbjct: 600 FARRAKAD 607


>gi|149913108|ref|ZP_01901642.1| 60 kDa inner membrane insertion protein [Roseobacter sp. AzwK-3b]
 gi|149813514|gb|EDM73340.1| 60 kDa inner membrane insertion protein [Roseobacter sp. AzwK-3b]
          Length = 604

 Score =  434 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 211/603 (34%), Positives = 327/603 (54%), Gaps = 26/603 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN-------SYA 54
           ++N N  +A ALS +++  W   +  P   + +       +    +           + A
Sbjct: 3   DQNKNLILATALSFVVILVWFVLFPPPEPPQQDATTPEAASQVDGSATAPLTATAPATGA 62

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
                        +PRV +  PSL GSI+LKG + D L+L+ Y   +   S  VTLLSP 
Sbjct: 63  TAGTPAPEAEEPEAPRVAISTPSLDGSISLKGGRIDQLSLKNYRETLEPGSDTVTLLSPI 122

Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
            T +AY+A   +          +P +NTVW + SG  L+P TP+ LV+ N   + F R I
Sbjct: 123 GTDSAYYALFGWAPGQGLTAETVPGANTVWKVESGDQLSPETPVTLVWDNQQGLTFRREI 182

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
           S+D+ ++F +  +V N   D    +P G + RH        F +       + D  L E 
Sbjct: 183 SVDDKFMFTVTQSVENTGADTPSLAPYGILARHGEPVDLKNFFILHEGGIRMVDGQLSEI 242

Query: 233 KYSDIEKS--SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
            Y D E +    +     + W G +D YW +  IPS   +  + F+        YQ    
Sbjct: 243 DYDDFEPASNHETLTVNESGWTGFTDHYWMTTLIPSMAGAQVTTFQ--DTRRNIYQTTVR 300

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
            N  T+ PG+S T T  LFAGAKE+ TI +Y+ +  I RF   IDWGWF+F+ KP+F ++
Sbjct: 301 KNTETVAPGQSATVTTRLFAGAKEWETIRNYQNEDGIDRFLDSIDWGWFFFLTKPIFAVL 360

Query: 351 SYF------YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
            +         + G+ G AI+  T+ +K L  PLA K YVS A MK +QP++++++E   
Sbjct: 361 HWLNVTLAGMGIAGSMGWAIIGLTLLIKALLLPLAYKSYVSMAKMKELQPQMEKIKE-SA 419

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
            +  Q LQK MI+LYK   +NP +GC PILLQIP+FF++YKVI ++LE+RHAP+ GWI D
Sbjct: 420 GNDRQKLQKEMIELYKKEKVNPASGCLPILLQIPIFFSLYKVIFVTLELRHAPWIGWIDD 479

Query: 465 LAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           L+A DP++++ L+GILP+  P        + +GI P+++ +SM++Q K++P P D  Q M
Sbjct: 480 LSAPDPSSLYNLWGILPWAAPEPGSIIALIFIGILPLLLGISMWLQQKLNPAPTDPTQQM 539

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           I  WMP VF+F L SF +GL++YW  +N+I+  QQ +IM+  G +  ++  + S+  +  
Sbjct: 540 IFAWMPWVFMFMLGSFASGLVVYWIANNMITFAQQYLIMRSQGYKPDVLGNILSSMKRKP 599

Query: 579 NSQ 581
            ++
Sbjct: 600 KTE 602


>gi|254450534|ref|ZP_05063971.1| 60 kD inner-membrane protein [Octadecabacter antarcticus 238]
 gi|198264940|gb|EDY89210.1| 60 kD inner-membrane protein [Octadecabacter antarcticus 238]
          Length = 593

 Score =  433 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 199/595 (33%), Positives = 320/595 (53%), Gaps = 21/595 (3%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ-------TVKQPNQVDNSYA 54
           ++N N  +A ALS I++  W   +  P + E     +             Q  +     A
Sbjct: 3   DQNKNIILATALSFIVILTWFVLFPPPEVAEQAPTTEITTTDGTTLGVDAQIPEQVGEVA 62

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
            +        ++ +PR+ + + SL GS++L G + DDL+L+GY   +  ++ +V LLSP 
Sbjct: 63  VLAPLSAEDVIADAPRLVIDSESLTGSLSLTGGRIDDLSLKGYRETLKPDADLVRLLSPI 122

Query: 115 NTKNAYFAELDYVST--ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
            T + Y+A   +V+   A   ++P ++T W + SG+ L+P + + LV+ N   + F +T 
Sbjct: 123 GTDSPYYALHGWVAAVGATADQVPGASTQWQIESGETLSPGSDVTLVWGNGAGLTFRKTF 182

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV-- 230
           ++DE +LF +  TV N +  +I   P G + RH        F   EG + +         
Sbjct: 183 AVDEEFLFTVTQTVENTTGAEIALRPYGLVARHGEPDQIGFFIQHEGVVRMSDGSMEEIN 242

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
                D+           N W+G SD+YW +  IP+    F S  K+ +D    YQ +  
Sbjct: 243 YDDMPDLTTEESRIEVTENGWIGFSDQYWMTALIPTPGRDFRSTAKFAND---IYQIETV 299

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
              IT+ PG + +     FAGA+E+  I  Y+ DL I RF   IDWGWF+F+ KP+F ++
Sbjct: 300 YPMITVAPGATASADTQFFAGAQEWEVIRSYQNDLGIDRFLDSIDWGWFFFLTKPIFAML 359

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
            +   L+GN G +I+  T  +K L  PLA K YVS A M+ +QP++ +L+E       + 
Sbjct: 360 HWLNGLIGNMGWSIICLTFVIKALLLPLAYKSYVSMAKMRELQPEMAKLKEAAGDDREK- 418

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           LQK M+ LYK + +NP +GC PIL+QIP+FF++YKVI +++E+RHAP+ GW+ DL+A D 
Sbjct: 419 LQKGMMSLYKENKVNPASGCLPILMQIPIFFSLYKVIFVTIELRHAPWIGWVNDLSAPDT 478

Query: 471 TNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           + ++ LFG+LP+  P          +G+ PI++ +SM++Q K++P P D  Q MI  WMP
Sbjct: 479 STLYNLFGLLPWGAPEPDSILALAFIGVMPIVLGISMWLQQKLNPAPTDATQKMIFAWMP 538

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
            VF+F L  F +GL++YW  +N I+ +QQ  IM+  G +  L   +      +  
Sbjct: 539 WVFMFMLGGFASGLVLYWIANNSITFMQQYAIMRSQGFKPDLFGNITGRKKPDPE 593


>gi|300024925|ref|YP_003757536.1| membrane protein insertase, YidC/Oxa1 family [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299526746|gb|ADJ25215.1| membrane protein insertase, YidC/Oxa1 family [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 624

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 243/603 (40%), Positives = 354/603 (58%), Gaps = 31/603 (5%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------------------EMNNERKN 39
              N   A+ALS++++  WQ F+  P ++                         N     
Sbjct: 9   DQNNLMFAVALSILVLMGWQYFFARPELQNEHARQEFNKKIEAQNKDGSSETPPNVASTP 68

Query: 40  IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99
           +              A     R  AL  S R++++ PSL GSI+LKG + DDL L  Y  
Sbjct: 69  VAPPSTDAPTGAQAPATAPVSREAALQGSQRLKIETPSLEGSIDLKGGRLDDLVLMKYRE 128

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANN-IELPNSNTVWNLISGKILTPTTPIKL 158
            V  NS  V LLSPS +   YFAE  +V  + + +++P  +++W + SG  LTP TP+ L
Sbjct: 129 TVDPNSARVILLSPSGSPEPYFAEYGWVPQSGSAVKVPTRDSLWTVESGTRLTPETPVTL 188

Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218
           ++ N   ++F RT+S+D  Y+FKI D + N +  ++   P  R+ R     +   + + E
Sbjct: 189 MWDNGGGLVFHRTVSVDNDYMFKIKDEIENKTQAEVTLLPYARVHRSGHPPSQAFYVLHE 248

Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESN--SWLGISDKYWASVFIPSKETSFHSQFK 276
           G + V GD  L E  ++D  KS +    ++    WLGI+DKYWA+  +P +   + + + 
Sbjct: 249 GLVGVSGDHGLQEFTFADALKSGVPTTFDNVTGGWLGITDKYWATALVPEQSEPYRAMYS 308

Query: 277 Y----LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
                   G   +Q  +    +++  G        LFAGAK+   I  YE  L I RF+ 
Sbjct: 309 ALKARDPAGKDAFQTDYLRGALSVPAGLRKGVEGHLFAGAKQASLIDGYENALGILRFDR 368

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           +IDWGWFYFI +P+F LM +   LV NFGI I++ TV VK  F+PLA KQY S A MK +
Sbjct: 369 MIDWGWFYFITRPLFRLMEFINGLVHNFGITILILTVLVKAAFYPLANKQYESMARMKKL 428

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QP++  ++E++K    Q  QK + +LY+T  INPLAGCWPILLQIPVFFA+YKV+ ++++
Sbjct: 429 QPEMQRIKEQYKD-DTQRQQKEIFELYRTQKINPLAGCWPILLQIPVFFALYKVLFVTID 487

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           MRHAPF+GWI DL+A DPT++F LFG+LPF  P F+H+G+WP+IM ++M++QM+++PP  
Sbjct: 488 MRHAPFFGWIHDLSAPDPTSLFNLFGLLPFDSPTFLHIGVWPLIMGVTMWMQMQLNPPQP 547

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  Q  I  WMPVVF F L+SFPAGL+IYW+WSN +SI+QQ  I K +GAE+ L+D ++ 
Sbjct: 548 DPIQQQIFQWMPVVFTFMLASFPAGLVIYWAWSNTLSILQQVRINKKNGAEVHLLDNIKR 607

Query: 573 TFS 575
           TF 
Sbjct: 608 TFR 610


>gi|315122061|ref|YP_004062550.1| putative inner membrane protein translocase component YidC
           [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313495463|gb|ADR52062.1| putative inner membrane protein translocase component YidC
           [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 578

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 442/581 (76%), Positives = 499/581 (85%), Gaps = 3/581 (0%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME+NWNYF AIA+SV IVY WQ  YV PRIE +   +K   T+++ +        V ID+
Sbjct: 1   MEKNWNYFAAIAISVAIVYVWQLVYVQPRIEAIKEGKKTPLTIEKQSI---QNTIVPIDN 57

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           RAQALS SPRVE+ +PSL GSINLKGAQFDDL+L+GY +DVS NSP+V LL+P NT+NAY
Sbjct: 58  RAQALSRSPRVEINSPSLAGSINLKGAQFDDLSLKGYRVDVSRNSPMVALLNPLNTENAY 117

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
           FAEL+Y+ST N    PN NTVWNL+SG++LTP++PIKL FK+ANNILFER ISLDE+YLF
Sbjct: 118 FAELNYISTTNTTVFPNENTVWNLVSGQVLTPSSPIKLAFKSANNILFERIISLDENYLF 177

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
            IVDT+TNN  + I FSP G+I R+K Q  +N+FGVQEGFIAVLGD+SL+E+KYSDIEKS
Sbjct: 178 TIVDTITNNGTNLISFSPYGKITRYKLQKESNSFGVQEGFIAVLGDQSLIEKKYSDIEKS 237

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
           S+SNFHESNSWLGISDKYWAS FIP KE SF S+F Y SDG ARYQA F  NEI + PGK
Sbjct: 238 SVSNFHESNSWLGISDKYWASAFIPPKEKSFQSRFDYFSDGRARYQANFKINEIILSPGK 297

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
           S  TTN LF GAKE P I HYEK+L IPRFEMLIDWGWFYFIAKPMF LMSYFYNLVGNF
Sbjct: 298 STKTTNSLFVGAKELPIIQHYEKELEIPRFEMLIDWGWFYFIAKPMFALMSYFYNLVGNF 357

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           GIAIMLTT+FVK LFFPLAKKQYVSTANMKNIQPKID LREKFKQ+ PQVLQK M+QLYK
Sbjct: 358 GIAIMLTTIFVKALFFPLAKKQYVSTANMKNIQPKIDALREKFKQASPQVLQKEMLQLYK 417

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
           TH INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF+GWI+DLAA DPTNIFTLFGIL
Sbjct: 418 THKINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFFGWIQDLAAPDPTNIFTLFGIL 477

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
           PF LP F+HVGIWPIIMSLSMF+Q+KMSPPP DKGQA++LNWMPVVFVFALSSFPAGLII
Sbjct: 478 PFQLPEFIHVGIWPIIMSLSMFLQLKMSPPPTDKGQAIVLNWMPVVFVFALSSFPAGLII 537

Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           YWSWSN+ISI+QQ VIMKM+GA+I +IDRLRS F+K+ NS+
Sbjct: 538 YWSWSNIISIIQQTVIMKMYGAKIDIIDRLRSMFAKSSNSK 578


>gi|288957364|ref|YP_003447705.1| preprotein translocase YidC subunit [Azospirillum sp. B510]
 gi|288909672|dbj|BAI71161.1| preprotein translocase YidC subunit [Azospirillum sp. B510]
          Length = 577

 Score =  430 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 216/579 (37%), Positives = 324/579 (55%), Gaps = 19/579 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE---------------EMNNERKNIQTVKQ 45
           M    N  +AIALS+ I+  +Q FY  PR+E                +      +     
Sbjct: 1   MTDQRNLIIAIALSIAILLGFQYFYEKPRVEQQKQLAAQQAAQTEQSVPVPAPGVPAQLP 60

Query: 46  PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
                   A       A+ ++   RV++  P+L GS+NL G + DDL L  YH      S
Sbjct: 61  SGMSTAEVAKERPVLLAEQMAAGTRVKIDTPALHGSVNLVGGRIDDLTLAQYHETPDPKS 120

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
           P + LL+P+ T  AY+AE  +V     +  P + T W    G  LTP  P+ L + N   
Sbjct: 121 PEIVLLAPAGTPAAYYAEFGWVPQGAGVATPTATTRWT-ADGAALTPEKPLTLSWDNGQG 179

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           ++FER I++D  ++F +  TV N     +   P   + R      +  + + EG + V  
Sbjct: 180 LVFERKIAVDPDFMFTVTQTVRNTGAAPVTLLPYSLVSRSGTPHTSGYYILHEGPLGVFN 239

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHAR 284
             SL E+KY D+ K+       +  W+GI+DKYW    +P       ++F Y       R
Sbjct: 240 -GSLTEEKYDDVRKAGSIAKDTTGGWIGITDKYWLVSLVPDPSEKVTARFLYNQVANADR 298

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           YQ       +T+ PG S   T  LFAGAK+   +  Y + L I  F++ ID+GWFYF+ K
Sbjct: 299 YQTDTMGAPVTVAPGASAENTGRLFAGAKQVKLLDGYSEKLNIKNFDLAIDFGWFYFLTK 358

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P F  + +   ++GNFGIAI++ TV VK +FFPLA K Y + + MK +QPK+ ELREKF 
Sbjct: 359 PFFYALDFLGRIIGNFGIAILVLTVCVKAVFFPLANKSYQAMSKMKALQPKMQELREKFS 418

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                 + + ++ LYK   ++P++GC PI++QIPVFF++YKV+ +++EMRHAPF+GWI D
Sbjct: 419 D-DQARMNQELMALYKREKVSPVSGCLPIVIQIPVFFSLYKVLFVTIEMRHAPFFGWIHD 477

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L++ DPT IF LFG++P+  P  +H+G+WP+IM ++M+ Q KM+P P D  QA +  ++P
Sbjct: 478 LSSPDPTTIFNLFGLIPWDPPAMLHLGLWPLIMGVTMWFQQKMNPAPPDPVQAKVFQFLP 537

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           +VF F L+ FPAGL+IYW+W+N +S++QQ  IMK  G +
Sbjct: 538 IVFTFMLAGFPAGLVIYWAWNNTLSVLQQWTIMKRMGVK 576


>gi|315498839|ref|YP_004087643.1| membrane protein insertase, yidc/oxa1 family [Asticcacaulis
           excentricus CB 48]
 gi|315416851|gb|ADU13492.1| membrane protein insertase, YidC/Oxa1 family [Asticcacaulis
           excentricus CB 48]
          Length = 658

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 216/610 (35%), Positives = 349/610 (57%), Gaps = 32/610 (5%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE---RKNIQTVKQPNQVDNSYAAVLI 58
           + N N F+ +ALS+ I++ +Q F   P++E+       +K I+  K P     S      
Sbjct: 4   DDNRNMFIFLALSMAILFGYQFFVAGPQMEKERAAAMAQKKIEAAKSPVATPESLFVEGK 63

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
             R QA++ +PRV + +P+L GS++L GA+ DDL L+ Y   + ++SP V L  P   ++
Sbjct: 64  LPRDQAVAATPRVAIDSPALKGSLSLAGARIDDLFLKQYKETLKADSPNVELFRPQGAEH 123

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
           AY+AE  +V  AN   LP+ N+VW ++SG +L+P   + L +     + FER +SLD+ Y
Sbjct: 124 AYYAESGWVG-ANVPGLPSGNSVWTVVSGSVLSPGKDVVLGYDAGTGLRFERRLSLDDKY 182

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGD------KSLVE 231
           +  + DTV N +   +  +P   ++R   P+T      + EG I            +  E
Sbjct: 183 MITVTDTVVNTTGAAVTLAPYANVVRQGAPETLGKNMILHEGGIGAFSKDATGKGYTTPE 242

Query: 232 QKYSDIEKSSISNFHE---SNSWLGISDKYWASVFIPSKETSFHSQFKYLS-------DG 281
            K+ + EK       +   +  W+G++DKYW +  IP ++   H+  K          D 
Sbjct: 243 FKFHNWEKDEKKANFKADSTGGWMGLTDKYWLAAVIPDQKAKIHASMKATDQTTANEKDF 302

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
           +  YQA + A+ +T+ PGK ++ T  +FAGAK+   +  Y+  L +P F+  IDWG F+F
Sbjct: 303 NFLYQAGYVADAVTVQPGKPVSVTYHIFAGAKQASLLAAYQDKLKLPAFDKAIDWGMFWF 362

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
             +PMF ++ + +  VGNFG+AI+  TV VKL+FFPLA K Y S   MK +QP+++EL++
Sbjct: 363 FTRPMFFVLDFLFKYVGNFGLAILGLTVLVKLIFFPLAHKSYESMTKMKMLQPQVEELKK 422

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           K + +P Q+    M+ LY+   +NP++GC PI +Q+PVF+A+YKV+ +++EMRHAPF+GW
Sbjct: 423 KHEGNPQQMQI-EMMGLYQKEKVNPMSGCLPIFVQMPVFYALYKVLFVTIEMRHAPFFGW 481

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGF----------MHVGIWPIIMSLSMFIQMKMSPPP 511
           I+DL+  DPT +F LFG+LP+               +H+GI P++   SM++   M+PP 
Sbjct: 482 IQDLSDKDPTTMFNLFGLLPYDPAALPVIGGLMATSLHIGILPLLYGASMWLSQSMNPPM 541

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
            D  Q  I  +MPV+F F ++ F +GL+IYW W+NV+++ QQ ++M+  G E  +   L 
Sbjct: 542 PDPMQRKIFAFMPVMFTFIMAPFASGLLIYWIWNNVLTVAQQYMLMRQMGVENPIDTLLG 601

Query: 572 STFSKNYNSQ 581
                   S+
Sbjct: 602 KVAKTKPKSE 611


>gi|323137577|ref|ZP_08072654.1| membrane protein insertase, YidC/Oxa1 family [Methylocystis sp.
           ATCC 49242]
 gi|322397203|gb|EFX99727.1| membrane protein insertase, YidC/Oxa1 family [Methylocystis sp.
           ATCC 49242]
          Length = 591

 Score =  429 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 237/591 (40%), Positives = 345/591 (58%), Gaps = 17/591 (2%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID-- 59
           E   N  +A ALS+I +  W  FY +P +++        + + +  ++     A      
Sbjct: 3   ENTKNMLLAAALSLIFIGLWDYFYAFPEMDKQKKALSEQERMAKIPKLGAPEKAAAAAKP 62

Query: 60  ---DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
               R  AL++SPRV +   S+ GSI LKGA+ DD++L+ YH  V   SPI+TLLSP   
Sbjct: 63  VVRSREAALALSPRVAIDTKSISGSIALKGARVDDVSLKNYHQTVDPRSPIITLLSPEEG 122

Query: 117 KNAYFAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
              Y+AEL Y+S    N  +  +           LT + P+ L + N   ++F+R IS+D
Sbjct: 123 PEPYYAELGYLSAETENAPVLPNTETLWTADADKLTTSQPVTLSWDNGQGLVFKRVISID 182

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
           + YL  + D+V N     +      R+ R     +     + EGF+ V+GD    E  Y 
Sbjct: 183 DEYLLTVKDSVENKGGKPVTLYSYSRVSRVGHPPSAGYAALHEGFVGVIGDTG-QELTYD 241

Query: 236 DIEKSSI--SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQAKFSAN 292
            IEK       F     W+G +DKYW +V  P +     +++  +  G  + YQA   + 
Sbjct: 242 KIEKEPNATKTFKGVGGWVGFTDKYWGAVVAPDQNAPMEARYMLMGGGPVKTYQADTVSE 301

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
             T+ P  S  TT ++FAGAKE  T+  Y+ +  + RF++LIDWGWFYFI +PMF L+ +
Sbjct: 302 PKTLEPNASTATTTYVFAGAKEVDTLDAYKANPGLKRFDLLIDWGWFYFITRPMFRLIDF 361

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
            Y ++GNFG+AI+  TV VK  F PLA K Y S A MK IQPKI EL+EK+     +   
Sbjct: 362 LYRVLGNFGLAILAVTVIVKAAFLPLANKSYKSIAKMKEIQPKIKELKEKYGDDKHK-FN 420

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
              ++LYK   +NP +GC P+LLQIPVFF++YKV+ +++EMRHAPF+GWIKDL+A DPTN
Sbjct: 421 MEQMELYKREKVNPASGCLPVLLQIPVFFSLYKVLVVTIEMRHAPFFGWIKDLSAPDPTN 480

Query: 473 IFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
           +F LFG++P+          ++ +G+WP++M ++M++QMKM+P P D+ Q  +  WMPV+
Sbjct: 481 VFNLFGLIPWDPTHVAIFGPYLALGVWPLVMGVTMWLQMKMNPEPTDEIQKTMFAWMPVM 540

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           F F + SF +GLIIYWSW+N++SIVQQ VIMK  G +  L D LR TFS+ 
Sbjct: 541 FTFTMGSFASGLIIYWSWNNLLSIVQQGVIMKRAGVKFELWDNLRKTFSRA 591


>gi|40062654|gb|AAR37575.1| inner membrane protein, 60 kDa [uncultured marine bacterium 313]
          Length = 560

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 206/565 (36%), Positives = 327/565 (57%), Gaps = 8/565 (1%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  +AI LS +++  W  F+  P +E    E +  ++ +  +            +
Sbjct: 1   MDF-KNVLIAIVLSTLVLVFWATFFEPPPVERQIVEDQITKSEEPSSPSIEKVELSKKIE 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           R  A+    RV+++N ++ GSI+L+GA  DD+  + Y   + S+   V  L+P ++   Y
Sbjct: 60  RNDAIDSVARVKIENNNIKGSISLQGAIIDDIIFKNYKESLESDQK-VIFLNPKSSDEGY 118

Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           + E  + S +N  ++LP  NT+W +   K+LTP  PI L + N   ++F + I LD+ YL
Sbjct: 119 YIETGWASNSNEKLKLPLDNTIWKVKGNKVLTPNNPIVLEWDNNEGLIFTKKIELDDKYL 178

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           FKI   + N S     F P  +I R+        + + EGFI +  D  L E+ Y D+E 
Sbjct: 179 FKISQGIKNTSNKSYEFFPYAQITRNYKPDVIPIYILHEGFIGMFDD-ELKEEDYKDVED 237

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
                 + S  WLGI+DKYW +  +P K   F S+F  +   +             +   
Sbjct: 238 EKFI-INSSKGWLGITDKYWLTAIVPEKGKKFKSEFLSIDGKYKANFI--IKEPTVLSSN 294

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359
            SIT     F  AKE   I  Y + L+I +F++ IDWGWFYFI KP+F ++ YF+ L GN
Sbjct: 295 ASITNEINAFVMAKEVAVIDGYAERLSIEKFDLTIDWGWFYFITKPLFFVIEYFFKLTGN 354

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           FG+AI++ T  V+++FFPL+   + S A MK +QP++  L+E  K    + LQ+ M+ LY
Sbjct: 355 FGVAIIILTALVRIVFFPLSNYSFRSMAKMKILQPEMIRLKELHKDDKTK-LQQEMMALY 413

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           K   +NP++GC P+L+QIP FFA+YK++ +++EMR  PF+GWI+DL+A DPT+IF LFG+
Sbjct: 414 KREKVNPISGCLPVLIQIPFFFAVYKMLYVTIEMRQQPFFGWIQDLSARDPTSIFNLFGL 473

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539
           +P+  P F+ +G+WPI+M L+MF+Q K++P P D  QA I  ++P+     L+ FP+GL+
Sbjct: 474 IPWDPPTFLMIGVWPILMGLTMFLQQKLNPTPPDPMQAKIFMFLPIFLTIILAPFPSGLV 533

Query: 540 IYWSWSNVISIVQQAVIMKMHGAEI 564
           +YW+ SNV+++ QQ VI++    + 
Sbjct: 534 VYWTISNVLTMAQQWVIIRGTKVKT 558


>gi|114327390|ref|YP_744547.1| 60 kDa inner membrane protein YIDC [Granulibacter bethesdensis
           CGDNIH1]
 gi|122327634|sp|Q0BU78|OXAA_GRABC RecName: Full=Inner membrane protein oxaA
 gi|114315564|gb|ABI61624.1| 60 kDa inner membrane protein YIDC [Granulibacter bethesdensis
           CGDNIH1]
          Length = 578

 Score =  428 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 212/581 (36%), Positives = 315/581 (54%), Gaps = 15/581 (2%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK-QPNQVDNSYAAVLIDD 60
                 F+AIA+S+ I+  +Q  Y +   E     R      + +PN    +        
Sbjct: 1   MDQKRLFLAIAISLGILLGFQGLYRHFVPEPPAAARTATNAGQGKPNNTLGAVPTDATAS 60

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           ++       R+ +  P + GSI+L GA+FDDL LR YH  V  NSP+V LL+P +    Y
Sbjct: 61  QSPPPKEGARLAVDAPRVKGSISLVGARFDDLVLRDYHETVDKNSPLVRLLAPLSGDEPY 120

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
           + E  +V   + I  P  +T W       LTP  P+ L + N   + F   +++D  Y+F
Sbjct: 121 YVEYGWVPEESGIATPGRDTEWK-ADAATLTPNKPVTLSWDNGAGLTFMLKVAVDADYMF 179

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
            +  +V N +   +   P  R+ R           + EG I V+    L E  Y   +  
Sbjct: 180 SVTQSVRNTTGKPVVLHPYARVRRDYRPEVEGYTVLHEGLIGVVDGI-LHEITYKSADSD 238

Query: 241 SISN------FHESNSWLGISDKYWASVFIPSKETSFHSQFK-YLSDGHARYQAKFSANE 293
              N         +  W GI+DKYW +  IP + TS    F+    +G   YQ    ++ 
Sbjct: 239 GAKNNGLAFEHASTGGWAGITDKYWLTALIPDQITSVDFSFRDTKPNGRDGYQVGIISHN 298

Query: 294 ITI-LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
                 G    +T  LFAGAK    + HY+ +  IP F   +D+GWF+FI +P F  + +
Sbjct: 299 PDQVAAGAESASTTHLFAGAKVVSLLDHYQAEYHIPSFWEAVDFGWFWFITRPFFYALDW 358

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
            Y+LVGNFG+AI++ TV VK  F+PLA K Y S + M+ + PKI  LRE++K   P  +Q
Sbjct: 359 LYHLVGNFGVAILIFTVLVKAAFYPLASKSYRSMSKMRLLAPKIQSLRERYKD-DPTRMQ 417

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           + ++QLYK    NP +GC P+LLQ P+FF++YKVI +++EMRHAPF+GWI DL+A DPTN
Sbjct: 418 QEVMQLYKAEGANPASGCLPMLLQFPIFFSLYKVIFVTIEMRHAPFFGWIHDLSAVDPTN 477

Query: 473 IFTLFGILPFYL---PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529
           +F LFG+LPF       F+H+GIWP+IM  +M++Q KM+PP  D  QA +  +MP++F F
Sbjct: 478 LFNLFGLLPFDPTHISPFLHLGIWPLIMGGTMYLQQKMNPPMPDPVQARMFQFMPIIFTF 537

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
            L+ FP GL+IYWSW+N++SI QQ +I +        + ++
Sbjct: 538 MLARFPVGLVIYWSWNNLLSIGQQWLIQRRTKLPRPELAKV 578


>gi|163868925|ref|YP_001610152.1| putative inner membrane protein translocase component YidC
           [Bartonella tribocorum CIP 105476]
 gi|161018599|emb|CAK02157.1| translocase precursor subunit [Bartonella tribocorum CIP 105476]
          Length = 620

 Score =  427 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 252/612 (41%), Positives = 366/612 (59%), Gaps = 32/612 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE--------------------MNNERKNI 40
           ME N N+F+AI LS +++ AWQ  +V P+  +                     +      
Sbjct: 1   MEYNRNFFIAIGLSFLVLIAWQFLHVAPKQAKLQNQQAITQQQQLSKQQSPLSSATVNFS 60

Query: 41  QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
                          +  + R   L+ + R+ +K   L GSINL GAQFDDL+L+ Y + 
Sbjct: 61  DDTSTHPSTSIIEQPMTPEVRKAVLAKTERIAIKTNELEGSINLVGAQFDDLHLKKYRVT 120

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKIL-TPTTPIKL 158
           V   SP + LL+P   K  Y AE  + S +   + LP  +T W +       TP+TPI L
Sbjct: 121 VDKKSPEIDLLNPKGFKTTYLAEFGFASASLPAKALPQPDTQWQIEGNNTTLTPSTPITL 180

Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218
           ++ N    +F RT+ +D++Y+F I D+++N S   I  S   R+ R  P   TN   +  
Sbjct: 181 IYNNGQGQIFRRTLFVDDYYMFTIEDSISNESDQPIYLSSYARVARAAPPEHTNATYLLH 240

Query: 219 GFIAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269
             +  +   SL  +KY          D  + S++    +  W+GI+DKYWA   IP ++ 
Sbjct: 241 EGMIGIAGDSLKTEKYKTLAELDPNPDNGQKSMTFSKVTGGWIGITDKYWAVAVIPQQDK 300

Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329
            + S+F Y       YQ+    + +TI P ++ T TN LFAGAK+   I+HY+ +L I +
Sbjct: 301 EYTSRFIYFDRLQTHYQSDLLGSLLTIAPNETKTVTNHLFAGAKQVEIINHYQNNLKINK 360

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F +LIDWGWF FI KPMF L+   Y   GNFGIAI+L TV +K+L FPLA K Y S A M
Sbjct: 361 FALLIDWGWFDFITKPMFALIDILYKQTGNFGIAILLVTVLLKILLFPLANKSYQSMARM 420

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           K +QP++ E++EK+     +  Q+A+I+LYKT  INPLAGCWP+L+Q P+FFA+YKV+ I
Sbjct: 421 KLLQPRLLEIKEKYPDDKNK-QQQAIIELYKTEKINPLAGCWPMLVQFPIFFALYKVLYI 479

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           ++EMRHAPF+GWI+DLAA DPT++F LFG+LP+  P F+ +G WP+IM ++MF+QM+M+P
Sbjct: 480 TIEMRHAPFFGWIQDLAAPDPTSLFNLFGLLPYTTPAFLMIGAWPLIMGITMFLQMRMNP 539

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            P D+ QAMI  WMPVVF F L+SFP GL+IYW+W+N++SI+QQ ++MK  GA+I L D 
Sbjct: 540 APQDQTQAMIFTWMPVVFTFMLASFPVGLVIYWAWNNILSIIQQGIMMKRQGAKIELFDN 599

Query: 570 LRSTFSKNYNSQ 581
           L++ + K+   +
Sbjct: 600 LKTMWKKSPKKE 611


>gi|296444656|ref|ZP_06886620.1| membrane protein insertase, YidC/Oxa1 family [Methylosinus
           trichosporium OB3b]
 gi|296257924|gb|EFH04987.1| membrane protein insertase, YidC/Oxa1 family [Methylosinus
           trichosporium OB3b]
          Length = 610

 Score =  427 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 234/613 (38%), Positives = 346/613 (56%), Gaps = 37/613 (6%)

Query: 1   MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA---- 55
           M     N  +A  LS++ + AW  FY +P++E+    +          Q   +       
Sbjct: 1   MNEYTKNVIIAAGLSMLFIGAWDYFYAFPKLEQERQTQAEQIKKTAQAQAPAARKPAAPE 60

Query: 56  -------------------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96
                               +   R  AL+ SPR+ +  PS+ GSI L G + DD++L+ 
Sbjct: 61  TKQAQAPTATQQQPAAAQKPVKKTREAALAESPRIAIDTPSIAGSIALVGGRIDDVSLKN 120

Query: 97  YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156
           YH  V   SPI+ LLSP N  + Y+AE  +   A +  LPN+ T+W       L+   P+
Sbjct: 121 YHETVDPKSPIIVLLSPENGPDPYYAETGF-LAAGDAALPNAQTLWT-ADRTTLSAAQPV 178

Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216
            L + N   ++F+R I++D+ Y+F + D+V N++   +      R+ R           +
Sbjct: 179 TLSYDNGQGLVFKRKIAVDDRYMFTVADSVENHADKPVTLYSYMRVARVGIPAGAGYAAL 238

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN--SWLGISDKYWASVFIPSKETSFHSQ 274
            EGFI V+G+  + E KY  +EK   +    S    WLG ++KYWA+V +P ++  F ++
Sbjct: 239 HEGFIGVIGESGVQEMKYEKVEKEPHATKTLSGTGGWLGFTEKYWAAVAVPQQDKPFEAR 298

Query: 275 FKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
           F     G  + YQA      +TI PG S  T+  +FAGAK    +  Y+    I  F++L
Sbjct: 299 FSATGAGTVKAYQADTVGAPLTIQPGASGETSQRIFAGAKVVDMLDAYQAQ-GIEHFDLL 357

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           IDWGWFYF+ +PMF L+   ++++GNFG+AI+  TV VK+ F PLA K Y + A MK +Q
Sbjct: 358 IDWGWFYFLTRPMFRLIDNLFHVLGNFGLAILAVTVLVKIAFLPLANKSYQAVAKMKEVQ 417

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           PKI  L+EK+     Q L +  + L+K   INP  GC P+LLQIPVFF++YKV+ I++EM
Sbjct: 418 PKIQALKEKYGDDK-QTLSREQMALFKREKINPAGGCLPMLLQIPVFFSLYKVLVITIEM 476

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKM 507
           RHAPF+GWIKDL+A DPTNIF LFG++PF          F+ +G+WPIIM  +M++QMKM
Sbjct: 477 RHAPFYGWIKDLSAPDPTNIFNLFGLIPFDPTQIPLFGSFLWLGVWPIIMGFTMWMQMKM 536

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
           +P P D+ Q +   WMPV+F F+L SF +GL+IYWSW+N++S+ QQ  IM+  G +  L 
Sbjct: 537 NPEPTDEIQRIAFAWMPVIFTFSLGSFASGLVIYWSWNNILSVTQQWYIMRRAGVKFELW 596

Query: 568 DRLRSTFSKNYNS 580
           D L+ TF     +
Sbjct: 597 DNLKKTFDFKKKA 609


>gi|49475954|ref|YP_033995.1| putative inner membrane protein translocase component YidC
           [Bartonella henselae str. Houston-1]
 gi|49238762|emb|CAF28023.1| hypothetical protein BH12410 [Bartonella henselae str. Houston-1]
          Length = 612

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 259/610 (42%), Positives = 370/610 (60%), Gaps = 30/610 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME N N+F+AI LS  ++ AW  FYV P+  E+  ++   Q + +     +S  A   D 
Sbjct: 1   MEYNRNFFIAIGLSFGVLIAWHFFYVAPKQTELQQKQLIAQQLLKQQSAVSSPTANFSDS 60

Query: 61  ------------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
                             R   L+ + RV +K   L GSINL GAQFDDL L+ Y L V 
Sbjct: 61  ASTHESALIINHPMSPEIRDAELAKTNRVAIKTNELEGSINLVGAQFDDLLLKKYRLTVD 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKIL-TPTTPIKLVF 160
             S  + LL+P   K  Y AE  + S++ +   LP S+T W++       TP+TP+ L++
Sbjct: 121 KKSSEIALLNPKGFKETYLAEFGFTSSSLSKDALPQSDTRWHIEGNNTTLTPSTPVTLIY 180

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
            N     F R +S+D+HY+F I D++TN S   I  S   R+ R  P   TN   +    
Sbjct: 181 NNGQGQTFRRILSIDDHYMFTIEDSITNESDKPIYLSSYARVARAAPPEHTNATYLLHEG 240

Query: 221 IAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
           +  +   SL  +KY          D  + S++       W+GI+DKYWA   IP ++  +
Sbjct: 241 MIGIAGDSLKTEKYKTLAELNPNPDNGQKSMTFSKVIGGWVGITDKYWAVAVIPPQDKEY 300

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            S+F Y       YQ+    + +T+ P ++ T TN LFAGAK+   I+HY+ DL I +F 
Sbjct: 301 TSRFIYFDRLQTHYQSDLLGSLLTVAPNETKTITNRLFAGAKQVEIINHYQNDLKIKKFA 360

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           +LIDWGWF FI KPMF L+   Y   GNFGIAI+L TV +K L FPLA K Y S A MK 
Sbjct: 361 LLIDWGWFDFITKPMFSLIDILYKQTGNFGIAILLVTVLLKTLLFPLANKSYKSMARMKL 420

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           IQP + E++EK+ +   +  Q+A+I+LYKT  INPLAGCWP+L+Q P+FFA+YKV+ I++
Sbjct: 421 IQPMLLEIKEKYPEDRTK-QQQAIIELYKTQKINPLAGCWPMLVQFPIFFALYKVLYITI 479

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           EMRHAPF+GWI+DLAA DPT++F LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P P
Sbjct: 480 EMRHAPFFGWIQDLAAPDPTSLFNLFGLLPYTVPAFLMLGAWPLIMGITMFLQMRMNPAP 539

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
            D+ QAMI  WMP+VF F L+SFP GL+IYW+W+N++S++QQ ++MK  G +I L D L+
Sbjct: 540 QDQTQAMIFAWMPIVFTFMLASFPVGLVIYWAWNNILSMIQQGIMMKRQGVKIELFDNLK 599

Query: 572 STFSKNYNSQ 581
           + + K+   +
Sbjct: 600 AMWRKSPKKE 609


>gi|254477563|ref|ZP_05090949.1| 60 kDa inner membrane insertion protein [Ruegeria sp. R11]
 gi|214031806|gb|EEB72641.1| 60 kDa inner membrane insertion protein [Ruegeria sp. R11]
          Length = 604

 Score =  423 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 219/604 (36%), Positives = 334/604 (55%), Gaps = 27/604 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVY-------PRIEEMNNERKNIQTVKQPNQVDNSYA 54
           ++N N  +A ALS +++  W  F+                    +  +     Q     A
Sbjct: 3   DQNKNLLLATALSFLVILGWYIFFPPPEPAPQPDAEIAQTAPAGDGVSAPSAAQAIAGDA 62

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
           A      A+  + +PRV +    + G+I+L+G + DDL L+ Y + +  +SPIV +LSP+
Sbjct: 63  AAAGAAEAETAADAPRVAIDTARVTGTISLQGGRLDDLALKDYRVSLEPDSPIVKMLSPA 122

Query: 115 NTKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
            + NAY+A   +   A     ++P +NT+W+L  G+ LTP TP+ L ++N   + F RTI
Sbjct: 123 GSPNAYYALYGWAPGAGLGIDDVPGANTLWSLHEGETLTPETPVTLSWRNGKGLTFFRTI 182

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
           S+DE+Y+F++V +V N     +  +P G I RH        F +    +  + D +L E 
Sbjct: 183 SIDENYMFQVVQSVMNEGAGTVSLAPYGTIARHGMPQDLKNFFILHEGVVGMADGTLAEI 242

Query: 233 KYSDIEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
            Y D+    +             E N W+G +D YW S  +P    SF S  K+  +   
Sbjct: 243 DYDDMADFDLDARSGARSEITQVEGNGWIGFTDHYWMSTLVPEPGQSFRSIAKF-DERRE 301

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            YQ       +T+  G+    T  LFAGAKE+ TI  Y+KD  I  F   IDWGWF+F+ 
Sbjct: 302 IYQTDVVLPTVTLANGEGTEVTTELFAGAKEWATIRGYQKD-GIEGFLDSIDWGWFFFLT 360

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP+F ++ +   L+GN G AI+  TV +K+L FPLA K Y S A MK +QP++++++EK 
Sbjct: 361 KPIFAVLHWLNALIGNMGWAIIGLTVLIKILVFPLAYKSYASMAKMKELQPEMEKIKEKA 420

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                Q LQ+ M+ LYK   +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G  +
Sbjct: 421 GD-DRQKLQQEMMALYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQ 479

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL------SMFIQMKMSPPPADKGQA 517
           DL+A DPT+I  LFG+LPF  P    +    +I  L      SM++Q K++P P D  Q 
Sbjct: 480 DLSAPDPTSIMNLFGLLPFTGPEPGSILATVLIGILPLLLGISMWLQQKLNPAPTDPTQQ 539

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           MI  WMP VF+F L  F +GL++YW  +N I+  QQ +IM+ HG +  +   ++S+F K+
Sbjct: 540 MIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSSFKKS 599

Query: 578 YNSQ 581
             ++
Sbjct: 600 PKAE 603


>gi|297182643|gb|ADI18801.1| preprotein translocase subunit yidc [uncultured SAR11 cluster
           bacterium HF4000_37C10]
          Length = 560

 Score =  422 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 199/564 (35%), Positives = 321/564 (56%), Gaps = 7/564 (1%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             + N  +AI LS +++  W  F+  P +E    E +  ++ +  +             R
Sbjct: 1   MDSKNVLMAIVLSTLVLVFWATFFEPPPVERQIAEDQVTKSEELSSPSIEKVELSKKIAR 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
              +    RV+++N ++ GSI+L+GA  DD+  + Y   + S+   V  L+P ++   Y+
Sbjct: 61  DDTIDSVARVKIENNNIKGSISLQGAIIDDIIFKNYKESLESDQK-VIFLNPKSSDEGYY 119

Query: 122 AELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
            E  + S +N  ++LP  NT+W +   K+LTP  PI L + N   ++F + I LD+ YLF
Sbjct: 120 IETGWASNSNEKLKLPLDNTIWKVKGNKVLTPNKPIVLEWDNNEGLIFTKKIELDDKYLF 179

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
           KI   + N S     F P  +I R+        + + EGFI +      ++++  +  + 
Sbjct: 180 KISQGIKNTSNKSYEFFPYAQITRNYKPDVIPIYILHEGFIGMFD--DELKEEDYEDVED 237

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
                + S  WLGI+DKYW +  +P K   F S+F  +   +             +    
Sbjct: 238 EKFIINSSKGWLGITDKYWLTAIVPEKGKKFKSEFLSIDGKYKANFI--IKEATVLSSNA 295

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
           SIT     F  AKE   I  Y + L I +F++ IDWGWFYFI KP+F ++ YF+ L GNF
Sbjct: 296 SITNEINAFVMAKEVAVIDDYAEKLGIEKFDLTIDWGWFYFITKPLFFVIEYFFKLTGNF 355

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G+AI++ T  V+++FFPLA   + S A MK +QP++  L+E  K    + LQ+ M+ LYK
Sbjct: 356 GVAIIILTALVRIVFFPLANYSFRSMAKMKILQPEMIRLKELHKDDKTK-LQQEMMALYK 414

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
              +NP++GC P+L+QIP FFA+YK++ +++EMR  PF+GWI+DL+A DPT+IF LFG++
Sbjct: 415 REKVNPVSGCLPVLIQIPFFFAVYKMLYVTIEMRQQPFFGWIQDLSARDPTSIFNLFGLI 474

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
           P+  P F+ +G+WPI+M L+MF+Q K++P P D  QA I  ++P+     L+ FP+GL++
Sbjct: 475 PWDPPTFLMIGVWPILMGLTMFLQQKLNPTPPDPMQAKIFMFLPIFLTIILAPFPSGLVV 534

Query: 541 YWSWSNVISIVQQAVIMKMHGAEI 564
           YW+ SNV+++ QQ VI++    + 
Sbjct: 535 YWTVSNVLTMAQQWVIIRGTKVKT 558


>gi|240850503|ref|YP_002971902.1| preprotein translocase subunit YidC [Bartonella grahamii as4aup]
 gi|240267626|gb|ACS51214.1| preprotein translocase subunit YidC [Bartonella grahamii as4aup]
          Length = 612

 Score =  421 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 255/610 (41%), Positives = 368/610 (60%), Gaps = 30/610 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT------------------ 42
           ME N N+F+AI LS +++ AWQ  +V P+  ++  ++   Q                   
Sbjct: 1   MEYNRNFFIAIGLSFVVLIAWQFLHVAPKQAKLQKQQVITQQLSKQQSTLSTTTTNFSDD 60

Query: 43  VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
                        +  + R   L+ + R+ +K   L GSINL GAQFDDL+L+ Y L V 
Sbjct: 61  TSTHQATSIIEQPMTPEIRKAVLAKTKRIAIKTNELEGSINLVGAQFDDLHLKKYRLTVD 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKIL-TPTTPIKLVF 160
             SP + LL+P   K  Y AE  + S +   + LP S+T W +     + TP+TPI L++
Sbjct: 121 KKSPEIDLLNPKGFKTTYLAEFGFASASLPAKALPQSDTQWQIEGNNTILTPSTPITLIY 180

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
            N    +F R +S+D+H++F I D+++N S   I  S   R+ R  P   TN   +    
Sbjct: 181 NNGQGQIFRRILSVDDHFMFTIEDSISNESDQPIYLSSYARVARAAPPEHTNATYLLHEG 240

Query: 221 IAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
           +  +   SL  +KY          D  + S++    +  W+GI+DKYWA   IP +   +
Sbjct: 241 MIGIAGDSLKTEKYKTLAELDPNPDNGQKSMTFSKVTGGWIGITDKYWAVAVIPPQNKEY 300

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            S+F Y       YQ+    + +TI P ++ T TN LFAGAK+   I++Y+ DL I +F 
Sbjct: 301 TSRFIYFDRLQTHYQSDLLGSLLTIAPNETKTITNRLFAGAKQVEIINNYQNDLKIKKFA 360

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           +LIDWGWF FI KPMF L+   Y   GNFGIAI+L TV +K L FPLA K Y S A MK 
Sbjct: 361 LLIDWGWFDFITKPMFSLIDVLYKQTGNFGIAILLVTVLLKTLLFPLANKSYKSMARMKL 420

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +QP++ E++EK+     +  Q+A+I+LYKT  INPLAGCWP+L+Q P+FFA+YKV+ I++
Sbjct: 421 LQPRLLEIKEKYPDDKTK-QQQAIIELYKTEKINPLAGCWPMLVQFPIFFALYKVLYITI 479

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           EMRHAPF+GWIKDLAA DPT++F LFG+LP+  P F+ +G WP+IM ++MF+QM+M+P P
Sbjct: 480 EMRHAPFFGWIKDLAAPDPTSLFNLFGLLPYTTPTFLMIGAWPLIMGITMFLQMRMNPAP 539

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
            D+ QAMI  WMPVVF F L+SFP GL+IYW+W+N++SI+QQ ++MK  G +I L D L+
Sbjct: 540 QDQSQAMIFTWMPVVFTFMLASFPVGLVIYWAWNNILSIIQQGIMMKRQGVKIELFDNLK 599

Query: 572 STFSKNYNSQ 581
           + + K+   +
Sbjct: 600 TMWRKSPKKE 609


>gi|71083172|ref|YP_265891.1| putative inner membrane protein translocase component YidC
           [Candidatus Pelagibacter ubique HTCC1062]
 gi|123647065|sp|Q4FNF1|OXAA_PELUB RecName: Full=Inner membrane protein oxaA
 gi|71062285|gb|AAZ21288.1| 60 kDa inner membrane protein [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 558

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 208/564 (36%), Positives = 333/564 (59%), Gaps = 8/564 (1%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
               N   AI+LS  ++  +  F+   P   + N   +N     +     +         
Sbjct: 1   MDTRNVIAAISLSAAVIILYSLFFQPDPATIKKNLAEQNKIENNEDTPSLDKNENFSKLS 60

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           RA AL  + R++ +N S++GSI+LKGA  DDL  + Y+++++ N   +TLLSP N ++ Y
Sbjct: 61  RADALKENDRIQFENGSVVGSISLKGAAIDDLTFKEYNIELNRNEK-ITLLSPRNVEDGY 119

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             E  +VST  NI++P+++TVW +     LT   P+KL + N   I FE+ ISLD+ +LF
Sbjct: 120 LIESGFVSTNKNIDIPDASTVWEVSGNNKLTNNNPVKLTWSNTQGITFEKHISLDDQFLF 179

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
            + + + N+S     F   G+I+R++    +  + + EGF++VL D  L+E+ Y DI+  
Sbjct: 180 TVKEKIINSSDKSYNFYSYGQIIRNELPEISGFYILHEGFLSVLDD-ELIEEDYDDIQDK 238

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
             +   +   ++ ISDK+W +  IP K   F + F Y +   A Y    S   I +    
Sbjct: 239 KFTQIAQD-GFVAISDKFWVTSVIPPKGKEFKTTFDYKNKFRANY---ISTKGIEVKANS 294

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
           SI     +   AK    I  Y ++L I +F++ IDWG+ YFI KP+F ++ YF+ L+GN+
Sbjct: 295 SIEEKIQIIVAAKRVNVIDGYAENLNINKFDLAIDWGFMYFITKPLFFVLDYFFKLLGNY 354

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G+AI+  T+ ++L FFPLA   + S   MK + P++  L+E  K    + LQ+AM+ LYK
Sbjct: 355 GLAIIAVTICIRLAFFPLANFSFKSMGKMKLLAPEMARLKELHKDDKMK-LQQAMMALYK 413

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
              +NP++GC PIL+QIPVFFA+YKV+ +++EMRH PF+GWI DL+  DPT++F +FG++
Sbjct: 414 KEKVNPMSGCLPILVQIPVFFALYKVLFVTIEMRHMPFYGWIHDLSDRDPTSLFNVFGLI 473

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
           P+  P F+ +G WPIIM ++M+IQ K++P P D  QA I  + PV     L+ FPAGL+I
Sbjct: 474 PWDPPSFLLIGAWPIIMGITMWIQQKLNPTPPDPIQAKIFMFFPVFLTVILAPFPAGLVI 533

Query: 541 YWSWSNVISIVQQAVIMKMHGAEI 564
           YWS++N+ +++QQ ++ +    + 
Sbjct: 534 YWSFNNIFTMIQQYIVQRKMTIKT 557


>gi|91762399|ref|ZP_01264364.1| putative inner membrane protein translocase component YidC
           [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718201|gb|EAS84851.1| putative inner membrane protein translocase component YidC
           [Candidatus Pelagibacter ubique HTCC1002]
          Length = 558

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 208/564 (36%), Positives = 333/564 (59%), Gaps = 8/564 (1%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
               N   AI+LS  ++  +  F+   P   + N   +N     +     +         
Sbjct: 1   MDTRNVIAAISLSAAVIILYSLFFQPDPATIKKNLAEQNKIENNEDTPSLDKNENFSKLS 60

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           RA AL  + R++ +N S++GSI+LKGA  DDL  + Y+++++ N   +TLLSP N ++ Y
Sbjct: 61  RADALKENDRIQFENGSVVGSISLKGAAIDDLTFKEYNIELNRNEK-ITLLSPRNVEDGY 119

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             E  +VST  NI++P+++TVW +     LT   P+KL + N   I FE+ ISLD+ +LF
Sbjct: 120 LIESGFVSTNKNIDIPDASTVWEVSGNNKLTNNNPVKLTWSNTQGITFEKHISLDDQFLF 179

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
            + + + N+S     F   G+I+R++    +  + + EGF++VL D  L+E+ Y DI+  
Sbjct: 180 TVKEKIINSSDKSYNFYSYGQIIRNEIPEISGFYILHEGFLSVLDD-ELIEEDYDDIQDK 238

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
             +   +   ++ ISDK+W +  IP K   F + F Y +   A Y    S   I +    
Sbjct: 239 KFTQIAQD-GFVAISDKFWVTSVIPPKGKEFKTTFDYKNKFRANY---ISTKGIEVKANS 294

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
           SI     +   AK    I  Y ++L I +F++ IDWG+ YFI KP+F ++ YF+ L+GN+
Sbjct: 295 SIEEKIQIIVAAKRVNVIDGYAENLNINKFDLAIDWGFMYFITKPLFFVLDYFFKLLGNY 354

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G+AI+  T+ ++L FFPLA   + S   MK + P++  L+E  K    + LQ+AM+ LYK
Sbjct: 355 GLAIIAVTICIRLAFFPLANFSFKSMGKMKLLAPEMARLKELHKDDKMK-LQQAMMALYK 413

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
              +NP++GC PIL+QIPVFFA+YKV+ +++EMRH PF+GWI DL+  DPT++F +FG++
Sbjct: 414 KEKVNPMSGCLPILVQIPVFFALYKVLFVTIEMRHMPFYGWIHDLSDRDPTSLFNVFGLI 473

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
           P+  P F+ +G WPIIM ++M+IQ K++P P D  QA I  + PV     L+ FPAGL+I
Sbjct: 474 PWDPPSFLLIGAWPIIMGITMWIQQKLNPTPPDPIQAKIFMFFPVFLTVILAPFPAGLVI 533

Query: 541 YWSWSNVISIVQQAVIMKMHGAEI 564
           YWS++N+ +++QQ ++ +    + 
Sbjct: 534 YWSFNNIFTMIQQYIVQRKMTIKT 557


>gi|49474531|ref|YP_032573.1| putative inner membrane protein translocase component YidC
           [Bartonella quintana str. Toulouse]
 gi|49240035|emb|CAF26454.1| hypothetical protein BQ09780 [Bartonella quintana str. Toulouse]
          Length = 613

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 257/611 (42%), Positives = 371/611 (60%), Gaps = 31/611 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA----- 55
           ME N N+F+AI LS  ++ AW  FYV P+  ++  +R   Q + +     ++        
Sbjct: 1   MEYNRNFFIAIGLSFGVLIAWHFFYVAPKQAQLQQKRLIAQQLSKQQSTLSTSTPYFSDN 60

Query: 56  --------------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
                         +  + R +AL+ + R+ +K   L GSINL GAQFDDL L+ Y L V
Sbjct: 61  ASITHESASIITHPITPEIRNEALAKTNRIAIKTDELEGSINLVGAQFDDLLLKKYRLTV 120

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKIL-TPTTPIKLV 159
              SP + LL+P      Y AE  + S++ +   LP S+T W +       TP+TP+ L+
Sbjct: 121 DKKSPEIALLNPKGFTTTYLAEFGFTSSSLSAKALPQSDTQWQIEGNNTTLTPSTPVTLI 180

Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
           + N    +F RT+S+D HY+F I D++ N S   I  S   R+ R  P   TN   +   
Sbjct: 181 YNNGQGQIFRRTLSVDNHYMFTIEDSIKNESDKPIYLSSYARVARAAPPEHTNATYLLHE 240

Query: 220 FIAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270
            +  +   SL  +KY          D  + SI+       W+GI+DKYWA   IP ++  
Sbjct: 241 GMIGIASDSLKTEKYKTLAELNPNPDNSQKSITFSKNIGGWIGITDKYWAVAVIPPQDKE 300

Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
           + S+F Y    +  YQ+    + +T+ P ++   TN LFAGAK+   I+HY+ DL I +F
Sbjct: 301 YTSRFIYFDRLNTHYQSDLLGSLLTVAPNETKIVTNRLFAGAKQVEIINHYQNDLKIKKF 360

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
            +LIDWGWF FI KPMF L+   Y   GNFGIAI+L TV +K L FPLA K Y S A MK
Sbjct: 361 ALLIDWGWFDFITKPMFSLIDTLYKQTGNFGIAILLVTVLLKTLLFPLANKSYKSMARMK 420

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            IQP + E++EK+     +  Q+A+I+LYKT  INPLAGCWP+L+Q P+FFA+YKV+ I+
Sbjct: 421 LIQPMLLEIKEKYPDDRTK-QQQAIIELYKTQKINPLAGCWPMLIQFPIFFALYKVLYIT 479

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +EMRHAPF+GWI+DLAA DPT++F LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P 
Sbjct: 480 IEMRHAPFFGWIQDLAAPDPTSLFNLFGLLPYTVPTFLMLGAWPLIMGITMFLQMRMNPA 539

Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
           P D+ QAMI  WMPV+F F L+SFP GL+IYW+W+N++SI+QQ+++MK  G +I L D L
Sbjct: 540 PQDQTQAMIFAWMPVIFTFMLASFPVGLVIYWAWNNILSILQQSILMKRQGVKIELFDNL 599

Query: 571 RSTFSKNYNSQ 581
           ++ + K+   +
Sbjct: 600 KAMWWKSPKKE 610


>gi|330813521|ref|YP_004357760.1| inner membrane protein translocase component YidC, long form
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486616|gb|AEA81021.1| inner membrane protein translocase component YidC, long form
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 564

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 216/570 (37%), Positives = 339/570 (59%), Gaps = 14/570 (2%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA------- 54
               N   AI LS II+  WQ   + P I++   + +     K      ++ +       
Sbjct: 1   MDTKNILTAIILSTIIIVGWQVLVIDPEIKKEQAKVEKTIQTKPTAGKPSAPSLNKKIQV 60

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
                 R +AL    RV+L N  + GSI+L GA  DD+ L+ Y   +  NS  V +L+P 
Sbjct: 61  QKKKVSRQEALLTDQRVKLDNAKITGSISLVGALIDDVTLKNYQESLDENSKQVVILNPK 120

Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174
                Y+ E  + S ANNI +P++N+VW L   + LTP TPI+L + N N ++F + I +
Sbjct: 121 KINKGYYLESGWAS-ANNINVPDNNSVWKLTRNRTLTPRTPIELEWDNQNGLVFTKKIEV 179

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
           D+ YLF I +++ NNS   +      +I R +     + + + EG + V+  ++L E+ Y
Sbjct: 180 DDQYLFSITESIKNNSKANVDLFHYSQITRKEKPQVQDFYILHEGLVGVID-ETLQEEDY 238

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
            D+ K     +  ++ WLGI+DKYW +  +P K+ +F+++F Y +   A Y      N  
Sbjct: 239 DDV-KDKNQKYQGTSGWLGITDKYWLTAIVPQKKQAFNAEFIYDTAYKANYIL---TNPT 294

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           +I  GK  ++++  F GAKE  TI  Y +   I +F++ IDWGWFYF  KP+F ++ Y Y
Sbjct: 295 SIPSGKINSSSSQFFIGAKEVKTIDGYAESANINKFDLAIDWGWFYFFTKPLFFIIDYLY 354

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           N  GNFG AI+L T  +++LFFPLA   + S A MK +QP+I  +++ +K    Q +Q  
Sbjct: 355 NFSGNFGWAIVLLTAGIRILFFPLANYSFASMAKMKALQPEIARMKDLYKDDK-QKIQTE 413

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M+ LY+   INP++GC P+L+QIP FFAIYK++ ++LEMRHAPF+GWI+DL+A DPT++F
Sbjct: 414 MMGLYRKEKINPVSGCLPMLIQIPFFFAIYKMLFVTLEMRHAPFFGWIQDLSAPDPTSLF 473

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534
            LFG++P+  P F+ +G+WPI+M +SM+IQ K++P P D  QA I  + P+     L+SF
Sbjct: 474 NLFGLIPWDPPSFLMIGVWPILMGVSMWIQQKLNPAPTDPIQAKIFAFFPLFLTVMLASF 533

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           P+GL++YW+ +NV+++ QQ VI++    + 
Sbjct: 534 PSGLVVYWTVNNVLTMAQQYVIIRKTTIKT 563


>gi|307294062|ref|ZP_07573906.1| membrane protein insertase, YidC/Oxa1 family [Sphingobium
           chlorophenolicum L-1]
 gi|306880213|gb|EFN11430.1| membrane protein insertase, YidC/Oxa1 family [Sphingobium
           chlorophenolicum L-1]
          Length = 567

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 206/566 (36%), Positives = 321/566 (56%), Gaps = 12/566 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M+   N  +A+ L+  I++ W      F+          E      +        +  A 
Sbjct: 1   MDDKKNIILAVVLTAAILFGWPYVANHFFPAANPPATKIEGGKTTPLTPSGSAPAAEGAA 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
            + D A  L   PR+ ++ P + GSINLKGA+ DD+ L  Y   ++ +S  + L SPS T
Sbjct: 61  AVRDLALVLKDGPRIPIRTPKITGSINLKGARIDDIVLPTYKESIARDSHAIRLYSPSGT 120

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
           K+AYFA   +      ++ P+ N+VW   SGK LTP +P+ L + N     FE   S+DE
Sbjct: 121 KDAYFAGFGW--QGEGLKTPDGNSVWT-ASGKELTPASPVTLTWNNGAGQSFEIRYSIDE 177

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           +Y+      V+N+    +     G + R  P T  +T+ +  G + V    +  +  Y D
Sbjct: 178 NYMITAQQKVSNSGAGTVAVKSYGYVSRAHPSTDPDTWTIHVGPMGVFNGAANYDVNYKD 237

Query: 237 IEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           +EK   S  F  +  W+G +DKYW S  +P ++ +F +Q +       ++Q   S   + 
Sbjct: 238 LEKGPASQSFQSTGGWIGFTDKYWLSALVPDQKAAFSAQMR--KGAGTQFQTDISLAPVM 295

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           +  GKS+T TN LF GAKE  T+  Y +D  IP F+  IDWGWFY+  KP+F L+ + + 
Sbjct: 296 LAAGKSVTQTNRLFVGAKEVKTLEAY-QDAGIPLFDRAIDWGWFYWFEKPIFALLHWLFE 354

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            +GNFG+AI+  T  V+ L FP+A++Q+ S A M+ +QPK+  L+EK+K   P+ LQ+ M
Sbjct: 355 HIGNFGVAIICLTFVVRGLMFPVAQRQFASMAAMRAVQPKMKALQEKYKDDKPK-LQQEM 413

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NPLAGC PI +QIP+FFA+YKV+ +++EMRH PF  WIKDL+A DP +I  
Sbjct: 414 MELYKREKVNPLAGCLPIFIQIPIFFALYKVLQLTIEMRHQPFVLWIKDLSAPDPLHILN 473

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
           LFG+LPF  P F+ +G+  +++ +SM+ Q K++P   D  Q  +   MP + +F ++ F 
Sbjct: 474 LFGLLPFTPPAFLGIGVLALLLGISMYFQFKLNPAQMDPMQQQVFAIMPWMMMFIMAPFA 533

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHG 561
           AGL++YW  +N +S++QQ  + K H 
Sbjct: 534 AGLLVYWITNNCLSMLQQWWLYKRHP 559


>gi|329888537|ref|ZP_08267135.1| membrane protein insertase, YidC/Oxa1 family, N-terminal
           domain-containing protein [Brevundimonas diminuta ATCC
           11568]
 gi|328847093|gb|EGF96655.1| membrane protein insertase, YidC/Oxa1 family, N-terminal
           domain-containing protein [Brevundimonas diminuta ATCC
           11568]
          Length = 600

 Score =  417 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 227/599 (37%), Positives = 338/599 (56%), Gaps = 25/599 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIE--------EMNNERKNIQTVKQPNQVDNSY 53
           E + N  +    + +I+  +    + P+ E            ++    +         + 
Sbjct: 4   ENSRNTIIFFVCAALIMGVYYFMVMRPQAESRRQAQIVAAEQQKAREASADAGLTPSGAA 63

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
             V I DRAQAL    RV ++ P+L GS++L+GA+ DDL L  Y   +  NSP V L  P
Sbjct: 64  PGVFIKDRAQALGTVARVPIQTPTLKGSLSLQGARIDDLYLTRYRETLDKNSPPVELFRP 123

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
              ++AYFA+  +        +P  NTVW L  G  LTPTTP++L + N + + F R +S
Sbjct: 124 QGMEHAYFAQFGWSGPNVAGGVPGPNTVWRLTKGSTLTPTTPVELTWDNGSGLRFTRVVS 183

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGD---KSL 229
           +D+ Y+F + DTV N     I  +P GR+ R   P        + EG I   GD    S 
Sbjct: 184 IDDQYMFTVKDTVANLGTQAIAIAPYGRVERQGVPVDLGKQMILHEGAIGTFGDGGGYST 243

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAK 288
            + KY D  K        +  WLGI+DKYW +  IP+++ +   +F      G   ++A 
Sbjct: 244 EQVKYKDWAKKPRIENQSTGGWLGITDKYWLAALIPTQDETIEGRFSVRDAQGMNIHEAA 303

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                 TI PG+ I  T  LFAGAK    +  YE+ L +PRF   IDWG F+F+ +P+F 
Sbjct: 304 MLGATHTIQPGRQIEETQRLFAGAKRAEVLKAYEQSLNLPRFVYAIDWGMFWFLTRPIFT 363

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           ++ +FY ++GNFG+AI+  TV VKL+ FPLA K Y S + M+N+QPK++E+++K   S P
Sbjct: 364 VVEFFYGVLGNFGLAILALTVVVKLILFPLANKSYESLSKMRNLQPKMEEIKKKH-GSEP 422

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q  Q+ M+ LY+   INPLAGC P+++QIPVF+A+YKV+ +++EMRHAPF+GWI+DL+A 
Sbjct: 423 QKQQQEMMALYQREKINPLAGCLPMVVQIPVFYALYKVLFVTIEMRHAPFFGWIRDLSAR 482

Query: 469 DPTNIFTLFGILPFYLPGF----------MHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           DP+ I+ LFG +P+               +H+G+ P++   +M++QM M+PP  D  Q  
Sbjct: 483 DPSTIWNLFGAIPWDPATLPILGGILNGPLHLGVLPLVYGFTMWLQMAMNPPAQDPMQRQ 542

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           I   MP+VF F ++ F AGL+IYW+W+NV+SI+QQ VIM    AE  +   L + F K 
Sbjct: 543 IFALMPIVFTFIMAPFAAGLLIYWAWNNVLSIIQQYVIMHRFKAENPIDAFL-ARFKKA 600


>gi|294010745|ref|YP_003544205.1| preprotein translocase YidC subunit [Sphingobium japonicum UT26S]
 gi|292674075|dbj|BAI95593.1| preprotein translocase YidC subunit [Sphingobium japonicum UT26S]
          Length = 567

 Score =  417 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 211/566 (37%), Positives = 321/566 (56%), Gaps = 12/566 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M+   N  +A+ L+  I++ W    Q F+          E      +        +  A 
Sbjct: 1   MDDKKNIILAVVLTAAILFGWPYVAQYFFPAANPPATKIEGGKTTPLTPSGAAPAAEGAA 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
            I D A  L  SPRV ++ P + GSINLKGA+ DD+ L  Y   ++ +SP + L SPS T
Sbjct: 61  AIRDLALVLKDSPRVAIRTPKITGSINLKGARIDDIVLPTYKETIAKSSPAIRLYSPSGT 120

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
           K+AYFA   +      ++ P+  TVW   S K LTPT+P+ L + N     FE   S+DE
Sbjct: 121 KHAYFAGFGW--QGEGVKTPDGGTVWT-ASAKELTPTSPVTLSWNNGAGQTFEIRYSIDE 177

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           +Y+      V+N     +     G + R  P    +T+ +  G + V    +  +  YSD
Sbjct: 178 NYMITAQQKVSNGGAGAVGVKSYGYVSRATPSADPDTWTIHVGPMGVFNGAANYDVNYSD 237

Query: 237 IEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           +EK   +  F  +  W+G +DKYW S  IP ++ +F  Q +       ++Q   S   I 
Sbjct: 238 LEKGPATQSFQSTGGWIGFTDKYWLSALIPDQKAAFTGQMR--KGAGTQFQTDMSLAPIM 295

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           + PGK++T TN LF GAKE  T+  Y +D  +P F+  IDWGWFY+  KP+F L+ + + 
Sbjct: 296 VAPGKAVTQTNRLFVGAKEVKTLEAY-QDAGVPLFDRAIDWGWFYWFEKPIFALLHWLFE 354

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            +GNFG+AI+  T  V+ L FP+A++Q+ S A M+ +QPK+  L+EK+K   P  LQ+ M
Sbjct: 355 HIGNFGVAIICLTFVVRGLMFPVAQRQFASMAAMRAVQPKMKALQEKYKDDKP-RLQQEM 413

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NPLAGC PI +QIP+FFA+YKV+ +++EMRH PF  WIKDL+A DP +I  
Sbjct: 414 MELYKREKVNPLAGCLPIFIQIPIFFALYKVLQLTIEMRHQPFVLWIKDLSAPDPLHIVN 473

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
           LFG+LPF  P F+ +G+  +++ +SM+ Q K++P   D  Q  +   MP + +F ++ F 
Sbjct: 474 LFGLLPFTPPAFLGIGVLALLLGISMYFQFKLNPAQMDPMQQQVFAIMPWMMMFIMAPFA 533

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHG 561
           AGL++YW  +N +S++QQ  + K H 
Sbjct: 534 AGLLVYWITNNCLSMLQQWWLYKRHP 559


>gi|94495881|ref|ZP_01302460.1| 60 kDa inner membrane insertion protein [Sphingomonas sp. SKA58]
 gi|94424573|gb|EAT09595.1| 60 kDa inner membrane insertion protein [Sphingomonas sp. SKA58]
          Length = 568

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 204/568 (35%), Positives = 318/568 (55%), Gaps = 12/568 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M+   N  +A+ L+  I++ W      F+          E      V +P+    + +  
Sbjct: 1   MDDKKNIILAVLLTAAILFGWPYISNYFFPTANPPATKIEGGKQVPVARPDADPAADSPA 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
            I DRA  L  SPR+ ++   L GSINLKGA+ DD+ L  Y   ++ +SP V L SPS T
Sbjct: 61  AIRDRALVLRESPRIPIRTAKLTGSINLKGARIDDIVLPTYKETIAKDSPAVRLYSPSGT 120

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
           ++AYFA   +      +  P+ NT+W    G  LTPT+P+ L + N    LFE  +S+D+
Sbjct: 121 QDAYFAGFGW--QGEGLRAPDRNTLWT-AQGSALTPTSPVTLSWNNGAGQLFEIRLSVDD 177

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           +Y+      V+N     +   P   I R       +T+ +  G + V    +  +  Y D
Sbjct: 178 NYMITAAQKVSNTGTGTVGVKPYAYISRTGIPKDPDTWTIHVGPMGVFNGAANYDVNYKD 237

Query: 237 IEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           ++K   + +F     W+G +DKYW S  +P+ +  F  QF+       +YQA  +     
Sbjct: 238 LDKGPSVQSFQSKGGWIGFTDKYWLSALVPAADADFAGQFR--KGAGTQYQADVALGSNM 295

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           + PGK++T T  LF GAKE  T+  Y +D  +P F+  IDWGWFY+  KP+F L+ + + 
Sbjct: 296 VAPGKAVTQTQRLFVGAKEVKTLEAY-QDAGVPLFDRAIDWGWFYWFEKPIFALLHWLFE 354

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            +GNFG+AI+  T  V+ + FP+A++Q+ S A M+ +QPK+  L+EK K    Q+  K M
Sbjct: 355 HIGNFGVAIICLTFVVRAIMFPIAQRQFSSMAAMRALQPKMKALQEKHKDDKQQLQMK-M 413

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NPLAGC PI +QIP+FFA+YKV+ +++EMRH PF  WIKDL+A DP +I  
Sbjct: 414 MELYKQEKVNPLAGCLPIFIQIPIFFALYKVLMLTIEMRHQPFVLWIKDLSAPDPLHILN 473

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
           LFG+L F  P F+ +G+  +++ +SM+ Q K++P   D  Q  I+  MP + +F ++ F 
Sbjct: 474 LFGLLDFTPPAFLGIGVLALLLGISMYFQFKLNPTQMDPMQQQIMGIMPWMMMFIMAPFA 533

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           AGL++YW  +N +S+ QQ  + + H   
Sbjct: 534 AGLLVYWITNNCLSMAQQWWLYRKHPVP 561


>gi|319408960|emb|CBI82617.1| translocase precursor subunit [Bartonella schoenbuchensis R1]
          Length = 611

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 259/609 (42%), Positives = 375/609 (61%), Gaps = 29/609 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA------ 54
           ME N N+F+AI LS+II  AW  FYV P+  ++   +   Q  KQ +++ ++        
Sbjct: 1   MEYNRNFFIAIGLSLIIFVAWHFFYVAPQQAKLQEMQMAQQLSKQSSEIPSTDMHFSDSA 60

Query: 55  -----------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
                       +  ++R+  L+ + R+ +K   L GSINL GAQFDDL L+ Y L V  
Sbjct: 61  QISGSGSISDRPMTPENRSAELAKTNRIAIKTDELEGSINLVGAQFDDLFLKKYRLTVDK 120

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKIL-TPTTPIKLVFK 161
            SP + LL+P+     Y AE  + S++     LP S+T W +       TP+TP+ L++ 
Sbjct: 121 GSPEIALLNPNGFNTTYLAEFGFTSSSLPATALPQSHTQWQIEGKNTTLTPSTPVTLIYN 180

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
           N    +F RT+S+D HY+F I D++ N S + I  SP  R+ R  P   TN   +    +
Sbjct: 181 NGQGQIFRRTLSIDNHYMFTIEDSIKNESDNPIYLSPYARVARAAPPEYTNATYLLHEGM 240

Query: 222 AVLGDKSLVEQKYSD---------IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
             +   SL  + Y +           + S+     +  W+GI+DKYWA V IP ++  + 
Sbjct: 241 IGIAGDSLKTETYKNLEELNPNPENGQKSMIFSKVTGGWIGITDKYWAVVVIPPQDQEYT 300

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
           S+F Y +  +  YQ+   ++ +T+ P ++ T TN LFAGAK+   I+ Y+  L I +F +
Sbjct: 301 SRFIYFNQLNTHYQSDLQSSLLTVAPNETKTITNHLFAGAKQVEIINRYQNQLKIRKFGL 360

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           LIDWGWF FI KPMF L+  FY   GNFGIAI+L TV +K+L FPLA K Y S A MK +
Sbjct: 361 LIDWGWFDFITKPMFALIDIFYKQTGNFGIAILLVTVLLKVLLFPLANKSYKSMARMKLV 420

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QP + E++EK+     +  Q+A+I LYKT  INPLAGCWP+L+Q P+FFA+YKV+ I++E
Sbjct: 421 QPMMQEIKEKYADDRVK-QQQAVIALYKTQKINPLAGCWPMLVQFPIFFALYKVLYITIE 479

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P P 
Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYEVPTFLILGAWPLIMGITMFLQMQMNPTPP 539

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  QAMI  WMPV+F F L+SFPAGL+IYW+W+N +SI+QQ ++MK  G +I L + L++
Sbjct: 540 DPTQAMIFTWMPVIFTFMLASFPAGLVIYWAWNNTLSIIQQGIMMKRQGVKIELFNNLKA 599

Query: 573 TFSKNYNSQ 581
            F K    +
Sbjct: 600 MFHKKSKKE 608


>gi|296775679|gb|ADH42956.1| preprotein translocase subunit YidC [uncultured SAR11 cluster alpha
           proteobacterium H17925_23J24]
          Length = 569

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 211/576 (36%), Positives = 326/576 (56%), Gaps = 18/576 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV---- 56
           M+   N   AIALS  +++ W   +  P+IEE     ++    K+    D     V    
Sbjct: 1   MDF-RNVIFAIALSFAVLFGWSVIFETPKIEEQAKLEQSENYQKEDAASDAPSVNVEKKD 59

Query: 57  -LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
             I  R  A+  + R+  +N +++GSI LKGA  DD+  + Y+  + S+   VT L+P  
Sbjct: 60  LPIVSRNDAIKSTNRINFENENVVGSITLKGALIDDITFKKYNETLGSDKK-VTYLNPQE 118

Query: 116 TKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174
           T   YF E  + ++   +I LPN +T+W +     L+  +P+ + +KN + I F + I L
Sbjct: 119 TNEGYFIETGWAASNVEDIGLPNKDTLWKVKGNNKLSTGSPVIMEWKNKSGITFRKKIEL 178

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ-----TATNTFGVQEGFIAVLGDKSL 229
           D  +LF++   + N S   +   P  +I R++       + + T  + +GFI V      
Sbjct: 179 DSKFLFRVTQEIQNKSGSIVELYPYAQITRNQKPVLQAGSMSGTLILHDGFIGVFN--ED 236

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
           +++   D  K      +  + WLGI+DK+W +  +P K  SF  +F Y S+         
Sbjct: 237 LKEYDYDDIKDKKKEHNAESGWLGITDKFWITALVPEKNQSFRGEFVYKSESFKANYI-- 294

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
           +   I + P  S  +T  +F  AKE   I  Y +  +I +F++ IDWGW YF+ KP+F +
Sbjct: 295 ANKPIVVQPSSSKASTTKIFVAAKEVKVIDGYAEAESINKFDLTIDWGWLYFLTKPLFFI 354

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           ++Y + L  NFGIAI+L T  V+LLFFPLA   + S A MK +QP++  L+E  K    +
Sbjct: 355 INYLFELTKNFGIAIILVTAAVRLLFFPLANYSFRSMAKMKILQPELLRLKEVHKGDKVK 414

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            LQ+ M+ LY+   +NPL+GC PIL+QIP FFAIYK++ ISLEMRH PF+GWIKDL+A D
Sbjct: 415 -LQQEMMALYRREKVNPLSGCLPILIQIPFFFAIYKMLLISLEMRHQPFFGWIKDLSAQD 473

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529
           PT+IF +FG++P+  P F+ +G WPI+M  +M++Q K++P P D  QA I  + P+    
Sbjct: 474 PTSIFNIFGLIPWDPPSFLIIGAWPIMMGATMYLQQKLNPTPPDPIQAKIFLFFPLFLTI 533

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
            L+ FPAGL++YW+ +NV++I QQ VIMK    +  
Sbjct: 534 ILAPFPAGLVVYWTINNVLTIAQQWVIMKRTTVKTK 569


>gi|197103856|ref|YP_002129233.1| preprotein translocase subunit [Phenylobacterium zucineum HLK1]
 gi|254773009|sp|B4RDV5|OXAA_PHEZH RecName: Full=Inner membrane protein oxaA
 gi|196477276|gb|ACG76804.1| preprotein translocase subunit [Phenylobacterium zucineum HLK1]
          Length = 598

 Score =  414 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 206/596 (34%), Positives = 322/596 (54%), Gaps = 19/596 (3%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK-----NIQTVKQPNQVDNSYAAV 56
           +   N  +    + +++  +Q F + P  +    E                    +    
Sbjct: 4   DNTRNTIIFFVCAALLLVLYQVFVIGPADKRRQAELARQAPPAAAAQAGQAGAPAAPQVP 63

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
               R  A++ +PRV++  P L GS++L+GA+ DDL L  +   V  +SP V LL P   
Sbjct: 64  QAMTRQAAVAATPRVKIDTPMLTGSLSLRGARIDDLYLDRFRQTVEKDSPPVELLRPEGA 123

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
           +  +FAE+ +V  AN   LP+S  VW L  G  L P  P+ L + N   + F R I +D+
Sbjct: 124 QYPWFAEVGWVG-ANVPGLPDSGAVWTLAQGSTLAPGQPVVLTYANGQGLTFTRRIEVDD 182

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            YLF I DTV N +   +  +P G + R           +         D  L + KY  
Sbjct: 183 RYLFTITDTVANTTGQPVTIAPYGTVQRQGVPADLGKNQIVHEGAIGWLDGKLRQVKYGK 242

Query: 237 IEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEI 294
             K      ++ +  WLGI+DKYW +  IP ++ +   QF+     G     A F    +
Sbjct: 243 WRKEGGGPAYNSTGGWLGITDKYWLAALIPGQQEAVTGQFRRTQAPGVDVLDANFVGAPV 302

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G+ ++ T   FAGAK+ P +  YE+ L +  F+  +DWG F+F+ +P+F  + + +
Sbjct: 303 TIPAGRQVSETTRFFAGAKQVPILRDYEQSLGVAHFDNAVDWGNFWFLTRPIFQFLEFIH 362

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
             +G FG+AI+  TV V+L+FFPLA KQY S   MK +QP+++ELR+K+K  P +  Q+ 
Sbjct: 363 RYIGTFGLAILALTVVVRLIFFPLANKQYESITKMKKVQPQMEELRKKYKDDPAK-QQQE 421

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           ++ LY+   +NPLAGC P+LLQIPVF+A+YKV+++++EMRHAPF GWI+DL+A DPT I+
Sbjct: 422 LLALYQREKVNPLAGCLPLLLQIPVFYALYKVLTVTIEMRHAPFMGWIQDLSARDPTTIW 481

Query: 475 TLFGILPFYLPGF----------MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
            LFG++P+               +H+G+ PI+   +M++ M MSPP  D  Q  I   MP
Sbjct: 482 NLFGLIPWDPASAPLIGAFLNGPLHLGVLPILYGFTMWLTMAMSPPAGDPIQQKIFQLMP 541

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           ++F F ++ F  GL+IYW+WSNV++++QQ VIM+    +  +   +R    K   +
Sbjct: 542 IIFTFIMAPFAVGLLIYWTWSNVLTLLQQYVIMRRFKVDNPIDQIIRKLTGKPKPA 597


>gi|157803235|ref|YP_001491784.1| putative inner membrane protein translocase component YidC
           [Rickettsia canadensis str. McKiel]
 gi|166977408|sp|A8EXB6|OXAA_RICCK RecName: Full=Inner membrane protein oxaA
 gi|157784498|gb|ABV72999.1| putative inner membrane protein translocase component YidC
           [Rickettsia canadensis str. McKiel]
          Length = 560

 Score =  414 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 237/562 (42%), Positives = 344/562 (61%), Gaps = 4/562 (0%)

Query: 1   MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           M  N  N   AI LS+ I++ WQ F V P  ++   +    +      Q   +      D
Sbjct: 1   MNNNIMNLIAAIVLSLSIIFGWQYFVVKPEHKKQQQQIAMQKAENLKKQKLKALIKPASD 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
              Q  +   R+++++ SL GSI+LKG +FDDL L+ Y  D+S NS  V L SP+NT+NA
Sbjct: 61  LVVQEANQVQRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSTEVRLFSPANTENA 120

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           YFAE+  VS  ++++LPN++T+WN   G+IL+P  P+ L + N + + F  TI+LDE+YL
Sbjct: 121 YFAEIGLVSNLSSVKLPNNDTIWN-SDGEILSPEKPVNLFWVNEDGVKFLVTITLDENYL 179

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           F +  T+ NNS  ++     G I R           + +G I  + +           +K
Sbjct: 180 FTVEQTIVNNSDKELPVQSYGLINRKYIAVEKAVNILHQGPIGCINENLKEYSYDDIKDK 239

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILP 298
            S         W+G++DKYW S  IP K +++ S F Y L+ G  RYQ  F +    I  
Sbjct: 240 KSEKFVASKVDWIGMTDKYWLSSLIPDKSSNYSSNFNYALTQGVERYQVDFISPVQIIKS 299

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
           G++ + T+ +FAGAK+   +  YEK   I  F+  ID+GWFY I KP+F  M++FY  VG
Sbjct: 300 GENFSITSRIFAGAKKVDLLDKYEKQYGIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVG 359

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           NFGI+I++ TV +KLL F LA K Y S   MKN+QP+ID ++  +       L + ++ L
Sbjct: 360 NFGISILIVTVIIKLLMFTLANKSYCSMKKMKNLQPEIDRIKNLYGDDKA-RLNQEIMAL 418

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG
Sbjct: 419 YKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFG 478

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
            LPF  P F+ +G WPI+M+++MF+Q +MSP PAD  QA ++ +MP++F+   SSFP GL
Sbjct: 479 FLPFSPPSFLMIGAWPILMAITMFLQQRMSPEPADPVQAQVMKFMPLIFLVMFSSFPVGL 538

Query: 539 IIYWSWSNVISIVQQAVIMKMH 560
           +IYWSW+N++SI+QQ  I K +
Sbjct: 539 LIYWSWNNILSIIQQYYINKFN 560


>gi|91204826|ref|YP_537181.1| putative inner membrane protein translocase component YidC
           [Rickettsia bellii RML369-C]
 gi|157826396|ref|YP_001495460.1| putative inner membrane protein translocase component YidC
           [Rickettsia bellii OSU 85-389]
 gi|122426155|sp|Q1RKM2|OXAA_RICBR RecName: Full=Inner membrane protein oxaA
 gi|166977407|sp|A8GUC7|OXAA_RICB8 RecName: Full=Inner membrane protein oxaA
 gi|91068370|gb|ABE04092.1| Preprotein translocase subunit YidC [Rickettsia bellii RML369-C]
 gi|157801700|gb|ABV78423.1| putative inner membrane protein translocase component YidC
           [Rickettsia bellii OSU 85-389]
          Length = 559

 Score =  412 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 235/560 (41%), Positives = 344/560 (61%), Gaps = 6/560 (1%)

Query: 1   MERN-WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           M  N  N   AI LS+ I++ WQ F V P+ ++   +    +      +      A  + 
Sbjct: 1   MNNNIVNLVAAIVLSLGIIFGWQYFIVKPQQQKQQQQIALQKAKDLKKKESAQLEATPVI 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
            +    S +PR+++ + +L GSI+LKG +FDDL L+ Y  D+S NSP V L SPS+TK+A
Sbjct: 61  VQEA--SQAPRIKIDSNALSGSISLKGLRFDDLILKKYKQDLSENSPEVVLFSPSDTKDA 118

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           YFAE+ +VS  ++++LPN+ T+WN    +ILTP  P+ L + N + + F   I++DE+YL
Sbjct: 119 YFAEIGWVSNLSSVKLPNNETIWN-SDSEILTPEKPVNLFWVNEDGVKFLVAITVDENYL 177

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           F I  T+ NNS  ++     G I R           + +G I  + +           +K
Sbjct: 178 FTIEQTIVNNSNQELPVQSYGLINRKYTAVEKAVNILHQGPIGCIDENLKEYSYDDIKDK 237

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILP 298
            S         W+GI+DKYW +  IP K +++ S F Y +     RYQ  F +    + P
Sbjct: 238 KSEKFSASKVDWIGITDKYWLTSLIPDKSSNYSSNFNYAVKQEVERYQVDFISPVQIVKP 297

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
           G++ +    LFAGAK+   +  YEK   I  F+  ID+GWFY I KP+F  M++FY  VG
Sbjct: 298 GENFSIKGRLFAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYKYVG 357

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           NFGI+I++ TV +KLL F LA K Y S   MKN+QP+I+ ++  +       L + ++ L
Sbjct: 358 NFGISILIVTVIIKLLMFTLANKSYRSMKRMKNLQPEINRIKNLYGDDKA-RLNQEIMAL 416

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT+IF LFG
Sbjct: 417 YKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTSIFNLFG 476

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
           +L F LP F+ +G WPI+M+++MF+Q +MSP PAD  QA ++ +MP+VF+   SSFPAGL
Sbjct: 477 LLHFSLPSFLMIGAWPILMAITMFLQQRMSPEPADPVQAQVMKFMPLVFLVMFSSFPAGL 536

Query: 539 IIYWSWSNVISIVQQAVIMK 558
           +IYWSW+N++SI+QQ  I K
Sbjct: 537 LIYWSWNNILSIIQQYYINK 556


>gi|294085069|ref|YP_003551829.1| 60 kDa inner membrane insertion protein [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664644|gb|ADE39745.1| 60 kDa inner membrane insertion protein [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 592

 Score =  411 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 210/588 (35%), Positives = 334/588 (56%), Gaps = 34/588 (5%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN-----------------------NERKN 39
            N N  +AIALS+++++ WQ F + P++E+                         ++  +
Sbjct: 4   DNRNLILAIALSMVVLFGWQMFVIKPQLEQEAAQQELLAAQAQAEAALQASQQADSDTPS 63

Query: 40  IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99
           +      N   N+ A       A+    +PR+ +  P + GSI++ GA+ DD+ L  Y  
Sbjct: 64  VAQSSGSNVAVNNGAVSGGISDAKPQDTAPRILIDAPLITGSISVMGARIDDVVLTDYKE 123

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159
                S  +T L  +++   +F E  + S+  N  +P ++T+W   +  +L+P  P+ L 
Sbjct: 124 TQDPESKNITFLHKASSSQPFFVEFGWSSSDANQPMPRADTLWQ-TNKDVLSPGAPVTLR 182

Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
           + N   + F R IS+++ YL    D+V +     I   P G + RH     +  + + EG
Sbjct: 183 WDNGQGLTFIRQISINDDYLISYDDSVQSTLDAAITLFPYGLVRRHGTPPTSGIYILHEG 242

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESN----SWLGISDKYWASVFIPSKETSFHSQF 275
            + V   ++L E+ YSD+  +       +      W+G++DKYW +  +P + T +   F
Sbjct: 243 PLGVFD-ETLQEEDYSDLRDAEQGKIAVTPSKAGGWIGLTDKYWLAALLPDQNTRYDFSF 301

Query: 276 KYLSDGHARYQAKFS-ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
           + L+    RYQ  +  +  + + P  S++    +FAGAK    +  Y +DL IP F++ I
Sbjct: 302 QSLAGSGERYQVDYIDSKGLVLAPNTSVSAKGRVFAGAKIVKLLDQYREDLGIPNFDLAI 361

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           D+GWFYF+ KP F  +++   L+GNFG+A +  TV VK++FFPLA K Y S   M+ + P
Sbjct: 362 DFGWFYFLTKPFFYAINWLNELLGNFGLATIAFTVVVKVVFFPLANKSYQSMGKMRLLAP 421

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           KI +LRE+F       L K M+ LYK   +NP AGC P+LLQIPVFFA+YKV+ +++EMR
Sbjct: 422 KIQQLRERF-GEDKMALNKEMMALYKAEKVNPAAGCLPVLLQIPVFFALYKVLFVTIEMR 480

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYL---PGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           HAPF+GWI DL+A DPT+IF +FG+LPF +   P F+ +G WPI+M +SMF+QM+++P P
Sbjct: 481 HAPFFGWITDLSAPDPTSIFNVFGLLPFSVDFLPPFLQLGAWPIMMGVSMFLQMRLNPAP 540

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            D  QA +   MP+ F F L++FPAGL+IYW+W+N++S+ QQ  IM+ 
Sbjct: 541 PDPIQAKVFQLMPIFFTFLLATFPAGLVIYWTWNNLLSMGQQWYIMRR 588


>gi|294675902|ref|YP_003576517.1| inner membrane protein OxaA [Rhodobacter capsulatus SB 1003]
 gi|294474722|gb|ADE84110.1| inner membrane protein OxaA [Rhodobacter capsulatus SB 1003]
          Length = 615

 Score =  411 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 222/618 (35%), Positives = 326/618 (52%), Gaps = 44/618 (7%)

Query: 1   ME-RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           M+ +N N  +A  LS +++  W  F+  P+ E  +           P     + AA  ++
Sbjct: 1   MDNQNRNLILATVLSALVIVVWTVFFPPPKPEPTDPAVAEQTATPAPTAAPVATAAPAVE 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS----- 114
              +A    PRV +  P+L GSI+L GA+FDDL+L+ YH  +   SP+V LL+P      
Sbjct: 61  PAPEA----PRVTIDTPALTGSISLLGARFDDLSLKHYHEKLDPASPLVRLLAPVGGSDL 116

Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
           N    Y+    + + A     ++P   T+W   +G  LTP TP+ L + N   + F RTI
Sbjct: 117 NAAKPYYVVQGWSALAGVTAAQVPGPKTLWTAPAGAKLTPETPLVLTWDNGAGLTFTRTI 176

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG----DKS 228
           ++D  YLF + D VTN     +  +P G I RH        + + EG + +      +  
Sbjct: 177 AVDPQYLFTVTDAVTNTGAAAVSIAPWGIIARHGIPAGNRVYVLHEGAVRMTNGELQEIK 236

Query: 229 LVEQKYSDIEKSSISNFHESN---SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
             +    D  +        S     W G +DKYW +  IP     F S  KY+      Y
Sbjct: 237 YKKITDLDALEGEGQADVRSADTGGWAGFTDKYWMTTLIPDT-ARFTSVVKYVPSA-DLY 294

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA----------------IPR 329
           Q +     + I  G S + T  LFAGAKE+  I  Y+ D                  I R
Sbjct: 295 QTETRQPAVEIAAGASTSVTMRLFAGAKEWEAIAQYQNDPGMFDRLFGDKIDPTQPQITR 354

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F   IDWGW+YF+ KPMF L+ + + ++GN G AI+  TV +KL+ FPLA+  Y+S A M
Sbjct: 355 FVDSIDWGWYYFLTKPMFRLLHWLHAVLGNMGWAIIALTVIIKLIVFPLARTSYISMAKM 414

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           K IQP ++ L+E+ K    Q LQ+ M++LYK   INP AGC PILLQIP+FF++YKVI +
Sbjct: 415 KEIQPAMEALKERTKDDK-QALQRGMMELYKREKINPAAGCLPILLQIPIFFSLYKVIYV 473

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFI 503
           ++E+ HAP+ GWIKDL+A DP++I  LFG+LP+  P          +G+ PI++ +SM+ 
Sbjct: 474 TIELYHAPWIGWIKDLSAPDPSSILNLFGLLPYATPEPGSLLFIFSLGVLPILLGISMWF 533

Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           Q K++P P D  QA I  WMP +F+F L  F +GL++YW  +NVI+ +QQ  IM +HG  
Sbjct: 534 QQKLNPAPTDPSQAAIFAWMPWIFMFMLGGFASGLVLYWIANNVITFIQQYSIMSLHGKR 593

Query: 564 IGLIDRLRSTFSKNYNSQ 581
             L   + + F K    +
Sbjct: 594 PDLFGNIIAGFRKKTAEE 611


>gi|157964113|ref|YP_001498937.1| putative inner membrane protein translocase component YidC
           [Rickettsia massiliae MTU5]
 gi|166977409|sp|A8F0F4|OXAA_RICM5 RecName: Full=Inner membrane protein oxaA
 gi|157843889|gb|ABV84390.1| Preprotein translocase subunit YidC [Rickettsia massiliae MTU5]
          Length = 560

 Score =  411 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 238/562 (42%), Positives = 342/562 (60%), Gaps = 4/562 (0%)

Query: 1   MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           M  N  N   AI LS+ I++ WQ F V P  ++   +    +      Q   +       
Sbjct: 1   MNNNIINLVAAIILSLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATG 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
              Q  S   R+++++ SL GSI+LKG +FDDL L+ Y  D+S NSP V L SPSNT+NA
Sbjct: 61  IVVQEESQIQRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPSNTENA 120

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           YFAE+  VS  ++++LPN++T+WN    +IL+P  P+ L + N + + F  TI++DE+YL
Sbjct: 121 YFAEIGLVSNLSSVKLPNNDTIWN-SDSEILSPEKPVHLFWVNEDGVKFLVTITVDENYL 179

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           F I  T+ N S  ++     G I R           + +G I  + +           +K
Sbjct: 180 FTIEQTIVNYSDKELPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDK 239

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILP 298
            S         W+GI+DKYW S  IP K +++ S F Y L  G  RYQ  F +    I P
Sbjct: 240 KSEKFAASKVDWIGITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKP 299

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
           G++ +  + +FAGAK+   +  YEK   I  F+  ID+GWFY I KP+F  M++FY  VG
Sbjct: 300 GENFSIKSRIFAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVG 359

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           NFG++I++ TV +KLL F LA K Y S   MKN+QP+ID ++  +       L + ++ L
Sbjct: 360 NFGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMAL 418

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NP+AGC PIL+QIPVFF+IYKV+ +++EMR  PF+GWIKDL+A DPT IF LFG
Sbjct: 419 YKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQTPFYGWIKDLSAPDPTTIFNLFG 478

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
           +LPF  P F+ +G WPI+M+++MF+Q KMSP PAD  QA ++ +MP++F+F  SSFP GL
Sbjct: 479 LLPFSPPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGL 538

Query: 539 IIYWSWSNVISIVQQAVIMKMH 560
           +IYWSW+N++SI+QQ  I K +
Sbjct: 539 LIYWSWNNILSIIQQYYINKFN 560


>gi|114770125|ref|ZP_01447663.1| putative inner membrane protein translocase component YidC [alpha
           proteobacterium HTCC2255]
 gi|114548962|gb|EAU51845.1| putative inner membrane protein translocase component YidC [alpha
           proteobacterium HTCC2255]
          Length = 612

 Score =  411 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 215/609 (35%), Positives = 341/609 (55%), Gaps = 37/609 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--------KNIQTVKQPNQVDNSY 53
           + N N  +A  LS++++  W  F+     + +   +            T         + 
Sbjct: 4   DNNKNMILASVLSMLVLLTWFYFFPQEDYQPVATNQITASENGIAAAPTAGNGIASAPAI 63

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
           +  + + R  AL  + RVE+++  + GS++L GA+ DDL L  Y++ ++  S  VTLLSP
Sbjct: 64  STTVAETREIALEKTKRVEIRSNRIKGSLSLTGARIDDLKLLDYNVKLNDTSEKVTLLSP 123

Query: 114 SNTKNAYFAELDYVSTANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           +   +AY+    +    +    ++P + T+W++ +G ILTP + + L + N+N ++F R 
Sbjct: 124 AGGPSAYYILHGFSPAGSLDFDDVPTATTIWSVENGNILTPNSSVTLKWDNSNGLVFYRK 183

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP---------QTATNTFGVQEGFIA 222
           I +D+ Y+F I  +V NN+   I  +P G I +  P         +++ N   +    I 
Sbjct: 184 IEVDDDYMFTITQSVQNNTNANISLAPYGLIAQKGPIARAAYGRQESSKNGVYILHEGIV 243

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHE---------SNSWLGISDKYWASVFIPSKETSFHS 273
           +    SL E  YSD+     S+               W+G + KYW +  IP   ++F +
Sbjct: 244 LQTGSSLEEIDYSDMPDEDFSSSERANLKVVDSTKKGWIGFTGKYWMTTLIPD-NSAFKA 302

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
             KY  +G  RYQA+     I IL G+     + LFAGAKE+ TI HY     +  F   
Sbjct: 303 VSKYT-EGADRYQAEARQETIQILAGQRRDVQSRLFAGAKEYATIQHYGDKEGVTDFVDS 361

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           IDWG F+FI KPMF L+ +   L+GN G AI+  T+ +K + FPLA K +VS A MK +Q
Sbjct: 362 IDWGMFFFITKPMFALLHFLNGLIGNMGWAIIALTLIIKTILFPLAYKSFVSMARMKELQ 421

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P++++L+EK      Q +QKA +++Y+T  +NP AGC PILLQIP+FF++YKVI ++LE+
Sbjct: 422 PEMEKLKEKH-GEDRQAMQKATMEMYRTKKVNPAAGCLPILLQIPIFFSLYKVIFVTLEL 480

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKM 507
           RHAPF GW+KDL+  DP+++  LFG++P+  PG       + +G+WPI+M ++M++Q K+
Sbjct: 481 RHAPFIGWLKDLSVPDPSSLLNLFGLMPWDAPGPNSFFVILSIGVWPILMGITMWLQQKL 540

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
           +P P DK QAMI  WMP VF+F L  F +GL+IYW  +N ++ +QQ  IM+  G    ++
Sbjct: 541 NPAPTDKTQAMIFAWMPWVFMFMLGGFASGLVIYWVANNTLTFMQQYTIMRSQGVNPDIL 600

Query: 568 DRLRSTFSK 576
             +   F K
Sbjct: 601 GNMFKRFKK 609


>gi|85374954|ref|YP_459016.1| putative inner membrane protein translocase component YidC
           [Erythrobacter litoralis HTCC2594]
 gi|84788037|gb|ABC64219.1| preprotein translocase subunit [Erythrobacter litoralis HTCC2594]
          Length = 581

 Score =  411 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 196/571 (34%), Positives = 307/571 (53%), Gaps = 18/571 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNE------RKNIQTVKQPNQVD 50
           M+   N  +A+ L  +++  W      FY  P       E         +        +D
Sbjct: 1   MDNQRNLLLAVVLCGVLIIGWDAAMNYFYPQPAEPIEAVEGSPTVASAPVAGSSTAATLD 60

Query: 51  NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
           N  AA    + + AL+   R+ +  P + GSINL GA+ DD+ L+ +   V  +S  V +
Sbjct: 61  NGAAAQGPVELSDALATPERIRIDAPRVEGSINLVGARIDDIELKDHRATVDEDSGPVQM 120

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170
            +P NT   YFA+  +V     + LP S+TVW+   G+ LT   P+ L + N     F  
Sbjct: 121 FAPQNTDAQYFAQFGWV--GEGVSLPTSDTVWS-ADGETLTQGNPVTLSWDNGAGQQFRI 177

Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230
             S+D++Y+     T  N     +   P   I R     +T+T+    G + V GD +  
Sbjct: 178 RFSIDDNYMITAEQTAANTGGGPVVARPFATITRTSETASTDTWIAHSGPMGVFGDSADY 237

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
              Y D+      +      WLG SD Y+    +P  +    + F+    G   ++A   
Sbjct: 238 GPDYDDLADDGPYSGEGKARWLGFSDIYFLGALVPQADADPQTGFR--PIGENLFRADVI 295

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
               T+ PG  ++ T  LFAGAKE   +  Y +D  I +F + IDWGWF +  KP+  L+
Sbjct: 296 YQPATVAPGNEVSRTTQLFAGAKESEILDQY-EDAGIDKFGLAIDWGWFRWFEKPLLWLL 354

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
           +  ++LVGNFG+AI+L TV ++ L FP+A+KQ+ S A MK +QPK+  ++EK+K    Q 
Sbjct: 355 NQLFDLVGNFGVAIILLTVIIRGLLFPIAQKQFGSMAAMKAVQPKMKAIQEKYKDDK-QK 413

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
            Q+ ++ LYK   +NPLAGC P+L+QIP+FFA+YKV+ +++EMRH PF  WI+DL+A DP
Sbjct: 414 QQQEIMALYKEEKVNPLAGCLPLLIQIPIFFALYKVLILAIEMRHQPFALWIEDLSAPDP 473

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
            +IF LFG+LPF +PG + +G   +++ ++M++  +M+P   D  Q  I N MP V +F 
Sbjct: 474 AHIFNLFGLLPFEVPGLIAIGPLAVLLGVTMWLTFQMNP-VTDPIQRQIFNIMPWVLMFI 532

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           ++ F AGL++YW+ SNV+++ QQ  +   H 
Sbjct: 533 MAPFAAGLLLYWNTSNVLTLAQQRYLYSKHP 563


>gi|15603927|ref|NP_220442.1| putative inner membrane protein translocase component YidC
           [Rickettsia prowazekii str. Madrid E]
 gi|38503265|sp|Q9ZE97|OXAA_RICPR RecName: Full=Inner membrane protein oxaA
 gi|3860618|emb|CAA14519.1| 60 KD INNER-MEMBRANE PROTEIN (yidC) [Rickettsia prowazekii]
 gi|292571645|gb|ADE29560.1| Preprotein translocase subunit YidC [Rickettsia prowazekii Rp22]
          Length = 560

 Score =  410 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 241/562 (42%), Positives = 344/562 (61%), Gaps = 4/562 (0%)

Query: 1   MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           M  N  N   A+ LS+ I++ WQ F+V P  ++        ++     Q   + A    D
Sbjct: 1   MNNNIINLIAAVVLSLSIIFGWQYFFVKPEQKKQQQRIAMHKSENLNKQKLKALAEPASD 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
              Q  S   R+++++ SL GSI LKG +FDDL L+ Y  D+S NSP V L SP+NT+NA
Sbjct: 61  IAVQEASQVQRIKIESESLTGSIALKGLRFDDLILKKYKQDLSQNSPAVRLFSPANTENA 120

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           YFAE+  VS  N+++LPNSNTVWN    ++L+P  P+ L + N + I F  TI++D++YL
Sbjct: 121 YFAEIGLVSNLNSVKLPNSNTVWN-SDSEVLSPEKPVNLFWINEDGIKFLVTITVDKNYL 179

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           F I  T+ NNS  ++     G I R           + +G I  + +           +K
Sbjct: 180 FTIEQTIINNSDKELPVQSYGLINRKYISLEKAVNILHQGPIGCIDENLKEYSYDDIKDK 239

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILP 298
            S         W+GI+DKYW S  IP K + + S F Y L  G  RYQ  F +    I P
Sbjct: 240 KSTKFALSKVDWIGITDKYWLSSLIPDKSSRYSSNFNYALKQGTERYQVDFISPVQVIKP 299

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
           G++++  + +FAGAK+   +  YEK   I  F+  ID+GWFY I KP+F  M++FY  VG
Sbjct: 300 GENLSIKSRIFAGAKKVDLLDEYEKSYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVG 359

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           NFGI+I++ TV +KLL F LA K Y S   MKN+QP+ID ++  +       L + ++ L
Sbjct: 360 NFGISILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYNNDKA-RLNQEIMAL 418

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL++ DPT IF LFG
Sbjct: 419 YKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFFGWIKDLSSPDPTTIFNLFG 478

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
           +LPF  P F+ +G WPI+M+++MF+  KMSP  AD  QA ++ +MP++F+F  SSFP GL
Sbjct: 479 LLPFAPPSFLMIGAWPILMAITMFLHQKMSPELADPIQAQVMKFMPLIFLFMFSSFPVGL 538

Query: 539 IIYWSWSNVISIVQQAVIMKMH 560
           +IYWSW+N++SI+QQ  I K +
Sbjct: 539 LIYWSWNNILSIIQQYYINKFN 560


>gi|262277963|ref|ZP_06055756.1| 60 kDa inner membrane insertion protein [alpha proteobacterium
           HIMB114]
 gi|262225066|gb|EEY75525.1| 60 kDa inner membrane insertion protein [alpha proteobacterium
           HIMB114]
          Length = 560

 Score =  410 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 207/566 (36%), Positives = 326/566 (57%), Gaps = 10/566 (1%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD- 60
             N N   A+ LS  ++  WQ +Y  P  +  N E+   Q +K       S +   ++  
Sbjct: 1   MENKNVLAAVVLSTFVIMMWQFWYGEPVPQTQNQEQVQQQQLKGDKPSAPSISQKKVETK 60

Query: 61  --RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
             R+ A++   R++++N ++ GSI L GA  DD+ L+ Y+ D + +   V LL+P     
Sbjct: 61  LTRSDAINQGDRIKIENSAVEGSIALTGALIDDVTLKNYNQDNTGDQTKVILLNPKKYDQ 120

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
           AYF E  +  T+ N  +P++ T+W     K LTP TP++L + N   + F +  ++D+ Y
Sbjct: 121 AYFLETGWA-TSGNEIVPDNQTLWTAKGNKTLTPNTPVELEWNNGQGLTFIKKFTIDDQY 179

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
           L  I + + NNS   +      +I R +     + F + EG + ++ +    E    D  
Sbjct: 180 LITINEEIKNNSNQTVNLFHYAQITRQEKPEIQDFFILHEGLLGIVDETLTEE--DYDDI 237

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
                 F+ S  W+GI+DKYW +  IP K  +F ++F Y     + Y      +  TI  
Sbjct: 238 VEKKKTFNGSQGWVGITDKYWLTAIIPEKGKNFKAEFSYDKSFKSNYII---TDATTINV 294

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
            ++ +  + LF GAKE   I  Y       +F++ IDWGWF+F  KP+F ++ Y +   G
Sbjct: 295 NQTGSNISNLFIGAKEVSVIDGYTASNGFHKFDLAIDWGWFHFFTKPLFFIIDYLFKWCG 354

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           NFGIAI+L T  V+L+FFPLA   + S A MK +QP++  L++ +K+   Q +Q  M+ L
Sbjct: 355 NFGIAIILLTAGVRLIFFPLANYSFASMAKMKALQPEMQRLKDLYKEDK-QKIQMEMMNL 413

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NP++GC P++LQIP FFAIYK++ +++EMRHAPF+GWI+DL+AADPT+IF LFG
Sbjct: 414 YKREKVNPISGCLPVMLQIPFFFAIYKMLFVTIEMRHAPFYGWIQDLSAADPTSIFNLFG 473

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
           ++P+  PGF+ +G WPIIM ++M+IQ K++P P D  QA I  + P      L+SFP+GL
Sbjct: 474 LIPWDPPGFLIIGAWPIIMGVTMYIQQKLNPAPPDPIQAKIFMFFPFFLTILLASFPSGL 533

Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEI 564
           +IYWS +NV+++ QQ VI++    + 
Sbjct: 534 VIYWSVNNVLTMAQQYVIIRKTKVKT 559


>gi|103485502|ref|YP_615063.1| putative inner membrane protein translocase component YidC
           [Sphingopyxis alaskensis RB2256]
 gi|98975579|gb|ABF51730.1| 60 kDa inner membrane insertion protein [Sphingopyxis alaskensis
           RB2256]
          Length = 584

 Score =  408 bits (1049), Expect = e-112,   Method: Composition-based stats.
 Identities = 204/583 (34%), Positives = 313/583 (53%), Gaps = 27/583 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M+   N   AI LSV I+  W      F+  P   ++                     + 
Sbjct: 1   MDDKRNLIAAILLSVAILIGWNFVAERFFPTPDQPDVTKTVAGANGAPATAPTAQGQPSA 60

Query: 57  LID-------------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
           L                    L+   R+ ++ P++ GSINL GA+ DD+ L  Y   +  
Sbjct: 61  LPAPTAATPAAAQAIRPVDVVLAEGQRIPIETPAIRGSINLVGARIDDITLTKYRQTIKK 120

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
           +SP V L +P  T  AYFA L +  TA  I+LP + TVW   +G  LTPTTP+ L + N 
Sbjct: 121 DSPAVRLFAPGGTPAAYFASLGW--TAQGIQLPGAGTVWT-ANGTKLTPTTPVTLSWTNT 177

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT---NTFGVQEGF 220
               F    S+D +YL     TV N     +  S    I R    T     +++ +  G 
Sbjct: 178 TGQTFRIEYSIDANYLITAKQTVVNAGTAPVSLSSFALIDRLGKPTDPHEVDSWTIHVGP 237

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
              L  KS+ +  Y D+E++   +  + S  WLG +DKYW +  +P+K     +      
Sbjct: 238 TGYLDGKSVFDIDYDDLEEAPNRSVRYTSAGWLGFTDKYWLAAIVPAKGERVTAAISSP- 296

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
                YQ  F+ +   + PG+ +T T+ +FAGAKE   +  Y+ D  I R    IDWGWF
Sbjct: 297 -ATNNYQTLFARDFTQVAPGQQLTATSRIFAGAKEVEILETYQDDQGITRLSNAIDWGWF 355

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
            F   P+F L+ + +  VGNFG+AIM  T+ ++LL FP+A +Q+ S A M+ +QPK+  L
Sbjct: 356 EFFEVPIFKLLHWLFEKVGNFGLAIMALTLIIRLLMFPIANRQFSSMAQMRVVQPKMKAL 415

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +E++K   P  +Q+ +++LYK   INPLAGC PI++QIP+F+A+YKV+ +++EMRH PF 
Sbjct: 416 QERYKDDKP-RMQQELMKLYKDEKINPLAGCLPIVIQIPIFYALYKVLMLAIEMRHQPFI 474

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            WIKDL+A DP +I  LFG+LPF  P  + +G+  +I+ ++M++Q +++P PAD  QA +
Sbjct: 475 LWIKDLSAPDPLHILNLFGLLPFTPPSILAIGLLAVILGVTMWLQFRLNPAPADPVQAQV 534

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
              MP +F+F ++ F AGL++YW  +N++SI QQ  + +   A
Sbjct: 535 FKIMPWLFMFIMAPFAAGLLLYWITNNILSIGQQQWMYRKFPA 577


>gi|83859293|ref|ZP_00952814.1| putative inner membrane protein translocase component YidC
           [Oceanicaulis alexandrii HTCC2633]
 gi|83852740|gb|EAP90593.1| putative inner membrane protein translocase component YidC
           [Oceanicaulis alexandrii HTCC2633]
          Length = 672

 Score =  407 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 223/595 (37%), Positives = 347/595 (58%), Gaps = 23/595 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYP------RIEEMNNERKNIQTVKQPNQVDNSYA 54
           M  N N+ +A  +++ I++ +Q F + P        E+   E +  +T     Q  +S  
Sbjct: 1   MGENRNFLLAAVIAIGILFFYQAFILDPMARDREAAEQATAETQVQETGDDAPQATDSGF 60

Query: 55  AV----LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
           A         R  AL+ S R+E++  +L GS++L GA+ DDL L  Y  +V S  P VTL
Sbjct: 61  AAGLGENGMSREDALARSQRIEIRTEALSGSLSLTGARIDDLQLLRYETEVDSGVP-VTL 119

Query: 111 LSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           +SP       FA   ++  AN  + LP  +T W L+ G +LT TTP+ L     + + F 
Sbjct: 120 MSPEGFDGYQFAASGWLGGANAPQGLPGLSTNWTLVEGDVLTETTPVVLEHAAGD-LTFR 178

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKS 228
           RTIS+DE+YLF + DTV NN    +   P   + +H  P    N F + EG + V+    
Sbjct: 179 RTISVDENYLFTVNDTVINNGSAAVSLRPYALVRQHGVPADLQNFFVLHEGAVGVIDGTH 238

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQA 287
             ++K+   E   +   +    W+GI+ KYW +   P  + +  +QF+ +S      +++
Sbjct: 239 F-DRKFKKWEDEGLIERNGPGGWMGITSKYWLAAVAPEGQPNVRAQFRVVSRPDRPVFES 297

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + ++  T+ PG ++ +T+++FAGAK+ P +  YE DL I R  M IDWG F+F+ +P F
Sbjct: 298 NYLSDAETLAPGATLESTSYVFAGAKKQPILAAYENDLGIDRLTMAIDWGMFWFLTRPFF 357

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
             + +FY ++GN+G+AIM+ T+ +KL+ FPL  + + S A M++  PK+ E+RE++K   
Sbjct: 358 AALHFFYGVLGNYGLAIMVVTLLIKLVLFPLNNRAFASMAKMRSAAPKMTEIRERYKD-D 416

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
           PQ  QKAM++LY+   INP+AGC P+L QIP+FFA+YK + ISL+ RHAPF+GWI+D++A
Sbjct: 417 PQAQQKAMMELYRKERINPVAGCLPMLPQIPIFFALYKTVFISLDARHAPFFGWIQDMSA 476

Query: 468 ADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
            DPT I  LFG+LP+   G       + +G+WP++M ++M+ Q  ++PPPADK Q  I  
Sbjct: 477 PDPTMIGNLFGLLPYDPSGLPIVGPILAIGVWPLLMGVTMWAQQSLNPPPADKIQRQIFA 536

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
           +MPV+F   ++ FPA LIIYWSW+N ++I QQ +IM+  G    L        SK
Sbjct: 537 FMPVIFTIIMAPFPAALIIYWSWNNTLTIGQQYLIMRRQGVVTELDRNFFKLRSK 591


>gi|157825202|ref|YP_001492922.1| putative inner membrane protein translocase component YidC
           [Rickettsia akari str. Hartford]
 gi|166977406|sp|A8GLY9|OXAA_RICAH RecName: Full=Inner membrane protein oxaA
 gi|157799160|gb|ABV74414.1| putative inner membrane protein translocase component YidC
           [Rickettsia akari str. Hartford]
          Length = 560

 Score =  406 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 231/562 (41%), Positives = 343/562 (61%), Gaps = 4/562 (0%)

Query: 1   MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           M  N  N   AI LS+ I++ WQ F + P  ++   +    +      Q   +      D
Sbjct: 1   MNNNIINLIAAIVLSLSIIFGWQYFVIKPEQKKQQQQIAVQKAANLKKQQLKALVEPATD 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
              Q  S   R+++++ SL GSI+LKG +FDDL L+ Y  D+S NS  V L SP+NT+++
Sbjct: 61  IVVQEESQVQRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSSDVVLFSPTNTEHS 120

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           YFAE+  VS  ++++LPN++T+W+   G+IL+P  P+ L + N + + F  TI++D++YL
Sbjct: 121 YFAEIGLVSNLSSVKLPNNDTIWS-SDGEILSPEKPVNLFWVNEDGVKFLVTITVDKNYL 179

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           F I  T+ NNS  ++     G I R           + +G I  + +           +K
Sbjct: 180 FTIEQTIVNNSDKELPIQSYGLINRKYTAVEKAVNILHQGPIGCIDENLKEYSYDDIKDK 239

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILP 298
            S         W+GI+DKYW S  IP K +++ S F Y +  G  +YQ  F +    I P
Sbjct: 240 KSEKFAASKVDWIGITDKYWLSALIPDKSSNYSSNFNYAVKQGIEKYQVDFISPVQIIKP 299

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
           G++    + +FAGAK+   +  YEK   I  F+  ID+GWFY I KP+F  M++FY  VG
Sbjct: 300 GENFAIKSRIFAGAKKVDLLDQYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVG 359

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           NFG++I++ TV +KLL F LA K Y S   +KN+QP+ID ++  +       L + ++ L
Sbjct: 360 NFGVSILIVTVIIKLLMFTLANKSYRSMKKIKNLQPEIDRIKNLYSDDKA-RLNQEIMAL 418

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NP+AGC PIL+QIPVFF+IYKV+ +++EMR A F+GWIKDL+A DPT IF LFG
Sbjct: 419 YKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAQFYGWIKDLSAPDPTTIFNLFG 478

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
           +LPF  P F+ +G WPI+M+++MF+Q KMSP PAD  QA ++ +MP++F+F  SSFP GL
Sbjct: 479 LLPFSPPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGL 538

Query: 539 IIYWSWSNVISIVQQAVIMKMH 560
           +IYWSW+N++SI+QQ  I K +
Sbjct: 539 LIYWSWNNILSIIQQYYINKFN 560


>gi|16125020|ref|NP_419584.1| putative inner membrane protein translocase component YidC
           [Caulobacter crescentus CB15]
 gi|221233743|ref|YP_002516179.1| inner membrane protein translocase component YidC [Caulobacter
           crescentus NA1000]
 gi|38503160|sp|Q9AA40|OXAA_CAUCR RecName: Full=Inner membrane protein oxaA
 gi|254772763|sp|B8H1E8|OXAA_CAUCN RecName: Full=Inner membrane protein oxaA
 gi|13422004|gb|AAK22752.1| 60 kd inner-membrane protein [Caulobacter crescentus CB15]
 gi|220962915|gb|ACL94271.1| inner membrane protein translocase component yidC [Caulobacter
           crescentus NA1000]
          Length = 615

 Score =  406 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 213/614 (34%), Positives = 330/614 (53%), Gaps = 37/614 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV-------DNSYA 54
             N N  + I  +  I+  +Q F + P+ ++   E +  +  +Q +          N   
Sbjct: 3   NDNKNTLMFIVSAFAILIGYQFFVLGPQQKKAEAEFRAKKAAEQQSAAKAGVTLDANGNP 62

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
           A L   R  A ++SPR+E+  P+L GSI LKGA+ DDL LR Y      +SP V L  P 
Sbjct: 63  APLRLSRDAAKALSPRIEVDTPALSGSIALKGARIDDLFLRKYDETTKKDSPPVELFRPE 122

Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174
             ++A+FA+  +   AN   LP+S TVW    G++L P +P+ L + N   + F R I++
Sbjct: 123 GAEHAWFADFGWAG-ANLPGLPDSRTVWTAAPGQVLRPNSPVTLTYDNGLGLTFTRVIAV 181

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT----FGVQEGFIAVLGDKSLV 230
           D+  +F + D+V NN  + ++ +P   + R     A            G +    ++ L 
Sbjct: 182 DDQAMFTVTDSVKNNGTNGLQLAPYATVQRQGISDALGKNQIVHEGAIGVLGATDEQKLE 241

Query: 231 EQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAK 288
             KY   +K   + +F     W GI+DKYW +  IP +  +  +Q++  +  G   Y   
Sbjct: 242 MAKYGKWKKDKPLQSFDSVGGWTGITDKYWLAALIPGQNQAIKAQYRVTNVAGIDVYDVN 301

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------------IPRFEML 333
           F      + PG +++ T  LFAGAK  P +  YE                   IPRF+  
Sbjct: 302 FLGPVQVLNPGATVSQTTRLFAGAKTVPLLRKYEYGATPAPAIWEFWNKTKAEIPRFDDA 361

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +DWG F F  +P+F ++  FY LVGNFG+AI+L TV +KL+ +P+A K Y S A MK I 
Sbjct: 362 VDWGMFRFFTRPIFNILEVFYKLVGNFGLAILLLTVVLKLVLYPMADKSYESMAKMKKIA 421

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P++++L+ K K  P +  Q+ M+ LY+   INP+ GC P+L+QIPVF+A+YKV+++++EM
Sbjct: 422 PEVEKLKAKHKDDPAK-QQQEMMALYQKEKINPMMGCLPMLIQIPVFYALYKVLTVTIEM 480

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-------IWPIIMSLSMFIQMK 506
           RHAPF+GWI+DL+A DPT +F LFG++P+       +G       +WP++   +M++   
Sbjct: 481 RHAPFFGWIQDLSAPDPTTMFNLFGLIPWDPGSLPLIGAMIAHLGVWPLLYGFTMWLTTA 540

Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           M+PP  D  Q  I  W PV+F F LS F  GL+IYW WSNV++I QQ +IM+ +  E  +
Sbjct: 541 MNPPAGDPIQQKIFQWFPVIFTFTLSGFAVGLVIYWCWSNVLTIFQQYIIMRRYKVENPI 600

Query: 567 IDRLRSTFSKNYNS 580
              +     K   +
Sbjct: 601 DQIIARLRGKTAGA 614


>gi|304322173|ref|YP_003855816.1| 60 kDa inner membrane insertion protein [Parvularcula bermudensis
           HTCC2503]
 gi|303301075|gb|ADM10674.1| 60 kDa inner membrane insertion protein [Parvularcula bermudensis
           HTCC2503]
          Length = 589

 Score =  405 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 192/594 (32%), Positives = 327/594 (55%), Gaps = 24/594 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID- 59
           M+   N  +A+ LS ++++ ++   + P+       ++  Q +              +  
Sbjct: 1   MD--RNVIIALVLSTLLLFGYEALVLGPKRAAYLEAQEKAQAIAAEQMDPADAGETFLPG 58

Query: 60  -----DRAQALSMS-PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
                 R QAL+    R+ ++ P+L GS+NL+G  FDDL L+ Y   ++++SP + LLSP
Sbjct: 59  TERSLSREQALAEGTARLPIETPTLSGSVNLEGLLFDDLILKTYRATLAADSPPIVLLSP 118

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
                  F             + +    W    G +LTP TP  +V +   +I +  T++
Sbjct: 119 RTATTPQFMRAGLSIGG----VSDRTARWQAPEGAVLTPKTP-VIVTRQEGDIQYRATLA 173

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVEQ 232
           +DE ++F++   VTN S + +   P G   +   P    N   + EG I V+    L+++
Sbjct: 174 VDEQFMFRVTYEVTNGSGETVVAQPYGAAYQRGIPADLQNFMILFEGPIGVVDH-RLMDR 232

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
           KY  +          S  W+GI+DKYW S  IP ++T F ++          ++A +   
Sbjct: 233 KYKKLLSGGGIEDRGSGGWVGITDKYWLSAAIPPQDTPFKAELDVTDGAIPLFRASYLLE 292

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
             +I PG +I T  +L+ G+KE   +  Y+  L I RF   +DWG F F+ +P+F ++++
Sbjct: 293 TQSIAPGATIRTEAYLYGGSKEVEVLRMYQDQLGIDRFVWAVDWGHFSFLTRPIFGILAF 352

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
           F  L GN+G+AI+L T+ +K + FPLA   Y S A MK +QP++ ++RE++     +  Q
Sbjct: 353 FEGLTGNWGVAILLLTLVIKAVLFPLANMSYKSMAGMKKVQPELMKIRERYTDDKTK-QQ 411

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           + M+ LYK H INP AGC P+L Q+P+F+A+YK + +++E+RH P + +I DL+  DPT+
Sbjct: 412 QEMMALYKKHKINPAAGCLPVLAQMPIFYALYKTLFVTIELRHEP-FLYIPDLSEQDPTS 470

Query: 473 IFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
           +F LFG+LPF          F+ +GI P++M  +MF+Q+K++PPP D  Q MI   MP++
Sbjct: 471 VFNLFGLLPFDPTTVPLIGSFLGIGILPLLMGAAMFVQLKLNPPPPDPTQRMIFGLMPLI 530

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           F+F  + F AGL++YW W+  +S++QQ +IMK  GA++ ++  ++ +F K   +
Sbjct: 531 FMFIFAPFAAGLVLYWFWNTFLSVIQQYIIMKRQGADVDILGNIKQSFGKAPQA 584


>gi|238650515|ref|YP_002916367.1| putative inner membrane protein translocase component YidC
           [Rickettsia peacockii str. Rustic]
 gi|259515722|sp|C4K168|OXAA_RICPU RecName: Full=Inner membrane protein oxaA
 gi|238624613|gb|ACR47319.1| putative inner membrane protein translocase component YidC
           [Rickettsia peacockii str. Rustic]
          Length = 560

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 232/548 (42%), Positives = 338/548 (61%), Gaps = 3/548 (0%)

Query: 14  SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73
           S+ I++ WQ F V P  ++   +    +      Q   +          Q  S   R+++
Sbjct: 15  SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATGIVVQEESQVQRIKI 74

Query: 74  KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133
           ++ SL GS++LKG +FDDL L+ Y  D+S NSP V L SP+NT+NAYFAE+  VS  +++
Sbjct: 75  ESESLTGSVSLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSNLSSV 134

Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193
           +LPN++T+WN    +IL+P  P+ L + N + + F  TI++DE+YLF I  T+ NNS  +
Sbjct: 135 KLPNNDTIWN-SDSEILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193

Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253
           +     G I R           + +G I  + +           +K S         W+G
Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFAASKVDWIG 253

Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312
           I+DKYW S  IP K +++ S F Y L  G  RYQ  F +    I PG++ +  + +FAGA
Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENFSIKSRIFAGA 313

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
           K+   +  YEK   I  F+  ID+GWFY I KP+F  M++FY  VGNFG++I++ TV +K
Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432
           LL F LA K Y S   MKN+QP+ID ++  +       L + ++ LYK   +NP+AGC P
Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF  P F+ +G 
Sbjct: 433 ILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPFSPPSFLMIGA 492

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           WPI+M+++MF+Q KMSP PAD  QA ++ +MP++F+F  SSFP GL+IYWSW+N++SI+Q
Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552

Query: 553 QAVIMKMH 560
           Q  I K +
Sbjct: 553 QYYINKFN 560


>gi|157827949|ref|YP_001494191.1| putative inner membrane protein translocase component YidC
           [Rickettsia rickettsii str. 'Sheila Smith']
 gi|166977410|sp|A8GQK8|OXAA_RICRS RecName: Full=Inner membrane protein oxaA
 gi|157800430|gb|ABV75683.1| putative inner membrane protein translocase component YidC
           [Rickettsia rickettsii str. 'Sheila Smith']
          Length = 560

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 234/548 (42%), Positives = 338/548 (61%), Gaps = 3/548 (0%)

Query: 14  SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73
           S+ I++ WQ F V P  ++   +    +      Q   +          Q  S   R+++
Sbjct: 15  SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATGIVVQEESQVQRIKI 74

Query: 74  KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133
           ++ SL GSI+LKG +FDDL L+ Y  D+S NSP V L SP+NT+NAYFAE+  VS  +++
Sbjct: 75  ESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSNLSSV 134

Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193
           +LPN++T+WN    +IL+P  P+ L + N + + F  TI++DE+YLF I  T+ NNS  +
Sbjct: 135 KLPNNDTIWN-SDSEILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193

Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253
           +     G I R           + +G I  + +           +K S         W+G
Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFAASKVDWIG 253

Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312
           I+DKYW S  IP K +++ S F Y L  G  RYQ  F +    I PGK+ +  + +FAGA
Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGIERYQVDFISPVQIIKPGKNFSIKSRIFAGA 313

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
           K+   +  YEK   I  F+  ID+GWFY I KP+F  M++FY  VGNFG++I++ TV +K
Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432
           LL F LA K Y S   MKN+QP+ID ++  +       L + ++ LYK   +NP+AGC P
Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF  P F+ +G 
Sbjct: 433 ILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPFAPPSFLMIGA 492

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           WPI+M+++MF+Q KMSP PAD  QA ++ +MP++F+F  SSFP GL+IYWSW+N++SI+Q
Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552

Query: 553 QAVIMKMH 560
           Q  I K +
Sbjct: 553 QYYINKFN 560


>gi|121602508|ref|YP_989323.1| putative inner membrane protein translocase component YidC
           [Bartonella bacilliformis KC583]
 gi|120614685|gb|ABM45286.1| inner membrane protein, 60Kd [Bartonella bacilliformis KC583]
          Length = 612

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 259/610 (42%), Positives = 372/610 (60%), Gaps = 30/610 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME N N+F+AI LS+II  AW   Y+ P+ E + N +   Q   + N    +Y A   ++
Sbjct: 1   MEYNRNFFIAIGLSLIIFVAWHFLYIVPQHENLKNAQTIEQQALKQNPASPTYDADFSNN 60

Query: 61  ------------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
                             R   L+ + R+ +K   L GSINL GAQFDDL L+ YHL V 
Sbjct: 61  AQTNQSRLTADRSMTPEIRRAELAKTDRITIKTDELEGSINLVGAQFDDLFLKKYHLTVD 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLIS-GKILTPTTPIKLVF 160
             SP ++LL+P+  K +Y AE  + S++   + LP SNT W + S   ILTP+TP+ LV+
Sbjct: 121 KTSPQISLLNPNGFKTSYLAEFGFTSSSLPEKALPQSNTQWQIESENTILTPSTPVTLVY 180

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
            N    +F RTIS+D+HY+F I D++ N S + +  S   R+ R  P        +    
Sbjct: 181 NNGQGQIFRRTISIDDHYMFTIEDSINNESDNPVHLSSYARVARAAPPEHAQATYLLHEG 240

Query: 221 IAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
           +  +   SL  + Y          +  + S++    +  W+GI+DKYWA   IPS+   +
Sbjct: 241 MIGIAGNSLKTETYEALSELTLNPEDGQKSLTFQKVTGGWIGITDKYWAVAVIPSQNQEY 300

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            S+F Y    +  YQ+   +  ++I P ++ T  N+LFAGAK    I+ Y+  L I +F 
Sbjct: 301 TSRFVYFDRLNTHYQSDLQSALLSIAPRETKTIINYLFAGAKRVEIINQYQNQLQIKKFG 360

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           +LIDWGWF FI KPMF L+   Y   GNFGIAI+LTTV +K L FPLA K Y+S A MK 
Sbjct: 361 LLIDWGWFDFITKPMFSLIHILYEQTGNFGIAILLTTVLLKTLLFPLANKSYISMARMKI 420

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           IQP + E++EK+ +   +    A+IQLYKT  INPLAGC P+L+Q P+FFA+YKV+ I+L
Sbjct: 421 IQPMMQEIKEKYAEDRVKQQH-AIIQLYKTQKINPLAGCLPMLIQFPIFFALYKVLYITL 479

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           EMRHAPF+GWI+DLAA DPT+IF LFG LP+ +P F  +G WP++M ++MF+QM+M+PPP
Sbjct: 480 EMRHAPFFGWIQDLAAPDPTSIFNLFGFLPYAVPAFFVIGAWPLVMGITMFLQMQMNPPP 539

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
            D  QA +  W+P++F F L+SFPAGL+IYW+W+N +SI+QQ++IMK  G +I L + ++
Sbjct: 540 VDPIQATLFAWLPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSIIMKRQGVKIELFNNIK 599

Query: 572 STFSKNYNSQ 581
           + + K    +
Sbjct: 600 TIWQKAPKKE 609


>gi|34580968|ref|ZP_00142448.1| 60 kD inner-membrane protein [Rickettsia sibirica 246]
 gi|28262353|gb|EAA25857.1| 60 kD inner-membrane protein [Rickettsia sibirica 246]
          Length = 560

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 234/548 (42%), Positives = 340/548 (62%), Gaps = 3/548 (0%)

Query: 14  SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73
           S+ I++ WQ F V P  ++   +    +      Q   +          QA S   R+++
Sbjct: 15  SLSIIFGWQYFVVKPEQKKQQQQITVQKAENLKKQQLKALVEPATGIVVQAESQVQRIKI 74

Query: 74  KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133
           ++ SL GSI+LKG +FDDL L+ Y  D+S NSP V L SP+NT+NAYFAE+  VS  +++
Sbjct: 75  ESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSNLSSV 134

Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193
           +LPN++T+WN    +IL+P  P+ L + N + + F  TI++DE+YLF I  T+ NNS  +
Sbjct: 135 KLPNNDTIWN-SDSEILSPEKPVHLFWVNEDGVKFLVTIAVDENYLFTIEQTIVNNSNKE 193

Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253
           +     G I R           + +G I  + +           +K S         W+G
Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFAASKVDWIG 253

Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312
           I+DKYW S  IP K +++ S F Y L  G  RYQ  F +    I PG++ +  + +FAGA
Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENFSIKSRIFAGA 313

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
           K+   +  YEK   I  F+  ID+GWFY I KP+F  M++FY  VGNFG++I++ TV +K
Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432
           LL F LA K Y S   MKN+QP+ID ++  +       L + ++ LYK   +NP+AGC P
Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A+DPT IF LFG+LPF  P F+ +G 
Sbjct: 433 ILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSASDPTTIFNLFGLLPFSPPSFLMIGA 492

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           WPI+M+++MF+Q KMSP PAD  QA ++ +MP++F+F  SSFP GL+IYWSW+N++SI+Q
Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552

Query: 553 QAVIMKMH 560
           Q  I K +
Sbjct: 553 QYYINKFN 560


>gi|229586285|ref|YP_002844786.1| putative inner membrane protein translocase component YidC
           [Rickettsia africae ESF-5]
 gi|259515719|sp|C3PM83|OXAA_RICAE RecName: Full=Membrane protein oxaA
 gi|228021335|gb|ACP53043.1| Preprotein translocase subunit YidC [Rickettsia africae ESF-5]
          Length = 560

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 233/548 (42%), Positives = 338/548 (61%), Gaps = 3/548 (0%)

Query: 14  SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73
           S+ I++ WQ F V P  ++   +    +      Q   +          Q  S   R+++
Sbjct: 15  SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKAVVEPATGIVVQEESQVQRIKI 74

Query: 74  KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133
           ++ SL GSI+LKG +FDDL L+ Y  D+S NSP V L SP+NT+NAYFAE+  VS  +++
Sbjct: 75  ESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSNLSSV 134

Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193
           +LPN++T+WN    +IL+P  P+ L + N + + F  TI++DE+YLF I  T+ NNS  +
Sbjct: 135 KLPNNDTIWN-SDSEILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193

Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253
           +     G I R           + +G I  + +           +K S         W+G
Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFVASKVDWIG 253

Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312
           I+DKYW S  IP K +++ S F Y L  G  RYQ  F +    I PG+  +  + +FAGA
Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGEDFSIKSRIFAGA 313

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
           K+   +  YEK   I  F+  ID+GWFY I KP+F  M++FY  VGNFG++I++ TV +K
Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432
           LL F LA K Y S   MKN+QP+ID ++  +       L + ++ LYK   +NP+AGC P
Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A+DPT IF LFG+LPF  P F+ +G 
Sbjct: 433 ILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSASDPTTIFNLFGLLPFSPPLFLMIGA 492

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           WPI+M+++MF+Q KMSP PAD  QA ++ +MP++F+F  SSFP GL+IYWSW+N++SI+Q
Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552

Query: 553 QAVIMKMH 560
           Q  I K +
Sbjct: 553 QYYINKFN 560


>gi|15891997|ref|NP_359711.1| putative inner membrane protein translocase component YidC
           [Rickettsia conorii str. Malish 7]
 gi|38503126|sp|Q92JJ3|OXAA_RICCN RecName: Full=Inner membrane protein oxaA
 gi|15619112|gb|AAL02612.1| 60 kD inner-membrane protein [Rickettsia conorii str. Malish 7]
          Length = 560

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 233/548 (42%), Positives = 339/548 (61%), Gaps = 3/548 (0%)

Query: 14  SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73
           S+ I++ WQ F V P  ++   +    +      Q   +          Q  S   R+++
Sbjct: 15  SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATGIVVQEESQVQRIKI 74

Query: 74  KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133
           ++ SL GSI+LKG +FDDL L+ Y  D+S NSP V L SP+NT+NAYFAE+  VS  +++
Sbjct: 75  ESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSNLSSV 134

Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193
           +LPN++T+WN    +IL+P  P+ L + N + + F  TI++DE+YLF I  T+ NNS  +
Sbjct: 135 KLPNNDTIWN-SDSEILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193

Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253
           +     G I R           + +G I  + +           +K S         W+G
Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFAASKVDWIG 253

Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312
           I+DKYW S  IP K +++ S F Y L  G  RYQ  F +    I PG++ +  + +FAGA
Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENFSIKSRIFAGA 313

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
           K+   +  YEK   I  F+  ID+GWFY I KP+F  M++FY  VGNFG++I++ TV +K
Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432
           LL F LA K Y S   MKN+QP+ID ++  +       L + ++ LYK   +NP+AGC P
Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A+DPT IF LFG+LPF  P F+ +G 
Sbjct: 433 ILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSASDPTTIFNLFGLLPFSPPSFLMIGA 492

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           WPI+M+++MF+Q KMSP PAD  QA ++ +MP++F+F  SSFP GL+IYWSW+N++SI+Q
Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552

Query: 553 QAVIMKMH 560
           Q  I K +
Sbjct: 553 QYYINKFN 560


>gi|239946952|ref|ZP_04698705.1| inner membrane protein OxaA [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921228|gb|EER21252.1| inner membrane protein OxaA [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 560

 Score =  403 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 233/548 (42%), Positives = 339/548 (61%), Gaps = 3/548 (0%)

Query: 14  SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73
           S+ I++ WQ F V P  ++   +    +      Q   +      D   Q  +   R+++
Sbjct: 15  SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATDIVVQEENQVQRIKI 74

Query: 74  KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133
           ++ SL GSI+LKG +FDDL L+ Y  D+S NSP V L SP+NT+NAYFAE+  VS  +++
Sbjct: 75  ESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEIGLVSNLSSV 134

Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193
           +LPN++T+WN  S +IL+P   + L + N + + F  TI++DE+YLF I  T+ NNS  +
Sbjct: 135 KLPNNDTIWNSNS-EILSPEKSVNLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193

Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253
           +     G I R           + +G I  + +           +K S         W+G
Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFAAGKVDWIG 253

Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312
           I+DKYW S  IP K +++ S F Y L  G  RYQ  F +    I PG++ +  + +FAGA
Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGAERYQVDFISPVQIIKPGENFSIKSRIFAGA 313

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
           K+   +  YEK   I  F+  ID+GWFY I KP+F  M++FY  VGNFG++I++ TV +K
Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432
           LL F LA K Y S   MKN+QP+ID ++  +       L + ++ LYK   +NP+AGC P
Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF  P F+ +G 
Sbjct: 433 ILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPFLPPSFLMIGA 492

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           WPI+M+++MF+Q KMSP PAD  QA ++ +MP++F+F  SSFP GL+IYWSW+N++SI+Q
Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552

Query: 553 QAVIMKMH 560
           Q  I K +
Sbjct: 553 QYYINKFN 560


>gi|51473293|ref|YP_067050.1| putative inner membrane protein translocase component YidC
           [Rickettsia typhi str. Wilmington]
 gi|81692326|sp|Q68XS4|OXAA_RICTY RecName: Full=Inner membrane protein oxaA
 gi|51459605|gb|AAU03568.1| 60 kDa inner membrane protein [Rickettsia typhi str. Wilmington]
          Length = 558

 Score =  402 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 238/562 (42%), Positives = 344/562 (61%), Gaps = 6/562 (1%)

Query: 1   MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           M  N  N   AI LS+ I++ WQ F + P  ++        ++     Q   + A    +
Sbjct: 1   MNNNIINLIAAIVLSLSIIFGWQYFVIKPEQKKQQQRMAIYKSENLKKQ--KALAEHTSN 58

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
              Q      R+++++ SL GSI LKG +FDDL L+ Y  D+S NSP V L SP+NT+NA
Sbjct: 59  ITVQEAGQVQRIKIESESLTGSIALKGLRFDDLILKKYKQDLSQNSPAVRLFSPANTENA 118

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           YFAE+  VS  ++++LPNSNTVWN    ++L+P  P+ L + N + I F  TI++D++YL
Sbjct: 119 YFAEIGLVSNLSSVKLPNSNTVWN-SDSEVLSPEKPVNLFWVNEDGIKFLVTITVDKNYL 177

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           F I  T+ NNS  ++     G I R           + +G I  + +           ++
Sbjct: 178 FTIEQTIINNSDKELPVQAYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDQ 237

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILP 298
            S         W+GI+DKYW S  IP K +S+ + F Y L  G  RYQ  F +    I P
Sbjct: 238 KSAKFALSKVDWIGIADKYWLSSLIPDKSSSYSANFNYALKQGAERYQVDFISPVQVIKP 297

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
           GK+++  + +FAGAK+   +  YEK   I  F+  ID+GWFY I KP+F  M++FY  VG
Sbjct: 298 GKNLSIKSRIFAGAKKVDLLDEYEKSYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVG 357

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           NFG++I++ TV +KLL F LA K Y S   MKN+QP+ID ++  +       L + ++ L
Sbjct: 358 NFGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYNNDKA-RLNQEIMAL 416

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NP+AGC PIL+QIPVFF+IYKV+ +++EMRHAPF+GWIKDL++ DPT IF LFG
Sbjct: 417 YKKSKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRHAPFYGWIKDLSSPDPTTIFNLFG 476

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
           +LPF  P F+ +G WPI+M+++MF+  KMSP  AD  QA ++ +MP++F+F  SSFP GL
Sbjct: 477 LLPFAPPSFLMIGAWPILMAITMFLHQKMSPELADPIQAQVMKFMPLIFLFMFSSFPVGL 536

Query: 539 IIYWSWSNVISIVQQAVIMKMH 560
           +IYWSW+N++SI+QQ  I K +
Sbjct: 537 LIYWSWNNILSIIQQYYINKFN 558


>gi|165932637|ref|YP_001649426.1| membrane protein insertase [Rickettsia rickettsii str. Iowa]
 gi|189036358|sp|B0BVZ4|OXAA_RICRO RecName: Full=Inner membrane protein oxaA
 gi|165907724|gb|ABY72020.1| 60 kDa inner membrane protein [Rickettsia rickettsii str. Iowa]
          Length = 560

 Score =  402 bits (1031), Expect = e-109,   Method: Composition-based stats.
 Identities = 233/548 (42%), Positives = 337/548 (61%), Gaps = 3/548 (0%)

Query: 14  SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73
           S+ I++ WQ F V P  ++   +    +      Q   +          Q  S   R+++
Sbjct: 15  SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATGIVVQEESQVQRIKI 74

Query: 74  KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133
           ++ SL GSI+LKG +FDDL L+ Y  D+S NS  V L SP+NT+NAYFAE+  VS  +++
Sbjct: 75  ESESLTGSISLKGLRFDDLILKKYKQDLSKNSSEVRLFSPANTENAYFAEVGLVSNLSSV 134

Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193
           +LPN++T+WN    +IL+P  P+ L + N + + F  TI++DE+YLF I  T+ NNS  +
Sbjct: 135 KLPNNDTIWN-SDSEILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193

Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253
           +     G I R           + +G I  + +           +K S         W+G
Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFAASKVDWIG 253

Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312
           I+DKYW S  IP K +++ S F Y L  G  RYQ  F +    I PGK+ +  + +FAGA
Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGIERYQVDFISPVQIIKPGKNFSIKSRIFAGA 313

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
           K+   +  YEK   I  F+  ID+GWFY I KP+F  M++FY  VGNFG++I++ TV +K
Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432
           LL F LA K Y S   MKN+QP+ID ++  +       L + ++ LYK   +NP+AGC P
Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF  P F+ +G 
Sbjct: 433 ILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPFAPPSFLMIGA 492

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           WPI+M+++MF+Q KMSP PAD  QA ++ +MP++F+F  SSFP GL+IYWSW+N++SI+Q
Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552

Query: 553 QAVIMKMH 560
           Q  I K +
Sbjct: 553 QYYINKFN 560


>gi|67458523|ref|YP_246147.1| putative inner membrane protein translocase component YidC
           [Rickettsia felis URRWXCal2]
 gi|75537010|sp|Q4UN76|OXAA_RICFE RecName: Full=Inner membrane protein oxaA
 gi|67004056|gb|AAY60982.1| Preprotein translocase subunit YidC [Rickettsia felis URRWXCal2]
          Length = 560

 Score =  401 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 232/548 (42%), Positives = 339/548 (61%), Gaps = 3/548 (0%)

Query: 14  SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73
           S+ I++ WQ F V P  ++   +    +      Q   +      D   Q  S   R+++
Sbjct: 15  SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATDIVVQEESGVQRIKI 74

Query: 74  KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133
           ++ SL GSI+LKG +FDDL L+ Y  D+S+NSP V L SP+NT+NAYFAE+  VS  +++
Sbjct: 75  ESESLTGSISLKGLRFDDLILKKYKQDLSNNSPEVRLFSPANTENAYFAEIGLVSNLSSV 134

Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193
           +LPN++T+WN    +IL+P  P+ L + N + + F  TI++DE+YLF I  T+ NNS  +
Sbjct: 135 KLPNNDTIWN-SDSEILSPEKPVNLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193

Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253
           +     G I R           + +G I  + +           +K S         W+G
Sbjct: 194 LPIQSYGLINRKYTAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFAASKVDWIG 253

Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312
           I+DKYW S  IP K +++ S F Y L  G  RYQ  F +    I PG++ +  + +FAGA
Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENFSIKSRIFAGA 313

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
           K+   +  YEK   I  F+  ID+GWFY I KP+F  M++FY  VGNFG++I++ TV +K
Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432
           LL F LA K Y S   MKN+QP+ID ++  +       L + ++ LYK   +NP+AGC P
Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+QIP+FF+IYKV+ +++EMR  PF+GWIKDL+A DPT IF LFG+LPF  P F+ +G 
Sbjct: 433 ILVQIPLFFSIYKVLYVTIEMRQVPFYGWIKDLSAPDPTTIFNLFGLLPFSPPSFLMIGA 492

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           WPI+M+++MF+Q KMSP PAD  QA ++ +MP++F+F  SSFP GL+IYWSW+N++SI+Q
Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552

Query: 553 QAVIMKMH 560
           Q  I K +
Sbjct: 553 QYYINKFN 560


>gi|319406774|emb|CBI80407.1| translocase precursor subunit [Bartonella sp. 1-1C]
          Length = 612

 Score =  399 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 252/610 (41%), Positives = 363/610 (59%), Gaps = 30/610 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------T 42
           ME N N+F+AI LS ++  AW   Y+ P+  ++   +   Q                   
Sbjct: 1   MEYNRNFFIAIGLSFVVFVAWHFLYIVPQQAKLQESKITTQKLSNHNAALPTNDPYFSHN 60

Query: 43  VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
               + V  +   +  + R   L+ + RV +K   L GSINL G +FDDL L+ Y L V 
Sbjct: 61  ASTDDTVPVANRPITPEVRKAELAKTNRVLIKTNELEGSINLVGGKFDDLLLKKYRLKVD 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKIL-TPTTPIKLVF 160
             SP + LL+P+     YFAE  + S++   + LP SNT W L       TP+TPI LV+
Sbjct: 121 KKSPEIILLNPNGLPTTYFAEFGFTSSSLPAQALPQSNTKWQLEGDNTTLTPSTPITLVY 180

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
            N    +F RT S+DEHY+F I D+++N S   +  S   RI R  P   TN   +    
Sbjct: 181 NNGQGQIFHRTFSVDEHYMFTIKDSISNESSSPVYLSSYARIARAAPPEDTNATYLLHEG 240

Query: 221 IAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
           +  +   SL  +KY             + S+   + +  W+GI+DKYWA   IP ++T +
Sbjct: 241 MIGIAGDSLKTEKYTALAELSPNPQNGQKSVIFPNITRGWIGITDKYWAVAVIPPQDTEY 300

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            S+F Y    +  YQ+   +  +T+ P ++ T TN LFAGAK    I+HY+  L I +F 
Sbjct: 301 TSRFVYFDRLNTHYQSDLQSALLTVPPHETKTITNRLFAGAKRVEIINHYQNQLKINKFS 360

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           +LIDWGWF FI KPMF L+   Y    NFG+AI+L TV +K+L FPLA K Y S A +K 
Sbjct: 361 LLIDWGWFDFITKPMFALIDILYKYTENFGVAILLITVLLKILLFPLAHKSYKSIARLKV 420

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           IQP + E++EK+     +  Q+A+I+LYKT  INP AGCWPIL+Q P+FFA+YKV+ I++
Sbjct: 421 IQPMMLEIKEKYADDRNK-QQQAIIELYKTKKINPFAGCWPILIQFPIFFALYKVLYITI 479

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P P
Sbjct: 480 EMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYAVPTFLILGAWPLIMGITMFLQMQMNPLP 539

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
            D  Q ++  WMP++F   L+SFPAGL+IYW+W+N++SI+QQ++IMK  G +I   D L+
Sbjct: 540 QDPTQVVVFRWMPIIFTIMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKIEFFDNLK 599

Query: 572 STFSKNYNSQ 581
           +   K+   +
Sbjct: 600 AIVQKDSKKE 609


>gi|302381828|ref|YP_003817651.1| membrane protein insertase, YidC/Oxa1 family [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302192456|gb|ADL00028.1| membrane protein insertase, YidC/Oxa1 family [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 614

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 219/613 (35%), Positives = 336/613 (54%), Gaps = 37/613 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------PN 47
           E   N  +   ++ II+  +Q F + P+ E+    ++      Q              P 
Sbjct: 4   ENTRNMVIFAVMTAIILIVYQIFVMGPQAEQRRAAQEAAAAQAQEQQAAAAGTPTAGIPA 63

Query: 48  QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
               +     + DR +AL    R+ +  P+L GS++L+G + DDL L+ Y   +   SP 
Sbjct: 64  STGATGPVTFVTDRTKALGNVARIPVSTPTLQGSMSLQGGRIDDLFLKNYRQTIDPTSPY 123

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167
             L  P   ++AYFA+  +        +P +NTVW L +G  LTP TP+ L + N   + 
Sbjct: 124 EELFRPQGMEHAYFAQFGWTGPNVPGGVPGANTVWRLTAGSTLTPATPVTLTWDNGQGLR 183

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGD 226
           F R +S+D+ Y+F + DTV N     I  +P GR+ R   P     T  + EG I     
Sbjct: 184 FTRVLSVDDRYMFTVTDTVANLGTAPITIAPYGRVERQGVPPALGKTQILHEGGIGTFSK 243

Query: 227 KS---LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG-H 282
                  + KY D  K        +  WLGI+DKYW +  IP ++ +  ++F+      +
Sbjct: 244 GDGYVTSQLKYGDWAKKPRQEHESTGGWLGITDKYWMAALIPPQDEAIQAEFRVTDAATY 303

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             ++A+      TI PG+ +T    LFAGAK    +  YEK   +PRF   IDWG+ +F+
Sbjct: 304 DIHEARMLGAARTIQPGRQVTEVQHLFAGAKRNEILADYEKQFDLPRFIYAIDWGFLFFL 363

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            +P+F+L+ +FY LVGNFG+AI+L T+ +KL+ FPLA K Y S + M+ +QP +++++E+
Sbjct: 364 TRPIFLLVEFFYGLVGNFGVAILLLTLTIKLIMFPLANKSYESLSKMRKLQPLMEKIKEQ 423

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
            K   PQ  QKA ++LY+   INPLAGC PIL+QIPVF+A+YKV+ +++EMRHAPF+GWI
Sbjct: 424 NKD-DPQAQQKATMELYQKEKINPLAGCLPILVQIPVFYALYKVLYVTIEMRHAPFFGWI 482

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVG----------------IWPIIMSLSMFIQMK 506
           +DL+A DPTNI+TLFG++P+       +G                +  I+   +M++Q  
Sbjct: 483 RDLSAPDPTNIWTLFGLIPWDPSSAPLIGGLIGVHTGGGFTLALSVLAILYGFTMWLQQA 542

Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           M+PP  D  Q  I  +MP++F F ++SFPAGL++YW+W+N++SI QQ  IM   GAE  +
Sbjct: 543 MNPPAPDPVQRQIFAFMPIIFTFIMASFPAGLLVYWAWNNILSIAQQYFIMHRFGAENPI 602

Query: 567 IDRLRSTFSKNYN 579
            D +     K   
Sbjct: 603 DDFI-GKLKKAPA 614


>gi|319403768|emb|CBI77352.1| translocase precursor subunit [Bartonella rochalimae ATCC BAA-1498]
          Length = 612

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 252/610 (41%), Positives = 363/610 (59%), Gaps = 30/610 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------T 42
           ME N N+F+AI LS ++  AW   Y+ P+  ++   +   Q                   
Sbjct: 1   MEYNRNFFIAIGLSFVVFVAWHFLYIVPQQAKLQESKITTQKLSNHNAALPTNDPYFSHN 60

Query: 43  VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
               + V  +   +  + R   L+ + RV +K   L GSINL G +FDDL L+ Y L V 
Sbjct: 61  ASTNDTVPVANRPITPEIRKAELAKTNRVLIKTNELEGSINLVGGKFDDLLLKKYRLKVD 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKIL-TPTTPIKLVF 160
             SP + LL+P+     YFAE  + S++   + LP SNT W L       TP+TPI LV+
Sbjct: 121 KKSPEIILLNPNGLPTTYFAEFGFTSSSLPAQALPQSNTKWQLEGDNTTLTPSTPITLVY 180

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
            N    +F RT S+DEHY+F I D+++N S   +  S   RI R  P   TN   +    
Sbjct: 181 NNGQGQIFHRTFSVDEHYMFTIKDSISNESNSPVYLSSYARIARAAPPEDTNATYLLHEG 240

Query: 221 IAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
           +  +   SL  +KY             + S+   + +  W+GI+DKYWA   IP ++T +
Sbjct: 241 MIGIAGDSLKTEKYTALAELSPNPQNGQKSVIFPNITRGWIGITDKYWAVAVIPPQDTEY 300

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            S+F Y    +  YQ+   +  +T+ P ++ T TN LFAGAK    I+HY+  L I +F 
Sbjct: 301 TSRFVYFDRLNTHYQSDLQSALLTVPPHETKTITNRLFAGAKRVEIINHYQNQLKINKFS 360

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           +LIDWGWF FI KPMF L+   Y    NFG+AI+L TV +K+L FPLA K Y S A +K 
Sbjct: 361 LLIDWGWFDFITKPMFALIDILYKYTENFGVAILLITVLLKILLFPLAHKSYKSIARLKL 420

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           IQP + E++EK+     +  Q+A+I+LYKT  INP AGCWPIL+Q P+FFA+YKV+ I++
Sbjct: 421 IQPMMLEIKEKYADDRNK-QQQAIIELYKTKKINPFAGCWPILIQFPIFFALYKVLYITI 479

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P P
Sbjct: 480 EMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYAVPTFLILGAWPLIMGITMFLQMQMNPLP 539

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
            D  Q ++  WMP++F   L+SFPAGL+IYW+W+N++SI+QQ++IMK  G +I   D L+
Sbjct: 540 QDPTQVIVFRWMPIIFTIMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKIEFFDNLK 599

Query: 572 STFSKNYNSQ 581
           +   K+   +
Sbjct: 600 AIVQKDSKKE 609


>gi|295690947|ref|YP_003594640.1| membrane protein insertase [Caulobacter segnis ATCC 21756]
 gi|295432850|gb|ADG12022.1| membrane protein insertase, YidC/Oxa1 family [Caulobacter segnis
           ATCC 21756]
          Length = 618

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 214/614 (34%), Positives = 324/614 (52%), Gaps = 40/614 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-------RKNIQTVKQPNQVDNSYA 54
             N N  + I  +  I+  +Q F + P+ ++   E       ++            N   
Sbjct: 3   NDNKNTLMFIVSAFAILIGYQFFILGPQQKKAEAEMRAKKAAQQQTAAQAGVPLDANGNP 62

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
           A L   R QA + SPR+ +  P+L GSI LKG + DDL LR Y    + NSP V L  P 
Sbjct: 63  APLRLSRDQAKAQSPRIVVDTPALSGSIALKGGRIDDLFLRKYAETTAKNSPPVELFRPE 122

Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174
             ++A+FA+  +   AN   LP+S TVW    G++L P +P+ L + N   + F R I++
Sbjct: 123 GAEHAWFADFGWAG-ANLPGLPDSRTVWTAAPGQVLRPNSPVTLTYDNGMGLTFTRVIAV 181

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGDKSLVEQ- 232
           D+  +F + D+V NN     + +P   + R            V EG I VLG     +  
Sbjct: 182 DDQAMFSVTDSVKNNGTAAFQLAPYATVQRQGITDHLGKTQIVHEGAIGVLGSGKDQKLE 241

Query: 233 --KYSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAK 288
             KY   +K       +S   W GI+DKYW +  IP +  +  +Q++  +  G   Y   
Sbjct: 242 LAKYQKWKKDKPLTTFDSVGGWAGITDKYWLAALIPGQTEAIKAQYRVTNVAGVDVYDVN 301

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------------IPRFEML 333
           F      + PG ++T T  LFAGAK  P +  Y+   A               IPRF+  
Sbjct: 302 FVGPTQALNPGATLTQTTRLFAGAKTVPLLRKYQYGGAKPPAWWEFWSNAKAEIPRFDWA 361

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +DWG F    +P+F ++  FY +VGNFG+AI+  TV +KL+ +P+A K Y S A MK I 
Sbjct: 362 VDWGMFSMFTRPIFNVLEIFYKMVGNFGLAILALTVLLKLILYPMADKSYESMAKMKKIA 421

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P++++L+ K K  P +  Q+ M+ LY+   INP+ GC P+L+QIPVF+A+YKV+++++EM
Sbjct: 422 PEVEKLKAKHKDDPAK-QQQEMMALYQKEKINPMMGCLPMLIQIPVFYALYKVLTVTIEM 480

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF----------MHVGIWPIIMSLSMFI 503
           RHAPF+GWI+DL+A DP+ IF LFG +P+               +H+G+WP++   +M++
Sbjct: 481 RHAPFFGWIQDLSARDPSTIFNLFGAIPWDPATAPLIGGFLGGPLHIGVWPLLYGFTMWL 540

Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
              M+PP  D  Q  I    P++F F LS F  GL+IYW WSNV++IVQQ V+M+ +  E
Sbjct: 541 TTAMNPPAGDPIQQKIFQLFPIIFTFTLSQFAVGLVIYWCWSNVLTIVQQYVMMRRYKVE 600

Query: 564 IGLIDRLRSTFSKN 577
             +   +     K 
Sbjct: 601 NPIDRIIARLQGKA 614


>gi|209542536|ref|YP_002274765.1| 60 kDa inner membrane insertion protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530213|gb|ACI50150.1| 60 kDa inner membrane insertion protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 589

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 193/590 (32%), Positives = 311/590 (52%), Gaps = 15/590 (2%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
                + VA  LS +++  ++ F       E+  +         P     + A V     
Sbjct: 1   MDTKRFIVATLLSAMVLVGFEYFMPKQAHHEVAQQAAQTSRQTPPTDAARAPAPVAGASS 60

Query: 62  AQALSMSP----RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
               + +P    R+ +  P + GSI+L GA+ DD+ LR YH  V+  SP V +L P + +
Sbjct: 61  QPVSTPAPQAETRLAIDAPKVAGSIDLLGARLDDMVLRDYHETVAKGSPQVRILEPGHDQ 120

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
              + E+ +++           T         LT   P+ L + N   + F+  +S+D H
Sbjct: 121 QPNYVEIGWMNLPGGQVRVPDATTVWSADAPKLTSDRPVTLSWDNGAGVTFQIVVSIDAH 180

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI----AVLGDKSLVEQK 233
           Y+F I   + N S   +   P  R+ R    T T  + V EG I      L + S    +
Sbjct: 181 YMFGIEQRIVNRSAQPVSLYPYARVDRAYTPTETGGYLVHEGPISVIDGRLDESSYKSLR 240

Query: 234 YSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYL-SDGHARYQAKFSA 291
                  ++S        W GI+DKYW +  IP + T+    + Y  + G   YQ  F A
Sbjct: 241 TGATPPGNLSWTKGGQGGWAGITDKYWLTAVIPQQGTAVTGSYGYQANGGAGVYQVGFIA 300

Query: 292 NEITI-LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
              T+  PG +  T + +FAGAKE   +  Y+  L IP F   +D+GWF F+ +P+F ++
Sbjct: 301 QAATVVAPGTTGATVSHVFAGAKEVNLLEQYQSSLHIPDFWKAVDFGWFAFLTRPIFYVL 360

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
            +   L+GNFG+A+M  T+ VK LFFPLA +Q+ S A M+ +QPK+ ELRE++ +S    
Sbjct: 361 DWLNTLLGNFGLALMAFTLLVKALFFPLATRQFRSMAKMRQLQPKVQELRERY-KSDQMA 419

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           L + M+ LYK   +NP AGC P+++QIPVF+++YK + I++EMRHAPF+GWI DL+A D 
Sbjct: 420 LNQNMMALYKAEGVNPAAGCLPMVVQIPVFWSLYKDLYITIEMRHAPFFGWIHDLSAPDL 479

Query: 471 TNIFTLFGILPFYLPG---FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527
           TN+F LFG++P+       ++ +G+WPI+   +MF+Q K++P P D  Q  +   MPV+F
Sbjct: 480 TNLFNLFGLIPWDPNVLSPYLQLGVWPILFGATMFLQQKLNPAPTDPAQQRMFQMMPVLF 539

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
            F ++  PAGL+IY+ W+N++++ QQ VI +   + +  +  + +   + 
Sbjct: 540 TFFMARQPAGLVIYYCWNNLLTVAQQMVIQRRMKSAVDKVGAIPAAAGRK 589


>gi|296115059|ref|ZP_06833701.1| 60 kDa inner membrane insertion protein [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295978396|gb|EFG85132.1| 60 kDa inner membrane insertion protein [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 719

 Score =  397 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 203/588 (34%), Positives = 306/588 (52%), Gaps = 19/588 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+      VA+A+S +++  +Q    +P  +                           D 
Sbjct: 1   MDI-KRLMVAVAMSAMVLLGFQYLVPHPDHKAATQPALGAGQDTPAAAPGADAGNGATDA 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           +       PR+ +    + GSINL+GA+ DDL L+ YH  V   SP+V +L P     + 
Sbjct: 60  KDD-----PRLAINTGRVGGSINLRGARLDDLVLKDYHETVKPGSPLVRILDPRQDPQSN 114

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             E+ +++ A         T         LT   P+ L + N    +FE  +++D++Y+F
Sbjct: 115 LVEVGWLNIAGGQVRVPDATTVWSADQASLTQDQPVTLRWDNGQGQVFELVVAIDQNYMF 174

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI----AVLGDKSLVEQKYSD 236
            +   V N +   +   P  R+ R      T  + V EG I      L + S    +   
Sbjct: 175 SVTQKVHNQAAGPVSLYPYSRVDRAYTPVETGGYLVHEGPISVIDGRLDESSYKSVRNGT 234

Query: 237 IEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG--HARYQAKFSA-N 292
           I   + S     +  W GI+DKYW +  IP +++     + Y+ +      YQ  F+A  
Sbjct: 235 IPPGNTSWNKPGTGGWSGITDKYWLTAVIPQQDSLVTGSYGYVPEAGHEGVYQVGFTART 294

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
              I PG    T   +FAGAKE P +  YE  L IP F   +D+GWF F+  P+F ++ +
Sbjct: 295 PEVIAPGGDGVTETHVFAGAKEVPLLEKYEASLHIPSFWKAVDFGWFAFLTHPIFTVLDW 354

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
              L+GNFG+A+M  T+ VK LFFPLA KQ+ S   M+ +QPKI  LRE++K      L 
Sbjct: 355 LNTLLGNFGLALMAFTLVVKGLFFPLATKQFRSMGKMRQLQPKIKALRERYKD-DQMALN 413

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           + MI LYK   +NP +GC P+LLQIPVF+ +YKV+ +++EMRHAPF+GWI DL+AADPTN
Sbjct: 414 QHMIALYKEEKVNPASGCLPMLLQIPVFWCLYKVLFVTIEMRHAPFFGWIHDLSAADPTN 473

Query: 473 IFTLFGILPFYL---PGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528
           IFTLFG++P+       F  +G+WPI   L+MF Q K++P P AD  Q  +   MP++F 
Sbjct: 474 IFTLFGLIPWDPTHISTFFQLGLWPIAFGLTMFAQQKINPAPAADPAQQKMFQLMPILFT 533

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
           F ++  P+GL+IY+ W+N++++ QQAVI +   AE      +R    K
Sbjct: 534 FFMARQPSGLVIYYCWNNLLTMAQQAVIQRRVNAEAKAPVVIRPEKEK 581


>gi|148261132|ref|YP_001235259.1| 60 kDa inner membrane insertion protein [Acidiphilium cryptum JF-5]
 gi|326404533|ref|YP_004284615.1| inner membrane protein OxaA [Acidiphilium multivorum AIU301]
 gi|166975846|sp|A5G0F8|OXAA_ACICJ RecName: Full=Inner membrane protein oxaA
 gi|146402813|gb|ABQ31340.1| protein translocase subunit yidC [Acidiphilium cryptum JF-5]
 gi|325051395|dbj|BAJ81733.1| inner membrane protein OxaA [Acidiphilium multivorum AIU301]
          Length = 601

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 200/601 (33%), Positives = 303/601 (50%), Gaps = 30/601 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVY-----------PRIEEMNNERKNIQTVKQPNQVD 50
             N     +I++S++I+  +Q    Y           P  +    +  + Q         
Sbjct: 1   MDNRRLLYSISISLVILVLFQVIASYVLPPPKKAPPHPATQTAQTQPVSGQPAPGVPAPS 60

Query: 51  NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
               A      A  +   PR+ +  P L GS++L GA+ DDL L  YH  V   SP+V L
Sbjct: 61  AVPPAAAPGGVAAKIPAGPRLAISTPLLRGSMSLVGARLDDLVLTRYHQTVKKTSPLVQL 120

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170
           LS + T  +Y+ +  + +   +             SG  L+P  P+ L + N   + FE 
Sbjct: 121 LSQAGTAKSYYVQFGWDAAPGSSLKVPGPDTVWTSSGGDLSPAHPVTLSWNNGAGVTFEL 180

Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230
            +++D  YLF +   V N+    +   P  RI R        +F + +G I V       
Sbjct: 181 KLAVDRQYLFTVQQRVINHGAAAVEVYPWSRIRRDFLPEEPGSFTLHKGPIGVFHGTLHE 240

Query: 231 ----------EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
                     +   +     +         W GI+ KYW +  IPS+       ++YL+D
Sbjct: 241 MGYEGVKSGGKHPAAGDAPGTAYQTTNLGGWAGITGKYWLTALIPSQGREVIGAYRYLAD 300

Query: 281 GHARYQAKF-----SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
                   +     +A  +   PG + +TT  +FAGAK    + HYE    IP FE  ID
Sbjct: 301 PGQPEHGGYQVDYMTAKPVDAAPGATASTTTHVFAGAKVLSILSHYETQYRIPLFERAID 360

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           +GWF+F+ KP+F+ + Y   + GN G+AI++ T+ +KL+ FPL +  Y S A M+ I PK
Sbjct: 361 FGWFFFLTKPIFIALDYLAGVFGNMGVAIIVFTIGLKLVLFPLVRTSYRSMARMRAITPK 420

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           +  LRE++K    Q  QK ++ LYK   +NP AGC P+L QIP+FF++YKVI IS+ MRH
Sbjct: 421 VQALRERYKDDQMQ-QQKEIMALYKAEGVNPAAGCLPMLPQIPIFFSLYKVIFISIGMRH 479

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPG---FMHVGIWPIIMSLSMFIQMKMSPPPA 512
           APF  WI DL+A DPTNIF LFG+LPF+      F+H+GI PIIM ++M+ Q +++PPP 
Sbjct: 480 APFVLWIHDLSAEDPTNIFNLFGLLPFHPSALSPFLHLGILPIIMGITMWGQQRLNPPPP 539

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           D  QA ++ +MPV+F F L  F AGL++Y+  +N ++I+QQ  IM+   A       L +
Sbjct: 540 DPTQAKMMQFMPVIFTFMLGRFAAGLVLYYCVNNTLTILQQWTIMRGTNAAPRAAANLNA 599

Query: 573 T 573
            
Sbjct: 600 K 600


>gi|296283114|ref|ZP_06861112.1| putative inner membrane protein translocase component YidC
           [Citromicrobium bathyomarinum JL354]
          Length = 585

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 201/589 (34%), Positives = 319/589 (54%), Gaps = 15/589 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQ----NFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M+   N  +A+ L  I++  ++     +Y  P   E  +     +     +   N   A 
Sbjct: 1   MDNQRNLILAVVLCGILILGYEAAVTYYYPTPPETEQVDRATTAEQRVTQDTAQNPAIAA 60

Query: 57  LIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
              D A    +ALS   RV +  P + GSINL GA+ DD+ L+ +   V  +S  V L +
Sbjct: 61  AAIDEAVDLDEALSAGNRVAIDAPRVEGSINLVGAKIDDIELKDHRATVDKDSGPVQLFA 120

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
           P+ T    FA+  +V      ++P ++TVW   SG+ LTP TPI L + NA    F   +
Sbjct: 121 PAGTPIQNFAQFGFV--GEGTQVPGADTVWQ-ASGEALTPDTPIDLRWDNAQGQRFRIRL 177

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
           S+D++Y+     TV N     +  SP   I R     + +T+    G I   G       
Sbjct: 178 SIDDNYMITAEQTVANTGDAPVVVSPFATITRTSLTASKSTWISHSGPIGTFGGTVDYGP 237

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
            Y D+ +  + +     +WLG +D YW    IP   ++  + F+ L  G   ++A    N
Sbjct: 238 DYDDVVEQKVVSGAADPAWLGFTDIYWLGALIPEAGSAPDTGFRSL--GDNLFRADLIYN 295

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
             T+ PG+ IT T+ LFAGAKE   +  Y +D  I +F + IDWGWF +  KP+  L+  
Sbjct: 296 PATLQPGRQITRTSRLFAGAKESGVLDAY-QDAGIAQFGLAIDWGWFRWFEKPILWLLLQ 354

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
            +++VGNFG+AI+L T  V+ L FP+A+K + S A+MK IQP++ +L+EK K       Q
Sbjct: 355 IFSVVGNFGVAIILLTCIVRGLMFPIAQKGFSSMASMKAIQPEMKKLQEKHKDDKVT-QQ 413

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           + M +L+K   +NP+AGC P+LLQIPVFFA+YKV+ +++EMRH PF  WI+DL+A DP +
Sbjct: 414 QEMQKLFKERGVNPVAGCLPMLLQIPVFFALYKVLILAIEMRHQPFIFWIRDLSAPDPAH 473

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532
           I  LFG+LPF +PG + +G   +++  +M++  +++P   D  Q  + + MP V +F +S
Sbjct: 474 ILNLFGMLPFEVPGMLALGPLALLLGFTMWLTFRLNPAAMDPVQQQVFSIMPWVMMFVMS 533

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            F AGL++YW+ SN++++ QQ  +   H       ++ R+  +    S+
Sbjct: 534 PFAAGLLLYWNTSNILTLAQQKYLYSKHPQLREAAEKERAEKAAKAQSE 582


>gi|167644608|ref|YP_001682271.1| putative inner membrane protein translocase component YidC
           [Caulobacter sp. K31]
 gi|254772764|sp|B0T872|OXAA_CAUSK RecName: Full=Inner membrane protein oxaA
 gi|167347038|gb|ABZ69773.1| 60 kDa inner membrane insertion protein [Caulobacter sp. K31]
          Length = 630

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 204/627 (32%), Positives = 317/627 (50%), Gaps = 49/627 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-----RKNIQTVKQPNQV--DNSYA 54
           + N N  + +  +  I+  +Q   + P+ ++   E         Q   QP      +   
Sbjct: 4   DSNKNTLMFLVCAFAILIGYQFLVMGPQQKQREAELRAKKAAEAQVAVQPGMTIGADGTP 63

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
             L   R +A + SPR+ +  P+L GSI LKGA+ DDL L+ Y      NSP V L  P 
Sbjct: 64  QPLKLSRDEAKAQSPRIAVDTPALSGSIALKGARIDDLWLKRYTQTADKNSPPVELFRPE 123

Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174
             ++A+FA+  +   A    LP   TVW    G++L PTTP+ L + N   ++F RTIS+
Sbjct: 124 GAEHAWFADFGWAGIAGMTGLPTPQTVWTAAPGQVLRPTTPVVLTYDNGQGLVFTRTISV 183

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL----- 229
           D   +F + DTV N     +  +P   + R    T       +   +   G   L     
Sbjct: 184 DADAMFTVADTVRNQGGAAVALAPYASVQRQGIPTEGPHGLGKTQIVYEGGIGVLGGIDG 243

Query: 230 ---------VEQKYSDIEKSS--ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
                     + KY   +K      N      W+G++DKYW +  +P +      +F+  
Sbjct: 244 VEGGKYILQNKAKYPKWKKDKPLQDNLQSKGGWIGMTDKYWLAALVPQQSEMIKGRFQVK 303

Query: 279 S-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA----------- 326
              G   Y++ F+    ++  G ++T T  LFAGAK  P +  Y+               
Sbjct: 304 PVSGVDVYESAFTGAPKSLAAGATVTNTTRLFAGAKTVPLLTRYQYGGKPVVWWEFWNRP 363

Query: 327 ---IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
              IP F+  +DWG F  I +P+F ++  FY +VGNFG+AIML TV +KL+ FPLA K Y
Sbjct: 364 ANVIPNFDKAVDWGMFEVITRPIFNVLEIFYKMVGNFGVAIMLLTVALKLILFPLADKSY 423

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            S A MK I P++++L+ K K  P +  Q+ M+ LY    INP+ GC P+L+QIP+F+++
Sbjct: 424 ESMAKMKKIAPEVEKLKVKNKDDPAK-QQQEMMALYAKEKINPMMGCVPMLIQIPIFYSL 482

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF----------MHVGIW 493
           YKV+++++EMRHAPF+GWI DL+A DP+    LFG++ +               +H+G+W
Sbjct: 483 YKVLTVTIEMRHAPFFGWITDLSARDPSTFMNLFGLIHWDPATAPLIGAFLSGPLHIGVW 542

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
           P++   +M++   M+PP  D  Q  I  + P+VF F LS F  GL+IYW WSNV++I+QQ
Sbjct: 543 PLLYGFTMWLTTAMNPPAGDPIQQKIFQFFPIVFTFTLSQFAVGLVIYWCWSNVLTILQQ 602

Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            +IM  +  +  +   +     K   +
Sbjct: 603 YIIMHRYKVDNPIDQLVNRLRGKTVEA 629


>gi|326386366|ref|ZP_08207989.1| putative inner membrane protein translocase component YidC
           [Novosphingobium nitrogenifigens DSM 19370]
 gi|326209027|gb|EGD59821.1| putative inner membrane protein translocase component YidC
           [Novosphingobium nitrogenifigens DSM 19370]
          Length = 606

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 192/607 (31%), Positives = 305/607 (50%), Gaps = 34/607 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQ----NFYV----------------YPRIEEMNNERKNI 40
           ME+  N   A+ L  II+  W      FY                        + +    
Sbjct: 1   MEKQRNLIWAVVLMGIILIGWDLGLRYFYPHAGEHPHAAASSTATSASGTAPASGDAAPA 60

Query: 41  QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
           +  ++      +  A+   D   AL+   RV +  P + GSINL G   DDL L  +   
Sbjct: 61  KPTREGGLQSPADIAIEAQDLKTALAAPTRVAIAAPGVSGSINLVGGLIDDLTLNRHRET 120

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
             + SP V L SP+ T   ++A+L +    N ++ P  NTVW       LTPTTP+ L +
Sbjct: 121 SDAGSPPVRLFSPAGTPAQHYAQLGWTG-DNGVQTPQGNTVWQ-ADRTRLTPTTPVTLRW 178

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
            NA    F    ++DE+Y+     +VTN     +   P   I R     + +T+ V  G 
Sbjct: 179 TNATGQTFAIRYAIDENYMISAQQSVTNAGTAPVSVKPFALINRTDRTASLDTWQVHSGP 238

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
           I            Y D+  +         +W+G +D YW S  +P   T     F+ L +
Sbjct: 239 IGAFDGSVDFASHYKDVNAAGEVAPAGQTNWIGFTDIYWLSALVPDAGTKPSGSFRALGN 298

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
           G   ++A       T+ PG++++ +  LFAGAKE   +  Y +   I  F + IDWGWF 
Sbjct: 299 GF--FRADLIYPAATVAPGQTVSQSLRLFAGAKENRVLEAY-EAQGISNFSLAIDWGWFR 355

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           +  KP+F L+   ++ V NFGIAI+L T+ V+ + FP+A++Q+ S A M+ IQPK+  ++
Sbjct: 356 WFEKPIFWLLDSLFHAVKNFGIAIILLTLIVRGIMFPVAQRQFASMAAMRAIQPKMKAIQ 415

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           E++K   P   Q+ ++ LYK   +NPLAGC P+ LQIPVFFA+YKV+ +++EMRH PF  
Sbjct: 416 ERYKDDKP-RQQQEIMALYKEEGVNPLAGCLPMFLQIPVFFALYKVLVLTIEMRHQPFAL 474

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           WI DL++ DPT++  LFG+LPF   G   +G+  +++  +M++Q K+ P   D  Q  ++
Sbjct: 475 WIHDLSSPDPTHLLNLFGLLPFTPTGMFGIGVLALLLGATMWLQFKLQPAAMDPSQQQVM 534

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG--------AEIGLIDRLRS 572
             MP + +F +S+F +GL+IYW  SN+++I QQ  +   H          ++ +  +++ 
Sbjct: 535 AIMPWMMMFVMSTFASGLLIYWITSNLLTIAQQRYLYSRHPQLKAQATKDQVDIDRQVKR 594

Query: 573 TFSKNYN 579
                 N
Sbjct: 595 ERKPAPN 601


>gi|85709448|ref|ZP_01040513.1| putative inner membrane protein translocase component YidC
           [Erythrobacter sp. NAP1]
 gi|85688158|gb|EAQ28162.1| putative inner membrane protein translocase component YidC
           [Erythrobacter sp. NAP1]
          Length = 595

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 190/577 (32%), Positives = 296/577 (51%), Gaps = 25/577 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQ----NFYVYPRIEEMNNERKNIQTVKQPNQV------- 49
           M+   N  +A+ LS +++ +W      FY    +   +       +              
Sbjct: 1   MDNQRNILLAVVLSGLLILSWDMGMRYFYPQSDVPAPSEVMSGAASDPADADTVTSSTDG 60

Query: 50  -----DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                  + A V   D   AL+   RV +  P + GSINL GA+ DDL L+ Y       
Sbjct: 61  PAGDLGEAAAEVGPVDLGTALASENRVIIDAPRVAGSINLVGARVDDLVLKDYDETTQEG 120

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
           S  V +L+P  T   ++AE  +V     +             G+ LTP TP+ L   + N
Sbjct: 121 SDPVRILAPDRTDEQHYAEFGFVVGGQRMSSRAIWE----ADGERLTPETPVTLSRTDEN 176

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
            I +    S+D++Y+     TV N S +     P   I R     + + F    G   V 
Sbjct: 177 GITYRVAFSIDDNYMVSAQQTVENGSENAAIVQPFALIKRTSETASPDQFIAHAGPTGVF 236

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
           G        Y ++ +    N   + SWLG +D YWAS  IP +  +  + ++ L  G   
Sbjct: 237 GGSLYDPNSYEELAELGRDNPAGAVSWLGFTDNYWASALIPGEGEADSAGWRSL--GDQL 294

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           ++A    +  T+  G S+T    LFAGAKE   +  Y +D  I  F   I WGWF +  K
Sbjct: 295 FRADLIYDAQTVPAGGSLTRGTQLFAGAKESAILDQY-EDAGITYFGKAISWGWFEWFEK 353

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+  L+     LVGNFG+AI+L TV ++ L FP+A+KQ+ S A MK +QPK+  ++E++K
Sbjct: 354 PLLWLLRTLNGLVGNFGVAIILLTVIIRGLLFPIAQKQFASMAQMKAVQPKMKAIQERYK 413

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               Q  Q+ +++LYK   +NPLAGC P+L+QIP+FFA+YKV+ +++EMRH P + ++ D
Sbjct: 414 DDK-QTQQQKIMELYKEEKVNPLAGCLPLLIQIPIFFALYKVLYLAIEMRHEP-FLYMSD 471

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+A DP  I  LFG+LP+ +PGF+ +GI  +++ ++M++  K++P   D  Q  I N MP
Sbjct: 472 LSAPDPAKILNLFGLLPYDVPGFLGIGILAVLLGVTMWLTFKLNPSAMDPVQQQIFNLMP 531

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
              +F ++ F AGL+IYW  SNV+++ QQ+ +   H 
Sbjct: 532 WFLMFVMAPFAAGLLIYWVTSNVLTLAQQSYLYSRHP 568


>gi|87198602|ref|YP_495859.1| putative inner membrane protein translocase component YidC
           [Novosphingobium aromaticivorans DSM 12444]
 gi|87134283|gb|ABD25025.1| protein translocase subunit yidC [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 600

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 193/575 (33%), Positives = 305/575 (53%), Gaps = 21/575 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQ----NFYVYPRIEEMNNERKNIQTVKQPNQV------- 49
           M+   N  +A+ L+ I++  W      FY  P  +       + +               
Sbjct: 1   MQNQRNLIMAVVLTGILLLGWDVAMRWFYPQPAQKPKVEAAASAEPANGEKPKRTREGGL 60

Query: 50  -DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
            +    A+   D AQ L+   R+ +  P L GSINLKGA  DD+ L  +   V  NS  V
Sbjct: 61  QNAGDIALEKKDLAQELAAGHRIAIDAPGLKGSINLKGALVDDVTLARHREGVDRNSAPV 120

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
            L SP+ T   +FA++ +V     +  P++NT+W    G  LTP TP+ L + NA+   +
Sbjct: 121 RLFSPAGTPAQHFAQIGWV--GEGVAAPDANTMWQ-ADGAKLTPQTPVTLRWTNASGQTY 177

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
               ++D  Y+      V N     +   P   + R     + +T+ V  G I       
Sbjct: 178 SIRYAIDGDYMITATQGVANTGPAPVVVRPFALVNRTDKTASLDTWNVHSGPIGAFDGSV 237

Query: 229 LVEQKYSDIEKSS--ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
             +  YS + ++      F  + +W+G +D YW S  IP       + F+ L  G   Y+
Sbjct: 238 NFDNNYSTVAEAEGGAIPFKGTANWIGFTDIYWLSALIPDANAKAEAAFRSL--GQGVYR 295

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
           A      ++I PGK+++ T  LFAG KE   +  Y +   +  F + IDWGWF +  KP+
Sbjct: 296 ADLIYPSVSIAPGKALSQTVRLFAGGKENAVLEKY-EAAGVTNFSLSIDWGWFRWFEKPI 354

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+   +  VGNFG+AI+L T+ V+ + FP+A++Q+ S A M+ +QPK+  ++E++K  
Sbjct: 355 FWLLDSIFKKVGNFGVAIILLTLIVRGVMFPIAQRQFASMAAMRALQPKMKAIQERYKDD 414

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q  Q+ +++LYK   +NPLAGC PI LQIPVFFA+YKV+ +++EMRH PF  WIKDL+
Sbjct: 415 K-QKQQQEIMELYKREKVNPLAGCLPIFLQIPVFFALYKVLVLTIEMRHQPFALWIKDLS 473

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
           A DP ++  LFG+LPF  P F+ +G+  I++ ++M++Q K+ P   D  Q  +  +MP +
Sbjct: 474 APDPLHVLNLFGLLPFDPPSFLGIGVLAILLGITMWLQFKLQPAAMDPAQQQVFAFMPWI 533

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            +F ++ F AGL+IYW  SN+++I QQ  +   H 
Sbjct: 534 MMFVMAPFAAGLLIYWITSNLLTIAQQKYLYSRHP 568


>gi|319405206|emb|CBI78811.1| translocase precursor subunit [Bartonella sp. AR 15-3]
          Length = 612

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 253/610 (41%), Positives = 361/610 (59%), Gaps = 30/610 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------T 42
           ME N N+F+AI LS ++  AW   YV P+  ++   +   Q                   
Sbjct: 1   MEYNRNFFIAIGLSFVVFVAWHFLYVIPQQAKLQESKIIAQKLSNHNAALPTNDMHFSNN 60

Query: 43  VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
               + V  +   +  + R   L+ + R+ +K   L GSINL G +FDDL L+ Y L V 
Sbjct: 61  ALTDDTVPVTNRPITPEMRKAELAKTDRILIKTNELEGSINLVGGKFDDLLLKKYRLKVD 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKIL-TPTTPIKLVF 160
             SP + LL+PS    AYFAE  + S++   + LP SNT W L     + TP+TPI LV+
Sbjct: 121 KKSPEIILLNPSGLPTAYFAEFGFTSSSLPAKALPQSNTKWQLEGYNTILTPSTPITLVY 180

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
            N    +F RT S+D+HY+F I D+++N S   I  S   R+ R  P   TN   +    
Sbjct: 181 NNGQGQIFHRTFSVDDHYMFTIKDSISNESSSPIYISSYARVARTAPPEDTNATYLLHEG 240

Query: 221 IAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
           +  +   SL  +KY             + SI   + +  W+GI+DKYWA   IP ++  +
Sbjct: 241 MIGIAGNSLKTEKYTALAELSPNPQNGQKSIIFPNITGGWIGITDKYWAVAVIPPQDKEY 300

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            S+F Y    +  YQ+   +  +T+ P ++ T  N  FAGAK    I+HY+  L I +F 
Sbjct: 301 TSRFVYFDRLNTHYQSDLQSALLTVSPHETKTIINRFFAGAKRVEIINHYQNQLKINKFS 360

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           +LIDWGWF FI KPMF L+   Y    NFGIAI+L TV +K+L FPLA K Y S A +K 
Sbjct: 361 LLIDWGWFDFITKPMFTLIDILYKYTENFGIAILLITVLLKILLFPLAHKSYKSMARIKL 420

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           IQP + E++EK+     +  Q+A+I+LYKT  INP AGCWPIL+Q P+FFA+YKV+ I++
Sbjct: 421 IQPMMLEIKEKYANDRNK-QQQAIIELYKTKKINPFAGCWPILVQFPIFFALYKVLYITI 479

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P P
Sbjct: 480 EMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYAVPTFLILGAWPLIMGITMFLQMQMNPLP 539

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
            D  Q ++  WMPV+F   L+SFPAGL+IYW+W+N++SI+QQ++IMK  G +I   D L+
Sbjct: 540 QDPTQVIVFRWMPVIFTVMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKIEFFDNLK 599

Query: 572 STFSKNYNSQ 581
           +   K    +
Sbjct: 600 AIVQKKSKKE 609


>gi|149186358|ref|ZP_01864671.1| putative inner membrane protein translocase component YidC
           [Erythrobacter sp. SD-21]
 gi|148829947|gb|EDL48385.1| putative inner membrane protein translocase component YidC
           [Erythrobacter sp. SD-21]
          Length = 579

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 185/566 (32%), Positives = 299/566 (52%), Gaps = 14/566 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVDN-SYAA 55
           ME + N+ + + LS+ ++  WQ     FY  P    +  E  +               +A
Sbjct: 1   MENSRNFVLVLTLSLAVLIGWQWAMDHFYPQPDNVPVTAETVDTPAEAAAAASGEIGESA 60

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
               D   +L  + R+ + +P + GSI + GA  DD+ L+ Y      +S  V + +P  
Sbjct: 61  ATSVDLESSLGAAERIRIDSPKVAGSIAVGGAMIDDIVLKDYAASPDGDSEPVRIFAPRG 120

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
           T    +A+  ++     I             G  L+   P+ L     N +L E+T S+D
Sbjct: 121 TDVQQYAQFGFLVNGAKISDDVLWE----SDGDTLSVGNPVTLRHDAGNGVLLEQTYSID 176

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
           E+Y+  +   V+N   + I   P G + R     + + F    G I   G        YS
Sbjct: 177 ENYMITVEQAVSNRGENGIVAQPFGLVGRTSTTMSDDFFIAHSGPIGSFGQAVEYGYDYS 236

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D+E+    +   +  WLG +D YW +  +P   T   + F+ L  G   Y+A    + + 
Sbjct: 237 DVEEERKVSPSGTTDWLGFTDIYWLAALVPQAGTDPDATFRSL--GGDLYRADMIYDPVR 294

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           +  G+ +TTT+ LFAGAK+   +  Y +D  IP+F + IDWGWF +  KP   L+   + 
Sbjct: 295 VEAGRKVTTTSRLFAGAKDSEILDAY-QDAGIPQFGLAIDWGWFRWFEKPFLWLLKNIFA 353

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           LVGNFG+AI++ T+ V+ L FP+A+KQ+ S A MK IQPK+ +L+E+ K    +  Q+ M
Sbjct: 354 LVGNFGVAIIILTIIVRGLMFPIAQKQFASMAAMKAIQPKMKKLQERHKDDKVK-QQQEM 412

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
            +L+K   +NPLAGC P++LQIP+FFA+YKV+ +++EMRH   + WI+DL+A DP  I  
Sbjct: 413 QKLFKEEQVNPLAGCLPLILQIPIFFALYKVLYLAIEMRHQ-NFLWIEDLSAPDPATILN 471

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
           LFG+LPF  P F+ +GI  +++ ++M++  K++P   D  Q  + + MP V +F ++ F 
Sbjct: 472 LFGLLPFTPPSFLAIGILAVLLGVTMWLTFKLNPSAMDPVQQQVFSIMPWVLMFIMAPFA 531

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHG 561
           AGL++YW  SNV+++ QQ  +   H 
Sbjct: 532 AGLLLYWVTSNVLTLAQQKYLYSKHP 557


>gi|296535613|ref|ZP_06897793.1| inner membrane protein OxaA [Roseomonas cervicalis ATCC 49957]
 gi|296264068|gb|EFH10513.1| inner membrane protein OxaA [Roseomonas cervicalis ATCC 49957]
          Length = 524

 Score =  390 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 198/499 (39%), Positives = 300/499 (60%), Gaps = 12/499 (2%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128
            R+ +++P + GS+ L+GA+ DDL L+ Y    +++SP+V + +P      YFA+  + S
Sbjct: 8   QRLRVESPRVSGSLLLRGARLDDLVLKDYRETTAASSPLVRMFAPREELQPYFAQWGWSS 67

Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN 188
                 +P++ T W   SG  L P +P+ L ++N     F+  +SLD +Y+F+    V N
Sbjct: 68  ADGRTRVPDNETDWT-ASGGPLGPDSPVTLSWENGQGQTFQIVLSLDRNYMFQAEQRVIN 126

Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS----- 243
           ++ D +   P  R+ R +       + + EGF+ VL    L E  Y   +          
Sbjct: 127 SAADPVLVLPWSRVRRERTPHVAGFYILHEGFVGVLN-GRLNELTYKSAKDDGARTRGVA 185

Query: 244 -NFHESNSWLGISDKYWASVFIP-SKETSFHSQFKYL-SDGHARYQAKFSAN-EITILPG 299
                S  W G +DKYW +   P        + ++++  +G  R+Q  F+     T+  G
Sbjct: 186 LEQETSGGWAGFTDKYWLAAIAPVDAAQPLRAAWRHVAENGEDRWQVDFATPQPQTVASG 245

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359
            + +    LFAGAKE   +  Y  +L I  F+  ID+GWFYF+ KP F  + Y + L GN
Sbjct: 246 ATGSIATRLFAGAKEVHLLDAYRDNLGITDFDKAIDFGWFYFLTKPFFYALDYLFKLFGN 305

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           FGIAI++ TV +KL FFPLA K Y S A MK + PK+ E+RE++K  P +     M+ LY
Sbjct: 306 FGIAILVFTVALKLAFFPLANKAYKSMARMKVLTPKMQEIRERYKDDPAKAQS-EMMALY 364

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           ++  +NP +GC PIL+QIPVFFA+YKV+ +++EMRHAPF+GWI+DL+A DPTN+F LFG+
Sbjct: 365 RSEKVNPASGCLPILIQIPVFFALYKVLFVTIEMRHAPFFGWIRDLSAPDPTNLFNLFGL 424

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539
           +P+  P  +H+ +W IIM ++MF+Q K++P PAD  QA I  WMP++F F L+SFPAGL+
Sbjct: 425 IPWDPPALLHMPVWAIIMGVTMFVQQKLNPAPADPIQAKIFTWMPIIFTFMLASFPAGLV 484

Query: 540 IYWSWSNVISIVQQAVIMK 558
           IYWSW+N++S+ QQ  IM+
Sbjct: 485 IYWSWNNLLSVAQQWYIMR 503


>gi|319898441|ref|YP_004158534.1| translocase precursor subunit [Bartonella clarridgeiae 73]
 gi|319402405|emb|CBI75946.1| translocase precursor subunit [Bartonella clarridgeiae 73]
          Length = 612

 Score =  389 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 248/610 (40%), Positives = 361/610 (59%), Gaps = 30/610 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA----- 55
           ME N N+F+AI LS ++  AW   Y+ P+  ++   +     +   N    +        
Sbjct: 1   MEYNRNFFIAIGLSFVVFVAWHFLYIVPQQAKLQESKIIAHKLSNHNSTFPANDMHFSNH 60

Query: 56  -------------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
                        V  + R   L+ + RV +K   L GSINL G +FDDL L+ Y L V 
Sbjct: 61  GLKDEIVSITNHHVTPEIRKAELAKTNRVLIKTNELEGSINLVGGKFDDLLLKKYRLTVD 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKIL-TPTTPIKLVF 160
             SP + LL+P+     YFAE  ++S++   + LP SNT W +     + TP+TPI L++
Sbjct: 121 KTSPEIILLNPNGLTTTYFAEFSFISSSLPAKALPQSNTKWQIEGNNTILTPSTPITLIY 180

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
            N    +F R  S+D HY+F I D+++N S   I  S   RI R  P   TN        
Sbjct: 181 NNGQGQIFRRIFSVDNHYMFTIKDSISNESSSPIHLSSYARIARAAPPEDTNATYFLHEG 240

Query: 221 IAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
           +  +   SL  +KY             + S+   + +  W+GI+DKYWA   IP ++  +
Sbjct: 241 MIGIAGDSLKTEKYTALAELNPNPKNGQKSVIFSNVTGGWVGITDKYWAVAVIPPQDKEY 300

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            S+F Y    +  YQ+   +  +T+ P ++ T TN LFAGAK    I+HY+  L I +F 
Sbjct: 301 TSRFVYFDQLNTHYQSDLQSALLTVSPHETKTITNRLFAGAKRVEIINHYQNQLKINKFS 360

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           +LIDWGWF FI KPMF  +   Y   GNFG+ I+L TV +K+L FPLA K Y S A++K 
Sbjct: 361 LLIDWGWFDFITKPMFAFIDILYKYTGNFGVTILLITVLLKILLFPLAHKSYKSMAHIKL 420

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           IQP + E++EK+     +  Q+A+I+LYKT  INPLAGCWP+L+Q P+FFA+YKV+ I++
Sbjct: 421 IQPMMLEIKEKYAHDRNK-QQQAIIELYKTKKINPLAGCWPVLIQFPIFFALYKVLYITI 479

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           EMRHAPF+GWIKDLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P P
Sbjct: 480 EMRHAPFFGWIKDLAAPDPTSIFNLFGLLPYTVPVFLTLGAWPLIMGITMFLQMQMNPLP 539

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
            D  Q ++  W+PV+F   L+SFPAGL+IYW+W+N++SI+QQ++IMK  G +I   D L+
Sbjct: 540 QDPTQVIVFRWIPVIFTVMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKIEFFDNLK 599

Query: 572 STFSKNYNSQ 581
           +   K+   +
Sbjct: 600 AIVQKDTKKE 609


>gi|254421078|ref|ZP_05034802.1| 60Kd inner membrane protein [Brevundimonas sp. BAL3]
 gi|196187255|gb|EDX82231.1| 60Kd inner membrane protein [Brevundimonas sp. BAL3]
          Length = 599

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 214/599 (35%), Positives = 332/599 (55%), Gaps = 23/599 (3%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----EMNNERKNIQTVKQPNQVDNSYAAV 56
           E + N  + I  S +I+  +    + P+ E     +     ++           +     
Sbjct: 4   ENSRNTIIFIVCSALILGVYWFAVLRPQAERRAVQQQAQAEQSQTAENAARTALSPQGPT 63

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
            + DR+QALS + RV +++ +L GS++L+G + DDL L  Y        P V L  P   
Sbjct: 64  FVTDRSQALSTAARVPIQSGTLKGSLSLQGGRIDDLFLTDYKETQDKPEP-VELFRPQGM 122

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
           +NAYFA+  +        +P  NTVW L +G  LTPTTP+ L + N   + F R +S+D+
Sbjct: 123 QNAYFAQFGWTGPNVVGGVPGPNTVWRLTAGSTLTPTTPVTLTWDNGQGLRFTRLVSVDD 182

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLG---DKSLVEQ 232
            Y+F I+DTV N     I  +P G + R   P  A ++  V EG I   G   D    ++
Sbjct: 183 RYVFSILDTVQNLGTQSITIAPYGSVQRQGVPPLAGSSHIVHEGAIGTFGKPGDYRTEQK 242

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSA 291
           KY D  K        +  WLGI+DKYW +  +P +  +  ++F+    +G  + +A    
Sbjct: 243 KYKDWLKEPRIENASTGGWLGITDKYWLAALLPQQNEAVETEFRVRDVNGGQQLEANILG 302

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
              TI PG + T T  LFAG K    +  YE+ L +PRF   IDWG F+F+ +P+F ++ 
Sbjct: 303 AARTIQPGGTATETQRLFAGVKRAEVLKTYEETLHLPRFVYAIDWGMFWFLTRPIFWILE 362

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
             Y LVG+FG+AI+  TV VKL+ FPLA   Y S + M+N+QPK++E+++KFK   PQ  
Sbjct: 363 NVYGLVGSFGVAILALTVIVKLVMFPLANNAYASMSKMRNLQPKMEEIKKKFKD-DPQKQ 421

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
           Q+  + LY+   INP+AGC P++LQIPVF+A+YKV+++++EMRH PF G+I DL+A DP+
Sbjct: 422 QQETMALYQKEKINPVAGCLPLVLQIPVFYALYKVLTVTIEMRHQPFLGFIHDLSARDPS 481

Query: 472 NIFTLFGILPFYLPGFMHVGIW----------PIIMSLSMFIQMKMSPPPADKGQAMILN 521
            ++ LFG++P+       +G             +   L+M++Q  M+PP AD  Q  I  
Sbjct: 482 VVWNLFGLIPWNPATLPLLGGLLVGPLGIGLLAVAYGLTMWLQTAMNPPAADPVQRQIFQ 541

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           +MP+VF F ++ F AGL++YW+WSN+++I+QQ  IM  + AE  + D + +   K   +
Sbjct: 542 FMPLVFTFIMAPFAAGLLVYWAWSNILTILQQYYIMHRYKAENPIDDFI-ARIRKTKAA 599


>gi|332186329|ref|ZP_08388074.1| Inner membrane protein translocase component YidC, long form
           [Sphingomonas sp. S17]
 gi|332013697|gb|EGI55757.1| Inner membrane protein translocase component YidC, long form
           [Sphingomonas sp. S17]
          Length = 565

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 189/564 (33%), Positives = 295/564 (52%), Gaps = 13/564 (2%)

Query: 2   ERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           E   N+ V   ++ +I++ W      F+          + K +  V        +     
Sbjct: 3   EDRKNFVVFAVIAALILFGWPLIQSKFFPSNPPATKIVDGKQVP-VANSTANPTATTPSA 61

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
           I DR   L+ +PRV +  P L GSINLKGA+ DDL L  Y   V+ +SP + LLSP+  +
Sbjct: 62  IRDRRVVLAETPRVAIDTPRLKGSINLKGARIDDLVLLDYKETVAKDSPPIRLLSPAGAE 121

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
            AYFA   + +   N    ++       S  +L P  P+ L   NA    F+ T+S+D+ 
Sbjct: 122 GAYFAGFGWRTDGLNPPAADTV---WTASAPVLRPGQPVTLTAANATGQRFQITLSVDKD 178

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y+F +  TV N     +  +  G + R       +            G            
Sbjct: 179 YMFTVQQTVANGGNAPVPVAAYGYVNRGISADPDSWTIHVGPMSVNDGTAHY--GPNWKD 236

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
              + + F  +  WLG +DKYW +  IP +  +F  QF+  +     YQA ++    T+ 
Sbjct: 237 LDKAPTRFTTTGGWLGFTDKYWLATLIPDQSKAFDGQFR--AGAGQTYQADYTLQPQTLA 294

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
           PG+ +T T   FAGAKE   +  Y       + +  +DWG+   + KP+F  + + + LV
Sbjct: 295 PGRQVTQTTRFFAGAKEVALLDRYTDKEGATKLDYALDWGYLRVLEKPIFYYLDWLFRLV 354

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
           GNFG+AI+L TV ++ L FP+A++Q+ S A M+ +QPK+  L+E++K      +Q+ ++ 
Sbjct: 355 GNFGVAIILLTVTIRALMFPIAQRQFASMAAMRAVQPKMKALQERYKDDKV-RMQQEVMA 413

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPLAGC P L+QIP+F+A+YKV+ +++EMRH PF  WIKDL+A DP     LF
Sbjct: 414 LYKQEKVNPLAGCLPTLIQIPIFYALYKVLMLTIEMRHQPFVAWIKDLSAPDPLTPVNLF 473

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537
           G+LPF  P F+ +G+ PI++ +SM+ Q KM+P P D  Q  +   +P V +F ++ F  G
Sbjct: 474 GLLPFTPPHFIAIGVVPILLGISMYFQFKMNPQPMDDAQKQVFAILPWVLMFVMAPFAVG 533

Query: 538 LIIYWSWSNVISIVQQAVIMKMHG 561
           L +YW  +N ISI+QQ ++   H 
Sbjct: 534 LQVYWITTNCISILQQRLLYARHP 557


>gi|254293247|ref|YP_003059270.1| hypothetical protein Hbal_0879 [Hirschia baltica ATCC 49814]
 gi|254041778|gb|ACT58573.1| 60 kDa inner membrane insertion protein [Hirschia baltica ATCC
           49814]
          Length = 600

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 201/597 (33%), Positives = 323/597 (54%), Gaps = 24/597 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYAA 55
           +   ++ + I L + ++   Q F   P+ +     R        I      +   ++ A+
Sbjct: 6   QDQKSFMIGIGLVLCVMALSQFFIWGPQQKAQEQARLEAQAQAAIAAPSVSSGSVDTTAS 65

Query: 56  VLIDDRAQAL---SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
               DRA+ L   S   R++    S+ GSI+LKGA+ DDL+++ +   +      V LLS
Sbjct: 66  AAPVDRAEILTDTSNGGRIDFDASSVDGSISLKGARLDDLSMKRHFETIEKTEE-VHLLS 124

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
           P  +K AY+A L +   A+   LP  +T+W   +G  LTP+TPI L ++    + F R I
Sbjct: 125 PQGSKGAYYAALGWRGDAD--RLPGVSTLWKQTAGSTLTPSTPITLGYETTQ-LSFSRKI 181

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
            +D++Y+F   DTVTNNS + +   P G + +         F +       +    L  Q
Sbjct: 182 EVDDNYMFTYTDTVTNNSSETLSIRPFGFMRQFGMPDDWKPFYILHEGAVGMAGNKLKLQ 241

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG-HARYQAKFSA 291
           KY +++K     +     W+G++ KYW + FIP++  +   Q K + DG    Y A    
Sbjct: 242 KYKNLDKGKALAYTSQGGWIGLTQKYWMTAFIPAQTENVAVQSKVVMDGLRPTYVASIEG 301

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEK----DLAIPRFEMLIDWGWFYFIAKPMF 347
            +  I PG++ + +  +FAGAK    +  Y++      AIPRF   +DWG F+F  KP F
Sbjct: 302 TDRAIEPGQTASYSQRIFAGAKRVEVLDAYQQGATGQEAIPRFTDAVDWGNFWFFTKPFF 361

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+S+F +  GNFG+AI+  TV VKL FFP+  K Y S A M+ + P+++E+++K+    
Sbjct: 362 WLLSHFNSWFGNFGLAILALTVIVKLAFFPIQNKAYASMAKMRKLMPQMEEIKKKWADDK 421

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
               QK  ++LYK    NP +GC P++ Q+ VF+ +YK + ++LEMRH PF+GWIKDL+A
Sbjct: 422 E-RQQKETMELYKREKANPFSGCLPLIPQMFVFYGLYKTLFVTLEMRHEPFFGWIKDLSA 480

Query: 468 ADPTNIFTLFGILPFYLPGF-----MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DPT+   LFG LPF          + +G+ PI+   +M++   ++ PP D  Q M++ +
Sbjct: 481 PDPTSFLNLFGALPFDPSSLPLIGALSIGVLPILYGFTMWLLQNLNAPPPDPTQRMMMQF 540

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           +P+VF F  + F AGL+IYW+WSN++SI QQ  IM+ +G E      +++ F K+  
Sbjct: 541 LPIVFTFIFAGFAAGLVIYWTWSNILSIAQQYYIMRKNGVETQFDKFIKAKFGKSEE 597


>gi|148284763|ref|YP_001248853.1| putative inner membrane protein translocase component YidC
           [Orientia tsutsugamushi str. Boryong]
 gi|146740202|emb|CAM80485.1| 60 kD inner-membrane protein, preprotein translocase subunit
           [Orientia tsutsugamushi str. Boryong]
          Length = 567

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 203/570 (35%), Positives = 329/570 (57%), Gaps = 11/570 (1%)

Query: 1   ME-RNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN---SYAA 55
           M+  N  N  +AI LS+ I+  W  FY  PR+ +M+N +K      + +  +      +A
Sbjct: 1   MDSDNRLNLILAITLSLAIILGWHFFYEKPRLIKMSNAQKEKIEYNKRSSTNQYLLHESA 60

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
           + I D+   +  S RV++    L GSI+LKG +FDDL L GY  DV  NSP V LLSPS 
Sbjct: 61  LKIKDKVDIIDYSTRVKIMTNKLHGSISLKGLRFDDLILVGYKQDVLENSPDVELLSPSE 120

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
           T  AYFAE+ +    N      ++         IL         + N +N+ F  ++S+D
Sbjct: 121 TATAYFAEVGWYCAKNADSDFPNSDTLWQTDKSILQANDTTTFTWTNKHNVQFIVSVSID 180

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
           ++Y+F I  ++ NNS  Q+     G I R+  +   +    Q    ++     L E  Y+
Sbjct: 181 DNYMFTINQSIVNNSKQQLAVQFHGLIHRNLAENENSANIFQGPIASIDSY--LNEVTYN 238

Query: 236 DIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN-E 293
            +++    +++ +   WLGISDKYW + FIP  +  + + F Y   G  +YQ  F +  E
Sbjct: 239 KLKEKKHIDYNLNVVHWLGISDKYWLTSFIPDVKYRYSTSFMYGKAGFEKYQVSFLSPKE 298

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
           +    G S++  + LF GAKE   + +Y +   I  F+  ID+GWFY + KP+F  +S+F
Sbjct: 299 VVNSDGGSLSVVHHLFLGAKEVKLLDYYAEKYNIKLFDRAIDFGWFYILTKPLFYTLSFF 358

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           Y   GNFG++I++ T+ +K++ F  + + Y S   M+++QP+I  L+E +     + L +
Sbjct: 359 YKYCGNFGVSILIVTILIKIMMFSFSNRSYSSMKKMRDLQPRIQRLQELYGDDKIK-LHQ 417

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            ++ LYK   ++        L+Q+P+FF++YKV+ +++EMRHAPF  WIKDL+A DPT I
Sbjct: 418 EIMALYKKEKVSLAGSFLQSLIQLPIFFSLYKVLHVTIEMRHAPFLSWIKDLSALDPTCI 477

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALS 532
           F LFG+LPF++PGF+++G  P++ S +M +Q K++P P  D  QA +L +MP++ +   +
Sbjct: 478 FNLFGLLPFHVPGFLNIGALPVLTSATMILQQKINPAPTADPAQAQVLKFMPLILLIVFN 537

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           +FPAGL+IYW+W+N++SIVQQ +I K++  
Sbjct: 538 NFPAGLLIYWTWNNILSIVQQFIINKINNK 567


>gi|329848429|ref|ZP_08263457.1| membrane protein insertase, YidC/Oxa1 family, N-terminal
           domain-containing protein [Asticcacaulis biprosthecum
           C19]
 gi|328843492|gb|EGF93061.1| membrane protein insertase, YidC/Oxa1 family, N-terminal
           domain-containing protein [Asticcacaulis biprosthecum
           C19]
          Length = 624

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 200/620 (32%), Positives = 320/620 (51%), Gaps = 42/620 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD------NSYAA 55
           +   N    +  S+++++ +Q F   P+ ++   +R         +             A
Sbjct: 6   QDTRNMIYFLIASMVLLFGYQYFVTGPQQKKAQEQRAVAAAQASASSSSAVAAGLPVTGA 65

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
             +  R QA++ +PRV++  PSL GS++LKGA  DDL L+ Y     + SP V LL P+ 
Sbjct: 66  AAVMTREQAIAAAPRVKIDTPSLRGSLSLKGALVDDLYLKSYKETTKAGSPDVELLRPAG 125

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
           +  AY+ +  Y+   N   LP++NT+WNL SG +L+P  P+ L   N   ++F RT+S+D
Sbjct: 126 SDRAYYVQSGYIGQ-NIPGLPDANTMWNLQSGNVLSPGKPVVLTHDNGAGLMFTRTLSID 184

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG----------VQEGFIAVLG 225
           ++Y+  + + V N     + FSP   ++R       +  G            +     + 
Sbjct: 185 DNYMITVAEAVANTGAGPVAFSPYSTVIRFDMPAGLDRTGVVHEGAIATFPNKIEAGKID 244

Query: 226 DKSLVEQKYSDIEKSSISNFHESN----SWLGISDKYWASVFIPSKETSFHSQFKYL-SD 280
                  KY D+ K       +       W G++DKYW +  IP+++       +    +
Sbjct: 245 RYKTQSLKYKDMAKEPEKKVFKDVASVGGWFGLTDKYWMAAVIPAQDQPVRFTTQANVQN 304

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
               Y+A +    +T+ PG++  + + +FAGAK    +  YE DL IPRF    DWG   
Sbjct: 305 NKPIYRAGYLDETVTVAPGQTWQSQSHIFAGAKLNSQLQAYENDLKIPRFGYATDWGSLQ 364

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           F+  PM+ L+   Y  +GNFG AI+  TV VK++F+PLA K Y S   MK +Q ++    
Sbjct: 365 FLTYPMYWLLDKLYGFLGNFGFAILALTVIVKIVFYPLAHKAYESMTKMKQVQDRLKPKL 424

Query: 401 EKFKQS---PPQVLQKAMIQLYKTHNINPLAG---CWPILLQIPVFFAIYKVISISLEMR 454
           +  K      PQ  Q+A ++LY+   +NP+AG   C P+LLQIPVF+A+YKV+ +++EMR
Sbjct: 425 DAIKSRFPDDPQKQQEATMKLYQDEKVNPMAGLGGCLPMLLQIPVFWALYKVLILAIEMR 484

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF----------MHVGIWPIIMSLSMFIQ 504
           HAPF+GWIKDL+A DPT+   LFG+LPF               +H+G+  I+  LSM++ 
Sbjct: 485 HAPFFGWIKDLSAPDPTSFVNLFGLLPFEPATVPLIGGILAGPLHLGVVAILYGLSMWLS 544

Query: 505 MKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            +M+P    D  Q  +L +MPV+  F ++    GLIIYW WSN+++I QQ  IM     E
Sbjct: 545 QQMTPTANVDPMQKKMLAFMPVILTFFMAQVAVGLIIYWIWSNILTIFQQWTIMHRLKVE 604

Query: 564 IGLI---DRLRSTFSKNYNS 580
             +     ++R+   +   +
Sbjct: 605 NPIDTGIGKVRALLDRKKAA 624


>gi|56552522|ref|YP_163361.1| putative inner membrane protein translocase component YidC
           [Zymomonas mobilis subsp. mobilis ZM4]
 gi|59803051|sp|Q9RNL5|OXAA_ZYMMO RecName: Full=Inner membrane protein oxaA
 gi|56544096|gb|AAV90250.1| YidC translocase/secretase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 579

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 174/585 (29%), Positives = 297/585 (50%), Gaps = 11/585 (1%)

Query: 1   MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      N  +   LS +I++ W  F     +       +  +   +            
Sbjct: 1   MDDKHQQRNLVIVTILSALILFGWS-FVTKHWLSTPPAPTQQGKNQPKAELTAEESGDKP 59

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
           +    Q L  +PR+ +   S+ GS+NLKG + DDL L  +   ++ NSP V L SP+ T+
Sbjct: 60  LKPVDQVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTE 119

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
           NA+F    +  T  N+ LPN++++W   S K+     P+   + N    +F  T+S+D  
Sbjct: 120 NAWFTSFGW--TGENVALPNADSLWKADSDKLTADH-PVNFYWNNQQGQIFRITLSVDHD 176

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y+F   ++V N     +   P             +++ +  G I V          ++DI
Sbjct: 177 YMFNATESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADI 236

Query: 238 EKSSISNFHESN--SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           +K++ ++   +    W+G SDKYW +   P           + S  +  YQA F+   + 
Sbjct: 237 DKATNNSIRNNTQGGWIGFSDKYWLTALAP-HNQKIAIDTDFRSSSNHHYQADFTVAPVV 295

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           +  GK+ +T+  +FAGAKE   +  Y   L +P F+  IDWGWF  I K  F  + + + 
Sbjct: 296 VAAGKTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFL 355

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G+AI+L    ++ L FP+A KQY S A+M+ +QPK+  +RE++K      +++ +
Sbjct: 356 HVGNYGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEA-RMRQEL 414

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           + LY+   +NP AGC P+ +Q P+F A+YK + +++E RH PF  WIKDL+A DP   F 
Sbjct: 415 VTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFN 474

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
           LFG+L F  P F+ +G+ PII+ ++M++Q + SP   +  Q  I++++P++ V  ++   
Sbjct: 475 LFGLLHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLA 534

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           AGL +Y+ ++N+IS+ Q   +   H       DR          +
Sbjct: 535 AGLQVYYIFNNLISLAQMMWLQHRHSTPEERQDRAERKRPSKKKA 579


>gi|162147919|ref|YP_001602380.1| inner membrane protein oxaA [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161786496|emb|CAP56078.1| putative inner membrane protein oxaA [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 572

 Score =  372 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 188/560 (33%), Positives = 300/560 (53%), Gaps = 15/560 (2%)

Query: 32  EMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSP----RVELKNPSLIGSINLKGA 87
           E+  +         P     + A V         + +P    R+ +  P + GSI+L GA
Sbjct: 14  EVAQQAAQTSRQTPPTDAARAPAPVAGASSQPVSTPAPQAETRLAIDAPKVAGSIDLLGA 73

Query: 88  QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147
           + DD+ LR YH  V+  SP V +L P + +   + E+ +++           T       
Sbjct: 74  RLDDMVLRDYHETVAKGSPQVRILEPGHDQQPNYVEIGWMNLPGGQVRVPDATTVWSADA 133

Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207
             LT   P+ L + N   + F+  +S+D HY+F I   + N S   +   P  R+ R   
Sbjct: 134 PKLTSDRPVTLSWDNGAGVTFQIVVSIDAHYMFGIEQRIVNRSAQPVSLYPYARVDRAYT 193

Query: 208 QTATNTFGVQEGFI----AVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASV 262
            T T  + V EG I      L + S    +       ++S        W GI+DKYW + 
Sbjct: 194 PTETGGYLVHEGPISVIDGRLDESSYKSLRTGATPPGNLSWTKGGQGGWAGITDKYWLTA 253

Query: 263 FIPSKETSFHSQFKYL-SDGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHH 320
            IP + T+    + Y  + G   YQ  F A   T + PG +  T + +FAGAKE   +  
Sbjct: 254 VIPQQGTAVTGSYGYQANGGAGVYQVGFIAQAATVVAPGTTGATVSHVFAGAKEVNLLEQ 313

Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
           Y+  L IP F   +D+GWF F+ +P+F ++ +   L+GNFG+A+M  T+ VK LFFPLA 
Sbjct: 314 YQSSLHIPDFWKAVDFGWFAFLTRPIFYVLDWLNTLLGNFGLALMAFTLLVKALFFPLAT 373

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
           +Q+ S A M+ +QPK+ ELRE++ +S    L + M+ LYK   +NP AGC P+++QIPVF
Sbjct: 374 RQFRSMAKMRQLQPKVQELRERY-KSDQMALNQNMMALYKAEGVNPAAGCLPMVVQIPVF 432

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG---FMHVGIWPIIM 497
           +++YK + I++EMRHAPF+GWI DL+A D TN+F LFG++P+       ++ +G+WPI+ 
Sbjct: 433 WSLYKDLYITIEMRHAPFFGWIHDLSAPDLTNLFNLFGLIPWDPNVLSPYLQLGVWPILF 492

Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             +MF+Q K++P P D  Q  +   MPV+F F ++  PAGL+IY+ W+N++++ QQ VI 
Sbjct: 493 GATMFLQQKLNPAPTDPAQQRMFQMMPVLFTFFMARQPAGLVIYYCWNNLLTVAQQMVIQ 552

Query: 558 KMHGAEIGLIDRLRSTFSKN 577
           +   + +  +  + +   + 
Sbjct: 553 RRMKSAVDKVGAIPAAAGRK 572


>gi|88607700|ref|YP_505133.1| putative inner membrane protein translocase component YidC
           [Anaplasma phagocytophilum HZ]
 gi|88598763|gb|ABD44233.1| inner membrane protein, 60 kDa [Anaplasma phagocytophilum HZ]
          Length = 568

 Score =  372 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 188/579 (32%), Positives = 310/579 (53%), Gaps = 22/579 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N  +A+  SV I+  W+  Y      +   E       +  + +      V    
Sbjct: 1   MSEVRNLILAVVASVAIMLGWKYIYGEFFAVKTVPEG----VQESESLIPEVDDIVDYAS 56

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            + AL   PRVELKN  L  S++L+GA  DD +L  Y + +  NS  V L+SP  T +  
Sbjct: 57  YSDALKQVPRVELKNSKLAASVSLRGALIDDASLVKYRVSLDKNSENVLLMSPEGTVSDS 116

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             E  +V   + +++P  +TVW L  G   +      + + N   ++F    S+D+ Y+ 
Sbjct: 117 MVEFGWVDPKHVLKVPGRDTVWALEDG---SDEQNFTIRWDNGEGLIFRLKFSVDQDYML 173

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
            +   V NN+   +  +  GRI R   +++ + +   EG I   G   L E  Y ++E++
Sbjct: 174 TVAQEVINNTDVNVHLAHYGRINRAHSKSSKSFWISHEGAIGSFGHG-LKEWTYKNLEEA 232

Query: 241 S------ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS---DGHARYQAKFSA 291
                  ++      SW+G +DKYW +  IPS        F+      +G +R+Q  +S 
Sbjct: 233 GSIRLSGVTREDGGRSWIGFADKYWFTALIPSASEQGKLAFRTQRVYREGASRFQVDYSK 292

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
           +  TI     +     LF GAKE   +  Y+  L IP F+  +D+G  YFI KP+F+L+ 
Sbjct: 293 SHGTIGAHDKVEAVTHLFMGAKELELLDQYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQ 352

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           YF+ L+GNFG+AI++ TV +KL+ FPL+ + YVS   +K +QP++  ++E +K      +
Sbjct: 353 YFHKLLGNFGLAIVMLTVAIKLVAFPLSMRSYVSMFKLKRLQPEVLRIKELYKTDDL-RI 411

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
            K +  L+K H ++PL+G  P+L+QIP+FFA+YKV+ +++EMRHAP +GWI+DL++ D  
Sbjct: 412 SKEIASLFKKHKVSPLSGFLPVLIQIPIFFALYKVLFVTIEMRHAPLFGWIRDLSSQDTA 471

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPADKGQAMILNWMPVVFVFA 530
           N   LFG++P   P    +G+ P+++ L+M +Q K M    A   +  ++ ++P +FVF 
Sbjct: 472 NFLNLFGLIPLEPPF--CIGVLPVVLGLTMVLQQKVMQKDQATPDRYGVMKFLPYIFVFV 529

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            SSFP+GL++YW  SNVI+I+QQ ++++       L   
Sbjct: 530 FSSFPSGLVLYWICSNVITILQQ-IVIRYFVCRKELGAN 567


>gi|241762238|ref|ZP_04760320.1| 60 kDa inner membrane insertion protein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373285|gb|EER62904.1| 60 kDa inner membrane insertion protein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 579

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 174/585 (29%), Positives = 297/585 (50%), Gaps = 11/585 (1%)

Query: 1   MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      N  +   LS +I++ W  F     +       +  +   +            
Sbjct: 1   MDDKHQQRNLVIVTILSALILFGWS-FVTKHWLSTPPAPTQQGKNQLKAELTAEESGDKP 59

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
           +    Q L  +PR+ +   S+ GS+NLKG + DDL L  +   ++ NSP V L SP+ T+
Sbjct: 60  LKPVDQVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTE 119

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
           NA+F    +  T  N+ LPN++++W   S K+     P+   + N    +F  T+S+D  
Sbjct: 120 NAWFTSFGW--TGENVALPNADSLWKADSDKLTADH-PVNFYWNNQQGQIFRITLSVDHD 176

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y+F   ++V N     +   P             +++ +  G I V          ++DI
Sbjct: 177 YMFNATESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADI 236

Query: 238 EKSSISNFHESN--SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           +K++ ++   +    W+G SDKYW +   P           + S  +  YQA F+   + 
Sbjct: 237 DKATNNSIRNNTQGGWIGFSDKYWLTALAP-HNQKIAIDTDFRSSSNHHYQADFTVAPVV 295

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           +  GK+ +T+  +FAGAKE   +  Y   L +P F+  IDWGWF  I K  F  + + + 
Sbjct: 296 VAAGKTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFL 355

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G+AI+L    ++ L FP+A KQY S A+M+ +QPK+  +RE++K      +++ +
Sbjct: 356 HVGNYGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEA-RMRQEL 414

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           + LY+   +NP AGC P+ +Q P+F A+YK + +++E RH PF  WIKDL+A DP   F 
Sbjct: 415 VTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFN 474

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
           LFG+L F  P F+ +G+ PII+ ++M++Q + SP   +  Q  I++++P++ V  ++   
Sbjct: 475 LFGLLHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLA 534

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           AGL +Y+ ++N+IS+ Q   +   H       DR          +
Sbjct: 535 AGLQVYYIFNNLISLAQMMWLQHRHSTPEERQDRAERKRLSKKKA 579


>gi|5932359|gb|AAD56912.1|AF180145_4 60KD inner-membrane protein yidC [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 579

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 172/585 (29%), Positives = 295/585 (50%), Gaps = 11/585 (1%)

Query: 1   MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      N  +   LS +I++ W  F     +       +  +   +            
Sbjct: 1   MDDKHQQRNLVIVTILSALILFGWS-FVTKHWLSTPPAPTQQGKNQPKAELTAEESGDKP 59

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
           +    Q L  +PR+ +   S+ GS+NLKG + DDL L  +   ++ NSP V L SP+ T+
Sbjct: 60  LKPVDQVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTE 119

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
           NA+F    +  T  N+ LPN++++W   S K+     P+   + N    +   T+ +D  
Sbjct: 120 NAWFTSFGW--TGENVALPNADSLWKADSDKLTADH-PVNFYWNNQQGQILRITLCVDHD 176

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y+F   ++V N     +   P             +++ +  G I V          ++DI
Sbjct: 177 YMFNATESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADI 236

Query: 238 EKSSISNFHESN--SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           +K++ ++   +    W+G SDKYW +   P           + S  +  YQA F+   + 
Sbjct: 237 DKATNNSIRNNTQGGWIGFSDKYWLTALAP-HNQKIAIDTDFRSSSNHHYQADFTVAPVV 295

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           +  GK+ +T+  +FAGAKE   +  Y   L +P F+  IDWGWF  I K  F  + + + 
Sbjct: 296 VAAGKTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFL 355

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G+AI+L    ++ L FP+A KQY S A+M+ +QPK+  +RE++K      +++ +
Sbjct: 356 HVGNYGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEA-RMRQEL 414

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           + LY+   +NP AGC P+ +Q P+F A+YK + +++E RH PF  WIKDL+A DP   F 
Sbjct: 415 VTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFN 474

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
           LFG+L F  P F+ +G+ PII+ ++M++Q + SP   +  Q  I++++P++ V  ++   
Sbjct: 475 LFGLLHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLA 534

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           AGL +Y+ ++N+IS+ Q   +   H       DR          +
Sbjct: 535 AGLQVYYIFNNLISLAQMMWLQHRHSTPEERQDRAERKRPSKKKA 579


>gi|260753817|ref|YP_003226710.1| inner membrane protein translocase component YidC [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
 gi|258553180|gb|ACV76126.1| 60 kDa inner membrane insertion protein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 579

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 175/585 (29%), Positives = 297/585 (50%), Gaps = 11/585 (1%)

Query: 1   MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      N  +   LS +I++ W  F     +       +  +   +            
Sbjct: 1   MDDKHQQRNLVIVTILSALILFGWS-FVTKHWLSTPPAPTQQGKNQPKAELTAEESGDKP 59

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
           +    Q L  +PR+ +   S+ GS+NLKG + DDL L  +   ++ NSP V L SP+ T+
Sbjct: 60  LKPVDQVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTE 119

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
           NA+F    +  T  N+ LPN++++W   S K+     P+   + N    +F  T+S+D  
Sbjct: 120 NAWFTSFGW--TGENVALPNADSLWKADSDKLTAEH-PVNFYWNNQQGQIFRITLSVDHD 176

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y+F   ++V N     +   P             +++ +  G I V          ++DI
Sbjct: 177 YMFNATESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADI 236

Query: 238 EKSSISNFHESN--SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           +K++ ++   S    W+G SDKYW +   P           + S  +  YQA F+   + 
Sbjct: 237 DKATNNSIRNSTQGGWIGFSDKYWLTALAP-HNQKIAIDTDFRSSSNHHYQADFTVAPVM 295

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           +  GK+ +T+  +FAGAKE   +  Y   L +P F+  IDWGWF  I K  F  + + + 
Sbjct: 296 VAAGKTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFL 355

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G+AI+L    ++ L FP+A KQY S A+M+ +QPK+  +RE++K      +++ +
Sbjct: 356 HVGNYGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEA-RMRQEL 414

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           + LY+   +NP AGC P+ +Q P+F A+YK + +++E RH PF  WIKDL+A DP   F 
Sbjct: 415 VTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFN 474

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
           LFG+L F  P F+ +G+ PII+ ++M++Q + SP   +  Q  I++++P++ V  ++   
Sbjct: 475 LFGLLHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLA 534

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           AGL +Y+ ++N+IS+ Q   +   H       DR          +
Sbjct: 535 AGLQVYYIFNNLISLAQMMWLQHRHSTPEERQDRAERKRLSKKKA 579


>gi|330993393|ref|ZP_08317328.1| Inner membrane protein oxaA [Gluconacetobacter sp. SXCC-1]
 gi|329759423|gb|EGG75932.1| Inner membrane protein oxaA [Gluconacetobacter sp. SXCC-1]
          Length = 578

 Score =  370 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 187/568 (32%), Positives = 304/568 (53%), Gaps = 23/568 (4%)

Query: 9   VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS 68
           VA ALS +++  ++ F             K ++      +   +   V     + +    
Sbjct: 2   VATALSAVVLVGFEYFLP-------QQNHKTVEQQAPAPEAPPASTPVTAAAPSASDQPD 54

Query: 69  PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128
           PRV +    + GS++L+GA+ DDL L+ YH  V + SP+V +L P   +     E+ + +
Sbjct: 55  PRVAIDADRVHGSLDLRGARLDDLVLKNYHETVQNGSPLVRVLEPRGQEQPNLVEVGWAN 114

Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN 188
            +                   LT   P+ L + N    +F  T+++D++Y+F +   VTN
Sbjct: 115 VSGGHVAVPDANTLWTADHDSLTQARPVTLSWDNGQGQVFSITVAIDQNYMFSVTQKVTN 174

Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE- 247
           +  + +   P  R+ R      T  + V EG I+V+    L E  Y  + K ++   +  
Sbjct: 175 HGGEPVSLYPFSRVERGYTPVETGGYLVHEGPISVIDH-RLDESSYKSLRKGAVPPGNIA 233

Query: 248 -----SNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHARYQAKFSANEIT-ILP 298
                   W GI+DKYW +  IP +++     + Y    +     Y   F+A     +  
Sbjct: 234 WTKAGQGGWAGITDKYWLAAVIPQQDSDVAGTYAYQGAGNGDKGTYDVGFTARAPLVVAA 293

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
           G   +T + +FAGAKE P +  YE  L IP F   +D+GWF F+ +P+F ++ +   ++G
Sbjct: 294 GGEASTASHVFAGAKEVPLLEKYESSLHIPDFWKAVDFGWFAFLTRPIFTVLDWLNTMLG 353

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           NFG+A+M  T+ VK LFFPLA KQ+ S   M+ +QPKI  LRE++K      L + MI L
Sbjct: 354 NFGLALMAFTLLVKALFFPLATKQFHSMGKMRQLQPKIKALRERYKD-DQMALNQQMIGL 412

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NP +GC P+LLQIPVF+ +YK + +++EMRHAPF+GWI DL+A DPTN+FTLFG
Sbjct: 413 YKQEGVNPASGCLPMLLQIPVFWCLYKDLYVTIEMRHAPFFGWIHDLSAFDPTNLFTLFG 472

Query: 479 ILPFYLPGF---MHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSF 534
           ++P+        + +G+WPI   L+MF QM+++P P  D  Q  +  +MP++F F ++  
Sbjct: 473 LIPWNPSVISPMLQLGLWPIAFGLTMFAQMRLNPTPTADPAQQKMFQFMPIIFTFFMARQ 532

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           P+GL+IY+ W+N++++ QQ +I +    
Sbjct: 533 PSGLVIYYCWNNLLTMAQQTLIQRRMNK 560


>gi|226947217|ref|YP_002802290.1| putative inner membrane protein translocase component YidC
           [Azotobacter vinelandii DJ]
 gi|259515637|sp|C1DNF7|OXAA_AZOVD RecName: Full=Inner membrane protein oxaA
 gi|226722144|gb|ACO81315.1| inner membrane protein, translocase subunit YidC [Azotobacter
           vinelandii DJ]
          Length = 557

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 141/578 (24%), Positives = 246/578 (42%), Gaps = 50/578 (8%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTV---------KQPNQ 48
           M+      + +AL   S ++V  W   Y    +   N   ++                  
Sbjct: 1   MDI-KRSILLVALAVVSYLLVLQWNQDYGQAALPPQNAVAQSASPALPETVPGDSSTSAD 59

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
           V  + +   + D A + + S  ++++   L  +I+ +G     L L  +           
Sbjct: 60  VPTAGSGNQVPDSAASTAGSDLIQVRTDVLEVAIDPRGGDIVQLKLPKFPRRQDHPEIPF 119

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNAN 164
            L   + ++  Y A+     T       +   ++              +  + L F +  
Sbjct: 120 QLF-DNGSERLYLAQSGLTGTNGPDARADGRPLYVSEQRSYQLADGQDSLVVDLKFSDGG 178

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220
               +R       Y  ++   + N+S      +   ++ R                  G 
Sbjct: 179 VDYVKRFTFKRGAYDLEVRHQIANHSEQPWSGNLFAQLKRDASADPSSTTATGTATYLGA 238

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
                ++   +    D++  ++        W+     Y+ + ++P+K+ +     +   D
Sbjct: 239 ALWTSEEPYRKVSMGDMDDKNLRET-VQGGWVAWLQHYFVTAWVPNKDDTNLVATR--KD 295

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
               Y   F+ + + I  G +  T   L+AG K+   +         P  E+ +D+G+ +
Sbjct: 296 SQGNYIIGFTGSTLNIPAGATGETVTRLYAGPKDQNQLEALS-----PGLELTVDYGFLW 350

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           FIA+P+F L+   + L+GN+G +I++ TV +KL FFPL+   Y S   M+ + PK+  L+
Sbjct: 351 FIAQPIFWLLELIHALLGNWGWSIIVLTVIIKLAFFPLSAASYRSMGRMRAVAPKLQALK 410

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           E+      Q L +AM++LYK   INPL GC PIL+Q+PVF A+Y V+  S+EMR AP+ G
Sbjct: 411 EQH-GEDRQKLSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWLG 469

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           WI DL+  DP                     I PIIM  +MF Q  ++P P D  QA ++
Sbjct: 470 WITDLSVKDPYF-------------------ILPIIMGATMFFQQTLNPTPPDPMQARVM 510

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
             MP++F F    FPAGL++YW  +NV+SI QQ  I +
Sbjct: 511 KLMPIIFTFFFLWFPAGLVLYWVVNNVLSIGQQWYITR 548


>gi|92115431|ref|YP_575359.1| putative inner membrane protein translocase component YidC
           [Chromohalobacter salexigens DSM 3043]
 gi|91798521|gb|ABE60660.1| protein translocase subunit yidC [Chromohalobacter salexigens DSM
           3043]
          Length = 575

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 146/582 (25%), Positives = 247/582 (42%), Gaps = 50/582 (8%)

Query: 2   ERNWNYFVAI---ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
                  + I    L+ ++V  W   Y    +E          T    +  +   A    
Sbjct: 13  MDVKRLLLVIPLAVLAYLLVIQWNADYGQNNVEHSAPTSVAQGTTDSDDASEGLSAPSAS 72

Query: 59  DDRAQALSMSP-------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
           +    A   S               ++++   L   I+ +G       L  +   + S+ 
Sbjct: 73  NAGNNASPDSAGMPGEKSQTDANGLIQVRTDVLDLRIDPRGGDVVYAALPKHKASLDSDQ 132

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
           P V L    N   +Y A+       +   +  +        G+    +  + L  +    
Sbjct: 133 PFVLL--SDNNVRSYVAKSGLQLEGHEGRITYTPEQTEYTLGE-DQDSLTVDLKAEVNGV 189

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFI 221
            + +R +     Y   +   + N S   +     G++ R          +       G  
Sbjct: 190 NVIKRFVFDRNAYAVHVEYRLDNESQTPVSARFIGQLARDDSDDPSQGVSMGMKSFLGAT 249

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281
               + +  +  + DI     +N      W+ +   Y+ S ++P +       +    D 
Sbjct: 250 FSTQESNYEKISFEDIRDGEFNNVESEGGWVAMIQHYFTSAWVPEQNQEN--LYYANIDS 307

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
             R  A F+     I PG++      L+ G K    +         P  E+ +D+GW +F
Sbjct: 308 RDRNVAAFAGPSQQIAPGETTRMAATLYMGPKIQDRLEAIA-----PHLELTVDFGWLWF 362

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           IA P+F L++  ++L+GN+G +I+L TV VK++ FPL+ K Y S A M+ + P++  ++E
Sbjct: 363 IANPLFWLLAKIHSLIGNWGWSIVLLTVIVKIVLFPLSAKAYKSMAKMRKMGPEMKRIKE 422

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           ++     Q + + M++ Y+   INPL GC PI++Q+PVF A+Y ++  S+E+RHAPF  W
Sbjct: 423 QYGD-DRQKMSQEMMKFYQKEKINPLGGCLPIVVQMPVFIALYWMLLESVELRHAPFILW 481

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
           I DL+A DP                     I PIIM  SMF+Q  ++P P D  QA I+ 
Sbjct: 482 INDLSAQDPYF-------------------ILPIIMGASMFVQQLLNPTPPDPMQAKIMK 522

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            +PVVF F    FPAGL+IYW  +NVISI+QQ +I +   A+
Sbjct: 523 MLPVVFTFFFLWFPAGLVIYWICNNVISILQQWIITRKIEAD 564


>gi|301064543|ref|ZP_07204939.1| putative membrane protein [delta proteobacterium NaphS2]
 gi|300441291|gb|EFK05660.1| putative membrane protein [delta proteobacterium NaphS2]
          Length = 551

 Score =  367 bits (941), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 143/566 (25%), Positives = 253/566 (44%), Gaps = 24/566 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYA 54
           M+      +A ALS +I+  W  F+     +E   E      +   +             
Sbjct: 1   MD--KKTILAFALSFVILVGWSLFFAPQPKKEPPKESSPESVQPEHEKSSVTISPAAPSK 58

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
            +   ++        R+++  P      +  G       L+ Y   V+  SP V +++  
Sbjct: 59  TIAAVEQPTVQQEEKRIKIDTPLYSAVFSNVGPTIKSFKLKKYRQTVNPESPFVEMVTLE 118

Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174
                Y   L   S   + +    +     ++ +  +    I     N N I   +T   
Sbjct: 119 EGMGDYLTILFDDSIDASTQNIAFSADKESLTLQQGSEPATIVFRGTNRNGIAITQTYRF 178

Query: 175 DEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
                   +  T  N +   +    R  +    P+     +      + +      +E +
Sbjct: 179 HPDRYGIDLAVTAVNPNTVTVNGVFRTTLRALPPKDKGGYYAYVGFALFLDDKLDELEVE 238

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
                     +   +  W+   D Y+ S  +P          K+LS G       +    
Sbjct: 239 D----PGETKSATGTIGWICYEDNYFISAVVPEVPAKGSFTGKHLSSGVFEGV--YLPAA 292

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
           +++ P    T+   L+ G ++   +  + K+      +  I++GW   IAKP+  ++ +F
Sbjct: 293 VSLPPSAQATSEYELYLGPRDLSILKKFGKN-----LDKAINFGWTDIIAKPLLYVLKFF 347

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
              + N+G++I+L T+ VK+LF+PL  K Y S   M+ +QP++ +LREK+K    Q L +
Sbjct: 348 DAYLHNYGVSIILLTILVKILFWPLTHKSYKSMKEMQKLQPRMAKLREKYKGDK-QKLNQ 406

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            M+ LYKT+ +NP+ GC P+++QIPVFFA+++V+   +E+RHAPF  WI DL+A D    
Sbjct: 407 EMMALYKTYKVNPMGGCLPMVVQIPVFFALFRVLGACIELRHAPFIFWINDLSAPDRLFH 466

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533
           F+    +PF  P +  + +  ++M  SMFIQ KM+P P D  QA I+ ++PV+F F   +
Sbjct: 467 FS--FQIPFMAPPY-GIPVLTLLMGASMFIQQKMTPSPGDPAQAKIMMFLPVIFTFMFIN 523

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKM 559
           FP+GL++YW  +N++SI QQ  I K 
Sbjct: 524 FPSGLVLYWLVNNLLSIGQQYRIYKK 549


>gi|26986751|ref|NP_742176.1| putative inner membrane protein translocase component YidC
           [Pseudomonas putida KT2440]
 gi|60392875|sp|P0A140|OXAA_PSEPK RecName: Full=Inner membrane protein oxaA
 gi|60392876|sp|P0A141|OXAA_PSEPU RecName: Full=Inner membrane protein oxaA
 gi|24981341|gb|AAN65640.1|AE016190_6 inner membrane protein, 60 kDa [Pseudomonas putida KT2440]
 gi|45709|emb|CAA44417.1| unnamed protein product [Pseudomonas putida]
 gi|313496415|gb|ADR57781.1| OxaA [Pseudomonas putida BIRD-1]
          Length = 560

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 147/582 (25%), Positives = 247/582 (42%), Gaps = 49/582 (8%)

Query: 1   MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQ----------TVKQPNQ 48
           M+      +A    +S ++V  W + Y    +   N     +                  
Sbjct: 1   MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASAD 60

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
           V ++ A     + A        + +K   L  +I+  G     LNL  Y       +   
Sbjct: 61  VPSANAESSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPNIPF 120

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNAN 164
            L   +  +  Y A+     T       +   ++              +L     F +  
Sbjct: 121 QLF-DNGGERVYLAQSGLTGTDGPDARASGRPLYAAEQKSYQLADGQEQLVVDLKFSDNG 179

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGF 220
               +R       Y   +   + N S      +   ++ R      +++         G 
Sbjct: 180 VNYIKRFSFKRGEYDLNVSYLIDNQSGQAWNGNMFAQLKRDASGDPSSSTATGTATYLGA 239

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
                 +   +    DI+K S+     S  W+     Y+ + +IP+K  +   Q +   D
Sbjct: 240 ALWTASEPYKKVSMKDIDKGSLKEN-VSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--KD 296

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
               Y   ++   I++  G  + T+  L+AG K    +         P  E+ +D+G+ +
Sbjct: 297 SQGNYIIGYTGPVISVPAGGKVETSALLYAGPKIQSKLKELS-----PGLELTVDYGFLW 351

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+  L+
Sbjct: 352 FIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALK 411

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           E+F     Q + +AM++LYK   INPL GC PIL+Q+PVF A+Y V+  S+EMR AP+  
Sbjct: 412 ERFGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWIL 470

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           WI DL+  DP                     I PIIM  +MFIQ +++P P D  QA ++
Sbjct: 471 WITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAKVM 511

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
             MP++F F    FPAGL++YW  +N +SI QQ  I +   A
Sbjct: 512 KMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEA 553


>gi|148550509|ref|YP_001270611.1| putative inner membrane protein translocase component YidC
           [Pseudomonas putida F1]
 gi|166977400|sp|A5WBB7|OXAA_PSEP1 RecName: Full=Inner membrane protein oxaA
 gi|148514567|gb|ABQ81427.1| protein translocase subunit yidC [Pseudomonas putida F1]
          Length = 560

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 147/582 (25%), Positives = 247/582 (42%), Gaps = 49/582 (8%)

Query: 1   MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQ----------TVKQPNQ 48
           M+      +A    +S ++V  W + Y    +   N     +                  
Sbjct: 1   MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASAD 60

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
           V ++ A     + A        + +K   L  +I+  G     LNL  Y       +   
Sbjct: 61  VPSANAESSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPNIPF 120

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNAN 164
            L   +  +  Y A+     T       +   ++              +L     F +  
Sbjct: 121 QLF-DNGGERVYLAQSGLTGTDGPDARASGRPLYAAEQKSYQLADGQEQLVVDLKFSDNG 179

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGF 220
               +R       Y   +   + N S      +   ++ R      +++         G 
Sbjct: 180 VNYIKRFSFKRGEYDLNVSYLIDNQSGQAWSGNMFAQLKRDASGDPSSSTATGTATYLGA 239

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
                 +   +    DI+K S+     S  W+     Y+ + +IP+K  +   Q +   D
Sbjct: 240 ALWTASEPYKKVSMKDIDKGSLKEN-VSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--KD 296

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
               Y   ++   I++  G  + T+  L+AG K    +         P  E+ +D+G+ +
Sbjct: 297 SQGNYIIGYTGPVISVPAGGKVETSALLYAGPKIQSKLKELS-----PGLELTVDYGFLW 351

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+  L+
Sbjct: 352 FIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALK 411

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           E+F     Q + +AM++LYK   INPL GC PIL+Q+PVF A+Y V+  S+EMR AP+  
Sbjct: 412 ERFGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWIL 470

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           WI DL+  DP                     I PIIM  +MFIQ +++P P D  QA ++
Sbjct: 471 WITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAKVM 511

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
             MP++F F    FPAGL++YW  +N +SI QQ  I +   A
Sbjct: 512 KMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEA 553


>gi|167036430|ref|YP_001671661.1| putative inner membrane protein translocase component YidC
           [Pseudomonas putida GB-1]
 gi|189036357|sp|B0KRC1|OXAA_PSEPG RecName: Full=Inner membrane protein oxaA
 gi|166862918|gb|ABZ01326.1| 60 kDa inner membrane insertion protein [Pseudomonas putida GB-1]
          Length = 560

 Score =  363 bits (931), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 145/582 (24%), Positives = 244/582 (41%), Gaps = 49/582 (8%)

Query: 1   MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQ----------TVKQPNQ 48
           M+      +A    +S ++V  W + Y    +   N     +                  
Sbjct: 1   MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASAD 60

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
           V ++ A     + A        + +K   L  +I+  G     LNL  Y           
Sbjct: 61  VPSANAESSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPDIPF 120

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNAN 164
            L   +  +  Y A+             +   ++              +L     F +  
Sbjct: 121 QLF-DNGGERVYLAQSGLTGANGPDARASGRPLYAAEQKSYQLADGQEQLVVDLKFSDNG 179

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGF 220
               +R       Y   +   + N S      +   ++ R      +++         G 
Sbjct: 180 VNYIKRFSFKRGEYDLNVSYLIDNQSGQAWSGNMFAQLKRDASGDPSSSTATGTATYLGA 239

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
                 +   +    DI+K  +     S  W+     Y+ + +IP+K  +   Q +   D
Sbjct: 240 ALWTASEPYKKVSMKDIDKGGLKEN-VSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--KD 296

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
               Y   ++   I++  G  + T+  L+AG K    +         P  E+ +D+G+ +
Sbjct: 297 SQGNYIIGYTGPVISVPAGGKVETSAMLYAGPKIQSKLKELS-----PGLELTVDYGFLW 351

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+  L+
Sbjct: 352 FIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALK 411

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           E+F     Q + +AM++LYK   INPL GC PIL+Q+PVF A+Y V+  S+EMR AP+  
Sbjct: 412 ERFGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWML 470

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           WI DL+  DP                     I PIIM  +MFIQ +++P P D  QA ++
Sbjct: 471 WITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAKVM 511

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
             MP++F F    FPAGL++YW  +N +SI QQ  I +   A
Sbjct: 512 KMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEA 553


>gi|152983547|ref|YP_001351680.1| putative inner membrane protein translocase component YidC
           [Pseudomonas aeruginosa PA7]
 gi|166975880|sp|A6VF45|OXAA_PSEA7 RecName: Full=Inner membrane protein oxaA
 gi|150958705|gb|ABR80730.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 578

 Score =  363 bits (931), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 142/602 (23%), Positives = 242/602 (40%), Gaps = 69/602 (11%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   +  +     +S ++V  W   Y  P +   +      Q +        + + V  
Sbjct: 1   MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMNTTQGLPDTPSAAGTSSDVPT 60

Query: 59  DDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
                A S +           +++K   L  +I+ +G     L L  Y   +        
Sbjct: 61  AQSGAAGSEAADKPVAVSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFP 120

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANN 165
           L   +  +  Y A+                 +++   G         +L     F     
Sbjct: 121 LF-DNGRERTYLAQSGLTGADGPDASSAGRPLFHSAQGSYQLADGQNELVVDLSFSRDGV 179

Query: 166 ILFERTIS---------------------LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR 204
              +R                         +  Y   +   + N S      +   ++ R
Sbjct: 180 NYIKRFTFHRGLKADCSDKEKAQKKIECINENAYQVGVSYLIDNQSGKTWSGNLFAQLKR 239

Query: 205 HKPQTATNT----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWA 260
                 ++T         G      D    +    D++K           W+     Y+ 
Sbjct: 240 DGSADPSSTTATGVSTYLGAAVWTPDSPYKKISTKDMDKEQFKE-SVQGGWVAWLQHYFV 298

Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320
           + ++P+K        +   DG   Y   F+   +++  G  + T   L+AG K    +  
Sbjct: 299 TAWVPTKGEQHQVMTR--KDGQGNYIVGFTGPTLSVPAGGKVETDLTLYAGPKLQKHLKE 356

Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
                  P  E+ +D+G+ +FIA+P+F L+ + ++L+GN+G +I+  TV +KL FFPL+ 
Sbjct: 357 LS-----PGLELTVDYGFLWFIAQPIFWLLQHIHSLIGNWGWSIIALTVLIKLAFFPLSA 411

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
             Y S A M+ + PK+  ++E+      Q + +AM++LYK   INPL GC PIL+Q+PVF
Sbjct: 412 ASYRSMARMRAVSPKMQAIKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVF 470

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            ++Y V+  S+EMR AP+ GWI DL+  DP                     I PI+M  +
Sbjct: 471 LSLYWVLLESVEMRQAPWLGWITDLSVKDPFF-------------------ILPIVMGGT 511

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
           M IQ  ++P P D  QA ++  MP++F F    FPAGL++YW  +NV+SI QQ  I +  
Sbjct: 512 MLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLWFPAGLVLYWVVNNVLSIAQQWYITRKI 571

Query: 561 GA 562
            A
Sbjct: 572 EA 573


>gi|170724369|ref|YP_001752057.1| putative inner membrane protein translocase component YidC
           [Pseudomonas putida W619]
 gi|254773014|sp|B1JFV4|OXAA_PSEPW RecName: Full=Inner membrane protein oxaA
 gi|169762372|gb|ACA75688.1| 60 kDa inner membrane insertion protein [Pseudomonas putida W619]
          Length = 560

 Score =  362 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 146/582 (25%), Positives = 242/582 (41%), Gaps = 49/582 (8%)

Query: 1   MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKN----------IQTVKQPNQ 48
           M+      +A    +S ++V  W + Y    +   N                        
Sbjct: 1   MDIKRTILIAALAIVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAANNGASAD 60

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
           V ++ A     + A        + +K   L  +I+  G     LNL  Y           
Sbjct: 61  VPSANAESSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPDIPF 120

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNAN 164
            L   +  +  Y A+                 ++              +L     F +  
Sbjct: 121 QLF-DNGGERVYLAQSGLTGANGPDARSTGRPLYAAEQKSFQLADGQEQLVVDLKFSDNG 179

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGF 220
               +R       Y   +   + N S      +   ++ R      +++         G 
Sbjct: 180 VNYIKRFSFKRGEYDLSVSYLIDNQSGQAWSGNMFAQLKRDASGDPSSSTATGTATYLGA 239

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
                 +   +    DI+K S+     S  W+     Y+ + +IP+K  +   Q +   D
Sbjct: 240 ALWTAGEPYKKVSMKDIDKGSLKEN-VSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--KD 296

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
               Y   ++   I++  G    T+  L+AG K    +         P  E+ +D+G+ +
Sbjct: 297 SQGNYIIGYTGPAISVPAGGKAETSAMLYAGPKIQSKLKELS-----PGLELTVDYGFLW 351

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+  L+
Sbjct: 352 FIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALK 411

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           E+F     Q + +AM++LYK   INPL GC PIL+Q+PVF A+Y V+  S+EMR AP+  
Sbjct: 412 ERFGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWML 470

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           WI DL+  DP                     I PIIM  +MFIQ +++P P D  QA ++
Sbjct: 471 WITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAKVM 511

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
             MP++F F    FPAGL++YW  +N +SI QQ  I +   A
Sbjct: 512 KMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEA 553


>gi|269958897|ref|YP_003328686.1| inner membrane protein translocase component YidC [Anaplasma
           centrale str. Israel]
 gi|269848728|gb|ACZ49372.1| inner membrane protein translocase component YidC [Anaplasma
           centrale str. Israel]
          Length = 572

 Score =  362 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 187/580 (32%), Positives = 308/580 (53%), Gaps = 21/580 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N  +A+  SV ++  W+  Y       +  E    + V   + +           
Sbjct: 1   MSEARNLVLAVVASVAVMVGWRFVYDK----VLTKESPQQREVASESLIPEVVDVAEYRP 56

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           RA A++  PRV L N +++ SI+LKGA  DD++L+ Y +    +S  V L+SP  T+   
Sbjct: 57  RADAVNSVPRVGLGNSNVLASISLKGALVDDVSLKKYQVSTDKHSENVVLMSPEGTQEDS 116

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIKLVFKNANNILFERTISLDEHY 178
             E  ++   +++++P+ +T+W +           +   L + N   ++F    SLD  Y
Sbjct: 117 IVEFGWIDPKHSVKVPDKSTLWEVEQNSAADGDGESHTTLRWDNGQGLVFRLKFSLDRAY 176

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
           +F +   V N++ + +  +  GRI +       + +   EG I   G + L E  Y D++
Sbjct: 177 MFSVSQEVENSTGEDLHLAYYGRINKAHAPDGKSYWISHEGAIGSFG-RGLQEWTYKDLQ 235

Query: 239 KSSISNFHESN----SWLGISDKYWASVFIPSKET-SFHSQFKYLS-DGHARYQAKFSAN 292
           K +             W+G++DKYW +  +PS        + K++  D    +Q  FS +
Sbjct: 236 KENSIRVAAHEVAGSHWIGLADKYWFAALVPSSGGGKLAFRAKHIPRDDVDHFQVDFSRS 295

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
              +  G     T  LF GAKE   +  Y   L IP F+  +D+G  YFI KP+F L+ Y
Sbjct: 296 YGLVPAGGKAEATTQLFIGAKELAVLDDYRSKLNIPLFDKAVDFGILYFITKPVFRLLQY 355

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
           F+ +VGNFG+AI++ T+ +KL+ FPLA K YVS   +K +QP+I  ++E +K      + 
Sbjct: 356 FHKVVGNFGLAIIMLTISIKLVVFPLASKSYVSMFKLKKLQPEISRIKELYKTDDV-RIG 414

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           K +  L++ H ++P++G  PIL+QIPVFFA+YKV+ +++EMRHAP   WI+DL++ D  N
Sbjct: 415 KEISSLFRKHGVSPVSGFLPILVQIPVFFALYKVLFVTIEMRHAPLCAWIQDLSSQDTAN 474

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVF 529
           +  LFG+L F  P  + +G+ PII+ ++M +Q K++       D     I+ ++P VFVF
Sbjct: 475 LLNLFGLLQFDPP--VCIGVLPIILGVTMVLQQKLNQQDQAAHDPY--GIMKFLPYVFVF 530

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
             SSFPAGL++YW  SNVI+I+QQ  + +       L++ 
Sbjct: 531 IFSSFPAGLVLYWICSNVITILQQLFVRRFIFDRRDLVNN 570


>gi|325275325|ref|ZP_08141278.1| membrane protein insertase [Pseudomonas sp. TJI-51]
 gi|324099573|gb|EGB97466.1| membrane protein insertase [Pseudomonas sp. TJI-51]
          Length = 560

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 143/582 (24%), Positives = 244/582 (41%), Gaps = 49/582 (8%)

Query: 1   MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQ----------TVKQPNQ 48
           M+      +A    +S ++V  W + Y    +   N     +                  
Sbjct: 1   MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASAD 60

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
           V ++ A     + A        + +K   L  +I+  G     LNL  Y           
Sbjct: 61  VPSANADSSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPDIPF 120

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNAN 164
            L   +  +  Y A+             +   ++              +L     F +  
Sbjct: 121 QLF-DNGGERVYLAQSGLTGANGPDARASGRPLYAAEQKSYQLADGQQQLVVDLKFSDNG 179

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGF 220
               +R       Y   +   + N S      +   ++ R      +++         G 
Sbjct: 180 VNYIKRFSFKRGEYDLNVSYLIDNQSSQPWSGNMFAQLKRDASGDPSSSTATGTATYLGA 239

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
                 +   +    D++K ++     S  W+     Y+ + +IP+K  +   Q +   D
Sbjct: 240 ALWTASEPYKKVSMKDMDKGNLKEN-VSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--KD 296

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
               Y   ++   + +  G  + T+  L+AG K    +         P  E+ +D+G+ +
Sbjct: 297 SQGNYIIGYTGPALNVPAGGKVETSAMLYAGPKIQSKLKELS-----PGLELTVDYGFLW 351

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+  L+
Sbjct: 352 FIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALK 411

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           E+F     Q + +AM++LYK   INPL GC PIL+Q+PVF A+Y V+  S+EMR AP+  
Sbjct: 412 ERFGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWML 470

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           WI DL+  DP                     I PIIM  +MFIQ +++P P D  QA ++
Sbjct: 471 WITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAKVM 511

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
             MP++F F    FPAGL++YW  +N +SI QQ  I +   A
Sbjct: 512 KMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEA 553


>gi|107104669|ref|ZP_01368587.1| hypothetical protein PaerPA_01005748 [Pseudomonas aeruginosa PACS2]
          Length = 578

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 140/602 (23%), Positives = 242/602 (40%), Gaps = 69/602 (11%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   +  +     +S ++V  W   Y  P +   +      Q +        + + V  
Sbjct: 1   MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMNTTQGLPDTPSASGTSSDVPT 60

Query: 59  DDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
              + A S +           +++K   L  +I+ +G     L L  Y   +        
Sbjct: 61  AQSSAAGSEAADKPVAVSGKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFP 120

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANN 165
           L   +  +  Y A+                 +++             +L     F +   
Sbjct: 121 LF-DNGRERTYLAQSGLTGADGPDASSAGRPLFHSAQSSYQLADGQNELVVDLSFSHDGV 179

Query: 166 ILFERTIS---------------------LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR 204
              +R                         +  Y   +   + N S      +   ++ R
Sbjct: 180 NYIKRFTFHRGLKADCSDKEKAQKKIECINENAYQVGVSYLIDNQSGKTWSGNLFAQLKR 239

Query: 205 HKPQTATNT----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWA 260
                 ++T         G      D    +    D++K           W+     Y+ 
Sbjct: 240 DGSADPSSTTATGVSTYLGAAVWTPDSPYKKISTKDMDKEQFKE-SVQGGWVAWLQHYFV 298

Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320
           + ++P+K        +   DG   Y   F+   +++  G  + T   L+AG K    +  
Sbjct: 299 TAWVPTKGEQHQVMTR--KDGQGNYIVGFTGPTLSVPAGSKVETDLTLYAGPKLQKHLKE 356

Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
                  P  E+ +D+G+ +FIA+P+F L+ + ++L+GN+G +I+  TV +KL FFPL+ 
Sbjct: 357 LS-----PGLELTVDYGFLWFIAQPIFWLLQHIHSLIGNWGWSIIALTVLIKLAFFPLSA 411

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
             Y S A M+ + PK+  ++E+      Q + +AM++LYK   INPL GC PIL+Q+PVF
Sbjct: 412 ASYRSMARMRAVSPKMQAIKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVF 470

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            ++Y V+  S+EMR AP+ GWI DL+  DP                     I PI+M  +
Sbjct: 471 LSLYWVLLESVEMRQAPWLGWITDLSVKDPFF-------------------ILPIVMGGT 511

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
           M IQ  ++P P D  QA ++  MP++F F    FPAGL++YW  +N +SI QQ  I +  
Sbjct: 512 MLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKI 571

Query: 561 GA 562
            A
Sbjct: 572 EA 573


>gi|222475049|ref|YP_002563464.1| 60kD inner-membrane protein (yidC) [Anaplasma marginale str.
           Florida]
 gi|255004151|ref|ZP_05278952.1| putative inner membrane protein translocase component YidC
           [Anaplasma marginale str. Virginia]
 gi|56387916|gb|AAV86503.1| 60 kD inner-membrane protein [Anaplasma marginale str. St. Maries]
 gi|222419185|gb|ACM49208.1| 60kD inner-membrane protein (yidC) [Anaplasma marginale str.
           Florida]
          Length = 647

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 192/579 (33%), Positives = 317/579 (54%), Gaps = 19/579 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N  +A+  SV ++  W+  Y    ++E   +++    V   + +  +        
Sbjct: 76  MSEARNLVLAVVASVAVMVGWRFVYERVLVKEYPQQQRE---VVSESLIPEAMDVAEYRP 132

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           R  A++  PRV L N S+  SI+LKGA  DD++L  Y +    +S  V L+SP  T+   
Sbjct: 133 RVDAINSVPRVRLGNTSVRASISLKGALVDDVSLTKYQVSTDKHSENVVLMSPEGTREDS 192

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             E  ++   +  ++P+ NT+W +  G   +      L + N   ++F    S+D  Y+F
Sbjct: 193 IVEFGWIDPEHKTKVPDKNTLWEVEQGSEASGEGSATLRWDNGQGLVFRLRFSIDRAYMF 252

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
            +   V N++ + +R S  GRI +   Q   + +   EG I   G   L E  Y D++K 
Sbjct: 253 SVSQEVENSTGEDLRLSYYGRINKAHAQDGKSYWISHEGAIGSFGH-GLQEWTYKDMQKG 311

Query: 241 SISNFHESN-----SWLGISDKYWASVFIPSKET-SFHSQFKYLS-DGHARYQAKFSANE 293
           S +    +N      W+G++DKYW +  +PS +      + K++  +    +Q  FS + 
Sbjct: 312 SGARVGATNEGTGSHWIGLADKYWFTALVPSSDKGKLAFRAKHVPRNDVDHFQVDFSRSY 371

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
            TI  G    +T  LF GAKE   + +Y   L IP F+  +D+G  YFI KP+F L+ YF
Sbjct: 372 GTIPAGGKAESTTQLFIGAKELAVLDNYRSGLNIPLFDKAVDFGVLYFITKPVFQLLQYF 431

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           + +VGNFG+AI++ T+ +KL+ FPL+ K YVS   +K +QP+I  +RE   ++    + K
Sbjct: 432 HKVVGNFGLAIVMLTIAIKLVVFPLSSKSYVSMFKLKKLQPEISRIRE-LHKTDDVRISK 490

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            +  L++ H ++P++G  PIL+QIPVFFA+YKV+ +++EMRHAP + WI+DL++ D  N+
Sbjct: 491 EISALFRKHGVSPMSGFLPILVQIPVFFALYKVLFVTIEMRHAPLFAWIQDLSSHDTANL 550

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFA 530
             LFG+L F  P  + VG+ PII+ ++M +Q K++       D     ++ ++P VFVF 
Sbjct: 551 LNLFGLLRFEPP--ICVGVLPIILGITMVLQQKINQQDQATQDPY--GVMKFLPYVFVFI 606

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            SSFPAGL++YW  SNVI+++QQ  + +       L++ 
Sbjct: 607 FSSFPAGLVLYWICSNVITMLQQLFVRRFIFDRRDLVNN 645


>gi|116053719|ref|YP_794046.1| putative inner membrane protein translocase component YidC
           [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894670|ref|YP_002443540.1| putative inner membrane protein translocase component YidC
           [Pseudomonas aeruginosa LESB58]
 gi|296392435|ref|ZP_06881910.1| putative inner membrane protein translocase component YidC
           [Pseudomonas aeruginosa PAb1]
 gi|313111480|ref|ZP_07797281.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa
           39016]
 gi|122256261|sp|Q02DE0|OXAA_PSEAB RecName: Full=Inner membrane protein oxaA
 gi|254773013|sp|B7V7A5|OXAA_PSEA8 RecName: Full=Inner membrane protein oxaA
 gi|115588940|gb|ABJ14955.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218774899|emb|CAW30718.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa
           LESB58]
 gi|310883783|gb|EFQ42377.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa
           39016]
          Length = 578

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 140/602 (23%), Positives = 242/602 (40%), Gaps = 69/602 (11%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   +  +     +S ++V  W   Y  P +   +      Q +        + + V  
Sbjct: 1   MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMNTTQGLPDTPSASGTSSDVPT 60

Query: 59  DDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
              + A S +           +++K   L  +I+ +G     L L  Y   +        
Sbjct: 61  AQSSAAGSEAADKPVAVSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFP 120

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANN 165
           L   +  +  Y A+                 +++             +L     F +   
Sbjct: 121 LF-DNGRERTYLAQSGLTGADGPDASSAGRPLFHSAQSSYQLADGQNELVVDLSFSHDGV 179

Query: 166 ILFERTIS---------------------LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR 204
              +R                         +  Y   +   + N S      +   ++ R
Sbjct: 180 NYIKRFTFHRGLKADCSDKEKAQKKIECINENAYQVGVSYLIDNQSGKTWSGNLFAQLKR 239

Query: 205 HKPQTATNT----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWA 260
                 ++T         G      D    +    D++K           W+     Y+ 
Sbjct: 240 DGSADPSSTTATGVSTYLGAAVWTPDSPYKKISTKDMDKEQFKE-SVQGGWVAWLQHYFV 298

Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320
           + ++P+K        +   DG   Y   F+   +++  G  + T   L+AG K    +  
Sbjct: 299 TAWVPTKGEQHQVMTR--KDGQGNYIVGFTGPTLSVPAGSKVETDLTLYAGPKLQKHLKE 356

Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
                  P  E+ +D+G+ +FIA+P+F L+ + ++L+GN+G +I+  TV +KL FFPL+ 
Sbjct: 357 LS-----PGLELTVDYGFLWFIAQPIFWLLQHIHSLIGNWGWSIIALTVLIKLAFFPLSA 411

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
             Y S A M+ + PK+  ++E+      Q + +AM++LYK   INPL GC PIL+Q+PVF
Sbjct: 412 ASYRSMARMRAVSPKMQAIKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVF 470

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            ++Y V+  S+EMR AP+ GWI DL+  DP                     I PI+M  +
Sbjct: 471 LSLYWVLLESVEMRQAPWLGWITDLSVKDPFF-------------------ILPIVMGGT 511

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
           M IQ  ++P P D  QA ++  MP++F F    FPAGL++YW  +N +SI QQ  I +  
Sbjct: 512 MLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKI 571

Query: 561 GA 562
            A
Sbjct: 572 EA 573


>gi|56477030|ref|YP_158619.1| preprotein translocase subunit yidC [Aromatoleum aromaticum EbN1]
 gi|81677486|sp|Q5P4P4|OXAA_AZOSE RecName: Full=Inner membrane protein oxaA
 gi|56313073|emb|CAI07718.1| preprotein translocase subunit yidC [Aromatoleum aromaticum EbN1]
          Length = 550

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 140/578 (24%), Positives = 248/578 (42%), Gaps = 44/578 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT-----VKQPNQVDNSYAAV 56
                  + +  S+ +V  W  +    +                           +  AV
Sbjct: 1   MDQRRLVLFLVFSLSLVMLWNAWLKQSQPAPTAVTATAGVEGAGVPTPTTGVAPGATTAV 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
                A   S +PR+ ++   ++  ++ +G     L L  +          V  L    T
Sbjct: 61  PGVPGAATASTAPRMVVRTDLMVAEVSAQGGDIVRLELAQHKATADKTKNFV--LFDDGT 118

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD- 175
            + Y A+   +                    K       ++L     + +   + ++   
Sbjct: 119 IHLYAAQSGLIGEDLPTHKTTFALPQGEQVLKEGEDRLVVRLEAPEQDGVKVTKVMTFHR 178

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT---FGVQEGFIAVLGDKSLVEQ 232
            +YL  +   + N+S   +      ++ R      +          G       +   + 
Sbjct: 179 GNYLVDVAYEIVNSSERTLSPHAYYQLTRDGKPAESVEAFGVTTFTGPAFYTDAEKFQKV 238

Query: 233 KYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
           ++ +I +       + S+ W+ +   Y+ S ++P   T    +F     G+  Y A    
Sbjct: 239 QFEEIAEGKAKFVKKASDGWIAMVQHYFVSAWLPQGGTER--EFFAQKVGNDLYSAGVIV 296

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
               I PG+S      L+AG +E   +         P  ++++D+GW   IA P+F ++S
Sbjct: 297 PVAAIQPGQSGRVEASLYAGPQEQDKLEDIA-----PGLDLVVDYGWLTVIAAPLFWVLS 351

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           + + +VGN+G AI++ T+ +KL+FFPL+   Y S A M+ + P++  L+E +     ++ 
Sbjct: 352 WIHGVVGNWGWAIIIVTILIKLMFFPLSAASYKSMAKMRVLGPRMQRLKELYGNDKAKM- 410

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
           Q+ M+++Y+   INPL GC PIL+QIPVF ++Y V+  S+EMR AP+ GWI+DL+A DP 
Sbjct: 411 QQEMMEMYRKEKINPLGGCLPILVQIPVFISLYWVLLGSVEMRQAPWLGWIQDLSAKDPY 470

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531
                               I P+IM +SM IQMK++P P D  QA ++  MPV+F F  
Sbjct: 471 F-------------------ILPVIMGVSMLIQMKLNPTPPDPIQAKVMMAMPVIFTFMF 511

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK-----MHGAEI 564
             FP+GL++YW  +N++SI QQ  I +       GA+ 
Sbjct: 512 LWFPSGLVLYWVVNNILSIAQQWQITRMIESEKSGAKP 549


>gi|255003028|ref|ZP_05277992.1| putative inner membrane protein translocase component YidC
           [Anaplasma marginale str. Puerto Rico]
          Length = 647

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 192/579 (33%), Positives = 317/579 (54%), Gaps = 19/579 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N  +A+  SV ++  W+  Y    ++E   +++    V   + +  +        
Sbjct: 76  MSEARNLVLAVVASVAVMVGWRFVYERVLVKEYPQQQRE---VVSESLIPEAMDVAEYRP 132

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           R  A++  PRV L N S+  SI+LKGA  DD++L  Y +    +S  V L+SP  T+   
Sbjct: 133 RVDAINSVPRVRLGNTSVRASISLKGALVDDVSLTKYQVSTDKHSENVVLMSPEGTREDS 192

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             E  ++   +  ++P+ NT+W +  G   +      L + N   ++F    S+D  Y+F
Sbjct: 193 IVEFGWIDPEHKTKVPDKNTLWEVEQGSEASGEGSATLRWDNGQGLVFRLRFSIDRAYMF 252

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
            +   V N++ + +R S  GRI +   Q   + +   EG I   G   L E  Y D++K 
Sbjct: 253 SVSQEVENSTGEDLRLSYYGRINKAHAQDGKSYWISHEGAIGSFGH-GLQEWTYKDMQKG 311

Query: 241 SISNFHESN-----SWLGISDKYWASVFIPSKET-SFHSQFKYLS-DGHARYQAKFSANE 293
           S +    +N      W+G++DKYW +  +PS +      + K++  +    +Q  FS + 
Sbjct: 312 SGARVGATNEGTGSHWIGLADKYWFTALVPSSDKGKLAFRAKHVPRNDVDHFQVDFSRSY 371

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
            TI  G    +T  LF GAKE   + +Y   L IP F+  +D+G  YFI KP+F L+ YF
Sbjct: 372 GTIPAGGKAESTTQLFIGAKELAVLDNYRSGLNIPLFDKAVDFGVLYFITKPVFQLLQYF 431

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           + +VGNFG+AI++ T+ +KL+ FPL+ K YVS   +K +QP+I  +RE   ++    + K
Sbjct: 432 HKVVGNFGLAIVMLTIAIKLVVFPLSSKSYVSMFKLKKLQPEISRIRE-LHKTDDVRISK 490

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            +  L++ H ++P++G  PIL+QIPVFFA+YKV+ +++EMRHAP + WI+DL++ D  N+
Sbjct: 491 EISALFRKHGVSPMSGFLPILVQIPVFFALYKVLFVTIEMRHAPLFAWIQDLSSHDTANL 550

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFA 530
             LFG+L F  P  + VG+ PII+ ++M +Q K++       D     ++ ++P VFVF 
Sbjct: 551 LNLFGLLRFEPP--ICVGVLPIILGITMVLQQKINQQDQATQDPY--GVMKFLPYVFVFI 606

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            SSFPAGL++YW  SNVI+++QQ  + +       L++ 
Sbjct: 607 FSSFPAGLVLYWICSNVITMLQQLFVRRFIFDRRDLVNN 645


>gi|15600761|ref|NP_254255.1| inner membrane protein translocase component YidC [Pseudomonas
           aeruginosa PAO1]
 gi|38503188|sp|Q9HT06|OXAA_PSEAE RecName: Full=Inner membrane protein oxaA
 gi|9951909|gb|AAG08953.1|AE004968_7 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
          Length = 578

 Score =  361 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 140/602 (23%), Positives = 241/602 (40%), Gaps = 69/602 (11%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   +  +     +S ++V  W   Y  P +   +      Q +        + + V  
Sbjct: 1   MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMNTTQGLPDTPSASGTSSDVPT 60

Query: 59  DDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
              + A S +           +++K   L  +I+ +G     L L  Y   +        
Sbjct: 61  AQSSAAGSEAADKPVAVSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFP 120

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANN 165
           L   +  +  Y A+                 ++              +L     F +   
Sbjct: 121 LF-DNGRERTYLAQSGLTGADGPDASSAGRPLFRSAQSSYQLADGQNELVVDLSFSHDGV 179

Query: 166 ILFERTIS---------------------LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR 204
              +R                         +  Y   +   + N S      +   ++ R
Sbjct: 180 NYIKRFTFHRGLKADCSDKEKAQKKIECINENAYQVGVSYLIDNQSGKTWSGNLFAQLKR 239

Query: 205 HKPQTATNT----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWA 260
                 ++T         G      D    +    D++K           W+     Y+ 
Sbjct: 240 DGSADPSSTTATGVSTYLGAAVWTPDSPYKKISTKDMDKEQFKE-SVQGGWVAWLQHYFV 298

Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320
           + ++P+K        +   DG   Y   F+   +++  G  + T   L+AG K    +  
Sbjct: 299 TAWVPTKGEQHQVMTR--KDGQGNYIVGFTGPTLSVPAGSKVETDLTLYAGPKLQKHLKE 356

Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
                  P  E+ +D+G+ +FIA+P+F L+ + ++L+GN+G +I+  TV +KL FFPL+ 
Sbjct: 357 LS-----PGLELTVDYGFLWFIAQPIFWLLQHIHSLIGNWGWSIIALTVLIKLAFFPLSA 411

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
             Y S A M+ + PK+  ++E+      Q + +AM++LYK   INPL GC PIL+Q+PVF
Sbjct: 412 ASYRSMARMRAVSPKMQAIKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVF 470

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            ++Y V+  S+EMR AP+ GWI DL+  DP                     I PI+M  +
Sbjct: 471 LSLYWVLLESVEMRQAPWLGWITDLSVKDPFF-------------------ILPIVMGGT 511

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
           M IQ  ++P P D  QA ++  MP++F F    FPAGL++YW  +N +SI QQ  I +  
Sbjct: 512 MLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKI 571

Query: 561 GA 562
            A
Sbjct: 572 EA 573


>gi|58040258|ref|YP_192222.1| putative inner membrane protein translocase component YidC
           [Gluconobacter oxydans 621H]
 gi|58002672|gb|AAW61566.1| 60 kD inner membrane protein OxaA [Gluconobacter oxydans 621H]
          Length = 575

 Score =  361 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 180/575 (31%), Positives = 293/575 (50%), Gaps = 13/575 (2%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
                   A  LS +I+  +  F   P  ++ +          Q +    +         
Sbjct: 1   MDTKRIIAATLLSALILIGFDYFMPKPHQDDPHPVTHAPAAQVQNSAPTTAAPPAEAATE 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
            QA   + R+ +  P + GS+NLKGA  DDL L  Y   ++ +SP+V LL  + + +  F
Sbjct: 61  TQA--TARRIPVTGPDVQGSLNLKGAVLDDLILMKYRETLAKDSPLVRLLDKAGSAHPTF 118

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181
             + + +   +             S + LTP  P+ L + N   ++F   I+LDEHY+F 
Sbjct: 119 VVIGWTNAPGSNARLPDLNTVWESSDETLTPDHPVTLHWDNGQGLVFSIQIALDEHYMFA 178

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
           +  TV N+S   +   P  R+ R            +     + G       K        
Sbjct: 179 VSQTVENHSGQPVALVPFERVQRDYDAPEGAFTAHEGPIAVIGGRMQDESYKNLRKGADH 238

Query: 242 ISNF----HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF-SANEITI 296
             +       +N W GISDK+W +   P+  T   + F Y+      YQ    + N   I
Sbjct: 239 PDHVSWSSTGTNGWDGISDKFWLTAVAPADGTPVAASFAYVPGTPGSYQVGMSTQNAQQI 298

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
           +P  SIT  + +FAGAK    +  Y K L IP  +  ID+GWF F+ +P+  L+ + Y  
Sbjct: 299 MPNGSITEKSHVFAGAKVVSLLQGYSKQLGIPDLDKAIDFGWFSFLTRPLLTLLHWLYLH 358

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           +GNFG+A+M  T+ VK++ FPLA K   S+A M+ + PK+ E+REK K   P  + + ++
Sbjct: 359 LGNFGLALMALTLIVKIVLFPLASKAAQSSARMRLLAPKVKEIREKNKD-DPMAMNQKVM 417

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            LY+   ++P +GC P+L+Q P+FF +YK+++IS++ RHAPF+GWI DL+  DPTN+F L
Sbjct: 418 ALYREEKVSPASGCLPMLIQAPIFFCLYKILNISIDARHAPFFGWIHDLSMPDPTNVFNL 477

Query: 477 FGILPFYL---PGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFAL 531
           FG+LPF       F+HV IW   + L+ ++  + +   A  D  QA ++ +MP+V+VF +
Sbjct: 478 FGLLPFDPTHYSSFLHVSIWGTALGLTFWLLQRQTSSTASLDPAQARMMQFMPLVYVFFM 537

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           S FPA L++Y++W+N++++ QQ  I +  G  + +
Sbjct: 538 SGFPASLLVYYTWNNLLTVAQQMFIQRRTGLPVPV 572


>gi|121998020|ref|YP_001002807.1| 60 kDa inner membrane insertion protein [Halorhodospira halophila
           SL1]
 gi|166975869|sp|A1WWE3|OXAA_HALHL RecName: Full=Inner membrane protein oxaA
 gi|121589425|gb|ABM62005.1| protein translocase subunit yidC [Halorhodospira halophila SL1]
          Length = 550

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 149/568 (26%), Positives = 256/568 (45%), Gaps = 36/568 (6%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME      + IAL   S+++ +AW+   + P  E +  E+++    + P+    +     
Sbjct: 1   MENQR-LILLIALAGISLLLYFAWEREQMDPA-EPVVEEQESEVDQEAPDAPSRAEEPDA 58

Query: 58  IDDRAQAL-----SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
            D  A+ +       + RV +K   +   I+ +G     L+L  +       +P   L  
Sbjct: 59  GDPMAEGVVDPDDEDAKRVRVKTDLIEAEISTQGGDIRQLDLLKHQKASDDPTPYRLLRD 118

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
                    A L     A   +             +    T  + L+++     + +   
Sbjct: 119 EGEPLFVAQAGLGGDGPAPGRDARYEVDQDEFELAEGE-DTLEVPLIWEEDGVKVRKVYT 177

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA--VLGDKSLV 230
              + YL  +   V NN+ D        ++ R      T  + +           +    
Sbjct: 178 FRRDSYLVDVRHEVENNAEDDWAGFQYVQLRRRPDPAGTTPWYIHSFTGGSLYTQEDRFS 237

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
              +SD+E S +S   E + W  +   Y+  V IP +  ++    + L      Y    S
Sbjct: 238 RISFSDMEDSDLSQ-DERDGWAAMLQHYFLGVMIPERGETYRYYTRALP--QETYLLGMS 294

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
           +  + +  G+S   TN LF G KE   +      L +    + +D+G+   +A P+F  +
Sbjct: 295 SPWLQVAAGESGQKTNHLFVGPKEQDRLTAVGSALDVDDLRLTVDYGFLTILANPLFWAL 354

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
               NLV N+G+AI++ T+ +K+ F+ L+   Y S A M+ +QPK+ ++RE++     Q+
Sbjct: 355 DQIENLVKNWGVAILILTLLIKIAFYKLSAISYRSMAKMRKVQPKMQQIRERYSDDRQQM 414

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
             +A+++LYK   INPL GC PIL+QIPVF A+Y V+  S+E+RHAPF  WI+DL++ DP
Sbjct: 415 -NQALMELYKKEKINPLGGCLPILVQIPVFIALYWVLVESVELRHAPFMLWIQDLSSRDP 473

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I P++M  SM +QMK++PPP D  Q  ++  +P VF   
Sbjct: 474 YF-------------------ILPLLMGASMLVQMKLNPPPMDPIQKRVMQVLPFVFTGF 514

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              FPAGL++YW  +N++SI QQ  I++
Sbjct: 515 FMLFPAGLVLYWLTNNILSIAQQWYILR 542


>gi|260912766|ref|ZP_05919252.1| YidC/Oxa1 family membrane protein insertase [Pasteurella dagmatis
           ATCC 43325]
 gi|260633144|gb|EEX51309.1| YidC/Oxa1 family membrane protein insertase [Pasteurella dagmatis
           ATCC 43325]
          Length = 541

 Score =  360 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 150/570 (26%), Positives = 254/570 (44%), Gaps = 43/570 (7%)

Query: 1   MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   +      + +S ++   WQ  Y  P+           + VK  + V  S  +   
Sbjct: 1   MDSRRSLLVIALLFISFLVYQQWQLDYHTPKPV-------VTEQVKVSSDVPASSTSSTS 53

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           D    A      + L+N  L   ++  G       L  +  ++ SN+P   L +  N  +
Sbjct: 54  DIATTAQIQGRVITLENDVLRLKVDTLGGDVIHSELLKHDAELDSNTPFTLLTNKQN--H 111

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILFERTISLD 175
            Y A+   V     I+       + +            +LV       + + F +   L 
Sbjct: 112 VYIAQSGLVGKDG-IDTKAGRASYQVEGDAFKLAEGQNELVVPLVFEKDGVTFRKVFVLK 170

Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
            + Y   +   + N S   I   P G++     +   N         A    ++  ++  
Sbjct: 171 RNAYDISVNFEIDNQSEKAIEVEPYGQLRHTLVEDTGNVAMPTYTGGAYSSSETNYKKYS 230

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
            D  + +         W+ +   Y+ S +IP+++      +      +      +     
Sbjct: 231 FDEMQKANLAVSTKAGWVAVLQHYFVSAWIPNQDADNQL-YSLTDKANNLASIGYRGPTT 289

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
            I  G   T T+ L+ G K    +            ++ +D+GW +FIAKP+F L+++  
Sbjct: 290 VISAGAKETITSSLWTGPKLQDQMAAVAN-----HLDLTVDYGWAWFIAKPLFWLLTFIQ 344

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++V N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + 
Sbjct: 345 SIVHNWGLAIIGVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERF-GEDRQRMSQE 403

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP    
Sbjct: 404 MMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY-- 461

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I PI+M  SMF+  KMSP P AD  Q  I+N+MP++F+     
Sbjct: 462 -----------------ILPILMGASMFLLQKMSPTPVADPMQQKIMNFMPLIFMVFFLW 504

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+I+I QQ +I +    +
Sbjct: 505 FPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|262166780|ref|ZP_06034517.1| OxaI/YidC membrane insertion protein [Vibrio mimicus VM223]
 gi|262026496|gb|EEY45164.1| OxaI/YidC membrane insertion protein [Vibrio mimicus VM223]
          Length = 541

 Score =  360 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 142/570 (24%), Positives = 249/570 (43%), Gaps = 41/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         ++             +        +
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A++ +  + + +  L  SI+  G       L  Y  ++ S+ P V L +     + +
Sbjct: 60  ---AVAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYSEELDSSEPFVLLQNTQG--HQF 114

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V         N+   + + +             I + ++       +  I    
Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVNADSFSLAEGQDELRIPMTYQANGIDYTKTFILKRG 174

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +V  V NNS +         + ++   +  N       G      D    +  + 
Sbjct: 175 SYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234

Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S     + +W+ +   Y+AS +IP  E       + +++              
Sbjct: 235 DMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+  L+S+  
Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAAVA-----PNLDLVVDYGWLWFIAKPLHWLLSFIQ 346

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 347 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536


>gi|262172772|ref|ZP_06040450.1| OxaI/YidC membrane insertion protein [Vibrio mimicus MB-451]
 gi|261893848|gb|EEY39834.1| OxaI/YidC membrane insertion protein [Vibrio mimicus MB-451]
          Length = 541

 Score =  360 bits (922), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 142/570 (24%), Positives = 248/570 (43%), Gaps = 41/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         ++             +        +
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A + +  + + +  L  SI+  G       L  Y  ++ S+ P V L +     + +
Sbjct: 60  ---AAAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYSEELDSSEPFVLLQNTQG--HQF 114

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V         N+   + + +             I + ++       +  I    
Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVNADSFSLAEGQDELRIPMTYQANGIDYTKTFILKRG 174

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +V  V NNS +         + ++   +  N       G      D    +  + 
Sbjct: 175 SYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234

Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S     + +W+ +   Y+AS +IP  E       + +++              
Sbjct: 235 DMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+  L+S+  
Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAAVA-----PNLDLVVDYGWLWFIAKPLHWLLSFIQ 346

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 347 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536


>gi|330831724|ref|YP_004394676.1| inner membrane protein oxaA [Aeromonas veronii B565]
 gi|328806860|gb|AEB52059.1| Inner membrane protein oxaA [Aeromonas veronii B565]
          Length = 548

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 138/573 (24%), Positives = 245/573 (42%), Gaps = 41/573 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +                QT     +   +     + +
Sbjct: 1   MESQRNLLL-IGLLFVSFLLWQQW--ESDKAPKPAPTTVAQTEHFVPEAGQTGDIPQVSE 57

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           +A A +    + + +  L  +++ +G       L  + L+   + P V L   S  ++ Y
Sbjct: 58  QANATAARKLITVSSDVLKLTLDTQGGDVVSAELLSHKLEEGKDQPFVLL--TSKPEHLY 115

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175
            A+   V              +                 + + + ++  ++F +   L  
Sbjct: 116 IAQSGLVGRNGPDSQAEGRPTYEAAQTSYQLADGQDQVVVPMTWTDSKGVVFTKEFILKR 175

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             Y   +   + N S + ++    G++ +                    G  S  + +Y 
Sbjct: 176 GDYAVGVDYKIDNKSAEPVQVQFYGQLKQTVATPKDQEGHAMVASAYRGGAFSTEDTRYK 235

Query: 236 DIEKSSISNFHESN----SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
                 + +   +      W+ +   Y+ S + P+ +   +S +  +  G  +    + A
Sbjct: 236 KYTFDEMKDADLNKTTKGGWVAMLQHYFVSAWAPNAD-DTNSFYSRVIPGKGQAIIGYKA 294

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
             + +  G+    T+ L+ G K    +            ++ +D+GW +FIA+P+  L++
Sbjct: 295 PLVDVAAGQQAEVTSKLWVGPKLQDQMAKVAN-----HLDLTVDYGWLWFIAQPLHWLLT 349

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
            F+  V N+G+AI++ T+ V+ + FPL K QY S A M+ +QPKI  LRE+F     Q +
Sbjct: 350 VFHGFVQNWGLAIIMLTLLVRGIMFPLTKAQYTSMAKMRMLQPKIAALRERFGD-DRQKM 408

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
            + M++LYK   +NPL GC PIL+Q+P+F A+Y  +  S+E+RHAPF  WI DL+  DP 
Sbjct: 409 SQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWALMESVELRHAPFALWITDLSVKDPF 468

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530
                               + PI+M  SM+   KMSP    D  Q  ++ +MP++F F 
Sbjct: 469 F-------------------VLPILMGASMWYLQKMSPTTVTDPMQQKVMQFMPIIFTFM 509

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
              FPAGL +YW  SNVISI+QQ +I +    +
Sbjct: 510 FLWFPAGLTLYWLVSNVISIIQQTIIYRQLEKK 542


>gi|262402088|ref|ZP_06078652.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC586]
 gi|262351734|gb|EEZ00866.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC586]
          Length = 541

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 142/570 (24%), Positives = 248/570 (43%), Gaps = 41/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         ++             +        +
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPTPQATQQAQSTGAAPAPSFSDELDPTPAQN 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A + +  + + +  L  SI+  G       L  Y  ++ S+ P V L +     + +
Sbjct: 60  ---AAAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYSEELDSSEPFVLLQNTQG--HQF 114

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V         N+   + + +             I + ++       +  I    
Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVNADSFSLAEGQDELRIPMTYQANGIEYTKTFILKRG 174

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +V  V NNS +         + ++   +  N       G      D    +  + 
Sbjct: 175 SYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234

Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S     + +W+ +   Y+AS +IP  E       + +++              
Sbjct: 235 DMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+  L+S+  
Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAAVA-----PNLDLVVDYGWLWFIAKPLHWLLSFIQ 346

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 347 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536


>gi|161544990|ref|YP_153758.2| putative inner membrane protein translocase component YidC
           [Anaplasma marginale str. St. Maries]
          Length = 572

 Score =  359 bits (921), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 192/579 (33%), Positives = 317/579 (54%), Gaps = 19/579 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N  +A+  SV ++  W+  Y    ++E   +++    V   + +  +        
Sbjct: 1   MSEARNLVLAVVASVAVMVGWRFVYERVLVKEYPQQQRE---VVSESLIPEAMDVAEYRP 57

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           R  A++  PRV L N S+  SI+LKGA  DD++L  Y +    +S  V L+SP  T+   
Sbjct: 58  RVDAINSVPRVRLGNTSVRASISLKGALVDDVSLTKYQVSTDKHSENVVLMSPEGTREDS 117

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             E  ++   +  ++P+ NT+W +  G   +      L + N   ++F    S+D  Y+F
Sbjct: 118 IVEFGWIDPEHKTKVPDKNTLWEVEQGSEASGEGSATLRWDNGQGLVFRLRFSIDRAYMF 177

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
            +   V N++ + +R S  GRI +   Q   + +   EG I   G   L E  Y D++K 
Sbjct: 178 SVSQEVENSTGEDLRLSYYGRINKAHAQDGKSYWISHEGAIGSFGH-GLQEWTYKDMQKG 236

Query: 241 SISNFHESN-----SWLGISDKYWASVFIPSKET-SFHSQFKYLS-DGHARYQAKFSANE 293
           S +    +N      W+G++DKYW +  +PS +      + K++  +    +Q  FS + 
Sbjct: 237 SGARVGATNEGTGSHWIGLADKYWFTALVPSSDKGKLAFRAKHVPRNDVDHFQVDFSRSY 296

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
            TI  G    +T  LF GAKE   + +Y   L IP F+  +D+G  YFI KP+F L+ YF
Sbjct: 297 GTIPAGGKAESTTQLFIGAKELAVLDNYRSGLNIPLFDKAVDFGVLYFITKPVFQLLQYF 356

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           + +VGNFG+AI++ T+ +KL+ FPL+ K YVS   +K +QP+I  +RE   ++    + K
Sbjct: 357 HKVVGNFGLAIVMLTIAIKLVVFPLSSKSYVSMFKLKKLQPEISRIRE-LHKTDDVRISK 415

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            +  L++ H ++P++G  PIL+QIPVFFA+YKV+ +++EMRHAP + WI+DL++ D  N+
Sbjct: 416 EISALFRKHGVSPMSGFLPILVQIPVFFALYKVLFVTIEMRHAPLFAWIQDLSSHDTANL 475

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFA 530
             LFG+L F  P  + VG+ PII+ ++M +Q K++       D     ++ ++P VFVF 
Sbjct: 476 LNLFGLLRFEPP--ICVGVLPIILGITMVLQQKINQQDQATQDPY--GVMKFLPYVFVFI 531

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            SSFPAGL++YW  SNVI+++QQ  + +       L++ 
Sbjct: 532 FSSFPAGLVLYWICSNVITMLQQLFVRRFIFDRRDLVNN 570


>gi|261856984|ref|YP_003264267.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Halothiobacillus neapolitanus c2]
 gi|261837453|gb|ACX97220.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Halothiobacillus neapolitanus c2]
          Length = 570

 Score =  359 bits (920), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 154/596 (25%), Positives = 253/596 (42%), Gaps = 57/596 (9%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFY-----------------VYPRIEEMNNERKNIQTVK 44
             N    + +AL  +++  WQ +                    P         K+I    
Sbjct: 1   MDNRRLILVVALGFVLISLWQAWTHDQSQSAQQTAATLQNAASPDSPAQPTAAKDIPATS 60

Query: 45  QPNQVDNSYAAVLIDDRAQALSMS-PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            P+      +AV     A+  S +   + +K   L   I+L+G   D+ +L  Y  +   
Sbjct: 61  APSASGQDQSAVPGGSAAKPTSKAAQTITVKTDVLALKISLQGGVIDEADLLKYPQEQDK 120

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP---TTPIKLVF 160
             P V LL+ SN    Y A+   +         +            LTP      I L +
Sbjct: 121 ADP-VRLLTDSNG-FVYVAQSGLIGEKGAPAPDHYAQYTAPQMEYTLTPGENELRIPLTW 178

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
           +     + +  I     Y  ++   + N S      S   ++ R      T       G 
Sbjct: 179 EKDGIKITKLIIIKRGDYTVQVEYKIDNTSQSPWAASQYRQLTRLGTTPGTQLVHTYTGT 238

Query: 221 I------AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH-- 272
           +            +  +  + ++ K+ +S    S+ W+ I   Y+ S ++PS     +  
Sbjct: 239 VYAGDVPGTKDRLAYEKIPFEEMLKTKLSK-DLSSGWVAIIQHYFMSAWVPSDRQQVNHF 297

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
                  +    Y    S+   TI  G S   ++ L+ G K    +    +        +
Sbjct: 298 YTLVSDKNNQTLYTIGMSSPVTTIPAGGSGELSSTLYVGPKIQANLAPLAQ-----GLNL 352

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
            ID+G F  IA P+F L+ +F+  VGN+G +I+L T+ +KL F   +   Y S A M+ +
Sbjct: 353 TIDFGIFTVIADPIFWLLKHFHEWVGNWGWSIVLVTLVIKLFFLWPSAISYRSMAKMRAV 412

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
            PK+  L+EKF     Q L + M++LY+   INPL GC PI++QIPVF ++Y V++ S+E
Sbjct: 413 TPKMKALKEKF-GEDRQKLSQEMMKLYQREKINPLGGCLPIVIQIPVFISLYWVLAESVE 471

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           +R AP+  WI DL+  DP                     + P++M +SMFIQ K++P P 
Sbjct: 472 LRQAPWILWIHDLSQKDPYF-------------------VLPLLMGISMFIQQKLNPAPV 512

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
           D  Q  I  W+PV+F    S FPAGL++YW  +N++SI QQ +I +    ++ LI 
Sbjct: 513 DPMQQKIFAWLPVIFTIFFSFFPAGLVLYWFVNNLLSIAQQYMITRKIEKQMALIK 568


>gi|197333980|ref|YP_002154775.1| inner membrane protein OxaA [Vibrio fischeri MJ11]
 gi|197315470|gb|ACH64917.1| inner membrane protein OxaA [Vibrio fischeri MJ11]
          Length = 541

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 138/571 (24%), Positives = 240/571 (42%), Gaps = 43/571 (7%)

Query: 1   MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N   +A+AL S ++   WQ      +   ++  ++       P     + +    
Sbjct: 1   MDTQRNILLLALALVSFLLFQQWQVETNPQQPATVSTVQQTQTDGDVP-----TSSTANS 55

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           D  A +      + +    L   ++  G    +  L  Y  ++ S +  V L   ++  +
Sbjct: 56  DTPADSAQSDKLITITTDVLTLKVDTLGGDIIESVLNKYDAELDSKAKFVLL--KNDATH 113

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVFKNANNILFERTISLD 175
           +Y A+   +                  +            + L          +  I   
Sbjct: 114 SYVAQSGLIGPQGIDSNSGRAQFTAQKTDYVLAEGQNELRVPLTLVKDGITYTKTLILKR 173

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKY 234
           + Y   +  TV N S           + ++      + T     G      D    +  +
Sbjct: 174 DSYAIDVDYTVDNQSSAPATVEMYTNLKQNLMDDGGSLTMPTYRGAAYSTEDTRYKKYSF 233

Query: 235 SDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
            D+E  ++S    +   W G+   Y+AS +IP          +   D             
Sbjct: 234 DDMEDKNLSIDMTNGQGWAGMLQHYFASAWIPRNVNDAKLTSRVAGD---YGYIGVRMPS 290

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
           +TI  G+  T +  L+ G K    +         P  ++ +D+GW +FIA P+  L+S+ 
Sbjct: 291 VTIPAGQEATLSATLWTGPKLQKEMAATA-----PYLDLTVDYGWLWFIASPLHKLLSFI 345

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
             +V N+G+AI++ T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + +
Sbjct: 346 QGIVVNWGLAIIVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGD-DRQRMSQ 404

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            M++LYK   +NPL GC PILLQ+P+F ++Y  +  S+E+RH PF+GWI DL+A DP   
Sbjct: 405 EMMELYKKEKVNPLGGCLPILLQMPIFISLYWALMESVELRHTPFFGWITDLSAQDPYY- 463

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532
                             I P++M  SMF+  KMSP    D  Q  I+ +MPV+F     
Sbjct: 464 ------------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTVFFL 505

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            FP+GL++YW  SN+++++QQ +I +    +
Sbjct: 506 WFPSGLVLYWLVSNIVTLIQQTLIYRALEKK 536


>gi|145301204|ref|YP_001144045.1| 60 kDa inner membrane protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166975848|sp|A4STS5|OXAA_AERS4 RecName: Full=Inner membrane protein oxaA
 gi|142853976|gb|ABO92297.1| 60 kDa inner membrane protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 548

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 136/573 (23%), Positives = 240/573 (41%), Gaps = 41/573 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +                QT     +   +     + +
Sbjct: 1   MESQRNLIL-IGLLFVSFLLWQQW--ESDKAPKPAPTTVAQTEHFVPEAGQTGDIPQVSE 57

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           +A A +    + + +  L  +++ +G       L  + L+   +   V L   S     Y
Sbjct: 58  QANANAARKLITVSSDVLKLTLDTQGGDIVSAELLAHKLEEGKDQSFVLL--TSQPDRLY 115

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175
            A+   V              +                 + + + ++  ++F +   L  
Sbjct: 116 VAQSGLVGRDGPDSQAQGRPTYEAAQTSYQLADGQDQVVVPMTWTDSKGVVFTKEFVLKR 175

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             Y   +   + N S + ++    G++ +                    G  S  E +Y 
Sbjct: 176 GDYAIGVDYKIDNKSAEPVQVQFYGQLKQTVTTPKDQEGHAMVASAYRGGAFSSEESRYK 235

Query: 236 DIEKSSISNFHESN----SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
                 + +   +      W+ +   Y+ S + P+ +   +S +  +  G  +    + A
Sbjct: 236 KYTFDEMKDADLNKTTKGGWVAMLQHYFVSAWAPNAD-DTNSFYSRVIPGKDQAIIGYKA 294

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
             + +  G+    T+ L+ G K    +            ++ +D+GW +FIA+P+  L++
Sbjct: 295 PLVDVAAGQQAEVTSKLWVGPKLQDQMAKVAN-----HLDLTVDYGWLWFIAQPLHWLLT 349

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
            F   V N+G+AI++ T+ V+ + FPL K QY S A M+ +QPK+  L+E+F     Q +
Sbjct: 350 VFQGFVHNWGVAIIMLTLLVRGIMFPLTKAQYTSMAKMRMLQPKLAALKERFSD-DRQKM 408

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
            + M++LYK   +NPL GC PIL+Q+P+F A+Y  +  S+E+RHAPF  WI DL+  DP 
Sbjct: 409 SQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWALMESVELRHAPFALWITDLSVKDPF 468

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530
                               + PI+M  SM+   KMSP    D  Q  ++ +MP++F F 
Sbjct: 469 F-------------------VLPILMGASMWYLQKMSPTTITDPMQQKVMQFMPIIFTFM 509

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
              FPAGL +YW  SNVISI QQ +I +    +
Sbjct: 510 FLWFPAGLTLYWLVSNVISITQQTIIYRQLEKK 542


>gi|329114454|ref|ZP_08243216.1| Inner membrane protein OxaA [Acetobacter pomorum DM001]
 gi|326696530|gb|EGE48209.1| Inner membrane protein OxaA [Acetobacter pomorum DM001]
          Length = 594

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 172/581 (29%), Positives = 302/581 (51%), Gaps = 18/581 (3%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    +A  LS ++++ +  F+   ++     +  +      P     +  A      
Sbjct: 12  MDSKRLILATLLSALVLFGYDYFFPQHQLVPPAQQGVHAVAPPAPASSGAAAPAENTQAE 71

Query: 62  AQAL---SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           A A        RV +  P++ G++NL+GA+ DDL L+ Y   V  +SP V +L+ ++T  
Sbjct: 72  AAAPVKDGPETRVAINAPAVQGTLNLRGARLDDLVLKHYRETVKPDSPDVRVLNSASTHA 131

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            Y        +  ++ LP++NT+W   SG  +    P+ L + N   + F+  +S+D++Y
Sbjct: 132 DYVDFGWRAPSDVSVRLPDANTLWK-ASGTQMDAEHPLTLSWDNGQGLTFDIRLSVDQNY 190

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI----AVLGDKSLVEQKY 234
           +F I   V N++   +   P  R+ R      T    V EG I      L + S    + 
Sbjct: 191 MFTISQQVHNSTGQAVALYPFYRVNRGYTPEETGGMLVHEGPISVIDGRLNEGSYKTVRT 250

Query: 235 SDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
             +   +I+  H+ +  W GI+DKYW    +P +  +    + + +   A      +   
Sbjct: 251 GGVPPDNIAWSHQGTGGWAGITDKYWLMAVLPDQNANVIGTYGFQAAQGAYQVGFTATAP 310

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
           + +  G++ +T   +FAGAKE   +  YEKDL +P F   +D+GW  F+ +P+F ++ + 
Sbjct: 311 VQVAAGQTASTEAHVFAGAKEVRLLEQYEKDLHVPMFWKAVDFGWLSFLTRPVFFVLDWL 370

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
              +G+FG+A++  TV VK+ F PL  KQ   T     ++P++D +R + K   P  +Q+
Sbjct: 371 NEHLGSFGLALLTFTVIVKVAFLPLTIKQMRMTWKTARLKPQVDLIRSRLKD-DPMAMQQ 429

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            ++ LY+  N+N   G  P+L+Q PVF+ +YK + +++EMRHAPF GW+KDL+A DPTN+
Sbjct: 430 QIMALYRQENVNLFGGFLPLLIQAPVFWCLYKDLYVTIEMRHAPFVGWVKDLSAPDPTNL 489

Query: 474 FTLFGILPFYL---PGFMHVGIWPIIMSLSMFIQMKM--SPPPADKGQAMILNWMPVVFV 528
           F LFG++PF       F+ +G WPI+   ++F+  K+  S    D  Q  ++ ++P++F 
Sbjct: 490 FNLFGLIPFDPTHITPFLALGAWPIMYGATLFLMQKVSSSSANMDPSQQKVMMFIPLLFT 549

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG---AEIGL 566
           F ++  P GL+IY+ WSN+++ VQQ VI+       A+  L
Sbjct: 550 FFMARQPVGLVIYYCWSNILTAVQQVVIISRLKAADAKPQL 590


>gi|254490319|ref|ZP_05103508.1| 60Kd inner membrane protein [Methylophaga thiooxidans DMS010]
 gi|224464452|gb|EEF80712.1| 60Kd inner membrane protein [Methylophaga thiooxydans DMS010]
          Length = 546

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 145/572 (25%), Positives = 246/572 (43%), Gaps = 37/572 (6%)

Query: 1   MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ-------VDN 51
           M+    +F+   + +S+++  AWQN YV P+       +    T + P           +
Sbjct: 1   MDNLRTFFIFGLLIVSLLLWEAWQNDYVRPQQAADVASQTQTTTPQAPVSDELPDMPSAS 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
           + +   +    Q  + S +V +K   +   I  +G    DL L  Y +        V  L
Sbjct: 61  AESLPDVPQSQQVSASSGKVHVKTDVMDLHIATQGGDIRDLALLEYAVSSEQPDTPVQFL 120

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           + S  +                   +          +       I L +++ + +   +T
Sbjct: 121 NDSAGQFFVTQSGLRADGDAPTHYEHYQAEQTEYVLQAGQDELKIPLYWQSESGLQVVKT 180

Query: 172 ISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230
            +   + Y+  +   V NNS +     P  ++ R++    +       G +         
Sbjct: 181 YNFKRDSYVVNVDYQVINNSGETFSAYPYAQLNRNRSDDDSMFIYTYTGAVFSSKGNEYE 240

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
           +  + D++  + S       W  +   Y+ +  IP + +     F   S     Y A   
Sbjct: 241 KVDFDDLDDKAFSRSSID-GWAAMIQHYFVAAIIPPQASE-QLGFYGKSINGTNYTAGVR 298

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
              I+   G+   T   L+ G K+   +    ++       + +D+G    I++P+F +M
Sbjct: 299 MPAISASSGEQAATQYQLYLGPKKHERLDKVAEN-----LPLTVDYGILTIISEPLFWIM 353

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
            + + L GN+G +I+L TV +KL FF L+   Y S A M+ + PK+  L+E++     Q 
Sbjct: 354 EWLHKLTGNWGWSIILLTVLIKLAFFKLSATSYRSMAAMRKLTPKLATLKERYGDDK-QK 412

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
             +AM+ LY+T  INPL GC PIL+Q+PVF A Y V+  S+E+R A F  WI DL A DP
Sbjct: 413 FNQAMMDLYRTEKINPLGGCLPILVQMPVFLAFYWVLVESIELRQADFMLWINDLTAMDP 472

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I P++  LSM+ Q K++P P D  QAM++   P+VF   
Sbjct: 473 YF-------------------ILPVLFGLSMWFQQKLNPAPQDPAQAMMMKIFPLVFTVF 513

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            + FPAGL++YW  +NV+SI QQ  I +  GA
Sbjct: 514 FAFFPAGLVLYWVVNNVLSIAQQWYITRKMGA 545


>gi|258622952|ref|ZP_05717967.1| inner membrane protein, 60 kDa [Vibrio mimicus VM573]
 gi|258584735|gb|EEW09469.1| inner membrane protein, 60 kDa [Vibrio mimicus VM573]
          Length = 541

 Score =  358 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 141/570 (24%), Positives = 247/570 (43%), Gaps = 41/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         ++             +        +
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A + +  + + +  L  SI+  G       L  Y  ++ S+   V L +     + +
Sbjct: 60  ---AAAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYSEELDSSESFVLLQNTQG--HQF 114

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V         N+   + + +             I + ++       +  I    
Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVSADSFSLAEGQDELRIPMTYQANGIDYTKTFILKRG 174

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +V  V NNS +         + ++   +  N       G      D    +  + 
Sbjct: 175 SYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234

Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S     + +W+ +   Y+AS +IP  E       + +++              
Sbjct: 235 DMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+  L+S+  
Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAAVA-----PNLDLVVDYGWLWFIAKPLHWLLSFIQ 346

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 347 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536


>gi|117617478|ref|YP_858698.1| membrane protein OxaA [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|166975847|sp|A0KQZ7|OXAA_AERHH RecName: Full=Inner membrane protein oxaA
 gi|117558885|gb|ABK35833.1| membrane protein OxaA [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 548

 Score =  358 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 137/573 (23%), Positives = 245/573 (42%), Gaps = 41/573 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +                QT     +   +     + +
Sbjct: 1   MESQRNLIL-IGLLFVSFLLWQQW--ESDKAPKPAPTTVAQTEHFVPEAGQTGDIPQVSE 57

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           +A A +    + + +  L  +++ +G      +L  + L+   + P V L   S  ++ Y
Sbjct: 58  QANANTARKLITVSSDVLKLTLDTQGGDIVSADLLAHKLEEGKDQPFVLL--TSQPEHLY 115

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175
            A+   V              +                 + + + ++  ++F +   L  
Sbjct: 116 VAQSGLVGRNGPDSQAQGRPTYEAAQTSYQLADGQDQVVVPMTWTDSKGVVFTKEFVLKR 175

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             Y   +   + N S + ++    G++ +                    G  S  + +Y 
Sbjct: 176 GDYAVGVDYKIDNKSAEPVQVQFYGQLKQTVTTPKDQQGHAMVASAYRGGAFSSEDTRYK 235

Query: 236 DIEKSSISNFHESN----SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
                 + +   +      W+ +   Y+ S + P+ +   +S +  +  G  +    + A
Sbjct: 236 KYTFDEMKDADLNKTTKGGWVAMLQHYFVSAWAPNAD-DTNSFYSRVIPGKDQAIIGYKA 294

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
             + +  G+    T+ L+ G K    +            ++ +D+GW +FIA+P+  L++
Sbjct: 295 PLVDVAAGQQAEVTSKLWVGPKLQDQMAKVAN-----HLDLTVDYGWLWFIAQPLHWLLT 349

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
            F+  V N+G+AI++ T+ V+ + FPL K QY S A M+ +QPK+  LRE+F     Q +
Sbjct: 350 VFHGFVQNWGVAIIMLTLLVRGIMFPLTKAQYTSMAKMRMLQPKLAALRERFGD-DRQKM 408

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
            + M++LYK   +NPL GC PIL+Q+P+F A+Y  +  S+E+RHAPF  WI DL+  DP 
Sbjct: 409 SQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWALMESVELRHAPFALWITDLSVKDPF 468

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530
                               + PI+M  SM+   KMSP    D  Q  ++ +MP++F F 
Sbjct: 469 F-------------------VLPILMGASMWYLQKMSPTTITDPMQQKVMQFMPIIFTFM 509

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
              FPAGL +YW  SNVISI QQ +I +    +
Sbjct: 510 FLWFPAGLTLYWLVSNVISITQQTIIYRQLEKK 542


>gi|145640676|ref|ZP_01796259.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae R3021]
 gi|145274602|gb|EDK14465.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae 22.4-21]
          Length = 541

 Score =  358 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 142/567 (25%), Positives = 255/567 (44%), Gaps = 38/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  +I           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  ++ S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+  +    + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A    ++  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETNYKKYSFAD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +    +TI 
Sbjct: 234 MQDNNLSIGTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 SGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+MP+VF+F    FP+
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+I QQ +I +    +
Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|77461960|ref|YP_351467.1| putative inner membrane protein translocase component YidC
           [Pseudomonas fluorescens Pf0-1]
 gi|123602665|sp|Q3K428|OXAA_PSEPF RecName: Full=Inner membrane protein oxaA
 gi|77385963|gb|ABA77476.1| putative inner membrane protein [Pseudomonas fluorescens Pf0-1]
          Length = 560

 Score =  358 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 149/583 (25%), Positives = 245/583 (42%), Gaps = 51/583 (8%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL   S ++V  W   Y    +   N       +        N+ AA  
Sbjct: 1   MDI-KRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVASSTTTSGLPDTATGNNAAASD 59

Query: 58  IDDRAQALSMSP----------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
              RA + + +P           +++K   L  SI+ +G     L L  Y          
Sbjct: 60  DIPRAASDTSAPAETPVAASKDLIQIKTDVLDLSIDPQGGDVAQLTLPLYPRRQDRPDVP 119

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNA 163
             L   +  +  Y A+   + T      P    +++             KL     F   
Sbjct: 120 FQLF-DNGGERTYLAQSGLIGTNGPDANPAGRPIYSSEKKTYQLADGQDKLVVDLKFSKD 178

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEG 219
                +R       Y   +   + N S      S   ++ R                  G
Sbjct: 179 GVNYIKRFTLKRGLYDVTVTYLIDNQSAQPWSGSMFAQLKRDASADPSSTTATGTATYLG 238

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                  +   +    D++K+ +     +  W+     Y+ + ++  K  +   Q +  S
Sbjct: 239 AALWTSSEPYKKVSMKDMDKAQLKET-VTGGWVAWLQHYFVTAWVAPKGENNIVQTRKDS 297

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
            G   Y   ++   +T  PG  + T+  L+AG K    +         P  E+ +D+G  
Sbjct: 298 KG--NYIIGYTGPSLTAAPGAKVETSAVLYAGPKSQAVLKELS-----PGLELTVDYGIL 350

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +FIA+P+F L+ + +++VGN+G +I+  T+ +K +FFPL+   Y S A M+ + PK+  L
Sbjct: 351 WFIAQPIFWLLQHIHSIVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAAL 410

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR APF 
Sbjct: 411 KEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFM 469

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            WI DL+  DP                     I PIIM  +MFIQ +++P P D  QA +
Sbjct: 470 LWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAKV 510

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           +  MP++F F    FPAGL++YW  +N +SI QQ  I +   A
Sbjct: 511 MKMMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKIEA 553


>gi|16272937|ref|NP_439163.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae Rd KW20]
 gi|260580091|ref|ZP_05847921.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus
           influenzae RdAW]
 gi|1168226|sp|P44973|OXAA_HAEIN RecName: Full=Inner membrane protein oxaA
 gi|1574032|gb|AAC22663.1| inner membrane protein, 60 kDa (yidC) [Haemophilus influenzae Rd
           KW20]
 gi|260093375|gb|EEW77308.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus
           influenzae RdAW]
          Length = 541

 Score =  358 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 142/567 (25%), Positives = 256/567 (45%), Gaps = 38/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  +I           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  ++ S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+  +    + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A    ++  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETNYKKYSFSD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +  + +TI 
Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGSVVTIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+MP+VF+F    FP+
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+I QQ +I +    +
Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|59710610|ref|YP_203386.1| putative inner membrane protein translocase component YidC [Vibrio
           fischeri ES114]
 gi|59478711|gb|AAW84498.1| cytoplasmic insertase into membrane protein, Sec system [Vibrio
           fischeri ES114]
          Length = 541

 Score =  358 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 138/571 (24%), Positives = 240/571 (42%), Gaps = 43/571 (7%)

Query: 1   MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N   +A+AL S ++   WQ      +   ++  ++       P     + +    
Sbjct: 1   MDTQRNILLLALALVSFLLFQQWQVETNPQQPATVSTVQQTQTDGDVP-----TSSTANS 55

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           D  A +      + +    L   ++  G    +  L  Y  ++ S +  V L   ++  +
Sbjct: 56  DTPADSAQSDKLITITTDVLTLKVDTLGGDIIESVLNKYDAELGSKAKFVLL--KNDATH 113

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVFKNANNILFERTISLD 175
           +Y A+   +                  +            + L          +  I   
Sbjct: 114 SYVAQSGLIGPQGIDSNSGRAQFTAQKTDYVLAEGQNELRVPLTLVKDGITYTKTLILKR 173

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKY 234
           + Y   +  TV N S           + ++      + T     G      D    +  +
Sbjct: 174 DSYAIDVDYTVDNQSSAPATVEMYTNLKQNLMDDGGSLTMPTYRGAAYSTEDTRYKKYSF 233

Query: 235 SDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
            D+E  ++S    +   W G+   Y+AS +IP          +   D             
Sbjct: 234 DDMEDKNLSIDMTNGQGWAGMLQHYFASAWIPRNVNDAKLTSRVAGD---YGYIGVRMPS 290

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
           +TI  G+  T +  L+ G K    +         P  ++ +D+GW +FIA P+  L+S+ 
Sbjct: 291 VTIPAGQEATLSATLWTGPKLQKEMAATA-----PYLDLTVDYGWLWFIASPLHKLLSFI 345

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
             +V N+G+AI++ T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + +
Sbjct: 346 QGIVVNWGLAIIVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGD-DRQRMSQ 404

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            M++LYK   +NPL GC PILLQ+P+F ++Y  +  S+E+RH PF+GWI DL+A DP   
Sbjct: 405 EMMELYKKEKVNPLGGCLPILLQMPIFISLYWALMESVELRHTPFFGWITDLSAQDPYY- 463

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532
                             I P++M  SMF+  KMSP    D  Q  I+ +MPV+F     
Sbjct: 464 ------------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTVFFL 505

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            FP+GL++YW  SN+++++QQ +I +    +
Sbjct: 506 WFPSGLVLYWLVSNIVTLIQQTLIYRALEKK 536


>gi|309973500|gb|ADO96701.1| Inner membrane translocation protein YidC [Haemophilus influenzae
           R2846]
          Length = 541

 Score =  358 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 142/567 (25%), Positives = 254/567 (44%), Gaps = 38/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  +I           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  ++ S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+  +    + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A     +  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSDTNYKKYSFAD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +    +TI 
Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 SGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+MP+VF+F    FP+
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+I QQ +I +    +
Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|313202488|ref|YP_004041146.1| 60 kda inner membrane insertion protein [Methylovorus sp. MP688]
 gi|312441804|gb|ADQ85910.1| 60 kDa inner membrane insertion protein [Methylovorus sp. MP688]
          Length = 549

 Score =  358 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 147/573 (25%), Positives = 251/573 (43%), Gaps = 34/573 (5%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYV--YPRIEEMNNERKNIQTVKQPNQVDNSYAAV-LI 58
                  + +  S  I+  W  +     P  E +  E     +V    ++  + AA  + 
Sbjct: 1   MDTKRLILFVIFSFSILMLWDAWQREHTPPPETVTAEAATDNSVPHAEKLPGAKAAADMP 60

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
            +    L  + R++++       I+  G     L L  +  D S+    V LL       
Sbjct: 61  KESGFRLQTADRIQVETDVYKAVIDTTGGDLRRLELLKHRADNSTTENFV-LLDDRAAPM 119

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EH 177
            Y A+   +               +       + T  ++L   +A+ +  ++  +   + 
Sbjct: 120 VYVAQSGLIGQGLPNHKTVFTAEASNYQLAAGSDTLEVRLTAASADGVKVDKIYTFHRDS 179

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           Y+  +   + N S   I  +   +++   +    ++      G           +  + D
Sbjct: 180 YVINLRYEIHNESASPIDPTVYYQVVHDTESNQGSHMMPTFTGGAYFTQADKFKKLSFKD 239

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
           + K+ +S    S+ W+G+   Y+ S +IP +      QF         Y     ++   I
Sbjct: 240 MGKNDLSKT-TSDGWVGLLQHYFVSAWIPKEG--VTRQFYSKKLADNIYSIGTKSDIGVI 296

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
            PG S       +AG +    +         P  E  +D+GW   IA P+F ++S   ++
Sbjct: 297 APGASAEVEARYYAGPQNQEVMKQVA-----PGLEYTVDYGWLTIIASPLFWILSKIESV 351

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           V N+G+AI+L TV +KL F+PL+   Y S A+M+ + P++  L+E++     Q +Q AM+
Sbjct: 352 VHNWGVAIILLTVMIKLAFYPLSAASYRSMAHMRELAPRLQRLKEQYGD-DRQKMQVAMM 410

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LYKT  INP+ GC PIL+QIPVF ++Y V+  S+EMRHAPF  WI DL+A DP      
Sbjct: 411 ELYKTEKINPMGGCLPILVQIPVFISLYWVLLGSVEMRHAPFMLWIHDLSAIDPYY---- 466

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536
                          + PI+M  +M IQ +++P P D  QA ++  MP+VF      FPA
Sbjct: 467 ---------------VLPILMGATMIIQTRLNPTPTDPVQAKVMMIMPIVFSVFFFFFPA 511

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           GL++YW  +NV+SI QQ  I +       L  +
Sbjct: 512 GLVLYWLVNNVLSIAQQWHINRSTERATALKKK 544


>gi|68249585|ref|YP_248697.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae 86-028NP]
 gi|229843940|ref|ZP_04464081.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae 6P18H1]
 gi|81335986|sp|Q4QLR0|OXAA_HAEI8 RecName: Full=Inner membrane protein oxaA
 gi|68057784|gb|AAX88037.1| preprotein translocase subunit YidC [Haemophilus influenzae
           86-028NP]
 gi|229812934|gb|EEP48622.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae 6P18H1]
          Length = 541

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 142/567 (25%), Positives = 255/567 (44%), Gaps = 38/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  +I           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  ++ S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+  +    + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A    ++  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETNYKKYSFAD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +    +TI 
Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+MP+VF+F    FP+
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+I QQ +I +    +
Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|319897488|ref|YP_004135685.1| inner membrane protein oxaa [Haemophilus influenzae F3031]
 gi|317432994|emb|CBY81365.1| Inner membrane protein oxaA [Haemophilus influenzae F3031]
          Length = 541

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 142/567 (25%), Positives = 256/567 (45%), Gaps = 38/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  +I           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  +++S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELNSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+  +    + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQVEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A    ++  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETNYKKYSFSD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +    +TI 
Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+MP+VF+F    FP+
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+I QQ +I +    +
Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|261213269|ref|ZP_05927551.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC341]
 gi|260837543|gb|EEX64246.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC341]
          Length = 541

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 141/570 (24%), Positives = 244/570 (42%), Gaps = 41/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         ++             +        +
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAADAPSFSDELDPTPAQN 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A + +  + + +  L  SI+  G       L  Y  ++ S    V L +     + +
Sbjct: 60  ---AAAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYAEELDSAESFVLLQNTQG--HQF 114

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V         N+   + + +             I + ++       +  I    
Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVNAESFTLAEGQDELRIPMTYQANGIDYTKTFILKRG 174

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +V  V NNS +         + ++   +  N       G      D    +  + 
Sbjct: 175 SYAVDVVFDVANNSGNPATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234

Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S     + +W  +   Y+AS +IP  E       + +S+              
Sbjct: 235 DMKDRNLSAPNDVTVNWAAMIQHYFASAWIPRNEPQAQLYSRVISNLGD---IGIRTPNK 291

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+  L+S   
Sbjct: 292 TIANGDKAEFEATLWVGPKLQDKMAAVA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQ 346

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 347 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PI+LQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 406 MMELYKKEKVNPLGGCLPIVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLW 506

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536


>gi|229846058|ref|ZP_04466170.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae 7P49H1]
 gi|229811062|gb|EEP46779.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae 7P49H1]
          Length = 541

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 142/567 (25%), Positives = 254/567 (44%), Gaps = 38/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  +I           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  ++ S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+  +    + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A     +  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSDTNYKKYSFAD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +    +TI 
Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+MP+VF+F    FP+
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+I QQ +I +    +
Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|329123023|ref|ZP_08251594.1| YidC/Oxa1 family membrane protein insertase [Haemophilus aegyptius
           ATCC 11116]
 gi|327471954|gb|EGF17394.1| YidC/Oxa1 family membrane protein insertase [Haemophilus aegyptius
           ATCC 11116]
          Length = 541

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 143/567 (25%), Positives = 255/567 (44%), Gaps = 38/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  +I           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  +++S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELNSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+  +    + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     + + N         A    ++  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVENSGNVAMPTYTGGAYSSSETNYKKYSFSD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +    +TI 
Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 AGSQETITSSLWIGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+MP+VF+F    FPA
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPA 507

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+I QQ +I +    +
Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|145634176|ref|ZP_01789887.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae PittAA]
 gi|148826353|ref|YP_001291106.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae PittEE]
 gi|166975868|sp|A5UD72|OXAA_HAEIE RecName: Full=Inner membrane protein oxaA
 gi|145268620|gb|EDK08613.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae PittAA]
 gi|148716513|gb|ABQ98723.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae PittEE]
          Length = 541

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 140/567 (24%), Positives = 254/567 (44%), Gaps = 38/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  +I           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  ++ S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+  +    + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A    ++  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETNYKKYSFAD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +    +TI 
Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+MP++F+     FP+
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIFMVFFLWFPS 507

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+I QQ +I +    +
Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|145637306|ref|ZP_01792967.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae PittHH]
 gi|145269558|gb|EDK09500.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae PittHH]
          Length = 541

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 142/567 (25%), Positives = 253/567 (44%), Gaps = 38/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  +I           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  ++ S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+  +    + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     + + N         A     +  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVENSGNVAMPTYTGGAYSSSDTNYKKYSFAD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +    +TI 
Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 SGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+MP+VF+F    FP+
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+I QQ +I +    +
Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|254000529|ref|YP_003052592.1| 60 kDa inner membrane insertion protein [Methylovorus sp. SIP3-4]
 gi|253987208|gb|ACT52065.1| 60 kDa inner membrane insertion protein [Methylovorus sp. SIP3-4]
          Length = 549

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 147/573 (25%), Positives = 251/573 (43%), Gaps = 34/573 (5%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYV--YPRIEEMNNERKNIQTVKQPNQVDNSYAAV-LI 58
                  + +  S  I+  W  +     P  E +  E     +V    ++  + AA  + 
Sbjct: 1   MDTKRLILFVIFSFSILMLWDAWQREHTPPPETVTAEAATDNSVPHAEKLPGAKAAADMP 60

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
            +    L  + R++++       I+  G     L L  +  D S+    V LL       
Sbjct: 61  KESGFRLQTADRIQVETDVYKAVIDTTGGDLRRLELLKHRADNSTTENFV-LLDDRAAPM 119

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EH 177
            Y A+   +               +       + T  ++L   +A+ +  ++  +   + 
Sbjct: 120 VYVAQSGLIGQGLPNHKTVFTAEASNYQLAAGSDTLEVRLTAASADGVKVDKIYTFHRDS 179

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           Y+  +   + N S   I  +   +++   +    ++      G           +  + D
Sbjct: 180 YVINLRYEIHNESASPIDPTVYYQVVHDTESNQGSHMMPTFTGGAYFTQADKFKKLSFKD 239

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
           + K+ +S    S+ W+G+   Y+ S +IP +      QF         Y     ++   I
Sbjct: 240 MGKNDLSKT-TSDGWVGLLQHYFVSAWIPKEG--VTRQFYSKKLADNIYSIGTKSDIGVI 296

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
            PG S       +AG +    +         P  E  +D+GW   IA P+F ++S   ++
Sbjct: 297 APGASAEVDARYYAGPQNQEVMKQVA-----PGLEYTVDYGWLTIIASPLFWILSKIESV 351

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           V N+G+AI+L TV +KL F+PL+   Y S A+M+ + P++  L+E++     Q +Q AM+
Sbjct: 352 VHNWGVAIILLTVMIKLAFYPLSAASYRSMAHMRELAPRLQRLKEQYGD-DRQKMQVAMM 410

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LYKT  INP+ GC PIL+QIPVF ++Y V+  S+EMRHAPF  WI DL+A DP      
Sbjct: 411 ELYKTEKINPMGGCLPILVQIPVFISLYWVLLGSVEMRHAPFMLWIHDLSAIDPYY---- 466

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536
                          + PI+M  +M IQ +++P P D  QA ++  MP+VF      FPA
Sbjct: 467 ---------------VLPILMGATMIIQTRLNPTPTDPVQAKVMMIMPIVFSVFFFFFPA 511

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           GL++YW  +NV+SI QQ  I +       L  +
Sbjct: 512 GLVLYWLVNNVLSIAQQWHINRSTERATALKKK 544


>gi|219871547|ref|YP_002475922.1| putative inner membrane protein translocase component YidC
           [Haemophilus parasuis SH0165]
 gi|254772790|sp|B8F6M2|OXAA_HAEPS RecName: Full=Inner membrane protein oxaA
 gi|219691751|gb|ACL32974.1| putative inner membrane protein translocase component YidC
           [Haemophilus parasuis SH0165]
          Length = 546

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 148/569 (26%), Positives = 257/569 (45%), Gaps = 37/569 (6%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M  N +  +   + +S +I   WQ  Y  P I+         QT +  NQ  +  A+   
Sbjct: 1   MNSNRSLLIMGLLLVSFLIFTQWQQDYN-PEIQAQKQAMAQAQTQQVANQSSDVPASSNA 59

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
               +  +    + ++   L  +++  G    D +L  Y+ ++ SN+P   L    N K 
Sbjct: 60  ASINEQSTKGKTITIETDVLRLTVDTLGGDVVDSDLLKYNAELDSNTPFELL--QDNGKV 117

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTISLD 175
            Y A+   V                      L          L F+    +  +      
Sbjct: 118 LYVAQSGLVGKNGIDTTAGRAQYQATAEKFALAEGQDEIALPLTFEKDGVVYTKTFTLKR 177

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             Y   +   + N + + +   P G++     ++  N         A    +   ++   
Sbjct: 178 GSYNVAVNYHIKNGTAETLEVQPYGQLKHTLVESTGNFAMPTYTGGAYSSSEVNYKKYSF 237

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D    +  +      W  +   Y+ S +IP+++   +   +    G+      +      
Sbjct: 238 DEMAKANLSVDTKAGWAAVLQHYFVSAWIPNQDAENNLYTRT---GNGVGTIGYRGPVTQ 294

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           + P    T T+ L+ G K+   +     +     F++ +D+GW +FIAKP+F L+++  +
Sbjct: 295 VAPNGEATITSHLWTGPKDQAAMAQVANN-----FDLTVDYGWAWFIAKPLFWLLTFIQS 349

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           +V N+G+AI+  T+ VK + +PL K QY S A M+ +QP+I E+RE+F     Q + + M
Sbjct: 350 IVSNWGLAIIGVTIVVKTILYPLTKAQYTSMAKMRMLQPRIQEMRERFGD-DRQRMSQEM 408

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NP+ GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP  IF 
Sbjct: 409 MKLYKEEKVNPMGGCLPILLQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIF- 467

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534
                             P++M  SM++  KMSP P AD  Q  ++N+MPV+F      F
Sbjct: 468 ------------------PLLMGGSMYLLQKMSPTPIADPVQQKVMNFMPVMFTVFFLWF 509

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           P+GL++YW  SN+I+I QQ +I +    +
Sbjct: 510 PSGLVLYWLTSNLITIAQQWLIYRNLEKK 538


>gi|269103816|ref|ZP_06156513.1| OxaI/YidC membrane insertion protein [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163714|gb|EEZ42210.1| OxaI/YidC membrane insertion protein [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 540

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 138/568 (24%), Positives = 244/568 (42%), Gaps = 39/568 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    +Q +      +  +                ++   ++   
Sbjct: 1   MDSQRN-ILLIALLFVSFLLFQQWNSDKNPQPQSQGVAQQVNNSGDVPSHSADGQLVT-- 57

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                S    + +K   L  +++  G    D  L  Y+  + S  P V L   +N +++Y
Sbjct: 58  --DQSSSQNLITIKTDVLALTVDTLGGDVVDAKLLKYNNTLGSKDPFVLL--ENNPEHSY 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176
            A+   +     I+       + +            +L     ++       +  +    
Sbjct: 114 VAQSGLIGQNG-IDTNAGRAQFTVSGKDFTLAPDQKELRVPMTYEKDGIKYTKTFVLKPN 172

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            Y   +  T+ N S          ++      + ++         A     +  ++   D
Sbjct: 173 SYAVNVDYTIDNQSAAPTSVQMYAQLRHSLVASKSSLTMPTYQGGAYSSVDTNYKKYSFD 232

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
             K    N    + W+ +   Y+ S +IP       +   Y                +T+
Sbjct: 233 DMKDKNLNVTTPDGWVAVLQHYFVSAWIPRDGNESLNNL-YSRSSDGNGYIGVRMPAVTV 291

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
            PG + T    L+ G K    +    K+       + +D+GW +FIA P+  L+S+ +++
Sbjct: 292 APGATDTLKATLWVGPKLQNEMAATAKN-----LNLTVDYGWLWFIASPLHKLLSFIHSI 346

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           VGN+G+AIM+ T  V+   +PL K QY S A M+ +QPK+  +RE+F     Q L + M+
Sbjct: 347 VGNWGVAIMVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERFGD-DRQRLSQEMM 405

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LY+   +NPL GC PIL+Q+P+F A+Y  +  S+E+RHAPF+GWI DL+A DP      
Sbjct: 406 ELYRKEKVNPLGGCLPILVQMPIFIALYWALMESVELRHAPFFGWIHDLSAQDPYY---- 461

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535
                          I PI+M ++MF+  KMSP    D  Q  I+ +MPV+F F    FP
Sbjct: 462 ---------------ILPILMGITMFMIQKMSPSTITDPMQQKIMTFMPVMFTFFFLWFP 506

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           +GL++YW  SN+++++QQ +I +    +
Sbjct: 507 SGLVLYWLVSNIVTLIQQTLIYRSLEKK 534


>gi|145632386|ref|ZP_01788121.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae 3655]
 gi|144987293|gb|EDJ93823.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae 3655]
          Length = 541

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 139/567 (24%), Positives = 254/567 (44%), Gaps = 38/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  +I           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  ++ S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+  +    + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A    ++  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETNYKKYSFSD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +    ++I 
Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVSIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+MP++F+     FP+
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIFMVFFLWFPS 507

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+I QQ +I +    +
Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|145630098|ref|ZP_01785880.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae R3021]
 gi|144984379|gb|EDJ91802.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae R3021]
          Length = 541

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 140/567 (24%), Positives = 254/567 (44%), Gaps = 38/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  +I           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  ++ S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+  +    + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A    ++  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETNYKKYSFSD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +    +TI 
Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 SGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+MP++F+     FP+
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIFMVFFLWFPS 507

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+I QQ +I +    +
Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|319775066|ref|YP_004137554.1| Inner membrane protein oxaA [Haemophilus influenzae F3047]
 gi|317449657|emb|CBY85863.1| Inner membrane protein oxaA [Haemophilus influenzae F3047]
          Length = 541

 Score =  357 bits (915), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 141/567 (24%), Positives = 254/567 (44%), Gaps = 38/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  +I           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  ++ S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+  +    + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A    ++  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETNYKKYSFSD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +  + +TI 
Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGSVVTIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE       Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRE-CFGDDRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+MP+VF+F    FP+
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+I QQ +I +    +
Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|301169726|emb|CBW29327.1| cytoplasmic insertase into membrane protein, Sec system
           [Haemophilus influenzae 10810]
          Length = 541

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 143/567 (25%), Positives = 257/567 (45%), Gaps = 38/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  +I           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  +++S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELNSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+  +    + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A    ++  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETNYKKYSFSD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +  + +TI 
Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGSVVTIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+MP+VF+F    FPA
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPA 507

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+I QQ +I +    +
Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|153803663|ref|ZP_01958249.1| inner membrane protein, 60 kDa [Vibrio cholerae MZO-3]
 gi|153830819|ref|ZP_01983486.1| inner membrane protein, 60 kDa [Vibrio cholerae 623-39]
 gi|229515955|ref|ZP_04405412.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TMA 21]
 gi|254291134|ref|ZP_04961931.1| inner membrane protein, 60 kDa [Vibrio cholerae AM-19226]
 gi|297581961|ref|ZP_06943881.1| inner membrane protein [Vibrio cholerae RC385]
 gi|124120800|gb|EAY39543.1| inner membrane protein, 60 kDa [Vibrio cholerae MZO-3]
 gi|148873703|gb|EDL71838.1| inner membrane protein, 60 kDa [Vibrio cholerae 623-39]
 gi|150422979|gb|EDN14929.1| inner membrane protein, 60 kDa [Vibrio cholerae AM-19226]
 gi|229347055|gb|EEO12017.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TMA 21]
 gi|297533828|gb|EFH72669.1| inner membrane protein [Vibrio cholerae RC385]
          Length = 541

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 141/570 (24%), Positives = 244/570 (42%), Gaps = 41/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         ++             +        +
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                + +  + +    L  SI+  G       L  Y  +++S    V L +     + +
Sbjct: 60  ---VAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V         N+   + + +             I + ++       +  I    
Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRG 174

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +V  V NNS  +        + ++   +  N       G      D    +  + 
Sbjct: 175 SYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234

Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S     + +W+ +   Y+AS +IP  E       + +++              
Sbjct: 235 DMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+  L+S   
Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQ 346

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           N VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 347 NFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536


>gi|260581921|ref|ZP_05849717.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus
           influenzae NT127]
 gi|260095114|gb|EEW79006.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus
           influenzae NT127]
          Length = 541

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 141/567 (24%), Positives = 255/567 (44%), Gaps = 38/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  ++           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSMTATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  ++ S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+  +    + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A    ++  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETNYKKYSFSD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +    +TI 
Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+MP+VF+F    FP+
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+I QQ +I +    +
Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|229530208|ref|ZP_04419597.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 12129(1)]
 gi|229332341|gb|EEN97828.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 12129(1)]
          Length = 541

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 140/570 (24%), Positives = 244/570 (42%), Gaps = 41/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         ++             +        +
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                + +  + +    L  SI+  G       L  Y  +++S    V L +     + +
Sbjct: 60  ---VAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V         N+   + + +             I + ++       +  I    
Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRG 174

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +V  V NNS  +        + ++   +  N       G      D    +  + 
Sbjct: 175 SYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234

Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S     + +W+ +   Y+AS +IP  E       + +++              
Sbjct: 235 DMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+  L+S   
Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQ 346

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 347 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536


>gi|15640036|ref|NP_062588.1| putative inner membrane protein translocase component YidC [Vibrio
           cholerae O1 biovar El Tor str. N16961]
 gi|121591471|ref|ZP_01678744.1| inner membrane protein, 60 kDa [Vibrio cholerae 2740-80]
 gi|147674272|ref|YP_001218407.1| putative inner membrane protein translocase component YidC [Vibrio
           cholerae O395]
 gi|153212974|ref|ZP_01948568.1| inner membrane protein, 60 kDa [Vibrio cholerae 1587]
 gi|153821953|ref|ZP_01974620.1| inner membrane protein, 60 kDa [Vibrio cholerae B33]
 gi|227080241|ref|YP_002808792.1| putative Inner membrane protein [Vibrio cholerae M66-2]
 gi|229508291|ref|ZP_04397795.1| OxaI/YidC membrane insertion protein [Vibrio cholerae BX 330286]
 gi|229508870|ref|ZP_04398361.1| OxaI/YidC membrane insertion protein [Vibrio cholerae B33]
 gi|229606565|ref|YP_002877213.1| inner membrane protein translocase component YidC [Vibrio cholerae
           MJ-1236]
 gi|254851570|ref|ZP_05240920.1| inner membrane protein oxaA [Vibrio cholerae MO10]
 gi|255746812|ref|ZP_05420758.1| OxaI/YidC membrane insertion protein [Vibrio cholera CIRS 101]
 gi|262155892|ref|ZP_06029014.1| OxaI/YidC membrane insertion protein [Vibrio cholerae INDRE 91/1]
 gi|262167094|ref|ZP_06034809.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC27]
 gi|298501190|ref|ZP_07010989.1| inner membrane protein [Vibrio cholerae MAK 757]
 gi|38503195|sp|Q9KVY4|OXAA_VIBCH RecName: Full=Inner membrane protein oxaA
 gi|172047497|sp|A5F484|OXAA_VIBC3 RecName: Full=Inner membrane protein oxaA
 gi|254778170|sp|C3LP77|OXAA_VIBCM RecName: Full=Inner membrane protein oxaA
 gi|9654395|gb|AAF93182.1| inner membrane protein, 60 kDa [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121546673|gb|EAX56855.1| inner membrane protein, 60 kDa [Vibrio cholerae 2740-80]
 gi|124116200|gb|EAY35020.1| inner membrane protein, 60 kDa [Vibrio cholerae 1587]
 gi|126520492|gb|EAZ77715.1| inner membrane protein, 60 kDa [Vibrio cholerae B33]
 gi|146316155|gb|ABQ20694.1| inner membrane protein, 60 kDa [Vibrio cholerae O395]
 gi|227008129|gb|ACP04341.1| putative Inner membrane protein [Vibrio cholerae M66-2]
 gi|227011993|gb|ACP08203.1| putative Inner membrane protein [Vibrio cholerae O395]
 gi|229354145|gb|EEO19077.1| OxaI/YidC membrane insertion protein [Vibrio cholerae B33]
 gi|229354564|gb|EEO19486.1| OxaI/YidC membrane insertion protein [Vibrio cholerae BX 330286]
 gi|229369220|gb|ACQ59643.1| OxaI/YidC membrane insertion protein [Vibrio cholerae MJ-1236]
 gi|254847275|gb|EET25689.1| inner membrane protein oxaA [Vibrio cholerae MO10]
 gi|255735569|gb|EET90968.1| OxaI/YidC membrane insertion protein [Vibrio cholera CIRS 101]
 gi|262024480|gb|EEY43166.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC27]
 gi|262030344|gb|EEY48986.1| OxaI/YidC membrane insertion protein [Vibrio cholerae INDRE 91/1]
 gi|297540062|gb|EFH76124.1| inner membrane protein [Vibrio cholerae MAK 757]
          Length = 541

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 140/570 (24%), Positives = 243/570 (42%), Gaps = 41/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         ++             +        +
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                + +  + +    L  SI+  G       L  Y  +++S    V L +     + +
Sbjct: 60  ---VAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V         N+   + + +             I + ++       +  I    
Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRG 174

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +V  V NNS  +        + ++   +  N       G      D    +  + 
Sbjct: 175 SYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234

Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S     + +W+ +   Y+AS +IP  E       + +++              
Sbjct: 235 DMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+  L+S   
Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQ 346

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
             VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 347 TFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536


>gi|254788526|ref|YP_003075955.1| preprotein translocase subunit YidC [Teredinibacter turnerae T7901]
 gi|259515729|sp|C5BKL7|OXAA_TERTT RecName: Full=Inner membrane protein oxaA
 gi|237685608|gb|ACR12872.1| preprotein translocase subunit YidC [Teredinibacter turnerae T7901]
          Length = 560

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 139/580 (23%), Positives = 245/580 (42%), Gaps = 48/580 (8%)

Query: 1   MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M    N  +   + +S +++  W  F      E    +     + +    + +       
Sbjct: 1   MNLLRNALIGGIVLVSFLLIIRWNEFQERKFEETQLQQSSANNSERVAPSIPSEQPQAPN 60

Query: 59  DDR---------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            +                        ++ +   +L   I+  G     L L  Y+  +  
Sbjct: 61  GEEVPDAPASDSKDAVEFTANADNDRQIHISTDTLDLVIDTNGGDIVRLALPQYYAMLHE 120

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVF 160
                 LL+ ++T + Y A+   V                  S   L P        L +
Sbjct: 121 KDNPFVLLNNNDT-STYIAQSGLVGPNGTDGKNGRPRFSAASSDYTLEPGKDTLVVDLKY 179

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQE 218
           +  + I+ +R     + YL  +   + N        +  G+I R  H P  A        
Sbjct: 180 QQESAIITKRFTFHRDSYLIDLEYLIENTGDTNWVGNLYGQIKRDDHNPAQAVGVGMQPF 239

Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
              A+   ++  ++   D           +  W+ +   Y+ S ++P ++       +  
Sbjct: 240 LGAAITTPETNYKKLKFDELAKEKLEVSNTGGWVAMVQHYFMSAWVPDQDKDQKYVLRKS 299

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
            + +  + +  +    T+ PG + +     +AG K    +         P  ++ ID+ W
Sbjct: 300 RNANMYFLSFTTLTSTTVAPGTTGSIKAQYYAGPKHIRVLEKIA-----PHLDLTIDYSW 354

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +FIAKP+F  + + + LVGN+G+AI+L T  +KL+FF  +   Y S A M+ +QP ++E
Sbjct: 355 LWFIAKPLFYALDFIHGLVGNWGLAIILLTCCIKLVFFYPSAMSYRSMAKMRKVQPLMNE 414

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L+E++     Q +   +++LYK   +NPL GC PILLQ+PVF A+Y +I  S+E+RHAPF
Sbjct: 415 LKERYGD-DRQRMSAELMKLYKKEKVNPLGGCLPILLQMPVFIALYWMIMESVELRHAPF 473

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + WI DL+  DP                     + P+IM ++M+IQ K++P PAD  QA 
Sbjct: 474 FLWIHDLSVRDPYF-------------------VLPLIMGVTMWIQQKLNPTPADPMQAK 514

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           ++  MP  F      FPAGL++YW  +N +SI QQ +I +
Sbjct: 515 VMQLMPFFFTALFMMFPAGLVLYWVVNNTLSITQQYIITR 554


>gi|167856364|ref|ZP_02479091.1| putative inner membrane protein translocase component YidC
           [Haemophilus parasuis 29755]
 gi|167852502|gb|EDS23789.1| putative inner membrane protein translocase component YidC
           [Haemophilus parasuis 29755]
          Length = 546

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 149/569 (26%), Positives = 260/569 (45%), Gaps = 37/569 (6%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M  N +  +   + +S +I   WQ  Y  P I+         QT +  NQ  +  A+  +
Sbjct: 1   MNSNRSLLIMGLLLVSFLIFTQWQQDYN-PEIQAQKQAMAQAQTQQVANQSSDVPASSNV 59

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
               +  +    + ++   L  +++  G    D +L  Y+ ++ SN+P   L    N K 
Sbjct: 60  ASINEQSTKGKTITIETDVLRLTVDTLGGDVVDSDLLKYNAELDSNTPFELL--QDNGKV 117

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT---PIKLVFKNANNILFERTISLD 175
            Y A+   V                      L        + L F+  + +  +      
Sbjct: 118 LYVAQSGLVGKNGIDTTAGRAQYQATAEKFALAEGQNEIDVPLTFEKDDVVYTKTFTLKR 177

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             Y   +   + N S + +   P G++     ++A N         A    +   ++   
Sbjct: 178 GSYNVAVNYHIKNGSAETLEVQPYGQLKHTLVESAGNFAMPTYTGGAYSSSEVNYKKYSF 237

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D    +  +      W  +   Y+ S +IP+++   +   +    G+      +      
Sbjct: 238 DEMAKANLSVDTKAGWAAVLQHYFVSAWIPNQDAENNLYTRT---GNGVGTIGYRGPVTQ 294

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           + P    T  + L+ G K+   +     +     F++ +D+GW +FIAKP+F L+++  +
Sbjct: 295 VAPNGEATIISHLWTGPKDQAAMAQVANN-----FDLTVDYGWAWFIAKPLFWLLTFIQS 349

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           +V N+G+AI+  T+ VK + +PL K QY S A M+ +QP+I E+RE+F     Q + + M
Sbjct: 350 IVSNWGLAIIGVTIVVKTILYPLTKAQYTSMAKMRMLQPRIQEMRERFGD-DRQRMSQEM 408

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NP+ GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP  IF 
Sbjct: 409 MKLYKEEKVNPMGGCLPILLQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIF- 467

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534
                             P++M  SM++  KMSP P AD  Q  ++N+MPV+F      F
Sbjct: 468 ------------------PLLMGGSMYLLQKMSPTPIADPVQQKVMNFMPVMFTVFFLWF 509

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           P+GL++YW  SN+I+I QQ +I +    +
Sbjct: 510 PSGLVLYWLTSNLITIAQQWLIYRNLEKK 538


>gi|120556799|ref|YP_961150.1| putative inner membrane protein translocase component YidC
           [Marinobacter aquaeolei VT8]
 gi|166975875|sp|A1U7J4|OXAA_MARAV RecName: Full=Inner membrane protein oxaA
 gi|120326648|gb|ABM20963.1| protein translocase subunit yidC [Marinobacter aquaeolei VT8]
          Length = 567

 Score =  356 bits (913), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 145/593 (24%), Positives = 243/593 (40%), Gaps = 60/593 (10%)

Query: 1   MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN----------- 47
           M+       A    +S ++V AW   Y  P+ E++   + +  +    +           
Sbjct: 1   MDIQRIVLFAGLAIVSYLMVLAWNEDYHQPQTEQVAEAQSSSDSSATNSTDDMILPEDNN 60

Query: 48  ------QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
                     + +       +        + +        I+  G    D +L  Y   +
Sbjct: 61  AGGEEFATPETGSLASTSANSDQDLADRFITVTTDVYELKIDRVGGNVVDSSLLQYDESL 120

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPI 156
            S  P+  L +   +   Y  E   +                                 I
Sbjct: 121 DSEQPLKLLTN--TSTRTYLLESGLIGRDGPDGSQAGEAPVFQAETGSYQLAEGEDELTI 178

Query: 157 KLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
            LV+   + +   +   L    Y   +   + N S    + +  G+I+R +    T+   
Sbjct: 179 NLVYTTDSGVAITKRYHLARNSYQIDVSYLIDNRSESPWQGNFTGKIVRDQAPDPTSQAS 238

Query: 216 V----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
           +      G +    +    +  + D+      N   +N WL     Y+ + +IP ++   
Sbjct: 239 MGIRAYLGMVISTPEDPYEKYDFEDL-SEKRVNQSVTNGWLAFLQHYFLTAWIPERDQKA 297

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
             Q     D    +   F     T+ PG++       + G K    +         P  +
Sbjct: 298 QFQTTRRGD---LHVMGFVYPATTVAPGETAEVGATAYVGPKIIDRLEALA-----PNLD 349

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+GW +FI+ P+F ++ +FY LVGN+G+AI+L TV VK +FF L+   Y S A M+ 
Sbjct: 350 RTVDFGWLFFISLPLFYILEWFYGLVGNWGVAIILLTVLVKAVFFHLSATSYRSMAKMRA 409

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           + P++  L+E +     Q + + M+ LYK   INPL GC PIL+Q+PVF ++Y V+  S+
Sbjct: 410 VAPQLTRLKELYGD-DRQRMSQEMMALYKREKINPLGGCLPILVQMPVFISLYWVLFESV 468

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           ++RHAPF  WI+DL+  DP                     I PI+M  SMFIQM ++P P
Sbjct: 469 QLRHAPFMLWIQDLSQMDPYF-------------------ILPILMGASMFIQMSLNPTP 509

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            D  QA I+  MP++F      FPAGL++YW  +N++SI QQ  I +   AE 
Sbjct: 510 PDPMQAKIMKLMPLIFTVFFLWFPAGLVLYWLVNNILSISQQWYITRKIEAET 562


>gi|145638178|ref|ZP_01793788.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae PittII]
 gi|145272507|gb|EDK12414.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae PittII]
 gi|309751334|gb|ADO81318.1| Inner membrane translocation protein YidC [Haemophilus influenzae
           R2866]
          Length = 541

 Score =  356 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 139/567 (24%), Positives = 253/567 (44%), Gaps = 38/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  +I           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  ++ S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+       + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRFGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A    ++  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETNYKKYSFAD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +    ++I 
Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVSIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+MP++F+     FP+
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIFMVFFLWFPS 507

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+I QQ +I +    +
Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|88811304|ref|ZP_01126560.1| 60 kDa inner membrane insertion protein [Nitrococcus mobilis
           Nb-231]
 gi|88791843|gb|EAR22954.1| 60 kDa inner membrane insertion protein [Nitrococcus mobilis
           Nb-231]
          Length = 548

 Score =  355 bits (911), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 141/561 (25%), Positives = 229/561 (40%), Gaps = 30/561 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME     F+ +AL  ++   W  +           +                     +  
Sbjct: 1   MENQR-LFLFLALGAVLFLLWDAWQQDYGPRPPTPQSTEQAVQAPQADGPAEELPTELRQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           +A   +   R+ +        IN  G       L  +       +P   L          
Sbjct: 60  QAGLAAQGMRISVVTDLFAIEINTVGGGIGSAKLLKHATSTDDPAPFTLLRDQGKPLFVV 119

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF-ERTISLDEHYL 179
            A L     +         +               + LV+   N I    R I     Y 
Sbjct: 120 QAGLRAKEGSAPGTQARFQSRQKAYQLASGEQQLVVPLVWHGPNGITVTRRYIFQRGKYT 179

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY-SDIE 238
             I   V N S          +++R +        G        +       QK   D  
Sbjct: 180 IDIEQEVQNASAAPWSAYQYTQLLRGEENKTGGLAGQVAYIGGAIYSPDDKYQKISFDEM 239

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
           +    +    N W+ +   Y+ +  +P +      +F     G   +    S+   TI P
Sbjct: 240 QEQALDRTVQNGWVAMVQHYFLAAMVPPRG--MTERFYSRIVGGDLFSLGMSSPWQTIQP 297

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
           G+S T    L+ G K+   +            E+ +D+G F  IAKPMF+++S+F+ +VG
Sbjct: 298 GQSGTFQTQLYLGPKDQERMASVAS-----GLELTVDYGIFTIIAKPMFVVLSWFHAVVG 352

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G AI+  TV +K +FF L++  Y S A M+ +QP++ +L+E+F     Q + + ++ L
Sbjct: 353 NWGWAIVFLTVLIKAVFFKLSETSYRSMARMRKLQPRMQQLKEQFGD-DRQRMNQELMTL 411

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NPL GC PIL+QIPVF A+Y V+  S+E+R APF  W++DL+A DP        
Sbjct: 412 YKREKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFILWLRDLSAPDPYY------ 465

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
                        + PIIM L+M  Q +++P P D  Q  I+ +MPVVF      FP GL
Sbjct: 466 -------------VLPIIMGLTMLAQQRLNPAPMDPIQQKIMLFMPVVFTGFFLFFPGGL 512

Query: 539 IIYWSWSNVISIVQQAVIMKM 559
           ++Y++ +N +SI+QQ +I + 
Sbjct: 513 VLYYTVNNSLSILQQWLITRR 533


>gi|152998480|ref|YP_001343315.1| 60 kDa inner membrane insertion protein [Marinomonas sp. MWYL1]
 gi|189036353|sp|A6W3V1|OXAA_MARMS RecName: Full=Inner membrane protein oxaA
 gi|150839404|gb|ABR73380.1| 60 kDa inner membrane insertion protein [Marinomonas sp. MWYL1]
          Length = 551

 Score =  355 bits (911), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 149/581 (25%), Positives = 251/581 (43%), Gaps = 49/581 (8%)

Query: 1   MERNWNYFV-AIALS-VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD-------N 51
           M+    +   A+ +S  ++   W   Y     + +    ++          D        
Sbjct: 1   MDFRRYFLWGALFISGYLLFLQWSQDYGPQSTQSVAQSTQSQSETNSQMSDDLPMATQST 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
           + A   I      ++    +E+   +L  +IN  G    +  L  Y  ++    P V L 
Sbjct: 61  TEANAEIPQSVTKIAPGKLIEVTTDTLRVAINPVGGDLVEAALLQYKKELGQPDPFVIL- 119

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNIL 167
               ++  Y  +   V        P    V+              +  + L + +A  + 
Sbjct: 120 -EDGSERTYVTQSGLVGQDGPDASPEGRPVYQSEKTAYTLADGENSLDVNLYYTDAKGVK 178

Query: 168 FERTI-SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIA 222
           + +T   +   Y  + + TV N S +  R +   +I R          +       G   
Sbjct: 179 YTKTFRFMKGKYRIRQLITVDNTSSNTWRGNLFAQIKRDNTPDPSKATSMGLQPYLGGAI 238

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                   +  +SD+++  I     +  W+ +   Y+ S +IP +      Q +   D +
Sbjct: 239 SDEQTKYTKVSFSDMKEDPIKTT-TTKGWVAVLQHYFVSAWIPEQGQKVTLQARTNGDFN 297

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
                 F+   + I PGK  T ++  + G K    +    ++      ++ +D+GW +++
Sbjct: 298 ---IIGFTGTSVEIAPGKQGTLSSTFYVGPKLQDHLESTAEN-----LDLTVDYGWLWWL 349

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           AKP+F L++   + V N+GIAI+L  V VK +FF L+   Y S A M+   P+I +L+EK
Sbjct: 350 AKPLFWLLTLIQSFVINWGIAIILIVVCVKAIFFKLSAASYRSMAKMRKFGPEIAKLKEK 409

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +     Q + + M+ LYK   INPL GC PIL+Q+PVF ++Y V+  S+E+RHAPF+ WI
Sbjct: 410 YGD-DRQKMSQEMMALYKKEKINPLGGCLPILVQMPVFLSLYWVLMESVELRHAPFFLWI 468

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DL+  DP                     I PI+M +SMF+Q  ++P P D  QA I+  
Sbjct: 469 HDLSVMDPYF-------------------ILPILMGISMFVQQSLNPTPPDPMQARIMKI 509

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           MPV F      FPAGL++YW  +N +SI+QQ VI K    E
Sbjct: 510 MPVAFSIFFLWFPAGLVLYWVTNNTLSILQQYVITKRIENE 550


>gi|229524907|ref|ZP_04414312.1| OxaI/YidC membrane insertion protein [Vibrio cholerae bv. albensis
           VL426]
 gi|229338488|gb|EEO03505.1| OxaI/YidC membrane insertion protein [Vibrio cholerae bv. albensis
           VL426]
          Length = 541

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 139/570 (24%), Positives = 245/570 (42%), Gaps = 41/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         ++             +      + +
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPVQN 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                + +  + +    L  SI+  G       L  Y  +++S    V L +     + +
Sbjct: 60  ---VAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V         N+   + + +             I + ++       +  I    
Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRG 174

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +V  V NNS  +        + ++   +  N       G      D    +  + 
Sbjct: 175 SYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234

Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S     + +W+ +   Y+AS +IP  E       + +++              
Sbjct: 235 DMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQTQLYSRVINNLGD---MGIRTPNK 291

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+  L+S   
Sbjct: 292 TIANGDKAEFEATLWVGPKLQEQMAAVA-----PHLDLVVDYGWLWFIAKPLHWLLSVIQ 346

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++V N+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 347 SVVINWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536


>gi|70733513|ref|YP_263288.1| putative inner membrane protein translocase component YidC
           [Pseudomonas fluorescens Pf-5]
 gi|123651831|sp|Q4K395|OXAA_PSEF5 RecName: Full=Inner membrane protein oxaA
 gi|68347812|gb|AAY95418.1| inner membrane protein, 60 kDa [Pseudomonas fluorescens Pf-5]
          Length = 566

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 143/587 (24%), Positives = 243/587 (41%), Gaps = 54/587 (9%)

Query: 2   ERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQ---------TVKQPNQV 49
                  + +AL   S ++V  W   Y    +   N                T    + +
Sbjct: 1   MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVASSTTAPGLPDAPTGTSAANDDI 60

Query: 50  DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
             + +       A   +    +++K   L  +++ +G     L L  Y            
Sbjct: 61  PRAASDTTAPAEAPVAASKDLIQIKTDVLDLAVDPQGGDIAQLRLPLYPRRQDHPEIPFQ 120

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANN 165
           L   +  +  Y A+   + +      P    +++                + L F     
Sbjct: 121 LF-DNGNERTYLAQSGLIGSNGPDASPAGRPIYSAEKKSYQLADGQDQLVVDLKFSKDGV 179

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGFI 221
              +R       Y   +   + N S      +   ++ R      +++         G  
Sbjct: 180 NYIKRFTLKRGLYDITVSYLIDNESAQPWTGAMFAQLKRDASSDPSSSTATGTATYLGAA 239

Query: 222 AVLGDKSLVEQKYSDIEKSSISN------FHESNSWLGISDKYWASVFIPSKETSFHSQF 275
                +   +    D++K +          +    W+     Y+ + +IP K  +     
Sbjct: 240 LWTSSEPYKKVSMKDMDKVNEDKSKAPITENVQGGWVAWLQHYFVTAWIPPKGENNQVLA 299

Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
           +  S G   Y   ++   +T+ PG    T+  L+AG K    +         P  E+ +D
Sbjct: 300 RKDSKG--NYIIGYTGPSMTVAPGAKAETSAILYAGPKSQAVLKELS-----PGLELTVD 352

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           +G+ +FIA+P+F L+ + ++LVGN+G +I+  T+ +K +FFPL+   Y S A M+ + PK
Sbjct: 353 YGFLWFIAQPIFWLLQHIHSLVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPK 412

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           +  L+EKF     Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR 
Sbjct: 413 LAALKEKFGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQ 471

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           APF  WI DL+  DP                     I PIIM  +MFIQ +++P P D  
Sbjct: 472 APFMLWITDLSIKDPFF-------------------ILPIIMGATMFIQQQLNPTPPDPM 512

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           QA ++  MP++F F    FPAGL++YW  +N +SI QQ  I +   A
Sbjct: 513 QAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKIEA 559


>gi|312964014|ref|ZP_07778485.1| preprotein translocase YidC subunit [Pseudomonas fluorescens WH6]
 gi|311282049|gb|EFQ60659.1| preprotein translocase YidC subunit [Pseudomonas fluorescens WH6]
          Length = 567

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 146/589 (24%), Positives = 246/589 (41%), Gaps = 56/589 (9%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL   S ++V  W   Y    +   N     + T         + AA  
Sbjct: 1   MDI-KRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVAANAVPTGLPDAASGTNTAASD 59

Query: 58  IDDRAQ----------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
              RA             + +  +++K   L  +I+ +G     L L  Y          
Sbjct: 60  DIPRAAGETKAPAEVAVATSTDLIQIKTDVLDLAIDPQGGDVAKLTLPLYPRRQDHPEIP 119

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNA 163
             L   +  +  Y A+   + T           +++                + L F   
Sbjct: 120 FQLF-DNGGERVYQAQSGLIGTNGPDASAAGRPIFSSEKKSYQLADGQDQLVVDLKFSKD 178

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEG 219
                +R       Y   +   + N S      +   ++ R      +++         G
Sbjct: 179 GVNYIKRFTLKRGLYDIVVTYLIDNQSAQPWTGAMFAQLKRDASSDPSSSTATGTATYLG 238

Query: 220 FIAVLGDKSLVEQKYSDIEK------SSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273
                  +   +    D++K       +   ++ +  W+     Y+ + +IP    +   
Sbjct: 239 AALWTSSEPYKKVSMKDMDKVAEDKLKAPITYNVNGGWVAWLQHYFVTAWIPQPGQNNAV 298

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
             +  S G   Y   ++   +T+ PG    T+  L+AG K    +         P  E+ 
Sbjct: 299 LARKDSKG--NYIIGYTGPAMTVAPGAKAETSATLYAGPKSQAVLKELS-----PGLELT 351

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +FIA+P+F L+ + +++VGN+G +I+  T+ +K LFFPL+   Y S A M+ + 
Sbjct: 352 VDYGILWFIAQPIFWLLQHIHSIVGNWGWSIIFLTMLIKGLFFPLSAASYKSMARMRAVA 411

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           PK+  L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EM
Sbjct: 412 PKLAALKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEM 470

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R APF  WI DL+  DP                     I PIIM  +MFIQ +++P P D
Sbjct: 471 RQAPFMLWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPD 511

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
             QA ++  MP++F F    FPAGL++YW  +NV+SI QQ  I +   A
Sbjct: 512 PMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNVLSISQQWYITRKIEA 560


>gi|229593497|ref|YP_002875616.1| putative inner membrane protein translocase component YidC
           [Pseudomonas fluorescens SBW25]
 gi|259515713|sp|C3K1G2|OXAA_PSEFS RecName: Full=Inner membrane protein oxaA
 gi|229365363|emb|CAY53750.1| putative inner membrane protein [Pseudomonas fluorescens SBW25]
          Length = 560

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 148/579 (25%), Positives = 244/579 (42%), Gaps = 50/579 (8%)

Query: 2   ERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
                  + +AL   S ++V  W   Y    +   N              + N+ +A   
Sbjct: 1   MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVATNQAAPAIPDTPLGNNASASAD 60

Query: 59  DDRAQALSMSPR----------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
              A   + +P           + +K   L  +I+ +G     L L  Y           
Sbjct: 61  VPSANGETSAPLETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPF 120

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNAN 164
            L   +  +  Y A+     T           V++                + L F    
Sbjct: 121 QLF-DNGGERTYLAQSGLTGTNGPDARATGRPVYSTEQKTYQLADGQNQLNVDLKFSLDG 179

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGF 220
               +R       Y  K+   + N S      +   ++ R      +++         G 
Sbjct: 180 VNYIKRFSFTRGLYDLKVTYLIDNESGKPWSGNLFAQLKRDASSDPSSSTATGTATYLGA 239

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
                ++   +    DI+K S+        W+     Y+ + +IP+K  +   Q +   D
Sbjct: 240 ALWTSNEPYKKVSMKDIDKGSLKET-VQGGWVAWLQHYFVTAWIPNKGDANLVQTR--KD 296

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
               Y   F+   +T+ PG    T+  L+AG K    +         P  E+ +D+G+ +
Sbjct: 297 SQGNYIIGFTGPALTVAPGAKAETSATLYAGPKSQAVLKELS-----PGLELTVDYGFLW 351

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           FIA+P+F L+ + +++VGN+G +I+  T+ +K +FFPL+   Y S A M+ + PK+  L+
Sbjct: 352 FIAQPIFWLLQHIHSIVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAALK 411

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR APF  
Sbjct: 412 EQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFML 470

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           WI DL+  DP                     I PIIM  +MFIQ +++P P D  QA ++
Sbjct: 471 WITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAKVM 511

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
             MP++F F    FPAGL++YW  +NV+SI QQ  I + 
Sbjct: 512 KMMPIIFTFFFLWFPAGLVLYWVVNNVLSISQQWYITRK 550


>gi|332288922|ref|YP_004419774.1| putative inner membrane protein translocase component YidC
           [Gallibacterium anatis UMN179]
 gi|330431818|gb|AEC16877.1| putative inner membrane protein translocase component YidC
           [Gallibacterium anatis UMN179]
          Length = 540

 Score =  355 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 147/566 (25%), Positives = 246/566 (43%), Gaps = 37/566 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + IAL  I    +Q + +    +     +   QT    ++V  + +       
Sbjct: 1   MDSRRSLLVIALLFISFLIYQQWEIDNNPQP---AQTATQTQVDKSEVPTTVSTAANTTI 57

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
                    + L++  L   I+  G    +  L  Y  ++ S +P   L   +  +  Y 
Sbjct: 58  DNNQQQGKIITLQSDVLRLKIDTLGGDIVEAQLLKYGAELHSETPFALL--KNTPQQVYI 115

Query: 122 AELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISLDEHY 178
           A+   +    +  +                       +   F        +        Y
Sbjct: 116 AQSGLIGANGSDTVAGRADYQVEGDNFTLAEGQNELSVPFTFTKDGVTYRKIFTLSRNSY 175

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
             K+   VTNNS   I+  P  ++     +++ N         A    ++  ++   +  
Sbjct: 176 DVKVNYEVTNNSGATIQVQPYAQLKHTLVESSGNIAMPTYTGGAYSSSETNYKKYSFEDM 235

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
           +           W  I   Y+ S +IP+++           D        F     +I  
Sbjct: 236 QKENLAIKTKQGWAAILQHYFVSAWIPNQDADNQLYTSTQGDFA---YIGFRGPVTSIAN 292

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
           G + T ++ L+ G K    +         P  ++ +D+GW +FIAKP+F L+ +  +LV 
Sbjct: 293 GATDTISSQLWVGPKLQNEMETVA-----PHLDLTVDYGWAWFIAKPLFWLLQFIQSLVH 347

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G+AI+  T+ VK + +PL K QY S A M+ +QPKI E+RE+F     Q + + M++L
Sbjct: 348 NWGLAIIGVTIVVKAILYPLTKAQYTSMAKMRMLQPKIQEMRERFGD-DRQRMSQEMMKL 406

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP        
Sbjct: 407 YKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY------ 460

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537
                        I P++M  SMF+  KMSP P AD  Q  ++ +MPV+F F    FP+G
Sbjct: 461 -------------ILPLLMGASMFLLQKMSPTPVADPMQQKVMMFMPVMFTFFFLWFPSG 507

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563
           L++YW  SN+I+IVQQ +I +    +
Sbjct: 508 LVLYWLVSNLITIVQQQLIYRGLEKK 533


>gi|327482918|gb|AEA77325.1| Inner membrane protein translocase component YidC, long form
           [Vibrio cholerae LMA3894-4]
          Length = 541

 Score =  355 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 140/570 (24%), Positives = 243/570 (42%), Gaps = 41/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         ++             +        +
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQAIQQAQSTGAAPAPSFSDELDPTPAQN 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                + +  + +    L  SI+  G       L  Y  +++S    V L +     + +
Sbjct: 60  ---VAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V         N+   + + +             I + ++       +  I    
Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRG 174

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +V  V NNS  +        + ++   +  N       G      D    +  + 
Sbjct: 175 SYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234

Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S     + +W+ +   Y+AS +IP  E       + +++              
Sbjct: 235 DMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+  L+S   
Sbjct: 292 TITNGDKAEFEATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQ 346

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
             VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 347 TFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536


>gi|330812749|ref|YP_004357211.1| Sec protein secretion system, subunit YidC [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380857|gb|AEA72207.1| Putative Sec protein secretion system, subunit YidC [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 560

 Score =  355 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 149/582 (25%), Positives = 247/582 (42%), Gaps = 50/582 (8%)

Query: 2   ERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
                  + +AL   S ++V  W   Y    +   N    N         V N+ A+   
Sbjct: 1   MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVAASNTAPSLPDAPVGNNAASNDD 60

Query: 59  DDRAQALSMSP----------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
             RA + + +P           +++K   L  +I+ +G     L L  Y           
Sbjct: 61  IPRAASDTSAPAEAPVAVSKDLIQIKTDVLELAIDPQGGDVAQLKLPLYPRRQDHPEIPF 120

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNAN 164
            L   +  +  Y A+   + T      P    +++                + L F    
Sbjct: 121 QLF-DNGNERTYLAQSGLIGTNGPDSNPAGRPIYSAEKKTYQLADGQDQLVVDLKFSKDG 179

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGF 220
               +R       Y   +   + N S      +   ++ R      +++         G 
Sbjct: 180 VNYIKRFTLKRGLYDVTVSYLIDNQSAQPWSGAMFAQLKRDASSDPSSSTATGTATYLGA 239

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
                 +   +    D++K  +        W+     Y+ + +IP K  S   Q +  S 
Sbjct: 240 ALWTSSEPYKKVSMKDMDKGPLKET-VQGGWVAWLQHYFVTAWIPQKGDSNVVQTRKDSK 298

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
           G   +   ++   +T  PG    T+  L+AG K    +         P  E+ +D+G+ +
Sbjct: 299 G--NFIIGYTGPTLTAAPGAKAETSAILYAGPKSQAVLKELS-----PGLELTVDYGFLW 351

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           FIA+P+F L+ + +++VGN+G +I+  T+ +K LFFPL+   Y S A M+ + PK+  L+
Sbjct: 352 FIAQPIFWLLQHIHSIVGNWGWSIIFLTMLIKGLFFPLSAASYKSMARMRAVAPKLAALK 411

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           E+      Q + ++M++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR APF  
Sbjct: 412 EQHGD-DRQKMSQSMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFML 470

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           WI DL+  DP                     I PIIM  +MFIQ +++P P D  QA ++
Sbjct: 471 WITDLSIKDPFF-------------------ILPIIMGATMFIQQQLNPTPPDPMQAKVM 511

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
             MP++F F    FPAGL++YW  +NV+SI QQ  I +   A
Sbjct: 512 KMMPIIFTFFFLWFPAGLVLYWVVNNVLSITQQWYITRKIEA 553


>gi|149190488|ref|ZP_01868759.1| putative inner membrane protein translocase component YidC [Vibrio
           shilonii AK1]
 gi|148835742|gb|EDL52708.1| putative inner membrane protein translocase component YidC [Vibrio
           shilonii AK1]
          Length = 540

 Score =  355 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 144/570 (25%), Positives = 246/570 (43%), Gaps = 42/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + I L+++    +Q +  Y     +  ++    T+  P+  D    A     
Sbjct: 1   MDSQRN-ILLIGLALVSFLLFQQWQSYKNPAPVPTQQTQSSTLPAPSFADEHDPAPGQSQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            A        + +K   L   IN  G       L  Y  ++ S+ P   L       + +
Sbjct: 60  TAA----EKIITVKTDVLTLGINTVGGDVVTAKLNEYATELESSEPFELLKDDQG--HQF 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V          S   + + +             + + F+       +  I    
Sbjct: 114 IAQSGLVGPQGIDLSSTSRPAYTVSADSFTIADGQDELRVPMTFEANGISYTKTFILKRG 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
           +Y   +   V NNS     F     + ++      + T     G      D    +  + 
Sbjct: 174 NYAIDVEYDVDNNSGQNATFGMYAHLRQNLQDKGGSITMPTYNGGAYSTQDVRYKKYSFE 233

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S        W  +   Y+A+ +IP +    +   + + +              
Sbjct: 234 DMQDRNLSLNLTDGQGWAAMIQHYFAAAWIPREAPGTNLYTRVIGNLGD---IGVRMPNA 290

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G+S T    L+AG K    +         P  ++++D+GW +FIAKP+  L+S+  
Sbjct: 291 TIADGQSATLKATLWAGPKLQKQMAETA-----PNLDLVVDYGWLWFIAKPLHTLLSFIQ 345

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
            +V N+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 346 GIVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 405 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLW 505

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I +    +
Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYRALEKK 535


>gi|187479885|ref|YP_787910.1| putative inner membrane protein translocase component YidC
           [Bordetella avium 197N]
 gi|123513533|sp|Q2KTI5|OXAA_BORA1 RecName: Full=Inner membrane protein oxaA
 gi|115424472|emb|CAJ51026.1| inner-membrane protein insertion factor [Bordetella avium 197N]
          Length = 559

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 148/587 (25%), Positives = 253/587 (43%), Gaps = 54/587 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M+      + +  S  ++  W N+         +  P  E+      N Q    P     
Sbjct: 1   MDI-RRTVLWMIFSFSLLLLWNNWQIHNGQPALFGGPSPEQNAPATANNQAATNPASNTP 59

Query: 52  SYAAVLID---------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
           +                  A A + +  V +    L  + +  GAQ     L  Y     
Sbjct: 60  AVPNAPAATSAPSSVPGSTAPAPAQAQEVVITTDVLRLTFSSTGAQIIRAELLKYPATAG 119

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
           S+ P+V L    +    Y A+   +    N     +         ++      ++   ++
Sbjct: 120 SDQPMVLL--DRSAGLTYTAQTGVIGAGQNFPTHLTPFAVTTNERELTGDKLVVRFEAES 177

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGF 220
               + +        Y   +   VTN        S   ++ R    P   ++ +    G 
Sbjct: 178 GGLRVIKTFTLDRGSYDVHVRHDVTNVGTAAQHPSVYLQLERDGNDPAGTSSFYHTFTGV 237

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                     +  +SDI K+  S   +  N W+GI   Y+A+ ++P + T   +    L 
Sbjct: 238 AVYSEQDKFQKVTFSDIAKNKASYIKQADNGWIGIVQHYFATAWVPKEGTPRTNDLLQLQ 297

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
                 +A        + PG ++++   L+ G ++   +         P  E+++D+GW 
Sbjct: 298 PNLFAARA--IEALGEVAPGATVSSDAQLWVGPQDQQAMAAVA-----PGLELVVDYGWL 350

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             IAKP+F LM++ ++L+GN+G  I+  TV +K +F+PLA   Y S A MK + P++  L
Sbjct: 351 TIIAKPLFTLMTWLHSLLGNWGWTIVALTVIIKAVFYPLASASYRSMARMKQVAPRLQAL 410

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +EK+     Q L +AM+++Y+T  INPL GC P+++QIPVF A+Y V+  S+EMR AP+ 
Sbjct: 411 KEKYGD-DRQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAPWI 469

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            WI DL+  DP                     I P +M  +MF+Q+K++P P D  QA +
Sbjct: 470 LWIHDLSVRDPYF-------------------ILPAVMMATMFLQIKLNPTPPDPVQAKV 510

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK---MHGAE 563
           +  MP+VF   +  FPAGL++YW  +N +SI+QQ  I +      A+
Sbjct: 511 MMVMPLVFGGMMFFFPAGLVLYWCVNNTLSILQQWSITRSITRQTAK 557


>gi|52424536|ref|YP_087673.1| putative inner membrane protein translocase component YidC
           [Mannheimia succiniciproducens MBEL55E]
 gi|81691469|sp|Q65VC2|OXAA_MANSM RecName: Full=Inner membrane protein oxaA
 gi|52306588|gb|AAU37088.1| YidC protein [Mannheimia succiniciproducens MBEL55E]
          Length = 540

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 138/570 (24%), Positives = 257/570 (45%), Gaps = 44/570 (7%)

Query: 1   MERNWNYF--VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   +      + +S ++   WQ  Y  P+       +      + P    ++   V  
Sbjct: 1   MDSRRSLLVLALLFISFLVYEQWQMDYNTPKPVATEQAQAVSSNAEMPASTSSTEGTV-- 58

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                 ++    + ++N      ++  G    + +L  Y  +++S++  + L    N  N
Sbjct: 59  ----DNVAQGKIISIQNDVFTLKVDTLGGDVVESSLTNYAAELNSDARFILL---QNKPN 111

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILFERTISLD 175
             +     +   N I+       + + + +        +L        + +++ +   + 
Sbjct: 112 EVYVAQSGLIGKNGIDTKAGRAAYQVEAEQFTLADGQNELRVPLTLEKDGVIYRKVFVIK 171

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
              Y  ++   + N + + I   P G++     Q++ +         A     +  ++  
Sbjct: 172 AGSYDIEVNYEIQNQTNEAIEVQPYGQLKHTLVQSSGSMAMPTYTGGAYSSADTNYKKYS 231

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
            D  K    +      W+ +   Y+ S +IP+++          +         +    +
Sbjct: 232 FDEMKDKNLSIDTKAGWVAVLQHYFVSAWIPNQDADNQLYTSTANG---LGFIGYRGPVV 288

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
            +  G S T  + L+ G K    +            ++ +D+GW +FIAKP+F L++   
Sbjct: 289 NVPAGGSETIKSALWTGPKLQNEMGAVAN-----HLDLTVDYGWAWFIAKPLFWLLNVIQ 343

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++V N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + 
Sbjct: 344 SIVSNWGLAIIGVTIVVKGILYPLTKAQYTSMAKMRMLQPKLQEMRERFGD-DRQRMSQE 402

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC P+L+Q+P+F A+Y     ++E+RHAPF+GWI+DL+A DP    
Sbjct: 403 MMKLYKEEKVNPLGGCLPLLIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY-- 460

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I PI+M  SMF+  KMSP P AD  Q  I+N+MP++F+     
Sbjct: 461 -----------------ILPILMGASMFLLQKMSPTPVADPMQQKIMNFMPLIFMVFFLW 503

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FPAGL++YW  SN+I+IVQQ +I +    +
Sbjct: 504 FPAGLVLYWLVSNIITIVQQQLIYRGLEKK 533


>gi|91777106|ref|YP_546862.1| protein translocase subunit yidC [Methylobacillus flagellatus KT]
 gi|122399286|sp|Q1GXL6|OXAA_METFK RecName: Full=Inner membrane protein oxaA
 gi|91711093|gb|ABE51021.1| protein translocase subunit yidC [Methylobacillus flagellatus KT]
          Length = 552

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 147/568 (25%), Positives = 255/568 (44%), Gaps = 38/568 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
                  + +  S  I+  W ++    +    +  +   Q+V+  +    + ++    ++
Sbjct: 1   MDTKRLILFVIFSFSILMLWDSWQRDQQPPAASQTQTTAQSVEDGSVPQAAKSSASAANQ 60

Query: 62  AQALSM-------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
           A   +        + R+ ++      SI+  G     L LR +  D       V L+   
Sbjct: 61  ASVPAETGFRLQSAERINVETDLYKASIDTIGGDLRRLELREHKDDEDQTKNFV-LMDDQ 119

Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174
           +    Y A+   +            +               ++L +K  N +   +  + 
Sbjct: 120 SAPMLYVAQTGLIGNGLPTHKEVFTSESTNYQLAPGEDKLDVRLTWKGDNGVEVHKIYTF 179

Query: 175 D-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVEQ 232
             + Y  ++   + NNS   +  S   +I+        +       G           + 
Sbjct: 180 RRDSYAIEVSYEIRNNSDTAVDPSVYYQIVHDNQSHQGSYMMPTFTGGAYYTEADKYKKL 239

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
            +SD+ K+++S    S+ W+G+   Y+ S +IP        +F         Y     + 
Sbjct: 240 SFSDMAKTNLSKN-ASDGWVGLVQHYFVSAWIPEDG--LVREFYTKKLSDNVYSIGSVSP 296

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
              I PG+S+T  + L+AG +    +         P  E  +D+GW   IA P+F ++S 
Sbjct: 297 LGNIAPGQSVTLKSRLYAGPQTQSELKSVA-----PGLEYTVDYGWLTVIATPLFWILSS 351

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
              +V N+G+AI+L T+ +KL+F+PL+   Y S ANM+ + P++  L+E++     Q L 
Sbjct: 352 IQKVVHNWGVAIILLTILIKLVFYPLSAASYRSMANMRELAPRLQRLKEQYGD-DRQKLH 410

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           +AM+++YKT  INP+ GC PIL+QIPVF A+Y V+  S+EMRHAPF  WI+DL+A DP  
Sbjct: 411 QAMMEMYKTEKINPMGGCLPILVQIPVFIALYWVLLGSVEMRHAPFMLWIQDLSAVDPYY 470

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532
                              + PI+M ++M IQ K++P PAD  QA ++  MP+VF     
Sbjct: 471 -------------------VLPILMGITMIIQTKLNPKPADPIQAKVMTIMPIVFSVFFF 511

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            FPAGL++YW  +N++SI QQ  I +  
Sbjct: 512 FFPAGLVLYWLVNNILSIAQQWYINRST 539


>gi|258626076|ref|ZP_05720927.1| inner membrane protein, 60 kDa [Vibrio mimicus VM603]
 gi|258581602|gb|EEW06500.1| inner membrane protein, 60 kDa [Vibrio mimicus VM603]
          Length = 539

 Score =  354 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 141/570 (24%), Positives = 243/570 (42%), Gaps = 43/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         ++             +        +
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPSQN 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            A     +  + +    L  SI+  G       L  Y  ++ S    V L +     + +
Sbjct: 60  AA-----AKTITVTTDVLTLSIDTIGGDIVTAKLNQYSEELDSAESFVLLQNTQG--HQF 112

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V         N+   + + +             I + ++       +  I    
Sbjct: 113 IAQSGLVGPQGIDVTSNNRPAYQVSADSFSLAEGQDELRIPMTYQANGIDYTKTFILKRG 172

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +V  V NNS +         + ++   +  N       G      D    +  + 
Sbjct: 173 SYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 232

Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S     + +W  +   Y+AS +IP  E       + +++              
Sbjct: 233 DMKDRNLSAPNDVTVNWAAMIQHYFASAWIPRNEPQAQLYSRVINNLGD---IGIRTPNK 289

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+  L+S+  
Sbjct: 290 TIANGDKAEFEATLWVGPKLQDQMAAVA-----PNLDLVVDYGWLWFIAKPLHWLLSFIQ 344

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 345 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 403

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 404 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 461

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 462 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 504

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 505 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 534


>gi|28872711|ref|NP_795330.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|38502973|sp|Q87TS1|OXAA_PSESM RecName: Full=Inner membrane protein oxaA
 gi|28855967|gb|AAO59025.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 562

 Score =  353 bits (906), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 147/585 (25%), Positives = 242/585 (41%), Gaps = 53/585 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N    N           N+ +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASA 59

Query: 58  IDDRAQ------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
               A             A++    + +K   L  +I+  G     L L  Y        
Sbjct: 60  DVPSATGNTTSAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPD 119

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFK 161
               L   +  +  + A+     T       +   V++             +  ++L F 
Sbjct: 120 VPFQLF-DNGGERTFLAQSGLTGTNGPDARASGRPVYSSAQKSYQLADGQDSMVVELKFS 178

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQ 217
                  +R       Y   +   V N S      +   ++ R                 
Sbjct: 179 ENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATY 238

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
            G       +   +    DI+K  I        W+     Y+ + +IP    +   Q + 
Sbjct: 239 LGAALWTAAEPYKKVSMKDIDKGQIKEN-VQGGWVAWLQHYFVTAWIPDHNVTNAVQTR- 296

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337
             D    Y   F++  +++ PG    TT  L+AG K    +         P  E+ +D+G
Sbjct: 297 -KDSQGNYIIGFTSPTLSVAPGAQGETTATLYAGPKSQAVLKELS-----PGLELTVDYG 350

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+ 
Sbjct: 351 FLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLA 410

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
            L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR AP
Sbjct: 411 VLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAP 469

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           +  WI DL+  DP                     I PIIM  +MFIQ +++P P D  QA
Sbjct: 470 WILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQA 510

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            ++  MP++F F    FPAGL++YW  +N +SI QQA I +  GA
Sbjct: 511 KVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIGA 555


>gi|104784447|ref|YP_610945.1| putative inner membrane protein translocase component YidC
           [Pseudomonas entomophila L48]
 gi|123079038|sp|Q1I2H4|OXAA_PSEE4 RecName: Full=Inner membrane protein oxaA
 gi|95113434|emb|CAK18162.1| Preprotein translocase subunit YidC [Pseudomonas entomophila L48]
          Length = 561

 Score =  353 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 143/584 (24%), Positives = 240/584 (41%), Gaps = 52/584 (8%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL   S ++V  W   Y    +   N            +    +  A  
Sbjct: 1   MDI-KRTILIVALAIVSYVMVLKWNQDYGQAALPTQNTAASTANASLPDSVPAGNNGANA 59

Query: 58  IDDRAQALS------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
                 A +                +++K   L  +I+  G     L L  +        
Sbjct: 60  DLPSVNAQNGTTGLAPAPVAVSKDLIQVKTDVLNLAIDPVGGDIVQLTLPKFPRRQDHPE 119

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKN 162
               L   +  +  Y A+   + T                    L          L F  
Sbjct: 120 IPFQLF-DNGGERVYLAQSGLIGTDGPDRASGRPLYATEQKSYQLADGQDQLVVDLKFSE 178

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QE 218
                 +R       Y   +   + N S      +   ++ R      +++         
Sbjct: 179 NGVNYIKRFSLKRGEYDLTVSYLIDNQSAQAWSGNMFAQLKRDASSDPSSSTATGTATYL 238

Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
           G       +   +    D++K  +     +  W+     Y+ + +IPSK  +   Q +  
Sbjct: 239 GAALWTASEPYKKVSMKDMDKGGLQEN-VAGGWVAWLQHYFVTAWIPSKSDNNAVQTR-- 295

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
            D    Y   ++   + +  G  + T+  L+AG K    +         P  E+ +D+G+
Sbjct: 296 KDSQGNYIIGYTGPALNVPAGGKVETSAMLYAGPKIQSKLKELS-----PGLELTVDYGF 350

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+ +
Sbjct: 351 LWFIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAQ 410

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L+E+F     Q + +AM++LYK   INPL GC PIL+Q+PVF A+Y V+  S+EMR AP+
Sbjct: 411 LKERFGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPW 469

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
             WI DL+  DP                     I PIIM  +MFIQ +++P P D  QA 
Sbjct: 470 MLWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAK 510

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           ++  MP++F F    FPAGL++YW  +N +SI QQ  I +   A
Sbjct: 511 VMKMMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRSIEA 554


>gi|229517141|ref|ZP_04406587.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC9]
 gi|229346204|gb|EEO11176.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC9]
          Length = 541

 Score =  353 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 140/570 (24%), Positives = 242/570 (42%), Gaps = 41/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         ++             +        +
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                + +  + +    L  SI+  G       L  Y  +++S    V L +     + +
Sbjct: 60  ---VAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V         N+   + + +             I + ++       +  I    
Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRG 174

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +V  V NNS  +        + ++   +  N       G      D    +  + 
Sbjct: 175 SYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234

Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S     + +W+ +   Y+AS +IP  E       + +++              
Sbjct: 235 DMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+  L+S   
Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQ 346

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
             VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 347 TFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P+ M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 464 -----------------ILPLQMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536


>gi|330961501|gb|EGH61761.1| membrane protein insertase [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 562

 Score =  353 bits (904), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 146/585 (24%), Positives = 240/585 (41%), Gaps = 53/585 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N    N           N+ +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASA 59

Query: 58  IDDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
               A A + S              + +K   L  +I+  G     L L  Y        
Sbjct: 60  DVPSATANTTSAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPD 119

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFK 161
               L   +  +  + A+     T           V++             +  ++L F 
Sbjct: 120 VPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYSSAQKTYQLADGQDSMVVELKFS 178

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQ 217
                  +R       Y   +   V N S      +   ++ R                 
Sbjct: 179 ENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATY 238

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
            G       +   +    DI+K  I        W+     Y+ + +IP    +   Q + 
Sbjct: 239 LGAALWTAAEPYKKVSMKDIDKGQIKET-VQGGWVAWLQHYFVTAWIPDHNATNQVQTR- 296

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337
             D    Y   F++  +++ PG    T+  L+AG K    +         P  E+ +D+G
Sbjct: 297 -KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDYG 350

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+ 
Sbjct: 351 FLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLA 410

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
            L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR AP
Sbjct: 411 LLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAP 469

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           +  WI DL+  DP                     I PIIM  +MFIQ +++P P D  QA
Sbjct: 470 WILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQA 510

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            ++  MP++F F    FPAGL++YW  +N +SI QQA I +   A
Sbjct: 511 KVMKLMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 555


>gi|293602692|ref|ZP_06685133.1| Oxa1 family cytochrome oxidase biogenesis protein [Achromobacter
           piechaudii ATCC 43553]
 gi|292818883|gb|EFF77923.1| Oxa1 family cytochrome oxidase biogenesis protein [Achromobacter
           piechaudii ATCC 43553]
          Length = 559

 Score =  353 bits (904), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 144/588 (24%), Positives = 249/588 (42%), Gaps = 49/588 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKN-----IQTVKQP 46
           M+      + +  S  ++  W N+         +  P       E +        +V   
Sbjct: 1   MDI-RRTVLWMIFSFSLLLLWNNWQIHNGKPSLFGGPTPAASTAEPQAGANNATPSVPSA 59

Query: 47  NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
                +  + +    A A + S  V +    L  + +  GAQ     L  Y      + P
Sbjct: 60  PTTTATAPSAVPGATAPAAARSEEVVVTTDVLRLTFDTMGAQLVRAELLKYPATGQPDKP 119

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNAN 164
            V L    +    Y  +   V   N    P   T + + S +         +    ++  
Sbjct: 120 TVLL--DRSAGLNYVVQSGVVGAPNGQSFPTHQTPFRVTSSERQLTGDNLVVSFEGESGG 177

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIA 222
             + +        Y   +   + N     +  +   ++ R    P   ++ +    GF  
Sbjct: 178 VKVTKTFTLHKGRYDIDVRHDLANVGSAPVTPALYLQLERDGNDPADTSSFYHTFTGFAV 237

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281
                   +  +SDIEK   +   +  N W+ +   Y+A+ ++P +     ++   +   
Sbjct: 238 YSEQDKFQKSTFSDIEKKKANYIKQADNGWIAVVQHYFATAWVPPQGKPRTNELLEVQKN 297

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
              Y A+       I PG +    + L+ G ++   +         P  E+++D+GW   
Sbjct: 298 --LYAARSIEAVGEIAPGSASRVDSHLWVGPQDQKAMAALA-----PGLELVVDYGWLTI 350

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           IAKP+F LM++ ++L+GN+G  I+  TV +K +FFPLA   Y S A MK + P++  L+E
Sbjct: 351 IAKPLFTLMTWLHSLLGNWGWTIVALTVLIKAIFFPLAAASYRSMARMKQVAPRLQALKE 410

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           K+     Q L  AM+++Y+T  INPL GC P+++QIPVF ++Y V+  S+EMR AP+  W
Sbjct: 411 KYGDDK-QKLNAAMMEMYRTEKINPLGGCLPMVVQIPVFISLYWVLLASVEMRGAPWILW 469

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
           + DL+  DP                     I P IM  +MF+Q+K++P P D  QA ++ 
Sbjct: 470 VHDLSIRDPYF-------------------ILPAIMMATMFLQIKLNPTPPDPIQAKVMM 510

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            MP+VF   +  FPAGL++YW  +N +SI QQ  I +    +      
Sbjct: 511 IMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWSITRSMQRKTEAAAN 558


>gi|189183736|ref|YP_001937521.1| putative inner membrane protein translocase component YidC
           [Orientia tsutsugamushi str. Ikeda]
 gi|189180507|dbj|BAG40287.1| 60 kD inner-membrane protein [Orientia tsutsugamushi str. Ikeda]
          Length = 567

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 205/570 (35%), Positives = 330/570 (57%), Gaps = 11/570 (1%)

Query: 1   ME-RNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS---YAA 55
           M+  N  N  +AI LS+ I+  W  FY  PR+ +M+N +K      + +  +      +A
Sbjct: 1   MDSDNRLNLILAITLSLAIILGWHFFYEKPRLIKMSNAQKEKIEYNKRSSTNKHLLHESA 60

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
           + I D+   +  S RV++    L GSI+LKG +FDDL L GY  DV  NSP V LLSPS 
Sbjct: 61  LKIKDKVDIIDYSTRVKIMTNKLHGSISLKGLRFDDLILVGYKQDVLENSPDVELLSPSE 120

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
           T  AYFAE+ +    N      ++         IL         + N +N+ F  ++S+D
Sbjct: 121 TATAYFAEVGWYCAKNADSDFPNSDTLWQTDKSILQANDTTTFTWTNKHNVQFIVSVSID 180

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
           ++Y+F I  ++ NNS  Q+     G I R+  +   +    Q    ++     L E  Y+
Sbjct: 181 DNYMFTINQSIVNNSKQQLAVQFHGLIHRNLAENENSANIFQGPIASIDSY--LNEVTYN 238

Query: 236 DIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN-E 293
            +++    +++ +   WLGISDKYW + FIP  +  + + F Y   G  +YQ  F +  E
Sbjct: 239 KLKEKKHIDYNLNVVHWLGISDKYWLTSFIPDVKYRYSTSFMYGKAGFEKYQVSFLSPKE 298

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
           +    G S++  + LF GAKE   + +Y K   I  F+  ID+GWFY + KP+F  +S+F
Sbjct: 299 VVNSDGGSLSVVHHLFLGAKEVKLLDYYAKKYNIKLFDRAIDFGWFYILTKPLFYTLSFF 358

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           Y   GNFG++I++ T+ +K++ F  + + Y S   M+++QP+I  L+E +     + L +
Sbjct: 359 YKYCGNFGVSILIVTILIKIMMFSFSNRSYSSMKKMRDLQPRIQRLQELYGDDKIK-LHQ 417

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            ++ LYK   ++        L+Q+P+FF++YKV+ +++EMRHAPF+ WIKDL+A DPT I
Sbjct: 418 EIMALYKKEKVSLAGSFLQSLIQLPIFFSLYKVLHVTIEMRHAPFFIWIKDLSALDPTCI 477

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAMILNWMPVVFVFALS 532
           F LFG+LPF++P F+++G WPI+ S +M +Q K++  P AD  QA +L +MP++ +   +
Sbjct: 478 FNLFGLLPFHVPWFLNIGAWPILTSATMMLQQKINPAPAADPAQAQVLKFMPLILLIVFN 537

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           +FPAGL+IYW+W+N++SIVQQ +I K++  
Sbjct: 538 NFPAGLLIYWTWNNILSIVQQFIINKINNK 567


>gi|212712607|ref|ZP_03320735.1| hypothetical protein PROVALCAL_03702 [Providencia alcalifaciens DSM
           30120]
 gi|212684823|gb|EEB44351.1| hypothetical protein PROVALCAL_03702 [Providencia alcalifaciens DSM
           30120]
          Length = 553

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 148/574 (25%), Positives = 262/574 (45%), Gaps = 53/574 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      +E    + + Q    P+   N   AV   +
Sbjct: 1   MDSQRNLLL-IALLFVSFLVWQAWESDKVAQETKAVQVSQQKTDMPSSASNDGQAVTGSE 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +K   L   IN +G   D+ +L  Y   ++S  P   L   +     Y
Sbjct: 60  ------QGKLIAVKTDVLDIRINTRGGDIDEADLLAYPATLNSPDPFRLL--ETTPGFVY 111

Query: 121 FAELDYVST-------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
            A+   +          NN + P   +       K       I + F + N +++++T  
Sbjct: 112 QAQSGLIGPHGPDNPANNNGQRPLYTSDATSFELKDGQDELRIPMTFTDNNGVVYQKTYI 171

Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-------FGVQEGFIAVLG 225
           L    Y   +   + N +   +  +  G++ +                     G      
Sbjct: 172 LKRGKYTVDVEYNIQNPTAQPLTLAFFGQLKQTIALPEQRDTGSSNFALHTYRGAAYSSD 231

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           + +  +  +SDIE  ++S       W+ +  +Y+A+ +IP+      S F  +       
Sbjct: 232 ENNYKKYSFSDIEDKNLSLT-TKGGWVAMLQQYFATAWIPASSEQ--STFYTIDLDKKSA 288

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
              + +  +TI    + T ++ L+ G +    +         P  ++ +D+GW +FI++P
Sbjct: 289 IVGYKSEPLTIASNGAATYSSTLWVGPEIQSEMAEVA-----PHLDLTVDYGWLWFISQP 343

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+ + +  VGN+GIAI++ T  V+ + +PL K QY S A M+ +QPK+  +RE+   
Sbjct: 344 LFKLLKFIHGFVGNWGIAIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGD 403

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q + + M+ LYK+  +NPL GC P+L+Q+P+F A+Y ++  S+E+RHAPF+GWI+DL
Sbjct: 404 DK-QRMSQEMMALYKSEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFFGWIQDL 462

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524
           +A DP                     I P++M ++MF+  KMSP    D  Q  I+ +MP
Sbjct: 463 SAQDPYY-------------------ILPVLMGVTMFVIQKMSPTTVTDPMQQKIMMYMP 503

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           VVF      FP+GL++Y+  SN+++I+QQ VI +
Sbjct: 504 VVFTVFFLWFPSGLVLYYIVSNLVTIIQQQVIYR 537


>gi|330964185|gb|EGH64445.1| membrane protein insertase [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 562

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 147/585 (25%), Positives = 241/585 (41%), Gaps = 53/585 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N    N           N+ +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASA 59

Query: 58  IDDRAQ------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
               A             AL+    + +K   L  +I+  G     L L  Y        
Sbjct: 60  DVPSATGNTTSAAPLETPALASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPD 119

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFK 161
               L   +  +  + A+     T       +   V++             +  ++L F 
Sbjct: 120 VPFQLF-DNGGERTFLAQSGLTGTNGPDARASGRPVYSSAQKSYQLADGQDSMVVELKFS 178

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQ 217
                  +R       Y   +   V N S      +   ++ R                 
Sbjct: 179 ENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATY 238

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
            G       +   +    DI+K  I        W+     Y+ + +IP    +   Q + 
Sbjct: 239 LGAALWTAAEPYKKVSMKDIDKGQIKEN-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR- 296

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337
             D    Y   F++  +++ PG    TT  L+AG K    +         P  E+ +D+G
Sbjct: 297 -KDSQGNYIIGFTSPTLSVAPGAQGETTATLYAGPKSQAVLKELS-----PGLELTVDYG 350

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+ 
Sbjct: 351 FLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLA 410

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
            L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR AP
Sbjct: 411 VLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAP 469

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           +  WI DL+  DP                     I PIIM  +MFIQ +++P P D  QA
Sbjct: 470 WILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQA 510

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            ++  MP++F F    FPAGL++YW  +N +SI QQA I +   A
Sbjct: 511 KVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 555


>gi|217970730|ref|YP_002355964.1| hypothetical protein Tmz1t_2331 [Thauera sp. MZ1T]
 gi|217508057|gb|ACK55068.1| 60 kDa inner membrane insertion protein [Thauera sp. MZ1T]
          Length = 552

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 142/569 (24%), Positives = 243/569 (42%), Gaps = 39/569 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT------VKQPNQVDNSYAA 55
                  + +  S  +V  W  +    +      +            V  P         
Sbjct: 1   MDQRRLILFLIFSFSLVMLWDGWIKQNQPPVAQQQAAAGSAAPADGAVPTPTLSATPGQP 60

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
           V+  ++A   + +PR  ++   L   ++ +G     L L+ +     +    V LL    
Sbjct: 61  VVPGEQAAQAAAAPRAVVETDLLRAEVSAQGGDIVRLELKQHKASGEAGGNFV-LLDDGT 119

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL- 174
           T++ Y A+   +                 +  K       ++L     N +   + +   
Sbjct: 120 TRHQYAAQSGLIGEGLPTHKTLFQLPAGELRLKDGENGVELRLQAPEQNGVQVTKVMRFA 179

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT---FGVQEGFIAVLGDKSLVE 231
              YL  +   + N S   +      ++ R                 G           +
Sbjct: 180 RGSYLIDVSYEIRNGSGQALAPHAYFQLTRDGNPAEQVEAFGVTTFTGPAFYTDANKFQK 239

Query: 232 QKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
            +++DI          + + W+ +   Y+   ++P          + L  G+  + A   
Sbjct: 240 VQFADITDGDAKFPKTAADGWVAMVQHYFVGAWLPKAGEQREYFARAL--GNNLFSAGVI 297

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
               +I  G     +  L+AG +E   +         P  ++++D+GW   IA P+F ++
Sbjct: 298 LPVASIATGAEGAVSTRLYAGPQEQDKLEGIA-----PGLDLVVDYGWLTVIAAPLFWVL 352

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
           S+F+NL GN+G AI+L TV +K +FFPL+   Y S A M+ + P++  ++E +     ++
Sbjct: 353 SWFHNLTGNWGWAIILVTVAIKAIFFPLSAASYKSMAKMRVLGPRLQRMKEMYGNDKAKM 412

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
            Q+ M+ LY+T  INPL GC PIL+QIPVF A+Y V+  S+EMRHAP+ GWI+DL+A DP
Sbjct: 413 -QQEMMNLYRTEKINPLGGCLPILVQIPVFIALYWVLLGSVEMRHAPWLGWIQDLSAKDP 471

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I PIIM +SM +QMK++P P D  QA ++  MP++F F 
Sbjct: 472 YF-------------------ILPIIMGVSMLVQMKLNPTPPDPIQAKVMMAMPIIFTFM 512

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
              FP+GL++YW  +N +SI QQ  I +M
Sbjct: 513 FLWFPSGLVLYWVVNNCLSIAQQWQITRM 541


>gi|146284522|ref|YP_001174675.1| putative inner membrane protein translocase component YidC
           [Pseudomonas stutzeri A1501]
 gi|166977401|sp|A4VS82|OXAA_PSEU5 RecName: Full=Inner membrane protein oxaA
 gi|145572727|gb|ABP81833.1| inner membrane protein, 60 kDa [Pseudomonas stutzeri A1501]
          Length = 556

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 143/584 (24%), Positives = 241/584 (41%), Gaps = 49/584 (8%)

Query: 1   MERNWNYFVAIALS---VIIVYAWQNFYVYPRIEEMNNERK----------NIQTVKQPN 47
           M+      + +AL+    ++V  W   Y    +     + +          +  T    N
Sbjct: 1   MDI-KRSILLVALAVVAYLMVLQWNQDYGQAALPTETAQSQPAAPALPDSPSATTEGNAN 59

Query: 48  QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
            V              +   S  + ++   L  +I+ +G    +L+L  Y          
Sbjct: 60  DVPAVAGQQQASALPTSAPSSQLIRVRTDVLDLAIDPRGGDIVELHLPQYPRRQDRPDVP 119

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIKLVFKNANN 165
             L    +++  Y A+   +    +               +         + L +     
Sbjct: 120 FQLF-ERSSERTYEAQSGLIGDGPDKASGRPQYSSEKTEYQLAEGQDALVVDLNYSADGV 178

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIA 222
              +R      +Y  K+   + N S         G++ R K   P ++T T        A
Sbjct: 179 NYIKRFTLERGNYALKVNYLIDNQSQQPWTGYLFGQLKRDKSGDPSSSTATGTATYLGAA 238

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
           +        +                  W+     Y+ + +IP    +   Q +   D  
Sbjct: 239 LWTKDEPYRKVSMSNMDDKNLRETVQGGWIAWLQHYFVTAWIPQAGDTNQVQTR--KDSQ 296

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             Y   F+   +T+  G    T   L+AG K    +         P   + +D+G  +FI
Sbjct: 297 GNYIIGFTGPAVTVPAGAQGETGATLYAGPKSQDKLEELS-----PGLRLTVDYGILWFI 351

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           A+P+F L+   + L+GN+G +I++ T+ +KL FFPL+   Y S A M+ + PK+  L+E+
Sbjct: 352 AQPIFWLLQNIHALLGNWGWSIIVLTIVIKLAFFPLSAASYRSMARMRAVSPKMQALKEQ 411

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           F     Q + +AM++LYK   INPL GC PIL+Q+PVF A+Y V+  S+EMR AP+  WI
Sbjct: 412 FGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWMFWI 470

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DL+  DP                     I PIIM ++MFIQ +++P P D  QA ++  
Sbjct: 471 TDLSIKDPYF-------------------ILPIIMGVTMFIQQQLNPTPPDPMQARVMKL 511

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH--GAEI 564
           +P++F F    FPAGL++YW  +N++SI QQ  I +    GA+ 
Sbjct: 512 LPIIFTFFFLWFPAGLVLYWVVNNILSIAQQWYITRQIEAGAKP 555


>gi|327482911|gb|AEA86221.1| putative inner membrane protein translocase component YidC
           [Pseudomonas stutzeri DSM 4166]
          Length = 556

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 143/584 (24%), Positives = 240/584 (41%), Gaps = 49/584 (8%)

Query: 1   MERNWNYFVAIALS---VIIVYAWQNFYVYPRIEEMNNE----------RKNIQTVKQPN 47
           M+      + +AL+    ++V  W   Y    +     +            +  T    N
Sbjct: 1   MDI-KRSILLVALAVVAYLMVLQWNQDYGQAALPTETAQGQPAAPALPDSPSATTEGNAN 59

Query: 48  QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
            V              +   S  + ++   L  +I+ +G    +L+L  Y          
Sbjct: 60  DVPAVAGQQQASALPTSAPSSQLIRVRTDVLDLAIDPRGGDIVELHLPQYPRRQDRPDVP 119

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIKLVFKNANN 165
             L    +++  Y A+   +    +               +         + L +     
Sbjct: 120 FQLF-ERSSERTYEAQSGLIGDGPDKASGRPQYSSEKTEYQLAEGQDALVVDLNYSADGV 178

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIA 222
              +R      +Y  K+   + N S         G++ R K   P ++T T        A
Sbjct: 179 NYIKRFTLERGNYALKVNYLIDNQSQQPWTGYLFGQLKRDKSGDPSSSTATGTATYLGAA 238

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
           +        +                  W+     Y+ + +IP    +   Q +   D  
Sbjct: 239 LWTKDEPYRKVSMSNMDDKNLRETVQGGWIAWLQHYFVTAWIPQAGDTNQVQTR--KDSQ 296

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             Y   F+   +T+  G    T   L+AG K    +         P   + +D+G  +FI
Sbjct: 297 GNYIIGFTGPAVTVPAGAQGETGATLYAGPKSQDKLEELS-----PGLRLTVDYGILWFI 351

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           A+P+F L+   + L+GN+G +I++ T+ +KL FFPL+   Y S A M+ + PK+  L+E+
Sbjct: 352 AQPIFWLLQNIHALLGNWGWSIIVLTIVIKLAFFPLSAASYRSMARMRAVSPKMQALKEQ 411

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           F     Q + +AM++LYK   INPL GC PIL+Q+PVF A+Y V+  S+EMR AP+  WI
Sbjct: 412 FGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWMFWI 470

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DL+  DP                     I PIIM ++MFIQ +++P P D  QA ++  
Sbjct: 471 TDLSIKDPYF-------------------ILPIIMGVTMFIQQQLNPTPPDPMQARVMKL 511

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH--GAEI 564
           +P++F F    FPAGL++YW  +N++SI QQ  I +    GA+ 
Sbjct: 512 LPIIFTFFFLWFPAGLVLYWVVNNILSIAQQWYITRQIEAGAKP 555


>gi|68171979|ref|ZP_00545283.1| 60 kDa inner membrane protein [Ehrlichia chaffeensis str. Sapulpa]
 gi|67998597|gb|EAM85346.1| 60 kDa inner membrane protein [Ehrlichia chaffeensis str. Sapulpa]
          Length = 585

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 213/585 (36%), Positives = 325/585 (55%), Gaps = 19/585 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N  +A+ LSV+I+  W+  Y      +   E         P   DN         
Sbjct: 7   MVEVRNLILAVILSVLIMMGWRFIYDKFFTTQHAIEDNTSSDAMIPEIDDN--FIHKTRS 64

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                + + R++L N  + GSI+LKGAQFDDL  + YH+    NS  + LLSP  T+N Y
Sbjct: 65  EVIESNTNIRIKLSNEKMNGSISLKGAQFDDLIFKNYHVTPDKNSEGIVLLSPEETENVY 124

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
           F E  ++   + I +P  +++WN      L+P  PI L + N   ++F+  I+LD  Y+F
Sbjct: 125 FIEFGWIDPQHKITVPTHSSIWNSDQST-LSPNNPITLTWDNKQGVVFKIKITLDNDYMF 183

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
           KI   VTNN+   I   P GRI R K     + +   EG +   G+ +L E  Y  I K 
Sbjct: 184 KIEQMVTNNTDSIINLIPYGRINRSKHTAEKSYWISHEGAVGSFGN-TLKEWTYKAITKE 242

Query: 241 SISNFHESNS------WLGISDKYWASVFIPSKETSFHSQFK---YLSDGHARYQAKFSA 291
                 + +       W+GI DKYW +  IP+     +  F       +   R+Q  FS 
Sbjct: 243 KNIKIQQQDINDNQNQWIGIGDKYWFTALIPNVSQKSNLNFHVKHAKHNSKDRFQVDFSH 302

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
           +     P  ++T+ N+LFAGAKE   +  Y+ +L I  F+  +D+G  YFI KP+F+L+ 
Sbjct: 303 DNYIAHPNNTVTSINYLFAGAKELKLLDTYKDNLNISLFDKAVDFGVLYFITKPVFLLLE 362

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           YF N++GNFG+AI+L T+ +KL+ FPL+ K YVS   ++++QP I  ++E +K    ++ 
Sbjct: 363 YFNNVIGNFGLAILLLTIVIKLIMFPLSHKSYVSMLKLRHLQPDIVRIKELYKNDNDKM- 421

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
            K +  ++K +N+NP++G  P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL++ D  
Sbjct: 422 SKEISAIFKKNNVNPMSGFVPVLIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLSSFDTA 481

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFV 528
           NI T+FG+L F  P  + +GI P+I+ ++M IQ K++       DK QA  + ++P +F+
Sbjct: 482 NILTIFGLLKFNPP--ICIGILPVILGITMIIQQKLNNHSSLNQDKTQANFMKFLPYIFI 539

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           F  SSFPAGLIIYW  SN I+IVQQ +I      +      ++  
Sbjct: 540 FIFSSFPAGLIIYWICSNSITIVQQLIIKHYVTKKFNFYKTVQQE 584


>gi|209693637|ref|YP_002261565.1| putative inner membrane protein translocase component YidC
           [Aliivibrio salmonicida LFI1238]
 gi|254772743|sp|B6EP40|OXAA_ALISL RecName: Full=Inner membrane protein oxaA
 gi|208007588|emb|CAQ77688.1| inner membrane protein [Aliivibrio salmonicida LFI1238]
          Length = 541

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 143/571 (25%), Positives = 247/571 (43%), Gaps = 43/571 (7%)

Query: 1   MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N   +A+AL S ++   WQ      +   ++  ++  +    P     + +    
Sbjct: 1   MDTQRNILLLALALVSFLLFQQWQVETNPQQPATVSTVQQTHKNGDVP-----TSSTANS 55

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           D    +      + +    L   ++  G    +  L  Y  ++ S +  V L + ++  +
Sbjct: 56  DAPVDSAQSDKLITITTDVLTLKVDTLGGDIIESVLNKYDAELDSKAKFVLLKNDAD--H 113

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTISLD 175
           +Y A+   +                  +  +L          L  +       +  I   
Sbjct: 114 SYIAQSGLIGPQGIDSNTGRAQFTAKKTDYVLADGQNELRIPLTLEKNGITYTKTLIVKR 173

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKY 234
           + Y   +  TV N S           + ++      + T     G      D    +  +
Sbjct: 174 DSYAIDVEYTVNNQSSAPATVEMYANLKQNLLDDGGSLTMPTYRGGAYSTEDTRYKKYSF 233

Query: 235 SDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
            D+E  ++S    +   W G+   Y+AS +IP          +   D             
Sbjct: 234 DDMEDKNLSIDMTNGQGWAGMLQHYFASAWIPRNVNDATLTTRVAGD---YGYIGVRMPS 290

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
           +TI  G+  T T  L+ G K  P +    K       ++ +D+GW +FIA P+  L+S+ 
Sbjct: 291 VTIPAGQEDTLTATLWTGPKLQPQMAATAK-----YLDLSVDYGWLWFIASPLHKLLSFI 345

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
            ++VGN+G+AIM+ T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + +
Sbjct: 346 QSIVGNWGLAIMILTFIVRGAMYPLTKAQYTSMAKMRMLQPKLAAMRERIGD-DRQRMSQ 404

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            M++LYK   +NPL GC PI+LQ+P+F ++Y  +  S+E+RHAPF+GWI DL+A DP   
Sbjct: 405 EMMELYKKEKVNPLGGCLPIVLQMPIFISLYWALMESVELRHAPFFGWITDLSAQDPYY- 463

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532
                             I P++M  SMF+  KMSP    D  Q  I+ ++PV+F     
Sbjct: 464 ------------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFIPVMFTVFFL 505

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            FPAGL++YW  SNV++++QQ +I +    +
Sbjct: 506 WFPAGLVLYWLVSNVVTLIQQTLIYRALEKK 536


>gi|331017731|gb|EGH97787.1| membrane protein insertase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 562

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 146/585 (24%), Positives = 241/585 (41%), Gaps = 53/585 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N    N           N+ +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASA 59

Query: 58  IDDRAQ------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
               A             A++    + +K   L  +I+  G     L L  Y        
Sbjct: 60  DVPSATGNTASAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPD 119

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFK 161
               L   +  +  + A+     T       +   V++             +  ++L F 
Sbjct: 120 VPFQLF-DNGGERTFLAQSGLTGTNGPDARASGRPVYSSAQKSYQLADGQDSMVVELKFS 178

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQ 217
                  +R       Y   +   V N S      +   ++ R                 
Sbjct: 179 ENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATY 238

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
            G       +   +    DI+K  I        W+     Y+ + +IP    +   Q + 
Sbjct: 239 LGAALWTAAEPYKKVSMKDIDKGQIKEN-VQGGWVAWLQHYFVTAWIPDHNVTNAVQTR- 296

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337
             D    Y   F++  +++ PG    TT  L+AG K    +         P  E+ +D+G
Sbjct: 297 -KDSQGNYIIGFTSPTLSVAPGAQGETTATLYAGPKSQAVLKELS-----PGLELTVDYG 350

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+ 
Sbjct: 351 FLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLA 410

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
            L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR AP
Sbjct: 411 VLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAP 469

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           +  WI DL+  DP                     I PIIM  +MFIQ +++P P D  QA
Sbjct: 470 WILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQA 510

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            ++  MP++F F    FPAGL++YW  +N +SI QQA I +   A
Sbjct: 511 KVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 555


>gi|114322029|ref|YP_743712.1| protein translocase subunit yidC [Alkalilimnicola ehrlichii MLHE-1]
 gi|122310593|sp|Q0A4L5|OXAA_ALHEH RecName: Full=Inner membrane protein oxaA
 gi|114228423|gb|ABI58222.1| protein translocase subunit yidC [Alkalilimnicola ehrlichii MLHE-1]
          Length = 562

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 136/571 (23%), Positives = 245/571 (42%), Gaps = 38/571 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF-----YVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55
           ME     F+ +ALS++ +  W ++           E +  E       + P++  +    
Sbjct: 1   MENQR-IFLFLALSILGLLLWTSWERDTRAPVATEEVVEAEDDVPAPAETPDEAPDPADG 59

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
                    +    RV +    +   I+ +G     ++L  +    + ++P   +    +
Sbjct: 60  ETPARDRAEVEDERRVRVVTDLMDLEISTRGGDIRRVDLLQHGTTATDDTPFRLMADDRD 119

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN--ILFERTIS 173
                   L   S              +            ++L + + N    +      
Sbjct: 120 PLFIAQTGLIDDSDNRPDHRALFRAERDEYRLSEGEDEIQVRLTWADENRGIEVARVYTV 179

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS--LVE 231
             + Y+  +   V N   ++ R     ++ R+     T  + +       +        +
Sbjct: 180 QRDSYVIDVRHQVRNAGDEEWRGYSYFQLRRNPDPPGTTPWYIYTFTGGSIYSPDDRFEK 239

Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
             + D++ +S+S       W  +   Y+   +IP +  +     +  +     Y    S+
Sbjct: 240 ISFDDMDDTSLSRDIRD-GWAAMIQHYFLGAWIPPESQALRYYTRAQAGNE--YVLGMSS 296

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
              T+ PG      N LF G KE   +      +      + +D+G+   +AKP+F L+ 
Sbjct: 297 GRQTVQPGGEAEFVNRLFVGPKEQDRLRELHDSMT-----LSVDYGFLTVLAKPLFWLLD 351

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
              ++VGN+G+AI+L T+ +KL F+ L+   Y S A M+ +QP++ +L+E+      Q L
Sbjct: 352 NIQDIVGNWGVAIILVTLLIKLAFYKLSATSYRSMAKMRRVQPRMQQLKERHGDDK-QAL 410

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
            +AM++LYK   INPL GC PIL+QIPVF A+Y V+  S+E+RHAPF  WI+DL++ DP 
Sbjct: 411 NQAMMELYKKEKINPLGGCLPILVQIPVFIALYWVLLESVELRHAPFMLWIQDLSSRDPY 470

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531
                               + P++M  +MF+Q +++P P D  Q  I+  +P+VF    
Sbjct: 471 F-------------------VLPLLMGATMFLQQRLNPAPLDPIQQRIMMALPIVFTGFF 511

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
             FPAGL++YW  +N +SI QQ  IM+   A
Sbjct: 512 MLFPAGLVLYWLVNNGLSIAQQWYIMRNLEA 542


>gi|307547061|ref|YP_003899540.1| preprotein translocase subunit YidC [Halomonas elongata DSM 2581]
 gi|307219085|emb|CBV44355.1| K03217 preprotein translocase YidC subunit [Halomonas elongata DSM
           2581]
          Length = 566

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 133/580 (22%), Positives = 230/580 (39%), Gaps = 51/580 (8%)

Query: 15  VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR------------- 61
            +IV  W   Y             +       +  D   + + +                
Sbjct: 17  YLIVVQWNQDYGQATQAPEAPAITSDSPASSQDAADTDSSDLSVPSSGTANAGNADMGSA 76

Query: 62  ----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
                 A +    V +    L   I+ +G       L  +     ++ P V L    N  
Sbjct: 77  MPGDKAASNSRDLVAVATDVLDIRIDPQGGDIVYAALPQHKYAEDTDQPFVLL--SDNAT 134

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
            +Y A        +   +  +                 + L        + +R     + 
Sbjct: 135 RSYVARSGLQLEGHQGRIAFTPEK-TEYRLNEGDDQLQVDLSATVNGVDVIKRFTFDRDS 193

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT----FGVQEGFIAVLGDKSLVEQK 233
           Y   +   + N S   +     G+++R      ++          G      +   ++  
Sbjct: 194 YAVNVAYLLDNPSETPVTARFVGQLVRDNSSDPSSGPKMGMRSFLGAAFSTPEDRYLKVD 253

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
           + DI      N      W+ +   Y+ S + P ++      F   +D   R  A F+   
Sbjct: 254 FDDIRDGKFENRDVEGGWVAMIQHYFTSAWAPPQDQKN--LFYTATDSQNRNVAAFAGPT 311

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
            T+      T    L+ G K    +         P  E+ +D+GW +FIA P+F L+ + 
Sbjct: 312 RTLGAESKATLAATLYVGPKIQDRLEAVA-----PNLELTVDFGWLWFIANPLFWLLDHI 366

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
            +++GN+G +I++ T+ VK    PL+ K Y S A M+ + P++  L+E++     Q + +
Sbjct: 367 QDVIGNWGWSIVILTLLVKTALLPLSAKAYKSMARMRKLGPEMQRLKEQYGD-DRQKMSQ 425

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            M++ Y+   INPL GC PI++Q+PVF A+Y ++  S+E+RHAPF  WI DL+  DP   
Sbjct: 426 EMMKFYQKEKINPLGGCLPIVVQMPVFIALYWMLLESVELRHAPFMFWITDLSVKDPYF- 484

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533
                             + PI+M  SMF+Q  ++P P D  QA I+  +PVVF F    
Sbjct: 485 ------------------VLPILMGASMFVQQLLNPTPPDPTQAKIMKLLPVVFTFFFLW 526

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           FPAGL+IYW  +N+ SI QQ  I +   A+  +   +++ 
Sbjct: 527 FPAGLVIYWVVNNITSIAQQYFITRKVEADPNVGKGMKTK 566


>gi|213968445|ref|ZP_03396588.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato T1]
 gi|301384267|ref|ZP_07232685.1| putative inner membrane protein translocase component YidC
           [Pseudomonas syringae pv. tomato Max13]
 gi|302131966|ref|ZP_07257956.1| putative inner membrane protein translocase component YidC
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213926733|gb|EEB60285.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato T1]
 gi|330876349|gb|EGH10498.1| membrane protein insertase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 562

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 146/585 (24%), Positives = 241/585 (41%), Gaps = 53/585 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N    N           N+ +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASA 59

Query: 58  IDDRAQ------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
               A             A++    + +K   L  +I+  G     L L  Y        
Sbjct: 60  DVPSATGNTTSAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPD 119

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFK 161
               L   +  +  + A+     T       +   V++             +  ++L F 
Sbjct: 120 VPFQLF-DNGGERTFLAQSGLTGTNGPDARASGRPVYSSAQKSYQLADGQDSMVVELKFS 178

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQ 217
                  +R       Y   +   V N S      +   ++ R                 
Sbjct: 179 ENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATY 238

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
            G       +   +    DI+K  I        W+     Y+ + +IP    +   Q + 
Sbjct: 239 LGAALWTAAEPYKKVSMKDIDKGQIKEN-VQGGWVAWLQHYFVTAWIPDHNVTNAVQTR- 296

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337
             D    Y   F++  +++ PG    TT  L+AG K    +         P  E+ +D+G
Sbjct: 297 -KDSQGNYIIGFTSPTLSVAPGAQGETTATLYAGPKSQAVLKELS-----PGLELTVDYG 350

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+ 
Sbjct: 351 FLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLA 410

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
            L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR AP
Sbjct: 411 VLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAP 469

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           +  WI DL+  DP                     I PIIM  +MFIQ +++P P D  QA
Sbjct: 470 WILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQA 510

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            ++  MP++F F    FPAGL++YW  +N +SI QQA I +   A
Sbjct: 511 KVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 555


>gi|192360367|ref|YP_001984274.1| inner membrane protein, 60 kDa [Cellvibrio japonicus Ueda107]
 gi|254772765|sp|B3PIU1|OXAA_CELJU RecName: Full=Inner membrane protein oxaA
 gi|190686532|gb|ACE84210.1| inner membrane protein, 60 kDa [Cellvibrio japonicus Ueda107]
          Length = 552

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 142/571 (24%), Positives = 251/571 (43%), Gaps = 41/571 (7%)

Query: 1   MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N  +A   A+ +++   W +F       +  N              +    + + 
Sbjct: 1   MDWQKNLLLAAIAAVILMLFIRWNHFQEQLPQHQAGNTPAGSSIAAIAPDSNGDIPSAVP 60

Query: 59  DDRAQALSMS-----PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
                  + +       +++K  +L+ +IN  G     ++L  +   +++      LL  
Sbjct: 61  TASDTPQATADSSKVELIQVKTDNLLVTINPLGGDIASVSLPRHFAKLNTPDEPFVLLDN 120

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFER 170
            N  + Y ++   + T             +  +    K  +    + L  +     + +R
Sbjct: 121 RNN-HTYVSQSGLIGTNGTDTAQGRPLFNSSSTSYELKEGSDGLVVDLTLQQGAVNITKR 179

Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT---NTFGVQEGFIAVLGDK 227
                  YL  +   + N +         G+I R                 G      ++
Sbjct: 180 FSFKRGDYLIGVEYLIDNQAETPWSAQLYGQIKRDSQNFVKVSALEMNPYLGAAITTSEE 239

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
           +  +  + DI K +         W+ +   Y+ S +IP   +  + + + L D    Y  
Sbjct: 240 NYKKIHFEDIAKQTFE-TSRQGGWVAMVQHYFISAWIPDASSQVNYKLRKLGD-QDLYLL 297

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            F+   + + PG         +AG K+   +         P  ++ +D+GW ++IAKP+F
Sbjct: 298 GFTTQPVVVEPGSKGVIKASFYAGPKDTERLEEIS-----PYLDLTVDYGWLWWIAKPLF 352

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
             + + +  +GN+G+AI+  T+ VKLLFFPL+   Y S A M+ +QPK+ EL+E++    
Sbjct: 353 AFLKFIHGFLGNWGLAIIGLTLSVKLLFFPLSAASYRSMAKMRKLQPKLLELKERY-GED 411

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M++LYKT  +NP  GC P+L+Q+PVF A+Y V+  S+E+RHAPF+GWI+DL+ 
Sbjct: 412 RQKFSQEMMKLYKTEQVNPFGGCLPLLIQMPVFIALYWVLMESVELRHAPFFGWIEDLSR 471

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527
            DP                     + PII   +M+I  K++P P D  QA I+N +P VF
Sbjct: 472 MDPYF-------------------VLPIIYGATMWIMQKLNPQPTDPMQARIMNMLPFVF 512

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            F    FPAGL++YW  +N++SI QQ VI +
Sbjct: 513 TFMFLWFPAGLVLYWVTNNLLSIAQQYVITR 543


>gi|88658314|ref|YP_507580.1| putative inner membrane protein translocase component YidC
           [Ehrlichia chaffeensis str. Arkansas]
 gi|88599771|gb|ABD45240.1| inner-membrane protein, 60 kDa [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 579

 Score =  351 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 213/585 (36%), Positives = 324/585 (55%), Gaps = 19/585 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N  +A+ LSV+I+  W+  Y      +   E         P   DN         
Sbjct: 1   MVEVRNLILAVILSVLIMMGWRFIYDKFFTTQHAIEDNTSSDAMIPEIDDN--FIHKTRS 58

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                + + R++L N  + GSI+LKGAQFDDL  + YH+    NS  + LLSP  T+N Y
Sbjct: 59  EVIESNTNIRIKLSNEKMNGSISLKGAQFDDLIFKNYHVTPDKNSEGIVLLSPEETENVY 118

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
           F E  ++   + I +P  +++WN      L+P  PI L + N   ++F+  I+LD  Y+F
Sbjct: 119 FIEFGWIDPQHKITVPTHSSIWNSDQST-LSPNNPITLTWDNKQGVVFKIKITLDNDYMF 177

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
           KI   VTNN+   I   P GRI R K     + +   EG +   G  +L E  Y  I K 
Sbjct: 178 KIEQMVTNNTDSIINLIPYGRINRSKHTAEKSYWISHEGAVGSFG-NTLKEWTYKAITKE 236

Query: 241 SISNFHESNS------WLGISDKYWASVFIPSKETSFHSQFK---YLSDGHARYQAKFSA 291
                 + +       W+GI DKYW +  IP+     +  F       +   R+Q  FS 
Sbjct: 237 KNIKIQQQDINDNQNQWIGIGDKYWFTALIPNVSQKSNLNFHVKHAKHNSKDRFQVDFSH 296

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
           +     P  ++T+ N+LFAGAKE   +  Y+ +L I  F+  +D+G  YFI KP+F+L+ 
Sbjct: 297 DNYIAHPNNTVTSINYLFAGAKELKLLDTYKDNLNISLFDKAVDFGVLYFITKPVFLLLE 356

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           YF N++GNFG+AI+L T+ +KL+ FPL+ K YVS   ++++QP I  ++E +K    ++ 
Sbjct: 357 YFNNVIGNFGLAILLLTIVIKLIMFPLSHKSYVSMLKLRHLQPDIVRIKELYKNDNDKM- 415

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
            K +  ++K +N+NP++G  P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL++ D  
Sbjct: 416 SKEISAIFKKNNVNPMSGFVPVLIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLSSFDTA 475

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFV 528
           NI T+FG+L F  P  + +GI P+I+ ++M IQ K++       DK QA  + ++P +F+
Sbjct: 476 NILTIFGLLKFNPP--ICIGILPVILGITMIIQQKLNNHSSLNQDKTQANFMKFLPYIFI 533

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           F  SSFPAGLIIYW  SN I+IVQQ +I      +      ++  
Sbjct: 534 FIFSSFPAGLIIYWICSNSITIVQQLIIKHYVTKKFNFYKTVQQE 578


>gi|77920733|ref|YP_358548.1| inner-membrane protein [Pelobacter carbinolicus DSM 2380]
 gi|77546816|gb|ABA90378.1| protein translocase subunit yidC [Pelobacter carbinolicus DSM 2380]
          Length = 542

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 147/571 (25%), Positives = 256/571 (44%), Gaps = 38/571 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             N N  +A+ L V+I   +  F+V P    +N+E    ++             V   D 
Sbjct: 1   MENKNVIIALLLMVLIWTGYTTFFVKPAPAPVNDEPAVAESFPAVTPEVVGERVVPSVDH 60

Query: 62  AQALSMSPRV-----ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
             A + S  +      +            G +   L L+ Y   +  +S +VTL+   N 
Sbjct: 61  VMAAAASSDIAPRDFVVDTEDFRAVFTNVGGRLKKLELKNYRETLKEDSGLVTLVDADNA 120

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
            + +   L     A       +  V              ++     +N ++ E+  SL+ 
Sbjct: 121 LSTF-GILGQGDIALAENTVYATDVPAEGLTLGSDDKKDLRFTAVLSNGVVVEKVFSLNG 179

Query: 177 H-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             Y F +   V N     I+ S    +++   +    +     G      D+    +   
Sbjct: 180 KGYDFNLQVRVVNPGDRPIQGSLELLMVQPWSEDREGSRYSFVGPAIYADDELNTYK--V 237

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
              +        S  W    DKY+ +  +P +        + + +         S+  ++
Sbjct: 238 KELEDGAIRHDNSGIWTAFEDKYFMTAAVPLRSEQHAFVLEKVGNAVKNI---VSSGNLS 294

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY- 354
           +   +S+T    L+AG ++   +            +  ID+G+F  +A+P+  ++ + + 
Sbjct: 295 VGGQQSVTLDYLLYAGPRDLDVLEQVNH-----GLDKAIDFGFFDMLARPLLSVLKFCHK 349

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           NL+ N+G+AI+L TVF+K+LF+PL  K Y S  +M+ +QP++  LREK+K+   + + + 
Sbjct: 350 NLISNYGVAIILLTVFIKVLFWPLTHKSYKSMRDMQKLQPEMQRLREKYKKDK-ERMNRE 408

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           +++LY+ + +NP+ GC P+  QIPVFFA+YKV+  S+ +RH PF  WI+DLAA DP    
Sbjct: 409 IMELYRKNRVNPMGGCLPMFAQIPVFFALYKVLLGSIALRHEPFIFWIQDLAAKDPYY-- 466

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534
                            I P+IM ++MF Q KMSP   D  QA I+ +MPV+F F   +F
Sbjct: 467 -----------------ITPLIMGVTMFFQQKMSPTTMDSQQAKIMLFMPVIFTFMFLNF 509

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           P+GL+IYW  +NV++I QQ  I +  G  + 
Sbjct: 510 PSGLVIYWLVNNVLTIAQQWFINREGGQPVK 540


>gi|261346746|ref|ZP_05974390.1| membrane protein insertase, YidC/Oxa1 family [Providencia
           rustigianii DSM 4541]
 gi|282565146|gb|EFB70681.1| membrane protein insertase, YidC/Oxa1 family [Providencia
           rustigianii DSM 4541]
          Length = 550

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 147/574 (25%), Positives = 271/574 (47%), Gaps = 56/574 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      +++  E K +QT +Q   + NS    + + 
Sbjct: 1   MDSQRNLLL-IALLFVTFLVWQAW----ESDKVAQETKTVQTSQQKTDMPNSDGQAVTNS 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +K   L   IN +G   D+ +L  Y   ++S  P   L   +     Y
Sbjct: 56  -----EQGKLIAVKTDVLDVRINTRGGDIDEADLLAYPATLNSPDPFRLL--ETTPGFVY 108

Query: 121 FAELDYVST-------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
            A+   +          NN + P           +       + + F + N +++++T  
Sbjct: 109 QAQSGLIGPHGPDNPANNNGQRPLYTADSASFELQAGQDELRVPMSFTDNNGVVYQKTYI 168

Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVL--G 225
           L    Y  ++  ++ N +   +  +  G++ +      +  T +N F +     A     
Sbjct: 169 LKRGKYTVEVEYSIQNPTAQPLSLAFFGQLKQTIALPEQRDTGSNNFALHTYRGAAYSSD 228

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           + +  +  +SDIE  ++S       W+ +  +Y+A+ ++P       S F  +       
Sbjct: 229 ENNYKKYSFSDIEDKNLSLT-TKGGWVAMLQQYFATAWVPEATEQ--STFYTIDLDKKSA 285

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
              + +  +TI    + T ++ L+ G +    +         P  ++ +D+GW +FI++P
Sbjct: 286 IVGYKSEPVTIAANGAGTYSSTLWIGPEIQSEMAEVA-----PHLDLTVDYGWLWFISQP 340

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+ + +  VGN+GIAI++ T  V+ + +PL K QY S A M+ +QPK+  +RE+   
Sbjct: 341 LFKLLKFIHGFVGNWGIAIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGD 400

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q + + M+ +YK   +NPL GC P+L+Q+P+F A+Y ++  S+E+RHAPF+GWI+DL
Sbjct: 401 DK-QRMSQEMMAMYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFFGWIQDL 459

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524
           +A DP                     I P++M ++MF+  KMSP    D  Q  I+ +MP
Sbjct: 460 SAQDPYY-------------------ILPVLMGVTMFVIQKMSPTAVTDPMQQKIMTYMP 500

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           VVF      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 501 VVFTVFFLWFPSGLVLYYIVSNLVTIIQQQIIYR 534


>gi|212632922|ref|YP_002309447.1| inner membrane protein, 60 kDa [Shewanella piezotolerans WP3]
 gi|254778162|sp|B8CH68|OXAA_SHEPW RecName: Full=Inner membrane protein oxaA
 gi|212554406|gb|ACJ26860.1| Inner membrane protein, 60 kDa, putative [Shewanella piezotolerans
           WP3]
          Length = 542

 Score =  350 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 133/563 (23%), Positives = 239/563 (42%), Gaps = 36/563 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +      + +   + ++      +   +         
Sbjct: 1   MESQRN-ILLIGLLFVSFLLWQQWQADKAPQPVAQTQSSVAPSTVADAHSSDVPDADSAL 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                +    + +     +  I+  G       L  + L+   + P V L   ++    Y
Sbjct: 60  PETVTASKELITVTTDQFVLKIDPVGGDIVHSALLSHKLEQDGDDPFVLLEQTNDIY--Y 117

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPIKLVFKNANNILFERTISL-DE 176
            A+   +              ++  S +       T  + L +  AN + + +  +    
Sbjct: 118 IAQSGLIGRDGIDSSTTGRAHFDSASREYDLAGQDTLEVPLTYLAANGVTYTKLFTFYRG 177

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            +   +   + N S  Q++    G+I     ++ ++         A     +  E+   D
Sbjct: 178 KHNVDVDYQINNTSDAQLQVQMYGQIKHSIKKSESSMMMPTYRGAAFSTADTRYEKYSFD 237

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
                  N      W+ +   Y+ S ++P +           + G A     F      I
Sbjct: 238 DMADKNLNKSTLGGWVAMLQHYFVSAWVPPENDKNIIFSSVSAGGLAN--IGFRGALYDI 295

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
            PG   +     + G K+   +    +        +++D+G+ +++A P+  L+ ++ + 
Sbjct: 296 APGTEQSIKAQFYVGPKDQEALSALSES-----LNLVVDYGFLWWLAIPIHWLLMFYQSF 350

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           VGN+G+AI+L T+ V+ + +PL K QY S A M+N+QPK+ +++E+F     Q + +AM+
Sbjct: 351 VGNWGVAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLADMKERFGD-DRQKMGQAMM 409

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LYK   +NP+ GC PILLQ+P+F A+Y V+  S E+RHAPF  WI DL+  DP      
Sbjct: 410 ELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESYELRHAPFMLWITDLSVQDPYY---- 465

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSF 534
                          + PI+M +SMFI  KM P  P  D  Q  ++ WMPV+F      F
Sbjct: 466 ---------------VMPILMGVSMFIMQKMQPMAPTMDPMQVKMMQWMPVIFTVFFLWF 510

Query: 535 PAGLIIYWSWSNVISIVQQAVIM 557
           PAGL++YW   N+++I QQ +I 
Sbjct: 511 PAGLVLYWLVGNLVAITQQKIIY 533


>gi|297539958|ref|YP_003675727.1| membrane protein insertase [Methylotenera sp. 301]
 gi|297259305|gb|ADI31150.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Methylotenera sp. 301]
          Length = 542

 Score =  350 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 148/559 (26%), Positives = 247/559 (44%), Gaps = 32/559 (5%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
                  + +  S+ I+  W  +       E+  +  + QTV        + +  +  D 
Sbjct: 1   MDTKRLVLFVIFSMSILMLWDAWQRQHAPAEVVQQ--SSQTVAGATSSTAAVSGNVAVDS 58

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
              LS   R+ +        I   G     L L  +    +  +  V LL  S     Y 
Sbjct: 59  DFKLSAGQRISVTTDLYKADIETTGGDLRRLELLKHRASDNVKTNFV-LLDDSAKPMTYV 117

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181
           A+   +            +       +    T  ++L +      + +        Y   
Sbjct: 118 AQTGLIGADLPSHKAVFTSAAPTYQMQDGKDTLEVRLSWVGNGVTVDKVYTFHRNKYAID 177

Query: 182 IVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
           +   + N S   I      +I+  ++    +       G           +  + D+ K 
Sbjct: 178 VNYEIKNGSAAAITPVVYYQIVHDNESNQGSKLMPTFTGGTYYTEATKFKKLAFKDMAKE 237

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
            +     ++ W+G+   Y+ S +IP        +F         Y+    +   TI PG 
Sbjct: 238 PLKVT-SNDGWVGLLQHYFVSAWIPKDG--LAREFYTEKLNEHMYRIGSKSTLSTIAPGA 294

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
           S+T    LF+G +    +         P  E  +D+GW   +A P+F ++S  ++LV N+
Sbjct: 295 SLTVPARLFSGPQTKKDLVETA-----PGLEYTVDYGWLKMVASPLFWVLSLIHSLVHNW 349

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G+AI+L T+ +K  F+PL+ K Y S A M+ + P+++ +++KF     Q +Q+AM++LYK
Sbjct: 350 GVAIILLTLLIKAAFYPLSAKSYRSMAQMRELAPRLESMKQKFGD-DRQKMQQAMMELYK 408

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
           T  INP++GC PIL+QIPVF ++Y ++  S+E+RHAPF+GWI+DL+A DP          
Sbjct: 409 TEKINPMSGCLPILIQIPVFISLYWMLLGSIELRHAPFFGWIQDLSAVDPYY-------- 460

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
                      I PIIM +SM IQ K++P P D  QA ++ WMPV+F      FPAGL++
Sbjct: 461 -----------ILPIIMGISMIIQTKLNPKPTDPIQAKVMTWMPVIFSVFFFFFPAGLVL 509

Query: 541 YWSWSNVISIVQQAVIMKM 559
           YW  +N+ISI QQ  + K 
Sbjct: 510 YWVVNNIISIWQQWYVNKS 528


>gi|271502719|ref|YP_003335745.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Dickeya dadantii Ech586]
 gi|270346274|gb|ACZ79039.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Dickeya dadantii Ech586]
          Length = 543

 Score =  350 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 150/570 (26%), Positives = 252/570 (44%), Gaps = 52/570 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +      E   N     QT +Q N      A   +  
Sbjct: 1   MDSQRNLLV-IALLFVTFMIWQQW------ETDKNPPATTQTTQQANGAVGDAANQGVP- 52

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   ++ +L  Y  ++ SN P   L   S     Y
Sbjct: 53  ---ASGQGKLITVKTDVLSLNINTRGGDIEEADLLAYPAELGSNQPFKLL--ESTPAFTY 107

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N        S              I L + +AN + F +T  L 
Sbjct: 108 QAQSGLTGKNGPDNPANGARPLYTASADRFELAAGQNELRIPLTYTDANGVSFTKTFVLK 167

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
              Y   +  +V N S   +  +  G++ +         T +N F +     A       
Sbjct: 168 RGEYALNVEYSVNNTSAQPLELTLFGQLKQSIDLPSHRDTGSNNFALHTYRGAAFSSSDD 227

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
             +KYS  +     N +    W+ +  +Y+A+ ++P    +  + F   + G+      F
Sbjct: 228 KYRKYSFSDMKENLNINTQGGWVAMLQQYFATAWVP--NAAASNTFYSANLGNGLAAIGF 285

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            +  + + PG        L+ G +    +         P  ++ +D+GW +FI++P+F L
Sbjct: 286 KSPSVVVQPGSQQNLNATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKL 340

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + + +  +GN+G +I+  T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q
Sbjct: 341 LKFLHGFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK-Q 399

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + + M+ LYKT  +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A D
Sbjct: 400 RMSQEMMALYKTEKVNPLGGCFPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528
           P                     + PI+M L+MF   KMSP    D  Q  I+ +MPV+F 
Sbjct: 460 PYY-------------------VLPILMGLTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 500

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                FP+GL++Y+  SN+++I QQ +I +
Sbjct: 501 VFFLWFPSGLVLYYIVSNLVTIAQQQLIYR 530


>gi|311696590|gb|ADP99463.1| inner membrane protein translocase component YidC [marine bacterium
           HP15]
          Length = 571

 Score =  350 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 144/597 (24%), Positives = 250/597 (41%), Gaps = 64/597 (10%)

Query: 1   MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ------------- 45
           M+       A    +S ++V AW   Y  P       E +  QT                
Sbjct: 1   MDIQRIVLFAGLAIVSYLMVLAWNEDYHQPPETAQVAESQPSQTAGNMGNSDNMVLPEDS 60

Query: 46  --------PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97
                         +  AV+             + ++       I+          L  Y
Sbjct: 61  SAQVDGDGEFTTPETGQAVISSTETTTAVSDQFITVRTDVYDLQIDRVSGNLVKARLLDY 120

Query: 98  HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TP 152
              ++S  P+  L +  N    Y  E   +         N +                  
Sbjct: 121 DDTLNSEKPLTLLNNTQN--RLYVLESGLIGRDGPDSRKNGSAPVYSADAASYELAEGDN 178

Query: 153 TTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
              + L + + N +   +    + + Y   +   V N S ++ + +  G+I+R +    T
Sbjct: 179 QLQVDLTYTSDNGVQITKRYEFERNSYEISVKYLVENQSSEEWQANFTGKIVRDQSPDPT 238

Query: 212 NTFGV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267
           +   +      G +    +    +  + D++++ I+    +N WL     Y+ S ++P +
Sbjct: 239 SQTSMGIQAFLGLVISSPEDPYEKFDFGDLQENQINQ-SVTNGWLAFLQHYFLSAWVPER 297

Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327
           +     Q          Y   F     ++ PG++       + G K    +         
Sbjct: 298 DIPAQYQTTRRGPN---YVMGFVYPATSVAPGETAEIGARAYVGPKIIERLEGMA----- 349

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           P  +  +D+GW +FI+ P+F+++ +F++LVGN+G++I+L TV VK +FF L+   Y S A
Sbjct: 350 PNLDRTVDFGWLFFISLPLFIILDWFHSLVGNWGVSIILLTVLVKAVFFHLSATSYKSMA 409

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
            M+ + P++  L+E +     Q + + M+ LYK   INPL GC PIL+Q+PVF ++Y V+
Sbjct: 410 KMRAVAPQLTRLKELYGD-DRQRMSQEMMALYKREKINPLGGCLPILVQMPVFISLYWVL 468

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S+++RHAPF  WI+DL+  DP                     I PI+M  SMF+QM +
Sbjct: 469 FESVQLRHAPFMLWIQDLSVMDPYF-------------------ILPILMGASMFLQMSL 509

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           +P P D  QA I+  MP++F      FPAGL++YW  +N++SI QQ  I +   AE+
Sbjct: 510 NPTPPDPMQAKIMKMMPLIFTVFFLWFPAGLVLYWLVNNILSIAQQWYITRKIEAEM 566


>gi|170718320|ref|YP_001785332.1| inner membrane protein translocase component YidC [Haemophilus
           somnus 2336]
 gi|254772997|sp|B0URU3|OXAA_HAES2 RecName: Full=Inner membrane protein oxaA
 gi|168826449|gb|ACA31820.1| 60 kDa inner membrane insertion protein [Haemophilus somnus 2336]
          Length = 541

 Score =  350 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 147/570 (25%), Positives = 254/570 (44%), Gaps = 45/570 (7%)

Query: 2   ERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
             +    + +AL   S +I   WQ  Y  P+ E     + +           +       
Sbjct: 1   MDSKRSLLFMALLFISFLIYQQWQVDYNTPKPEVTEQAQVSEVNSTALTATSDIA----- 55

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                  +    + L+N      +N  G       L  Y  ++ S++P V L   +N   
Sbjct: 56  ---NDTQAKGRVITLENDVFRLKVNTLGGDVIGSELLNYDAELHSSAPFVLL--QNNADK 110

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISL 174
            Y A+   V   N I+       + +               + L+F+    I  +  +  
Sbjct: 111 VYIAQSGLVG-KNGIDSRAGRANYQVEGDVFKLAEGQQELKVPLIFEKDGVIYRKVFVLK 169

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
              Y  ++   +TN S   I   P  ++     +++ +         A    ++  ++  
Sbjct: 170 PGSYALEVNFEITNQSPKPIELVPYAQLTHTLVESSGSMAMPTYTGGAYSSSETNYKKYS 229

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
            +  + +  + H    W+ +   Y+ S +IP+++ +        +  H      + +  I
Sbjct: 230 FEDMEKADLDIHTKAGWVALLQHYFVSAWIPNQDANNTLYTLTNTKKH-LGSIGYRSAPI 288

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
            I  G + T    L+ G K    +            ++ +D+GW +FIAKP+F L++   
Sbjct: 289 VIENGATETIHTQLWTGPKLQDQMADVAN-----HLDLTVDYGWAWFIAKPLFKLLTLIQ 343

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           +LV N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + 
Sbjct: 344 SLVQNWGLAIIGVTLVVKAVLYPLTKAQYTSMAKMRMLQPKLQEMRERF-GEDRQRMSQE 402

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GW++DL+A DP    
Sbjct: 403 MMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFMEAVELRHAPFFGWVQDLSAQDPYF-- 460

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I PI+M  SMF+  KMSP P AD  Q  ++ +MP++F+     
Sbjct: 461 -----------------ILPILMGASMFLLQKMSPTPVADPMQQKVMTFMPLIFMVFFLF 503

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FPAGL++YW  SN+I+I QQ +I +    +
Sbjct: 504 FPAGLVLYWLASNLITIAQQWLIYRGLEKK 533


>gi|304313414|ref|YP_003813012.1| Preprotein translocase subunit [gamma proteobacterium HdN1]
 gi|301799147|emb|CBL47390.1| Preprotein translocase subunit [gamma proteobacterium HdN1]
          Length = 568

 Score =  350 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 137/590 (23%), Positives = 244/590 (41%), Gaps = 54/590 (9%)

Query: 1   MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA---- 54
           M+      + +   +S  ++Y W   Y   +      +     +      +  S      
Sbjct: 1   MDWQRTLLIGLLAIVSYAMIYTWNQDYGSKQHAASETKLPQSYSQGDTPVITESPKGSED 60

Query: 55  ------------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
                         L+ D   A      + ++   L   I+  G     + L+ Y + + 
Sbjct: 61  LPSVTNSEKQSLPALVSDAQSAKKAGGLIRVETDVLSVEISTLGGDVVSVRLKAYPISIE 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVF 160
                +++L+    +  Y A+                  +     +         + L F
Sbjct: 121 DKGTPISILA-ETAQTTYVAQSGLAGINGPDSNAAGRPQYTTDQTEYELKGDHLVVPLHF 179

Query: 161 KNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--- 216
            + N +   +T       Y+ K    V N S      +   +I R               
Sbjct: 180 VDENGVKVTKTFEFAKGSYVIKNRYDVHNTSSQPWTAAFFAQIKRDNSPDPGVQHTTGFG 239

Query: 217 ---QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273
                G      +K   ++K+  + K+ +     +  W+ I   Y+ + +IP +   +  
Sbjct: 240 LPTFLGVAYWSPEKPYNKEKFDALVKTPLDLKGVTGGWMAIIQHYFLAAWIPDQNQQYDY 299

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
               +        A+   + +T+ PG S      L+ G K   T+            +++
Sbjct: 300 STAAVKGNT---IARIVGHSVTVAPGASQDYQASLYVGPKIQKTLEALVPGKG---LDLV 353

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +FI+K +F L+S F+ L  N+G++I+L TV +K LFF  +   Y S A M+ +Q
Sbjct: 354 VDYGPLFFISKILFWLLSTFHALTANWGVSIILLTVTIKALFFYPSAISYRSMAKMRTVQ 413

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P +  LRE++     Q L + M++LY+ + INPL GC PIL+Q+PVF A+Y  +  S+E+
Sbjct: 414 PALLRLREQYAD-DRQKLSQEMMKLYRDNKINPLGGCLPILIQMPVFLALYWALLESVEL 472

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R APF+GW+ DL+  DP                     I P+IM  +M+IQ  ++P P D
Sbjct: 473 RQAPFFGWLTDLSVMDPYF-------------------ILPLIMGGTMYIQTALNPAPPD 513

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             QA ++ +MP++F      FPAGL++YW  +N +SI+QQ +I +   AE
Sbjct: 514 PMQAKLMKFMPIIFTVMFLWFPAGLVVYWITNNSLSILQQWIITRKIEAE 563


>gi|326797441|ref|YP_004315261.1| membrane protein oxaA [Marinomonas mediterranea MMB-1]
 gi|326548205|gb|ADZ93425.1| Membrane protein oxaA [Marinomonas mediterranea MMB-1]
          Length = 553

 Score =  350 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 146/583 (25%), Positives = 249/583 (42%), Gaps = 53/583 (9%)

Query: 1   MERNWNYFVAIALS---VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN------ 51
           M+    YF+  AL     ++   W   Y           +         N   +      
Sbjct: 1   MDF-RRYFLWGALFVSGYLLFLQWNQDYGPQSQTSQPVAQNQTTVNTATNAESDLPNSVS 59

Query: 52  ----SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
                 +   +   A+AL+    +++K  +L  SI+  G      +L  Y   + ++ P 
Sbjct: 60  NTTLPASDTDVPANAKALASGQLIDVKTDTLDISIDPVGGDLVGASLLQYKKTLDASDPF 119

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP---TTPIKLVFKNAN 164
           V L   +NT   Y ++   +            T     +  +L     T  + L F +  
Sbjct: 120 VIL--ENNTTRTYVSQSGLIGQDGIDNSKGRPTYHADKTQYVLADGENTLDVNLYFTDEK 177

Query: 165 NILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEG 219
            + + +T       Y  +   TV N S D  R     +I R   +      +       G
Sbjct: 178 GVEYTKTYRFTRGVYSVEQSITVNNTSADDWRGKQFAQIKRDSTEDPSTATSLGLQPYLG 237

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                 +    +  +SD+ +   +    ++ W+ +   Y+ S +IP +  +   Q +  +
Sbjct: 238 GAISTDEVRYEKVSFSDM-EEKPAKITTNSGWIALLQHYFVSAWIPKQGETVTLQTRSNN 296

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
                    F+  E+ +  G+  T +   + G K    +     +      +  +D+G  
Sbjct: 297 G---INFIGFTGPEVEVPAGQKGTLSATFYVGPKLQDQLAATAAN-----LDKTVDYGML 348

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +++A+P+F L++   ++V N+G+AI+L  V VK +FF L+   Y S A M+   P++  L
Sbjct: 349 WWLAEPLFWLLTAIQSVVINWGVAIILIVVCVKAVFFKLSAASYRSMAKMRKFGPELTRL 408

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           RE++     Q + +AM+ LYK   INPL GC PIL+Q+PVF ++Y V+  S+E+RHAPF 
Sbjct: 409 REQYGD-DRQKMSQAMMTLYKKEKINPLGGCLPILVQMPVFLSLYWVLMESVELRHAPFM 467

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            WI DL+  DP                     + PI+M LSM  Q  ++P P D  QA I
Sbjct: 468 LWINDLSYMDPYY-------------------VLPILMGLSMLGQQMLNPTPPDPMQARI 508

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           +  MP+ F F    FP+GL++YW  +N +SI+QQ VI K   A
Sbjct: 509 MKIMPIAFTFFFLWFPSGLVLYWVVNNTLSIIQQYVITKRIEA 551


>gi|226942148|ref|YP_002797222.1| inner membrane protein translocase component YidC [Laribacter
           hongkongensis HLHK9]
 gi|254772999|sp|C1D6H8|OXAA_LARHH RecName: Full=Inner membrane protein oxaA
 gi|226717075|gb|ACO76213.1| YidC [Laribacter hongkongensis HLHK9]
          Length = 550

 Score =  350 bits (896), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 134/570 (23%), Positives = 234/570 (41%), Gaps = 45/570 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
                  V I LS  +++ WQ ++      +             P     + +       
Sbjct: 1   MDTKRLIVFIVLSFGLLFVWQEYFAPKPQPKPVAAAVQPDGTPAPATARPADSPATGK-- 58

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
              L+ +  + +    +   IN  G     L L       + + P   +L        Y 
Sbjct: 59  ---LTSAQTITVTTDLVKAQINTAGGDIRSLELLTQGAIDNPDKPF--MLMTEQGGRTYV 113

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFERTISLD-EHY 178
           A+   +S+  ++    +    +  +  +L       + L     N +  ++  +   + Y
Sbjct: 114 AQSGLLSSDASLPTHKTLYAADKTAYTLLPDQNTLTVTLAAAPVNGVEVKKIFTFKRDSY 173

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           +  +   + N+S   +  +   R++R    P+  ++      G           +  + D
Sbjct: 174 VIDVRYDIINHSDKPVDATAYYRLLRDGKAPEGESSMAHTFTGPAVYTETGKFQKVSFED 233

Query: 237 IEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHS-------QFKYLSDGHARYQAK 288
           + K       +  N W+ +   Y+ S +I                QF+        Y A 
Sbjct: 234 LAKGKGDYVRQADNGWVAMVQHYFVSAWILKTNDGKSVCSSAEACQFELKPAAGDLYSAG 293

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                  +  G+  +    L+AG ++   +         P   +  D+GW   IA P+F 
Sbjct: 294 VLVKLPVVAAGQQYSIDMPLYAGPEDTRRMATVA-----PGLVLTKDYGWVTIIATPLFW 348

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+   Y LV N+G AI+L TV VK  F+PL+   Y S A MK + P++  L+E++     
Sbjct: 349 LLDKLYGLVHNWGWAIVLLTVLVKAAFYPLSAASYRSMAKMKALAPRMQRLKEQYGD-DR 407

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q  Q+A +++YKT  +NPL GC PI++QIPVF  +Y  +  S+E+R AP+  WI DLA  
Sbjct: 408 QKFQQATMEMYKTEKVNPLGGCLPIVVQIPVFIGLYWALLASVELRQAPWILWIHDLAKP 467

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP                     I P +M+ +M++Q  ++PPPAD  QA ++  MP+ F 
Sbjct: 468 DPYY-------------------ILPALMAATMYLQTFLNPPPADPLQAKMMKIMPLAFS 508

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                FPAGL++YW  +N++SI QQ  + K
Sbjct: 509 VMFFFFPAGLVLYWLVNNILSIAQQWWVNK 538


>gi|15603030|ref|NP_246102.1| putative inner membrane protein translocase component YidC
           [Pasteurella multocida subsp. multocida str. Pm70]
 gi|38503177|sp|Q9CLQ2|OXAA_PASMU RecName: Full=Inner membrane protein oxaA
 gi|12721513|gb|AAK03249.1| YidC [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 541

 Score =  349 bits (895), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 147/571 (25%), Positives = 255/571 (44%), Gaps = 45/571 (7%)

Query: 1   MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   +      + +S ++   WQ  Y  P+       + +           +  A    
Sbjct: 1   MDSRRSLLVIALLFISFLVYQQWQLDYHTPKPVATEQVKVSSDVPASSASSSSDIATT-- 58

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                A +    + L+N      ++  G       L  Y  +++SN+P   L + +N  +
Sbjct: 59  -----AQAQGRIITLENDVFRLEVDTLGGDVVHSELLKYDAELNSNTPFTLLTNKAN--H 111

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL---VFKNANNILFERTISLD 175
            Y A+   V     I+       + +            +L        + + F +   L 
Sbjct: 112 VYIAQSGLVGKDG-IDTKAGRANYQVDGDTFKLADGQNELAVPFVFEKDGVTFRKIFVLK 170

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGDKSLVEQK 233
              Y   +   + N S   I   P G++     +   N       G      + +  +  
Sbjct: 171 RGAYDIAVNFEIDNQSDKTIEVEPYGQLRHTLVEDTGNVAMPTYTGGAYSSSETNYKKYS 230

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
           ++D+EK+++S       W+ +   Y+ S +IP+++      +      +      +    
Sbjct: 231 FADMEKANLS-ISTKAGWVAVLQHYFVSAWIPNQDADNQL-YSLTDKANNLASIGYRGPV 288

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
             I  G   T  + L+ G K    +            ++ +D+GW +FIAKP+F L+++ 
Sbjct: 289 TAIPAGAKETIRSSLWTGPKLQDQMATVAN-----HLDLSVDYGWAWFIAKPLFWLLTFI 343

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
            ++V N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + +
Sbjct: 344 QSIVQNWGLAIIGVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERF-GEDRQRMSQ 402

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            M++LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP   
Sbjct: 403 EMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY- 461

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532
                             I PI+M  SMF+  KMSP P AD  Q  I+N+MP++F+    
Sbjct: 462 ------------------ILPILMGASMFLLQKMSPTPVADPTQQKIMNFMPLIFMVFFL 503

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            FP+GL++YW  SN+I+I QQ +I +    +
Sbjct: 504 WFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534


>gi|74318843|ref|YP_316583.1| protein translocase subunit yidC [Thiobacillus denitrificans ATCC
           25259]
 gi|123611090|sp|Q3SF38|OXAA_THIDA RecName: Full=Inner membrane protein oxaA
 gi|74058338|gb|AAZ98778.1| preprotein translocase subunit YidC [Thiobacillus denitrificans
           ATCC 25259]
          Length = 546

 Score =  349 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 145/563 (25%), Positives = 236/563 (41%), Gaps = 35/563 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+      + I  S  ++  W+ +                           +  A     
Sbjct: 1   MDNQR-LILFIVFSFSLLLLWEAWQDKQAPAPATRPVAGAPAGSAAPTPSTALNAPAAAP 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                +   R  ++   L  +I+  G    +L L GY      N   V  L   +    Y
Sbjct: 60  AQTGFAKGARAVVETDVLRATIDANGGDLRELQLLGYRETEDKN--RVFTLFEDSRTRPY 117

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA--NNILFERTISLDEHY 178
            A+  +V                            + LV+ +A     + +  I     +
Sbjct: 118 LAQSGFVGGGLPTHRSTFELTPGTYRLTGGAARLEVPLVWNDAARGVRVEKTFIFTRGSH 177

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
              +   V N   + +  +P  +  RH   P+  +       G       K   +  ++D
Sbjct: 178 EVAVRTRVVNRGKEPLDLTPYYQFTRHGEAPRGESFFLYTYTGPAFYTDAKKFQKVPFTD 237

Query: 237 IEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           I+  S       +N W+G+   ++ + ++P +        + L +G   Y A     E  
Sbjct: 238 IQDGSAEFEKTATNGWVGLVQHHFVAAWLPEESVKREYYARSLGEG--LYSAGVILAEGQ 295

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           + PG+  T T  L+AG +    +     + A P  ++  D+GW   +A P+F  +     
Sbjct: 296 LAPGQQKTFTVPLYAGPQSQAVL-----EKAAPGLDLARDYGWLTPLAYPIFWSLEKIER 350

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           LVGN+G AI++ T+ +KL  +PL+   Y S A MK + P++ +L+E +     + L +AM
Sbjct: 351 LVGNWGWAIIILTILIKLALYPLSAAGYKSMAKMKKLTPRLQQLKETYGDDRAK-LHQAM 409

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
            ++YKT  INPL GC PIL+QIPVF A+Y V+  ++EMR AP+ GWI DL A DP     
Sbjct: 410 AEMYKTEKINPLGGCLPILIQIPVFIALYWVLLAAVEMRGAPWLGWITDLTAPDPWY--- 466

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
                           I PIIM ++  +Q+K++P P D  QA I+  MPV F      FP
Sbjct: 467 ----------------ILPIIMGVTSILQVKLNPQPMDPMQAKIMMIMPVAFTVMFVFFP 510

Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558
           AGL++YW  +N++SI QQ  I K
Sbjct: 511 AGLVLYWVVNNILSIAQQWAINK 533


>gi|268593484|ref|ZP_06127705.1| membrane protein insertase, YidC/Oxa1 family [Providencia rettgeri
           DSM 1131]
 gi|291310905|gb|EFE51358.1| membrane protein insertase, YidC/Oxa1 family [Providencia rettgeri
           DSM 1131]
          Length = 549

 Score =  349 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 143/572 (25%), Positives = 260/572 (45%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      +++  + K +QT +Q +   +   AV    
Sbjct: 1   MDSQRNLLL-IALLFVSFLVWQAW----ESDKVAQDVKTVQTSQQADMPSSDAQAVTG-- 53

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL-SPSNTKNA 119
                     + +K   L   IN +G   D+ +L  Y   + S SP   L  +P     A
Sbjct: 54  ----SGQGKLITVKTDVLDIRINTRGGDIDEADLLAYPATLHSESPFRLLETNPGFVYQA 109

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISL 174
               +      N         +++  S           L            +  +  I  
Sbjct: 110 QSGLIGLHGPDNPANNNGERPLYSADSTTFTLEKGQDVLRVPMTFTDNNGVVYQKTYIVK 169

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVL--GDK 227
              Y  ++  ++ N +   +  +  G++ +      +  T ++ F +     A     + 
Sbjct: 170 RGQYTVEVEYSIQNPTAQPLSLAFFGQLKQTIELPKERDTGSSNFALHTYRGAAYSSDEN 229

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
           +  +  + DIE  ++        W+ +  +Y+A+ +IP+      S F  +         
Sbjct: 230 NYKKYSFGDIEDKNLDLT-TKGGWVAMLQQYFATAWIPASAE--KSTFYTIDLDKKSAII 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  +TI    + T ++ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSEPMTIAANGAGTYSSTLWVGPEIQSEMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + +  VGN+GIAI++ T  V+ + +PL K QY S A M+ +QPK+  +RE+     
Sbjct: 342 KLLKFIHGFVGNWGIAIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ +YK   +NPL GC P+L+Q+P+F A+Y ++  S+E+RHAPF+GWI+DL+A
Sbjct: 402 -QRMSQEMMAMYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFFGWIQDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I P++M ++MF+  KMSP    D  Q  I+ +MPVV
Sbjct: 461 QDPYY-------------------ILPVLMGVTMFVIQKMSPTAVTDPMQQKIMTYMPVV 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ VI +
Sbjct: 502 FTIFFLWFPSGLVLYYIVSNLVTIIQQQVIYR 533


>gi|237801668|ref|ZP_04590129.1| membrane protein insertase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331024527|gb|EGI04583.1| membrane protein insertase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 562

 Score =  349 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 143/585 (24%), Positives = 237/585 (40%), Gaps = 53/585 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N                 + +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTPAPGIPDTAAGTNGSASA 59

Query: 58  IDDR------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
                             A++    + +K   L  +I+  G     L L  Y        
Sbjct: 60  DVPSATANTTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPD 119

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFK 161
               L   +  +  + A+     T           V++             +  ++L F 
Sbjct: 120 VPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYSSAQKTYQLADGQDSMVVELKFS 178

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQ 217
                  +R       Y   +   V N S      +   ++ R                 
Sbjct: 179 ENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATY 238

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
            G       +   +    DI+K  I        W+     Y+ + +IP    +   Q + 
Sbjct: 239 LGAALWTAAEPYKKVSMKDIDKGQIKET-VQGGWVAWLQHYFVTAWIPDHNATNSVQTR- 296

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337
             D    Y   F++  +T+ PG    T+  L+AG K    +         P  E+ +D+G
Sbjct: 297 -KDSQGNYIIGFTSPTLTVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDYG 350

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+ 
Sbjct: 351 FLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLA 410

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
            L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR AP
Sbjct: 411 VLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAP 469

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           +  WI DL+  DP                     I PIIM  +MFIQ +++P P D  QA
Sbjct: 470 WILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQA 510

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            ++  MP++F F    FPAGL++YW  +N +SI QQA I +   A
Sbjct: 511 KVMKLMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 555


>gi|289677544|ref|ZP_06498434.1| putative inner membrane protein translocase component YidC
           [Pseudomonas syringae pv. syringae FF5]
 gi|302185836|ref|ZP_07262509.1| putative inner membrane protein translocase component YidC
           [Pseudomonas syringae pv. syringae 642]
 gi|330898611|gb|EGH30030.1| membrane protein insertase [Pseudomonas syringae pv. japonica str.
           M301072PT]
 gi|330937304|gb|EGH41312.1| membrane protein insertase [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330976398|gb|EGH76455.1| membrane protein insertase [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 563

 Score =  349 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 141/586 (24%), Positives = 233/586 (39%), Gaps = 54/586 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N                 + +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59

Query: 58  IDDR-------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                              A++    + +K   L  +I+  G     L L  Y       
Sbjct: 60  DVPSANATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160
                L   +  +  + A+     T           V+                   L F
Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216
                   +R       Y   +   V N S      +   ++ R                
Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWSGNLFAQLKRDASSDPSSTTATGTAT 238

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
             G       +   +    DI+K  +        W+     Y+ + +IP    +   Q +
Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQVKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
              D    Y   F++  +++ PG    T+  L+AG K    +         P  E+ +D+
Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+
Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
             L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR A
Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+  WI DL+  DP                     I PIIM  +MFIQ +++P P D  Q
Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           A ++  MP++F F    FPAGL++YW  +N +SI QQA I +   A
Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556


>gi|113460279|ref|YP_718337.1| putative inner membrane protein translocase component YidC
           [Haemophilus somnus 129PT]
 gi|123131891|sp|Q0I0Z1|OXAA_HAES1 RecName: Full=Inner membrane protein oxaA
 gi|112822322|gb|ABI24411.1| protein translocase subunit yidC [Haemophilus somnus 129PT]
          Length = 541

 Score =  349 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 147/570 (25%), Positives = 253/570 (44%), Gaps = 45/570 (7%)

Query: 2   ERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
             +    + +AL   S +I   WQ  Y  P+ E     + +           +       
Sbjct: 1   MDSKRSLLFMALLFISFLIYQQWQVDYNTPKPEMTEQAQVSEVNSTALTATSDIA----- 55

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                  +    + L+N      +N  G       L  Y  ++ S++P V L   +N   
Sbjct: 56  ---NDTQAKGRVITLENDVFRLKVNTLGGDVIGSELLNYDAELHSSAPFVLL--QNNADK 110

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISL 174
            Y A+   V   N I+       + +            +L     F+    I  +  +  
Sbjct: 111 VYIAQSGLVG-KNGIDSRAGRANYQVEGDVFKLAEGQQELKVPLVFEKDGVIYRKVFVLK 169

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
              Y  ++   +TN S   I   P  ++     +++ +         A    ++  ++  
Sbjct: 170 PGSYALEVNFEITNQSPKPIEVVPYAQLTHTLVESSGSMAMPTYTGGAYSSSETNYKKYS 229

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
            +  + +  + H    W+ +   Y+ S +IP+++ +        +  H      + +  I
Sbjct: 230 FEDMEKADLDIHTKAGWVALLQHYFVSAWIPNQDANNTLYTLTNTKKH-LGSIGYRSAPI 288

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
            I  G + T    L+ G K    +            ++ +D+GW +FIAKP+F L++   
Sbjct: 289 VIENGATETIHTQLWTGPKLQDQMADVAN-----HLDLTVDYGWAWFIAKPLFKLLTLIQ 343

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           +LV N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + 
Sbjct: 344 SLVQNWGLAIIGVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERF-GEDRQRMSQE 402

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GW++DL+A DP    
Sbjct: 403 MMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFMEAVELRHAPFFGWVQDLSAQDPYF-- 460

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I PI+M  SMF+  KMSP P AD  Q  ++ +MP++F+     
Sbjct: 461 -----------------ILPILMGASMFLLQKMSPTPVADPMQQKVMTFMPLIFMVFFLF 503

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FPAGL++YW  SN+I+I QQ +I +    +
Sbjct: 504 FPAGLVLYWLASNLITIAQQWLIYRGLEKK 533


>gi|66048358|ref|YP_238199.1| putative inner membrane protein translocase component YidC
           [Pseudomonas syringae pv. syringae B728a]
 gi|81307749|sp|Q4ZL11|OXAA_PSEU2 RecName: Full=Inner membrane protein oxaA
 gi|63259065|gb|AAY40161.1| 60 kDa inner membrane protein [Pseudomonas syringae pv. syringae
           B728a]
 gi|330970321|gb|EGH70387.1| membrane protein insertase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 563

 Score =  349 bits (894), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 141/586 (24%), Positives = 233/586 (39%), Gaps = 54/586 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N                 + +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59

Query: 58  IDDR-------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                              A++    + +K   L  +I+  G     L L  Y       
Sbjct: 60  DVPSANATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160
                L   +  +  + A+     T           V+                   L F
Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216
                   +R       Y   +   V N S      +   ++ R                
Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWSGNLFAQLKRDASSDPSSTTATGTAT 238

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
             G       +   +    DI+K  +        W+     Y+ + +IP    +   Q +
Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQVKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
              D    Y   F++  +++ PG    T+  L+AG K    +         P  E+ +D+
Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+
Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
             L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR A
Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+  WI DL+  DP                     I PIIM  +MFIQ +++P P D  Q
Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           A ++  MP++F F    FPAGL++YW  +N +SI QQA I +   A
Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556


>gi|289628218|ref|ZP_06461172.1| putative inner membrane protein translocase component YidC
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289649108|ref|ZP_06480451.1| putative inner membrane protein translocase component YidC
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298484605|ref|ZP_07002710.1| integral membrane protein [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298160862|gb|EFI01878.1| integral membrane protein [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|330870071|gb|EGH04780.1| membrane protein insertase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 563

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 141/586 (24%), Positives = 233/586 (39%), Gaps = 54/586 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N                 + +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59

Query: 58  IDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                              A++    + +K   L  +I+  G     L L  Y       
Sbjct: 60  DVPSASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160
                L   +  +  + A+     T           V+                   L F
Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216
                   +R       Y   +   V N S      +   ++ R                
Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTAT 238

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
             G       +   +    DI+K  +        W+     Y+ + +IP    +   Q +
Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQVKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
              D    Y   F++  +++ PG    T+  L+AG K    +         P  E+ +D+
Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+
Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
             L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR A
Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+  WI DL+  DP                     I PIIM  +MFIQ +++P P D  Q
Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           A ++  MP++F F    FPAGL++YW  +N +SI QQA I +   A
Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556


>gi|319945014|ref|ZP_08019276.1| YidC/Oxa1 family membrane protein insertase [Lautropia mirabilis
           ATCC 51599]
 gi|319741584|gb|EFV94009.1| YidC/Oxa1 family membrane protein insertase [Lautropia mirabilis
           ATCC 51599]
          Length = 561

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 153/586 (26%), Positives = 262/586 (44%), Gaps = 53/586 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE-----------------MNNERKNIQTV 43
           M+++    + +   + +++ W N+  Y                         +  +    
Sbjct: 1   MQQSHKTVLWVVFILSLLFLWNNWQQYNGQPAMFGGSQQAQTAQQNTASAPQDGADTSIP 60

Query: 44  KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY-HLDVS 102
             P+Q  N   A +  D+A+       + LKN  +   I+  G Q     L  + H   +
Sbjct: 61  GAPSQAGNDAPASVPADQAEQAKAGQTITLKNDVIELGIDTVGGQIVSSKLLKHIHDTRN 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
            +S  + + S           +         + PN  T   ++            ++   
Sbjct: 121 PDSGNLVIQSDRKGSF----FVGQTGLVGVKDAPNHTTPMTVVRTIETDGQVTGVVLAAE 176

Query: 163 ANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEG 219
              +  ERT  L    Y  K+ + VTN     +  S   ++ R  H+    +  +    G
Sbjct: 177 GGGLRIERTYQLSPGSYEIKVDNRVTNIGEQPLSPSLYLQLTRDTHEAPGQSGYYKTYVG 236

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
                      +  + DIEK    +    ++ W+GI   Y+ S ++P +        + +
Sbjct: 237 PAIYTDADKFQKVSFDDIEKGKAKHSGRANDGWVGIIQHYFVSAWVPKQGQPREYYTRRV 296

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
             G + Y A        I  G+S+  +  LF G ++   +         P  ++++D+GW
Sbjct: 297 --GPSTYSAGAYEQLGQISAGQSVDASETLFIGPQDQDVLAKVA-----PGLDLVVDYGW 349

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              IAKP+F L+++ + +VGN+G AI+  T+ VKL FFPL    Y S A M+ +QP+++ 
Sbjct: 350 LTAIAKPLFWLLTFLHGIVGNWGWAIVALTILVKLAFFPLQAASYRSMAKMRKVQPRLNA 409

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +RE++       L +AM++LYKT  INPL GC PIL+QIPVF A+Y V+  S+E+R+AP+
Sbjct: 410 IRERYGD-DRMNLNQAMMELYKTEKINPLGGCLPILVQIPVFIALYWVLLASVEIRNAPW 468

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
            GWI DL++ DP                     I PI+M+ +MF+Q  ++P PAD  QA 
Sbjct: 469 IGWIHDLSSPDPLY-------------------ILPILMAGTMFLQTHLNPKPADPVQAK 509

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           ++ +MP++F      FP+GL++YW  SN+ SI QQ VI +    + 
Sbjct: 510 MMTFMPLIFSVMFFFFPSGLVLYWVVSNIFSIAQQWVITRQIEGKP 555


>gi|258541762|ref|YP_003187195.1| translocase inner membrane component YidC [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256632840|dbj|BAH98815.1| translocase inner membrane component YidC [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256635897|dbj|BAI01866.1| translocase inner membrane component YidC [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256638952|dbj|BAI04914.1| translocase inner membrane component YidC [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256642006|dbj|BAI07961.1| translocase inner membrane component YidC [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256645061|dbj|BAI11009.1| translocase inner membrane component YidC [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256648116|dbj|BAI14057.1| translocase inner membrane component YidC [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256651169|dbj|BAI17103.1| translocase inner membrane component YidC [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256654160|dbj|BAI20087.1| translocase inner membrane component YidC [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 583

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 171/581 (29%), Positives = 298/581 (51%), Gaps = 18/581 (3%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
                  +A ALS +++  +   +   +         +      P     +  A      
Sbjct: 1   MDPKRLILATALSALVLIGYDYLFPQHQPVPPPQPGVHAVAPPAPASSGAAAPAENTQAE 60

Query: 62  AQAL---SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           A A        RV +  P++ G++NL+GA+ DDL L+ Y   V  +SP V +L+ ++T  
Sbjct: 61  AAAPVKDGPETRVAINAPAVQGTLNLRGARLDDLVLKHYRETVKPDSPDVRVLNSASTHA 120

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            Y        +  ++ LP++NT+W   SG  +    P+ L + N   + F+  +S+D++Y
Sbjct: 121 DYVDFGWRAPSDVSVRLPDANTLWK-ASGTQMDAEHPLTLSWDNGQGLTFDIRMSVDQNY 179

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI----AVLGDKSLVEQKY 234
           +F I   V N++   +   P  R+ R      T    V EG I      L + S    + 
Sbjct: 180 MFTISQQVHNSTGQAVALYPFYRVNRGYTPEGTGGMLVHEGPISVIDGRLNEGSYKTVRT 239

Query: 235 SDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
             +   +I+  H+ +  W GI+DKYW    +P +  +    + + +   A      +   
Sbjct: 240 GGVPPDNIAWSHQGTGGWAGITDKYWLMAVLPDQNANVIGTYGFQAAQGAYQVGFTATAP 299

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
           + +  G++ +T   +FAGAKE   +  YEKDL +P F   +D+GW  F+ +P+F ++ + 
Sbjct: 300 VQVAAGQTASTEAHVFAGAKEVRLLEQYEKDLHVPMFWKAVDFGWLSFLTRPVFFVLDWL 359

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
              +G+FG+A++  TV VK+ F PL  KQ   T     ++P++D +R + K   P  +Q+
Sbjct: 360 NEHLGSFGLALLTFTVIVKVAFLPLTIKQMRMTWKTARLKPQVDLIRSRLKD-DPMAMQQ 418

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            ++ LY+  N+N   G  P+L+Q PVF+ +YK + +++EMRHAPF GW+KDL+A DPTN+
Sbjct: 419 QIMALYRQENVNLFGGFLPLLIQAPVFWCLYKDLYVTIEMRHAPFVGWVKDLSAPDPTNL 478

Query: 474 FTLFGILPFYL---PGFMHVGIWPIIMSLSMFIQMKM--SPPPADKGQAMILNWMPVVFV 528
           F LFG++PF       F+ +G WPI+   ++F+  K+  S    D  Q  ++ ++P++F 
Sbjct: 479 FNLFGLVPFDPTHITPFLALGAWPIMYGATLFLMQKVSSSSANMDPSQQKVMMFIPLLFT 538

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG---AEIGL 566
           F ++  P GL+IY+ WSN+++ VQQ +I+       A+  L
Sbjct: 539 FFMARQPVGLVIYYCWSNILTAVQQVIIISRLKAADAKPQL 579


>gi|330952338|gb|EGH52598.1| membrane protein insertase [Pseudomonas syringae Cit 7]
          Length = 563

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 141/586 (24%), Positives = 234/586 (39%), Gaps = 54/586 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N    +            + +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASSTAPGIPDTAAGTNGSASA 59

Query: 58  IDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                              A++    + +K   L  +I+  G     L L  Y       
Sbjct: 60  DVPSASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160
                L   +  +  + A+     T           V+                   L F
Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216
                   +R       Y   +   V N S      +   ++ R                
Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWSGNLFAQLKRDASSDPSSTTATGTAT 238

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
             G       +   +    DI+K  +        W+     Y+ + +IP    +   Q +
Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQVKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
              D    Y   F++  +++ PG    T+  L+AG K    +         P  E+ +D+
Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+
Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
             L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR A
Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+  WI DL+  DP                     I PIIM  +MFIQ +++P P D  Q
Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           A ++  MP++F F    FPAGL++YW  +N +SI QQA I +   A
Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556


>gi|253991870|ref|YP_003043226.1| inner membrane protein translocase component YidC [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253783320|emb|CAQ86485.1| similar to 60 kda inner-membrane protein yidc of escherichia coli
           [Photorhabdus asymbiotica]
          Length = 546

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 134/571 (23%), Positives = 246/571 (43%), Gaps = 54/571 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      E   N +       Q   + +     +   
Sbjct: 1   MDSQRNLLL-IALLFVSFLVWQAW------EADKNPQPTTVQATQQTDMPSGENQAVPGS 53

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +K   L  +IN +G   ++ +L  Y   + SN P   L   +     Y
Sbjct: 54  -----GKGKLITVKTDVLSLTINTRGGDIEEADLLAYPDTLGSNQPFKLL--ETTPAFTY 106

Query: 121 FAELDYVSTANNIELPNSNTV-WNLISGKILTPTTPIKLVFK-----NANNILFERTISL 174
            A+             NS    +       +      +L            +  +  +  
Sbjct: 107 QAQSGLTGKDGPDNPTNSERPLYTTAQDSYVLDNGQDELRIPLNFVAKDGVVYVKTFVLK 166

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQTATNTFGVQEGFIAVLGDKS 228
              Y   +   + N +   ++ +  G++ +      H+   ++N         A   D +
Sbjct: 167 RGEYAISVDYRIHNTTEKPLQMTFFGQLKQNVELPKHRDTGSSNFALHTYRGAAYSSDDN 226

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             ++      +S   +      W+ +  +Y+A+ +IPS      S F   S         
Sbjct: 227 KYKKHSFSDIESEPLSVTTKGGWVAMLQQYFATAWIPSANE--TSTFYTASLDKKMAAIG 284

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
           + +  I++      T ++ L+ G +    +         P  ++ +D+GW +FI++P+F 
Sbjct: 285 YKSAPISVAANSEKTVSSTLWIGPEIQDEMAAVA-----PHLDLSVDYGWLWFISQPLFK 339

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+ + +  +GN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      
Sbjct: 340 LLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGD-DR 398

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q + + M+ LYK   +NPL GC P+L+Q+P+F A+Y ++  S+E+RHAPF GWI DL+A 
Sbjct: 399 QRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFAGWINDLSAQ 458

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527
           DP                     I P++M ++MF+  KMSP    D  Q  I+ +MPV+F
Sbjct: 459 DPYY-------------------ILPLLMGVTMFVIQKMSPTTITDPMQQKIMTYMPVMF 499

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                 FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 500 TIFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 530


>gi|270264115|ref|ZP_06192382.1| putative inner membrane protein translocase component YidC
           [Serratia odorifera 4Rx13]
 gi|270041764|gb|EFA14861.1| putative inner membrane protein translocase component YidC
           [Serratia odorifera 4Rx13]
          Length = 545

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 142/572 (24%), Positives = 247/572 (43%), Gaps = 56/572 (9%)

Query: 1   MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N F+   L  S +I  AWQ       + +   +  N  T    +Q          
Sbjct: 1   MDSQRNLFLIALLFVSFMIWQAWQTDNAPQPVAQTTQQTSNTATGDAASQAVP------- 53

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                A      + +    L  +IN +G   +   L  Y   + S++P   L   +    
Sbjct: 54  -----ASGQGKLITVNTDVLSLTINTRGGDIEQAKLLAYPDTLGSSTPFQLL--ENTPSF 106

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTIS 173
            Y A+             N        +    T         I L F   +  ++ +T  
Sbjct: 107 VYQAQSGLTGRNGPDNPANGERPLFQAAQDNYTLPEGQDELRIPLTFTGKDGAVYTKTFV 166

Query: 174 LDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227
           L  ++    +   V N S   +  +  G++ +         T +N F +     A     
Sbjct: 167 LKRNHYAVGVDYNVDNKSTAPLELTLFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSSS 226

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
               QKY+  +K    N      W+ +  +Y+A+ ++P+  T   + F     G      
Sbjct: 227 EDKYQKYA-FDKDENLNVTTQGGWVAMLQQYFATAWVPA--TQGSNTFYTAKPGDNLSTI 283

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            F +  + + PG        L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 284 GFKSTPVVVQPGAQQQLNATLWVGPELQDQMAQLA-----PHLDLTVDYGWLWFISQPLF 338

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + +  +GN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+     
Sbjct: 339 KLLKFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK 398

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK+  +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 399 -QRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 457

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 458 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 498

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 499 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 530


>gi|307133251|ref|YP_003885267.1| cytoplasmic insertase into membrane protein, Sec system [Dickeya
           dadantii 3937]
 gi|306530780|gb|ADN00711.1| cytoplasmic insertase into membrane protein, Sec system [Dickeya
           dadantii 3937]
          Length = 543

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 147/570 (25%), Positives = 249/570 (43%), Gaps = 52/570 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      E   N     QT +Q N      A   +  
Sbjct: 1   MDSQRNLLL-IALLFVTFMIWQQW------ETDKNPPAATQTTQQANGAVGDAANQGVP- 52

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   ++ +L  Y  ++ S+ P   L   +     Y
Sbjct: 53  ---ASGQGKLITVKTDVLSLNINTRGGDIEEADLLAYPAELGSSQPFKLL--ETTPAFTY 107

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N +                     I L + +AN + F +T  L 
Sbjct: 108 QAQSGLTGKNGPDNPANGSRPLYTAPADRFELAAGQNELRIPLTYTDANGVSFTKTFVLK 167

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
              Y   +   V N S   +  +  G++ +         T +N F +     A       
Sbjct: 168 RGEYALNVEYGVNNASAQPLELTLFGQLKQSIDLPSHRDTGSNNFALHTYRGAAFSSSDD 227

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
             +KYS  +     N      W+ +  +Y+A+ ++P+   +    F   + G+      F
Sbjct: 228 KYRKYSFSDMKENLNITTQGGWVAMLQQYFATAWVPAAAGNNT--FYSANLGNGLAAIGF 285

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            A  + + PG        L+ G +    +         P  ++ +D+GW +FI++P+F L
Sbjct: 286 KAPPVIVQPGSQQNLNATLWVGPEIQDKMATVA-----PHLDLTVDYGWLWFISQPLFKL 340

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + + +  +GN+G +I+  T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q
Sbjct: 341 LKFLHGFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK-Q 399

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+RHAPF  WI DL+A D
Sbjct: 400 RMSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528
           P                     + PI+M L+MF   KMSP    D  Q  I+ +MPV+F 
Sbjct: 460 PYY-------------------VLPILMGLTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 500

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                FP+GL++Y+  SN+++I QQ +I +
Sbjct: 501 VFFLWFPSGLVLYYIVSNLVTIAQQQLIYR 530


>gi|71736510|ref|YP_277293.1| inner membrane protein translocase component YidC [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|123634467|sp|Q48BF2|OXAA_PSE14 RecName: Full=Inner membrane protein oxaA
 gi|71557063|gb|AAZ36274.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 563

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 142/586 (24%), Positives = 233/586 (39%), Gaps = 54/586 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N                 + +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59

Query: 58  IDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                              A++    + +K   L  +I+  G     L L  Y       
Sbjct: 60  DVPSASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160
                L   +  +  + A+     T           V+                   L F
Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216
                   +R       Y   +   V N S      +   ++ R                
Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTAT 238

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
             G       +   +    DI+K  I        W+     Y+ + +IP    +   Q +
Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQIKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
              D    Y   F++  +++ PG    T+  L+AG K    +         P  E+ +D+
Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+
Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
             L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR A
Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+  WI DL+  DP                     I PIIM  +MFIQ +++P P D  Q
Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           A ++  MP++F F    FPAGL++YW  +N +SI QQA I +   A
Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556


>gi|257485603|ref|ZP_05639644.1| putative inner membrane protein translocase component YidC
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|331011891|gb|EGH91947.1| membrane protein insertase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 563

 Score =  348 bits (892), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 141/586 (24%), Positives = 233/586 (39%), Gaps = 54/586 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N                 + +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59

Query: 58  IDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                              A++    + +K   L  +I+  G     L L  Y       
Sbjct: 60  DVPSASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160
                L   +  +  + A+     T           V+                   L F
Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216
                   +R       Y   +   V N S      +   ++ R                
Sbjct: 179 SENGINYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTAT 238

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
             G       +   +    DI+K  +        W+     Y+ + +IP    +   Q +
Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQVKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
              D    Y   F++  +++ PG    T+  L+AG K    +         P  E+ +D+
Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+
Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
             L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR A
Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+  WI DL+  DP                     I PIIM  +MFIQ +++P P D  Q
Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           A ++  MP++F F    FPAGL++YW  +N +SI QQA I +   A
Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556


>gi|261868618|ref|YP_003256540.1| putative inner membrane protein translocase component YidC
           [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413950|gb|ACX83321.1| putative inner membrane protein translocase component YidC
           [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 543

 Score =  348 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 144/569 (25%), Positives = 247/569 (43%), Gaps = 40/569 (7%)

Query: 1   MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+          + +S I+   WQ  Y  P+         +   V   +   N+  A   
Sbjct: 1   MDSRRGLLVIALLFMSFIVYQQWQLDYHTPKPVTTEQTAASASDVPASSNAGNAVIAT-- 58

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                  +    + L+N      IN  G       L  Y  ++ SN+P + L   +  ++
Sbjct: 59  ----DTQAKGKIITLENDVFCLKINTLGGDVVSSELLKYDAELDSNTPFMLL--QNTPQH 112

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT---PIKLVFKNANNILFERTISLD 175
            Y A+   +                      L        + LV+        +      
Sbjct: 113 VYIAQSGLIGKDGIDTKSGRADYQADGDNFKLADGQNELSVPLVYVKDGVTYRKVFTLKR 172

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             Y   +   + N S   I   P G++     +++ N         A    ++  ++   
Sbjct: 173 GEYNIAVNYEINNQSDKTIEVEPYGQLRHTLVESSGNVAMPTYTGGAYSSSETNYKKYSF 232

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
              +++  + +    W+ +   Y+ S +IP+++                    +     +
Sbjct: 233 SDMENANLSINTKAGWVAVLQHYFVSAWIPNQDADNQLYTLIDKAN-NIGSIGYRGPVTS 291

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I P  + T T+ L+ G K    +            ++ +D+GW +FIAKP+F L+++   
Sbjct: 292 IQPNTTETLTSKLWTGPKLQNEMAQVAN-----HLDLTVDYGWAWFIAKPLFWLLTFIQK 346

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           LV N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M
Sbjct: 347 LVHNWGVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKLREMRERF-GEDRQRMSQEM 405

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NPL GC P+LLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP     
Sbjct: 406 MKLYKDEKVNPLGGCLPLLLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY--- 462

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534
                           I PI+M  SMF+  KMSP P AD  Q  ++ +MP++F+     F
Sbjct: 463 ----------------ILPILMGASMFLLQKMSPTPVADPMQQKVMTFMPLIFMVFFLWF 506

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           PAGL++YW  SN+I+I+QQ +I +    +
Sbjct: 507 PAGLVLYWLVSNLITIIQQQLIYRGLEKK 535


>gi|330987015|gb|EGH85118.1| membrane protein insertase [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 563

 Score =  348 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 141/586 (24%), Positives = 234/586 (39%), Gaps = 54/586 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N                 + +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59

Query: 58  IDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                              A++    + +K   L  +I+  G     L L  Y       
Sbjct: 60  DVPSASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160
                L   +  +  + A+     T           V+                   L F
Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216
                   +R       Y   +   V N S  +   +   ++ R                
Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQRWAGNLFAQLKRDASSDPSSTTATGTAT 238

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
             G       +   +    DI+K  +        W+     Y+ + +IP    +   Q +
Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQVKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
              D    Y   F++  +++ PG    T+  L+AG K    +         P  E+ +D+
Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+
Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
             L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR A
Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+  WI DL+  DP                     I PIIM  +MFIQ +++P P D  Q
Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           A ++  MP++F F    FPAGL++YW  +N +SI QQA I +   A
Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556


>gi|71909810|ref|YP_287397.1| protein translocase subunit yidC [Dechloromonas aromatica RCB]
 gi|123746663|sp|Q477Q4|OXAA_DECAR RecName: Full=Inner membrane protein oxaA
 gi|71849431|gb|AAZ48927.1| protein translocase subunit yidC [Dechloromonas aromatica RCB]
          Length = 547

 Score =  348 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 150/567 (26%), Positives = 241/567 (42%), Gaps = 36/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
                  + +  +      W+N+  Y  P+  +             P+    + AA    
Sbjct: 1   MDTRRLILVLIFTFSSFMLWENWQKYNQPKPADAVAAAPVSGAAPTPSAALQAKAAPGTP 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A  +S +    +    L  +I+ +G     L L  Y            L      K+ 
Sbjct: 61  PVATPVSTAETFSITTDLLKATISAQGGDLVSLELLNYKEH-DDIQKNFDLFD---AKHQ 116

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178
           Y A+   +             V         T    ++L   + N I   + ++     Y
Sbjct: 117 YLAQAGLIGEGLPTHRTTFKHVGGATKLADGTDELKVRLESADQNGIKVAKILTFKRGSY 176

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           L  I   V N S   I      ++ R    P   T       G           +  +  
Sbjct: 177 LIDIAWEVANGSDKAIAPHAYYQLQRDDLAPAGETKMVSTFTGPAVFTDADKYQKVTFEH 236

Query: 237 IEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           I  +         N WL +   Y+ S ++P  +T      + + +G   +QA        
Sbjct: 237 IADNKAKFTKTADNGWLAMVQHYFVSAWVPKDKTQREFYMRKV-EGSNVFQAGVIVPVAE 295

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I PG     +  L+AG +    +         P  ++++D+GW   +A P+F  +   + 
Sbjct: 296 IAPGAKGEASVSLYAGPQMQSALKQVA-----PGLDLVVDYGWLTVVAAPIFWALEAIHK 350

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           LVGN+G AI++ T+ +K +FFPL+   Y S A MK + P++ +L+E+F     Q L + M
Sbjct: 351 LVGNWGWAIVVLTIMIKAVFFPLSAASYKSMAKMKMLTPRLAQLKERFGDDK-QRLNQEM 409

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LY+T  +NPL GC PIL+QIPVF A+Y V+  ++EMR AP+  WIKDLA+ADP     
Sbjct: 410 MKLYQTEKVNPLGGCLPILVQIPVFIALYWVLLGAVEMRGAPWILWIKDLASADPYY--- 466

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
                           I P+IM +SMF+Q K++P P D  QA ++  MP++F F    FP
Sbjct: 467 ----------------ILPVIMMVSMFVQTKLNPTPPDPIQAKVMMMMPLIFGFMFFWFP 510

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGA 562
           AGL++YW  +NV+SI QQ  I ++  A
Sbjct: 511 AGLVLYWVVNNVLSIAQQWQITRLIDA 537


>gi|258544268|ref|ZP_05704502.1| YidC/Oxa1 family membrane protein insertase [Cardiobacterium
           hominis ATCC 15826]
 gi|258520506|gb|EEV89365.1| YidC/Oxa1 family membrane protein insertase [Cardiobacterium
           hominis ATCC 15826]
          Length = 557

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 137/572 (23%), Positives = 244/572 (42%), Gaps = 38/572 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYV---YPRIEEMNNERKN-----IQTVKQPNQVDNS 52
           M+ N    + IA + I    WQ + +    P     +                P     +
Sbjct: 1   MKNNPKLLLYIAAAFIAFLLWQKWQIANLPPTPTTASVPAATDVPQGTPGSDVPAATSGT 60

Query: 53  YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
            + +  D +A   +    + +K   L   I  KG       L  Y  + + + P+  L  
Sbjct: 61  RSDIPGDTQADTTANGAVIHVKTDVLELDIANKGGTIVHTTLPAYPENKNGDKPLALLHQ 120

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVW-NLISGKILTPTTPIKLVFKNANNILFERT 171
            +  +    + L            ++ +      +      +  + L ++     + +  
Sbjct: 121 DNPGRFLLQSGLTAADGGKAPSHHDTFSAAATTYTLADGQDSLVVPLSWQENGITVHKTY 180

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
                 Y F +   V N+S    R +   + +  +P  +     V     AV+      +
Sbjct: 181 TFKRGAYDFTLEQKVENHSDKAWRGNAYQQWVFGQPLPSKGLGQVATFTGAVMS---YDD 237

Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
             Y  I+  S  N +    W+ +   Y+    IP++     + F   +       A    
Sbjct: 238 DPYEKIKLGSKFNTNTETGWVAMIQHYFLGAIIPAQGQP-QAFFTNTNASSGDNFAGVVG 296

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
               + PG S + T+ ++ G K    +         P  +  +D+G+ + I +PMF +++
Sbjct: 297 ASSEVAPGGSTSFTSQIYIGPKIQKDLKAVA-----PNLDKTVDYGFLFMIGQPMFYVIN 351

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           + + ++ N+G AI++TT+ +KLLFF  +   Y S A M+ + P++  ++E++     Q  
Sbjct: 352 FIHGILHNWGWAIIVTTLLIKLLFFTPSAWAYKSMAKMRRLGPEMQRIKERYGD-DRQAA 410

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
             AM++LYK   +NP +GC P+LLQIP F A Y V+  S+E+RHAP+ GWI+DL+A DP 
Sbjct: 411 SMAMMKLYKDEKVNPASGCLPMLLQIPFFIAFYWVLVESVELRHAPWLGWIQDLSAMDPY 470

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531
                               I PII +  MF+Q K++PPP D  QA ++  +P+VF    
Sbjct: 471 Y-------------------ILPIINAALMFLQQKLNPPPPDPTQAKVMMMLPLVFGIMF 511

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             FP+GL++YW+ SN   IVQQ ++ K +G  
Sbjct: 512 MWFPSGLVLYWTVSNAFGIVQQYIMNKRYGER 543


>gi|37528712|ref|NP_932057.1| putative inner membrane protein translocase component YidC
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36788151|emb|CAE17278.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 546

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 139/571 (24%), Positives = 250/571 (43%), Gaps = 54/571 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      E   N +       Q   + +S    +   
Sbjct: 1   MDSQRNLLL-IALLFVSFLVWQAW------EADKNPQPTTVQATQQTDMPSSENQAVPGS 53

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +K   L  +IN +G   ++ +L  Y   + SN P   L   +     Y
Sbjct: 54  -----GKGKLITVKTDVLSLTINTRGGDIEEADLLAYPDTLGSNQPFKLL--ETTPAFTY 106

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             NS       +              I + F   N I++ +T  L 
Sbjct: 107 QAQSGLTGKDGPDNPMNSERPLYTAAQDSYVLADGQDELRIPMNFVTKNGIVYVKTFVLK 166

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
              Y   +   + N +   ++ +  G++ +         T ++ F +     A       
Sbjct: 167 RGEYAISVDYRIHNTTEKPLQMTFFGQLKQSVELPKHRDTGSSNFALHTYRGAAYSSDDT 226

Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             +KY     +    +      W+ +  +Y+A+ ++P       S F  ++ G       
Sbjct: 227 KYKKYSFSDIEGESLSVTTKGGWIAMLQQYFATAWVPVANE--TSTFYTVALGKEMAAIG 284

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
           + +  I++      T ++ L+ G +    +         P  ++ +D+GW +FI++P+F 
Sbjct: 285 YKSAPISVAANSEKTVSSTLWIGPEIQDEMAAVA-----PHLDLSVDYGWLWFISQPLFK 339

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+ + +  +GN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      
Sbjct: 340 LLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK- 398

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q + + M+ LYK   +NPL GC P+L+Q+P+F A+Y ++  S+E+RHAPF GWI DL+A 
Sbjct: 399 QRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFAGWIHDLSAQ 458

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527
           DP                     I P++M ++MFI  KMSP    D  Q  I+ +MPV+F
Sbjct: 459 DPYY-------------------ILPLLMGVTMFIIQKMSPTTITDPMQQKIMTYMPVIF 499

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                 FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 500 TIFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 530


>gi|90581131|ref|ZP_01236930.1| putative inner membrane protein translocase component YidC [Vibrio
           angustum S14]
 gi|90437652|gb|EAS62844.1| putative inner membrane protein translocase component YidC [Vibrio
           angustum S14]
          Length = 544

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 144/568 (25%), Positives = 239/568 (42%), Gaps = 38/568 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N  + IAL  +    +Q +      +  +       T        ++    L D 
Sbjct: 1   MGSQRN-ILLIALLFVSFLLFQQWNADKTPKPQSQGVAQQSTQSSDIPSHSAEGQPLTDQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                S    + +K   L  +++  G    D  L  Y+  + S  P V L       + Y
Sbjct: 60  T----SSQNLITIKTDVLELTVDTLGGDVVDAKLLKYNNTLDSKDPFVLLNDTDG--HDY 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176
            A+   +              +++ +   +      +L     F        +  +    
Sbjct: 114 IAQSGLIGPNGADSQQGGRAQYSVTAKDFVMSPEQNELRVPMTFTKDGINYTKTFVLKRN 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            Y   +  TV NN+          ++      +  +         A   + +  ++   D
Sbjct: 174 DYAVNVDYTVANNTDKAASVQMYAQLRHKLSDSGGSLTMPTYLGGAYSANDTKYKKYSFD 233

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
             K    +   +  W+ I   Y+ S +IP       SQ    +     Y         T+
Sbjct: 234 DMKDKNLDVAANEGWVAIMQHYFVSAWIPRDGADQTSQVYSTTSNGNGY-IGVRMPIETV 292

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
            PG+S      L+ G K    +    K+       + +D+GW +FIA P+  L+S+ ++L
Sbjct: 293 APGQSKEIKATLWVGPKLQNEMAATAKN-----LNLTVDYGWLWFIANPLHKLLSFIHSL 347

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           VGN+GIAI++ T  V+   +PL K QY S A M+ +QPKI  +RE+      Q   + M+
Sbjct: 348 VGNWGIAIIILTFIVRGAMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD-DRQRQSQEMM 406

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RHAPF+GWI DL+A DP      
Sbjct: 407 ELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHAPFFGWIHDLSAQDPYY---- 462

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535
                          + PI+M ++MF   KMSP    D  Q  I+ +MPV+F F    FP
Sbjct: 463 ---------------VLPILMGITMFFIQKMSPSTVTDPMQQKIMTFMPVMFTFFFLFFP 507

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           +GL++YW  SN+++++QQ +I +    +
Sbjct: 508 SGLVLYWLVSNIVTLIQQTIIFRALEKK 535


>gi|73666922|ref|YP_302938.1| putative inner membrane protein translocase component YidC
           [Ehrlichia canis str. Jake]
 gi|72394063|gb|AAZ68340.1| protein translocase subunit yidC [Ehrlichia canis str. Jake]
          Length = 579

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 215/587 (36%), Positives = 327/587 (55%), Gaps = 23/587 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N  +A+ LSV+I+  W+  Y      +   E            +     +     
Sbjct: 1   MVEVRNLILAVILSVLIMTGWRFIYDKFFTTQHIIE----DNTNSDTMIPEIDDSFTHKT 56

Query: 61  RAQALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           RA+ +  +  +   L N  + GSI+LKGAQFDDL  + YH+   SNS  + LLSP  T+ 
Sbjct: 57  RAEIIGSNTDIRLNLSNKKIHGSISLKGAQFDDLIFKNYHVTPDSNSDGIILLSPEETEG 116

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            YF E  ++   + I LPN +++WN      L+P  P  L + N   I+F+  I+LD  Y
Sbjct: 117 VYFIEFGWIDPQHKITLPNHSSIWN-SDQPTLSPNNPATLTWDNKEGIIFKIRITLDNDY 175

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
           +FKI   VTNN+   +   P GRI R K  T  + +   EG +    + +L E  Y  I 
Sbjct: 176 MFKIEQMVTNNTNSIVNLIPYGRINRSKHTTEKSYWISHEGAVGSFSN-TLKEWTYKTIT 234

Query: 239 KSSISNFH------ESNSWLGISDKYWASVFIPSKETSFHSQFK---YLSDGHARYQAKF 289
           K             + N W+GI DKYW +  IP+        F       +   R+Q  F
Sbjct: 235 KEKNIRIQSQDRNDDQNQWIGIGDKYWFTALIPNVLQKSKVNFHVKHAKHNSEDRFQVDF 294

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
           S +     P K++T+T++LFAGAKE   +  Y+ +L I  F+  +D+G  YFI KP+F+L
Sbjct: 295 SHDNYIAHPNKTVTSTSYLFAGAKELKLLDKYKDNLNIALFDKAVDFGVLYFITKPVFLL 354

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + YFY+ +GNFG+AI+L TV +KL+ FPL+ K YVS   +K +QP I +++E  K    +
Sbjct: 355 LEYFYDAIGNFGLAILLLTVVIKLIMFPLSYKAYVSMLKLKYLQPDILKIKELHKNDNDK 414

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
           +  K +  ++K +N+NP++G  PIL+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL++ D
Sbjct: 415 M-SKEISAIFKKNNVNPMSGFVPILIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLSSFD 473

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVV 526
             N+ T+FG+L F +P  + +GI P+I+ ++M IQ K++       DK QA  + ++P +
Sbjct: 474 TANVLTMFGLLKFNVP--ICIGILPVILGITMVIQQKLNNSNSLNQDKVQANFMKFLPYI 531

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           F+F  SSFPAGLIIYW  SN I+I+QQ +I +    +      ++  
Sbjct: 532 FIFIFSSFPAGLIIYWICSNSITIIQQLIIKQYASKKFNFQKVVKQE 578


>gi|317494663|ref|ZP_07953075.1| membrane protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917265|gb|EFV38612.1| membrane protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 544

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 139/572 (24%), Positives = 242/572 (42%), Gaps = 57/572 (9%)

Query: 1   MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N  +   L  S +I  AWQ         +   +  N  T    +Q          
Sbjct: 1   MDSQRNLLLIALLFVSFMIWQAWQTDNNPQPTAQTAGQTANTTTADASSQAVPES----- 55

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                       + +K   L  +IN +G   +  NL  Y   + S+ P   L   +    
Sbjct: 56  -------GQGKLITVKTDVLSLTINTRGGDIEQANLLAYPATLGSDKPFELL--ETTPDF 106

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTIS 173
            Y A+             N +                     I L +   + +++ +T  
Sbjct: 107 IYQAQSGLTGKNGPDNPANGDRPLYTADQTNFELVNGQDELRIPLTYTAKDGVVYTKTFV 166

Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227
           L    Y   +   V N+S   +  +  G++ +         T ++ F +     A     
Sbjct: 167 LKRGDYAIGVDYKVKNSSAQPLDLTLFGQLKQSIDLPKHRDTGSSNFALHTFRGAAYSSS 226

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
               QKY         N      W+ +  +Y+A+ +IP   ++    F   + G+     
Sbjct: 227 DDKYQKY--AFDKDPLNITTKGGWVAMLQQYFATAWIPQTNSTNQ--FYTANLGNGLSAI 282

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            F    + + PG        L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 283 GFKGEPVVVAPGTEKNLNATLWVGPEIQSDMAAVA-----PHLDLTVDYGWLWFISQPLF 337

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+     
Sbjct: 338 KLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERIGDDK 397

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK+  +NPL GC P+++Q+P+F A+Y ++  S+E+R APF  WI DLAA
Sbjct: 398 -QRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRQAPFALWIHDLAA 456

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 457 QDPYY-------------------ILPILMGITMFFIQKMSPTTVTDPMQQKIMTFMPVI 497

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 498 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 529


>gi|330890254|gb|EGH22915.1| membrane protein insertase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 563

 Score =  346 bits (888), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 141/586 (24%), Positives = 233/586 (39%), Gaps = 54/586 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N                 + +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59

Query: 58  IDDRAQ-------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
               A              A++    + +K   L  +I+  G     L L  Y       
Sbjct: 60  DVPSASATANTAAAPLETLAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160
                L   +  +  + A+     T           V+                   L F
Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216
                   +R       Y   +   V N S      +   ++ R                
Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTAT 238

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
             G       +   +    DI+K  +        W+     Y+ + +IP    +   Q +
Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQVKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
              D    Y   F++  +++ P     T+  L+AG K    +         P  E+ +D+
Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPAAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+
Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
             L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR A
Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+  WI DL+  DP                     I PIIM  +MFIQ +++P P D  Q
Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           A ++  MP++F F    FPAGL++YW  +N +SI QQA I +   A
Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556


>gi|291615646|ref|YP_003518388.1| YidC [Pantoea ananatis LMG 20103]
 gi|291150676|gb|ADD75260.1| YidC [Pantoea ananatis LMG 20103]
 gi|327395912|dbj|BAK13334.1| preprotein translocase subunit YidC [Pantoea ananatis AJ13355]
          Length = 548

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 141/574 (24%), Positives = 248/574 (43%), Gaps = 57/574 (9%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N F+   + +S +I  AWQ  +    ++    +  N        Q          
Sbjct: 1   MDSQRNLFLIAFLFVSFMIWQAWQTDHAPKPLQTQTTQNTNSAAGDAAGQGVP------- 53

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                A      + +K   L  +IN +G   D   L  Y   + S+ P   L   +    
Sbjct: 54  -----ASGQGKTITVKTDVLSLTINTRGGDVDQAQLLTYPDKLGSDKPFELL--ETTPSF 106

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTIS 173
            Y A+             N        +              + + F   N +++ +T  
Sbjct: 107 VYQAQSGLTGRNGPDNPNNGARPLYNTAQDHFELAEGQSELRVPMTFTAENGVVYTKTFV 166

Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGF--IAVLG 225
                Y   +   + N S   +  S  G++ +         T +N F +           
Sbjct: 167 FKRGDYAVNVDYNINNTSQQPLELSMFGQLKQTIDLPKHRDTGSNNFALHTFRGTAYSTS 226

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           +    + K+  I  +   N   SN W+ +  +Y+A+ ++P   T   +     + G+   
Sbjct: 227 ESKYEKIKFDTIADNENLNTTTSNGWVAMLQQYFATAWVPR--TQGTNTLYTSNLGNGVA 284

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
              + +  +T+ PG   T    L+ G +    +         P  ++ +D+GW +FI++P
Sbjct: 285 AIGYKSAPVTVAPGAQQTLDATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQP 339

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+   
Sbjct: 340 LFKLLKFIHSFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q   + M+ LYK   +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF  WI DL
Sbjct: 400 DK-QKQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFILWIHDL 458

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524
           +A DP                     I PI+M ++MF   KMSP    D  Q  I+ +MP
Sbjct: 459 SAQDPYY-------------------ILPILMGITMFFIQKMSPTTVTDPMQQKIMTYMP 499

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           V+F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533


>gi|320321684|gb|EFW77783.1| putative inner membrane protein translocase component YidC
           [Pseudomonas syringae pv. glycinea str. B076]
          Length = 563

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 142/586 (24%), Positives = 234/586 (39%), Gaps = 54/586 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N                 + +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59

Query: 58  IDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                              A++    + +K   L  +I+  G     L L  Y       
Sbjct: 60  DVPSASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160
                L   +  +  + A+     T           V+                   L F
Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216
                   +R     + Y   +   V N S      +   ++ R                
Sbjct: 179 SENGVNYIKRFTFKRDLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTAT 238

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
             G       +   +    DI+K  I        W+     Y+ + +IP    +   Q +
Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQIKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
              D    Y   F++  +++ PG    T+  L+AG K    +         P  E+ +D+
Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+
Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
             L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR A
Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+  WI DL+  DP                     I PIIM  +MFIQ +++P P D  Q
Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           A ++  MP++F F    FPAGL++YW  +N +SI QQA I +   A
Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVLNNTLSIAQQAYITRKIEA 556


>gi|254237758|ref|ZP_04931081.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126169689|gb|EAZ55200.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
          Length = 565

 Score =  346 bits (887), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 136/586 (23%), Positives = 236/586 (40%), Gaps = 67/586 (11%)

Query: 15  VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS------ 68
           ++++      Y  P +   +      Q +        + + V     + A S +      
Sbjct: 4   LLVLIDRNKDYGQPELPAASASMNTTQGLPDTPSASGTSSDVPTAQSSAAGSEAADKPVA 63

Query: 69  ---PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD 125
                +++K   L  +I+ +G     L L  Y   +        L   +  +  Y A+  
Sbjct: 64  VSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFPLF-DNGRERTYLAQSG 122

Query: 126 YVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANNILFERTIS-------- 173
                          +++             +L     F +      +R           
Sbjct: 123 LTGADGPDASSAGRPLFHSAQSSYQLADGQNELVVDLSFSHDGVNYIKRFTFHRGLKADC 182

Query: 174 -------------LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT----FGV 216
                         +  Y   +   + N S      +   ++ R      ++T       
Sbjct: 183 SDKEKAQKKIECINENAYQVGVSYLIDNQSGKTWSGNLFAQLKRDGSADPSSTTATGVST 242

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
             G      D    +    D++K           W+     Y+ + ++P+K        +
Sbjct: 243 YLGAAVWTPDSPYKKISTKDMDKEQFKE-SVQGGWVAWLQHYFVTAWVPTKGEQHQVMTR 301

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
              DG   Y   F+   +++  G  + T   L+AG K    +         P  E+ +D+
Sbjct: 302 --KDGQGNYIVGFTGPTLSVPAGSKVETDLTLYAGPKLQKHLKELS-----PGLELTVDY 354

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           G+ +FIA+P+F L+ + ++L+GN+G +I+  TV +KL FFPL+   Y S A M+ + PK+
Sbjct: 355 GFLWFIAQPIFWLLQHIHSLIGNWGWSIIALTVLIKLAFFPLSAASYRSMARMRAVSPKM 414

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
             ++E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR A
Sbjct: 415 QAIKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 473

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+ GWI DL+  DP                     I PI+M  +M IQ  ++P P D  Q
Sbjct: 474 PWLGWITDLSVKDPFF-------------------ILPIVMGGTMLIQQMLNPTPPDPMQ 514

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           A ++  MP++F F    FPAGL++YW  +N +SI QQ  I +   A
Sbjct: 515 AKVMKLMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKIEA 560


>gi|320331114|gb|EFW87085.1| putative inner membrane protein translocase component YidC
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330881912|gb|EGH16061.1| membrane protein insertase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 563

 Score =  346 bits (887), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 142/586 (24%), Positives = 233/586 (39%), Gaps = 54/586 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +AL+++       W   Y    +   N                 + +A  
Sbjct: 1   MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59

Query: 58  IDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                              A++    + +K   L  +I+  G     L L  Y       
Sbjct: 60  DVPSASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160
                L   +  +  + A+     T           V+                   L F
Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216
                   +R       Y   +   V N S      +   ++ R                
Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTAT 238

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
             G       +   +    DI+K  I        W+     Y+ + +IP    +   Q +
Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQIKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
              D    Y   F++  +++ PG    T+  L+AG K    +         P  E+ +D+
Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+   Y S A M+ + PK+
Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
             L+E+      Q + +AM++LYK   INPL GC PIL+Q+PVF ++Y V+  S+EMR A
Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+  WI DL+  DP                     I PIIM  +MFIQ +++P P D  Q
Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           A ++  MP++F F    FPAGL++YW  +N +SI QQA I +   A
Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVLNNTLSIAQQAYITRKIEA 556


>gi|227113120|ref|ZP_03826776.1| putative inner membrane protein translocase component YidC
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
 gi|227328549|ref|ZP_03832573.1| putative inner membrane protein translocase component YidC
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 544

 Score =  346 bits (887), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 135/570 (23%), Positives = 246/570 (43%), Gaps = 51/570 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +             +        +  +          
Sbjct: 1   MDSQRNLLL-IALLFVTFMLWQAWETDKNPPATTQAIQQATNAVTGDATNQGVP------ 53

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +  +L  Y   + S+ P   L   + ++  Y
Sbjct: 54  ---ASGQGKLITVKTDVLSLTINTRGGDIEQAHLLAYPDTLGSDKPFHLL--ETTSEFVY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N        +              I + +  A+ + + +T  L 
Sbjct: 109 QAQSGLTGKNGPDNPANGPRPLFTTTQDSFELADGQSELRIPMTYTAADGVTYTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
              Y   +  +V N S   +  +  G++ +         T ++ F +     A       
Sbjct: 169 RGDYALNVDYSVNNTSAQPLELTLFGQLKQSIELPKHRDTGSSNFALHTYRGAAFSSSED 228

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
             +KYS  +     N   +  W+ +  +Y+A+ +IP+   +    F     G+ +    F
Sbjct: 229 KYKKYSFSDMDENLNITTNGGWVAMLQQYFATAWIPTTAGANT--FYTSKLGNGQAAIGF 286

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            +  + +  G        L+ G +    +         P  ++ +D+GW +FI++P+F L
Sbjct: 287 KSAPVVVAAGSQQDLKTTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKL 341

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + + ++ +GN+G +I+  T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q
Sbjct: 342 LKFLHSFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRLLQPKLQAMRERIGDDK-Q 400

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + + M+ LYK+  +NPL GC+P+L+Q+P+F A+Y ++  S+E+RHAPF  WI DL+A D
Sbjct: 401 RMSQEMMALYKSEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 460

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528
           P                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+F 
Sbjct: 461 PYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 501

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 VFFLWFPSGLVMYYIVSNLVTILQQQLIYR 531


>gi|89074709|ref|ZP_01161167.1| putative inner membrane protein translocase component YidC
           [Photobacterium sp. SKA34]
 gi|89049473|gb|EAR55034.1| putative inner membrane protein translocase component YidC
           [Photobacterium sp. SKA34]
          Length = 544

 Score =  346 bits (887), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 143/568 (25%), Positives = 238/568 (41%), Gaps = 38/568 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N  + IAL  +    +Q +      +  +       T        ++    L D 
Sbjct: 1   MGSQRN-ILLIALLFVSFLLFQQWNADKTPKPQSQGVAQQSTQSSDIPSHSAEGQPLTDQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                S    + +K   L  +++  G    D  L  Y+  + S  P V L       + Y
Sbjct: 60  T----SSQNLITIKTDVLELTVDTLGGDVVDAKLLKYNNTLDSKDPFVLLNDTDG--HDY 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176
            A+   +              +++ +   +      +L     F        +  +    
Sbjct: 114 IAQSGLIGPNGADSQQGGRAQYSVTAKDFVMGPEQNELRVPMTFTKDGINYTKTFVLKRN 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            Y   +  TV NN+          ++      +  +         A   + +  ++   D
Sbjct: 174 DYAVNVDYTVANNTDKAASVQMYAQLRHKLSDSGGSLTMPTYLGGAYSANDTKYKKYSFD 233

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
             K    +   +  W+ I   Y+ S +IP       SQ    +     +         T+
Sbjct: 234 DMKDKNLDVAANEGWVAIMQHYFVSAWIPRDGADQTSQVYSTTSNGNGF-IGVRMPIETV 292

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
            PG+S      L+ G K    +    K+       + +D+GW +FIA P+  L+S+ + L
Sbjct: 293 APGQSKAIKATLWVGPKLQNEMAATAKN-----LNLTVDYGWLWFIANPLHKLLSFIHGL 347

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           VGN+GIAI++ T  V+   +PL K QY S A M+ +QPKI  +RE+      Q   + M+
Sbjct: 348 VGNWGIAIIILTFIVRGAMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD-DRQRQSQEMM 406

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RHAPF+GWI DL+A DP      
Sbjct: 407 ELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHAPFFGWIHDLSAQDPYY---- 462

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535
                          + PI+M ++MF   KMSP    D  Q  I+ +MPV+F F    FP
Sbjct: 463 ---------------VLPILMGITMFFIQKMSPSTVTDPMQQKIMTFMPVMFTFFFLFFP 507

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           +GL++YW  SN+++++QQ +I +    +
Sbjct: 508 SGLVLYWLVSNIVTLIQQTIIFRALEKK 535


>gi|157368277|ref|YP_001476266.1| putative inner membrane protein translocase component YidC
           [Serratia proteamaculans 568]
 gi|166977412|sp|A8G7P8|OXAA_SERP5 RecName: Full=Inner membrane protein oxaA
 gi|157320041|gb|ABV39138.1| 60 kDa inner membrane insertion protein [Serratia proteamaculans
           568]
          Length = 545

 Score =  346 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 138/570 (24%), Positives = 244/570 (42%), Gaps = 52/570 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      + +    +         Q  N         
Sbjct: 1   MDSQRNLLL-IALLFVSFMIWQAWQTDNAPQPVAQTTQ---------QTSNPATGDAASS 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +    L  +IN +G   +   L  Y   + S++P   L   +     Y
Sbjct: 51  AVPASGQGKLITVNTDVLSLTINTRGGDIEQAKLLAYPDTLGSSTPFQLL--ETTPAFVY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175
            A+             N        +    T         I L F   +  ++ +T  L 
Sbjct: 109 QAQSGLTGRNGPDNPANGERPLFQAAQDSYTLPEGQEELRIPLTFTGKDGAIYTKTFVLK 168

Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
            ++    +   V N S   +  +  G++ +         T +N F +     A       
Sbjct: 169 RNHYAVAVDYNVDNKSTTPLELTLFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSSSDD 228

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
             QKY+  +K    +      W+ +  +Y+A+ ++P+  T   + F     G       F
Sbjct: 229 KYQKYA-FDKDENLSVTTQGGWVAMLQQYFATAWVPA--TQGSNTFYTAKPGDNLSTIGF 285

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            +  + + PG        L+ G +    +         P  ++ +D+GW +FI++P+F L
Sbjct: 286 KSTPVVVQPGAQQQLNATLWVGPELQDQMAQLA-----PHLDLTVDYGWLWFISQPLFKL 340

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + + +  +GN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q
Sbjct: 341 LKFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK-Q 399

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + + M+ LYK+  +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A D
Sbjct: 400 RMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528
           P                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+F 
Sbjct: 460 PYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFT 500

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 501 VFFLWFPSGLVLYYIVSNLVTILQQQLIYR 530


>gi|311281728|ref|YP_003943959.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Enterobacter cloacae SCF1]
 gi|308750923|gb|ADO50675.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Enterobacter cloacae SCF1]
          Length = 547

 Score =  346 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 145/572 (25%), Positives = 255/572 (44%), Gaps = 54/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +           + KN Q  +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 50  GVPASGQGKLITVKTDVLDLTINTRGGDVEQAELLAYPKELGSNEPFQLL--ETTPQFIY 107

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               I L + +     F +T  L 
Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYSVDKDTFVLADGQNEISIPLTWTDKAGNTFTKTFVLK 167

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N+S   +  S  G++ +         T ++ F +     A       
Sbjct: 168 RGEYAVNVDYSVKNSSDKPLEISTFGQLKQSINLPTHRDTGSSNFALHTFRGAAYSTPDA 227

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N    + W+ +  +Y+A+ ++P  + + +  F   + G+     
Sbjct: 228 KYEKYKFDTIADNENLNVSAKDGWVAMLQQYFATAWVPRNDGTNN--FYTANLGNGIAAI 285

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +    I PG++ T  + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 286 GYKSQPTLIQPGQTGTVGSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 340

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 341 KLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 400

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 401 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 459

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 460 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 500

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 501 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 532


>gi|292490140|ref|YP_003533035.1| inner membrane protein YidC [Erwinia amylovora CFBP1430]
 gi|292901144|ref|YP_003540513.1| inner membrane protein [Erwinia amylovora ATCC 49946]
 gi|291200992|emb|CBJ48131.1| inner membrane protein [Erwinia amylovora ATCC 49946]
 gi|291555582|emb|CBA24181.1| Inner membrane protein yidC [Erwinia amylovora CFBP1430]
 gi|312174333|emb|CBX82586.1| Inner membrane protein yidC [Erwinia amylovora ATCC BAA-2158]
          Length = 548

 Score =  346 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 143/574 (24%), Positives = 243/574 (42%), Gaps = 57/574 (9%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N F+   + +S +I  AWQ       ++    +          NQ          
Sbjct: 1   MDSQRNLFLIAFLFVSFMIWQAWQTDNAPQPLQTQTTQNTASAAGDAANQGVP------- 53

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                A      + +K   L  +IN +G   D   L  Y   + S+ P   LL  S    
Sbjct: 54  -----ASGQGKTITVKTDVLSLNINTRGGDIDQAQLLTYPDKLDSDQPF--LLLESTPGF 106

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTIS 173
            Y A+             N        S              I L F   N   + +T  
Sbjct: 107 LYQAQSGLTGRNGPDNPANGTRPLYTSSQDHFELADGQSELRIPLTFTAENGASYTKTFV 166

Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227
           L    Y   +   + N +   +  S  G++ +         T ++ F +     A     
Sbjct: 167 LKRGEYAIGVDYQINNTTQQPLEVSMFGQLKQTIDLPKHRDTGSSNFALHTFRGAAYSSS 226

Query: 228 S--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
                + K+  I  +   +   +N W+ +  +Y+A+ ++P    S        + G+   
Sbjct: 227 ETNYEKYKFDTIRDNENLSTTTNNGWVAMLQQYFATAWVPQTAGSNT--LYTSNLGNGIA 284

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
              + +  +TI  G        L+ G +    +         P  ++ +D+GW +FI++P
Sbjct: 285 AIGYKSAPVTIAAGSRQQLAATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQP 339

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+ + +  +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+   
Sbjct: 340 LFKLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q + + M+ LYK   +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL
Sbjct: 400 DK-QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDL 458

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524
           AA DP                     I PI+M ++MF   KMSP    D  Q  I+ +MP
Sbjct: 459 AAQDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           V+F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533


>gi|157964068|ref|YP_001504102.1| 60 kDa inner membrane insertion protein [Shewanella pealeana ATCC
           700345]
 gi|189036363|sp|A8HAI0|OXAA_SHEPA RecName: Full=Inner membrane protein oxaA
 gi|157849068|gb|ABV89567.1| 60 kDa inner membrane insertion protein [Shewanella pealeana ATCC
           700345]
          Length = 545

 Score =  346 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 137/566 (24%), Positives = 237/566 (41%), Gaps = 39/566 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           ME   N  + I L  +    WQ +     P+       + +I      +   +       
Sbjct: 1   MESQRN-ILLIGLLFVSFLLWQQWQADKAPQPVAAAQTQSSIPASTVADAHSSDVPDADS 59

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                  +    + +    L   I+  G       L  + L+   + P V L   ++   
Sbjct: 60  AVPEATPASKELITVITDQLEIKIDPVGGDIVYSALLSHKLEEKGDDPFVLLEQTNDIY- 118

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISL 174
            Y A+   +              ++  S +         L     + +   + + +    
Sbjct: 119 -YIAQSGLIGRDGIDSSVKGRAHFDSASREYKLADGQETLNVPLTYVSDKGVAYTKVFVF 177

Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
               Y   +   + N S  Q++    G+I     ++ ++         A     +  E+ 
Sbjct: 178 TRGKYNIAVDYKINNTSDAQLQVQMYGQIKHSIKKSESSMMMPTYRGGAFSTADTRYEKY 237

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
             D       +      W+ +   Y+ S ++P             + G A     F    
Sbjct: 238 SFDDMADKNLDKSTLGGWVAMLQHYFVSAWVPPANDKNIIFSSVSAGGLAN--IGFRGAL 295

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
             I PG   +     + G K+   +         P   +++D+G+ +++A P++ L+ +F
Sbjct: 296 YDIAPGTEQSIKAEFYVGPKDQEALSALS-----PSLNLVVDYGFLWWLAVPIYKLLMFF 350

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
            ++VGN+GIAI+L T+ V+ + +PL K QY S A M+N+QPK+ EL+E+F     Q + +
Sbjct: 351 QSIVGNWGIAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLAELKERFGD-DRQKMGQ 409

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
           AM++LYK   +NP+ GC PILLQ+P+F A+Y V+  S+E+RHAPF  WI DL+  DP   
Sbjct: 410 AMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQDPYY- 468

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFAL 531
                             + PI+M +SMF+  KM P  P  D  Q  ++ WMPV+F    
Sbjct: 469 ------------------VMPILMGISMFVMQKMQPMAPTMDPMQVKMMQWMPVIFTVFF 510

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIM 557
             FPAGL++YW   N+++I QQ +I 
Sbjct: 511 LWFPAGLVLYWLVGNLVAITQQKIIY 536


>gi|308051501|ref|YP_003915067.1| protein translocase subunit yidC [Ferrimonas balearica DSM 9799]
 gi|307633691|gb|ADN77993.1| protein translocase subunit yidC [Ferrimonas balearica DSM 9799]
          Length = 539

 Score =  346 bits (886), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 136/565 (24%), Positives = 244/565 (43%), Gaps = 39/565 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + I L  +    WQ + +    +      + + T  + N V  S A      
Sbjct: 1   MDSQRNLIL-IGLLFVSFLLWQQWTLDQAPQAETPAAQTVATADKANDVPQSAAKSAAPA 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            A        ++++  +L  +I+  G       L  + ++   +  +  L + +     Y
Sbjct: 60  GATI--SDRLIQVQTDTLKLTIDATGGDVVYAALPEHKVEQGGDEALTILENENG--FTY 115

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTISL-DE 176
            A+   +                  +   L          L+F +AN + FE+  +    
Sbjct: 116 IAQSGLIGLNGPHASGQRPVYQAQAANYTLQDGQDTLVVPLIFTDANGVKFEKRYTFTRG 175

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           HY  ++   V N S   I+     ++ +   ++  +         A     +  E+   D
Sbjct: 176 HYDVRVDYLVHNTSDAAIQVQMYSQLKQSIGKSEGSMMMPTYRGGAYSTADTRYEKYAFD 235

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
             + +         W+ +   Y+ S ++PS +++      Y +              + I
Sbjct: 236 KMEKNNLAEATQGGWIAMLQHYFVSAWVPSADSTNDI---YSNVVSGDAIIGVKQPAVQI 292

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
            PG   T    L+ G K    +         P   +++D+GW +FIA+P+  L+ +  +L
Sbjct: 293 APGAEQTLGATLYVGPKNQEALSALS-----PTLNLVVDYGWLWFIAQPLHSLLMFLQSL 347

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           V N+G+AI+L T+ ++   +PL K QY S A M+ +QPK+ +L+E+F     Q + +AM+
Sbjct: 348 VSNWGVAIILMTLIIRGFMYPLTKAQYTSMAKMRKLQPKLADLKERFGD-DRQRMSQAMM 406

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LY+   +NP+ GC P+LLQ P+F A Y V+  S+E+RHAPF+GWI DL+  DP      
Sbjct: 407 ELYQKEKVNPMGGCLPLLLQFPIFIAFYWVLLESVELRHAPFFGWITDLSVKDPYY---- 462

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--SPPPADKGQAMILNWMPVVFVFALSSF 534
                          + P++M +SMF   KM  +    D  Q  I+ +MPV+F      F
Sbjct: 463 ---------------VLPVLMGISMFAMQKMQPTMATMDPMQQKIMQYMPVMFTVFFLWF 507

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKM 559
           P+GL++YW   N+++I QQ  I + 
Sbjct: 508 PSGLVLYWLVGNLVAIAQQLFIYRS 532


>gi|259910298|ref|YP_002650654.1| putative inner membrane protein translocase component YidC [Erwinia
           pyrifoliae Ep1/96]
 gi|224965920|emb|CAX57453.1| Inner membrane protein OxaA [Erwinia pyrifoliae Ep1/96]
 gi|283480422|emb|CAY76338.1| Inner membrane protein yidC [Erwinia pyrifoliae DSM 12163]
 gi|310765879|gb|ADP10829.1| putative inner membrane protein translocase component YidC [Erwinia
           sp. Ejp617]
          Length = 548

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 144/574 (25%), Positives = 243/574 (42%), Gaps = 57/574 (9%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N F+   + +S +I  AWQ       ++    +          NQ          
Sbjct: 1   MDSQRNLFLIAFLFVSFMIWQAWQTDNAPQPLQTQTTQNTASAAGDAANQGVP------- 53

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                A      + +K   L  +IN +G   D   L  Y   + S+ P   LL  S    
Sbjct: 54  -----ASGQGKTITVKTDVLSLNINTRGGDIDQAQLLTYPDKLGSDQPF--LLLESTPGF 106

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTIS 173
            Y A+             N        S              I L F   N   + +T  
Sbjct: 107 LYQAQSGLTGRNGPDNPANGARPLYTSSQDHFELADGQSELRIPLTFTAENGATYTKTFV 166

Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227
           L    Y   +   + N +   +  S  G++ +         T ++ F +     A     
Sbjct: 167 LKRGEYAIGVDYQINNTTQQPLEVSMFGQLKQTIDLPKHRDTGSSNFALHTFRGAAYSSS 226

Query: 228 S--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
                + K+  I  +   +   SN W+ +  +Y+A+ ++P    S        + G+   
Sbjct: 227 ETNYEKYKFDTISDNENLSTTTSNGWVAMLQQYFATAWVPQTAGSNT--LYTSNLGNGIA 284

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
              + +  +TI  G        L+ G +    +         P  ++ +D+GW +FI++P
Sbjct: 285 AIGYKSAPVTIAAGSQQQLAATLWVGPEIQDRMAAVA-----PHLDLTVDYGWLWFISQP 339

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+ + +  +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+   
Sbjct: 340 LFKLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q + + M+ LYK   +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL
Sbjct: 400 DK-QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDL 458

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524
           AA DP                     I PI+M ++MF   KMSP    D  Q  I+ +MP
Sbjct: 459 AAQDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           V+F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533


>gi|90023654|ref|YP_529481.1| protein translocase subunit yidC [Saccharophagus degradans 2-40]
 gi|122995696|sp|Q21DG0|OXAA_SACD2 RecName: Full=Inner membrane protein oxaA
 gi|89953254|gb|ABD83269.1| protein translocase subunit yidC [Saccharophagus degradans 2-40]
          Length = 557

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 142/579 (24%), Positives = 248/579 (42%), Gaps = 49/579 (8%)

Query: 1   MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQT---------------V 43
           M    N  +A  L  + ++   W  F    ++  + N+   + T                
Sbjct: 1   MNWLRNSLIAAILVITYVLFIRWNEFSERQQVPTIANQPAAVTTPAYEAVPSDDAVASSA 60

Query: 44  KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            + + V     +       +A+     V +K   L   I+  G     + L  +  D + 
Sbjct: 61  TEESDVPEVSVSAEPVAAPKAVYQPKLVTVKTDVLEVQIDTNGGDVLQVVLLKHLADKAD 120

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK---LVF 160
           ++    L++  N+ + Y A                   +++        +       L  
Sbjct: 121 DNQPFVLMT-QNSAHTYVARSGLAGGNGPDGAKKGRAKYSVAKTNYSLNSDDQVVVDLTL 179

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
              N  + +R       YL  +   +TN +         G+I+R   + +    G++   
Sbjct: 180 DQENAQITKRFTFTKSSYLIDVEYIITNRADTPWAAKLYGQIIRDGSEPSYGYMGMRPYL 239

Query: 221 IAVLGDKSLVEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
            A +    +  +K   D          +   W+ +   Y+ S +IP K+ +   +    S
Sbjct: 240 GAAITTPEVNYEKVSFDDMDDGPFKVEQKGGWVSLIQHYFISAWIPPKDATNSYELSKSS 299

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
            G   Y  +F +   T+ P    T     +AG K    +         P  ++ ID+ + 
Sbjct: 300 KG--NYVLRFISETTTVAPHSVGTVKAGFYAGPKNIRRLEEIS-----PHLDLTIDYSFL 352

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +FIAKP+F  + + + LVGN+G+AI+L TV +K +FF  +   Y S A M+ +QP + EL
Sbjct: 353 WFIAKPLFFALDFIHGLVGNWGVAIILLTVLIKAVFFYPSAMSYRSMAKMRKLQPMMAEL 412

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +E++     Q +   +++LYK   +NP  GC PILLQ+PVF ++Y +I  S+E+RH PF+
Sbjct: 413 KERY-GEDKQKMSGELMKLYKKEKVNPFGGCLPILLQMPVFISLYWMIMESVELRHQPFF 471

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            WI+DL+  DP                     I P++M ++M+IQ K++P P D  QA +
Sbjct: 472 LWIQDLSVKDPLF-------------------ILPLLMGVTMYIQQKLNPTPPDPMQAKV 512

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +  MP+ F F    FPAGL++YW  +N +SI QQ VI +
Sbjct: 513 MQMMPIGFTFLFMFFPAGLVLYWVVNNTLSISQQYVITR 551


>gi|237747151|ref|ZP_04577631.1| preprotein translocase YidC subunit [Oxalobacter formigenes HOxBLS]
 gi|229378502|gb|EEO28593.1| preprotein translocase YidC subunit [Oxalobacter formigenes HOxBLS]
          Length = 557

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 156/578 (26%), Positives = 248/578 (42%), Gaps = 46/578 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFY-------------VYPRIEEMNNERKNIQTVKQPN 47
           M+      + + L++ +   W N+                     +      + T   P 
Sbjct: 1   MDTKKRTTLLLILAISLFMLWDNWQVYRGGTSLIFQHEAKKTDSNVALPEVPVDTAVVPG 60

Query: 48  QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
           +       V    +      +  V +    L   IN +G  F +L L  Y  +V     +
Sbjct: 61  EAGTPATPVAEVMKEAPKKQAELVTVTTDVLKVQINSEGGVFQNLELLKYPDNVDPEKDM 120

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167
           +  L  S     Y A+                      S         + +  +     L
Sbjct: 121 I--LFESVPPRIYLAQTGLTGGVYPNHATRFTVHPGERSLADGKDEVKLVMDAERDGVRL 178

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLG 225
            +        Y+  +   VTN + + I  S   +++R   +P+  +       G      
Sbjct: 179 TKTYTFKRGSYVVDVDQKVTNLTNEPIDASLYLQLLRDSSRPEGQSRFISTFTGPAVYTQ 238

Query: 226 DKSLVEQKYSDIEKSS--ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
                + K+ DI ++          N W+ I   Y+ S FIP  +    +  K +  G  
Sbjct: 239 ADKFQKLKFDDITETKGADHATKADNGWIAIVQHYFVSAFIPKDKVERENYTKKV--GED 296

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            Y         TI P  S +  + L+AG +E   +         P  E++ D+GW   IA
Sbjct: 297 LYAIGTVIPLGTIAPKASASNDSRLYAGPQESIILEQTA-----PGLELVKDYGWLTIIA 351

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP+F LM++ +  VGN+G  I+L T  +KL+F PL+   Y S A MK   P+I ELR+++
Sbjct: 352 KPIFWLMTHIHKEVGNWGWTIILLTCLIKLVFLPLSAASYKSMARMKQFTPRIQELRDRY 411

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
           K    Q + + ++ LYK   INPL GC P+++QIPVF ++Y V+  S+E+R+AP+ GWI+
Sbjct: 412 KDDK-QRMNQELMALYKAEKINPLGGCLPVVVQIPVFISLYWVLLASVEIRNAPWLGWIQ 470

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           +LAA DP                     I PIIM+ SMFIQ KMSPPP D  QA ++ ++
Sbjct: 471 NLAAPDPFY-------------------ILPIIMAGSMFIQQKMSPPPPDPLQAKLMMFL 511

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           P+VF      FP+GL++YW  +N++SI QQ  I K +G
Sbjct: 512 PIVFSITFFFFPSGLVLYWVVNNLLSIAQQYWINKRYG 549


>gi|90413740|ref|ZP_01221728.1| putative inner membrane protein translocase component YidC
           [Photobacterium profundum 3TCK]
 gi|90325209|gb|EAS41706.1| putative inner membrane protein translocase component YidC
           [Photobacterium profundum 3TCK]
          Length = 538

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 137/569 (24%), Positives = 241/569 (42%), Gaps = 42/569 (7%)

Query: 1   MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N  +   L  S ++   W      P+ +    E++   +   P+   +       
Sbjct: 1   MDSQRNILLIALLFVSFLLFQQWNMD-NSPQPQGQGTEQQVNNSGDVPSHSGDGQPI--- 56

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
               Q  +    + +    L  S++  G    +  L  Y  ++ S  P + L       +
Sbjct: 57  --PDQETTSKDVITINTDVLALSVDTLGGDVTEAKLLAYDNELDSADPFILL--KDEAGH 112

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTISLD 175
           +Y A+   +             +        L          + +        +  +   
Sbjct: 113 SYIAQSGLIGANGIDSANGRAQLAVTAKDFTLADGQDELRVPMTYVKDGITYTKTFVLKR 172

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             Y   +  T+ N S          ++ ++     ++         A   D +  ++   
Sbjct: 173 NSYAVDVEYTIDNQSASAASVQMYAQLRQNLMDDGSSLTMPTYRGGAYSTDTTNYKKYSF 232

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D  +    N   +N W  +   Y+ S +IP  E + +   +  +    +          T
Sbjct: 233 DDMQDKSLNMTTTNGWAAMLQHYFVSAWIPRSEEASNLFTRASNG---QGYIGVRLPTTT 289

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I  G   T T+ L+ G K    +     +       + +D+GW +FIA P+  L+S+  +
Sbjct: 290 IAAGTEQTITSTLWVGPKLQKEMEATAAN-----LNLTVDYGWLWFIASPLHKLLSFIQS 344

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           +VGN+GIAIM+ T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + M
Sbjct: 345 IVGNWGIAIMMLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERLGD-DRQRMSQEM 403

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NPL GC PI+LQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP     
Sbjct: 404 MELYKKEKVNPLGGCLPIVLQMPIFIALYWSLMESVELRHSPFFGWIHDLSAQDPYY--- 460

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534
                           I P++M +SMF+  KMSP    D  Q  I+ +MPV+F F    F
Sbjct: 461 ----------------ILPLLMGVSMFMIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLWF 504

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           P+GL++YW  SNV++++QQ +I +    +
Sbjct: 505 PSGLVLYWLVSNVVTLIQQTLIYRSLEKK 533


>gi|156936084|ref|YP_001440000.1| putative inner membrane protein translocase component YidC
           [Cronobacter sakazakii ATCC BAA-894]
 gi|166975864|sp|A7MN02|OXAA_ENTS8 RecName: Full=Inner membrane protein oxaA
 gi|156534338|gb|ABU79164.1| hypothetical protein ESA_03978 [Cronobacter sakazakii ATCC BAA-894]
          Length = 550

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 146/592 (24%), Positives = 254/592 (42%), Gaps = 55/592 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++     V+Q  Q   + A      
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQTW---------EQDKAPKPQVQQTTQTTTTAAGSAASQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ S+ P   L +  N     
Sbjct: 51  GVPASGQGKLITVKTDVLSLTINTRGGDIEQALLLAYPKELGSSEPFQLLETTPNFVYQA 110

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175
            + L   +  +N        ++N      +         I + F +     F +T +L  
Sbjct: 111 QSGLTGRNGPDNPNNNKGRPLYNTERDTYVLADGQDELVIPMTFTDEAGNAFTKTFALKR 170

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS-- 228
             Y   +   V N     +  S  G++ +         T ++ F +     A        
Sbjct: 171 GQYAVYVGYDVKNAGTQPLEISSFGQLKQTIDLPSHRDTGSSNFALHTFRGAAYSTPDEK 230

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             + K+  I      N +    W+ +  +Y+A+ ++P+      S F     GH      
Sbjct: 231 YEKYKFDTIADDENLNVNAKGGWVAMLQQYFATAWVPASN--VTSNFYTADLGHGVAAIG 288

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
           + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F 
Sbjct: 289 YKSEPVQVQPGQTAKLASTLWVGPEIQDKMAQVA-----PHLDLTVDYGWLWFISQPLFK 343

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+ + ++ +GN+G +I+  T  V+ + +PL K QY S A M+ +QPKI  +RE+      
Sbjct: 344 LLKWIHSFLGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKIQAMRERLGDDK- 402

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+RHAPF  WI DL+A 
Sbjct: 403 QRMSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQ 462

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527
           DP                     I PI+M  +MF   KMSP    D  Q  I+ +MPV+F
Sbjct: 463 DPYY-------------------ILPILMGATMFFIQKMSPTTVTDPMQQKIMTFMPVIF 503

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
                 FP+GL++Y+  SN+++I+QQ +I +           L S   K   
Sbjct: 504 TVFFLWFPSGLVLYYIVSNLVTILQQQLIYRGLEKR-----GLHSREKKKKA 550


>gi|237749310|ref|ZP_04579790.1| preprotein translocase YidC subunit [Oxalobacter formigenes OXCC13]
 gi|229380672|gb|EEO30763.1| preprotein translocase YidC subunit [Oxalobacter formigenes OXCC13]
          Length = 559

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 160/580 (27%), Positives = 255/580 (43%), Gaps = 48/580 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF----------YVYPRIEEMNNERKNIQTVKQPNQVD 50
           ME      + + L+V + + W N+          +   + ++   +    +   Q   V 
Sbjct: 1   MEAKKRTTLLLILAVSLFFLWDNWQVYRGGKSLIFTQEKAKKSETQTGLPEVPVQTASVT 60

Query: 51  NSYAAVLIDDRAQALSMSPR------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                      A A    P+      V +        IN  G  F +L L  Y  +V S 
Sbjct: 61  AEENPAADASNAVAKKEEPKKQPVELVSITTDVFKVQINPDGGVFQNLELLKYPDNVDST 120

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
             +V  L  S     Y A+               +      +    +    + +  +   
Sbjct: 121 KDMV--LFESAPPRIYLAQTGLTGGLYPNHATRFHIRPGERTLGENSDEVKLVMDAEQDG 178

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIA 222
             L +        Y+  +   VTN S + I  S   +++R   +P+  +       G   
Sbjct: 179 VRLTKTYTFKRGSYVIDVDQKVTNLSHEPINASLYLQLLRDSERPEGQSRFISTFTGPAV 238

Query: 223 VLGDKSLVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281
              +    + K+ +I +  + +     N W+G+   Y+ S FIP  + +  +  K +  G
Sbjct: 239 YSEEDKFQKIKFDNIGEGKMDHAIKTDNGWVGMVQHYFVSAFIPQDKVARENYTKKV--G 296

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
              Y         TI P  S +    L+ G +E   +         P  E++ D+GW   
Sbjct: 297 ENLYAIGTVIPLGTIAPNASASNDTRLYVGPQESKLLEKTA-----PGLELVKDYGWLTI 351

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           IAKP+F LM++ +N VGN+G  I+L T  +KL+F PL+   Y S A MK   P+I ELRE
Sbjct: 352 IAKPIFWLMTHIHNEVGNWGWTIILLTCLIKLIFAPLSAASYRSMAKMKQFTPRITELRE 411

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           ++K    Q + K ++ LYK   INPL GC P+++QIPVF ++Y V+  S+E+R+AP+ GW
Sbjct: 412 RYKDDK-QRMNKELMGLYKAEKINPLGGCLPVVIQIPVFISLYWVLLASVEIRNAPWLGW 470

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
           I++LAA DP                     I PIIM+ SMFIQ KMSPPP D  QA ++ 
Sbjct: 471 IQNLAAPDPYY-------------------ILPIIMAGSMFIQQKMSPPPPDPMQAKMMM 511

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           ++P+ F      FP+GL++YW  +N++SI QQ  I K + 
Sbjct: 512 FLPIAFSITFFFFPSGLVLYWVVNNLLSIAQQYWITKKYD 551


>gi|242241427|ref|YP_002989608.1| inner membrane protein translocase component YidC [Dickeya dadantii
           Ech703]
 gi|242133484|gb|ACS87786.1| 60 kDa inner membrane insertion protein [Dickeya dadantii Ech703]
          Length = 543

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 149/570 (26%), Positives = 252/570 (44%), Gaps = 52/570 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      E            +Q N      A+  +  
Sbjct: 1   MDSQRNLLI-IALLFVTFMIWQQW------ETDKTPPAATPITQQANNTVGDAASQGVP- 52

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   ++ +L  Y  D+ S  P   L   +     Y
Sbjct: 53  ---ASGQGKLITVKTDVLSLTINTRGGDIEEADLLAYPADLGSKQPFKLL--ETTQAFTY 107

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N +      +              I L + +AN I + +T +L 
Sbjct: 108 QAQSGLTGKNGPDNPANGSRPLFSATQDHFELADGQNDIRIPLTYTDANGISYTKTFALK 167

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
              Y   +   V N S   +  +  G++ +         T +N F +     A L     
Sbjct: 168 RGEYALNVEYGVNNTSAQPLELTLFGQLKQSIDLPSHRDTGSNNFALHTYRGAALSSSDD 227

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
             +KYS  +     N      W+ +  +Y+AS +IP+   +    F   + G+      F
Sbjct: 228 KYRKYSFSDMKENLNVATQGGWVAMLQQYFASAWIPAAGGANT--FYTSNLGNGLAAIGF 285

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            A  + + PG   T    L+ G +    +         P  ++ +D+GW +FI++P+F L
Sbjct: 286 KATPVIVQPGSQQTLGATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKL 340

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + + ++ +GN+G +I+  T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q
Sbjct: 341 LKFLHSFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK-Q 399

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A D
Sbjct: 400 RMSQEMMALYKAEKVNPLGGCFPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528
           P                     + PI+M L+MF   KMSP    D  Q  I+ +MPV+F 
Sbjct: 460 PYY-------------------VLPILMGLTMFFIQKMSPTTVTDPMQQKIMTYMPVMFT 500

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                FP+GL++Y+  SN+++IVQQ +I +
Sbjct: 501 VFFLWFPSGLVLYYIVSNLVTIVQQQLIYR 530


>gi|127514791|ref|YP_001095988.1| 60 kDa inner membrane insertion protein [Shewanella loihica PV-4]
 gi|166977416|sp|A3QJT1|OXAA_SHELP RecName: Full=Inner membrane protein oxaA
 gi|126640086|gb|ABO25729.1| protein translocase subunit yidC [Shewanella loihica PV-4]
          Length = 542

 Score =  345 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 137/564 (24%), Positives = 239/564 (42%), Gaps = 38/564 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +      + +  E   + +        +   A     
Sbjct: 1   MESQRN-ILLIGLLFVSFLLWQQWQTDKNPQPVATESSVVASTVTDAHSADVPDADAALP 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            A A S    + +    L   IN  G       L G+ L+     P V L    +    Y
Sbjct: 60  EAVAASK-ELISVTTDQLTLKINPVGGDIVYSALVGHKLEQDKEEPFVLLQQTKDIY--Y 116

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175
            ++   +              ++  S          T  I L +   N + + +  +L  
Sbjct: 117 ISQSGLIGRNGIDSSTKGRAHFSSQSQAYTLADGQDTLEIPLTYVADNGVTYTKVFTLHR 176

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             +   +   + N S +Q++    G+I     ++ ++         A     +  E+   
Sbjct: 177 GKFDVGVEYRINNTSAEQLQVQMYGQIKHSIKKSESSMMMPTYRGAAFSTADTRYEKYSF 236

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           +       +      W  +   Y+ S ++P             + G A     F      
Sbjct: 237 EDMADKNLDKKTLGGWAAMLQHYFVSAWVPPANDQNTIFSSVSAGGLAN--IGFRGAVYD 294

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           + PG   T +   + G K+   +    +        +++D+G+ +++A P+  L+ ++ +
Sbjct: 295 VAPGTQQTISAQFYVGPKDQEALSAISES-----LNLVVDYGFLWWLAIPIHWLLMFYQS 349

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G+AI+L T+ V+ + +PL K QY S A M+N+QPK+ +++E+F     Q + +AM
Sbjct: 350 FVGNWGVAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLQDMKERFGD-DRQKMGQAM 408

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NP+ GC PILLQ+P+F A+Y V+  S E+RHAPF  WI DL+  DP     
Sbjct: 409 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESYELRHAPFMLWITDLSVQDPYY--- 465

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533
                           + P++M +SMF+  KM P  P  D  Q  ++ WMPV+F      
Sbjct: 466 ----------------VLPLLMGVSMFLMQKMQPMAPTMDPMQQKMMQWMPVIFTVFFLW 509

Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557
           FPAGL++YW   N+++I QQ +I 
Sbjct: 510 FPAGLVLYWLVGNLVAITQQKIIY 533


>gi|160877622|ref|YP_001556938.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS195]
 gi|189036361|sp|A9KX20|OXAA_SHEB9 RecName: Full=Inner membrane protein oxaA
 gi|160863144|gb|ABX51678.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS195]
 gi|315269821|gb|ADT96674.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Shewanella baltica OS678]
          Length = 541

 Score =  345 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 141/564 (25%), Positives = 239/564 (42%), Gaps = 39/564 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +      + +  E   +      +  D   A   +  
Sbjct: 1   MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSLVANAANSHSADVPEADTGVP- 58

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            A   + S  + +K   L   IN  G       L  + ++   + P V L    +    Y
Sbjct: 59  -AAVTATSKLITVKTDQLDVQINPIGGDIVFAALVSHKMEQDKDQPFVLLEQTKD--FTY 115

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175
            A+   +              ++  + +        T  + L +   N + + +      
Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFSTAATEYTLAEGQDTLEVPLTYVADNGVTYTKVFVFHR 175

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             +   +   + N S   ++    G+I +    + ++         A        E+   
Sbjct: 176 GKFNVDVDYKINNTSAAPLQVQMYGQIKQTIKPSESSMVMPTYRGGAFSTQDVRYEKYKF 235

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D    S  N      W  +   Y+ S +IP    S        + G A     F      
Sbjct: 236 DDMAKSNLNQATLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRGAVYD 293

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I PG +   ++  + G K+   +             +++D+G+ +++A P+  L+ ++ +
Sbjct: 294 IAPGATQEISSQFYVGPKDQKALSAISDT-----LNLVVDYGFLWWLAVPIHWLLMFYQS 348

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F     Q + +AM
Sbjct: 349 FVGNWGLAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLTDLKERFGD-DRQKMGQAM 407

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NP+ GC PI+LQ+P+F A+Y V+  S E+RHAPF  WI DL+  DP     
Sbjct: 408 MELYKKEKVNPMGGCLPIILQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYY--- 464

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533
                           I P++M +SMF+  KM P  P  D  Q  ++ WMPV+F      
Sbjct: 465 ----------------ILPLLMGVSMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLW 508

Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557
           FPAGL++YW   N+++I QQ +I 
Sbjct: 509 FPAGLVLYWLVGNIVAITQQKIIY 532


>gi|253690653|ref|YP_003019843.1| 60 kDa inner membrane insertion protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|259515701|sp|C6DK98|OXAA_PECCP RecName: Full=Inner membrane protein oxaA
 gi|251757231|gb|ACT15307.1| 60 kDa inner membrane insertion protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 544

 Score =  345 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 136/570 (23%), Positives = 246/570 (43%), Gaps = 51/570 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +             +        +  +          
Sbjct: 1   MDSQRNLLL-IALLFVTFMLWQAWETDKNPPATTQAIQQATNAVTGDATNQGVP------ 53

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +  +L  Y   + S+ P   L   + ++  Y
Sbjct: 54  ---ASGQGKLITVKTDVLSLTINTRGGDVEQAHLLAYPDTLGSDKPFHLL--ETTSEFVY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N        +              I + +  A+ + + +T  L 
Sbjct: 109 QAQSGLTGKNGPDNPANGPRPLFTTTQDSFELADGQNELRIPMTYTAADGVTYTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
              Y   +  +V N S   +  +  G++ +         T ++ F +     A       
Sbjct: 169 RGDYALNVDYSVNNTSAQPLELTLFGQLKQSIDLPKHRDTGSSNFALHTYRGAAFSSSED 228

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
             +KYS  +     N   ++ W+ +  +Y+A+ +IP+   +    F     G+ +    F
Sbjct: 229 KYKKYSFSDMDENLNITTNSGWVAMLQQYFATAWIPTTAGANT--FYTNKLGNGQAAIGF 286

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            A  + +  G        L+ G +    +         P  ++ +D+GW +FI++P+F L
Sbjct: 287 KAAPVVVAAGSQQNLNATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKL 341

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + + +  +GN+G +I+  T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q
Sbjct: 342 LKFLHGFIGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKLQAMRERIGDDK-Q 400

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + + M+ LYK+  +NPL GC+P+L+Q+P+F A+Y ++  S+E+RHAPF  WI DL+A D
Sbjct: 401 RMSQEMMALYKSEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 460

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528
           P                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+F 
Sbjct: 461 PYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 501

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 VFFLWFPSGLVMYYIVSNLVTILQQQLIYR 531


>gi|260595827|ref|YP_003208398.1| membrane protein insertase [Cronobacter turicensis z3032]
 gi|260215004|emb|CBA26663.1| Inner membrane protein oxaA [Cronobacter turicensis z3032]
          Length = 549

 Score =  345 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 146/571 (25%), Positives = 254/571 (44%), Gaps = 50/571 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N FV IAL  +    WQ +           ++     V+Q  Q   + A      
Sbjct: 1   MDSQRNLFV-IALLFVSFMIWQAW---------EQDKAPKPQVQQTTQTTTTAAGSAASQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ S+ P   L +  N     
Sbjct: 51  GVPASGQGKLITVKTDVLSLTINTRGGDIEQALLLAYPKELGSSEPFQLLETTPNFIYQA 110

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANNILFERTISLD- 175
            + L   +  +N        ++N+     +      +L     F +A    F +T +L  
Sbjct: 111 QSGLTGRNGPDNPNNNQGRPLYNVERDTYVLADGQDELLIPMTFTDAAGNAFTKTFALKR 170

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS-- 228
             Y   +   V N     +  S  G++ +         T +N F +     A        
Sbjct: 171 GQYAVYVGYDVKNAGTQPLEVSSFGQLKQTIDLPSHRDTGSNNFALHTFRGAAYSTPDEK 230

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             + K+  I      N +    W+ +  +Y+A+ ++P+      S F     GH      
Sbjct: 231 YEKYKFDTIADDENLNVNAKGGWVAMLQQYFATAWVPASN--VTSNFYTADLGHGVAAIG 288

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
           + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F 
Sbjct: 289 YKSEPVQVQPGQTAKLASTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFK 343

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+ + ++ +GN+G +I+  T  V+ + +PL K QY S A M+ +QPKI  +RE+      
Sbjct: 344 LLKWIHSFLGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKIQAMRERLGDDK- 402

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+RHAPF  WI DL+A 
Sbjct: 403 QRMSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQ 462

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527
           DP                     I PI+M  +MF   KMSP    D  Q  I+ +MPV+F
Sbjct: 463 DPYY-------------------ILPILMGATMFFIQKMSPTTVTDPMQQKIMTFMPVIF 503

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                 FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 504 TVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 534


>gi|330447273|ref|ZP_08310923.1| inner-membrane protein insertion factor [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328491464|dbj|GAA05420.1| inner-membrane protein insertion factor [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 544

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 143/568 (25%), Positives = 238/568 (41%), Gaps = 38/568 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N  + IAL  +    +Q +      +          +        +     L D 
Sbjct: 1   MGSQRN-ILLIALLFVSFLLFQQWNADKNPQPQGQGVAQQASQNSDIPSHSGEGQPLTDQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                S    + +K   L  +++  G    D  L  Y+  + S  P V L       + Y
Sbjct: 60  T----SSQNLITIKTDVLELTVDTLGGDVVDAKLLKYNNTLGSKDPFVLL--SDTNGHDY 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176
            A+   +         N    +++ +   +      +L     F        +  +    
Sbjct: 114 IAQSGLIGPNGADSQQNGRAQYSVTAKDFVMGPEQNELRVPMTFTKDGISYTKTFVLKRN 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            Y   +  TV NN+          ++      +  +         A   + +  ++   D
Sbjct: 174 DYAVNVDYTVANNTDKAASVQMYAQLRHKLSDSGGSLTMPTYLGGAYSANDTKYKKYSFD 233

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
             K    +   +  W  I   Y+ S +IP       SQ    +     Y         T+
Sbjct: 234 DMKDKNLDVAANEGWAAIMQHYFVSAWIPRDGADQTSQVYSTTSNGNGY-IGVRMPIETV 292

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
            PG+S      L+ G K    +    K+       + +D+GW +FIA P+  L+S+ +++
Sbjct: 293 APGQSKEIKATLWVGPKLQNEMAATAKN-----LNLTVDYGWLWFIASPLHKLLSFIHSI 347

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           VGN+GIAI++ T  V+   +PL K QY S A M+ +QPKI  +RE+      Q + + M+
Sbjct: 348 VGNWGIAIIVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD-DRQRMSQEMM 406

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RHAPF+GWI DL+A DP      
Sbjct: 407 ELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHAPFFGWIHDLSAQDPYY---- 462

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535
                          + PI+M ++MF   KMSP    D  Q  I+ +MPV+F F    FP
Sbjct: 463 ---------------VLPILMGITMFFIQKMSPSTVTDPMQQKIMTFMPVMFTFFFLFFP 507

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           +GL++YW  SN+++++QQ +I +    +
Sbjct: 508 SGLVLYWLVSNIVTLIQQTIIFRQLEKK 535


>gi|146309633|ref|YP_001190098.1| putative inner membrane protein translocase component YidC
           [Pseudomonas mendocina ymp]
 gi|166977399|sp|A4Y1A0|OXAA_PSEMY RecName: Full=Inner membrane protein oxaA
 gi|145577834|gb|ABP87366.1| protein translocase subunit yidC [Pseudomonas mendocina ymp]
          Length = 581

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 145/604 (24%), Positives = 243/604 (40%), Gaps = 72/604 (11%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   +  +     +S ++V  W   Y    +    +              D +      
Sbjct: 1   MDIQRSILIVALAVVSYLMVLQWNEDYGQAALPAEVSSSTAATPALPDTPADTASTGGDD 60

Query: 59  DDRAQA-----------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
              A A            +    + +K   L  +I+ +G     L L  Y          
Sbjct: 61  IPTAVAEPTAAAVAPTAAASDELIRVKTDVLDLAIDPRGGDIVQLRLPQYPRRQDRPDVP 120

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV---FKNAN 164
             L   + ++  Y A+   +   N  +  +   +W+              LV     + N
Sbjct: 121 FQLF-DNGSERTYLAQSGLIGQ-NAPDKSSGRALWSSEKQSYEMADGQDSLVVDLTYSEN 178

Query: 165 NILFERTISLDE----------------------HYLFKIVDTVTNNSIDQIRFSPRGRI 202
            + + +  S                          Y   +   + N S      +   ++
Sbjct: 179 GVSYIKRYSFKRGLNPQCSAREQQLKKPGCVDPSAYQVDVRYLIDNQSDQAWSGNLFAQL 238

Query: 203 MRHKPQT----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKY 258
            R                  G      D+   +    DI+K S         W+     Y
Sbjct: 239 KRDNSGDPSSTTATGTATYLGAALWTSDEPYKKVSMKDIDKQSFKET-VQGGWVAWLQHY 297

Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318
           + + ++PSK+++   Q +   D    Y   F+   + +  G    T   L+AG K    +
Sbjct: 298 FVTAWVPSKDSTNLVQTR--KDSQGNYIVGFTGPAVQVAAGAQGETGAILYAGPKLQEHL 355

Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378
                    P  E+ +D+G+ +F+A+P+F L+   + L+GN+G +I++ T+ +KL+FFPL
Sbjct: 356 GKLS-----PGLELTVDYGFLWFLAQPIFWLLEVIHGLLGNWGWSIIVLTIIIKLIFFPL 410

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438
           +   Y S A M+ + PK+  L+E+      Q + +AM++LYK   INPL GC PIL+Q+P
Sbjct: 411 SAASYRSMARMRAVSPKLQALKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMP 469

Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           VF A+Y V+  S+EMR AP+  WI DL+  DP                     I PIIM 
Sbjct: 470 VFLALYWVLLESVEMRQAPWMFWITDLSIKDPFF-------------------ILPIIMG 510

Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            +MFIQ +++P P D  QA +L  MP++F F    FPAGL++YW  +N++SI QQ  I +
Sbjct: 511 ATMFIQQQLNPTPPDPMQARVLKLMPIIFTFFFLWFPAGLVLYWVVNNILSIGQQWYITR 570

Query: 559 MHGA 562
              A
Sbjct: 571 KIEA 574


>gi|269962686|ref|ZP_06177031.1| inner membrane protein, 60 kDa [Vibrio harveyi 1DA3]
 gi|269832609|gb|EEZ86723.1| inner membrane protein, 60 kDa [Vibrio harveyi 1DA3]
          Length = 540

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 140/570 (24%), Positives = 244/570 (42%), Gaps = 42/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         E+    +        +    V    
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQAVEQAQSSSTLPAPSFADDLDPVPGQQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           +A A      + +    L  SI+  G      +L  Y  ++ S+ P V L       + +
Sbjct: 60  QASA----KTITVTTDVLTLSIDTVGGDVVHADLNKYAAELDSSDPFVLLKDTKG--HQF 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V          +   +N+ +             + + F        +  +    
Sbjct: 114 IAQSGLVGPQGIDLSSTNRPHYNVSADSFTLADGQDELRVPMTFTANGIEYIKTYVFKRG 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   V NNS +   F     + ++      + T     G      D    +  + 
Sbjct: 174 SYALNVEYDVVNNSGNNATFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDVRYKKYSFE 233

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S        W  +   Y+A+ +IP  E   +   + + +              
Sbjct: 234 DMQDRNLSINLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMPNK 290

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+  L+++  
Sbjct: 291 TIATGDQAKFEATLWVGPKLQNEMAAVA-----PNLDLVVDYGWLWFIAKPLHSLLAFIQ 345

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC P++LQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 405 MMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 535


>gi|183597176|ref|ZP_02958669.1| hypothetical protein PROSTU_00419 [Providencia stuartii ATCC 25827]
 gi|188023490|gb|EDU61530.1| hypothetical protein PROSTU_00419 [Providencia stuartii ATCC 25827]
          Length = 549

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 147/571 (25%), Positives = 267/571 (46%), Gaps = 51/571 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      ++   + K +QT +Q +   +   AV    
Sbjct: 1   MDSQRNLLL-IALLFVSFLVWQAW----ESDKAAQDLKTVQTTQQTDMPSSDSQAVT--- 52

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS-PSNTKNA 119
              +      + +K   L   IN +G   D+ +L  Y   + S SP   L + P     A
Sbjct: 53  ---SSGQGKLITVKTDVLDLRINTRGGDIDEADLLAYPATLHSESPFRLLETTPDFIYQA 109

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD 175
               +      N         V+++ S   +         + + F + N +++++T  L 
Sbjct: 110 QSGLIGQHGPDNPDNSNGQRPVYSVESSSFILADGQDELRVPMTFTDKNGVVYQKTYVLK 169

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
             HY   +   + N +   +  +  G++ +      +  T ++ F +     A       
Sbjct: 170 RGHYNVDVEYNIQNPTAQALNLAFFGQLKQTIQLPKERDTGSSNFALHTYRGAAYSSDES 229

Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             +KY     +    N      W+ +  +Y+A+ ++P+     +S F  +  G       
Sbjct: 230 NYKKYSFSDIEDKKLNVTTKGGWVAMLQQYFATAWVPASNE--NSTFYTIDLGQKEAIIG 287

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
           + +  +TI    + T ++ L+ G +    +         P  ++ +D+GW +FI++P+F 
Sbjct: 288 YKSQPLTIAANGAGTYSSTLWVGPEIQSEMAEVA-----PHLDLTVDYGWLWFISQPLFK 342

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+ + +  VGN+GIAI++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      
Sbjct: 343 LLKFIHGFVGNWGIAIIIITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK- 401

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q + + M+ LYK   +NPL GC P+L+Q+P+F A+Y ++  S+E+RHAPF+GWI+DL+A 
Sbjct: 402 QRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFFGWIQDLSAQ 461

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527
           DP                     I P++M ++MF+  KMSP    D  Q  I+ +MPVVF
Sbjct: 462 DPYY-------------------ILPVLMGVTMFVIQKMSPTAVTDPMQQKIMTYMPVVF 502

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                 FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 503 TIFFLWFPSGLVLYYIVSNLVTIIQQQIIYR 533


>gi|300115605|ref|YP_003762180.1| membrane protein insertase [Nitrosococcus watsonii C-113]
 gi|299541542|gb|ADJ29859.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Nitrosococcus watsonii C-113]
          Length = 545

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 142/568 (25%), Positives = 250/568 (44%), Gaps = 40/568 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFY-------VYPRIEEMNNERKNIQTVKQPNQVDNSYA 54
             N+   +  AL +++   W  +        + P   +                 D    
Sbjct: 1   MENYRLILFSALVLVLFLMWDAWQTDYGPIPLIPPPPQPAASSGESSPAPPEAVPDAPLP 60

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
            V   D A  L     +E+K   L   I +      ++ L  Y + +   +  VTLL   
Sbjct: 61  EVADMDTAPILPDQKTIEVKTDLLAIKIGMASGDLYEVQLLNYPVSLKEPNKPVTLLHKR 120

Query: 115 NTKNAYFAELDYVSTAN---NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           +  + +  +    + +      E    +                + L +++ N I   +T
Sbjct: 121 D-PDLFVTQSGLRAASGPSITHEKVQFSAPKTHYELIEDEGILKVPLTWEDENGIKVTKT 179

Query: 172 ISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230
                + Y   +   + N +          +  R  P++         G +    ++   
Sbjct: 180 YLFRRDSYQIDLNIKIENGTDQAWMGRAYAQFSRTPPESGGMFARSYVGAVFSTNEQEYQ 239

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
           +  + D+   S         W+ +   Y+ + ++P ++ + +   K++ +   RY     
Sbjct: 240 KVDFGDLASKSFDR-RSPGGWVAMIQHYFVAAWVPREQGTNYYYGKHVQNS--RYIVGVM 296

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
             + TI PG+S      LF G K    +         P+  + +D+G    +A+P+F LM
Sbjct: 297 PPQQTIAPGESGQFNLALFTGPKIQDRLAVVA-----PKLNLTVDYGKLTILAEPLFWLM 351

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
           S+F+NLVGN+G AI+L T  VKL+FF L++  Y S A M+ +QP++  L+E++     Q 
Sbjct: 352 SWFHNLVGNWGWAIVLLTFVVKLVFFKLSQTSYRSMARMRKLQPRLLALKERYGD-DRQK 410

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           + +AM++LY+   +NP+ GC PI++QIPVF A+Y ++  S+E+R APF  WI+DL + DP
Sbjct: 411 VGQAMMELYRKEKVNPMGGCLPIVVQIPVFIALYWMLLESVELRQAPFIFWIQDLTSKDP 470

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I P++M +SMF+Q K+SP P D  QA ++  MPV+F   
Sbjct: 471 YY-------------------ILPLLMGVSMFVQQKLSPAPTDPIQAKVMALMPVMFTVF 511

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              FPAGL++YW  +N++SI QQ  I +
Sbjct: 512 FVMFPAGLVLYWVVNNILSIAQQWYITR 539


>gi|167626216|ref|YP_001676510.1| 60 kDa inner membrane insertion protein [Shewanella halifaxensis
           HAW-EB4]
 gi|189036362|sp|B0TQH1|OXAA_SHEHH RecName: Full=Inner membrane protein oxaA
 gi|167356238|gb|ABZ78851.1| 60 kDa inner membrane insertion protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 544

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 136/566 (24%), Positives = 238/566 (42%), Gaps = 40/566 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           ME   N  + I L  +    WQ +     P+       + +I      +   +       
Sbjct: 1   MESQRN-ILLIGLLFVSFLLWQQWQADQAPQPVAAAQTQSSIPASTVADSHSSDVPDADS 59

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                  +    + +    L   I+  G       L  + L+ + + P V L   ++   
Sbjct: 60  AVPEAITASKELITVFTDQLEIKIDPVGGDIVYSALLSHKLEENGDDPFVLLEQTNDIY- 118

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISL 174
            Y A+   +              ++  S +        T  + L + +   + + ++   
Sbjct: 119 -YIAQSGLIGRDGIDSSVKGRAHFDSASREYKLADGQDTLSVPLTYVSDKGVTYTKSFVF 177

Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
               Y   +   + N S   ++    G+I     ++ ++         A   D    E+ 
Sbjct: 178 TRGKYNIAVDYKINNTSDASLQVQMYGQIKHSIKKSESSMMMPTYLGGAFSTDDIRYEKY 237

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
             D       +      W+ +   Y+ S ++P             +         F    
Sbjct: 238 SFDDMADKNLDDSTLGGWVAMLQHYFVSAWVPPATEKNIIFSSMKNGLAN---IGFRGEL 294

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
             I PG      +  + G K+   +         P   +++D+G+ +++A P++ L+ +F
Sbjct: 295 HDIAPGSEQVIKSEFYVGPKDQKALSVLS-----PSLNLVVDYGFLWWLAVPIYKLLMFF 349

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           +++VGN+G AI+L T+ V+ L +PL K QY S A M+N+QPK+ EL+E+F     Q + +
Sbjct: 350 HSIVGNWGFAIILITLTVRGLLYPLTKAQYTSMAKMRNLQPKLAELKERFGD-DRQKMGQ 408

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
           AM++LYK   +NP+ GC PILLQ+P+F A+Y V+  S+E+RHAPF  WI DL+  DP   
Sbjct: 409 AMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQDPYY- 467

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFAL 531
                             + PI+M +SMF+  KM P  P  D  Q  ++ WMPV+F    
Sbjct: 468 ------------------VLPILMGISMFVMQKMQPMAPTMDPMQVKMMQWMPVIFTVFF 509

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIM 557
             FPAGL++YW   N+++I QQ +I 
Sbjct: 510 LWFPAGLVLYWLVGNLVAITQQKIIY 535


>gi|290477350|ref|YP_003470271.1| preprotein translocase cooperates with SecYEG and SecDFyajC
           translocon membrane protein [Xenorhabdus bovienii
           SS-2004]
 gi|289176704|emb|CBJ83513.1| preprotein translocase, cooperates with SecYEG and SecDFyajC
           translocon, membrane component [Xenorhabdus bovienii
           SS-2004]
          Length = 537

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 133/574 (23%), Positives = 242/574 (42%), Gaps = 56/574 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      E+  N +   Q  +Q N             
Sbjct: 1   MDSQRNL-LFIALLFVSFLVWQAW------EKDQNPQPTAQITQQAN----------TPS 43

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              +      + +K   L   IN +G   ++ +L  Y   + SN P   L   S  +  Y
Sbjct: 44  SEASSGQGKLITVKTDVLSLHINTRGGDIEEADLLAYPDTLGSNKPFKLL--ESTPEFIY 101

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTP----IKLVFKNANNILFERTISLDE 176
            A+     T       +           +L                   +  +  I    
Sbjct: 102 QAQSGLTGTNGPDNQADRPFYHTTQDSYVLADGQNELRIPMTYTAPDGVVYVKTFILKRG 161

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVE 231
           +Y   +   + N +   ++ +  G++ +         T ++ F +     A         
Sbjct: 162 NYAVSVDYNIDNVTDKPLQMAFFGQLKQSVELPKSRDTGSSNFALHTYRGAAYSSAEAKY 221

Query: 232 QKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
           +KY     +        +  W+ +  +Y+A+ ++P   ++    +             + 
Sbjct: 222 EKYKFGDIEDKALAVTTNGGWVAMLQQYFATAWVPGANSTNTF-YTIDLKNQKMAIIGYK 280

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
              + I P      ++ L+ G +    +         P  ++ +D+GW +FI++P+F L+
Sbjct: 281 GETVNIAPNSKQNISSTLWVGPEIQDKMAEVA-----PHLDLTVDYGWLWFISQPLFKLL 335

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
            + +  +GN+G +I+  T  V+ + +PL K QY S A M+ +QPKI  +RE+      Q 
Sbjct: 336 KFLHEFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRLLQPKITAMRERHGD-DRQR 394

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           + + M+ LYKT  +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF GWI+DL+A DP
Sbjct: 395 MSQEMMALYKTEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFIGWIEDLSAQDP 454

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529
                                I P++M  +MF+  K+SP    D  Q  I+ +MPV+F  
Sbjct: 455 YY-------------------ILPLLMGATMFVIQKLSPTTVTDPMQQKIMTYMPVMFTV 495

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
               FP+GL++Y+  SN+++I+QQ VI +     
Sbjct: 496 FFLWFPSGLVLYYIVSNLVTIIQQQVIFRSLEKR 529


>gi|24371604|ref|NP_715646.1| inner membrane protein, 60 kDa [Shewanella oneidensis MR-1]
 gi|38503016|sp|Q8EKT6|OXAA_SHEON RecName: Full=Inner membrane protein oxaA
 gi|24345354|gb|AAN53091.1|AE015452_4 inner membrane protein, 60 kDa [Shewanella oneidensis MR-1]
          Length = 541

 Score =  344 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 139/564 (24%), Positives = 238/564 (42%), Gaps = 39/564 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +      + +  E   +      +  D   A   +  
Sbjct: 1   MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANATTNHSADVPEADTGVP- 58

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            A   +    + +K   L   IN  G       L  + L+   + P V L    +    Y
Sbjct: 59  -AAVAATQNLITVKTDQLDVQINPVGGDIVYAALVSHKLEQGKDQPFVLLEQTKD--FTY 115

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175
            A+   +             ++     +        +  + L +   N + + +      
Sbjct: 116 IAQSGLIGRDGIDSSAKGRAIFAASKTEFTLADGQDSLEVPLTYVAENGVTYTKVFVFHR 175

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             +   I   + N S   ++    G+I +    + ++         A        E+   
Sbjct: 176 GKFNVNIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTASVRYEKYNF 235

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           +    +  N      W  +   Y+ S +IP    S        + G A     F      
Sbjct: 236 EDMGKNNLNQPTIGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRGAVYD 293

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           + PG +   ++  + G K+   +             +++D+G+ +++A P+  L+ ++ +
Sbjct: 294 VAPGATQEISSQFYVGPKDQKALSALSDT-----LNLVVDYGFLWWLAVPIHWLLMFYQS 348

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F     Q + +AM
Sbjct: 349 FVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGD-DRQKMGQAM 407

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NP+ GC PILLQ+P+F A+Y V+  S E+RHAPF  WI DL+  DP     
Sbjct: 408 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYY--- 464

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533
                           I P++M +SMFI  KM P  P  D  Q  ++ WMPV+F      
Sbjct: 465 ----------------ILPLLMGVSMFIMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLW 508

Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557
           FP+GL++YW   N+++I+QQ +I 
Sbjct: 509 FPSGLVLYWLVGNIVAIIQQKIIY 532


>gi|156972771|ref|YP_001443678.1| putative inner membrane protein translocase component YidC [Vibrio
           harveyi ATCC BAA-1116]
 gi|166977424|sp|A7N0X9|OXAA_VIBHB RecName: Full=Inner membrane protein oxaA
 gi|156524365|gb|ABU69451.1| hypothetical protein VIBHAR_00436 [Vibrio harveyi ATCC BAA-1116]
          Length = 540

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 138/570 (24%), Positives = 244/570 (42%), Gaps = 42/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         E+    +        +    V    
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQAVEQAQSSSTLPAPSFADELDPVPGQQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           +A A      + +    L  SI+  G      +L  Y  ++ S+ P V L       + +
Sbjct: 60  QASA----KTITVTTDVLTLSIDTVGGDVVHADLNKYSAELDSSDPFVLLKDTKG--HQF 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V          +   + + +             + + F        +  +    
Sbjct: 114 IAQSGLVGPQGIDLSSTNRPHYKVSADSFTLADGQDELRVPMTFTANGIEYIKTYVFKRG 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   V NNS +   F     + ++      + T     G      D    +  + 
Sbjct: 174 SYALNVEYDVVNNSGNNATFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDVRYKKYSFE 233

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S        W  +   Y+A+ +IP  E   +   + + +              
Sbjct: 234 DMQDRNLSINLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMPNK 290

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +    ++      ++++D+GW +FIAKP+  L+++  
Sbjct: 291 TIATGDQAKFEATLWVGPKLQNEMAAVAEN-----LDLVVDYGWLWFIAKPLHSLLAFIQ 345

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC P++LQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 405 MMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 535


>gi|292493917|ref|YP_003529356.1| hypothetical protein Nhal_3959 [Nitrosococcus halophilus Nc4]
 gi|291582512|gb|ADE16969.1| 60 kDa inner membrane insertion protein [Nitrosococcus halophilus
           Nc4]
          Length = 554

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 153/584 (26%), Positives = 268/584 (45%), Gaps = 53/584 (9%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFY----------------VYPRIEEMNNERKNIQTVKQ 45
             N+  F+  AL +++   W  +                      +      + +   + 
Sbjct: 1   MENYRLFLFSALILVLFLMWDAWQTDYGPIPLMPPPPQQPSASLKDSSPALPEEVPDAQL 60

Query: 46  PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
           P  V  +    + D     +     +E+K   L   I +      ++ L  Y + +   +
Sbjct: 61  PEGVPGTTPPEMADMDTTPIQPGQTIEVKTDLLTVKIEMASGDLYEVQLLDYPVSLKKPN 120

Query: 106 PIVTLLSPSN-----TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
             V+LL  ++     T++   A      T    +   S   + L+ G+    +  + L +
Sbjct: 121 EPVSLLHQADPDLFVTQSGLRAVSGPSVTHETAQFSASKAYYELVPGE---DSLVVPLTW 177

Query: 161 KNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
           ++ N I   +T     + Y   +   + N +       P  + +R  P++ +       G
Sbjct: 178 EDENGIKVTKTYIFHRDSYEVDLKLKIENGTDQVWTGRPYAQFIRTPPKSDSFFVRSYIG 237

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
            +    +    +  + D+   S    H S  W  +   Y+ + +IP +E S +   K++ 
Sbjct: 238 AVFSTEENEYQKVDFGDLASQSFER-HSSGGWAAMLQHYFVAAWIPREEGSNYYYGKHVR 296

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
               RY A    ++ T+ PG++      LFAG K    +         P+  + +D+G  
Sbjct: 297 GS--RYIAGVMPSQQTVAPGENGEFNLSLFAGPKIQDRLAATA-----PKLNLTVDYGKL 349

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             +A+P+F LMS+F++LVGN+G AI+L TV VKL+FF L++  Y S A M+ +QP++  L
Sbjct: 350 TILAEPLFWLMSWFHSLVGNWGWAIVLLTVVVKLIFFKLSQTSYRSMARMRKLQPQLLAL 409

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +E+      ++  +AM++LY+   +NP+ GC PIL+QIPVF A+Y ++  S+E+RHAPF 
Sbjct: 410 KERHGDDRHKM-GQAMMELYRKEKVNPMGGCLPILVQIPVFIALYWMLIESVELRHAPFV 468

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            WI+DL A DP                     I P++M +SMF+Q K+SP P D  QA +
Sbjct: 469 FWIQDLTAKDPYY-------------------ILPLLMGVSMFVQQKLSPAPTDPIQAKV 509

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           ++ MPV+F      FPAGL++YW  +N++SI QQ  I +    E
Sbjct: 510 ISLMPVMFTIFFVLFPAGLVLYWVVNNILSIAQQWYITRQIEKE 553


>gi|126176561|ref|YP_001052710.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS155]
 gi|153002875|ref|YP_001368556.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS185]
 gi|217975463|ref|YP_002360214.1| YidC translocase/secretase [Shewanella baltica OS223]
 gi|304412702|ref|ZP_07394305.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Shewanella baltica OS183]
 gi|307305833|ref|ZP_07585579.1| membrane protein insertase [Shewanella baltica BA175]
 gi|166977414|sp|A3DAS8|OXAA_SHEB5 RecName: Full=Inner membrane protein oxaA
 gi|166977415|sp|A6WUK4|OXAA_SHEB8 RecName: Full=Inner membrane protein oxaA
 gi|254778161|sp|B8EDW5|OXAA_SHEB2 RecName: Full=Inner membrane protein oxaA
 gi|125999766|gb|ABN63841.1| protein translocase subunit yidC [Shewanella baltica OS155]
 gi|151367493|gb|ABS10493.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS185]
 gi|217500598|gb|ACK48791.1| YidC translocase/secretase [Shewanella baltica OS223]
 gi|304348912|gb|EFM13327.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Shewanella baltica OS183]
 gi|306911326|gb|EFN41752.1| membrane protein insertase [Shewanella baltica BA175]
          Length = 541

 Score =  343 bits (880), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 141/564 (25%), Positives = 239/564 (42%), Gaps = 39/564 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +      + +  E   +      +  D   A   +  
Sbjct: 1   MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSLVANAANSHSADVPEADTGVP- 58

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            A   + S  + +K   L   IN  G       L  + ++   + P V L    +    Y
Sbjct: 59  -AAVTATSKLITVKTDQLDVQINPIGGDIVFAALVSHKMEQDKDQPFVLLEQTKD--FTY 115

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175
            A+   +              ++  + +        T  + L +   N + + +      
Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFSTAATEYTLAEGQDTLEVPLTYVADNGVTYTKVFVFHR 175

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             +   +   + N S   ++    G+I +    + ++         A        E+   
Sbjct: 176 GKFNVDVDYKINNTSAAPLQVQMYGQIKQTIKPSESSMVMPTYRGGAFSTQDVRYEKYKF 235

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D    S  N      W  +   Y+ S +IP    S        + G A     F      
Sbjct: 236 DDMAKSNLNQATLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRGAVYD 293

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I PG +   ++  + G K+   +             +++D+G+ +++A P+  L+ ++ +
Sbjct: 294 IAPGATQEISSQFYVGPKDQKALSAISDT-----LNLVVDYGFLWWLAVPIHWLLMFYQS 348

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F     Q + +AM
Sbjct: 349 FVGNWGMAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLTDLKERFGD-DRQKMGQAM 407

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NP+ GC PI+LQ+P+F A+Y V+  S E+RHAPF  WI DL+  DP     
Sbjct: 408 MELYKKEKVNPMGGCLPIILQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYY--- 464

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533
                           I P++M +SMF+  KM P  P  D  Q  ++ WMPV+F      
Sbjct: 465 ----------------ILPLLMGVSMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLW 508

Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557
           FPAGL++YW   N+++I QQ +I 
Sbjct: 509 FPAGLVLYWLVGNIVAITQQKIIY 532


>gi|315634811|ref|ZP_07890093.1| YidC/Oxa1 family membrane protein insertase [Aggregatibacter segnis
           ATCC 33393]
 gi|315476363|gb|EFU67113.1| YidC/Oxa1 family membrane protein insertase [Aggregatibacter segnis
           ATCC 33393]
          Length = 542

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 146/569 (25%), Positives = 247/569 (43%), Gaps = 41/569 (7%)

Query: 1   MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+          + +S I+   WQ  Y  P+   +  E+    T   P    N+      
Sbjct: 1   MDSRRGLLVIALLFMSFIVYQQWQLDYHTPKP--VATEQTVTSTSDVPASSGNNTVIAT- 57

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                       + L+N      IN  G       L  Y  ++ SN P V L   +  ++
Sbjct: 58  ----DTQVKGKVITLENDVFRLKINTLGGDVISSELLKYDAELDSNMPFVLL--QNTPEH 111

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTISLD 175
            Y A+   +                      L          LV++       +  +   
Sbjct: 112 VYIAQSGLIGKDGIDTKAGRADYQVEGENFKLADGQNELIVPLVYQKEGVTYRKIFVLKR 171

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             Y   +   ++N S   I   P G++      ++ +         A    ++  ++   
Sbjct: 172 GEYDIAVNYEISNQSDKTIEVEPYGQLRHTLVDSSGSVAMPTYTGGAYSSSETNYKKYSF 231

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
              +++  + +    W+ +   Y+ S +IP+++                    +    + 
Sbjct: 232 SDMENANLSVNTKAGWVAVLQHYFVSAWIPNQDADNQLYTLTDKAN-NIGSIGYRGPVVA 290

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I P  +   T+ L+ G K    +            ++ +D+GW +FIAKP+F L+++   
Sbjct: 291 IQPNTTEKLTSKLWTGPKLQNEMAQVAD-----HLDLTVDYGWAWFIAKPLFWLLTFIQQ 345

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           LV N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M
Sbjct: 346 LVHNWGVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERF-GEDRQRMSQEM 404

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NPL GC P+LLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP     
Sbjct: 405 MKLYKDEKVNPLGGCLPLLLQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY--- 461

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534
                           I PI+M  SMF+  KMSP P AD  Q  I+N+MP++F+     F
Sbjct: 462 ----------------ILPILMGASMFLLQKMSPTPVADPMQQKIMNFMPLIFMVFFLWF 505

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           PAGL++YW  SN+I+I+QQ +I +    +
Sbjct: 506 PAGLVLYWLVSNLITIIQQQLIYRGLEKK 534


>gi|251791812|ref|YP_003006533.1| putative inner membrane protein translocase component YidC [Dickeya
           zeae Ech1591]
 gi|247540433|gb|ACT09054.1| 60 kDa inner membrane insertion protein [Dickeya zeae Ech1591]
          Length = 543

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 147/570 (25%), Positives = 252/570 (44%), Gaps = 52/570 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      E   N     QT +  N      A   +  
Sbjct: 1   MDSQRNLLL-IALLFVTFMIWQQW------ETDKNPPAATQTTQLANSAVGDAANQGVP- 52

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   ++ +L  Y  ++SS+ P   L   +     Y
Sbjct: 53  ---ASGQGKLITVKTDVLSLNINTRGGDIEEADLLAYPAELSSSQPFKLL--ETTPAFTY 107

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N +      S              I L + +AN + F +T  L 
Sbjct: 108 QAQSGLTGKNGPDNPANGSRPLYTASADRFELPAGQNELRIPLTYTDANGVSFTKTFVLK 167

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
              Y   +  +V N S   +  +  G++ +         T +N F +     A       
Sbjct: 168 RGEYALNVEYSVNNASAQPLELALFGQLKQSIDLPSHRDTGSNNFALHTYRGAAFSSSED 227

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
             +KYS  +     N +    W+ +  +Y+A+ ++P+   +    F   + G+      F
Sbjct: 228 KYRKYSFSDMKENLNINTQGGWVAMLQQYFATAWVPTAAANNT--FYSANLGNGLAAIGF 285

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            A  + + PG        L+ G +    +         P  ++ +D+GW +FI++P+F L
Sbjct: 286 KAAPVIVQPGSQQNLNATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKL 340

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + + +  +GN+G +I+  T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q
Sbjct: 341 LKFLHGFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK-Q 399

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A D
Sbjct: 400 RMSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528
           P                     + PI+M L+MF   KMSP    D  Q  I+ +MPV+F 
Sbjct: 460 PYY-------------------VLPILMGLTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 500

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                FP+GL++Y+  SN+++I QQ +I +
Sbjct: 501 VFFLWFPSGLVLYYIVSNLVTIAQQQMIYR 530


>gi|110835614|ref|YP_694473.1| inner membrane protein [Alcanivorax borkumensis SK2]
 gi|123149157|sp|Q0VKU7|OXAA_ALCBS RecName: Full=Inner membrane protein oxaA
 gi|110648725|emb|CAL18201.1| inner membrane protein, 60 kDa, putative [Alcanivorax borkumensis
           SK2]
          Length = 582

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 156/604 (25%), Positives = 252/604 (41%), Gaps = 74/604 (12%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYV---YPRIEEMNNERKNIQTVKQPN-------- 47
           ME      +     +S +++ AWQ  Y     P   E   E+ N  +    +        
Sbjct: 1   MEIQRALVITGIAVVSYLMIQAWQRDYANTASPVPVEQVAEQGNSSSSDSADLPSVQSQT 60

Query: 48  -------QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
                  Q DN   +V   D AQ    S R+E+    L   IN  G     L L  Y   
Sbjct: 61  DNSIPSAQSDNDLPSVSPADIAQPTPSSQRIEVNTDVLRVEINPVGGDIVRLALPDYPKH 120

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV- 159
           V +      L+      N  +     +   N  +       WN             +L  
Sbjct: 121 VDTPDQPFVLMD--QNSNGTYVAQSGLVGKNGTDSSKGRPHWNSAQQSYRLAEGDNELNV 178

Query: 160 ----FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT---- 211
                +++   + +R       YL ++   V NN       +  G+I R           
Sbjct: 179 DLTLTQDSGAEIIKRYTFEKGSYLIRVSHIVRNNGSTPWTGALYGQIKRDGRDDPGLSKA 238

Query: 212 --NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKE 268
                    G      DK   +  + D+ +  +  +      WL +   Y+ S +IP  +
Sbjct: 239 GFAPMPTYLGAAYWSADKPYNKLTFDDMSEDDVKLDQTVEGGWLAMVQHYFVSAWIPDAK 298

Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328
              H    YL     +Y  +F +   TI PG+     +  +AG K+   +         P
Sbjct: 299 QKNHYSSVYL-KSRDQYLLRFVSPNTTIQPGEESVLYSEFYAGPKQQDNLEAIS-----P 352

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNL--------------VGNFGIAIMLTTVFVKLL 374
              M +D+GW +FI++P+F L+ +  +               VGN+G+AI+L T+ +K +
Sbjct: 353 GLNMTVDYGWLWFISQPIFALLVFLQSGEVSVFGMDIDIGGGVGNWGVAIILLTLIIKAI 412

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434
           FF L+   Y S A M+ + P++  ++E+ K    Q  Q   + L+K   INPL GC P+L
Sbjct: 413 FFKLSATSYRSMAKMRKVAPEMQRIKEQNKNDK-QKQQMETMNLFKREKINPLGGCLPML 471

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+PVF A+Y V+  S+E+R APF+ WI DL+  DP                     + P
Sbjct: 472 VQMPVFIALYYVLLESVELRQAPFFLWINDLSVMDPYF-------------------VLP 512

Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           I+M  SMF+Q +++P PAD  QA ++ WMP++F   +  FPAGL++YW  +N++SI QQ 
Sbjct: 513 ILMGASMFLQTRLNPTPADPTQAQVMKWMPMIFAVFMLWFPAGLVLYWLTNNILSIAQQW 572

Query: 555 VIMK 558
           +I +
Sbjct: 573 IITR 576


>gi|254230607|ref|ZP_04923966.1| inner membrane protein OxaA [Vibrio sp. Ex25]
 gi|262392790|ref|YP_003284644.1| OxaI/YidC membrane insertion protein [Vibrio sp. Ex25]
 gi|151936867|gb|EDN55766.1| inner membrane protein OxaA [Vibrio sp. Ex25]
 gi|262336384|gb|ACY50179.1| OxaI/YidC membrane insertion protein [Vibrio sp. Ex25]
          Length = 540

 Score =  343 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 144/570 (25%), Positives = 244/570 (42%), Gaps = 42/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + I L+++    +Q + V    E    E+    +        +    V    
Sbjct: 1   MDSQRN-ILLIGLALVSFLLFQQWQVAKNPEPQAVEQAQSSSTLPAPSFADELDPVPGQQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           +A A      + +    L  SI+  G      NL  Y  ++ S+   V L       + +
Sbjct: 60  QASA----KTITVTTDVLTLSIDTVGGDVVHANLNEYSAELDSSDSFVLLKDDQG--HQF 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176
            A+   V          +   +N+ +          +L     F        +  I    
Sbjct: 114 IAQSGLVGPQGIDLSSTNRPHYNVSADSFTMADGQDELRVPMTFTTNGIEYTKTYIFKRG 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   V NNS +   F     + ++      + T     G      D    +  + 
Sbjct: 174 SYALNVEYDVVNNSGNNATFGMYAHLRQNLMDDGGSITMPTYRGGAYSTEDTRYKKYSFD 233

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S        W  +   Y+A+ +IP  E   +   + + +              
Sbjct: 234 DMQDRNLSLNLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMPNK 290

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+ ML+S+  
Sbjct: 291 TIATGDQAKFEATLWVGPKLQDEMAEVA-----PNLDLVVDYGWLWFIAKPLHMLLSFIQ 345

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC P++LQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 405 MMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKGLEKK 535


>gi|301154699|emb|CBW14162.1| cytoplasmic insertase into membrane protein, Sec system
           [Haemophilus parainfluenzae T3T1]
          Length = 542

 Score =  343 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 139/567 (24%), Positives = 254/567 (44%), Gaps = 37/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +              +     +    + ++   +  
Sbjct: 1   MDSRRSLLVLALLFISFLVYQQWQLDKNPPVQQQ---TTEQTTTASSDVPASSSSSAEVV 57

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
           A + +    + L+N      ++  G       L  Y  ++ S  P V L      ++ Y 
Sbjct: 58  ADSQTKGHIITLENDVFRLKVDTLGGDVISSELLKYDAELGSKEPFVLL--KDTNEHVYI 115

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+       + +               + L F+       +  +   + 
Sbjct: 116 AQSGLIG-KNGIDTKAGRAQYQVSGDNFKLAEGQNELSVPLTFEKDGVTYRKIFVLKRDS 174

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A    ++  ++     
Sbjct: 175 YDVGVNFEIVNQSGSAIEVEPYGQLKHTLVESSGNVAMPTYTGGAYSSSETNYKKYSFSD 234

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            K    +      W+ +   Y+ S +IP+++ +    +      +      +    +++ 
Sbjct: 235 MKDKNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YSITDSKNNVASIGYRGPVVSVP 293

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G + T T+ L+ G K    +            ++ +D+GW +FIAKP+F L+++  ++V
Sbjct: 294 AGATETITSSLWTGPKLQNKMAEVAN-----HLDLTVDYGWAWFIAKPLFWLLTFIQSIV 348

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 349 SNWGVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKMQEMRERFGD-DRQRMSQEMMK 407

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC P++LQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 408 LYKEEKVNPLGGCLPLILQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY----- 462

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M  SMF+  KMSP P AD  Q  ++N+MP++F+F    FPA
Sbjct: 463 --------------ILPILMGGSMFLLQKMSPTPVADPMQQKVMNFMPLIFMFFFLWFPA 508

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+IVQQ +I +    +
Sbjct: 509 GLVLYWLVSNLITIVQQQMIYRGLEKK 535


>gi|294638332|ref|ZP_06716585.1| membrane protein insertase, YidC/Oxa1 family [Edwardsiella tarda
           ATCC 23685]
 gi|291088585|gb|EFE21146.1| membrane protein insertase, YidC/Oxa1 family [Edwardsiella tarda
           ATCC 23685]
          Length = 555

 Score =  343 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 139/571 (24%), Positives = 248/571 (43%), Gaps = 56/571 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N F+ +AL  +    WQ +      + +        +      V  S        
Sbjct: 15  MDSQRNLFL-VALLFVSFLIWQAWQTDHNPQPVAQTAGQSVSDAASQAVPESG------- 66

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +K   L  +IN +G   +  +L  Y   + SN+P   L   +  +  Y
Sbjct: 67  ------QGKLITVKTDVLALTINTRGGDIEQADLLAYPATLGSNTPFQLL--ETTPQFIY 118

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+      +      N        +              I L +   N +++ +T  L 
Sbjct: 119 QAQSGLTGKSGPDNPANGPRPLYNANQTSYEMLPGQDELRIPLTYTAPNGVVYTKTFVLK 178

Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
            +     +   V N+S + +  +  G++ +         T ++ F +     A       
Sbjct: 179 RNDYAIAVDYKVKNDSHEALDLTLFGQLKQSVDLPKHRDTGSSNFALHTFRGAAYSSSDD 238

Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             QKY     +    N      W+ +  +Y+A+ +IP       + F   + G+ +    
Sbjct: 239 KYQKYSFSDIEDKNLNVQTKGGWVAMLQQYFATAWIPHDSG--VNTFYTANLGNGQAAIG 296

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
           + A  +++ P      +  L+ G +    +         P  ++ +D+GW +FI++P+F 
Sbjct: 297 YKAPSVSVAPNTEQVLSTTLWVGPELQSDMAAVA-----PHLDLTVDYGWLWFISQPLFK 351

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+   ++ VGN+G AI++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      
Sbjct: 352 LLQLIHSFVGNWGFAIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK- 410

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DLAA 
Sbjct: 411 QRMSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLAAP 470

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527
           DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+F
Sbjct: 471 DPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIF 511

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                 FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 512 TVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 542


>gi|224827183|ref|ZP_03700278.1| 60 kDa inner membrane insertion protein [Lutiella nitroferrum 2002]
 gi|224600576|gb|EEG06764.1| 60 kDa inner membrane insertion protein [Lutiella nitroferrum 2002]
          Length = 550

 Score =  343 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 143/576 (24%), Positives = 241/576 (41%), Gaps = 41/576 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + I LS+ I+  WQ ++          +    QT         + +A      
Sbjct: 1   MDSKRLIIFIVLSMSILLLWQEYFAPKP---TPQQLAKSQTTAGAPGAPAAPSAAAQPAD 57

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
           A  L+   R+ +        I+  G     L+L  ++    ++ P    L        Y 
Sbjct: 58  AAKLTSGQRITVSTDLYKAEIDTVGGDLRRLDLLKHNAAEDASKPFE--LFTDKGGRVYV 115

Query: 122 AELDYVSTANNI-ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179
           A+   V+ +N       +       S ++      +KL    AN +   +  +     Y 
Sbjct: 116 AQTGLVAASNPALPTHKTVFTAEKTSYQMNGDKLEVKLTAPEANGVKVSKVYTFKKGAYD 175

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
             +   ++N+    +  +   R++R    P+          G      D    +  + D+
Sbjct: 176 IDVRYDISNSGSAPVAPTAYFRLLRDGQKPEGEGRFASTFTGPAVYTTDGKFQKVSFDDL 235

Query: 238 EKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFK------YLSDGHARYQAKFS 290
            K          N W+ +   Y+ S +I                   L   +  + A   
Sbjct: 236 TKGKGDYVKSADNGWVSMLQHYFMSAWIIKPLGGQSVCAAGQPCRFELKSSNGLFSAATL 295

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
            +   I PG S + T  L+AG +EF  I            E   D+GW +  A P+F L+
Sbjct: 296 VDLPAIAPGASRSITVPLYAGPEEFDIITKVAD-----GMEYAKDYGWVHIFASPLFWLL 350

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
           +  + LV N+G AI+L T+ VK LF+PL    Y S   MK + P+++ L+E++     ++
Sbjct: 351 TKLHALVNNWGWAIILLTLTVKALFYPLTAASYRSMGKMKALAPRLERLKEQYGDDRMKM 410

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
            Q+A++++YK+  +NPL GC P+++QIPVF  +Y  +  S+E+R AP+  WI DLA  DP
Sbjct: 411 -QQAVMEMYKSEKVNPLGGCLPMVIQIPVFIGLYWSLLASVELRQAPWTLWINDLARPDP 469

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                + P IM+++MF+Q  ++PPPAD  QA ++  MP+ F   
Sbjct: 470 FY-------------------VLPAIMAITMFLQTFLNPPPADPMQAKMMKIMPLAFSAM 510

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
              FPAGL++YW  +NV+SI QQ  I K       L
Sbjct: 511 FFFFPAGLVLYWVVNNVLSIAQQWYINKQIEKAKKL 546


>gi|254427853|ref|ZP_05041560.1| 60Kd inner membrane protein [Alcanivorax sp. DG881]
 gi|196194022|gb|EDX88981.1| 60Kd inner membrane protein [Alcanivorax sp. DG881]
          Length = 582

 Score =  343 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 147/609 (24%), Positives = 244/609 (40%), Gaps = 74/609 (12%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQ---NFYVYPRIEEMNNER---------------KNI 40
           ME      +     +S +++ AWQ        P   E   E+                  
Sbjct: 1   MEIQRALVITGIAVVSYLMIQAWQRDHADSATPVPVEQVAEQGSPSSADSADLPAPQPET 60

Query: 41  QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
           +      Q D         D     + S R+E+    L   IN  G     L L  Y   
Sbjct: 61  ENSIPAAQADGDQPVAPQIDTPDTATSSRRIEVSTDVLRVEINPVGGDIVRLALPDYPKH 120

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV- 159
           + +       +  SN+    +     +   N  +       W+             +L  
Sbjct: 121 IDTPDQPFVFMDQSNS--GTYVAQSGLVGKNGTDSSKGRPHWSSAQQSYQLAEGSNELNV 178

Query: 160 ----FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT---- 211
                ++    + +R       YL ++   V NN       +  G+I R           
Sbjct: 179 DLTLTQDNGAEIIKRYTFEKGSYLVRVSHIVRNNGSSPWTGALYGQIKRDGSDDPGLSTT 238

Query: 212 --NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKE 268
                    G      +K   +  + D+ +  +  +      WL +   Y+ S +IP  +
Sbjct: 239 GFAPMPTYLGAAYWNPEKPYNKLTFDDMSEDGVKLDQTVEGGWLAMVQHYFVSAWIPDAK 298

Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328
              H    YL     +Y  +F +   T+ PG+        +AG K+   +         P
Sbjct: 299 QKNHYSSVYLQ-SRDQYLLRFVSPNTTVQPGEESVLYAEFYAGPKQQDNLEAIS-----P 352

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNL--------------VGNFGIAIMLTTVFVKLL 374
              M +D+GW +FI++P+F L+ +  +               VGN+G+AI+L T  +K +
Sbjct: 353 GLNMTVDYGWLWFISQPIFALLVFLQSGEVSVFGMDIDIGGGVGNWGVAIILLTFIIKAI 412

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434
           FF L+   Y S A M+ + P++  ++E+ K    Q  Q   + L+K   INPL GC P+L
Sbjct: 413 FFKLSATSYRSMAKMRKVAPEMQRIKEQNKNDK-QKQQMETMNLFKREKINPLGGCLPML 471

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+PVF A+Y V+  S+E+R APF+ WI DL+  DP                     + P
Sbjct: 472 VQMPVFIALYYVLLESVELRQAPFFLWINDLSVMDPYF-------------------VLP 512

Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           I+M  SMF+Q +++P PAD  QA ++ WMP++F   +  FPAGL++YW  +N++SI QQ 
Sbjct: 513 ILMGASMFLQTRLNPTPADPTQAQVMKWMPMIFAVFMLWFPAGLVLYWLTNNILSIAQQW 572

Query: 555 VIMKMHGAE 563
           +I +    E
Sbjct: 573 IITRKIENE 581


>gi|300725384|ref|YP_003714723.1| preprotein translocase [Xenorhabdus nematophila ATCC 19061]
 gi|297631940|emb|CBJ92665.1| preprotein translocase, cooperates with SecYEG and SecDFyajC
           translocon, membrane component [Xenorhabdus nematophila
           ATCC 19061]
          Length = 544

 Score =  343 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 132/574 (22%), Positives = 244/574 (42%), Gaps = 55/574 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      E   N +   Q  +Q +             
Sbjct: 1   MDSQRNLLL-IALLFVSFLVWQAW------ESDKNPQPAAQITQQTS---------PTLT 44

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              +      + +K   L   IN +G   ++ +L  Y   + S +P   L   +  +  Y
Sbjct: 45  SEASNEQGKLITVKTDVLSLHINTRGGDIEEADLLAYPDTLGSQTPFKLL--ETTPEFTY 102

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTP----IKLVFKNANNILFERTISLDE 176
            A+                      +  +L                   +  +  +    
Sbjct: 103 QAQSGLTGANGPDNQAERPLYHTTQNSFVLADGQDELRIPMTYTAPDGVVYVKTFVLKRG 162

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVE 231
           +Y   +  ++ N +   ++ +  G++ +         T ++ F +     A         
Sbjct: 163 NYAVSVDYSINNVTDKPLQMAFFGQLKQSVDVPKHRDTGSSNFALHTYRGAAYSSDEAKY 222

Query: 232 QKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
           +KY  D  +S          W+ +  +Y+A+ ++P +  + +  +             + 
Sbjct: 223 EKYKFDEIESKALAVTTKGGWVAMLQQYFATAWVPGEGKTSNF-YTIDLKNQKMAIIGYK 281

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
              I I P      ++ L+ G +    +         P  ++ +D+GW +FI++P+F L+
Sbjct: 282 GENINIAPNSQQNISSTLWVGPEVQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLL 336

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
            + +  +GN+G +I+  T  V+ + +PL K QY S A M+ +QPKI  +RE+F     Q 
Sbjct: 337 KFLHEYIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRLLQPKITAMRERFGD-DRQR 395

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           + + M+ LYKT  +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF GWI DL+A DP
Sbjct: 396 MSQEMMALYKTEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFIGWINDLSAQDP 455

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529
                                I P++M ++MF+  K+SP    D  Q  I+ +MPV+F  
Sbjct: 456 YY-------------------ILPLLMGVTMFVIQKLSPTTVTDPMQQKIMTYMPVMFTV 496

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
               FP+GL++Y+  SN+++I+QQ VI +     
Sbjct: 497 FFLWFPSGLVLYYIVSNLVTIIQQQVIFRSLEKR 530


>gi|120600874|ref|YP_965448.1| 60 kDa inner membrane insertion protein [Shewanella sp. W3-18-1]
 gi|146295080|ref|YP_001185504.1| 60 kDa inner membrane insertion protein [Shewanella putrefaciens
           CN-32]
 gi|166977417|sp|A4YCM2|OXAA_SHEPC RecName: Full=Inner membrane protein oxaA
 gi|166977419|sp|A1RQE9|OXAA_SHESW RecName: Full=Inner membrane protein oxaA
 gi|120560967|gb|ABM26894.1| protein translocase subunit yidC [Shewanella sp. W3-18-1]
 gi|145566770|gb|ABP77705.1| protein translocase subunit yidC [Shewanella putrefaciens CN-32]
 gi|319428593|gb|ADV56667.1| inner membrane insertase, YidC [Shewanella putrefaciens 200]
          Length = 541

 Score =  343 bits (878), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 142/564 (25%), Positives = 240/564 (42%), Gaps = 39/564 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +      + +  E   +  V   +  D   A   +  
Sbjct: 1   MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSLVANVASTHSADVPEADTGVPA 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L   IN  G       L  + ++     P V L    +    Y
Sbjct: 60  AVAASKN--LITVKTDQLDVQINPVGGDIVFAALVSHKMEQGKEQPFVLLEQTKD--YTY 115

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175
            A+   +         N    +   + +        T  + L +   N + + +      
Sbjct: 116 IAQSGLIGRDGIDSSANGRAAFTTSATEFTLAEGQDTLEVPLTYVADNGVTYTKVFVFHR 175

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             +   +   + N S   ++    G+I +    + ++         A   +    E+   
Sbjct: 176 GKFNVDVDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGGAFSTNDVRYEKYNF 235

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D    S  N      W  +   Y+ S ++P    S        + G A     F      
Sbjct: 236 DDMAKSNLNQATLGGWAAMLQHYFVSAWVPPATDSNTIFSSVSAGGLAN--IGFRGAVYD 293

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I PG S   ++  + G K+   +    +        +++D+G+ +++A P+  L+ ++ +
Sbjct: 294 IAPGASQEISSQFYVGPKDQAALSAISET-----LNLVVDYGFLWWLAVPIHWLLMFYQS 348

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F     Q + +AM
Sbjct: 349 FVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLADLKERFGD-DRQKMGQAM 407

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NP+ GC PI+LQ+P+F A+Y V+  S E+RHAPF  WI DL+  DP     
Sbjct: 408 MELYKKEKVNPMGGCLPIILQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYY--- 464

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533
                           I P++M +SMFI  KM P  P  D  Q  ++ WMPV+F      
Sbjct: 465 ----------------ILPLLMGVSMFIMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLW 508

Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557
           FP+GL++YW   N+++I+QQ +I 
Sbjct: 509 FPSGLVLYWLVGNIVAIIQQKIIY 532


>gi|51244707|ref|YP_064591.1| hypothetical protein DP0855 [Desulfotalea psychrophila LSv54]
 gi|50875744|emb|CAG35584.1| conserved hypothetical membrane protein [Desulfotalea psychrophila
           LSv54]
          Length = 553

 Score =  343 bits (878), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 148/570 (25%), Positives = 253/570 (44%), Gaps = 27/570 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYV----YPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
                  +AI +S  I++ +Q F+       +         N  + KQ   +    A V+
Sbjct: 1   METKRALLAIVISFAILFGYQYFFPGLDQPVQTTSETQTTVNGTSAKQAGAIQEITAPVI 60

Query: 58  IDDRAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
               +      PR + +       +I+  G       L+      + +SP + L++ S T
Sbjct: 61  PVVASAKYDRVPRDIVVDTDLYTATISEAGGALKSFVLKEQKETNAEDSPGMQLVNNSKT 120

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
            + Y     +   A +  L  S                 + +  K++  ++ ER  + D+
Sbjct: 121 -DGYPLTFSWGGAAPSNLLYTSQDSEVRFGSN---GKARLIMTAKSSTGLVIERVYTFDK 176

Query: 177 HYL-FKIVDTVTNNSIDQIRFS-PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
               F +   V N S   ++ S    ++      T  N          V+     + +  
Sbjct: 177 KTYLFDLDVRVVNQSGQALQGSAQLHQVSVPYESTEDNPAARFLFMGPVVYADGELTEID 236

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
               +    +F     WLG   +Y+ S+ +P               G    ++  +    
Sbjct: 237 PKDLEDGPQSFMGDIQWLGYESRYFMSMIVPYGLDGQTFTTS---GGADLTKSFIAGGLD 293

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           T+  G        +  G K+   +     D      +  +++GWF  IAKP   L+++F+
Sbjct: 294 TLAAGAEKEYKYHVLYGPKKVEMLKSAGYD-----LDKAVNFGWFDIIAKPTLWLLNFFH 348

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           +   N+GIAI+L T+  K +F+P+ +K   S  NM+ +QPK+  L+EK K   P  + K 
Sbjct: 349 SFTHNYGIAIILVTIMFKGIFWPITQKGMKSMKNMQKLQPKMAALKEKHKD-DPTRMNKE 407

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           ++ LYK + +NPL GC P++LQIPVFFA+YKV+ +S+E+RHAPF  WI DL+A D   I 
Sbjct: 408 VMSLYKAYKVNPLGGCLPMVLQIPVFFALYKVLLLSIELRHAPFMFWITDLSAPDRLWIG 467

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534
                  F LP    + +  ++M  SMF+Q K SP  AD  QA I+ ++PVVF F   +F
Sbjct: 468 -------FNLPYLGGLPVLTLLMGASMFLQQKFSPTTADPTQAKIMMFLPVVFTFMFLNF 520

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +GL++YW  +N++SI+QQ +I +    + 
Sbjct: 521 ASGLVLYWFVNNLLSILQQVLINRDVKHKT 550


>gi|50123363|ref|YP_052530.1| putative inner membrane protein translocase component YidC
           [Pectobacterium atrosepticum SCRI1043]
 gi|81693013|sp|Q6CYR0|OXAA_ERWCT RecName: Full=Inner membrane protein oxaA
 gi|49613889|emb|CAG77341.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
          Length = 544

 Score =  342 bits (877), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 143/570 (25%), Positives = 253/570 (44%), Gaps = 51/570 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      E   N     QT++Q     N+      + 
Sbjct: 1   MDSQRNLLL-IALLFVTFMLWQAW------ETDKNPPATTQTIQQAT---NAVTGDATNQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +  +L  Y   + S+ P   L   + +   Y
Sbjct: 51  GVPASGQGKLITVKTDVLSLTINTRGGDVEQAHLLAYPDILGSDKPFHLL--ETTSAFVY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N +    + +              I + +  A+ + + +T  L 
Sbjct: 109 QAQSGLTGKNGPDNPANGSRPLFVTTQDSFELADGQSELRIPMTYTAADGVTYTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
              Y   +  +V N S   +  +  G++ +         T +N F +     A       
Sbjct: 169 RGDYALNVDYSVNNTSAQPLELTLFGQLKQSIDLPKHRDTGSNNFALHTYRGAAFSSSED 228

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
             +KYS  +     N   ++ W+ +  +Y+A+ +IP+   +    F     G+ +    F
Sbjct: 229 KYKKYSFSDMDEGLNITTNSGWVAMLQQYFATAWIPTTAGANT--FYTSKLGNGQAAIGF 286

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            A  + I  G        L+ G +    +         P  ++ +D+GW +FI++P+F L
Sbjct: 287 KAAPVIIAAGSQQNLNATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKL 341

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + + +  +GN+G +I+  T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q
Sbjct: 342 LKFLHGFIGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKLQAMRERIGDDK-Q 400

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + + M+ LYK+  +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A D
Sbjct: 401 RMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 460

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528
           P                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+F 
Sbjct: 461 PYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 501

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 VFFLWFPSGLVMYYIVSNLVTILQQQLIYR 531


>gi|269965283|ref|ZP_06179404.1| inner membrane protein, 60 kDa [Vibrio alginolyticus 40B]
 gi|269830084|gb|EEZ84312.1| inner membrane protein, 60 kDa [Vibrio alginolyticus 40B]
          Length = 540

 Score =  342 bits (876), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 144/570 (25%), Positives = 244/570 (42%), Gaps = 42/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + I L+++    +Q + V    E    E+    +        +    V    
Sbjct: 1   MDSQRN-ILLIGLALVSFLLFQQWQVAKNPEPQAVEQAQSSSTLPAPSFADELDPVPGQQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           +A A      + +    L  SI+  G      NL  Y  ++ S+   V L       + +
Sbjct: 60  QASA----KTITVTTDVLTLSIDTVGGDVVHANLNEYSAELDSSDSFVLL--KDAQGHQF 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176
            A+   V          +   +N+ +          +L     F        +  I    
Sbjct: 114 IAQSGLVGPQGIDLSSTNRPHYNVSADSFTMADGQDELRVPMTFTANGIEYTKTYIFKRG 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   V NNS +   F     + ++      + T     G      D    +  + 
Sbjct: 174 SYALNVEYDVVNNSGNNATFGMYAHLRQNLMDDGGSITMPTYRGGAYSTEDTRYKKYSFD 233

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S        W  +   Y+A+ +IP  E   +   + + +              
Sbjct: 234 DMQDRNLSLNLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMPNK 290

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+ ML+S+  
Sbjct: 291 TIATGDQAKFEATLWVGPKLQDEMAEVA-----PNLDLVVDYGWLWFIAKPLHMLLSFIQ 345

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC P++LQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 405 MMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKGLEKK 535


>gi|254496743|ref|ZP_05109602.1| inner membrane protein, 60 kDa [Legionella drancourtii LLAP12]
 gi|254354038|gb|EET12714.1| inner membrane protein, 60 kDa [Legionella drancourtii LLAP12]
          Length = 558

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 144/585 (24%), Positives = 263/585 (44%), Gaps = 44/585 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYV-YPRIEEMNNERKNIQTVKQP-----NQVDNSYA 54
           M+        +AL+++ +  W  + V YP  +       N Q   +P         NS  
Sbjct: 1   MDI-RRIISYMALALVSLSLWNAWQVDYPPQQTTVANSSNQQRTDEPLLPEMGTSGNSAG 59

Query: 55  AVLIDDRAQAL--SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
           A L++  A+      +P V++K   L  +I+L+        L  Y L V   +    LL 
Sbjct: 60  ATLVNPVAEQTRTQSAPLVQVKTDVLNVAIDLQQGDIVSGQLLDYPLSVDEKNKPFPLLQ 119

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFER 170
               +        +++    ++  +          ++        + L  K  +  + + 
Sbjct: 120 DDANERYVANSNLFIAAGQAVKALDFAFTTEQPQYELAANQNQLVVTLNGKEDDLAVSKE 179

Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA----VLGD 226
            I     YL  +   + N    + +     +++R  P+   ++      +        G 
Sbjct: 180 FIFTKGSYLIDVNYKIVNKGSSEWKGYMNTQLLRSSPKEDKSSVFHVGSYTGASYSEPGK 239

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
               +  +SD+ K+++     +  W+ +   Y+ S +IP  +       + ++     Y 
Sbjct: 240 HHYQKVSFSDMGKANLD-VDSNGGWIAMQQHYFLSAWIPDAQGRNKFYTRSINGD---YT 295

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
               +  I + P +  T    L+ G +    +         P  ++ +D+G  +F++  +
Sbjct: 296 IGAVSQPIVVQPQEQKTVGAKLYVGPEITSVLKGIA-----PSLDLTVDYGILWFVSSLL 350

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F LM + YN+VGN+G +I+L TV +KL F+ L+   Y S A M+ +QPK+  LRE++   
Sbjct: 351 FSLMKWIYNVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMAGMRKLQPKLQALRERYGDD 410

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             + + +A ++LYK   +NPL GC PI++QIPVF A+Y V+  S+E+R APF  WIKDLA
Sbjct: 411 KAK-ISQATMELYKQEKVNPLGGCLPIVIQIPVFIALYWVLLESVELRQAPFIFWIKDLA 469

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
           +ADP +                   + P+IM  +M IQ K++P P D  QA ++ ++PV+
Sbjct: 470 SADPFH-------------------VLPLIMGATMLIQQKLNPAPPDPMQAKVMMFLPVL 510

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
           F     +FPAGL++YW  +N +SI+QQ  I + +  E  +   + 
Sbjct: 511 FTGLFWNFPAGLVLYWIVNNTLSILQQWYITRKYADEKPVKKLVA 555


>gi|325577779|ref|ZP_08148054.1| YidC/Oxa1 family membrane protein insertase [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325160524|gb|EGC72650.1| YidC/Oxa1 family membrane protein insertase [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 542

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 139/567 (24%), Positives = 253/567 (44%), Gaps = 37/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +              +     +    + ++   +  
Sbjct: 1   MDSRRSLLVLALLFISFLVYQQWQLDKNPPVQQQ---TTEQTTTASSDVPASSSSSAEVV 57

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
           A + +    + L+N      ++  G       L  Y  ++ S  P V L      ++ Y 
Sbjct: 58  ADSQTKGHIITLENDVFRLKVDTLGGDVISSELLKYDAELGSKEPFVLL--KDTNEHVYI 115

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+       + +               + L  +       +  +   + 
Sbjct: 116 AQSGLIG-KNGIDTKAGRAQYQVTGDNFKLAEGQNELSVPLTLEKDGVTYRKIFVLKRDS 174

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A    ++  ++     
Sbjct: 175 YDVGVNFEIVNQSGSAIEVEPYGQLKHTLVESSGNVAMPTYTGGAYSSSETNYKKYSFSD 234

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            K    +      W+ +   Y+ S +IP+++ +    +      +      +    ++I 
Sbjct: 235 MKDKNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YSITDSKNNVASIGYRGPVVSIP 293

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G + T T+ L+ G K    +            ++ +D+GW +FIAKP+F L+++  ++V
Sbjct: 294 AGATETITSSLWTGPKLQNKMAEVAN-----HLDLTVDYGWAWFIAKPLFWLLTFIQSIV 348

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 349 SNWGVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKMQEMRERFGD-DRQRMSQEMMK 407

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC P++LQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 408 LYKEEKVNPLGGCLPLILQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY----- 462

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M  SMF+  KMSP P AD  Q  ++N+MP++F+F    FPA
Sbjct: 463 --------------ILPILMGGSMFLLQKMSPTPVADPMQQKVMNFMPLIFMFFFLWFPA 508

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  SN+I+IVQQ +I +    +
Sbjct: 509 GLVLYWLVSNLITIVQQQMIYRGLEKK 535


>gi|261823805|ref|YP_003261911.1| inner membrane protein translocase component YidC [Pectobacterium
           wasabiae WPP163]
 gi|261607818|gb|ACX90304.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Pectobacterium wasabiae WPP163]
          Length = 543

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 134/570 (23%), Positives = 242/570 (42%), Gaps = 52/570 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +             +        +  +          
Sbjct: 1   MDSQRNLLL-IALLFVTFMLWQAWETDKNPPATTQAIQQATNAVTGDATNQGVP------ 53

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +  +L  Y   + S+ P   L   +  +  Y
Sbjct: 54  ---ASGQGKLITVKTDVLSLTINTRGGDVEQAHLLAYPDTLGSDKPFHLL--ETTPEFVY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N        +              I + +  A+ + + +T  L 
Sbjct: 109 QAQSGLTGKNGPDNPANGPRPLFTTTQDSFELADGQSELRIPMTYTAADGVTYTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
              Y   +  +V N S   +  +  G++ +         T ++ F +     A       
Sbjct: 169 RGDYALNVDYSVNNTSAQPLELTLFGQLKQSTELPKHRDTGSSNFALHTYRGAAFSSSED 228

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
             +KYS  +     N   ++ W+ +  +Y+A+ +IP+   +        +   A     F
Sbjct: 229 KYKKYSFGDMDEGLNITTNSGWVAMLQQYFATAWIPTTAGANTFFTSKDNGQAA---IGF 285

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            A  + +  G        L+ G +    +         P  ++ +D+GW +FI++P+F L
Sbjct: 286 KATPVVVAAGSQQNLNATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKL 340

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + + +  +GN+G +I+  T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q
Sbjct: 341 LKFLHGFIGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKLQAMRERIGDDK-Q 399

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + + M+ LYK+  +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A D
Sbjct: 400 RMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528
           P                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+F 
Sbjct: 460 PYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 500

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 501 VFFLWFPSGLVMYYIVSNMVTILQQQLIYR 530


>gi|53802852|ref|YP_115424.1| inner membrane protein, 60 kDa [Methylococcus capsulatus str. Bath]
 gi|81680702|sp|Q602M6|OXAA_METCA RecName: Full=Inner membrane protein oxaA
 gi|53756613|gb|AAU90904.1| inner membrane protein, 60 kDa [Methylococcus capsulatus str. Bath]
          Length = 545

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 143/553 (25%), Positives = 249/553 (45%), Gaps = 40/553 (7%)

Query: 14  SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73
           S ++   WQ  Y          +  +      P +  +  + V +   A     S R+ +
Sbjct: 16  SFLLWEQWQIDYGPKPQAVAQTDGASRPAGDLPQRPSDDESDVTVHTEAPTQEGSRRIRV 75

Query: 74  KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133
               L   I+ +G     L+L  Y +        V LL+     + + A+  ++  A   
Sbjct: 76  HTDVLSLEIDTRGGDLRQLDLLNYPVSKEQPDRPVRLLTDQG--DIFVAQSGFIGAAQ-- 131

Query: 134 ELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTN 188
           ++PN +++W   +G+           + L + +   +   +T  L    YL  +  T+ N
Sbjct: 132 QVPNHHSLWQAEAGEYRLQDGQDILRVPLTWSDGQGVTVTKTYILRRGSYLIDMEQTIDN 191

Query: 189 NSIDQIRFSPRGRIMRHKPQ---TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245
            S          ++ R +P      +       G +    DKS  +  + D+   ++   
Sbjct: 192 RSNTNWTGRQYMQLQRKEPTSAQEDSQFIRTYTGGVLHTEDKSYEKIAFKDMASGNLDA- 250

Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305
                W+ +   Y+ + ++P  E    S F   +     +     +    +  G S T  
Sbjct: 251 KSRQGWIAMIQHYFLAAWVPPAEDE--STFYTKALADRVFVIGAYSPPAEVPAGSSQTLK 308

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
             LFAG K    +         P  E+  D+G    IAKP++ L+  F+    N+G AI+
Sbjct: 309 ARLFAGPKLQHVLEGIA-----PGLELTADFGILTVIAKPIYWLLETFHGFFNNWGWAII 363

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
             T+ +K LFF L++  Y S ANM+ +QPK+ EL+E++     Q   +AM++LY+   +N
Sbjct: 364 FVTLVIKALFFKLSEASYRSMANMRKLQPKLVELKERY-GEDRQRYNQAMMELYRKEKVN 422

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           PL GC PIL+QIPVF ++Y V+  S+++R APF  W+ DL++ DP               
Sbjct: 423 PLGGCLPILVQIPVFISLYWVLVESVDLRQAPFLLWLDDLSSKDPYF------------- 469

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
                 + P+IM +SMFIQ +++PPP D  QA ++ + P+VF      FP+GL++YW  +
Sbjct: 470 ------VLPLIMGVSMFIQQRLNPPPTDPIQARVMQFFPLVFTVFFLFFPSGLVLYWVVN 523

Query: 546 NVISIVQQAVIMK 558
           N++SI+QQ  I +
Sbjct: 524 NILSIIQQWYITR 536


>gi|269140892|ref|YP_003297593.1| 60 kDa inner membrane insertion protein [Edwardsiella tarda EIB202]
 gi|267986553|gb|ACY86382.1| 60 kDa inner membrane insertion protein [Edwardsiella tarda EIB202]
 gi|304560650|gb|ADM43314.1| OxaI/YidC membrane insertion protein [Edwardsiella tarda FL6-60]
          Length = 541

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 142/571 (24%), Positives = 250/571 (43%), Gaps = 56/571 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N F+ +AL  +    WQ +      + +        +      V  S        
Sbjct: 1   MDSQRNLFL-VALLFVSFLIWQAWQTDNNPQPVAQTAGQSVSDTASQAVPESG------- 52

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +K   L  +IN +G   +  +L  Y   + SN+P   L   +  +  Y
Sbjct: 53  ------QGKLITVKTDVLALTINTRGGDIEQADLLAYPATLGSNTPFQLL--ETTPQFVY 104

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+      +      N        +              I L +  AN +++ +T  L 
Sbjct: 105 QAQSGLTGKSGPDNPANGARPLYSANQTSYEMLPGQDELRIPLTYTAANGVIYTKTFVLK 164

Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
            +     +   V N+S D +  +  G++ +         T +N F +     A       
Sbjct: 165 RNDYAIAVDYKVKNDSHDALDLTLFGQLKQSVDLPKHRDTGSNNFALHTFRGAAYSSSDD 224

Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             QKY     +    N      W+ +  +Y+A+ +IP       + F   + G+ +    
Sbjct: 225 KYQKYSFSDIEDKNLNVQTKGGWVAMLQQYFATAWIPHDSG--VNTFYTANLGNGQAAIG 282

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
           + A  +++ P      +  L+ G +    +         P  ++ +D+GW +FI++P+F 
Sbjct: 283 YKAPSVSVAPNTEKVLSTTLWVGPELQSDMAAVA-----PHLDLTVDYGWLWFISQPLFK 337

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+   ++ VGN+G AI++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      
Sbjct: 338 LLQLIHSFVGNWGFAIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK- 396

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q + + M+ LYK+  +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DLAA 
Sbjct: 397 QRMSQEMMALYKSEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLAAP 456

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527
           DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+F
Sbjct: 457 DPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIF 497

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                 FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 498 TVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 528


>gi|311109680|ref|YP_003982533.1| preprotein translocase subunit YidC [Achromobacter xylosoxidans A8]
 gi|310764369|gb|ADP19818.1| preprotein translocase subunit YidC [Achromobacter xylosoxidans A8]
          Length = 558

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 143/587 (24%), Positives = 246/587 (41%), Gaps = 48/587 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVY--------PRIEEMNNERKNIQTVKQPNQVDNS 52
           M+      + +  S  ++  W N+ ++        P      +E +       P+     
Sbjct: 1   MDI-RRTVLWMIFSFSLLLLWNNWQIHNGKPSLFGPTPAATTSEPQAAANNATPSVPSAP 59

Query: 53  YAAVLIDDRAQALS-----MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
             A          +      S  V +    L  + +  GAQ     L  Y      + P 
Sbjct: 60  VPATAAASAVPGAAAPVAARSEEVVITTDVLRLTFDTMGAQLVRAELLKYPATGQPDKPT 119

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNANN 165
           V L         Y  +   V   N    P   T + ++S +         +    ++   
Sbjct: 120 VLL--DRAAGLNYVVQTGVVGAPNGQSFPTHQTPFRIVSSERQLTGDNLVVAFEGESGGV 177

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAV 223
            + +        Y   +   + N     +  +   ++ R    P   ++ +    GF   
Sbjct: 178 KVTKTFTLHRGRYDVDVRHDLANVGAAPVSPALYLQLERDGNDPADTSSFYHTFTGFAVY 237

Query: 224 LGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                  +  +SDIEK   S      N W+ +   Y+A+ ++P +     ++   +    
Sbjct: 238 SEQDKFQKITFSDIEKKKASYIKQSDNGWIAVVQHYFATAWVPPQGKQRTNELLEVQKN- 296

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             Y A+       I PG +    + L+ G ++   +         P  E+++D+GW   I
Sbjct: 297 -LYAARSIEAVGEIAPGAATRVDSHLWVGPQDQKAMAALA-----PGLELVVDYGWLTII 350

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           AKP+F LM++ ++L+GN+G  I+  TV +K +F+PLA   Y S A MK + P++  L+EK
Sbjct: 351 AKPLFKLMTWLHSLLGNWGWTIVALTVLIKAVFYPLAAASYRSMARMKQVAPRLQALKEK 410

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +     Q L  AM+++Y+T  INPL GC P+++QIPVF ++Y V+  S+EMR AP+  W+
Sbjct: 411 YGDDK-QKLNAAMMEMYRTEKINPLGGCLPMVVQIPVFISLYWVLLASVEMRGAPWILWV 469

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DL+  DP                     I P IM  +MF+Q+K++P P D  QA ++  
Sbjct: 470 HDLSIRDPYF-------------------ILPAIMMATMFLQIKLNPTPPDPIQAKVMMI 510

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           MP+VF   +  FPAGL++YW  +N +SI QQ  I +    +      
Sbjct: 511 MPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWSITRAMQRKTEAAAN 557


>gi|152979764|ref|YP_001345393.1| putative inner membrane protein translocase component YidC
           [Actinobacillus succinogenes 130Z]
 gi|171704505|sp|A6VR61|OXAA_ACTSZ RecName: Full=Inner membrane protein oxaA
 gi|150841487|gb|ABR75458.1| 60 kDa inner membrane insertion protein [Actinobacillus
           succinogenes 130Z]
          Length = 537

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 137/553 (24%), Positives = 244/553 (44%), Gaps = 41/553 (7%)

Query: 15  VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELK 74
            I    +Q + +    + +  E    Q+    +   ++ A         + +    + L+
Sbjct: 14  FISFLVYQQWEIDKAPKPVVRETAVSQSDTPNSSSASTSAV-------DSQAKGRVITLQ 66

Query: 75  NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE 134
           N      ++  G    +  L  Y  +++       L +   T   Y A+   V       
Sbjct: 67  NDVFRLKVDTLGGDVIESELLNYAQELNGEERFTLLENKDGT--TYVAQSGLVGKNGIDS 124

Query: 135 LPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSI 191
                                   +   F+    I  +  +     Y   +   + N S 
Sbjct: 125 AAGRADYQVNGDNFVLAEGQDELSVPFTFEKDGVIYRKIFMLKRGSYDIAVNYEIRNQSD 184

Query: 192 DQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251
           + I   P G++     +++ +         A    ++  ++   D  K +  + +    W
Sbjct: 185 ETIEVQPYGQLKHTLVESSGSMAMPTYTGGAYSSSETNYKKYSFDDMKGANLSVNTKAGW 244

Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311
           + +   Y+ S +IP+++        Y +  +      F    +T+  G + T    L+ G
Sbjct: 245 VAVLQHYFVSAWIPNQDADNQL---YTTTNNGMGFIGFRGPTVTVPAGATETVKTALWTG 301

Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371
            K    +    +       ++ +D+GW +FIAKP+F L++   +LV N+G+AI+  T+ V
Sbjct: 302 PKLQNQMGEVAE-----HLDLTVDYGWAWFIAKPLFALLTLIQSLVSNWGLAIIGVTLVV 356

Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431
           K + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++LYK   +NPL GC 
Sbjct: 357 KAILYPLTKAQYTSMAKMRMLQPKLQEMRERFGD-DRQRMSQEMMKLYKEEKVNPLGGCL 415

Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491
           P+L+Q+P+F A+Y     ++E+RHAPF+GWI+DL+A DP                     
Sbjct: 416 PLLIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------------------- 456

Query: 492 IWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           I P++M  SMF+  K+SP P AD  Q  ++N+MPV+F      FPAGL++YW  SNVI+I
Sbjct: 457 ILPLLMGGSMFLLQKLSPTPVADPMQQKVMNFMPVIFTVFFLWFPAGLVLYWLVSNVITI 516

Query: 551 VQQAVIMKMHGAE 563
           +QQ +I +    +
Sbjct: 517 IQQQLIYRGLEKK 529


>gi|114049516|ref|YP_740066.1| protein translocase subunit yidC [Shewanella sp. MR-7]
 gi|123030126|sp|Q0HPE6|OXAA_SHESR RecName: Full=Inner membrane protein oxaA
 gi|113890958|gb|ABI45009.1| protein translocase subunit yidC [Shewanella sp. MR-7]
          Length = 541

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 141/564 (25%), Positives = 236/564 (41%), Gaps = 39/564 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +      + +  E   +      +  D   A   +  
Sbjct: 1   MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANATTNHSADVPEADTGVPA 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L   IN  G       L  + L+   + P V L    +    Y
Sbjct: 60  AMTATQN--LITVKTDQLDVQINPVGGDIVFAALVSHKLEQGKDQPFVLLEQTKD--FTY 115

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175
            A+   +              +     +        T  + L +   N + + +      
Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFAASKTEFTLADGQDTLEVPLTYVADNGVTYTKVFVFHR 175

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             +   I   + N S   ++    G+I +    + ++         A        E+   
Sbjct: 176 GKFNVDIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTQDVRYEKYKF 235

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           +    S  N      W  +   Y+ S +IP    S        + G A     F      
Sbjct: 236 EDMSKSNLNQPTLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRGAVYD 293

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I PG +   ++  + G K+   +             +++D+G+ +++A P+  L+ ++ +
Sbjct: 294 IAPGATQEISSQFYVGPKDQKALSALSDT-----LNLVVDYGFLWWLAVPIHWLLMFYQS 348

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F     Q + +AM
Sbjct: 349 FVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGD-DRQKMGQAM 407

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NP+ GC PILLQ+P+F A+Y V+  S E+RHAPF  WI DL+  DP     
Sbjct: 408 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYY--- 464

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533
                           I P++M +SMF+  KM P  P  D  Q  ++ WMPV+F      
Sbjct: 465 ----------------ILPLLMGVSMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLW 508

Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557
           FP+GL++YW   N+++I+QQ +I 
Sbjct: 509 FPSGLVLYWLVGNIVAIIQQKIIY 532


>gi|113972267|ref|YP_736060.1| protein translocase subunit yidC [Shewanella sp. MR-4]
 gi|123129963|sp|Q0HD64|OXAA_SHESM RecName: Full=Inner membrane protein oxaA
 gi|113886951|gb|ABI41003.1| protein translocase subunit yidC [Shewanella sp. MR-4]
          Length = 541

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 141/564 (25%), Positives = 235/564 (41%), Gaps = 39/564 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +      + +  E   +      +  D   A   +  
Sbjct: 1   MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANATTNHSADVPEADTGVPA 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L   IN  G       L  + L+   + P V L    +    Y
Sbjct: 60  AMTATQN--LITVKTDQLDVQINPVGGDIVFAALVSHKLEQGKDQPFVLLEQTKD--FTY 115

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175
            A+   +              +     +        T  + L +   N + + +      
Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFAASKTEFTLADGQDTLEVPLTYVADNGVTYTKVFVFHR 175

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             +   I   + N S   ++    G+I +    + ++         A        E+   
Sbjct: 176 GKFNVDIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTQDVRYEKYKF 235

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           +    S  N      W  +   Y+ S +IP    S        + G A     F      
Sbjct: 236 EDMSKSNLNQPTLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRGAVYD 293

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I PG +   ++  + G K+   +             +++D+G+ +++A P+  L+ ++ +
Sbjct: 294 IAPGATQEISSQFYVGPKDQKALSALSDT-----LNLVVDYGFLWWLAVPIHWLLMFYQS 348

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F     Q + +AM
Sbjct: 349 FVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGD-DRQKMGQAM 407

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NP+ GC PILLQ+P+F A+Y V+  S E+RHAPF  WI DL+  DP     
Sbjct: 408 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYY--- 464

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533
                           I P++M  SMF+  KM P  P  D  Q  ++ WMPV+F      
Sbjct: 465 ----------------ILPLLMGASMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLW 508

Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557
           FP+GL++YW   N+++I+QQ +I 
Sbjct: 509 FPSGLVLYWLVGNIVAIIQQKIIY 532


>gi|317401604|gb|EFV82230.1| inner membrane protein oxaA [Achromobacter xylosoxidans C54]
          Length = 561

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 142/590 (24%), Positives = 251/590 (42%), Gaps = 51/590 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYV---YPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +  S  ++  W N+ +    P +        +      P   +N+  +V 
Sbjct: 1   MDI-RRTVLWMIFSFSLLLLWNNWQIHNGKPSLFGAPTPTASTNANGTPAAANNATPSVP 59

Query: 58  ID-------------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                            A   + S  V +    L  + +  GAQ     L  Y     ++
Sbjct: 60  NAPPATAAAPSAVPGAAAPVPTRSEEVVITTDVLRLTFDTLGAQLVRAELLKYPATGQAD 119

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWN--LISGKILTPTTPIKLVFKN 162
            P V L         Y A+   V  AN    P   T +       ++   +  +    ++
Sbjct: 120 KPTVLL--DRTAGLNYVAQTGVVGAANGQNFPTHQTPFRVVSTDRQMTGDSLAVAFEAES 177

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGF 220
               + +        Y   +   + N     +  +   ++ R    P   ++ +    G 
Sbjct: 178 GGVKVTKTFTLHRGRYDIDVRHDLANVGAAPVTPALYLQLERDGNDPADTSSFYHTFTGM 237

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                     +  ++DIEK   +   +  N W+ +   Y+A+ ++P +    +++   + 
Sbjct: 238 AVYSEQDKFQKMTFADIEKKKANYIKQADNGWIAVVQHYFATAWVPPQGKPRNNEVLEVQ 297

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
                Y A+       I PG +    + L+ G ++   +         P  E+++D+GW 
Sbjct: 298 KN--LYAARTIEAVGEIAPGAAARVDSHLWVGPQDQKAMAALA-----PGLELVVDYGWL 350

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             IAKP+F LM++ ++++GN+G  I+  TV +K LF+PLA   Y S A MK + P++  L
Sbjct: 351 TIIAKPLFTLMTWLHSILGNWGWTIVALTVLIKALFYPLAAASYRSMARMKQVAPRLQAL 410

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +EK+     Q L  AM+++Y+T  INPL GC P+++QIPVF ++Y V+  S+EMR AP+ 
Sbjct: 411 KEKYGDDK-QKLNAAMMEMYRTEKINPLGGCLPMVVQIPVFISLYWVLLASVEMRGAPWI 469

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            W+ DL+  DP                     I P IM  +MF+Q+K++P P D  QA +
Sbjct: 470 LWVHDLSIRDPYF-------------------ILPAIMMATMFLQIKLNPTPPDPVQAKV 510

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           +  MP+VF   +  FPAGL++YW  +N +SI QQ  I +    +      
Sbjct: 511 MMIMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWSITRAMQRKTEAAAN 560


>gi|238921764|ref|YP_002935279.1| inner membrane protein translocase component YidC [Edwardsiella
           ictaluri 93-146]
 gi|259515692|sp|C5BF61|OXAA_EDWI9 RecName: Full=Inner membrane protein oxaA
 gi|238871333|gb|ACR71044.1| inner membrane protein OxaA [Edwardsiella ictaluri 93-146]
          Length = 541

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 142/571 (24%), Positives = 250/571 (43%), Gaps = 56/571 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N F+ +AL  +    WQ +      + +        +      V  S        
Sbjct: 1   MDSQRNLFL-VALLFVSFLIWQAWQTDHNPQPVAQTAGQSISDTASQAVPESG------- 52

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +K   L  +IN +G   +  +L  Y   + S++P   L   +  +  Y
Sbjct: 53  ------QGKLITVKTDVLALTINTRGGDIEQADLLAYPATLGSDTPFQLL--ETTPQFVY 104

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+      +      N        +              I L +  AN +++ +T  L 
Sbjct: 105 QAQSGLTGKSGPDNPANGARPLYSANQTSYEMLPGQDELRIPLTYTAANGVIYTKTFVLK 164

Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
            +     +   V N+S D +  +  G++ +         T +N F +     A       
Sbjct: 165 RNDYAIAVDYKVKNDSHDALDLTLFGQLKQSVDLPKHRDTGSNNFALHTFRGAAYSSSDD 224

Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             QKY     +    N      W+ +  +Y+A+ +IP       + F   + G+ +    
Sbjct: 225 KYQKYSFSDIEDKNLNVQTKGGWVAMLQQYFATAWIPHDSG--VNTFYSANLGNGQAAIG 282

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
           + A  +++ P      +  L+ G +    +         P  ++ +D+GW +FI++P+F 
Sbjct: 283 YKAPSVSVAPNTEKVLSTTLWVGPELQSDMAAVA-----PHLDLTVDYGWLWFISQPLFK 337

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+   ++ VGN+G AI++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      
Sbjct: 338 LLQLIHSFVGNWGFAIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK- 396

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q + + M+ LYKT  +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DLAA 
Sbjct: 397 QRMSQEMMALYKTEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLAAP 456

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527
           DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+F
Sbjct: 457 DPFY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIF 497

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                 FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 498 TVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 528


>gi|224367782|ref|YP_002601945.1| OxaA [Desulfobacterium autotrophicum HRM2]
 gi|223690498|gb|ACN13781.1| OxaA [Desulfobacterium autotrophicum HRM2]
          Length = 557

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 155/574 (27%), Positives = 268/574 (46%), Gaps = 32/574 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFY-------VYPRIEEMNNERKNIQTVKQPNQVDNSY 53
           M+     F AI LS++++  W  F+         P    ++NE+            D + 
Sbjct: 1   MDDQKRLFTAIILSIVVIVGWNFFFVDSKPVPEKPDQAIVSNEQPMAGKGDIAPITDPAP 60

Query: 54  AAVLIDDRAQALSMS------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
           +     D AQ  + +        +++ N     +I+  GA+ + L L  Y      +SP+
Sbjct: 61  SQQTEIDAAQPPATAIPTRNARTIQVSNQFYNIAISETGAKVNSLTLNAYRETSEKDSPL 120

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167
             ++SP+ T   +   LD  S    +E              +      +   + +A  ++
Sbjct: 121 KEMVSPNLTGGLFGVSLDGKSIPG-LETALFTAQTPSDQLNLDQGKKSLTFTWTSAQGVV 179

Query: 168 FERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
            E+  +   + YL      + N+S   ++ S    I         +    +  F      
Sbjct: 180 VEKIFTFSADSYLIGFDLVLKNSSGMPMKDSFMVEI-----PGIIDEKNARFSFEGPTTL 234

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
            +   ++    + +    +     W G +D+Y+ S  IP   T    +  + S       
Sbjct: 235 INDKLEEIKAKKIAEKDTYEGQIQWAGYTDRYFMSCLIPQAPTEAKVKLSFDS---PVVT 291

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
            ++  +   + PGK +T +  LF G K    +  Y  +      +  I++GWF  +AKP 
Sbjct: 292 TRYVQSMERLDPGKQVTYSFSLFMGPKSLKLLSSYGNN-----LKKAINFGWFDILAKPC 346

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
            M M+  + L+ N+GIAIML T+ +KL+F+PL  K Y S  +MK +QP + E+REK+K  
Sbjct: 347 LMGMNLIHGLIPNYGIAIMLLTLLIKLIFWPLGTKSYRSMNDMKKLQPLMMEMREKYKGD 406

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q + + ++ LYKT+ +NP++GC P+++Q+P+FFA+Y+++  ++E+RHAPF  WI DL+
Sbjct: 407 K-QRMNQEVMGLYKTYKVNPMSGCLPMIVQMPIFFALYRMLYQAIELRHAPFMWWINDLS 465

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
           A D    F     +PF    +  + +  IIM  +MF+Q KMSP   D  QA ++  MP+ 
Sbjct: 466 APDRLFHFD--FAIPFMQAPY-GIPVLTIIMGATMFLQQKMSPSTGDPTQAKMMMLMPLF 522

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
             F   +FPAGL++YW  +NV+SI QQ  I K  
Sbjct: 523 MTFIFINFPAGLVLYWLVNNVLSIGQQYYIQKKF 556


>gi|294138798|ref|YP_003554776.1| inner membrane protein oxaA [Shewanella violacea DSS12]
 gi|293325267|dbj|BAI99997.1| inner membrane protein oxaA [Shewanella violacea DSS12]
          Length = 544

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 140/565 (24%), Positives = 237/565 (41%), Gaps = 38/565 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N F+ I L  +    WQ +      + +  E  ++ T        +S        
Sbjct: 1   MESQRNIFL-IGLLFVSFLLWQQWQTDQAPQPVTTELTSVSTASNTTDAHSSDVPDADSA 59

Query: 61  -RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A  ++    + +    L+  IN  G       L  + L+  S+ P V L    +    
Sbjct: 60  LPAATVASKELITIHTDQLVIKINPVGGDIVYSALVEHKLEQESDEPFVLLEQTKDIN-- 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL-----VFKNANNILFERTISL 174
           Y A+   +              ++  S           L               +  I  
Sbjct: 118 YIAQSGLIGRNGIDSSVKGRAHFDSASQDYTMAADQETLEVPLTYVAENGAKYTKMFIFH 177

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
              +   +   V N +   ++    G+I     +++++         A        E+  
Sbjct: 178 RGQFKIDVDYLVDNTTDKPLQVQMYGQIKHSIKKSSSSMIMPTYLGAAFSTSDIRYEKYK 237

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
            D       +      W  +   Y+ S +IP +           + G A     F     
Sbjct: 238 FDDMADKDLDKKTLGGWAAMLQHYFVSAWIPPENDQNTIFSSISAGGQAN--IGFRGAIY 295

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
            I PG + T ++  + G K+   +             +++D+G+ +++A P+  L+ +F 
Sbjct: 296 DIAPGATQTISSQFYVGPKDQEALSEISDS-----LNLVVDYGFLWWLAVPINKLLMFFQ 350

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++V N+G+AI+L T+ V+ + FPL K QY S A M+N+QPK+ E++E+F     Q + +A
Sbjct: 351 SIVSNWGLAIILITLTVRGMLFPLTKAQYTSMAKMRNLQPKLAEMKERFGD-DRQKMGQA 409

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NP+ GC PILLQ+P+F ++Y V+  S+E+RHAPF  WI DL+  DP    
Sbjct: 410 MMELYKKEKVNPMGGCLPILLQMPIFISLYWVLMESVELRHAPFMLWITDLSVQDPYY-- 467

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALS 532
                            + PI+M +SMF+  KM P  P  D  Q  ++ WMPVVF     
Sbjct: 468 -----------------VMPILMGISMFVMQKMQPMAPTMDPMQQKMMQWMPVVFTVFFL 510

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIM 557
            FPAGL++YW   N+++I QQ +I 
Sbjct: 511 WFPAGLVLYWLVGNLVAITQQKIIY 535


>gi|149375641|ref|ZP_01893410.1| Preprotein translocase subunit YidC [Marinobacter algicola DG893]
 gi|149360043|gb|EDM48498.1| Preprotein translocase subunit YidC [Marinobacter algicola DG893]
          Length = 570

 Score =  341 bits (875), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 141/596 (23%), Positives = 250/596 (41%), Gaps = 63/596 (10%)

Query: 1   MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ---------- 48
           M+       A    +S ++V AW   Y  P+ +    +          +           
Sbjct: 1   MDIQRIVLFAGLAIVSYMMVLAWNEDYHQPQTQPATEQASTTTQPASTDDMTLPGESATG 60

Query: 49  ----------VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98
                      +     +   + +   +    + ++       I+  G    + +L  + 
Sbjct: 61  PDTSSEEFTTPEGDGQTLSASETSSVSASDQLITVRTDVYELKIDRVGGNLIESSLLQHD 120

Query: 99  LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-----NIELPNSNTVWNLISGKILTPT 153
             + S   +  L +   +K  Y  E   +         N   P  N   +    +    T
Sbjct: 121 RSLDSEESLRLLTN--TSKRTYIMESGLIGRDGIDSKRNGNAPVYNASASEYELQEGENT 178

Query: 154 TPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212
             + L F   NN+   +      + Y   +   + N S    + +  G+I+R +    T 
Sbjct: 179 LTVDLTFTTDNNVEVTKQYLFSRDSYEIDVRYQINNQSDSVWQANMTGKIVRDQAPDPTA 238

Query: 213 T----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268
                     G +    +    +  + D+ ++ I+    +N WL     Y+ + ++P ++
Sbjct: 239 QNSLGIRAFLGMVVSSPEDPYEKFDFDDLSENPINQ-SVTNGWLAFLQHYFLAAWVPERD 297

Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328
                Q          Y   F      + PG++   +   + G K    + +       P
Sbjct: 298 QPAQFQSTRR---GPLYVMGFVYPATVVEPGQTSEVSAKAYVGPKIIERLENVA-----P 349

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
             +  +D+G+ +FIA P+F+++ +F+ LVGN+G+AI+L TV VK +FF L+   Y S A 
Sbjct: 350 NLDRTVDFGFLFFIALPLFIILDWFHGLVGNWGVAIILLTVLVKAVFFKLSATSYRSMAR 409

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ + P++  L+E +     Q + + M+ LYK   INPL GC PIL+Q+PVF ++Y V+ 
Sbjct: 410 MRAVAPQLTRLKELYGD-DRQRMSQEMMALYKREKINPLGGCLPILVQMPVFISLYWVLF 468

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
            S+++RHAPF  WI+DL+  DP                     I PI+M  SM +QM ++
Sbjct: 469 ESVQLRHAPFMLWIQDLSVMDPYF-------------------ILPILMGASMMLQMSLN 509

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           P P D  QA I+  MP++F      FPAGL++YW  +N++SI QQ  I +   AE+
Sbjct: 510 PTPPDPMQAKIMKLMPLIFTVFFLWFPAGLVLYWLVNNILSISQQWYITRKIEAEV 565


>gi|330505869|ref|YP_004382738.1| putative inner membrane protein translocase component YidC
           [Pseudomonas mendocina NK-01]
 gi|328920155|gb|AEB60986.1| putative inner membrane protein translocase component YidC
           [Pseudomonas mendocina NK-01]
          Length = 592

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 139/614 (22%), Positives = 234/614 (38%), Gaps = 81/614 (13%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   +  +     +S ++V  W   Y    +    +                +      
Sbjct: 1   MDIQRSILIVALAVVSYLMVLQWNEDYGQAALPAEVSTSTAATPALPDTPAATASTGSDD 60

Query: 59  DDRAQA-----------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
              A A            +    + +K   L  +I+ +G     L L  Y          
Sbjct: 61  IPTAVAEPTAAAVAPTAATSDELIRVKTDVLELAIDPRGGDIVQLRLPQYPRRQDRPDVP 120

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV---FKNAN 164
             L   +  +  Y A+   +   N  +  +   +W+              LV     + N
Sbjct: 121 FQLF-DNGNERTYLAQSGLIGQ-NAPDKSSGRALWSSEKQSYEMAEGQDSLVVDLTYSEN 178

Query: 165 NILFERTISLDE----------------------HYLFKIVDTVTNNSIDQIRFSPRGRI 202
            + + +  S                          Y   +   + N S      +   ++
Sbjct: 179 GVSYIKRYSFKRGLNPECSAREQELKKPGCIDPSAYQVDVRYLIDNQSDQAWSGNLFAQL 238

Query: 203 MRHKPQT----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN--------- 249
            R                  G      D+   +    DI+K                   
Sbjct: 239 KRDNSGDPSSTTATGTATYLGAAVWTADEPYKKISIKDIDKQDEKRRQGDANAWFKENVQ 298

Query: 250 -SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL 308
             W+     Y+ + ++P       +  +   D    Y   F+   + +  G    T   L
Sbjct: 299 GGWVAWLQHYFVTAWVP--NKDNTNLIQTRKDSQGNYIVGFTGPSVQVAAGGKGETGAIL 356

Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368
           +AG K    +         P  E+ +D+G+ +F+A+P+F L+   + ++GN+G +I++ T
Sbjct: 357 YAGPKLQEHLSTLS-----PGLELTVDYGFLWFLAQPIFWLLQVIHGVLGNWGWSIIVLT 411

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428
           + +KL+FFPL+   Y S A M+ + PK+  L+E+      Q + +AM++LYK   INPL 
Sbjct: 412 IIIKLIFFPLSAASYRSMARMRAVSPKLQALKEQHGD-DRQKMSQAMMELYKKEKINPLG 470

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           GC PIL+Q+PVF A+Y V+  S+EMR AP+  WI DL+  DP                  
Sbjct: 471 GCLPILVQMPVFLALYWVLLESVEMRQAPWLLWITDLSIKDPFF---------------- 514

Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
              I PIIM  +MFIQ +++P P D  QA +L  MP++F F    FPAGL++YW  +N +
Sbjct: 515 ---ILPIIMGATMFIQQQLNPTPPDPMQARVLKLMPIIFTFFFLWFPAGLVLYWVVNNCL 571

Query: 549 SIVQQAVIMKMHGA 562
           SI QQ  I +   A
Sbjct: 572 SIAQQWYITRRIEA 585


>gi|308273509|emb|CBX30111.1| hypothetical protein N47_D29200 [uncultured Desulfobacterium sp.]
          Length = 551

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 147/565 (26%), Positives = 256/565 (45%), Gaps = 20/565 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME+   + +A+ALS I+   W  FY   +  +   E +NI   + P    N         
Sbjct: 1   MEQAR-FIIAVALSFIVFLGWDYFYNDKKPAKQITEVQNIDKRQSPVDNKNINPPEKSSQ 59

Query: 61  RAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
               +    +     E+  P     IN K A      L+ Y+  +  +SP   L+     
Sbjct: 60  SDDTVFQENKPLRVFEINTPLYSVKINEKNAAITSFKLKKYNETIDVDSPKKELIPKDLN 119

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD- 175
                   D  S         +       +  +   +  IK  +K+   ++ E+      
Sbjct: 120 TGTVIVGFDEKSVHGIENATYTADSNAAANLVLDQGSKEIKFYWKSPEGVIIEKKYKFSA 179

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
           + YL  +   V N S   I+      I  +     +         +     + +      
Sbjct: 180 DTYLIGLKLNVLNQSSQSIKDRLFVSIESYNMSNKSTNSFEGPSALINGSLEQIK----- 234

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
                  +++  +  W+ I D+Y+ S  IP      + +    +     ++ +++  E  
Sbjct: 235 LKNIEEKNSYPGNIKWVAIQDRYFMSAIIPVTPVEANMRLYMKAKDKGYFEEQYTLPEKE 294

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I PG+       L+ G K    +     D         +++GWF F+AKP+   M++ Y+
Sbjct: 295 IRPGEQEEKEFKLYFGPKSLKLLGSLGYD-----LNKAVNFGWFDFLAKPVLYAMNFLYS 349

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            + N+G+ I+L T+F K++F+PL  K Y S   MK IQP + EL+EK+     + + + +
Sbjct: 350 FIPNYGVVIILLTIFFKIIFWPLGSKSYKSMNEMKKIQPLLAELKEKYGNDK-KRMNEEL 408

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           + LYKT+ INP+ GC P++ Q+PVFFA Y+++  ++E+RHAPF  WIKDL+A D    F 
Sbjct: 409 MGLYKTYKINPMGGCLPMVAQLPVFFAFYRMLYETIELRHAPFVFWIKDLSAPDRLFHFA 468

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
               +PF  P +  + +  I+M  +MFIQ KM+P   D  QA ++ ++P+VF     +F 
Sbjct: 469 --FTIPFMEPPY-GIPVLTIVMGATMFIQQKMAPAVGDPAQAKMMMFLPLVFTVIFINFS 525

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560
           AGL++YW  +NV+SI+QQ +I + +
Sbjct: 526 AGLVLYWLVNNVLSILQQNIISRKN 550


>gi|119503568|ref|ZP_01625651.1| putative inner membrane protein translocase component YidC [marine
           gamma proteobacterium HTCC2080]
 gi|119460630|gb|EAW41722.1| putative inner membrane protein translocase component YidC [marine
           gamma proteobacterium HTCC2080]
          Length = 571

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 141/594 (23%), Positives = 253/594 (42%), Gaps = 66/594 (11%)

Query: 1   MERNWNYFVAIA--LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA---- 54
           M+      +A A  LS +++  W  F         +   +   +   P            
Sbjct: 1   MDIQRYLLIAAAAVLSFMLLTEWNVFKDQRVAATQDTSPRIANSFSSPAASPQEQPTGIA 60

Query: 55  ----------------------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92
                                 A   +    +      + +KN  L   ++L+G    + 
Sbjct: 61  NRSDIYDTAANSDDVPTILPALAPQTNTPLASSEPKNIIVIKNDVLEFVVDLRGGDIIET 120

Query: 93  NLRGYHLDV-SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151
           +L  Y   +   ++P+V L    +++  Y  +   V          +            +
Sbjct: 121 SLTKYPERIEDPDTPLVLL--ERSSERTYIMQSGLVGPDGIDTNGRAIYDAAKNRYDATS 178

Query: 152 PTTPIKLVFKNANNIL-FERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209
            +  I L  ++    +  E+  ++  + Y  ++   + NN  +  +  P  ++ R     
Sbjct: 179 GSKTIVLSARDTPPGVAVEKHFTVAPNTYTIEVSYHIVNNGTEIWQSIPFAQLKRDSSPA 238

Query: 210 ATNT-----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264
            +            G      +    +  ++DI         ++  W+ +   Y+ +  +
Sbjct: 239 PSADTSGFGMQPFLGAATTTPENRYEKFTFADIADDPWK-TQQTGGWIAMLQHYFTAALV 297

Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324
           P  E +     +   DG     A F++  + I PG++ +     +AG K+  T+      
Sbjct: 298 PDAEATHTYSTRRTRDGFN--IAGFTSEPLRIAPGQTGSWNTQFYAGPKDQYTLAELA-- 353

Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384
              P  E+++D+GW ++I KP+F L++   ++V N+G+AI+L T+ +K  FF L+   Y 
Sbjct: 354 ---PHLELVVDYGWLWWIGKPLFWLLTQIQSVVINWGVAIILLTLLIKTAFFKLSAASYR 410

Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
           S A M+  QPK+  ++E+      Q   +AM++LYK   INP+ GC PIL+Q+PVF A+Y
Sbjct: 411 SMAKMRKAQPKMVAIKEQHANDK-QKQSQAMMELYKKEKINPMGGCLPILVQMPVFIALY 469

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
            V+  S+E+R APF  WIKDLA  DP                     + P++M  SMF  
Sbjct: 470 WVLMESVELRQAPFALWIKDLAVMDPYF-------------------VLPLMMGASMFFM 510

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            K++PPP D  QA ++ W+PVVF F    FPAGL++YW  +N++S+ QQ  I +
Sbjct: 511 QKLNPPPPDPMQAKLMQWLPVVFTFFFLWFPAGLVLYWVVNNLLSMAQQYYITR 564


>gi|328471231|gb|EGF42133.1| membrane protein insertase [Vibrio parahaemolyticus 10329]
          Length = 540

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 140/570 (24%), Positives = 245/570 (42%), Gaps = 42/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         E+    +        +    V    
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQAVEQAQSSSTLPAPSFADELDPVPGQQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           +A A      + +    L  SI+  G      +L  Y  ++ S+ P V L       + +
Sbjct: 60  QASA----KTITVTTDVLTLSIDTVGGDVVHADLNQYSAELDSSDPFVLL--KDTQGHQF 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V         ++   +N+ +             + + F        +  +    
Sbjct: 114 IAQSGLVGPQGIDLSSSNRPHYNVSADSFTLADGQDELRVPMTFTANGIEYTKTYVLKRG 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   V NNS +   F     + ++      + T     G      D    +  + 
Sbjct: 174 SYALNVEYDVANNSGNNATFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYSFE 233

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S        W  +   Y+A+ +IP  E   +   + + +              
Sbjct: 234 DMQDRNLSINLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMPNK 290

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+  L+++  
Sbjct: 291 TIATGDQAKFEATLWVGPKLQQEMAAVA-----PNLDLVVDYGWLWFIAKPLHSLLAFIQ 345

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC P++LQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 405 MMELYKKEKVNPLGGCLPLVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 535


>gi|262377655|ref|ZP_06070875.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter lwoffii
           SH145]
 gi|262307414|gb|EEY88557.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter lwoffii
           SH145]
          Length = 587

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 141/586 (24%), Positives = 242/586 (41%), Gaps = 64/586 (10%)

Query: 11  IALSVIIVYAWQNFYVYPRIEEMNNER----------KNIQTVKQPNQVDNSYAAVLIDD 60
             ++ +++ AWQ  Y     +                 N QT    + +  +        
Sbjct: 14  FVVAYLLILAWQKDYGNAETKPQQETAVVSHDVSADLPNGQTATVASDLPQANVPAQQAT 73

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            A A      + ++       IN KG     + L  +  +  S+ P V L   S+ K  Y
Sbjct: 74  DATAPVSQQLISVQTDLYHLWINPKGGDIVRIELLNHDKNKDSDEPFVML--ESDAKRTY 131

Query: 121 FAELDYVSTANNIELPNSNTVWN--------------LISGKILTPTTPIKLVFKNANNI 166
            A+   +         N   ++                           + LVFK A+ I
Sbjct: 132 VAQSGLIGLNGPDSSRNGRPMYELEKTAYTLADAKTVKSKDGENLKVLSVPLVFKTADGI 191

Query: 167 LFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFI 221
              +T +  +  Y   +   V N S    +    G+I R   +         F +     
Sbjct: 192 EIIKTFNFTEGEYPVVVNHKVVNRSGQTWQGQMFGQIKRDNSEDPGKSDQGIFTLGTFLG 251

Query: 222 AVLGDKSLVEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSK-------ETSFHS 273
              G       K   D       +   +  W+ +   Y+ S ++P +         ++ +
Sbjct: 252 GAWGTPDEQYNKLKFDNFVEEKVSTEATGGWVAMVQHYFVSAWVPGQLKLTQGNGEAYSA 311

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
           + +            F++    +  G         ++G K    +               
Sbjct: 312 KLESRKSTDNMNIIGFTSPTFNVPAGTVAEIDATFYSGPKIQSELKDLAA-----GLNQT 366

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+GW + IAK +F+ + +F+ LVGN+G AI+L T+ VKL+ +PL+ K Y S A M+ I 
Sbjct: 367 VDYGWLWPIAKLLFVGLEFFHGLVGNWGWAIILLTILVKLILWPLSSKSYRSMAKMRVIA 426

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P++  ++E+F         + M+ LYK   +NPLAGC P+LLQ+P+F A+Y V+  S+E+
Sbjct: 427 PEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLAGCLPLLLQMPIFLALYWVLMESVEL 485

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           RHAP+  WI+DL++ DP                     I P++M L+M+IQ  ++P P D
Sbjct: 486 RHAPWMLWIQDLSSMDPWF-------------------ILPLLMGLTMYIQQSLNPQPTD 526

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
             QA +  +MP++F   L  FPAGL++YW  +N+I+I+QQ +I K 
Sbjct: 527 PMQAKVFKFMPIIFTVFLLFFPAGLVLYWIVNNLITILQQTLINKS 572


>gi|260771041|ref|ZP_05879969.1| OxaI/YidC membrane insertion protein [Vibrio furnissii CIP 102972]
 gi|260613930|gb|EEX39121.1| OxaI/YidC membrane insertion protein [Vibrio furnissii CIP 102972]
 gi|315178632|gb|ADT85546.1| hypothetical inner membrane protein translocase component YidC
           [Vibrio furnissii NCTC 11218]
          Length = 540

 Score =  341 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 137/570 (24%), Positives = 246/570 (43%), Gaps = 42/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         E+    +      + + +      +
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQAVEQAQTSSAVPAPSLADEFDPAPSQN 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            A A      + +    L  SI+  G       L  Y  ++ S +P V L +     + +
Sbjct: 60  SAAA----KVITVTTDVLTLSIDTVGGDVVTAKLNQYSDELDSENPFVLLKNTQG--HQF 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   +         N+   + + +             I + ++       +  +    
Sbjct: 114 IAQSGLIGPQGIDLSSNNRPTYTVDADSFTLADGQDELRIPMTYQANGLEYTKTFVLKRG 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
           +Y   +   V N+S +         + ++   +  +       G      D    +  + 
Sbjct: 174 NYAVDVEFNVVNHSGNNATLGMYAHLRQNLLDSGGSLAMPTYRGGAYSTEDTRYKKYSFD 233

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  +++    +   W  +   Y+AS +IP  E   +   + + +              
Sbjct: 234 DMQDRNLAMNLANGQGWAAMIQHYFASAWIPRNEPGTNLYSRVIGNLGD---IGVRMPNK 290

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G+       L+ G K    +         P  ++++D+GW +FIAKP+  L+S   
Sbjct: 291 TIADGQQADFKATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQ 345

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYKT  +NPL GC PI LQ+P+F ++Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 405 MMELYKTEKVNPLGGCLPIFLQMPIFISLYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF   KMSP    D  Q  I+ +MPV+F F    
Sbjct: 463 -----------------ILPLLMGASMFFIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKGLEKK 535


>gi|114565213|ref|YP_752727.1| 60 kDa inner membrane insertion protein [Shewanella frigidimarina
           NCIMB 400]
 gi|122298224|sp|Q07VS6|OXAA_SHEFN RecName: Full=Inner membrane protein oxaA
 gi|114336506|gb|ABI73888.1| protein translocase subunit yidC [Shewanella frigidimarina NCIMB
           400]
          Length = 542

 Score =  341 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 137/564 (24%), Positives = 236/564 (41%), Gaps = 38/564 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +      +     +   QT        +   A +   
Sbjct: 1   MESQRN-ILLIGLLFVSFLMWQQWQTDKAPKPATA-QTVTQTNAASQHSADVPEADISGV 58

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
             +  +    + +K   L   I+  G       L  +  ++ S+ P V L   +N    Y
Sbjct: 59  PVELPANKNLISVKTDQLDIKISPIGGDIVYAALVEHKREIDSSDPFVILEQKNN--FTY 116

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL-----VFKNANNILFERTISLD 175
            A+   +         N    +++ +           L        +      +      
Sbjct: 117 IAQSGLIGRDGIDSSANGRAAYSVQTNSYSLADGKDTLTVPFTYTADNGVTYVKSFTFTR 176

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             Y   +  +++N S   ++    G+I +   ++ ++         A     +  E+   
Sbjct: 177 GQYDVGVDYSISNTSAAPLQVQMYGQIKQTIKESESSMMMPTYRGGAFSAQDTRYEKYNF 236

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D              W  +   Y+ S ++P    S        + G A     F      
Sbjct: 237 DDMADKNLAKVTLGGWAAMLQHYFVSAWVPPATDSNTIFSSMSAGGMAN--IGFRGAVYD 294

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I PG +    +  + G K    +    +        +++D+G+ +++A P+  L+ ++ +
Sbjct: 295 IAPGATQEINSQFYVGPKNQKELSAISET-----LNLVVDYGFLWWLAIPIHWLLMFYQS 349

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G+AI+L T+ V+   +PL KKQY S A M+N+QPK+ E++E+F     Q + +AM
Sbjct: 350 FVGNWGVAIILITLTVRGGLYPLTKKQYTSMAKMRNLQPKLTEMKERFGD-DRQKMGQAM 408

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NP+ GC PILLQ+P+F A+Y V+  S E+RHAPF  WI DL+  DP     
Sbjct: 409 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESYELRHAPFMLWITDLSVQDPYY--- 465

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533
                           + P++M LSMF+  KM P  P  D  Q  ++ WMPV+F      
Sbjct: 466 ----------------VLPLLMGLSMFLMQKMQPVAPTMDPMQVKMMQWMPVIFTVFFLW 509

Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557
           FPAGL++YW   N+++I QQ +I 
Sbjct: 510 FPAGLVLYWLVGNLVAITQQKIIY 533


>gi|28896777|ref|NP_796382.1| putative inner membrane protein translocase component YidC [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153838490|ref|ZP_01991157.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ3810]
 gi|260361953|ref|ZP_05774958.1| inner membrane protein OxaA [Vibrio parahaemolyticus K5030]
 gi|260876536|ref|ZP_05888891.1| inner membrane protein OxaA [Vibrio parahaemolyticus AN-5034]
 gi|260897407|ref|ZP_05905903.1| inner membrane protein OxaA [Vibrio parahaemolyticus Peru-466]
 gi|260901105|ref|ZP_05909500.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ4037]
 gi|38502972|sp|Q87TR5|OXAA_VIBPA RecName: Full=Inner membrane protein oxaA
 gi|28804985|dbj|BAC58266.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149748113|gb|EDM58972.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ3810]
 gi|308087936|gb|EFO37631.1| inner membrane protein OxaA [Vibrio parahaemolyticus Peru-466]
 gi|308090400|gb|EFO40095.1| inner membrane protein OxaA [Vibrio parahaemolyticus AN-5034]
 gi|308108175|gb|EFO45715.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ4037]
 gi|308114149|gb|EFO51689.1| inner membrane protein OxaA [Vibrio parahaemolyticus K5030]
          Length = 540

 Score =  341 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 140/570 (24%), Positives = 245/570 (42%), Gaps = 42/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         E+    +        +    V    
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQAVEQAQSSSSLPAPSFADELDPVPGQQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           +A A      + +    L  SI+  G      +L  Y  ++ S+ P V L       + +
Sbjct: 60  QASA----KTITVTTDVLTLSIDTVGGDVVHADLNQYSAELDSSDPFVLL--KDTQGHQF 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V         ++   +N+ +             + + F        +  +    
Sbjct: 114 IAQSGLVGPQGIDLSSSNRPHYNVSADSFTLADGQDELRVPMTFTANGIEYTKTYVLKRG 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   V NNS +   F     + ++      + T     G      D    +  + 
Sbjct: 174 SYALNVEYDVANNSGNNATFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYSFE 233

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S        W  +   Y+A+ +IP  E   +   + + +              
Sbjct: 234 DMQDRNLSINLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMPNK 290

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G        L+ G K    +         P  ++++D+GW +FIAKP+  L+++  
Sbjct: 291 TIATGDQAKFEATLWVGPKLQQEMAAVA-----PNLDLVVDYGWLWFIAKPLHSLLAFIQ 345

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC P++LQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 405 MMELYKKEKVNPLGGCLPLVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 535


>gi|293391845|ref|ZP_06636179.1| putative inner membrane protein translocase component YidC
           [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952379|gb|EFE02498.1| putative inner membrane protein translocase component YidC
           [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 536

 Score =  341 bits (873), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 144/561 (25%), Positives = 246/561 (43%), Gaps = 38/561 (6%)

Query: 7   YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66
               + +S I+   WQ  Y  P+         +   V   + V N+  A          +
Sbjct: 2   VIALLFMSFIVYQQWQLDYHTPKPVTTEQTAASASDVPASSNVGNAVIAT------DTQA 55

Query: 67  MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126
               + L+N      IN  G       L  Y  ++ SN+P + L   +  ++ Y A+   
Sbjct: 56  KGKIITLENDVFRLKINTLGGDVVSSELLKYDAELDSNTPFMLL--QNTPQHVYIAQSGL 113

Query: 127 VSTANNIELPNSNTVWNLISGKILTPTT---PIKLVFKNANNILFERTISLDEHYLFKIV 183
           +                      L        + LV+        +        Y   + 
Sbjct: 114 IGKNGIDTKSGRADYQADGDNFKLADGQNELSVPLVYVKDGVTYRKVFTLKRGEYNIAVN 173

Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243
             + N S   I   P G++     +++ N         A    ++  ++      +++  
Sbjct: 174 YEINNQSDKTIEVEPYGQLRHTLVESSGNVAMPTYTGGAYSSSETNYKKYSFSDMENANL 233

Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303
           + +    W+ +   Y+ S +IP+++                    +     +I P  + T
Sbjct: 234 SINTKAGWVAVLQHYFVSAWIPNQDADNQLYTLIDKAN-NIGSIGYRGPVTSIQPNTTET 292

Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363
            T+ L+ G K    +            ++ +D+GW +FIAKP+F L+++   LV N+G+A
Sbjct: 293 LTSKLWTGPKLQNEMAQVAN-----HLDLTVDYGWAWFIAKPLFRLLTFIQKLVHNWGVA 347

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++LYK   
Sbjct: 348 IICVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERF-GEDRQRMSQEMMKLYKDEK 406

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           +NPL GC P+LLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP             
Sbjct: 407 VNPLGGCLPLLLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----------- 455

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
                   I PI+M  SMF+  KMSP P AD  Q  ++ +MP++F+     FPAGL++YW
Sbjct: 456 --------ILPILMGGSMFLLQKMSPTPVADPIQQKVMTFMPLIFMVFFLWFPAGLVLYW 507

Query: 543 SWSNVISIVQQAVIMKMHGAE 563
             SN+I+I+QQ +I +    +
Sbjct: 508 LVSNLITIIQQQLIYRGLEKK 528


>gi|254363130|ref|ZP_04979180.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia
           haemolytica PHL213]
 gi|261491963|ref|ZP_05988540.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|261496234|ref|ZP_05992639.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|153095021|gb|EDN75576.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia
           haemolytica PHL213]
 gi|261308065|gb|EEY09363.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261312430|gb|EEY13556.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia
           haemolytica serotype A2 str. BOVINE]
          Length = 541

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 135/568 (23%), Positives = 251/568 (44%), Gaps = 40/568 (7%)

Query: 2   ERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
             N    +     +S++I   WQ  +      E+  +++     +     D   A+   +
Sbjct: 1   MNNRGLLLMGLFLVSILIFTQWQQDFDP----EIQAQKQAQVAAQTQQAGDLPSASNANN 56

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A +++    + +++  L  +I+  G      +L  ++ ++ SN+P   L    +    
Sbjct: 57  PIADSITQGKTITVESDVLRLTIDTLGGDVIGSDLLKHNAELHSNTPFKLL--QQDGDKI 114

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTT---PIKLVFKNANNILFERTISLDE 176
           Y A+   V                      L        + L F+    +  +       
Sbjct: 115 YVAQSGLVGKNGIDTNAGRPQYAVTADSFKLAEGQNEISVPLTFEKEGVVYTKTFTLKRG 174

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            Y   +   + NN+   I   P G++     +++ N         A    ++  ++    
Sbjct: 175 SYDVGVNFNIKNNTAQAIEVQPYGQLKHSIVESSGNLTMPTYTGGAYSSSETNYKKYSFQ 234

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
             + +  +      W+ +   Y+ S ++P+++       +  +         +     TI
Sbjct: 235 DMEKANLSVDTKAGWIAVLQHYFVSAWVPNQDADNSLYSRTNNG---VATIGYRGPLTTI 291

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
            P       + L+ G+K+   +            ++ +D+GW +FIAKP+F L++    +
Sbjct: 292 APNSEANLNSKLWTGSKDQKEMGESAN-----HLDLTVDYGWAWFIAKPLFWLLTAIQKI 346

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           V N+G+AI+  T+ VK + +PL K QY S A M+ +QP+I E+RE+F     Q + + M+
Sbjct: 347 VSNWGLAIIGVTIVVKTILYPLTKAQYTSMAKMRMLQPRITEMRERFGD-DRQRMSQEMM 405

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LY+   +NP+ GC PIL+Q+P+F A+Y     ++E+RHAPF+GWI+DL+A DP      
Sbjct: 406 KLYREEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY---- 461

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535
                          I P++M  SMF+  KMSP P AD  Q  ++ +MPV+F      FP
Sbjct: 462 ---------------ILPLLMGGSMFLLQKMSPTPVADPVQQKVMTFMPVIFTVFFLWFP 506

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           +GL++YW  SN+I+I QQ +I +    +
Sbjct: 507 SGLVLYWLTSNLITIAQQWLIYRNLEKK 534


>gi|157144347|ref|YP_001451666.1| putative inner membrane protein translocase component YidC
           [Citrobacter koseri ATCC BAA-895]
 gi|166975859|sp|A8ACL7|OXAA_CITK8 RecName: Full=Inner membrane protein oxaA
 gi|157081552|gb|ABV11230.1| hypothetical protein CKO_00051 [Citrobacter koseri ATCC BAA-895]
          Length = 548

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ S  P   L   +  +  Y
Sbjct: 51  GVPASGQGKLITVKTDVLDLTINTRGGDVEQALLPTYPKELGSKEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYSVDNDTFVLADGQNELHVPMTWTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGEYAVNVNYSVQNAGEKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N   +  W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSNGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|270158408|ref|ZP_06187065.1| inner membrane protein OxaA [Legionella longbeachae D-4968]
 gi|289166753|ref|YP_003456891.1| cytoplasmic insertase into membrane protein, Sec system [Legionella
           longbeachae NSW150]
 gi|269990433|gb|EEZ96687.1| inner membrane protein OxaA [Legionella longbeachae D-4968]
 gi|288859926|emb|CBJ13912.1| cytoplasmic insertase into membrane protein, Sec system [Legionella
           longbeachae NSW150]
          Length = 555

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 144/579 (24%), Positives = 255/579 (44%), Gaps = 41/579 (7%)

Query: 2   ERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
                  + +AL   S+ +  AWQ  Y        +       +     Q+  S A    
Sbjct: 1   MDIRRVILYMALALISLSLWNAWQIDYPTKPAPTDSAITNQQNSEPLLPQMAPSTAVATS 60

Query: 59  DDRAQ--ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
              A     S +P + +K   L   I+L+        L  Y   +   +    LL     
Sbjct: 61  ITPANDVKTSNAPIIHVKTDVLDIGIDLQQGDIVSSQLLAYPQSIEEKNKPFLLLQNQPN 120

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFERTISL 174
           +    +   +V++  NI+  N N        ++        + L  KN + +  ++  + 
Sbjct: 121 ERYIASSNLFVASGQNIQALNFNFTSPQQQYELDPNQKQLVVTLNGKNGDGLDVKKEFTF 180

Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA----VLGDKSL 229
               Y+  +   + N    +       +++R  P+   ++      +        G    
Sbjct: 181 TKGSYVIDVEYKIVNQGNGEWTGYMNTQLIRSSPKEDKSSVFHVGSYTGASYSEPGKHRY 240

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
            +  +SD+ K+++        W+ +   Y+ S +IP   ++     + +++    Y    
Sbjct: 241 QKVSFSDMNKTNLD-VDSKGGWVAMQQHYFLSAWIPDVNSTNKFYTRAVNND---YTIGA 296

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            +  IT+ P +  T  + L+ G +   T+         P  ++ +D+G  +F++  +F L
Sbjct: 297 VSQPITLQPSQEKTLGSKLYVGPEITSTLKGIA-----PSLDLTVDYGILWFLSSLLFSL 351

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           M    N+VGN+G +I+L TV +KL F+ L+   Y S A M+ +QPK+  LRE++     +
Sbjct: 352 MKIINNVVGNWGWSIVLVTVLIKLAFYRLSAASYKSMAGMRKLQPKLQALRERYGDDKAK 411

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + +A ++LYK   +NPL GC PIL+QIPVF A+Y V+  S+E+R APF  WIKDL+ AD
Sbjct: 412 -ISQATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFILWIKDLSDAD 470

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529
           P +                   + P+IM  +M IQ K++P P D  QA ++ ++PV+F  
Sbjct: 471 PYH-------------------VLPLIMGATMLIQQKLNPAPPDPMQAKVMMFLPVLFTG 511

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
              SFPAGL++YW  +N +SI+QQ  I +    E     
Sbjct: 512 LFWSFPAGLVLYWIVNNTLSILQQWYITRKFSDEKPAKK 550


>gi|222112701|ref|YP_002554965.1| yidc translocase/secretase [Acidovorax ebreus TPSY]
 gi|221732145|gb|ACM34965.1| YidC translocase/secretase [Acidovorax ebreus TPSY]
          Length = 569

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 136/592 (22%), Positives = 231/592 (39%), Gaps = 55/592 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNERK--------NIQT 42
           M       + +     +V  W            F+  P  +  +            ++  
Sbjct: 1   MNDIRRTILWVIFGFSMVLLWDKWQIHNGNKATFFPTPPAQTASTPAVAASGAGAADVPV 60

Query: 43  VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
                    +           A     RV +    L  S + +G       L  Y     
Sbjct: 61  AAASATPGAAPQPPAGASVPPAAIPRERVTVSTDVLRLSFDSEGGSLVHGELLQYPEMED 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV--- 159
              P   LL   +    Y A+   +        P   T   ++ G         +L    
Sbjct: 121 KTKPF--LLLDESASRVYVAQTGLIGNGAGGAFPTHKTPMAVVPGPRELQDGQNELTVRF 178

Query: 160 --FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFG 215
                    L +        Y   +   V N     +      ++ R    P   ++ + 
Sbjct: 179 ESADMGGVKLVKTWTLKRGAYDVAVKHEVVNTGTAPVSPQLYLQLARDGNKPAGESSFYS 238

Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274
              G       K   + ++ DIE      +   SN ++ +   Y+A+ ++        + 
Sbjct: 239 TFTGPAVYTEAKKYHKVEFKDIENGKAEIDKSSSNGYVAMVQHYFATAWLLGDGVQRDNF 298

Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
            + +      Y          I PG+S      LFAG +    +         P  E++ 
Sbjct: 299 VRKVD--TNLYSVGMITPLGEIAPGQSKAVDARLFAGPQIETLLEKLA-----PGLELVK 351

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           D+GW   +AKP++ L+   + ++GN+G +I+     +K+ F+ L  K Y S A MK I P
Sbjct: 352 DYGWLTILAKPLYWLLDQLHKVLGNWGWSIVALVFLLKIAFYWLNAKAYASMAKMKAINP 411

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           +I E+RE+ K   PQ +Q+ M+++Y+   +NP+ GC PI++QIPVF A+Y V+  S+EMR
Sbjct: 412 RIMEMRERLKD-KPQQMQQEMMRIYREEKVNPMGGCLPIMIQIPVFIALYWVLLSSVEMR 470

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
           +AP+ GWIKDL++ DP                     I P++M+LS  +Q  ++P P D 
Sbjct: 471 NAPWIGWIKDLSSPDPFF-------------------ILPLLMTLSSLLQTALNPAPPDP 511

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
            QA ++  MP++F      FPAGL++YW  +N++SI QQ +I    G     
Sbjct: 512 MQAKMMWLMPLMFSVMFFFFPAGLVLYWLTNNILSIAQQWIINTRMGVPPQF 563


>gi|190570482|ref|YP_001974840.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019241|ref|ZP_03335048.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190356754|emb|CAQ54113.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995350|gb|EEB55991.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 569

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 216/563 (38%), Positives = 333/563 (59%), Gaps = 18/563 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N  +A  LS++I+  W   Y        +  + +I+ ++      N  A ++  +
Sbjct: 1   MSEAKNLILATILSILIIVLWHIIYDNF--LNTSQSQPSIENIEHIESS-NDLAPMIYQN 57

Query: 61  RAQALSM--SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           R++ ++     RV L N  L GSI+LKGA+FDDL L  YHL+ SS+SP V LLSP+ +K+
Sbjct: 58  RSEIINSTREQRVNLTNNMLEGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESKD 117

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            YFAE  ++     I++P+S TVW             + L + N N ILF   ISLD++Y
Sbjct: 118 VYFAEFGWLDPNEKIKVPDSKTVWQADKLN----QKEVNLFWDNENGILFRMKISLDDNY 173

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
           +FK+   + NN+ D +   P G+I R +     + +   EG +    +  L E  Y DI 
Sbjct: 174 MFKVEQIIENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFNN-KLEEWTYKDIS 232

Query: 239 KSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITI 296
           K  +     S  SW G +DKYW +  IP K    +   K+ + +   ++Q  F      I
Sbjct: 233 KKRLIKASTSEKSWFGFADKYWFTAIIPEKSDQINVSIKHTNVNNIDKFQVDFVKPYKHI 292

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
           LPG S++T N+ FAGAK+   +  Y+  L IP F+  +D+G  YFI KP+F+L+ YF  +
Sbjct: 293 LPGASVSTLNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFV 352

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           + NFG+AI+L T+ +KLL  PL+ + Y+S   +K++QP++  ++E +K    +   K  I
Sbjct: 353 LKNFGLAILLLTLVIKLLMLPLSNRSYISMFKVKSLQPELTRIKELYKNDSLK-QHKETI 411

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            L+K +N+NP++  +P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL+A+DPTNIFTL
Sbjct: 412 ALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLSASDPTNIFTL 471

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFALSS 533
           FG+  +  P  + +GI PII   +M IQ K+S       D  Q  ++ ++P + VF  SS
Sbjct: 472 FGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFSS 529

Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556
           FPAGL+IYW +SN+I++VQQ++I
Sbjct: 530 FPAGLVIYWIFSNIITLVQQSLI 552


>gi|120613420|ref|YP_973098.1| protein translocase subunit yidC [Acidovorax citrulli AAC00-1]
 gi|120591884|gb|ABM35324.1| protein translocase subunit yidC [Acidovorax citrulli AAC00-1]
          Length = 565

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 134/589 (22%), Positives = 238/589 (40%), Gaps = 53/589 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M       + +     +V  W  +         +    +               P  V  
Sbjct: 1   MNDIRRTILWVIFGFSMVLLWDKWQVHNGHKATFFPEPVPAQVASAPAGGGASAPGSVPT 60

Query: 52  SYAAVLIDDRAQALSMS--------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
             AA     +      +         RV +    L  + + +G       L GY      
Sbjct: 61  PSAAPAAGTQQVPGGTAAAAPAAPRERVTVTTDVLRLTFDSEGGTLTHGELLGYPDMADK 120

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN- 162
           + P   L    + +  Y A+   +    N     +       +  +      I + F++ 
Sbjct: 121 SRPFTLL--DDSAQRVYVAQTGLIG-GANYPTHKTPMTVVPGNRTLQDGQNDISIRFESP 177

Query: 163 --ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQE 218
                 L +        Y   +   V N     +      +++R    P   ++ +    
Sbjct: 178 DLGGVKLVKTWTVKRGAYDIAVKHEVVNTGTTPVSPQLYMQLVRDGNKPPGESSFYSTFT 237

Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKY 277
           G       +   + ++ DIE         S N ++ +   Y+A+ ++ +         + 
Sbjct: 238 GPAVYTEARKYHKVEFKDIESGKAEIDKSSTNGYVAMVQHYFATAWLLADGIQRDLFVRK 297

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337
           +      Y      +   I PG+S T    LFAG +    +         P  E++ D+G
Sbjct: 298 VD--TNLYSVGMITSVGEIAPGQSKTLDARLFAGPQIETMLEKLS-----PGLELVKDYG 350

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W   +AKP++ L+   + ++ N+G +I+   + +K+ F+ L  K Y S A MK I PKI 
Sbjct: 351 WLTILAKPLYWLLEQLHKILNNWGWSIVGLVLLLKIAFYWLNAKAYASMAKMKAINPKIM 410

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           E+RE+ K   PQ +Q+ M+++Y+   +NP+ GC+PI++QIPVF A+Y V+  S+EMR+AP
Sbjct: 411 EMRERLKD-KPQQMQQEMMRIYREEKVNPMGGCFPIMIQIPVFIALYWVLLSSVEMRNAP 469

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           + GWI DL++ DP                     I P++M+ S  +Q  ++P P D  QA
Sbjct: 470 WIGWIHDLSSPDPFF-------------------ILPLLMTASSLLQTALNPAPPDPMQA 510

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
            ++ +MP++F      FPAGL++YW  +N++SI QQ +I K  G     
Sbjct: 511 KMMWFMPLIFSVMFFFFPAGLVLYWLTNNILSIAQQWIINKRMGVPPQF 559


>gi|86147168|ref|ZP_01065484.1| putative inner membrane protein translocase component YidC [Vibrio
           sp. MED222]
 gi|218708091|ref|YP_002415712.1| putative inner membrane protein translocase component YidC [Vibrio
           splendidus LGP32]
 gi|254778171|sp|B7VGH7|OXAA_VIBSL RecName: Full=Inner membrane protein oxaA
 gi|85835052|gb|EAQ53194.1| putative inner membrane protein translocase component YidC [Vibrio
           sp. MED222]
 gi|218321110|emb|CAV17060.1| Inner membrane protein oxaA [Vibrio splendidus LGP32]
          Length = 539

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 137/570 (24%), Positives = 242/570 (42%), Gaps = 43/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         E+    +        +         
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWNVAQNPAPQAVEQAQSGSTLPAPSYADDLDPAPGQ- 58

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
               ++ +  + +    L  SI+  G      NL  Y  +  S    V L   +   + +
Sbjct: 59  ----VASAKTITVTTDVLTLSIDTVGGDVVTANLNDYSAEFDSEDTFVLL--KNEPGHQF 112

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V          +   + + +             I + ++       +  +    
Sbjct: 113 IAQSGLVGPQGIDLSSTNRPSYTVSADSFTLAEGQDELRIPMTYQANGLDYTKTFVLKRG 172

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   V NNS +   F     + ++      + T     G      D    +  + 
Sbjct: 173 SYAIDVEYDVVNNSGNNATFGMYAHLRQNVMDDGGSLTMPTYRGGAYSTEDTRYKKYSFD 232

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S    +   W  +   Y+AS +IP  E   +   + + +              
Sbjct: 233 DMQDRNLSLNLANGQGWAAMIQHYFASAWIPRDEAGSNLYTRVIGNLGD---IGVRMPNK 289

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G   +    L+ G K    +         P  ++++D+GW +FIAKP+  L+S+  
Sbjct: 290 TIATGDEASFKATLWVGPKLQDQMAAVA-----PNLDLVVDYGWLWFIAKPLHTLLSFIQ 344

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
            +V N+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 345 GIVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGD-DRQRMSQE 403

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F ++Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 404 MMELYKKEKVNPLGGCLPILLQMPIFISLYWALMESVELRHSPFFGWITDLSAQDPYY-- 461

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 462 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 504

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I +    +
Sbjct: 505 FPSGLVLYWLVSNIVTLIQQTLIYRALEKK 534


>gi|146313779|ref|YP_001178853.1| putative inner membrane protein translocase component YidC
           [Enterobacter sp. 638]
 gi|166975863|sp|A4WGH2|OXAA_ENT38 RecName: Full=Inner membrane protein oxaA
 gi|145320655|gb|ABP62802.1| protein translocase subunit yidC [Enterobacter sp. 638]
          Length = 548

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 143/572 (25%), Positives = 254/572 (44%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQQQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A     ++ +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKQITVKTDVLELTINTRGGDIEQALLLTYPKELKSNEPFQLL--ETTPEFLY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               I + + +A    F +T +L 
Sbjct: 109 QAQSGLTGRDGPDNPANGARPLYNVDKDTFVMADGQNELAIPMTYTDAAGNTFTKTFTLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N S   +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGEYAVSVGYNVQNTSAKPLEVSTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDT 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ ++P+ +   +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSAKGGWVAMLQQYFATAWVPNNDGVNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++ T  + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGTLGSTLWVGPEIQNKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIAAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGITMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533


>gi|119471654|ref|ZP_01614039.1| preprotein translocase [Alteromonadales bacterium TW-7]
 gi|119445433|gb|EAW26720.1| preprotein translocase [Alteromonadales bacterium TW-7]
          Length = 544

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 139/570 (24%), Positives = 249/570 (43%), Gaps = 39/570 (6%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME     F+ I L   S ++   W N Y  P+++     +       + +    S +   
Sbjct: 1   MESQR-TFLFIGLMLVSFLLFQEWNNDYNQPKVDPSATTQTQQANSTESDDFIPSSSESG 59

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
           +   +  L+    +E+        I+ KG    + +L  Y       +P + L       
Sbjct: 60  LPA-STTLAKRSVIEITTDVFKVKIDTKGGDIVESDLLQYEEVKGEETPFMLLGEFDG-- 116

Query: 118 NAYFAELDYVSTANNIELPNSNTVWN--LISGKILTPTTPIKLVFKNANNILFERTISL- 174
           N YF++   +         N    ++    S  +      + L F ++N + F +T    
Sbjct: 117 NQYFSQSGLIGLNGPDASANGRPTYHSEQTSYTLTGDELRVPLQFTDSNGVSFTKTYVFK 176

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
              Y   +  TV N +   I+     ++ R   +  +       G      ++   +  +
Sbjct: 177 KGQYDVGLEYTVNNTTSAPIQVQLYTQVKRTVQEKGSLVDQNYLGAAYGTDEEPYEKYSF 236

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           SD+   +++       ++     Y+ S ++P ++    +    L            A  +
Sbjct: 237 SDMADKNLNE-STQGGYIAFIQHYFVSAWVPKQDQ--TNTLYSLITSSNAAIIGTKAEPV 293

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
            +  G   T T+  + G KE   +         P  ++ +D+GW +FI++P+F+L+ + Y
Sbjct: 294 NVQAGSEQTITSIYYMGPKESDVLEALH-----PDLDLTVDYGWLWFISQPLFVLLKWLY 348

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           +++GN+G+AI+  T+ VK L +PL K QY S A M+ +QPK+  L+EK+     Q   +A
Sbjct: 349 SILGNWGLAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMAALKEKYGD-DRQKFGQA 407

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
            +++YK   +NP+ GC+PILLQ+P+F A++ V   S E+RHA F  W+ DL+A DP    
Sbjct: 408 TMEMYKKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFMLWLTDLSAQDPYY-- 465

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            + PI+   SMFI  K+ P    D  Q  ++ +MPV+F      
Sbjct: 466 -----------------VLPILFGASMFITQKLQPMTVTDPMQQKMMTFMPVIFSVFFLW 508

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+ISI Q   I +    +
Sbjct: 509 FPSGLVLYWLVSNLISIAQMLYIYRGMEKK 538


>gi|188535565|ref|YP_001909362.1| putative inner membrane protein translocase component YidC [Erwinia
           tasmaniensis Et1/99]
 gi|254772784|sp|B2VCE6|OXAA_ERWT9 RecName: Full=Inner membrane protein oxaA
 gi|188030607|emb|CAO98502.1| Inner membrane protein OxaA [Erwinia tasmaniensis Et1/99]
          Length = 548

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 142/574 (24%), Positives = 244/574 (42%), Gaps = 57/574 (9%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N F+   + +S +I  AWQ       +              Q  Q   S A   +
Sbjct: 1   MDSQRNLFLIAFLFVSFMIWQAWQTDNAPQPL------------QTQTTQNTTSAAGDAV 48

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           +    A      + +K   L  +IN +G   D   L  Y   + S+ P   LL  S    
Sbjct: 49  NQGVPASGQGKTITVKTDVLSLNINTRGGDIDQAQLLTYPDKLGSDQPF--LLLESTPGF 106

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTIS 173
            Y A+             N                       I L F   N + + +T  
Sbjct: 107 LYQAQSGLTGRNGPDNPANGARPLYTSGQDHFELANGQGELRIPLTFTAENGVTYTKTFV 166

Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227
           L    Y   +   + N +   +  S  G++ +         T ++ F +     A     
Sbjct: 167 LKRGEYAIGVDYQINNTTQQPLEVSMFGQLKQTIDLPKHRDTGSSNFALHTFRGAAYSSS 226

Query: 228 S--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
                + K+  I  +   +   +N W+ +  +Y+A+ ++P    S        + G+   
Sbjct: 227 ETNYEKYKFDTIRDNENLSTTTNNGWVAMLQQYFATAWVPQTAGSNT--LYTSNLGNGVA 284

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
              + +  + +  G        L+ G +    +         P  ++ +D+GW +FI++P
Sbjct: 285 AIGYKSAPVIVAAGSQQQLAATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQP 339

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+ + +  +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+   
Sbjct: 340 LFKLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q + + M+ LYK   +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL
Sbjct: 400 DK-QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDL 458

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524
           AA DP                     I PI+M ++MF   KMSP    D  Q  I+ +MP
Sbjct: 459 AAQDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           V+F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533


>gi|119900278|ref|YP_935491.1| propable 60 Kd inner-membrane protein [Azoarcus sp. BH72]
 gi|119672691|emb|CAL96605.1| propable 60 Kd inner-membrane protein [Azoarcus sp. BH72]
          Length = 538

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 145/566 (25%), Positives = 240/566 (42%), Gaps = 41/566 (7%)

Query: 11  IALSVIIVYAWQNFY--VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS 68
           +  ++ +V  W+ +     P + E                   S         A A S +
Sbjct: 1   MVFTLSLVMLWEGWIKHNRPPVTETPTAAAPEAATGAVPTPSASLGGTPAVPAAAAASSA 60

Query: 69  PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128
           PRV++    L   ++ +G     L L  +      +     LL     ++ Y AE   + 
Sbjct: 61  PRVKVVTDVLQAEVSAEGGSIVRLELEKHRATTDRSRGF--LLLDDGERHLYAAESGLIG 118

Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVT 187
           T                  K       ++L     N +   + ++     YL  +   + 
Sbjct: 119 TGLPTHRTRFALPAGDQVLKDGEDRLVLRLEAPEQNGVKVTKVMTFHRGSYLVDVNYEIA 178

Query: 188 NNSIDQIRFSPRGRIMRHKPQTATNT---FGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244
           N   + ++     +  R                 G           + K+SDI++     
Sbjct: 179 NGGAEPVKAHAYYQFTRDGKPAEQVEAFGVTTFTGPAYYTDAAKFQKVKFSDIDEGKAKF 238

Query: 245 FHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303
               ++ W+ +   Y+   ++P          + +  G   Y A    +   + PG +  
Sbjct: 239 AKTANDGWVAMVQHYFVGAWLPEAGVEREYFARKV--GGDLYSAGAIESVADVQPGATGN 296

Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363
               L+ G +E   + +       P  ++++D+GW   IA P+F  +S  + L GN+G A
Sbjct: 297 AQARLYVGPQEQDKLENIA-----PGLDLVVDYGWLTVIAAPLFWALSALHKLTGNWGWA 351

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L TV +K LFFPL+   Y S A M+ + P++  ++E +     ++ Q+ M+ LY+T  
Sbjct: 352 IILVTVALKALFFPLSAASYKSMAKMRVLGPRLQRMKELYGNDKVKM-QQEMMNLYRTEK 410

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           INPL GC PIL+QIPVF A+Y V+  S+EMR AP+ GWI+DL+A DP             
Sbjct: 411 INPLGGCLPILVQIPVFIALYWVLLGSVEMRQAPWLGWIQDLSAKDPYF----------- 459

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
                   I PIIM +SM +QMK++P P D  QA ++  MP+VF F    FP+GL++YW 
Sbjct: 460 --------ILPIIMGVSMLVQMKLNPTPPDPIQAKVMMAMPIVFTFMFLWFPSGLVLYWV 511

Query: 544 WSNVISIVQQAVIMK-----MHGAEI 564
            +NV+SI QQ  I +       GA+ 
Sbjct: 512 VNNVLSIAQQWQITRMIEGGKQGAKT 537


>gi|57239041|ref|YP_180177.1| putative inner membrane protein translocase component YidC
           [Ehrlichia ruminantium str. Welgevonden]
 gi|57161120|emb|CAH58031.1| putative integral membrane protein [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 575

 Score =  340 bits (870), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 211/585 (36%), Positives = 335/585 (57%), Gaps = 25/585 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N   A+ LSV+I+  W+  Y     E+    +  ++     + +      +    
Sbjct: 1   MLEIRNLVFAVVLSVLIMMGWRLVY-----EKFFTVQHVVEDEDSSSMIPEIDNVLTYRS 55

Query: 61  RAQALSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           R + +  +   RV+L N  + GSI+LKGAQ DDL  + YH+   S+S  + LLSP NT+ 
Sbjct: 56  RNEIIDSTQNLRVKLSNKEINGSISLKGAQLDDLVFKNYHITPDSSSDGIILLSPENTEG 115

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            YF E  ++   + I +PN  + W      +L+P   + L + N   ++F+  ++LD++Y
Sbjct: 116 VYFIEFGWIDPQHKIVVPNQLSTWT-SDKSVLSPNNTVTLTWDNQQGVIFQIKVTLDDYY 174

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
           +FKI   + NN+ + +   P GRI R +  T  + +   EG +   G  +L E  Y +I 
Sbjct: 175 MFKIEQIIINNTDNVVNLIPYGRINRARHTTEKSYWISHEGAVGSFGY-TLKEWTYKNII 233

Query: 239 KSSISNFHE----SNSWLGISDKYWASVFIPSKETSFHSQFKYLS----DGHARYQAKFS 290
           K       +     N W+GI+DKYW +  IP+          ++     +   R+Q  FS
Sbjct: 234 KERNIKISQQNTDDNQWVGIADKYWFTALIPNILQKKSKLSFHVKHGKYNNEDRFQVDFS 293

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
            +  +  P K+ ++T++LFAGAKE   +  Y+KDL I  F+  +D+G  YFI KP+F+L+
Sbjct: 294 HDSYSAYPNKTASSTSYLFAGAKELKLLDKYKKDLNISLFDKAVDFGILYFITKPVFLLL 353

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
            YFY+L+GNFG+AI+L T+ +KL+ FPL+ K YVS   +K +QP+I +++E +K    ++
Sbjct: 354 EYFYDLIGNFGLAILLLTIVIKLIMFPLSYKSYVSMFKLKYLQPEILKIKELYKNDNTKM 413

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
             K +  L+K ++++P++G  PIL+QIPVFFA+YKV+ +++EMRHAPF+ W+KDL+  D 
Sbjct: 414 -SKEVSLLFKKNDVSPMSGFIPILIQIPVFFALYKVLFVTIEMRHAPFYLWVKDLSNFDT 472

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-----ADKGQAMILNWMPV 525
            N+ TLFG+L F  P  + +GI P+I+ ++M IQ KM+         DK QA  + ++P 
Sbjct: 473 ANVLTLFGLLNFNPP--ICIGILPVILGITMIIQQKMNTSTHSSQDQDKIQASFIKFLPY 530

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
           VF+F  SSFP GLIIYW  SN I+I+QQ +I    G +  L   L
Sbjct: 531 VFIFIFSSFPTGLIIYWICSNSITIIQQLIIKAYIGRKFNLKHDL 575


>gi|295095341|emb|CBK84431.1| protein translocase subunit yidC [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 547

 Score =  340 bits (870), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 142/572 (24%), Positives = 255/572 (44%), Gaps = 54/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +           + KN Q  +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A     ++ +K   L  +IN +G   +   L  Y  ++ S  P   L   +  +  Y
Sbjct: 50  GVPASGQGKQITVKTDVLELTINTRGGDVEQALLLTYPKELKSTEPFQLL--ETTPEFIY 107

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               I + + +A    F +T +L 
Sbjct: 108 QAQSGLTGRDGPDNPANGARPLYNVENDTFVLADGQNELVIPMTYTDAAGNTFTKTFTLK 167

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 168 RGEYAVNVGYSVQNAGAKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDT 227

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ ++P+ + + +  F   + G+     
Sbjct: 228 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWVPNNDGTNN--FYTANLGNGIAAI 285

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 286 GYKSQPVLVQPGQTGKLASTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 340

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 341 KLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 400

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 401 -QRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 459

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 460 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 500

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 501 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 532


>gi|261250645|ref|ZP_05943220.1| OxaI/YidC membrane insertion protein [Vibrio orientalis CIP 102891]
 gi|260939214|gb|EEX95201.1| OxaI/YidC membrane insertion protein [Vibrio orientalis CIP 102891]
          Length = 541

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 140/570 (24%), Positives = 246/570 (43%), Gaps = 42/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         E+    +        +         
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPTPQPVEQAQSSSTLPAPSFADELDPAP--- 56

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            AQ  + +  + +    L  SI+  G    + +L  Y  ++ S  P V L + +   + +
Sbjct: 57  -AQQQASAKTITVTTDVLTLSIDTVGGDVINADLNQYSNELDSEDPFVLLKNEAG--HQF 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V          +   +++ +             I + F        +  +    
Sbjct: 114 IAQSGLVGPQGIDLSSTNRPAYSVSADSFTLADGQDELRIPMTFTANGLEYTKTFVMKRG 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   + N S +   F     + +       + T     G      D    +  + 
Sbjct: 174 SYAIDVEYDIVNKSGNNATFGMYAHLRQSLLDAGGSITMPTYRGGAYSTEDTRYKKYSFD 233

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S    +   W  +   Y+AS +IP  E   +   + + +              
Sbjct: 234 DMQDRNLSLNLANGQGWAAMIQHYFASAWIPRNEPGANLYTRVIGNLGD---IGVRMPNK 290

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G S      L+ G K    +         P  ++++D+GW +FIAKP+  L+S+  
Sbjct: 291 TIADGDSANFQATLWVGPKLQDQMAEVA-----PNLDLVVDYGWLWFIAKPLHTLLSFIQ 345

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC P++LQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 405 MMELYKKEKVNPLGGCLPLVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 535


>gi|255320707|ref|ZP_05361884.1| inner membrane protein [Acinetobacter radioresistens SK82]
 gi|262380663|ref|ZP_06073816.1| membrane protein insertase, YidC/Oxa1 family protein [Acinetobacter
           radioresistens SH164]
 gi|255302323|gb|EET81563.1| inner membrane protein [Acinetobacter radioresistens SK82]
 gi|262297611|gb|EEY85527.1| membrane protein insertase, YidC/Oxa1 family protein [Acinetobacter
           radioresistens SH164]
          Length = 584

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 140/592 (23%), Positives = 238/592 (40%), Gaps = 64/592 (10%)

Query: 11  IALSVIIVYAWQNFYVYPRIEEMNNER---------KNIQTVKQPNQVDNSYAAVLIDDR 61
             ++ +++ AWQ  Y +                    N Q     + V  +  A      
Sbjct: 14  FVVAYLLILAWQKDYGHAETAPQQQAVVSHEVSADLPNSQAASASSDVPQANIATPQATD 73

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
             A      + ++       IN KG     + L  +  +  S+ P V L   S+ K  Y 
Sbjct: 74  VTAPVNQQLISVQTDLYHLLINPKGGDIVRIELLNHDKNKDSDQPFVML--ESDAKRTYV 131

Query: 122 AELDYVSTANNIELPNSNTVW----------------NLISGKILTPTTPIKLVFKNANN 165
           A+   +         +   V+                +  +GK +   T   +       
Sbjct: 132 AQSGLIGLNGPDSNRSGRPVYEVEKTSYDLLKDAQTVSKDNGKAVKVLTIPMVYKTADGV 191

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFI 221
            + +        Y   +   V N S    +    G+I R   +         F +     
Sbjct: 192 EIIKTFTFKQGEYPIVVNHKVVNRSQQNWQGQMFGQIKRDNSEDPGKSDQGIFTLGTFLG 251

Query: 222 AVLGDKSLVEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSK-------ETSFHS 273
              G       K   D       N      W+ +   Y+ S +IP +          + +
Sbjct: 252 GAWGTPEEHYNKLKFDNFNDEKLNVDAKGGWIAVVQHYFVSAWIPGQLKLTQANGQPYAA 311

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
           + +            F++  I +  G         ++G K    +               
Sbjct: 312 KLESRKSADDMNIISFTSPTINVPAGTVAEVDATFYSGPKIQSELKDLAV-----GLNQT 366

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+GW + IAK +F+ + +F+N+VGN+G +I+L T+ VKL+ +PL+ K Y S A M+ I 
Sbjct: 367 VDYGWLWPIAKLLFLGLQFFHNIVGNWGWSIILLTILVKLILWPLSSKSYRSMAKMRVIA 426

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P++  ++E+F         + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+E+
Sbjct: 427 PEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVEL 485

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           RHAP++GWI+DL+A DP                     I P++M L+MF Q  ++P PAD
Sbjct: 486 RHAPWFGWIQDLSAMDPWF-------------------ILPLVMGLTMFTQQSLNPQPAD 526

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             QA +   MP++F   +  FPAGL++YW  +N I+I+QQ  I +    E  
Sbjct: 527 PMQAKVFKIMPIIFTIFMLFFPAGLVLYWIVNNSITILQQWFINRSVKKERE 578


>gi|117918465|ref|YP_867657.1| protein translocase subunit yidC [Shewanella sp. ANA-3]
 gi|166977418|sp|A0KR32|OXAA_SHESA RecName: Full=Inner membrane protein oxaA
 gi|117610797|gb|ABK46251.1| 60 kDa inner membrane insertion protein [Shewanella sp. ANA-3]
          Length = 541

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 140/564 (24%), Positives = 235/564 (41%), Gaps = 39/564 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +      + +  E   +      +  D   A   +  
Sbjct: 1   MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANATTNHSADVPEADTSVPA 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L   IN  G       L  + L+   + P V L    +    Y
Sbjct: 60  ALTATQN--LITVKTDQLDVQINPVGGDIVFAALVSHKLEQGKDQPFVLLEQTKD--FTY 115

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175
            A+   +              +     +        T  + L +   N + + +      
Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFAANKTEFTLADGQDTLEVPLTYVADNGVTYTKVFVFHR 175

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             +   I   + N S   ++    G+I +    + ++         A        E+   
Sbjct: 176 GKFNVDIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTQDVRYEKYKF 235

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           +    S  N      W  +   Y+ S +IP    S        + G A     F      
Sbjct: 236 EDMSKSNLNQPTLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRGAVYD 293

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I PG +   ++  + G K+   +             +++D+G+ +++A P+  L+ ++ +
Sbjct: 294 IAPGATQEISSQFYVGPKDQKALSALSDT-----LNLVVDYGFLWWLAVPIHWLLMFYQS 348

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F     Q + +AM
Sbjct: 349 FVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGD-DRQKMGQAM 407

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NP+ GC PILLQ+P+F A+Y V+  S E+RHAPF  WI DL+  DP     
Sbjct: 408 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYY--- 464

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533
                           I P++M  SMF+  KM P  P  D  Q  ++ WMP++F      
Sbjct: 465 ----------------ILPLLMGASMFVMQKMQPIAPTMDPMQVKMMQWMPMIFTVFFLW 508

Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557
           FP+GL++YW   N+++I+QQ +I 
Sbjct: 509 FPSGLVLYWLVGNIVAIIQQKIIY 532


>gi|283787595|ref|YP_003367460.1| inner membrane protein [Citrobacter rodentium ICC168]
 gi|282951049|emb|CBG90727.1| inner membrane protein [Citrobacter rodentium ICC168]
          Length = 547

 Score =  339 bits (869), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 138/572 (24%), Positives = 253/572 (44%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLI-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ S+ P   L   +  +  Y
Sbjct: 51  GVPASGQGKLITVKTDVLDLTINTRGGDVEQALLPAYPKELGSSEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDTFVLADGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVLNAGAKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N + +  W+ +  +Y+A+ ++P  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVNANGGWVAMLQQYFATAWVPRNDGTNN--FYTANLGNGVAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|303325515|ref|ZP_07355958.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp.
           3_1_syn3]
 gi|302863431|gb|EFL86362.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp.
           3_1_syn3]
          Length = 551

 Score =  339 bits (869), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 144/581 (24%), Positives = 246/581 (42%), Gaps = 55/581 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAW------QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA 54
           M+ + N  +AI L ++I++ W        +   P    +  +++ ++      +     A
Sbjct: 1   MQDSKNLILAIVLCLVILFGWGRLAEYMGWVQTPDPAAVAQQQEAVRQEAVKAEQRKEEA 60

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
           A      A   +    + + +P         G       L+ +   ++ +SP+V ++   
Sbjct: 61  AKAATLPAFTPAPGRDLTVDSPLYEAVFYTGGGPLRSFKLKKFQTGLAPDSPLVNMVDER 120

Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFE 169
               A    +       N +   S   W+L SG+            ++LV    N  +  
Sbjct: 121 TAAVAPLGLVI------NSQPSWSTGQWSLDSGEQNLKLDAGQQGALRLVGVVDNLRVIR 174

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
                 + YL K    + N             +       A   +      +A   D SL
Sbjct: 175 ELTFNADSYLIKEKIRLINAGDQPRSVRVSYTVASDASNAAGGRYDS--MRVAWDNDGSL 232

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
            E+  S   +S+         W G    Y+ S  +P      ++           Y+   
Sbjct: 233 SEESSSKTLESTGVQATGKIYWAGAMSTYFLSAVLP---GETNNVTVKGLLQKTVYRTAV 289

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
              E  + PG+    T   + G K+   +               ID G F  IAK +  L
Sbjct: 290 EEPENLLAPGQEKELTVSYWLGPKDRTQLLAVSDQ-----LAKSIDLGMFSIIAKGLLWL 344

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + +F+  V N+G+AI+L T+ +K +F+PL  K Y S   MK +QP +  +REK+K +   
Sbjct: 345 LEFFHKYVHNWGVAIILLTIVIKAVFWPLTAKSYASMEKMKKLQPMMTAIREKYKDNKE- 403

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GW 461
           ++ K ++ LYKT+ +NP +GC PIL+Q+PVFF +Y+ +  S+E+RHAPF          W
Sbjct: 404 LMNKEVMALYKTYGVNPASGCVPILIQLPVFFGLYQALLTSIELRHAPFIMYLPFTDKLW 463

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
           + DL+A DP                     I P+IM L+MF+Q +MSPP  D  Q  I+ 
Sbjct: 464 LADLSAKDPYY-------------------ITPVIMGLTMFLQQRMSPPATDPTQQKIMM 504

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           ++P++F      FP+GL+IYW  +N++SI QQ ++M+ + A
Sbjct: 505 FLPLIFTVLFLGFPSGLVIYWLVNNILSIFQQWLMMRKNKA 545


>gi|296105489|ref|YP_003615635.1| putative inner membrane protein translocase component YidC
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295059948|gb|ADF64686.1| putative inner membrane protein translocase component YidC
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 546

 Score =  339 bits (868), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 250/572 (43%), Gaps = 55/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +           E+      +Q      S      D 
Sbjct: 1   MDSQRNLLI-IALLFVSFMIWQAW-----------EQDKNPQPQQQTTQTTSSQGSAADQ 48

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A     ++ +K   L  +IN +G   +   L  Y  ++ S  P   L   +  +  Y
Sbjct: 49  GVPASGQGKQITVKTDVLELTINTRGGDVEQALLLTYPKELKSTEPFQLL--ETTPEFIY 106

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               I + + +A    F +T +L 
Sbjct: 107 QAQSGLTGRDGPDNPANGARPLYNVENDTFVLADGQNELVIPMTYTDAAGNTFTKTFTLK 166

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 167 RGEYAVNVGYSVQNAGAKPLEVSTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDA 226

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP+ + + +  F   + G      
Sbjct: 227 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPNNDGTNN--FYTANLGKGIAAI 284

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 285 GYKSQPVLVQPGQTGKLASTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 339

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 340 KLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 399

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 400 -QRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 458

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 459 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 499

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 500 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 531


>gi|119773151|ref|YP_925891.1| inner membrane protein, 60 kDa [Shewanella amazonensis SB2B]
 gi|166977413|sp|A1S1G5|OXAA_SHEAM RecName: Full=Inner membrane protein oxaA
 gi|119765651|gb|ABL98221.1| inner membrane protein, 60 kDa [Shewanella amazonensis SB2B]
          Length = 541

 Score =  339 bits (868), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 138/570 (24%), Positives = 237/570 (41%), Gaps = 39/570 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +      +         Q   Q    D   A   +  
Sbjct: 1   MESQRNLLL-IGLLFVSFLLWQQWESDKAPKPATEVTAAAQIHDQAINSDVPTADAGVPA 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +    L   IN  G       L  + L+ +  +P V L   +N   +Y
Sbjct: 60  TVAATQN--LILVTTDQLEIQINPVGGDIVHAALLTHKLEQNEEAPFVLLEQKNN--FSY 115

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175
            A+   +         +    +   +          T  + L       + F +      
Sbjct: 116 IAQSGLIGRDGIDSAASGRAKFAAAADAYTLADGQDTLEVPLTLTTDAGVTFTKVFVFKR 175

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             +   +   V NNS   ++    G+I +    + ++         A        E+   
Sbjct: 176 GQFDVGVDYRVANNSAAPVQVQMYGQIKQTITASESSMMMPTYRGAAFSTADVRYEKYSF 235

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D              W+ +   Y+ S ++P+            + G A     F  +   
Sbjct: 236 DDMGKKDLEEPTLGGWVAMLQHYFVSAWVPAAADKNTLFTSVSAGGLAN--IGFKGSVHD 293

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           + PG + T +   + G K+   +             +++D+G+ +++A P+  ++ +F +
Sbjct: 294 VAPGATETISATFYVGPKDQAALSALSDT-----LNLVVDYGFLWWLAVPIHWILMFFQS 348

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           LV N+G+AI+L T+ V+ L +PL K QYVS A M+N+QPK+ +L+++F     Q + +AM
Sbjct: 349 LVHNWGVAIILVTLTVRGLLYPLTKAQYVSMAKMRNLQPKLQDLKDRFGD-DRQKMGQAM 407

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NP+ GC PILLQ+P+F A+Y V+  S+E+RHAPF  WI+DL+  DP     
Sbjct: 408 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWIQDLSVQDPYY--- 464

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533
                           + P++M  SM+   KM P  P  D  Q  +L WMP++F      
Sbjct: 465 ----------------VLPLLMGASMWAMQKMQPMAPNMDPMQQKMLQWMPMIFTVFFLW 508

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FPAGL++YW   N+++I QQ +I      +
Sbjct: 509 FPAGLVLYWLVGNLVAITQQKIIYASLEKK 538


>gi|332995877|gb|AEF05932.1| inner membrane protein, 60 kDa [Alteromonas sp. SN2]
          Length = 550

 Score =  339 bits (868), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 138/578 (23%), Positives = 253/578 (43%), Gaps = 46/578 (7%)

Query: 1   MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTV-------KQPNQVDN 51
           ME   +   + +AL S ++   WQ  Y    ++++  E+    +         Q   V  
Sbjct: 1   MESQRSFLIIGLALVSFLLWQQWQKEYGPQPVQQVQTEQAEQVSQGVPSFDDAQSEDVPT 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
             +       A A + +  +E+K   L   I+L G      +L  + +   S  P   L 
Sbjct: 61  GDSVPAAKPMASASNANRIIEVKTDGLDLRIDLLGGDVITADLLKFPVTQGSEEPYSLL- 119

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVFKNANNILFE 169
              +  N Y A+   +         +   V+   S   ++   T  + LV+KN   +   
Sbjct: 120 --RSGNNLYVAQSGLIGANGPDASSSGRPVYRTDSNFYEMTGDTLEVPLVWKNDQGLTVT 177

Query: 170 RTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAVLGD 226
           +T     +HY   +  TV NNS          ++ +                G      +
Sbjct: 178 KTFIFKKDHYNVAVNYTVQNNSGAAANVQQYAQLKQVIDAEDDGNMFMPTYRGAAYSTEE 237

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
               +  + DI    +        W G+ + Y+ S ++P ++       + +S+ +A   
Sbjct: 238 DRYQKYTFDDIADDKLRET-TKAGWAGMLEHYFVSAWVPPQDQVNTIYSRNISNQYAV-- 294

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
                    +  G++ T ++ L+ G K+   +    +       ++ +D+G  ++I++ +
Sbjct: 295 IGVLMPAAVVNTGEAKTLSSTLYMGPKDQDKLKEIAR-----GLDLTVDYGILWWISQSL 349

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+++ ++LV N+G+AI+L T+ VK   + L KKQY S A M+N+ PK+ +L+++F   
Sbjct: 350 FSLLTFLHSLVNNWGVAIILITIVVKGAMYWLTKKQYESMARMRNLAPKMQQLKDRFGD- 408

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q + ++M++LYK   +NP+ GC P++LQ+P+F A+Y V+  S+E+RHA F  WI DL+
Sbjct: 409 DRQKMSQSMMELYKKEKVNPMGGCLPLVLQMPIFLALYWVLMESVELRHADFALWITDLS 468

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
             DP                     + PI+   SM++  K+ P    D  Q  I+ +MPV
Sbjct: 469 VKDPYF-------------------VLPILTGASMYLLQKLQPTTITDPMQQKIMQFMPV 509

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                   FPAGL++YW  SN+I++VQ  +I       
Sbjct: 510 AMSVFFLWFPAGLVLYWLVSNIITLVQAKMIYASMEKR 547


>gi|168235484|ref|ZP_02660542.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|194734490|ref|YP_002116785.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|204928556|ref|ZP_03219755.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|254778160|sp|B4TN10|OXAA_SALSV RecName: Full=Inner membrane protein oxaA
 gi|194709992|gb|ACF89213.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197291370|gb|EDY30722.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204321989|gb|EDZ07187.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|320088263|emb|CBY98025.1| Inner membrane protein oxaA [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322617246|gb|EFY14151.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315996572]
 gi|322619066|gb|EFY15952.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-1]
 gi|322625133|gb|EFY21961.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-3]
 gi|322630184|gb|EFY26955.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-4]
 gi|322634390|gb|EFY31124.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-1]
 gi|322635275|gb|EFY31990.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-2]
 gi|322642901|gb|EFY39485.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 531954]
 gi|322647619|gb|EFY44106.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. NC_MB110209-0054]
 gi|322650575|gb|EFY46982.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. OH_2009072675]
 gi|322656399|gb|EFY52691.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. CASC_09SCPH15965]
 gi|322661579|gb|EFY57802.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 19N]
 gi|322661660|gb|EFY57879.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 81038-01]
 gi|322668226|gb|EFY64384.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MD_MDA09249507]
 gi|322672845|gb|EFY68953.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 414877]
 gi|322674974|gb|EFY71060.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 366867]
 gi|322683664|gb|EFY79677.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 413180]
 gi|322687740|gb|EFY83709.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 446600]
 gi|323192045|gb|EFZ77280.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609458-1]
 gi|323200527|gb|EFZ85605.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556150-1]
 gi|323204953|gb|EFZ89938.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609460]
 gi|323206696|gb|EFZ91653.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 507440-20]
 gi|323211768|gb|EFZ96601.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556152]
 gi|323218630|gb|EGA03337.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB101509-0077]
 gi|323220031|gb|EGA04501.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB102109-0047]
 gi|323224801|gb|EGA09066.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB110209-0055]
 gi|323232490|gb|EGA16592.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB111609-0052]
 gi|323235265|gb|EGA19350.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009083312]
 gi|323241053|gb|EGA25090.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009085258]
 gi|323241397|gb|EGA25429.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315731156]
 gi|323248628|gb|EGA32558.1| membrane protein insertase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252073|gb|EGA35933.1| membrane protein insertase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258623|gb|EGA42286.1| membrane protein insertase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262346|gb|EGA45904.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008284]
 gi|323268182|gb|EGA51658.1| membrane protein insertase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270596|gb|EGA54041.1| membrane protein insertase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 548

 Score =  339 bits (868), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 142/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +  +            + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|190150778|ref|YP_001969303.1| inner membrane protein OxaA [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303250854|ref|ZP_07337047.1| putative inner membrane protein translocase component YidC
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|303253770|ref|ZP_07339905.1| putative inner membrane protein translocase component YidC
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|307248474|ref|ZP_07530494.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|254772740|sp|B3H2D6|OXAA_ACTP7 RecName: Full=Inner membrane protein oxaA
 gi|189915909|gb|ACE62161.1| inner membrane protein OxaA [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302647354|gb|EFL77575.1| putative inner membrane protein translocase component YidC
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302650269|gb|EFL80432.1| putative inner membrane protein translocase component YidC
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306855042|gb|EFM87225.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 542

 Score =  339 bits (868), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 141/566 (24%), Positives = 256/566 (45%), Gaps = 34/566 (6%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M  N +  V   + +S +I   WQ  +     E    ++   Q        D   A+   
Sbjct: 1   MNSNRSLLVMGLLLVSFLIFTQWQQDFNP---EIQAQKQAQQQAQVASQSGDVPAASNAN 57

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
              A+  +    V L++  L  +I+  G      +L  ++ +++S +P   L + + T  
Sbjct: 58  TVIAENATQGKTVTLESDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATTYV 117

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
           A    +       N   P      +            + + F+    +  +  +     Y
Sbjct: 118 AQSGLVGKNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFVLKRGSY 177

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
              +   V N +   +   P G+I     +++ +         A    ++  ++      
Sbjct: 178 DVAVNFNVKNQTAATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDM 237

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
           + +  + +    W+ +   Y+ S ++P+++       +  +         +     TI P
Sbjct: 238 EKANLDINTKAGWVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGPVTTIAP 294

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
               T T+ L+ G K+   +     +      ++ +D+GW +FIAKP+F L+++  ++V 
Sbjct: 295 NSEATITSQLWTGPKDQKEMEATAAN-----LDLTVDYGWAWFIAKPLFALLTFIQSIVT 349

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G+AI+  T+ VK + +PL K QY S A M+ +QPKI E+RE+F     Q + + M++L
Sbjct: 350 NWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMSQEMMKL 408

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NP+ GC PIL+Q+P+F A+Y     ++E+RHAPF+GWI+DL+A DP        
Sbjct: 409 YKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------ 462

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537
                        I P++M  SMF+  KMSP P  D  Q  ++ +MPV+F      FP+G
Sbjct: 463 -------------ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSG 509

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563
           L++YW  SN+I+IVQQ +I +    +
Sbjct: 510 LVLYWLTSNIITIVQQWLIYRNLEKK 535


>gi|56415715|ref|YP_152790.1| inner membrane protein translocase component YidC [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|161616962|ref|YP_001590927.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Paratyphi B
           str. SPB7]
 gi|168234429|ref|ZP_02659487.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168464827|ref|ZP_02698719.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|194468665|ref|ZP_03074649.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197249737|ref|YP_002148779.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|197364643|ref|YP_002144280.1| inner membrane protein translocase component YidC [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|238913094|ref|ZP_04656931.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Tennessee
           str. CDC07-0191]
 gi|81678053|sp|Q5PKU2|OXAA_SALPA RecName: Full=Inner membrane protein oxaA
 gi|189036360|sp|A9MX83|OXAA_SALPB RecName: Full=Inner membrane protein oxaA
 gi|254773019|sp|B5EYX5|OXAA_SALA4 RecName: Full=Inner membrane protein oxaA
 gi|254778159|sp|B5BIL8|OXAA_SALPK RecName: Full=Inner membrane protein oxaA
 gi|56129972|gb|AAV79478.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161366326|gb|ABX70094.1| hypothetical protein SPAB_04783 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194455029|gb|EDX43868.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|195632342|gb|EDX50826.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197096120|emb|CAR61716.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197213440|gb|ACH50837.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|205331641|gb|EDZ18405.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 548

 Score =  339 bits (868), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 142/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|194446373|ref|YP_002043091.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|254778157|sp|B4SYB1|OXAA_SALNS RecName: Full=Inner membrane protein oxaA
 gi|194405036|gb|ACF65258.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
          Length = 548

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 142/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +  +            + + + +A    F +T    
Sbjct: 109 QAQSGLTGRGGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|58617041|ref|YP_196240.1| putative inner membrane protein translocase component YidC
           [Ehrlichia ruminantium str. Gardel]
 gi|58416653|emb|CAI27766.1| 60 kD inner-membrane protein [Ehrlichia ruminantium str. Gardel]
          Length = 575

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 210/585 (35%), Positives = 335/585 (57%), Gaps = 25/585 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N   A+ LSV+I+  W+  Y     E+    +  ++     + +      +    
Sbjct: 1   MLEIRNLVFAVVLSVLIMMGWRLVY-----EKFFTVQHVVEDEDSSSMIPEIDNVLTYRS 55

Query: 61  RAQALSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           R + +  +   RV+L N  + GSI+LKGAQ DDL  + YH+   ++S  + LLSP NT+ 
Sbjct: 56  RNEIIDSTQNLRVKLSNKEINGSISLKGAQLDDLVFKNYHITPDNSSDGIILLSPENTEG 115

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            YF E  ++   + I +PN  + W      +L+P   + L + N   ++F+  ++LD++Y
Sbjct: 116 VYFIEFGWIDPQHKIVVPNQLSTWT-SDKSVLSPNNTVTLTWNNQQGVIFQIKVTLDDYY 174

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
           +FKI   + NN+ + +   P GRI R +  T  + +   EG +   G  +L E  Y +I 
Sbjct: 175 MFKIEQIIINNTDNVVNLIPYGRINRARHTTEKSYWISHEGAVGSFGY-TLKEWTYKNII 233

Query: 239 KSSISNFHE----SNSWLGISDKYWASVFIPSKETSFHSQFKYLS----DGHARYQAKFS 290
           K       +     N W+GI+DKYW +  IP+          ++     +   R+Q  FS
Sbjct: 234 KERNIKISQQNTDDNQWVGIADKYWFTALIPNILQKKSKLSFHVKHGKYNNEDRFQVDFS 293

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
            +  +  P K+ ++T++LFAGAKE   +  Y+KDL I  F+  +D+G  YFI KP+F+L+
Sbjct: 294 HDSYSAYPNKTASSTSYLFAGAKELKLLDKYKKDLNISLFDKAVDFGILYFITKPVFLLL 353

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
            YFY+L+GNFG+AI+L T+ +KL+ FPL+ K YVS   +K +QP+I +++E +K    ++
Sbjct: 354 EYFYDLIGNFGLAILLLTIVIKLIMFPLSYKSYVSMFKLKYLQPEILKIKELYKNDNTKM 413

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
             K +  L+K ++++P++G  PIL+QIPVFFA+YKV+ +++EMRHAPF+ W+KDL+  D 
Sbjct: 414 -SKEVSLLFKKNDVSPMSGFIPILIQIPVFFALYKVLFVTIEMRHAPFYLWVKDLSNFDT 472

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-----ADKGQAMILNWMPV 525
            N+ TLFG+L F  P  + +GI P+I+ ++M IQ KM+         DK QA  + ++P 
Sbjct: 473 ANVLTLFGLLNFNPP--ICIGILPVILGITMIIQQKMNTSTHSSQDQDKIQASFIKFLPY 530

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
           VF+F  SSFP GLIIYW  SN I+I+QQ +I    G +  L   L
Sbjct: 531 VFIFIFSSFPTGLIIYWICSNSITIIQQLIIKAYIGRKFNLKHDL 575


>gi|261341634|ref|ZP_05969492.1| hypothetical protein ENTCAN_08100 [Enterobacter cancerogenus ATCC
           35316]
 gi|288315989|gb|EFC54927.1| membrane protein insertase, YidC/Oxa1 family [Enterobacter
           cancerogenus ATCC 35316]
          Length = 547

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 142/572 (24%), Positives = 255/572 (44%), Gaps = 54/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +           + KN Q  +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A     ++ +K   L  +IN +G   +   L  Y  ++ S  P   L   +  +  Y
Sbjct: 50  GVPASGQGKQITVKTDVLELTINTRGGDVEQALLLTYPKELKSTEPFQLL--ETTPEFIY 107

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               I + + +A    F +T +L 
Sbjct: 108 QAQSGLTGRDGPDNPANGARPLYNVDSDTFVLADGQNEIAIPMTYTDAAGNTFTKTFTLK 167

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 168 RGEYAVNVGYSVQNAGEKPLELSTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDT 227

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ ++P+ + + +  F   + G+     
Sbjct: 228 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWVPNNDGTNN--FYTANLGNGIAAI 285

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 286 GYKSQPVLVQPGQTGKLASTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 340

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 341 KLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIAAMRERLGDDK 400

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 401 -QRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 459

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 460 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 500

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 501 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 532


>gi|289209759|ref|YP_003461825.1| membrane protein insertase, YidC/Oxa1 family [Thioalkalivibrio sp.
           K90mix]
 gi|288945390|gb|ADC73089.1| membrane protein insertase, YidC/Oxa1 family [Thioalkalivibrio sp.
           K90mix]
          Length = 567

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 141/585 (24%), Positives = 239/585 (40%), Gaps = 56/585 (9%)

Query: 1   MERNWNYF---VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+         +A  L  ++  AW   Y  P   E   E++      +P  V ++     
Sbjct: 1   MDNLRPLLWLSLAFVL-FLMWQAWNQDYGTPAQPE-TAEQEAEDPDARPEDVPDAPQFED 58

Query: 58  IDDRAQALSMSP----------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
            DD   A  +S           +  ++       I+ +G      +L  Y  D+  + P+
Sbjct: 59  EDDPRAAADVSEISPIQEPDRRQFTVRTDKHELLIDTRGGTILRADLLQYPRDL-QDDPL 117

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELP-----NSNTVWNLISGKILTPTTPIKLVFKN 162
           V +    +    Y A+        N         + +  + +             L    
Sbjct: 118 VPVRLFDHRVRGYVAQSGLTHDRVNDRAMEGRAPSHHANFEVDGDHFEMAEGDDTLQVPM 177

Query: 163 ------ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216
                     + +        +L ++   V N            ++         + +  
Sbjct: 178 RWVSDDGEIEVIKTYTFTRGTHLIEVGYEVRNQGDSTWSGRQYRQLRHGPTPDRESWWLY 237

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
                A        E+   +              W+ +   Y+ S ++P  +       +
Sbjct: 238 TFTGAAYFDGSYQRER--FESLADDPIQQRLHGGWVAMIQHYFVSAWVPGDDEVNALYAR 295

Query: 277 YLSD--GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
            +    G        SA  +T+ PG+S      L+ G K    +    +       E+ +
Sbjct: 296 SVPGEVGEEYLIGLHSAEPLTVRPGESGQLQTRLWVGPKLQDELSQIAQ-----GLELTV 350

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           D+G F F+AKP+F L+   +++VGN+G +I+L T+ +KL FF L+   Y S A M+ + P
Sbjct: 351 DYGMFTFLAKPLFWLLDLIHSVVGNWGWSIVLLTILIKLAFFKLSATSYRSMARMRKVAP 410

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           K+  L+E++K    Q + +A+++LYK   INPL GC PIL+QIPVF A+Y V+  S+E+R
Sbjct: 411 KLQALKERYKDDK-QRMNQALMELYKKEKINPLGGCLPILVQIPVFIALYWVLLESVELR 469

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
            AP+W WI+DL++ DP                     I PI+M +SMF+Q K++PPP D 
Sbjct: 470 QAPWWLWIQDLSSRDPYF-------------------ILPILMGVSMFVQYKLNPPPMDP 510

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            Q  I   +P VF    + FPAGL++YW  +N+ SI QQ  I + 
Sbjct: 511 VQQKIFMALPFVFTIFFAFFPAGLVLYWFTNNLFSIAQQWYITRK 555


>gi|205354571|ref|YP_002228372.1| inner membrane protein translocase component YidC [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|207859068|ref|YP_002245719.1| inner membrane protein translocase component YidC [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|254773021|sp|B5QUQ4|OXAA_SALEP RecName: Full=Inner membrane protein oxaA
 gi|254773022|sp|B5RFY3|OXAA_SALG2 RecName: Full=Inner membrane protein oxaA
 gi|205274352|emb|CAR39377.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206710871|emb|CAR35235.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326629707|gb|EGE36050.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 548

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 142/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|152972613|ref|YP_001337759.1| putative inner membrane protein translocase component YidC
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238897216|ref|YP_002921964.1| putative inner membrane protein translocase component YidC
           [Klebsiella pneumoniae NTUH-K2044]
 gi|330005210|ref|ZP_08305169.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Klebsiella sp. MS 92-3]
 gi|166975872|sp|A6TG08|OXAA_KLEP7 RecName: Full=Inner membrane protein oxaA
 gi|150957462|gb|ABR79492.1| inner membrane protein translocase component YidC [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238549546|dbj|BAH65897.1| inner membrane protein translocase component [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|328536342|gb|EGF62704.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Klebsiella sp. MS 92-3]
          Length = 548

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 144/573 (25%), Positives = 250/573 (43%), Gaps = 55/573 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +           + KN Q  +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN  G   +   L  Y   + S  P   L   +  +  Y
Sbjct: 50  GVPASGQGKLITVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLL--ETTPQFVY 107

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +  +            I L + +    +F +T +L 
Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYNVDKEAFVLADGQDELVIPLTYTDKAGNVFTKTFTLK 167

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT--------NTFGVQEGFIAVLGD 226
              Y   +  +V N S   +  S  G++ +      +        +T     G      D
Sbjct: 168 RGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTAD 227

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
               + K+  I  +   N    N W+ +  +Y+ + ++P    + +  F   + G+    
Sbjct: 228 SKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPRNNGTNN--FYTANLGNGVVA 285

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
             + +  + + PG++    + L+ G      +         P  ++ +D+GW +FI++P+
Sbjct: 286 IGYKSQPVLVQPGQTDKLQSTLWVGPAIQDKMAAVA-----PHLDLTVDYGWLWFISQPL 340

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+    
Sbjct: 341 FKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++S S+E+RHAPF  WI DL+
Sbjct: 401 K-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLS 459

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
           A DP                     I PIIM  +MF   KMSP    D  Q  I+ +MPV
Sbjct: 460 AQDPYY-------------------ILPIIMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 500

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 501 IFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR 533


>gi|16767127|ref|NP_462742.1| inner membrane protein translocase component YidC [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|167548869|ref|ZP_02342628.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168260373|ref|ZP_02682346.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|197265232|ref|ZP_03165306.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|200387745|ref|ZP_03214357.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|38503121|sp|Q8ZKY4|OXAA_SALTY RecName: Full=Inner membrane protein oxaA
 gi|16422416|gb|AAL22701.1| putative preprotein translocase subunit YidC [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|197243487|gb|EDY26107.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|199604843|gb|EDZ03388.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205325671|gb|EDZ13510.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205350262|gb|EDZ36893.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|261248983|emb|CBG26840.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267996129|gb|ACY91014.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 14028S]
 gi|301160375|emb|CBW19900.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914971|dbj|BAJ38945.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|321225560|gb|EFX50615.1| Inner membrane protein translocase component YidC, long form
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|323132203|gb|ADX19633.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 548

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 142/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +  +            + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|46143583|ref|ZP_00134946.2| COG0706: Preprotein translocase subunit YidC [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 542

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 140/566 (24%), Positives = 260/566 (45%), Gaps = 34/566 (6%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M  N +  V   + +S +I   WQ  +      +   +++     +  + +  S A  +I
Sbjct: 1   MNSNRSLLVMGLLLVSFLIFTQWQQDFNPEIQAQKQAQQQAQVASQSGDVLAASNANTVI 60

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
              A+  +    V L++  L  +I+  G      +L  ++ +++S +P   L + + T  
Sbjct: 61  ---AENATQGKTVTLESDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATTYV 117

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
           A    +       N   P      +            + + F+    +  +  +     Y
Sbjct: 118 AQSGLVGKNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFVLKRGSY 177

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
              +   V N +   +   P G+I     +++ +         A    ++  ++      
Sbjct: 178 DVAVNFNVKNQTAATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDM 237

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
           + +  + +    W+ +   Y+ S ++P+++       +  +         +     TI P
Sbjct: 238 EKANLDINTKAGWVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGPVTTIAP 294

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
               T T+ L+ G K+   +     +      ++ +D+GW +FIAKP+F L+++  ++V 
Sbjct: 295 NSEATITSQLWTGPKDQKEMEATAAN-----LDLTVDYGWAWFIAKPLFALLTFIQSIVT 349

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G+AI+  T+ VK + +PL K QY S A M+ +QPKI E+RE+F     Q + + M++L
Sbjct: 350 NWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMSQEMMKL 408

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NP+ GC PIL+Q+P+F A+Y     ++E+RHAPF+GWI+DL+A DP        
Sbjct: 409 YKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------ 462

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537
                        I P++M  SMF+  KMSP P  D  Q  ++ +MPV+F      FP+G
Sbjct: 463 -------------ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSG 509

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563
           L++YW  SN+I+IVQQ +I +    +
Sbjct: 510 LVLYWLTSNIITIVQQWLIYRNLEKK 535


>gi|168242063|ref|ZP_02666995.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194448004|ref|YP_002047874.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|254773052|sp|B4TAV2|OXAA_SALHS RecName: Full=Inner membrane protein oxaA
 gi|194406308|gb|ACF66527.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|205338842|gb|EDZ25606.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
          Length = 548

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 142/577 (24%), Positives = 252/577 (43%), Gaps = 53/577 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +  +            + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           F      FP+GL++Y+  SN+++I+QQ +I +     
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRSLEKR 538


>gi|198243281|ref|YP_002217791.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|254773020|sp|B5FN13|OXAA_SALDC RecName: Full=Inner membrane protein oxaA
 gi|197937797|gb|ACH75130.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
          Length = 548

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 142/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +  +            + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|161505628|ref|YP_001572740.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189036359|sp|A9MJT7|OXAA_SALAR RecName: Full=Inner membrane protein oxaA
 gi|160866975|gb|ABX23598.1| hypothetical protein SARI_03804 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 548

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 141/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ S+ P   L   +  +  Y
Sbjct: 51  GVPASGQGKLITVKTDVLDLTINTRGGDVEQALLPAYPKELGSSEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEISTFGQLKQSINLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|254515874|ref|ZP_05127934.1| 60 kDa inner membrane insertion protein [gamma proteobacterium
           NOR5-3]
 gi|219675596|gb|EED31962.1| 60 kDa inner membrane insertion protein [gamma proteobacterium
           NOR5-3]
          Length = 586

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 148/606 (24%), Positives = 264/606 (43%), Gaps = 77/606 (12%)

Query: 1   MERNWNYFVA--IALSVIIVYAWQNF-------------------YVYPRIEEMNNERKN 39
           M+      +   + LS +++  W NF                   +        +   + 
Sbjct: 1   MDIQRTLLIGAIMLLSFMLLTEWVNFKTVKDEVVVTETRLTASPDFQADSSNADSATTQA 60

Query: 40  IQTVKQPNQVDN--------------------SYAAVLIDDRAQALSMSPRVELKNPSLI 79
           +     P  + +                    S +       A   S    V++   SL 
Sbjct: 61  VGNSDLPADLPDDTLSNTSISTAADIDDIPAVSASVDAGTSAAAVTSTGNIVQVYTDSLQ 120

Query: 80  GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNS 138
            +I+L G    ++ L  +  ++        LL  +N++  Y A+   +     + +   +
Sbjct: 121 VAIDLNGGDIVEVALAKFLAEIDDPETPFVLL-ENNSRRVYVAQSGLIGRDGIDSKSRAT 179

Query: 139 NTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFS 197
                         +  + L++ N   +   +  +   + Y+  +   + N S +Q + +
Sbjct: 180 YRTAQTRYDLGSADSLQVDLLWSNDEGVKVTKRFNFQRDSYVVDVEFIIDNQSGEQWQGN 239

Query: 198 PRGRIMRHKPQTATN-----TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWL 252
             G+I R      TN           G      D    +  + D  +        S  W+
Sbjct: 240 LFGQIKRDSSAAVTNGGGGMGMQPFLGAATTTADDRFKKFSF-DNMRKEPFREQHSGGWI 298

Query: 253 GISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312
            +   Y+ S +IP+ E +     +  + G     A F++  I + PG +   +   +AG 
Sbjct: 299 AMIQHYFLSAWIPAPEQTHTYSTRVTNSGFN--IAGFTSPAINVDPGSTREVSARFYAGP 356

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
           K+  ++         P  E+ +D+GW +++A+P+F L++  Y+LVGN+G AI+L TV +K
Sbjct: 357 KDQYSLQEIS-----PYLELSVDYGWLWWVAQPLFWLLTKIYSLVGNWGAAIILLTVLIK 411

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432
            +FF L+   Y S ANM+ +QPK+ ++RE++     Q   +AM++LY+   INP+ GC P
Sbjct: 412 AVFFKLSATSYKSMANMRRVQPKMADIREQYADDK-QKQSQAMMELYRKEKINPMGGCLP 470

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+Q+PVF A+Y ++  S+E+R APF  WI DL+  DP                     +
Sbjct: 471 ILVQMPVFIALYWMLMESVELRQAPFMLWINDLSVMDPYF-------------------V 511

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            P++M  SMF   K++PPP D  QA I+ W+PV+F F    FPAGL++YW  +N++S+ Q
Sbjct: 512 LPLMMGASMFFMQKLNPPPPDPMQAKIMQWLPVIFTFFFLWFPAGLVLYWVVNNLLSMAQ 571

Query: 553 QAVIMK 558
           Q VI +
Sbjct: 572 QYVITR 577


>gi|89092261|ref|ZP_01165215.1| inner membrane protein, 60 kDa [Oceanospirillum sp. MED92]
 gi|89083349|gb|EAR62567.1| inner membrane protein, 60 kDa [Oceanospirillum sp. MED92]
          Length = 545

 Score =  338 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 136/572 (23%), Positives = 240/572 (41%), Gaps = 46/572 (8%)

Query: 1   MERNWNYFVAIA--LSVIIVYAWQNFYVYPRIEEMNNER----KNIQTVKQPNQVDNSYA 54
           M+      +     +S ++V  W   Y      +                   + +++  
Sbjct: 1   MDVQRIILIGALCLISYMLVLQWNQDYGQQPEAQQATTSVSAYDTQPVATDLPKAEDTAQ 60

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
              +   A+    +  + +K   L   I+ KG       L  Y   + S  P V L    
Sbjct: 61  TGDVPGTAEQAQQAQLITVKTDVLDIIIDTKGGDIIQAALPQYKAALGSELPFVLL--KQ 118

Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI---LTPTTPIKLVFKNANNILFERT 171
           NT   Y ++   V        P     + +   +       T  + L F +   +   + 
Sbjct: 119 NTNRTYVSQSGLVGKNGPDASPEGRPTYAVTKNEYLLGDQDTLAVDLTFTDKQGVQITKR 178

Query: 172 ISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGD 226
            +     Y   +   V N S  Q   +  G+I R +                G +    +
Sbjct: 179 YTFTKGSYEINLEFIVNNQSEQQWAGNLFGQIKRDRSDDPTQSTDMGMQSYLGGVFSTAE 238

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
               +  + D++          + ++ +S  Y+ S +IP+    +  Q + L+     Y 
Sbjct: 239 DPYEKIDFDDMDDGQFKK-SSPDGYVAMSQHYFLSAWIPAPGAEYSYQSRKLNGN---YI 294

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
             F + +  +  G+    +   + G K+   +   +++       + +D+GW ++IA P+
Sbjct: 295 VGFLSPDFLVNAGEDKKVSATFYVGPKDQEIMELAQEN-----LPLTVDYGWLWWIASPL 349

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           +ML+ + Y LVGN+G+AI+  T+ VK   F L  K + S A M+   P++  L+E +   
Sbjct: 350 YMLLKWIYGLVGNWGLAIIGITIVVKAALFHLNAKAFKSMAKMRKFGPEMTRLKELYGD- 408

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q + + M++LY+   INPL GC PIL Q+P+F A+Y V+  S+++RHA  + ++ DL+
Sbjct: 409 DRQKMSQEMMKLYQKEKINPLGGCLPILAQMPIFIALYWVLMESVDLRHA-EFLYLADLS 467

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
             DP                     I PIIM +SMFIQ  ++P P D  QA I+  +P++
Sbjct: 468 VKDPYF-------------------ILPIIMGVSMFIQQMLNPTPPDPMQAKIMKMLPIM 508

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F F    FPAGL +YW  +N++SI QQ VI K
Sbjct: 509 FTFFFLWFPAGLTLYWVVNNILSIAQQYVINK 540


>gi|262040469|ref|ZP_06013712.1| YidC/Oxa1 family membrane protein insertase [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259042222|gb|EEW43250.1| YidC/Oxa1 family membrane protein insertase [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 548

 Score =  338 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 144/573 (25%), Positives = 250/573 (43%), Gaps = 55/573 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +           + KN Q  +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN  G   +   L  Y   + S  P   L   +  +  Y
Sbjct: 50  GVPASGQGKLITVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLL--ETTPQFVY 107

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +  +            I L + +    +F +T +L 
Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYNVDKEAFVLADGQDELVIPLTYTDKAGNVFTKTFTLK 167

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT--------NTFGVQEGFIAVLGD 226
              Y   +  +V N S   +  S  G++ +      +        +T     G      D
Sbjct: 168 RGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTAD 227

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
               + K+  I  +   N    N W+ +  +Y+ + ++P    + +  F   + G+    
Sbjct: 228 SKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPRNNGTNN--FYTANLGNGVVA 285

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
             + +  + + PG++    + L+ G      +         P  ++ +D+GW +FI++P+
Sbjct: 286 IGYKSQPVLVQPGQTDKLQSTLWVGPAIQDKMAAVA-----PHLDLTVDYGWLWFISQPL 340

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+    
Sbjct: 341 FKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++S S+E+RHAPF  WI DL+
Sbjct: 401 K-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLS 459

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
           A DP                     I PIIM  +MF   KMSP    D  Q  I+ +MPV
Sbjct: 460 AQDPYY-------------------ILPIIMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 500

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 501 IFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR 533


>gi|224585641|ref|YP_002639440.1| inner membrane protein translocase component YidC [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|254778158|sp|C0Q2L3|OXAA_SALPC RecName: Full=Inner membrane protein oxaA
 gi|224470169|gb|ACN47999.1| inner membrane protein translocase component YidC [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
          Length = 548

 Score =  338 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 142/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTSAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|84394512|ref|ZP_00993222.1| putative inner membrane protein translocase component YidC [Vibrio
           splendidus 12B01]
 gi|84374865|gb|EAP91802.1| putative inner membrane protein translocase component YidC [Vibrio
           splendidus 12B01]
          Length = 540

 Score =  338 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 137/570 (24%), Positives = 242/570 (42%), Gaps = 42/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         E+    +        +         
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWNVAQNPAPQAIEQAQSGSTLPAPSYADDLDPAPG-- 57

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
             Q ++ +  + +    L  SI+  G      NL  Y  +  S    V L   +   + +
Sbjct: 58  --QQVASAKTITVTTDVLTLSIDTVGGDVVQANLNDYSAEFDSEDTFVLL--KNEPGHQF 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V          +   + + +             I + ++       +  +    
Sbjct: 114 IAQSGLVGPQGIDLSSTNRPSYTVSADSFTLADGQDELRIPMTYQANGLDYTKTFVLKRG 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   V NNS     F     + ++      + T     G      D    +  + 
Sbjct: 174 SYAMDVEYDVVNNSGTNATFGMYAHLRQNVMDDGGSLTMPTYRGGAYSTEDTRYKKYSFD 233

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S    +   W  +   Y+AS +IP  E   +   + + +              
Sbjct: 234 DMQDRNLSLNLANGQGWAAMIQHYFASAWIPRDEAGSNLYTRVIGNLGD---IGVRMPNK 290

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G   +    L+ G K    +         P  ++++D+GW +FIAKP+  L+S+  
Sbjct: 291 TIATGDEASFKATLWVGPKLQDQMAAVA-----PNLDLVVDYGWLWFIAKPLHTLLSFIQ 345

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
            +V N+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 346 GIVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGD-DRQRMSQE 404

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PI+LQ+P+F ++Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 405 MMELYKKEKVNPLGGCLPIILQMPIFISLYWALMESVELRHSPFFGWITDLSAQDPYY-- 462

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I +    +
Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYRALEKK 535


>gi|165976859|ref|YP_001652452.1| putative inner membrane protein translocase component YidC
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|254772741|sp|B0BR23|OXAA_ACTPJ RecName: Full=Inner membrane protein oxaA
 gi|165876960|gb|ABY70008.1| 60 kD inner-membrane protein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 542

 Score =  338 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 141/566 (24%), Positives = 256/566 (45%), Gaps = 34/566 (6%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M  N +  V   + +S +I   WQ  +     E    ++   Q        D   A+   
Sbjct: 1   MNSNRSLLVMGLLLVSFLIFTQWQQDFNP---EIQAQKQAQQQAQVASQSGDVPAASNAN 57

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
              A+  +    V L++  L  +I+  G      +L  ++ +++S +P   L + + T  
Sbjct: 58  TVIAENATQGKTVTLESDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATTYV 117

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
           A    +       N   P      +            + + F+    +  +  +     Y
Sbjct: 118 AQSGLVGKNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFVLKRGSY 177

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
              +   V N +   +   P G+I     +++ +         A    ++  ++      
Sbjct: 178 DVAVNFNVKNQTAATVEVQPYGQIKYTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDM 237

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
           + +  + +    W+ +   Y+ S ++P+++       +  +         +     TI P
Sbjct: 238 EKANLDINTKAGWVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGPVTTIAP 294

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
               T T+ L+ G K+   +     +      ++ +D+GW +FIAKP+F L+++  ++V 
Sbjct: 295 NSEATITSQLWTGPKDQKEMEATAAN-----LDLTVDYGWAWFIAKPLFALLTFIQSIVT 349

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G+AI+  T+ VK + +PL K QY S A M+ +QPKI E+RE+F     Q + + M++L
Sbjct: 350 NWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMSQEMMKL 408

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NP+ GC PIL+Q+P+F A+Y     ++E+RHAPF+GWI+DL+A DP        
Sbjct: 409 YKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------ 462

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537
                        I P++M  SMF+  KMSP P  D  Q  ++ +MPV+F      FP+G
Sbjct: 463 -------------ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSG 509

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563
           L++YW  SN+I+IVQQ +I +    +
Sbjct: 510 LVLYWLTSNIITIVQQWLIYRNLEKK 535


>gi|254483195|ref|ZP_05096428.1| 60Kd inner membrane protein [marine gamma proteobacterium HTCC2148]
 gi|214036566|gb|EEB77240.1| 60Kd inner membrane protein [marine gamma proteobacterium HTCC2148]
          Length = 565

 Score =  338 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 152/586 (25%), Positives = 261/586 (44%), Gaps = 57/586 (9%)

Query: 1   MERNWNYFVAI--ALSVIIVYAWQNFYVYPR-IEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+   +  +     LS +++  W  F      IE     R    T     ++       L
Sbjct: 1   MDLQRSLLIGAIAVLSFMLLTEWVAFKDDKAAIETAQATRLIANTDSNTAELPQVSEPTL 60

Query: 58  IDDRAQALSMSPRVE-----------------LKNPSLIGSINLKGAQFDDLNLRGYHLD 100
                   S    +E                 ++  SL  +I+L G    +L L  Y  +
Sbjct: 61  FATDDDVPSTPELIEAEAPPQITQKNSGRIILVRTDSLQLAIDLNGGDIIELALPRYLEE 120

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
           + +      LL  +++   Y A+   + +        +    +  + ++      + +  
Sbjct: 121 IDNPDIPFVLLEQNDS-RTYIAQSGLIGSNGIDSKGRALFTASADNFELSESDDTLVVDL 179

Query: 161 K---NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ-----TATN 212
                 N  + +R       YL +I   V NNS  + + +  G+I R          +  
Sbjct: 180 NLTTADNIKVTKRFTFTRGEYLVEIDYIVVNNSNARWQANLFGQIKRDSTPAPSASQSGM 239

Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
                 G      D    +  + D+             W+ +   Y+ S +IP+ + S +
Sbjct: 240 GMQPFLGAAITQPDVRFTKFTFEDMLDDPFKA-QLPGGWIAMFQHYFLSAWIPNSDQSHN 298

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
              +    G     A F++  +T+ PG+S TT    +AG K+   +         P  ++
Sbjct: 299 YSTRVTQAGFN--IAGFTSPALTLDPGQSGTTGAQFYAGPKDQYRLAEIS-----PYLDL 351

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           ++D+GW ++IAKP+F L++  ++ VGN+G AI+L TV VK  FF L+   Y S A M+ +
Sbjct: 352 VVDYGWLWWIAKPLFWLLTNIHSFVGNWGTAIILLTVVVKAAFFKLSATSYRSMARMRKV 411

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QP++ ++RE++     Q   +AM++LY+   +NP+ GC PIL+Q+PVF A+Y V+  S+E
Sbjct: 412 QPQMLDIREQYADDK-QKQSQAMMELYRKEKVNPMGGCLPILVQMPVFIALYWVLMESVE 470

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           +RHAPF  WIKD++  DP                     + PI+M  SM+   +++PPP 
Sbjct: 471 LRHAPFALWIKDMSVMDPYF-------------------VLPILMGASMWFMQRLNPPPT 511

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           D  QA I+ W+P+VF F    FPAGL++YW  +N++S+ QQ VI K
Sbjct: 512 DPMQAKIMQWLPIVFTFFFLWFPAGLVLYWVVNNLLSMAQQYVITK 557


>gi|121606995|ref|YP_984324.1| 60 kDa inner membrane insertion protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120595964|gb|ABM39403.1| protein translocase subunit yidC [Polaromonas naphthalenivorans
           CJ2]
          Length = 569

 Score =  338 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 133/592 (22%), Positives = 242/592 (40%), Gaps = 55/592 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M       + +     +V  W  +         +     +                 V +
Sbjct: 1   MNDIRRTILWVIFGFSMVLLWDQWQVFNGHKATFFPSSTQTAKTTGSTAVPSTGSAAVPS 60

Query: 52  SYAAVLIDDRAQALSMSP---------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
             A+ +    A   + +P         ++ +    L  + + +G          Y     
Sbjct: 61  PSASAMPGSPAAVPAGAPLATPSVAKEQLTVNTDVLSLTFDSEGGTLVHTAFNKYKDMTH 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV--- 159
            +   V L    +T   Y A+   ++ +N    P   T+  ++ G+ L      +L    
Sbjct: 121 KDQGFVLL--DQSTNRVYVAQTGLIAGSNGGTFPTHKTLMTVVPGERLLKDGQNELQVKF 178

Query: 160 --FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFG 215
                    L +        Y   +   + N     +      +++R    P   ++ + 
Sbjct: 179 ESADMGGVKLLKTYTIKRGAYDLAVRHEIINTGTTPVAPQLYLQLVRDGNKPPGESSFYS 238

Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQ 274
              G       K   + ++ DIE + +      +N ++ +   Y+AS +I          
Sbjct: 239 TFTGPAIYTEAKKYQKVEFKDIENNKVDVEKQATNGYVAMVQHYFASAWILPDGLKRDLF 298

Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
            + +      Y          I PG + T  +  F G +E   +         P  E++ 
Sbjct: 299 LRKVD--TNLYAVGMITPLDPIAPGATKTVDSKFFVGPQEEKVLEALA-----PGLELVK 351

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           D+GW   +AKP++ L+   ++ + N+G +I+   + +K+ F+ L  K Y S A MK I P
Sbjct: 352 DYGWLTILAKPLYWLLDKLHSFIQNWGWSIVALVLLLKIAFYWLNAKAYASMAKMKAINP 411

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           KI E+RE+ K   PQ +Q+AM+++Y+   +NP+ GC+PI++QIPVF A+Y V+  S+EMR
Sbjct: 412 KITEMRERLKD-KPQEMQQAMMKIYREEKVNPMGGCFPIMIQIPVFIALYWVLLSSVEMR 470

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
            AP+  WI+DL++ DP                     I P++M+L+  +Q  ++P P D 
Sbjct: 471 GAPWILWIRDLSSPDPYF-------------------ILPVVMALTTMLQTALNPAPPDP 511

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
            QA ++ +MP++F      FPAGL++YW  +N++SI QQ VI    G     
Sbjct: 512 MQAKLMWFMPLIFSVMFFFFPAGLVLYWITNNILSITQQWVINTRMGVPPQF 563


>gi|319796643|ref|YP_004158283.1| membrane protein insertase, yidc/oxa1 family domain containing
           [Variovorax paradoxus EPS]
 gi|315599106|gb|ADU40172.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Variovorax paradoxus EPS]
          Length = 563

 Score =  338 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 151/587 (25%), Positives = 243/587 (41%), Gaps = 52/587 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYV-------------YPRIEEMNNERKNIQTVKQPN 47
           M       + +     +V  W  + V                +           +   P 
Sbjct: 1   MNDIRRTILWVIFGFSLVLLWDQWQVFNGNKPTFLPSSKPAAVATAPAGTTPASSNGVPT 60

Query: 48  QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
               S  A  +  +A A +   +V +       +I+ +G   + L L+ Y    +  +  
Sbjct: 61  ASGTSGNAGAVPTQAAAAAPREQVVVTTDLFKATIDSEGGTVNHLELQKYDE--ADRTKR 118

Query: 108 VTLLSPSNTKNAYFAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLV-----FK 161
           V L    +    Y A+   ++T       PN  T     +G          L        
Sbjct: 119 VVLFENGSPATRYVAQTGLLNTVDTGDRFPNHLTPMTPKAGPREMAAGQNTLEVSFESAP 178

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF--GVQEG 219
                  +  +     Y   +   V N S          +++RH    A   F      G
Sbjct: 179 VGGLKYTKTYVFHRGDYAIGVRHEVANVSDQPRDAQLYMQLLRHGTVAAGTMFGTNTFTG 238

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKE---TSFHSQF 275
             A   +K   +  + DI K  I      ++ W+ +   Y+AS ++   +        +F
Sbjct: 239 PAAYTNEKKFHKLDFKDIAKGKIEPPPPANDGWIAMVQHYFASAWLLKGDPASEQLRREF 298

Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
           +    G   +     A    I PG + T ++ LFAG +E   +         P  +++ D
Sbjct: 299 RVKDLGDNLFTVAMVATLPKIAPGTTQTVSSVLFAGPQEEKKLEALA-----PGLDLVKD 353

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           +G F  I+KP++ L+   +  +GN+G AI+   V +K  F+ L  K Y S A MK I PK
Sbjct: 354 YGIFAIISKPLYWLLIQLHGFLGNWGWAIVALVVLLKAAFYWLNAKAYASMAKMKAINPK 413

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           I E+RE+ K   PQ +Q+ M+++YKT  +NP+ GC+PI++QIPVF A+Y V+  S+EMRH
Sbjct: 414 IMEMRERLKD-KPQEMQQEMMRIYKTEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMRH 472

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           AP+ GWI DL+A DP                     I P++M+ +   Q  ++P P D  
Sbjct: 473 APWIGWITDLSAPDPWY-------------------ILPVVMTATSLFQTWLNPTPPDPM 513

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           QA ++  MP+ F      FPAGL++YW  +NV+SI QQ  I K  G 
Sbjct: 514 QAKLMWIMPLAFSVMFIFFPAGLVLYWITNNVLSIAQQWFINKRLGV 560


>gi|77166533|ref|YP_345058.1| 60 kDa inner membrane insertion protein [Nitrosococcus oceani ATCC
           19707]
 gi|254435359|ref|ZP_05048866.1| 60Kd inner membrane protein [Nitrosococcus oceani AFC27]
 gi|123593186|sp|Q3J6L8|OXAA_NITOC RecName: Full=Inner membrane protein oxaA
 gi|76884847|gb|ABA59528.1| protein translocase subunit yidC [Nitrosococcus oceani ATCC 19707]
 gi|207088470|gb|EDZ65742.1| 60Kd inner membrane protein [Nitrosococcus oceani AFC27]
          Length = 545

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 144/568 (25%), Positives = 256/568 (45%), Gaps = 40/568 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFY------VYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55
             N+   +  AL +++   W  +                       +   P  V ++   
Sbjct: 1   MENYRLILFSALVLVLFLMWDAWQTDYGPIPLLPPPPQPTASSGESSPVLPEAVPDAPPP 60

Query: 56  VLID-DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
            + D D A  L+    +E+K   L   I +      ++ L  Y + +   +  VTLL   
Sbjct: 61  EMADMDTAPILTGQKTIEVKTDLLAIKIGMASGDLYEVQLLNYPVSLKKPNEPVTLLHKR 120

Query: 115 NTKNAYFAELDYVSTAN---NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           +  + +  +    + +      E    +             +  + L +++ N I   +T
Sbjct: 121 D-PDLFVTQSGLRAASGPSITHETVQFSAPKTYYELIEDESSLKVPLTWEDENGIKVTKT 179

Query: 172 ISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230
                + Y   +   + N +          +  R  P++         G +    ++   
Sbjct: 180 YIFQRDSYQIDLNIKIENGTDQAWMGRAYAQFSRTPPESGGMFARSYVGAVFSTQEQEYQ 239

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
           +  + D+   S      S  W+ +   Y+ + ++P ++ + +   K++ +   RY A   
Sbjct: 240 KVDFGDLASQSFDR-RSSGGWVAMIQHYFVAAWVPREQGTNYYYGKHVQNS--RYIAGVM 296

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
             + TI PG+S      LF G K    +         P+  + +D+G    +A+P+F LM
Sbjct: 297 PPQQTIAPGESGQFNLALFTGPKIQDQLAAVA-----PKLNLTVDYGKLTILAEPLFWLM 351

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
           S+F+NLVGN+G AI+L T  VKL+FF L++  Y S A M+ +QP++  L+E++     Q 
Sbjct: 352 SWFHNLVGNWGWAIVLLTFVVKLVFFKLSQTSYRSMARMRKLQPRLLALKERYGD-DRQK 410

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           + +AM++LY+   +NP+ GC PI++QIPVF A+Y ++  S+E+R APF  WI+DL + DP
Sbjct: 411 VGQAMMELYRKEKVNPMGGCLPIVVQIPVFIALYWMLLESVELRQAPFIFWIQDLTSKDP 470

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I P++M +SMF+Q K+SP P D  QA ++  MPV+F   
Sbjct: 471 YY-------------------ILPLLMGVSMFVQQKLSPAPTDPIQAKVMALMPVMFTVF 511

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              FPAGL++YW  +N++SI QQ  I +
Sbjct: 512 FVMFPAGLVLYWVVNNILSIAQQWYITR 539


>gi|293393717|ref|ZP_06638025.1| YidC/Oxa1 family membrane protein insertase [Serratia odorifera DSM
           4582]
 gi|291423761|gb|EFE96982.1| YidC/Oxa1 family membrane protein insertase [Serratia odorifera DSM
           4582]
          Length = 544

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 136/569 (23%), Positives = 238/569 (41%), Gaps = 51/569 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      +      +        +    +        
Sbjct: 1   MDSQRNLLL-IALLFVSFMIWQAWQTDHAPQPAAQTTQQTTNAATGDAASQAVP------ 53

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +    L  +IN +G   +   L  Y   + S++P   L   +     Y
Sbjct: 54  ---ASGQGKLITVNTDVLSLTINTRGGDIEQAKLLAYPDTLGSSTPFQLL--ETTPSFVY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175
            A+             N        +    T         I L +        +  +   
Sbjct: 109 QAQSGLTGKNGPDNPANGERPLFQAAQDTFTLADGQDELRIPLTYTRDGVEYTKTFVLKR 168

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLV 230
            HY   +  +V N     +  S  G++ +         T +N F +     A        
Sbjct: 169 NHYAVGVDYSVNNKGTTPLELSLFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSTSETK 228

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
            +KY+  +K    N      W+ +  +Y+A+ ++P+  T   + F     G       F 
Sbjct: 229 YEKYA-FDKDENLNVSTQGGWVAMLQQYFATAWVPA--TQGTNTFYTAKPGDNLSTIGFK 285

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
           A  + + PG        L+ G +    +         P  ++ +D+GW +FI++P+F L+
Sbjct: 286 ATPVVVQPGAQQQLNATLWVGPELQDQMAQLA-----PHLDLTVDYGWLWFISQPLFKLL 340

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
            + +  +GN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q 
Sbjct: 341 KFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK-QR 399

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           + + M+ LYK   +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A DP
Sbjct: 400 MSQEMMALYKAEKVNPLGGCLPLIIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQDP 459

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529
                                I PI+M ++MF   KMSP    D  Q  I+ +MPV+F  
Sbjct: 460 YY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTV 500

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
               FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 501 FFLWFPSGLVLYYIVSNLVTILQQQLIYR 529


>gi|323496920|ref|ZP_08101948.1| membrane protein insertase [Vibrio sinaloensis DSM 21326]
 gi|323317994|gb|EGA70977.1| membrane protein insertase [Vibrio sinaloensis DSM 21326]
          Length = 539

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 139/570 (24%), Positives = 241/570 (42%), Gaps = 43/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         E+    +        +         
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPTPQPVEQAQSSSTLPAPSFADELDPAPAQQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                + +  + +   +L  SI+  G      +L  Y  ++ S    V L   +   + +
Sbjct: 60  -----ASAKTITVTTDALTLSIDTVGGDVVHADLNEYSAELDSADSFVLL--KNEPGHQF 112

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V          +   + + +             + + F        +  I    
Sbjct: 113 IAQSGLVGPQGIDLSSTNRPAYAVSADSFTLADGQDELRVPMTFSANGLEYTKTFILKRG 172

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   V NNS +   F     + ++      + T     G      +    +  + 
Sbjct: 173 SYAIDVEYNVVNNSGNNATFGMYAHLRQNLLDAGGSITMPTYRGGAYSTEETRYKKYSFE 232

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S        W  +   Y+AS +IP  E   +   + + +              
Sbjct: 233 DMQDRNLSINLPDGQGWAAMIQHYFASAWIPRNEPGTNLYTRVIGNLGD---IGVRMPNK 289

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G S   +  L+ G K    +         P  ++++D+GW +FIAKP+  L+S   
Sbjct: 290 TIASGDSAQMSATLWVGPKLQDQMAEVA-----PNLDLVVDYGWLWFIAKPLHSLLSLIQ 344

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
            LV N+GIAI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 345 GLVSNWGIAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 403

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC P++LQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 404 MMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 461

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 462 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 504

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 505 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 534


>gi|87122922|ref|ZP_01078787.1| inner membrane protein, 60 kDa [Marinomonas sp. MED121]
 gi|86161795|gb|EAQ63095.1| inner membrane protein, 60 kDa [Marinomonas sp. MED121]
          Length = 547

 Score =  337 bits (864), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 143/573 (24%), Positives = 244/573 (42%), Gaps = 45/573 (7%)

Query: 1   MERNWNYFVA--IALSVIIVYAWQNFY---VYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55
           M+    +       +  ++   W   Y       + +    ++       P+      A+
Sbjct: 1   MDFRRYFLWGALFVVGYMLFLQWNQDYGSVATSNVAQTTQTQEASNNTDLPSTAAAPVAS 60

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
             I   A+  +    + +   +LI SI+  G      +L  Y    +SN P V L   + 
Sbjct: 61  NDIVVDAKLPASDTLIRVVTDALIVSIDPVGGDIVKASLPEYKKAQASNEPFVLL--DNG 118

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERT 171
            +  Y  +   V         +   V+ +   +        +  + L F + + + + +T
Sbjct: 119 IERIYVTQSGLVGPNGPDASKDGRPVYRVEQSEFKLGDGEDSLAVNLYFTDVHGVQYTKT 178

Query: 172 ISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT----NTFGVQEGFIAVLGD 226
            +     +  +   TV NNS    + +   +I R   +  +           G      +
Sbjct: 179 FTFQRGEFAVRQQITVDNNSNAAWQGNLFAQIKRDNTEDPSASSGMGLQPYLGGAISTEE 238

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
               +  +SD+   S +    +  W+ +   Y+ S ++P          +          
Sbjct: 239 NPYTKVSFSDM-AESPTKITTTGGWIALLQHYFVSAWVPDSNQKATLYTR---QKGEFNI 294

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
             F+   + I  G   T ++ L+ G K    +         P  E+ +D+GW +++A+P+
Sbjct: 295 IGFTGPSVEIAAGTQGTLSSTLYIGPKLQDQLSVTA-----PNLELTVDYGWLWWLAQPL 349

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L++   + V N+G+AI+L  V VK LFF L+   Y S A M+   P++  LRE+    
Sbjct: 350 FWLLTAIQSFVINWGVAIILVVVVVKALFFKLSAASYRSMAKMRKFGPELTRLREQHGD- 408

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q +  AM++LYK   INPL GC PIL+Q+PVF A+Y V+  S+E+RHAPF  WI DL+
Sbjct: 409 DRQKMSAAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLMESVELRHAPFMLWINDLS 468

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
           A DP                     + PI+M +SM  Q  ++P P D  QA I+  MP+ 
Sbjct: 469 AMDPYF-------------------VLPILMGISMLGQQMLNPTPPDPMQARIMKIMPIA 509

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           F F    FP+GL++YW  +N +SI+QQ VI K 
Sbjct: 510 FTFFFLWFPSGLVLYWVVNNTLSILQQYVITKR 542


>gi|42520132|ref|NP_966047.1| putative inner membrane protein translocase component YidC
           [Wolbachia endosymbiont of Drosophila melanogaster]
 gi|42409869|gb|AAS13981.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 569

 Score =  337 bits (864), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 212/564 (37%), Positives = 333/564 (59%), Gaps = 20/564 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-RKNIQTVKQPNQVDNSYAAVLID 59
           M    +  +A  LS++I+ +W+  Y        N    +NI+ ++      N  A ++  
Sbjct: 1   MSEAKSLILAAILSMLIMVSWRIIYDNFFSTSQNQPLIENIEHIE----SFNDLAPIIYQ 56

Query: 60  DRAQALSM--SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
           +R++ ++     RV L N  + GSI+LKGA+FDDL L  YHL+ SS+SP V LLSP+ +K
Sbjct: 57  NRSEIINSTREQRVSLTNNMIKGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESK 116

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
           + YFAE  ++  +N I++P+S  VW             + L + N N ILF   I+LD++
Sbjct: 117 DVYFAEFGWLDPSNKIKVPDSKAVWRADKLN----QKEVNLSWDNENGILFRMKINLDDN 172

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y+FK+   V NN+ D +   P G+I R +     + +   EG +    +  L E  Y DI
Sbjct: 173 YMFKVEQVVENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFDN-KLEEWTYKDI 231

Query: 238 EKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEIT 295
            K  +     S  +W G +DKYW +  IP K    +   K+ + +   ++Q  F     +
Sbjct: 232 SKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNTDKFQVDFVKPYKS 291

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           ILPG S++  N+ FAGAK+   +  Y+  L IP F+  +D+G  YFI KP+F+L+ YF  
Sbjct: 292 ILPGASVSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNF 351

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           ++ NFG+AI+L T+ +KLL   L  + Y+S   +K++QP++  ++E +K    +   K  
Sbjct: 352 VLKNFGLAILLLTLVIKLLMLSLFNRSYISMFKVKSLQPELTRIKELYKNDSLK-QHKET 410

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           I L+K +N+NP++  +P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL+A DPTNIFT
Sbjct: 411 IALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFFLWIKDLSAPDPTNIFT 470

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFALS 532
           LFG+  +  P  + +GI PII   +M IQ K+S       D  Q  ++ ++P + VF  S
Sbjct: 471 LFGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFS 528

Query: 533 SFPAGLIIYWSWSNVISIVQQAVI 556
           SFPAGL+IYW +SN+I+++QQ++I
Sbjct: 529 SFPAGLVIYWIFSNIITLIQQSLI 552


>gi|197286946|ref|YP_002152818.1| inner membrane protein translocase component YidC [Proteus
           mirabilis HI4320]
 gi|227354814|ref|ZP_03839231.1| Oxa1 family cytochrome oxidase biogenesis protein [Proteus
           mirabilis ATCC 29906]
 gi|194684433|emb|CAR46145.1| inner membrane protein [Proteus mirabilis HI4320]
 gi|227165132|gb|EEI49963.1| Oxa1 family cytochrome oxidase biogenesis protein [Proteus
           mirabilis ATCC 29906]
          Length = 546

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 134/568 (23%), Positives = 254/568 (44%), Gaps = 45/568 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      +      +  Q    P+    +        
Sbjct: 1   MDSQRNL-LFIALLFVSFLIWQQWEGDKVSQNTTTTTQVSQQADMPSSDSLAVTG----- 54

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              +   +  + +K   L   IN +G   D+ +L  Y  +++S +P   L   +  +  Y
Sbjct: 55  --NSNEQAKLITVKTDVLDLRINTQGGTIDEADLLAYPAELNSKTPFRLL--ETTPQFLY 110

Query: 121 FAELDYVSTANNIELPNSNTVWNLIS---GKILTPTTPIKLVFKNANNILFERTISLDEH 177
            A+   +      +               G+                    +  I     
Sbjct: 111 QAQSGLIGPDGPDQKSRPVYSATQQEFILGENQDELRVPMTFVNEEGVKFVKTFILKKGQ 170

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQTATNTFGVQEGFIAVLGDKSLVE 231
           Y   I   V N +   +  +  G++ +      H+   ++N         A   D++  +
Sbjct: 171 YDIGIEYKVENPTDKTLTMNFYGQLKQSVKLPEHRDTGSSNFALHTYRGAAYSSDETNYK 230

Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
           +      +    +   +N W+ +  +Y+A+ +IP+K++  ++ +    D  +     + +
Sbjct: 231 KYSFGDIEDKNLSITTNNGWIAMLQQYFATAWIPAKDSQNNNFYSITLDNKSIALIGYKS 290

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
             IT+ P  +   T+ L+ G +    +         P  ++ +D+GW +FI++P+F L+ 
Sbjct: 291 APITVAPNSTQDITSTLWVGPEIQSEMSAIA-----PHLDLSVDYGWLWFISQPLFKLLK 345

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  LRE+      Q +
Sbjct: 346 FLHSFIGNWGFSIIMITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAALRERIGDDK-QRM 404

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
            + M+ LYK   +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI+DL+A DP 
Sbjct: 405 SQEMMALYKQEKVNPLGGCLPLIIQMPIFLALYYMLMGSVELRHAPFILWIQDLSAQDPY 464

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530
                               I P++M ++MFI  K+SP    D  Q  I+ +MPVVF   
Sbjct: 465 Y-------------------ILPLLMGVTMFIIQKLSPTAVTDPMQQKIMTFMPVVFTVF 505

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 506 FLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|167995355|ref|ZP_02576445.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205326982|gb|EDZ13746.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|332990692|gb|AEF09675.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. UK-1]
          Length = 548

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 142/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +  +            + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNEMQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|254796769|ref|YP_003081605.1| inner membrane protein, 60 kDa [Neorickettsia risticii str.
           Illinois]
 gi|254590012|gb|ACT69374.1| inner membrane protein, 60 kDa [Neorickettsia risticii str.
           Illinois]
          Length = 585

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 178/569 (31%), Positives = 301/569 (52%), Gaps = 22/569 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M++ +N F+A  LS +++  W   +  P   E  +E    ++VK    ++++ +      
Sbjct: 20  MQQTYNVFIATLLSFLVIIGWNLVFYNPAQRESLHEVPKRESVKVYESLESTLS------ 73

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                  + R+++ +  L GSI L G   DDL L+ Y            LL P+ TK AY
Sbjct: 74  -------TERIKISSSKLEGSIQLTGLALDDLILKDYKS--DDLKGQYRLLYPNKTKGAY 124

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
           F    +    +      S+        ++LTP  P+   + N + +LF+  +S+D++Y+F
Sbjct: 125 FINPGWTIPGDAGLRTPSSKTKWQADSELLTPGNPVTFSWDNRSGLLFKVVVSVDDNYMF 184

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK----SLVEQKYSD 236
                V N S + +       I +  P+T  +   + EG + V+ D+       +    +
Sbjct: 185 TFKQIVENKSQNDLSVGSHFTITKRLPETNKSMLIMHEGPVGVIKDQLIELKYSKIAKKN 244

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG-HARYQAKFSANEIT 295
              +   +    + W G SDKYW    I    +       ++ D     ++      +  
Sbjct: 245 KSIAFDEDAQNQHGWFGFSDKYWFVSQIFENSSDGKLYISHVDDKSDDIFRITNFNAQKI 304

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           +  G  IT    LFAG K+   +  Y +++ I  F+  +D+G  YFI KP+  L+  FY+
Sbjct: 305 VRGGGFITKETMLFAGPKKLSLLEEYAQNMRIYLFDRAVDFGVLYFITKPISKLLQVFYH 364

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           LVGNFG+AI+L T F+++L  PL+ K  +S   +K +QP+I +++  ++      L +A 
Sbjct: 365 LVGNFGVAIILLTFFIRVLMLPLSIKSGISMFKIKELQPEILKIKSIYQNDKD-ALNRAS 423

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++L++ H + P++GC P LLQ+PVFFA+YKVI I++EMR APF+ WI DL+  DPTN+FT
Sbjct: 424 VELFRKHRVTPMSGCLPTLLQVPVFFALYKVIFITIEMRQAPFFLWISDLSLPDPTNLFT 483

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534
           LFG++ +  P F+ +GI PII+ L+M IQ K+SP    D  QA ++  MP VF+   +SF
Sbjct: 484 LFGLINWNCPDFLSIGILPIILGLTMVIQQKLSPSHYEDGTQAFMIKAMPYVFMILFASF 543

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           P+GL++YW ++N++S+VQQ +I +    +
Sbjct: 544 PSGLVLYWVFNNILSLVQQFMIGRYLFTK 572


>gi|326319557|ref|YP_004237229.1| membrane protein insertase, YidC/Oxa1 family domain-containing
           [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323376393|gb|ADX48662.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 566

 Score =  337 bits (863), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 134/590 (22%), Positives = 237/590 (40%), Gaps = 54/590 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M       + +     +V  W  +         +    +               P  V  
Sbjct: 1   MNDIRRTILWVIFGFSMVLLWDKWQVHNGHKATFFPEPVPAQVASAPAGGGASAPGSVPT 60

Query: 52  SYAAVLIDDRA---------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
             AA     +             +   RV +    L  + + +G       L GY     
Sbjct: 61  PSAAPAAGAQQVPPGGTAAAAPAAPRERVTVTTDVLRLTFDSEGGTLTHGELLGYPDMAD 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
            + P   L    + +  Y A+   +          +       +  +      I + F++
Sbjct: 121 KSRPFTLL--DDSAQRVYVAQTGLIG-GAGYPTHKTPMAVVPGNRTLQDGQNDISIRFES 177

Query: 163 ---ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQ 217
                  L +        Y   +   V N     +      +++R    P   ++ +   
Sbjct: 178 PDLGGVKLVKTWTLKRGAYDIAVKHEVVNTGTTPVSPQLYMQLVRDGNKPPGESSFYSTF 237

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFK 276
            G       K   + ++ DIE         S N ++ +   Y+A+ ++ +         +
Sbjct: 238 TGPAVYTEAKKYHKVEFKDIESGKAEIDKSSTNGYVAMVQHYFATAWLLADGIQRDLFVR 297

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
            +      Y      +   I PG+S T    LFAG +    +         P  E++ D+
Sbjct: 298 KVD--TNLYSVGMITSVGEIAPGQSKTLDARLFAGPQIETMLEKLS-----PGLELVKDY 350

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           GW   +AKP++ L+   + ++ N+G +I+   + +K+ F+ L  K Y S A MK I PKI
Sbjct: 351 GWLTILAKPLYWLLEQLHKILNNWGWSIVGLVLLLKIAFYWLNAKAYASMAKMKAINPKI 410

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
            E+RE+ K   PQ +Q+ M+++Y+   +NP+ GC+PI++QIPVF A+Y V+  S+EMR+A
Sbjct: 411 MEMRERLKD-KPQQMQQEMMRIYREEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMRNA 469

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+ GWI DL++ DP                     I P++M+ S  +Q  ++P P D  Q
Sbjct: 470 PWIGWIHDLSSPDPYF-------------------ILPLLMTASSLLQTALNPAPPDPMQ 510

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           A ++ +MP++F      FPAGL++YW  +N++SI QQ +I K  G     
Sbjct: 511 AKMMWFMPLIFSVMFFFFPAGLVMYWLTNNILSIAQQWIINKRMGVPPQF 560


>gi|329297777|ref|ZP_08255113.1| membrane protein insertase [Plautia stali symbiont]
          Length = 548

 Score =  337 bits (863), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 137/574 (23%), Positives = 244/574 (42%), Gaps = 57/574 (9%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N F+   + +S +I  AWQ  +          +  +              A    
Sbjct: 1   MDSQRNLFLIAFLFVSFMIWQAWQTDHAPQPQHTQTTQNTSS------------AAGDAA 48

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                A      + +K   L  +IN +G   +   L  Y   + S++P   L   +    
Sbjct: 49  SSGVPASGQGKTITVKTDVLSLNINTRGGDIEQAQLLTYPDKLGSDAPFQLL--ETTPAF 106

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK-----LVFKNANNILFERTIS 173
            Y A+             N        S                L +   N +++ +T  
Sbjct: 107 VYQAQSGLTGRNGPDNPNNGARPLYTASLDHFEMADGQTELRVPLSWTGENGVVYTKTFV 166

Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIM-----RHKPQTATNTFGVQEGF--IAVLG 225
                +   +   + N S   +  +  G++           T +N F +           
Sbjct: 167 FKRGEFAVNVDYNINNASQQPLEVAMFGQLKLTIDLPKHRDTGSNNFALHTFRGAAYSTS 226

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           D    + K+  I  +   N   SN W+ +  +Y+A+ ++P   T  ++     + G+   
Sbjct: 227 DAKYEKYKFDTIADNENLNTTTSNGWVAMLQQYFATAWVPR--TQGNNTLYTSNLGNGVA 284

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
              + +  +TI  G        L+ G +    +         P  ++ +D+GW +FI++P
Sbjct: 285 AIGYKSAPVTIAAGAQQDLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQP 339

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+   
Sbjct: 340 LFKLLKFLHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q   + M+ LYK   +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF  WI DL
Sbjct: 400 DK-QKQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFVLWIHDL 458

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524
           +A DP                     I P+IM ++MF   +MSP    D  Q  I+ +MP
Sbjct: 459 SAQDPYY-------------------ILPVIMGITMFFIQRMSPTTVTDPMQQKIMTYMP 499

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           V+F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533


>gi|223041690|ref|ZP_03611886.1| inner membrane protein OxaA [Actinobacillus minor 202]
 gi|198246541|gb|ACH82230.1| inner membrane protein OxaA [Actinobacillus minor 202]
          Length = 554

 Score =  337 bits (863), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 142/559 (25%), Positives = 244/559 (43%), Gaps = 50/559 (8%)

Query: 21  WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIG 80
           WQ  +           +K  Q   Q    D   A     + A++ S    + +++  L  
Sbjct: 23  WQQDFNP-----EIQAQKQAQIQAQQQSGDVPAATSQTQNVAESNSKGKTITIESDVLRL 77

Query: 81  SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140
           +++  G    D +L  +H ++ SN+P   L    N+K  Y A+   +             
Sbjct: 78  TVDTLGGDVIDSDLLKHHAELHSNTPFELL--QDNSKVLYIAQSGLIGKNGIDTNNGRAQ 135

Query: 141 VWNLISGKILTPTT---PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFS 197
                    L        + L F+    +  +        Y   +   + NNS + +   
Sbjct: 136 YQTTADSFKLADGQNEISVPLTFEKDGVVYTKTFTLKRGSYNVGVDFNIKNNSAEAVEVQ 195

Query: 198 PRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN-----------F 245
           P G++     +++ + T     G      + +  +  + ++                   
Sbjct: 196 PYGQLKHTLVESSGSLTMPTYTGGAYSSSETNYKKYSFQEMADEKKRKAEQGIANGGLSI 255

Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305
             +  W+ I   Y+ S ++P ++       +   +G A     +     T+ P    T +
Sbjct: 256 ESNTGWVAILQHYFVSAWVPQQDKPMTIYTRVSDNGVA--TIGYRGALTTVAPNSDATIS 313

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
             L+ G K+   +            ++  D+GW +FIAKP+F L++    +V N+G+AI+
Sbjct: 314 THLWTGPKDQKEMAETAA-----HLDLTADYGWAWFIAKPLFWLLTNIQKVVINWGLAII 368

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
             T+ VK L +PL K QY S A M+ +QP+I E+RE+F     Q + + M++LYK   +N
Sbjct: 369 CVTIVVKTLLYPLTKAQYTSMAKMRMLQPRIQEMRERFGD-DRQRMSQEMMKLYKEEKVN 427

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           P+ GC PIL+Q+P+F A+Y     ++E+RHAPF+GWI+DL+A DP               
Sbjct: 428 PMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------------- 474

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
                 I P++M  SMF+  KMSP P AD  Q  ++ +MPV+F      FP+GL++YW  
Sbjct: 475 ------ILPLLMGGSMFLLQKMSPTPVADPVQQKVMTFMPVMFTVFFLWFPSGLVLYWLT 528

Query: 545 SNVISIVQQAVIMKMHGAE 563
           SN I+I QQ  I +    +
Sbjct: 529 SNCITIAQQWWIYRQLEKK 547


>gi|322716820|gb|EFZ08391.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 548

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 142/572 (24%), Positives = 250/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN  G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTHGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTSAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|91795120|ref|YP_564771.1| 60 kDa inner membrane insertion protein [Shewanella denitrificans
           OS217]
 gi|123356330|sp|Q12HM8|OXAA_SHEDO RecName: Full=Inner membrane protein oxaA
 gi|91717122|gb|ABE57048.1| protein translocase subunit yidC [Shewanella denitrificans OS217]
          Length = 541

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 133/564 (23%), Positives = 233/564 (41%), Gaps = 39/564 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +      +    + +    V      D   A   +  
Sbjct: 1   MESQRN-ILLIGLLFVSFLLWQQWQTDNAPQVAAPQTQVKSHVSAETSSDVPEADGSVST 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
               ++ +  + +    L+  IN  G       L  +  ++  N P + L    ++   Y
Sbjct: 60  --AVVASTNLINVTTDQLVIKINPLGGDIVYAALVKHKTEIDKNDPFILL--EQSSDFNY 115

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKI----LTPTTPIKLVFKNANNILFERTISL-D 175
            A+   +              +   S             + L       + + +  +   
Sbjct: 116 IAQSGLIGRDGIDSSTKGRAQFTTTSSDFSLADDQDKLTVPLTLVTDTGVRYTKVFTFTR 175

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             +   +   V N S   ++    G+I +    T  +         A        E+   
Sbjct: 176 GQFDVGVDYQVNNTSDKSLQLQMYGQIKQTIKPTEGSMMMPTYRGAAFSTSDVRYEKYDF 235

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           +       +      W  +   Y+ S +IP    +        + G A     F      
Sbjct: 236 EDMADMNLSKSTLGGWAAMLQHYFVSAWIPPATDANTIFSSVSAGGFAN--IGFRGAVYD 293

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           + PG   + +   + G K+   +    +        +++D+G+ +++A P++ L+  F +
Sbjct: 294 VAPGSEQSISAQFYVGPKDQKALSAISET-----LNLVVDYGFLWWLAIPIYKLLMIFQS 348

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           LV N+GIAI+L T+ V+ L +PL K QY S A M+N+QPK+ +++E+F     Q + +AM
Sbjct: 349 LVTNWGIAIILITLTVRGLLYPLTKAQYTSMAKMRNLQPKLADMKERFGD-DRQKMGQAM 407

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NP+ GC PILLQ+P+F A+Y V+  S E+RHAPF  WI DL+  DP     
Sbjct: 408 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESYELRHAPFMLWINDLSVQDPYY--- 464

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533
                           + P++M +SM++  KM P  P  D  Q  ++ WMPV+F      
Sbjct: 465 ----------------VLPLLMGVSMWLMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLW 508

Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557
           FPAGL++YW   N+++I QQ +I 
Sbjct: 509 FPAGLVLYWLVGNLVAITQQKIIY 532


>gi|54299007|ref|YP_125376.1| hypothetical protein lpp3074 [Legionella pneumophila str. Paris]
 gi|81679354|sp|Q5X0M2|OXAA_LEGPA RecName: Full=Inner membrane protein oxaA
 gi|53752792|emb|CAH14227.1| hypothetical protein lpp3074 [Legionella pneumophila str. Paris]
          Length = 556

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 134/579 (23%), Positives = 254/579 (43%), Gaps = 41/579 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-----PNQVDNSYAAV 56
                  + +AL++I +  W  + +    ++   E+   Q              N+   +
Sbjct: 1   MDIRRIVLYMALALIGLSLWNAWQIDYPAKQPVEEKTASQLTSDGHLLPQIIPSNAEQPI 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
            +    +A S    +++K   L   I+LK        L  Y L V   +    LL    +
Sbjct: 61  TLKAEEKASSSKQLIQVKTDVLDVDIDLKNGDIVKGLLLDYPLSVEDKNKPFPLLQNQAS 120

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFERTISL 174
           +        ++      +  + +        ++ +      + L  K+ + +  ++    
Sbjct: 121 QRYVANSSLFILDGQTPQSLDFDFTSEKEYYELKSDQNQLIVTLNGKSEDGLDVKKEFVF 180

Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA----VLGDKSL 229
               YL ++   + N      +     +++R  P+   ++      +        G    
Sbjct: 181 TKGSYLIEVNYKIANTGNSLWKGYFNTQLLRSSPKEDKSSIFHIGSYTGASFSNPGKNRY 240

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
            +  +SD+ KS++        W+ +   Y+ S ++P+ ++               Y    
Sbjct: 241 QKVSFSDMSKSNLD-VDAKGGWIAMQQHYFLSAWVPNADSENKFYTLATDKD---YTIGA 296

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            +  IT+ P +     + L+ G +    +         P  ++ +D+G  +F++  +F L
Sbjct: 297 VSQPITVKPKEDKIVGSKLYIGPEITSVLKGIS-----PSLDLTVDYGILWFLSSLLFSL 351

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           M   Y +VGN+G +I+L TV +KL F+ L+   Y S A+M+ +QPK+  LRE++     +
Sbjct: 352 MKAIYTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAK 411

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + +A ++LYK   +NPL GC PIL+QIPVF A+Y V+  S+E+R APF  WI DLA+AD
Sbjct: 412 -ISQATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASAD 470

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529
           P +                   + P+IM  +M IQ K++P PAD  QA ++ ++P++F  
Sbjct: 471 PYH-------------------VLPLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTG 511

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
              +FP+GL++YW  +N +SI+QQ  I + +  E     
Sbjct: 512 LFWNFPSGLVLYWIVNNTLSILQQWYITRKYSDEKPAKK 550


>gi|288932889|ref|YP_003436948.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Klebsiella variicola At-22]
 gi|288887618|gb|ADC55936.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Klebsiella variicola At-22]
          Length = 548

 Score =  336 bits (862), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 144/573 (25%), Positives = 250/573 (43%), Gaps = 55/573 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +           + KN Q  +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN  G   +   L  Y   + S  P   L   +  +  Y
Sbjct: 50  GVPASGQGKLITVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLL--ETTPQFVY 107

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +  +            I L + +    +F +T +L 
Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYNVDKEAFVLADGQDEIVIPLTYTDKAGNVFTKTFTLK 167

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT--------NTFGVQEGFIAVLGD 226
              Y   +  +V N S   +  S  G++ +      +        +T     G      D
Sbjct: 168 RGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTSD 227

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
               + K+  I  +   N    N W+ +  +Y+ + ++P    + +  F   + G+    
Sbjct: 228 TKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPQNNGTNN--FYTANLGNGIVA 285

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
             + +  + + PG++    + L+ G      +         P  ++ +D+GW +FI++P+
Sbjct: 286 IGYKSQPVLVQPGQTDKLQSVLWVGPAIQDKMAAVA-----PHLDLTVDYGWLWFISQPL 340

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+    
Sbjct: 341 FKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++S S+E+RHAPF  WI DL+
Sbjct: 401 K-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLS 459

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
           A DP                     I PIIM  +MF   KMSP    D  Q  I+ +MPV
Sbjct: 460 AQDPYY-------------------ILPIIMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 500

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 501 IFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR 533


>gi|290511687|ref|ZP_06551055.1| preprotein translocase YidC subunit [Klebsiella sp. 1_1_55]
 gi|289775477|gb|EFD83477.1| preprotein translocase YidC subunit [Klebsiella sp. 1_1_55]
          Length = 548

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 144/573 (25%), Positives = 250/573 (43%), Gaps = 55/573 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +           + KN Q  +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN  G   +   L  Y   + S  P   L   +  +  Y
Sbjct: 50  GVPASGQGKLITVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLL--ETTPQFVY 107

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +  +            I L + +    +F +T +L 
Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYSVDKEAFVLADGQDEIVIPLTYTDKAGNVFTKTFTLK 167

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT--------NTFGVQEGFIAVLGD 226
              Y   +  +V N S   +  S  G++ +      +        +T     G      D
Sbjct: 168 RGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTSD 227

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
               + K+  I  +   N    N W+ +  +Y+ + ++P    + +  F   + G+    
Sbjct: 228 TKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPQNNGTNN--FYTANLGNGIVA 285

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
             + +  + + PG++    + L+ G      +         P  ++ +D+GW +FI++P+
Sbjct: 286 IGYKSQPVLVQPGQTDKLQSVLWVGPAIQDKMAAVA-----PHLDLTVDYGWLWFISQPL 340

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+    
Sbjct: 341 FKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++S S+E+RHAPF  WI DL+
Sbjct: 401 K-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLS 459

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
           A DP                     I PIIM  +MF   KMSP    D  Q  I+ +MPV
Sbjct: 460 AQDPYY-------------------ILPIIMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 500

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 501 IFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR 533


>gi|52843195|ref|YP_096994.1| inner membrane protein, 60 kDa [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|81680366|sp|Q5ZR81|OXAA_LEGPH RecName: Full=Inner membrane protein oxaA
 gi|52630306|gb|AAU29047.1| inner membrane protein, 60 kDa [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 556

 Score =  336 bits (861), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 136/579 (23%), Positives = 253/579 (43%), Gaps = 41/579 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-----PNQVDNSYAAV 56
                  + +AL++I +  W  + +    ++   E+   Q              N+   V
Sbjct: 1   MDIRRIVLYMALALIGLSLWNAWQIDYPAKQPVEEKTASQLTSDGHLLPQIIPSNAEQPV 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
            +    +A S    +++K   L   I+LK        L  Y L V   +    LL    +
Sbjct: 61  TLKAEEKASSGKQLIQVKTDVLDVDIDLKNGDIVKGLLLDYPLSVEDKNKPFPLLQNQAS 120

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFERTISL 174
           +        +V      +  + +        ++        + L  K+ + +  ++    
Sbjct: 121 QRYVANSSLFVLDGQTPQSLDFDFTSEKEYYELKPDQNQLIVTLNGKSEDGLDVKKEFVF 180

Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA----VLGDKSL 229
               YL ++   + N      +     +++R  P+   ++      +        G    
Sbjct: 181 TKGSYLIEVNYKIANTGNSLWKGYFNTQLLRSSPKEDKSSIFHIGSYTGASFSNPGKNRY 240

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
            +  +SD+ KS++        W+ +   Y+ S ++P+ ++               Y    
Sbjct: 241 QKVSFSDMSKSNLD-VDAKGGWIAMQQHYFLSAWVPNADSENKFYTLATDKD---YTIGA 296

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            +  IT+ P +     + L+ G +    +         P  ++ +D+G  +F++  +F L
Sbjct: 297 VSQPITVKPKEDKIVGSKLYIGPEITSVLKGIS-----PSLDLTVDYGILWFLSSLLFSL 351

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           M   Y +VGN+G +I+L TV +KL F+ L+   Y S A+M+ +QPK+  LRE++     +
Sbjct: 352 MKAIYTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAK 411

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + +A ++LYK   +NPL GC PIL+QIPVF A+Y V+  S+E+R APF  WI DLA+AD
Sbjct: 412 -ISQATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASAD 470

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529
           P +                   + P+IM  +M IQ K++P PAD  QA ++ ++P++F  
Sbjct: 471 PYH-------------------VLPLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTG 511

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
              +FP+GL++YW  +N +SI+QQ  I + +  E     
Sbjct: 512 LFWNFPSGLVLYWIVNNTLSILQQWYITRKYSDEKPAKK 550


>gi|323493773|ref|ZP_08098891.1| membrane protein insertase [Vibrio brasiliensis LMG 20546]
 gi|323311907|gb|EGA65053.1| membrane protein insertase [Vibrio brasiliensis LMG 20546]
          Length = 539

 Score =  336 bits (861), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 141/570 (24%), Positives = 244/570 (42%), Gaps = 43/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         E+    +        +         
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQVAKNPTPQPVEQAQSSSTLPAPSFADELDPAPAQQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                + +  + +    L  SI+  G    + +L  Y  ++ S  P V L   +   + +
Sbjct: 60  -----ASAKTITVTTDVLTLSIDTVGGDVINADLNQYSNELDSADPFVLL--KNEPGHQF 112

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V          +   + + +   +         I + F        +  I    
Sbjct: 113 IAQSGLVGPQGIDLSSTNRPQYAVSADSFVMADGQDELRIPMTFAANGLEYTKTFIVKRG 172

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   V N S +   F     + ++      + T     G      D    +  + 
Sbjct: 173 SYAVDVEYDVVNKSGNNATFGMYAHLRQNLLDAGGSITMPTYRGGAYSTEDTRYKKYSFE 232

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S        W  +   Y+AS +IP  E   +   + + +              
Sbjct: 233 DMQDRNLSLNLVDGQGWAAMIQHYFASAWIPRDEPGTNLYTRVIGNLGD---IGVRMPNK 289

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G S      L+ G K    +         P  ++++D+GW +FIAKP+  L+S+  
Sbjct: 290 TIADGDSANLKATLWVGPKLQDQMAEVA-----PNLDLVVDYGWLWFIAKPLHTLLSFIQ 344

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 345 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 403

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC P++LQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 404 MMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWITDLSAQDPYY-- 461

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 462 -----------------ILPLLMGASMFMIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 504

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SNV++++QQ++I K    +
Sbjct: 505 FPSGLVLYWLVSNVVTLIQQSLIYKALEKK 534


>gi|58578983|ref|YP_197195.1| putative inner membrane protein translocase component YidC
           [Ehrlichia ruminantium str. Welgevonden]
 gi|58417609|emb|CAI26813.1| 60 kD inner-membrane protein [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 575

 Score =  336 bits (861), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 211/585 (36%), Positives = 334/585 (57%), Gaps = 25/585 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N   A+ LSV+I+  W+  Y     E+    +  ++     + +      +    
Sbjct: 1   MLEIRNLVFAVVLSVLIMMGWRLVY-----EKFFTVQHVVEDEDSSSMIPEIDNVLTYRS 55

Query: 61  RAQALSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           R + +  +   RV+L N  + GSI LKGAQ DDL  + YH+   S+S  + LLSP NT+ 
Sbjct: 56  RNEIIDSTQNLRVKLSNKEINGSILLKGAQLDDLVFKNYHITPDSSSDGIILLSPENTEG 115

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            YF E  ++   + I +PN  + W      +L+P   + L + N   ++F+  ++LD++Y
Sbjct: 116 VYFIEFGWIDPQHKIVVPNQLSTWT-SDKSVLSPNNTVTLTWDNQQGVIFQIKVTLDDYY 174

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
           +FKI   + NN+ + +   P GRI R +  T  + +   EG +   G  +L E  Y +I 
Sbjct: 175 MFKIEQIIINNTDNVVNLIPYGRINRARHTTEKSYWISHEGAVGSFGY-TLKEWTYKNII 233

Query: 239 KSSISNFHE----SNSWLGISDKYWASVFIPSKETSFHSQFKYLS----DGHARYQAKFS 290
           K       +     N W+GI+DKYW +  IP+          ++     +   R+Q  FS
Sbjct: 234 KERNIKISQQNTDDNQWVGIADKYWFTALIPNILQKKSKLSFHVKHGKYNNEDRFQVDFS 293

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
            +  +  P K+ ++T++LFAGAKE   +  Y+KDL I  F+  +D+G  YFI KP+F+L+
Sbjct: 294 HDSYSAYPNKTASSTSYLFAGAKELKLLDKYKKDLNISLFDKAVDFGILYFITKPVFLLL 353

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
            YFY+L+GNFG+AI+L T+ +KL+ FPL+ K YVS   +K +QP+I +++E +K    ++
Sbjct: 354 EYFYDLIGNFGLAILLLTIVIKLIMFPLSYKSYVSMFKLKYLQPEILKIKELYKNDNTKM 413

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
             K +  L+K ++++P++G  PIL+QIPVFFA+YKV+ +++EMRHAPF+ W+KDL+  D 
Sbjct: 414 -SKEVSLLFKKNDVSPMSGFIPILIQIPVFFALYKVLFVTIEMRHAPFYLWVKDLSNFDT 472

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-----ADKGQAMILNWMPV 525
            N+ TLFG+L F  P  + +GI P+I+ ++M IQ KM+         DK QA  + ++P 
Sbjct: 473 ANVLTLFGLLNFNPP--ICIGILPVILGITMIIQQKMNTSTHSSQDQDKIQASFIKFLPY 530

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
           VF+F  SSFP GLIIYW  SN I+I+QQ +I    G +  L   L
Sbjct: 531 VFIFIFSSFPTGLIIYWICSNSITIIQQLIIKAYIGRKFNLKHDL 575


>gi|237729027|ref|ZP_04559508.1| inner membrane protein oxaA [Citrobacter sp. 30_2]
 gi|226909649|gb|EEH95567.1| inner membrane protein oxaA [Citrobacter sp. 30_2]
          Length = 548

 Score =  336 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 255/572 (44%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +  +L  Y  ++ S  P   L   +  +  Y
Sbjct: 51  GVPASGQGKLITVKTDVLDLTINTRGGDVEQASLPAYPKELGSTEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               I + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVDKDAFVLADGQNELQIPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGEYAVNVNYSVQNAGEKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I ++   N +  + W+ +  +Y+A+ ++P  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIAENENLNVNAKDGWVAMLQQYFATAWVPRNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|225630056|ref|YP_002726847.1| putative inner membrane protein translocase component YidC
           [Wolbachia sp. wRi]
 gi|225592037|gb|ACN95056.1| putative inner membrane protein translocase component YidC
           [Wolbachia sp. wRi]
          Length = 566

 Score =  336 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 213/563 (37%), Positives = 332/563 (58%), Gaps = 21/563 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    +  +A  LS++I+ +W+  Y        N        + +  +  N  A ++  +
Sbjct: 1   MSEAKSLILAAILSMLIMVSWRIIYDNFFSTNQNQP------LIEHIESFNDLAPIIHQN 54

Query: 61  RAQALSM--SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           R++ ++     RV L N  + GSI+LKGA+FDDL L  YHL+ SS+SP V LLSP+ +K+
Sbjct: 55  RSEIINSTREQRVSLTNNMIKGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESKD 114

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            YFAE  ++  +N I++P+S  VW             + L + N N ILF   I+LD++Y
Sbjct: 115 VYFAEFGWLDPSNKIKVPDSKAVWRADKLN----QKEVNLSWDNENGILFRMKINLDDNY 170

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
           +FK+   V NN+ D +   P G+I R +     + +   EG +    +  L E  Y DI 
Sbjct: 171 MFKVEQVVENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFDN-KLEEWTYKDIS 229

Query: 239 KSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITI 296
           K   I       +W G +DKYW +V IP K    +   K+ + +   ++Q  F  +  +I
Sbjct: 230 KKHLIKANTSEKNWFGFADKYWLTVIIPEKSDKINVSIKHTNANDIDKFQVDFVKSYKSI 289

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
           LPG S +  N+ FAGAK+   +  Y+  L IP F+  +D+G  YFI KP+F+L+ YF  +
Sbjct: 290 LPGASTSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFV 349

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           + NFG+AI+L T+ +KLL  PL+ + YVS   +K++QP++  ++E +K    +   K  I
Sbjct: 350 LKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKVKSLQPELTRVKELYKNDSLK-QHKETI 408

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            L+K +N+NP++  +P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL+A DPTNIFTL
Sbjct: 409 ALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFFLWIKDLSAPDPTNIFTL 468

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFALSS 533
           FG+  +  P  + +GI PII   +M IQ K+S       D  Q  ++ ++P + VF  SS
Sbjct: 469 FGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFSS 526

Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556
           FPAGL+IYW +SN+I+++QQ++I
Sbjct: 527 FPAGLVIYWIFSNIITLIQQSLI 549


>gi|283836139|ref|ZP_06355880.1| hypothetical protein CIT292_10561 [Citrobacter youngae ATCC 29220]
 gi|291068329|gb|EFE06438.1| membrane protein insertase, YidC/Oxa1 family [Citrobacter youngae
           ATCC 29220]
          Length = 548

 Score =  336 bits (860), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 255/572 (44%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +  +L  Y  ++ S  P   L   +  +  Y
Sbjct: 51  GVPASGQGKLITVKTDVLDLTINTRGGDVEQASLPAYPKELGSTEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               I + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQIPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGEYAVNVNYSVQNAGEKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I ++   N +  + W+ +  +Y+A+ ++P  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIAENENLNVNAKDGWVAMLQQYFATAWVPRNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|253997709|ref|YP_003049773.1| 60 kDa inner membrane insertion protein [Methylotenera mobilis
           JLW8]
 gi|253984388|gb|ACT49246.1| 60 kDa inner membrane insertion protein [Methylotenera mobilis
           JLW8]
          Length = 554

 Score =  336 bits (860), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 145/568 (25%), Positives = 242/568 (42%), Gaps = 36/568 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER-----KNIQTVKQPNQVDNSYAAV 56
                  + +  S+ I+  W  +        +          + +   +      + A  
Sbjct: 1   MDTRRLVLFVIFSMSILMLWDAWQTKHAPVPVAPVASVGSVPSTEAGAEVGAEVGAAAID 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
              D A AL     + +       +IN  G     L LR +    + N     LL  +  
Sbjct: 61  APVDTAYALKSGQNIAVTTDLYKININTMGGDLRKLELRKHRA--NDNLSNFLLLDDAAK 118

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
              Y A+   +           ++       +       ++L   +    + +       
Sbjct: 119 PMLYVAQTGLIGQDLPTHNTVFSSTAPSYQMQDGQDKLEVRLSAVSNGVAVDKVYTFHRN 178

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   + NN+   I      +I+   +    +       G           +  + 
Sbjct: 179 RYEIDVNYEIKNNTSVAITPVVYYQIVHDSESNQGSALMPTFTGGTYYTEAGKFKKLAFK 238

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D+ K  ++    ++ W+GI   Y+ S +IP    +    F         ++    +   T
Sbjct: 239 DMAKEPLN-ITTNDGWVGILQHYFVSAWIPKDGLARK--FYTEKLSSNIFRIGTKSTLST 295

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I PG ++T    L++G +    +         P  E  +D+GW   IA P+F L+S  ++
Sbjct: 296 IQPGATLTVPARLYSGPQTKNDLIAAA-----PGLEYSVDYGWLTVIASPLFWLLSKIHS 350

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           LV N+G+AI+L T+ +K  FF L+   Y S A M+ + P++  ++EKF     Q +Q AM
Sbjct: 351 LVQNWGVAIILLTILIKAAFFKLSASGYRSMAQMRELAPRLQSMKEKFGD-DRQKMQMAM 409

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           + LYK   INP+ GC+PIL+Q+PVF A+Y V+  S+E+RHAPF+GWI+DL+A DP     
Sbjct: 410 MDLYKKEKINPMGGCFPILIQVPVFIALYWVLLGSIELRHAPFFGWIQDLSAIDPFY--- 466

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
                           + PI+M  +M +Q K++P P D  QA ++ WMPVVF      FP
Sbjct: 467 ----------------VLPILMGATMIVQTKLNPKPTDPMQAKVMTWMPVVFSVFFFFFP 510

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           AGL++YW  +NV+SI QQ  + KM  AE
Sbjct: 511 AGLVLYWLVNNVLSIAQQWYVNKMIHAE 538


>gi|121596421|ref|YP_988317.1| protein translocase subunit yidC [Acidovorax sp. JS42]
 gi|120608501|gb|ABM44241.1| protein translocase subunit yidC [Acidovorax sp. JS42]
          Length = 570

 Score =  336 bits (860), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 134/593 (22%), Positives = 229/593 (38%), Gaps = 56/593 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNERKNIQTVKQPNQV- 49
           M       + +     +V  W            F+  P  +  +            +   
Sbjct: 1   MNDIRRTILWVIFGFSMVLLWDKWQIHNGNKATFFPTPPAQTASTPAVAASGAGAADVPV 60

Query: 50  --------DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
                     +           A     RV +    L  S + +G       L  Y    
Sbjct: 61  AAASATPGAAAQPPAGASVPPAAAIPRKRVTVSTDVLRLSFDSEGGSLVHGELLQYPEME 120

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV-- 159
               P   LL   +    Y A+   +        P   T   ++ G         +L   
Sbjct: 121 DKTKPF--LLLDESASRVYVAQTGLIGNGAGGAFPTHKTPMAVVPGPRELQDGQNELTVR 178

Query: 160 ---FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTF 214
                     L +        Y   +   V N     +      ++ R    P   ++ +
Sbjct: 179 FESADMGGVKLVKTWTLKRGAYDVAVKHEVVNTGTAPVSPQLYLQLARDGNKPAGESSFY 238

Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHS 273
               G       K   + ++ DIE      +   S+ ++ +   Y+A+ ++        +
Sbjct: 239 STFTGPAVYTEAKKYHKVEFKDIENGKAEIDKSSSDGYVAMVQHYFATAWLLGDGVQRDN 298

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
             + +      Y          I PG+S      LFAG +    +         P  E++
Sbjct: 299 FVRKVD--TNLYSVGMITPLGEIAPGQSKAVDARLFAGPQIETLLEKLA-----PGLELV 351

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
            D+GW   +AKP++ L+   + ++ N+G +I+     +K+ F+ L  K Y S A MK I 
Sbjct: 352 KDYGWLTILAKPLYWLLDQLHKVIANWGWSIVALVFLLKIAFYWLNAKAYASMAKMKAIN 411

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P+I E+RE+ K   PQ +Q+ M+++Y+   +NP+ GC PI++QIPVF A+Y V+  S+EM
Sbjct: 412 PRIMEMRERLKD-KPQQMQQEMMRIYREEKVNPMGGCLPIMIQIPVFIALYWVLLSSVEM 470

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R+AP+ GWIKDL++ DP                     I P++M+LS  +Q  ++P P D
Sbjct: 471 RNAPWIGWIKDLSSPDPFF-------------------ILPLLMTLSSLLQTALNPAPPD 511

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
             QA ++  MP++F      FPAGL++YW  +N++SI QQ +I    G     
Sbjct: 512 PMQAKMMWLMPLMFSVMFFFFPAGLVLYWLTNNILSIAQQWIINTRMGVPPQF 564


>gi|206575787|ref|YP_002241308.1| inner membrane protein OxaA [Klebsiella pneumoniae 342]
 gi|254772998|sp|B5XZP5|OXAA_KLEP3 RecName: Full=Inner membrane protein oxaA
 gi|206564845|gb|ACI06621.1| inner membrane protein OxaA [Klebsiella pneumoniae 342]
          Length = 548

 Score =  336 bits (860), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 144/573 (25%), Positives = 250/573 (43%), Gaps = 55/573 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +           + KN Q  +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN  G   +   L  Y   + S  P   L   +  +  Y
Sbjct: 50  GVPASGQGKLITVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLL--ETTPQFVY 107

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGK-----ILTPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +  +            I L + +    +F +T +L 
Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYSVDKEAFVLADSQDEIVIPLTYTDKAGNVFTKTFTLK 167

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT--------NTFGVQEGFIAVLGD 226
              Y   +  +V N S   +  S  G++ +      +        +T     G      D
Sbjct: 168 RGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTSD 227

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
               + K+  I  +   N    N W+ +  +Y+ + ++P    + +  F   + G+    
Sbjct: 228 TKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPQNNGTNN--FYTANLGNGIVA 285

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
             + +  + + PG++    + L+ G      +         P  ++ +D+GW +FI++P+
Sbjct: 286 IGYKSQPVLVQPGQTDKLQSVLWVGPAIQDKMAAVA-----PHLDLTVDYGWLWFISQPL 340

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+    
Sbjct: 341 FKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++S S+E+RHAPF  WI DL+
Sbjct: 401 K-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLS 459

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
           A DP                     I PIIM  +MF   KMSP    D  Q  I+ +MPV
Sbjct: 460 AQDPYY-------------------ILPIIMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 500

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 501 IFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR 533


>gi|152980131|ref|YP_001355384.1| preprotein translocase YidC subunit [Janthinobacterium sp.
           Marseille]
 gi|166975871|sp|A6T4D7|OXAA_JANMA RecName: Full=Inner membrane protein oxaA
 gi|151280208|gb|ABR88618.1| preprotein translocase YidC subunit [Janthinobacterium sp.
           Marseille]
          Length = 564

 Score =  335 bits (859), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 153/580 (26%), Positives = 239/580 (41%), Gaps = 37/580 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAW----------QNFYVYPRIEEMNNERKN------IQTVKQ 45
                  + +  S  ++  W            F+  P  +                    
Sbjct: 1   MDIKRTVLWVVFSFSLLMLWDNYNRYTGKPSIFFDNPTTQAAKPAAATDDGKTAAAPTAD 60

Query: 46  PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
                   A       + A + S  V +    +   I+  G +   L L  +H    S  
Sbjct: 61  VPTSSAHAANATGVPDSVAPTKSEIVTITTDLIKADIDTVGGEIRHLELLTHHESSDSTK 120

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
            IV  L  S     Y  +   +         +  TV              + L  +    
Sbjct: 121 DIV--LFDSTPPRTYLGQTGLIG-GAYPNHKSLFTVRPGPRSLEAGDQVQLVLEAEQNGV 177

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP--QTATNTFGVQEGFIAV 223
            L +        Y   I   V N +   I  S   +++R        +  +    G    
Sbjct: 178 KLVKTYTFKRGEYKIDIKHDVINKTAAAINPSLYLQLVRDGSKLNNESMFYSTFTGPAVY 237

Query: 224 LGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                  +  +  IEK  I +  +  + W+ +   Y+ S F+P          K L    
Sbjct: 238 SDSDKFQKVTFESIEKGKIEHVVKAESGWIAMVQHYFVSAFVPPANVPREYFTKKL--AT 295

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             Y          + PG + +    L++G +E   +         P FE++ D+GW   I
Sbjct: 296 NLYAVGAIMPMGAVAPGATQSMDATLYSGPQESKRLEAVA-----PGFELVKDYGWLTII 350

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           AKP+F LM   + L+GN+G  I++ T+ +KL FFPL+   Y S A MK + PK+ E+R K
Sbjct: 351 AKPIFWLMIQIHQLLGNWGWTIVVLTIVIKLAFFPLSAASYRSMAKMKLVTPKMTEIRTK 410

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +K   PQ +  AM++LYK   INPL GC PI++QIPVF ++Y V+  S+EMR+AP+  WI
Sbjct: 411 YKG-EPQKMNAAMMELYKKEKINPLGGCMPIVIQIPVFISLYWVLLASVEMRNAPW-LWI 468

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DLA+ D      + G         + +GI PI+M++SMFIQ K++P P D  QA ++ +
Sbjct: 469 SDLASPDTLFGSYMIG------SFHLTIGILPILMAISMFIQTKLNPTPPDPIQAKVMMF 522

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           MP+ F      FPAGL++YW  +N++SI QQ  I K  G 
Sbjct: 523 MPIAFSLMFFFFPAGLVLYWVVNNILSIAQQWTISKKMGI 562


>gi|149911783|ref|ZP_01900387.1| Putative inner membrane protein, 60 kDa [Moritella sp. PE36]
 gi|149805129|gb|EDM65151.1| Putative inner membrane protein, 60 kDa [Moritella sp. PE36]
          Length = 547

 Score =  335 bits (859), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 136/568 (23%), Positives = 247/568 (43%), Gaps = 40/568 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  V I L  +    +  +        +    +        +    S ++    +
Sbjct: 1   MESQRNLLV-IGLLFVSFLLFTEWQNKDNPVAVPTTTQAFTNGLTGDVPAGSDSSTDAPN 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
             Q    +  + + +  L  +I+  G      +L  +  ++ +      L   ++  N Y
Sbjct: 60  SKQ---SNNLITISSDVLELTIDTLGGDIVRADLLEHATELDAEERFTLL--QNDATNVY 114

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNANNILFERTISL-DEH 177
            A+   +         N    ++  +        T  I L + +AN + F +  +L   +
Sbjct: 115 VAQSGLIGANGPDANVNGRPQYSTTATSFTISGDTLSIPLSYTDANGVEFTKIFTLTRGN 174

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRH---KPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
           Y   +   + N S + I     G++ ++      T ++         A+       E+  
Sbjct: 175 YDVDVSYKINNQSANAISVQMYGQLKQNIDLSEDTGSSMMMQAYRGAALGTTDKRYEKYD 234

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ--AKFSAN 292
            D    +  +   +  W+G+   Y+ S +IP    +             + Q    F   
Sbjct: 235 FDDISDANLSRTTTAGWVGMLQHYFVSAWIPGNSQNHFYTLNIGRTDFTQGQAIIGFKQP 294

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
              I      T +  L+ G K    +        +   ++ +D+ W +FIA+P+F L+ +
Sbjct: 295 VEAIAANSETTISAKLWLGPKLQDQMGEL-----VEGLDLTVDYSWLWFIAQPLFQLLQF 349

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
           F+ LVGN+GIA+++ T  V+   +PL K QY S A M+ +QPK+  LREK      Q + 
Sbjct: 350 FHGLVGNWGIAVIMITFTVRGAMYPLTKAQYTSMAKMRLLQPKLTALREKCGDDK-QKMS 408

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           ++M+ LYK   +NPL GC+P+++Q+P+F ++Y  +  S+E+RHAPF  WI DL+A DP  
Sbjct: 409 QSMMALYKEEKVNPLGGCFPMIIQMPIFISLYWALMESVELRHAPFALWINDLSAQDPYY 468

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531
                              + P++M ++M++  KMSP    D  Q  ++ +MPV+F F  
Sbjct: 469 -------------------VLPLLMGVTMYMIQKMSPTQVQDPMQQKVMQFMPVMFTFFF 509

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKM 559
             FPAGL++YW  SNV++I+QQ +I + 
Sbjct: 510 LWFPAGLVLYWLMSNVVTIIQQTIIFRS 537


>gi|62182329|ref|YP_218746.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|75505468|sp|Q57HZ7|OXAA_SALCH RecName: Full=Inner membrane protein oxaA
 gi|62129962|gb|AAX67665.1| putative Preprotein translocase subunit YidC [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
          Length = 548

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 142/572 (24%), Positives = 250/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN  G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTHGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTQTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTSAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|317050194|ref|YP_004117842.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Pantoea sp. At-9b]
 gi|316951811|gb|ADU71286.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Pantoea sp. At-9b]
          Length = 548

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 246/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N F+ IA   +    WQ +           +        Q  Q  NS A      
Sbjct: 1   MDSQRNLFL-IAFLFVSFMIWQAW---------QTDHAPQPQQTQTTQTTNSTAGDAATS 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +K   L  +IN +G   +  +L  Y   + S++P   L   +     Y
Sbjct: 51  GVPGSGQGKTITVKTDVLSLNINTRGGDIEQASLLTYPDKLGSDAPFQLL--ETTPAFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK-----LVFKNANNILFERTISLD 175
            A+             N        +                L +   N +++ +T    
Sbjct: 109 QAQSGLTGRNGPDNPNNGARPLFTTTQDHFEMAEGQTELRVPLTWTGENGVVYTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGF--IAVLGDK 227
              +   +   + N S   +  +  G++ +         T +N F +           D 
Sbjct: 169 RGEFAVNVDYNINNASQQPLEVAMFGQLKQTIEVPKHRDTGSNNFALHTFRGAAYSTSDA 228

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N   SN W+ +  +Y+A+ ++P   T   +     + G+     
Sbjct: 229 KYEKYKFDTINDNENLNTTTSNGWVAMLQQYFATAWVPR--TEGTNTLYTSNLGNGVAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  +TI PG        L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSAPVTIAPGAQQNLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF  WI DL+A
Sbjct: 402 -QKMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFILWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I P+IM ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPVIMGITMFFIQKMSPTTVTDPMQQKIMTYMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533


>gi|114798266|ref|YP_759144.1| inner membrane protein, 60 kDa [Hyphomonas neptunium ATCC 15444]
 gi|114738440|gb|ABI76565.1| inner membrane protein, 60 kDa [Hyphomonas neptunium ATCC 15444]
          Length = 606

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 199/613 (32%), Positives = 307/613 (50%), Gaps = 39/613 (6%)

Query: 1   ME--RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL- 57
           ME     N+ +A+A  +  V+ +Q F + P  +    E+      +Q    D   A +L 
Sbjct: 1   MEPQEQRNFLIAMAAMIAFVFLYQYFVMEPAQKRYEAEQAVAVAAEQAAVTDTGVAEILG 60

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
                 AL+   RV+    ++ G+I L GA+ DDL+L+ ++  V   +  + LL P  T+
Sbjct: 61  PKSLEDALAEDGRVKFDANAVDGTIRLAGARIDDLSLKQFYTTVEREAE-IRLLRPEATE 119

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
            AYF    +     N  +   N+VW  + G  LT  TP+ L  +    +  +R IS+D +
Sbjct: 120 GAYFGTYYW--ADGNALVAGRNSVWTQVGGDTLTTATPVTLRLETEG-MTIDREISIDAN 176

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKP-----------------QTATNTFGVQEGF 220
           Y+F   DT+TN S         G   RH                          GV +G 
Sbjct: 177 YMFSFRDTLTNTSGAARTVRAIGSFERHGDWKRFLEITDPASATSGGPAHLGLMGVADGE 236

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF-KYLS 279
           + +   K L++ K    E    + F +   W G++D YW    +P +   F +   +   
Sbjct: 237 LRLQKYKPLMQSKKISGESGEGTFFSDEGGWWGLTDMYWMGALVPEQARPFTASVNRASL 296

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
                 + +     I + PG S+T  N LFAGAK+F  +  YEK   +PRF   IDWGW 
Sbjct: 297 ARGGPLEVRTEGAAIEVAPGASVTVENGLFAGAKQFEVLQGYEKS-GLPRFVDAIDWGWA 355

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           YF+ KP F ++ +    +G+FG +I+  TV VKL   PL    + S A +K +Q  + +L
Sbjct: 356 YFLTKPFFYVLHWLNGYLGSFGWSILAFTVLVKLPLVPLYNASFKSMAKLKKLQEPMKQL 415

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
            E+F  + PQ  Q+ +++LYK    NP+ GC PIL  IP+F+A+YK + +SLEMRHAP +
Sbjct: 416 NERFA-ADPQRKQQELMKLYKEEGANPIGGCLPILFTIPIFYALYKTLYVSLEMRHAP-F 473

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPG----------FMHVGIWPIIMSLSMFIQMKMSP 509
            ++KDL+A DPT I  LFG++PF+              + +GI PI+   +M     +SP
Sbjct: 474 AYLKDLSAPDPTAIGNLFGLIPFWSGADVKSIPIIGIIIGIGILPILYGATMAALQSLSP 533

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           PP DK QA I+  MP+VF+F    F AGL++YW WSNV++ +QQ +IM+M+G E  L   
Sbjct: 534 PPPDKMQARIIMAMPIVFMFVFGGFAAGLVMYWVWSNVLTFIQQYIIMRMNGVETELGKF 593

Query: 570 LRSTFS-KNYNSQ 581
           + +    K   ++
Sbjct: 594 VATRLGLKKAQAE 606


>gi|307611885|emb|CBX01601.1| hypothetical protein LPW_32881 [Legionella pneumophila 130b]
          Length = 556

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 136/579 (23%), Positives = 253/579 (43%), Gaps = 41/579 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-----PNQVDNSYAAV 56
                  + +AL++I +  W  + +    ++   E+   Q              N+   V
Sbjct: 1   MDIRRIVLYMALALIGLSLWNAWQIDYPAKQPVEEKTASQLTSDGHLLPQIIPSNAEQPV 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
            +    +A S    +++K   L   I+LK        L  Y L V   +    LL    +
Sbjct: 61  TLKAEEKASSGKQLIQVKTDVLDVDIDLKNGDIVKGLLLDYPLSVEDKNKPFPLLQNQAS 120

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFERTISL 174
           +        +V      +  + +        ++        + L  K+ + +  ++    
Sbjct: 121 QRYVANSSLFVLDGQTPQSLDFDFTSEKEYYELKPDQNQLIVTLNGKSEDGLDVKKEFVF 180

Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA----VLGDKSL 229
               YL ++   + N      +     +++R  P+   ++      +        G    
Sbjct: 181 TKGSYLIEVNYKIANIGNSLWKGYFNTQLLRSSPKEDKSSIFHIGSYTGASFSNPGKTRY 240

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
            +  +SD+ KS++        W+ +   Y+ S ++P+ ++               Y    
Sbjct: 241 QKVSFSDMSKSNLD-VDAKGGWIAMQQHYFLSAWVPNADSENKFYTLATDKD---YTIGA 296

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            +  IT+ P +     + L+ G +    +         P  ++ +D+G  +F++  +F L
Sbjct: 297 VSQPITVKPKEDKIVGSKLYIGPEITSVLKGIS-----PSLDLTVDYGILWFLSSLLFSL 351

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           M   Y +VGN+G +I+L TV +KL F+ L+   Y S A+M+ +QPK+  LRE++     +
Sbjct: 352 MKAIYTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAK 411

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + +A ++LYK   +NPL GC PIL+QIPVF A+Y V+  S+E+R APF  WI DLA+AD
Sbjct: 412 -ISQATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASAD 470

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529
           P +                   + P+IM  +M IQ K++P PAD  QA ++ ++P++F  
Sbjct: 471 PYH-------------------VLPLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTG 511

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
              +FP+GL++YW  +N +SI+QQ  I + +  E     
Sbjct: 512 LFWNFPSGLVLYWIVNNTLSILQQWYITRKYSDEKPAKK 550


>gi|88608477|ref|YP_506289.1| inner membrane protein, 60 kDa [Neorickettsia sennetsu str.
           Miyayama]
 gi|88600646|gb|ABD46114.1| inner membrane protein, 60 kDa [Neorickettsia sennetsu str.
           Miyayama]
          Length = 566

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 180/569 (31%), Positives = 302/569 (53%), Gaps = 22/569 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M++ +N F+A  LS +++  W   +  P   E  +E +  ++VK    ++++ +      
Sbjct: 1   MQQTYNVFIATLLSFLVIIGWNLVFYNPTQRESFHEVQKKESVKVYESLESTLS------ 54

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                  + R+++ +  L GSI L G   DDL L+ Y  D   +     LL P+ TK AY
Sbjct: 55  -------TERIKISSSKLEGSIQLTGLALDDLILKDYKSDDLKDQ--YRLLYPNKTKGAY 105

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
           F    +    +      S+        ++LTP +P+   + N   +LF+  +S+D++Y+F
Sbjct: 106 FINPGWTIPGDPGLRTPSSKTKWQADSELLTPGSPVTFSWDNGFGLLFKVVVSIDDNYMF 165

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK----SLVEQKYSD 236
                V N S + +       I +  P+T  +   + EG + V+ D+       +    +
Sbjct: 166 TFKQIVENKSQNDLSVGSHFTITKSLPETNKSMLIMHEGPVGVVKDQLMELKYSKIAKKN 225

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
              +   +      W G SDKYW    I    +       ++ D         + N   I
Sbjct: 226 KSIAFDEDTQNQRGWFGFSDKYWFVSQIFENSSDGKVYISHIDDKSDDIFRITNFNAQKI 285

Query: 297 LPGKSITT-TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           + G  +      LFAG K+   +  Y +++ I  F+  +D+G  YFI KP+  L+  F++
Sbjct: 286 VRGGGLIVKETMLFAGPKKLSLLEEYAQNMRIYLFDRAVDFGVLYFITKPISKLLQVFHH 345

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           LVGNFG+AI+L T F+++L  PL+ K  +S   +K +QP+I +++  ++      L +A 
Sbjct: 346 LVGNFGVAIILLTFFIRVLMLPLSIKSGISMFKIKELQPEILKIKSMYQNDKD-ALNRAS 404

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++L++ H + P++GC P LLQ+PVFFA+YKVI I++EMR APF+ WI DL+  DPTN+FT
Sbjct: 405 VELFRKHRVTPMSGCLPTLLQVPVFFALYKVIFITVEMRQAPFFLWISDLSLPDPTNLFT 464

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK-GQAMILNWMPVVFVFALSSF 534
           LFG++ +  P F+ +GI PII+ L+M IQ K+SP   D   QA ++  MP VF+   +SF
Sbjct: 465 LFGLIDWNCPDFLSIGILPIILGLTMVIQQKLSPSHYDDGTQAFMIKAMPYVFMILFASF 524

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           P+GL++YW ++NV+S++QQ VI K    +
Sbjct: 525 PSGLVLYWVFNNVLSLLQQFVIGKYLFTK 553


>gi|148361343|ref|YP_001252550.1| preprotein translocase subunit YidC [Legionella pneumophila str.
           Corby]
 gi|296108684|ref|YP_003620385.1| preprotein translocase YidC subunit [Legionella pneumophila 2300/99
           Alcoy]
 gi|166975873|sp|A5IIK4|OXAA_LEGPC RecName: Full=Inner membrane protein oxaA
 gi|148283116|gb|ABQ57204.1| Preprotein translocase subunit YidC [Legionella pneumophila str.
           Corby]
 gi|295650586|gb|ADG26433.1| preprotein translocase YidC subunit [Legionella pneumophila 2300/99
           Alcoy]
          Length = 556

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 140/580 (24%), Positives = 255/580 (43%), Gaps = 42/580 (7%)

Query: 1   MERNWNYFVAIALSVI---IVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ--VDNSYAA 55
           M+      + +AL++I   +  AWQ  Y   +  E     +         Q    N+   
Sbjct: 1   MDI-RRIVLYMALALIGLSLWNAWQIDYPAAQPVEDKTASQLTSDGHLLPQIIPSNAEQP 59

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
           V +    +A S    +++K   L   I+LK        L  Y L V   +    LL    
Sbjct: 60  VTLKAEEKASSGKQLIQVKTDVLDVGIDLKNGDIVKGLLLDYPLSVEDKNKPFPLLQNQA 119

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFERTIS 173
           ++        +V      +  + +        ++        + L  K+ + +  ++   
Sbjct: 120 SQRYVANSSLFVLDGQTPQSLDFDFTSEKEYYELKPDQNQLIVTLNGKSEDGLDVKKEFV 179

Query: 174 L-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA----VLGDKS 228
                YL ++   + N      +     +++R  P+   ++      +        G   
Sbjct: 180 FTKGSYLIEVNYKIANTGNSLWKGYFNTQLLRSSPKEDKSSIFHIGSYTGASFSNPGKNR 239

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             +  +SD+ KS++        W+ +   Y+ S ++P+ ++               Y   
Sbjct: 240 YQKVSFSDMSKSNLD-VDAKGGWIAMQQHYFLSAWVPNADSENKFYTLATDKD---YTIG 295

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
             +  IT+ P +     + L+ G +    +         P  ++ +D+G  +F++  +F 
Sbjct: 296 AVSQPITVKPKEDKIVGSKLYIGPEITSVLKGIS-----PSLDLTVDYGILWFLSSLLFS 350

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           LM   Y +VGN+G +I+L TV +KL F+ L+   Y S A+M+ +QPK+  LRE++     
Sbjct: 351 LMKAIYTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKA 410

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           + + +A ++LYK   +NPL GC PIL+QIPVF A+Y V+  S+E+R APF  WI DLA+A
Sbjct: 411 K-ISQATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASA 469

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP +                   + P+IM  +M IQ K++P PAD  QA ++ ++P++F 
Sbjct: 470 DPYH-------------------VLPLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFT 510

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
               +FP+GL++YW  +N +SI+QQ  I + +  E     
Sbjct: 511 GLFWNFPSGLVLYWIVNNTLSILQQWYITRKYSDEKPAKK 550


>gi|157373143|ref|YP_001471743.1| 60 kDa inner membrane insertion protein [Shewanella sediminis
           HAW-EB3]
 gi|189036364|sp|A8FP42|OXAA_SHESH RecName: Full=Inner membrane protein oxaA
 gi|157315517|gb|ABV34615.1| 60 kDa inner membrane insertion protein [Shewanella sediminis
           HAW-EB3]
          Length = 544

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 140/565 (24%), Positives = 241/565 (42%), Gaps = 38/565 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +      + +  E  +       +   +S        
Sbjct: 1   MESQRN-ILLIGLLFVSFLLWQQWQTDQAPQPVAMESSSTIPSSSTSDSHSSDVPDADSA 59

Query: 61  -RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A  ++    + +    LI  IN  G       L  + L++  + P V L    +    
Sbjct: 60  LPAAVVASKELITVNTDQLIIKINPIGGDIVYSALVEHKLELDKDEPFVLLEQTKDIN-- 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISL- 174
           Y A+   +              ++  S +        T  + L F   N   + +     
Sbjct: 118 YIAQSGLIGRNGIDSSSKGRAHFDSASREYTLASGQDTLEVPLTFVADNGATYTKMFVFH 177

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
              +   +   + N++  Q++    G+I     Q+ ++         A     +  E+  
Sbjct: 178 RGQFKVDVDYVIDNSTDQQLQVQMYGQIKHSIKQSESSMMMPTYRGAAFSTANTRYEKYS 237

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
            D       +      W  +   Y+ S ++P             + G A     F     
Sbjct: 238 FDDMADKNLDEKTLGGWAAMLQHYFVSAWVPPANDQNIIFSSISAGGQAN--IGFRGAVY 295

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
            + PG + T  +  + G K    +    +        +++D+G+ +++A P++ L+ +F 
Sbjct: 296 DVAPGATQTINSEFYVGPKNQEALSAISES-----LNLVVDYGFLWWLAVPIYKLLMFFQ 350

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           +LV N+G+AI+L T+ V+ + +PL K QY S A M+N+QPK+ E++E+F     Q + +A
Sbjct: 351 SLVTNWGLAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLAEMKERFGD-DRQKMGQA 409

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NP+ GC PILLQ+P+F A+Y V+  S+E+RHAPF  WI DL+  DP    
Sbjct: 410 MMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQDPYY-- 467

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALS 532
                            + PI+M +SMF+  KM P  P  D  Q  ++ WMPVVF     
Sbjct: 468 -----------------VMPILMGISMFVMQKMQPMAPTMDPMQQKMMQWMPVVFTVFFL 510

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIM 557
            FPAGL++YW   N+++I QQ +I 
Sbjct: 511 WFPAGLVLYWLVGNLVAITQQKIIY 535


>gi|262371177|ref|ZP_06064498.1| inner membrane protein oxaA [Acinetobacter johnsonii SH046]
 gi|262313907|gb|EEY94953.1| inner membrane protein oxaA [Acinetobacter johnsonii SH046]
          Length = 587

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 140/589 (23%), Positives = 242/589 (41%), Gaps = 68/589 (11%)

Query: 11  IALSVIIVYAWQNFYVYPRIEEMNNERK-----------NIQTVKQPNQVDNSYAAVLID 59
             ++ +++ AWQ  Y +   +    +             N QT    + +  +  A    
Sbjct: 14  FVVAYLLILAWQKDYGHAETQPQPQQAAAVSHEVSADLPNAQTASAASDMPQANIATQQP 73

Query: 60  DRAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                 S++ + + ++       IN KG     + L  +     SN   V L   S+ K 
Sbjct: 74  ATEAKASVNQQLISVQTDLYHLWINPKGGDIVRIELLNHDKSKDSNEAFVML--ESDAKR 131

Query: 119 AYFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNA 163
            Y A+   +         +   ++                   GK +   T   ++    
Sbjct: 132 TYVAQSGLIGLNGPDSNRSGRPMYEIEKSAYTLNDAKAVQTEDGKSIKVLTVPMVLKTAD 191

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEG 219
              + +        Y   +   V N S    +    G++ R             F +   
Sbjct: 192 GVEIIKTFTFKQGEYPVVVNHKVVNRSGQNWQGQMFGQLKRDNSDDPGKSDQGIFTLGTF 251

Query: 220 FIAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK-------ETS 270
                G       + K+++  +  ++       W+ +   Y+ S +IP            
Sbjct: 252 LGGAWGSPEEHYNKLKFANFNEEKLN-VEAKGGWVAMVQHYFVSAWIPGDLKLTQANGQP 310

Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
           + ++ +            F++  IT+  G         ++G K    +            
Sbjct: 311 YVAKLESRKSTDDMNIIGFTSPTITVPAGTVAEIDATFYSGPKVQSELKELAT-----GL 365

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
              +D+GW + IAK +F+ + +F+ LVGN+G AI+L TV VKL+ +PL+ K Y S A M+
Sbjct: 366 NQTVDYGWLWPIAKLLFLGLEFFHGLVGNWGWAIILLTVLVKLILWPLSSKSYRSMAKMR 425

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            I P++  ++E+F         + M+ LYK   +NPLAGC P+LLQ+P+F A+Y V+  S
Sbjct: 426 VIAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLAGCLPLLLQMPIFLALYWVLMES 484

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +E+RHAP+  WI+DL+A DP                     I P++M  +MFIQ  ++P 
Sbjct: 485 VELRHAPWLLWIQDLSAMDPWF-------------------ILPLLMGATMFIQQSLNPQ 525

Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           PAD  QA +   MP+VF   +  FPAGL++YW  +N I+I+QQ +I K 
Sbjct: 526 PADPMQAKVFKIMPIVFTVFMLFFPAGLVLYWIVNNSITIIQQTLINKS 574


>gi|161610372|ref|NP_886531.2| putative inner membrane protein translocase component YidC
           [Bordetella parapertussis 12822]
 gi|38502926|sp|Q7W2K1|OXAA_BORPA RecName: Full=Inner membrane protein oxaA
          Length = 563

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 151/581 (25%), Positives = 250/581 (43%), Gaps = 53/581 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M+      + +  S  ++  W N+         +  P  E    ++              
Sbjct: 1   MDI-RRTVLWMIFSFSLLLLWNNWQIHNGKPSLFGGPAPEAAATQQPKADANGTAASSTA 59

Query: 52  SYAAVLIDDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
           S  +      A A              +V +    L  + +  GAQ     L  Y     
Sbjct: 60  SIPSSPAAAPAAASVPGAAAPAAAKSEQVVITTDVLRLTFDSNGAQLIRAELLKYPSSSQ 119

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVF 160
           S+ P V +    +    Y A+   V        P   T ++L+S +      T  +    
Sbjct: 120 SDKPTVLM--DRSADLVYVAQTGVVGAPQGESFPTHQTPFHLVSSERSLTGDTLDVVFEA 177

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQE 218
           ++    + +        Y   +   + N     +  +   ++ R    P   ++ +    
Sbjct: 178 ESGGLKVTKTYTLHRGRYDVDVRHAMANTGGAPLSPALYLQLERDGTDPAGTSSFYHTFT 237

Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKY 277
           G           +  +SDIEK   +   +  N W+GI   Y+A+ +IP++     ++   
Sbjct: 238 GVAVYSEQDKFQKVTFSDIEKKKGTYIKQADNGWIGIVQHYFATAWIPAQGKQRTNEL-- 295

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337
           L      Y A+      TI PG S      L+ G ++   +         P  E+++D+G
Sbjct: 296 LQVQQNLYAARTIEAVGTIAPGSSANVDAHLWVGPQDQKAMAAVA-----PGLELVVDYG 350

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W   IAKP+F LM++ + L+GN+G  I+  TV +K +FFPLA   Y S A MK + P++ 
Sbjct: 351 WLTIIAKPLFTLMTWLHGLLGNWGWTIVALTVIIKAVFFPLAAASYRSMARMKQVAPRLQ 410

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
            L+EK+     Q L +AM+++Y+T  INPL GC P+++QIPVF A+Y V+  S+EMR AP
Sbjct: 411 ALKEKYGD-DRQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAP 469

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           +  W+ DL+  DP                     I P IM  +MF+Q+K++P P D  QA
Sbjct: 470 WILWVHDLSVRDPFF-------------------ILPAIMMATMFLQIKLNPTPPDPVQA 510

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            ++  MP+VF   +  FPAGL++YW  +N +SI QQ  I +
Sbjct: 511 KVMMIMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWTITR 551


>gi|240949810|ref|ZP_04754139.1| putative inner membrane protein translocase component YidC
           [Actinobacillus minor NM305]
 gi|240295727|gb|EER46422.1| putative inner membrane protein translocase component YidC
           [Actinobacillus minor NM305]
          Length = 554

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 143/559 (25%), Positives = 246/559 (44%), Gaps = 50/559 (8%)

Query: 21  WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIG 80
           WQ  +           +K  Q   Q    D   A     + A++ S    + +++  L  
Sbjct: 23  WQQDFNP-----EIQAQKQAQIQAQQQSGDVPAATSQTQNVAESNSKGKTITIESDVLRL 77

Query: 81  SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140
           +++  G    D +L  +H ++ SN+P   L    N+K  Y A+   +             
Sbjct: 78  TVDTLGGDVIDSDLLKHHAELHSNTPFELL--QDNSKVLYVAQSGLIGKNGIDTNNGRAQ 135

Query: 141 VWNLISGKILTPTT---PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFS 197
                    L        + L F+    +  +        Y   +   + NNS + +   
Sbjct: 136 YQTTADSFKLAEGQNEISVPLTFEKDGVVYTKTFTLKRGSYNVGVDFNIKNNSAEVVEVQ 195

Query: 198 PRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN-----------F 245
           P G++     +++ + T     G      + +  +  + ++                   
Sbjct: 196 PYGQLKHTLVESSGSLTMPTYTGGAYSSSETNYKKYSFQEMADEKKRKAEQGIANGGLSI 255

Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305
             +  W+ I   Y+ S ++P ++       +   +G A     +     ++ P    T +
Sbjct: 256 ESNTGWVAILQHYFVSAWVPQQDKPMTIYTRVSDNGVA--TIGYRGALTSVAPNSDATIS 313

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
             L+ G K+   +            ++  D+GW +FIAKP+F L++    LV N+G+AI+
Sbjct: 314 THLWTGPKDQKEMAETAA-----HLDLTADYGWAWFIAKPLFWLLTQIQKLVVNWGLAII 368

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
             T+ VK L +PL K QY S A M+ +QP+I E+RE+F     Q + + M++LYK   +N
Sbjct: 369 CVTIVVKTLLYPLTKAQYTSMAKMRMLQPRIQEMRERFGD-DRQRMSQEMMKLYKEEKVN 427

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           P+ GC PIL+Q+P+F A+Y     ++E+RHAPF+GWI+DL+A DP               
Sbjct: 428 PMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------------- 474

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
                 I P++M  SMF+  KMSP P AD  Q  ++ +MPV+F      FP+GL++YW  
Sbjct: 475 ------ILPLLMGGSMFLLQKMSPTPIADPVQQKVMTFMPVMFTVFFLWFPSGLVLYWLT 528

Query: 545 SNVISIVQQAVIMKMHGAE 563
           SN I+IVQQ +I +    +
Sbjct: 529 SNCITIVQQWLIYRQLEKK 547


>gi|33591704|ref|NP_879348.1| putative inner membrane protein translocase component YidC
           [Bordetella pertussis Tohama I]
 gi|161609254|ref|NP_891527.2| putative inner membrane protein translocase component YidC
           [Bordetella bronchiseptica RB50]
 gi|54038802|sp|P65623|OXAA_BORBR RecName: Full=Inner membrane protein oxaA
 gi|54041691|sp|P65622|OXAA_BORPE RecName: Full=Inner membrane protein oxaA
 gi|33571347|emb|CAE44824.1| probable inner-membrane protein [Bordetella pertussis Tohama I]
 gi|332381123|gb|AEE65970.1| putative inner membrane protein translocase component YidC
           [Bordetella pertussis CS]
          Length = 563

 Score =  335 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 151/581 (25%), Positives = 250/581 (43%), Gaps = 53/581 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M+      + +  S  ++  W N+         +  P  E    ++              
Sbjct: 1   MDI-RRTVLWMIFSFSLLLLWNNWQIHNGKPSLFGGPAPEAAATQQPKADANGTAASSTA 59

Query: 52  SYAAVLIDDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
           S  +      A A              +V +    L  + +  GAQ     L  Y     
Sbjct: 60  SIPSSPAAAPAAASVPGAAAPAAAKSEQVVITTDVLRLTFDSNGAQLIRAELLKYPSSSQ 119

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVF 160
           S+ P V +    +    Y A+   V        P   T ++L+S +      T  +    
Sbjct: 120 SDKPTVLM--DRSADLVYVAQTGVVGAPQGESFPTHQTPFHLVSSERSLTGDTLDVVFEA 177

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQE 218
           ++    + +        Y   +   + N     +  +   ++ R    P   ++ +    
Sbjct: 178 ESGGLKVTKTYTLHRGRYDVDVRHAMANTGGAPLNPALYLQLERDGTDPAGTSSFYHTFT 237

Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKY 277
           G           +  +SDIEK   +   +  N W+GI   Y+A+ +IP++     ++   
Sbjct: 238 GVAVYSEQDKFQKVTFSDIEKKKGTYIKQADNGWIGIVQHYFATAWIPAQGKQRTNEL-- 295

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337
           L      Y A+      TI PG S      L+ G ++   +         P  E+++D+G
Sbjct: 296 LQVQQNLYAARTIEAVGTIAPGSSANVDAHLWVGPQDQKAMAAVA-----PGLELVVDYG 350

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W   IAKP+F LM++ + L+GN+G  I+  TV +K +FFPLA   Y S A MK + P++ 
Sbjct: 351 WLTIIAKPLFTLMTWLHGLLGNWGWTIVALTVIIKAVFFPLAAASYRSMARMKQVAPRLQ 410

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
            L+EK+     Q L +AM+++Y+T  INPL GC P+++QIPVF A+Y V+  S+EMR AP
Sbjct: 411 ALKEKYGD-DRQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAP 469

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           +  W+ DL+  DP                     I P IM  +MF+Q+K++P P D  QA
Sbjct: 470 WILWVHDLSVRDPFF-------------------ILPAIMMATMFLQIKLNPTPPDPVQA 510

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            ++  MP+VF   +  FPAGL++YW  +N +SI QQ  I +
Sbjct: 511 KVMMIMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWTITR 551


>gi|330861750|emb|CBX71924.1| inner membrane protein oxaA [Yersinia enterocolitica W22703]
          Length = 548

 Score =  335 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 137/571 (23%), Positives = 241/571 (42%), Gaps = 52/571 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ + V    +      +        ++   +        
Sbjct: 1   MDSQRNLLL-IALLFVSFMIWQAWQVDNNPQPAAQTTQQTANTATGDKASQAVPGS---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +K   L  +IN +G   +  NL  Y   + S+     L   +     Y
Sbjct: 56  -----GQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+      +      N       +               I L F   +  +F +T  L 
Sbjct: 109 QAQSGLTGKSGPDNPANGERPLFEVPQTSFVLADGQDELRIPLTFTGKDGSVFTKTFVLK 168

Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
            +     +   V N S   +  +  G++ +         T +N F +     A       
Sbjct: 169 RNDYAIGVDYHVKNASAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDET 228

Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             +KY     +    +      W+ +  +Y+A+ +IP+      + F     G+      
Sbjct: 229 KYKKYSFSDIEDKSLDITTKGGWVAMLQQYFATAWIPAANE--TNTFYSADLGNGLAAIG 286

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
           F    + I PG+       L+ G +    +         P  ++ +D+GW +FI++P+F 
Sbjct: 287 FKGAPVVIQPGEQKQLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFK 341

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      
Sbjct: 342 LLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK- 400

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q + + M+ LYK   +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A 
Sbjct: 401 QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQ 460

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527
           DP                     I PI+M ++M+   KMSP    D  Q  I+ +MPV+F
Sbjct: 461 DPYY-------------------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIF 501

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                 FPAGL++Y+  SN+++I+QQ +I +
Sbjct: 502 TVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 532


>gi|238899054|ref|YP_002924736.1| protein involved in protein translocation and folding, substrates
           includes ATP synthase, SecYEG, LacY [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229466814|gb|ACQ68588.1| protein involved in protein translocation and folding, substrates
           includes ATP synthase, SecYEG, LacY [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 547

 Score =  335 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 140/571 (24%), Positives = 254/571 (44%), Gaps = 51/571 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IA   +    WQ + V      +         V   N  + S    L + 
Sbjct: 1   MDSQRNLLL-IAFFFVSFMIWQTWQVDHNP--LKAVENGTALVTNNNGTETSTLVPLSN- 56

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                +   ++ +    L  +I+ +G      NL  Y   + S      L   S     Y
Sbjct: 57  -----TQGQKITVTTDVLSLTIDTQGGDIQQANLLAYPDTLGSKKSFQLL--ESTPDFVY 109

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N +     +               I L F + N ++  +T  L 
Sbjct: 110 EAQSGLTGKNGPDNPLNGHRPVYSVKQPHFVLPEGQNELQIPLTFTDKNGLVLTKTFILK 169

Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMR------HKPQTATNTFGVQEGFIAVLGDKS 228
            +    +++  + N S   + F+  G++ +      H+   ++N         A    + 
Sbjct: 170 RNDYAIRVLYRINNASSTPLEFNFFGQLKQSTQLPKHRDTASSNFALHTYRGAAYSSKED 229

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             ++      + +  N      W+ +  +Y+A+ +IP+   +     ++L  GH    + 
Sbjct: 230 KYKKYSFSDIEDANLNITTQGGWVAMLQQYFATAWIPNAGETHDFYSRHL--GHGLVASG 287

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
           F +  + + PG+    +  L+ G +    +         P  ++ +D+GW +FI++P+F 
Sbjct: 288 FKSLPVLVNPGEQKELSATLWVGPELQDKMAVIA-----PHLDLTVDYGWLWFISQPLFK 342

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+ + +  VGN+G++I+L T  V+ + +PL K QY S A M+ +QPK+ E+RE+      
Sbjct: 343 LLKFIHGFVGNWGLSIILITFIVRGIMYPLTKAQYTSMAKMRMLQPKLTEMRERIGD-DR 401

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q + + M+ LYK+  +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A 
Sbjct: 402 QRMSQEMMALYKSEKVNPLGGCLPLIIQMPIFLALYYMLMGSVELRHAPFILWIHDLSAQ 461

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527
           DP                     I PI+M L+M+   KMSP    D  Q  I+N+MPV+F
Sbjct: 462 DPYY-------------------ILPILMGLTMYFIQKMSPSTITDPMQKKIMNFMPVIF 502

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                 FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 503 TVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|16762484|ref|NP_458101.1| inner membrane protein translocase component YidC [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29143972|ref|NP_807314.1| inner membrane protein translocase component YidC [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|213052693|ref|ZP_03345571.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E00-7866]
 gi|213424948|ref|ZP_03357698.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E02-1180]
 gi|38503116|sp|Q8Z2N7|OXAA_SALTI RecName: Full=Inner membrane protein oxaA
 gi|25299103|pir||AF0957 probable membrane protein STY3938 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16504789|emb|CAD03154.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139608|gb|AAO71174.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 548

 Score =  335 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 142/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|193069129|ref|ZP_03050086.1| inner membrane protein OxaA [Escherichia coli E110019]
 gi|192957453|gb|EDV87899.1| inner membrane protein OxaA [Escherichia coli E110019]
          Length = 548

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 141/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++     V+Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQVQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|320354720|ref|YP_004196059.1| protein translocase subunit YidC [Desulfobulbus propionicus DSM
           2032]
 gi|320123222|gb|ADW18768.1| protein translocase subunit yidC [Desulfobulbus propionicus DSM
           2032]
          Length = 549

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 148/563 (26%), Positives = 258/563 (45%), Gaps = 24/563 (4%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ------VDNSYAAVLID 59
             F+AI LS +I+  +Q F+V P   +     +  Q     NQ         +       
Sbjct: 5   RAFLAIVLSFLILIGYQYFFVKPVPPQPQAPGQATQAASSANQQTAGGAPAAATGIAATP 64

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
                  ++  V +  P     IN +G       L+ Y    + ++  + L+      +A
Sbjct: 65  STVAVDPLAHDVTVDTPLYTAVINEQGGGVKGFVLKSYRSTNAEDAGPMQLIIGKGPADA 124

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
                        +    ++     ++ +  T T  +          +        + YL
Sbjct: 125 PVLFSLDNGAGTVLPTYTADKNAVTLTNQGDTGTLTMT-AALADGIAIVRTLTFRGDSYL 183

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
             +   V+N +   ++ SP   ++      A+ T        A   ++ LVE K   + +
Sbjct: 184 INVEYKVSNTTDRPVQVSPALTMVNEPFAHASETSKYLFAGPAAYVNEKLVETKAKKLTE 243

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
           + +       SW G  D Y+ +   P+                 + +   S    TI P 
Sbjct: 244 APVVL-QGKVSWTGYVDNYFMTTVAPAVGNGRTITL---QGSEQQVRTVLSEGIQTIGPH 299

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359
           +  +    L+ G K+   +     D         +D+GWF  +AKPM  L+++F+    N
Sbjct: 300 EGKSFAYTLYFGPKKLQVLQTAGSD-----LAKAVDFGWFDVLAKPMLWLLNFFHQFSHN 354

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +G+AI+L T+ +KL+F+P+ +K   S  NM+ +QPKI +LRE+FK  P ++  + M+ LY
Sbjct: 355 YGVAIILLTILIKLIFWPITQKGMKSMKNMQKLQPKIAKLRERFKDDPAKM-NQEMMTLY 413

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           KT+ +NP+ GC P+L+QIP FFA+Y+V+  ++E+RHAPF  WI DL+A D   I      
Sbjct: 414 KTYKVNPVGGCLPMLIQIPFFFALYRVLMAAIELRHAPFMLWINDLSAPDRLWIG----- 468

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539
             F +P    + I  ++M  SM++Q KM+P  AD  QA I+ ++P+VF F   +F +GL+
Sbjct: 469 --FDIPYLHGIPILTLLMGASMYLQQKMTPTTADPTQARIMQFLPIVFTFMFINFASGLV 526

Query: 540 IYWSWSNVISIVQQAVIMKMHGA 562
           +YW  +N++SI+QQ +I + + A
Sbjct: 527 LYWFVNNLLSILQQYLINRQNKA 549


>gi|319765065|ref|YP_004129002.1| membrane protein insertase, yidc/oxa1 family domain containing
           [Alicycliphilus denitrificans BC]
 gi|330827257|ref|YP_004390560.1| membrane protein insertase, YidC/Oxa1 family domain-containing
           [Alicycliphilus denitrificans K601]
 gi|317119626|gb|ADV02115.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Alicycliphilus denitrificans BC]
 gi|329312629|gb|AEB87044.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Alicycliphilus denitrificans K601]
          Length = 564

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 135/587 (22%), Positives = 231/587 (39%), Gaps = 50/587 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNERKNIQT-------V 43
           M       + +     +V  W            F+  P  +  +               V
Sbjct: 1   MNDIRRTILWVIFGFSMVLLWDKWQIHNGNKATFFPTPPAQTASAPAVAASAAGAASVPV 60

Query: 44  KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
                   +           A +   RV +    L  + +  G       L  Y      
Sbjct: 61  ASSAAPGAAAQPPAGSPVQPAATPRERVTVSTDVLRLAFDTDGGSLVQGELLKYPEMGDK 120

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN- 162
             P   LL   +    Y A+   +  A          V      K       ++    + 
Sbjct: 121 AKPF--LLLDESADRVYVAQTGLIGGAFPTHKTPMALVPGPRELKDGENELQVRFESPDL 178

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGF 220
               L +  +     Y   +   V N     +      +++R    P   ++ +    G 
Sbjct: 179 GGVKLVKTWMLKRGAYDIAVRHEVVNTGTAPVSPQLYLQLVRDGNKPAGESSFYSTFTGP 238

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                 K   + ++ DIE         S N ++ +   Y+A+ ++ +      +  + + 
Sbjct: 239 AVYTEAKKYHKVEFKDIESGKAEIDKSSTNGYVAMVQHYFATAWLLADGVQRDNFVRKVD 298

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
                Y     A    I PG+S +    LFAG +    +         P  E++ D+GW 
Sbjct: 299 AN--LYSVGMIAQLGEIAPGQSKSMDARLFAGPQIETLLEKLA-----PGLELVKDYGWL 351

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             +AKP++ L+   + ++ N+G +I+   V +K+ F+ L  K Y S A MK I P+I E+
Sbjct: 352 TILAKPLYWLLDQLHKVIANWGWSIVALVVLLKIAFYWLNAKAYASMAKMKAINPRIQEM 411

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           RE+ K   PQ +Q+ M+++Y+   +NP+ GC PI++QIPVF A+Y V+  S+EMR AP+ 
Sbjct: 412 RERLKD-KPQQMQQEMMRIYREEKVNPMGGCLPIMIQIPVFIALYWVLLSSVEMRGAPWI 470

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
           GWI DL++ DP                     I P++M+ S  +Q  ++P P D  QA +
Sbjct: 471 GWIHDLSSPDPFF-------------------ILPLLMTASSLLQTALNPAPPDPMQAKM 511

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           +  MP++F      FPAGL++YW  +N++SI QQ +I K  G     
Sbjct: 512 MWLMPLMFSVMFFFFPAGLVLYWLTNNILSIAQQWIINKRMGVPPQF 558


>gi|123444346|ref|YP_001008311.1| putative inner membrane protein translocase component YidC
           [Yersinia enterocolitica subsp. enterocolitica 8081]
 gi|122091307|emb|CAL14193.1| probable membrane protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 548

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 136/571 (23%), Positives = 241/571 (42%), Gaps = 52/571 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ + V    +      +        ++   +        
Sbjct: 1   MDSQRNLLL-IALLFVSFMIWQAWQVDNNPQPAAQTTQQTANTATGDKASQAVPGS---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +K   L  +IN +G   +  NL  Y   + S+     L   +     Y
Sbjct: 56  -----GQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+      +      N       +               I L F   +  +F +T  L 
Sbjct: 109 QAQSGLTGKSGPDNPANGERPLFEVPQTSFVLADGQDELRIPLTFTGKDGSVFTKTFVLK 168

Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
            +     +   + N S   +  +  G++ +         T +N F +     A       
Sbjct: 169 RNDYAIGVDYHIKNASAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDET 228

Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             +KY     +    +      W+ +  +Y+A+ +IP+      + F     G+      
Sbjct: 229 KYKKYSFSDIEDKSLDITTKGGWVAMLQQYFATAWIPAANE--TNTFYSADLGNGLAAIG 286

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
           F    + I PG+       L+ G +    +         P  ++ +D+GW +FI++P+F 
Sbjct: 287 FKGAPVVIQPGEQKQLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFK 341

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      
Sbjct: 342 LLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK- 400

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q + + M+ LYK   +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A 
Sbjct: 401 QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQ 460

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527
           DP                     I PI+M ++M+   KMSP    D  Q  I+ +MPV+F
Sbjct: 461 DPYY-------------------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIF 501

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                 FPAGL++Y+  SN+++I+QQ +I +
Sbjct: 502 TVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 532


>gi|54295839|ref|YP_128254.1| hypothetical protein lpl2930 [Legionella pneumophila str. Lens]
 gi|81679103|sp|Q5WSE9|OXAA_LEGPL RecName: Full=Inner membrane protein oxaA
 gi|53755671|emb|CAH17174.1| hypothetical protein lpl2930 [Legionella pneumophila str. Lens]
          Length = 556

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 136/579 (23%), Positives = 253/579 (43%), Gaps = 41/579 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-----PNQVDNSYAAV 56
                  + +AL++I +  W  + +    ++   E+   Q              N+   V
Sbjct: 1   MDIRRIVLYMALALIGLSLWNAWQIDYPAKQPVEEKTASQLTSDGHLLPQIIPSNAEQPV 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
            +    +A S    +++K   L   I+LK        L  Y L V   +    LL    +
Sbjct: 61  TLKAEEKASSGKQLIQVKTDILDVDIDLKNGDIVKGLLLDYPLSVEDKNKPFPLLQNQAS 120

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFERTISL 174
           +        +V      +  + +        ++        + L  K+ + +  ++    
Sbjct: 121 QRYVANSSLFVLDGQTPQSLDFDFTSEKEYYELKPDQNQLIVTLNGKSEDGLDVKKEFVF 180

Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA----VLGDKSL 229
               YL ++   + N      +     +++R  P+   ++      +        G    
Sbjct: 181 TKGSYLIEVNYKIANIGNSLWKGYFNTQLLRSSPKEDKSSIFHIGSYTGASFSNPGKNRY 240

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
            +  +SD+ KS++        W+ +   Y+ S ++P+ ++               Y    
Sbjct: 241 QKVSFSDMSKSNLD-VDAKGGWIAMQQHYFLSAWVPNADSENKFYTLATDKD---YTIGA 296

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            +  IT+ P +     + L+ G +    +         P  ++ +D+G  +F++  +F L
Sbjct: 297 VSQPITVKPKEDKIVGSKLYIGPEITSVLKGIS-----PSLDLTVDYGILWFLSSLLFSL 351

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           M   Y +VGN+G +I+L TV +KL F+ L+   Y S A+M+ +QPK+  LRE++     +
Sbjct: 352 MKAIYTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAK 411

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + +A ++LYK   +NPL GC PIL+QIPVF A+Y V+  S+E+R APF  WI DLA+AD
Sbjct: 412 -ISQATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASAD 470

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529
           P +                   + P+IM  +M IQ K++P PAD  QA ++ ++P++F  
Sbjct: 471 PYH-------------------VLPLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTG 511

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
              +FP+GL++YW  +N +SI+QQ  I + +  E     
Sbjct: 512 LFWNFPSGLVLYWIVNNTLSILQQWYITRKYSDEKPAKK 550


>gi|253702733|ref|YP_003023922.1| hypothetical protein GM21_4149 [Geobacter sp. M21]
 gi|259515695|sp|C6DYS1|OXAA_GEOSM RecName: Full=Inner membrane protein oxaA
 gi|251777583|gb|ACT20164.1| 60 kDa inner membrane insertion protein [Geobacter sp. M21]
          Length = 536

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 143/567 (25%), Positives = 243/567 (42%), Gaps = 43/567 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME      +A+ LS+ ++YA+   +  P+       ++   +         +   +    
Sbjct: 1   ME--KRLIIAVVLSIGVLYAYSFIFPTPKPVPTPGGKQAAMSSATAPAPSVAALPIAGTT 58

Query: 61  RAQALSM--------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
              A +         +  V +         + +G       L+ Y          + L++
Sbjct: 59  PVAAPAPQAGQAPAVAKDVTVDTDLYTAVFSTQGGGLKKFVLKKYKETAGPQGKDIVLVN 118

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
                N Y    D      +     S +               ++L    +  I F +  
Sbjct: 119 -ETAANRYALLSDSREFGISPNALYSAS--TGEVKVTDGGKGSLELTTTTSQGITFRKVY 175

Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
           +   + Y   + + V N     +  +                         +   K  V+
Sbjct: 176 TFSGDAYRIGLTEEVQNVGNVALTGAVHLLQTSRVVDAKKEGRYEVYSPSTLAEGK--VK 233

Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
               +  + +   + +  +W   +DKY+    I  K +   SQ +     +       ++
Sbjct: 234 LDDLEDLQKTPVQYGKDIAWSAFADKYFVDGIIADKGS--ISQVRITRPANDAILRDVAS 291

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
             +++ PG+       ++ G K+   +          RFE +ID+GWF  IAKP+   + 
Sbjct: 292 PTVSVAPGQRSAINYAIYYGPKDLDILKLQGS-----RFEEVIDYGWFGPIAKPLIYSLK 346

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           + Y   GN+GIAI++ T  +KL+FFPL  K Y S  +M+ +QPK+ EL+EKFK      +
Sbjct: 347 FLYKYTGNYGIAIIIITFILKLVFFPLTHKSYKSMKDMQKLQPKMTELKEKFKNDRD-AM 405

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
            +A+++LYKTH +NPL GC P+L+QIPVFF +Y+ +  S+E+RHAPF+ WI DL+A DP 
Sbjct: 406 NRAVMELYKTHKVNPLGGCLPMLVQIPVFFGLYRALMYSIELRHAPFYLWITDLSAKDPY 465

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531
                               + PIIM  +MFIQ KM+P   D  QA ++  +P+VF F  
Sbjct: 466 Y-------------------VTPIIMGATMFIQQKMTPTNMDPVQAKMMLMLPIVFTFMF 506

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558
            +FP+GL+IYW  +NV++I QQ  I K
Sbjct: 507 LNFPSGLVIYWLVNNVLTIAQQMYINK 533


>gi|170729247|ref|YP_001763273.1| 60 kDa inner membrane insertion protein [Shewanella woodyi ATCC
           51908]
 gi|254778163|sp|B1KQ65|OXAA_SHEWM RecName: Full=Inner membrane protein oxaA
 gi|169814594|gb|ACA89178.1| 60 kDa inner membrane insertion protein [Shewanella woodyi ATCC
           51908]
          Length = 544

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 139/565 (24%), Positives = 243/565 (43%), Gaps = 38/565 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N  + I L  +    WQ +      + +  +  ++ T    +   +S        
Sbjct: 1   MESQRN-ILLIGLLFVSFLLWQQWQTDQAPQPVATQSSSVVTASSASDSHSSDVPDADSA 59

Query: 61  -RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A  ++    + +    LI  IN  G       L  + L++ ++ P V L   ++    
Sbjct: 60  LPAAVVASKDLITVNTDQLIIKINPVGGDIVYSALVEHKLELENDEPFVLLEQTNDIN-- 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD 175
           Y A+   +              ++  S          T  + L +   N   + +     
Sbjct: 118 YIAQSGLIGRDGIDSSVKGRAHFDSASRNYSLAAGQDTLEVPLTYVAENGATYTKMFIFH 177

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
              +   +   + N +  Q++    G+I     ++ ++         A     +  E+  
Sbjct: 178 RGKFDVDVDYVIDNKTDKQLQVQMYGQIKHSIKKSESSMMMPTYRGAAFSTQDTRYEKYS 237

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
            +       +      W  +   Y+ S ++P             + G A     F     
Sbjct: 238 FEDMADKNLDKKTLGGWAAMLQHYFVSAWVPPANDQNIIFSSISAGGQAN--IGFRGAIF 295

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
            + PG +   T+  + G K+   +         P   +++D+G+ +++A P++ L+ +F 
Sbjct: 296 DVAPGATQEITSQFYVGPKDQAALSAIS-----PTLNLVVDYGFLWWLAVPIYKLLMFFQ 350

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++VGN+G AI+L T+ V+ L +PL K QY S A M+N+QPK+ E++E+F     Q + +A
Sbjct: 351 SIVGNWGAAIILITLTVRGLLYPLTKAQYTSMAKMRNLQPKLAEMKERFGD-DRQKMGQA 409

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NP+ GC PILLQ+P+F A+Y V+  S+E+RHAPF  WI DL+  DP    
Sbjct: 410 MMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQDPYY-- 467

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALS 532
                            + PI+M +SMF+  KM P  P  D  Q  ++ WMPVVF     
Sbjct: 468 -----------------VMPILMGVSMFVMQKMQPMAPTMDPMQVKMMQWMPVVFTVFFL 510

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIM 557
            FPAGL++YW   N+++I QQ  I 
Sbjct: 511 WFPAGLVLYWLVGNLVAIAQQKYIY 535


>gi|117927031|ref|YP_867648.1| protein translocase subunit yidC [Magnetococcus sp. MC-1]
 gi|166975874|sp|A0LE49|OXAA_MAGSM RecName: Full=Inner membrane protein oxaA
 gi|117610787|gb|ABK46242.1| protein translocase subunit yidC [Magnetococcus sp. MC-1]
          Length = 556

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 176/587 (29%), Positives = 282/587 (48%), Gaps = 55/587 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYV--YPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+       AI LS +++ A+Q +    YP  E    + ++ ++         +  A  +
Sbjct: 1   MD--RRTLTAIVLSFVLLTAFQFYMAWKYPPAELTGEQVQSGESSAPAPLASTAPVADAL 58

Query: 59  DDRAQALSMSP----------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
               + ++ S                  +  KN  + GS++L+G +   ++   +   + 
Sbjct: 59  PPPVEGMAGSAPQQAMSQPLINTDAKSLLHFKNDLVEGSLSLQGGRLVGMDFLQHTDVLG 118

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
                ++ +  S  ++ Y          + I+ P++NT W LI  + L      KLV+ N
Sbjct: 119 G--KPISFMGISQVESFYQESGFLPVAGSAIKAPDANTQWQLIGKESLQGAGEFKLVWDN 176

Query: 163 ANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
              I+FE+  S     YLFK+ D + NNS   +      +  R     + +   + +   
Sbjct: 177 GEGIVFEKLFSFAQGSYLFKVEDRLINNSAAALGVYHYSQFKRIPVINSQSMLAMSDFQG 236

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI----PSKETSFHSQFKY 277
            +        Q   +   +          W G SDKY+ +  +    P +       F Y
Sbjct: 237 PMAYLNGERYQHSYEDLTAQDLREKGHGGWTGFSDKYFLAAMVAKPLPPEAQPRRYYFDY 296

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337
                  Y+     N + I  G+S+     LF G KE  T+            E  ID+G
Sbjct: 297 DRPN---YRVGMVENSVIIPAGQSLAVDYDLFIGPKEISTLERSNLS-----LERSIDYG 348

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           WF+F+A+P+  ++++F ++V N+G+AI+L T+ +KLLFFPLA K Y S   MK +QPKI+
Sbjct: 349 WFHFLAEPLVKVLNFFNSVVHNYGVAIILLTLAIKLLFFPLANKSYRSMNAMKKLQPKIE 408

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           EL+ K   S    + +AM++LY+TH +NPL GC PIL+QIPVFFA+YKV+ +S+EMRHAP
Sbjct: 409 ELK-KLHGSDRNKMNEAMMKLYQTHKVNPLGGCLPILVQIPVFFALYKVLFLSVEMRHAP 467

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           F  WI DL+A DP                     + P++M  SMF+Q K++P P+D  QA
Sbjct: 468 FMLWIPDLSAMDPFY-------------------VLPLLMGGSMFLQSKLNPTPSDPMQA 508

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            I+ ++PV+F     SFP+GL++YW  +NV+SI QQ  IMK    E 
Sbjct: 509 KIMMFLPVIFTVMFLSFPSGLVLYWLVNNVLSISQQYYIMKKMEHEP 555


>gi|300692995|ref|YP_003753990.1| cytoplasmic insertase, essential for proper integration of ATPase
           into the membrane [Ralstonia solanacearum PSI07]
 gi|299080055|emb|CBJ52730.1| cytoplasmic insertase, essential for proper integration of ATPase
           into the membrane [Ralstonia solanacearum PSI07]
          Length = 554

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 153/578 (26%), Positives = 247/578 (42%), Gaps = 50/578 (8%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVD 50
           M+      + +  S+ +V     WQ        F+  P+    +             +  
Sbjct: 1   MDI-KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTATTSAAAPGGTPAGDVPKSA 59

Query: 51  NSYAAVLIDD-----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
            + AA           A     + ++ +    +  +++  GA    L L         + 
Sbjct: 60  AAPAAAGSQAAPATGAASQTPAAEKIVVTTDVIRATVDTAGAILTKLELLTQK---DHDG 116

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             V L    + +  Y A    +   +        T               + L       
Sbjct: 117 NPVVLF-DRSLERTYLARSGLIG-GDFPNHTTVFTASAGPRDLGTGGEVSLTLTADKGGA 174

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVL 224
            L +  +     Y+      VTN+    I  +    + R       +  +    G     
Sbjct: 175 KLAKTYVFKRGSYVIDTRFDVTNDGTAPISPTLYMELARDGGSVEQSRFYSTFTGPAVYT 234

Query: 225 GDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
                 +  +SDI+K          N W+G+   Y+AS +IP+       +F        
Sbjct: 235 DADKFHKINFSDIDKGKAHVPAATDNGWVGMVQHYFASAWIPAASA--KREFYVDRVDTN 292

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            Y+        T+ PG +I+ T  LFAG +E   +         P  E++ D+GW   IA
Sbjct: 293 FYRIGIQEPLGTVAPGANISATARLFAGPQEERMLEGIT-----PGLELVKDYGWLTIIA 347

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP+F L+   + L+GN+G +I+  TV VKL+FFPL+   Y S A MK++QP++  +RE+ 
Sbjct: 348 KPLFWLLEKIHLLLGNWGWSIVGLTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERH 407

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
           K   PQ + + M+QLY+T  +NPL GC PI++QIPVF A+Y V+  S+EMR AP+ GW+ 
Sbjct: 408 KG-DPQKMNQEMMQLYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWVH 466

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DLA+ DP                     I PI+M++SMF+Q +++P P D  QA ++ +M
Sbjct: 467 DLASPDPFY-------------------ILPILMAVSMFVQTRLNPTPPDPVQAKMMMFM 507

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           P+ F      FPAGL++YW  +N +SI QQ  I +M G
Sbjct: 508 PIAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 545


>gi|307253082|ref|ZP_07534965.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307264104|ref|ZP_07545701.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|306859451|gb|EFM91481.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306870582|gb|EFN02329.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 533

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 138/554 (24%), Positives = 252/554 (45%), Gaps = 32/554 (5%)

Query: 11  IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPR 70
           + +S +I   WQ  +     E    ++   Q        D   A+      A+  +    
Sbjct: 4   LLVSFLIFTQWQQDFNP---EIQAQKQAQQQAQVASQSGDVPAASNANTVIAENATQGKT 60

Query: 71  VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130
           V L++  L  +I+  G      +L  ++ +++S +P   L + + T  A    +      
Sbjct: 61  VTLESDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATTYVAQSGLVGKNGID 120

Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190
            N   P      +            + + F+    +  +  +     Y   +   V N +
Sbjct: 121 TNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFVLKRGSYDVAVNFNVKNQT 180

Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250
              +   P G+I     +++ +         A    ++  ++      + +  + +    
Sbjct: 181 AATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDMEKANLDINTKAG 240

Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310
           W+ +   Y+ S ++P+++       +  +         +     TI P    T T+ L+ 
Sbjct: 241 WVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGPVTTIAPNSEATITSQLWT 297

Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370
           G K+   +     +      ++ +D+GW +FIAKP+F L+++  ++V N+G+AI+  T+ 
Sbjct: 298 GPKDQKEMEATAAN-----LDLTVDYGWAWFIAKPLFALLTFIQSIVTNWGLAIIGVTIV 352

Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430
           VK + +PL K QY S A M+ +QPKI E+RE+F     Q + + M++LYK   +NP+ GC
Sbjct: 353 VKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMSQEMMKLYKEEKVNPMGGC 411

Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
            PIL+Q+P+F A+Y     ++E+RHAPF+GWI+DL+A DP                    
Sbjct: 412 LPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------------------ 453

Query: 491 GIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
            I P++M  SMF+  KMSP P  D  Q  ++ +MPV+F      FP+GL++YW  SN+I+
Sbjct: 454 -ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSGLVLYWLTSNIIT 512

Query: 550 IVQQAVIMKMHGAE 563
           IVQQ +I +    +
Sbjct: 513 IVQQWLIYRNLEKK 526


>gi|186477842|ref|YP_001859312.1| putative inner membrane protein translocase component YidC
           [Burkholderia phymatum STM815]
 gi|254772761|sp|B2JJR8|OXAA_BURP8 RecName: Full=Inner membrane protein oxaA
 gi|184194301|gb|ACC72266.1| 60 kDa inner membrane insertion protein [Burkholderia phymatum
           STM815]
          Length = 550

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 144/577 (24%), Positives = 235/577 (40%), Gaps = 41/577 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV-- 56
           M+        I     ++    WQ  +  P +   +  +        P     +      
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATQTKTAAPAAPGSSTTASQPTDL 60

Query: 57  ------LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
                        A   +  V        G I+ +G     L L         +   V  
Sbjct: 61  PQTTAAAPGSTTPAAQQAQLVSFSTDVYRGQIDTRGGTLSKLTLVKPGEGKQPDQ--VIT 118

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170
           L      + Y A    +             V    +       T      +     + + 
Sbjct: 119 LFDHTADHTYLARTGLLGGDFPNHTDVFTPVAGQATDMTGNTLTLSFQSPEKGGLKVVKT 178

Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSL 229
                  Y+  +   + N     ++ +    ++R      T  F     G          
Sbjct: 179 YTFTRGSYVINVDTKIQNVGTAPVKPTAYMELVRDSQPVETPRFSHTFIGPAVYTEQHHF 238

Query: 230 VEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
            +  + DI+K+         N W+ +   Y+AS +IP +        + +      Y+  
Sbjct: 239 QKLTFGDIDKNKQDYATSADNGWVAMVQHYFASAWIPQQGAKRDIYVEKIDPS--LYRVG 296

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                 TI PG++I  +  LFAG +E   +         P  E++ D+GW   IAKP+F 
Sbjct: 297 VKQPLQTIAPGQTIDVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFW 351

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+   +  VGN+G AI+L T+ +K +FFPL+   Y S A MK I P++  LRE+F +S P
Sbjct: 352 LLEKIHGYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDP 410

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+  
Sbjct: 411 QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQ 470

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP                     I P++M++SMF+Q K++P P D  QA ++ +MP+ F 
Sbjct: 471 DPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFS 511

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
                FPAGL++Y+  +NV+SI QQ  I +M G +  
Sbjct: 512 VMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGQKKK 548


>gi|157156055|ref|YP_001465190.1| putative inner membrane protein translocase component YidC
           [Escherichia coli E24377A]
 gi|166975860|sp|A7ZTR1|OXAA_ECO24 RecName: Full=Inner membrane protein oxaA
 gi|157078085|gb|ABV17793.1| inner membrane protein OxaA [Escherichia coli E24377A]
          Length = 548

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++++  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSSQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|88798542|ref|ZP_01114126.1| putative inner membrane protein translocase component YidC
           [Reinekea sp. MED297]
 gi|88778642|gb|EAR09833.1| putative inner membrane protein translocase component YidC
           [Reinekea sp. MED297]
          Length = 559

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 142/574 (24%), Positives = 246/574 (42%), Gaps = 44/574 (7%)

Query: 1   MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMN--------NERKNIQTVKQPNQVD 50
           M+      +A    +S I++  W N Y                 N    + +       D
Sbjct: 1   MDVRRIALIAGLAIVSYIMILQWSNDYSQTNPVNTADAVIAGDLNSDNAVASEVPTGNPD 60

Query: 51  NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
            +         A +      + ++  +L   I+L G       L  Y   + + +    +
Sbjct: 61  VANDTQAGQAPATSQVNGDVISVRTDTLDVRISLDGGDVIYTALPEYPYSLETPNIPFRM 120

Query: 111 LSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
              +NT   Y A+   V     + +     +               + L  +  N ++  
Sbjct: 121 F-ENNTTRTYIAQSGLVGEDGIDRQSRARFSAEQSTYELGDADQLEVVLTHEADNGLVVN 179

Query: 170 RTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLG 225
           +  + +   Y+  +   +TN   D +R +  G++ R +   P   +              
Sbjct: 180 KVYTFNRGAYVMDVRFDLTNQGSDTLRTNLFGQLRRDRSQDPSAGSGIGMRSYLGATFST 239

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           + S  E+           N  +   W+ +   Y+ S +IPS   +    F         Y
Sbjct: 240 EDSAYEKVKFGELDDGRFNGSKVGGWVAMLQHYFLSAWIPSANDNNA--FYGQKGSTGDY 297

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
              F A  + + PG+S++T   L+ G K+   +     +      E  +D+GW ++IA+P
Sbjct: 298 YVGFQAPTVVVGPGESVSTGAQLYVGPKDQDQLDELADN-----LEKTVDYGWLWWIAQP 352

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F LM + + L+GN+G +I+L T+ VK++ +PL    Y S   M+   P I ELRE++  
Sbjct: 353 LFWLMQFIHGLIGNWGWSIVLMTLTVKMVLYPLTASSYRSMGKMRKFAPVISELREQYGD 412

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q + + M++LY+   +NPL GC P+L+Q+PVF A+Y V+  S+E+R +PF  WI+DL
Sbjct: 413 -DRQKMSQEMMKLYQKEKLNPLGGCLPMLVQMPVFIALYWVLMESVELRQSPFIFWIQDL 471

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524
           +  DP                     + P++M  SMF+QM+M   P  D  Q  I+ +MP
Sbjct: 472 SLKDPFF-------------------VLPLLMGASMFLQMRMQQQPTMDPMQQKIMQFMP 512

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           V+F F    FPAGL +YW  +NVI+IVQQ ++ K
Sbjct: 513 VMFTFMFLWFPAGLTLYWFTNNVITIVQQYIVNK 546


>gi|320539850|ref|ZP_08039509.1| putative cytoplasmic insertase into membrane protein, Sec system
           [Serratia symbiotica str. Tucson]
 gi|320030036|gb|EFW12056.1| putative cytoplasmic insertase into membrane protein, Sec system
           [Serratia symbiotica str. Tucson]
          Length = 545

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 137/570 (24%), Positives = 245/570 (42%), Gaps = 52/570 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +           +     T +   Q  N+ A      
Sbjct: 1   MDSQRNLLL-IALLFVSFMIWQAW---------QADNAPQPTAQTTQQTSNATADDAARQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                +    + +    L  +IN +G   +   L  Y   + S+ P   L   +     Y
Sbjct: 51  DGPVSAQGKLITVNTDVLSLTINTRGGDIEQAKLLAYPETLGSSLPFQLL--ETTPSFVY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175
            A+             N        +    T         I L F + +  ++ +T  L 
Sbjct: 109 QAQSGLTGKNGPDNPANGERPLYQAAQDSYTLPEGQDELRIPLSFTSKDGTIYTKTFVLK 168

Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
            ++    +   + N S   +  +  G++ +         T +N F +     A       
Sbjct: 169 RNHYAVSVDYYIDNKSTTPLELTLFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSSSED 228

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
             QKY+  +K    N      W+ +  +Y+A+ ++P+  T   + F   + G       F
Sbjct: 229 KYQKYA-FDKDEKLNVTTQGGWIAMLQQYFATAWVPA--TQGSNTFYTANPGDNLSTIGF 285

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            +  + + P         L+ G +    +            ++ +D+GW +FI++P+F L
Sbjct: 286 KSTPVVVQPSTQQQLNATLWVGPELQDQMAQLAA-----HLDLTVDYGWLWFISQPLFKL 340

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + + +  +GN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q
Sbjct: 341 LKFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKMQAMRERIGDDK-Q 399

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + + M+ LYK+  +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A D
Sbjct: 400 RMSQEMMALYKSEKVNPLGGCLPLIVQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528
           P                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+F 
Sbjct: 460 PYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFT 500

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 501 VFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 530


>gi|16131573|ref|NP_418161.1| membrane protein insertase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89110307|ref|AP_004087.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli str. K-12 substr. W3110]
 gi|170083207|ref|YP_001732527.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli str. K-12 substr. DH10B]
 gi|188495796|ref|ZP_03003066.1| membrane protein OxaA [Escherichia coli 53638]
 gi|191165799|ref|ZP_03027637.1| inner membrane protein OxaA [Escherichia coli B7A]
 gi|238902796|ref|YP_002928592.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli BW2952]
 gi|254038924|ref|ZP_04872976.1| inner membrane protein oxaA [Escherichia sp. 1_1_43]
 gi|256025563|ref|ZP_05439428.1| putative inner membrane protein translocase component YidC
           [Escherichia sp. 4_1_40B]
 gi|300917465|ref|ZP_07134125.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 115-1]
 gi|300947533|ref|ZP_07161710.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 116-1]
 gi|300956289|ref|ZP_07168591.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 175-1]
 gi|301028499|ref|ZP_07191739.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 196-1]
 gi|301644378|ref|ZP_07244379.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 146-1]
 gi|307140406|ref|ZP_07499762.1| putative inner membrane protein translocase component YidC
           [Escherichia coli H736]
 gi|309795745|ref|ZP_07690160.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 145-7]
 gi|331644430|ref|ZP_08345559.1| inner membrane protein OxaA [Escherichia coli H736]
 gi|331655367|ref|ZP_08356366.1| inner membrane protein OxaA [Escherichia coli M718]
 gi|398974|sp|P25714|OXAA_ECOLI RecName: Full=Inner membrane protein oxaA
 gi|254772780|sp|B1X9T4|OXAA_ECODH RecName: Full=Inner membrane protein oxaA
 gi|259515689|sp|C4ZYY3|OXAA_ECOBW RecName: Full=Inner membrane protein oxaA
 gi|290553|gb|AAA62056.1| 60 kD protein [Escherichia coli]
 gi|1790140|gb|AAC76728.1| membrane protein insertase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|85676338|dbj|BAE77588.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli str. K12 substr. W3110]
 gi|169891042|gb|ACB04749.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli str. K-12 substr. DH10B]
 gi|188490995|gb|EDU66098.1| membrane protein OxaA [Escherichia coli 53638]
 gi|190904123|gb|EDV63834.1| inner membrane protein OxaA [Escherichia coli B7A]
 gi|226838889|gb|EEH70916.1| inner membrane protein oxaA [Escherichia sp. 1_1_43]
 gi|238860712|gb|ACR62710.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli BW2952]
 gi|260451437|gb|ACX41859.1| YidC translocase/secretase [Escherichia coli DH1]
 gi|299878461|gb|EFI86672.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 196-1]
 gi|300316876|gb|EFJ66660.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 175-1]
 gi|300415269|gb|EFJ98579.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 115-1]
 gi|300452870|gb|EFK16490.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 116-1]
 gi|301077319|gb|EFK92125.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 146-1]
 gi|308120624|gb|EFO57886.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 145-7]
 gi|309704153|emb|CBJ03500.1| inner membrane protein [Escherichia coli ETEC H10407]
 gi|315138290|dbj|BAJ45449.1| putative inner membrane protein translocase component [Escherichia
           coli DH1]
 gi|323934943|gb|EGB31321.1| membrane protein insertase [Escherichia coli E1520]
 gi|331036724|gb|EGI08950.1| inner membrane protein OxaA [Escherichia coli H736]
 gi|331047382|gb|EGI19460.1| inner membrane protein OxaA [Escherichia coli M718]
          Length = 548

 Score =  333 bits (853), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|56480409|ref|NP_709495.2| putative inner membrane protein translocase component YidC
           [Shigella flexneri 2a str. 301]
 gi|33300911|sp|P59783|OXAA_SHIFL RecName: Full=Inner membrane protein oxaA
 gi|56383960|gb|AAN45202.2| 60 KD inner-membrane protein [Shigella flexneri 2a str. 301]
 gi|281603068|gb|ADA76052.1| Inner membrane protein oxaA [Shigella flexneri 2002017]
 gi|332750526|gb|EGJ80935.1| inner membrane protein oxaA [Shigella flexneri K-671]
 gi|332751712|gb|EGJ82110.1| inner membrane protein oxaA [Shigella flexneri 2747-71]
          Length = 548

 Score =  333 bits (853), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|322835122|ref|YP_004215149.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Rahnella sp. Y9602]
 gi|321170323|gb|ADW76022.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Rahnella sp. Y9602]
          Length = 544

 Score =  333 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 138/570 (24%), Positives = 247/570 (43%), Gaps = 53/570 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N F+ IAL  +    WQ +      +  N   +        +  + +        
Sbjct: 1   MDSQRNLFL-IALLFVSFMIWQAWQTDHAPQPANQTTQQTANTANGDATNQAVPDS---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + + +  L  +IN +G   +   L+ Y   + S+ P   L   +     Y
Sbjct: 56  -----GQGKLITVNSDVLSLTINTRGGDIEQALLKAYPTTLGSDQPFQLL--ETTPNFLY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175
            A+             N        S    T         I + +  AN  ++ +T  + 
Sbjct: 109 QAQSGLTGKNGPDNPANGERPLFKASSDTFTMAEGQSELRIPMTYTAANGAIYTKTFVIK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
              Y   +   + N +   +  +  G++ +         T +N F +     A       
Sbjct: 169 RGSYAVNVEYNINNTTAAPLELTMFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSSSDD 228

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
             QKY+  +KS   N      W+ +  +Y+A+ +IPS + +        +  +      F
Sbjct: 229 KYQKYA-FDKSEALNVTTQGGWVAMLQQYFATAWIPSAKDTNTFF---TTTNNGISTIGF 284

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
                T+ PG      + L+ G +    +         P  ++ +D+GW +FI++P+F L
Sbjct: 285 KGTPFTVAPGAQQQVASILWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFKL 339

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + +    VGN+G +I++ T  V+ + +PL + QY S A M+ +QPK+  +RE+      Q
Sbjct: 340 LKFIQGFVGNWGFSIIVITFIVRGIMYPLTRAQYTSMAKMRMLQPKLAAMRERIGDDK-Q 398

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + + M+ LYK+  +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF  WI DL+A D
Sbjct: 399 RMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLSGSIELRHAPFILWIHDLSAQD 458

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528
           P                     I P++M ++MF   KMSP    D  Q  I+ +MPV+F 
Sbjct: 459 PYY-------------------ILPVLMGITMFFIQKMSPTTVTDPMQQKIMTFMPVIFT 499

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 500 VFFLWFPSGLVVYYIVSNLVTILQQQLIYR 529


>gi|94263631|ref|ZP_01287440.1| 60 kDa inner membrane insertion protein [delta proteobacterium
           MLMS-1]
 gi|93455936|gb|EAT06091.1| 60 kDa inner membrane insertion protein [delta proteobacterium
           MLMS-1]
          Length = 559

 Score =  333 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 150/573 (26%), Positives = 271/573 (47%), Gaps = 33/573 (5%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN--IQTVKQPNQVDN-------- 51
             N+   +AI LS+ I+  +Q F++ P  E    E +    +    P             
Sbjct: 1   MNNYRALLAIVLSMAILLVYQFFFMPPPPESTAPEPEAPVAERATAPTAAPERPRPGTTD 60

Query: 52  ---SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
              + A V +            + ++       I+  G       L+ +   V  +SP  
Sbjct: 61  PTGAPAPVDVSSLLAQEVEGREIVVETDLYEAVISEAGGALRSFRLKEFRETVDPDSPAK 120

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
            L+  ++  N       +    +  +L +  +               + L  ++   + F
Sbjct: 121 ELV-RTDHDNGLPLRFSWGVEPHQADLLHYQSERQGRLVVPAGREQTLTLRAQSPLGLEF 179

Query: 169 ERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLG 225
            RT +  +  +L ++ + V N     ++ +P   +     +   +          +A++ 
Sbjct: 180 IRTYTFRDSDHLLELREEVRNTGEVPLQGAPYLALTSRPFEAEDDPLKRFLFDGPVALVD 239

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
            +    +    +E+ S  +F    SW G  D Y+ +  IP ++    + F   ++     
Sbjct: 240 GEVHEVRPRDLVEERSGRSFTGEVSWAGYHDSYFLAAIIPREQGQATAHFS--ANREETA 297

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
               ++    + PG++ +    ++ G K+   ++    D         +++GWF F+A+P
Sbjct: 298 TTVLASAAEVLNPGEARSYEYMVYYGPKKLAELNAIGYD-----LGRSVNFGWFDFLARP 352

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
            F ++S+F+ +VGN+G+AI++ T+ +K+LF+PL  K   S   M+ IQP++ +LREKFK 
Sbjct: 353 AFYVLSFFHGMVGNYGLAIIMVTILIKILFWPLTHKGLKSMKVMQKIQPRMAKLREKFKD 412

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q  Q+ M++LY+T+ +NPL GC P+LLQIPVFFA+YKV+  S+E+RHAPF  WI DL
Sbjct: 413 DK-QRQQQEMLKLYQTYKVNPLGGCLPMLLQIPVFFALYKVLLQSVELRHAPFMLWINDL 471

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525
           +A D   I        F +P    + +  ++M+ SMFIQ KM+P  AD  QA I+ ++P+
Sbjct: 472 SAPDRLYIG-------FDIPWLGGIPVLTLLMAASMFIQQKMTPI-ADPMQARIMLFLPL 523

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           VF F   +F +GL++YW  +NV++I QQ  I +
Sbjct: 524 VFFFLFLNFASGLVLYWFINNVLTIAQQYTIYR 556


>gi|170766557|ref|ZP_02901010.1| inner membrane protein OxaA [Escherichia albertii TW07627]
 gi|170123995|gb|EDS92926.1| inner membrane protein OxaA [Escherichia albertii TW07627]
          Length = 548

 Score =  333 bits (852), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLADGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP-----QTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSINLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|15804299|ref|NP_290338.1| putative inner membrane protein translocase component YidC
           [Escherichia coli O157:H7 EDL933]
 gi|15833894|ref|NP_312667.1| inner membrane protein translocase component YidC [Escherichia coli
           O157:H7 str. Sakai]
 gi|26250446|ref|NP_756486.1| putative inner membrane protein translocase component YidC
           [Escherichia coli CFT073]
 gi|74314020|ref|YP_312439.1| putative inner membrane protein translocase component YidC
           [Shigella sonnei Ss046]
 gi|91213230|ref|YP_543216.1| putative inner membrane protein translocase component YidC
           [Escherichia coli UTI89]
 gi|110644048|ref|YP_671778.1| putative inner membrane protein translocase component YidC
           [Escherichia coli 536]
 gi|117625980|ref|YP_859303.1| putative inner membrane protein translocase component YidC
           [Escherichia coli APEC O1]
 gi|157163186|ref|YP_001460504.1| putative inner membrane protein translocase component YidC
           [Escherichia coli HS]
 gi|168748575|ref|ZP_02773597.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4113]
 gi|168753598|ref|ZP_02778605.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4401]
 gi|168759895|ref|ZP_02784902.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4501]
 gi|168766196|ref|ZP_02791203.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4486]
 gi|168772256|ref|ZP_02797263.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4196]
 gi|168779931|ref|ZP_02804938.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4076]
 gi|168786539|ref|ZP_02811546.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC869]
 gi|168798744|ref|ZP_02823751.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC508]
 gi|170022258|ref|YP_001727212.1| putative inner membrane protein translocase component YidC
           [Escherichia coli ATCC 8739]
 gi|170680368|ref|YP_001746035.1| putative inner membrane protein translocase component YidC
           [Escherichia coli SMS-3-5]
 gi|191170354|ref|ZP_03031907.1| inner membrane protein OxaA [Escherichia coli F11]
 gi|195936328|ref|ZP_03081710.1| putative inner membrane protein translocase component YidC
           [Escherichia coli O157:H7 str. EC4024]
 gi|208806756|ref|ZP_03249093.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4206]
 gi|208813372|ref|ZP_03254701.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4045]
 gi|208818916|ref|ZP_03259236.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4042]
 gi|209400160|ref|YP_002273233.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4115]
 gi|209921182|ref|YP_002295266.1| putative inner membrane protein translocase component YidC
           [Escherichia coli SE11]
 gi|215489045|ref|YP_002331476.1| putative inner membrane protein translocase component YidC
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217325489|ref|ZP_03441573.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. TW14588]
 gi|218556272|ref|YP_002389186.1| putative inner membrane protein translocase component YidC
           [Escherichia coli IAI1]
 gi|218560781|ref|YP_002393694.1| inner membrane protein translocase component YidC [Escherichia coli
           S88]
 gi|218691994|ref|YP_002400206.1| putative inner membrane protein translocase component YidC
           [Escherichia coli ED1a]
 gi|218697428|ref|YP_002405095.1| putative inner membrane protein translocase component YidC
           [Escherichia coli 55989]
 gi|218702555|ref|YP_002410184.1| putative inner membrane protein translocase component YidC
           [Escherichia coli IAI39]
 gi|218707352|ref|YP_002414871.1| putative inner membrane protein translocase component YidC
           [Escherichia coli UMN026]
 gi|227883928|ref|ZP_04001733.1| Oxa1 family cytochrome oxidase biogenesis protein [Escherichia coli
           83972]
 gi|237703507|ref|ZP_04533988.1| inner-membrane protein [Escherichia sp. 3_2_53FAA]
 gi|254795708|ref|YP_003080545.1| putative inner membrane protein translocase component YidC
           [Escherichia coli O157:H7 str. TW14359]
 gi|256021276|ref|ZP_05435141.1| putative inner membrane protein translocase component YidC
           [Shigella sp. D9]
 gi|260846510|ref|YP_003224288.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli O103:H2 str. 12009]
 gi|260857884|ref|YP_003231775.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli O26:H11 str. 11368]
 gi|261225859|ref|ZP_05940140.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258904|ref|ZP_05951437.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291285124|ref|YP_003501942.1| Preprotein translocase subunit YidC [Escherichia coli O55:H7 str.
           CB9615]
 gi|293407345|ref|ZP_06651267.1| inner membrane protein translocase component YidC [Escherichia coli
           FVEC1412]
 gi|293413160|ref|ZP_06655826.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298383086|ref|ZP_06992681.1| inner membrane protein oxaA [Escherichia coli FVEC1302]
 gi|300815047|ref|ZP_07095272.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 107-1]
 gi|300824309|ref|ZP_07104425.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 119-7]
 gi|300896034|ref|ZP_07114595.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 198-1]
 gi|300903018|ref|ZP_07120960.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 84-1]
 gi|300925529|ref|ZP_07141404.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 182-1]
 gi|300940891|ref|ZP_07155418.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 21-1]
 gi|300983658|ref|ZP_07176699.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 200-1]
 gi|300984535|ref|ZP_07177025.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 45-1]
 gi|301020905|ref|ZP_07184960.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 69-1]
 gi|301047525|ref|ZP_07194601.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 185-1]
 gi|301305948|ref|ZP_07212030.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 124-1]
 gi|301325003|ref|ZP_07218553.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 78-1]
 gi|306815941|ref|ZP_07450079.1| putative inner membrane protein translocase component YidC
           [Escherichia coli NC101]
 gi|307313226|ref|ZP_07592851.1| membrane protein insertase [Escherichia coli W]
 gi|312967885|ref|ZP_07782097.1| inner membrane protein oxaA [Escherichia coli 2362-75]
 gi|331649533|ref|ZP_08350619.1| inner membrane protein OxaA [Escherichia coli M605]
 gi|331660049|ref|ZP_08360987.1| inner membrane protein OxaA [Escherichia coli TA206]
 gi|331665356|ref|ZP_08366257.1| inner membrane protein OxaA [Escherichia coli TA143]
 gi|331670550|ref|ZP_08371389.1| inner membrane protein OxaA [Escherichia coli TA271]
 gi|331675197|ref|ZP_08375950.1| inner membrane protein OxaA [Escherichia coli TA280]
 gi|331679804|ref|ZP_08380474.1| inner membrane protein OxaA [Escherichia coli H591]
 gi|331685430|ref|ZP_08386016.1| inner membrane protein OxaA [Escherichia coli H299]
 gi|332282505|ref|ZP_08394918.1| inner-membrane protein [Shigella sp. D9]
 gi|54038803|sp|P65625|OXAA_ECO57 RecName: Full=Inner membrane protein oxaA
 gi|54041692|sp|P65624|OXAA_ECOL6 RecName: Full=Inner membrane protein oxaA
 gi|122421835|sp|Q1R4M9|OXAA_ECOUT RecName: Full=Inner membrane protein oxaA
 gi|122957862|sp|Q0TB02|OXAA_ECOL5 RecName: Full=Inner membrane protein oxaA
 gi|123615901|sp|Q3YWA8|OXAA_SHISS RecName: Full=Inner membrane protein oxaA
 gi|166975861|sp|A8A6G7|OXAA_ECOHS RecName: Full=Inner membrane protein oxaA
 gi|166975862|sp|A1AHN9|OXAA_ECOK1 RecName: Full=Inner membrane protein oxaA
 gi|189036350|sp|B1IX33|OXAA_ECOLC RecName: Full=Inner membrane protein oxaA
 gi|254772773|sp|B7UMH2|OXAA_ECO27 RecName: Full=Inner membrane protein oxaA
 gi|254772774|sp|B7MGC7|OXAA_ECO45 RecName: Full=Inner membrane protein oxaA
 gi|254772775|sp|B7L849|OXAA_ECO55 RecName: Full=Inner membrane protein oxaA
 gi|254772776|sp|B5YXA9|OXAA_ECO5E RecName: Full=Inner membrane protein oxaA
 gi|254772777|sp|B7NR08|OXAA_ECO7I RecName: Full=Inner membrane protein oxaA
 gi|254772778|sp|B7N210|OXAA_ECO81 RecName: Full=Inner membrane protein oxaA
 gi|254772779|sp|B7M558|OXAA_ECO8A RecName: Full=Inner membrane protein oxaA
 gi|254772781|sp|B7NF23|OXAA_ECOLU RecName: Full=Inner membrane protein oxaA
 gi|254772782|sp|B6I3T8|OXAA_ECOSE RecName: Full=Inner membrane protein oxaA
 gi|254772783|sp|B1LL32|OXAA_ECOSM RecName: Full=Inner membrane protein oxaA
 gi|12518544|gb|AAG58902.1|AE005601_8 60 KD inner-membrane protein [Escherichia coli O157:H7 str. EDL933]
 gi|26110876|gb|AAN83060.1|AE016769_175 60 kDa inner-membrane protein [Escherichia coli CFT073]
 gi|13364115|dbj|BAB38063.1| 60 KD inner-membrane protein [Escherichia coli O157:H7 str. Sakai]
 gi|73857497|gb|AAZ90204.1| 60 kDa inner-membrane protein [Shigella sonnei Ss046]
 gi|91074804|gb|ABE09685.1| 60 KD inner-membrane protein [Escherichia coli UTI89]
 gi|110345640|gb|ABG71877.1| 60 kDa inner-membrane protein [Escherichia coli 536]
 gi|115515104|gb|ABJ03179.1| inner membrane protein translocase component YidC [Escherichia coli
           APEC O1]
 gi|157068866|gb|ABV08121.1| inner membrane protein OxaA [Escherichia coli HS]
 gi|169757186|gb|ACA79885.1| 60 kDa inner membrane insertion protein [Escherichia coli ATCC
           8739]
 gi|170518086|gb|ACB16264.1| inner membrane protein OxaA [Escherichia coli SMS-3-5]
 gi|187771700|gb|EDU35544.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4196]
 gi|188016887|gb|EDU55009.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4113]
 gi|189002654|gb|EDU71640.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4076]
 gi|189359277|gb|EDU77696.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4401]
 gi|189364371|gb|EDU82790.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4486]
 gi|189369628|gb|EDU88044.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4501]
 gi|189373378|gb|EDU91794.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC869]
 gi|189378759|gb|EDU97175.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC508]
 gi|190909162|gb|EDV68748.1| inner membrane protein OxaA [Escherichia coli F11]
 gi|208726557|gb|EDZ76158.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4206]
 gi|208734649|gb|EDZ83336.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4045]
 gi|208739039|gb|EDZ86721.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4042]
 gi|209161560|gb|ACI38993.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4115]
 gi|209754078|gb|ACI75346.1| GTP-binding protein in thiophene and furan oxidation [Escherichia
           coli]
 gi|209754080|gb|ACI75347.1| GTP-binding protein in thiophene and furan oxidation [Escherichia
           coli]
 gi|209754082|gb|ACI75348.1| GTP-binding protein in thiophene and furan oxidation [Escherichia
           coli]
 gi|209754084|gb|ACI75349.1| GTP-binding protein in thiophene and furan oxidation [Escherichia
           coli]
 gi|209754086|gb|ACI75350.1| GTP-binding protein in thiophene and furan oxidation [Escherichia
           coli]
 gi|209914441|dbj|BAG79515.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|215267117|emb|CAS11564.1| cytoplasmic insertase into membrane protein, Sec-system
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217321710|gb|EEC30134.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. TW14588]
 gi|218354160|emb|CAV00764.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli 55989]
 gi|218363041|emb|CAR00680.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli IAI1]
 gi|218367550|emb|CAR05335.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli S88]
 gi|218372541|emb|CAR20416.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli IAI39]
 gi|218429558|emb|CAR10381.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli ED1a]
 gi|218434449|emb|CAR15377.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli UMN026]
 gi|222035420|emb|CAP78165.1| Inner membrane protein oxaA [Escherichia coli LF82]
 gi|226902771|gb|EEH89030.1| inner-membrane protein [Escherichia sp. 3_2_53FAA]
 gi|227839206|gb|EEJ49672.1| Oxa1 family cytochrome oxidase biogenesis protein [Escherichia coli
           83972]
 gi|254595108|gb|ACT74469.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli O157:H7 str. TW14359]
 gi|257756533|dbj|BAI28035.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli O26:H11 str. 11368]
 gi|257761657|dbj|BAI33154.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli O103:H2 str. 12009]
 gi|281180760|dbj|BAI57090.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|284923789|emb|CBG36887.1| inner membrane protein [Escherichia coli 042]
 gi|290764997|gb|ADD58958.1| Preprotein translocase subunit YidC [Escherichia coli O55:H7 str.
           CB9615]
 gi|291425636|gb|EFE98672.1| inner membrane protein translocase component YidC [Escherichia coli
           FVEC1412]
 gi|291468293|gb|EFF10788.1| conserved hypothetical protein [Escherichia coli B354]
 gi|294493492|gb|ADE92248.1| inner membrane protein OxaA [Escherichia coli IHE3034]
 gi|298276922|gb|EFI18440.1| inner membrane protein oxaA [Escherichia coli FVEC1302]
 gi|300300585|gb|EFJ56970.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 185-1]
 gi|300306881|gb|EFJ61401.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 200-1]
 gi|300360094|gb|EFJ75964.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 198-1]
 gi|300398372|gb|EFJ81910.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 69-1]
 gi|300404924|gb|EFJ88462.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 84-1]
 gi|300408368|gb|EFJ91906.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 45-1]
 gi|300418369|gb|EFK01680.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 182-1]
 gi|300454372|gb|EFK17865.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 21-1]
 gi|300523196|gb|EFK44265.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 119-7]
 gi|300531939|gb|EFK53001.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 107-1]
 gi|300838799|gb|EFK66559.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 124-1]
 gi|300848097|gb|EFK75857.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 78-1]
 gi|305850337|gb|EFM50794.1| putative inner membrane protein translocase component YidC
           [Escherichia coli NC101]
 gi|306906909|gb|EFN37418.1| membrane protein insertase [Escherichia coli W]
 gi|307555846|gb|ADN48621.1| 60 kDa inner-membrane protein [Escherichia coli ABU 83972]
 gi|307628782|gb|ADN73086.1| putative inner membrane protein translocase component YidC
           [Escherichia coli UM146]
 gi|312287446|gb|EFR15354.1| inner membrane protein oxaA [Escherichia coli 2362-75]
 gi|312948273|gb|ADR29100.1| putative inner membrane protein translocase component YidC
           [Escherichia coli O83:H1 str. NRG 857C]
 gi|315063011|gb|ADT77338.1| cytoplasmic insertase into membrane protein, sec system
           [Escherichia coli W]
 gi|315254606|gb|EFU34574.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 85-1]
 gi|315285489|gb|EFU44934.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 110-3]
 gi|315296905|gb|EFU56193.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 16-3]
 gi|320201267|gb|EFW75848.1| Inner membrane protein translocase component YidC, long form
           [Escherichia coli EC4100B]
 gi|320639431|gb|EFX09046.1| membrane protein insertase [Escherichia coli O157:H7 str. G5101]
 gi|320644874|gb|EFX13910.1| membrane protein insertase [Escherichia coli O157:H- str. 493-89]
 gi|320650138|gb|EFX18634.1| membrane protein insertase [Escherichia coli O157:H- str. H 2687]
 gi|320655486|gb|EFX23421.1| membrane protein insertase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320661112|gb|EFX28548.1| membrane protein insertase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666238|gb|EFX33244.1| membrane protein insertase [Escherichia coli O157:H7 str. LSU-61]
 gi|323155382|gb|EFZ41565.1| inner membrane protein oxaA [Escherichia coli EPECa14]
 gi|323380927|gb|ADX53195.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Escherichia coli KO11]
 gi|323939231|gb|EGB35444.1| membrane protein insertase [Escherichia coli E482]
 gi|323944178|gb|EGB40258.1| membrane protein insertase [Escherichia coli H120]
 gi|323949950|gb|EGB45834.1| membrane protein insertase [Escherichia coli H252]
 gi|323954999|gb|EGB50777.1| membrane protein insertase [Escherichia coli H263]
 gi|323975227|gb|EGB70331.1| membrane protein insertase [Escherichia coli TW10509]
 gi|324008042|gb|EGB77261.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 57-2]
 gi|324012733|gb|EGB81952.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 60-1]
 gi|324018426|gb|EGB87645.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 117-3]
 gi|324115942|gb|EGC09868.1| membrane protein insertase [Escherichia coli E1167]
 gi|330908022|gb|EGH36541.1| inner membrane protein translocase component YidC, long form
           [Escherichia coli AA86]
 gi|331042031|gb|EGI14175.1| inner membrane protein OxaA [Escherichia coli M605]
 gi|331053264|gb|EGI25297.1| inner membrane protein OxaA [Escherichia coli TA206]
 gi|331057866|gb|EGI29852.1| inner membrane protein OxaA [Escherichia coli TA143]
 gi|331062612|gb|EGI34532.1| inner membrane protein OxaA [Escherichia coli TA271]
 gi|331067642|gb|EGI39044.1| inner membrane protein OxaA [Escherichia coli TA280]
 gi|331072976|gb|EGI44301.1| inner membrane protein OxaA [Escherichia coli H591]
 gi|331077801|gb|EGI49013.1| inner membrane protein OxaA [Escherichia coli H299]
 gi|332104857|gb|EGJ08203.1| inner-membrane protein [Shigella sp. D9]
          Length = 548

 Score =  333 bits (852), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|194435576|ref|ZP_03067679.1| inner membrane protein OxaA [Escherichia coli 101-1]
 gi|253775660|ref|YP_003038491.1| inner membrane protein translocase component YidC [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163657|ref|YP_003046765.1| putative inner membrane protein translocase component YidC
           [Escherichia coli B str. REL606]
 gi|300932337|ref|ZP_07147605.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 187-1]
 gi|194425119|gb|EDX41103.1| inner membrane protein OxaA [Escherichia coli 101-1]
 gi|242379245|emb|CAQ34050.1| inner-membrane protein insertion factor, subunit of
           SecD-SecF-YajC-YidC Secretion Complex and Sec Protein
           Secretion Complex [Escherichia coli BL21(DE3)]
 gi|253326704|gb|ACT31306.1| 60 kDa inner membrane insertion protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975558|gb|ACT41229.1| inner membrane protein translocase component YidC [Escherichia coli
           B str. REL606]
 gi|253979714|gb|ACT45384.1| inner membrane protein translocase component YidC [Escherichia coli
           BL21(DE3)]
 gi|300459923|gb|EFK23416.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 187-1]
 gi|323959771|gb|EGB55421.1| membrane protein insertase [Escherichia coli H489]
 gi|323971183|gb|EGB66429.1| membrane protein insertase [Escherichia coli TA007]
          Length = 548

 Score =  333 bits (852), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPMYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|82546030|ref|YP_409977.1| inner membrane protein translocase component YidC [Shigella boydii
           Sb227]
 gi|187730301|ref|YP_001882461.1| putative inner membrane protein translocase component YidC
           [Shigella boydii CDC 3083-94]
 gi|123558282|sp|Q31UV9|OXAA_SHIBS RecName: Full=Inner membrane protein oxaA
 gi|254778164|sp|B2TUS3|OXAA_SHIB3 RecName: Full=Inner membrane protein oxaA
 gi|81247441|gb|ABB68149.1| 60 kDa inner-membrane protein [Shigella boydii Sb227]
 gi|187427293|gb|ACD06567.1| inner membrane protein OxaA [Shigella boydii CDC 3083-94]
          Length = 548

 Score =  333 bits (852), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKTQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|121730052|ref|ZP_01682461.1| inner membrane protein, 60 kDa [Vibrio cholerae V52]
 gi|121628201|gb|EAX60724.1| inner membrane protein, 60 kDa [Vibrio cholerae V52]
          Length = 510

 Score =  333 bits (852), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 133/535 (24%), Positives = 228/535 (42%), Gaps = 37/535 (6%)

Query: 36  ERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95
           +              +    +         + +  + +    L  SI+  G       L 
Sbjct: 1   QATQQAQSTGAAPAPSFSDELDPTPAQNVAAKAKTITVSTDVLTLSIDTLGGDVVSAKLN 60

Query: 96  GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----T 151
            Y  +++S    V L +     + + A+   V         N+   + + +         
Sbjct: 61  QYSEELNSPESFVLLQNTQG--HQFIAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQ 118

Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
               I + ++       +  I     Y   +V  V NNS  +        + ++   +  
Sbjct: 119 DELRIPMTYQANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGG 178

Query: 212 N-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKET 269
           N       G      D    +  + D++  ++S     + +W+ +   Y+AS +IP  E 
Sbjct: 179 NLAMPTYRGGAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEP 238

Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329
                 + +++              TI  G        L+ G K    +         P 
Sbjct: 239 QAQLYSRVINNLGD---MGIRTPNKTIANGDKAEFEATLWVGPKLQDQMAATA-----PN 290

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            ++++D+GW +FIAKP+  L+S     VGN+G+AI+  T  V+   +PL K QY S A M
Sbjct: 291 LDLVVDYGWLWFIAKPLHWLLSVIQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKM 350

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QPK+  +RE+      Q + + M++LYK   +NPL GC PILLQ+P+F A+Y  +  
Sbjct: 351 RMLQPKLQAMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALME 409

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S+E+RH+PF+GWI DL+A DP                     I P++M  SMF+  KMSP
Sbjct: 410 SVELRHSPFFGWIHDLSAQDPYY-------------------ILPLLMGASMFVIQKMSP 450

Query: 510 PP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
               D  Q  I+ +MPV+F F    FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 451 TTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 505


>gi|160901487|ref|YP_001567069.1| 60 kDa inner membrane insertion protein [Delftia acidovorans SPH-1]
 gi|160367071|gb|ABX38684.1| 60 kDa inner membrane insertion protein [Delftia acidovorans SPH-1]
          Length = 570

 Score =  333 bits (852), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 135/602 (22%), Positives = 241/602 (40%), Gaps = 53/602 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYP----------------RIEEMNNERKNIQTVK 44
           M       + +     +V  W  + V+                   E             
Sbjct: 1   MNDIRRTILWVIFGFSLVLLWDKWQVHSGKKATFFPAPAVATAPAPETGKAPGDASVPSA 60

Query: 45  QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                  +         A   +    V +    L  + + +G       L  Y   V  +
Sbjct: 61  AAAATAGAGEVPGGAAAAPEAAPRQNVTISTDVLRLTFDSQGGTLRHAELLKYADSVHKD 120

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
            P+V  L   +    Y  +   +             +      K       ++    +  
Sbjct: 121 KPVV--LFDESVHRVYLGQSGLIGGGFPTHKTTMTALPGARELKDGEDQMELRFESPDMG 178

Query: 165 NILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA---TNTFGVQEGF 220
            +   +  +L    Y   +   V N     +      +++R   +     +  +    G 
Sbjct: 179 GVKLVKIWTLKRGAYDIGVRHEVVNTGTAAVSPQLYLQLVRDGNKPEGEQSTMYSTFTGP 238

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLS 279
                +K   + ++ DIE    S    S+  ++ +   Y+AS ++ ++     +  + + 
Sbjct: 239 AVYTDEKKYQKVEFKDIESGKASVEKSSSGGYVAMVQHYFASAWLLAEGIQRDNFLRKVD 298

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
           +    Y         TI PG+S +    LFAG +    +         P  E++ D+GW 
Sbjct: 299 NN--LYAVGMITPVGTIEPGQSKSVEARLFAGPQIEKRLESLA-----PGLELVKDYGWL 351

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             +AKP++ L+   +  +GN+G +I+   + +K+ F+ L  K Y S A MK I P+I E+
Sbjct: 352 TILAKPLYWLLDKLHGFLGNWGWSIVALVLLLKIAFYWLNAKAYSSMAKMKAINPRIMEM 411

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           RE+ K   PQ +Q+ M+++Y+   +NP+ GC PI++QIPVF A+Y V+  S+E+R+AP+ 
Sbjct: 412 RERLKD-KPQQMQQEMMRIYREEKVNPMGGCLPIIIQIPVFIALYWVLLSSVEIRNAPWI 470

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
           GWI DL+A DP                     I P++M+LS  +Q  ++P P D  QA +
Sbjct: 471 GWITDLSAKDPLF-------------------ILPVLMTLSSLLQTALNPAPPDPMQAKM 511

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           +  MP+VF      FPAGL++YW  +N++SI QQ +I    G        L   F K+  
Sbjct: 512 MWIMPLVFSVMFFFFPAGLVLYWLTNNILSIAQQWIINTRMGVPPQF--NLPK-FGKSTP 568

Query: 580 SQ 581
           ++
Sbjct: 569 AK 570


>gi|194431207|ref|ZP_03063500.1| inner membrane protein OxaA [Shigella dysenteriae 1012]
 gi|194420662|gb|EDX36738.1| inner membrane protein OxaA [Shigella dysenteriae 1012]
          Length = 548

 Score =  332 bits (851), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMATVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|261400585|ref|ZP_05986710.1| membrane protein insertase, YidC/Oxa1 family [Neisseria lactamica
           ATCC 23970]
 gi|269209662|gb|EEZ76117.1| membrane protein insertase, YidC/Oxa1 family [Neisseria lactamica
           ATCC 23970]
          Length = 548

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 136/575 (23%), Positives = 230/575 (40%), Gaps = 55/575 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A+++ I+  W+  +  P+      +    Q          +  A     
Sbjct: 1   MDF-KRLTAFFAIALAIMIGWEKMFPAPQTAPAPGQAAQQQRQTVATASAEAALAPATP- 58

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      + P V  L     +  Y
Sbjct: 59  ----------ITVTTDAVQAVIDEKSGDLRRLTLLKYKATGDEHKPFV--LFGDGKEYTY 106

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +      ++L     N +  ++  +     YL
Sbjct: 107 VAQSELLDAQGNNVLKGIGFTAPQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 166

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237
             +   + N        S   RI+R + Q     +      G +    +    +  +SD+
Sbjct: 167 VNVRFDIANTGGKPANLSADYRIVRDRSQPEGQGYFTRSYLGPVVYTPEGGFQKVSFSDL 226

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +                      
Sbjct: 227 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCAAGECGIDIKRRNDKL 286

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A        I  G    T   L+AG +    I          + ++  D+G  ++ A 
Sbjct: 287 YSASVGVPLAAIPAGAKAETAVNLYAGPQTTSVIAGIAD-----KLQLAKDYGKVHWFAS 341

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 342 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 401

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 402 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 460

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ +DP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 461 LSRSDPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 501

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 502 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 536


>gi|254447604|ref|ZP_05061070.1| inner membrane protein, 60 kDa [gamma proteobacterium HTCC5015]
 gi|198262947|gb|EDY87226.1| inner membrane protein, 60 kDa [gamma proteobacterium HTCC5015]
          Length = 553

 Score =  332 bits (851), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 143/577 (24%), Positives = 265/577 (45%), Gaps = 42/577 (7%)

Query: 1   MERNWNYFVA-IALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVD-------- 50
           M+    + +  +AL   ++Y  WQ+ Y   +      E  +        Q          
Sbjct: 1   MDNLRIFLLISLALVGAMIYGQWQDDYADQKAAVTQTESASSSVTTPNPQAAKDLPSRPV 60

Query: 51  NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
           +  ++   D  A+    +  + +K   L  +IN +G    +  L  Y  ++   + +V L
Sbjct: 61  SENSSTTADTAAETQVENQSIRVKTDVLDIAINTRGGNVVESQLLQYSTELGEET-LVKL 119

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPIKLVFKNANNIL 167
              S+    +F+    +     +  P+ + V+     +       T  + LV++     +
Sbjct: 120 --QSSQPQRFFSVQSGLLGNAGVPAPDHHAVYRSEKTEYQLGAKDTVTVPLVWEQDGLRV 177

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227
            +R       YLF +   + N +          ++ R +   +++ F V      +   +
Sbjct: 178 TKRYTFYKGSYLFDLSFEIDNQTPQNWSGHQYRQLQRAEFDDSSSPFLVTYTGGVIYNQE 237

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              ++   D  + S  +    + W  +   Y+ +  +P KET+ H   + +S    +   
Sbjct: 238 DRYQKLDYDELEESPLSQSFDHGWAAMIQHYFLTALVPPKETANHYYSRGVSKAEGKRYI 297

Query: 288 -KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
              ++ EI +  G+S + T  +F G K    +    +       ++ +D+G+   ++KP+
Sbjct: 298 LGMTSPEIAVPAGESASRTTQVFVGPKLQDRLEEVAE-----GLDLTVDYGFLTVLSKPL 352

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+S+ +  +GN+G +I++ T  +KLLFFPL++  Y S A M+ + PK+ ++RE++   
Sbjct: 353 FHLLSWLHGFIGNWGWSIIVLTAIIKLLFFPLSQASYRSMAKMRQVTPKLQQIRERYSD- 411

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q L + M++LYKT  INP+  C P+L+QIPVF A+Y  +  S+E+R APF  WI DL+
Sbjct: 412 DRQRLSQEMMKLYKTEKINPVGSCLPMLIQIPVFIALYWALLESVELRQAPFILWINDLS 471

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
             DP                     + P+IM L+M++Q K++P P D  QA +   MPVV
Sbjct: 472 TKDPFY-------------------VLPLIMGLTMYLQQKLNPTPPDPMQAKVFMMMPVV 512

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           F    + FP+GL++YW  +N +SI+QQ  I +   AE
Sbjct: 513 FTAFFAFFPSGLVLYWVTNNTLSIIQQWWITRQLEAE 549


>gi|193063841|ref|ZP_03044928.1| inner membrane protein OxaA [Escherichia coli E22]
 gi|192930556|gb|EDV83163.1| inner membrane protein OxaA [Escherichia coli E22]
          Length = 548

 Score =  332 bits (851), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVPVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|332533704|ref|ZP_08409563.1| OxaI/YidC membrane insertion protein [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332036868|gb|EGI73329.1| OxaI/YidC membrane insertion protein [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 545

 Score =  332 bits (851), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 135/569 (23%), Positives = 247/569 (43%), Gaps = 36/569 (6%)

Query: 1   MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           ME    + +   + +S ++   W N Y  P+ +     +       + +    S +   +
Sbjct: 1   MESQRTFLLIGLMLVSFLLFQEWDNDYNKPKADPSATTQTLQANSPESDDYIPSSSDSGL 60

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
              A  L+    +E+        I+ KG    + +L  Y     S +P   LL   ++  
Sbjct: 61  PASAT-LAKRSVIEITTDVFKVKIDTKGGDIVETDLLQYEKTKGSETPY-MLLGQLDSGK 118

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNANNILFERTISLD- 175
            YF++   +         N    ++              + L F ++N + F +T     
Sbjct: 119 QYFSQSGLIGLNGPDASANGRPTYSTEQKSYTLTGDELRVPLQFTDSNGVSFTKTYVFKK 178

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             Y   +   + N +   ++     +I R   +  +       G      ++   +  +S
Sbjct: 179 GQYDVGLEYKINNTTSAPLQVQLYTQIKRTVQEKGSMVDQNYLGAAYGTDEEPYEKYSFS 238

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D+   +++       ++     Y+ S ++P ++ +            A          + 
Sbjct: 239 DMADKNLNKN-TQGGYVAFIQHYFVSAWVPMQDQTNTIYSLITKSNAA--IIGAKDPAVN 295

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I  G   T T   + G KE   +         P  ++ +D+GW +FI++P+F+L+ + ++
Sbjct: 296 IQAGSEQTLTATYYMGPKESDILEAIH-----PDLDLTVDYGWLWFISQPLFVLLKWLHS 350

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           ++GN+G+AI+  T+ VK L +PL K QY S A M+ +QPK+  L+EKF     Q   +A 
Sbjct: 351 ILGNWGVAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMAALKEKFGD-DRQKFGQAT 409

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           +++YK   +NP+ GC+PILLQ+P+F A++ V   S E+RHA F  W+ DL+A DP     
Sbjct: 410 MEMYKKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFIFWLTDLSAQDPYY--- 466

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534
                           + PI+   SMF+  K+ P    D  Q  ++ +MPV+F      F
Sbjct: 467 ----------------VLPILFGASMFVTQKLQPMTVTDPMQQKMMTFMPVIFSVFFLWF 510

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           P+GL++YW  SN+ISIVQ  +I +    +
Sbjct: 511 PSGLVLYWLVSNLISIVQMLIIYRGMEKK 539


>gi|194291287|ref|YP_002007194.1| inner membrane protein translocase component yidc [Cupriavidus
           taiwanensis LMG 19424]
 gi|254772772|sp|B3R883|OXAA_CUPTR RecName: Full=Inner membrane protein oxaA
 gi|193225122|emb|CAQ71133.1| preprotein translocase, cooperates with SecYEG and SecDFyajC
           translocon, membrane component [Cupriavidus taiwanensis
           LMG 19424]
          Length = 559

 Score =  332 bits (851), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 151/586 (25%), Positives = 248/586 (42%), Gaps = 60/586 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAW----------QNFYVYPRIEEMNNERKNI---------Q 41
           M+      + +  S+ +V  +            F+     ++  +              +
Sbjct: 1   MDI-KRTILWVIFSMSLVLLYDNWQRANGHASMFFPSTTQQQAASAPAASGAAAQGDVPK 59

Query: 42  TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
              QP    ++  A     +A A     ++ +   ++   I+  G     L L   H   
Sbjct: 60  ANVQPATGTSAAPAAGAAPQAAAQPTGEKIVVTTDTVRAEIDTAGGIVSRLELLKEHE-- 117

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP---TTPIKL 158
             +   V L    +    Y A    +      +LPN  TV+    G           + L
Sbjct: 118 -KDGKPVVLF-ERDNVRTYMARSGLI----GGDLPNHTTVFTAAPGPRALDGAEQVQVVL 171

Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQ 217
             +     L +        Y+      VTN     +  +    + R   +   + F    
Sbjct: 172 TGEKNGVKLVKTYTFRKGSYVVDSKFDVTNAGTAPVSPTLYLELARDGSKVEQSQFYSTF 231

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFK 276
            G           +  + DI K   +     +N W+ +   Y+AS +IP         F 
Sbjct: 232 TGPAIYTDADKYHKLSFEDIAKGKATVPAAANNGWVAMVQHYFASAWIPQTGKEH--SFY 289

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
                   Y+         + PG +++T   LFAG +E   +         P  E++ D+
Sbjct: 290 VQQIDPNLYRVGIQQPLGELAPGATVSTDARLFAGPQEEHMLEKIA-----PGLELVKDY 344

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           GW   +AKP+F L+   +  +GN+G +I+  TV +KL+FFPL+   Y S   MK++QP++
Sbjct: 345 GWLTILAKPLFWLLEKLHGFLGNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRM 404

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
             +RE++K   PQ + + M+ LY+T  +NPL GC PI++QIPVF A+Y V+  S+EMR A
Sbjct: 405 TSIRERYKN-DPQKMNQEMMALYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGA 463

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+ GWI DL+  DP                     I PI+M++SMF+Q K++P P D  Q
Sbjct: 464 PWLGWIHDLSVPDPFY-------------------ILPIVMAVSMFVQTKLNPTPPDPVQ 504

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           A ++  MP+VF      FPAGL++YW  +N++SI QQ  I +M G 
Sbjct: 505 AKVMMIMPLVFSVMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGK 550


>gi|324111603|gb|EGC05584.1| membrane protein insertase [Escherichia fergusonii B253]
          Length = 548

 Score =  332 bits (851), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAESQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|194428126|ref|ZP_03060670.1| inner membrane protein OxaA [Escherichia coli B171]
 gi|194413884|gb|EDX30162.1| inner membrane protein OxaA [Escherichia coli B171]
          Length = 548

 Score =  332 bits (851), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 250/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y   ++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKKLNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|329894825|ref|ZP_08270625.1| OxaI/YidC membrane insertion protein [gamma proteobacterium
           IMCC3088]
 gi|328922719|gb|EGG30053.1| OxaI/YidC membrane insertion protein [gamma proteobacterium
           IMCC3088]
          Length = 554

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 144/574 (25%), Positives = 255/574 (44%), Gaps = 45/574 (7%)

Query: 1   MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+      +     LS +++  W  F      ++         +        +S    +I
Sbjct: 1   MDIQRYALIGAIAVLSWMLLTEWVIFKDKATEQQAVMTPAFAPSESVSLDDSSSDIPSII 60

Query: 59  DDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
           D   ++       +    + +   +L+ +I+L+G       LR Y   +   S    LL 
Sbjct: 61  DASDESSLGLSNATNQGVINVTTDTLVATIDLQGGDIVYAGLRDYLAKIDDPSNPFVLL- 119

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN---ILFE 169
             N +  Y A+   +          +       +  +      + +   + +N    + +
Sbjct: 120 EQNARRVYVAQSGLIGPDGVDSKARAQYRSEEANYALADDQATLSVKLYHTDNAGLSVVK 179

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-----FGVQEGFIAVL 224
             +     +L  +   ++N+ +        G++ R      ++           G     
Sbjct: 180 EFVFNRGTHLIDVNYQLSNSDVKSKTVYLFGQLKRDSSADPSSENSGMGLAPFLGAATSN 239

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
            D    +  + D+ +          SW+ +   Y+ S +IP+ +       +   DG   
Sbjct: 240 ADDRFKKFNFKDMLEEPYKA-QTQGSWIALIQHYFLSAWIPNPDKIHTYTTRVTKDGFN- 297

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
             A F +    + PG + TT+  L+ G K+  T+         P  E+ +D+GW ++IA+
Sbjct: 298 -IAGFLSPATVVAPGATATTSAQLYVGPKDQYTLEKIS-----PFLELSVDYGWLWWIAQ 351

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  + LVGN+G+AI+L TV +K  FF L+   Y S ANM+ +QPK+ ++RE++ 
Sbjct: 352 PLFWLLTKIHGLVGNWGVAIILLTVLIKGAFFKLSAASYRSMANMRRVQPKMADIREQYA 411

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               Q   +AM++LYK   INP+ GC PIL+Q+PVF A+Y  +  S+E+RHAPF  WI D
Sbjct: 412 DDK-QKQSQAMMELYKKEKINPMGGCLPILVQMPVFIALYWTLMESVELRHAPFALWIND 470

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+  DP                     + PI+M  SM+   K++PPP D  QA ++ W+P
Sbjct: 471 LSVMDPYF-------------------VLPILMGASMWFMQKLNPPPPDPMQAKLMQWLP 511

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +VF F    FPAGL++YW  +N++S+ QQ +I K
Sbjct: 512 IVFTFFFLWFPAGLVLYWVVNNLLSMTQQYIITK 545


>gi|332525676|ref|ZP_08401825.1| yidc translocase/secretase [Rubrivivax benzoatilyticus JA2]
 gi|332109235|gb|EGJ10158.1| yidc translocase/secretase [Rubrivivax benzoatilyticus JA2]
          Length = 552

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 132/580 (22%), Positives = 224/580 (38%), Gaps = 47/580 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE----------MNNERKNIQTVKQPNQVD 50
           M       + +     +   W  +  +                                 
Sbjct: 1   MTDIRRTILWVVFVTSLFLLWDAWNKHNGQPSLFGGPARPAATAASAPGSAASAGVPTAS 60

Query: 51  NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
                     +  A +   +V +    +  + +  G Q   L L  Y      +  +V L
Sbjct: 61  AVQTPAGAVPQPAAPAGGEQVVVTTDLVKATFDSIGGQLVRLELLNYRDANHPDQNVVLL 120

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANN 165
                    Y A+   ++    + LP   T   +  G          L  +         
Sbjct: 121 --DRVAAREYVAQTGLITGQAGVALPTHLTPMTVAPGARTLADGQDSLTLRFETAPLDGR 178

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAV 223
            L +        Y   +     N     +      ++ R    P+  ++ +    G    
Sbjct: 179 RLVKTYTFKRGDYAVGVRHEFVNEGSTPVTPQLYLQLARDGNAPEGESHFYSTFTGPAMF 238

Query: 224 LGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                  +  + DI K+   +    ++ W+ +   Y+AS +I         +F+    G 
Sbjct: 239 TSTSKYKKIDFKDIAKNDAGHDKTANDGWIAMVQHYFASAWIV--NAEGQREFRTAKIGD 296

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             Y          + PG S    + LF G +   ++         P  E L D+GW   +
Sbjct: 297 NLYTIAMVLPMGEVAPGASKALESQLFVGPQLETSLAALA-----PGLEYLKDYGWLMPL 351

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           +KP+F L+    + +GN+G AI+   V +K+ F+ L    Y S A M+ I P++ E+RE+
Sbjct: 352 SKPLFWLLDKLNSAIGNWGWAIVALVVLLKIAFYWLNASAYKSMAKMRAINPRVMEMRER 411

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +K   PQ +Q+ M+++Y+   +NPL GC PIL+Q+P F A+Y V+  S+EMR+AP+ GWI
Sbjct: 412 YKD-KPQQMQQEMMRIYREEKVNPLGGCLPILIQMPFFIALYWVLLSSVEMRNAPWIGWI 470

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DL+A DP                     I PI+M+ S  +Q+ +   P D  QA ++ +
Sbjct: 471 TDLSAKDPWF-------------------ILPILMTASSLVQVALGAKPPDPMQARLMWF 511

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           MP+ F      FPAGL++YW  +NV+SI QQ  I K  G 
Sbjct: 512 MPLAFGVMFFFFPAGLVLYWLTNNVLSIAQQWYINKKLGV 551


>gi|163859332|ref|YP_001633630.1| putative inner membrane protein translocase component YidC
           [Bordetella petrii DSM 12804]
 gi|254772752|sp|A9IJB7|OXAA_BORPD RecName: Full=Inner membrane protein oxaA
 gi|163263060|emb|CAP45363.1| yidC [Bordetella petrii]
          Length = 563

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 146/592 (24%), Positives = 253/592 (42%), Gaps = 53/592 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYP------------------RIEEMNNERKNIQT 42
           M+      + +  S  ++  W N+ ++                     ++     +    
Sbjct: 1   MDI-RRTILWMIFSFSLLLLWNNWQIHNGKPSLFGTPPASSAASPAEGQQAAANGQAATP 59

Query: 43  VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
                    + + V     A A +   +V +    L  + +  GAQ     L  Y     
Sbjct: 60  SVPTTPAAAAASTVPGATAAPAAAKVEQVVVSTDVLRLTFDTTGAQLIRAELLKYPTSGQ 119

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVF 160
            N P V L    + +  Y  +   V   N    PN  T + L+S        +  +    
Sbjct: 120 PNKPTVLL--DRSPELTYVVQSGLVGAPNGQSFPNHQTPFRLVSTDHELKGDSLQVVFEA 177

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQE 218
            +    + +        Y   +  ++ N S   +  S   ++ R    P   ++ +    
Sbjct: 178 DSGGLKVTKTYTLHRGRYDIDVQHSLANTSDAPLAPSLYLQLERDGNDPADTSSFYHTFT 237

Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKY 277
           G           +  +SDI K   S   +  N WL +   Y+A+ ++P +     ++   
Sbjct: 238 GVAVYSEQDKFQKITFSDIAKGKGSYIKQADNGWLAVVQHYFATAWVPPQGKQRTNELLQ 297

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337
           +      Y A+      T+ PG +    + L+ G ++   +         P  E+++D+G
Sbjct: 298 VQPN--LYAARSIEAVGTVQPGATAQVDSRLWVGPQDQKAMAAVA-----PGLELVVDYG 350

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W   IAKP+F L+++ ++L+GN+G AI+  TV +K +FFPLA   Y S A MK + P++ 
Sbjct: 351 WLTIIAKPLFSLLTWLHSLLGNWGWAIVALTVIIKAVFFPLAAASYRSMARMKQVAPRLQ 410

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
            L+EK+     Q L +AM+++Y+T  INPL GC P+++QIPVF A+Y V+  S+EMR AP
Sbjct: 411 ALKEKYGD-DRQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAP 469

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           +  W+ DL+  DP                     I P +M  +MF+Q+K++P P D  QA
Sbjct: 470 WILWVHDLSVRDPYF-------------------ILPAVMMATMFLQIKLNPTPPDPIQA 510

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            ++  MP+VF   +  FPAGL++YW  +N +SI QQ  I +    +      
Sbjct: 511 KVMMIMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWTITRNLQRKAEAAAN 562


>gi|34499859|ref|NP_904074.1| putative inner membrane protein translocase component YidC
           [Chromobacterium violaceum ATCC 12472]
 gi|81711621|sp|Q7NPT8|OXAA_CHRVO RecName: Full=Inner membrane protein oxaA
 gi|34332914|gb|AAQ62063.2| integral membrane protein, 60 kDa [Chromobacterium violaceum ATCC
           12472]
          Length = 545

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 142/568 (25%), Positives = 246/568 (43%), Gaps = 46/568 (8%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + + LSV I++ W  +++     +    +    T    N    + A       
Sbjct: 1   MDSKRLIIFVLLSVGILFGWNEYFMPKHTPQQQAAKTQATTGAANNVAQPADANK----- 55

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
              L+   R+++K   +   I+  G     L L  +        P    L   + K  Y 
Sbjct: 56  ---LTRGQRIQVKTDLVEAEIDTVGGDLRSLKLLKHGAAEDHKQPFQ--LFEDSAKRVYV 110

Query: 122 AELDYVSTANNIELPNSNTVWNL-ISGKILTPTTPIKLVFKNANNILFERTISLDEH-YL 179
           A+   V+ +N     +     +   S ++   T  +KL   +AN +   +  +  ++ Y 
Sbjct: 111 AQTGLVAASNPALPTHKTVFTSDKPSYQLTGDTLEVKLTAPDANGVKVSKVYTFKKNSYE 170

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
             +   + N     +  +   R++R    P+          G      +    +  + D+
Sbjct: 171 IGVRYDIVNGGAAPLAPTAYYRLLRDSQAPEGEGRMAHTYTGPAVYTSEHKFQKVSFDDL 230

Query: 238 EKSSISN-FHESNSWLGISDKYWASVFI--PSKETSFHSQFKY----LSDGHARYQAKFS 290
            K         ++ W+ +   Y+ S +I  P    S     +     L +      A   
Sbjct: 231 AKGKGDYAKTTTDGWVAMLQHYFMSAWILKPLDGASVCKDERSCRFELKETAGLNSAAAL 290

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
            +  T+ PGKS++ +  L+AG +E+  I            E   D+G FY  A P+F L+
Sbjct: 291 VDYATVAPGKSLSVSVPLYAGPEEYNIISKLAD-----GMEYAKDFGIFYIFASPLFWLL 345

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
              + LV N+G AI+L T+ VK +F+PL    Y S A MK + P+++ L+ +      + 
Sbjct: 346 VKLHGLVSNWGWAIVLLTLTVKAVFYPLTAASYRSMAKMKALAPRLERLKAQHGDDRMK- 404

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
            Q+A++++YKT  +NPL GC P+L+QIPVF  +Y  +  S+E+R AP+  W  DLA  DP
Sbjct: 405 FQQAVMEMYKTEKVNPLGGCLPMLIQIPVFIGLYWALLASVELRGAPWVLWYTDLARPDP 464

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I P+IM+ +MF+Q  ++PPPAD  QA ++  MP+ F   
Sbjct: 465 YY-------------------ILPVIMAATMFLQTFLNPPPADPMQAKMMKIMPLAFSAL 505

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              FPAGL++Y+  +NV+S+ QQ  I K
Sbjct: 506 FFFFPAGLVLYYVVNNVLSMAQQWFINK 533


>gi|113869679|ref|YP_728168.1| putative inner membrane protein translocase component YidC
           [Ralstonia eutropha H16]
 gi|123133468|sp|Q0K5C1|OXAA_RALEH RecName: Full=Inner membrane protein oxaA
 gi|113528455|emb|CAJ94800.1| inner membrane protein [Ralstonia eutropha H16]
          Length = 555

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 154/582 (26%), Positives = 245/582 (42%), Gaps = 56/582 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVY--------PRIEEMNNERKNIQTVKQPNQVDNS 52
           M+      + +  S+ +V  + N+           P   +                V  +
Sbjct: 1   MDI-KRTILWVIFSMSLVLLYDNWQRSQGHASMFFPSTTQQAASAPAASGAAAQGDVPKA 59

Query: 53  Y-------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
                    A     +A A     +V +   ++   I+  G     L L   H     + 
Sbjct: 60  NVAPGAAGTAAPAAPQAAAQPTGEKVVVTTDTVRAEIDTAGGIVSRLELLKEHE---KDG 116

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP---TTPIKLVFKN 162
             V L    +    Y A    +      +LPN  TV+    G           + L  + 
Sbjct: 117 KPVVLF-ERDNVRTYMARSGLI----GGDLPNHTTVFTAAPGPRTLDGAEQLEVALTAEK 171

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQEGFI 221
               L +  +     Y+      VTN     +  +    + R   +   + F     G  
Sbjct: 172 NGVKLVKTYVFRKGSYVVDTKFAVTNAGAAPVSPTLYLELARDGSKVEQSQFYSTFTGPA 231

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
                    +  + DI K   +     +N W+ +   Y+AS +IP         F     
Sbjct: 232 VYTDADKYHKIDFEDIAKGKATVPAAANNGWVAMVQHYFASAWIPQTGKEH--SFYVQQI 289

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
               Y+         + PG ++TT   LFAG +E   +         P  E++ D+GW  
Sbjct: 290 DPHLYRVGVQQPLGELAPGATVTTDARLFAGPQEEHMLEKIA-----PGLELVKDYGWLT 344

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
            +AKP+F L+   +  +GN+G +I+  TV +KL+FFPL+   Y S   MK++QP++  +R
Sbjct: 345 ILAKPLFWLLEKLHGFLGNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIR 404

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           E++K   PQ + + M+ LYKT  +NPL GC PI++QIPVF A+Y V+  S+EMR AP+ G
Sbjct: 405 ERYKN-DPQKMNQEMMGLYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLG 463

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           WI DL+  DP                     I PI+M++SMF+Q K++P P D  QA ++
Sbjct: 464 WIHDLSVPDPFY-------------------ILPIVMAVSMFVQTKLNPTPPDPVQAKVM 504

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
             MP+VF      FPAGL++YW  +N++SI QQ  I +M G 
Sbjct: 505 MIMPLVFSVMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGK 546


>gi|212211697|ref|YP_002302633.1| 60 kDa inner membrane protein [Coxiella burnetii CbuG_Q212]
 gi|254772771|sp|B6J2B4|OXAA_COXB2 RecName: Full=Inner membrane protein oxaA
 gi|212010107|gb|ACJ17488.1| 60 kDa inner membrane protein [Coxiella burnetii CbuG_Q212]
          Length = 566

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 135/576 (23%), Positives = 244/576 (42%), Gaps = 44/576 (7%)

Query: 2   ERNWNYFVAIA---LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
                  + +    L++ +  AWQ  Y          E+              ++     
Sbjct: 1   MDIKRIILYVIVALLAIALFNAWQRDYPPTPKPTPTVEQPTANGDHPTAYTPPAFTPGAA 60

Query: 59  DDRAQA--------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
           +   +A        +S +  + ++   L   I+ +G       L  Y + +      V +
Sbjct: 61  EKTKKAGTIALTSKVSEARLITVRTDVLDVEIDTQGGNIVSAKLPKYPVSLEEKQTPVQI 120

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170
           LS       Y A+    +           +       +       ++L  +  + +L  +
Sbjct: 121 LSGE-PNELYVAQSGLTNGNGQPTTVQFESEKKQYVLENGQNQLIVQLTGRAPDGLLVTK 179

Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS- 228
           T +   + Y   +   V NN+    + S   +I R +P T  + F V+    A +G    
Sbjct: 180 TYTFHRDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHFYVRSYNGASMGSPQT 239

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHAR 284
              +  Y  ++K +I    +S  W+ +   Y+ S ++P      +  + ++   SD    
Sbjct: 240 PYEKLSYESLDKQNIDRTSQS-GWIAMQQHYFLSAWVPGNPELTYHYYSHVIPASDEPNV 298

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y   F + ++ +  G    T   L+ G +    +         P  E  ID+GW + I+ 
Sbjct: 299 YVVGFVSPQMNVAAGSEAATHATLYVGPEIAKRLKGLA-----PGLERTIDYGWLWPISM 353

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
            +F ++S  + +  N+G +I++TT+ +K++F+  + K + S A M+ +QP+I  L+E+  
Sbjct: 354 LLFWILSAVHAVFKNWGWSIIITTILIKIVFYWFSAKSFRSMARMREMQPRIQALKERHG 413

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               Q L +A ++LY+   INPL GC P+L+Q+PVF A Y VI  S+++R APF  WI D
Sbjct: 414 D-DRQALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIESVQLRQAPFIFWIHD 472

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+  DP                     I PIIM LSM  Q  +SP   D  Q  ++  +P
Sbjct: 473 LSVKDPYY-------------------ILPIIMGLSMLAQQWLSPTSPDPTQQKMMWILP 513

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
           V+F     +FPAGL++YW  +NV+  +QQ  + K +
Sbjct: 514 VIFTVFFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549


>gi|218551236|ref|YP_002385028.1| inner membrane protein translocase component YidC [Escherichia
           fergusonii ATCC 35469]
 gi|254772785|sp|B7LK48|OXAA_ESCF3 RecName: Full=Inner membrane protein oxaA
 gi|218358778|emb|CAQ91436.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia fergusonii ATCC 35469]
          Length = 548

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 139/572 (24%), Positives = 250/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFILK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227
              Y   +   V N     +  S  G++ +           ++        G      D+
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPYLDTGSSNFALHTFRGAAYSTPDE 228

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|323965767|gb|EGB61218.1| membrane protein insertase [Escherichia coli M863]
          Length = 548

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 250/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           +       +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDTNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQAGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|254282101|ref|ZP_04957069.1| inner membrane protein, 60 kDa [gamma proteobacterium NOR51-B]
 gi|219678304|gb|EED34653.1| inner membrane protein, 60 kDa [gamma proteobacterium NOR51-B]
          Length = 572

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 133/541 (24%), Positives = 234/541 (43%), Gaps = 37/541 (6%)

Query: 26  VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLK 85
                   +       T     +   +    +        + S  + +K  +L   I+L 
Sbjct: 52  EAQTPAANSGPVPETPTPAVTVEDLPTLTDAVPAPSQDIAADSTLIAVKTETLELVIDLN 111

Query: 86  GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNL 144
           G    ++ L  +   +   +    LL   N +  Y A+   V +   +            
Sbjct: 112 GGDIIEVALPRFPEQIDDPNQPFMLL-EQNDRRTYIAQSGLVGSDGIDHPQRAHYVSAQS 170

Query: 145 ISGKILTPTTPIKLVFKNANNIL-FERTISLDEHYLF-KIVDTVTNNSIDQIRFSPRGRI 202
                      I+L +   ++ L   +  +LD       +  +VTNN   + +  P  ++
Sbjct: 171 EYTATPGQPLSIELAWAGNSSELAITKRFTLDPESYVVDVEYSVTNNRGSRWQAVPFAQL 230

Query: 203 MRHKPQTATNT-----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257
            R                   G      D    +  + DI             W+ +   
Sbjct: 231 KRDNTPPPNADTSGLGMKPFLGAALTQPDDRFTKFDFGDIADEPFRKT-LPGGWIALMQH 289

Query: 258 YWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317
           Y+ S +I +   S +   +  + G       F++  + +  G + +    L+ G K+   
Sbjct: 290 YFVSAWIANPNQSHNYSTRQTTSGFN--IVGFTSPALAVDSGNTGSAGYRLYVGPKDQYQ 347

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           +            ++ +D+GW ++IA+P+F L++   ++VGN+G+AI+L TV VK  FF 
Sbjct: 348 LAELSD-----HLDLTVDYGWLWWIAQPLFWLLTKIQSVVGNWGVAIILLTVLVKGAFFK 402

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437
           L+   Y S A M+ +QPK+ ++RE++     +   + M++LY+   +NP+ GC PIL+Q+
Sbjct: 403 LSATSYRSMARMRKLQPKMVDIREQYADDKSK-QSQMMMELYRKEKVNPMGGCLPILIQM 461

Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
           PVF A+Y V+  S+E+RHAPF  WIKDL+  DP                     + P++M
Sbjct: 462 PVFIALYWVLMESVELRHAPFVLWIKDLSVMDPYF-------------------VLPLMM 502

Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             SMF   K++PPP D  QA I+ W+PV+F F    FPAGL++YW  +N++S+ QQ VI 
Sbjct: 503 GASMFFMQKLNPPPPDPMQAKIMQWLPVIFTFFFLWFPAGLVLYWVVNNLLSMTQQYVIT 562

Query: 558 K 558
           +
Sbjct: 563 R 563


>gi|77361918|ref|YP_341493.1| preprotein translocase; inner membrane protein (IMP) integration
           factor; binds TM regions of nascent IMPs; required for
           Sec-independent IMP integration; associated with the
           with SecYEG and SecDFyajC translocase [Pseudoalteromonas
           haloplanktis TAC125]
 gi|123589158|sp|Q3IK55|OXAA_PSEHT RecName: Full=Inner membrane protein oxaA
 gi|76876829|emb|CAI88051.1| preprotein translocase ; inner membrane protein (IMP) integration
           factor; binds TM regions of nascent IMPs; required for
           Sec-independent IMP integration; associated with the
           with SecYEG and SecDFyajC translocase [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 544

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 137/570 (24%), Positives = 242/570 (42%), Gaps = 39/570 (6%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME     F+ I L   S ++   W   Y  P+ +     +    T  +      + +   
Sbjct: 1   MESQR-TFLFIGLMLVSFLLFQEWNTDYNTPKADPSATTQTLNPTSSESEDYVPTSSDSA 59

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
           +   A  L+    +E+        I+ +G    +  L  Y     S +P + L       
Sbjct: 60  LPASAT-LAKRSVIEITTDVFKVKIDTRGGDIVETYLLQYEETKGSETPYMLLGEFDG-- 116

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVFKNANNILFERTISL- 174
             YF++   +              +++             + L F ++N + F +T    
Sbjct: 117 KQYFSQSGLIGLNGPDASAQGRPTYHVEQKSYTLTGDELRVPLQFTDSNGVNFTKTYVFK 176

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
              Y   +  T+ N +   ++     ++ R      +       G      D    +  +
Sbjct: 177 KGQYDVALEYTINNTTSTPLQVQLYTQVKRTVQDKGSMVDQNYLGAAYGTDDDPYEKYSF 236

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           SD+   +++       ++     Y+ S ++P ++ S       L               +
Sbjct: 237 SDMADKNLNKITLG-GYVAFIQHYFVSAWVPMQDQSNT--LYSLITKSNAAIIGVKDEAV 293

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
            I  G   T T   + G KE   +         P  ++ +D+GW +FI++P+F+L+ + +
Sbjct: 294 NIQAGSEQTLTATYYMGPKESDVLEAIH-----PDLDLTVDYGWLWFISQPLFVLLKWLH 348

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           +++GN+G+AI+  T+ VK L +PL K QY S A M+ +QPK+  L+EKF     Q   +A
Sbjct: 349 SILGNWGVAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMAALKEKFGD-DRQKFGQA 407

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
            +++YK   +NP+ GC+PILLQ+P+F A++ V   S E+RHA F  W+ DL+A DP    
Sbjct: 408 TMEMYKKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFIFWLTDLSAKDPYY-- 465

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            + PI+   SMFI  K+ P    D  Q  ++ +MPV+F      
Sbjct: 466 -----------------VLPILFGASMFITQKLQPMTVTDPMQQKMMTFMPVIFSVFFLW 508

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+ISIVQ  +I +    +
Sbjct: 509 FPSGLVLYWLVSNLISIVQMLIIYRGMEKK 538


>gi|300719144|ref|YP_003743947.1| Inner membrane protein [Erwinia billingiae Eb661]
 gi|299064980|emb|CAX62100.1| Inner membrane protein [Erwinia billingiae Eb661]
          Length = 548

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 137/574 (23%), Positives = 245/574 (42%), Gaps = 57/574 (9%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N F+   + +S +I  AWQ  +    ++    +          NQ          
Sbjct: 1   MDSQRNLFLIAFLFVSFMIWQAWQTDHAPQPVQTQTTQNTTSAAGDAANQGVP------- 53

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                A      + +K   L   IN +G   +   L  Y   + S+ P   L   +N   
Sbjct: 54  -----ASGQGKTITVKTDVLTLHINTRGGDIEQAQLLTYPDKLGSSQPFQLL--ETNPGF 106

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTIS 173
            Y A+             N        +              I + +   N   + +T  
Sbjct: 107 LYQAQSGLTGRNGPDNPANGARPLFTTTQDSFEMADGQSELRIPMTYTAENGATYTKTFV 166

Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227
           L    +   +   V N +   +  +  G++ +         T +N F +     A     
Sbjct: 167 LKRGEFAINVDYQVNNTTQQPLEMAMFGQLKQTIDLPKHRDTGSNNFALHTFRGAAYSSS 226

Query: 228 S--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
                + K+  I  +   +   +N W+ +  +Y+A+ ++P       +     + G+   
Sbjct: 227 ETNYEKYKFDKISDNENLSTTTNNGWVAMLQQYFATAWVPRTNG--TNTLYTSNLGNGIA 284

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
              + +  +TI PG        L+ G +    +         P  ++ +D+GW +FI++P
Sbjct: 285 AIGYKSAPVTIAPGAQQNLAATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQP 339

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+   
Sbjct: 340 LFKLLKFLHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERI-G 398

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q + + M+ LYK   +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL
Sbjct: 399 EDKQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524
           +A DP                     I PI+M ++MF   KMSP    D  Q  I+ +MP
Sbjct: 459 SAQDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           V+F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|260870436|ref|YP_003236838.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli O111:H- str. 11128]
 gi|257766792|dbj|BAI38287.1| cytoplasmic insertase into membrane protein, Sec system
           [Escherichia coli O111:H- str. 11128]
          Length = 548

 Score =  331 bits (849), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QHISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|315292865|gb|EFU52217.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia
           coli MS 153-1]
          Length = 548

 Score =  331 bits (849), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PYLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|153209754|ref|ZP_01947492.1| Inner membrane protein oxaA [Coxiella burnetii 'MSU Goat Q177']
 gi|212217713|ref|YP_002304500.1| 60 kDa inner membrane protein [Coxiella burnetii CbuK_Q154]
 gi|254772770|sp|B6J8U7|OXAA_COXB1 RecName: Full=Inner membrane protein oxaA
 gi|120575257|gb|EAX31881.1| Inner membrane protein oxaA [Coxiella burnetii 'MSU Goat Q177']
 gi|212011975|gb|ACJ19355.1| 60 kDa inner membrane protein [Coxiella burnetii CbuK_Q154]
          Length = 566

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 135/577 (23%), Positives = 245/577 (42%), Gaps = 45/577 (7%)

Query: 1   MERNWNYFVAIA---LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +    L++ +  AWQ  Y          E+              ++    
Sbjct: 1   MDI-KRIILYVIVALLAIALFNAWQRDYPPTPKPTPTVEQPTANGDHPTAYTPPAFTPGA 59

Query: 58  IDDRAQA--------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
            +   +A        +  +  + ++   L   I+ +G       L  Y + +      V 
Sbjct: 60  AEKTKKAGTIALTSKVPEARLITVRTDVLDVEIDTQGGNIVSAKLPKYPVSLEEKQTPVQ 119

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           +LS       Y A+    +           +       +       ++L  +  + +L  
Sbjct: 120 ILSGE-PNELYVAQSGLTNGNGQPTTVQFESAKKQYVLENGQNQLIVQLTGRAPDGLLVT 178

Query: 170 RTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
           +T +   + Y   +   V NN+    + S   +I R +P T  + F V+    A +G   
Sbjct: 179 KTYTFHRDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHFYVRSYNGASMGSPQ 238

Query: 229 --LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHA 283
               +  Y  ++K +I    +S  W+ +   Y+ S ++P      +  + ++   S    
Sbjct: 239 TPYEKLSYESLDKQNIDRTSQS-GWIAMQQHYFLSAWVPGNPELTYHYYSHVIPASGEPN 297

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            Y   F + ++ +  G    T   L+ G +    +         P  E  ID+GW + I+
Sbjct: 298 VYVVGFVSPQMNVAAGSEAATHATLYVGPEIAKRLKGLA-----PGLERTIDYGWLWPIS 352

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +F ++S  + +V N+G +I++TT+ +K++F+  + K + S A M+ +QP+I  L+E+ 
Sbjct: 353 MLLFWILSAVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARMREMQPRIQALKERH 412

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                Q L +A ++LY+   INPL GC P+L+Q+PVF A Y VI  S+++R APF  WI 
Sbjct: 413 GD-DRQALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIESVQLRQAPFIFWIH 471

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DL+  DP                     I PIIM LSM  Q  +SP   D  Q  ++  +
Sbjct: 472 DLSVKDPYY-------------------ILPIIMGLSMLAQQWLSPTSPDPTQQKMMWIL 512

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
           PV+F     +FPAGL++YW  +NV+  +QQ  + K +
Sbjct: 513 PVIFTVFFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549


>gi|82779235|ref|YP_405584.1| putative inner membrane protein translocase component YidC
           [Shigella dysenteriae Sd197]
 gi|123561063|sp|Q329B2|OXAA_SHIDS RecName: Full=Inner membrane protein oxaA
 gi|81243383|gb|ABB64093.1| 60 KD inner-membrane protein [Shigella dysenteriae Sd197]
          Length = 548

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 139/572 (24%), Positives = 250/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ + P  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWSPHNDGTNN--FYTANLGNGIAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|33151313|ref|NP_872666.1| putative inner membrane protein translocase component YidC
           [Haemophilus ducreyi 35000HP]
 gi|38502923|sp|Q7VPM2|OXAA_HAEDU RecName: Full=Inner membrane protein oxaA
 gi|33147533|gb|AAP95055.1| 60 kDa inner-membrane protein [Haemophilus ducreyi 35000HP]
          Length = 536

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 144/566 (25%), Positives = 256/566 (45%), Gaps = 40/566 (7%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M  N +  V   + +S +I   WQ  +     E    ++   Q+   P+  + + A    
Sbjct: 1   MNSNRSLLVMGLLLVSFLIFTQWQQDFNP---EIQAQKQAQQQSRDVPHATNTANAIT-- 55

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
               + ++    + +++  L   I+  G    + +L  +   + S  P+  L +      
Sbjct: 56  ----EHMTKGKTITVESDVLRLVIDTLGGDVIESDLLAHKASLDSTDPLKLLTTEGLIYT 111

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
           A    +       +I         +  +         + + F+    +  +        Y
Sbjct: 112 AQSGLVGKNGIDTHIGRAPYQVTQDHFTLAKGQNEIVVPMTFEQDGVMYTKTFTLKRGSY 171

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
              +   + NNS + I   P G+I      ++ N         A    ++  ++   D  
Sbjct: 172 DVAVSFDIQNNSANTIEVQPYGQIKHSLLDSSGNLAMPTYTGGAYSSSETNYKKYSFDEM 231

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
             +  N      W+ +   Y+ S ++P+++ S     +  +         +     T+ P
Sbjct: 232 TKANLNIDTKGGWVALLQHYFVSAWVPNQDASNTLYSRTHNG---VATIGYRGPITTVKP 288

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
               T T+ L+ G K+   +            E+ +D+GW +FIAKP+F L+ + ++++G
Sbjct: 289 NTKTTITSQLWTGPKDQKEMAQAAT-----HLELTVDYGWAWFIAKPLFWLLIFIHSIIG 343

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G+AIM  T+ VK L +PL K QY S A M+ +QPK+ ELRE++     Q+  + M++L
Sbjct: 344 NWGLAIMGVTLVVKSLLYPLTKAQYTSMAKMRMLQPKLQELRERYGDDRQQM-SQEMMKL 402

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NP+ GC P++LQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP  IF    
Sbjct: 403 YKQEKVNPMGGCLPLILQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIF---- 458

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537
                          P++M LSMF+  KMSP   AD  Q  ++ +MPV+F      FP+G
Sbjct: 459 ---------------PVLMGLSMFLLQKMSPTAVADPTQLKVMTFMPVIFTVFFLWFPSG 503

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563
           L++YW  SN I+IVQQ +I +    +
Sbjct: 504 LVLYWLTSNCITIVQQWLIYRNLEKK 529


>gi|154706390|ref|YP_001423626.1| 60 kDa inner membrane protein [Coxiella burnetii Dugway 5J108-111]
 gi|189036347|sp|A9KBT1|OXAA_COXBN RecName: Full=Inner membrane protein oxaA
 gi|154355676|gb|ABS77138.1| 60 kDa inner membrane protein [Coxiella burnetii Dugway 5J108-111]
          Length = 566

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 135/577 (23%), Positives = 245/577 (42%), Gaps = 45/577 (7%)

Query: 1   MERNWNYFVAIA---LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +    L++ +  AWQ  Y          E+              ++    
Sbjct: 1   MDI-KRIILYVIVALLAIALFNAWQRDYPPTPKPTPTVEQPTANGDHPTAYTPPAFTPGA 59

Query: 58  IDDRAQA--------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
            +   +A        +  +  + ++   L   I+ +G       L  Y + +      V 
Sbjct: 60  AEKTKKAGTIALTSKVPEARLITVRTDVLDVEIDTQGGNIVSAKLPKYPVSLEEKQTPVQ 119

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           +LS       Y A+    +           +       +       ++L  +  + +L  
Sbjct: 120 ILSGE-PNELYVAQSGLTNGNGQPTTVQFESAKKQYVLENGQNQLIVQLTGRAPDGLLVT 178

Query: 170 RTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
           +T +   + Y   +   V NN+    + S   +I R +P T  + F V+    A +G   
Sbjct: 179 KTYTFHRDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHFYVRSYNGASMGSPQ 238

Query: 229 --LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHA 283
               +  Y  ++K +I    +S  W+ +   Y+ S ++P      +  + ++   S    
Sbjct: 239 TPYEKLSYESLDKQNIDRTSQS-GWIAMQQHYFLSAWVPGNPELTYHYYSHVIPASGEPN 297

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            Y   F + ++ +  G    T   L+ G +    +         P  E  ID+GW + I+
Sbjct: 298 VYVVGFVSPQMNVAAGSEAATHATLYVGPEIAKRLKGLA-----PGLERTIDYGWLWPIS 352

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +F ++S  + +V N+G +I++TT+ +K++F+  + K + S A M+ +QP+I  L+E+ 
Sbjct: 353 MLLFWILSSVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARMREMQPRIQALKERH 412

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                Q L +A ++LY+   INPL GC P+L+Q+PVF A Y VI  S+++R APF  WI 
Sbjct: 413 GD-DRQALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIESVQLRQAPFIFWIH 471

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DL+  DP                     I PIIM LSM  Q  +SP   D  Q  ++  +
Sbjct: 472 DLSVKDPYY-------------------ILPIIMGLSMLAQQWLSPTSPDPTQQKMMWIL 512

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
           PV+F     +FPAGL++YW  +NV+  +QQ  + K +
Sbjct: 513 PVIFTVFFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549


>gi|88705404|ref|ZP_01103115.1| Inner membrane protein oxaA [Congregibacter litoralis KT71]
 gi|88700494|gb|EAQ97602.1| Inner membrane protein oxaA [Congregibacter litoralis KT71]
          Length = 580

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 149/600 (24%), Positives = 266/600 (44%), Gaps = 71/600 (11%)

Query: 1   MERNWNYFVA--IALSVIIVYAWQNFYVYP----RIEEMNNERKNIQTVKQP-------- 46
           M+      +   + LS +++  W NF          E       + Q+  +P        
Sbjct: 1   MDIQRTLLIGAIMLLSFMLLTEWVNFKAVKDDVISTETRLTAGPDTQSSNKPITGMTDTG 60

Query: 47  ---------------------NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLK 85
                                  V  +      D  + + +    +++   SL  +I+LK
Sbjct: 61  DLPSAAAAPAVAEPTIGIEDIPAVGAAVDTSTEDTGSGSGNNGNIIQVYTDSLQLAIDLK 120

Query: 86  GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145
           G    ++ L  +  D+        LL  +N++  Y A+   +          +N      
Sbjct: 121 GGDIVEVALPKFLADIDDPDTPFVLL-ENNSRRVYVAQSGLIGKNGIDSKARANYQSTAS 179

Query: 146 SGKI-LTPTTPIKLVFKNANNILFERTI-SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM 203
             ++    T  + L + N   I   +    L + Y+  +   + N S +  + +  G+I 
Sbjct: 180 RYEMGAADTLEVDLTWSNDAGIEVTKRFRFLRDSYVVDVDFIINNQSSEAWQGNLFGQIK 239

Query: 204 RHKP-----QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKY 258
           R           +       G    + D    +  + D++       +    W+ +   Y
Sbjct: 240 RDSSAADSGGGGSMGMQPFLGAATTMPDDRFKKFSFEDMQDDPFREQNIG-GWIAMIQHY 298

Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318
           + S +IP+ E +     +  + G     A F++  + + PG     +   +AG K+  ++
Sbjct: 299 FLSAWIPNPEKTHTYSTRVTNSGFN--IAGFTSPAVVVAPGAQQEVSARFYAGPKDQYSL 356

Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378
                    P  E+ +D+GW +++A+P+F L++  + +VGN+G+AI+L TV +K +FF L
Sbjct: 357 QEIS-----PFLELSVDYGWLWWVAQPLFWLLTKIFAVVGNWGVAIILLTVLIKAVFFKL 411

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438
           +   Y S ANM+ +QPK+ ++RE++     Q   +AM++LYK   INP+ GC PIL+Q+P
Sbjct: 412 SATSYKSMANMRRVQPKMADIREQYADDK-QKQSQAMMELYKKEKINPMGGCLPILVQMP 470

Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           VF A+Y ++  S+E+RHAPF  WI DL+  DP                     + P++M 
Sbjct: 471 VFIALYWMLMESVELRHAPFMLWIDDLSVMDPYF-------------------VLPLMMG 511

Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            SMF   K++PPP D  QA I+ W+PV+F F    FPAGL++YW  +N++S+ QQ VI +
Sbjct: 512 ASMFFMQKLNPPPPDPMQAKIMQWLPVIFTFFFLWFPAGLVLYWVVNNLLSMAQQYVITR 571


>gi|88860620|ref|ZP_01135257.1| preprotein translocase [Pseudoalteromonas tunicata D2]
 gi|88817215|gb|EAR27033.1| preprotein translocase [Pseudoalteromonas tunicata D2]
          Length = 545

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 141/570 (24%), Positives = 238/570 (41%), Gaps = 38/570 (6%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME     F+ I L   S ++   W N Y   +    +   +     +         ++  
Sbjct: 1   MESQR-TFLFIGLLLVSFLLFQEWNNDYNPQQQAVQSASTQVKDATQSTGDTFIPSSSDS 59

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
                        + +    L   ++ KG    + +L  Y      + P + L     T 
Sbjct: 60  SVPGQIQRPSQSYISVTTDVLKVKLDTKGGDIVEADLIQYPEKQHGDVPFMLL--GEFTG 117

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNANNILFERTISLD 175
           N YF++   +             V++              I L + +   I F +T    
Sbjct: 118 NQYFSQSGLIGIDGPDASQQGRPVYSAEQQSYTLANDELRIPLTYVSDAGIEFVKTYVFK 177

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
              Y   +  T+ N S +        ++ R      +       GF     +K   +  +
Sbjct: 178 KGDYAVDVEYTINNKSANPATVQLFTQVKRTIQAKGSMVDQSYLGFAYGAFEKPYEKYSF 237

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           SDIE  ++S       ++     Y+ S ++P ++       + LSD  A           
Sbjct: 238 SDIEDKNLS-IDTQGGYISFIQHYFVSAWVPKQDEQNTIYSRKLSDNSAM--MGIKGPLT 294

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G+     +  + G K+   +     D       + +D+G  +FI++P+F L+ + Y
Sbjct: 295 TIEAGQQQQLASTYYMGPKDQEALKALHDD-----LHLTVDYGILWFISQPLFALLKWLY 349

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
            L+GN+G+AI+  T+ VK   +PL K QY S A M+N+QPKI  L+EK      Q   +A
Sbjct: 350 ALLGNWGLAIISITIIVKTFLYPLTKAQYTSMAKMRNLQPKIMALKEKH-GEDKQKFGQA 408

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M+++Y+   +NP+ GC+P+LLQ+P+F A++ V   S+E+RHA F  WI DL+A DP    
Sbjct: 409 MMEMYRKEKVNPMGGCFPLLLQMPIFLALFYVFLESVELRHAEFGLWIMDLSAKDPYY-- 466

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I PI+   SMF+  K+ P    D  Q  ++ +MPV+F      
Sbjct: 467 -----------------ILPILFGASMFLTQKLQPMTVTDPMQQKMMTYMPVIFSVFFLW 509

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+ISI Q  +I +    +
Sbjct: 510 FPSGLVLYWLVSNLISIAQMLIIYRGMEKK 539


>gi|50086619|ref|YP_048129.1| putative inner membrane protein translocase component YidC
           [Acinetobacter sp. ADP1]
 gi|49532593|emb|CAG70307.1| Inner membrane protein (IMP) integration factor; binds TM regions
           of nascent IMPs; required for Sec-independent IMP
           integration; associated with the Sec translocase
           [Acinetobacter sp. ADP1]
          Length = 583

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 138/585 (23%), Positives = 242/585 (41%), Gaps = 64/585 (10%)

Query: 11  IALSVIIVYAWQNFYVYPRIEEMNNERK------------NIQTVKQPNQVDNSYAAVLI 58
              + +++ AWQ  Y +                       +  T    + V  +  A   
Sbjct: 14  FVTAYLLILAWQKDYGHANTAVQPQAAAVVSHDVSADLPNSQSTAAASSDVPQANIAAQQ 73

Query: 59  DDRAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
              A + + S + + ++       IN KG     + L  +    +S+ P V L   S+ K
Sbjct: 74  TPAATSTAASQQLISIQTDLYHLWINPKGGDIVRIELLNHDQSKNSDQPFVML--ESDAK 131

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK---------------LVFKN 162
             Y A+   +             V+++                            +    
Sbjct: 132 RTYVAQSGLIGLNGPDSSRGGRPVFDVEKSAYTLTDAKETKDKDGKLVKTLTVPMVYKTT 191

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQE 218
               + +R       Y   +   V N S    +    G+I R   +         F +  
Sbjct: 192 DGVEIIKRFTFKQGDYPIVVSYQVVNRSPQNWQGQMFGQIKRDNSEDPGKSDQGIFTLGT 251

Query: 219 GFIAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK--ETSFHSQ 274
                 G       + K+++     ++       W+ +   Y+ S +IP    + ++ ++
Sbjct: 252 FLGGAWGTPEEHYNKLKFANFSDEKLN-VEAKGGWVAMVQHYFVSAWIPGHFGDQAYTAK 310

Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
            +            F++  I +  GK++T     ++G K    +               +
Sbjct: 311 LESRKSADNMNIIGFTSPTINVPAGKTMTVDATFYSGPKIQSELKDLAV-----GLNQTV 365

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           D+GW + IAK +F+ + +F+N+VGN+G +I+L TV VKL+ +PL+ K Y S A M+ I P
Sbjct: 366 DYGWLWPIAKLLFIGLQFFHNIVGNWGWSIILLTVLVKLILWPLSSKSYRSMAKMRVIAP 425

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           ++  ++E+F         + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+E+R
Sbjct: 426 EMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELR 484

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
           HAP+  WI+DL+A DP                     I P++M  +MFIQ  ++P PAD 
Sbjct: 485 HAPWMLWIQDLSAMDPWF-------------------ILPLLMGATMFIQQMLNPQPADP 525

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            QA +   MP++F   +  FPAGL++YW  +N I+I QQ  I K 
Sbjct: 526 MQAKVFRIMPIIFTVFMLFFPAGLVLYWIVNNTITITQQWFINKS 570


>gi|118582022|ref|YP_903272.1| 60 kDa inner membrane insertion protein [Pelobacter propionicus DSM
           2379]
 gi|166975879|sp|A1AV44|OXAA_PELPD RecName: Full=Inner membrane protein oxaA
 gi|118504732|gb|ABL01215.1| protein translocase subunit yidC [Pelobacter propionicus DSM 2379]
          Length = 542

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 147/561 (26%), Positives = 251/561 (44%), Gaps = 26/561 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           ME      +A+ LS+ + Y +   +      ++  +  +     V     V         
Sbjct: 1   ME--KRTLLAVILSITVFYVFSLLFAPEKKPVQPESTGQAVSAPVSAGQPVAGGVQPSAS 58

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                A +    V ++          +G     L L+ Y      ++  V L S ++   
Sbjct: 59  APSLPATAQQQDVTVRTGLYTAVFCSRGGALKSLTLKNYREKNLPDAQAVVLGSDADPSA 118

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EH 177
                    ++  N+                      +     +       +  +   + 
Sbjct: 119 L---TFSTRASGFNLPEGAPFVADATAVTMAGGEKKQLVFTHNSGQGFTVRKIYTFSGDS 175

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y  K+   V NN    +  + +  +       A ++    E   + L   + +E      
Sbjct: 176 YGIKLDTQVFNNMAVPLVGTVQQVMTYPGLVKAKDS--RFETAGSYLFSDNSLESDKLKD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
             S+   + ++  W G +DKY+ +  +    +    + +   +G    ++  S+  IT+ 
Sbjct: 234 VSSASKLYDKNLQWSGFADKYFLTAILSEGGSIASVELR--KNGAGFLESTVSSPRITVT 291

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
           PG+S+T  + LF G K+   +            E  +D GWF  IAKP+   + YFY  V
Sbjct: 292 PGQSVTVVHRLFVGPKDIDILKAQGNS-----LEQSLDLGWFTVIAKPLLYTLKYFYRYV 346

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
           GN+G+AI++ T+ +K LFFPL  K Y S  +M+ IQP +  L+EK+K    + + KA+++
Sbjct: 347 GNYGVAIIIITIILKALFFPLTHKSYKSMKDMQKIQPMMAALKEKYKD-DREGMNKAVME 405

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LY+ H +NPL GC P+L+QIPVFFA+YK +  S+E+RHAPF+ WI DL+  D      LF
Sbjct: 406 LYRDHKVNPLGGCLPMLVQIPVFFALYKALMFSIELRHAPFYFWITDLSGPD-----NLF 460

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537
           G +         +G  P++M  +MFIQ KM+P   D  QA ++  +PVVF F   +FP+G
Sbjct: 461 GQMLGLP---FVIGPLPLLMGATMFIQQKMTPSTMDPMQAKMMLALPVVFTFMFLNFPSG 517

Query: 538 LIIYWSWSNVISIVQQAVIMK 558
           L++YW  +N+++I QQ  I K
Sbjct: 518 LVLYWLLNNILTIGQQMYINK 538


>gi|30065013|ref|NP_839184.1| putative inner membrane protein translocase component YidC
           [Shigella flexneri 2a str. 2457T]
 gi|30043274|gb|AAP18995.1| 60 KD inner-membrane protein [Shigella flexneri 2a str. 2457T]
          Length = 548

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 139/572 (24%), Positives = 250/572 (43%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y
Sbjct: 51  GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T  L 
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +   V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A
Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++M    KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGVTMLFIQKMSPTTVTDPMQQKIMTFMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533


>gi|307246347|ref|ZP_07528425.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307255333|ref|ZP_07537145.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307259783|ref|ZP_07541503.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306852757|gb|EFM84984.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306861720|gb|EFM93702.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866173|gb|EFM98041.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 533

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 138/554 (24%), Positives = 252/554 (45%), Gaps = 32/554 (5%)

Query: 11  IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPR 70
           + +S +I   WQ  +     E    ++   Q        D   A+      A+  +    
Sbjct: 4   LLVSFLIFTQWQQDFNP---EIQAQKQAQQQAQVASQSGDVPAASNANTVIAENATQGKT 60

Query: 71  VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130
           V L++  L  +I+  G      +L  ++ +++S +P   L + + T  A    +      
Sbjct: 61  VTLQSDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATTYVAQSGLVGKNGID 120

Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190
            N   P      +            + + F+    +  +  +     Y   +   V N +
Sbjct: 121 TNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFVLKRGSYDVAVNFNVKNQT 180

Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250
              +   P G+I     +++ +         A    ++  ++      + +  + +    
Sbjct: 181 AATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDMEKANLDINTKAG 240

Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310
           W+ +   Y+ S ++P+++       +  +         +     TI P    T T+ L+ 
Sbjct: 241 WVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGPVTTIAPNSEATITSQLWT 297

Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370
           G K+   +     +      ++ +D+GW +FIAKP+F L+++  ++V N+G+AI+  T+ 
Sbjct: 298 GPKDQKEMEATAAN-----LDLTVDYGWVWFIAKPLFALLTFIQSIVTNWGLAIIGVTIV 352

Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430
           VK + +PL K QY S A M+ +QPKI E+RE+F     Q + + M++LYK   +NP+ GC
Sbjct: 353 VKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMSQEMMKLYKEEKVNPMGGC 411

Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
            PIL+Q+P+F A+Y     ++E+RHAPF+GWI+DL+A DP                    
Sbjct: 412 LPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------------------ 453

Query: 491 GIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
            I P++M  SMF+  KMSP P  D  Q  ++ +MPV+F      FP+GL++YW  SN+I+
Sbjct: 454 -ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSGLVLYWLTSNIIT 512

Query: 550 IVQQAVIMKMHGAE 563
           IVQQ +I +    +
Sbjct: 513 IVQQWLIYRNLEKK 526


>gi|307250692|ref|ZP_07532629.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307257502|ref|ZP_07539268.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306857300|gb|EFM89419.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306864014|gb|EFM95931.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 533

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 138/554 (24%), Positives = 252/554 (45%), Gaps = 32/554 (5%)

Query: 11  IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPR 70
           + +S +I   WQ  +     E    ++   Q        D   A+      A+  +    
Sbjct: 4   LLVSFLIFTQWQQDFNP---EIQAQKQAQQQAQVASQSGDVPAASNANTVIAENATQGKT 60

Query: 71  VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130
           V L++  L  +I+  G      +L  ++ +++S +P   L + + T  A    +      
Sbjct: 61  VTLQSDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATTYVAQSGLVGKNGID 120

Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190
            N   P      +            + + F+    +  +  +     Y   +   V N +
Sbjct: 121 TNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFVLKRGSYDVAVNFNVKNQT 180

Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250
              +   P G+I     +++ +         A    ++  ++      + +  + +    
Sbjct: 181 AATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDMEKANLDINTKAG 240

Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310
           W+ +   Y+ S ++P+++       +  +         +     TI P    T T+ L+ 
Sbjct: 241 WVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGPVTTIAPNSEATITSQLWT 297

Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370
           G K+   +     +      ++ +D+GW +FIAKP+F L+++  ++V N+G+AI+  T+ 
Sbjct: 298 GPKDQKEMEATAAN-----LDLTVDYGWAWFIAKPLFALLTFIQSIVTNWGLAIIGVTIV 352

Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430
           VK + +PL K QY S A M+ +QPKI E+RE+F     Q + + M++LYK   +NP+ GC
Sbjct: 353 VKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMSQEMMKLYKEEKVNPMGGC 411

Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
            PIL+Q+P+F A+Y     ++E+RHAPF+GWI+DL+A DP                    
Sbjct: 412 LPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------------------ 453

Query: 491 GIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
            I P++M  SMF+  KMSP P  D  Q  ++ +MPV+F      FP+GL++YW  SN+I+
Sbjct: 454 -ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSGLVLYWLTSNIIT 512

Query: 550 IVQQAVIMKMHGAE 563
           IVQQ +I +    +
Sbjct: 513 IVQQWLIYRNLEKK 526


>gi|146328851|ref|YP_001209838.1| preprotein translocase subunit YidC [Dichelobacter nodosus
           VCS1703A]
 gi|146232321|gb|ABQ13299.1| preprotein translocase subunit YidC [Dichelobacter nodosus
           VCS1703A]
          Length = 544

 Score =  331 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 143/573 (24%), Positives = 259/573 (45%), Gaps = 43/573 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+ N    +    + +    WQ + V  R  E++     +    Q  +   +        
Sbjct: 1   MKGNLRVVLYTLAAGLFFILWQRWQVANRPVEVS---PTLPVASQTVKKTETLDQQPPIS 57

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            ++      RV +K   L  + + +GA   +  L  Y   + + SP+  L + + ++  +
Sbjct: 58  ASETSEAPDRVRVKTDVLDIAFSTQGASIVEAKLLNYAFTIDNKSPLTLLHAENPSRMVF 117

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTT----PIKLVFKNANNILFERTISL-D 175
            + L    + +    PN  + W     + + P       +   +++ + + F +T +   
Sbjct: 118 QSGLV---SQSGTTAPNHFSQWKSAQKEYVLPDDAEHISVPFTWEDEHGVRFTKTFTFHR 174

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN--TFGVQEGFIAVLGDKSLVEQK 233
             Y F+I +TV N S    +     +I   +              G +    +    + +
Sbjct: 175 GTYRFEIEETVENQSERPWQGFAYRQIAFGEAAKMGGLGQVATFTGAVTSSEENRYNKIE 234

Query: 234 YSDIEKSSISNFHE--SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
             DI  +  +  +E     W+ +   Y+ +  +P          +Y +     +      
Sbjct: 235 LKDIASAKKAKLNEVTQTGWVAMMQHYFLAAVVPQSGVENRLYTQYDNGD---HIVGTHD 291

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
            E+TI P  +    +  + G K    +         P  +  ID+G+ + I++ MF +M+
Sbjct: 292 KEVTIAPRDTHHFKSTGYIGPKISKNLSAIA-----PYLDKTIDYGYLFMISQLMFHVMT 346

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           + Y ++GN+G AI++ T+ +K LFF  +   Y S A M+ +QP+I+ L+ ++     Q  
Sbjct: 347 FIYTVIGNWGGAIIVMTLLIKCLFFVPSAWAYKSMAKMRALQPEINRLKAQY-GEDKQAF 405

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
            +AM+QLY+   +NP +GC P+LLQIP F A Y V++ S+E+RHAP+ GWI+DL++ DP 
Sbjct: 406 SQAMMQLYRDRKVNPASGCLPMLLQIPFFIAFYWVLAESVELRHAPWIGWIQDLSSMDPL 465

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531
                               I PII +  MF+Q K++PPP D  QA ++  MP+VF F  
Sbjct: 466 Y-------------------ILPIINAALMFLQQKLNPPPPDPTQAKVMMMMPLVFGFMF 506

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
             FP+GL++YW+ SN  SIVQQ V+ K +G  +
Sbjct: 507 MWFPSGLVLYWTMSNAFSIVQQYVMNKRYGQRV 539


>gi|288942814|ref|YP_003445054.1| membrane protein insertase, YidC/Oxa1 family domain-containing
           [Allochromatium vinosum DSM 180]
 gi|288898186|gb|ADC64022.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Allochromatium vinosum DSM 180]
          Length = 554

 Score =  331 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 145/573 (25%), Positives = 254/573 (44%), Gaps = 45/573 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKN------IQTVKQPNQVDN 51
           M+     F+ +AL+ ++      W   Y  P    +  E+        + +  +   V  
Sbjct: 1   MDNQR-LFLFLALAAVLFLIYESWMQDYGRPAQLPVAQEQAQGAPGVPVPSANEIPTVST 59

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
           +  AV       A      + ++   L   I+ +GA      L  Y +          LL
Sbjct: 60  TPGAVPDGATLSAALDETPIRVETDVLRLEISPRGATIASAWLLDYAVVPERPDDKFQLL 119

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILF 168
            P    N +  +   +    ++   +     +  S    +  T    + L + N   +  
Sbjct: 120 KPV-PPNMFVVQSGLLGEKPDLLPTHEAIFTSAQSQYALQPGTDRLDVTLEWTNDAGVRV 178

Query: 169 ERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLG 225
           ++  +     YL +    V N +   +      ++ R +      T       G +    
Sbjct: 179 KKIYTFTRGSYLIESRQVVENQTGAPLVARAYNQLQRTELYDPNETRFISTFTGGVYYSP 238

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           ++   +    DI K  +        W+ +   Y+ + ++P    +    F   +   +RY
Sbjct: 239 EEKYKKVSLEDIAKGKLDLTVTD-GWIAMMQHYFLAAWVP--PRAVAETFYTNALNGSRY 295

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
                +  ++I  G +    N LF G K   T+         P  E+ +D+GW   IAKP
Sbjct: 296 IIGKYSPPVSIASGATHAFENQLFVGPKLLSTLEDIA-----PGLELAVDYGWLTVIAKP 350

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           ++ ++S+ + +VGN+G AI++ T+ +KL F+ L++  Y S A+M+ I P++  L++++  
Sbjct: 351 IYWMLSWIHAVVGNWGWAIIVLTILIKLAFYKLSETSYRSMAHMRQITPRLQALKDRYGD 410

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q L +AM++LYKT  INPL GC PIL+QIPVF A+Y V+  S+EMR APF  W+ +L
Sbjct: 411 DK-QRLNQAMMELYKTEKINPLGGCLPILVQIPVFIALYWVLLESVEMRQAPFVLWLNNL 469

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525
           +A DP                     I P+IM +SMF+Q K++P P D  QA I+  +P 
Sbjct: 470 SAPDPYF-------------------ILPLIMGVSMFVQQKLNPAPPDPLQAKIMMSLPF 510

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           VF    + FP+GL++YW+ +N++SI QQ  I +
Sbjct: 511 VFTVFFAFFPSGLVLYWTVNNLLSIAQQWKITR 543


>gi|56461737|ref|YP_157018.1| preprotein translocase subunit YidC [Idiomarina loihiensis L2TR]
 gi|56180747|gb|AAV83469.1| Preprotein translocase subunit YidC [Idiomarina loihiensis L2TR]
          Length = 530

 Score =  331 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 139/541 (25%), Positives = 239/541 (44%), Gaps = 34/541 (6%)

Query: 28  PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPR-VELKNPSLIGSINLKG 86
           P          N +    P+      A V   D+      +   V ++   L   I+ +G
Sbjct: 11  PENVTSTQSSNNAENSDVPSGSSAVSADVPESDQPVVAQRAETTVHVRTDVLDVEIDTRG 70

Query: 87  AQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLI 145
                 +L  +     S      L + SN  N Y A+   +     + +    +  +   
Sbjct: 71  GDVVSTHLLKFAKTQGSEERFQLLQNSSN--NVYVAQSGLIGPDGIDGKDGRPSYNYEQE 128

Query: 146 SGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMR 204
           S +  +    + L +   N  ++ +  +     Y   +   V NN+   +     G++ R
Sbjct: 129 SYESTSEVIEVPLTYTAENGAVYRKVFTFTPGKYTVDVRYEVENNTSKTLETQFYGQLKR 188

Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKY-SDIEKSSISNFHESNSWLGISDKYWASVF 263
                 + +  +   F A         +KY  D  +    N      W+G+ + Y+ S +
Sbjct: 189 SVHSGESGSMIMPTYFGAAYSYDEDKFEKYDFDSMQDKKLNVTSQTGWVGMLEHYFVSAW 248

Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323
           +P +        +  +   A            I PG S T  + +F G K+   +     
Sbjct: 249 VPKQGQQNRLYSRVANGSQA--IIGVIYPMTDIQPGSSKTIESQVFLGPKDQDAMAEV-- 304

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
              +   ++ +D+G+ +++A+P+F L+ +  ++V N+G+AI+LTTV VK L FPL K QY
Sbjct: 305 ---VEYLDLTVDYGFLWWLAQPIFKLLQFLQSIVINWGLAIILTTVIVKALLFPLTKAQY 361

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
           VS A M+ +QPK+  LRE++     Q +  AM++LYK   +NPL GC P+LLQ+P+F A+
Sbjct: 362 VSMAKMRMLQPKMTALRERYGD-DRQKMSGAMMKLYKEEKVNPLGGCLPMLLQLPIFLAL 420

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           Y V+  S+E+RH+ F  WI+DL+  DP                     I PI+M  SMF+
Sbjct: 421 YWVLLESVELRHSAFVFWIQDLSTKDPYY-------------------ILPILMGASMFL 461

Query: 504 QMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
             ++ P P  D  Q  +  +MPV+F      FP+GL++YW  SN+I+I Q  +I +    
Sbjct: 462 MQRLQPTPTADPMQQKLFQYMPVIFTVFFLWFPSGLVLYWLVSNLITIAQMLIIYRGLEK 521

Query: 563 E 563
           +
Sbjct: 522 K 522


>gi|304398072|ref|ZP_07379947.1| membrane protein insertase [Pantoea sp. aB]
 gi|304354358|gb|EFM18730.1| membrane protein insertase [Pantoea sp. aB]
          Length = 548

 Score =  331 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 139/572 (24%), Positives = 244/572 (42%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N F+ IA   +    WQ +           +        Q  Q  NS A      
Sbjct: 1   MDSQRNLFL-IAFLFVTFMIWQAW---------QTDHAPQPQQTQTTQGTNSVAGDAASQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  +   + S+ P   L   +     Y
Sbjct: 51  GVPASGQGQTITVKTDVLSLNINTRGGDVEQAQLLTFPDKLGSDQPFQLL--ETTPAFLY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N        +              + + +   N +++ +T    
Sbjct: 109 QAQSGLTGRNGPDNPNNGARPLFNAAQNHFEMADGQSELRVPMTYTAENGVVYTKTFIFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGF--IAVLGDK 227
              Y   +   V N +   +  S  G++ +         T +N F +           + 
Sbjct: 169 RGEYAVNVDYHVNNTTQQPLEVSLFGQLKQTIDLPKHRDTGSNNFALHTFRGAAYSTSES 228

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N   SN W+ +  +Y+A+ ++P   T   +     + G+     
Sbjct: 229 KYEKYKFDTIADNENLNATTSNGWVAMLQQYFATAWVPR--TEGTNTLYTSNLGNGVAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  +TI  G        L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSAPVTIAAGAQQNLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF  WI DL+A
Sbjct: 402 -QKQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFVLWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGITMFFIQKMSPTTVTDPMQQKIMTYMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533


>gi|264680932|ref|YP_003280842.1| inner membrane insertion protein [Comamonas testosteroni CNB-2]
 gi|262211448|gb|ACY35546.1| inner membrane insertion protein [Comamonas testosteroni CNB-2]
          Length = 570

 Score =  331 bits (847), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 135/587 (22%), Positives = 244/587 (41%), Gaps = 50/587 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNERKNIQTVKQPNQVD 50
           M       + +     +V  W            F+  P+                  Q  
Sbjct: 1   MNDIRRTILWVIFGFSMVLLWDKWQIHNGKKPTFFPSPQTVSAPAAADVKPADVSVPQPA 60

Query: 51  NSYAAVLID-------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            + +A  +          A A++    V + +  +  + + +G       L  Y   V  
Sbjct: 61  AAASAGDVPGAANAAAQPAAAVTPRQDVIVGSDVMRLTFDSEGGTLKASELLKYSDTVD- 119

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
               +  +   N K  Y  +   +             +      K    +  ++    + 
Sbjct: 120 -DKKLMQVFEENAKRVYLGQTGLIGGNFPTHKTPMTVMPGERELKDGQDSVQVRFESADQ 178

Query: 164 NNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGF 220
             +   +T +L    Y   +   V N     +      +++R    P+  +  +    G 
Sbjct: 179 GGVKLVKTFTLKRGSYAVDVQHDVVNTGSAAVNPQLYMQLVRDGNKPEHESTFYSTFTGP 238

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                 K   + ++ DIE          SN ++ +   Y+AS ++ +      +  + + 
Sbjct: 239 AVYTEAKKYHKVEFKDIENGKAEVDKASSNGYVAMVQHYFASAWLLADGIQRDNFVRKV- 297

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
            G   Y         T+ PG++ T ++ LF+G +  P +         P  E++ D+GW 
Sbjct: 298 -GDNLYAVGMITPVGTVEPGQTKTVSSRLFSGPQVEPMLEKLS-----PGLELVKDYGWL 351

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             +AKP++ L+S  +  +GN+G +I+   V +K+ F+ L  K Y S A MK I P+I E+
Sbjct: 352 TILAKPLYWLLSELHKFIGNWGWSIVALVVLLKIAFYWLNAKAYSSMAKMKAINPRIQEM 411

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           RE+ K   PQ +Q+ M+++Y+   +NP+ GC PI++QIPVF A+Y V+  S+E+R+AP+ 
Sbjct: 412 RERLKD-KPQQMQQEMMRIYREEKVNPMGGCLPIVIQIPVFMALYWVLQSSVEIRNAPWI 470

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
           GWI DL+  DP                     I P++M+LS  +Q  ++P P D  QA +
Sbjct: 471 GWIHDLSVPDPFF-------------------ILPLLMTLSSLLQTALNPAPPDPMQAKM 511

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           +  MP++F      FP+GL++YW  +N++SI QQ +I K  G     
Sbjct: 512 MWIMPLMFSVMFFFFPSGLVLYWLTNNILSIAQQWIINKRMGVPPQF 558


>gi|308188769|ref|YP_003932900.1| Inner membrane protein yidC [Pantoea vagans C9-1]
 gi|308059279|gb|ADO11451.1| Inner membrane protein yidC [Pantoea vagans C9-1]
          Length = 548

 Score =  331 bits (847), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 139/572 (24%), Positives = 244/572 (42%), Gaps = 53/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N F+ IA   +    WQ +           +        Q  Q  NS A      
Sbjct: 1   MDSQRNLFL-IAFLFVTFMIWQAW---------QTDHAPQPQQTQTTQGTNSVAGDTASQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  +   + S+ P   L   +     Y
Sbjct: 51  GVPASGQGQTITVKTDVLSLNINTRGGDVEQAQLLTFPDKLGSDQPFQLL--ETTPAFLY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N        +              + + +   N +++ +T    
Sbjct: 109 QAQSGLTGRNGPDNPNNGARPLFTTAQDHFEMADGQSELRVPMTYTAENGVVYTKTFIFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGF--IAVLGDK 227
              Y   +   V N +   +  S  G++ +         T +N F +           + 
Sbjct: 169 RGEYAVNVDYHVNNTTQQPLEVSLFGQLKQTIDLPKHRDTGSNNFALHTFRGAAYSTSES 228

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N   SN W+ +  +Y+A+ ++P   T   +     + G+     
Sbjct: 229 KYEKYKFDTIADNENLNATTSNGWVAMLQQYFATAWVPR--TEGTNTLYTSNLGNGVAAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  +TI  G        L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKSAPVTIAAGAQQNLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF  WI DL+A
Sbjct: 402 -QKQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFILWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 461 QDPYY-------------------ILPILMGITMFFIQKMSPTTVTDPMQQKIMTYMPVI 501

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533


>gi|323700637|ref|ZP_08112549.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp.
           ND132]
 gi|323460569|gb|EGB16434.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio
           desulfuricans ND132]
          Length = 555

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 144/582 (24%), Positives = 238/582 (40%), Gaps = 50/582 (8%)

Query: 1   ME--RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           ME        +A+ LS I+++ WQ        ++    RK  +  ++   +         
Sbjct: 1   MEKKEQIRLVIALVLSFIVLFGWQYLTGPSAEQKAEMARKAAEAEQKTAALTQKTQDAAE 60

Query: 59  DDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
             +  A       +    V +  P        +G   +   L+ Y   +  +SP V L+ 
Sbjct: 61  LAKEAAPVADFVPTDGVSVTVDTPLYTAVFTSQGGVLEKFILKNYRETIQKDSPFVDLVG 120

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF--KNANNILFER 170
           P+         +  ++             ++     +        L F  +     +   
Sbjct: 121 PNAFAKGPLGLILTLNDKEYHTWKRGKWAFSGSDLTLAEGDGTKTLTFTGQVDGYRIERV 180

Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230
                + YL     TVTN +      +              + +   +  IA L   +  
Sbjct: 181 LTFHPDTYLIDESATVTNLTGTGAEGALSFTAAAKSMSDEDDRYNPTK--IAYLTKDTRK 238

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
           E    D  K           W  I   Y+    IP  E                      
Sbjct: 239 EMTDRDDLKKDGITAPADLKWGAIESNYFLFAVIPGGE-----NASLSGGVQDDIFRMAV 293

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
            ++ T +P  + T     F G  +   ++    D         +++GWF F+AKP+ + +
Sbjct: 294 TDKATFMPNVAKTLKTSYFVGPTDRKMLNAMPND-----LADAVNFGWFDFLAKPLLVGL 348

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
           ++FY  VGN+G+AI++ TV +KL+F+PL++K Y S   MK +QP + +LREK+     Q 
Sbjct: 349 NFFYGFVGNYGVAIIILTVIIKLIFWPLSQKSYGSMEKMKKLQPMVAKLREKYGDDK-QR 407

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WI 462
           L +  + LYKT+ +NP+ GC P+++QIPVFF +YK +  ++E+RHAPF          W+
Sbjct: 408 LNQETMALYKTYKVNPMGGCLPMVVQIPVFFGLYKALLGAVELRHAPFIAHLPFTDLPWL 467

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DL+A DP  I                    PIIM  SMF+Q KM+P   D  Q  I+  
Sbjct: 468 ADLSAKDPYYIS-------------------PIIMGASMFLQQKMTPSAGDPTQQKIMLI 508

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           MP+VF F    FP+GL+IYW ++N++SI QQ +I +    + 
Sbjct: 509 MPLVFTFMFLQFPSGLVIYWLFNNLLSIGQQLMIARKSRVKT 550


>gi|121611909|ref|YP_999716.1| 60 kDa inner membrane insertion protein [Verminephrobacter eiseniae
           EF01-2]
 gi|121556549|gb|ABM60698.1| protein translocase subunit yidC [Verminephrobacter eiseniae
           EF01-2]
          Length = 567

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 128/590 (21%), Positives = 239/590 (40%), Gaps = 53/590 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYP-------------------RIEEMNNERKNIQ 41
           M       + +     ++  W  + V+                         + +  ++ 
Sbjct: 1   MNDIRRSVLWVIFGFSMILLWDKWQVHNGNRALFFPAPAPTAPAASAGARPASADAAHVP 60

Query: 42  TVKQPNQVDNSYAAVLIDDRAQALSMS-PRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
                   D       +  +  A+ ++  RV+++      + + +G       L  +   
Sbjct: 61  APAAGASPDAVPGQPAVSGQPAAVPVARERVQVQTDLYRLTFDSQGGSLTHAELLEHADM 120

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
                    LL   + +  Y A+   +  +          +              I+   
Sbjct: 121 ADKTRRF--LLLDESAQRVYVAQTGLIGGSFPTHKTPMTALPGPRELAEGANELAIRFES 178

Query: 161 KNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQ 217
            +   +   +T +L    Y   +   V N     +      +++R    P   ++ +   
Sbjct: 179 PSQGGLKLVKTWTLRRGSYAIAVRHEVVNTGSATVSPQLYLQLVRDGNKPPGESSFYSTF 238

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFK 276
            G       K   + ++ DIE   +    E  + ++ +   Y+A+ ++ +         +
Sbjct: 239 TGPAVYTDAKKYQKIEFKDIENDKVDIPKEAPDGYVAMVQHYFATAWLLADGVQRQPFTR 298

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
            +      Y         +I PG S T    LFAG +    +         P  E++ D+
Sbjct: 299 KVD--TNLYSVGMLTPLGSIAPGASRTLDARLFAGPQVETMLETLS-----PGLELVKDY 351

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           GW   +AKP++ L+   + L+ N+G +I+   + +K+ F+ L  K Y S A MK I PKI
Sbjct: 352 GWLTILAKPLYWLLEQLHKLLRNWGWSIVGLVLLLKIAFYWLNAKAYASMAKMKAINPKI 411

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
            E+RE+ K   PQ +Q+ M+++Y+   +NP+ GC+PI++QIPVF A+Y V+  S+EMR+A
Sbjct: 412 MEMRERLKD-KPQQMQQEMMRIYREEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMRNA 470

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+ GWI DL+  DP                     I P++M+ S  +Q  ++P P D  Q
Sbjct: 471 PWIGWIHDLSTPDPLF-------------------ILPLLMTASSLLQTALNPAPPDPMQ 511

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           A ++ +MP++F      FPAGL++YW  +N++SI QQ +I    G     
Sbjct: 512 AKMMWFMPLIFSVMFFFFPAGLVLYWLTNNILSIAQQWIINTRMGVPPQF 561


>gi|299530924|ref|ZP_07044338.1| inner membrane insertion protein [Comamonas testosteroni S44]
 gi|298721145|gb|EFI62088.1| inner membrane insertion protein [Comamonas testosteroni S44]
          Length = 570

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 134/587 (22%), Positives = 243/587 (41%), Gaps = 50/587 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNERKNIQTVKQPNQVD 50
           M       + +     +V  W            F+  P+                  Q  
Sbjct: 1   MNDIRRTILWVIFGFSMVLLWDKWQIHNGKKPTFFPSPQTVSAPAAADVKPADVSVPQPA 60

Query: 51  NSYAAVLID-------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            + +A  +          A A++    V + +  +  + + +G       L  Y   V  
Sbjct: 61  AAASAGDVPGAANAAAQPAAAVTPRQDVIVGSDVMRLTFDSEGGTLKASELLKYSDTVD- 119

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
               +  +   N K  Y  +   +             +      K    +  ++    + 
Sbjct: 120 -DKKLMQVFEENAKRVYLGQTGLIGGNFPTHKTPMTVMPGERELKDGQDSVQVRFESADQ 178

Query: 164 NNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGF 220
             +   +T +L    Y   +   V N     +      +++R    P+  +  +    G 
Sbjct: 179 GGVKLVKTFTLKRGSYAVDVQHDVVNTGSAAVNPQLYMQLVRDGNKPEHESTFYSTFTGP 238

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                 K   + ++ DIE         S   ++ +   Y+AS ++ +      +  + + 
Sbjct: 239 AVYTDAKKYHKVEFKDIESGKAEVDKASPNGFVAMVQHYFASAWLLADGIQRDNFVRKV- 297

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
            G   Y         T+ PG++ T ++ LF+G +  P +         P  E++ D+GW 
Sbjct: 298 -GDNLYAVGMITPVGTVEPGQTKTVSSRLFSGPQIEPMLEKLS-----PGLELVKDYGWL 351

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             +AKP++ L+S  +  +GN+G +I+   V +K+ F+ L  K Y S A MK I P+I E+
Sbjct: 352 TILAKPLYWLLSELHKFIGNWGWSIVALVVLLKIAFYWLNAKAYSSMAKMKAINPRIQEM 411

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           RE+ K   PQ +Q+ M+++Y+   +NP+ GC PI++QIPVF A+Y V+  S+E+R+AP+ 
Sbjct: 412 RERLKD-KPQQMQQEMMRIYREEKVNPMGGCLPIVIQIPVFMALYWVLQSSVEIRNAPWI 470

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
           GWI DL+  DP                     I P++M+LS  +Q  ++P P D  QA +
Sbjct: 471 GWIHDLSVPDPFF-------------------ILPLLMTLSSLLQTALNPAPPDPMQAKM 511

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           +  MP++F      FP+GL++YW  +N++SI QQ +I K  G     
Sbjct: 512 MWIMPLMFSVMFFFFPSGLVLYWLTNNILSIAQQWIINKRMGVPPQF 558


>gi|284007059|emb|CBA72334.1| inner membrane protein [Arsenophonus nasoniae]
          Length = 545

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 138/573 (24%), Positives = 252/573 (43%), Gaps = 56/573 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IA   +    WQ +           E    Q +K    V         D 
Sbjct: 1   MDSQRNL-LFIAWLFVSFLIWQTW-----------ESDKTQPIKTDQIVKQMDMPSHDDQ 48

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                  +  + +K   L   IN +G   D  +L  Y  ++ S+ P   L +  +    Y
Sbjct: 49  ANLGHEQAKFITVKTDVLELRINTRGGDIDGADLLLYPKELHSSDPFRLLETSKD--FIY 106

Query: 121 FAELDYVSTANNIELPNSN-------TVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
            A+   +          +N       +     + +       + L F   + +++++   
Sbjct: 107 QAQSGLIGQDGPDNPGYNNGLRPLYLSTATSYALQDGQDELRVPLTFTGKDGVVYQKVYV 166

Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227
           L    Y   +   + N S   +  +  G++ +      +  T +N F +     A     
Sbjct: 167 LKRGKYNISVEYNIDNKSAKPLSLAFFGQLKQTVELPKERDTGSNNFALHTYRGAAYSSD 226

Query: 228 SLVEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
               +KY       +  N +    W+ +  +Y+A+ +IP       + F  +    A   
Sbjct: 227 ETNYKKYSFSDITDNNLNVNSKGGWIAMLQQYFATAWIP--GYQNQNTFYTIDLDKAIAI 284

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
             + ++ IT+        T+ L+ G +    +         P  ++ +D+GW +FI++P+
Sbjct: 285 IGYKSSPITVAANSKENYTSTLWVGPELQAEMAAVA-----PHLDLTVDYGWLWFISQPL 339

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+ + +  +GN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  ++E+    
Sbjct: 340 FKLLKFIHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMKERIGDD 399

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q + + M+ LYK   +NPL GC P+L+Q+P+F A+Y ++  S+E+RHAPF GWI+DL+
Sbjct: 400 K-QRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFIGWIQDLS 458

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
           A DP                     I P++M L+M+I  KMSP    D  Q  I+ +MPV
Sbjct: 459 AQDPYY-------------------ILPLLMGLTMYIIQKMSPTTVTDPMQQKIMTYMPV 499

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 500 IFTVFFLWFPSGLVLYYIVSNLVTIIQQQIIYR 532


>gi|85712624|ref|ZP_01043671.1| Preprotein translocase subunit YidC [Idiomarina baltica OS145]
 gi|85693615|gb|EAQ31566.1| Preprotein translocase subunit YidC [Idiomarina baltica OS145]
          Length = 554

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 137/576 (23%), Positives = 241/576 (41%), Gaps = 42/576 (7%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNN-------ERKNIQTVKQPNQVDN 51
           M    +  +   I +S  +   W                     E +N  TV Q      
Sbjct: 1   MNSPRSILLVAFIVVSFFLFQQWTIDTAPGTKAPQQTQQTTQQTEDQNSSTVPQSGSNTA 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
             A    +      S    + +    L   I+L G       L  +   + S      L 
Sbjct: 61  DTAVPESNSPNAITSNGRLITVVTDELELKIDLNGGDIVSAKLLEFAATLDSEERFQLL- 119

Query: 112 SPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170
              N+ + Y A+   +     +     +         ++   T  + L  +  + +   +
Sbjct: 120 -KRNSNHIYIAQSGLIGPQGIDSNNGRAQYQAAQERYRLTGDTLEVPLTTQTESGLNVTK 178

Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
           T  +   HY   +   + N S +  +    G++ +      + +  +   F A       
Sbjct: 179 TFVIKRGHYDIGVNYAIENQSSEAAQLQFYGQLQQTMTAGESGSMIMPTYFGAAYSQDED 238

Query: 230 VEQKYS-DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             +KY  D  +    +      W+ +   Y+ + ++P++       F        +    
Sbjct: 239 KFEKYPFDDMREKKLSVTTQTGWVSMLQHYFVAAWVPTQTQQNK--FYSQVTPSNQAVIG 296

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                 T+ PG S T    +F G K+   +         P  ++ +D+G+ +++A+P+F 
Sbjct: 297 VLYPSTTVQPGASKTIDATIFVGPKDQDAMAKVA-----PYLDLTVDYGFLWWLAQPIFK 351

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+ +  + V N+G+AI+L TV +K L FPL K QYVS A M+ +QPK+  LRE++     
Sbjct: 352 LLQFLQSFVINWGLAIILITVIIKALLFPLTKAQYVSMAKMRLLQPKMKSLRERYGD-DR 410

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q + +AM++LYK   +NPL GC P+LLQ+P+F ++Y V+  S+E+RH+ F  WI+DL+  
Sbjct: 411 QKMGQAMMKLYKEEKVNPLGGCLPMLLQLPIFLSLYWVLLESVELRHSSFVFWIQDLSTK 470

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527
           DP                     I PI+M +SMF+  ++ P P  D  Q  +  +MPV+F
Sbjct: 471 DPYY-------------------ILPILMGISMFVMQRLQPTPATDPMQQKLFQYMPVIF 511

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                 FP+GL++YW  SN+I+I Q  +I K    +
Sbjct: 512 TVFFLWFPSGLVLYWLVSNLITITQMLIIYKGLEKK 547


>gi|239906118|ref|YP_002952857.1| inner membrane protein OxaA [Desulfovibrio magneticus RS-1]
 gi|259515664|sp|C4XNJ6|OXAA_DESMR RecName: Full=Inner membrane protein oxaA
 gi|239795982|dbj|BAH74971.1| inner membrane protein OxaA [Desulfovibrio magneticus RS-1]
          Length = 532

 Score =  330 bits (846), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 144/570 (25%), Positives = 247/570 (43%), Gaps = 51/570 (8%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             N    +A+ALS+ ++  W   +  P  +    +    Q          + AA      
Sbjct: 1   MENKRVILAVALSLAVLVGWNFLF-PPAKQAPKPDAAVSQQDAPAQSSPAAPAAKAETLA 59

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
           A A +   R+ +  P     +N  G   +   L+ Y   +  +SP+V L+       A  
Sbjct: 60  AFAPTPGKRITIDTPLYTAVLNSTGGVLEQFALKNYRETIKPDSPLVNLIDDKAKAKAPL 119

Query: 122 AELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVFKNANNILFERTISLDEHY 178
             +       N      N  W+   G           + L  +  + ++        + Y
Sbjct: 120 GIIL------NGSPTWQNVDWSAEGGDLKLEAGAAGTVVLAGRMGDVVVKRELTFSGDSY 173

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
           +     +++NN    +R      +   +   A +++   +          L      D +
Sbjct: 174 IIDEKFSLSNNGGAPLRNRLSLTVAVDRLSAADDSYNPTQAAFYGASGLDLE---SGDKK 230

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
            +      +   W  +   Y+    +P                   ++     + + +  
Sbjct: 231 LAEGVAPEKPMEWGAVMSNYFLVGIVPEAADLRG----KAKLEDGVFRVALDKDGLEVPA 286

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
           G     +   F G K    +     ++A  +    ID+GWF F+AKP+  L+ +FY+ VG
Sbjct: 287 GGRSDLSIAYFLGPKVPKYL-----EMAPHKLVASIDYGWFDFVAKPLIKLLHFFYDYVG 341

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G+AI+L T+ +KL+F+PL++K Y S   MK +QP + +LREK+K    Q + + M+QL
Sbjct: 342 NYGVAIILLTILIKLIFWPLSQKSYKSMDQMKKLQPLLTQLREKYKD-DRQKMNEEMMQL 400

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIKDLAAADP 470
           YKT+ +NP  GC P+++QIPVFF +Y+ +  S+E+RHA F          W+ DL+A DP
Sbjct: 401 YKTYKVNPAGGCLPMIVQIPVFFGLYQALLHSIELRHASFITHLPFTNMIWLADLSAKDP 460

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I P+IM  +MF+Q KM+P P D  QA ++ +MPV+F F 
Sbjct: 461 FY-------------------ITPLIMGATMFLQQKMTPAPGDPTQAKVMLFMPVIFTFM 501

Query: 531 LSSFPAGLIIYWSWSNVISIVQQ-AVIMKM 559
             +FP+GL++YW  +NVISI QQ  ++ K 
Sbjct: 502 FLNFPSGLVVYWLVNNVISIAQQGWMLNKK 531


>gi|22127984|ref|NP_671407.1| putative inner membrane protein translocase component YidC
           [Yersinia pestis KIM 10]
 gi|45443732|ref|NP_995271.1| putative inner membrane protein translocase component YidC
           [Yersinia pestis biovar Microtus str. 91001]
 gi|51598232|ref|YP_072423.1| inner membrane protein translocase component YidC [Yersinia
           pseudotuberculosis IP 32953]
 gi|108810137|ref|YP_654053.1| putative inner membrane protein translocase component YidC
           [Yersinia pestis Antiqua]
 gi|108814119|ref|YP_649886.1| putative inner membrane protein translocase component YidC
           [Yersinia pestis Nepal516]
 gi|145601170|ref|YP_001165246.1| putative inner membrane protein translocase component YidC
           [Yersinia pestis Pestoides F]
 gi|150260964|ref|ZP_01917692.1| probable membrane protein [Yersinia pestis CA88-4125]
 gi|153949944|ref|YP_001403098.1| inner membrane protein translocase component YidC [Yersinia
           pseudotuberculosis IP 31758]
 gi|162421152|ref|YP_001608452.1| putative inner membrane protein translocase component YidC
           [Yersinia pestis Angola]
 gi|165926088|ref|ZP_02221920.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939954|ref|ZP_02228491.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166009619|ref|ZP_02230517.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213212|ref|ZP_02239247.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401618|ref|ZP_02307112.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167422864|ref|ZP_02314617.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425533|ref|ZP_02317286.1| inner membrane protein OxaA [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170026450|ref|YP_001722955.1| putative inner membrane protein translocase component YidC
           [Yersinia pseudotuberculosis YPIII]
 gi|186897490|ref|YP_001874602.1| putative inner membrane protein translocase component YidC
           [Yersinia pseudotuberculosis PB1/+]
 gi|218931078|ref|YP_002348953.1| putative inner membrane protein translocase component YidC
           [Yersinia pestis CO92]
 gi|229839809|ref|ZP_04459968.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229841894|ref|ZP_04462050.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229896771|ref|ZP_04511934.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia
           pestis Pestoides A]
 gi|229904659|ref|ZP_04519770.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia
           pestis Nepal516]
 gi|270488370|ref|ZP_06205444.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Yersinia pestis KIM D27]
 gi|38503118|sp|Q8Z9U3|OXAA_YERPE RecName: Full=Inner membrane protein oxaA
 gi|21961130|gb|AAM87658.1|AE014013_3 60 kDa inner-membrane protein [Yersinia pestis KIM 10]
 gi|45438602|gb|AAS64148.1| probable membrane protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51591514|emb|CAH23186.1| Oxa1 family transporter [Yersinia pseudotuberculosis IP 32953]
 gi|108777767|gb|ABG20286.1| protein translocase subunit yidC [Yersinia pestis Nepal516]
 gi|108782050|gb|ABG16108.1| protein translocase subunit yidC [Yersinia pestis Antiqua]
 gi|115349689|emb|CAL22670.1| probable membrane protein [Yersinia pestis CO92]
 gi|145212866|gb|ABP42273.1| protein translocase subunit yidC [Yersinia pestis Pestoides F]
 gi|149290372|gb|EDM40449.1| probable membrane protein [Yersinia pestis CA88-4125]
 gi|152961439|gb|ABS48900.1| inner membrane protein OxaA [Yersinia pseudotuberculosis IP 31758]
 gi|162353967|gb|ABX87915.1| inner membrane protein OxaA [Yersinia pestis Angola]
 gi|165912080|gb|EDR30720.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165921948|gb|EDR39125.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991541|gb|EDR43842.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205510|gb|EDR49990.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166958256|gb|EDR55277.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049000|gb|EDR60408.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055547|gb|EDR65340.1| inner membrane protein OxaA [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169752984|gb|ACA70502.1| 60 kDa inner membrane insertion protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186700516|gb|ACC91145.1| 60 kDa inner membrane insertion protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|229678777|gb|EEO74882.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia
           pestis Nepal516]
 gi|229691233|gb|EEO83286.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229696175|gb|EEO86222.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229700209|gb|EEO88245.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia
           pestis Pestoides A]
 gi|270336874|gb|EFA47651.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Yersinia pestis KIM D27]
 gi|320017432|gb|ADW01004.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 546

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 139/571 (24%), Positives = 246/571 (43%), Gaps = 52/571 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ + V    +      +        ++   +        
Sbjct: 1   MDSQRNLLL-IALLFVSFMIWQAWQVDNNPQPTAQTTQQTTNTATGDKASQAVPGS---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +K   L  +IN +G   +  NL  Y   + S++    L   +     Y
Sbjct: 56  -----GQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDTLGSSNTFELL--ETTPSFVY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N +     +               I L F + +  +F +T  L 
Sbjct: 109 QAQSGLTGKNGPDNPANGDRPLFEVPQTSFVLADGQDELRIPLTFTSKDGSVFIKTFVLK 168

Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
            +     +   V N S   +  +  G++ +      K  T +N F +Q    A       
Sbjct: 169 RNDYAIGVDYHVNNASAAPLELTLFGQLKQSINLPKKRDTGSNNFALQTYRGAAYSSDET 228

Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             +KY     +    +      W+ +  +Y+A+ +IP+      + F     G+      
Sbjct: 229 KYKKYSFSDIEDKNLDITTKGGWVAMLQQYFATAWIPAANE--TNTFYSAELGNGLAAIG 286

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
           F    + I PG+    +  L+ G +    +         P  ++ +D+GW +FI++P+F 
Sbjct: 287 FKGAPVVIQPGEQKQLSATLWVGPEIQNKMAEIA-----PHLDLTVDYGWLWFISQPLFK 341

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      
Sbjct: 342 LLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK- 400

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q + + M+ LYK   +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A 
Sbjct: 401 QRMSQEMMALYKAEKVNPLGGCLPLIIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQ 460

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527
           DP                     I PI+M ++M+   KMSP    D  Q  I+ +MPV+F
Sbjct: 461 DPYY-------------------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIF 501

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                 FPAGL++Y+  SN+++I+QQ +I +
Sbjct: 502 TVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 532


>gi|307261914|ref|ZP_07543574.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306868385|gb|EFN00202.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 533

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 138/554 (24%), Positives = 252/554 (45%), Gaps = 32/554 (5%)

Query: 11  IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPR 70
           + +S +I   WQ  +     E    ++   Q        D   A+      A+  +    
Sbjct: 4   LLVSFLIFTQWQQDFNP---EIQAQKQAQQQAQVASQSGDVPAASNANTVIAENATQGKT 60

Query: 71  VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130
           V L++  L  +I+  G      +L  ++ +++S +P   L + + T  A    +      
Sbjct: 61  VTLQSDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATTYVAQSGLVGKNGID 120

Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190
            N   P      +            + + F+    +  +  +     Y   +   V N +
Sbjct: 121 TNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFVLKRGSYDVAVNFNVKNQT 180

Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250
              +   P G+I     +++ +         A    ++  ++      + +  + +    
Sbjct: 181 AATVEVQPYGQIKYTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDMEKANLDINTKAG 240

Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310
           W+ +   Y+ S ++P+++       +  +         +     TI P    T T+ L+ 
Sbjct: 241 WVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGPVTTIAPNSEATITSQLWT 297

Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370
           G K+   +     +      ++ +D+GW +FIAKP+F L+++  ++V N+G+AI+  T+ 
Sbjct: 298 GPKDQKEMEATAAN-----LDLTVDYGWAWFIAKPLFALLTFIQSIVTNWGLAIIGVTIV 352

Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430
           VK + +PL K QY S A M+ +QPKI E+RE+F     Q + + M++LYK   +NP+ GC
Sbjct: 353 VKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMSQEMMKLYKEEKVNPMGGC 411

Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
            PIL+Q+P+F A+Y     ++E+RHAPF+GWI+DL+A DP                    
Sbjct: 412 LPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------------------ 453

Query: 491 GIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
            I P++M  SMF+  KMSP P  D  Q  ++ +MPV+F      FP+GL++YW  SN+I+
Sbjct: 454 -ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSGLVLYWLTSNIIT 512

Query: 550 IVQQAVIMKMHGAE 563
           IVQQ +I +    +
Sbjct: 513 IVQQWLIYRNLEKK 526


>gi|93007297|ref|YP_581734.1| putative inner membrane protein translocase component YidC
           [Psychrobacter cryohalolentis K5]
 gi|92394975|gb|ABE76250.1| protein translocase subunit yidC [Psychrobacter cryohalolentis K5]
          Length = 564

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 129/583 (22%), Positives = 242/583 (41%), Gaps = 55/583 (9%)

Query: 7   YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL-------- 57
             +A+ + + +++ AW++ Y      +   E         P+    +    +        
Sbjct: 9   IIIAMLITAYLLILAWRDDYADAPAVDTVPETAASVGADIPSTSGAAGDIPVQTLPVDNG 68

Query: 58  ---IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
                  A   + +  + +        IN +G       L+ Y   + S+ P V L   +
Sbjct: 69  TVDSAVTATPATDAGLITVTTDRYDIKINPEGGDIVYAALKQYDATLDSDKPFVLL--EN 126

Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANNILFER 170
           N+   Y A+   +     I+       ++  +   +       L     +K     + + 
Sbjct: 127 NSNRVYVAQSGLIGQNG-IDTAEGRAKYSHTANNYVMEKGQQTLSVPLTYKKDGVTVTKT 185

Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT------FGVQEGFIAVL 224
                + Y   I   + N S    +     ++ R   +    +           G     
Sbjct: 186 FTFTHDKYPIDISYKIQNASTAAWQGQMFAQLKRDDSKDPGMSDKGALSMATYLGGAWGT 245

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
            D    + K+       ++       W+GI   Y+ S + P     F  +F     G   
Sbjct: 246 PDDPYNKLKFGKFNDGELTTT-SDKGWVGIVQHYFVSAWTPEN---FTGKFFSRETGDDY 301

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           +   F++  + + P K +T    L+AG K    +               +D+G  + I+K
Sbjct: 302 F-IGFNSQPVNVAPNKQVTLNATLYAGPKVQSELKDVAV-----GLNQTVDYGLLWPISK 355

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
            +F ++   + ++GN+G +I+L T+ VKL     + K Y S A M+ I P++  L+E+  
Sbjct: 356 ILFGILDGIHKVIGNWGWSIILLTILVKLALMWFSNKSYYSMAKMRAIAPRLAALKEEHG 415

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               ++  + M+ +YK   +NP+AGC PIL+Q+P+F A+Y V+  S+E+RHAP+  WI+D
Sbjct: 416 DDRMKM-SQEMMAMYKEEKVNPMAGCLPILMQMPIFLALYWVLVESVELRHAPWILWIQD 474

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+A DP                     I P++M  SMFIQ +++P PAD  QA ++ ++P
Sbjct: 475 LSAMDPWF-------------------ILPLLMGASMFIQQQLNPQPADPMQAKVMKFLP 515

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
           ++F   +  FPAGL++YW+ +N+ S+  Q ++ K    E  L 
Sbjct: 516 IIFTAFMLFFPAGLVLYWTVNNLFSMTHQYIVNKKVEEEQKLR 558


>gi|332531205|ref|ZP_08407118.1| membrane protein insertase, yidc/oxa1 family domain containing
           [Hylemonella gracilis ATCC 19624]
 gi|332039312|gb|EGI75725.1| membrane protein insertase, yidc/oxa1 family domain containing
           [Hylemonella gracilis ATCC 19624]
          Length = 571

 Score =  330 bits (845), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 147/597 (24%), Positives = 246/597 (41%), Gaps = 63/597 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQN----------FYVYP-----------RIEEMNNERKN 39
           M       + +     IV  W            F+  P               ++ +   
Sbjct: 1   MNDIRRTILWVIFGFSIVLLWDQWQIHNGRPATFFPSPTAAVAKPVAPAEQTPVSAQNPE 60

Query: 40  IQTVKQPNQVDNSYAAVLIDDRAQALSM--SPRVELKNPSLIGSINLKGAQFDDLNLRGY 97
           +   +Q            I   AQA+S     RV +    L  + + +G          +
Sbjct: 61  VPQARQLATTGVDGGVAAIQAAAQAVSSLPRERVTVSTDVLKLTFDTEGGSLVRSEFLRH 120

Query: 98  HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157
           H      +P+V  L   +    Y ++   +      +LP   TV  L+S +         
Sbjct: 121 HESHDVQTPVV--LFDESKDRVYLSQTGLI---GGADLPTHKTVMKLVSSERELRDGADT 175

Query: 158 LVFKN-----ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP--QTA 210
           L  +          L +        Y   +   V N   + +      +++R        
Sbjct: 176 LKVQFESPVSGGVQLLKTYTLQRGSYAVDVKHEVRNVGQESVTPQVYLQLVRDGNKIPGG 235

Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKET 269
           ++ +    G       K   +  + DIEK       ES N ++ +   Y+AS ++ +   
Sbjct: 236 SSFYSTFTGPAVYTEAKKYHKVDFGDIEKGKADFDKESTNGYVAMVQHYFASAWLLADGV 295

Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329
                 + +S+    Y     A    + PG +      LF G +E   +         P 
Sbjct: 296 QREIFVRKVSNN--LYAVGMIAPLQALAPGATRVLDARLFVGPQEEKQLEALA-----PG 348

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            E++ D+GW   +AKP++ L+   ++L+ N+G +I+   V +K+ F+ L  K Y S A M
Sbjct: 349 LELVKDYGWLTILAKPLYWLLDKLHDLLHNWGWSIVALVVLLKIAFYWLNAKAYASMAKM 408

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           K I P+I E+R++ K   PQ +Q+ M+++Y+   +NPL GC PI++QIPVF A+Y V+  
Sbjct: 409 KAIAPRITEMRDRLKD-KPQQMQQEMMRIYRDEKVNPLGGCLPIMIQIPVFIALYWVLLS 467

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S+EMR+AP+  WIKDL+  DP                     I P++M+L+  +Q  ++P
Sbjct: 468 SVEMRNAPWILWIKDLSTQDPYY-------------------ILPLLMTLTTMLQTALNP 508

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
            P D  QA ++  MP+VF      FPAGL++YW  +NV+SI QQ VI K  G     
Sbjct: 509 APPDPMQAKLMWIMPLVFSVMFFFFPAGLVLYWVTNNVLSIAQQWVINKRMGVPPQF 565


>gi|29655205|ref|NP_820897.1| inner membrane protein oxaA [Coxiella burnetii RSA 493]
 gi|161830140|ref|YP_001597736.1| inner membrane protein oxaA [Coxiella burnetii RSA 331]
 gi|30581048|sp|P45650|OXAA_COXBU RecName: Full=Inner membrane protein oxaA
 gi|189036348|sp|A9NBA5|OXAA_COXBR RecName: Full=Inner membrane protein oxaA
 gi|29542477|gb|AAO91411.1| 60 kDa inner membrane protein [Coxiella burnetii RSA 493]
 gi|161762007|gb|ABX77649.1| Inner membrane protein oxaA [Coxiella burnetii RSA 331]
          Length = 566

 Score =  330 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 135/576 (23%), Positives = 244/576 (42%), Gaps = 44/576 (7%)

Query: 2   ERNWNYFVAIA---LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
                  + +    L++ +  AWQ  Y          E+              ++     
Sbjct: 1   MDIKRIILYVIVALLAIALFNAWQRDYPPTPKPTPTVEQPTANGDHPTAYTPPAFTPGAA 60

Query: 59  DDRAQA--------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
           +   +A        +  +  + ++   L   I+ +G       L  Y + +      V +
Sbjct: 61  EKTKKAGTIAFTSKVPEARLITVRTDVLDVEIDTQGGNIVSAKLPKYPVSLEEKQTPVQI 120

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170
           LS       Y A+    +           +       +       ++L  +  + +L  +
Sbjct: 121 LSGE-PNELYIAQSGLTNGNGQPTTVQFESEKKQYVLENGQNQLIVQLTGRAPDGLLVTK 179

Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS- 228
           T +   + Y   +   V NN+    + S   +I R +P T  + F V+    A +G    
Sbjct: 180 TYTFHRDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHFYVRSYNGASMGSPQT 239

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHAR 284
              +  Y  ++K +I    +S  W+ +   Y+ S ++P      +  + ++   SD    
Sbjct: 240 PYEKLSYESLDKQNIDRTSQS-GWIAMQQHYFLSAWVPGNPELTYHYYSHVIPASDEPNV 298

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y   F + ++ +  G    T   L+ G +    +         P  E  ID+GW + I+ 
Sbjct: 299 YVVGFVSPQMNVAAGSEAATHATLYVGPEIAKRLKGLA-----PGLERTIDYGWLWPISM 353

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
            +F ++S  + +V N+G +I++TT+ +K++F+  + K + S A M+ +QP+I  L+E+  
Sbjct: 354 LLFWILSAVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARMREMQPRIQALKERHG 413

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               Q L +A ++LY+   INPL GC P+L+Q+PVF A Y VI  S+++R APF  WI D
Sbjct: 414 D-DRQALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIESVQLRQAPFIFWIHD 472

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+  DP                     I PIIM LSM  Q  +SP   D  Q  ++  +P
Sbjct: 473 LSVKDPYY-------------------ILPIIMGLSMLAQQWVSPTSPDPTQQKMMWILP 513

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
           V+F     +FPAGL++YW  +NV+  +QQ  + K +
Sbjct: 514 VIFTVFFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549


>gi|262281558|ref|ZP_06059337.1| preprotein translocase subunit YidC [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257017|gb|EEY75756.1| preprotein translocase subunit YidC [Acinetobacter calcoaceticus
           RUH2202]
          Length = 586

 Score =  330 bits (844), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 136/588 (23%), Positives = 238/588 (40%), Gaps = 67/588 (11%)

Query: 11  IALSVIIVYAWQNFYVYPRIEEMNNERK-----------NIQTVKQPNQVDNSYAAVLID 59
              + +++ AWQ  Y                        N +     + V  +  A    
Sbjct: 14  FVTAYLLILAWQKDYGNAATAPQKQAAAVSSHEVSADLPNAKNATVASDVPQANIAQSQT 73

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A A      + ++       IN KG     + L  +     S+ P V L + S     
Sbjct: 74  TDATAPVNQQLISVQTDLYHIWINPKGGDIVRIELLSHDKSKDSDQPFVMLENDSK--RT 131

Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164
           Y A+   +             ++                   G+         +      
Sbjct: 132 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQKGQSEKVLNVPMVFKTPEG 191

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220
             + +        Y   +   V N S    +    G++ R         +   F +    
Sbjct: 192 VEIIKTFTFTQGQYPIVVRHQVINRSQQSWQGQMFGQLKRDNSDDPGKSSQGIFTLGTFL 251

Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271
               G       + K+++  +  +S       W+ I   Y+ S +IP       +    +
Sbjct: 252 GGAWGTPESHYNKLKFANFSEEKVS-TEAKGGWVAIVQHYFVSAWIPGNLKLTQANGQPY 310

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            ++ +            F++  I +  G S+     L++G K    +             
Sbjct: 311 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQAELKDLAV-----GLN 365

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+GW + IAK +F+ + +F+++VGN+G +I+L TV VK++ +PL+ K Y S A M+ 
Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTVMVKMILWPLSSKSYRSMAKMRV 425

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           I P++  ++E+F         + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+
Sbjct: 426 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+RHAP+ GWI+DL+A DP                     I P+IM ++MF+Q  ++P P
Sbjct: 485 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGVTMFVQQMLNPQP 525

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           AD  QA +   MP++F   +  FPAGL++YW  +N I+I+QQ+ I K 
Sbjct: 526 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINKS 573


>gi|163803611|ref|ZP_02197477.1| putative inner membrane protein translocase component YidC [Vibrio
           sp. AND4]
 gi|159172605|gb|EDP57463.1| putative inner membrane protein translocase component YidC [Vibrio
           sp. AND4]
          Length = 540

 Score =  329 bits (843), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 140/570 (24%), Positives = 245/570 (42%), Gaps = 42/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         E+    +        +    V    
Sbjct: 1   MDSQRN-ILLIALALVSFMLFQKWQVAKNPAPQAIEQAQSSSTLPAPSFADELDPVPGQQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           +A A      + +    L  SI+  G      NL  Y  ++ S+ P V L       + +
Sbjct: 60  QASA----KTITVTTDVLTLSIDTLGGDVVHANLNKYSAELDSSDPFVLLKDTKG--HQF 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176
            A+   V          +   + + +     P    +L     F        +  +    
Sbjct: 114 IAQSGLVGPQGIDLSSTNRPSYKVSADSFTLPDGQDELRVPMTFTANGIEYIKTYVFERG 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   + NNS +         + ++      + T     G      D    +  + 
Sbjct: 174 SYALNVEYDIVNNSGNNATLGMYAHLRQNLMDDGGSITMPTYRGGAYSTEDVRYKKYSFD 233

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S        W  +   Y+A+ +IP  E   +   + + +              
Sbjct: 234 DMQDRNLSINLADGKGWAAMIQHYFAAAWIPRDEPGTNLYTRVIGNLGD---IGVRIPNK 290

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G   T    L+ G K    +         P  ++++D+GW +F+AKP+  L+++  
Sbjct: 291 TIATGDQTTFKATLWVGPKLQNEMAAVA-----PNLDLVVDYGWLWFLAKPLHSLLAFIQ 345

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+GIAI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 346 SFVGNWGIAIVCLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC P++LQ+P+F ++Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 405 MMELYKKEKVNPLGGCLPLVLQMPIFISLYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M +SMFI  KMSP    D  Q  I+ +MP++F F    
Sbjct: 463 -----------------ILPVLMGVSMFIIQKMSPTTVTDPMQQKIMTFMPLMFTFFFFM 505

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKSLEKK 535


>gi|89902989|ref|YP_525460.1| 60 kDa inner membrane insertion protein [Rhodoferax ferrireducens
           T118]
 gi|89347726|gb|ABD71929.1| protein translocase subunit yidC [Rhodoferax ferrireducens T118]
          Length = 571

 Score =  329 bits (843), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 132/594 (22%), Positives = 235/594 (39%), Gaps = 57/594 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M       + +     +V  W  +         +              +     P  V  
Sbjct: 1   MNDIRRTILWVIFGFSMVLLWDQWQVFNGHKATFFPSASNTAATAHPPVPASSVPAGVPT 60

Query: 52  SYAAV-----------LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
           +               L      + +   R+ +    L  + + +GA         +   
Sbjct: 61  ANTVAAAAQMTGAAAGLTSTTDASAAAHERLVVTTDVLKLTFDTEGASVVQTEFVRHADM 120

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
              +   V L   SN  + Y A+   ++ A     P   TV  +  G+        +LV 
Sbjct: 121 ADKSKHFVLL--ESNKDHTYMAQTGLIAGAAGGTFPTHKTVMTVAPGERTLQEGSNQLVI 178

Query: 161 KN-----ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNT 213
           +          L +        Y   +   V N     +      +++R    P   +  
Sbjct: 179 RFESPELGGVKLVKTFTLTRGTYAVAVKHEVVNVGTAAVSPQLYLQLVRDGTKPLGESKF 238

Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFH 272
           +    G       K   +  + DIE + +       + ++ +   Y+AS ++        
Sbjct: 239 YSTFTGPAIYTEAKKYQKVDFKDIENNKVDVEKTAESGYVAMVQHYFASAWLLGDGIKRD 298

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
              + +      Y          I PG S +     FAG +E   +         P  E+
Sbjct: 299 LFLRKVD--TNLYAVGMITPMDNIAPGASKSVEARFFAGPQEEKVLEALA-----PGLEL 351

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           + D+GW   +AKP++ L+    + +GN+G +I+   + +K  F+ L  K Y S A MK +
Sbjct: 352 VKDYGWLTILAKPLYWLLHAIESFLGNWGWSIVALVLLLKAAFYWLNAKAYASMAKMKAV 411

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
            PK+ E+RE+ K +P Q+ Q+ M+++Y+   +NP+ GC+PI++QIPVF A+Y V+  S+E
Sbjct: 412 NPKVTEMRERLKDNPQQM-QQEMMRIYREEKVNPMGGCFPIMIQIPVFIALYWVLLASVE 470

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           MR+AP+  WI DL++ DP                     I P++M+L+  +Q  ++P P 
Sbjct: 471 MRNAPWILWIHDLSSPDPFY-------------------ILPLVMTLTTVLQTSLNPAPP 511

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           D  QA ++ +MP+ F      FPAGL++YW  +N++SI QQ +I    G     
Sbjct: 512 DPMQAKMMWFMPLAFSVMFFFFPAGLVLYWITNNILSIAQQWLINTRMGVPPKF 565


>gi|315128186|ref|YP_004070189.1| preprotein translocase; inner membrane protein (IMP) integration
           factor; binds TM regions of nascent IMPs; required for
           Sec-independent IMP integration; associated with the
           with SecYEG and SecDFyajC translocase [Pseudoalteromonas
           sp. SM9913]
 gi|315016699|gb|ADT70037.1| preprotein translocase; inner membrane protein (IMP) integration
           factor; binds TM regions of nascent IMPs; required for
           Sec-independent IMP integration; associated with the
           with SecYEG and SecDFyajC translocase [Pseudoalteromonas
           sp. SM9913]
          Length = 544

 Score =  329 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 134/570 (23%), Positives = 244/570 (42%), Gaps = 39/570 (6%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME     F+ I L   S ++   W N Y  P+ +     +       + +    + +   
Sbjct: 1   MESQR-TFLFIGLMLVSFLLFQEWNNDYNTPKADPSATTQTLKANSPESDDYVPASSDSG 59

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
           +   +  L+    +++        I+ KG    + +L  Y     S+ P + L       
Sbjct: 60  LPA-STTLAKRSVIDITTDVFKVKIDTKGGDIVETDLINYKETKGSDVPYMLLGEFDG-- 116

Query: 118 NAYFAELDYVSTANNIELPNSNTVWN--LISGKILTPTTPIKLVFKNANNILFERTISL- 174
             YF++   +         N    +     S  +      + L F ++N + F +T    
Sbjct: 117 KQYFSQSGLIGLNGPDASANGRPTYQSEQTSYTLTGDELRVPLQFTDSNGVSFTKTYVFK 176

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
              Y   +   V N +   ++     +I R   +  +       G      ++   +  +
Sbjct: 177 KGQYDVGLEYKVNNTTSAPVQVQLYTQIKRTVQEKGSMVDQNYLGAAYGTDEEPYEKYSF 236

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           SD+      N +    ++     Y+ S ++P ++ +       L               +
Sbjct: 237 SDM-ADKNLNINTQGGYVAFIQHYFVSAWVPMQDQANT--LYSLITKSNAAIIGVKDEAV 293

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
            +  G     T   + G KE   +     D      ++ +D+GW +FI++P+F+L+ + +
Sbjct: 294 NVQAGSEQVLTATYYMGPKESDKLEAIHTD-----LDLTVDYGWLWFISQPLFVLLKWLH 348

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           +++GN+G+AI+  T+ VK L +PL K QY S A M+ +QPK+  L+EK+     Q   +A
Sbjct: 349 SILGNWGVAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMKALKEKYGD-DRQKFGQA 407

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
            +++Y+   +NP+ GC+PILLQ+P+F A++ V   S E+RHA F  W+ DL+A DP    
Sbjct: 408 TMEMYRKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFVLWLTDLSAKDPYY-- 465

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            + PI+   SMFI  K+ P    D  Q  ++ +MPV+F      
Sbjct: 466 -----------------VLPILFGASMFITQKLQPMTVTDPMQQKMMTFMPVIFSVFFLW 508

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+ISIVQ  +I +    +
Sbjct: 509 FPSGLVLYWLVSNLISIVQMLIIYRGMEKK 538


>gi|17544723|ref|NP_518125.1| inner membrane protein translocase component YidC [Ralstonia
           solanacearum GMI1000]
 gi|38503108|sp|Q8Y3H6|OXAA_RALSO RecName: Full=Inner membrane protein oxaA
 gi|17427012|emb|CAD13532.1| putative preprotein translocase subunit yidc transmembrane
           [Ralstonia solanacearum GMI1000]
          Length = 553

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 150/577 (25%), Positives = 244/577 (42%), Gaps = 49/577 (8%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVD 50
           M+      + +  S+ +V     WQ        F+  P+                  +  
Sbjct: 1   MDI-KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTVTTTAAAPGGTPAGDVPKAA 59

Query: 51  NSYAAVLIDDRAQ----ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
              AA      A         S ++ +    +  +++  GA    L L         +  
Sbjct: 60  APAAAGSQAAPATGAVSQTPASEKIVVTTDVIRATVDTAGAIVTKLELL----TQKDHDG 115

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
              +L   + +  Y A    +   +        T               + L        
Sbjct: 116 NPMVLFDRSLERTYLARSGLIG-GDFPNHTTVFTASAGPRDLGTGGEVSLTLTADKGGAK 174

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLG 225
           L +  +     Y+      VTN+    I  +    + R       +  +    G      
Sbjct: 175 LAKTYVFKRGSYVIDTRFDVTNDGAAPINPTLYMELARDGGAVEQSRFYSTFTGPAVYTD 234

Query: 226 DKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
                +  ++DI+KS         + W+ +   Y+AS +IP+       +F         
Sbjct: 235 TDHYHKITFADIDKSKAHVPAPTDSGWVAMVQHYFASAWIPAASA--KREFYVDRIDTNF 292

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y+        T+ PG S++ T  LFAG +E   +         P  E++ D+GW   IAK
Sbjct: 293 YRVGMQQALGTVAPGASVSATARLFAGPQEERMLEGIT-----PGLELVKDYGWLTIIAK 347

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L+   + L+GN+G +I+  TV VKL+FFPL+   Y S A MK++QP++  +RE+ K
Sbjct: 348 PLFWLLEKIHKLLGNWGWSIVALTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHK 407

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
              PQ + + M+ LY+T  +NPL GC PI++QIPVF A+Y V+  S+EMR AP+ GW+ D
Sbjct: 408 G-DPQKMNQEMMTLYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWVHD 466

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           LA+ DP                     I PI+M++SMF+Q +++P P D  QA ++ +MP
Sbjct: 467 LASPDPFY-------------------ILPILMAVSMFVQTRLNPTPPDPVQAKMMMFMP 507

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           + F      FPAGL++YW  +N +SI QQ  I +M G
Sbjct: 508 IAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 544


>gi|221069751|ref|ZP_03545856.1| YidC translocase/secretase [Comamonas testosteroni KF-1]
 gi|220714774|gb|EED70142.1| YidC translocase/secretase [Comamonas testosteroni KF-1]
          Length = 570

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 135/587 (22%), Positives = 245/587 (41%), Gaps = 50/587 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNER-------KNIQTV 43
           M       + +     +V  W            F+  P+                  Q  
Sbjct: 1   MNDIRRTILWVIFGFSMVLLWDKWQIHNGKKPTFFPSPQTVSAPAAADAKPADVSVPQPA 60

Query: 44  KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
              +  D   AA      A A++    V + +  +  + + +G       L  Y     +
Sbjct: 61  AAASAGDVPGAANAAGQPAAAVTPRQDVTVGSDVMRLTFDSEGGTLKHSELLKYSDT--A 118

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
           +   +  +   N K  Y  +   +             +      K    +  ++    + 
Sbjct: 119 DDKKLMQVFEENAKRVYLGQTGLIGGNFPTHKTPMTVMPGERELKDGQDSVQVRFESADQ 178

Query: 164 NNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGF 220
             +   +T +L    Y   +   V N     +      +++R    P+  ++ +    G 
Sbjct: 179 GGVKLVKTFTLKRGSYAVDVQHDVVNTGSAAVNPQLYMQLVRDGNKPEHESSFYSTFTGP 238

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                 K   + ++ DIE         S   ++ +   Y+AS ++ +      +  + + 
Sbjct: 239 AVYTDAKKYHKVEFKDIESGKAEVDKASPNGFVAMVQHYFASAWLLADGIQRDNFVRKV- 297

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
            G   Y         T+ PG++ T ++ LF+G +  P +         P  E++ D+GW 
Sbjct: 298 -GDNLYAVGMITPVGTVEPGQTKTVSSRLFSGPQIEPMLEKLS-----PGLELVKDYGWL 351

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             +AKP++ L+S  +  +GN+G +I+   V +K+ F+ L  K Y S A MK I P+I E+
Sbjct: 352 TILAKPLYWLLSELHKFIGNWGWSIVALVVLLKIAFYWLNAKAYSSMAKMKAINPRIQEM 411

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           RE+ K   PQ +Q+ M+++Y+   +NP+ GC PI++QIPVF A+Y V+  S+E+R+AP+ 
Sbjct: 412 RERLKD-KPQQMQQEMMRIYREEKVNPMGGCLPIIIQIPVFMALYWVLQSSVEIRNAPWI 470

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
           GWI DL+  DP                     I P++M+LS  +Q  ++P P D  QA +
Sbjct: 471 GWIHDLSVPDPFF-------------------ILPLLMTLSSLLQTALNPAPPDPMQAKM 511

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           +  MP++F      FP+GL++YW  +N++SI QQ +I K  G     
Sbjct: 512 MWIMPLMFSVMFFFFPSGLVLYWLTNNILSIAQQWIINKRMGVPPQF 558


>gi|317154269|ref|YP_004122317.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316944520|gb|ADU63571.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 554

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 139/575 (24%), Positives = 231/575 (40%), Gaps = 46/575 (8%)

Query: 1   ME--RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV------KQPNQVDNS 52
           ME        +A+ALS I+++ WQ        E+    RK ++           +     
Sbjct: 1   MEKKEQIRLVIALALSFIVIFGWQYLMAPSAEEQAEVARKAVEAERRAVALSSQSDAAGV 60

Query: 53  YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
             A  +       +    V +  P      N +G   +   L+ Y   +  +SP V L+ 
Sbjct: 61  TQAHGVPAGDFIATAGVAVTVDTPLYTAVFNSQGGILEKFILKNYRETIKPDSPNVDLIG 120

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
            +         +                 +   +  +        L F   +        
Sbjct: 121 ANAFAKGPLGLILTAGDKEFHTWQRGEWAFAGSNLALGEGDGVKTLTFSGQSGDFRIERT 180

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
              +   + I ++    ++                  +          +A L      E 
Sbjct: 181 LTFDPATYHITESAMVTTLGNTGVEGAVSFTAAAKSMSAEDDSYNPTKVAYLSADGREEM 240

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
              D  K +         W  +   Y+    IP+ E+         +             
Sbjct: 241 SDRDDLKETGITSPSGLKWGAVESNYFLFAIIPASES-----ATLSAGVQDDIFRMAVNE 295

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
           + T LP  + T     F G  +   +            E  +D+GWF F+AKP+ + +++
Sbjct: 296 DATFLPNVTKTVKASYFLGPTDRDMLATMPNQ-----LEKAVDFGWFDFLAKPLLIGLNF 350

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
           FY+ V N+GIAI+L T+ +KL+F+PL+++ Y S   MK +QP + +LREK+     Q L 
Sbjct: 351 FYDYVHNYGIAIILLTIVIKLIFWPLSQRSYASMEQMKKLQPMVQKLREKYGDDK-QRLN 409

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIKD 464
           +  + LYKT+ +NP+ GC P+++QIPVFF +YK +  ++E+RHAPF          W+ D
Sbjct: 410 QETMALYKTYKVNPMGGCLPMVVQIPVFFGLYKALLGAVELRHAPFIANVPFTDLPWLAD 469

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+A DP                     + P+IM  +MF+Q KM+P   D  Q  I+  MP
Sbjct: 470 LSAKDPYY-------------------VTPLIMGATMFLQQKMTPSAGDPTQQKIMMLMP 510

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           VVF F    FP+GL+IYW  +NV+SI QQ +I++ 
Sbjct: 511 VVFTFMFLQFPSGLVIYWLLNNVLSIGQQLLIVRS 545


>gi|54307240|ref|YP_128260.1| putative inner membrane protein translocase component YidC
           [Photobacterium profundum SS9]
 gi|81697579|sp|Q6LW55|OXAA_PHOPR RecName: Full=Inner membrane protein oxaA
 gi|46911660|emb|CAG18458.1| Putative inner membrane protein, 60 kDa [Photobacterium profundum
           SS9]
          Length = 538

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 136/569 (23%), Positives = 239/569 (42%), Gaps = 42/569 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFY--VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N  + IAL  +    +Q +     P+ +    E++   +   P+   +       
Sbjct: 1   MDSQRN-ILLIALLFVSFLLYQQWNMDNSPQPQGQGTEQQVNNSGDVPSHSGDGQPI--- 56

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
               Q  +    + +    L  S++  G    +  L  Y+ ++ S    + L        
Sbjct: 57  --PDQETTSKDLITINTDVLALSVDTLGGDVIEAKLLAYNNELDSADSFILL--KDEPGL 112

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTISLD 175
           +Y A+   +             +        L          + +        +  +   
Sbjct: 113 SYIAQSGLIGANGIDSANGRAQLAVTAKDFTLADGQDELRVPMTYVKDGITYTKTFVLKR 172

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             Y   +  T+ N S          ++ ++      +         A   D +  ++   
Sbjct: 173 NSYAVDVEYTIDNQSASAASVQMYAQLRQNLMDDGGSLTMPTYRGGAYSTDTTNYKKYSF 232

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D  +    N   +N W  +   Y+ S +IP  E + +   +  +               T
Sbjct: 233 DDMQDKSLNMTTTNGWAAMLQHYFVSAWIPRSEEASNLYTRASNG---LGYIGVRLPTTT 289

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I  G   T T  L+ G K    +     +       + +D+GW +FIA P+  L+S+  +
Sbjct: 290 IAAGTEQTLTATLWVGPKLQKEMEATAAN-----LNLTVDYGWLWFIASPLHKLLSFIQS 344

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           +VGN+G+AIM+ T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + M
Sbjct: 345 IVGNWGLAIMMLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERLGD-DRQRMSQEM 403

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK   +NPL GC PI+LQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP     
Sbjct: 404 MELYKKEKVNPLGGCLPIVLQMPIFIALYWSLMESVELRHSPFFGWIHDLSAQDPYY--- 460

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534
                           I P++M +SMF+  KMSP    D  Q  I+ +MPV+F F    F
Sbjct: 461 ----------------ILPLLMGVSMFMIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLFF 504

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           P+GL++YW  SNV++++QQ +I +    +
Sbjct: 505 PSGLVLYWLVSNVVTLLQQTLIYRSLEKK 533


>gi|323516074|gb|ADX90455.1| putative inner membrane protein translocase component YidC
           [Acinetobacter baumannii TCDC-AB0715]
          Length = 574

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 137/588 (23%), Positives = 241/588 (40%), Gaps = 67/588 (11%)

Query: 11  IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
              + +++ AWQ  Y                 E++ +  N +T    + V  +  A    
Sbjct: 2   FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVASDVPQANIAQSQT 61

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A A      + ++       IN KG     + L  +     SN P V L + +     
Sbjct: 62  TDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPFVMLENDAK--RT 119

Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164
           Y A+   +             ++                  SG      T   +      
Sbjct: 120 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKVLTVPMVFKTPEG 179

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220
             + +        Y   +   V N S    +    G++ R   +     +   F +    
Sbjct: 180 VEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 239

Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271
               G       + K+++  +  ++       W+ +   Y+ S +IP       +    +
Sbjct: 240 GGAWGTPDAHYNKLKFANFSEEKLN-TEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQPY 298

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            ++ +            F++  I +  G S+     L++G K    +             
Sbjct: 299 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 353

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ 
Sbjct: 354 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 413

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           I P++  ++E+F         + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+
Sbjct: 414 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 472

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+RHAP+ GWI DL+A DP                     I P+IM  +MF Q  ++P P
Sbjct: 473 ELRHAPWLGWIHDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 513

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           AD  QA +   MP++F   +  FPAGL++YW  +N I+I+QQ  I K 
Sbjct: 514 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINKS 561


>gi|299772121|ref|YP_003734147.1| putative inner membrane protein translocase component YidC
           [Acinetobacter sp. DR1]
 gi|298702209|gb|ADI92774.1| putative inner membrane protein translocase component YidC
           [Acinetobacter sp. DR1]
          Length = 586

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 136/588 (23%), Positives = 237/588 (40%), Gaps = 67/588 (11%)

Query: 11  IALSVIIVYAWQNFYVYPRIEEMNNERK-----------NIQTVKQPNQVDNSYAAVLID 59
              + +++ AWQ  Y                        N +     + V  +  A    
Sbjct: 14  FVTAYLLILAWQKDYGNAATAPQKQAAAVSSHEVSADLPNAKNATVASDVPQANIAQSQT 73

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A A      + ++       IN KG     + L  +     S+ P V L +   TK  
Sbjct: 74  TDATAPVNQQLISVQTDLYHIWINPKGGDIVRIELLSHDKSKDSDQPFVMLEND--TKRT 131

Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164
           Y A+   +             ++                   G+         +      
Sbjct: 132 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQNQKGQSEKVLNVPMVFKTPEG 191

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220
             + +        Y   +   V N S    +    G++ R         +   F +    
Sbjct: 192 VEIIKTFTFTQGQYPIVVRHQVINRSQQSWQGQMFGQLKRDNSDDPGKSSQGIFTLGTFL 251

Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271
               G       + K+++  +  ++       W+ I   Y+ S +IP       +    +
Sbjct: 252 GGAWGTPDSHYNKLKFANFSEEKVN-TEAKGGWVAIVQHYFVSAWIPGNLKLTQANGQPY 310

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            ++ +            F++  I +  G S+     L++G K    +             
Sbjct: 311 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 365

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+GW + IAK +F+ + +F+++VGN+G +I+L TV VK++ +PL+ K Y S A M+ 
Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTVMVKMILWPLSSKSYRSMAKMRV 425

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           I P++  ++E+F         + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+
Sbjct: 426 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+RHAP+ GWI+DL+A DP                     I P+IM  +MF Q  ++P P
Sbjct: 485 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 525

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           AD  QA +   MP++F   +  FPAGL++YW  +N I+I+QQ+ I K 
Sbjct: 526 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINKS 573


>gi|71066698|ref|YP_265425.1| putative inner membrane protein translocase component YidC
           [Psychrobacter arcticus 273-4]
 gi|71039683|gb|AAZ19991.1| protein translocase subunit yidC [Psychrobacter arcticus 273-4]
          Length = 565

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 129/584 (22%), Positives = 242/584 (41%), Gaps = 56/584 (9%)

Query: 7   YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV--------- 56
             +A+ + + +++ AW++ Y      +   E         P+    +             
Sbjct: 9   IIIAMLITAYLLILAWRDDYADAPAVDTVPETATSVGADIPSTSGAAGDIPVQTLPVDNG 68

Query: 57  ---LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
                   A   + +  + +        IN +G       L+ Y   + S+ P V L   
Sbjct: 69  TVDNSAVTATPATDAGLITVTTDRYDIKINPEGGDIVYAALKQYDATLDSDKPFVLL--E 126

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANNILFE 169
           +N+   Y A+   +     I+       ++  +   +       L     +K     + +
Sbjct: 127 NNSNRVYVAQSGLIGQNG-IDTAEGRAKYSHTANNYVMEKGQQTLSVPLTYKKDGVTITK 185

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT------FGVQEGFIAV 223
                 + Y   I   + N S    +     ++ R   +    +           G    
Sbjct: 186 TFSFTHDKYPIDISYKIQNASTAAWQGQMFAQLKRDDSKDPGMSDKGALSMATYLGGAWG 245

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
             D    + K+ +     ++       W+GI   Y+ S + P     F  +F     G  
Sbjct: 246 TPDDPYNKLKFGNFNDGELTTT-SDKGWVGIVQHYFVSAWTPEN---FTGKFFSRETGDD 301

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            Y   F++  + + P K +T    L+AG K    +               +D+G  + I+
Sbjct: 302 -YFIGFNSQPVNVAPDKQVTLNATLYAGPKVQSELKDVAA-----GLNQTVDYGLLWPIS 355

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           K +F L+   + ++GN+G +I+L T+ VK      + K Y S A M+ I P++  L+E+ 
Sbjct: 356 KILFALLDGIHKIIGNWGWSIILLTILVKFALMWFSNKSYYSMAKMRAIAPRLAALKEEH 415

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                ++  + M+ +YK   +NP+AGC PIL+Q+P+F A+Y V+  S+E+RHAP+  WI+
Sbjct: 416 GDDRMKM-SQEMMAMYKEEKVNPMAGCLPILMQMPIFLALYWVLVESIELRHAPWVLWIQ 474

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DL+A DP                     I P++M +SMF+Q +++P PAD  QA ++ ++
Sbjct: 475 DLSAMDPWF-------------------ILPLLMGVSMFVQQQLNPQPADPMQAKVMKFL 515

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
           P++F   +  FPAGL++YW+ +N+ S+  Q ++ K    E  L 
Sbjct: 516 PIIFTAFMLFFPAGLVLYWTVNNLFSMTHQYIVNKKVEEEQKLR 559


>gi|90415380|ref|ZP_01223314.1| inner membrane protein, 60 kDa [marine gamma proteobacterium
           HTCC2207]
 gi|90332703|gb|EAS47873.1| inner membrane protein, 60 kDa [marine gamma proteobacterium
           HTCC2207]
          Length = 560

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 133/579 (22%), Positives = 248/579 (42%), Gaps = 50/579 (8%)

Query: 1   MERNWNY-FVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV-- 56
           M+   +    AI   + +++  W NF     +     ++++  T+ QP+Q+         
Sbjct: 1   MDWKKSLNIAAIGFVAWLLIIEWSNF--QDDVASQIPQQESELTIPQPSQLPTLETQQVN 58

Query: 57  -----------LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
                            +    +  V +   ++  +I+  G     + L  +   +S + 
Sbjct: 59  QFSDELPLLIDTPAAVVETRVDARLVTVTTDAVEVTIDTLGGDIVQVKLLKHLTKMSEDG 118

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKN 162
                L   ++KN Y A+   +                  S   L P        L    
Sbjct: 119 GEPFTLLTRSSKNEYIAQSGLIGKNGTDTREGRGAYSTSASQFSLEPNQSALNVDLTLNQ 178

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ---TATNTFGVQEG 219
               L +R       Y+  +   + N+  +    +  G+I R   +    ++       G
Sbjct: 179 NGVRLVKRFSFSRSGYVIGVSYLINNSGYEPWEATFYGQIKRDSHEPLVESSGGIQPYLG 238

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                 DK+  +  +SDI +           W+ +   Y+ S +IP  +   +   + LS
Sbjct: 239 AALREADKNFAKHDFSDI-QDETVKSSIEGGWVAMVQHYFVSAWIPPGDQKNNFSLRKLS 297

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
            G   Y   F+  +I +  G         + G K+   +    +       ++ +D+G+ 
Sbjct: 298 -GQDVYLMGFTGEKINVASGSYGEYMAQFYVGPKDQAKLEELAE-----YLDLTVDYGFL 351

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           + +AKP+F  M + + +VGN+G +I+L T+ +K+L +PL+     S A M+++QPK++ L
Sbjct: 352 WMLAKPIFAAMKFIHEVVGNWGWSIILLTIGIKILLYPLSAASLRSMAKMRSLQPKMERL 411

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +E       Q + + ++ LYK   +NP  GC+P+LLQ+PVF A+Y V+  S+E+RH+P+ 
Sbjct: 412 KE-TYGDDRQKMSQELMGLYKKEKVNPAGGCFPMLLQMPVFLALYWVLLESVEIRHSPWI 470

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            WI DL+A DP                     I P++M  SM +  K+ P P D  QAM+
Sbjct: 471 FWIDDLSAKDPYF-------------------ILPLVMGASMLLMQKLQPMPTDPTQAMV 511

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +  MP+ F F    FP+GL++YW+ +N++S+ QQ  + +
Sbjct: 512 MKIMPIAFTFFFMIFPSGLVLYWTVNNLLSMFQQWYVNR 550


>gi|160872739|ref|ZP_02062871.1| inner membrane protein OxaA [Rickettsiella grylli]
 gi|159121538|gb|EDP46876.1| inner membrane protein OxaA [Rickettsiella grylli]
          Length = 538

 Score =  328 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 135/567 (23%), Positives = 248/567 (43%), Gaps = 39/567 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME    + +  AL ++    W  +              N+ T +  N++       +   
Sbjct: 1   MELARVFLLG-ALFLVAFMLWNAWQNEYPSHHQEIGSANVITEQPDNKI---NLPAMKTI 56

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN-SPIVTLLSPSNTKNA 119
             +  + +  + +K   L   I+  G      NL  Y    +   S    LL+  N    
Sbjct: 57  PVENRNKNRFIHVKTDVLDVWIDTVGGNIVKANLLHYPQYPNQPRSTPFQLLNNDNAH-- 114

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           Y+   + + +    ++ +  +  N  +         + LV      I  ++  +   +  
Sbjct: 115 YYVAQNGLISTEKKQVFHYQSNKNNYTLNPEESVLKVSLVCNTCGKIKVQKQFTFKRNDY 174

Query: 180 -FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS--LVEQKYSD 236
              +   ++N +          +  + K   A + F +       +  ++    +  + D
Sbjct: 175 LIPVRYQISNVAPSIFEGRFYVQFQQRKIDKAHSLFNISSYTGGAISTQNKPYQKISF-D 233

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
             K    +    + W+ +   Y+ S +IP     FH       D    Y          I
Sbjct: 234 KMKQGTLSLATQDGWVAMLQHYFLSAWIPPAGQEFHFYSYAKDD---IYTLGMLGAPFQI 290

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
            PG    + + L+ G +    +         P  ++ +D+G  +FI+  +F L+ + ++ 
Sbjct: 291 QPGMEFVSESKLYLGPESMDRLKAVA-----PHLDLTVDYGILWFISMALFSLLKFIHHY 345

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           VGN+G +I++ TV +KL F+ L+ K Y S A+M+++QP++  LRE++     Q L +A +
Sbjct: 346 VGNWGWSIVIVTVLIKLAFYHLSAKSYRSMASMRSLQPRLQALRERYGDDK-QKLTQATM 404

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            LYKT  +NPL GC PIL+QIPVF A+Y ++  S+E+R APF  WI DL+A DP      
Sbjct: 405 ALYKTEKVNPLGGCLPILVQIPVFIALYWMLLESVELRQAPFILWIHDLSAKDPYY---- 460

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536
                          I P++M ++MF+Q +++PPP D  QA ++ ++P+ F     +FP+
Sbjct: 461 ---------------ILPVLMGITMFVQQRLNPPPPDPTQAKVMQFLPIFFTALFLNFPS 505

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW  +N +SI+QQ  IM+    E
Sbjct: 506 GLVLYWIVNNTLSILQQWFIMRRLSVE 532


>gi|283851181|ref|ZP_06368464.1| 60 kDa inner membrane insertion protein [Desulfovibrio sp. FW1012B]
 gi|283573350|gb|EFC21327.1| 60 kDa inner membrane insertion protein [Desulfovibrio sp. FW1012B]
          Length = 530

 Score =  328 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 149/571 (26%), Positives = 248/571 (43%), Gaps = 55/571 (9%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             N    +A+ LS+ ++  W   +  P   +        QT     Q     A       
Sbjct: 1   MENKRVILAVVLSLAVLVGWNFLF--PAKPQAPKTDTPTQTEAPTAQAPAPAAQRAETLP 58

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
           A A +   +V +  P      N  G   +  +L+GY   ++ +SP+V L++      A  
Sbjct: 59  AFAPTPGRKVTVNTPLYTAVFNSAGGVLEQFSLKGYRQTIAPDSPLVDLVNAKAQLKAPL 118

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPT---TPIKLVFKNANNILFERTISLDEHY 178
             +       N      N  W++  G +         +    +  + ++          Y
Sbjct: 119 GLIV------NGTPTWQNVEWSVEGGDLKLDAAGAGSLSFTGRLGDTLIRRTLTFSGASY 172

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
           L     +++N     ++      +   +   A +++   +      G     E   ++ +
Sbjct: 173 LIDEKLSLSNTGAAPVKDRLSLTVAVDRLSAADDSYNPTQAAFYDTGL----ELFSNEKK 228

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPS-KETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            +      +   W  +   Y+    IP  +     ++F         ++     + I I 
Sbjct: 229 LAEGMTDEKPVQWGAVMSNYFLVGIIPEAEGLRGKAKF-----EDEIFRVALDKDGIEIP 283

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G         + G K+   +     +LA       ID+GWF FIAKP+  L+ +FY+ V
Sbjct: 284 AGGRTDLDVRYYLGPKDPKFLAQAPHNLAA-----AIDYGWFDFIAKPLLKLLHFFYDYV 338

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
           GN+G+AI+L TV +K LF+PL+ K Y S   MK +QP + +LREK K    Q + + M+Q
Sbjct: 339 GNYGVAIILLTVLIKGLFWPLSHKSYKSMEQMKRLQPLLTQLREKHKD-DRQKMNEEMMQ 397

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIKDLAAAD 469
           LYKT+ +NP  GC P+++QIPVFF +Y+ +  S+E+RHAPF          W+ DL+A D
Sbjct: 398 LYKTYKVNPAGGCLPMIVQIPVFFGLYQALLHSIELRHAPFIAHLPFTNMIWLADLSAKD 457

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529
           P                     I P++M  +MF+Q KM+P P D  QA ++  MPV+F F
Sbjct: 458 PYY-------------------ITPLVMGATMFLQQKMTPAPGDPTQAKVMLLMPVIFTF 498

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI-MKM 559
              +FP+GL++YW  +NVISI QQ  +  K 
Sbjct: 499 MFLNFPSGLVVYWLVNNVISIAQQYWMLNKK 529


>gi|207727482|ref|YP_002255876.1| preprotein translocase subunit yidc [Ralstonia solanacearum MolK2]
 gi|206590719|emb|CAQ56331.1| preprotein translocase subunit yidc [Ralstonia solanacearum MolK2]
          Length = 563

 Score =  328 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 153/578 (26%), Positives = 249/578 (43%), Gaps = 41/578 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVD 50
           M+      + +  S+ +V     WQ        F+  P+                  +  
Sbjct: 1   MDI-KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGGTPAGDVPKSA 59

Query: 51  NSYAAVLIDDR-----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
            + AA           A     S ++ +    +  +++  GA    L L         + 
Sbjct: 60  ATPAAAGSQAAPATGGASQTPASEKIVVTTDVIRATVDTAGAILTKLELLTQK---DHDG 116

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             V L    + +  Y A    +   +                        + L       
Sbjct: 117 NPVVLF-DRSLERTYLARSGLIG-GDFPNHTTVFAASAGPRNLGTGGEVSLTLTADKGGA 174

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVL 224
            L +  +     Y+      VTN+    I  +    + R       +  +    G     
Sbjct: 175 KLAKTYVFKRGSYVIDTRFDVTNDGAAPISPTLYMELARDGGSVEQSRFYSTFTGPAVYT 234

Query: 225 GDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
                 +  +SDI+K          N W+G+   Y+AS +IP+       +F        
Sbjct: 235 DADKFHKINFSDIDKGKAHVPAATDNGWVGMVQHYFASAWIPAASA--KREFYVDRVDTN 292

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            Y+        T+ PG S++ T  LFAG +E   +         P  +++ D+GW   IA
Sbjct: 293 FYRIGIQEPLGTVAPGASLSATARLFAGPQEESMLEAIT-----PGLDLVKDYGWLTVIA 347

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP+F L+   + L+GN+G +I+  TV VKL+FFPL+   Y S A MK++QP++  +RE+ 
Sbjct: 348 KPLFWLLERIHALLGNWGWSIVALTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERH 407

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
           K   PQ + + M+ LY+T  +NPL GC PIL+QIPVF ++Y  +  S+EMR AP+ GW+ 
Sbjct: 408 KG-DPQKMNQEMMTLYRTEKVNPLGGCLPILIQIPVFMSLYWALLSSVEMRGAPWVGWVH 466

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DLAA D   +F  +  +P        VG+ PI+M++SMF+Q K++P P D  QA ++ +M
Sbjct: 467 DLAAPD--ALFGTYFGVP--------VGLLPILMAVSMFVQTKLNPTPPDPVQAKMMMFM 516

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           P+ F      FP+GL++YW  +N +SI QQ  I +M G
Sbjct: 517 PLAFSVMFFFFPSGLVLYWVVNNCLSIAQQWSINRMLG 554


>gi|94312544|ref|YP_585754.1| putative inner membrane protein translocase component YidC
           [Cupriavidus metallidurans CH34]
 gi|166977403|sp|Q1LH91|OXAA_RALME RecName: Full=Inner membrane protein oxaA
 gi|93356396|gb|ABF10485.1| inner membrane insertion protein YidC/OxaA [Cupriavidus
           metallidurans CH34]
          Length = 555

 Score =  328 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 146/578 (25%), Positives = 239/578 (41%), Gaps = 48/578 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAW----------QNFYVYPRIEEMNNER----KNIQTVKQP 46
           M+      + +  S+ +V  +            F+     ++              V + 
Sbjct: 1   MDI-KRTILWVIFSMSLVLLYDNWQRANGHASMFFPSANTQQAAPAGAGGATPQADVPKA 59

Query: 47  NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
           N  + +   V    +A A  +  +V +    +   I+  G     L L   H     +  
Sbjct: 60  NATNAAPGTVPAAPQAAAQPVGEKVTVTTDEVRAEIDTAGGILSRLELLNEHE---KDGA 116

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
            V LL   +    Y A    +                  +         + L  +     
Sbjct: 117 PVVLL-ERDVNRTYLARSGLIGGDLPNHTTVFTVAPGARTLAPGQDKLDVVLTAEKNGVK 175

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQEGFIAVLG 225
             +        Y+      VTN     +  +    + R   +   + F     G      
Sbjct: 176 FVKTYTFHKGSYVVDTRFDVTNTGTAAVSPTLYLELARDGSKVEKSQFYSTFTGPAIYTN 235

Query: 226 DKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
                +  + DI K   +      N W+ +   Y+AS +IP         F         
Sbjct: 236 ADKYHKLTFEDIAKGKATVPAATDNGWVAMVQHYFASAWIPQTGKQH--SFYAEQIDPNL 293

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y+         + PG +++T   LFAG +E   +         P  E++ D+GW   +AK
Sbjct: 294 YRVGIQQPLGQLAPGATVSTDARLFAGPQEERMLEQIT-----PGLELVKDYGWLTILAK 348

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L+   +  +GN+G +I+  TV +KL+FFPL+   Y S   MK++QP++  +RE+ K
Sbjct: 349 PLFWLLEKLHGFLGNWGWSIIGLTVLIKLVFFPLSAASYKSMGKMKDLQPRMTAIRERHK 408

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
              PQ + + M+ LY+T  +NPL GC PI++QIPVF A+Y V+  S+EMR AP+ GWI D
Sbjct: 409 G-DPQKMNQEMMALYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIHD 467

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+  DP                     I PI+M++SMF+Q +++P P D  QA ++  MP
Sbjct: 468 LSVPDPFY-------------------ILPIVMAVSMFVQTRLNPTPPDPVQAKVMMIMP 508

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           +VF F    FPAGL++YW  +N++SI QQ  I +M G 
Sbjct: 509 LVFSFMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGK 546


>gi|170697750|ref|ZP_02888837.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria
           IOP40-10]
 gi|170137365|gb|EDT05606.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria
           IOP40-10]
          Length = 553

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 146/576 (25%), Positives = 238/576 (41%), Gaps = 45/576 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVD- 50
           M+        I     ++    WQ        F+                T       + 
Sbjct: 1   MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAVAGGASGTGATTTAGEV 60

Query: 51  NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
            + AA          + +  V+       G I+ +G     L L+          P + +
Sbjct: 61  PAAAAGTAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLYI 117

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNIL 167
               +T    +     +   +     +  T  N     +      +KL F+        +
Sbjct: 118 TLFDHTAGHTYLARTGLLGGDFPNHNDVYTQVNAGPTSLTGDQNALKLSFESPVKGGVKV 177

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGD 226
            +        Y+  +   + N     +  +    ++R      T  F     G       
Sbjct: 178 VKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDA 237

Query: 227 KSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           K   +  +SD++K+  +      N W+ +   Y+AS +IP +               A Y
Sbjct: 238 KHFQKIDFSDLDKNKANFEKTADNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPALY 295

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
           +         I PG+S      LFAG +E   +         P  E++ D+GW   IAKP
Sbjct: 296 RVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKP 350

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+   +  VGN+G AI+L TV +K +FFPL+   Y S A MK I P++  LRE+F +
Sbjct: 351 LFWLLEKIHGFVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-K 409

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
           S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL
Sbjct: 410 SDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDL 469

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525
           +  DP                     I P++M++SMF+Q  ++P P D  QA ++ +MP+
Sbjct: 470 SQRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPI 510

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 511 AFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 546


>gi|322506198|gb|ADX01652.1| YidC [Acinetobacter baumannii 1656-2]
          Length = 574

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 137/588 (23%), Positives = 242/588 (41%), Gaps = 67/588 (11%)

Query: 11  IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
              + +++ AWQ  Y                 E++ +  N +T    + V  +  A    
Sbjct: 2   FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVASDVPQANIAQSQT 61

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A A      + ++       IN KG     + L  +     SN P V L + +     
Sbjct: 62  TDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPFVMLENDAK--RT 119

Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164
           Y A+   +             ++                  SG      T   +      
Sbjct: 120 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKVLTVPMVFKTPEG 179

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220
             + +        Y   +   V N S    +    G++ R   +     +   F +    
Sbjct: 180 VEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 239

Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271
               G       + K+++  +  ++       W+ +   Y+ S +IP       +    +
Sbjct: 240 GGAWGTPDAHYNKLKFANFSEEKLN-TEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQPY 298

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            ++ +            F++  I +  G S+     L++G K    +             
Sbjct: 299 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 353

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ 
Sbjct: 354 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 413

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           I P++  ++E+F         + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+
Sbjct: 414 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 472

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+RHAP+ GWI+DL+A DP                     I P+IM  +MF Q  ++P P
Sbjct: 473 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 513

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           AD  QA +   MP++F   +  FPAGL++YW  +N I+I+QQ  I K 
Sbjct: 514 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINKS 561


>gi|33575018|emb|CAE39684.1| probable inner-membrane protein [Bordetella parapertussis]
          Length = 554

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 150/571 (26%), Positives = 247/571 (43%), Gaps = 52/571 (9%)

Query: 11  IALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
           +  S  ++  W N+         +  P  E    ++              S  +      
Sbjct: 1   MIFSFSLLLLWNNWQIHNGKPSLFGGPAPEAAATQQPKADANGTAASSTASIPSSPAAAP 60

Query: 62  AQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
           A A              +V +    L  + +  GAQ     L  Y     S+ P V +  
Sbjct: 61  AAASVPGAAAPAAAKSEQVVITTDVLRLTFDSNGAQLIRAELLKYPSSSQSDKPTVLM-- 118

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVFKNANNILFER 170
             +    Y A+   V        P   T ++L+S +      T  +    ++    + + 
Sbjct: 119 DRSADLVYVAQTGVVGAPQGESFPTHQTPFHLVSSERSLTGDTLDVVFEAESGGLKVTKT 178

Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKS 228
                  Y   +   + N     +  +   ++ R    P   ++ +    G         
Sbjct: 179 YTLHRGRYDVDVRHAMANTGGAPLSPALYLQLERDGTDPAGTSSFYHTFTGVAVYSEQDK 238

Query: 229 LVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
             +  +SDIEK   +   +  N W+GI   Y+A+ +IP++     ++   L      Y A
Sbjct: 239 FQKVTFSDIEKKKGTYIKQADNGWIGIVQHYFATAWIPAQGKQRTNEL--LQVQQNLYAA 296

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
           +      TI PG S      L+ G ++   +         P  E+++D+GW   IAKP+F
Sbjct: 297 RTIEAVGTIAPGSSANVDAHLWVGPQDQKAMAAVA-----PGLELVVDYGWLTIIAKPLF 351

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            LM++ + L+GN+G  I+  TV +K +FFPLA   Y S A MK + P++  L+EK+    
Sbjct: 352 TLMTWLHGLLGNWGWTIVALTVIIKAVFFPLAAASYRSMARMKQVAPRLQALKEKYGD-D 410

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q L +AM+++Y+T  INPL GC P+++QIPVF A+Y V+  S+EMR AP+  W+ DL+ 
Sbjct: 411 RQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAPWILWVHDLSV 470

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527
            DP                     I P IM  +MF+Q+K++P P D  QA ++  MP+VF
Sbjct: 471 RDPFF-------------------ILPAIMMATMFLQIKLNPTPPDPVQAKVMMIMPLVF 511

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              +  FPAGL++YW  +N +SI QQ  I +
Sbjct: 512 GGMMFFFPAGLVLYWCVNNTLSIAQQWTITR 542


>gi|187925954|ref|YP_001897596.1| inner membrane protein translocase component YidC [Burkholderia
           phytofirmans PsJN]
 gi|254772762|sp|B2T7U1|OXAA_BURPP RecName: Full=Inner membrane protein oxaA
 gi|187717148|gb|ACD18372.1| 60 kDa inner membrane insertion protein [Burkholderia phytofirmans
           PsJN]
          Length = 552

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 146/574 (25%), Positives = 234/574 (40%), Gaps = 42/574 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M+        I     ++    WQ        F+      +         T       D 
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTVGSAAPGTTTPGTQPADL 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
                     A A + S  V+       G I+ +G     L+L            +V  L
Sbjct: 61  PATNAAAPGNAPAATQSQLVKFNTDVYSGEIDTRGGTLSKLSLVN--KGDGKQPDLVITL 118

Query: 112 SPSNTKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
                 + Y A    +     N+ ++                               + +
Sbjct: 119 FDRTANHTYLARTGLLGGDFPNHNDIYTPLPNQQHDLTGDEKSFQLSFESPVKGGVKVIK 178

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKS 228
                   Y+  +   + N     +  S    ++R      T  F     G         
Sbjct: 179 TYTFTRGSYVIGVDTKIQNVGTAPVTPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQHH 238

Query: 229 LVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
             +  + DI+K+         N W+ +   Y+AS +IP +               A Y+ 
Sbjct: 239 FQKMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQG--VKRDIYVEKIDPALYRV 296

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
                  TI PG+++  +  LFAG +E   +         P  E++ D+GW   IAKP+F
Sbjct: 297 GVKEPVPTIAPGQTVDVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLF 351

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+   ++ VGN+G +I+L T+ +K +FFPL+   Y S A MK I P++  LRE+FK   
Sbjct: 352 WLLEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG-D 410

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
           PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+ 
Sbjct: 411 PQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQ 470

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527
            DP                     I P++M++SMF+Q K++P P D  QA ++ +MP+ F
Sbjct: 471 QDPFF-------------------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAF 511

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
                 FPAGL++Y+  +NV+SI QQ  I +M G
Sbjct: 512 SVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545


>gi|33568943|emb|CAE35357.1| probable inner-membrane protein [Bordetella bronchiseptica RB50]
          Length = 554

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 150/571 (26%), Positives = 247/571 (43%), Gaps = 52/571 (9%)

Query: 11  IALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
           +  S  ++  W N+         +  P  E    ++              S  +      
Sbjct: 1   MIFSFSLLLLWNNWQIHNGKPSLFGGPAPEAAATQQPKADANGTAASSTASIPSSPAAAP 60

Query: 62  AQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
           A A              +V +    L  + +  GAQ     L  Y     S+ P V +  
Sbjct: 61  AAASVPGAAAPAAAKSEQVVITTDVLRLTFDSNGAQLIRAELLKYPSSSQSDKPTVLM-- 118

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVFKNANNILFER 170
             +    Y A+   V        P   T ++L+S +      T  +    ++    + + 
Sbjct: 119 DRSADLVYVAQTGVVGAPQGESFPTHQTPFHLVSSERSLTGDTLDVVFEAESGGLKVTKT 178

Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKS 228
                  Y   +   + N     +  +   ++ R    P   ++ +    G         
Sbjct: 179 YTLHRGRYDVDVRHAMANTGGAPLNPALYLQLERDGTDPAGTSSFYHTFTGVAVYSEQDK 238

Query: 229 LVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
             +  +SDIEK   +   +  N W+GI   Y+A+ +IP++     ++   L      Y A
Sbjct: 239 FQKVTFSDIEKKKGTYIKQADNGWIGIVQHYFATAWIPAQGKQRTNEL--LQVQQNLYAA 296

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
           +      TI PG S      L+ G ++   +         P  E+++D+GW   IAKP+F
Sbjct: 297 RTIEAVGTIAPGSSANVDAHLWVGPQDQKAMAAVA-----PGLELVVDYGWLTIIAKPLF 351

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            LM++ + L+GN+G  I+  TV +K +FFPLA   Y S A MK + P++  L+EK+    
Sbjct: 352 TLMTWLHGLLGNWGWTIVALTVIIKAVFFPLAAASYRSMARMKQVAPRLQALKEKYGD-D 410

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q L +AM+++Y+T  INPL GC P+++QIPVF A+Y V+  S+EMR AP+  W+ DL+ 
Sbjct: 411 RQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAPWILWVHDLSV 470

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527
            DP                     I P IM  +MF+Q+K++P P D  QA ++  MP+VF
Sbjct: 471 RDPFF-------------------ILPAIMMATMFLQIKLNPTPPDPVQAKVMMIMPLVF 511

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              +  FPAGL++YW  +N +SI QQ  I +
Sbjct: 512 GGMMFFFPAGLVLYWCVNNTLSIAQQWTITR 542


>gi|323527919|ref|YP_004230072.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Burkholderia sp. CCGE1001]
 gi|323384921|gb|ADX57012.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Burkholderia sp. CCGE1001]
          Length = 552

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 147/575 (25%), Positives = 239/575 (41%), Gaps = 44/575 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M+        I     ++    WQ        F+      +         T       D 
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTAGSAAPGTTTPGTQPADL 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
                       A + S  V+       G I+ +G     L+L         +  +V  L
Sbjct: 61  PATNAAAPANTPAAAQSQLVKFSTDVYSGEIDTRGGTLSKLSLVKQGDGKQPD--LVITL 118

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILF 168
                 + Y A    +   +     +  T+      ++        L F+        + 
Sbjct: 119 FDRTGNHTYLARTGLLG-GDFPNHNDVYTLMPNQQTELKGDQKSFSLSFESPVKGGVKVI 177

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDK 227
           +        Y+  +   + N     +  S    ++R      T  F     G        
Sbjct: 178 KTYTFTRGSYVIGVDTKIQNVGTAPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQH 237

Query: 228 SLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
              +  + DI+K+      +  N W+ +   Y+AS +IP +               A Y+
Sbjct: 238 HFQKMTFGDIDKNKEDYAKQADNGWIAMVQHYFASAWIPQQG--VKRDIYVEKIDPALYR 295

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
                    I PG+++  +  LFAG +E   +         P  E++ D+GW   IAKP+
Sbjct: 296 VGVKEPVAAIAPGQTVDVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPL 350

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+   ++ VGN+G AI+L T+ +K +FFPL+   Y S A MK I P++  LRE+FK  
Sbjct: 351 FWLLEKIHSYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG- 409

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+
Sbjct: 410 DPQKMNAALMELYKTEKVNPFGGCLPVVVQIPVFISLYWVLLSSVEMRGAPWILWIHDLS 469

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
             DP                     I P++M++SMF+Q K++P P D  QA ++ +MP+ 
Sbjct: 470 QQDPYF-------------------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIA 510

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           F      FPAGL++Y+  +NV+SI QQ  I +M G
Sbjct: 511 FSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545


>gi|126668973|ref|ZP_01739912.1| putative inner membrane protein translocase component YidC
           [Marinobacter sp. ELB17]
 gi|126626557|gb|EAZ97215.1| putative inner membrane protein translocase component YidC
           [Marinobacter sp. ELB17]
          Length = 593

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 141/591 (23%), Positives = 244/591 (41%), Gaps = 60/591 (10%)

Query: 1   MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV--DNSYAAV 56
           M+       A    +S ++V AW   Y  P      +E  +       + +    +  A 
Sbjct: 26  MDIKRIVLFAGLAVVSYLMVLAWNEDYHQPVPVAQTSEPVDFSAAGNNDTMTLPEAGDAN 85

Query: 57  LIDDRAQALSMSPR---------------VELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
                  A   S                 V +       +I+         +L  Y  ++
Sbjct: 86  TDSTGEFATPESETSLSNTNNVNNVSNQYVHVITDVFDITIDQVSGNLVSSSLLQYDREL 145

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV-WNLISGKILTPTTPIKL-- 158
           + + P+  L +  N    Y  E   +         N +   ++             +L  
Sbjct: 146 NGDEPLKLLSNTQN--RLYVLESGLIGRDGPDNSRNGDAPVYSSTQNSYQMAEGENQLAV 203

Query: 159 ---VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
                 N+   + +R     + Y   I   + N S ++ + +  G+I+R +    T+   
Sbjct: 204 DLNYTTNSGVNIIKRFTFNRDDYQIDIRYLIDNRSENEWQANFTGKIVRDQAGDQTSQNS 263

Query: 216 V----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
           +      G +    +    +  + D++   I+    +N W+     Y+ + ++P  +   
Sbjct: 264 MGIKAFLGLVVSTPEDPYEKYDFDDLKDKPINQ-SVTNGWMAFLQHYFLTAWVPEPDQQA 322

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
             Q              F      +  G+++      + G K    +         P  +
Sbjct: 323 QFQTTRR---GPLAVMGFVYPATNVPVGETVEVGASAYVGPKIIDRLETVA-----PNLD 374

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+GW +FI+ P+F+++++F+ ++GN+G++I+L TV VK LFF L+   Y S A M+ 
Sbjct: 375 RTVDFGWLFFISLPLFVVLNWFHGIIGNWGVSIILLTVLVKGLFFHLSATSYRSMARMRA 434

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           + PK+  ++E +     Q +   M+ LYK   INPL GC PIL+Q+PVF ++Y V+  S+
Sbjct: 435 VAPKLARMKELYGD-DRQRMSTEMMALYKREKINPLGGCLPILVQMPVFISLYWVLFESV 493

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           ++RHAPF  WI DL+  DP                     I PIIM  SM +QM ++P P
Sbjct: 494 QLRHAPFALWIHDLSVMDPYF-------------------ILPIIMGASMMLQMHLNPTP 534

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            D  QA I+  MPVVF      FPAGL++YW  +NV+SI QQ  I +   A
Sbjct: 535 PDPMQAKIMKLMPVVFTIFFLWFPAGLVLYWVVNNVLSISQQWYITRKIEA 585


>gi|296137608|ref|YP_003644850.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Thiomonas intermedia K12]
 gi|295797730|gb|ADG32520.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Thiomonas intermedia K12]
          Length = 565

 Score =  327 bits (837), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 134/583 (22%), Positives = 227/583 (38%), Gaps = 51/583 (8%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDNS 52
                  + +  ++ +++ + ++         +  P              V Q      +
Sbjct: 1   MDLRRSVLWVVFTMSMIFLYNSWLRYNGETDLFGTPPAHPAQVASAPTSAVPQAAPTTAT 60

Query: 53  YAAVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
              +        LS                ++   +   I+ +G       L  Y     
Sbjct: 61  PPNIAGAAATAPLSAPVAAASAAPAAQLTTIRTDLMDVKISSRGGNLVYAKLLKYESRTE 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
               +V  L      N Y A+   +             +                +    
Sbjct: 121 PGKNVV--LFDDTPSNKYMAQSGLIGGDFPNHETEMTVLPGPRDMGNAKTLQVKLVSPDL 178

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ---TATNTFGVQEG 219
               L        + Y+  + +T+TN     +      +++R         ++ +    G
Sbjct: 179 GGIKLERTYTFTRDSYVVNVQNTITNTGSVAVAPQMYMQLVRDGNTPAGDESHFYHTYTG 238

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                      + ++ D++ +  +     + W+ +   Y+ S ++P              
Sbjct: 239 PAYYDNANKFQKFEFKDLKTNE-APKKADSGWVAMIQHYFVSAWVPE-PYEGSRDLYTRK 296

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
            G   Y          I PGKSITT   LF G +   T+         P  E++ D+GW 
Sbjct: 297 LGDNLYAVGVIQPLPQIAPGKSITTDAKLFVGPELESTLGALA-----PGLELVKDYGWV 351

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             +AKP+F L+   + +V N+G +I++ T+ +KL FFPL    Y S A MK + P+I+ L
Sbjct: 352 TILAKPIFWLLEMIHKVVQNWGWSIIVLTLLIKLAFFPLTAASYKSMARMKAVGPRINAL 411

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           RE +K    ++  +AM++LY+   INPL GC PI++QIPVF A+Y V+  S+E+R AP+ 
Sbjct: 412 RESYKGDQAKM-NQAMVELYRKEKINPLGGCLPIVIQIPVFIALYWVLLSSVELRGAPWI 470

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            WI DL+A DP                     I P IM+ + F+Q+K++P P D  QA +
Sbjct: 471 LWIHDLSAKDPYY-------------------ILPAIMTATSFLQVKLNPTPPDPMQARL 511

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           +  MP  F      FPAGL++YW  +N  SI QQ  I K  G 
Sbjct: 512 MWIMPAAFSIMFFFFPAGLVLYWLTNNTTSIAQQWFINKKMGV 554


>gi|83747144|ref|ZP_00944187.1| 60 kDa inner membrane protein YIDC [Ralstonia solanacearum UW551]
 gi|207741912|ref|YP_002258304.1| preprotein translocase subunit yidc [Ralstonia solanacearum
           IPO1609]
 gi|83726119|gb|EAP73254.1| 60 kDa inner membrane protein YIDC [Ralstonia solanacearum UW551]
 gi|206593298|emb|CAQ60225.1| preprotein translocase subunit yidc [Ralstonia solanacearum
           IPO1609]
          Length = 563

 Score =  327 bits (837), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 154/578 (26%), Positives = 250/578 (43%), Gaps = 41/578 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA---WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVD 50
           M+      + +  S+ +V     WQ        F+  P+                  +  
Sbjct: 1   MDI-KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGGTPAGDVPKSA 59

Query: 51  NSYAAVLIDDR-----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
            + AA           A     S ++ +    +  +++  GA    L L         + 
Sbjct: 60  ATPAAAGSQAAPATGGASQTPASEKIVVTTDVIRATVDTAGAILTKLELLTQK---DHDG 116

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             V L    + +  Y A    +   +        T               + L       
Sbjct: 117 NPVVLF-DRSLERTYLARSGLIG-GDFPNHTTVFTASAGPRDLGTGGEVSLTLTADKGGA 174

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVL 224
            L +  +     Y+      VTN+    I  +    + R       +  +    G     
Sbjct: 175 KLAKTYVFKRGSYVIDTRFDVTNDGAAPISPTLYMELARDGGAVEQSRFYSTFTGPAVYT 234

Query: 225 GDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
                 +  +SDI+K          N W+G+   Y+AS +IP+       +F        
Sbjct: 235 DADKFHKINFSDIDKGKAHVPAATDNGWVGMVQHYFASAWIPAASA--KREFYVDRVDTN 292

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            Y+        T+ PG S++ T  LFAG +E   +         P  +++ D+GW   IA
Sbjct: 293 FYRIGIQEPLGTVAPGASLSATARLFAGPQEESMLEAIT-----PGLDLVKDYGWLTVIA 347

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP+F L+   + L+GN+G +I+  TV VKL+FFPL+   Y S A MK++QP++  +RE+ 
Sbjct: 348 KPLFWLLERIHALLGNWGWSIVALTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERH 407

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
           K   PQ + + M+ LY+T  +NPL GC PIL+QIPVF ++Y  +  S+EMR AP+ GW+ 
Sbjct: 408 KG-DPQKMNQEMMTLYRTEKVNPLGGCLPILIQIPVFMSLYWALLSSVEMRGAPWVGWVH 466

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DLAA D   +F  +  +P        VG+ PI+M++SMF+Q K++P P D  QA ++ +M
Sbjct: 467 DLAAPD--ALFGTYFGVP--------VGLLPILMAVSMFVQTKLNPTPPDPVQAKMMMFM 516

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           P+ F      FP+GL++YW  +N +SI QQ  I +M G
Sbjct: 517 PLAFSVMFFFFPSGLVLYWVVNNCLSIAQQWSINRMLG 554


>gi|91785811|ref|YP_561017.1| putative inner membrane protein translocase component YidC
           [Burkholderia xenovorans LB400]
 gi|123167872|sp|Q13SH4|OXAA_BURXL RecName: Full=Inner membrane protein oxaA
 gi|91689765|gb|ABE32965.1| protein translocase subunit yidC [Burkholderia xenovorans LB400]
          Length = 552

 Score =  327 bits (837), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 145/574 (25%), Positives = 234/574 (40%), Gaps = 42/574 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M+        I     ++    WQ        F+                T       D 
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTRTVGSAAPGTTTPGTQPADL 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
                     A A + S  ++       G I+ +G     L+L         +  +V  L
Sbjct: 61  PATNAAAPGNAPAATQSQLIKFNTDVYSGEIDTRGGTLSKLSLVKQGDGKQPD--LVITL 118

Query: 112 SPSNTKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
                 + Y A    +     N+ ++                               + +
Sbjct: 119 FDRTANHTYLARTGLLGGDFPNHNDIYTPLPNQPHDLTGDEKSFQISFESPVKGGVKVIK 178

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKS 228
                   Y+  +   + N     +  S    ++R      T  F     G         
Sbjct: 179 TYTFTRGSYVIGVDTKIQNVGTTPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQHH 238

Query: 229 LVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
             +  + DI+K+         N W+ +   Y+AS +IP +               A Y+ 
Sbjct: 239 FQKMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQGA--KRDIYVEKIDPALYRV 296

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
                  TI PG+++  +  LFAG +E   +         P  E++ D+GW   IAKP+F
Sbjct: 297 GVKEPVPTIAPGQTVDVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLF 351

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+   ++ VGN+G +I+L T+ +K +FFPL+   Y S A MK I P++  LRE+FK   
Sbjct: 352 WLLEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG-D 410

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
           PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+ 
Sbjct: 411 PQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQ 470

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527
            DP                     I P++M++SMF+Q K++P P D  QA ++ +MP+ F
Sbjct: 471 QDPFF-------------------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAF 511

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
                 FPAGL++Y+  +NV+SI QQ  I +M G
Sbjct: 512 SVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545


>gi|83649689|ref|YP_438124.1| putative inner membrane protein translocase component YidC [Hahella
           chejuensis KCTC 2396]
 gi|123529916|sp|Q2S6M5|OXAA_HAHCH RecName: Full=Inner membrane protein oxaA
 gi|83637732|gb|ABC33699.1| Preprotein translocase subunit YidC [Hahella chejuensis KCTC 2396]
          Length = 570

 Score =  327 bits (837), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 139/565 (24%), Positives = 246/565 (43%), Gaps = 56/565 (9%)

Query: 21  WQNFYVYPRIEEMNNERKNIQTVKQPNQ---------------VDNSYAAVLIDDRAQAL 65
           W       +          I +    +                  +  A     + +   
Sbjct: 23  WNEDMSPQQQPVAQTPSVTIDSNGADSSALLNSPNTGELDTPETASKPATAEDSNISSTA 82

Query: 66  SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD 125
           S    + +    L   I+L G    + +L  Y + + + +P+  +    N    Y A   
Sbjct: 83  SSGKIITVITDVLRVEIDLNGGNVVEASLLQYPISLKNPTPLDLM--QKNNGVYYVAASS 140

Query: 126 YVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLDEHYLF 180
            +      +  N      +      +         + L  +     + +R       Y  
Sbjct: 141 LIGANGFDDSKNGGNPIYIAEKNSYSLQEGQDKLSVDLRTERDGVTIVKRYEFEKSSYSI 200

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGFIAVLGDKSLVEQKYSD 236
            +   + N S    + +   +++R K    T + G       G +    +K   +  +SD
Sbjct: 201 NVNFQINNQSDAPWKANFSAKLVRDKSPDPTFSGGFGAASFLGAVVSTPEKPYEKIDFSD 260

Query: 237 IEKSSIS--NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           +E+S  S    + SN W+     Y+ S +IP    +   Q +  +     Y   F   E 
Sbjct: 261 MEESGPSGVKVNSSNGWIAFIQHYFVSAWIPLSNDTHTYQTRLRNG---LYLMGFVDPEF 317

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           T+ PG++      L+AG K   T+         P  ++ +D+GW + IAKP+++++ + +
Sbjct: 318 TVEPGQTHNVGAKLYAGPKIMETLKEVA-----PNLDLTVDFGWLWLIAKPLYLVLEFIH 372

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+GIAI+L TV +K LFF L+   Y S ANM+ + P++  +RE++     Q + +A
Sbjct: 373 DYVGNWGIAIILLTVLIKALFFHLSATSYRSMANMRRVTPEMQRIREQYGD-DRQRMSQA 431

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   INPL GC P+L+Q+PVF ++Y V+  S+++R APF+ WI+DL+  DP    
Sbjct: 432 MMELYKKEKINPLGGCLPMLVQMPVFISLYWVLLESVQLRQAPFFFWIQDLSIKDPYF-- 489

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534
                            + P++M  +MF+Q  ++P P D  QA ++  MP++F      F
Sbjct: 490 -----------------VLPLLMGAAMFLQTSLNPTPPDPIQARVMKMMPIIFTVFFLWF 532

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKM 559
           PAGL++YW  +N++SI QQ  I K 
Sbjct: 533 PAGLVLYWLVNNILSIAQQWYITKK 557


>gi|39998555|ref|NP_954506.1| hypothetical protein GSU3466 [Geobacter sulfurreducens PCA]
 gi|81700814|sp|Q746Q2|OXAA_GEOSL RecName: Full=Inner membrane protein oxaA
 gi|39985502|gb|AAR36856.1| membrane protein, putative [Geobacter sulfurreducens PCA]
 gi|298507497|gb|ADI86220.1| preprotein translocase subunit YidC [Geobacter sulfurreducens
           KN400]
          Length = 531

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 152/559 (27%), Positives = 252/559 (45%), Gaps = 35/559 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME      +A+ LS++  Y +   +  P  E         Q+     QV  +   V +  
Sbjct: 1   ME--KRALIAVVLSILFFYGYTALFSPPPKETPKPVATATQSQPA-QQVTAAPVPVAVPA 57

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           + Q    +  V +  P+   + + +G     L+L+ YH         VTL+S  N  N  
Sbjct: 58  QPQPAVAARDVSVDTPAYSVTFSTQGGSIKRLDLKRYHETAGPGGKNVTLVSEDNPSN-- 115

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
              +   +    ++                     +   + +   +   +T +       
Sbjct: 116 -YTIGLRAPGFGLDQNAVFVPSADALTVGPGEKKQLSFTWVSPAGVTVTKTYNFSGDGYG 174

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
             +     NS      SP   +  +           +    A      L E K  D+   
Sbjct: 175 LEIQYQVTNSGSARVSSPVQTVQTYPLVPKVKESRFETFGPATFAQDKLFEDKVKDL--E 232

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
           S +  H +  W G +DKY+ S  +  + +   +  +  + G+       S+ E+++ PG+
Sbjct: 233 SGAKTHAAPLWSGFADKYFLSAVLAHEGSMAAATIRKTASGYLENTI--SSPELSLNPGE 290

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
               T  LF G K+   +            E  I+ GWF  +AKP+   + +F+N  GN+
Sbjct: 291 GRALTYRLFFGPKDIDVLKAQGNS-----LERAINLGWFAMLAKPLLHSLKFFHNYTGNY 345

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           GIAI++ TV +K++F+PL    Y S   M+ +QPK+ +LREK+K    + + +AM++LY+
Sbjct: 346 GIAIIIITVIIKVIFYPLTHSSYKSMKEMQKLQPKMQQLREKYKN-DREAMNRAMMELYQ 404

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
           TH +NP+ GC P+L+QIPVFFA+YK +  S+E+RHAPF  WI DLAA DP          
Sbjct: 405 THKVNPVGGCLPMLVQIPVFFALYKALMFSIELRHAPFMLWITDLAAKDPYY-------- 456

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
                      + PIIM ++M IQ KM+P   D  Q  ++  +PVVF F   +FP+GL++
Sbjct: 457 -----------VTPIIMGVTMVIQQKMTPSQMDPVQQKMMMALPVVFTFMFLNFPSGLVL 505

Query: 541 YWSWSNVISIVQQAVIMKM 559
           YW  +NV++I+QQ  I + 
Sbjct: 506 YWLVNNVLTIIQQYYINRS 524


>gi|307731536|ref|YP_003908760.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Burkholderia sp. CCGE1003]
 gi|307586071|gb|ADN59469.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Burkholderia sp. CCGE1003]
          Length = 552

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 147/575 (25%), Positives = 237/575 (41%), Gaps = 44/575 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M+        I     ++    WQ        F+      +         T       D 
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTAGSAAPGTTTPGTQPADL 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
                       A + S  V+       G I+ +G     L+L            +V  L
Sbjct: 61  PATNAAAPANTPAATQSQLVKFSTDVYSGEIDTRGGTLSKLSLVK--EGDGKQPDLVITL 118

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILF 168
                 + Y A    +   +     +  T+       +        L F+        + 
Sbjct: 119 FDRTGNHTYLARTGLLG-GDFPNHNDVYTLMPNQQTDLKGDQKSFSLSFESPVKGGLKVI 177

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDK 227
           +        Y+  +   + N     +  S    ++R      T  F     G        
Sbjct: 178 KTYTFTRGSYVIGVDTKIQNVGTTPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQH 237

Query: 228 SLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
              +  + DI+K+      +  N W+ +   Y+AS +IP +               A Y+
Sbjct: 238 HFQKMTFGDIDKNKEDYAKQADNGWIAMVQHYFASAWIPQQG--VKRDIYVEKIDPALYR 295

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
                    I PG+++  +  LFAG +E   +         P  E++ D+GW   IAKP+
Sbjct: 296 VGVKQPVAAIAPGQTVDVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPL 350

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+   ++ VGN+G AI+L T+ +K +FFPL+   Y S A MK I P++  LRE+FK  
Sbjct: 351 FWLLEKIHSYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG- 409

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+
Sbjct: 410 DPQKMNAALMELYKTEKVNPFGGCLPVVVQIPVFISLYWVLLSSVEMRGAPWILWIHDLS 469

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
             DP                     I P++M++SMF+Q K++P P D  QA ++ +MP+ 
Sbjct: 470 QQDPYF-------------------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIA 510

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           F      FPAGL++Y+  +NV+SI QQ  I +M G
Sbjct: 511 FSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545


>gi|239993746|ref|ZP_04714270.1| inner membrane protein, 60 kDa [Alteromonas macleodii ATCC 27126]
          Length = 552

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 146/577 (25%), Positives = 264/577 (45%), Gaps = 44/577 (7%)

Query: 1   MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           ME   +   + +AL S ++  +WQ  Y    +  +  ++    +   P+  +N    V  
Sbjct: 1   MESQRSFLIIGLALVSFLLWQSWQKDYGPQPVVPVEQQQTQETSQGVPSFNENGSEDVPS 60

Query: 59  DDRAQAL-------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
            D   A        S +  +E+K  +L   I+L G      +L  + ++  S+ P   L 
Sbjct: 61  SDSVPAAQPIAAAQSSNRIIEVKTDTLDLRIDLLGGDVVSADLLKFPVEQGSDIPYSLLR 120

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLIS--GKILTPTTPIKLVFKNANNILFE 169
           S +     Y A+   +         +   V+N  S   ++ + T  I L +KN   +   
Sbjct: 121 SGNG---LYVAQSGLIGAQGPDASSSGRPVYNAQSDYYEMTSDTLVIPLTWKNNQGLSVT 177

Query: 170 RTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
           +T +     Y   +  +V N +       P  ++ +           +     A    + 
Sbjct: 178 KTFTFTKGQYDVNVSYSVENGTGSAATVQPYAQLKQVMEFEDDGNMFMPTYRGAAFSTED 237

Query: 229 LVEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              QKY  D  +           W+G+ + Y+ S ++PS+E +     + L + +A    
Sbjct: 238 DRYQKYSFDEIEDDNLRETTKAGWVGMLEHYFVSAWVPSQEQTNTLYSRNLKNQYAV--I 295

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
              +   ++ PG++ T  + L+ G K+  ++    +       ++ +D+G  ++I++P+F
Sbjct: 296 GVLSPSESVAPGETKTLASTLYMGPKDQESLAKIAR-----GLDLTVDYGILFWISQPLF 350

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+++ ++LV N+G+AI+L T+ VK   + L KKQY S A M+N+ PK+ +L+++F    
Sbjct: 351 ALLTFLHSLVNNWGVAIILITIVVKGAMYWLTKKQYESMARMRNLAPKMQQLKDRFGD-D 409

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + +AM++LY+   +NP+ GC P+LLQ+P+F A+Y V+  S+E+RHA F  WI DL+ 
Sbjct: 410 RQKMSQAMMELYRKEKVNPMGGCLPLLLQMPIFLALYWVLMESVELRHADFVLWITDLST 469

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     + PI+   SM++  K+ P    D  Q  I+ WMPV 
Sbjct: 470 KDPYF-------------------VLPILTGASMYLLQKLQPTTITDPMQQKIMQWMPVA 510

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                  FPAGL++YW  SNVI++VQ  +I       
Sbjct: 511 MSVFFLWFPAGLVLYWLVSNVITLVQAKMIYASMEKR 547


>gi|169634939|ref|YP_001708675.1| putative inner membrane protein translocase component YidC
           [Acinetobacter baumannii SDF]
 gi|184156329|ref|YP_001844668.1| putative inner membrane protein translocase component YidC
           [Acinetobacter baumannii ACICU]
 gi|260558089|ref|ZP_05830300.1| membrane protein insertase, YidC/Oxa1 family domain [Acinetobacter
           baumannii ATCC 19606]
 gi|332873303|ref|ZP_08441258.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Acinetobacter baumannii 6014059]
 gi|169153731|emb|CAP02932.1| Inner membrane protein (IMP) integration factor; binds TM regions
           of nascent IMPs; required for Sec-independent IMP
           integration; associated with the Sec translocase
           [Acinetobacter baumannii]
 gi|183207923|gb|ACC55321.1| Preprotein translocase subunit YidC [Acinetobacter baumannii ACICU]
 gi|260408443|gb|EEX01750.1| membrane protein insertase, YidC/Oxa1 family domain [Acinetobacter
           baumannii ATCC 19606]
 gi|332738509|gb|EGJ69381.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Acinetobacter baumannii 6014059]
          Length = 586

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 137/588 (23%), Positives = 242/588 (41%), Gaps = 67/588 (11%)

Query: 11  IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
              + +++ AWQ  Y                 E++ +  N +T    + V  +  A    
Sbjct: 14  FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVASDVPQANIAQSQT 73

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A A      + ++       IN KG     + L  +     SN P V L + +     
Sbjct: 74  TDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPFVMLENDAK--RT 131

Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164
           Y A+   +             ++                  SG      T   +      
Sbjct: 132 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKVLTVPMVFKTPEG 191

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220
             + +        Y   +   V N S    +    G++ R   +     +   F +    
Sbjct: 192 VEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 251

Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271
               G       + K+++  +  ++       W+ +   Y+ S +IP       +    +
Sbjct: 252 GGAWGTPDAHYNKLKFANFSEEKLN-TEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQPY 310

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            ++ +            F++  I +  G S+     L++G K    +             
Sbjct: 311 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 365

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ 
Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 425

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           I P++  ++E+F         + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+
Sbjct: 426 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+RHAP+ GWI+DL+A DP                     I P+IM  +MF Q  ++P P
Sbjct: 485 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 525

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           AD  QA +   MP++F   +  FPAGL++YW  +N I+I+QQ  I K 
Sbjct: 526 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINKS 573


>gi|238753999|ref|ZP_04615358.1| hypothetical protein yruck0001_29200 [Yersinia ruckeri ATCC 29473]
 gi|238707751|gb|EEQ00110.1| hypothetical protein yruck0001_29200 [Yersinia ruckeri ATCC 29473]
          Length = 529

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 139/556 (25%), Positives = 236/556 (42%), Gaps = 54/556 (9%)

Query: 16  IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75
           +I  AWQ       + +   +  N  T    +Q               A      + +K 
Sbjct: 1   MIWQAWQVDNNPQTVAQTTQQTSNAATGDTASQAVP------------ASGQGQLITVKT 48

Query: 76  PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135
             L  +IN +G   +  NL  Y   + S+     L   +     Y A+            
Sbjct: 49  DVLSLTINTRGGDIEQANLLAYPDSLGSDKTFELL--ETTPAFVYQAQSGLTGKNGPDNP 106

Query: 136 PNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL-FKIVDTVTNN 189
            N        +              I L F   +  +F +T  +  +     +   V N 
Sbjct: 107 ANGERPLFAAAQNSFVLADGQDELRIPLTFTAKDGSVFTKTFIVKRNDYAIGVDYQVKNA 166

Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQKY-SDIEKSSIS 243
           S   +  +  G++ +         T +N F +     A         QKY  D  + +  
Sbjct: 167 SAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDEDNYQKYAFDKIEKNPL 226

Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303
           N      W+ +  +Y+A+ +IP       + F     G+      F    + + PG+   
Sbjct: 227 NITTKGGWVAMLQQYFATAWIPEANE--TNTFYSADLGNGLAAIGFKGTPVVVQPGEQKQ 284

Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363
               L+ G +    +         P  ++ +D+GW +FI++P+F L+ + +  VGN+G +
Sbjct: 285 LAATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFKLLKFIHGFVGNWGFS 339

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q + + M+ LYK   
Sbjct: 340 IIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERIGDDK-QRMSQEMMALYKAEK 398

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A DP             
Sbjct: 399 VNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYY----------- 447

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
                   I PI+M ++MF   KMSP    D  Q  I+ +MPV+F      FPAGL++Y+
Sbjct: 448 --------ILPILMGITMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGLVLYY 499

Query: 543 SWSNVISIVQQAVIMK 558
             SN+++I+QQ +I +
Sbjct: 500 IVSNLVTILQQQLIYR 515


>gi|238028969|ref|YP_002913200.1| putative inner membrane protein translocase component YidC
           [Burkholderia glumae BGR1]
 gi|237878163|gb|ACR30496.1| Putative inner membrane protein translocase component YidC
           [Burkholderia glumae BGR1]
          Length = 553

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 147/584 (25%), Positives = 238/584 (40%), Gaps = 52/584 (8%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M+        I     ++    WQ        F+       +   +    T         
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRAHGRQSMFFPNVTQTNVAASKGGADTGASAASGAT 60

Query: 52  ---SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
                A+         ++ +  V        G I+ +G     L L+           + 
Sbjct: 61  AALPAASTQAPAATTPIAQAQLVPFSTDVYDGEIDTRGGTLTKLTLKK--EGDGKQPDLF 118

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV-----FKNA 163
             L      + Y A             PN N ++  +SG          L       +  
Sbjct: 119 VTLFDHTKDHTYLARTGVTGGN----FPNHNDLFTPLSGPRSLAAGQDTLKLSFESQEKG 174

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIA 222
              + +        Y+  +   + N     +  +    I+R      T  F     G   
Sbjct: 175 GVKVVKTYTFTRGSYVIGVDTKIENVGTAPVTPTVYMEIVRDSTPVETPLFSHTFLGPAV 234

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281
               K   +  +SDI+K+         N W+ +   Y+AS +IP                
Sbjct: 235 YTDQKHFQKITFSDIDKNKAEYVTSADNGWVAMVQHYFASAWIPQAG--VKRDIYVEKID 292

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
            + Y+        TI PG+S   +  LFAG +E   +         P  +++ D+GW   
Sbjct: 293 PSLYRIGVKEPVKTIEPGQSADVSARLFAGPEEERVLEGIA-----PGLDLVKDYGWVTI 347

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           IAKP+F L+   +  VGN+G +I+L TV +K +FFPL+   Y S A MK I P++ +LRE
Sbjct: 348 IAKPLFWLLQKIHGYVGNWGWSIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQQLRE 407

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           +F +S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  W
Sbjct: 408 RF-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILW 466

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
           I DL+  DP                     I P++M+ SMF+Q +++P P D  QA ++ 
Sbjct: 467 IHDLSQRDPYF-------------------ILPVLMAGSMFLQTRLNPTPPDPVQAKMMM 507

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           +MP+ F      FPAGL++Y+  +NV+SI QQ  I +  G +  
Sbjct: 508 FMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRAIGNKKK 551


>gi|169797810|ref|YP_001715603.1| putative inner membrane protein translocase component YidC
           [Acinetobacter baumannii AYE]
 gi|213155394|ref|YP_002317439.1| inner membrane protein OxaA [Acinetobacter baumannii AB0057]
 gi|215485157|ref|YP_002327398.1| Inner membrane protein oxaA [Acinetobacter baumannii AB307-0294]
 gi|301345949|ref|ZP_07226690.1| putative inner membrane protein translocase component YidC
           [Acinetobacter baumannii AB056]
 gi|301510086|ref|ZP_07235323.1| putative inner membrane protein translocase component YidC
           [Acinetobacter baumannii AB058]
 gi|301594676|ref|ZP_07239684.1| putative inner membrane protein translocase component YidC
           [Acinetobacter baumannii AB059]
 gi|332854709|ref|ZP_08435496.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Acinetobacter baumannii 6013150]
 gi|332865589|ref|ZP_08436429.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Acinetobacter baumannii 6013113]
 gi|169150737|emb|CAM88649.1| Inner membrane protein (IMP) integration factor; binds TM regions
           of nascent IMPs; required for Sec-independent IMP
           integration; associated with the Sec translocase
           [Acinetobacter baumannii AYE]
 gi|213054554|gb|ACJ39456.1| inner membrane protein OxaA [Acinetobacter baumannii AB0057]
 gi|213985979|gb|ACJ56278.1| Inner membrane protein oxaA [Acinetobacter baumannii AB307-0294]
 gi|332727866|gb|EGJ59268.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Acinetobacter baumannii 6013150]
 gi|332735241|gb|EGJ66318.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Acinetobacter baumannii 6013113]
          Length = 586

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 137/588 (23%), Positives = 242/588 (41%), Gaps = 67/588 (11%)

Query: 11  IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
              + +++ AWQ  Y                 E++ +  N +T    + V  +  A    
Sbjct: 14  FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVASDVPQANIAQSQT 73

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A A      + ++       IN KG     + L  +     SN P V L + +     
Sbjct: 74  TDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPFVMLENDAK--RT 131

Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164
           Y A+   +             ++                  SG      T   +      
Sbjct: 132 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKVLTVPMVFKTPEG 191

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220
             + +        Y   +   V N S    +    G++ R   +     +   F +    
Sbjct: 192 VEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 251

Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271
               G       + K+++  +  ++       W+ +   Y+ S +IP       +    +
Sbjct: 252 GGAWGTPDAHYNKLKFANFSEEKLN-TEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQPY 310

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            ++ +            F++  I +  G S+     L++G K    +             
Sbjct: 311 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 365

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ 
Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 425

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           I P++  ++E+F         + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+
Sbjct: 426 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+RHAP+ GWI+DL+A DP                     I P+IM  +MF Q  ++P P
Sbjct: 485 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 525

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           AD  QA +   MP++F   +  FPAGL++YW  +N I+I+QQ  I K 
Sbjct: 526 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINKS 573


>gi|296157622|ref|ZP_06840457.1| membrane protein insertase [Burkholderia sp. Ch1-1]
 gi|295892394|gb|EFG72177.1| membrane protein insertase [Burkholderia sp. Ch1-1]
          Length = 552

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 146/575 (25%), Positives = 238/575 (41%), Gaps = 44/575 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M+        I     ++    WQ        F+      +         T       D 
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTVGGAAPGTTTPGTQPADL 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
                     A A + S  ++       G I+ +G     L+L           P + + 
Sbjct: 61  PATNAAAPGNAPAATQSQLIKFNTDVYSGEIDTRGGTLSKLSLVN---KGDGKQPDLVIT 117

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILF 168
               T N  +     +   +     +  T        +       +L F+        + 
Sbjct: 118 LFDRTANHTYLARTGLLGGDFPNHNDIYTPLPNQPHDLTGDEKSFQLSFESPVKGGLKVI 177

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDK 227
           +        Y+  +   + N     +  S    ++R      T  F     G        
Sbjct: 178 KTYTFTRGSYVIGVDTKIQNVGATPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQH 237

Query: 228 SLVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
              +  + DI+K+         N W+ +   Y+AS +IP +               A Y+
Sbjct: 238 HFQKMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQG--VKRDIYVEKIDPALYR 295

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
                   TI PG+++  +  LFAG +E   +         P  E++ D+GW   IAKP+
Sbjct: 296 VGVKEPVPTIAPGQTVDVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPL 350

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+   ++ VGN+G +I+L T+ +K +FFPL+   Y S A MK I P++  LRE+FK  
Sbjct: 351 FWLLEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG- 409

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+
Sbjct: 410 DPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLS 469

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
             DP                     I P++M++SMF+Q K++P P D  QA ++ +MP+ 
Sbjct: 470 QQDPFF-------------------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIA 510

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           F      FPAGL++Y+  +NV+SI QQ  I +M G
Sbjct: 511 FSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545


>gi|255020154|ref|ZP_05292223.1| OxaI/YidC membrane insertion protein [Acidithiobacillus caldus ATCC
           51756]
 gi|254970296|gb|EET27789.1| OxaI/YidC membrane insertion protein [Acidithiobacillus caldus ATCC
           51756]
          Length = 538

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 149/575 (25%), Positives = 247/575 (42%), Gaps = 60/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51
           M+      +A+ LS+I++  ++ +                Q+                  
Sbjct: 1   MDTQR-TLLAVVLSIIVLVLYEQWMAPKPTHPAAAPTAVTQSATAKPAPAPTSATATAPS 59

Query: 52  -------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                  S            L+ +P V        GS++L G     L L+ Y    S  
Sbjct: 60  TSAAATLSGTVTSGLASPAELAAAPSVPFATQVYQGSVSLLGGDIVHLGLKHYPTSSSDK 119

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
           +P   L                  T         +        ++L  T    +    A 
Sbjct: 120 APYPIL-----------TPESARLTLQQSGFRALDGQILQGRYRLLQDTGHTLIFQGEAG 168

Query: 165 NILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
            +  E+T+    + YL      VTN        S   +I+R+    +     +  G + +
Sbjct: 169 PLRIEKTLEFAPDSYLIHETVRVTNGGSSDWNGSYLDQILRNDRSESHWFMSIFTGAVLM 228

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
               S  E+ +SD+           + W G++D Y+    +P  + +     +       
Sbjct: 229 HN-GSFSEKSFSDLRSHPED--WSGSGWAGMTDHYFLEAILPEPKATGQIYARAEGPNS- 284

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
              A  +     + PG+S T    L+ G KE  T+    +       E  +D+GWF  IA
Sbjct: 285 --VAGVAVALPRLAPGQSTTIEQDLYLGPKEQKTLSSLGR-----GLEQTVDYGWFAIIA 337

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           +PM  ++S+F++  GN+G+AI+L  + VK+LFF  +   Y S ANM+ +QPK+++++ K 
Sbjct: 338 EPMHGVLSWFHSWTGNWGLAIVLLVLAVKILFFYPSAISYRSMANMRKLQPKLEQIK-KQ 396

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                Q +  AM++LY++  +NP+AGC PI++Q+PVF A+Y V+  S+ +R APF  WI 
Sbjct: 397 YGEDRQKMGAAMMELYRSEKVNPMAGCLPIVIQMPVFIALYWVLVESVSLRMAPFVLWIH 456

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DLAA DP                     I P++M +SMFIQ +++P P D  Q  IL+ +
Sbjct: 457 DLAAPDPYY-------------------ILPLLMGVSMFIQQRLNPAPMDPMQKKILSAL 497

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           PV+F    S FPAGL++YW  +NV+SI QQ +I +
Sbjct: 498 PVIFAIFFSFFPAGLVLYWLTNNVVSIAQQYLITR 532


>gi|313669125|ref|YP_004049409.1| integral membrane protein [Neisseria lactamica ST-640]
 gi|313006587|emb|CBN88052.1| putative integral membrane protein [Neisseria lactamica 020-06]
          Length = 545

 Score =  326 bits (834), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 138/575 (24%), Positives = 234/575 (40%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q V    +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPTPQQAAQQQAVTASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      + P V  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDEHKPFV--LFGDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +      ++L     N +  ++  +     YL
Sbjct: 104 VAQSELLDAQGNNVLKGIGFTAAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237
             +   +TN        S   RI+R + Q     +      G +    +    +  +SD+
Sbjct: 164 VNVRFDITNTGGKPANLSADYRIVRDRSQPEGQGYFTRSYLGPVVYTPEGGFQKVGFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +                      
Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCAAGECNIDIKRRNDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A        I  G    T   L+AG +    I          + ++  D+G  ++ A 
Sbjct: 284 YSASVGVPLAAIPAGAKAETAVNLYAGPQTTSVIAGIAD-----KLQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ +DP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRSDPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|294341966|emb|CAZ90395.1| Inner membrane protein oxaA [Thiomonas sp. 3As]
          Length = 565

 Score =  326 bits (834), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 134/583 (22%), Positives = 229/583 (39%), Gaps = 51/583 (8%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDNS 52
                  + +  ++ +++ + ++         +  P              V Q      +
Sbjct: 1   MDLRRSVLWVVFTMSMIFLYNSWLRYNGETDLFGTPPAHPAQVASAPTSAVPQAAPTAAT 60

Query: 53  YAAVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
              +        LS                ++   +   I+ +G       L  Y    +
Sbjct: 61  PPNIAGAAATAPLSAPVAAASAAPAAQLTTIRTDLMDVKISSRGGNLVYAKLLKY-ESRT 119

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
                V L   + + N Y A+   +             +                +    
Sbjct: 120 EPGKNVILFDDTPS-NIYMAQSGLIGGDFPNHETEMTVLPGPRDMGNAKTLQVKLVSPDL 178

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ---TATNTFGVQEG 219
               L        + Y+  + +T+TN     +      +++R         ++ +    G
Sbjct: 179 GGIKLERTYTFTRDSYVVNVQNTITNTGSVAVAPQMYMQLVRDGNTPAGDESHFYHTYTG 238

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                      + ++ D++ +  +     + W+ +   Y+ S ++P              
Sbjct: 239 PAYYDNANKFQKFEFKDLKTNE-APKKADSGWVAMIQHYFVSAWVPE-PYEGSRDLYTRK 296

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
            G   Y          I PGKSITT   LF G +   T+         P  E++ D+GW 
Sbjct: 297 LGDNLYAVGVIQPLSQIAPGKSITTDAKLFVGPELESTLGALA-----PGLELVKDYGWV 351

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             +AKP+F L+   + +V N+G +I++ T+ +KL FFPL    Y S A MK + P+I+ L
Sbjct: 352 TILAKPIFWLLEMIHKVVQNWGWSIIVLTLLIKLAFFPLTAASYKSMARMKAVGPRINAL 411

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           RE +K    ++  +AM++LY+   INPL GC PI++QIPVF A+Y V+  S+E+R AP+ 
Sbjct: 412 RESYKGDQAKM-NQAMVELYRKEKINPLGGCLPIVIQIPVFIALYWVLLSSVELRGAPWI 470

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            WI DL+A DP                     I P IM+ + F+Q+K++P P D  QA +
Sbjct: 471 LWIHDLSAKDPYY-------------------ILPAIMTATSFLQVKLNPTPPDPMQARL 511

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           +  MP  F      FPAGL++YW  +N  SI QQ  I K  G 
Sbjct: 512 MWIMPAAFSIMFFFFPAGLVLYWLTNNTTSIAQQWFINKKMGV 554


>gi|262374715|ref|ZP_06067987.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter junii
           SH205]
 gi|262310371|gb|EEY91463.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter junii
           SH205]
          Length = 585

 Score =  326 bits (834), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 138/588 (23%), Positives = 245/588 (41%), Gaps = 68/588 (11%)

Query: 11  IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
              + +++ AWQ  Y +               E++ +  N Q     + +  +       
Sbjct: 14  FVTAYLLILAWQKDYGHAQPAPQQQAAAVTTHEVSADLPNAQNATAASDLPQAN-VTASQ 72

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
              +       + +K       IN KG     + L  +     S  P V L   S+ K  
Sbjct: 73  TTEKPSVNQQLISVKTDLYHLWINPKGGDIVRVELLSHDESKDSEKPFVML--ESDAKRT 130

Query: 120 YFAELDYVSTANNIELPNSNTVWNLI--------------SGKILTPTTPIKLVFKNANN 165
           Y A+   +         +    +++                 +       + LVFK    
Sbjct: 131 YVAQSGLIGLNGPDSSRSGRPTYDVEKTTYTLADAKSITTQDEKKQQVLTVPLVFKTPEG 190

Query: 166 ILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220
           +   ++ +     Y   +   V N S    +    G++ R         +   F +    
Sbjct: 191 VEIIKSFTFTQGDYPITVKHQVINRSQQNWQGQMFGQLKRDNSDDPGKSSQGIFTLGTYL 250

Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271
               G       + K+ +     ++       W+ I   Y+ S +IP       +    +
Sbjct: 251 GGAWGTPEEHYNKLKFENFNDEKLN-VEAKGGWVAIVQHYFVSAWIPGNLKLTQADGQPY 309

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            ++ +            F++  I +  G S+     L++G K    +             
Sbjct: 310 TAKLESRQSTDGMNIIGFTSPVINVPAGTSMEVDAKLYSGPKIQSELKDLAD-----GLN 364

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+GW + IAK +F+ + +F+NLVGN+G +I+L T+ VKL+ +PL+ K Y S A M+ 
Sbjct: 365 QTVDYGWLWPIAKLLFLGLQFFHNLVGNWGWSIILLTILVKLILWPLSSKSYRSMAKMRV 424

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           I P++  ++E+F         + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+
Sbjct: 425 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 483

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+RHAP+ GWI+DL+A DP                     I P+IM ++M++Q  ++P P
Sbjct: 484 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGVTMYVQQMLNPQP 524

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            D  QA +   MP++F   +  FPAGL++YW  +N I+I+QQ+ I K 
Sbjct: 525 TDPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINKS 572


>gi|239503913|ref|ZP_04663223.1| putative inner membrane protein translocase component YidC
           [Acinetobacter baumannii AB900]
          Length = 586

 Score =  326 bits (834), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 137/588 (23%), Positives = 242/588 (41%), Gaps = 67/588 (11%)

Query: 11  IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
              + +++ AWQ  Y                 E++ +  N +T    + V  +  A    
Sbjct: 14  FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVASDVPQANIAQSQT 73

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A A      + ++       IN KG     + L  +     SN P V L + +     
Sbjct: 74  TDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPFVMLENDAK--RT 131

Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164
           Y A+   +             ++                  SG      T   +      
Sbjct: 132 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKVLTVPMVFKTPEG 191

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220
             + +        Y   +   V N S    +    G++ R   +     +   F +    
Sbjct: 192 VEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 251

Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271
               G       + K+++  +  ++       W+ +   Y+ S +IP       +    +
Sbjct: 252 GGAWGTPDAHYNKLKFANFSEEKLN-TEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQPY 310

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            ++ +            F++  I +  G S+     L++G K    +             
Sbjct: 311 VAKLESRQSADNMNIIGFTSPVINVPVGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 365

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ 
Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 425

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           I P++  ++E+F         + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+
Sbjct: 426 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+RHAP+ GWI+DL+A DP                     I P+IM  +MF Q  ++P P
Sbjct: 485 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 525

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           AD  QA +   MP++F   +  FPAGL++YW  +N I+I+QQ  I K 
Sbjct: 526 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINKS 573


>gi|220936473|ref|YP_002515372.1| protein translocase subunit YidC [Thioalkalivibrio sp. HL-EbGR7]
 gi|254778168|sp|B8GRD1|OXAA_THISH RecName: Full=Inner membrane protein oxaA
 gi|219997783|gb|ACL74385.1| protein translocase subunit YidC [Thioalkalivibrio sp. HL-EbGR7]
          Length = 557

 Score =  326 bits (834), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 133/577 (23%), Positives = 248/577 (42%), Gaps = 48/577 (8%)

Query: 1   MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQ---TVKQPNQVDNSYAA 55
           M+          + +  +I  AW   Y    +     + + +        P  V ++  +
Sbjct: 1   MDNLRPVLYLSMLLVLFLIWQAWNRDYGPQPVAAPGAQEQVMDRDGVPAPPQDVPDAPVS 60

Query: 56  VLIDDRAQALSMSP---RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
             +D   +     P   R+ +    L   I+ +G      +L  Y + + +    + LL 
Sbjct: 61  EAVDAPTEVAPAEPDRRRIRVVTDVLDIEIDTRGGDLVRADLPTYPVSLRTPDQPIRLLD 120

Query: 113 PSNTKNAYFAELDYVST-----ANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNA 163
                  Y A+   +       +     P+ + ++     +           + L + + 
Sbjct: 121 ER--FRQYVAQSGLIHDRVPGVSGEGRAPSHHAIFQAERDEFRLADGQDELRVPLTWTSE 178

Query: 164 NNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
           + +   +T +     +L  +   V NNS          +I      +  + F      +A
Sbjct: 179 DGVQVTKTYTFRRGDFLINVDHAVRNNSDQPWVGRQYRQIRHGSTPSRESWFLYTFTGVA 238

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDG 281
                   +    D+    +        W+ I   Y+ + ++P +        + L +  
Sbjct: 239 YHD-GRYEKLSLEDMAGKPLDK-DVQGGWISIIQHYFLTAWVPFEHEINQFYTRVLGTPA 296

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
              +     +   T  PG+    T+  + G KE   +   +     P  E+ +D+G   F
Sbjct: 297 RPEHIIGMRSEAQTAAPGEETVFTSRFWVGPKEQAALKAIQ-----PGLELTVDYGMLSF 351

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           +AKP+F ++ + +N+VGN+G AI++ T+ +KL+F+ L++  Y S A M+ +QPK+ +L++
Sbjct: 352 LAKPLFWVLDWIHNVVGNWGWAIIILTILIKLVFYKLSETSYRSMAKMRAVQPKMMQLKD 411

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           ++     Q + +A+++LYK   INPL GC PIL+QIPVF A+Y V+  S+EMR AP+  W
Sbjct: 412 RYGDDK-QRMNQALMELYKKEKINPLGGCLPILVQIPVFIALYWVLLESVEMRQAPWILW 470

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
           I+DL+  DP                     I PI+M ++M  Q K++P P D  Q  ++ 
Sbjct: 471 IQDLSVRDPYF-------------------ILPILMGVTMIAQYKLNPAPMDPIQQKLMM 511

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            +P VF    + FPAGL++YW  +N++SI QQ  I +
Sbjct: 512 ALPFVFTVFFAFFPAGLVLYWFVNNLLSIAQQWYITR 548


>gi|261380787|ref|ZP_05985360.1| membrane protein insertase, YidC/Oxa1 family [Neisseria subflava
           NJ9703]
 gi|284796252|gb|EFC51599.1| membrane protein insertase, YidC/Oxa1 family [Neisseria subflava
           NJ9703]
          Length = 548

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 139/575 (24%), Positives = 236/575 (41%), Gaps = 55/575 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A+SV I   W++F+  P+               Q      + A      
Sbjct: 1   MDF-KRLMAFFAISVAIFAGWEHFFPSPKP-----------NPAQQAAQQQTAATPAKVA 48

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              AL+ +  + +   ++   I+ K      L L  Y      + P V  L     +  Y
Sbjct: 49  AEAALTPASPITVTTDTVKAVIDEKSGDLRQLTLLQYKATGDEHKPFV--LFNDGKEYIY 106

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L   +         +      ++L     N +  ++  +     YL
Sbjct: 107 VAQSELLDAQGNNVLKGISFTAPQKQYSLKGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 166

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237
             +   +TN+    +  S   RI+R   +     +      G +    +    +  +SD+
Sbjct: 167 VNVRFDITNSKGQPVNLSADYRIVRDHSEPEGQGYFTRSYVGPVVYTPEGGFQKVSFSDL 226

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +                      
Sbjct: 227 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKDGQSVCSAGECNIDIKRRNDNL 286

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A  S     I  G    T   L+AG +    I +        + ++  D+G  ++ A 
Sbjct: 287 YSASVSVPLAAIQAGAKAETAINLYAGPQTTSVIANIAD-----KLQLAKDYGKVHWFAS 341

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 342 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 401

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 402 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 460

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+  DP                     I P IM+ +MF Q  ++PP  D  QA ++  MP
Sbjct: 461 LSRPDPFY-------------------ILPFIMAATMFAQTYLNPPSTDPMQAKMMKVMP 501

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           ++F      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 502 LIFSIMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 536


>gi|260774544|ref|ZP_05883457.1| OxaI/YidC membrane insertion protein [Vibrio metschnikovii CIP
           69.14]
 gi|260610450|gb|EEX35656.1| OxaI/YidC membrane insertion protein [Vibrio metschnikovii CIP
           69.14]
          Length = 540

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 142/570 (24%), Positives = 246/570 (43%), Gaps = 42/570 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q +           E+    T        + +       
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWQAAKNPAPQVIEQAQTSTTAPAPSFADEFDPAPEQH 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           RA A +++   +     L  SI+  G       L  Y  +++S++P   L +  N  + +
Sbjct: 60  RAAAQTVTVTTD----VLTLSIDTVGGDIIHALLNQYADELNSSTPFTLLRNDPN--HLF 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176
            A+   +         N   V+++            +L     ++       +  I    
Sbjct: 114 IAQSGLIGPQGIDLSSNHRPVYHVDGDHFALADGEQELRIPMTYQANGIEYVKTFIVRRG 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   V N S +         + +    +  +       G      D    +  + 
Sbjct: 174 DYAVDVTFDVINRSGNNATLGMYAHLRQTLLDSGGSLAMPTYRGGAYSTEDTRYKKFSFK 233

Query: 236 DIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           D++  ++S        W  +   Y+AS +IP  E   +   + + +              
Sbjct: 234 DMQDRNLSLPLPNGQGWAAMIQHYFASAWIPRNEPGTNLYSRVIGNVGD---IGVRMPNK 290

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           TI  G +   T  L+ G K    +         P  ++++D+GW +FIAKP+  L+S+  
Sbjct: 291 TIADGDATQFTATLWVGPKLQNDMAATA-----PNLDLVVDYGWLWFIAKPLHTLLSFIQ 345

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           + VGN+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + 
Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK   +NPL GC PILLQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP    
Sbjct: 405 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    
Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPNTITDPMQQKIMTFMPVMFTFFFLF 505

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW  SN+++++QQ +I +     
Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYRSLEKR 535


>gi|119475233|ref|ZP_01615586.1| putative inner membrane protein translocase component YidC [marine
           gamma proteobacterium HTCC2143]
 gi|119451436|gb|EAW32669.1| putative inner membrane protein translocase component YidC [marine
           gamma proteobacterium HTCC2143]
          Length = 569

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 162/595 (27%), Positives = 259/595 (43%), Gaps = 61/595 (10%)

Query: 1   MERNWNYFVA--IALSVIIVYAWQNFYVYPR----------------------IEEMNNE 36
           M+      +    ALS +++  W  F                             EM N 
Sbjct: 1   MDFQRYLLIGSIAALSFMLLTEWVQFKEQNSGNNVVAAYQLQQGPVTGDNASRSSEMPNA 60

Query: 37  RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96
           +    T    N    ++      +   A +   R+++K   L   IN  G          
Sbjct: 61  QTPNGTQIDSNVDIPTFEQESSGNEIAASNTISRIKVKTDMLEIDINTLGGDIIFAAFPK 120

Query: 97  YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156
           ++  + +     TLL  SN +  Y A+   +               +  +  +L+ +   
Sbjct: 121 HYAKLDTPEIPFTLLEQSN-RLTYIAQSGLIGVNGIDTAKGRARFTSAKTEYVLSDSEDE 179

Query: 157 K---LVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT- 211
               LVF++ + +   +        YL  +   V NNS         G++ R      + 
Sbjct: 180 MAVDLVFQSNDPVSITKRFHFTRGEYLIGVEYIVKNNSEMPWSGGMFGQLKRDNSPDPSA 239

Query: 212 ----NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267
                      G    L D+   +  + DIE++S    +    W+ I   Y+ S ++P+ 
Sbjct: 240 DTSGMGLAPYLGAAINLPDEPYKKVSFDDIEENSFPKQNIEGGWVAIIQHYFTSAWVPNA 299

Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327
           + +     +   DG       F++ +IT+  G +    + L+ G K+   +         
Sbjct: 300 KQTHAYSMRKTKDGAN--IVGFTSPQITVAAGATGDVKSELYIGPKDQYRLEEIS----- 352

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           P  E+ +D+G  ++IA+P+F L++  +  +GN+G AI+  T+ VK  FF L  K Y S A
Sbjct: 353 PGLELTVDYGILWWIAQPLFWLLTKLHGYLGNWGFAIIAVTILVKAAFFQLNAKAYTSMA 412

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           NM+ +QPK+  LRE++     Q   + M+ LYK   INPL GC PIL+Q+PVF A+Y V+
Sbjct: 413 NMRKVQPKLTALRERYADDK-QKQSQEMMALYKREKINPLGGCLPILVQMPVFMALYWVL 471

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S+E+RHAPF G+IKDL+  DP                     I P+IM +SMFIQ + 
Sbjct: 472 MESVELRHAPFIGYIKDLSVMDPYF-------------------ILPLIMGVSMFIQQRF 512

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           +PPP D  QA I+ WMPV+F F    FPAGL++YW  +N +SI QQ +I K   A
Sbjct: 513 NPPPPDPMQAKIMQWMPVMFTFFFLFFPAGLVLYWVVNNTLSIAQQYLITKRIEA 567


>gi|124269009|ref|YP_001023013.1| protein translocase subunit yidC [Methylibium petroleiphilum PM1]
 gi|124261784|gb|ABM96778.1| protein translocase subunit yidC [Methylibium petroleiphilum PM1]
          Length = 553

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 148/584 (25%), Positives = 241/584 (41%), Gaps = 54/584 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M       + +  ++ +V  W  +  +     M               V    ++VL   
Sbjct: 1   MTDMRRTLLWVVFTMSLVLLWDAWNKHTGQPSMFAPAPRPVAAASAPGVTPPASSVLPSA 60

Query: 61  RAQALSMSP--------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
            A A +                  V +    L  +++ +G       L            
Sbjct: 61  TAVAPAAGSGAPPALVAPPATAPTVTVSTDVLKLTLDSRGGDVVHAELLTQVDQNDRTRN 120

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF-----K 161
           +V  L   + +  Y A+   V      +LPN  T + L+ G+         L       +
Sbjct: 121 VV--LFDRSKERVYLAQTGLV---GAPDLPNHLTAYTLVPGETSLAAGKDALEVVFESPE 175

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEG 219
                L +       +Y  ++   V N     +      +++R    P   ++ +    G
Sbjct: 176 QGGVKLRKTLTLQRGNYAVQVRHDVVNTGTAALSPQLYVQLVRDGNAPPGESSFYSTFTG 235

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
            +         +  +  IEK +  +     N W+ +   Y+ S ++ + +     +F   
Sbjct: 236 PVVYTDASKFHKVDFKSIEKGNTEHDKTADNGWVAMVQHYFFSAWLHNDKAPR--EFYTR 293

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
                 Y          I PG S    + LF G +E   +         P  E++ D+GW
Sbjct: 294 KIDVNLYAVGQLFPLGEIAPGASKQFDSVLFVGPQEEKKLETLA-----PGLELVKDYGW 348

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           F  IAKP+F L+   + L+GN+G AI+   V +K  F+ L  K Y S A MK I PKI E
Sbjct: 349 FTIIAKPLFWLLDQLHKLIGNWGWAIVALVVLLKAAFYWLNAKAYASMAKMKAINPKIME 408

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +RE+ K   PQ +Q+ M+++YK   +NPL GC PIL+Q+PVF A+Y V+  S+EMR+AP+
Sbjct: 409 MRERLKD-KPQQMQQEMMRIYKEEKVNPLGGCLPILVQMPVFIALYWVLLSSVEMRNAPW 467

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
            GWI DL+  DP                     I PI+M+ +  +Q  ++P P D  QA 
Sbjct: 468 LGWITDLSVRDPLF-------------------ILPIVMTGTTLLQTWLNPTPPDPMQAK 508

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           ++  MP+VF      FPAGL++YW  +N++SI QQ VI +  G 
Sbjct: 509 MMWIMPLVFSVMFFFFPAGLVLYWITNNLLSIAQQWVINRRLGV 552


>gi|312797629|ref|YP_004030551.1| 60 kDa inner membrane protein YIDC [Burkholderia rhizoxinica HKI
           454]
 gi|312169404|emb|CBW76407.1| 60 kDa inner membrane protein YIDC [Burkholderia rhizoxinica HKI
           454]
          Length = 554

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 150/583 (25%), Positives = 244/583 (41%), Gaps = 48/583 (8%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQ-----TVKQP 46
           M+        I    +++    WQ        F+      +               +   
Sbjct: 1   MDIKRTVLWVIFFMSVVMLYDNWQRDHGRLSLFFPNTTPTQTAASATPGTTTPGTQLADL 60

Query: 47  NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
            Q   S +A       Q +    ++  K     G I+  G     L+L     +     P
Sbjct: 61  PQTTESSSAPGTAPAMQPVVKGQQIHFKTDVYDGDISTVGGTLSRLSLVK---EGDGKQP 117

Query: 107 IVTL-LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
            + + L      + Y A    +             V    S      T  I L       
Sbjct: 118 NLYITLFDQTANHTYLARTGLIGGDFPNHNDVFTVVPGPTSLTDGANTVSISLESPVKAG 177

Query: 166 ILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAV 223
           +   +T +     Y+  +   + N     ++ +    ++R      T  F     G    
Sbjct: 178 VKVVKTYTFTRGSYVIGVDTKIENVGAAPVKPTVYMELVRDDTPVETPRFSHTFIGPAVY 237

Query: 224 LGDKSLVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                  +  +SD++K          N W+ +   Y+AS +IP +       F       
Sbjct: 238 TEQHKFQKMSFSDLDKGKQDYAPSADNGWVAMVQHYFASAWIPKEGAQRQ--FYADKFSQ 295

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
           A Y+        +I PG+S+     LFAG +E   +         P  E++ D+GW   I
Sbjct: 296 ALYRVGMKEPVQSIAPGQSVNVAARLFAGPQEERKLEKIA-----PGLELVKDYGWVTII 350

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           AKP+F L+   +  VGN+G AI+L T+ +K +FFPL+   Y S A MK I P++ ++RE+
Sbjct: 351 AKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQQIRER 410

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           F +S PQ +  A+++LYK+  +NP  GC PI++QIPVF ++Y V+  S+EMR AP+  WI
Sbjct: 411 F-KSDPQKMNAALMELYKSEKVNPFGGCLPIVIQIPVFISLYWVLLSSVEMRGAPWVLWI 469

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DL+  DP                     I P++M++SMF+Q K++P P D  QA ++ +
Sbjct: 470 HDLSQQDPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMF 510

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           MP+ F      FPAGL++Y+  +NV+SI QQ  I +M G +  
Sbjct: 511 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGKDKK 553


>gi|222056914|ref|YP_002539276.1| YidC translocase/secretase [Geobacter sp. FRC-32]
 gi|254772789|sp|B9M7R9|OXAA_GEOSF RecName: Full=Inner membrane protein oxaA
 gi|221566203|gb|ACM22175.1| YidC translocase/secretase [Geobacter sp. FRC-32]
          Length = 530

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 154/564 (27%), Positives = 259/564 (45%), Gaps = 36/564 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD-NSYAAVLID 59
           ME      +A+ LS++++YA+   +  P   +            QP+    ++  +V   
Sbjct: 1   ME--KRVVIAVILSIVVLYAFSYMFPPPVANQKEKAGPVAAVQSQPSSAKLSAIDSVPAA 58

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
              QA   +  + +     I   + KG       L+ Y     +    + L + S+    
Sbjct: 59  ATPQAGLAARNIVVDTDLFIAVFSTKGGGLQSFQLKHYKDKAGAVGRDIVLKNESDGDKL 118

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-Y 178
                          +  S+     ++G   T  + I+    +   ++ ++  S   + Y
Sbjct: 119 SLLSEGKSFGLEPSLVFQSSAKDTKLAG---TEKSSIEFTVTSQTGVILKKVYSFSGNGY 175

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
              +   + N    ++  +              +      G + + GDK +         
Sbjct: 176 GINLHQELINTGSSRVEGAISLINYNRLVAETGDGRYEVYGPVTMAGDKVIT--DKVSDI 233

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
                 F  + SW   +DKY+    I  K +   ++   +SD +   Q   +++ +++ P
Sbjct: 234 AKGPKQFDNNVSWSAFADKYFMDAVIAVKNSIASARVAKISDNY--VQTNVTSSPLSLNP 291

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
           G+S +    LF G K+   +          R E  ID+GWF  +AKP+   + +FY+   
Sbjct: 292 GQSASMDYRLFYGPKDLDILKAQGS-----RLEEAIDFGWFSALAKPLLRSIKFFYSYTH 346

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G+AI++ T+ +K+LFFPL  K Y S   M+ +QPK+ EL+EKFK      + +A++ L
Sbjct: 347 NYGLAIIIITIILKVLFFPLTHKSYKSMKEMQKLQPKMVELKEKFKNDRD-AMNRAVMDL 405

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YKTH +NP+ GC P+L+QIPVFFA+YK +  S+E+RHAPF  WI DL+A DP        
Sbjct: 406 YKTHKVNPMGGCLPMLVQIPVFFALYKALMFSIELRHAPFVLWITDLSAKDPYY------ 459

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
                        + PIIM ++MFIQ KM+P   D  QA ++  +PVVF F   +FPAGL
Sbjct: 460 -------------VTPIIMGVTMFIQQKMTPTNMDPIQAKMMLALPVVFTFMFLNFPAGL 506

Query: 539 IIYWSWSNVISIVQQAVIMKMHGA 562
           ++YW  +N+++I QQA I K   A
Sbjct: 507 VLYWLINNILTIAQQAYINKSLPA 530


>gi|326571816|gb|EGE21822.1| putative inner membrane protein translocase component YidC
           [Moraxella catarrhalis BC7]
          Length = 547

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 126/569 (22%), Positives = 234/569 (41%), Gaps = 42/569 (7%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M++     + IA+   + +++ AW++ Y    +       +         QV     ++ 
Sbjct: 1   MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTHADVPTTQVVGDIPSLT 60

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
               A  L+ +  + +        IN  G       L+ ++    S  P V L       
Sbjct: 61  AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETNS 116

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174
             Y A+   +               +  S         +  + L +      + +     
Sbjct: 117 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 176

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230
              Y   +   + NNS    +     ++ R   +          G+        G  S  
Sbjct: 177 AGQYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 236

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
             K          N    + W+ I   Y+ S + PS         +   +    +   ++
Sbjct: 237 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGND---FYIGYN 293

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
           +  I +  GK IT  + L+AG K    +    +          +D+G  + I+K +F ++
Sbjct: 294 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAIL 348

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
                ++GN+G +I++ T+ +K+  F L+ K Y+S A M+ I PK+  L++K        
Sbjct: 349 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 407

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           + + M+QLY+   +NP+AGC PIL+Q+P+F  +Y ++  S+E+RHAP+ GWI DL+A DP
Sbjct: 408 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDP 467

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I PI M ++MF+Q  ++P P D  QA ++  +P++FV  
Sbjct: 468 WF-------------------ILPIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 508

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +  FPAGL++YW+ +N+ S+  Q ++ K 
Sbjct: 509 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 537


>gi|295678214|ref|YP_003606738.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Burkholderia sp. CCGE1002]
 gi|295438057|gb|ADG17227.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Burkholderia sp. CCGE1002]
          Length = 552

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 145/575 (25%), Positives = 241/575 (41%), Gaps = 42/575 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M+        I     ++    WQ        F+      +         T       D 
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSTTPTQTAGTAAPGTTTPGTQPADL 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
                     A A   S  V+       G I+ +G     L+L         +  +V  L
Sbjct: 61  PATNAAAPGNAPAAEQSQLVKFGTDVYTGEIDTRGGTLSRLSLIKQGDGKQPD--LVITL 118

Query: 112 SPSNTKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
                 + Y A    +     N+ ++                         +     + +
Sbjct: 119 FDKTNSHTYLARTGLLGGDFPNHNDVFTLMPNQPTHLADGQNSFQMSFESPEKGGLRVIK 178

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKS 228
                   Y+  +   V N     +       ++R      T  F     G      +  
Sbjct: 179 TYTFTRGSYVIGVETKVQNVGTAPVTPQVYMELVRDDQPVETPRFSHTFIGPAVYTNEHH 238

Query: 229 LVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
             +  + D++K+        ++ W+ +   Y+AS +IP +       F       + Y+ 
Sbjct: 239 FQKMTFGDLDKNKQDFATSANDGWVAMVQHYFASAWIPQEG--VKRDFYAEKIDPSLYRV 296

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
                  TI PG++++ +  LFAG +E   +         P  +++ D+GW   IAKP+F
Sbjct: 297 GMKQAMPTIQPGQTVSVSARLFAGPEEEQMLAGIA-----PGLDLVKDYGWVTIIAKPLF 351

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+S  ++ VGN+G +I+L T+ +K +FFPL+   Y S A MK I P++  LRE+FK   
Sbjct: 352 WLLSKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG-D 410

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
           PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI+DL+ 
Sbjct: 411 PQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWIWWIQDLSQ 470

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527
            DP                     I P++M++SMF+Q K++P P D  QA ++ +MP+ F
Sbjct: 471 QDPYF-------------------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAF 511

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
                 FPAGL++Y+  +NV+SI QQ  I +M GA
Sbjct: 512 SVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGA 546


>gi|326571729|gb|EGE21742.1| putative inner membrane protein translocase component YidC
           [Moraxella catarrhalis BC8]
 gi|326574357|gb|EGE24300.1| putative inner membrane protein translocase component YidC
           [Moraxella catarrhalis CO72]
          Length = 547

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 126/569 (22%), Positives = 233/569 (40%), Gaps = 42/569 (7%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M++     + IA+   + +++ AW++ Y    +       +         QV     ++ 
Sbjct: 1   MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTHADVPTTQVVGDIPSLT 60

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
               A  L+ +  + +        IN  G       L+ ++    S  P V L       
Sbjct: 61  AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETDL 116

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174
             Y A+   +               +  S         +  + L +      + +     
Sbjct: 117 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 176

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230
              Y   +   + NNS    +     ++ R   +          G+        G  S  
Sbjct: 177 AGKYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 236

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
             K          N    + W+ I   Y+ S + PS         +        +   ++
Sbjct: 237 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGKD---FYIGYN 293

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
           +  I +  GK IT  + L+AG K    +    +          +D+G  + I+K +F ++
Sbjct: 294 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAIL 348

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
                ++GN+G +I++ T+ +K+  F L+ K Y+S A M+ I PK+  L++K        
Sbjct: 349 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 407

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           + + M+QLY+   +NP+AGC PIL+Q+P+F  +Y ++  S+E+RHAP+ GWI DL+A DP
Sbjct: 408 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDP 467

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I PI M ++MF+Q  ++P P D  QA ++  +P++FV  
Sbjct: 468 WF-------------------ILPIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 508

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +  FPAGL++YW+ +N+ S+  Q ++ K 
Sbjct: 509 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 537


>gi|85060407|ref|YP_456109.1| putative inner membrane protein translocase component YidC [Sodalis
           glossinidius str. 'morsitans']
 gi|84780927|dbj|BAE75704.1| putative preprotein translocase subunit [Sodalis glossinidius str.
           'morsitans']
          Length = 547

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 130/572 (22%), Positives = 238/572 (41%), Gaps = 54/572 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +             +        +             
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAWQTDHAPTPTAQTTQQTANTTAADPNSQGVP------ 53

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L   IN +G   +   L  Y   + S  P   L   ++ +  Y
Sbjct: 54  ---ASGQGQLITVKTDVLSLKINTRGGDIEQAFLLSYPDKLGSPQPFHLL--ETSPEFVY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N        +              + L +   + +++ +   L 
Sbjct: 109 QAQSGLTGKNGPDNPANGERPLFTTNQDTYVLADNQSELRVPLTYTTPDGVVYTKAFILK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227
              +   +   + N S   +  +  G++ +           ++        G      D 
Sbjct: 169 RGDFALNVNYDINNASAQPLELTLFGQLKQSIDLPKARNTDSSNFALHTYRGAAYSTTDD 228

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              +  + DI+  ++S       W+ +  +Y+A+ ++P   T   + F     G+     
Sbjct: 229 KYQKYSFKDIKGENLS-VSTEGGWVAMLQQYFATAWVPF--TPGKNTFYTSDLGNGLAAV 285

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            F +  +T+  G        L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 286 GFKSAPVTVAAGGQSELKATLWLGPEIQDKMAAIA-----PHLDLAVDYGWLWFISQPLF 340

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+     
Sbjct: 341 KLLKFIHSYIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERLGDDK 400

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF  WI DL+A
Sbjct: 401 -QRQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSIELRHAPFALWIHDLSA 459

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526
            DP                     I P++M ++MF   KMSP    D  Q  I+ +MPV+
Sbjct: 460 QDPYY-------------------ILPLLMGITMFFIQKMSPTTVTDLMQQKIMTFMPVI 500

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 501 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 532


>gi|326573504|gb|EGE23470.1| putative inner membrane protein translocase component YidC
           [Moraxella catarrhalis O35E]
          Length = 547

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 126/569 (22%), Positives = 234/569 (41%), Gaps = 42/569 (7%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M++     + IA+   + +++ AW++ Y    +       +  +      QV     ++ 
Sbjct: 1   MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTRADVPTTQVVGDIPSLT 60

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
               A  L+ +  + +        IN  G       L+ ++    S  P V L       
Sbjct: 61  AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETDL 116

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174
             Y A+   +               +  S         +  + L +      + +     
Sbjct: 117 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 176

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230
              Y   +   + NNS    +     ++ R   +          G+        G  S  
Sbjct: 177 AGQYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 236

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
             K          N    + W+ I   Y+ S + PS         +        +   ++
Sbjct: 237 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGKD---FYIGYN 293

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
           +  I +  GK IT  + L+AG K    +    +          +D+G  + I+K +F ++
Sbjct: 294 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAIL 348

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
                ++GN+G +I++ T+ +K+  F L+ K Y+S A M+ I PK+  L++K        
Sbjct: 349 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 407

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           + + M+QLY+   +NP+AGC PIL+Q+P+F  +Y ++  S+E+RHAP+ GWI DL+A DP
Sbjct: 408 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDP 467

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I PI M ++MF+Q  ++P P D  QA ++  +P++FV  
Sbjct: 468 WF-------------------ILPIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 508

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +  FPAGL++YW+ +N+ S+  Q ++ K 
Sbjct: 509 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 537


>gi|326561739|gb|EGE12074.1| putative inner membrane protein translocase component YidC
           [Moraxella catarrhalis 7169]
 gi|326569040|gb|EGE19109.1| putative inner membrane protein translocase component YidC
           [Moraxella catarrhalis BC1]
          Length = 547

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 126/569 (22%), Positives = 233/569 (40%), Gaps = 42/569 (7%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M++     + IA+   + +++ AW++ Y    +       +         QV     ++ 
Sbjct: 1   MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTHADVPTTQVVGDIPSLT 60

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
               A  L+ +  + +        IN  G       L+ ++    S  P V L       
Sbjct: 61  AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETDL 116

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174
             Y A+   +               +  S         +  + L +      + +     
Sbjct: 117 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 176

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230
              Y   +   + NNS    +     ++ R   +          G+        G  S  
Sbjct: 177 AGKYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 236

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
             K          N    + W+ I   Y+ S + PS         +        +   ++
Sbjct: 237 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGKD---FYIGYN 293

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
           +  I +  GK IT  + L+AG K    +    +          +D+G  + I+K +F ++
Sbjct: 294 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAIL 348

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
                ++GN+G +I++ T+ +K+  F L+ K Y+S A M+ I PK+  L++K        
Sbjct: 349 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 407

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           + + M+QLY+   +NP+AGC PIL+Q+P+F  +Y ++  S+E+RHAP+ GWI DL+A DP
Sbjct: 408 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWIADLSAMDP 467

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I PI M ++MF+Q  ++P P D  QA ++  +P++FV  
Sbjct: 468 WF-------------------ILPIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 508

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +  FPAGL++YW+ +N+ S+  Q ++ K 
Sbjct: 509 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 537


>gi|209519687|ref|ZP_03268476.1| 60 kDa inner membrane insertion protein [Burkholderia sp. H160]
 gi|209499904|gb|EDZ99970.1| 60 kDa inner membrane insertion protein [Burkholderia sp. H160]
          Length = 552

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 146/574 (25%), Positives = 244/574 (42%), Gaps = 42/574 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M+        I     ++    WQ        F+      +         T       D 
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPNTTPTQTAGSAAPGTTTPGTQPADL 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
              +      A A + S  V+       G I+ +G     L+L         +  +V  L
Sbjct: 61  PATSAAAPGNAPAAAQSQLVKFSTDVYSGEIDTRGGTVSRLSLVKQGDGKQPD--LVITL 118

Query: 112 SPSNTKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
                 + Y A    +     N+ ++                         +     + +
Sbjct: 119 FDRTNNHTYLARTGLLGGDFPNHNDVFTLMPNQPTQLVDGQNSFQMSFESPEKGGLKVIK 178

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKS 228
                   Y+  +   V N     +       ++R      T  F     G      +  
Sbjct: 179 TYTFTRGSYVIGVETKVQNVGTTAVTPQVYMELVRDDQPVETPRFSHTFIGPAVYTNEHH 238

Query: 229 LVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
             +  +SD++K+        ++ W+ +   Y+AS +IP +      +F       + Y+ 
Sbjct: 239 FQKMTFSDLDKNKQDFATSANDGWVAMVQHYFASAWIPQEG--VKREFYAEKIDPSLYRV 296

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
                  TI PG++++ +  LFAG +E   +         P  +++ D+GW   IAKP+F
Sbjct: 297 GMKQALPTIQPGQTVSVSARLFAGPEEEKMLAGIA-----PGLDLVKDYGWVTIIAKPLF 351

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+S  + LVGN+G +I+L T+ +K +FFPL+   Y S A MK I P++  LRE+FK   
Sbjct: 352 WLLSKIHGLVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG-D 410

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
           PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI+DL+ 
Sbjct: 411 PQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIQDLSQ 470

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527
            DP                     I PI+M++SMF+Q +++P P D  QA ++ +MP+ F
Sbjct: 471 QDPYF-------------------ILPILMAVSMFLQTRLNPTPPDPVQAKMMMFMPIAF 511

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
                 FPAGL++Y+  +NV+SI QQ  I +M G
Sbjct: 512 SVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545


>gi|170694073|ref|ZP_02885229.1| 60 kDa inner membrane insertion protein [Burkholderia graminis
           C4D1M]
 gi|170141145|gb|EDT09317.1| 60 kDa inner membrane insertion protein [Burkholderia graminis
           C4D1M]
          Length = 552

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 147/575 (25%), Positives = 239/575 (41%), Gaps = 44/575 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M+        I     ++    WQ        F+      +         T       D 
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTAGSAAPGTTTPGTQPADL 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
                       A + S  V+       G I+ +G     L+L         +  +V  L
Sbjct: 61  PATNAAAPANTPAATQSQLVKFSTDVYSGEIDTRGGTLSKLSLVKQGDGKQPD--LVITL 118

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILF 168
                 + Y A    +   +     +  T+      ++        L F+        + 
Sbjct: 119 FDRAGNHTYLARTGLLG-GDFPNHNDIYTLMPNQQTELKGDQKSFSLSFESPVKGGLKVI 177

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDK 227
           +        Y+  +   + N     +  S    ++R      T  F     G        
Sbjct: 178 KTYTFTRGSYVIGVDTKIQNVGTAPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYTEQN 237

Query: 228 SLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
              +  + DI+K+      +  N W+ +   Y+AS +IP +               A Y+
Sbjct: 238 HFQKMTFGDIDKNKEDYAKQADNGWIAMVQHYFASAWIPQQG--VKRDIYVEKIDPALYR 295

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
                    I PG+++  +  LFAG +E   +         P  E++ D+GW   IAKP+
Sbjct: 296 VGVKQPVAAIAPGQTVDVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPL 350

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+   ++ VGN+G AI+L T+ +K +FFPL+   Y S A MK I P++  LRE+FK  
Sbjct: 351 FWLLEKIHSYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG- 409

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+
Sbjct: 410 DPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWVLWIHDLS 469

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
             DP                     I P++M++SMF+Q K++P P D  QA ++ +MP+ 
Sbjct: 470 QQDPYF-------------------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIA 510

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           F      FPAGL++Y+  +NV+SI QQ  I +M G
Sbjct: 511 FSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545


>gi|37678187|ref|NP_932796.1| putative inner membrane protein translocase component YidC [Vibrio
           vulnificus YJ016]
 gi|61214266|sp|Q7MQK5|OXAA_VIBVY RecName: Full=Inner membrane protein oxaA
 gi|37196926|dbj|BAC92767.1| inner membrane protein, 60 kDa [Vibrio vulnificus YJ016]
          Length = 539

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 131/549 (23%), Positives = 230/549 (41%), Gaps = 42/549 (7%)

Query: 22  QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGS 81
           Q + V         E+    +        +              + +  + +    L  S
Sbjct: 21  QQWQVAKNPAPQAVEQAQTSSTLPAPSFADELDPAPAQQ-----ASAKLITVTTDVLTLS 75

Query: 82  INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV 141
           I+  G      +L  Y  +++S +    L       + + A+   V         N+   
Sbjct: 76  IDTVGGDVVAADLNQYSAELNSANAFELLRDTQG--HQFIAQSGLVGPQGIDLSSNNRPS 133

Query: 142 WNLISGKILTPTTPIKLV----FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFS 197
           + + +          +L     ++       +  I     Y   +   V N S +     
Sbjct: 134 YQVSADSFTLADDQNELRIPMTYQANGLEYTKTFILKRGSYAIDVEFDVINKSGNNATLG 193

Query: 198 PRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGIS 255
               + ++      + T     G      D    +  + D++  ++S        W  + 
Sbjct: 194 MYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYSFEDMQDRNLSLTLTNGQGWAAMI 253

Query: 256 DKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315
             Y+A+ +IP  E   +   + + +              T+  G S   T  L+AG K  
Sbjct: 254 QHYFAAAWIPRNEPGANLYTRVIGNMGD---IGVRMPNKTVADGDSAHFTATLWAGPKLQ 310

Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375
             +         P  ++++D+GW +FIAKP+  L+S   + VGN+G+AI+  T  V+   
Sbjct: 311 DQMAEVA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQSFVGNWGVAIICLTFIVRGAM 365

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435
           +PL K QY S A M+ +QPK+  +RE+      Q + + M++LYK   +NPL GC P++L
Sbjct: 366 YPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPLIL 424

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           Q+P+F A+Y  +  S+E+RH+PF  WI DL+A DP                     I P+
Sbjct: 425 QMPIFIALYWALMESVELRHSPFILWIHDLSAQDPYF-------------------ILPL 465

Query: 496 IMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           +M  SMF+  KMSP    D  Q  I+ +MPV+F F    FP+GL++YW  SN+++++QQ+
Sbjct: 466 LMGGSMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQS 525

Query: 555 VIMKMHGAE 563
           +I K    +
Sbjct: 526 LIYKALEKK 534


>gi|78357437|ref|YP_388886.1| protein translocase subunit yidC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|123552065|sp|Q30YQ5|OXAA_DESDG RecName: Full=Inner membrane protein oxaA
 gi|78219842|gb|ABB39191.1| protein translocase subunit yidC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 536

 Score =  325 bits (832), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 136/571 (23%), Positives = 241/571 (42%), Gaps = 49/571 (8%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYV----YPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
             N    +A+ LS+ ++  W          P    +      +Q             A  
Sbjct: 1   MENKRPIIAVVLSLFVLIGWSYLSEFMGWTPAPAPVEQNATAVQQKASEPVAQPVQTASA 60

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
               + A +    V++  P        +G       L+ Y   +   +P+V L++P    
Sbjct: 61  PAASSFAPTEGREVKVDTPLYTAVFQSQGGVLKHFRLKKYTESIEEGAPLVELVTPEAAG 120

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
            A    L             +   +     K+        +     + + FERT+S D  
Sbjct: 121 KAPMGLLL----NGQPTWKLAAWQFEGDDLKLDGSGKGELVFVGEMDGVRFERTLSFDPE 176

Query: 178 YL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
                    +T+ +           +           + +              ++  +D
Sbjct: 177 TYLISEKVRLTDTAGVSRDVRLGMTLSTTSLSPEGGAYNLTRMA---WYQDGFHQETSAD 233

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
             + +     E  +W G+   Y+ +V  P++       FK + +G          + ++I
Sbjct: 234 DLRETGVKVDEGVNWGGVMCNYFMAVMAPAEGA---LPFKGVLEGGVYRSV-VENSSLSI 289

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
             G S       + G KE   +            +  +++GWF F+AKP+   + +FY+ 
Sbjct: 290 ASGSSAEFGIGYYIGPKESDRLAAMPY-----HLDEALNYGWFTFLAKPLVSGLKFFYSY 344

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
            GN+G+AI++ T+ VKLLF+PL++K Y S   MK +QP + +++EK+     Q + + ++
Sbjct: 345 AGNYGVAIIILTILVKLLFWPLSQKSYKSMEQMKKLQPMVQKIKEKYGD-DRQRMNQEVM 403

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIKDLAAA 468
           +LYKT+ +NP  GC P+LLQIPVF  +Y+ +  ++E+RHAPF          W+ DL+A 
Sbjct: 404 ELYKTYKVNPAGGCLPMLLQIPVFLGLYQGLLNAIELRHAPFIAHLPFTDIVWLADLSAK 463

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP                     I P++M  +M +Q +++P PAD  QA I+ +MPVVF 
Sbjct: 464 DPFY-------------------ITPVVMGATMLLQQRLTPAPADPTQAKIMMFMPVVFT 504

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           F   +FPAGL++YW  +NV+SI QQ  +++ 
Sbjct: 505 FMFLNFPAGLVVYWLVNNVLSIGQQWWMLRK 535


>gi|256823857|ref|YP_003147820.1| 60 kDa inner membrane insertion protein [Kangiella koreensis DSM
           16069]
 gi|256797396|gb|ACV28052.1| 60 kDa inner membrane insertion protein [Kangiella koreensis DSM
           16069]
          Length = 536

 Score =  325 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 140/569 (24%), Positives = 243/569 (42%), Gaps = 53/569 (9%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           ME    +F+      + ++  AWQ  Y     ++  NE+   +     ++          
Sbjct: 1   MESMRGFFILGFAICTFLLYQAWQKDYGPQSQQQEVNEQFGQKDAVVDSE---------- 50

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT-K 117
                 +  S  +E+        I+  G       L  Y+ ++ S    V L    +   
Sbjct: 51  ------IKSSNLIEVVTDVFKVKIDRVGGDVVYAELNDYNRELDSEKEKVVLFDYRDRLY 104

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-E 176
            A  A L   +  N +         N            I L + N + + F +T     +
Sbjct: 105 QAKSALLGNGAPDNQLPRATYQVKQNAYQLADGKNELEIPLTWVNEDGVEFTKTFKFKRD 164

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            Y   +   V N S +   ++    ++R +  T             +    S  E+KY  
Sbjct: 165 DYEIGVEYKVKNQSSNDRTYNFVAELIRDQKPTGLEEKSSFGMSPFIGVAYSPEERKYEK 224

Query: 237 IEKSSI----SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
           +    +     N      W+G    Y+ S +IP ++          S+       +F   
Sbjct: 225 MSVEDLVEEPINVTRQGGWIGYLQHYFISAWIPEQQEQIKVTTTVKSNQDTV--IRFIQP 282

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
            +++           L+ G K    +     + A P  E  +D  W ++I  P++ LM +
Sbjct: 283 TVSVPAQSESVINATLYVGPKILKRL-----EAAAPGLEKSLDLSWVWWIGLPLYKLMQF 337

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
           F++ VGN+G+AI+L T+ VK L +PL+  QY S ANM+ + PK+ +L+E++     Q +Q
Sbjct: 338 FFSFVGNWGLAIILVTLVVKALLYPLSAAQYRSMANMRKLAPKMQQLKERY-GEDKQRMQ 396

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           + M+++YK    NP  GC P++LQ P+F A+Y V+  ++E+RHAPF  WI+DL+ ADP  
Sbjct: 397 QEMMKMYKDEGANPFGGCLPMILQFPIFIALYYVLFEAVELRHAPFVAWIQDLSVADPYF 456

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFA 530
                              + P++M  SM++  K+ P  P  D  Q  I++++P+VF   
Sbjct: 457 -------------------VLPLLMGGSMWLMQKLQPQSPTMDPMQQKIMSYLPIVFTVF 497

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +  FPAGL++YW  +N+IS+ QQ  I K 
Sbjct: 498 MLFFPAGLVLYWLCNNLISVAQQQYITKK 526


>gi|322515695|ref|ZP_08068668.1| YidC/Oxa1 family membrane protein insertase [Actinobacillus ureae
           ATCC 25976]
 gi|322118240|gb|EFX90532.1| YidC/Oxa1 family membrane protein insertase [Actinobacillus ureae
           ATCC 25976]
          Length = 542

 Score =  325 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 134/547 (24%), Positives = 246/547 (44%), Gaps = 32/547 (5%)

Query: 18  VYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPS 77
              WQ  +      +   +++     +  +    S A  +I   A+  +    + +++  
Sbjct: 20  FTQWQQDFNPEIQAQKQAQQQAQVASQSSDVPAASNANTVI---AENATQGKTITIQSDV 76

Query: 78  LIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPN 137
           L  +I+  G      +L  ++ +++S +P   L + + T  A    +       N   P 
Sbjct: 77  LRLTIDTLGGDVIASDLLAHNAELNSETPFKLLQTGATTYVAQSGLVGKNGIDTNTGRPQ 136

Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFS 197
                             + + F+    +  +  +     Y   +   V N S   I   
Sbjct: 137 YQVAQEAFVLADGQNKISVPMTFEKDGVLYTKTFVLKRGSYDVAVNFNVKNQSAQAIEVQ 196

Query: 198 PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257
           P G++     +++ +         A    ++  ++   D       N      W+ +   
Sbjct: 197 PYGQLKHTLVESSGSLTMPTYTGGAYSSSETNYKKYSFDEMAKENLNIGTKAGWVAVLQH 256

Query: 258 YWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317
           Y+ S ++P+++       +  +         +      + P    T T+ L+ G K+   
Sbjct: 257 YFVSAWVPNQDAQNSLYSRTNNG---IATIGYRGPVTEVAPNSEATITSQLWTGPKDQKE 313

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           +            ++ +D+GW +FIAKP+F L+++  ++V N+G+AI+  T+ VK++ +P
Sbjct: 314 MEATAAT-----LDLTVDYGWAWFIAKPLFALLTFIQSIVTNWGLAIIGVTLVVKMILYP 368

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437
           L K QY S A M+ +QPKI E+RE+F     Q + + M++LYK   +NP+ GC PIL+Q+
Sbjct: 369 LTKAQYTSMAKMRMLQPKIQEMRERFGD-DRQRMSQEMMKLYKDEKVNPMGGCLPILIQM 427

Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
           P+F A+Y     ++E+RHAPF+GWI+DL+A DP                     I P++M
Sbjct: 428 PIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY-------------------ILPLLM 468

Query: 498 SLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             SMF+  KMSP P AD  Q  ++ +MPV+F      FP+GL++YW  SN+I+I QQ +I
Sbjct: 469 GGSMFLLQKMSPTPVADPVQKKVMTFMPVLFTVFFLWFPSGLVLYWLTSNLITIAQQWLI 528

Query: 557 MKMHGAE 563
            +    +
Sbjct: 529 YRNLEKK 535


>gi|307825357|ref|ZP_07655576.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Methylobacter tundripaludum SV96]
 gi|307733532|gb|EFO04390.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Methylobacter tundripaludum SV96]
          Length = 585

 Score =  325 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 151/592 (25%), Positives = 253/592 (42%), Gaps = 63/592 (10%)

Query: 2   ERNWNYFVAIALSVIIVY---AWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
             N  + + +  ++++     AWQ  Y          E     T +       + A    
Sbjct: 16  MDNIRFILIVTFAMLVFMLQQAWQLDYGPKPEVAAITEPVATNTKEDLPSATGASAQTET 75

Query: 59  DDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV----------- 101
            +   A       S +  + +K   L   I+LKG    +L+L  Y ++            
Sbjct: 76  AEPNTAAVPLATMSSANIITVKTDVLALQIDLKGGTIQNLDLLTYPIEKSNTVVDKLRAM 135

Query: 102 ------SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----T 151
                   N+  V L + S  +  + A+   ++ +     P+ +TV+             
Sbjct: 136 IGLSVAEKNTAPVRLFNSSQ-EKLFVAQSGLIADSGFATAPSHHTVFKNEQTNYDLQPGQ 194

Query: 152 PTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210
            +  + L + + N +   +  +     Y   +   V N+S          ++++    T+
Sbjct: 195 DSLTVPLTWTDNNGLTITKLFTFKRGSYDITLEQKVKNDSAKPWSGRQYSQLLKAPDTTS 254

Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYS----DIEKSSISNFHESNSWLGISDKYWASVFIPS 266
                         G     ++KY     D       +      W  +   Y+AS +IP 
Sbjct: 255 KGGMLTGGMRAYDGGVIYTEKEKYQKISFDDMSDENLDVATKGGWTALIQHYFASAWIPP 314

Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326
            +   H   K L+DGH  Y     +  +T+           LFAG K  P +        
Sbjct: 315 ADQENHFYTKVLNDGH--YVIGTYSAPVTVNANSDAQFVAQLFAGPKIQPMMEKIA---- 368

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            P  E+ +D+ +  FI KP++ L++  ++  GN+G+AI+  T+ +KLLFFPL++  Y S 
Sbjct: 369 -PGLELTVDYSFLTFIGKPIYWLLNQIHDAAGNWGVAIIGVTLCIKLLFFPLSQSSYKSM 427

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
           A M+ IQP++ EL+E+F    P      M+ LYK   +NPL GC PIL+QIPVF  +Y V
Sbjct: 428 AKMRKIQPRLKELQERFADDRP-RFNTEMMALYKKEKVNPLGGCLPILVQIPVFMCLYWV 486

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
           +S ++E RHAPF  WI+DL++ DP                     + P+IM ++M IQ  
Sbjct: 487 LSETVEFRHAPFILWIQDLSSQDPFY-------------------VLPVIMGITMKIQQS 527

Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           ++P P D  QA ++   P+VF      FPAGL++YW  +N +SI+QQ+ I K
Sbjct: 528 LNPAPIDPIQAKVMKMFPIVFTIFFLFFPAGLVLYWVVNNTLSIIQQSYITK 579


>gi|27364440|ref|NP_759968.1| membrane protein insertase [Vibrio vulnificus CMCP6]
 gi|38503001|sp|Q8DDI2|OXAA_VIBVU RecName: Full=Inner membrane protein oxaA
 gi|27360559|gb|AAO09495.1| OxaI/YidC membrane insertion protein [Vibrio vulnificus CMCP6]
          Length = 539

 Score =  325 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 132/549 (24%), Positives = 230/549 (41%), Gaps = 42/549 (7%)

Query: 22  QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGS 81
           Q + V         E+    +        +              + +  + +    L  S
Sbjct: 21  QQWQVAKNPAPQAVEQAQTSSTLPAPSFADELDPAPAQQ-----ASAKLITVTTDVLTLS 75

Query: 82  INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV 141
           I+  G      +L  Y  +++S +    L       + + A+   V         N+   
Sbjct: 76  IDTVGGDVVAADLNQYSAELNSANAFELLRDTQG--HQFIAQSGLVGPQGIDLSSNNRPS 133

Query: 142 WNLISGKILTPTTPIKLV----FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFS 197
           + + +          +L     ++       +  I     Y   +   V N S +     
Sbjct: 134 YQVSADSFTLADDQNELRIPMTYQANGLEYTKTFILKRGSYAIDVEFDVINKSGNNATLG 193

Query: 198 PRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGIS 255
               + ++      + T     G      D    +  + D++  ++S        W  + 
Sbjct: 194 MYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYSFEDMQDRNLSLTLTNGQGWAAMI 253

Query: 256 DKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315
             Y+A+ +IP  E   +   + + +              TI  G S   T  L+AG K  
Sbjct: 254 QHYFAAAWIPRNEPGANLYTRVIGNMGD---IGVRMPNKTIADGDSAHFTATLWAGPKLQ 310

Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375
             +         P  ++++D+GW +FIAKP+  L+S   + VGN+G+AI+  T  V+   
Sbjct: 311 DQMAEVA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQSFVGNWGVAIICLTFIVRGAM 365

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435
           +PL K QY S A M+ +QPK+  +RE+      Q + + M++LYK   +NPL GC P++L
Sbjct: 366 YPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPLIL 424

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           Q+P+F A+Y  +  S+E+RH+PF  WI DL+A DP                     I P+
Sbjct: 425 QMPIFIALYWALMESVELRHSPFILWIHDLSAQDPYF-------------------ILPL 465

Query: 496 IMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           +M  SMF+  KMSP    D  Q  I+ +MPV+F F    FP+GL++YW  SN+++++QQ+
Sbjct: 466 LMGGSMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQS 525

Query: 555 VIMKMHGAE 563
           +I K    +
Sbjct: 526 LIYKALEKK 534


>gi|225025482|ref|ZP_03714674.1| hypothetical protein EIKCOROL_02382 [Eikenella corrodens ATCC
           23834]
 gi|224941766|gb|EEG22975.1| hypothetical protein EIKCOROL_02382 [Eikenella corrodens ATCC
           23834]
          Length = 543

 Score =  325 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 142/578 (24%), Positives = 255/578 (44%), Gaps = 61/578 (10%)

Query: 1   MERN---WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME N       V   ++++ +  W  F   P+  E    +   Q        D       
Sbjct: 1   MESNNELKRTAVFAIIAILTLMVWNYFNPQPQQPEQAAVQTEQQAAAPVAGSD------- 53

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
                  L  +  + +   +L   I+        L+L  ++    + S   TLLS +N +
Sbjct: 54  -------LPPTKPITVSTDTLKAVIDENSGDLRGLDLLKHNSAGDA-SKTFTLLSDNN-E 104

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DE 176
           + Y  +   +    N  L +S+      S  +   T  ++L     N +  ++  +    
Sbjct: 105 HKYLVQSLLIDQKGNYLLQDSSFKAPQNSYTLNGDTLEVRLSAPETNGVQVDKVYTFRKG 164

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKY 234
            YL  +   + N++   ++     R++R       + +  Q     +A   D +  +  +
Sbjct: 165 SYLIDVRFDIANHTDAPLKLDGVYRVLRDSSTPEGSGYFNQTYVGPVAYTPDGNFQKVPF 224

Query: 235 SDIEKSSISNFHE-------SNSWLGISDKYWASVFIPSKE------TSFHSQFKYLSDG 281
            D++    S           ++ W+G +  Y+ +V++   +       + +         
Sbjct: 225 KDLDDDFESKRDRADYQRTATSGWVGFTQHYFTTVWVLQPKDGNSICQNGNCLLDIKRRS 284

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
              Y A        I  G+ ++    L+AG +E+  I          R E++ D+G  + 
Sbjct: 285 DNLYSAGVRVPLPAIAAGQKLSVPAELYAGPQEYAVISKVAD-----RLELVKDYGRTHV 339

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           +A P+F L+++ ++L+GN+G +I+L T+ VK L  PL    Y S A M+ + PK++ L+ 
Sbjct: 340 VAAPLFGLLNWLHSLIGNWGWSIVLLTIIVKTLLLPLTNASYRSMAKMRAVAPKLEMLK- 398

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           K        LQ+AM+++YK   INPL GC P+LLQ PVF  +Y V+  S+E+R A + GW
Sbjct: 399 KQHGDDRMALQQAMMKMYKDEKINPLGGCLPMLLQFPVFIGLYWVLLASVELRQASW-GW 457

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
           + DLA  DP                     I PI+M+L+M+IQ K+SPPP+D  QA ++ 
Sbjct: 458 VADLARPDPLY-------------------ILPILMALTMYIQTKLSPPPSDPMQAKMMK 498

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            MP+ F      FPAGL++Y+  +N++S+ QQ +I + 
Sbjct: 499 IMPLAFSVMFFFFPAGLVLYYVVNNLLSMGQQWLINRK 536


>gi|260553776|ref|ZP_05826046.1| preprotein translocase subunit YidC [Acinetobacter sp. RUH2624]
 gi|260405080|gb|EEW98580.1| preprotein translocase subunit YidC [Acinetobacter sp. RUH2624]
          Length = 586

 Score =  325 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 136/588 (23%), Positives = 242/588 (41%), Gaps = 67/588 (11%)

Query: 11  IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
              + +++ AWQ  Y                 E++ +  N +T    + V  +  A    
Sbjct: 14  FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEISADLPNAKTATVASDVPQANIAQSQT 73

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A A      + ++       IN KG     + L  +     SN P V L + +     
Sbjct: 74  TDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPFVMLENDAK--RT 131

Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164
           Y A+   +             ++                   G+     +   +      
Sbjct: 132 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQKGQSEKVLSVPMVFKTPEG 191

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220
             + +        Y   +   V N S    +    G++ R   +     +   F +    
Sbjct: 192 VEIIKTFTFTQGQYPIVVSHQVINRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 251

Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271
               G       + K+++  +  ++       W+ I   Y+ S +IP       +    +
Sbjct: 252 GGAWGTPDSHYNKLKFANFSEEKLNA-DAKGGWVAIVQHYFVSAWIPGNLKLTQANGQPY 310

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            ++ +            F++  I +  G S+     L++G K    +             
Sbjct: 311 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 365

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ 
Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 425

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           I P++  ++E+F         + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+
Sbjct: 426 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+RHAP+ GWI+DL+A DP                     I P+IM  +MF Q  ++P P
Sbjct: 485 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 525

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           AD  QA +   MP++F   +  FPAGL++YW  +N I+I+QQ  I K 
Sbjct: 526 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINKS 573


>gi|326560696|gb|EGE11064.1| putative inner membrane protein translocase component YidC
           [Moraxella catarrhalis 46P47B1]
          Length = 557

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 126/569 (22%), Positives = 233/569 (40%), Gaps = 42/569 (7%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M++     + IA+   + +++ AW++ Y    +       +         QV     ++ 
Sbjct: 11  MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTHADVPTTQVVGDIPSLT 70

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
               A  L+ +  + +        IN  G       L+ ++    S  P V L       
Sbjct: 71  AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETDL 126

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174
             Y A+   +               +  S         +  + L +      + +     
Sbjct: 127 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 186

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230
              Y   +   + NNS    +     ++ R   +          G+        G  S  
Sbjct: 187 AGKYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 246

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
             K          N    + W+ I   Y+ S + PS         +        +   ++
Sbjct: 247 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGKD---FYIGYN 303

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
           +  I +  GK IT  + L+AG K    +    +          +D+G  + I+K +F ++
Sbjct: 304 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAIL 358

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
                ++GN+G +I++ T+ +K+  F L+ K Y+S A M+ I PK+  L++K        
Sbjct: 359 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 417

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           + + M+QLY+   +NP+AGC PIL+Q+P+F  +Y ++  S+E+RHAP+ GWI DL+A DP
Sbjct: 418 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDP 477

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I PI M ++MF+Q  ++P P D  QA ++  +P++FV  
Sbjct: 478 WF-------------------ILPIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 518

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +  FPAGL++YW+ +N+ S+  Q ++ K 
Sbjct: 519 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 547


>gi|59802471|ref|YP_209183.1| putative inner membrane protein translocase component YidC
           [Neisseria gonorrhoeae FA 1090]
 gi|240015755|ref|ZP_04722295.1| putative inner membrane protein translocase component YidC
           [Neisseria gonorrhoeae FA6140]
 gi|240112100|ref|ZP_04726590.1| putative inner membrane protein translocase component YidC
           [Neisseria gonorrhoeae MS11]
 gi|240114846|ref|ZP_04728908.1| putative inner membrane protein translocase component YidC
           [Neisseria gonorrhoeae PID18]
 gi|240124874|ref|ZP_04737760.1| putative inner membrane protein translocase component YidC
           [Neisseria gonorrhoeae SK-92-679]
 gi|254492908|ref|ZP_05106079.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae 1291]
 gi|268598157|ref|ZP_06132324.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae MS11]
 gi|268600501|ref|ZP_06134668.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID18]
 gi|268683454|ref|ZP_06150316.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae
           SK-92-679]
 gi|293397800|ref|ZP_06642006.1| inner membrane protein oxaA [Neisseria gonorrhoeae F62]
 gi|75507262|sp|Q5F4W6|OXAA_NEIG1 RecName: Full=Inner membrane protein oxaA
 gi|59719366|gb|AAW90771.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|226511948|gb|EEH61293.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae 1291]
 gi|268582288|gb|EEZ46964.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae MS11]
 gi|268584632|gb|EEZ49308.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID18]
 gi|268623738|gb|EEZ56138.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae
           SK-92-679]
 gi|291611746|gb|EFF40815.1| inner membrane protein oxaA [Neisseria gonorrhoeae F62]
          Length = 545

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 139/575 (24%), Positives = 237/575 (41%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q      +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQKQAATASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      N P V  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFV--LFGDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +   T  ++L     N +  ++  +   + YL
Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKDSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   + N S      S   RI+R   +     +        +    + +  +  +SD+
Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +           +          
Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRSDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A  S     I  G    T   L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|300313620|ref|YP_003777712.1| inner-membrane transmembrane protein [Herbaspirillum seropedicae
           SmR1]
 gi|300076405|gb|ADJ65804.1| inner-membrane transmembrane protein [Herbaspirillum seropedicae
           SmR1]
          Length = 542

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 161/549 (29%), Positives = 251/549 (45%), Gaps = 34/549 (6%)

Query: 22  QNFYVYPRIEEMNNERKNI------QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75
             F+      +                   P     +  AV   D A   +    + +  
Sbjct: 8   SMFFPSANPTQEQAAANPAAPTASPTGSPVPQAGTPAPGAVPGADVAATATKGETIVITT 67

Query: 76  PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135
             +  SI+  G +   L L      V     +V  L  S   + Y AE   +        
Sbjct: 68  DLVKASIDTVGGELKRLELLKQPDVVDPTKNVV--LFDSEPGHMYLAESGLI----GGPF 121

Query: 136 PNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSID 192
           PN  T++   +G             LV       L +      + YL  +  TVTN +  
Sbjct: 122 PNHKTIFTAQAGPRTLDNGNEIQLVLVADQGGVKLTKTYTFKRDSYLIDVKHTVTNTTGA 181

Query: 193 QIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SN 249
            I  S   +++R    P   ++ +    G       +   +  +  I      + ++  N
Sbjct: 182 AINPSLYLQLVRDGNKPGGESHFYSTFTGPAVYSNSEHFEKLDFEKIANGKQQHVNKTDN 241

Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309
            W+ +   Y+ S FIP +        K +  G   Y         T+ P  S+T  + L+
Sbjct: 242 GWIAMVQHYFVSAFIPPQNAQRDVFSKKV--GDNLYAVGSILPLGTVAPNASVTMDSQLY 299

Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369
           +G     T+         P  +++ D+G    IA+P+F LM++ +N+VGN+G  I+L TV
Sbjct: 300 SGPTVSKTLQAIA-----PGLDLVRDYGHLTVIAEPIFWLMTHIHNIVGNWGWTIILLTV 354

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429
            +KL+FFPL+   Y S A MK + PK+  +RE+ K   PQ + + M+ LYKT  INPL G
Sbjct: 355 LIKLIFFPLSAASYRSMAKMKAVSPKMQAIRERHKG-DPQAMNREMMTLYKTEKINPLGG 413

Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489
           C PI +QIPVF A+Y V+  S+EMR AP+ GW+ DL A D      LFG +P++    M 
Sbjct: 414 CLPIAIQIPVFIALYSVLLASVEMRGAPWLGWVHDLTAPD-----RLFGTIPYFN---MP 465

Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
           +G+ PIIM+ SMF+Q K++P P D  QA ++ +MP+VF F    FP+GL++YW  +N++S
Sbjct: 466 IGLLPIIMAASMFLQTKLNPTPPDPVQAKVMMFMPLVFSFMFFFFPSGLVLYWVTNNILS 525

Query: 550 IVQQAVIMK 558
           I QQ VI +
Sbjct: 526 IAQQWVITR 534


>gi|326575524|gb|EGE25449.1| putative inner membrane protein translocase component YidC
           [Moraxella catarrhalis 101P30B1]
          Length = 547

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 127/569 (22%), Positives = 233/569 (40%), Gaps = 42/569 (7%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M++     + IA+   + +++ AW++ Y    +       +         QV     ++ 
Sbjct: 1   MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTHADVPTTQVVGDIPSLT 60

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
               A  L+ +  + +        IN  G       L+ ++    S  P V L       
Sbjct: 61  AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETNS 116

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174
             Y A+   +               +  S         +  + L +      + +     
Sbjct: 117 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 176

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230
              Y   +   + NNS    +     ++ R   +          G+        G  S  
Sbjct: 177 AGQYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 236

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
             K          N    + W+ I   Y+ S + PS         +        +   ++
Sbjct: 237 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGKD---FYIGYN 293

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
           +  I +  GK IT  + L+AG K    +    +          +D+G  + I+K +F ++
Sbjct: 294 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAVL 348

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
                ++GN+G +I++ T+ +K+  F L+ K Y+S A M+ I PK+  L++K        
Sbjct: 349 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 407

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           + + M+QLY+   +NP+AGC PIL+Q+P+F  +Y V+  S+E+RHAP+ GWI DL+A DP
Sbjct: 408 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWVLVESVELRHAPWIGWITDLSAMDP 467

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I PI M ++MF+Q  ++P P D  QA ++  +P++FV  
Sbjct: 468 WF-------------------ILPIFMGMTMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 508

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +  FPAGL++YW+ +N+ S+  Q ++ K 
Sbjct: 509 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 537


>gi|296114113|ref|YP_003628051.1| protein translocase insertase subunit YidC [Moraxella catarrhalis
           RH4]
 gi|295921807|gb|ADG62158.1| protein translocase insertase subunit YidC [Moraxella catarrhalis
           RH4]
          Length = 556

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 126/569 (22%), Positives = 234/569 (41%), Gaps = 42/569 (7%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M++     + IA+   + +++ AW++ Y    +       +         QV     ++ 
Sbjct: 10  MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTHADVPTTQVVGDIPSLT 69

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
               A  L+ +  + +        IN  G       L+ ++    S  P V L       
Sbjct: 70  AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETNS 125

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174
             Y A+   +               +  S         +  + L +      + +     
Sbjct: 126 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 185

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230
              Y   +   + NNS    +     ++ R   +          G+        G  S  
Sbjct: 186 AGQYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 245

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
             K          N    + W+ I   Y+ S + PS         +   +    +   ++
Sbjct: 246 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGND---FYIGYN 302

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
           +  I +  GK IT  + L+AG K    +    +          +D+G  + I+K +F ++
Sbjct: 303 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAIL 357

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
                ++GN+G +I++ T+ +K+  F L+ K Y+S A M+ I PK+  L++K        
Sbjct: 358 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 416

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           + + M+QLY+   +NP+AGC PIL+Q+P+F  +Y ++  S+E+RHAP+ GWI DL+A DP
Sbjct: 417 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDP 476

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I PI M ++MF+Q  ++P P D  QA ++  +P++FV  
Sbjct: 477 WF-------------------ILPIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 517

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +  FPAGL++YW+ +N+ S+  Q ++ K 
Sbjct: 518 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 546


>gi|325123490|gb|ADY83013.1| putative inner membrane protein translocase component
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 574

 Score =  324 bits (830), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 134/588 (22%), Positives = 241/588 (40%), Gaps = 67/588 (11%)

Query: 11  IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
              + +++ AWQ  Y                 E++ +  N +     + V  +  A    
Sbjct: 2   FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKNATVASDVPQANIAQSQT 61

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A A      + ++       IN KG     + L  +     S+ P V L + +     
Sbjct: 62  TDATAPVNQQLISVQTDLYHIWINPKGGDIVRIELLSHDKSKDSDQPFVMLENDAK--RT 119

Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164
           Y A+   +             ++                   G+         +      
Sbjct: 120 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQKGQSEKVLNVPMVFKTPEG 179

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220
             + +        Y   +   V N S    +    G++ R   +     +   F +    
Sbjct: 180 VEIIKTFTFTQGQYPIVVKHQVINRSQQSWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 239

Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271
               G       + K+++  +  ++       W+ I   Y+ S +IP       +    +
Sbjct: 240 GGAWGTPDAHYNKLKFANFSEEKVN-TEAKGGWVAIVQHYFVSAWIPGNLKLTQANGQPY 298

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            ++ +            F++  I +  G S+     L++G K    +             
Sbjct: 299 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 353

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ 
Sbjct: 354 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 413

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           I P++  ++E+F         + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+
Sbjct: 414 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 472

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+RHAP+ GWI+DL+A DP                     I P+IM  +MF Q  ++P P
Sbjct: 473 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 513

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           AD  QA +   MP++F   +  FPAGL++YW  +N I+I+QQ+ I K 
Sbjct: 514 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINKS 561


>gi|240122686|ref|ZP_04735642.1| putative inner membrane protein translocase component YidC
           [Neisseria gonorrhoeae PID332]
 gi|240127387|ref|ZP_04740048.1| putative inner membrane protein translocase component YidC
           [Neisseria gonorrhoeae SK-93-1035]
 gi|260441339|ref|ZP_05795155.1| putative inner membrane protein translocase component YidC
           [Neisseria gonorrhoeae DGI2]
 gi|268681283|ref|ZP_06148145.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID332]
 gi|268685760|ref|ZP_06152622.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291044698|ref|ZP_06570407.1| inner membrane protein oxaA [Neisseria gonorrhoeae DGI2]
 gi|268621567|gb|EEZ53967.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID332]
 gi|268626044|gb|EEZ58444.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291011592|gb|EFE03588.1| inner membrane protein oxaA [Neisseria gonorrhoeae DGI2]
          Length = 545

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 139/575 (24%), Positives = 237/575 (41%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q      +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQKQAATASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      N P V  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFV--LFGDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +   T  ++L     N +  ++  +   + YL
Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKDSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   + N S      S   RI+R   +     +        +    + +  +  +SD+
Sbjct: 164 VNVRFDIANGSAQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +           +          
Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRSDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A  S     I  G    T   L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|239998129|ref|ZP_04718053.1| putative inner membrane protein translocase component YidC
           [Neisseria gonorrhoeae 35/02]
 gi|268593980|ref|ZP_06128147.1| inner membrane protein oxaA [Neisseria gonorrhoeae 35/02]
 gi|268547369|gb|EEZ42787.1| inner membrane protein oxaA [Neisseria gonorrhoeae 35/02]
          Length = 545

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 139/575 (24%), Positives = 236/575 (41%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q      +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQKQAATASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      N P V  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFV--LFGDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +   T  ++L     N +  ++  +   + YL
Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKDSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   + N S      S   RI+R   +     +        +    + +  +  +SD+
Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYAGPVVYTPEGNFQKVSFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +                      
Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCHIDIKRRSDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A  S     I  G    T   L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|320157824|ref|YP_004190203.1| inner membrane protein translocase component YidC, long form
           [Vibrio vulnificus MO6-24/O]
 gi|319933136|gb|ADV88000.1| inner membrane protein translocase component YidC, long form
           [Vibrio vulnificus MO6-24/O]
          Length = 539

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 132/549 (24%), Positives = 232/549 (42%), Gaps = 42/549 (7%)

Query: 22  QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGS 81
           Q + V         E+    +        +              + +  + +    L  S
Sbjct: 21  QQWQVAKNPAPQAVEQAQTSSTLPAPSFADELDPAPAQQ-----ASAKLITVTTDVLTLS 75

Query: 82  INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV 141
           I+  G      +L  Y  +++S +    L       + + A+   V         N+   
Sbjct: 76  IDTVGGDVVAADLNQYSAELNSANAFELLRDTQG--HQFIAQSGLVGPQGIDLSSNNRPS 133

Query: 142 WNLISGKILTPTTPIKLV----FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFS 197
           + + +          +L     ++       +  I     Y   +   V N S +     
Sbjct: 134 YQVSADSFTLADDQNELRIPMTYQANGLEYTKTFILKRGSYAIDVEFDVINKSGNNATLG 193

Query: 198 PRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGIS 255
               + ++      + T     G      D    +  + D++  ++S    +   W  + 
Sbjct: 194 MYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYSFEDMQDRNLSLTLANGQGWAAMI 253

Query: 256 DKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315
             Y+A+ +IP  E   +   + + +              TI  G S   T  L+AG K  
Sbjct: 254 QHYFAAAWIPRNEPGANLYTRVIGNMGD---IGVRMPNKTIADGDSAHFTATLWAGPKLQ 310

Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375
             +         P  ++++D+GW +FIAKP+  L+S   ++VGN+G+AI+  T  V+   
Sbjct: 311 DQMAEVA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQSVVGNWGVAIICLTFIVRGAM 365

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435
           +PL K QY S A M+ +QPK+  +RE+      Q + + M++LYK   +NPL GC P++L
Sbjct: 366 YPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPLIL 424

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           Q+P+F A+Y  +  S+E+RH+PF  WI DL+A DP                     I P+
Sbjct: 425 QMPIFIALYWALMESVELRHSPFILWIHDLSAQDPYF-------------------ILPL 465

Query: 496 IMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           +M  SMF+  KMSP    D  Q  I+ +MPV+F F    FP+GL++YW  SN+++++QQ+
Sbjct: 466 LMGGSMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQS 525

Query: 555 VIMKMHGAE 563
           +I K    +
Sbjct: 526 LIYKALEKK 534


>gi|194100143|ref|YP_002003283.1| putative inner membrane protein translocase component YidC
           [Neisseria gonorrhoeae NCCP11945]
 gi|240013310|ref|ZP_04720223.1| putative inner membrane protein translocase component YidC
           [Neisseria gonorrhoeae DGI18]
 gi|240117048|ref|ZP_04731110.1| putative inner membrane protein translocase component YidC
           [Neisseria gonorrhoeae PID1]
 gi|240120382|ref|ZP_04733344.1| putative inner membrane protein translocase component YidC
           [Neisseria gonorrhoeae PID24-1]
 gi|268602734|ref|ZP_06136901.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID1]
 gi|254773007|sp|B4RJJ2|OXAA_NEIG2 RecName: Full=Inner membrane protein oxaA
 gi|193935433|gb|ACF31257.1| Inner membrane protein oxaA [Neisseria gonorrhoeae NCCP11945]
 gi|268586865|gb|EEZ51541.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID1]
          Length = 545

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 139/575 (24%), Positives = 236/575 (41%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q      +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQKQAATASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      N P V  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFV--LFGDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +   T  ++L     N +  ++  +   + YL
Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKDSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   + N S      S   RI+R   +     +        +    + +  +  +SD+
Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +                      
Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCHIDIKRRSDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A  S     I  G    T   L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|119947213|ref|YP_944893.1| 60 kDa inner membrane insertion protein [Psychromonas ingrahamii
           37]
 gi|166977402|sp|A1T0M9|OXAA_PSYIN RecName: Full=Inner membrane protein oxaA
 gi|119865817|gb|ABM05294.1| protein translocase subunit yidC [Psychromonas ingrahamii 37]
          Length = 566

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 148/561 (26%), Positives = 237/561 (42%), Gaps = 47/561 (8%)

Query: 21  WQNFYVYPRIEEMNNERKNIQTVKQ-------------PNQVDNSYAAVLIDDRAQALSM 67
           +  +      +     +                      + V NS      D  +  L  
Sbjct: 20  YTAWVEEKTPQVAPQVQTEQVDSSVPASVASSANSANLSDGVPNSPQQSSTDATSTELPA 79

Query: 68  SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127
           S  V + N  L  +I+L G      +L  +   + S++P   L   S     Y A+   +
Sbjct: 80  SQSVTIANDELRLTISLVGGDIIKADLLQHDATLDSDTPYRLL--DSGNGFTYIAQSGLI 137

Query: 128 STANNIELPNSNTVWNLISGKILTPTT---PIKLVFKNANNILFERTISLDEHYLF-KIV 183
               +             +  +L          L F +A+  +F +T +L        + 
Sbjct: 138 GQGPDANKNGRPLYDTTDTESVLADGQAEVSTMLHFVDADGNIFIKTFTLKRGEYVTNVA 197

Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243
             + N +   +      ++       + +         A    ++  E+      +    
Sbjct: 198 YQIENKTDSPLNVQLYAQLRETLSDDSGSMVMPVYRGGAFSTTETRYEKYSFSDMQDGPL 257

Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303
                  W+ +   Y+ S +IPS           + D  A     F A   TI P     
Sbjct: 258 QKTTEGGWVAMLQHYFVSAWIPSPTDQNVLYSNIIQDKEAA--IGFKAPSKTIAPQSVAE 315

Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363
               L+ G K    +    K+      ++ +D+GW +FIA+P+F L+ +F  +VGN+G+A
Sbjct: 316 LETNLWVGPKIQEEMALVAKN-----LDLTVDYGWLWFIAQPLFKLLLFFQGIVGNWGVA 370

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L T  VK   +PL K QY S A M+ +QPKI ELRE+F     Q + KAM++LYK   
Sbjct: 371 IILITFTVKGALYPLTKAQYTSMAKMRLLQPKIKELREQF-GEDRQKVSKAMMELYKKEK 429

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           +NPL GC+PILLQ+P+F A+Y  +  S+E+RHAPF  WI+DL+  DP             
Sbjct: 430 VNPLGGCFPILLQMPIFIALYWSLMESVELRHAPFMLWIQDLSVQDPYY----------- 478

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
                   I PI+M +SMF   KMSP    D  Q  ++ +MPV+F F    FPAGL++YW
Sbjct: 479 --------ILPILMGVSMFFIQKMSPTTVQDPMQQKVMQFMPVIFTFFFLWFPAGLVLYW 530

Query: 543 SWSNVISIVQQAVIMKMHGAE 563
             SNV++++QQ +I +    +
Sbjct: 531 LMSNVVTLIQQTLIYRSFEKK 551


>gi|197120418|ref|YP_002140845.1| preprotein translocase subunit YidC [Geobacter bemidjiensis Bem]
 gi|254772787|sp|B5EGX9|OXAA_GEOBB RecName: Full=Inner membrane protein oxaA
 gi|197089778|gb|ACH41049.1| preprotein translocase subunit YidC [Geobacter bemidjiensis Bem]
          Length = 537

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 146/568 (25%), Positives = 246/568 (43%), Gaps = 45/568 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN--------NERKNIQTVKQPNQVDNS 52
           ME      +A+ LS+ ++YA+   +  P+             +                +
Sbjct: 1   ME--KRLIIAVLLSIGVLYAYSFIFPTPKPLTAPGAKQAAMSSASAPALPAAVAPTAGTA 58

Query: 53  YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
             A       QA +++  V +         + +G       L+ Y   V      + L++
Sbjct: 59  PLAAPAPQAGQAPAVAKDVTVDTDLYTAVFSTQGGGLKKFVLKKYKETVGPQGKDIVLVN 118

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
                N Y    D      + +   S +               ++     +  I F +  
Sbjct: 119 -ETAANRYALLSDSREFGLSPDALYSAS--TGEVKVTNGGKGSLEFTTTTSQGITFRKVY 175

Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRG-RIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230
           +   + Y   + + V N     +  +    +  R         + V        G   + 
Sbjct: 176 TFSGDAYRIGLTEEVQNAGNVALTGAVHLLQTSRVVEAKKEGRYEVHAPSTLSEGKVKVD 235

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
           +    D    +   + +  +W   +DKY+    I  K +   SQ +     +   Q    
Sbjct: 236 KL---DNLLKNPVQYGKDIAWSAFADKYFMDGIIADKGS--ISQVRITRPANDAIQRDIV 290

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
           +  +T+ PG+       ++ G K+   +          R + +ID+GWF  IAKP+   +
Sbjct: 291 SPTVTVAPGQRSAVNYAVYYGPKDLDILKLQGN-----RLDEVIDYGWFGPIAKPLVHSL 345

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
            + Y   GN+GIAI++ T  +KL+FFPL  K Y S  +M+ +QPK+ EL+EKFK      
Sbjct: 346 KFLYKYTGNYGIAIIIITFILKLVFFPLTHKSYKSMKDMQKLQPKMTELKEKFKNDRD-A 404

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           + +A+++LYKTH +NPL GC P+++QIPVFF +Y+ +  S+E+RHAPF+ WI DL+A DP
Sbjct: 405 MNRAVMELYKTHKVNPLGGCLPMVVQIPVFFGLYRALMYSIELRHAPFYLWITDLSAKDP 464

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                + PIIM ++MFIQ KM+P   D  QA ++  +P+VF F 
Sbjct: 465 YY-------------------VTPIIMGVTMFIQQKMTPTNMDPVQAKMMLMLPIVFTFM 505

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558
             +FP+GL+IYW  +NV++I QQ  I K
Sbjct: 506 FLNFPSGLVIYWLVNNVLTIAQQMYINK 533


>gi|229520178|ref|ZP_04409605.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TM 11079-80]
 gi|229342772|gb|EEO07763.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TM 11079-80]
          Length = 482

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 133/506 (26%), Positives = 226/506 (44%), Gaps = 37/506 (7%)

Query: 65  LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124
            + +  + +    L  SI+  G       L  Y  +++S    V L +     + + A+ 
Sbjct: 2   AAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQFIAQS 59

Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDEHYLF 180
             V         N+   + + +          +L     ++       +  I     Y  
Sbjct: 60  GLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELHIPMTYQANGIDYTKTFILKRGSYAV 119

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEK 239
            +V  V NNS  +        + ++   +  N       G      D    +  + D++ 
Sbjct: 120 DVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFDDMKD 179

Query: 240 SSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
            ++S     + +W+ +   Y+AS +IP  E       + +++              TI  
Sbjct: 180 RNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNKTIAN 236

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
           G        L+ G K    +         P  ++++D+GW +FIAKP+  L+S   + VG
Sbjct: 237 GDKAEFEATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQSFVG 291

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + M++L
Sbjct: 292 NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQEMMEL 350

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NPL GC PILLQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP        
Sbjct: 351 YKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY------ 404

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537
                        I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    FP+G
Sbjct: 405 -------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSG 451

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563
           L++YW  SN+++++QQ +I K    +
Sbjct: 452 LVLYWLVSNIVTLIQQTLIYKALEKK 477


>gi|254226943|ref|ZP_04920509.1| inner membrane protein, 60 kDa [Vibrio cholerae V51]
 gi|125620548|gb|EAZ48916.1| inner membrane protein, 60 kDa [Vibrio cholerae V51]
          Length = 482

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 134/506 (26%), Positives = 226/506 (44%), Gaps = 37/506 (7%)

Query: 65  LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124
            + +  + +    L  SI+  G       L  Y  +++S    V L +     + + A+ 
Sbjct: 2   AAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQFIAQS 59

Query: 125 DYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEHYLF 180
             V         N+   + + +             I + ++       +  I     Y  
Sbjct: 60  GLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRGSYAV 119

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEK 239
            +V  V NNS  +        + ++   +  N       G      D    +  + D++ 
Sbjct: 120 DVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFDDMKD 179

Query: 240 SSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
            ++S     + +W+ +   Y+AS +IP  E       + +++              TI  
Sbjct: 180 RNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNKTIAN 236

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
           G        L+ G K    +         P  ++++D+GW +FIAKP+  L+S   N VG
Sbjct: 237 GDKAEFEATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQNFVG 291

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G+AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+      Q + + M++L
Sbjct: 292 NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQEMMEL 350

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NPL GC PILLQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP        
Sbjct: 351 YKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY------ 404

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537
                        I P++M  SMF+  KMSP    D  Q  I+ +MPV+F F    FP+G
Sbjct: 405 -------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSG 451

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563
           L++YW  SN+++++QQ +I K    +
Sbjct: 452 LVLYWLVSNIVTLIQQTLIYKALEKK 477


>gi|148266439|ref|YP_001233145.1| 60 kDa inner membrane insertion protein [Geobacter uraniireducens
           Rf4]
 gi|189036352|sp|A5G9V4|OXAA_GEOUR RecName: Full=Inner membrane protein oxaA
 gi|146399939|gb|ABQ28572.1| protein translocase subunit yidC [Geobacter uraniireducens Rf4]
          Length = 528

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 149/564 (26%), Positives = 261/564 (46%), Gaps = 40/564 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME      +A+ LS+ ++YA+   +  P+ +++       Q+   P Q  +S + +    
Sbjct: 1   ME--KRVVIAVILSIAVLYAYSMIFPPPQKKDVVKPGPVPQSQTAPVQAVSSTSVLPAIM 58

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           +   +S+   V ++        + +GA    L L+ Y          V L++    +   
Sbjct: 59  QQGNVSVRDLV-VETDLFTAVFSTRGAGLKKLVLKRYKETSGPGGREVVLVNEEAAEK-- 115

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI--LFERTISLDEH- 177
                 ++   +  +  +    ++ +G  L       L F + +    +F+++     + 
Sbjct: 116 ---FSLLTEGKSFGIEPTVVYNSISNGLKLAGNEKGTLEFTSTSPTGIVFKKSYIFTGND 172

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + NNS  +   S              +      G + +  DK   E+     
Sbjct: 173 YRIDLHQELLNNSPTKFDGSLHLIGNNRIEAKPGDGRFEVYGPVTLADDKINTEK--VAD 230

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
                  + ++  W   +DKY+ +  +    +    +   ++  +   Q   S+  + + 
Sbjct: 231 FSKGPKQYDKNILWTAFADKYFMNAILSDNNSIAAVRLAKVNTNY--LQDDVSSPPLALN 288

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
           PG+S      +F G K+   +          R E  ID+GWF  +AKP+   + +FY+  
Sbjct: 289 PGQSAAVNYRIFYGPKDLEILKGQGS-----RLEEAIDFGWFSALAKPLLRTLKFFYSYT 343

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+GIAI++ TV +KLLFFPL  K Y S   M+ +QPK+ EL+EKFK      + +A++ 
Sbjct: 344 HNYGIAIIIITVILKLLFFPLTHKSYKSMKEMQKLQPKMAELKEKFKNDRD-AMNRAVMD 402

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYKTH +NP+ GC P+++QIPVFFA+YK +  S+E+RHAPF  WI DL+A DP       
Sbjct: 403 LYKTHKVNPMGGCLPMIVQIPVFFALYKALMFSIELRHAPFMLWIMDLSAKDPYY----- 457

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537
                         + P+IM ++MF+Q KM+P   D  QA ++  +PVVF F   +FP+G
Sbjct: 458 --------------VTPVIMGVTMFVQQKMTPSNMDPVQAKMMLALPVVFTFMFLNFPSG 503

Query: 538 LIIYWSWSNVISIVQQAVIMKMHG 561
           L++YW  +N+++I QQ  I K   
Sbjct: 504 LVLYWLVNNILTIAQQTYINKSLP 527


>gi|46579490|ref|YP_010298.1| inner membrane protein, 60 kDa [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602960|ref|YP_967360.1| 60 kDa inner membrane insertion protein [Desulfovibrio vulgaris
           DP4]
 gi|81699125|sp|Q72D53|OXAA_DESVH RecName: Full=Inner membrane protein oxaA
 gi|259515685|sp|A1VER7|OXAA_DESVV RecName: Full=Inner membrane protein oxaA
 gi|46448904|gb|AAS95557.1| inner membrane protein, 60 kDa [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563189|gb|ABM28933.1| protein translocase subunit yidC [Desulfovibrio vulgaris DP4]
 gi|311233305|gb|ADP86159.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio
           vulgaris RCH1]
          Length = 534

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 142/571 (24%), Positives = 233/571 (40%), Gaps = 51/571 (8%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
             N    +A+ LS I++  W     Y+    + +    +          V  S    +  
Sbjct: 1   MENKRAIIAVVLSFIVLVGWGYLSEYMGWTPKSVPATEQKTAASAPAPSVVTSAPEAVTP 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A + S    V +  P     ++  G       L  YH+ +  ++  V L+  S  + A
Sbjct: 61  APAFSPSTGHEVTVTTPLYKAVLHSGGGVLRQFMLSRYHMGIDRDAAPVNLIESSAIRVA 120

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGK-ILTPTTPIKLVF--KNANNILFERTISLDE 176
               L       N +   +   W    G   L       L F        +        +
Sbjct: 121 PLGLLV------NGQPSWNTGQWAFEGGDLNLADGQTGTLRFVGSVDGLRVVRELEFHAD 174

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            YL      +               +         + + +    +A   D S  E+  S 
Sbjct: 175 SYLVTEKLHLAPEGDAPRTARVGFTLGTTSLTPGESQYNL--TRVAWFADGSFSEKS-ST 231

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
            +         S  W G+   Y+ +   P                   Y+      +  +
Sbjct: 232 GDLEKGVLIDGSIDWAGVMSNYFLAAVAPKD----TRAVLKGKLEGGVYRVAVERPDQMV 287

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
            PG S       + G KE   ++    +         ID GWF FIA+P+  L+ +FY  
Sbjct: 288 NPGNSDVIVCNYWFGPKERDLLNAAPNN-----LGKAIDLGWFGFIARPLVTLLDFFYKY 342

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           VGN+G AI+L T+ +KL+F+PL+ K Y S   MK +QP + ++REK      ++  + M+
Sbjct: 343 VGNYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQPMLAKVREKHADDREKM-NEEMM 401

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIKDLAAA 468
           +LYKT+ +NP  GC P+L+QIPVFF +Y+ +  ++E+RHAPF          W+ DL+A 
Sbjct: 402 RLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHAPFIAHVPFTDIVWLADLSAK 461

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP                     + P++M  +MF+Q K++PP  D  QA ++ +MPVVF 
Sbjct: 462 DPFY-------------------VTPLVMGATMFLQQKLTPPAGDPTQAKVMMFMPVVFT 502

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           F   +FP+GL++YW  +NV+SI QQ  I++ 
Sbjct: 503 FLFLNFPSGLVVYWLCNNVLSIAQQWWILRK 533


>gi|326562320|gb|EGE12646.1| putative inner membrane protein translocase component YidC
           [Moraxella catarrhalis 103P14B1]
          Length = 557

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 127/569 (22%), Positives = 233/569 (40%), Gaps = 42/569 (7%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M++     + IA+   + +++ AW++ Y    +       +         QV     ++ 
Sbjct: 11  MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTHADVPTTQVVGDIPSLT 70

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
               A  L+ +  + +        IN  G       L+ ++    S  P V L       
Sbjct: 71  AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETNS 126

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174
             Y A+   +               +  S         +  + L +      + +     
Sbjct: 127 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 186

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230
              Y   +   + NNS    +     ++ R   +          G+        G  S  
Sbjct: 187 AGQYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 246

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
             K          N    + W+ I   Y+ S + PS         +        +   ++
Sbjct: 247 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGKD---FYIGYN 303

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
           +  I +  GK IT  + L+AG K    +    +          +D+G  + I+K +F ++
Sbjct: 304 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAVL 358

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
                ++GN+G +I++ T+ +K+  F L+ K Y+S A M+ I PK+  L++K        
Sbjct: 359 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 417

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           + + M+QLY+   +NP+AGC PIL+Q+P+F  +Y V+  S+E+RHAP+ GWI DL+A DP
Sbjct: 418 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWVLVESVELRHAPWIGWITDLSAMDP 477

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I PI M ++MF+Q  ++P P D  QA ++  +P++FV  
Sbjct: 478 WF-------------------ILPIFMGMTMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 518

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +  FPAGL++YW+ +N+ S+  Q ++ K 
Sbjct: 519 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 547


>gi|293611389|ref|ZP_06693685.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826261|gb|EFF84630.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 586

 Score =  323 bits (827), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 134/588 (22%), Positives = 241/588 (40%), Gaps = 67/588 (11%)

Query: 11  IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
              + +++ AWQ  Y                 E++ +  N +     + V  +  A    
Sbjct: 14  FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKNATVASDVPQANIAQSQT 73

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             A A      + ++       IN KG     + L  +     S+ P V L + +     
Sbjct: 74  TDATAPVNQQLISVQTDLYHIWINPKGGDIVRIELLSHDKSKDSDQPFVMLENDAK--RT 131

Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164
           Y A+   +             ++                   G+         +      
Sbjct: 132 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQKGQSEKVLNVPMVFKTPEG 191

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220
             + +        Y   +   V N S    +    G++ R   +     +   F +    
Sbjct: 192 VEIIKTFTFTQGQYPIVVKHQVINRSQQSWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 251

Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271
               G       + K+++  +  ++       W+ I   Y+ S +IP       +    +
Sbjct: 252 GGAWGTPDAHYNKLKFANFSEEKVN-TEAKGGWVAIVQHYFVSAWIPGNLKLTQANGQPY 310

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            ++ +            F++  I +  G S+     L++G K    +             
Sbjct: 311 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 365

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ 
Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 425

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           I P++  ++E+F         + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+
Sbjct: 426 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+RHAP+ GWI+DL+A DP                     I P+IM  +MF Q  ++P P
Sbjct: 485 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 525

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           AD  QA +   MP++F   +  FPAGL++YW  +N I+I+QQ+ I K 
Sbjct: 526 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINKS 573


>gi|326563097|gb|EGE13370.1| putative inner membrane protein translocase component YidC
           [Moraxella catarrhalis 12P80B1]
          Length = 557

 Score =  323 bits (827), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 126/569 (22%), Positives = 233/569 (40%), Gaps = 42/569 (7%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M++     + IA+   + +++ AW++ Y    +       +         QV     ++ 
Sbjct: 11  MQKILRILIIIAMLITAYLLILAWRDDYARKPVVMQPVATQTTHADVPTTQVVGDIPSLT 70

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
               A  L+ +  + +        IN  G       L+ ++    S  P V L       
Sbjct: 71  AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETDL 126

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174
             Y A+   +               +  S         +  + L +      + +     
Sbjct: 127 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 186

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230
              Y   +   + NNS    +     ++ R   +          G+        G  S  
Sbjct: 187 AGKYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 246

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
             K          N    + W+ I   Y+ S + PS         +        +   ++
Sbjct: 247 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGKD---FYIGYN 303

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
           +  I +  GK IT  + L+AG K    +    +          +D+G  + I+K +F ++
Sbjct: 304 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQAVDYGLLWPISKVLFAIL 358

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
                ++GN+G +I++ T+ +K+  F L+ K Y+S A M+ I PK+  L++K        
Sbjct: 359 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 417

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           + + M+QLY+   +NP+AGC PIL+Q+P+F  +Y ++  S+E+RHAP+ GWI DL+A DP
Sbjct: 418 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDP 477

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530
                                I PI M ++MF+Q  ++P P D  QA ++  +P++FV  
Sbjct: 478 WF-------------------ILPIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 518

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +  FPAGL++YW+ +N+ S+  Q ++ K 
Sbjct: 519 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 547


>gi|319778792|ref|YP_004129705.1| Inner membrane protein translocase component YidC, long form
           [Taylorella equigenitalis MCE9]
 gi|317108816|gb|ADU91562.1| Inner membrane protein translocase component YidC, long form
           [Taylorella equigenitalis MCE9]
          Length = 549

 Score =  323 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 155/566 (27%), Positives = 250/566 (44%), Gaps = 34/566 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQ-PNQVDNSYAAVLI 58
                  + +     +   W N+  Y  P       E+         P+   NS A   I
Sbjct: 1   MEFKRTLLWMIFVFSLFTLWSNWKSYNNPAPLNTVTEQNQSPATPSVPSADTNSPATAPI 60

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
              +     S ++ +K+  L  + +  GAQ    +L  +H       P  TLL       
Sbjct: 61  KTNSVVSEDSEKITVKSDVLNLTFDTVGAQLIKADLLKHHSAEDKALPT-TLLDFKKDIF 119

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
              + +   +      +  +   +      +      I    ++    +          Y
Sbjct: 120 TVQSGVLSQTPNKQFPIQTTQFKYVSTDENLSGDKKDIIFEAESDGIKVRRTYTLNKGSY 179

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
                D ++N S + I      +I R    P+ +T+      G+      +   +  + D
Sbjct: 180 DITFKDEISNLSSEAISPIHYVQITRDGAKPKDSTSMTNSYWGYAVYSEKEKFEKVPFKD 239

Query: 237 IEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           I+  S       S+ W+     Y+ + ++  K    H +F+    G   Y A  S     
Sbjct: 240 IDDRSAEYVSKTSDGWISFIQHYFVTAWVLEKGKEHHIEFR--KAGQNLYAASASQVLGA 297

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I P +++T ++ L+ G ++   +         P    ++++GW  FIAKPMF LMS+   
Sbjct: 298 IAPQQTVTVSSHLWVGPQDQKALVKLH-----PNLNTVVNYGWLTFIAKPMFALMSWINT 352

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           L+GN+G  I++ TV +KLL +PL+   Y S A MKNI P++  L+E++     Q L  AM
Sbjct: 353 LIGNWGWTIVVLTVIIKLLLYPLSATSYKSMARMKNISPRMKLLKEQYGDDK-QKLNAAM 411

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           +QLYKT  INPL GC PILLQIP+F  +Y+VI  S+E+R A + GWI DL+A DP     
Sbjct: 412 MQLYKTEKINPLGGCLPILLQIPIFLTLYRVILSSVELRGASWIGWITDLSAQDPYY--- 468

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
                           I P +M L+MF+QM+M+P P D  QA I+  MP+VF   +  FP
Sbjct: 469 ----------------ILPTLMILTMFLQMRMNPTPPDPTQAKIMMIMPLVFGAMMFFFP 512

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHG 561
           AGL++YW+ ++++SI+QQ    K   
Sbjct: 513 AGLVLYWTVNSLLSILQQWYNTKRFT 538


>gi|332286192|ref|YP_004418103.1| putative inner membrane protein translocase component YidC
           [Pusillimonas sp. T7-7]
 gi|330430145|gb|AEC21479.1| putative inner membrane protein translocase component YidC
           [Pusillimonas sp. T7-7]
          Length = 565

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 149/531 (28%), Positives = 250/531 (47%), Gaps = 34/531 (6%)

Query: 39  NIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98
                  P    +    V  D   +  + S +V +       + +  GAQ     L  Y 
Sbjct: 59  PNAAPSTPAATPSGNETVPSDSTPEQAAASQKVNVTTDVYDLTFDTVGAQLVKAELVKYT 118

Query: 99  LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPI 156
              S + P+V L   +++ + Y A+   +   N    P   T + L+S +      T  I
Sbjct: 119 APGSKDQPMVLL--DNSSTSTYLAQTGVIGAPNGQSYPTHLTPFKLVSSETSLTGDTLDI 176

Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTF 214
               +     + +        Y   +   + N   + I  S   +++R    P  +++ +
Sbjct: 177 VFEAQADGVKVVKTYTLHKGRYDIDVKHDIYNLGTEPITPSLYLQLVRDGNDPSDSSSFY 236

Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHS 273
               G       +   +  +SDI+K   S   +  N W+G+   Y+AS +IP++ T  H+
Sbjct: 237 STFTGPALYSAGEKFQKITFSDIDKGKASYTQQADNGWIGMVQHYFASAWIPAQGTVRHN 296

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
           +   LS+    Y  +   +   I PG++++    L+ G ++   +         P  E++
Sbjct: 297 ETLRLSNN--LYAIRSIESAGAIQPGQNVSVEANLWVGPQDQKAMGELA-----PGLELV 349

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+GW   IAKP+F +M++ + L+GN+G  I+  T  +KL+F+PL+   Y S A MK + 
Sbjct: 350 VDYGWLTIIAKPLFKIMTWLHALLGNWGWTIVALTFLIKLVFYPLSAASYRSMAKMKQVT 409

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P++  LREKF     + L  AM+++Y+T  INPL GC P+++QIPVF ++Y V+  S+EM
Sbjct: 410 PRLQALREKFGDDKAK-LNAAMMEMYRTEKINPLGGCLPMVVQIPVFISLYWVLLGSVEM 468

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R AP+  WI+DL+  DP                     I P  M  +MF+Q+K++P P D
Sbjct: 469 RGAPWILWIQDLSVRDPWF-------------------ILPAFMMATMFLQIKLNPTPPD 509

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
             QA I+  MP+VF   +  FPAGL++YW  +N +SI QQ  IM     E 
Sbjct: 510 PTQAKIMMIMPLVFGGMMFFFPAGLVLYWCVNNAVSIAQQRYIMHKLDKET 560


>gi|109900610|ref|YP_663865.1| 60 kDa inner membrane insertion protein [Pseudoalteromonas
           atlantica T6c]
 gi|123360110|sp|Q15MS7|OXAA_PSEA6 RecName: Full=Inner membrane protein oxaA
 gi|109702891|gb|ABG42811.1| protein translocase subunit yidC [Pseudoalteromonas atlantica T6c]
          Length = 543

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 139/568 (24%), Positives = 249/568 (43%), Gaps = 35/568 (6%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME   ++ + I L   S ++   WQ  Y     + + +++         N          
Sbjct: 1   MESQRSFLL-IGLAMVSFLLWQQWQVDYGPQPAQPVESQQTTGSDAPNSNGDVPIATPTN 59

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
                    +   + +   +L  SIN  G      NL  Y L+  S     +LL PS   
Sbjct: 60  KSALPTQSVVGKVISVTTDTLQLSINTVGGDVISANLLKYPLEQGS-QGTYSLLRPSGPT 118

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DE 176
             + A+   V T    +        +  S  +   +  + L +   + +L  +       
Sbjct: 119 -IFVAQSGLVGTNGIDKGSRPTYSVSQDSFVMEGDSLTVPLTYTAKSGLLVTKEFIFSKN 177

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            +  K+   V N S D       G++ +       + F       A   +    E+   D
Sbjct: 178 SHEVKVNYHVENTSSDVKSVKQFGQLKQSTADQGGSMFMPTYRGGAFSTEDERYEKYSFD 237

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
             +    N      W  + + Y+ S ++P ++ +     K   +G+A     F    + I
Sbjct: 238 DMQDKNLNQVTPAGWTAMIEHYFVSAWVPPQDQTNSLYSKMTQNGNA--IIGFIGQSVDI 295

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
            PG+S+   + L+ G K+  T+    +       ++ +D+G+ ++I+K +F  + + ++L
Sbjct: 296 EPGQSVDIQSSLYLGPKDQDTLEKIAR-----GLDLTVDYGFLWWISKYLFAFLQFIHSL 350

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           +GN+G +I+L T+ VK   +PL K QY S A M+ ++PK+D L+E++     Q +Q+AM+
Sbjct: 351 IGNWGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDK-QKMQQAMM 409

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           ++YK   +NP+ GC+P+LLQ+P+F A+Y V+  S+E+RHA F  WI DL+  DP      
Sbjct: 410 EMYKKDKVNPMGGCFPLLLQMPIFLALYWVLLESVELRHANFIFWITDLSVKDPYF---- 465

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFP 535
                          + PI+  LSM++  K+ P    D  Q  I+ +MPV        FP
Sbjct: 466 ---------------VLPILTGLSMYLLQKLQPMTMTDPMQQKIMQFMPVAMSLFFFIFP 510

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           AGL++YW  SN+I+++Q  +I       
Sbjct: 511 AGLVLYWLISNIITLIQAKIIYASMEKR 538


>gi|241665033|ref|YP_002983393.1| inner membrane protein translocase component YidC [Ralstonia
           pickettii 12D]
 gi|240867060|gb|ACS64721.1| 60 kDa inner membrane insertion protein [Ralstonia pickettii 12D]
          Length = 554

 Score =  322 bits (825), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 145/579 (25%), Positives = 246/579 (42%), Gaps = 52/579 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM----------------NNERKNIQTVK 44
           M+      + +  S+ +V  + N+      + M                +    ++    
Sbjct: 1   MDI-KRTILWVIFSLAVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGSTPAGDVPKSA 59

Query: 45  QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                  S AA      +QA + S ++ +    L  +I+  GA    L L         +
Sbjct: 60  SATAAAGSQAAPATGAASQAPA-SEKIVISTDLLRATIDTDGAIVTKLELLDQK---DHD 115

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
              + L    + +  Y A    +   +        T               I L      
Sbjct: 116 GNPMVLF-DRSVERTYLARSGLIG-GDFPNHTTVFTASAGPRDLGTGNDVSITLTADKGG 173

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAV 223
             L +  +     Y+      VTN+    I  +    + R       +  +    G    
Sbjct: 174 AKLAKTYVFKRGSYVIDTRFDVTNDGTAPINPTLYMELARDGGAVEQSRFYSTFTGPAVY 233

Query: 224 LGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                  +  ++DI+K          + W+ +   Y+AS +IP+       ++       
Sbjct: 234 TDGDKFHKITFADIDKGKAQVPAPTDSGWVAMVQHYFASAWIPADN--VKREYYVNRVDT 291

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             Y+        T+ PG S++ T  LFAG ++   +         P  +++ D+GW   +
Sbjct: 292 NFYRIGIQEPLGTVAPGASVSATARLFAGPQQARMLESIT-----PGLDLVKDYGWLTIV 346

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           AKP+F L+   + L+GN+G +I+  TV +KL+FFPL+   Y S A MK++QP++  +RE+
Sbjct: 347 AKPLFWLLEKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRER 406

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
            K   PQ + + M+ LY+T  +NPL GC PI++QIPVF A+Y  +  S+EMR AP+ GW+
Sbjct: 407 HKG-DPQKMNQEMMTLYRTEKVNPLGGCLPIVIQIPVFMALYWALLSSVEMRGAPWIGWV 465

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DL+  DP                     I P++M++SMF+Q K++P P D  QA ++ +
Sbjct: 466 HDLSTPDPFY-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKVMMF 506

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           MP+ F      FPAGL++YW  +N +SI QQ  I +M G
Sbjct: 507 MPIAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 545


>gi|187930818|ref|YP_001901305.1| putative inner membrane protein translocase component YidC
           [Ralstonia pickettii 12J]
 gi|309780186|ref|ZP_07674937.1| membrane protein insertase, YidC/Oxa1 family [Ralstonia sp.
           5_7_47FAA]
 gi|254773015|sp|B2U820|OXAA_RALPJ RecName: Full=Inner membrane protein oxaA
 gi|187727708|gb|ACD28873.1| 60 kDa inner membrane insertion protein [Ralstonia pickettii 12J]
 gi|308920889|gb|EFP66535.1| membrane protein insertase, YidC/Oxa1 family [Ralstonia sp.
           5_7_47FAA]
          Length = 554

 Score =  322 bits (825), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 145/579 (25%), Positives = 248/579 (42%), Gaps = 52/579 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM----------------NNERKNIQTVK 44
           M+      + +  S+ +V  + N+      + M                +    ++ +  
Sbjct: 1   MDI-KRTILWVIFSLAVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGSTPAGDVPSNA 59

Query: 45  QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                  S AA      +QA + S ++ +    L  +I+  GA    L L         +
Sbjct: 60  STAAAAGSQAAPATGAASQAPA-SEKIVISTDLLRATIDTDGAIVTKLELLDQK---DHD 115

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
              + L    + +  Y A    +   +                        I L      
Sbjct: 116 GNPMVLF-DRSVERTYLARSGLIG-GDFPNHTTVFAASPGPRDLGTGNDVSITLTADKGG 173

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAV 223
             L +  +     Y+      VTN+    I  +    + R       +  +    G    
Sbjct: 174 AKLAKTYVFKRGSYVIDSRFDVTNDGTAPINPTLYLELARDGGAVEQSRFYSTFTGPAVY 233

Query: 224 LGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                  +  ++DI+K         ++ W+ +   Y+AS +IP+       ++       
Sbjct: 234 TDGDKFHKITFADIDKGKAQVPAPTNSGWVAMVQHYFASAWIPADN--VKREYYVNRVDT 291

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             Y+        T+ PG S++TT  LFAG ++   +         P  +++ D+GW   +
Sbjct: 292 NFYRIGIQEPLGTVAPGASVSTTARLFAGPQQARMLEAIT-----PGLDLVKDYGWLTIV 346

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           AKP+F L+   + L+GN+G +I+  TV +KL+FFPL+   Y S A MK++QP++  +RE+
Sbjct: 347 AKPLFWLLEKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRER 406

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
            K   PQ + + M+ LY+T  +NPL GC PI++QIPVF A+Y  +  S+EMR AP+ GW+
Sbjct: 407 HKG-DPQKMNQEMMTLYRTEKVNPLGGCLPIVIQIPVFMALYWALLSSVEMRGAPWIGWV 465

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DL+  DP                     I P++M++SMF+Q K++P P D  QA ++ +
Sbjct: 466 HDLSTPDPFY-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKVMMF 506

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           MP+ F      FPAGL++YW  +N +SI QQ  I +M G
Sbjct: 507 MPIAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 545


>gi|254670910|emb|CBA07484.1| probable inner-membrane protein [Neisseria meningitidis alpha153]
          Length = 545

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 135/575 (23%), Positives = 233/575 (40%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q V    +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQTAQQQAVTASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      N P +  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +      ++L       +  ++  +     YL
Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   + N S      S   RI+R   +     +        +    + +  +  +SD+
Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +           +          
Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y    S     I  G    T   L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSTSVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLY    INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|91790727|ref|YP_551679.1| protein translocase subunit yidC [Polaromonas sp. JS666]
 gi|91699952|gb|ABE46781.1| protein translocase subunit yidC [Polaromonas sp. JS666]
          Length = 580

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 136/603 (22%), Positives = 244/603 (40%), Gaps = 66/603 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM--------------------------- 33
           M       + +     +V  W  + VY   +                             
Sbjct: 1   MNDIRRTILWVIFGFSMVLLWDQWQVYNGQKATFFPATTQSAKAPAAATSAPAASASSVP 60

Query: 34  --NNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDD 91
              +    +  V          A         A +   RV +    L  + + +G     
Sbjct: 61  VSPSTASAVPAVPGSAPGAAPGAVPAGAPSPAAAATRERVVVNTDVLALTFDSEGGTLVH 120

Query: 92  LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151
                +    ++++  V L    +T   Y A+   +++      P   T+  ++ G+   
Sbjct: 121 SAFTRFKDMANTDAGFVLL--DESTNRVYVAQTGLIASGTGGTFPTHKTLMTVVPGERSL 178

Query: 152 PTTPIKLVFKN-----ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK 206
                +L  K          L +        Y   +   V N     +      +++R  
Sbjct: 179 KDGQNELQVKFESADLGGVKLVKTYTLKRGSYDIAVRHDVINTGSAPVAPQLYMQLVRDG 238

Query: 207 --PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVF 263
             P   ++ +    G       K   + ++ DIE + +      +N ++ +   Y+A+ +
Sbjct: 239 NKPPGESSFYSTFTGPAIYTEAKKYQKVEFKDIENNKVDVEKQATNGYVAMVQHYFAAAW 298

Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323
           I +         + +      Y         +I PG + T  + LF G +E   +     
Sbjct: 299 ILADGLKRDLFLRKVDAN--LYAVGLITPLDSIAPGATKTIDSRLFVGPQEEKKLEALA- 355

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
               P  E++ D+GW   +AKP++ L+   +  + N+G +I+   + +K+ F+ L  K Y
Sbjct: 356 ----PGLELVKDYGWLTILAKPLYWLLDKLHGFLLNWGWSIVALVLLLKIAFYWLNAKAY 411

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            S A MK I PKI E+RE+ K   PQ +Q+AM+++Y+   +NP+ GC+PI++QIPVF A+
Sbjct: 412 ASMAKMKAINPKIMEMRERLKD-KPQEMQQAMMKIYREEKVNPMGGCFPIMVQIPVFIAL 470

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           Y V+  S+EMR+AP+  WI DL+A DP                     I P++M+L+  +
Sbjct: 471 YWVLLSSVEMRNAPWVLWIHDLSAPDPFF-------------------ILPVLMTLTTML 511

Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           Q  ++P P D  QA ++ +MP++F      FPAGL++YW  +N++SI QQ VI    G  
Sbjct: 512 QTALNPAPPDPMQAKLMWFMPLIFSVMFFFFPAGLVLYWITNNILSIAQQWVINTRMGVP 571

Query: 564 IGL 566
              
Sbjct: 572 PQF 574


>gi|148654185|ref|YP_001281278.1| putative inner membrane protein translocase component YidC
           [Psychrobacter sp. PRwf-1]
 gi|148573269|gb|ABQ95328.1| protein translocase subunit yidC [Psychrobacter sp. PRwf-1]
          Length = 566

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 126/584 (21%), Positives = 234/584 (40%), Gaps = 57/584 (9%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ------------ 45
           M++     + IA+   + ++V AWQ  Y        +    ++ T               
Sbjct: 1   MQKILRVLIIIAMLITAYLLVLAWQKDYANVPATSADAVTPSVSTSTTGADIPTTAGASD 60

Query: 46  -PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
            P        +   D  +        + +        I+  G       LR Y+  + S+
Sbjct: 61  IPAATATDIPSSKADSESTEAKAGTLINVTTDRYQVKIDPVGGDVVYAALRDYNAKLHSD 120

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT---PIKLVFK 161
           +  V L    + +  Y A+   +                     ++ P      + L +K
Sbjct: 121 NSFVLL--EDSGQRVYVAQSGLIGPNGIDTASGRAKYSYQSDNYVMQPGQKTLTVPLTYK 178

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT------FG 215
                + +        Y  ++   + N            ++ R   +    +        
Sbjct: 179 QDGVTITKSFTFTQGKYPIRVNYNINNTGTQPWNGQVFAQLKRDSSKDPGMSDKGALSMA 238

Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275
              G      D    + K+ D     ++       W+GI   Y+ S + P+    F  QF
Sbjct: 239 TYLGGAWGTPDDDYNKLKFKDFNDGELTA-ASDKGWVGIVQHYFVSAWTPNN---FTGQF 294

Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
                    +    ++  I +   K    T  L+AG K+  ++         P     +D
Sbjct: 295 FSREKAGDHF-IGMNSEPIVVPANKQKDVTATLYAGPKDQESLIEVA-----PGLNKTVD 348

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           +G+ + I+K +F ++   + ++GN+G +I+  T+ VK+     + K Y S A M+ I P+
Sbjct: 349 YGFLWPISKVLFAILEGIHKVIGNWGWSIIALTLLVKIALMWFSNKSYYSMAKMRAIAPR 408

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           +  L+E+      ++  + M+ +YK   +NP+AGC PILLQ+P+F A+Y V+  S+E+RH
Sbjct: 409 LQALKEEHGDDRMKM-SQEMMAIYKEEQVNPMAGCLPILLQMPIFLALYWVLVESVELRH 467

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           AP+  WI+DL+A DP                     I P++M  SMF Q   SP P D  
Sbjct: 468 APWILWIQDLSAMDPWF-------------------ILPMLMGASMFAQQMFSPQPTDPM 508

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           QA ++ ++P++F   +  FPAGL++YW+ +N+ ++ QQ ++ K 
Sbjct: 509 QAKVMKFLPIIFTLFMLFFPAGLVLYWTVNNLFTMGQQYIVNKK 552


>gi|240079892|ref|ZP_04724435.1| putative inner membrane protein translocase component YidC
           [Neisseria gonorrhoeae FA19]
 gi|268596034|ref|ZP_06130201.1| inner membrane protein oxaA [Neisseria gonorrhoeae FA19]
 gi|268549822|gb|EEZ44841.1| inner membrane protein oxaA [Neisseria gonorrhoeae FA19]
          Length = 545

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 139/575 (24%), Positives = 237/575 (41%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q      +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQKQAATASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      N P V  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFV--LFGDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +   T  ++L     N +  ++  +   + YL
Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKDSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   + N S      S   RI+R   +     +        +    + +  +  +SD+
Sbjct: 164 VNVRFDIANGSAQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +           +          
Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRSDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A  S     I  G    T   L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTISQQWHINRS 533


>gi|145590263|ref|YP_001156860.1| 60 kDa inner membrane insertion protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|189036355|sp|A4T0N2|OXAA_POLSQ RecName: Full=Membrane protein oxaA
 gi|145048669|gb|ABP35296.1| protein translocase subunit yidC [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 557

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 149/586 (25%), Positives = 258/586 (44%), Gaps = 53/586 (9%)

Query: 1   MERNWNYFVAIA-LSVIIVYA-WQNFYVYPRI----EEMNNERKNIQTVKQPNQVDNSYA 54
           M+       A+  LS +++Y  WQ     P +            N            + +
Sbjct: 1   MDFKKTILWAVFSLSGLMLYNNWQVHEGKPSMFGGAPATTASAPNKSGAPAKLDTPVAIS 60

Query: 55  AVLIDDR-----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
            +    +     +  +  + +  L+N  L   I+  GA   D  L     +++++   V 
Sbjct: 61  GIPSVTQTPTANSAPVESTQKFVLENELLSVEISAAGANVVDAKLLK---ELTADQKPVE 117

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           +       + Y A    V+  N     +++      SGK  +    + L  +     L +
Sbjct: 118 IFQ-HTPTHTYVARSGLVAVGNTDLPNHTSLFKLDRSGKDGSGRPFLVLSSERNGVKLEK 176

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-------PQTATNTFGVQEGFIA 222
             +     Y   +   VT  + +         I+R         P     +     G   
Sbjct: 177 TFLLNPGSYDIYVGHRVTQVTPNGAPLILYTEIVRDGSEEKKIGPFGGAFSASTFTGPAI 236

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHE----SNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
                   +  ++DIEK+  +   +       W+ +   Y+AS +IP  +         +
Sbjct: 237 YTDGGKYKKVSFADIEKNKFTAPSQIAAGQPGWVAMVQHYFASAWIPDDKLPRDIYSGKI 296

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
            +    Y+        TI  G ++     LF G +E   +         P  E+L D+G+
Sbjct: 297 DN--DLYRVGMQTQLGTIATGTTVMANAQLFVGPQEERMLETIA-----PGLELLKDYGY 349

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              +AKP+F L+ + +N+VGN+G +I+L TV +KL FFPL+   Y S A MK +QP++  
Sbjct: 350 LTILAKPIFWLLEHIHNIVGNWGWSIILLTVLIKLAFFPLSAASYKSMARMKEVQPRLAA 409

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           ++E++K   PQ L +AM+++Y+   INPL GC P+++QIPVF ++Y V+  S+EMR AP+
Sbjct: 410 MKEQYKG-EPQKLNQAMMEMYRKEKINPLGGCLPVVIQIPVFISLYWVLLSSVEMRGAPW 468

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
             WI DL+  DP                     I P++M++SMF+Q K++P P D  QA 
Sbjct: 469 ILWIHDLSVPDPYY-------------------ILPVVMAVSMFVQTKLNPTPPDPVQAK 509

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           ++ +MP+VF      FPAGL++YW  +N++SI QQ  I ++ G + 
Sbjct: 510 VMMYMPIVFSIMFFFFPAGLVLYWVTNNLLSIAQQWQINRLFGKKP 555


>gi|258406259|ref|YP_003199001.1| membrane protein insertase, YidC/Oxa1 family [Desulfohalobium
           retbaense DSM 5692]
 gi|257798486|gb|ACV69423.1| membrane protein insertase, YidC/Oxa1 family [Desulfohalobium
           retbaense DSM 5692]
          Length = 550

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 143/586 (24%), Positives = 251/586 (42%), Gaps = 65/586 (11%)

Query: 1   MERN-WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           M+ N     VA+ LS I++  W   +   +    +N+  N    + P   ++S + V   
Sbjct: 1   MDDNTKRVIVAVVLSFIVIVGWNFLFPPQQPPTQSNQAANQTQQETPTVAEDSSSQVPGA 60

Query: 60  DRA------------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
            +                          RV ++ P    +IN  G   + L L+ Y   +
Sbjct: 61  SQTGDGVVAGRAQQSLSGSTYSPEGSGKRVTVETPLYKATINAAGGVLEHLVLKQYQEAI 120

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161
           +  +  V L++    +    A +  +             +           +  + LV  
Sbjct: 121 NPGAKNVDLITRGTVQK---APMGLIWQQRPTWSEADWELQGNDLQLGQGESGSLTLVGT 177

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
                L        E YL      V N     +  +    +   +    +          
Sbjct: 178 IDGVRLERTLHFSAETYLIDETLNVANARDHSLTGTVSFTMASEQLAEES----RYNRTE 233

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281
            +  +  L ++  +D  +  I +  E+ SW GI+  Y+    +P+               
Sbjct: 234 LIYFNGGLNKESDTDELQIGI-HPAETVSWGGIASNYFLLAAVPTSG-----NMDLRGKY 287

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
                     +++ + P +S   +   + G KE   +    ++         I +GWF F
Sbjct: 288 EDEIYRVALGSQVAVAPEQSAELSCSYYVGPKESEQLAQAPQN-----LLAAIQYGWFDF 342

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           IAKP+  ++ +FY+ VGN+G+AI+L T+ +K++F+PL++K Y S   MK +QP + +L+E
Sbjct: 343 IAKPLIKVLKFFYSYVGNYGVAIILLTILIKIVFWPLSQKSYKSMEKMKKLQPMMTQLKE 402

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA----- 456
           K+     Q L + M++LYKT+ +NP  GC P+LLQIPVF A+Y+ +  ++E+RHA     
Sbjct: 403 KYGD-DRQKLNEEMMRLYKTYKVNPAGGCLPMLLQIPVFIALYQALLGAIELRHAAFITH 461

Query: 457 ---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
                  W+ DL+A DP                     + PI+M  +MF+Q KM+P P D
Sbjct: 462 VPFTDIIWLADLSAKDPLY-------------------VTPIVMGATMFLQQKMTPTPGD 502

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
             QA ++ +MP++F F   SFPAGL++YW  +NV+SI QQ ++ + 
Sbjct: 503 STQAKVMMFMPLIFTFIFLSFPAGLVVYWLVNNVLSIAQQWMLTRK 548


>gi|332308616|ref|YP_004436467.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175945|gb|AEE25199.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 543

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 139/568 (24%), Positives = 252/568 (44%), Gaps = 35/568 (6%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME   ++ + I L   S ++   WQ  Y    ++ + +++         N          
Sbjct: 1   MESQRSFLL-IGLAMVSFLLWQQWQVDYGPQPVQPVESQQTTGSDAPSGNGDVPIATPNN 59

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
            +           + +   +L  SIN  G      NL  Y L+  S     +LL PS   
Sbjct: 60  QNALPSQSVAGKVISVTTDTLQLSINTVGGDVISANLLKYPLEQGS-EGTYSLLRPSGPT 118

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
             + A+   V T    +           S  +   T  + L +   + ++  +    +++
Sbjct: 119 -IFVAQSGLVGTNGIDKTARPTYSVAQDSYIMQGDTLTVPLTYTAKSGLIVTKEFIFNKN 177

Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            +  K+   V N S D       G++ +       + F       A   +    E+   D
Sbjct: 178 SHDVKVNYHVENTSSDVKSVKQFGQLKQSTADQGGSMFMPTYRGGAFSTEDERYEKYSFD 237

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
             +    N      W  + + Y+ S ++P ++ +     K   +G+A          + I
Sbjct: 238 DMQDKNLNQTTPAGWAAMIEHYFVSAWVPPQDQTNSLYSKMTQNGNA--IIGVVGQSVDI 295

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
            PG+S+   + L+ G K+  T+    +       ++ +D+G+ ++I++P+F  + + ++L
Sbjct: 296 EPGQSVDIQSSLYLGPKDQDTLKQIAR-----GLDLTVDYGFLWWISQPLFTFLQFIHSL 350

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           VGN+G +I+L T+ VK   +PL K QY S A M+ ++PK+D L+E++     Q +Q+AM+
Sbjct: 351 VGNWGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDK-QKMQQAMM 409

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           ++YK   +NP+ GC+P+LLQ+P+F A+Y V+  S+E+RHA F  WI DL+  DP      
Sbjct: 410 EMYKKDKVNPMGGCFPLLLQMPIFLALYWVLLESVELRHADFIFWITDLSVKDPYF---- 465

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFP 535
                          + PI+  LSM++  K+ P    D  Q  I+ +MPV        FP
Sbjct: 466 ---------------VLPILTGLSMYLLQKLQPMTMTDPMQQKIMQFMPVAMSLFFFIFP 510

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           AGL++YW  SN+I+++Q  +I       
Sbjct: 511 AGLVLYWLISNIITLIQAKIIYASMEKR 538


>gi|317165572|gb|ADV09113.1| putative inner membrane protein translocase component YidC
           [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 545

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 137/575 (23%), Positives = 234/575 (40%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q V    +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      + P V  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDEHKPFV--LFGDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +      ++L     N +  ++  +     YL
Sbjct: 104 VAQSELLDAQGNNVLKGIGFTAPQKQYSLEGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   + N S      S   RI+R   +     +        +    + +  +  +SD+
Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +                      
Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCVAGDCSIDIKRRNDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A  S     I  G    T   L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLY    INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|332702558|ref|ZP_08422646.1| Membrane protein oxaA [Desulfovibrio africanus str. Walvis Bay]
 gi|332552707|gb|EGJ49751.1| Membrane protein oxaA [Desulfovibrio africanus str. Walvis Bay]
          Length = 530

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 135/566 (23%), Positives = 226/566 (39%), Gaps = 45/566 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             N    +A  LS+ I+  W  F+   +  E               Q      A+     
Sbjct: 1   MENKRLLLATVLSLAILVGWSYFFAPEQPVEQAQAPAPQAQPAPQPQSAQPLEAIPGA-- 58

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
           A   +    V ++ P     +   G       L+ Y   +   +  + L+S    +    
Sbjct: 59  AFTSASGKIVTVETPLYTAKLFADGGVLQHFILKNYKTGIEPGAANIDLVSRQAQEK--- 115

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181
           A L  +          S +            T  +  V   A   L        ++Y  +
Sbjct: 116 APLGLIWNGAPTWNRGSWSFEGSDLTLSDDQTGQLSFVCDIAGARLVRTLTFRADNYTVQ 175

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
               V N +  Q+       +         +++          G     E +    + + 
Sbjct: 176 DSVRVANQTQAQLSGRLAFTLAGTTLSAEGDSYNPTRVEYLAEGGL---ESESDTDDLAK 232

Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301
              F     W G+   Y+     P  E +              Y+     ++I + PG  
Sbjct: 233 GLTFTGQVRWGGLLSNYFLLAIAPQTEPATFKALYSDQ----LYRIAVEKSDILLDPGSE 288

Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361
            +     F G K    +     +         I +GWF  IAKP+ + + + Y+   N+G
Sbjct: 289 ASVAADYFLGPKVRELLAAAPAE-----LSRSISYGWFSVIAKPLVLALDWLYSFTHNWG 343

Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421
           +AI+L TVF+KL+F+PL++K Y S   MK +QP + ++REK      Q+  + M+QLY+T
Sbjct: 344 VAIILLTVFIKLVFWPLSQKSYKSMNQMKKLQPMMAKIREKHADDRVQM-NQEMMQLYRT 402

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIKDLAAADPTNI 473
           + +NP+ GC P++LQIPVF  +Y  +  ++E+RHA F          W+ DL+A DP   
Sbjct: 403 YKVNPMGGCLPMVLQIPVFLGLYNALMGAIELRHAAFIEHLPFTNYIWLADLSAKDPFY- 461

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533
                             I P+IM  +MF+Q K++P   D  Q  I+ +MP++F F   +
Sbjct: 462 ------------------ITPLIMGATMFLQQKLTPAAGDPTQQKIMMFMPLIFTFMFLN 503

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKM 559
           FPAGL++YW  +NV+SI QQ  +M+ 
Sbjct: 504 FPAGLVLYWLVNNVLSIAQQWWLMRK 529


>gi|95929982|ref|ZP_01312722.1| 60 kDa inner membrane insertion protein [Desulfuromonas acetoxidans
           DSM 684]
 gi|95133951|gb|EAT15610.1| 60 kDa inner membrane insertion protein [Desulfuromonas acetoxidans
           DSM 684]
          Length = 527

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 154/563 (27%), Positives = 270/563 (47%), Gaps = 43/563 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVY---PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
             N N  VA+ L +I+   +   +        +     +   +++KQ   VD      + 
Sbjct: 1   MENKNTLVALILMLIVWTGFTFLFPPSENQSPDSEVTAKAEDKSLKQDISVDAQTVVDIQ 60

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           ++ +   +    +  +N     +I++  +   DL L+ Y  D+ ++S +V+LL  S+   
Sbjct: 61  NNISNVKTSDRFITFENDVFEATISVSTSTLVDLKLKDYKRDIDNDSDLVSLLDKSDD-- 118

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN--ANNILFERTISLDE 176
                L Y    +  +L N+     +    +      +++ F +   N  + +R I    
Sbjct: 119 --IKSLVYYGNNDFSQLSNALFNTKITDDHVFVSQDSLQVDFYSTVDNFEINKRYIFYKN 176

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            Y F IV ++ N S D    +    +     +          G +    D  L      D
Sbjct: 177 KYDFDIVYSLKNISSDSRNGNVVLSLSNFWSEDIKGNRLEFVGPVYFSDD-ELNTIDVED 235

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
           I        + + +W G  +KY+ S  I + + S       +   +   Q    + ++TI
Sbjct: 236 INND----VYSNIAWSGFENKYFFSALIGNDKFSNLL----VKHQNNYVQTNLISTDLTI 287

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
             G+ +     +F G K+   +   + +        ++D+G+F  +AKP+  ++++FY  
Sbjct: 288 SNGQQLDFKTKVFYGPKDVQILKGVDDN-----LVRVVDYGFFKILAKPLHTVLNFFYGY 342

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           +GN+G +I+L TV +K+LF+PL +K YVS   M+ IQP++ +LREK+     + L + M+
Sbjct: 343 IGNYGFSIILLTVIIKMLFWPLTQKSYVSMKAMQKIQPEMKKLREKYGN-DRESLNRKMM 401

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LY+ H +NPL GC P+L+QIPVFFA+YKV+  ++E+RHAPF  WI DL+  DP      
Sbjct: 402 ELYREHRVNPLGGCLPMLVQIPVFFALYKVLLGTIELRHAPFIFWITDLSVKDPYY---- 457

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536
                          I P++M L+MFIQ K++P   D  QA ++  MPVVF F   +FPA
Sbjct: 458 ---------------ITPLVMGLTMFIQQKLTPNTMDPMQAKMMLAMPVVFTFLFLNFPA 502

Query: 537 GLIIYWSWSNVISIVQQAVIMKM 559
           GL++YW  +N+++I QQ +I K 
Sbjct: 503 GLVVYWLVNNLLTIFQQYLIYKK 525


>gi|326625577|gb|EGE31922.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 531

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 136/554 (24%), Positives = 244/554 (44%), Gaps = 52/554 (9%)

Query: 19  YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78
             WQ +           ++      +Q  Q   + A    D    A      + +K   L
Sbjct: 1   MIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQGVPASGQGKMITVKTDVL 51

Query: 79  IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138
             +IN +G   +   L  Y  ++ SN P   L   +  +  Y A+             N 
Sbjct: 52  DLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIYQAQSGLTGRDGPDNPANG 109

Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192
                 +  +            + + + +A    F +T       Y   +  +V N    
Sbjct: 110 PRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFVFKRGDYAVNVNYSVQNTGEK 169

Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245
            +  S  G++ +         T ++ F +     A          + K+  I  +   N 
Sbjct: 170 PLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNV 229

Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305
                W+ +  +Y+A+ +IP  + + +  F   + G+      + A  + + PG++   T
Sbjct: 230 SSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAIGYKAQPVLVQPGQTGAMT 287

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           + L+ G +    +         P  ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+
Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
           + T  V+ + +PL K QY S A M+ +QPKI  +RE+      Q   + M+ LYK   +N
Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRQSQEMMALYKAEKVN 401

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           PL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A DP               
Sbjct: 402 PLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSAQDPYY------------- 448

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
                 I PI+M ++MF   KMSP    D  Q  I+ +MPV+F      FP+GL++Y+  
Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502

Query: 545 SNVISIVQQAVIMK 558
           SN+++I+QQ +I +
Sbjct: 503 SNLVTIIQQQLIYR 516


>gi|239818257|ref|YP_002947167.1| 60 kDa inner membrane insertion protein [Variovorax paradoxus S110]
 gi|239804834|gb|ACS21901.1| 60 kDa inner membrane insertion protein [Variovorax paradoxus S110]
          Length = 565

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 150/588 (25%), Positives = 248/588 (42%), Gaps = 53/588 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVK------------QP 46
           M       + +     +V  W  +  +   +   + + +                    P
Sbjct: 1   MNDIRRTILWVIFGFSLVLLWDQWQVFNGNKPTFLPSSKPAAVASAPAGAAAPAAGNGVP 60

Query: 47  NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
           +    + +A  +  +A A +   +V +        I+ +GA  + L L  Y    +  + 
Sbjct: 61  SASAATGSAGAVPTQAAAAAPREQVNVTTDLFKAVIDSEGATVNYLELLKYDE--ADRTK 118

Query: 107 IVTLLSPSNTKNAYFAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLV-----F 160
            V L   ++    Y A+   ++   +    PN  T     +G          L       
Sbjct: 119 HVVLFENASPATRYVAQTGLLNPVDSGERFPNHLTPMAPKAGPREMAEGQNTLEVSFESA 178

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF--GVQE 218
                   +  +     Y   +   V N S          +++RH    A   F      
Sbjct: 179 PVGGLKYVKTYVFKRGDYAIGVRHEVVNVSDQPRDAQLYMQLLRHGTVAAGTMFGTNTFT 238

Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKE---TSFHSQ 274
           G  A   +K   +  + DI K  I      ++ W+ +   Y+AS ++   +        +
Sbjct: 239 GPAAYTNEKKFHKLDFKDIAKGKIEPPPPANDGWIAMVQHYFASAWLLKGDPASEQLRRE 298

Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
           F+    G   Y     A    I PG +    + LFAG +E   +         P  +++ 
Sbjct: 299 FRVKDLGDNLYTVAMVATLPKIAPGATQVVNSALFAGPEEEKKLEAIA-----PGLDLVK 353

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           D+G F  I+KP++ L++  + ++GN+G AI+   V +K  F+ L  K Y S A MK I P
Sbjct: 354 DYGIFAIISKPLYWLLTQLHGILGNWGWAIVALVVLLKAAFYWLNAKAYASMAKMKAINP 413

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           KI E+RE+ K   PQ +Q+ M+++YKT  +NP+ GC+PI++QIPVF A+Y V+  S+EMR
Sbjct: 414 KIMEMRERLKD-KPQEMQQEMMRIYKTEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMR 472

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
           HAP+ GWI DL+A DP                     I P++M+L+   Q  ++P P D 
Sbjct: 473 HAPWIGWITDLSAPDPWY-------------------ILPVVMTLTSLFQTWLNPTPPDP 513

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            QA ++  MP+ F      FPAGL++YW  +NV+SI QQ  I K  G 
Sbjct: 514 MQAKLMWIMPLAFSVMFIFFPAGLVLYWITNNVLSIAQQWFINKRLGV 561


>gi|300705597|ref|YP_003747200.1| cytoplasmic insertase, essential for proper integration of ATPase
           into the membrane [Ralstonia solanacearum CFBP2957]
 gi|299073261|emb|CBJ44620.1| cytoplasmic insertase, essential for proper integration of ATPase
           into the membrane [Ralstonia solanacearum CFBP2957]
          Length = 554

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 147/579 (25%), Positives = 245/579 (42%), Gaps = 52/579 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM----------------NNERKNIQTVK 44
           M+      + +  S+ +V  + N+      + M                     ++    
Sbjct: 1   MDI-KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGGTPAGDVPKSA 59

Query: 45  QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                  S AA      +QAL+ S ++ +    +  +++  GA    L L         +
Sbjct: 60  ATPAAAGSQAAPATGAASQALA-SEKIVVTTDVIRATVDTAGASLTKLELL----TQKDH 114

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
                +L   + +  Y A    +   +                        + L      
Sbjct: 115 DGNPMVLFDRSLERTYLARSGLIG-GDFPNHTTVFAASTGPRDLGTGGEVSLTLTADKGG 173

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAV 223
             L +  +     Y+      VTN+    I  +    + R       +  +    G    
Sbjct: 174 AKLAKTYVFKRGSYVIDTRFDVTNDGTAPINPTLYMELARDGGAVEQSRFYSTFTGPAVY 233

Query: 224 LGDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                  +  ++DI+K          + W+ +   Y+AS +IP+           +    
Sbjct: 234 TDTDHYHKITFADIDKGKAQVPGATDSGWVAMVQHYFASAWIPAASVKREYYVDRVDTNF 293

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             Y+        T+ PG S++ T  LFAG +E   +         P  +++ D+GW   I
Sbjct: 294 --YRIGIQEPLGTVAPGASLSATARLFAGPQEARMLEGIT-----PGLDLVKDYGWLTVI 346

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           AKP+F L+   + L+GN+G +I+  TV +KL+FFPL+   Y S A MK++QP++  +RE+
Sbjct: 347 AKPLFWLLEKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRER 406

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
            K   PQ + + M+ LY+T  +NPL GC PIL+QIPVF A+Y  +  S+EMR AP+ GW+
Sbjct: 407 HKG-DPQKMNQEMMTLYRTEKVNPLGGCLPILIQIPVFMALYWALLSSVEMRGAPWLGWV 465

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DLA+ DP                     I PI+M++SMF+Q K++P P D  QA ++ +
Sbjct: 466 HDLASPDPFY-------------------ILPILMAVSMFVQTKLNPTPPDPVQAKMMMF 506

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           MP+ F      FPAGL++YW  +N +SI QQ  I +M G
Sbjct: 507 MPLAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 545


>gi|126208888|ref|YP_001054113.1| putative inner membrane protein translocase component YidC
           [Actinobacillus pleuropneumoniae L20]
 gi|126097680|gb|ABN74508.1| inner membrane protein OxaA [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 493

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 131/512 (25%), Positives = 239/512 (46%), Gaps = 29/512 (5%)

Query: 53  YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
            A+      A+  +    V L++  L  +I+  G      +L  ++ +++S +P   L +
Sbjct: 3   AASNANTVIAENATQGKTVTLESDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQT 62

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
            + T  A    +       N   P      +            + + F+    +  +  +
Sbjct: 63  GATTYVAQSGLVGKNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFV 122

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
                Y   +   V N +   +   P G+I     +++ +         A    ++  ++
Sbjct: 123 LKRGSYDVAVNFNVKNQTAATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKK 182

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
                 + +  + +    W+ +   Y+ S ++P+++       +  +         +   
Sbjct: 183 YSFQDMEKANLDINTKAGWVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGP 239

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
             TI P    T T+ L+ G K+   +     +      ++ +D+GW +FIAKP+F L+++
Sbjct: 240 VTTIAPNSEATITSQLWTGPKDQKEMEATAAN-----LDLTVDYGWAWFIAKPLFALLTF 294

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
             ++V N+G+AI+  T+ VK + +PL K QY S A M+ +QPKI E+RE+F     Q + 
Sbjct: 295 IQSIVTNWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMS 353

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           + M++LYK   +NP+ GC PIL+Q+P+F A+Y     ++E+RHAPF+GWI+DL+A DP  
Sbjct: 354 QEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY 413

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531
                              I P++M  SMF+  KMSP P  D  Q  ++ +MPV+F    
Sbjct: 414 -------------------ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFF 454

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             FP+GL++YW  SN+I+IVQQ +I +    +
Sbjct: 455 LWFPSGLVLYWLTSNIITIVQQWLIYRNLEKK 486


>gi|242278540|ref|YP_002990669.1| hypothetical protein Desal_1066 [Desulfovibrio salexigens DSM 2638]
 gi|259515640|sp|C6C0J6|OXAA_DESAD RecName: Full=Inner membrane protein oxaA
 gi|242121434|gb|ACS79130.1| 60 kDa inner membrane insertion protein [Desulfovibrio salexigens
           DSM 2638]
          Length = 539

 Score =  321 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 137/571 (23%), Positives = 229/571 (40%), Gaps = 50/571 (8%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM----NNERKNIQTVKQPNQVDNSYAAVL 57
             N    +A+ALS  ++  WQ  +     +          +  Q V        S     
Sbjct: 1   MDNKRVILAVALSFAVLLGWQFLFPPQPQQPAPAQQEQTAQPNQAVDSSVAGPVSNQLPD 60

Query: 58  IDDRAQ-ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
               +    +   R+ ++ P     IN +G   +   L+ +   + ++SP V ++     
Sbjct: 61  PASTSAIVSAKGTRLTVETPLYSAVINSQGGLLESFKLKKFKATIDADSPDVDMV----G 116

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD- 175
            NA       +         N    +   +  +        +   +      ER ++   
Sbjct: 117 TNALDKAPMGLILNGIATWANGVWGYEGANLNLEGDKLGTLIFRGDVEGFRIERRLTFHA 176

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
           ++YL      V N S                   A + +      IA    + LVE+   
Sbjct: 177 DNYLIDEDVRVINKSNPSGMGRIAFTTATKSLTAADDRYNP--TRIAWFNAEGLVEESDR 234

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D    +         W  I   Y+    +P  ++                    +   ++
Sbjct: 235 DTLSETGVTESGKVEWAAIDSNYFILALVPGADS-----VTMKGKLQDDIFRIAAEQNVS 289

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
                        + G  +   +     +         ID+GWF  IAKP+ + + +F+ 
Sbjct: 290 FDKDIERKLACSYYFGPMDAQLMAKVPGE-----LSKAIDFGWFDIIAKPLVVALEWFHQ 344

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
              N+GIAI+L T+ +K+LF+PL+ K Y S   MK +QP + +LREK      + L K M
Sbjct: 345 YTNNYGIAIILLTIVIKILFWPLSHKSYKSMEQMKRLQPMMAKLREKHGD-DREALNKEM 403

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA--------PFWGWIKDLAA 467
           +QLYKT+N+NP  GC P+LLQIPVFF +YK +  ++ +RHA            W+ DL+A
Sbjct: 404 MQLYKTYNVNPAGGCLPMLLQIPVFFGLYKALMGTVALRHADFVHFLPFTDIVWLADLSA 463

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527
            DP                     I PI+M  +MF+Q KM+P   D  Q  I+ ++P+VF
Sbjct: 464 KDPLY-------------------ITPIVMGATMFLQQKMTPSAGDPTQQKIMMFLPLVF 504

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            F   +FP+GL++YW  +NV+SI QQ ++M+
Sbjct: 505 TFMFLNFPSGLVVYWMVNNVLSIAQQWMMMR 535


>gi|161869308|ref|YP_001598475.1| putative inner membrane protein translocase component YidC
           [Neisseria meningitidis 053442]
 gi|189036354|sp|A9M152|OXAA_NEIM0 RecName: Full=Inner membrane protein oxaA
 gi|161594861|gb|ABX72521.1| preprotein translocase YidC subunit [Neisseria meningitidis 053442]
 gi|308390001|gb|ADO32321.1| putative inner membrane protein translocase component YidC
           [Neisseria meningitidis alpha710]
 gi|319409783|emb|CBY90091.1| inner-membrane protein OxaA [Neisseria meningitidis WUE 2594]
 gi|325129442|gb|EGC52272.1| inner membrane protein OxaA [Neisseria meningitidis OX99.30304]
 gi|325135498|gb|EGC58116.1| inner membrane protein OxaA [Neisseria meningitidis M0579]
 gi|325201458|gb|ADY96912.1| inner membrane protein OxaA [Neisseria meningitidis M01-240149]
 gi|325207439|gb|ADZ02891.1| inner membrane protein OxaA [Neisseria meningitidis NZ-05/33]
          Length = 545

 Score =  321 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 134/575 (23%), Positives = 233/575 (40%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q V    +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQTAQQQAVTASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      N P +  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +      ++L       +  ++  +     YL
Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   + N S      S   RI+R   +     +        +    + +  +  +SD+
Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +           +          
Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y    S     I  G     +  L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLY    INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|238797847|ref|ZP_04641339.1| Inner membrane protein oxaA [Yersinia mollaretii ATCC 43969]
 gi|238718263|gb|EEQ10087.1| Inner membrane protein oxaA [Yersinia mollaretii ATCC 43969]
          Length = 531

 Score =  321 bits (821), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 136/556 (24%), Positives = 236/556 (42%), Gaps = 54/556 (9%)

Query: 16  IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75
           +I  AWQ         +   +  N     + +Q               A      + +K 
Sbjct: 1   MIWQAWQVDNNPQSTAQTTQQTANTAPGDKASQAVP------------ASGQGQLITVKT 48

Query: 76  PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135
             L  +IN +G   +  NL  Y   + S+     L   +     Y A+      +     
Sbjct: 49  DVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFVYQAQSGLTGKSGPDNP 106

Query: 136 PNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL-FKIVDTVTNN 189
            N       +               I L F   +  +F +T  L  +     +   V N 
Sbjct: 107 ANGERPLFEVPQTSFVLADGQDELRIPLTFTGKDGSVFTKTFVLKRNDYAIGVDYHVKNA 166

Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQKY-SDIEKSSIS 243
           S   +  +  G++ +         T +N F +     A         +KY     +    
Sbjct: 167 SDAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAFSSDDTKYKKYSFSDIEDKTL 226

Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303
           +      W+ +  +Y+A+ +IP+      + F     G+      F    + I PG+   
Sbjct: 227 DITTKGGWVAMLQQYFATAWIPAANE--TNTFYSADLGNGLAAIGFKGMPVVIQPGEQKQ 284

Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363
               L+ G +    +         P  ++ +D+GW +FI++P+F L+ + ++ VGN+G +
Sbjct: 285 LGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFKLLKFIHSFVGNWGFS 339

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q + + M+ LYK   
Sbjct: 340 IIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMSQEMMALYKAEK 398

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A DP             
Sbjct: 399 VNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYY----------- 447

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
                   I PI+M ++M+   KMSP    D  Q  I+ +MPV+F      FPAGL++Y+
Sbjct: 448 --------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGLVLYY 499

Query: 543 SWSNVISIVQQAVIMK 558
             SN+++I+QQ +I +
Sbjct: 500 IVSNLVTILQQQLIYR 515


>gi|294648708|ref|ZP_06726168.1| Oxa1 family cytochrome oxidase biogenesis protein [Acinetobacter
           haemolyticus ATCC 19194]
 gi|292825383|gb|EFF84126.1| Oxa1 family cytochrome oxidase biogenesis protein [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 586

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 130/601 (21%), Positives = 245/601 (40%), Gaps = 69/601 (11%)

Query: 11  IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
              + +++ AWQ  Y +               +++ +  N Q     + +  +       
Sbjct: 14  FVTAYLLILAWQKDYGHAAPAPQQQAAVVSAHDVSADLPNAQNATAASDLPQANVTASQQ 73

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
                      + ++       IN KG     + L  +    + + P V L + +N    
Sbjct: 74  ATETTSVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDQSKNGDQPFVMLENDAN--RT 131

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK---------------LVFKNAN 164
           Y A+   +         N   ++++                            +      
Sbjct: 132 YVAQSGLIGLNGPDSSRNGRPMYDVEKTAYTMEDAKKMATTDGASSQVLTVPLVFKTPEG 191

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220
             + +        Y   +   V N S    +    G++ R             F +    
Sbjct: 192 VEVIKTFTFTQGEYPITVKHQVVNRSQQNWQGQMFGQLKRDNSDDPGKSDQGIFTLGTFL 251

Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271
               G       + K+S+     ++     N+W+ +   Y+ S +IP       +    +
Sbjct: 252 GGAWGTPDAHYNKLKFSNFSDEKLNL-DAKNAWVAMVQHYFVSAWIPGNLKLTQADGQPY 310

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            ++ +            F++  I +  G S+      ++G K    +             
Sbjct: 311 TAKLESRQSADKMNIIGFTSPTINVPAGTSMEVDAKFYSGPKIQSELKDLAV-----GLN 365

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+GW + IAK +F+ + +F+N+VGN+G +I+L T+ VKL+ +PL+ K Y S A M+ 
Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHNIVGNWGWSIILLTILVKLILWPLSSKSYRSMAKMRV 425

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           I P++  ++E+F         + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+
Sbjct: 426 IAPEMQRMKEEFGD-DRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+RHAP+  WI+DL+A DP                     I P++M ++M++Q  ++P P
Sbjct: 485 ELRHAPWLLWIQDLSAMDPWF-------------------ILPLLMGVTMYVQQMLNPQP 525

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
            D  QA +   MP++F   +  FPAGL++YW  +N I+I+QQ+ I K    E   ++++ 
Sbjct: 526 TDPMQAKVFRLMPIIFTVFMLFFPAGLVLYWIVNNAITILQQSFINKS--VEKDRLNKIE 583

Query: 572 S 572
           S
Sbjct: 584 S 584


>gi|171061052|ref|YP_001793401.1| 60 kDa inner membrane insertion protein [Leptothrix cholodnii SP-6]
 gi|170778497|gb|ACB36636.1| 60 kDa inner membrane insertion protein [Leptothrix cholodnii SP-6]
          Length = 559

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 140/585 (23%), Positives = 241/585 (41%), Gaps = 53/585 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF--------YVYPRIEEMNNERKNIQTVKQPNQVDNS 52
           M       +    S+ +V  W  +           P+    +       T   P    ++
Sbjct: 1   MTDLRRALLWGVFSISLVMLWDGWSRHTGQPSMFDPKPAARSVPLAANGTSSVPVPAASA 60

Query: 53  YAAVLIDDRAQALSMSPRVE----LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
            A   +   + A + +        L    +  + + +G     + L  Y  D SS S  V
Sbjct: 61  AAGAALPVASSASAAAVSAAEKVVLTTDVVKATFDSRGGTLVSIELLKY-ADPSSASGHV 119

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----A 163
            L    + +  Y AE   + T     LP+  T+ N+++G         +L  +       
Sbjct: 120 MLF-DQSPQRHYMAESGLIGTGQPGTLPDHTTLMNVVAGDRTLGDGKSELQARFESTAAD 178

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ--TATNTFGVQEGFI 221
              L +        Y+  +   V N     +      +++R       A++ +    G  
Sbjct: 179 GVKLVKTYTLRRGDYVIDVQHEVLNQGAAAVSPQLYLQLVRDGNPLPDASSFYSTFTGPA 238

Query: 222 AVLGDKSLVEQKYSDIEKSS-----ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
                    + ++SDIEK              + W+ +   Y+A+ ++P  +       +
Sbjct: 239 VYSEAGKFQKIEFSDIEKRKAGDKVDHVTSAEDGWVAMVQHYFAAAWLPGDKVQREFFSR 298

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
            +SD    Y          + P  S      LF G +E   I         P  +++ D+
Sbjct: 299 KVSDN--LYAVGMLLPVGEVAPAASRKIDARLFVGPQEEKRIEALA-----PGLDLVKDY 351

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           GW   ++KP+F L+   ++ +GN+G AI+   V +K  F+ L    Y S   MK I PK+
Sbjct: 352 GWLTILSKPLFWLLHKLHSYIGNWGWAIVALVVLLKAAFYWLNASAYRSMGKMKAINPKV 411

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
            ELRE+ K   PQ +Q+ M+++Y+   +NPL GC PI +Q+P F A+Y V+  S+EMR A
Sbjct: 412 QELRERLKD-KPQQMQQEMMRIYREEKVNPLGGCLPIFVQMPFFIALYWVLLSSVEMRGA 470

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+ GW+ DL+  DP                     I P++M+ +  +Q  ++P P D  Q
Sbjct: 471 PWVGWVHDLSVKDPYF-------------------ILPLLMTATTVLQTWLNPTPPDPIQ 511

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           A ++  MP+ F      FPAGL++YW  +N++SI QQ +I +  G
Sbjct: 512 AKMMWIMPLAFSVMFFFFPAGLVLYWFTNNLLSIAQQWMINRQLG 556


>gi|257455161|ref|ZP_05620399.1| inner membrane protein OxaA [Enhydrobacter aerosaccus SK60]
 gi|257447494|gb|EEV22499.1| inner membrane protein OxaA [Enhydrobacter aerosaccus SK60]
          Length = 563

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 121/571 (21%), Positives = 234/571 (40%), Gaps = 49/571 (8%)

Query: 7   YFVAIALS-VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV--------- 56
             +A+ ++  +++ AW++ Y                +         S             
Sbjct: 9   IIIAMLITGYLLILAWRDDYTNVNKPVAITPTTTAVSSNDVPVAGTSSTPTGDVPTATAT 68

Query: 57  -LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
                     + +  + +        IN  G       LR     + S  P V L    +
Sbjct: 69  TPTAAPTTQKTGAQLISVMTDKYDIRINPVGGDVVYAALREQTQTLDSKQPFVLL--EED 126

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTI 172
           +   Y A+   +            T     +  ++ P        L ++     + +   
Sbjct: 127 SNRVYVAQSGLIGANGIDNSNGRATFTAPSNQFVMQPNQAELVVPLTYQKDGVTIIKSYK 186

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKS 228
                Y   +   +TNN     +     ++ R   +           +        G   
Sbjct: 187 FTKGQYPINVSYNITNNGTQPWQGQMYAQLKRDNSEDPGKGDKGAISLSTYLGGAWGTPD 246

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
               K      +          W+G+   Y+ + ++P     + + F     G   +   
Sbjct: 247 QPYNKLKFGNFNDGLKASSDKGWIGMVQHYFVTAWMPKD---YTAYFYSREAGKD-HIIG 302

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
           F++N +++ P K +T T+ L+AG K    +    +       +  +D+G  + I+K +F 
Sbjct: 303 FTSNPVSVAPNKQVTLTSALYAGPKIQTNLKPLAE-----GLDKTVDYGILWPISKVLFW 357

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           ++   + ++GN+G +I++ T+ VK+   P+A K Y S A M+ + P++  L+E++     
Sbjct: 358 ILDNVHKVLGNWGWSIIVLTLLVKIALMPIANKSYHSMAKMRAVAPRLQALKEEYGD-DR 416

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             + + M+++YK   +NP+AGC P+LLQ+P+F A+Y V+  S+++RHAP+ GWI+DL++ 
Sbjct: 417 MRMSQEMMRIYKEEKVNPMAGCLPVLLQMPIFLALYWVLVESVQLRHAPWIGWIRDLSSM 476

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP                     I P+IM  +MF Q  ++P P D  QA ++ +MP++F 
Sbjct: 477 DPLF-------------------ILPLIMGAAMFFQQMLNPQPQDPMQARVMKFMPIIFT 517

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
             +  FPAGL++YW+ +N+ S+ QQ  I K 
Sbjct: 518 VFMLFFPAGLVLYWTVNNLFSMAQQYFINKK 548


>gi|153873748|ref|ZP_02002226.1| 60Kd inner membrane protein [Beggiatoa sp. PS]
 gi|152069784|gb|EDN67772.1| 60Kd inner membrane protein [Beggiatoa sp. PS]
          Length = 495

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 136/500 (27%), Positives = 225/500 (45%), Gaps = 31/500 (6%)

Query: 65  LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124
           LS   R+ ++       I+  G     ++L  Y +          L++            
Sbjct: 12  LSSDSRLYVETDVFKLEIDTSGGDIRRVDLLQYPVAADKPDEPFRLMNEELPNLFVAQSG 71

Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFKIV 183
              +      L    +  +    +    +  IKL ++N   I   +  +     Y+  + 
Sbjct: 72  LLPAQNAPTHLALYQSEQSSYRLEPGNDSLDIKLHWQNDKGIKVTKIYTFHRGSYVIDVK 131

Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE----QKYSDIEK 239
             V N S++       G+  R +     + F       A+   ++L E        D   
Sbjct: 132 YLVDNQSVEPWAGQLYGQFQRTQADLGGSRFIYTYMGGAISSPETLYEKIPFDDIEDSSF 191

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
           +  +    +  W+ +   Y+ S ++P  E       K L DG  RY   F   +  + PG
Sbjct: 192 NQENRPAWAEGWIAMLQHYFVSAWVPKPEQIHKYYTKMLKDG-NRYVLGFYGPKQVVAPG 250

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359
                   LF G K    +         P  ++ +D+GW +FIA+P+F ++ + ++  GN
Sbjct: 251 TQEIFNIALFVGPKLQNKLLELA-----PGLDLTVDYGWLWFIAQPLFWVLDWLHDWTGN 305

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +G +I+L T+ +KL FF L+   Y S ANM+ +QP++  L+E+F     + L +AM++LY
Sbjct: 306 WGWSIILLTIMIKLAFFHLSATSYKSMANMRRLQPRMITLKERFGDDKTK-LNQAMMELY 364

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           K   INPL GC PIL+QIPVF A+Y V+  S+E+R A F  WIKDL++ DP         
Sbjct: 365 KKEKINPLGGCLPILVQIPVFIALYWVLLESVELRQADFMWWIKDLSSPDPFF------- 417

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539
                       + P+IM  +M +Q  ++P P D  Q  ++  +P+VF    + FPAGL+
Sbjct: 418 ------------VLPLIMGATMLVQHFLNPAPIDPIQQKMMMMLPIVFTVFFAFFPAGLV 465

Query: 540 IYWSWSNVISIVQQAVIMKM 559
           +YW  +NV+SI QQ VI K 
Sbjct: 466 LYWVANNVLSITQQWVITKK 485


>gi|254804276|ref|YP_003082497.1| inner membrane protein OxaA [Neisseria meningitidis alpha14]
 gi|254667818|emb|CBA03804.1| inner membrane protein OxaA [Neisseria meningitidis alpha14]
          Length = 545

 Score =  320 bits (820), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 136/575 (23%), Positives = 233/575 (40%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q V    +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      N P +  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +      ++L       +  ++  +     YL
Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   + N S      S   RI+R   +     +        +    + +  +  +SD+
Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +                      
Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGECSIDIKRRNDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A  S     I  G    T   L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLY    INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|332976008|gb|EGK12879.1| YidC/Oxa1 family membrane protein insertase [Psychrobacter sp.
           1501(2011)]
          Length = 572

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 130/590 (22%), Positives = 238/590 (40%), Gaps = 63/590 (10%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M++     + IA+   + ++V AWQ  Y        +    ++ T      +  S     
Sbjct: 1   MQKILRVLIIIAMLITAYLLVLAWQKDYANVPATSADAVTPSVSTSTTGADIPTSTGTGT 60

Query: 58  IDDRAQALS------------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99
            D  A   S                      + +        I+  G       LR Y+ 
Sbjct: 61  SDIPAATASATTDVPSSEVGGENTNAKQGALINVTTDRYQIKIDPVGGDVVYAALRNYNA 120

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI--- 156
            + S +P V L   ++ +  Y A+   +                     ++ P       
Sbjct: 121 TLDSKNPFVLL--ENSGQRVYVAQSGLIGPNGIDTPAGRAKYSYQSDNYVMQPGQKKLEV 178

Query: 157 KLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN--- 212
            L +K  + +   +T +  +  Y   +   + N S          ++ R   +       
Sbjct: 179 PLTYKQEDGVTITKTFTFTEGKYPISVNYNINNTSGKAWNGQLFAQLKRDSSKDPGMADK 238

Query: 213 ---TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269
              +     G      D    + K+ D     +        W+GI   Y+ S + P    
Sbjct: 239 GAISMATYLGGAWGTPDDDYNKLKFKDFNDGDLKA-ASDKGWVGIVQHYFVSAWTP---Q 294

Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329
           +F  QF         +    ++ +  +   K    T  L+AG K+  ++         P 
Sbjct: 295 NFTGQFFSREKAGDHF-IGMNSEQFMVPAAKQKDITATLYAGPKDQDSLLEVA-----PG 348

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
               +D+G+ + I+K +F ++   + ++GN+G +I+  T+ VKL     + K Y S A M
Sbjct: 349 LNKTVDYGFLWPISKVLFAVLEGIHKVIGNWGWSIIALTLLVKLALMWFSNKSYYSMAKM 408

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + I P++  L+E+      ++  + M+ +YK   +NP+AGC PILLQ+P+F A+Y V+  
Sbjct: 409 RAIAPRLQALKEEHGDDRMKM-SQEMMAIYKEEQVNPMAGCLPILLQMPIFLALYWVLVE 467

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S+E+RHAP+  WI+DL++ DP                     I P++M  SMF Q   SP
Sbjct: 468 SIELRHAPWILWIQDLSSMDPWF-------------------ILPMLMGASMFAQQMFSP 508

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            P D  QA ++ ++P++F   +  FPAGL++YW+ +N+ ++ QQ ++ K 
Sbjct: 509 QPTDPMQAKVMRFLPIIFTLFMLFFPAGLVLYWTVNNLFTMAQQYIVNKK 558


>gi|257095987|ref|YP_003169628.1| 60 kDa inner membrane insertion protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257048511|gb|ACV37699.1| 60 kDa inner membrane insertion protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 560

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 133/554 (24%), Positives = 227/554 (40%), Gaps = 37/554 (6%)

Query: 19  YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL---SMSPRVELKN 75
             W  +  Y + +       +      P    N +A + +     A+     +    +K 
Sbjct: 18  MLWDAWQKYNQPKPAATAAVSTPQAPAPQLSTNLHAPLPVLPDTAAVRAPDKAETFTVKT 77

Query: 76  PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135
              +  I+  G     L L  Y    +              K+ Y A+   +        
Sbjct: 78  DLFVAHISRIGGDIVRLELNDYKDSTNKQKDFALF----EAKHQYVAQSGLIGEGLPNHK 133

Query: 136 PNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQI 194
            + + V           T  ++L       +   +T +     YL  +   + N S  ++
Sbjct: 134 TSFSAVAGSAELGADAKTVVLRLEAPAGGGLKVAKTYTFTRGSYLIDVAHEIDNGSDKEV 193

Query: 195 RFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN-FHESNSW 251
                 ++ R    P   ++      G           +  ++DIEK          + W
Sbjct: 194 LAHAYYQLQRDTKAPDGESSMVSTYTGPAVYTNQDKYQKVDFADIEKGKAKFATRADDGW 253

Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ-AKFSANEITILPGKSITTTNFLFA 310
           + +   Y+ + +IP+         + L  G                 PG  +T +  ++A
Sbjct: 254 IAMVQHYFVAAWIPATGLPREFYMRKLEGGVNPAVAVGVIVPAPVAAPGAKVTFSVPVYA 313

Query: 311 GAKEFPTIHHYEK-----DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           G +   T+    K      +      +++D+GW   +A P+F  +   + +VGN+G AI+
Sbjct: 314 GPQIQATLEQLAKPEADGGIGAQGLPLVVDYGWLTIVAAPIFWCLEAIHTVVGNWGWAIV 373

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
           L T+ +KLLFFPL+   Y S A M+ + P++  L+E++     Q L + M+ LYK   IN
Sbjct: 374 LLTIGIKLLFFPLSAASYKSMAKMRTVTPRLMALKERYGD-DRQKLNQEMMALYKREKIN 432

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           PL GC PI +QIPVF A+Y  +  ++E+R AP+  WI DL+A DP               
Sbjct: 433 PLGGCLPIAVQIPVFIALYWALLGAVEIRDAPWILWITDLSAQDPYY------------- 479

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
                 + P+IM ++M IQ K++P P D  QA ++  MP +F      FPAGL++YW  +
Sbjct: 480 ------VLPVIMVVTMLIQTKLNPTPPDPIQAKVMMMMPFIFGAMFFFFPAGLVLYWVVN 533

Query: 546 NVISIVQQAVIMKM 559
           NV+SI QQ  I +M
Sbjct: 534 NVLSIAQQWQITRM 547


>gi|58584448|ref|YP_198021.1| putative inner membrane protein translocase component YidC
           [Wolbachia endosymbiont strain TRS of Brugia malayi]
 gi|58418764|gb|AAW70779.1| Preprotein translocase subunit YidC [Wolbachia endosymbiont strain
           TRS of Brugia malayi]
          Length = 572

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 210/577 (36%), Positives = 330/577 (57%), Gaps = 21/577 (3%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYP-RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           M    N  +A  LS++I+ +W+  Y      E+ +   +NI+ ++      N  A V+  
Sbjct: 1   MSEARNLILAAILSILIIVSWRIIYDNFLNAEQDHPLIENIEHIE----SFNDLAPVIHQ 56

Query: 60  DRAQALSM--SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
            R++ ++     R+ L N  + GSI+LKGA+FDDL L  Y L+   +SP V LLSP+ +K
Sbjct: 57  SRSEIINSTREQRINLTNNMVKGSISLKGARFDDLILTNYCLEPDPSSPQVVLLSPAESK 116

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
           + YFAE  ++      ++P+S T W       LT    + L + N N I+F   +SLD +
Sbjct: 117 DVYFAEFGWLDPNGKTKVPDSKTFWQ-AEKTELTNQKAVNLFWNNENGIVFRMKVSLDNN 175

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y+FK+   V NN+ D +   P G+I R +     + +   EG +    +  L E  Y ++
Sbjct: 176 YMFKVEQIVENNTKDNVVLVPYGKINRKRDNINESYWISHEGILGAFDN-KLEEWTYKNV 234

Query: 238 EKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEIT 295
            K  +     S  +W G +DKYW +  IP K    +   K+ + +   ++Q  F      
Sbjct: 235 AKKHLIKASTSKKNWFGFADKYWLTAIIPEKFDKTNVSIKHTNANNVDKFQVDFVKPYKN 294

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           ILPG S +  N+ FAGAK+   + +Y+  L IP F+  +D+G  YFI KP+F+L+ YF  
Sbjct: 295 ILPGTSASNVNYFFAGAKKLNLLDYYKSTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNF 354

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           ++ NFG+AI+L T+ +KLL  PL+ + YVS   MK++QP++  ++E +K    +   K  
Sbjct: 355 VLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKMKSLQPEVARIKELYKNDSLK-QHKET 413

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           I L+K +N+NP++   PIL+QIPVFFA+YKV+ +++EMRHAPF  WIKDL+ +DPTNIFT
Sbjct: 414 IALFKKNNVNPMSSILPILVQIPVFFALYKVLFVTIEMRHAPFCLWIKDLSTSDPTNIFT 473

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALS 532
           LFG+  +  P  + +GI PII+ ++M IQ K+        D  QA ++ + P + +F  S
Sbjct: 474 LFGLFNYNFP--ISIGILPIILGITMIIQQKIGEKGQTNKDDIQANVMKFFPYISIFIFS 531

Query: 533 SFPAGLIIYWSWSNVISIVQQ----AVIMKMHGAEIG 565
           SFPAGL+IYW +SNVI+++QQ      + +  G  + 
Sbjct: 532 SFPAGLVIYWIFSNVITLIQQSLIKLFLTRKLGINVE 568


>gi|226952826|ref|ZP_03823290.1| inner membrane protein (IMP) integration factor; binds TM regions
           of nascent IMPs; required for Sec-independent IMP
           integration; associated with the Sec translocase
           [Acinetobacter sp. ATCC 27244]
 gi|226836447|gb|EEH68830.1| inner membrane protein (IMP) integration factor; binds TM regions
           of nascent IMPs; required for Sec-independent IMP
           integration; associated with the Sec translocase
           [Acinetobacter sp. ATCC 27244]
          Length = 586

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 130/601 (21%), Positives = 245/601 (40%), Gaps = 69/601 (11%)

Query: 11  IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
              + +++ AWQ  Y +               +++ +  N Q     + +  +       
Sbjct: 14  FVTAYLLILAWQKDYGHAAPAPQQQAAVVSAHDVSADLPNAQNATAASDLPQANVTASQQ 73

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
                      + ++       IN KG     + L  +    + + P V L + +N    
Sbjct: 74  ATETTSVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDQSKNGDQPFVMLENDAN--RT 131

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK---------------LVFKNAN 164
           Y A+   +         N   ++++                            +      
Sbjct: 132 YVAQSGLIGLNGPDSSRNGRPMYDVEKTAYTMEDAKKMATTDGASSQVLTVPLVFKTPEG 191

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220
             + +        Y   +   V N S    +    G++ R             F +    
Sbjct: 192 VEVIKTFTFTQGEYPITVKHQVVNRSQQNWQGQMFGQLKRDNSDDPGKSDQGIFTLGTFL 251

Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271
               G       + K+S+     ++     N+W+ +   Y+ S +IP       +    +
Sbjct: 252 GGAWGTPDAHYNKLKFSNFSDEKLNL-DAKNAWVAMVQHYFVSAWIPGNLKLTQADGQPY 310

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            ++ +            F++  I +  G S+      ++G K    +             
Sbjct: 311 TAKLESRQSADKMNIIGFTSPTINVPAGTSMEVDAKFYSGPKIQSELKDLAV-----GLN 365

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+GW + IAK +F+ + +F+N+VGN+G +I+L T+ VKL+ +PL+ K Y S A M+ 
Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHNIVGNWGWSIILLTILVKLILWPLSSKSYRSMAKMRV 425

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           I P++  ++E+F         + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+
Sbjct: 426 IAPEMQRMKEEFGD-DRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+RHAP+  WI+DL+A DP                     I P++M ++M++Q  ++P P
Sbjct: 485 ELRHAPWLLWIQDLSAMDPWF-------------------ILPLLMGVTMYVQQMLNPQP 525

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
            D  QA +   MP++F   +  FPAGL++YW  +N I+I+QQ+ I K    E   ++++ 
Sbjct: 526 TDPMQAKVFRLMPIIFTVFMLFFPAGLVLYWIVNNAITILQQSFINKS--VEKDRLNKVE 583

Query: 572 S 572
           S
Sbjct: 584 S 584


>gi|325204858|gb|ADZ00312.1| inner membrane protein OxaA [Neisseria meningitidis M01-240355]
          Length = 545

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 134/575 (23%), Positives = 233/575 (40%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q V    +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQTAQQQAVTASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      N P +  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +      ++L       +  ++  +     YL
Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   + N S      S   RI+R   +     +        +    + +  +  +SD+
Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +           +          
Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCSAGDCRIDIKRRNDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A  S     I  G    T   L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLY    INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PIIM+ +M  Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRADPYY-------------------ILPIIMAATMVAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           ++F      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LIFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|225077258|ref|ZP_03720457.1| hypothetical protein NEIFLAOT_02313 [Neisseria flavescens
           NRL30031/H210]
 gi|224951402|gb|EEG32611.1| hypothetical protein NEIFLAOT_02313 [Neisseria flavescens
           NRL30031/H210]
          Length = 548

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 142/575 (24%), Positives = 240/575 (41%), Gaps = 55/575 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A+SV I   W++F+  P+               Q      + AA     
Sbjct: 1   MDF-KRLMAFFAISVAIFAGWEHFFPSPKP-----------NPAQQAAQQQTAAAPAKAA 48

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              AL+ +  + +   ++   I+ K      L L  Y      + P V  L   + +  Y
Sbjct: 49  AEAALAPASPITVTTDTVKAVIDEKSGDLRQLTLLQYKATGDEHKPFV--LFNDSKEYTY 106

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +      ++L     N +  ++  +     YL
Sbjct: 107 VAQSELLDAQGNNILKGIGFSAPQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 166

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237
             +   +TN++   +  S   RI+R   +     +      G +    +    +  +SD+
Sbjct: 167 VNVRFDITNSNGQPVNLSADYRIVRDHSEPEGQGYFTRSYVGPVVYTPEGDFQKVSFSDL 226

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +                      
Sbjct: 227 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCAAGECSIDIKRRNDNL 286

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A  S     I  G    T   L+AG +    I +        + ++  D+G  ++ A 
Sbjct: 287 YSASVSVPLAAIPAGAKAETAINLYAGPQTTSVIANIAD-----KLQLAKDYGKVHWFAS 341

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 342 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 401

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 402 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 460

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+  DP                     I P+IM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 461 LSRPDPFY-------------------ILPLIMAATMFAQTFLNPPPTDPMQAKMMKIMP 501

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 502 LVFSVMFFFFPAGLVLYWVVNNLLTITQQWHINRS 536


>gi|319639364|ref|ZP_07994115.1| inner membrane protein oxaA [Neisseria mucosa C102]
 gi|317399548|gb|EFV80218.1| inner membrane protein oxaA [Neisseria mucosa C102]
          Length = 548

 Score =  320 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 140/575 (24%), Positives = 239/575 (41%), Gaps = 55/575 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A+SV I   W++F+  P+               Q      + AA     
Sbjct: 1   MDF-KRLMAFFAISVAIFAGWEHFFPSPKP-----------NPAQQAAQQQTAAAPAKAA 48

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              AL+ +  + +   ++   I+ K      L L  Y      + P V  L     +  Y
Sbjct: 49  AEAALAPASPITVTTDTVKAVIDEKSGDLRQLTLLQYKATGDEHKPFV--LFNDGKEYTY 106

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L   +         +      ++L     N +  ++  +     YL
Sbjct: 107 VAQSELLDAQGNNVLKGISFSAPQKQYSLEGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 166

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237
             +   +TN+    +  S   RI+R   +     +      G +    +    +  +SD+
Sbjct: 167 VNVRFDITNSKGQPVNLSADYRIVRDHSEPEGQGYFTRSYVGPVVYSPEGGFQKVSFSDL 226

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +           +          
Sbjct: 227 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKDGQSVCAAGDCRIDIKRRNDNL 286

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A  S     I  G    T   L+AG +    I +        + ++  D+G  ++ A 
Sbjct: 287 YSASVSVPLAAIQAGAKAETAINLYAGPQTTSVIANIAD-----KLQLAKDYGKVHWFAS 341

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 342 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 401

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 402 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 460

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+  DP                     I P+IM+ +MF Q  ++PP  D  QA ++  MP
Sbjct: 461 LSRPDPFY-------------------ILPLIMAATMFAQTYLNPPSTDPMQAKMMKVMP 501

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           ++F      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 502 LIFSIMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 536


>gi|322421977|ref|YP_004201200.1| membrane protein insertase, YidC/Oxa1 family [Geobacter sp. M18]
 gi|320128364|gb|ADW15924.1| membrane protein insertase, YidC/Oxa1 family [Geobacter sp. M18]
          Length = 537

 Score =  320 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 146/566 (25%), Positives = 242/566 (42%), Gaps = 39/566 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN-------NERKNIQTVKQPNQVDNSY 53
           ME      +AI LS+ I+YA+   +   +                 +    Q      + 
Sbjct: 1   ME--KRLVIAILLSIGILYAYSFIFPPAKPVPPAGGAKQGVVSSATVAPALQAAATAAAP 58

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
           +A          + +  V +         + +GA      L+ Y          + L++ 
Sbjct: 59  SAAAPVAIPPQATTAKDVTVDTDLYSAVFSSQGAGLKKFVLKKYKDVAGPKGQDIVLVNE 118

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
           +                N   L N +     +S         ++        ++F++  S
Sbjct: 119 TAANRFGLLTDSREFGLNPTALYNVSANELKLSN---GSKGTLEFTTTTPQGVVFKKIYS 175

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
                    +     NS           +   +        G  E +      +  V+ +
Sbjct: 176 FSGDAYRIGLTEQVQNSGAAQVAGALHLLQNSRVIDQKAGGGRYEVYGPSTLTEDAVKSE 235

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
             +    +   + +S +W   +DKY+    I  K +   +Q      G         +  
Sbjct: 236 KLNNLLKAPVQYDKSIAWSSFADKYFTESVIAEKGS--IAQLHMTRPGTDAMLRDIVSPA 293

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
           +T+ PG++ + +  L+ G K+   +            E +ID+GWF  IAKP+ + + + 
Sbjct: 294 VTVAPGQTASVSYALYYGPKDLDILKAQGSS-----LEKVIDYGWFAPIAKPLVVFLKFL 348

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           Y   GN+GIAI++ T  +KL+FFPL  K Y S  +M+ +QPK+  L+EK+K      + K
Sbjct: 349 YKYTGNYGIAIIIITCILKLVFFPLTHKSYKSMKDMQKLQPKMTALKEKYKNDRD-AMNK 407

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
           A+++LYKTH +NPL GC P+L+QIPVFF +Y+ +  S+E+RHAPF+ WI DL+A DP   
Sbjct: 408 AVMELYKTHKVNPLGGCLPMLVQIPVFFGLYRALMYSIELRHAPFYLWITDLSAKDPYY- 466

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533
                             + PIIM  +MFIQ KM+P   D  QA ++  +PVVF F   +
Sbjct: 467 ------------------VTPIIMGATMFIQQKMTPSNMDPVQAKMMLMLPVVFTFMFLN 508

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKM 559
           FP+GL+IYW  +NV++I QQ  I K 
Sbjct: 509 FPSGLVIYWLVNNVLTIAQQMYINKS 534


>gi|218767519|ref|YP_002342031.1| putative inner membrane protein translocase component YidC
           [Neisseria meningitidis Z2491]
 gi|38503190|sp|Q9JW48|OXAA_NEIMA RecName: Full=Inner membrane protein oxaA
 gi|121051527|emb|CAM07824.1| putative integral membrane protein [Neisseria meningitidis Z2491]
          Length = 545

 Score =  320 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 134/575 (23%), Positives = 233/575 (40%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q V    +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQTAQQQAVTASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      N P +  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +      ++L       +  ++  +     YL
Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   + N S      S   RI+R   +     +        +    + +  +  +SD+
Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +           +          
Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y    S     I  G     +  L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLY    INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVINNLLTIAQQWHINRS 533


>gi|220905229|ref|YP_002480541.1| YidC translocase/secretase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869528|gb|ACL49863.1| YidC translocase/secretase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 548

 Score =  320 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 144/579 (24%), Positives = 251/579 (43%), Gaps = 53/579 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVY----PRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M+   N  +AI L +I++  W     Y     R   +  + ++ Q      Q     A  
Sbjct: 1   MQDGKNLLIAIVLCLIVIVGWGYLAEYMGWATRPAPVAQQSQDQQAAHPQPQAQTQAAPA 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
                    +    + +  P     +   G       L+ Y + ++++SP V ++ P + 
Sbjct: 61  QASLPVFTPAPGRDLTVDTPLYEAVVYSGGGALRSFKLKKYQVGLAADSPQVNMVDPKSA 120

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKI-----LTPTTPIKLVFKNANNILFERT 171
           + A    +       N +   S   W++ +G+            ++LV +  N  +    
Sbjct: 121 QVAPLGLVI------NSQPSWSTGQWSMDTGENGLALEQGQQGTLRLVGEVDNLRVVREM 174

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
                +YL +    V N +           +       A + +      +A   D SL E
Sbjct: 175 TFSATNYLIREKIRVVNQTQQARSVRVSYTVAADASNAAGDRYDA--MRVAWDNDGSLKE 232

Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
           +  +   +S+         W G    Y+ +  +P    +   +     +    Y+     
Sbjct: 233 ESSASTLESTGVQAVGKIYWAGAMSTYFLAAVLPGDVNNVTVKGVMQQN---VYRTAVEE 289

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
            E  + PG+    +   + G K    +         P+    +D G+F+ IAK +  L+ 
Sbjct: 290 QETLLGPGQEKELSVSYWVGPKVRSELQAVS-----PQLAKSVDLGFFHIIAKGLLWLLE 344

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           +F+  V N+G+AI+L TV +K  F+PL  K Y S   MK +QP + E+REKFK +  Q+ 
Sbjct: 345 FFHKYVHNWGLAIILLTVLIKAAFWPLTAKSYASMEKMKKLQPHMMEIREKFKDNKEQM- 403

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIK 463
            K ++ LYKT+ +NP +GC PIL+Q+PVFF +Y+ +  S+E+RHAPF          W+ 
Sbjct: 404 NKEVMALYKTYGVNPASGCVPILIQLPVFFGLYQALLTSIELRHAPFITYLPGTDILWLA 463

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DL+  DP                     I P+IM L+MF+Q +MSPP  D  Q  I+ ++
Sbjct: 464 DLSTKDPLY-------------------ITPVIMGLTMFLQQRMSPPATDPTQQKIMMFL 504

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           P++F     +FP+GL++YW  +NV+SI QQ ++++   A
Sbjct: 505 PLIFTALFLNFPSGLVLYWLVNNVLSIAQQQMMIRKFKA 543


>gi|304388454|ref|ZP_07370560.1| YidC/Oxa1 family membrane protein insertase [Neisseria meningitidis
           ATCC 13091]
 gi|304337571|gb|EFM03734.1| YidC/Oxa1 family membrane protein insertase [Neisseria meningitidis
           ATCC 13091]
          Length = 545

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 134/575 (23%), Positives = 233/575 (40%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q V    +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      N P +  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +      ++L       +  ++  +     YL
Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   + N S      S   RI+R   +     +        +    + +  +  +SD+
Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +           +          
Sbjct: 224 DNDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y    S     I  G     +  L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLY    INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|262273127|ref|ZP_06050944.1| OxaI/YidC membrane insertion protein [Grimontia hollisae CIP
           101886]
 gi|262222883|gb|EEY74191.1| OxaI/YidC membrane insertion protein [Grimontia hollisae CIP
           101886]
          Length = 522

 Score =  319 bits (817), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 126/546 (23%), Positives = 229/546 (41%), Gaps = 37/546 (6%)

Query: 23  NFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSI 82
                         +   Q  +    V  S  A     +      +  + L++  L  ++
Sbjct: 3   YLNWTEATNPQPQGQGVTQQAQHSGDVPASSDASQPLTQDAV--SNKLITLQSDVLTLTV 60

Query: 83  NLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVW 142
           + +G       L  Y  +  S++  V L   +   + + A+   +       L       
Sbjct: 61  DTQGGDIIHAELNQYDAEFDSDNKFVLL--KNQPDHVFVAQSGLIGADGIDTLNGRAKFT 118

Query: 143 NLISGKILTPTTPI---KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPR 199
              +  ++          L  +       +  +    +Y   +  T+ N S  +      
Sbjct: 119 ANGTDFVMADGQDELRVPLTLEKDGITYTKTFVLKRNNYAVDVDYTIDNQSGKEANVQMY 178

Query: 200 GRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKY 258
            ++ ++      + T     G +    D    +  + D++  +++       W G+   Y
Sbjct: 179 AQLKQNLLDDGGSLTMPTYRGGVYSADDAKYEKYSFDDMKDRNLNLTIAEQGWAGMMQHY 238

Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318
           + + +IP  +   +   +  +               T+  G +      L+ G K    +
Sbjct: 239 FVAAWIPHSDGEANLYTRTSNGQGF---IGVRYPTTTVAAGSTAQLDATLWVGPKLQDQM 295

Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378
                    P   + +D+GW +FIA P+  L+S     VGN+G+AI++ T  V+ + +PL
Sbjct: 296 EQTA-----PNLNLTVDYGWLWFIASPLHWLLSTIQGFVGNWGVAIIILTFIVRGVMYPL 350

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438
            K QY S A M+ +QPK+ E+RE+      Q + + M++LYK   +NPL GC P+LLQ+P
Sbjct: 351 TKAQYTSMAKMRMLQPKLQEMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPLLLQMP 409

Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           +F A+Y  +  S+E+RHAPF  WI+DL+A DP                     + P++M 
Sbjct: 410 IFIALYWALMESVELRHAPFMLWIQDLSAPDPFY-------------------VLPLLMG 450

Query: 499 LSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            SMF+  KMSP    D  Q  I+N+MPV+F      FPAGL++YW  SN+++++QQ +I 
Sbjct: 451 ASMFLIQKMSPSTVTDPMQQKIMNFMPVMFTVFFLWFPAGLVLYWLVSNIVTLLQQTLIY 510

Query: 558 KMHGAE 563
           +    +
Sbjct: 511 RALEKK 516


>gi|172062138|ref|YP_001809790.1| putative inner membrane protein translocase component YidC
           [Burkholderia ambifaria MC40-6]
 gi|254772757|sp|B1YQJ7|OXAA_BURA4 RecName: Full=Inner membrane protein oxaA
 gi|171994655|gb|ACB65574.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria
           MC40-6]
          Length = 554

 Score =  319 bits (817), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 145/577 (25%), Positives = 240/577 (41%), Gaps = 46/577 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVD-------- 50
           M+        I     ++    WQ  +  P +   +  +         +           
Sbjct: 1   MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGTGATTTTAGE 60

Query: 51  -NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
             + AA          + +  V+       G I+ +G     L L+          P + 
Sbjct: 61  VPAAAAGTAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLY 117

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNI 166
           +    +T    +     +   +     +  T  N     +      +KL F+        
Sbjct: 118 ITLFDHTAGHTYLARTGLLGGDFPNHNDVYTQVNAGPTSLTGDQNALKLSFESPVKGGVK 177

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLG 225
           + +        Y+  +   + N     +  +    ++R      T  F     G      
Sbjct: 178 VVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTD 237

Query: 226 DKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
            K   +  +SD++K+  +      N W+ +   Y+AS +IP +               A 
Sbjct: 238 AKHFQKIDFSDLDKNKANFEKAADNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPAL 295

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y+         I PG+S      LFAG +E   +         P  E++ D+GW   IAK
Sbjct: 296 YRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAK 350

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L+   +  VGN+G AI+L TV +K +FFPL+   Y S A MK I P++  LRE+F 
Sbjct: 351 PLFWLLEKIHGFVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF- 409

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
           +S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI D
Sbjct: 410 KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHD 469

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+  DP                     I P++M++SMF+Q  ++P P D  QA ++ +MP
Sbjct: 470 LSQRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMP 510

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           + F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 511 IAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 547


>gi|325127482|gb|EGC50411.1| inner membrane protein OxaA [Neisseria meningitidis N1568]
          Length = 545

 Score =  319 bits (817), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 134/575 (23%), Positives = 234/575 (40%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q V    +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQATQQQAVTASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      + P V  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRQLTLLQYKATGDEHKPFV--LFNDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +      ++L       +  ++  +     YL
Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   + N S      S   RI+R   +     +        +    + +  +  +SD+
Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +           +          
Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y    S     I  G     +  L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ +DP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRSDPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|189426685|ref|YP_001953862.1| hypothetical protein Glov_3642 [Geobacter lovleyi SZ]
 gi|254772788|sp|B3E3S0|OXAA_GEOLS RecName: Full=Inner membrane protein oxaA
 gi|189422944|gb|ACD97342.1| 60 kDa inner membrane insertion protein [Geobacter lovleyi SZ]
          Length = 530

 Score =  319 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 150/562 (26%), Positives = 249/562 (44%), Gaps = 40/562 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVY---PRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME      +A+ LS+ + Y +  FY     P    ++   K       P     + A   
Sbjct: 1   ME--KRTILAVVLSIGVFYLFSFFYGPEKKPAPAAVSVPVKTENVGAAPAVSVQAAAIAP 58

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
           +      +  +  V ++        +  GA    L L+G+       +  V LL      
Sbjct: 59  VVVPK--IVSAADVTVETERYTAVFSGVGASLKSLTLKGFRETNKPGAAQVKLL---ANA 113

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
           +              +    + +        +      +   + +A   +  +T + D  
Sbjct: 114 DPALPSFSTRGVGFALSAQAAYSPNVSSLKLLSGEKKQLVFTYVDAQGFVVRKTYTFDGT 173

Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            Y   +   + NNS   I  + +            +  G  E + + L     +      
Sbjct: 174 GYGIALETQLVNNSAAPIAGAFQYLFTSPFDPPQKD--GRYETYGSSLYADGSLHTDAPK 231

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
              S+   + +  +W  I+DKY+ S  +    +    + K  + G+   ++  S    ++
Sbjct: 232 NVASATKKYDKGITWAAINDKYFLSALLSVNNSIASVELKKSAAGY--LESDISTPAFSV 289

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
            PG+++T  + LF G KE   +            E  +D GWF  IAKPM   + +FY  
Sbjct: 290 APGQAVTVAHKLFIGPKEIDILKAQGSS-----LEQSLDLGWFSAIAKPMLYSLKFFYRY 344

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           VGN+GIAI++ TV +K+ FFPL  K Y S   M  +QPK+  L+EK+K      + +A++
Sbjct: 345 VGNYGIAIIIITVILKIFFFPLTHKSYKSMKEMGKLQPKMAALKEKYKNDKD-AMNRAVM 403

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LY+ H +NPL GC P+++QIPVFFA+YK +  S+E+RHAPF  WI DL+  DP      
Sbjct: 404 ELYRDHKVNPLGGCLPMIVQIPVFFALYKALMYSIELRHAPFMFWITDLSDKDPFY---- 459

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536
                          + P+IM ++MFIQ KM+P   D+ Q  I+  +PV+F F   SFP+
Sbjct: 460 ---------------VTPVIMGVTMFIQQKMTPSNMDEMQQKIMLGLPVIFTFMFLSFPS 504

Query: 537 GLIIYWSWSNVISIVQQAVIMK 558
           GL++YW  +N+++I QQA I K
Sbjct: 505 GLVLYWLINNILTIGQQAYINK 526


>gi|254468017|ref|ZP_05081423.1| inner membrane protein, 60 kDa [beta proteobacterium KB13]
 gi|207086827|gb|EDZ64110.1| inner membrane protein, 60 kDa [beta proteobacterium KB13]
          Length = 535

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 145/558 (25%), Positives = 258/558 (46%), Gaps = 37/558 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
                  + +  S  ++  W ++      ++       +   +  +     Y +  I++ 
Sbjct: 1   METKRLILFVVFSFSLLLLWDSW-----QQKQLQTELAVNNAELSDLQPGDYDSSNIENP 55

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
           A  L+   ++ +K       IN  G     L L  +     +   +  +L+       Y 
Sbjct: 56  AYQLADDQKIVVKTSLYEAEINTVGGDIRKLKLANFQN--DNKDGLYEILNDEMNPLLYI 113

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181
           A+   +    N+         + +  +       + ++F+N    + +  I  +++Y  K
Sbjct: 114 AQSGLI--GKNLPTHKDVFKSDQLQYESNDQEVSVPIIFENEEVKVVKTYIFSNDNYQIK 171

Query: 182 IVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
           +V ++TN S   ++     +++  HK    +       G           +  + DI+  
Sbjct: 172 LVTSITNKSDAALQPQIYYQLLHDHKSAEKSGMMPTFTGVSYFTEASKFKKMDFDDIDNQ 231

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
                + ++ W+GI  +Y+AS +I    +      K L+DG     A   A    +  G 
Sbjct: 232 KPFTQNANDGWIGIIQRYFASAWIIPGNSPRQFYTKRLTDG--ISSAGVRAKLAMVEAGS 289

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
           S   ++ L++G +    +         P  E  +D+GW  FIA P+F L+S    LV N+
Sbjct: 290 SAEVSSVLYSGPQLKKQLIKAA-----PGMEYTVDYGWLTFIASPLFSLLSGIQKLVHNW 344

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G++I+L T+ +K+ F+PL+   Y S A +K + P++  ++EKF     Q +Q+AM++LYK
Sbjct: 345 GVSIILLTLVIKIFFYPLSASSYRSMAQLKEVAPRLQSMKEKFGDDK-QKMQQAMMELYK 403

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
           T  INPL GC PIL+QIPVF A+Y V+  ++E+R APF+GWI DL+  DP          
Sbjct: 404 TEKINPLGGCLPILIQIPVFIALYWVLLGAVELRQAPFFGWITDLSVKDPLY-------- 455

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
                      I PI+M+ SMF+Q K++P P D  QA ++  MP++F      FPAGL++
Sbjct: 456 -----------ILPILMAASMFLQQKLNPKPTDPTQARLMMMMPIIFSIFFFFFPAGLVL 504

Query: 541 YWSWSNVISIVQQAVIMK 558
           YW  +NV+S++QQ  + K
Sbjct: 505 YWFINNVLSMMQQWYVNK 522


>gi|304414291|ref|ZP_07395659.1| Preprotein translocase subunit YidC [Candidatus Regiella
           insecticola LSR1]
 gi|304283505|gb|EFL91901.1| Preprotein translocase subunit YidC [Candidatus Regiella
           insecticola LSR1]
          Length = 542

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 139/572 (24%), Positives = 246/572 (43%), Gaps = 59/572 (10%)

Query: 1   MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M    N  +   L  S +I   WQ     P   +   +               S   V +
Sbjct: 1   MAPQRNLLLIALLFVSFMIWQTWQVDNNPPSSSQTAQQ---------------STDTVSM 45

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
            ++  A +    ++++   L  +IN +G   +  NL  Y   + S+ P   L   +    
Sbjct: 46  ANQTAADTQKQLIKVQTDVLSLTINTRGGDIEQANLLAYPNVLGSDKPFELL--ETTPAF 103

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKI-----LTPTTPIKLVFKNANNILFERTIS 173
            Y A+             N        +              I L F +   ++F +T  
Sbjct: 104 IYQAQSGLTGKNGPDNPANGARPLFTATQDHFVLAENQDELRIPLTFTSQEGVIFTKTFV 163

Query: 174 LDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMR------HKPQTATNTFGVQEGFIAVLGD 226
           L  +     +   V N     + FS  G++ +      ++   ++N         A   D
Sbjct: 164 LKRNDYAIGVHYQVKNTFATPLEFSLFGQLKQSINLPQYRDTGSSNFALQTYRGAAYSSD 223

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
           ++  ++      + +  N      W+ +  +Y+A+ +IP+ + +    F      +    
Sbjct: 224 ETKYKKYSFSDIEETNLNTVTQGGWVAMLQQYFATAWIPAAQETHT--FYSNKLSNGLAA 281

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
             F +  + I PG+       L+ G +    +            ++ +D+GW +FI++P+
Sbjct: 282 IGFKSMPVVIPPGEQKDLAATLWIGPEIQDKMAAIAT-----HLDLTVDYGWLWFISQPL 336

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+ +    +GN+G +I++ T  V+ + +PL K QY S A M+ IQPK+ E+RE+    
Sbjct: 337 FKLLHFIQGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMIQPKLTEMRERIGDD 396

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q + + M+ LYKT  +NPL GC P+L+Q+P+F A+Y ++  S+E+RHA F  WI DL+
Sbjct: 397 K-QRMSQEMMALYKTEQVNPLGGCLPLLIQMPIFLALYYMLMSSVELRHASFILWIHDLS 455

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
           A DP                     I PI+M ++M+   KMSP    D  Q  I+ +MPV
Sbjct: 456 AQDPYY-------------------ILPILMGITMYFIQKMSPTTITDPMQQKIMTFMPV 496

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +F      FPAGL++Y+  SN+++I+QQ +I 
Sbjct: 497 IFTVFFLWFPAGLVLYYIVSNLVTILQQYLIY 528


>gi|82703889|ref|YP_413455.1| 60 kDa inner membrane insertion protein [Nitrosospira multiformis
           ATCC 25196]
 gi|123543756|sp|Q2Y5A8|OXAA_NITMU RecName: Full=Inner membrane protein oxaA
 gi|82411954|gb|ABB76063.1| protein translocase subunit yidC [Nitrosospira multiformis ATCC
           25196]
          Length = 569

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 147/584 (25%), Positives = 244/584 (41%), Gaps = 55/584 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+    + + +  +  +++ W  +           +     T  Q N      A   +  
Sbjct: 1   MDTQR-FVLFLIFATSLLFLWDAWQKEQYPATQGPKTAVQGTETQANTGTAGTAETPVPG 59

Query: 61  RAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLNLRGYHL 99
              A S+  R                     + +K   ++  I+  G     L L     
Sbjct: 60  DQLASSVPQRGSTAENGAPVRAAGKLESGDKITIKTDMVLAEIDTAGGDIRRLELLHQPS 119

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159
               N P   L   S+ +  Y A+   +                            I+L 
Sbjct: 120 KEDKNKPFALL--ESDPERVYIAQSGLIGEGLPTHKTRFTAEPGAYELAAGQDKIQIRLS 177

Query: 160 FKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG--V 216
               + +   +  +     YL  +   V N     I+     +++R       + F    
Sbjct: 178 APEVDGVQVTKIYTFHRGSYLIDVSFEVANQRNAAIQPFSYFQMLRDSRPPVGSFFMVPT 237

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQF 275
             G      ++   + ++S ++K + S      N W+ +  +Y+ + ++P  +       
Sbjct: 238 YTGAALYTEEEKFRKIEFSALDKGNASYPKNADNGWIAMLQQYFLAAWLPKDKLPREYYA 297

Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
           K L  G   Y A        I PG S T T  L+AG +E   +         P  ++++D
Sbjct: 298 KRL--GENEYTAGVIVPVGQIEPGSSATVTVPLYAGPEEQSKLASIA-----PGLDLVVD 350

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           +GW   I  P+F L+S F++  GN+G+AI+L T+ VKL FFPL+   Y S A ++ + PK
Sbjct: 351 YGWLTVIGAPLFWLLSLFHSWTGNWGVAIILLTMSVKLAFFPLSAAGYRSMAKLRLVTPK 410

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           +  LRE+      Q + +AM+  YKT  INP+ GC PIL+QIPVF ++Y V+  S+E+R+
Sbjct: 411 LQRLREQHGN-DRQRMHQAMMDFYKTEKINPMGGCLPILVQIPVFISLYWVLLSSVELRY 469

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           A F  WI+DL+A DP                     + P+IM +SMF+Q ++SPP  D  
Sbjct: 470 ASFALWIEDLSAPDPYY-------------------VLPVIMGISMFLQQRLSPPATDPI 510

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           QA ++  MP+ F      FPAGL++Y   +NV+SI QQ  I +M
Sbjct: 511 QARVMQIMPLAFSVFFFFFPAGLVLYSLVNNVLSIAQQWQITRM 554


>gi|291615449|ref|YP_003525606.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Sideroxydans lithotrophicus ES-1]
 gi|291585561|gb|ADE13219.1| membrane protein insertase, YidC/Oxa1 family domain containing
           protein [Sideroxydans lithotrophicus ES-1]
          Length = 545

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 142/567 (25%), Positives = 246/567 (43%), Gaps = 36/567 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
                 F+ +  S  +V  W  +     P  +  +   +   +V       +    +   
Sbjct: 1   MDLRRLFLFLTFSFSLVLLWSAWTRQNEPSAQAESAVIQKDPSVPLEPARVSEQQVMSSS 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             AQ  S   ++++        IN  G     L+L  +   +  + P+  +         
Sbjct: 61  LEAQKTSAGKKIDVTTDIFKVVINTTGGNIQHLDLLKHKDAIDKSKPLTLM--QQQGDRI 118

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178
           Y A+   +           +   +            ++L   +++     +  +     Y
Sbjct: 119 YIAQSGLLGKGLPTHNAEFSVTGDQFHLSEGKDDLEVRLTALDSDEARVTKVYTFHRGSY 178

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ--TATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           L  +   + N S   +  S   +++R       A+       G       +   + ++SD
Sbjct: 179 LIDVTYEIENKSQSALLPSAYFQLVRDSTPVAGASRFVPTFTGPAIYTEQEKFRKIQFSD 238

Query: 237 IEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           IEK+      +  N W+G+   Y+ S ++P  +       K L      + A        
Sbjct: 239 IEKNKAKLPLNPDNGWIGMLQHYFVSAWLPEAKGKREFYAKKLDGNE--FSAGVILPVAK 296

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I PG++   +  L+AG  +         D   P   + +D+GW   IA P+F L+S+   
Sbjct: 297 IEPGQTGKISAELYAGPAQSKL------DKIAPGLGLTVDYGWLTIIATPLFWLLSHIDE 350

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            + N+G++I+L TV +KL FFPL+   Y S A M+ + PK++++++++     ++   AM
Sbjct: 351 WIHNWGVSIILLTVLIKLAFFPLSAASYRSMAKMRLVAPKLEKIKQQYSDDREKLNH-AM 409

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           + LYKT  INPL GC P+++QIPVF A+Y  I  S+E+RHAPF+GWI DL+AADP     
Sbjct: 410 MDLYKTEKINPLGGCLPMIIQIPVFIALYWAILSSVELRHAPFFGWITDLSAADPYY--- 466

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
                           + P+IM LSM +Q K++P P D  QA ++  MP+VF      FP
Sbjct: 467 ----------------VLPLIMGLSMLVQSKLNPVPPDPMQAKLMQIMPIVFSVVFFFFP 510

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGA 562
           AGL++Y   +N++SI QQ  I +   A
Sbjct: 511 AGLVLYSVVNNILSIAQQWYITRGTKA 537


>gi|261363929|ref|ZP_05976812.1| membrane protein insertase, YidC/Oxa1 family [Neisseria mucosa ATCC
           25996]
 gi|288567942|gb|EFC89502.1| membrane protein insertase, YidC/Oxa1 family [Neisseria mucosa ATCC
           25996]
          Length = 547

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 138/575 (24%), Positives = 241/575 (41%), Gaps = 56/575 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A+S+ I   W++F+  P+                               
Sbjct: 1   MDF-KRLVAFFAISLAIFAGWEHFFPSPKP------------NPAQQAAQQQQQTAATAA 47

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              AL+ +  + +   ++   I+ K      + L  Y  +   N    TL + S     Y
Sbjct: 48  AEAALAPATPITVTTDTVKAVIDEKSGDLRQMTLLKYKANGDENKAF-TLFNDSKEY-TY 105

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L   N         +      ++L     N +  ++  +   + YL
Sbjct: 106 VAQSELLDAQGNNILKGVNFTAAQKEYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYL 165

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   +TN+S   +  S   RI+R   +     +        +    +    +  +SD+
Sbjct: 166 VNVRFDITNSSGKPVNLSADYRIVRDHSEPEGQGYFTHSYLGPVVYTPEDKFQKVSFSDL 225

Query: 238 EKSSISNFHE-------SNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S  +E          WLG+ + ++ S +I   +           +          
Sbjct: 226 DDDAKSGKNEAEYARKTQTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDNL 285

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y    S     I  G     +  L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 286 YSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 340

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 341 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 400

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 401 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 459

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ +DP                     I P+IM+++MF Q  ++PPP D  QA ++  MP
Sbjct: 460 LSRSDPYY-------------------ILPVIMAVTMFAQTFLNPPPTDPMQAKMMKVMP 500

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 501 LVFSAMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 535


>gi|115353266|ref|YP_775105.1| putative inner membrane protein translocase component YidC
           [Burkholderia ambifaria AMMD]
 gi|122321904|sp|Q0BAQ2|OXAA_BURCM RecName: Full=Inner membrane protein oxaA
 gi|115283254|gb|ABI88771.1| protein translocase subunit yidC [Burkholderia ambifaria AMMD]
          Length = 554

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 145/577 (25%), Positives = 240/577 (41%), Gaps = 46/577 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVD-------- 50
           M+        I     ++    WQ  +  P +   +  +         +           
Sbjct: 1   MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGTGATTTTAGE 60

Query: 51  -NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
             + AA          + +  V+       G I+ +G     L L+          P + 
Sbjct: 61  VPAAAAGTAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLY 117

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNI 166
           +    +T    +     +   +     +  T  N     +      +KL F+        
Sbjct: 118 ITLFDHTAGHTYLARTGLLGGDFPNHNDVYTQVNAGPTSLTGDQNALKLSFESPVKGGVK 177

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLG 225
           + +        Y+  +   + N     +  +    ++R      T  F     G      
Sbjct: 178 VVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTD 237

Query: 226 DKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
            K   +  +SD++K+  +      N W+ +   Y+AS +IP +               A 
Sbjct: 238 AKHFQKIDFSDLDKNKANFEKAADNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPAL 295

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y+         I PG+S      LFAG +E   +         P  E++ D+GW   IAK
Sbjct: 296 YRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAK 350

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L+   +  VGN+G AI+L TV +K +FFPL+   Y S A MK I P++  LRE+F 
Sbjct: 351 PLFWLLEKIHGFVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF- 409

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
           +S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI D
Sbjct: 410 KSDPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHD 469

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+  DP                     I P++M++SMF+Q  ++P P D  QA ++ +MP
Sbjct: 470 LSQRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMP 510

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           + F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 511 IAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 547


>gi|15677738|ref|NP_274901.1| putative inner membrane protein translocase component YidC
           [Neisseria meningitidis MC58]
 gi|121634185|ref|YP_974430.1| putative inner membrane protein translocase component YidC
           [Neisseria meningitidis FAM18]
 gi|38503191|sp|Q9JXS4|OXAA_NEIMB RecName: Full=Inner membrane protein oxaA
 gi|166975876|sp|A1KRZ8|OXAA_NEIMF RecName: Full=Inner membrane protein oxaA
 gi|7227164|gb|AAF42237.1| 60 kd inner-membrane protein [Neisseria meningitidis MC58]
 gi|120865891|emb|CAM09627.1| putative integral membrane protein [Neisseria meningitidis FAM18]
 gi|316985524|gb|EFV64471.1| 60Kd inner membrane family protein [Neisseria meningitidis H44/76]
 gi|325131545|gb|EGC54252.1| inner membrane protein OxaA [Neisseria meningitidis M6190]
 gi|325133546|gb|EGC56209.1| inner membrane protein OxaA [Neisseria meningitidis M13399]
 gi|325139200|gb|EGC61746.1| inner membrane protein OxaA [Neisseria meningitidis ES14902]
 gi|325141536|gb|EGC64005.1| inner membrane protein OxaA [Neisseria meningitidis 961-5945]
 gi|325143618|gb|EGC65937.1| inner membrane protein OxaA [Neisseria meningitidis M01-240013]
 gi|325197597|gb|ADY93053.1| inner membrane protein OxaA [Neisseria meningitidis G2136]
 gi|325200959|gb|ADY96414.1| inner membrane protein OxaA [Neisseria meningitidis H44/76]
 gi|325206814|gb|ADZ02267.1| inner membrane protein OxaA [Neisseria meningitidis M04-240196]
          Length = 545

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 134/575 (23%), Positives = 232/575 (40%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q V    +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      N P +  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +      ++L       +  ++  +     YL
Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   + N S      S   RI+R   +     +        +    + +  +  +SD+
Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +                      
Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGRQSVCAAGECNIDIKRRNDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y    S     I  G     +  L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLY    INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|171316349|ref|ZP_02905569.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria
           MEX-5]
 gi|171098478|gb|EDT43280.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria
           MEX-5]
          Length = 554

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 144/577 (24%), Positives = 240/577 (41%), Gaps = 46/577 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVD-------- 50
           M+        I     ++    WQ  +  P +   +  +         +           
Sbjct: 1   MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGTGATTTTAGE 60

Query: 51  -NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
             + AA          + +  V+       G I+ +G     L L+          P + 
Sbjct: 61  VPAAAAGTAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLY 117

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNI 166
           +    +T    +     +   +     +  T  N     +      +KL F+        
Sbjct: 118 ITLFDHTAGHTYLARTGLLGGDFPNHNDVYTQVNAGPTSLTGDQNALKLSFESPVKGGVK 177

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLG 225
           + +        Y+  +   + N     +  +    ++R      T  F     G      
Sbjct: 178 VVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTD 237

Query: 226 DKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
            K   +  +SD++K+  +      N W+ +   Y+AS +IP +                 
Sbjct: 238 AKHFQKIDFSDLDKNKANFEKAADNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPTL 295

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y+         I PG+S      LFAG +E   +         P  E++ D+GW   IAK
Sbjct: 296 YRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAK 350

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L+   ++ VGN+G AI+L TV +K +FFPL+   Y S A MK I P++  LRE+F 
Sbjct: 351 PLFWLLEKIHSYVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF- 409

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
           +S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI D
Sbjct: 410 KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHD 469

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+  DP                     I P++M++SMF+Q  ++P P D  QA ++ +MP
Sbjct: 470 LSQRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMP 510

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           + F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 511 IAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 547


>gi|94501616|ref|ZP_01308133.1| putative inner membrane protein translocase component YidC
           [Oceanobacter sp. RED65]
 gi|94426299|gb|EAT11290.1| putative inner membrane protein translocase component YidC
           [Oceanobacter sp. RED65]
          Length = 538

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 143/563 (25%), Positives = 242/563 (42%), Gaps = 45/563 (7%)

Query: 16  IIVYAWQNFY---VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI------DDRAQALS 66
           ++V  W   Y        E +      +Q V  P    ++ +   +        + Q  +
Sbjct: 1   MLVLQWNEDYGKRPTQVAEPITRLTSPVQEVDIPTDTSDADSDAPVVQDNMDAPQTQTQA 60

Query: 67  MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126
            +  ++++   L   I+  G       L+ Y L V        LL  SN    Y A+   
Sbjct: 61  TTEWIKVETDVLDIRIDPVGGDIVYAALKQYPLSVDQQDVPFVLLEQSNI-RTYIAQSGL 119

Query: 127 VSTANNIELPNSNTVWNLISGK--ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184
           V      +   +                   + L     N  + +        YL  +  
Sbjct: 120 VGKNGIDKKGRAQYSVEKTEYNLADGQDQIQVVLATTQNNVKIEKVFTINRGEYLIDVGF 179

Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNT----FGVQEGFIAVLGDKSLVEQKYSDIEKS 240
            + N S +  + +   +  R +    ++          G       +   +  + DIE+ 
Sbjct: 180 RIDNQSQEPWQANFYAQFKRDRSVDPSSMESMGMASFLGAAVTRPSERYFKMDFDDIEED 239

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
                     W+     Y+   ++PSK+ +     +        Y   +  + + + PG 
Sbjct: 240 PFKE-KIEGGWIAFLQHYFLGAWVPSKDEAHVYNTR---KASGHYLVGYYDSALQVEPGT 295

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
              T+  L+ G K+   +    +       ++ ID+GW +++A+P+F L+   +++ GN+
Sbjct: 296 QGGTSTQLYLGPKDQDRLAEIAE-----HLDLTIDYGWLWWVAQPLFWLLQLMHDIAGNW 350

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G AI++ T+ VKL FFPL+   Y S ANM+ + PK+  ++E++  +  Q L K M+ LYK
Sbjct: 351 GWAIIMLTILVKLAFFPLSAASYRSMANMRRVAPKLTAIKEQYADNREQ-LSKEMMNLYK 409

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
              INPL GC PIL+Q+PVF A+Y V+  S+E+R APF  WI+DL+  DP          
Sbjct: 410 KEKINPLGGCLPILVQMPVFIALYWVLMESVELRQAPFMLWIEDLSLKDPYF-------- 461

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
                      I P+IM  SMF+QM+++P P D  QA ++  MPVVF      FPAGL++
Sbjct: 462 -----------ILPLIMGASMFVQMQLNPTPPDPMQAKVMKLMPVVFTVFFLFFPAGLVL 510

Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563
           YW  +N++SI QQ  I +   AE
Sbjct: 511 YWVVNNLLSIAQQYYITRKIEAE 533


>gi|330818731|ref|YP_004362436.1| Putative inner membrane protein translocase component YidC
           [Burkholderia gladioli BSR3]
 gi|327371124|gb|AEA62480.1| Putative inner membrane protein translocase component YidC
           [Burkholderia gladioli BSR3]
          Length = 553

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 146/579 (25%), Positives = 246/579 (42%), Gaps = 46/579 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEE--MNNERKNIQTVKQPNQV 49
           M+        I     ++    WQ        F+          + +  +  +       
Sbjct: 1   MDIKRTVLWVIFFMSAVMLYDNWQRAHGRQSMFFPNVTQTTGASSTDASSGASAAGGAPA 60

Query: 50  DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
               A+    D    ++ +  V+       G I+ +G     L L+    +     P + 
Sbjct: 61  ALPAASTTAPDSTAPIAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---EGDGKQPDLF 117

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNI 166
           +    +TK+  +     V+  N     +  T        +      +KL F+        
Sbjct: 118 VTLFDHTKDHTYLARTGVTGGNFPNHNDLYTPAAGNPSALAAGQDSMKLSFESQEKGGVK 177

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLG 225
           + +        Y+  +   + N     +  +    I+R      T  F     G      
Sbjct: 178 VVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMEIVRDSTPVETPLFSHTFLGPAVYTD 237

Query: 226 DKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
            K   +  +SDI+K+         N W+ +   Y+AS +IP +               + 
Sbjct: 238 QKHFQKITFSDIDKNKAEYISSADNGWVAMVQHYFASAWIPQQG--VKRDIYVEKIDPSL 295

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y+        TI PG+S   +  LFAG +E   +         P  +++ D+GW   IAK
Sbjct: 296 YRVGVKEQVKTIEPGQSADVSARLFAGPEEERVLEGIA-----PGLDLVKDYGWVTIIAK 350

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L+   +  VGN+G +I+L T+ +K +FFPL+   Y S A MK I P++  LRE+F 
Sbjct: 351 PLFWLLQKIHGYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF- 409

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
           +S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI D
Sbjct: 410 KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHD 469

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+  DP                     I P++M+ SMF+Q +++P P D  QA ++ +MP
Sbjct: 470 LSQRDPFF-------------------ILPVLMAGSMFLQTRLNPTPPDPVQAKMMMFMP 510

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           + F      FPAGL++Y+  +NV+SI QQ  I +  G +
Sbjct: 511 IAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTIGKK 549


>gi|294789683|ref|ZP_06754916.1| inner membrane protein OxaA [Simonsiella muelleri ATCC 29453]
 gi|294482395|gb|EFG30089.1| inner membrane protein OxaA [Simonsiella muelleri ATCC 29453]
          Length = 555

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 133/575 (23%), Positives = 247/575 (42%), Gaps = 62/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+       A+ LS+ I+  WQ+F+  P+  +                   + + +    
Sbjct: 1   MDF-KRMLWAMILSLAIMMTWQHFFPTPQPNQP------------------TKSPIATTH 41

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              ALS +  + ++  ++   I+ K      L L  Y          V  L     ++ Y
Sbjct: 42  PIAALSETSPITVQTDTVQAVIDEKSGDLRGLTLLKYDATEDKTKNFV--LFDDKPQHTY 99

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+   +    N  L N        S  +      + L     N +   +  +     YL
Sbjct: 100 IAQSQLIDANGNNLLKNVTFTAAQKSYMLNGDKVEVHLTAPMQNGLQISKIYTFTQGSYL 159

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDI 237
             +   V N        S    +  +        F        +         +  +SD+
Sbjct: 160 VNVRFDVQNQGAATKLGSNYAIVRDNHTPEGQGFFMHSYTGPVVYTPDADEFQKVTFSDL 219

Query: 238 EKS-------SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
           +         +      +  + G+   Y+A+ ++     +  +  +   + + + Q+   
Sbjct: 220 DDDFKTGKDTAEYQRKATGGYAGMIQHYFAATWLAQTHDTGSNICETGCNINIKKQSDTL 279

Query: 291 ANEITILP------GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
            + +   P      G + + +  L+AG +    ++        P+ ++L D+G  +  A 
Sbjct: 280 YSVVLNTPMKDVAAGSTQSFSANLYAGPQTTSILNKVA-----PKLDLLKDYGRVHIFAA 334

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N +GN+G AI+  T+ VK + FPL +K Y S A M+ + PK++ L++++ 
Sbjct: 335 PLFWLLNKLHNFIGNWGWAIIFLTLIVKAVLFPLNQKAYKSMAKMRTVAPKMEALKKQYA 394

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                 +Q+AMI+LYK   INPL GC P+L+Q+P+F  +Y +I +S+E+R AP+ GWI D
Sbjct: 395 N-DQMGMQQAMIKLYKDEQINPLGGCLPMLIQMPIFIGLYWMIFLSVELRQAPWLGWITD 453

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PI+M+ +M+ Q K+SPPP+D  QA ++  MP
Sbjct: 454 LSRADPFY-------------------ILPILMAATMWFQTKLSPPPSDPMQAQMMKIMP 494

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           ++F      FPAGL++Y+  +N+++I QQ  I + 
Sbjct: 495 LMFSIMFFFFPAGLVLYYVVNNLLTIAQQWYINRS 529


>gi|255066611|ref|ZP_05318466.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sicca ATCC
           29256]
 gi|255049195|gb|EET44659.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sicca ATCC
           29256]
          Length = 548

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 140/578 (24%), Positives = 244/578 (42%), Gaps = 55/578 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+    +    A+S+ I   W++F+  P+               Q               
Sbjct: 1   MDF-KRFIAFFAISLAIYAGWEHFFPSPKP-----------NPAQQAAQQQQQQTATTAA 48

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              AL+ +  + +   ++   I+ K      + L  Y  +   N P  TL + S     Y
Sbjct: 49  AEAALAPATPITVTTDTVKAVIDEKSGDLRQMTLLKYKANGDENKPF-TLFNDSKEY-TY 106

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L   N         +      ++L     N +  ++  +   + YL
Sbjct: 107 VAQSELLDAQGNNILKGVNFTAAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYL 166

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237
             +   +TN S      S   RI+R + +     +      G +    +    +  +SD+
Sbjct: 167 VNVRFDITNTSGKPANLSADYRIVRDRSEPEGQGYFTRSFVGPVVYTPEGKFQKVNFSDL 226

Query: 238 EKSSISNFHE-------SNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S  +E          WLG+ + ++ S +I   +           +          
Sbjct: 227 DDDAKSGKNEAEYARKTQTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDNL 286

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y    S     I  G     +  L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 287 YSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 341

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 342 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 401

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 402 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 460

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ +DP                     I P+IM+++MF Q  ++PPP D  QA ++  MP
Sbjct: 461 LSRSDPYY-------------------ILPVIMAVTMFAQTFLNPPPTDPMQAKMMKVMP 501

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           ++F      FPAGL++YW  +N+++I QQ  I +    
Sbjct: 502 LIFSAMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIDK 539


>gi|58698973|ref|ZP_00373828.1| 60 kd inner-membrane protein [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534513|gb|EAL58657.1| 60 kd inner-membrane protein [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 549

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 206/528 (39%), Positives = 318/528 (60%), Gaps = 15/528 (2%)

Query: 36  ERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM--SPRVELKNPSLIGSINLKGAQFDDLN 93
                Q + +  +  N  A ++  +R++ ++     RV L N  + GSI+LKGA+FDDL 
Sbjct: 13  STNQNQPLIEHIESFNDLAPIIHQNRSEIINSTREQRVSLTNNMIKGSISLKGARFDDLI 72

Query: 94  LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153
           L  YHL+ SS+SP V LLSP+ +K+ YFAE  ++  +N I++P+S  VW           
Sbjct: 73  LTNYHLEPSSSSPQVVLLSPAESKDVYFAEFGWLDPSNKIKVPDSKAVWRADKLN----Q 128

Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213
             + L + N N ILF   I+LD++Y+FK+   V NN+ D +   P G+I R +     + 
Sbjct: 129 KEVNLSWDNENGILFRMKINLDDNYMFKVEQVVENNTKDNVVLVPYGKINRKRDNINESY 188

Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFH 272
           +   EG +    +  L E  Y DI K   I       +W G +DKYW +V IP K    +
Sbjct: 189 WISHEGVLGAFDN-KLEEWTYKDISKKHLIKANTSEKNWFGFADKYWLTVIIPEKSDKIN 247

Query: 273 SQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
              K+ + +   ++Q  F  +  +ILPG S +  N+ FAGAK+   +  Y+  L IP F+
Sbjct: 248 VSIKHTNANDIDKFQVDFVKSYKSILPGASTSNVNYFFAGAKKLNLLDSYKDTLNIPLFD 307

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+G  YFI KP+F+L+ YF  ++ NFG+AI+L T+ +KLL  PL+ + YVS   +K+
Sbjct: 308 KAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKVKS 367

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +QP++  ++E +K    +   K  I L+K +N+NP++  +P+L+QIPVFFA+YKV+ +++
Sbjct: 368 LQPELTRVKELYKNDSLK-QHKETIALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTI 426

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS--- 508
           EMRHAPF+ WIKDL+A DPTNIFTLFG+  +  P  + +GI PII   +M IQ K+S   
Sbjct: 427 EMRHAPFFLWIKDLSAPDPTNIFTLFGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKD 484

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
               D  Q  ++ ++P + VF  SSFPAGL+IYW +SN+I+++QQ++I
Sbjct: 485 QTSKDDIQVNVMKFLPYISVFIFSSFPAGLVIYWIFSNIITLIQQSLI 532


>gi|237809901|ref|YP_002894341.1| 60 kDa inner membrane insertion protein [Tolumonas auensis DSM
           9187]
 gi|259515732|sp|C4LDZ4|OXAA_TOLAT RecName: Full=Inner membrane protein oxaA
 gi|237502162|gb|ACQ94755.1| 60 kDa inner membrane insertion protein [Tolumonas auensis DSM
           9187]
          Length = 549

 Score =  318 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 132/579 (22%), Positives = 235/579 (40%), Gaps = 53/579 (9%)

Query: 1   MERNWNYFVAIA--LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N  +     +S ++  +W                K        + V  S    + 
Sbjct: 1   MQPQRNLLLIGLLLVSFMLWQSWMVDKAP----------KTATPATAESSVPASSGGDVP 50

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           +    + +    + L++  L  +++  G    +  L        S+ P V L      + 
Sbjct: 51  NQNDASNAKHALLTLRSDVLELTVDTLGGDIVEAKLLKQTEAQGSDKPFVLL--EKKPQR 108

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVFKNANNILFERTISLD 175
            Y A+   +                  +            + + F +A   +F +   L 
Sbjct: 109 QYIAQSGLIGRDGVDNQAERPVYTANGTEFALVEGKDELVVPMTFTDAKGNVFTKRFVLK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
            E Y   +   V N S   +     G++ +       ++              S  EQ+Y
Sbjct: 169 RESYAVGVDYQVKNVSAQPLEIQFYGQLKQTIAAPEGSSTPGMMASAFHGAAYSSAEQRY 228

Query: 235 SDIEKSSISNFH----ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY----- 285
             +  S I            W G+   Y+ + +    +   H   K +S           
Sbjct: 229 EKVNFSDIGETKLDVATQAGWAGMLQHYFVTAWTGKADAQNHIYGKAVSVNADVKDSGEA 288

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
                    TI           L+ G K    +    +       ++ +D+G+ +FIA+P
Sbjct: 289 IIGIKLPLTTIAANSEAVVGTSLWIGPKLQDQMAAVAQ-----HLDLTVDYGYLWFIAQP 343

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+ + + LVGN+G+AI+L T+ V+ + +PL+K QY S A M+ +QPK+  LRE+   
Sbjct: 344 LFQLLQFLHGLVGNWGVAIILITMIVRGVMYPLSKAQYTSMAKMRLLQPKLTALRERLGD 403

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q + +AM++LYK   +NPL GC+P+L+Q+P+F A+Y  +  S+E+RHAPF  W+ DL
Sbjct: 404 -DRQKMSQAMMELYKEEKVNPLGGCFPLLIQMPIFIALYWTLMESVELRHAPFALWLTDL 462

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524
           +  DP                     + P++M  +M+   KMSP    D  Q  ++ +MP
Sbjct: 463 SVKDPYY-------------------VLPLLMGATMWYIQKMSPTTVTDPMQQKVMQFMP 503

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           +VF F    FP+GL +YW  SN+++I+QQ +I +    +
Sbjct: 504 IVFTFMFLWFPSGLTLYWVVSNIVTIIQQTLIFRQLEKK 542


>gi|261393238|emb|CAX50861.1| inner-membrane protein OxaA [Neisseria meningitidis 8013]
          Length = 545

 Score =  318 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 135/575 (23%), Positives = 232/575 (40%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q V    +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      N P +  L     +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRQLTLLKYKATGDENKPFI--LFGDGKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +      ++L       +  ++  +     YL
Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
             +   + N S      S   RI+R   +     +        +    + +  +  +SD+
Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +                      
Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGECSIDIKRRNDKL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A  S     I  G    T   L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRVAAPKLQAIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLY    INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PIIM+ +M  Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRADPYY-------------------ILPIIMAATMVAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|241759451|ref|ZP_04757555.1| inner membrane protein, 60 kDa [Neisseria flavescens SK114]
 gi|241320233|gb|EER56566.1| inner membrane protein, 60 kDa [Neisseria flavescens SK114]
          Length = 548

 Score =  317 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 144/575 (25%), Positives = 242/575 (42%), Gaps = 55/575 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A+SV I   W++F+  P+               Q      + AA     
Sbjct: 1   MDF-KRLMAFFAISVAIFAGWEHFFPSPKP-----------NPAQQAAQQQTAAAPAKAA 48

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              AL+ +  + +   ++   I+ K      L L  Y      + P V  L     +  Y
Sbjct: 49  AEAALAPASPITVTTDTVKAVIDEKSGDLRQLTLLQYKATGDEHKPFV--LFNDGKEYTY 106

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L   +         +      ++L     N +  ++  +     YL
Sbjct: 107 VAQSELLDAQGNNVLKGISFTAPQKQYSLEGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 166

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237
             I   +TN++   +  S   RI+R   +     +      G +    +    +  +SD+
Sbjct: 167 VNIRFDITNSNGQPVNLSADYRIVRDNSEPEGQGYFTRSYVGPVVYTPEGGFQKVSFSDL 226

Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S              WLG+ + ++ S +I   +                      
Sbjct: 227 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKDGQSVCSAGECNIDIKRRNDNL 286

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A  S    TI  G    T   L+AG +    I +        + ++  D+G  ++ A 
Sbjct: 287 YSASVSVPLATIQAGTKAETAINLYAGPQATSVIANIAD-----KLQLAKDYGKVHWFAS 341

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 342 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 401

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                V Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 402 D-DRMVQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 460

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+  DP                     I P+IM+++MF Q  ++PP  D  QA ++  MP
Sbjct: 461 LSRPDPFY-------------------ILPLIMAVTMFAQTYLNPPSTDPMQAKMMKIMP 501

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 502 LVFSIMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 536


>gi|71281074|ref|YP_271688.1| inner membrane protein, 60 kDa [Colwellia psychrerythraea 34H]
 gi|71146814|gb|AAZ27287.1| inner membrane protein, 60 kDa [Colwellia psychrerythraea 34H]
          Length = 543

 Score =  317 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 133/561 (23%), Positives = 249/561 (44%), Gaps = 36/561 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV-DNSYAAVLID 59
           ME      + IAL V+    +  +     +          Q+V+  +       +   + 
Sbjct: 1   MESQR-SLLFIALMVVTYLLFSQWQQQNAVVPEQTSISQNQSVENADADFVPESSDAQVS 59

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
                 + +  + +   +LI  IN +G    +  LR +  +  ++ P   L    N    
Sbjct: 60  SIKSTNTSAKLITVTTDTLILKINSQGGDIVEAKLRKFDTEQGNDIPFTIL---QNGNQK 116

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNANNILFERTISLDEH 177
           Y A+                 ++               + LVF + + +   +  + +++
Sbjct: 117 YIAQSGLTGANGIDRTIKGRPIYTSAKNSYELVNDNLIVDLVFHDVSGMSVTKRFTFNKN 176

Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            Y   +   + NN+ + +     G++ +                 A    +   E+   D
Sbjct: 177 SYSVNVDYLIDNNTANSVSVQMYGQLKQSTVVETGGGMLPTYRGAAYSTTEERYEKYDFD 236

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
             + +  N   +  W+ + + Y+ S ++P+ + S      Y ++  A     F A  + I
Sbjct: 237 DIEEANLNAVTAGGWIAMLEHYFVSAWVPNAKDSNQLYTTYSNNFEAV--IGFKAPAVII 294

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
             GK  +T+   +AG K+   +         P  ++ ID+G+ + I++P+F L+    + 
Sbjct: 295 DAGKQGSTSAIFYAGPKDQEVLEKIA-----PNLDLTIDYGFLWMISQPLFWLLLTIQSF 349

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           V N+G+AI++ T+ VK   +PL K QY S A M+++ PK+ +L+E+F     Q + +A +
Sbjct: 350 VTNWGVAIIIITLIVKGGMYPLTKAQYTSMAKMRDLAPKMAQLKERFGD-DRQKMSQATM 408

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           ++Y+   +NP  GC P++LQ+P+F A+Y V   S+E+RHAPF  WI+DL+A DP      
Sbjct: 409 EMYRKEKVNPAGGCLPLILQMPIFLALYWVFLESVELRHAPFVFWIQDLSAMDPFF---- 464

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535
                          + P++M +SM++  KM P    D  Q  I+ +MPVVF   ++ FP
Sbjct: 465 ---------------VLPVLMGISMYVMQKMQPMTIQDPMQQKIMQYMPVVFSIFMAWFP 509

Query: 536 AGLIIYWSWSNVISIVQQAVI 556
           +GL++YW  SN+ISI Q  +I
Sbjct: 510 SGLVLYWLVSNLISITQMKII 530


>gi|114332119|ref|YP_748341.1| 60 kDa inner membrane insertion protein [Nitrosomonas eutropha C91]
 gi|122313199|sp|Q0AE56|OXAA_NITEC RecName: Full=Inner membrane protein oxaA
 gi|114309133|gb|ABI60376.1| protein translocase subunit yidC [Nitrosomonas eutropha C91]
          Length = 622

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 152/592 (25%), Positives = 257/592 (43%), Gaps = 56/592 (9%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFY-------VYPRIEEMNNERKNIQTVKQPNQVD---- 50
             N    + I  S  +++ W  +          P +    N    +   K  + +     
Sbjct: 1   MDNKKIVLLIIFSTSLLFLWDAWVKEQEKFNAPPSVVAQANSAAGVTQSKNNDGLPIPGS 60

Query: 51  --------------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96
                          S          + L    ++ +    +I  I+  G     L L  
Sbjct: 61  ELTASQTGSDLNGIPSSGDTADSVTPRLLPSGEQIRVVTDKVIAEIDTMGGDLRRLELLQ 120

Query: 97  YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156
                  N P   L S ++      + L      N+  +    +               I
Sbjct: 121 QPSPEDENVPYSLLHSEASRTYVAQSGLVGEGLPNHKTVYQVESGIRNYELTAGEDKVVI 180

Query: 157 KLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNT 213
           +L+      +   +T +   + Y+  I   + N S   IR     +++R    P   T  
Sbjct: 181 RLLAPETQGVQVIKTYTFHRDSYVIDIGFEIANKSDATIRPFAYFQMLRDDTPPPAHTMM 240

Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFH 272
                G      ++   +  + D++K       + +N W+ + + Y+ + ++P ++T   
Sbjct: 241 IRSFLGAAVYTDEEKYQKIPFDDLDKGKTDYPANANNGWIAMLEHYFLTAWLPPQQTPRE 300

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
              K  SD    Y A        I  G+++TTT  L+AG +E   +         P  E+
Sbjct: 301 YFAKRQSDN--LYTAGVIVPAGVITAGETVTTTMPLYAGPEEQDRLAELA-----PGLEL 353

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
            +D+GW   IAKP+F L+S++++  GN+GIAI+L T+ VKLLFFPL+   Y S A ++ +
Sbjct: 354 TVDYGWLTMIAKPLFRLLSFYHSWTGNWGIAIILLTITVKLLFFPLSAAGYRSMAKLRLV 413

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
            PK+  +++++K    Q + +AM+  YKT  INP+ GC+PIL+QIPVF A+Y  I  ++E
Sbjct: 414 TPKLKRIQDQYKG-DRQRMHQAMMDFYKTEKINPMGGCFPILVQIPVFIALYWTILAAVE 472

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           +R+APF  WI DL++ DP                     + P+++ +SMFIQ +++P P 
Sbjct: 473 LRYAPFALWITDLSSPDPKY-------------------LLPVLLGISMFIQTRLNPTPT 513

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           D  QA I+  MPV F      FPAGL++Y   +N++SI QQ  I KM+G   
Sbjct: 514 DPIQAKIMQIMPVAFSAIFFFFPAGLVLYSLVNNILSIAQQWKITKMYGTAP 565


>gi|297520055|ref|ZP_06938441.1| putative inner membrane protein translocase component YidC
           [Escherichia coli OP50]
          Length = 517

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 129/517 (24%), Positives = 233/517 (45%), Gaps = 43/517 (8%)

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
              D    A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++
Sbjct: 15  SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETS 72

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFER 170
            +  Y A+             N       +               + + + +A    F +
Sbjct: 73  PQFIYQAQSGLTGRDGPDNPANGPRPMYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTK 132

Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVL 224
           T  L    Y   +   V N     +  S  G++ +         T ++ F +     A  
Sbjct: 133 TFVLKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAY 192

Query: 225 GDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                   + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+
Sbjct: 193 STPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGN 250

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
                 + +  + + PG++    + L+ G +    +         P  ++ +D+GW +FI
Sbjct: 251 GIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFI 305

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           ++P+F L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+
Sbjct: 306 SQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRER 365

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
                 Q + + M+ LYK   +NPL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI
Sbjct: 366 LGDDK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWI 424

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521
            DL+A DP                     I PI+M ++MF   KMSP    D  Q  I+ 
Sbjct: 425 HDLSAQDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMT 465

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +MPV+F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 466 FMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 502


>gi|238765480|ref|ZP_04626399.1| Inner membrane protein oxaA [Yersinia kristensenii ATCC 33638]
 gi|332163525|ref|YP_004300102.1| putative inner membrane protein translocase component YidC
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
 gi|238696304|gb|EEP89102.1| Inner membrane protein oxaA [Yersinia kristensenii ATCC 33638]
 gi|318608031|emb|CBY29529.1| inner membrane protein translocase component YidC, long form
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325667755|gb|ADZ44399.1| putative inner membrane protein translocase component YidC
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
          Length = 531

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 136/556 (24%), Positives = 236/556 (42%), Gaps = 54/556 (9%)

Query: 16  IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75
           +I  AWQ         +   +  N  T  + +Q                      + +K 
Sbjct: 1   MIWQAWQVDNNPQPAAQTTQQTANTATGDKASQAVPGS------------GQGQLITVKT 48

Query: 76  PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135
             L  +IN +G   +  NL  Y   + S+     L   +     Y A+      +     
Sbjct: 49  DVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFIYQAQSGLTGKSGPDNP 106

Query: 136 PNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL-FKIVDTVTNN 189
            N       +               I L F   +  +F +T  L  +     +   V N 
Sbjct: 107 ANGERPLFEVPQTSFVLADGQDELRIPLTFTGKDGSVFTKTFVLKRNDYAIGVDYHVKNA 166

Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQKY-SDIEKSSIS 243
           S   +  +  G++ +         T +N F +     A         +KY     +    
Sbjct: 167 SAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDETKYKKYSFSDIEDKSL 226

Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303
           +      W+ +  +Y+A+ +IP+      + F     G+      F    + I PG+   
Sbjct: 227 DITTKGGWVAMLQQYFATAWIPAANE--TNTFYSADLGNGLAAIGFKGAPVVIQPGEQKQ 284

Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363
               L+ G +    +         P  ++ +D+GW +FI++P+F L+ + ++ VGN+G +
Sbjct: 285 LGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFKLLKFIHSFVGNWGFS 339

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q + + M+ LYK   
Sbjct: 340 IIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMSQEMMALYKAEK 398

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A DP             
Sbjct: 399 VNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYY----------- 447

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
                   I PI+M ++M+   KMSP    D  Q  I+ +MPV+F      FPAGL++Y+
Sbjct: 448 --------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGLVLYY 499

Query: 543 SWSNVISIVQQAVIMK 558
             SN+++I+QQ +I +
Sbjct: 500 IVSNLVTILQQQLIYR 515


>gi|302880138|ref|YP_003848702.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Gallionella capsiferriformans ES-2]
 gi|302582927|gb|ADL56938.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Gallionella capsiferriformans ES-2]
          Length = 541

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 152/567 (26%), Positives = 245/567 (43%), Gaps = 37/567 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-YAAVLID 59
           M+     F+ +  S  ++  W  +  Y     +         +           A   I 
Sbjct: 1   MDFQR-LFLFLIFSFSLMMVWDGWQRYQNPPVVQQAATTKSDLPVATTKPTDLAAQAAII 59

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
            +A  +     +++K   L   IN  G     L+   +          V     S T N 
Sbjct: 60  QQAAKVETGKIIKVKTDFLEAEINSVGGDIQRLDFIKHLDGQDKTKQFVLFEKGSGTHN- 118

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178
           Y A+   + T   +    +       S ++      +KL    AN +   + ++     Y
Sbjct: 119 YIAQSGLLGTG--MPNHTTVFSAEQDSYQLTGDKLEVKLAAVAANGMKVVKLLTFHKSSY 176

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           +  +   + N +   I  S   +++R    P   +       G       +   +  +SD
Sbjct: 177 VVDVAYEIENTTAAPITTSAYFQLIRDSIDPAGGSKMVPTYTGMAVYTDKEKFQKIAFSD 236

Query: 237 IEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           +EK  I    E  N W+GI   Y+ + ++P  +TS     + L      Y A        
Sbjct: 237 VEKGKIDYPKEGDNGWIGILQHYFVAAWLPKDKTSREFFTRKLEG--DAYSAGVIVPVAA 294

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           I PG+    +  L+AG            D   P   + +D+GW   +A P+F  +++   
Sbjct: 295 IAPGQKAVVSMPLYAGP------AQSTLDSIAPGLGLTVDYGWLTVVATPIFWTLTFIQG 348

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           +V N+G+AI+L TV +KLLFFPL+   Y S A M+ + PK+++++ +      + L +AM
Sbjct: 349 MVQNWGVAIILLTVLIKLLFFPLSAASYRSMAKMRVVAPKLEKIKLQHADDREK-LNRAM 407

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           + LYKT  INPL GC P+L+QIPVF A+Y  I  S+EMR+APF+GWI DL+AADP     
Sbjct: 408 MDLYKTEKINPLGGCLPVLIQIPVFIALYWSILASVEMRNAPFFGWITDLSAADPFF--- 464

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
                           + P++M  SMF+Q K++P P D  QA I+  MP+ F      FP
Sbjct: 465 ----------------VLPVLMGASMFLQSKLNPVPPDPIQAKIMKIMPIAFSVVFFWFP 508

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGA 562
           AGL++Y   +N +SI QQ  I +    
Sbjct: 509 AGLVLYSIVNNALSIAQQWYITRSIEV 535


>gi|30248404|ref|NP_840474.1| 60Kd inner membrane protein [Nitrosomonas europaea ATCC 19718]
 gi|34098399|sp|P59810|OXAA_NITEU RecName: Full=Inner membrane protein oxaA
 gi|30138290|emb|CAD84298.1| 60Kd inner membrane protein [Nitrosomonas europaea ATCC 19718]
          Length = 614

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 145/591 (24%), Positives = 253/591 (42%), Gaps = 55/591 (9%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFY-------VYPRIEEMNNERKNIQTVKQPNQVDNSYA 54
             N    + I  S  +++ W  +          P I + ++   + Q+    +       
Sbjct: 1   MDNKKIVLLIIFSTSLLFLWDAWIKEQEKFNNPPAITQADSSAGSTQSRNDDSLPVPGSE 60

Query: 55  AVLIDDRAQA-----------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97
                                      L    ++ +    +I  I+  G     L L   
Sbjct: 61  LTSSQASPDTNGIPASGGNGDSVTPRLLPSGEQIRVVTDKVIAEIDTIGGDLRRLELLQQ 120

Query: 98  HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157
                 ++P   L S +       + L      N+     + +               I+
Sbjct: 121 PSSEDKDTPYALLYSEAARTYIAQSGLVGEGLPNHKTTFRAESDIRNYELSSGEDKIVIR 180

Query: 158 LVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTF 214
           L+   A  +   +T +   + Y+  +   V N     +R     +++R    P   T   
Sbjct: 181 LLAPEAQGVQVIKTYTFHRDSYVIDVGFEVENKGDATVRPFAYFQMLRDGNPPPAKTMMI 240

Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHS 273
               G      +    +  +SD++K+      + +N W+ + + Y+ + ++P ++T    
Sbjct: 241 PTFLGAAVYTEEGKYQKIPFSDLDKNKADYPANANNGWIAMLEHYFLTAWLPQQQTPREF 300

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
             K  SD    Y A        I PG+   TT   +AG +E   +         P  ++ 
Sbjct: 301 FAKRQSDN--LYSAGVIVPAGVIAPGEIAATTMPFYAGPEEQDNLEGLA-----PGLDLT 353

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+GW   IAKP+F L+S++++   N+G+AI+L T+ VKLLFFPL+   Y S A ++ + 
Sbjct: 354 VDYGWLTVIAKPLFRLLSFYHSWTDNWGVAIILLTMTVKLLFFPLSAAGYRSMAKLRLVT 413

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           PK+  +++++K    Q + +AM++ YK   INP+ GC+PIL+QIPVF A+Y  I  ++E+
Sbjct: 414 PKLKRIQDQYKG-DRQRMHQAMMEFYKEEKINPMGGCFPILVQIPVFIALYWTILAAVEL 472

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R+AP   WI DL++ DP  +                    P++M +SMF+Q K++P P D
Sbjct: 473 RYAPLALWIDDLSSPDPFYM-------------------LPLLMGISMFVQTKLNPTPTD 513

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
             QA I+  MPV F      FPAGL++Y   +N++SI QQ  I KM+G   
Sbjct: 514 PLQAKIMQIMPVAFSAIFFFFPAGLVLYSLVNNILSIAQQWKITKMYGTAP 564


>gi|78486534|ref|YP_392459.1| 60 kDa inner membrane insertion protein [Thiomicrospira crunogena
           XCL-2]
 gi|78364820|gb|ABB42785.1| protein translocase subunit yidC [Thiomicrospira crunogena XCL-2]
          Length = 551

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 138/575 (24%), Positives = 246/575 (42%), Gaps = 45/575 (7%)

Query: 4   NWNYFVAIALSVIIVYAWQNF--------YVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55
           N   F  +AL+  +++ W  +                     K ++T +    V  ++  
Sbjct: 2   NMRSFWWLALAFTLLWIWMQWTQFQHKASLPPQTAAVTQQTDKGMETPEINPDVPTAHQT 61

Query: 56  VLIDDRAQA-LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
           +     A+A +  + R+ +K   L   I+ +G    D+ L  Y      + P   +    
Sbjct: 62  MEDVPTAKAKIKQAQRISVKTDVLDIVIDTQGGDIRDVKLLKYAATDDRSQPFRLM--GD 119

Query: 115 NTKNAYFAELDYVSTAN---NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
             +  Y A+      +          S    +    ++   T  + L ++     + +  
Sbjct: 120 TGQMMYVAQNGIALQSKAVLPAPTHKSLYQASQTHYEMTGDTLTVPLTWEQDGVKVTKTY 179

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG---FIAVLGDKS 228
           +     Y+  +   + N +  +       +++R+      N                +  
Sbjct: 180 VFTKGKYVIGLNYKIDNTTQKEWAGGLYSQLVRNTYDPDHNAMMYTYTGPVLYDGHAESK 239

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             +  + D+ K  I     +  W  +   Y+ S  IP +E+      K L+DG   Y A 
Sbjct: 240 YNKHSFDDLSKQPIQGIQTTGGWAAMIQHYFMSAVIPDQESQNRYYAKPLNDGE--YVAG 297

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                 T+  G+S T ++ L+ G      +         P  E+ +D+G    IA+P+F 
Sbjct: 298 VVEPMETVAAGQSQTLSSELYIGPIIQDNLEKIA-----PGLELTVDYGVLTIIAEPIFW 352

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           ++   + LVGN+G +I+L TV +KLLF+ L++  Y S A +K  QPK+ +L+E +     
Sbjct: 353 VLEKIHALVGNWGWSIILLTVLIKLLFYKLSETSYRSMARLKKFQPKLKQLKENYGDDKV 412

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
            + Q+ M++LYK   INPL GC PIL+Q+PVF A+Y V+  S EMR AP+  WI DL+  
Sbjct: 413 -IFQQKMMKLYKEEKINPLGGCLPILVQMPVFIALYWVLLYSAEMRQAPWILWIDDLSVK 471

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVF 527
           DP                     I P++M +SM++Q K++P    D+ Q  ++  +P +F
Sbjct: 472 DPYF-------------------ILPVLMGISMWVQQKLNPSAMMDEMQQKVMKALPFIF 512

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
                 FPAGL++YW  +N++S+ QQ  I +   A
Sbjct: 513 TIFFMFFPAGLVLYWVVNNILSVSQQWYITRKIEA 547


>gi|194367815|ref|YP_002030425.1| putative inner membrane protein translocase component YidC
           [Stenotrophomonas maltophilia R551-3]
 gi|254778165|sp|B4SPG0|OXAA_STRM5 RecName: Full=Inner membrane protein oxaA
 gi|194350619|gb|ACF53742.1| 60 kDa inner membrane insertion protein [Stenotrophomonas
           maltophilia R551-3]
          Length = 571

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 141/589 (23%), Positives = 251/589 (42%), Gaps = 56/589 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM-----------NNERKNIQTVKQPNQV 49
           M +   + +   L V ++  W  +                     +            QV
Sbjct: 1   MNQTRVFLIFAWLMVAVLL-WMEWSREKAAPTPAPTTTSAPAAAQSVPGATPGSVPNAQV 59

Query: 50  DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
             +     +  +A A   S RV +    L   ++  G +  D  L  +       SP V 
Sbjct: 60  PGAPGQAAVQAQASATPASQRVTVTTDVLRLVLD--GGRVLDAELLQFPQTKDEGSPPVR 117

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNAN 164
           LL+  +  + Y A   + S   N  +P ++    +   K            I  V+   +
Sbjct: 118 LLT-EDPAHPYSAISGWASEDKNTPVPGADGFKLVGDTKDFVLAKGQNELQIPFVWTADS 176

Query: 165 NILFERTISLDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEG 219
            +  +RT+++  +    +  D V+N             + R     + +          G
Sbjct: 177 GVTIKRTLTVSRNEYAVRFKDEVSNTGAAPWNGYVYRTLDRTPTILSRSMTNPDSFSFNG 236

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                 DK    + + D  +    N + +  WL +   ++ + +IP K+ + H     ++
Sbjct: 237 ATWYDNDKKYQRRAFKDYLEDGTLNQNITGGWLAMLQHHFFTAWIPQKDQTAHYVLSQVA 296

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
               R   +      T+ PG+S +T   L+ G K    I        +P  + ++D+  F
Sbjct: 297 G---RDLIEARGPAFTVAPGQSTSTEARLWVGPKLVNLIAKE----DVPGLDRVVDYSRF 349

Query: 340 YFIA---KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
             +A   + +F +++  + LVGN+G AI+   V +KL+ +PL+  QY S A M+  QP+I
Sbjct: 350 SMMAVIGQGLFWVLNQVHKLVGNWGWAIVGLVVLLKLVLYPLSATQYKSGAKMRRFQPRI 409

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
            +L+E++     Q  Q AM++LYK   INP+ GC PIL+Q+P+FFA+Y V+  S+E+R A
Sbjct: 410 AQLKERYGD-DRQKFQTAMMELYKKEKINPMGGCLPILIQMPIFFALYWVLVESVELRQA 468

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKG 515
           P++GWI+DL A DP                     I P+I    M+   K++P P  D  
Sbjct: 469 PWFGWIQDLTARDPYF-------------------ILPVINVAVMWFTQKLTPAPGMDPM 509

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           Q  ++ +MP+VF   ++  P+GL++YW  +  + ++QQ  + K HG E 
Sbjct: 510 QQKMMQFMPLVFGVMMAFMPSGLVLYWVVNGGLGLLQQWWMTKRHGGEP 558


>gi|303256374|ref|ZP_07342388.1| inner membrane protein OxaA [Burkholderiales bacterium 1_1_47]
 gi|331001500|ref|ZP_08325118.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Parasutterella excrementihominis YIT 11859]
 gi|302859865|gb|EFL82942.1| inner membrane protein OxaA [Burkholderiales bacterium 1_1_47]
 gi|329568229|gb|EGG50046.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Parasutterella excrementihominis YIT 11859]
          Length = 565

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 143/582 (24%), Positives = 246/582 (42%), Gaps = 47/582 (8%)

Query: 2   ERNWNYF-VAIALSVIIVY-AWQNFYVYPRIE-EMNNERKNIQTVKQPNQVDNSYAAVLI 58
           +       +   LS  ++Y  W+ +   P        +    +  K    + +      +
Sbjct: 4   DIQRALLWILFGLSAFMLYDRWEVYNGRPSFFGAETQQVATTEAPKNEAALPSQSQTASL 63

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV--------------SSN 104
              A+    +  ++++   L  S + +GA      LR     +               + 
Sbjct: 64  PAEAKTAVKAEPIQVETDLLKLSFDPEGAVIIGSELRKEKQTIPWTDTGLVGMILGNKAE 123

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
           +P   +L        Y A+   +             V   +          +K   ++  
Sbjct: 124 TPADVVLFTEQKGRTYLAQTGLIGGPYPTHKTQFKLVPGPLKMADGQDNLTVKFEGESGG 183

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIA 222
             + +       HY  K+   V NN+  +I+ S   ++ R    P+  +       G   
Sbjct: 184 VKVIKSFTFERGHYGIKVSHEVVNNTASEIKPSVYYQLTRDGEKPEGESTMVNAYTGAAV 243

Query: 223 VLGDKSLVEQKYSDIEK-SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281
                   +  +SDI            N W+ +   Y+ S ++P++     +    +  G
Sbjct: 244 YTDKDKFQKVSFSDIADGDKDFQAKADNGWIAMIQHYFVSAWVPTQGVERENYTNTV--G 301

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
              Y         TI P  S T    L++G ++   +         P   +++D+GW  F
Sbjct: 302 EKLYAVGSIQQMDTIAPNSSKTIEATLYSGPQDQTRLDAIA-----PGLSLVVDYGWLTF 356

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           +AKP++ L+S+ Y +VGN+G AI+L T  VK + +PL+   Y S A MK++ P++  L+E
Sbjct: 357 LAKPIYWLLSFLYGIVGNWGWAIVLLTCIVKAILYPLSLAGYRSMAKMKDLGPRMKALKE 416

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           K+     Q L  AM+++YKT  INP+ GC PI LQ+PVF A+Y V+  S+E+R AP+  W
Sbjct: 417 KYGDDK-QRLNMAMMEMYKTEKINPVGGCLPIALQLPVFLALYWVLLASVELRDAPWIFW 475

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
           + DLAA DP                     I PI+M ++M IQ K++P P D  QA ++ 
Sbjct: 476 VTDLAAPDPWF-------------------ILPILMIITMVIQFKLNPTPPDPVQAKMMA 516

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            MP VF      F +GL++YW  +N++SI+QQ V+ K   A+
Sbjct: 517 IMPFVFGIMFIFFASGLVLYWLVNNILSIIQQYVVNKQIEAD 558


>gi|296314151|ref|ZP_06864092.1| membrane protein insertase, YidC/Oxa1 family [Neisseria
           polysaccharea ATCC 43768]
 gi|296839184|gb|EFH23122.1| membrane protein insertase, YidC/Oxa1 family [Neisseria
           polysaccharea ATCC 43768]
          Length = 545

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 140/575 (24%), Positives = 242/575 (42%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q V    +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y  + + N P    L   + +  Y
Sbjct: 56  ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKANGNENKPFS--LFDDSKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L   N         +      ++L     N +  ++  +   + YL
Sbjct: 104 VAQSELLDAQGNNILKGVNFTAAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237
             +   +TN S      S   RI+R   Q     +      G +    +    +  +SD+
Sbjct: 164 VNVRFDITNTSGKPANLSADYRIVRDHSQPEGQGYFTRSYLGPVVYTPEDKFQKVSFSDL 223

Query: 238 EKSSISNFHE-------SNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S  +E          WLG+ + ++ S +I   +           +          
Sbjct: 224 DDDAKSGKNEAEYARKTQTGWLGMIEHHFMSAWILQPKGGQSVCAAGDCRIDIKRRNDNL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y    S     I  G     +  L+AG +    I +        + ++  D+G  ++ A 
Sbjct: 284 YSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIAD-----KLQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ ADP                     I PIIM+ +MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           ++F      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LIFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|238759578|ref|ZP_04620740.1| Inner membrane protein oxaA [Yersinia aldovae ATCC 35236]
 gi|238702237|gb|EEP94792.1| Inner membrane protein oxaA [Yersinia aldovae ATCC 35236]
          Length = 531

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 129/507 (25%), Positives = 224/507 (44%), Gaps = 42/507 (8%)

Query: 65  LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124
                 + +K   L  +IN +G   +  NL  Y   + S+     L   +     Y A+ 
Sbjct: 38  SGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFVYQAQS 95

Query: 125 DYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL 179
                +      N                       I L F   +  +F +T  L  +  
Sbjct: 96  GLTGKSGPDNPANGERPLFETPQTSFVLADGQDELRIPLTFTGKDGSVFIKTFVLKRNDY 155

Query: 180 -FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQK 233
              +   V N S   +  +  G++ +         T +N F +     A         +K
Sbjct: 156 AIGVDYHVKNASAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDETKYKK 215

Query: 234 Y-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
           Y     +    +      W+ +  +Y+A+ +IP+      + F     G+      F   
Sbjct: 216 YSFSDIEDKSLDITTKGGWVAMLQQYFATAWIPTANE--TNTFYSADLGNGLAAIGFKGA 273

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
            + I PG++      L+ G +    +         P  ++ +D+GW +FI++P+F L+ +
Sbjct: 274 PVVIQPGEAKQLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFKLLKF 328

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
            ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q + 
Sbjct: 329 IHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMS 387

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           + M+ LYK   +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A DP  
Sbjct: 388 QEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYY 447

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531
                              I PI+M ++M+   KMSP    D  Q  I+ +MPV+F    
Sbjct: 448 -------------------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFF 488

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558
             FPAGL++Y+  SN+++I+QQ +I +
Sbjct: 489 LWFPAGLVLYYIVSNLVTILQQQLIYR 515


>gi|149925381|ref|ZP_01913645.1| 60 kDa inner membrane insertion protein [Limnobacter sp. MED105]
 gi|149825498|gb|EDM84706.1| 60 kDa inner membrane insertion protein [Limnobacter sp. MED105]
          Length = 558

 Score =  316 bits (809), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 135/528 (25%), Positives = 230/528 (43%), Gaps = 32/528 (6%)

Query: 34  NNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93
           +      Q V        +    +    A+A   +  + +K   L    + +GAQ     
Sbjct: 50  SAANDLPQAVAPTAGDVPADPNAIAPSIAEAAPAAQTITVKTDVLELQFSSQGAQLITSK 109

Query: 94  LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153
           L  +    + + P+      SN      A L  V  A N          +          
Sbjct: 110 LLNHPAAENPDLPVQLFEQTSNRTYVGQAGLVGVPDAPNHRTLFELVSGS-TEFAPGQDQ 168

Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ--TAT 211
             +     +               Y   +V    N  ++ +  S   +I R      + +
Sbjct: 169 LKLVFKATSGGIENTTTYTIFKNRYDIDLVINARNTGVEPVSPSAYVQITRDGNPLESDS 228

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETS 270
           + +    G      +K   +  + DI   S        + WL +   Y+ S  +      
Sbjct: 229 SLYATFTGPAVYTPEKKYQKIDFEDIADRSADYVKTADSGWLAMIQHYFVSAIVGQDGPR 288

Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
            +            Y     ++  T+ P ++ T T  L+ G ++   +         P  
Sbjct: 289 ENYT---RQVDSNLYSIGLVSSLGTLAPEQTATYTAKLYTGPQDQSVLEALS-----PGL 340

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++++D+GW   IA+P++ L+   ++ +GN+G AI++ T+ +KL+FFPL+   Y S A M+
Sbjct: 341 DLVVDYGWLTVIAQPIYWLLEKIHSYIGNWGWAIVVLTILIKLVFFPLSAASYKSMAKMR 400

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            + P++ +L+E++        Q+AM+++YK   INPL GC PIL+QIPVF A+Y V+  S
Sbjct: 401 KVGPRMQKLKEQYGDDK-MGFQRAMMEMYKREKINPLGGCMPILIQIPVFIALYWVLLAS 459

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +EMR+AP+ GW+ DLAA DP                     I P+IM+++MFIQ +++P 
Sbjct: 460 VEMRNAPWLGWVTDLAAPDPFY-------------------ILPVIMAVTMFIQTRLNPT 500

Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           P D  QA I+  MP+VF      FPAGL++YW  +N++SI QQ VI +
Sbjct: 501 PPDPVQAKIMMIMPLVFSVMFIFFPAGLVLYWVVNNILSIAQQWVITR 548


>gi|309784245|ref|ZP_07678884.1| inner membrane protein oxaA [Shigella dysenteriae 1617]
 gi|308927752|gb|EFP73220.1| inner membrane protein oxaA [Shigella dysenteriae 1617]
 gi|315618589|gb|EFU99175.1| inner membrane protein oxaA [Escherichia coli 3431]
 gi|320180047|gb|EFW54989.1| Inner membrane protein translocase component YidC, long form
           [Shigella boydii ATCC 9905]
 gi|323173324|gb|EFZ58953.1| inner membrane protein oxaA [Escherichia coli LT-68]
 gi|332084895|gb|EGI90078.1| inner membrane protein oxaA [Shigella boydii 5216-82]
 gi|332345696|gb|AEE59030.1| inner membrane protein OxaA [Escherichia coli UMNK88]
          Length = 531

 Score =  316 bits (809), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 134/554 (24%), Positives = 243/554 (43%), Gaps = 52/554 (9%)

Query: 19  YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78
             WQ +           ++      +Q  Q   + A    D    A      + +K   L
Sbjct: 1   MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51

Query: 79  IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138
             +IN +G   +   L  Y  +++S  P   L   ++ +  Y A+             N 
Sbjct: 52  DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109

Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192
                 +               + + + +A    F +T  L    Y   +   V N    
Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169

Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245
            +  S  G++ +         T ++ F +     A          + K+  I  +   N 
Sbjct: 170 PLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229

Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305
                W+ +  +Y+A+ +IP  + + +  F   + G+      + +  + + PG++    
Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTGAMN 287

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           + L+ G +    +         P  ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+
Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
           + T  V+ + +PL K QY S A M+ +QPKI  +RE+      Q + + M+ LYK   +N
Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           PL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A DP               
Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
                 I PI+M ++MF   KMSP    D  Q  I+ +MPV+F      FP+GL++Y+  
Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502

Query: 545 SNVISIVQQAVIMK 558
           SN+++I+QQ +I +
Sbjct: 503 SNLVTIIQQQLIYR 516


>gi|110807605|ref|YP_691125.1| putative inner membrane protein translocase component YidC
           [Shigella flexneri 5 str. 8401]
 gi|110617153|gb|ABF05820.1| 60 kDa inner-membrane protein [Shigella flexneri 5 str. 8401]
 gi|332750697|gb|EGJ81105.1| inner membrane protein oxaA [Shigella flexneri 4343-70]
 gi|332764076|gb|EGJ94313.1| inner-membrane protein insertion factor [Shigella flexneri 2930-71]
 gi|332996038|gb|EGK15665.1| inner membrane protein oxaA [Shigella flexneri VA-6]
 gi|332997270|gb|EGK16886.1| inner membrane protein oxaA [Shigella flexneri K-218]
 gi|332997871|gb|EGK17479.1| inner membrane protein oxaA [Shigella flexneri K-272]
 gi|333013180|gb|EGK32553.1| inner membrane protein oxaA [Shigella flexneri K-304]
 gi|333013666|gb|EGK33031.1| inner membrane protein oxaA [Shigella flexneri K-227]
          Length = 531

 Score =  316 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 134/554 (24%), Positives = 243/554 (43%), Gaps = 52/554 (9%)

Query: 19  YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78
             WQ +           ++      +Q  Q   + A    D    A      + +K   L
Sbjct: 1   MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51

Query: 79  IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138
             +IN +G   +   L  Y  +++S  P   L   ++ +  Y A+             N 
Sbjct: 52  DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109

Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192
                 +               + + + +A    F +T  L    Y   +   V N    
Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169

Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245
            +  S  G++ +         T ++ F +     A          + K+  I  +   N 
Sbjct: 170 PLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229

Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305
                W+ +  +Y+A+ +IP  + + +  F   + G+      + +  + + PG++    
Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIVAIGYKSQPVLVQPGQTGAMN 287

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           + L+ G +    +         P  ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+
Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
           + T  V+ + +PL K QY S A M+ +QPKI  +RE+      Q + + M+ LYK   +N
Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           PL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A DP               
Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
                 I PI+M ++MF   KMSP    D  Q  I+ +MPV+F      FP+GL++Y+  
Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502

Query: 545 SNVISIVQQAVIMK 558
           SN+++I+QQ +I +
Sbjct: 503 SNLVTIIQQQLIYR 516


>gi|238787832|ref|ZP_04631629.1| Inner membrane protein oxaA [Yersinia frederiksenii ATCC 33641]
 gi|238724175|gb|EEQ15818.1| Inner membrane protein oxaA [Yersinia frederiksenii ATCC 33641]
          Length = 531

 Score =  316 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 129/507 (25%), Positives = 223/507 (43%), Gaps = 42/507 (8%)

Query: 65  LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124
                 + +K   L  +IN +G   +  NL  Y   + S+     L   +     Y A+ 
Sbjct: 38  SGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFIYQAQS 95

Query: 125 DYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL 179
                +      N       +               I L F   +  +F +T  L  +  
Sbjct: 96  GLTGKSGPDNPANGERPLFEVPQTSFILADGQDELRIPLTFTGKDGSVFTKTFLLKRNDY 155

Query: 180 -FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQK 233
              +   V N S   +  +  G++ +         T +N F +     A         +K
Sbjct: 156 AIGVDYHVKNASEAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDETKYKK 215

Query: 234 Y-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
           Y     +           W+ +  +Y+A+ +IP+      + F     G+      F   
Sbjct: 216 YSFSDIEDKSLEITTKGGWVAMLQQYFATAWIPTANE--TNTFYSADLGNGLAAIGFKGT 273

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
            + I PG+       L+ G +    +         P  ++ +D+GW +FI++P+F L+ +
Sbjct: 274 PVVIQPGEQKQLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFKLLKF 328

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
            ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q + 
Sbjct: 329 IHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMS 387

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           + M+ LYK   +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A DP  
Sbjct: 388 QEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYY 447

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531
                              I PI+M ++M+   KMSP    D  Q  I+ +MPV+F    
Sbjct: 448 -------------------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFF 488

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558
             FPAGL++Y+  SN+++I+QQ +I +
Sbjct: 489 LWFPAGLVLYYIVSNLVTILQQQLIYR 515


>gi|254521534|ref|ZP_05133589.1| inner membrane protein OxaA [Stenotrophomonas sp. SKA14]
 gi|219719125|gb|EED37650.1| inner membrane protein OxaA [Stenotrophomonas sp. SKA14]
          Length = 571

 Score =  316 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 141/589 (23%), Positives = 248/589 (42%), Gaps = 56/589 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M +   + +   L V ++  W  +              +     Q     +  A      
Sbjct: 1   MNQTRVFLIFAWLMVAVLL-WMEWSREKAAPTPAPTTTSAPAAAQSVPGSSPGAIPSAQV 59

Query: 61  R-----------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
                       A A   S RV +    L   ++  G +  D  L  +       SP V 
Sbjct: 60  PGAPGQAAVQAQASATPASQRVTVTTDVLRLVLD--GGRVLDAELLQFPQTKDEGSPPVR 117

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNAN 164
           LL+  +  + Y A   + S   N  +P ++    +                I  V+   N
Sbjct: 118 LLT-EDPAHPYSAISGWASEDKNTPVPGADGFKLVGDTNDFVLAKGQNELQIPFVWTADN 176

Query: 165 NILFERTISLDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEG 219
            +  +RT+++  +    +  D V+N             + R     + +          G
Sbjct: 177 GVTIKRTLTVSRNEYAVRFKDEVSNTGTAPWNGYVYRTLDRTPTILSRSMTNPDSFSFNG 236

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                 DK    + + D  +    N + +  WL +   ++ + +IP K+ + H     ++
Sbjct: 237 ATWYDNDKKYQRRAFKDYLEDGTLNQNITGGWLAMLQHHFFTAWIPQKDQTAHYVLSQVA 296

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
               R   +      T+ PG+S +T   L+ G K    I        +P  + ++D+  F
Sbjct: 297 G---RDLIEARGPAFTVAPGQSTSTEARLWVGPKLVNLIAKE----DVPGLDRVVDYSRF 349

Query: 340 YFIA---KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
             +A   + +F +++  + LVGN+G AI+   V +KL+ +PL+  QY S A M+  QP+I
Sbjct: 350 SMMAVIGQGLFWVLNQVHKLVGNWGWAIVGLVVLLKLVLYPLSATQYKSGAKMRRFQPRI 409

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
            +L+E++     Q  Q AM++LYK   INP+ GC PIL+Q+P+FFA+Y V+  S+E+R A
Sbjct: 410 AQLKERYGD-DRQKFQTAMMELYKKEKINPMGGCLPILIQMPIFFALYWVLVESVELRQA 468

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKG 515
           P++GWI+DL A DP                     I P+I    M+   K++P P  D  
Sbjct: 469 PWFGWIQDLTARDPYF-------------------ILPVINVAVMWFTQKLTPAPGMDPM 509

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           Q  ++ +MP+VF   ++  P+GL++YW  +  + ++QQ  + K HG E 
Sbjct: 510 QQKMMQFMPLVFGVMMAFMPSGLVLYWVVNGGLGLLQQWWMTKRHGGEP 558


>gi|73543142|ref|YP_297662.1| putative inner membrane protein translocase component YidC
           [Ralstonia eutropha JMP134]
 gi|123623711|sp|Q46VL6|OXAA_RALEJ RecName: Full=Inner membrane protein oxaA
 gi|72120555|gb|AAZ62818.1| protein translocase subunit yidC [Ralstonia eutropha JMP134]
          Length = 555

 Score =  316 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 145/579 (25%), Positives = 236/579 (40%), Gaps = 50/579 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAW----------QNFYVYPRIEEMNNERKNIQTVKQPNQVD 50
           M+      + +  S+ +V  +            F+     ++  +            + +
Sbjct: 1   MDI-KRTILWVIFSMSLVLLYDNWQRANGHASMFFPSATQQQAASAPAASAAQGDVPKAN 59

Query: 51  NSYAAVLIDDRAQALS-----MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
            +  A        A          ++ +    +   I+  G     L L   H     + 
Sbjct: 60  ATAGAAAPAAPGGAPQAAAQPTGEKIIVTTDEVRAEIDTAGGILSRLELLNEHE---KDG 116

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             V L    +T   Y A    +   +        T               + L       
Sbjct: 117 KPVVLF-ERDTTRTYMARSGLIG-GDLPNHTTVFTATPGPRTLDGADKLEVTLTADKNGV 174

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQEGFIAVL 224
              +  +     Y+      VTN+    +  +    + R   +   + F     G     
Sbjct: 175 KFVKTYVFHKGSYVVDARFAVTNDGTAPVSPTLYMELARDGSKVEQSQFYSTFTGPAIYT 234

Query: 225 GDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
                 +  + DI K   S     ++ W+ +   Y+AS +IP         F        
Sbjct: 235 DADKYHKITFDDIAKGKASTPAATTSGWVAMVQHYFASAWIPQAGKEH--SFYVQQIDPN 292

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            Y+         I PG ++TT   LFAG +E   +         P  E++ D+GW   +A
Sbjct: 293 LYRVGIQQPLGQIAPGATVTTDARLFAGPQEERMLEKIT-----PGLELVKDYGWLTILA 347

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP+F L+   +  + N+G +I+  TV +KL+FFPL+   Y S   MK++QP++  +RE+ 
Sbjct: 348 KPLFWLLEKLHGFLNNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIRERH 407

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
           K   PQ +   M+ LYKT  +NPL GC PI++QIPVF A+Y V+  S+EMR AP+ GWI 
Sbjct: 408 KG-DPQKMNAEMMALYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIH 466

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DL+  DP                     I PI+M++SMF+Q +++P P D  QA ++  M
Sbjct: 467 DLSVPDPFY-------------------ILPIVMAVSMFVQTRLNPTPPDPVQAKVMMIM 507

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           P+VF F    FPAGL++YW  +N++SI QQ  I +M G 
Sbjct: 508 PLVFSFMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGK 546


>gi|238750292|ref|ZP_04611794.1| Inner membrane protein oxaA [Yersinia rohdei ATCC 43380]
 gi|238711525|gb|EEQ03741.1| Inner membrane protein oxaA [Yersinia rohdei ATCC 43380]
          Length = 531

 Score =  316 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 136/556 (24%), Positives = 236/556 (42%), Gaps = 54/556 (9%)

Query: 16  IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75
           +I  AWQ         +   +  N  T  + +Q                      + +K 
Sbjct: 1   MIWQAWQVDNNPQPAAQTTQQTANTATGDKASQAVPGS------------GQGQLITVKT 48

Query: 76  PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135
             L  +IN +G   D  NL  Y   + S+     L   +     Y A+            
Sbjct: 49  DVLSLTINTRGGDIDQANLLAYPDALGSDKTFELL--ETTPGFIYQAQSGLTGKNGPDNP 106

Query: 136 PNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL-FKIVDTVTNN 189
            N       +               I + F   +  +F +T  L  +     +   V N 
Sbjct: 107 ANGERPLFEVPQTSFVLADGQDELRIPMTFTGKDGSVFIKTFVLKRNDYAIGVDYHVKNA 166

Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQKY-SDIEKSSIS 243
           S   +  +  G++ +         T +N F +     A         +KY     +    
Sbjct: 167 SEAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAFSSDETKYKKYSFSDIEDKNL 226

Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303
           +      W+ +  +Y+A+ +IP+      + F     G+      F    + I PG+   
Sbjct: 227 DITTKGGWVAMLQQYFATAWIPTANE--TNTFYSADLGNGLAAIGFKGAPVVIQPGEQKQ 284

Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363
            +  L+ G +    +         P  ++ +D+GW +FI++P+F L+ + ++ VGN+G +
Sbjct: 285 LSATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFKLLKFIHSFVGNWGFS 339

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q + + M+ LYK   
Sbjct: 340 IIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMSQEMMALYKAEK 398

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A DP             
Sbjct: 399 VNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFIWWIHDLSAQDPYY----------- 447

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
                   I PI+M ++M+   KMSP    D  Q  I+ +MPV+F      FPAGL++Y+
Sbjct: 448 --------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGLVLYY 499

Query: 543 SWSNVISIVQQAVIMK 558
             SN+++I+QQ +I +
Sbjct: 500 IVSNLVTILQQQLIYR 515


>gi|293417177|ref|ZP_06659804.1| inner membrane protein oxaA [Escherichia coli B185]
 gi|293464029|ref|ZP_06664443.1| inner membrane protein oxaA [Escherichia coli B088]
 gi|312972003|ref|ZP_07786177.1| inner membrane protein oxaA [Escherichia coli 1827-70]
 gi|291321661|gb|EFE61097.1| inner membrane protein oxaA [Escherichia coli B088]
 gi|291431208|gb|EFF04201.1| inner membrane protein oxaA [Escherichia coli B185]
 gi|310334380|gb|EFQ00585.1| inner membrane protein oxaA [Escherichia coli 1827-70]
 gi|320191195|gb|EFW65845.1| Inner membrane protein translocase component YidC, long form
           [Escherichia coli O157:H7 str. EC1212]
 gi|320193748|gb|EFW68381.1| Inner membrane protein translocase component YidC, long form
           [Escherichia coli WV_060327]
 gi|323164683|gb|EFZ50478.1| inner membrane protein oxaA [Shigella sonnei 53G]
 gi|323182500|gb|EFZ67904.1| inner membrane protein oxaA [Escherichia coli 1357]
 gi|323189560|gb|EFZ74840.1| inner membrane protein oxaA [Escherichia coli RN587/1]
 gi|325499510|gb|EGC97369.1| putative inner membrane protein translocase component YidC
           [Escherichia fergusonii ECD227]
 gi|326337246|gb|EGD61081.1| Inner membrane protein translocase component YidC, long form
           [Escherichia coli O157:H7 str. 1044]
 gi|326341617|gb|EGD65406.1| Inner membrane protein translocase component YidC, long form
           [Escherichia coli O157:H7 str. 1125]
          Length = 531

 Score =  316 bits (808), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 134/554 (24%), Positives = 243/554 (43%), Gaps = 52/554 (9%)

Query: 19  YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78
             WQ +           ++      +Q  Q   + A    D    A      + +K   L
Sbjct: 1   MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51

Query: 79  IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138
             +IN +G   +   L  Y  +++S  P   L   ++ +  Y A+             N 
Sbjct: 52  DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109

Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192
                 +               + + + +A    F +T  L    Y   +   V N    
Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169

Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245
            +  S  G++ +         T ++ F +     A          + K+  I  +   N 
Sbjct: 170 PLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229

Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305
                W+ +  +Y+A+ +IP  + + +  F   + G+      + +  + + PG++    
Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTGAMN 287

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           + L+ G +    +         P  ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+
Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
           + T  V+ + +PL K QY S A M+ +QPKI  +RE+      Q + + M+ LYK   +N
Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           PL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A DP               
Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
                 I PI+M ++MF   KMSP    D  Q  I+ +MPV+F      FP+GL++Y+  
Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502

Query: 545 SNVISIVQQAVIMK 558
           SN+++I+QQ +I +
Sbjct: 503 SNLVTIIQQQLIYR 516


>gi|238793138|ref|ZP_04636766.1| Inner membrane protein oxaA [Yersinia intermedia ATCC 29909]
 gi|238727511|gb|EEQ19037.1| Inner membrane protein oxaA [Yersinia intermedia ATCC 29909]
          Length = 529

 Score =  316 bits (808), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 129/507 (25%), Positives = 222/507 (43%), Gaps = 42/507 (8%)

Query: 65  LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124
                 + +K   L  +IN +G   +  NL  Y   + S+     L   +     Y A+ 
Sbjct: 38  SGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFVYQAQS 95

Query: 125 DYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL 179
                +      N                       I L F   +  +F +T  L  +  
Sbjct: 96  GLTGKSGPDNPANGERPLFEAPQTSFVLADGQDELRIPLTFTGKDGSVFTKTFVLKRNDY 155

Query: 180 -FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQK 233
              +   V N S   +  +  G++ +         T +N F +     A         +K
Sbjct: 156 AIGVDYHVKNASAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDDTKYKK 215

Query: 234 Y-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
           Y     +    +      W+ +  +Y+A+ +IP       + F     G+      F   
Sbjct: 216 YSFSDIEDKNMDITTKGGWVAMLQQYFATAWIPVANE--TNTFYSSDLGNGLAAIGFKGA 273

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
            + I PG+       L+ G +    +         P  ++ +D+GW +FI++P+F L+ +
Sbjct: 274 PVIIQPGEQKQLGATLWVGPEIQDKMAVIA-----PHLDLTVDYGWLWFISQPLFKLLKF 328

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
            ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q + 
Sbjct: 329 IHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMS 387

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           + M+ LYK   +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A DP  
Sbjct: 388 QEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYY 447

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531
                              I PI+M ++M+   KMSP    D  Q  I+ +MPV+F    
Sbjct: 448 -------------------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFF 488

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558
             FPAGL++Y+  SN+++I+QQ +I +
Sbjct: 489 LWFPAGLVLYYIVSNLVTILQQQLIYR 515


>gi|320174821|gb|EFW49944.1| Inner membrane protein translocase component YidC, long form
           [Shigella dysenteriae CDC 74-1112]
 gi|320185530|gb|EFW60296.1| Inner membrane protein translocase component YidC, long form
           [Shigella flexneri CDC 796-83]
 gi|332089380|gb|EGI94484.1| inner membrane protein oxaA [Shigella boydii 3594-74]
          Length = 531

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 134/554 (24%), Positives = 243/554 (43%), Gaps = 52/554 (9%)

Query: 19  YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78
             WQ +           ++      +Q  Q   + A    D    A      + +K   L
Sbjct: 1   MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51

Query: 79  IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138
             +IN +G   +   L  Y  +++S  P   L   ++ +  Y A+             N 
Sbjct: 52  DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109

Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192
                 +               + + + +A    F +T  L    Y   +   V N    
Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169

Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245
            +  S  G++ +         T ++ F +     A          + K+  I  +   N 
Sbjct: 170 PLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229

Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305
                W+ +  +Y+A+ +IP  + + +  F   + G+      + +  + + PG++    
Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTGAMN 287

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           + L+ G +    +         P  ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+
Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
           + T  V+ + +PL K QY S A M+ +QPKI  +RE+      Q + + M+ LYK   +N
Sbjct: 343 IITFIVRGIMYPLTKTQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           PL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A DP               
Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
                 I PI+M ++MF   KMSP    D  Q  I+ +MPV+F      FP+GL++Y+  
Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502

Query: 545 SNVISIVQQAVIMK 558
           SN+++I+QQ +I +
Sbjct: 503 SNLVTIIQQQLIYR 516


>gi|134096616|ref|YP_001101691.1| preprotein translocase membrane subunit [Herminiimonas
           arsenicoxydans]
 gi|166975870|sp|A4GAN3|OXAA_HERAR RecName: Full=Inner membrane protein oxaA
 gi|133740519|emb|CAL63570.1| Inner membrane protein OxaA [Herminiimonas arsenicoxydans]
          Length = 569

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 146/579 (25%), Positives = 239/579 (41%), Gaps = 39/579 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM-----------------NNERKNIQTVK 44
                  + +  S  ++  W N+  Y     +                 NN  K      
Sbjct: 1   MDIKRTVLWVIFSFSLLMLWDNYNRYTGKPSIFFDSTTTQQAAAPAATGNNAAKTADAPT 60

Query: 45  QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                  S A         A   S  + +    +   I+  G +   L L  +H      
Sbjct: 61  AATTAATSGANTPGVPDGAAAVKSEVITITTDLMKIGIDTAGGEVRHLELLKHHESGDE- 119

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
           S  V L    N ++ Y  +   +         +                  + L  +   
Sbjct: 120 SKNVVLF-DENGQHTYLGQTGLIG-GAYPNHKSMFAAVPGPRTLDSANQVQLVLQSEQQG 177

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV---QEGFI 221
             L +        Y   I   V NN+   I  S   +++         +  +     G  
Sbjct: 178 VKLIKTFTFKRGEYKVDIKHDVVNNTSTAITPSLYLQLVHDGSALGGGSMFMASAFTGPA 237

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
                    +  +  IEK    +  +  + W+ +   Y+ S F+P   T      K L  
Sbjct: 238 IYTEADKFQKVTFESIEKGKAEHAMKGESGWIALVQHYFVSAFVPPANTPREYFTKKL-- 295

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
               Y         T+ PG + +    +++G +E   +         P FE++ D+GW  
Sbjct: 296 ATNLYAVGTILPMGTVAPGATASMDTTMYSGPQESKRLEAVA-----PGFELVKDYGWLT 350

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
            IAKP+F LM   + ++GN+G  I++ T+ +KL FFPL+   Y S A MK + PK+ ++R
Sbjct: 351 IIAKPIFWLMMQIHQILGNWGWTIIVLTIVIKLAFFPLSAAGYRSMAKMKLVTPKMTDIR 410

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
            ++K   PQ +  AM++LYK   INP+ GC+P+L+QIPVF ++Y V+  S+E+R+A +  
Sbjct: 411 TRYKG-EPQKMNAAMMELYKKEKINPIGGCFPMLVQIPVFISLYWVLLASVEIRNASW-L 468

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           WI DLAA D        G         + +GI PI+M++SMFIQ K++P P D  QA ++
Sbjct: 469 WIHDLAAPDILFGSYHIG------TFHLTIGILPILMAISMFIQTKLNPTPPDPIQAKVM 522

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            +MP+ F      FPAGL++YW  +N++SI QQ  I + 
Sbjct: 523 MFMPIAFSVMFFFFPAGLVLYWVVNNILSIAQQWFINEK 561


>gi|260221779|emb|CBA30684.1| Inner membrane protein oxaA [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 565

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 131/586 (22%), Positives = 232/586 (39%), Gaps = 47/586 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M       + +     +V  W  +         +     ++  +      +      V  
Sbjct: 1   MNDIRRTILWVIFGFSMVLLWDQWQIHNGKQATFFPNPAQKAASAPAPAVSASAGVPVAP 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
             A       +     S R E+    L  + +  G          Y      +   V L 
Sbjct: 61  VAAGQAPVSTSAPALASERFEVSTDVLKLTFDTLGGSLVRSEFLQYLDSNDKSRNFVLL- 119

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI----KLVFKNANNIL 167
                   Y A+   +  A     P   +V  +   K L                    L
Sbjct: 120 -DDTKDRYYQAQTGLIGGAAPDSFPTHKSVMAVSGDKSLKDGQDELKIVFTSQDTGGIKL 178

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLG 225
            +        Y   +   V N     +      +++R    P   ++ +    G      
Sbjct: 179 VKTYTLRRGAYDIAVKHEVVNTGATALNPQLYLQLVRDGNKPAGESSFYSTFTGPAVYTD 238

Query: 226 DKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDG--- 281
            K   + ++S I+K +     ES N ++ +   Y+AS +I   +            G   
Sbjct: 239 LKKYQKVEFSAIKKGNADFEKESSNGYIAMVQHYFASAWILPADEKRTFSLDAKDVGATV 298

Query: 282 -HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
               Y+A        + PG++      LF G +E   +         P  E++ D+GW  
Sbjct: 299 ADCCYRATMITPLEAVAPGQTKAVEAKLFVGPQEEKKLEALA-----PGMELVKDYGWLT 353

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
            +AKP++ L+   ++ + N+G +I+   + +K+ F+ L  K Y S A MK + P+I E+R
Sbjct: 354 ILAKPLYWLLDKLHSFIQNWGWSIVALVLLLKIAFYWLNAKAYASMAKMKAVNPRIMEMR 413

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           E+ K +P Q+ Q+ M+++Y+   +NP+ GC+PI++QIPVF A+Y V+  S+EMR+AP+  
Sbjct: 414 ERLKDNPQQM-QQEMMKIYREEKVNPMGGCFPIMIQIPVFIALYWVLLSSVEMRNAPWVM 472

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           WI DL++ DP                     I P++M+L+  +Q  ++P P D  QA ++
Sbjct: 473 WIHDLSSPDPYF-------------------ILPVVMTLTTLLQTALNPAPPDPLQAKMM 513

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
             MP+ F      FP+GL++YW  +N++SI QQ +I    G     
Sbjct: 514 WIMPLAFSVMFFFFPSGLVLYWITNNILSIAQQWIINTRMGVPPQF 559


>gi|332968628|gb|EGK07682.1| YidC/Oxa1 family membrane protein insertase [Kingella kingae ATCC
           23330]
          Length = 556

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 130/601 (21%), Positives = 251/601 (41%), Gaps = 67/601 (11%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+     F+A ALS +I+  W+  +  P+++           V+  + +  +        
Sbjct: 1   MDF-KRMFIAFALSFLILMGWEQMFPRPQVQTTGANATATSQVQAASALSETVP------ 53

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + ++  ++   I+ K      L L  Y+     N   V           Y
Sbjct: 54  ----------ITVQTDTVQAIIDEKSGDLRGLTLNQYNAAADENQKFVLF-----ADGKY 98

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL- 179
            A+   +       L   +      S  +      ++L  + A+ +  ++  +  ++   
Sbjct: 99  LAQSHLLDANGKNLLDGVSFSSPQKSYTLNGDKLEVRLTAQAASGVQVDKVYTFHKNSYL 158

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKP-QTATNTFG--VQEGFIAVLGDKSLVEQKYSD 236
             +   V N     ++     +++R          F        +         +  +SD
Sbjct: 159 INVRFDVKNTGSSAVKVGTSYQVVRDNSKPEGEGWFMQSYHGPVVYTPDADEFQKVTFSD 218

Query: 237 IEKS-------SISNFHESNSWLGISDKYWASVFI--PSKETSFHS----QFKYLSDGHA 283
           ++         +      +  ++G+   Y+ S +I  P++  +  +              
Sbjct: 219 LDDDFASGKDTAEYQRKATGGYVGMIQHYFVSAWIMQPAQGDNVCAQAACTVDIKKRSEQ 278

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            YQA  +     +  G + +    L+AG +    +         P F++  D+G  +  A
Sbjct: 279 LYQAGVNVAAADVAAGATQSFGANLYAGPQVTSVLKTVA-----PEFDLTKDYGRVHIFA 333

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
            P+F L+++ + L+GN+G AI+  T+ VK + +PL  K Y S A M+ + PK++ L+ K 
Sbjct: 334 APLFALLNWLHGLIGNWGWAIVFLTMIVKAVLYPLNDKAYKSMAKMRAVAPKMEALK-KQ 392

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                  LQ+AM++LY+   INPL GC P+LLQ+P+F  +Y +I +S+E+R AP+ GWI 
Sbjct: 393 YGEDRMGLQQAMMKLYRDEKINPLGGCLPMLLQMPIFIGLYWMIFLSVELRQAPWLGWIT 452

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DL+  DP                     I PI+M+ +M+ Q  ++PPP+D  QA ++  M
Sbjct: 453 DLSRPDPWF-------------------ILPILMAATMWFQTTLNPPPSDPMQAQMIKIM 493

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK---MHGAEIGLIDRLRSTFSKNYNS 580
           P++F      FPAGL++Y+  +N+++I QQ  I +   M      ++D+  +       S
Sbjct: 494 PLIFSIMFFFFPAGLVLYYVINNLLTIAQQWHINRQTEMVATAPQVLDKEPNGKKNKKYS 553

Query: 581 Q 581
           +
Sbjct: 554 E 554


>gi|332084044|gb|EGI89251.1| inner membrane protein oxaA [Shigella dysenteriae 155-74]
          Length = 531

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 134/554 (24%), Positives = 243/554 (43%), Gaps = 52/554 (9%)

Query: 19  YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78
             WQ +           ++      +Q  Q   + A    D    A      + +K   L
Sbjct: 1   MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51

Query: 79  IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138
             +IN +G   +   L  Y  +++S  P   L   ++ +  Y A+             N 
Sbjct: 52  DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109

Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192
                 +               + + + +A    F +T  L    Y   +   V N    
Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169

Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245
            +  S  G++ +         T ++ F +     A          + K+  I  +   N 
Sbjct: 170 PLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229

Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305
                W+ +  +Y+A+ +IP  + + +  F   + G+      + +  + + PG++    
Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTGAMN 287

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           + L+ G +    +         P  ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+
Sbjct: 288 STLWVGPEIQDKMATVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
           + T  V+ + +PL K QY S A M+ +QPKI  +RE+      Q + + M+ LYK   +N
Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           PL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A DP               
Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
                 I PI+M ++MF   KMSP    D  Q  I+ +MPV+F      FP+GL++Y+  
Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502

Query: 545 SNVISIVQQAVIMK 558
           SN+++I+QQ +I +
Sbjct: 503 SNLVTIIQQQLIYR 516


>gi|171464337|ref|YP_001798450.1| 60 kDa inner membrane insertion protein [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|254773010|sp|B1XSN7|OXAA_POLNS RecName: Full=Inner membrane protein oxaA
 gi|171193875|gb|ACB44836.1| 60 kDa inner membrane insertion protein [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 557

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 159/588 (27%), Positives = 267/588 (45%), Gaps = 57/588 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFY------------VYPRIEEMNNERKNIQTVKQPNQ 48
           M+     F A A S+  +  + N+                     +    N +       
Sbjct: 1   MDFKKTIFWA-AFSMSGLMLYNNWQVHEGKPSLFGGAPASAPAVADKATTNNKVDVPTQI 59

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
                 A        A+  + +  L+N  L+  I+  GA   D  L      +++ +  V
Sbjct: 60  SGAPSVAATPIINGGAIESAEKFTLQNDVLVLEISASGANVIDAKLLK---SLTAENKPV 116

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
            L   + T   YFA    VS  NN +LPN  + + L+         P  +     N +  
Sbjct: 117 ELFQYTPTHK-YFARSGLVSLNNN-DLPNHTSTFKLVQSGKDGSGRPFAVFASERNGVRL 174

Query: 169 ERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGF 220
           E+T  L+   Y+  +   VT ++ +         I+R         P     +     G 
Sbjct: 175 EKTFILNPGSYVVDVGHRVTQSTSNPNPLVLYTEIVRDASQEQKIGPFGGAFSANTFTGP 234

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFH----ESNSWLGISDKYWASVFIPSKETSFHSQFK 276
           +A    +   + ++S I+K+ I+          +W+ +   Y+AS +IP  + +      
Sbjct: 235 VAYTDKEKFNKLEFSAIDKNKITIPTLVAAGEPAWIAMVQHYFASAWIPGDKVARDIYTG 294

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
            + +G   Y+         + PG ++     LF G +E   +         P FE+L D+
Sbjct: 295 RIDNG--LYRIGMQTPLGMVGPGSTVVEKAKLFVGPQEERVLETIA-----PGFELLKDY 347

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           G+   +AKP+F L+   +  VGN+G +I+L T+ +KL+FFPL+   Y S A MK +QP++
Sbjct: 348 GYLTILAKPIFWLLDNIHFYVGNWGWSIILLTILIKLVFFPLSAASYKSMARMKEVQPRL 407

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
             ++E++K   PQ L +AM+++Y+   INPL GC P+++QIPVF ++Y V+  S+E R A
Sbjct: 408 VAMKEQYKG-EPQKLNQAMMEMYRKEKINPLGGCLPVVIQIPVFISLYWVLLSSVETRGA 466

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+  WI DL+  DP                     I P+IM++SMF+Q K++P P D  Q
Sbjct: 467 PWILWIHDLSVPDPYY-------------------ILPVIMAVSMFVQTKLNPTPPDPIQ 507

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           A ++ +MP+VF      FPAGL++YW  +N++SI QQ  I +M G + 
Sbjct: 508 AKVMMYMPIVFSVMFFFFPAGLVLYWVVNNLLSIAQQWQINQMFGKKP 555


>gi|323161043|gb|EFZ46962.1| inner membrane protein oxaA [Escherichia coli E128010]
          Length = 531

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 134/554 (24%), Positives = 242/554 (43%), Gaps = 52/554 (9%)

Query: 19  YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78
             WQ +           ++      +Q  Q   + A    D    A      + +K   L
Sbjct: 1   MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51

Query: 79  IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138
             +IN +G   +   L  Y   ++S  P   L   ++ +  Y A+             N 
Sbjct: 52  DLTINTRGGDVEQALLPAYPKKLNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109

Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192
                 +               + + + +A    F +T  L    Y   +   V N    
Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169

Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245
            +  S  G++ +         T ++ F +     A          + K+  I  +   N 
Sbjct: 170 PLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229

Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305
                W+ +  +Y+A+ +IP  + + +  F   + G+      + +  + + PG++    
Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTGAMN 287

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           + L+ G +    +         P  ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+
Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
           + T  V+ + +PL K QY S A M+ +QPKI  +RE+      Q + + M+ LYK   +N
Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           PL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A DP               
Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
                 I PI+M ++MF   KMSP    D  Q  I+ +MPV+F      FP+GL++Y+  
Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502

Query: 545 SNVISIVQQAVIMK 558
           SN+++I+QQ +I +
Sbjct: 503 SNLVTIIQQQLIYR 516


>gi|167560996|ref|ZP_02353912.1| putative inner membrane protein translocase component YidC
           [Burkholderia oklahomensis EO147]
          Length = 483

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 142/509 (27%), Positives = 226/509 (44%), Gaps = 44/509 (8%)

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP--IVTLLSPSNTKNA 119
               + +  V        G I+ +G     L L+    +     P   VTL   +   + 
Sbjct: 1   TAPAAQAQLVRFSTDVYDGEIDTRGGTLAKLTLKK---EGDGKQPDLFVTLFDHAEN-HT 56

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISL 174
           Y A    +      + PN N V+  ++G          L             + +     
Sbjct: 57  YLARTGLL----GGDFPNHNDVYAQVAGPTSLSGDQNTLKLSFESPVKGGVKVVKTYTFT 112

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQK 233
              Y+  +   + N     +  +    ++R      T  F     G       K   +  
Sbjct: 113 RGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTPVETPLFSHTFLGPAVYTDQKHFQKIN 172

Query: 234 YSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
           +SD++K+         N W+ +   Y+AS +IP +                 Y+      
Sbjct: 173 FSDVDKNKADYVASADNGWIAMVQHYFASAWIPQQGA--KRDIYVEKIDPTLYRVGVKQP 230

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
              I PG+S   +  LFAG +E   +         P  E++ D+GW   IAKP+F L+  
Sbjct: 231 VAAIAPGQSADVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEK 285

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
            +  VGN+G AI+L T+ +K +FFPL+   Y S A MK I P++  LRE+F +S PQ + 
Sbjct: 286 IHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMN 344

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
            A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+  DP  
Sbjct: 345 AALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYF 404

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532
                              I P++M++SMF+Q K++P P D  QA ++ +MP+ F     
Sbjct: 405 -------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFF 445

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 446 FFPAGLVLYYVVNNVLSIAQQYYITRTLG 474


>gi|269468577|gb|EEZ80226.1| Preprotein translocase subunit YidC [uncultured SUP05 cluster
           bacterium]
          Length = 546

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 137/578 (23%), Positives = 241/578 (41%), Gaps = 54/578 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRI-----------------EEMNNERKNIQTV 43
           M+    +F+ +A+ + I   W  + +   +                       +    T 
Sbjct: 1   MDNQK-FFLIVAIFLSIFLLWDKWEITHTVDTNGNLVRQTKTIEFDTPTPVQTQSQTPTQ 59

Query: 44  KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            Q         A +    A A+   P   +    L   I+ KG    +  L  Y  ++  
Sbjct: 60  DQDVPSITHTKARVDLPIAPAIQQHPHTTVSTDLLTVEISHKGGTVQNALLNAYPEELDG 119

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
                 L   SN     F     +     +   +S    +  + ++   T  +   +K+ 
Sbjct: 120 IKKFQLL---SNKAGGLFQAQSGLLPQEQMPTHHSIFTSSNNNYQLNGETLTVPFKWKSD 176

Query: 164 NNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
           N I   +        Y+  +   VTNNS  ++  S   +++R+    +        G   
Sbjct: 177 NGIEVVKNFHFKRGSYVITVDYVVTNNSNKELTLSSYTQLVRNALDESNMMMPTFTGGAK 236

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                   + ++ D              W  +   Y+ + +IP  + +        ++  
Sbjct: 237 FDDQDVYEKIEFDDFSSEP--KTTSKGGWTAMIQHYFFAAWIPDSDNTHSYSSSARNNN- 293

Query: 283 ARYQAKFSANEITILPGKSITT-TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
             Y        ++I PG +     + L+ G KE   I         P  +  +D+G  + 
Sbjct: 294 --YLLTVVNPNVSIAPGATTVLPGSDLYIGPKEQARIDSVA-----PGLDKTVDYGVLFI 346

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           IAKP+  LM + Y++V ++G +I++ T+ +KL F+ L++K Y S A M+ + P++ +L+E
Sbjct: 347 IAKPLSELMHWIYSIVNSWGWSIIILTILIKLAFYKLSEKSYRSMAGMRKLSPRLTKLKE 406

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
            +     Q L +  ++LYK   INP +GC PIL+QIPVF ++Y V+   +E+R  P + +
Sbjct: 407 TYGDDK-QKLGQKTMELYKKEKINPASGCLPILVQIPVFISLYWVLLEMVELRQTP-FWY 464

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
           + DL+A DP                     I PIIM +SMF+Q K++PPP D  QA I+ 
Sbjct: 465 LADLSAQDPYY-------------------ILPIIMGVSMFVQQKLNPPPPDPMQAKIMM 505

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            +P VF      FP+GL++YW  +N++SI QQ VI K 
Sbjct: 506 SLPFVFTIFFLWFPSGLVLYWVVNNILSITQQWVINKR 543


>gi|327250848|gb|EGE62550.1| inner membrane protein oxaA [Escherichia coli STEC_7v]
          Length = 531

 Score =  315 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 134/554 (24%), Positives = 242/554 (43%), Gaps = 52/554 (9%)

Query: 19  YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78
             WQ +           +       +Q  Q   + A    D    A      + +K   L
Sbjct: 1   MIWQAW---------EQDTNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51

Query: 79  IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138
             +IN +G   +   L  Y  +++S  P   L   ++ +  Y A+             N 
Sbjct: 52  DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109

Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192
                 +               + + + +A    F +T  L    Y   +   V N    
Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169

Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245
            +  S  G++ +         T ++ F +     A          + K+  I  +   N 
Sbjct: 170 PLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229

Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305
                W+ +  +Y+A+ +IP  + + +  F   + G+      + +  + + PG++    
Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQAGAMN 287

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           + L+ G +    +         P  ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+
Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
           + T  V+ + +PL K QY S A M+ +QPKI  +RE+      Q + + M+ LYK   +N
Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           PL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A DP               
Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
                 I PI+M ++MF   KMSP    D  Q  I+ +MPV+F      FP+GL++Y+  
Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502

Query: 545 SNVISIVQQAVIMK 558
           SN+++I+QQ +I +
Sbjct: 503 SNLVTIIQQQLIYR 516


>gi|323177717|gb|EFZ63301.1| inner membrane protein oxaA [Escherichia coli 1180]
          Length = 531

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 134/554 (24%), Positives = 243/554 (43%), Gaps = 52/554 (9%)

Query: 19  YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78
             WQ +           ++      +Q  Q   + A    D    A      + +K   L
Sbjct: 1   MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51

Query: 79  IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138
             +IN +G   +   L  Y  +++S  P   L   ++ +  Y A+             N 
Sbjct: 52  DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109

Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192
                 +               + + + +A    F +T  L    Y   +   V N    
Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169

Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245
            +  S  G++ +         T ++ F +     A          + K+  I  +   N 
Sbjct: 170 PLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229

Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305
                W+ +  +Y+A+ +IP  + + +  F   + G+      + +  + + PG++    
Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTGAMN 287

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           + L+ G +    +         P  ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+
Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
           + T  V+ + +PL K QY S A M+ +QPKI  +RE+      Q + + M+ LYK   +N
Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QHISQEMMALYKAEKVN 401

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           PL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A DP               
Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
                 I PI+M ++MF   KMSP    D  Q  I+ +MPV+F      FP+GL++Y+  
Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502

Query: 545 SNVISIVQQAVIMK 558
           SN+++I+QQ +I +
Sbjct: 503 SNLVTIIQQQLIYR 516


>gi|190576475|ref|YP_001974320.1| putative inner membrane protein translocase component YidC
           [Stenotrophomonas maltophilia K279a]
 gi|254778166|sp|B2FPA5|OXAA_STRMK RecName: Full=Membrane protein oxaA
 gi|190014397|emb|CAQ48045.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
          Length = 571

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 143/589 (24%), Positives = 250/589 (42%), Gaps = 56/589 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID- 59
           M +   + +   L V ++  W  +              +     Q     N  A      
Sbjct: 1   MNQTRVFLIFAWLMVAVLL-WMEWSREKAAPTPAPTTTSAPAAAQSVPGANPGAIPSAQV 59

Query: 60  ----------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
                      +A A   S RV +    L   ++  G +  D  L  +       SP V 
Sbjct: 60  PGAPGQAAAQAQASATPASQRVTVTTDVLRLVLD--GGRVLDAELLQFPQTKDEGSPPVR 117

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNAN 164
           LL+  +  + Y A   + S   N  +P ++    +   K            I  V+   N
Sbjct: 118 LLT-EDPAHPYSAISGWASEDRNTPVPGADGFKLVGDTKDFVLAKGQNELQIPFVWTADN 176

Query: 165 NILFERTISLDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEG 219
            +  +RT+++  +    +  D V+N             + R     + +          G
Sbjct: 177 GVTIKRTLTVSRNEYAVRFKDEVSNAGAAPWNGYVYRTLDRTPTILSRSMTNPDSFSFNG 236

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                 DK    + + D  +    N + +  WL +   ++ + +IP K+ + H     ++
Sbjct: 237 ATWYDNDKKYQRRAFKDYLEDGTLNQNITGGWLAMLQHHFFTAWIPQKDQTAHYVLSQVA 296

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
               R   +      T+ PG+S +T   L+ G K    I        +P  + ++D+  F
Sbjct: 297 G---RDLIEARGPAFTVAPGQSTSTEARLWVGPKLVNLIAKE----DVPGLDRVVDYSRF 349

Query: 340 YFIA---KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
             +A   + +F +++  + LVGN+G AI+   V +KL+ +PL+  QY S A M+  QP+I
Sbjct: 350 SMMAVIGQGLFWVLNQVHKLVGNWGWAIVGLVVLLKLVLYPLSATQYKSGAKMRRFQPRI 409

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
            +L+E++     Q  Q AM++LYK   INP+ GC PIL+Q+P+FFA+Y V+  S+E+R A
Sbjct: 410 AQLKERYGD-DRQKFQTAMMELYKKEKINPMGGCLPILIQMPIFFALYWVLVESVELRQA 468

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKG 515
           P++GWI+DL A DP                     I P+I    M+   K++P P  D  
Sbjct: 469 PWFGWIQDLTARDPYF-------------------ILPVINVAVMWFTQKLTPAPGMDPM 509

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           Q  ++ +MP+VF   ++  P+GL++YW  +  + ++QQ  + K HG E 
Sbjct: 510 QQKMMQFMPLVFGVMMAFMPSGLVLYWVVNGGLGLLQQWWMTKRHGGEP 558


>gi|313647713|gb|EFS12161.1| inner membrane protein oxaA [Shigella flexneri 2a str. 2457T]
          Length = 531

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 133/554 (24%), Positives = 242/554 (43%), Gaps = 52/554 (9%)

Query: 19  YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78
             WQ +           ++      +Q  Q   + A    D    A      + +K   L
Sbjct: 1   MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51

Query: 79  IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138
             +IN +G   +   L  Y  +++S  P   L   ++ +  Y A+             N 
Sbjct: 52  DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109

Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192
                 +               + + + +A    F +T  L    Y   +   V N    
Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169

Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245
            +  S  G++ +         T ++ F +     A          + K+  I  +   N 
Sbjct: 170 PLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229

Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305
                W+ +  +Y+A+ +IP  + + +  F   + G+      + +  + + PG++    
Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIVAIGYKSQPVLVQPGQTGAMN 287

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           + L+ G +    +         P  ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+
Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
           + T  V+ + +PL K QY S A M+ +QPKI  +RE+      Q + + M+ LYK   +N
Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           PL GC+P+L+Q+P+F A+Y ++  S+E+R APF  WI DL+A DP               
Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
                 I PI+M ++M    KMSP    D  Q  I+ +MPV+F      FP+GL++Y+  
Sbjct: 449 ------ILPILMGVTMLFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502

Query: 545 SNVISIVQQAVIMK 558
           SN+++I+QQ +I +
Sbjct: 503 SNLVTIIQQQLIYR 516


>gi|325267553|ref|ZP_08134205.1| inner membrane protein OxaA [Kingella denitrificans ATCC 33394]
 gi|324980903|gb|EGC16563.1| inner membrane protein OxaA [Kingella denitrificans ATCC 33394]
          Length = 556

 Score =  314 bits (804), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 135/588 (22%), Positives = 247/588 (42%), Gaps = 63/588 (10%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
                 F+A ALS++I++ +   Y  P                QPN    + A       
Sbjct: 1   MDAKRLFIATALSMLILWGYGQMYPSP----------------QPNTAATATAQQAQVQA 44

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
           A  L  +  + +   ++   I+ K      + L  Y+         V L         Y 
Sbjct: 45  ASPLGATSPITVNTDTVQAVIDEKSGDLRGMTLNQYNSAADEQQKFVLL--ADGKPLTYI 102

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL-F 180
           A+ + V       L          +  +   T  +KL  + AN +  ++  +  ++    
Sbjct: 103 AQSELVDANGKNWLEGLTFSSAQKNYTLSGDTLEVKLSAQAANGVNIDKVYTFRKNSYLV 162

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKP-QTATNTFG--VQEGFIAVLGDKSLVEQKYSDI 237
            +   V N     I+     +++R          F        +         + KYSD+
Sbjct: 163 NVRFDVKNTGSAPIQVGTNYQVVRDNSKPEGEGWFMSSYNGPVVYTPDSDEFQKVKYSDL 222

Query: 238 EKS-------SISNFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +         +      +  ++G+   Y+ S +I   +   +                  
Sbjct: 223 DDDFQTGKDTAEYQRKATGGYVGMIQHYFVSAWIMQPQEGSNICEKAACTVNMKKRSDNL 282

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y +  +   + +  G S +    L+AG +    +         P+FE+  D+G  +  A 
Sbjct: 283 YSSGVNVAPVQVAAGSSQSFGAQLYAGPQITSILKTVS-----PKFELTKDYGRVHIFAA 337

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L+++ ++L+ N+G AI++ T+ VK + +PL  K Y S A M+ + PK++ L+ K  
Sbjct: 338 PLFALLNWLHSLINNWGWAIIVLTIIVKAILYPLNNKAYRSMAKMRTVAPKMEALK-KQY 396

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                 LQ+AM++LY+   INPL GC P+L+Q+P+F  +Y +I +S+E+R AP+ GWI D
Sbjct: 397 GDDKMGLQQAMMKLYRDEKINPLGGCLPMLVQMPIFIGLYWMIFLSVELRQAPWLGWITD 456

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+  DP                     I PI+M+ +M+ Q  ++PPP+D  QA ++  MP
Sbjct: 457 LSRPDPFF-------------------ILPILMAATMWFQTTLNPPPSDPTQAQMMKIMP 497

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK---MHGAEIGLIDR 569
           ++F      FPAGL++Y+  +N+++I QQ  I +       E  ++D+
Sbjct: 498 LMFSVMFFFFPAGLVLYYVVNNLLTIAQQWHINRQSEKLATEPQVLDK 545


>gi|94987512|ref|YP_595445.1| preprotein translocase subunit YidC [Lawsonia intracellularis
           PHE/MN1-00]
 gi|259515698|sp|Q1MPF3|OXAA_LAWIP RecName: Full=Membrane protein oxaA
 gi|94731761|emb|CAJ55124.1| Preprotein translocase subunit YidC [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 532

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 148/568 (26%), Positives = 250/568 (44%), Gaps = 46/568 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME      +AI LS+++   W +F  Y        +    +     +Q   S  A+    
Sbjct: 1   MED-KRIVLAIILSLVVFLGWHSFAEYMGWISPKVQHVANERHSSVDQTATSNIALDSVQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              +      V ++ P  I  I+  G       L+ Y +++ + SP+V L+SP  ++   
Sbjct: 60  SVFSPPTGKDVYIETPLYIAKIHSSGGILSSFILKKYKVNLDNTSPLVNLVSPEASQAMP 119

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGK-ILTPTTPIKLVFKNANNILFERTISLDEHYL 179
                      N +   SN  W+ + G   L P    +L F    N +    I       
Sbjct: 120 LGITL------NGQPSWSNGNWSFLGGDLYLKPGETKELTFVGIVNGVKIIRIFTFNADS 173

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           + I + +   S  Q     +  ++       T  +      +A     S  E+   D  K
Sbjct: 174 YLIHEKLQLASEKQNSCPTKVGLLVAATPFGTGQYDP--TRMAWSIKDSFKEETSIDTLK 231

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
                     +W G+   Y+ +V   S       + +  +D    ++     + + I   
Sbjct: 232 EKGIQESGEFNWGGVMSNYFMNVVALSDPLYLTIKGRIQND---VWRVALERSNVLIPAE 288

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359
            + + T   + G K+   +          + E  ID+G F  IAKP+   +++FY   GN
Sbjct: 289 GTTSITVNWWFGPKDRELLSRAPD-----KLENAIDFGMFSIIAKPLLTALTFFYEYTGN 343

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +G+AI++ T+ +K++F+PL++K Y S   MK +QP + +LREK+       L + ++QLY
Sbjct: 344 WGVAIIVLTLCIKIVFWPLSQKSYNSMEQMKKLQPMMQKLREKYANDRDT-LNREIMQLY 402

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIKDLAAADPT 471
           KT+ +NP  GC PILLQIPVF  +Y+ +  S+E+RHA F          W+ DL+AADP 
Sbjct: 403 KTYKVNPAGGCLPILLQIPVFIGLYQALLNSIELRHATFIYYLPFTHLVWLADLSAADPF 462

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531
                               I P++M  SMF+Q K++P   D  Q  I+  MP++F    
Sbjct: 463 Y-------------------ITPLLMGASMFLQQKLTPASGDPTQQKIMMVMPIIFTVMF 503

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            +FPAGL+IYW ++N++SI QQ  +++ 
Sbjct: 504 LNFPAGLVIYWLFNNLLSIGQQWWMLRK 531


>gi|78224744|ref|YP_386491.1| protein translocase subunit yidC [Geobacter metallireducens GS-15]
 gi|123570635|sp|Q39PQ8|OXAA_GEOMG RecName: Full=Inner membrane protein oxaA
 gi|78195999|gb|ABB33766.1| protein translocase subunit yidC [Geobacter metallireducens GS-15]
          Length = 536

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 152/565 (26%), Positives = 250/565 (44%), Gaps = 36/565 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME      +A+ LS++  Y +   +  P+ E      +   T  QP     S AAV    
Sbjct: 1   ME--KRALIAVILSIVFFYGYSALFPPPKKEAPAPSAQQAVTGSQPGAPQASVAAVPAPS 58

Query: 61  RAQAL---SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
              A    +    + ++ P      + +G     L L+ Y          VTL+   +  
Sbjct: 59  PVPAAAVKAQQKEIAVETPDYTAVFSTQGGSLTRLVLKKYRETADLTGKHVTLVDERD-P 117

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
           +AY           +      ++  +L                  A   + +       +
Sbjct: 118 SAYTLSTRAAGIGLDPSALFVSSADSLTVEAGEEKKELAFTWISPAGVTVRKIYTFQGGN 177

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +V    N+   ++  + +  +          +     G +       L E+K  D+
Sbjct: 178 YGIDMVYQTANSGTARVGAAFQTVMTYPAVPRVKESRLETFGPVTF-AQDKLTEEKVKDL 236

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
                S  + +  W G +DKY+ S  +    +   +  +    G        +A E ++ 
Sbjct: 237 VGQGKS--YSAPLWSGFADKYFLSAVVGQGGSIATAAVRSTPRGMLEDTI--TAPETSLN 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
           PG+S +    L+ G K+   +            E  ID GWF  +AKP+   + +FY  V
Sbjct: 293 PGESKSVAYRLYFGPKDLDILKAQGNS-----LERAIDLGWFAMLAKPLLHSLKFFYKYV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+GIAI++ TV +K++F+PL    Y S   M+ +QPK+ E+REK+K      + KA+++
Sbjct: 348 HNYGIAIIIITVILKIIFYPLTHSSYKSMKQMQKLQPKMQEVREKYKNDRD-AMNKAIME 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LY+TH +NP+ GC P+L+QIPVFFA+YK +  S+E+RHAPF  WI+DLA  DP       
Sbjct: 407 LYQTHKVNPVGGCLPMLVQIPVFFALYKALMFSIELRHAPFMLWIQDLAGKDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537
                         + PIIM ++M IQ KM+P   D  Q  ++  +PVVF F   +FP+G
Sbjct: 462 --------------VTPIIMGITMVIQQKMTPSQMDPMQQKMMMALPVVFTFMFLNFPSG 507

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGA 562
           L++YW  +NV++I+QQ+ I K   A
Sbjct: 508 LVLYWLVNNVLTIIQQSYINKSIAA 532


>gi|312882242|ref|ZP_07741988.1| putative inner membrane protein translocase component YidC [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309370086|gb|EFP97592.1| putative inner membrane protein translocase component YidC [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 551

 Score =  314 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 145/580 (25%), Positives = 240/580 (41%), Gaps = 53/580 (9%)

Query: 1   MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+   N  + I L   S ++   WQ F   P           I+ V+  + +    +A  
Sbjct: 1   MDSQRN-ILLIGLAMVSFLLFTKWQQFQDKPSQP--------IEQVQSSSALPVQNSADE 51

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
           +D      S +  + +K   L  SI+  G      +L  Y   +    P V L       
Sbjct: 52  LDAAPVQTSSAKTISVKTDVLTLSIDTVGGDVVHADLNQYAEQMDKPDPFVLL--KDKPS 109

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174
           + + A+   +                               + + +K       +  I  
Sbjct: 110 HIFIAQSGLIGPQGVDLKTQRPAYLVNGDSFVLADGQDELSVPMTYKANGLEYTKTFIFK 169

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233
              Y   +   V N+S           + +       + T     G      D    +  
Sbjct: 170 RGSYAIDVKYDVVNHSGSNATIGAYAHLRQTLLDDGGSITMPTYRGGAYSDQDTRYKKYS 229

Query: 234 YSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ------ 286
           + D++  S+S        W+ +   Y+A+ +IP  E       + +S+ +          
Sbjct: 230 FDDMQDKSLSITLPDGKGWVAMIQHYFATAWIPRNEPDTKIYTRVVSNDNTFDPAQDNTV 289

Query: 287 --AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
                     TI  G        L+ G K    +     +      ++++D+GW +FIAK
Sbjct: 290 GDIGIRMPNKTIADGDKAQFLATLWVGPKLQDQMAEVADN-----LDLVVDYGWLWFIAK 344

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+  L+SY +N VGN+G AI+  T  V+   +PL K QY S A M+ +QPK+  +RE+  
Sbjct: 345 PLHSLLSYIHNFVGNWGFAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIG 404

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               Q + + M++LYK   +NPL GC P+LLQ+P+F A+Y  +  S+E+RH+PF+GWI D
Sbjct: 405 D-DRQRMSQEMMELYKKEKVNPLGGCLPLLLQMPIFIALYWALMESVELRHSPFFGWITD 463

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523
           L+A DP                     I P++M  SMF+  KMSP    D  Q  I+ +M
Sbjct: 464 LSAKDPYF-------------------ILPLLMGASMFMIQKMSPTTVTDPMQQKIMTFM 504

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           PV+F F    FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 505 PVMFTFFFIFFPSGLVLYWLVSNIVTLIQQTLIYKSLEKK 544


>gi|218781967|ref|YP_002433285.1| YidC translocase/secretase [Desulfatibacillum alkenivorans AK-01]
 gi|218763351|gb|ACL05817.1| YidC translocase/secretase [Desulfatibacillum alkenivorans AK-01]
          Length = 559

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 153/569 (26%), Positives = 265/569 (46%), Gaps = 25/569 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
              +   +A+ALS+++  A+Q F+   P   E   E + I  V+Q  +     AA  I  
Sbjct: 1   MEQFRLILAVALSLMVFIAYQYFFGPKPPQGETPVESQEIAQVQQSTEAHAQEAAAAITP 60

Query: 61  RAQALS----------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
              A             +  + +  P        KGA   DL L+ Y    + +S    +
Sbjct: 61  APAAAPIPEIAASPGRPARDITVDTPLYHAVFTEKGAGLSDLTLKEYWETQAKDSAPKRV 120

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170
           +       A         +  N+E    +            P + I      +  I+ + 
Sbjct: 121 V-DLPPGGATLLTTMARGSLGNLESAVFSAQSTEDLNVQEQPQSLIFTYTAPSGIIVTKT 179

Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT-NTFGVQEGFIAVLGDKSL 229
                + Y      +V NN++  I  +    +  +   ++  +    +  F   +   + 
Sbjct: 180 YTFQPDSYAMDCQLSVANNTLGPINDNLSVILNNYYTPSSKPSDKSDRIVFSGPMAFVNN 239

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
             +++   EK           W+ ++ +Y+ S  +  +      +   L+  +   Q  F
Sbjct: 240 SMEEFKVSEKKPEKTIQGPTGWVALTWRYFMSAVVFDQTQEGVIKAS-LNSANNVAQTLF 298

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
           +   + I PG++ TT+   F G K+   ++           E  +D+G+F+ IAKP  +L
Sbjct: 299 TGKPMAIPPGQTFTTSYKAFFGPKQGDILNKA-------GLENALDFGFFHVIAKPCLLL 351

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           M+  +N V N+G+ I+L T+ +K++ +PL  K Y S   MK +QP + ELREK+K    Q
Sbjct: 352 MNIMHNYVPNYGVVIILLTLLIKIVLWPLGSKSYRSMEKMKKLQPLMQELREKYKDDK-Q 410

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + + +  LYKT  +NP+ GCWP+L+QIP+F A YK++ +++E+RH+PF  WI DL+A D
Sbjct: 411 KMNQEVFALYKTFKVNPMGGCWPMLIQIPIFIAFYKMLYVAIELRHSPFIWWITDLSAPD 470

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529
              +F L   +PF    +  + +  +IM  SM +Q KMSPPP D  QA ++  +P+VF+F
Sbjct: 471 --RLFHLPFPVPFMAEPY-GIPVLTLIMGASMLLQQKMSPPPGDPTQAKMMMLLPLVFLF 527

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              +FP+GL++YW  +NV+SI QQ  I K
Sbjct: 528 IFINFPSGLVLYWLVNNVVSIAQQYYIGK 556


>gi|299068432|emb|CBJ39656.1| cytoplasmic insertase, essential for proper integration of ATPase
           into the membrane [Ralstonia solanacearum CMR15]
          Length = 553

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 139/577 (24%), Positives = 239/577 (41%), Gaps = 49/577 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM--------------NNERKNIQTVKQP 46
           M+      + +  S+ +V  + N+      + M                        +  
Sbjct: 1   MDI-KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGGTPAGDVPQAA 59

Query: 47  NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
                   A            S ++ +    +  +++  GA    L L         +  
Sbjct: 60  APAAAGSQAAPATGAVSQTPASEKIVVTTDVIRATVDTAGAVVTKLELL----TQKDHDG 115

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
              +L   + +  Y A    +   +        T               + L        
Sbjct: 116 NPMVLFDHSLERTYLARSGLIG-GDFPNHTTVFTASAGPRDLGTGGEVSLTLTADKGGAK 174

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLG 225
           L +  +     Y+      V N+    I  +    + R       +  +    G      
Sbjct: 175 LAKTYVFKRGSYVIDTRFDVANDGAAPINPTLYMELARDGGAVEQSRFYSTFTGPAVYTD 234

Query: 226 DKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
                +  ++DI+K          + W+ +   Y+AS +IP+       ++         
Sbjct: 235 GDKFHKITFADIDKGKAQVPAPTDSGWVAMVQHYFASAWIPAAN--VKREYYVNRVDTNF 292

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y+        T+ PG S++TT  LFAG ++   +         P  +++ D+GW   +AK
Sbjct: 293 YRIGLQEPLGTVAPGASVSTTARLFAGPQQARMLEAIT-----PGLDLVKDYGWLTIVAK 347

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L+   + L+GN+G +I+  TV +KL+FFPL+   Y S A MK++QP++  +RE+ K
Sbjct: 348 PLFWLLEKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHK 407

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
              PQ + + M+ LY+T  +NPL GC PI++QIPVF A+Y  +  S+EMR AP+ GW+ D
Sbjct: 408 G-DPQKMNQEMMTLYRTEKVNPLGGCLPIMIQIPVFMALYWALLSSVEMRGAPWLGWVHD 466

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           LA+ DP                     I PI+M++SMF+Q +++P P D  QA ++ +MP
Sbjct: 467 LASPDPFY-------------------ILPILMAVSMFVQTRLNPTPPDPVQAKMMMFMP 507

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           + F      FPAGL++YW  +N +SI QQ  I +M G
Sbjct: 508 IAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 544


>gi|167843727|ref|ZP_02469235.1| putative inner membrane protein translocase component YidC
           [Burkholderia pseudomallei B7210]
          Length = 499

 Score =  313 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 141/499 (28%), Positives = 220/499 (44%), Gaps = 42/499 (8%)

Query: 71  VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNAYFAELDYVST 129
           V        G I+ +G     L L           P +++ L      + Y A    +  
Sbjct: 26  VRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPDLSVTLFDHTANHTYLARTGLL-- 80

Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISLDEHYLFKIVD 184
               + PN N V+  ++G          L             + +        Y+  +  
Sbjct: 81  --GGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDT 138

Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243
            + N     +  S    ++R      T  F     G       K   +  + DI+K+   
Sbjct: 139 KIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKAD 198

Query: 244 NFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302
                 N W+ +   Y+AS +IP                   Y+         I PG+S 
Sbjct: 199 YVTSADNGWIAMVQHYFASAWIPQSGA--KRDIYVEKIDPTLYRVGVKQPVAAIAPGQSA 256

Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362
             +  LFAG +E   +         P  E++ D+GW   IAKP+F L+   +  VGN+G 
Sbjct: 257 DVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGW 311

Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422
           AI+L T+ +K +FFPL+   Y S A MK I P++  LRE+F +S PQ +  A+++LYKT 
Sbjct: 312 AIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMNAALMELYKTE 370

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
            +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+  DP            
Sbjct: 371 KVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYF---------- 420

Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
                    I P++M++SMF+Q K++P P D  QA ++ +MP+ F      FPAGL++Y+
Sbjct: 421 ---------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYY 471

Query: 543 SWSNVISIVQQAVIMKMHG 561
             +NV+SI QQ  I +  G
Sbjct: 472 VVNNVLSIAQQYYITRTLG 490


>gi|254251055|ref|ZP_04944373.1| Preprotein translocase subunit YidC [Burkholderia dolosa AUO158]
 gi|124893664|gb|EAY67544.1| Preprotein translocase subunit YidC [Burkholderia dolosa AUO158]
          Length = 554

 Score =  313 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 149/579 (25%), Positives = 241/579 (41%), Gaps = 51/579 (8%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVD- 50
           M+        I     ++    WQ        F+                T   P   + 
Sbjct: 1   MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGTGATPTAGNV 60

Query: 51  NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
            + A           + +  V+       G I+ +G     L L+        +  +   
Sbjct: 61  PAAAPGAAPTTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPD--LYIT 118

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT---PTTPIKLVFK---NAN 164
           L      + Y A    +      + PN N V+  +     +       +KL F+      
Sbjct: 119 LFDHTAGHTYLARTGLL----GGDFPNHNDVYTEVGNGPTSLSGDQNTLKLSFESPVKGG 174

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAV 223
             + +        Y+  +   + N     +  +    ++R      T  F     G    
Sbjct: 175 VKVVKTYTFTRGSYVIGVDTKIENVGTTPVTPTVYMELVRDNTAVETPMFSHTFLGPAVY 234

Query: 224 LGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
              K   +  +SD++K+         N W+ +   Y+AS +IP +               
Sbjct: 235 TDAKHFQKINFSDLDKNKADYVTSADNGWVAMVQHYFASAWIPQQG--VKRDIYAEKIDP 292

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
             Y+        TI PG+S      LFAG +E   +         P  E++ D+GW   I
Sbjct: 293 TLYRVGVKQPVATIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTII 347

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           AKP+F L+   +  VGN+G AI+L T+ +K +FFPL+   Y S A MK I P++  LRE+
Sbjct: 348 AKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRER 407

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           F +S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI
Sbjct: 408 F-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWI 466

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DL+  DP                     I P++M++SMF+Q K++P P D  QA ++ +
Sbjct: 467 HDLSQRDPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMF 507

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           MP+ F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 508 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 546


>gi|319940691|ref|ZP_08015033.1| inner membrane protein oxaA [Sutterella wadsworthensis 3_1_45B]
 gi|319805842|gb|EFW02609.1| inner membrane protein oxaA [Sutterella wadsworthensis 3_1_45B]
          Length = 565

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 137/575 (23%), Positives = 242/575 (42%), Gaps = 51/575 (8%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEE---MNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
              + + L   +   W N+ V+   E       +            V  +  A       
Sbjct: 7   RALLWVILFGSLFMLWDNYQVWKGGESFFGSVKQEAIEADRSAAAGVPTATVAKTAPALD 66

Query: 63  QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS----------------SNSP 106
            A ++   + +    +  + +  GA+     +  +                      N  
Sbjct: 67  DATAVKEPIVVTTDRMKVTFDRMGARIVGSEMLLFPQQADWTEVGLAGMVLGREPSPNLG 126

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
            V L       +AY A+   V   +     +   + +         +  +          
Sbjct: 127 NVKLFDVEGG-HAYLAQTGLVG-GDYPTHNDEFKLVSQDLALGDKESMKVVFEADKGGLK 184

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVL 224
           + +       +Y   +   VTN +   +      ++ R   KP   ++ +    G     
Sbjct: 185 VTKTFTFKRGYYGIDVDTAVTNTTDKAVTPQIYYQLTRDSSKPAGESSMYSTFTGPAFYT 244

Query: 225 GDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
            +++  +  +S+I           +N WL +   ++ S ++P +    H+  + L  GH 
Sbjct: 245 DEENFQKLSFSEIRDKDAKYVEDTNNGWLAMVQHHFVSAWVPPQGEVRHNYTRAL--GHD 302

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            +      +   I PG + T    L++G +E   +         P  E+++D+GW  F+A
Sbjct: 303 LFAVGTLISLKEIAPGATQTNHAVLYSGPQEQARLEQLA-----PGLELVVDYGWLTFLA 357

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP++ L+ + Y +VGN+G AI+L T  VK + +P++   Y S A MK + P++  L+EK+
Sbjct: 358 KPIYWLLDFLYGIVGNWGWAIVLLTCIVKAVLYPISAAGYRSMARMKEVTPRLKALQEKY 417

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
           K    Q L +AM++LYKT  INP+ GC PI+LQIPVF A+Y V+  S+E+R A +  W+ 
Sbjct: 418 KDDK-QRLNQAMMELYKTEKINPVGGCLPIMLQIPVFLALYWVLQGSVELRGAEWILWVH 476

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DLA  DP                     + P +M+ +MF+Q+ ++P P D  QA ++  M
Sbjct: 477 DLAMPDPWF-------------------VLPALMAATMFLQILLNPKPTDPMQAKVMYIM 517

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           PVVF      F AGL++YW  +N++SI QQ  I K
Sbjct: 518 PVVFSVMFFIFAAGLVLYWLTNNILSIAQQWWINK 552


>gi|258593684|emb|CBE70025.1| putative Inner membrane protein oxaA [NC10 bacterium 'Dutch
           sediment']
          Length = 557

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 127/571 (22%), Positives = 235/571 (41%), Gaps = 33/571 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M       +A+AL+ +I++  Q     P+  + ++E    + V    +   S A+     
Sbjct: 1   MSSQVRALLAVALATVILFGAQFLLPGPKESKESSEPSKQEAVGTATKSPTSPASKAPGP 60

Query: 61  RAQAL-------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
             +         +      ++   +   +  +G       L+ Y         +V L   
Sbjct: 61  LERPQVREVVPRAPEREAIVETDVVRAVLTSRGGALKSWRLKSYRAADGQGVDLVAL--- 117

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
                     L            + +     +S +  + T  I    + +  +   + ++
Sbjct: 118 -QQGELPGPLLVSSGNPEEPAPLDFDIDKAEVSLRSPSETGSITFSSRGSGPLQLSKRLT 176

Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
              + Y  ++  +  N     I  +P    +   P   +   G +   ++          
Sbjct: 177 FKGNSYRVEVEFSWKNTGKKPITIAPE---IAWGPGFYSGVDGERAQVVSATSWVDGRRV 233

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
                            SW  + + Y+A+  +P  +    S          +        
Sbjct: 234 TDDLGSLKGAVTHSGQVSWTALQNLYFAAALLPEGKG---STATIRKGPEEQPVIALVTP 290

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
             ++ PG  +T    +++G K+   ++    D        ++D GWF  +A+P   L+ +
Sbjct: 291 TQSLEPGGGLTQRVAVYSGPKDLDHLNAAGSD-----LSKIVDLGWFDALARPALHLLRF 345

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
              + GN+G+AI+L +V  K++  PL  K   S   MK +QPKI  + E+ K +P Q  Q
Sbjct: 346 LNRISGNYGVAIILVSVLQKIVLHPLTAKSLRSMQAMKALQPKIAAISERNKNNP-QKKQ 404

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           + ++ LYK H +NPL GC P+L+Q+P+F A+Y  +S S+EM  AP + WIKDL+  D   
Sbjct: 405 QEVMGLYKKHGVNPLGGCLPMLIQLPIFVALYNALSSSVEMWRAP-FLWIKDLSQPDALF 463

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWM-PVVFVFA 530
            F ++G+  +         +  ++M  SMF Q KMSPP + D  QA ++ WM P +F F 
Sbjct: 464 AFDVWGLKDY------PFNLLALLMGASMFFQQKMSPPSSSDPQQAKLMLWMMPTMFTFM 517

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
             +FP+GL++YW  SN++ + QQ  + K   
Sbjct: 518 FWTFPSGLVLYWLVSNILQMGQQQWLQKRGK 548


>gi|294505626|ref|YP_003569688.1| membrane protein [Yersinia pestis Z176003]
 gi|262363791|gb|ACY60512.1| membrane protein [Yersinia pestis D106004]
 gi|262367727|gb|ACY64284.1| membrane protein [Yersinia pestis D182038]
 gi|294356085|gb|ADE66426.1| membrane protein [Yersinia pestis Z176003]
          Length = 529

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 138/556 (24%), Positives = 241/556 (43%), Gaps = 54/556 (9%)

Query: 16  IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75
           +I  AWQ         +   +  N  T  + +Q                      + +K 
Sbjct: 1   MIWQAWQVDNNPQPTAQTTQQTTNTATGDKASQAVPGS------------GQGQLITVKT 48

Query: 76  PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135
             L  +IN +G   +  NL  Y   + S++    L   +     Y A+            
Sbjct: 49  DVLSLTINTRGGDIEQANLLAYPDTLGSSNTFELL--ETTPSFVYQAQSGLTGKNGPDNP 106

Query: 136 PNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL-FKIVDTVTNN 189
            N +     +               I L F + +  +F +T  L  +     +   V N 
Sbjct: 107 ANGDRPLFEVPQTSFVLADGQDELRIPLTFTSKDGSVFIKTFVLKRNDYAIGVDYHVNNA 166

Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQKY-SDIEKSSIS 243
           S   +  +  G++ +      K  T +N F +Q    A         +KY     +    
Sbjct: 167 SAAPLELTLFGQLKQSINLPKKRDTGSNNFALQTYRGAAYSSDETKYKKYSFSDIEDKNL 226

Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303
           +      W+ +  +Y+A+ +IP+      + F     G+      F    + I PG+   
Sbjct: 227 DITTKGGWVAMLQQYFATAWIPAANE--TNTFYSAELGNGLAAIGFKGAPVVIQPGEQKQ 284

Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363
            +  L+ G +    +         P  ++ +D+GW +FI++P+F L+ + ++ VGN+G +
Sbjct: 285 LSATLWVGPEIQNKMAEIA-----PHLDLTVDYGWLWFISQPLFKLLKFIHSFVGNWGFS 339

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I++ T  V+ + +PL K QY S A M+ +QPK+  +RE+      Q + + M+ LYK   
Sbjct: 340 IIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMSQEMMALYKAEK 398

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A DP             
Sbjct: 399 VNPLGGCLPLIIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYY----------- 447

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
                   I PI+M ++M+   KMSP    D  Q  I+ +MPV+F      FPAGL++Y+
Sbjct: 448 --------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGLVLYY 499

Query: 543 SWSNVISIVQQAVIMK 558
             SN+++I+QQ +I +
Sbjct: 500 IVSNLVTILQQQLIYR 515


>gi|107024094|ref|YP_622421.1| inner membrane protein translocase component YidC [Burkholderia
           cenocepacia AU 1054]
 gi|116691180|ref|YP_836803.1| putative inner membrane protein translocase component YidC
           [Burkholderia cenocepacia HI2424]
 gi|123071851|sp|Q1BSF7|OXAA_BURCA RecName: Full=Inner membrane protein oxaA
 gi|166975851|sp|A0KBN3|OXAA_BURCH RecName: Full=Inner membrane protein oxaA
 gi|105894283|gb|ABF77448.1| protein translocase subunit yidC [Burkholderia cenocepacia AU 1054]
 gi|116649269|gb|ABK09910.1| protein translocase subunit yidC [Burkholderia cenocepacia HI2424]
          Length = 552

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 146/575 (25%), Positives = 237/575 (41%), Gaps = 44/575 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M+        I     ++    WQ        F+                T         
Sbjct: 1   MDIKRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATHTAPAAAGGASGTSATTAGDVP 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
           + AA          + +  V+       G I+ +G     L L+          P + + 
Sbjct: 61  AAAAGAAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLYIT 117

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILF 168
              +T    +     +   +     +  T  N  S  +      +KL F+        + 
Sbjct: 118 LFDHTAGHTYLARTGLLGGDFPNHNDVYTQLNPGSTSLTGDENTLKLSFESPVKGGVKVV 177

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDK 227
           +        Y+  +   + N     +  +    ++R      T  F     G       K
Sbjct: 178 KTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAK 237

Query: 228 SLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
              +  +SD++K+  +      N W+ +   Y+AS +IP +                 Y+
Sbjct: 238 HFQKIDFSDLDKNKANFEKSSDNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPTLYR 295

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
                    I PG+S      LFAG +E   +         P  E++ D+GW   IAKP+
Sbjct: 296 VGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPL 350

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+   +  VGN+G AI+L TV +K +FFPL+   Y S A MK I P++  LRE+F +S
Sbjct: 351 FWLLEKIHGYVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KS 409

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+
Sbjct: 410 DPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLS 469

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
             DP                     I P++M++SMF+Q  ++P P D  QA ++ +MP+ 
Sbjct: 470 QRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIA 510

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 511 FSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 545


>gi|206558829|ref|YP_002229589.1| putative inner membrane protein translocase component YidC
           [Burkholderia cenocepacia J2315]
 gi|254772759|sp|B4E7D5|OXAA_BURCJ RecName: Full=Inner membrane protein oxaA
 gi|198034866|emb|CAR50738.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 552

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 147/575 (25%), Positives = 238/575 (41%), Gaps = 44/575 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M+        I     ++    WQ        F+                T         
Sbjct: 1   MDIKRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATHTAPAAAGGASGTGATTAGDVP 60

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
           + AA          + +  V+       G I+ +G     L L+          P + + 
Sbjct: 61  AAAAGAAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLYIT 117

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILF 168
              +T    +     +   +     +  T  N  S  +      +KL F+        + 
Sbjct: 118 LFDHTAGHTYLARTGLLGGDFPNHNDVYTQLNPGSTSLTGDQNTLKLSFESPVKGGVKVV 177

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDK 227
           +        Y+  +   + N     +  +    ++R      T  F     G       K
Sbjct: 178 KTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAK 237

Query: 228 SLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
              +  +SD++K+  +      N W+ +   Y+AS +IP +               A Y+
Sbjct: 238 HFQKIDFSDLDKNKANFEKSADNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPALYR 295

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
                    I PG+S      LFAG +E   +         P  E++ D+GW   IAKP+
Sbjct: 296 VGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPL 350

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+   +  VGN+G AI+L TV +K +FFPL+   Y S A MK I P++  LRE+F +S
Sbjct: 351 FWLLEKIHGYVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KS 409

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+
Sbjct: 410 DPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLS 469

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
             DP                     I P++M++SMF+Q  ++P P D  QA ++ +MP+ 
Sbjct: 470 QRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIA 510

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 511 FSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 545


>gi|261378187|ref|ZP_05982760.1| membrane protein insertase, YidC/Oxa1 family [Neisseria cinerea
           ATCC 14685]
 gi|269145655|gb|EEZ72073.1| membrane protein insertase, YidC/Oxa1 family [Neisseria cinerea
           ATCC 14685]
          Length = 545

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 139/575 (24%), Positives = 244/575 (42%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q V    +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      + L  Y  +   N P  TL + S     Y
Sbjct: 56  ----------ITVTTDTVKAVIDEKSGDLRQMTLLKYKANGDENKPF-TLFNDSKEY-TY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L   N         +      ++L     N +  ++  +   + YL
Sbjct: 104 VAQSELLDAQGNNILKGVNFTAAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237
             +   +TN S      S   RI+R + +     +      G +    +    +  +SD+
Sbjct: 164 VNVRFDITNTSGKPANLSADYRIVRDRSEPEGQGYFTRSFVGPVVYTPEGKFQKVNFSDL 223

Query: 238 EKSSISNFHE-------SNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S  +E          WLG+ + ++ S +I   +           +          
Sbjct: 224 DDDAKSGKNEAEYARKTQTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDNL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y    S     I  G     +  L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ +DP                     I P+IM+++MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRSDPYY-------------------ILPVIMAVTMFAQTFLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSAMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533


>gi|323143418|ref|ZP_08078103.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           [Succinatimonas hippei YIT 12066]
 gi|322416823|gb|EFY07472.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           [Succinatimonas hippei YIT 12066]
          Length = 548

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 129/533 (24%), Positives = 230/533 (43%), Gaps = 38/533 (7%)

Query: 44  KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
              +    + A +  +  A +      +++K+ +L  +++LKG    D  L     ++  
Sbjct: 30  AAVSAEQAAQAEIFNNSIAASEGAGKLIKIKSDALELTVDLKGGDIVDAKLCKVKQELGK 89

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
           + P   L+S  N      + L      ++   P   T  N         T  + L F+  
Sbjct: 90  DDPFHLLMSEPNFVYLAQSGLTGKDGPDSKVRPTFTTDANEYVLADGEDTLSVNLTFEQD 149

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
                +      + Y+  +   V NNS   +  +  G++ +    +     G        
Sbjct: 150 GVTYVKTYTLNRDSYVVDVSYKVVNNSGKDLSMAFYGQLKQTVDVSQQQNSGAFGMVAGA 209

Query: 224 L-------GDKSLVEQKYSD----IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
                         ++ + D     ++    N      W+ +   Y+ + +I   + +  
Sbjct: 210 YRGSAYSTDSTRYEKETFDDLVDLSKEKQNLNVQTKGGWVAMIQHYFVASWIGDTDENVE 269

Query: 273 SQFKYLSDGHARY-QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
           +     S    R            I  G      + ++ G K    +     +L  P  +
Sbjct: 270 NVIYSNSSNADRDAIIGIRTEPTVIQNGSEHDFKSKMWIGPKNQDNM-----ELVAPNLD 324

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           + +D+GW +FI+ P+F ++ + ++ +GN+G +I++ T+ V+ + FPL K QY S A M+ 
Sbjct: 325 LTVDYGWLWFISIPLFKILEFIHSYIGNWGFSIIVLTLVVRSVLFPLTKAQYTSMAKMRL 384

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           + PK+ ELRE++K    Q L +  ++LYKT  +NPL GC+P+L+Q+P+F A+Y  +  S 
Sbjct: 385 LTPKMQELRERYKD-DRQKLGQETMRLYKTEKVNPLGGCFPLLIQMPIFIALYWTLMEST 443

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+RHAPF GWI DL+  DP                     + P++  ++M+   KMSP P
Sbjct: 444 ELRHAPFIGWIADLSVHDPYF-------------------VTPLLYGVTMYFIQKMSPTP 484

Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             D  Q  ++  MP VF F   +FPAGL +YW  SN  +I QQ +I K    +
Sbjct: 485 ITDPMQRKVMMAMPFVFTFMFCTFPAGLTLYWLVSNCFTIFQQIIIYKSLEKK 537


>gi|167568260|ref|ZP_02361134.1| putative inner membrane protein translocase component YidC
           [Burkholderia oklahomensis C6786]
          Length = 497

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 220/500 (44%), Gaps = 40/500 (8%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128
             V        G I+ +G     L L+           +   L      + Y A    + 
Sbjct: 22  QLVRFSTDVYDGEIDTRGGTLAKLTLKK--EGDGKQPDLFVTLFDHAANHTYLARTGLL- 78

Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISLDEHYLFKIV 183
                + PN N V+  ++G          L             + +        Y+  + 
Sbjct: 79  ---GGDFPNHNDVYAQVAGPTSLSGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVD 135

Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSI 242
             + N     +  +    ++R      T  F     G       K   +  +SD++K+  
Sbjct: 136 TKIDNVGTAPVTPTVYMELVRDNTPVETPLFSHTFLGPAVYTDQKHFQKINFSDVDKNKA 195

Query: 243 SNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301
                  N W+ +   Y+AS +IP +                 Y+         I PG+S
Sbjct: 196 DYVTSADNGWIAMVQHYFASAWIPQQGA--KRDIYVEKIDPTLYRVGVKQPVAAIAPGQS 253

Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361
              +  LFAG +E   +         P  E++ D+GW   IAKP+F L+   +  VGN+G
Sbjct: 254 ADVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWG 308

Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421
            AI+L T+ +K +FFPL+   Y S A MK I P++  LRE+F +S PQ +  A+++LYKT
Sbjct: 309 WAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMNAALMELYKT 367

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
             +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+  DP           
Sbjct: 368 EKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYF--------- 418

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541
                     I P++M++SMF+Q K++P P D  QA ++ +MP+ F      FPAGL++Y
Sbjct: 419 ----------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLY 468

Query: 542 WSWSNVISIVQQAVIMKMHG 561
           +  +NV+SI QQ  I +  G
Sbjct: 469 YVVNNVLSIAQQYYITRTLG 488


>gi|53724898|ref|YP_104854.1| inner membrane protein translocase component YidC [Burkholderia
           mallei ATCC 23344]
 gi|67639597|ref|ZP_00438442.1| inner membrane protein, 60 kDa [Burkholderia mallei GB8 horse 4]
 gi|121600195|ref|YP_994138.1| putative inner membrane protein translocase component YidC
           [Burkholderia mallei SAVP1]
 gi|124386283|ref|YP_001028205.1| putative inner membrane protein translocase component YidC
           [Burkholderia mallei NCTC 10229]
 gi|126451415|ref|YP_001083056.1| putative inner membrane protein translocase component YidC
           [Burkholderia mallei NCTC 10247]
 gi|167001176|ref|ZP_02266975.1| membrane protein OxaA [Burkholderia mallei PRL-20]
 gi|254174811|ref|ZP_04881472.1| inner membrane protein, 60 kDa [Burkholderia mallei ATCC 10399]
 gi|254201964|ref|ZP_04908328.1| membrane protein OxaA [Burkholderia mallei FMH]
 gi|254207296|ref|ZP_04913647.1| membrane protein OxaA [Burkholderia mallei JHU]
 gi|254359605|ref|ZP_04975876.1| membrane protein OxaA [Burkholderia mallei 2002721280]
 gi|81684886|sp|Q62EM4|OXAA_BURMA RecName: Full=Inner membrane protein oxaA
 gi|166975852|sp|A3MS20|OXAA_BURM7 RecName: Full=Inner membrane protein oxaA
 gi|166975853|sp|A2S8D6|OXAA_BURM9 RecName: Full=Inner membrane protein oxaA
 gi|166975854|sp|A1V7D5|OXAA_BURMS RecName: Full=Inner membrane protein oxaA
 gi|52428321|gb|AAU48914.1| inner membrane protein, 60 kDa [Burkholderia mallei ATCC 23344]
 gi|121229005|gb|ABM51523.1| inner membrane protein, 60 kDa [Burkholderia mallei SAVP1]
 gi|124294303|gb|ABN03572.1| inner membrane protein, 60 kDa [Burkholderia mallei NCTC 10229]
 gi|126244285|gb|ABO07378.1| inner membrane protein, 60 kDa [Burkholderia mallei NCTC 10247]
 gi|147747858|gb|EDK54934.1| membrane protein OxaA [Burkholderia mallei FMH]
 gi|147752838|gb|EDK59904.1| membrane protein OxaA [Burkholderia mallei JHU]
 gi|148028819|gb|EDK86751.1| membrane protein OxaA [Burkholderia mallei 2002721280]
 gi|160695856|gb|EDP85826.1| inner membrane protein, 60 kDa [Burkholderia mallei ATCC 10399]
 gi|238520165|gb|EEP83627.1| inner membrane protein, 60 kDa [Burkholderia mallei GB8 horse 4]
 gi|243063003|gb|EES45189.1| membrane protein OxaA [Burkholderia mallei PRL-20]
          Length = 558

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 150/583 (25%), Positives = 240/583 (41%), Gaps = 56/583 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+        I     ++    WQ  +  P +   N  + N  +        +  +A   
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA 60

Query: 59  DDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
            +   A +                V        G I+ +G     L L           P
Sbjct: 61  ANALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQP 117

Query: 107 IVTL-LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN--- 162
            +++ L      + Y A    +      + PN N V+  ++G          L       
Sbjct: 118 DLSVTLFDHTANHTYLARTGLL----GGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESP 173

Query: 163 --ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEG 219
                 + +        Y+  +   + N     +  S    ++R      T  F     G
Sbjct: 174 VKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLG 233

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
                  K   +  + DI+K+         N W+ +   Y+AS +IP             
Sbjct: 234 PAVYTDQKHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGA--KRDIYVE 291

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
                 Y+         I PG+S   +  LFAG +E   +         P  E++ D+GW
Sbjct: 292 KIDPTLYRVGVKQPVEAIAPGQSADVSARLFAGPEEERMLEGIA-----PGLELVKDYGW 346

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              IAKP+F L+   +  VGN+G AI+L T+ +K +FFPL+   Y S A MK I P++  
Sbjct: 347 VTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQA 406

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           LRE+F +S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+
Sbjct: 407 LRERF-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPW 465

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
             WI DL+  DP                     I P++M++SMF+Q K++P P D  QA 
Sbjct: 466 VLWIHDLSQRDPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAK 506

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           ++ +MP+ F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 507 MMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 549


>gi|126439633|ref|YP_001057148.1| putative inner membrane protein translocase component YidC
           [Burkholderia pseudomallei 668]
 gi|166975856|sp|A3N477|OXAA_BURP6 RecName: Full=Inner membrane protein oxaA
 gi|126219126|gb|ABN82632.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
           pseudomallei 668]
          Length = 558

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 150/583 (25%), Positives = 239/583 (40%), Gaps = 56/583 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+        I     ++    WQ  +  P +   N  + N  +        +   A   
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGANAAAA 60

Query: 59  DDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
            +   A +                V        G I+ +G     L L           P
Sbjct: 61  ANALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQP 117

Query: 107 IVTL-LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN--- 162
            +++ L      + Y A    +      + PN N V+  ++G          L       
Sbjct: 118 DLSVTLFDHTANHTYLARTGLL----GGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESP 173

Query: 163 --ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEG 219
                 + +        Y+  +   + N     +  S    ++R      T  F     G
Sbjct: 174 VKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLG 233

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
                  K   +  + DI+K+         N W+ +   Y+AS +IP             
Sbjct: 234 PAVYTDQKHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGA--KRDIYVE 291

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
                 Y+         I PG+S   +  LFAG +E   +         P  E++ D+GW
Sbjct: 292 KIDPTLYRVGVKQPVAAIAPGQSADVSARLFAGPEEERMLEGIA-----PGLELVKDYGW 346

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              IAKP+F L+   +  VGN+G AI+L T+ +K +FFPL+   Y S A MK I P++  
Sbjct: 347 VTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQA 406

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           LRE+F +S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+
Sbjct: 407 LRERF-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPW 465

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
             WI DL+  DP                     I P++M++SMF+Q K++P P D  QA 
Sbjct: 466 VLWIHDLSQRDPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAK 506

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           ++ +MP+ F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 507 MMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 549


>gi|53717718|ref|YP_106704.1| putative inner membrane protein translocase component YidC
           [Burkholderia pseudomallei K96243]
 gi|76811170|ref|YP_331720.1| putative inner membrane protein translocase component YidC
           [Burkholderia pseudomallei 1710b]
 gi|126453447|ref|YP_001064392.1| putative inner membrane protein translocase component YidC
           [Burkholderia pseudomallei 1106a]
 gi|167813580|ref|ZP_02445260.1| putative inner membrane protein translocase component YidC
           [Burkholderia pseudomallei 91]
 gi|167892205|ref|ZP_02479607.1| putative inner membrane protein translocase component YidC
           [Burkholderia pseudomallei 7894]
 gi|167900716|ref|ZP_02487921.1| putative inner membrane protein translocase component YidC
           [Burkholderia pseudomallei NCTC 13177]
 gi|167916975|ref|ZP_02504066.1| putative inner membrane protein translocase component YidC
           [Burkholderia pseudomallei BCC215]
 gi|217423939|ref|ZP_03455439.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
           pseudomallei 576]
 gi|226193291|ref|ZP_03788901.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
           pseudomallei Pakistan 9]
 gi|237810283|ref|YP_002894734.1| inner membrane protein OxaA [Burkholderia pseudomallei MSHR346]
 gi|242316035|ref|ZP_04815051.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
           pseudomallei 1106b]
 gi|254184152|ref|ZP_04890743.1| membrane protein OxaA [Burkholderia pseudomallei 1655]
 gi|254186623|ref|ZP_04893140.1| membrane protein OxaA [Burkholderia pseudomallei Pasteur 52237]
 gi|254194722|ref|ZP_04901153.1| membrane protein OxaA [Burkholderia pseudomallei S13]
 gi|254262072|ref|ZP_04953126.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
           pseudomallei 1710a]
 gi|254298582|ref|ZP_04966033.1| membrane protein OxaA [Burkholderia pseudomallei 406e]
 gi|81690513|sp|Q63YW1|OXAA_BURPS RecName: Full=Inner membrane protein oxaA
 gi|123600731|sp|Q3JXI3|OXAA_BURP1 RecName: Full=Inner membrane protein oxaA
 gi|166975855|sp|A3NPX1|OXAA_BURP0 RecName: Full=Inner membrane protein oxaA
 gi|52208132|emb|CAH34062.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gi|76580623|gb|ABA50098.1| inner membrane protein, 60 kDa [Burkholderia pseudomallei 1710b]
 gi|126227089|gb|ABN90629.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
           pseudomallei 1106a]
 gi|157808712|gb|EDO85882.1| membrane protein OxaA [Burkholderia pseudomallei 406e]
 gi|157934308|gb|EDO89978.1| membrane protein OxaA [Burkholderia pseudomallei Pasteur 52237]
 gi|169651472|gb|EDS84165.1| membrane protein OxaA [Burkholderia pseudomallei S13]
 gi|184214684|gb|EDU11727.1| membrane protein OxaA [Burkholderia pseudomallei 1655]
 gi|217393002|gb|EEC33024.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
           pseudomallei 576]
 gi|225934891|gb|EEH30868.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
           pseudomallei Pakistan 9]
 gi|237503961|gb|ACQ96279.1| inner membrane protein OxaA [Burkholderia pseudomallei MSHR346]
 gi|242139274|gb|EES25676.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
           pseudomallei 1106b]
 gi|254220761|gb|EET10145.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia
           pseudomallei 1710a]
          Length = 558

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 150/583 (25%), Positives = 240/583 (41%), Gaps = 56/583 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+        I     ++    WQ  +  P +   N  + N  +        +  +A   
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA 60

Query: 59  DDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
            +   A +                V        G I+ +G     L L           P
Sbjct: 61  ANALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQP 117

Query: 107 IVTL-LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN--- 162
            +++ L      + Y A    +      + PN N V+  ++G          L       
Sbjct: 118 DLSVTLFDHTANHTYLARTGLL----GGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESP 173

Query: 163 --ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEG 219
                 + +        Y+  +   + N     +  S    ++R      T  F     G
Sbjct: 174 VKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLG 233

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
                  K   +  + DI+K+         N W+ +   Y+AS +IP             
Sbjct: 234 PAVYTDQKHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGA--KRDIYVE 291

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
                 Y+         I PG+S   +  LFAG +E   +         P  E++ D+GW
Sbjct: 292 KIDPTLYRVGVKQPVAAIAPGQSADVSARLFAGPEEERMLEGIA-----PGLELVKDYGW 346

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              IAKP+F L+   +  VGN+G AI+L T+ +K +FFPL+   Y S A MK I P++  
Sbjct: 347 VTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQA 406

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           LRE+F +S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+
Sbjct: 407 LRERF-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPW 465

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
             WI DL+  DP                     I P++M++SMF+Q K++P P D  QA 
Sbjct: 466 VLWIHDLSQRDPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAK 506

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           ++ +MP+ F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 507 MMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 549


>gi|317484430|ref|ZP_07943344.1| YidC/Oxa1 family membrane protein insertase [Bilophila wadsworthia
           3_1_6]
 gi|316924318|gb|EFV45490.1| YidC/Oxa1 family membrane protein insertase [Bilophila wadsworthia
           3_1_6]
          Length = 534

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 132/568 (23%), Positives = 233/568 (41%), Gaps = 44/568 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+     F+AIAL++ ++ AW     +    +        Q            A      
Sbjct: 1   MDD-KRTFLAIALAIAVLLAWTPLAEHMGWIQPQQRPAATQEATPAPAPAAQTAVAPASS 59

Query: 61  -RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
                 S    V+++ P     I   G       L+ Y   + ++SP V L+SP  ++ A
Sbjct: 60  LPVFTPSAGTDVKVETPLYSAVIYSGGGILRSFTLKHYDETIKADSPKVNLISPEASQTA 119

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
                                 +      +              + +   R IS +    
Sbjct: 120 PLGLTV----NGQPSWSTGQWSFQGSDLNLKAGEQGSLTFTGIVDGVRVTRVISFNADNY 175

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
               + +  ++    R    G  +   P +           +A   ++S  E+  +    
Sbjct: 176 LLSENILVGSADQAPRTVRLGFTVAATPFSNGKY---DPTRLAWDANESFKEETSASTLA 232

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
                     +W G+   Y+ +V  P+     +   K    G     A    + +T   G
Sbjct: 233 EKGIIEQGVFNWAGVMSNYFMNVTAPAD--PNNLTLKGRVQGDVWRLALERPDLLTPSNG 290

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359
             +      + G K+   +               +++G F  IA+P+  ++++F++ VGN
Sbjct: 291 GEVPVAVNWWFGPKDRTMLATAPD-----HLSQAVNFGMFSIIARPLLTILAFFHSFVGN 345

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +GIAI++ T  ++++F+PL++K + S   MK +QP + +LREK K      L K M+QLY
Sbjct: 346 WGIAILMLTFCIRVVFWPLSQKSFKSMEQMKKLQPMMKKLREKHKDDKE-ALNKEMMQLY 404

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKDLAAADPT 471
           KT+ +NP  GC PI++QIPVF  +Y+ +  S+E+RHA            W+ DL+AADP 
Sbjct: 405 KTYKVNPAGGCLPIVVQIPVFIGLYQALLNSIELRHASFIEYLPFTHITWLADLSAADPF 464

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531
                               I P++M  SMF+Q +++P   D  Q  ++ +MPV+F    
Sbjct: 465 Y-------------------ITPLLMGASMFLQQRLTPAAGDPTQQKVMMFMPVIFTVMF 505

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            +FPAGL+IYW  +N++SI QQ  +++ 
Sbjct: 506 INFPAGLVIYWLCNNILSIGQQWWMLRK 533


>gi|213650173|ref|ZP_03380226.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
          Length = 484

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 128/498 (25%), Positives = 228/498 (45%), Gaps = 43/498 (8%)

Query: 75  NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE 134
              L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y A+           
Sbjct: 1   TDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIYQAQSGLTGRDGPDN 58

Query: 135 LPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTN 188
             N       +               + + + +A    F +T       Y   +  +V N
Sbjct: 59  PANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFKRGDYAVNVNYSVQN 118

Query: 189 NSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSS 241
                +  S  G++ +         T ++ F +     A          + K+  I  + 
Sbjct: 119 TGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNE 178

Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301
             N      W+ +  +Y+A+ +IP  + + +  F   + G+      + A  + + PG++
Sbjct: 179 NLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAIGYKAQPVLVQPGQT 236

Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361
              T+ L+ G +    +         P  ++ +D+GW +FI++P+F L+ + ++ VGN+G
Sbjct: 237 GAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWG 291

Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421
            +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+      Q   + M+ LYK 
Sbjct: 292 FSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRQSQEMMALYKA 350

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
             +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A DP           
Sbjct: 351 EKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSAQDPYY--------- 401

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLII 540
                     I PI+M ++MF   KMSP    D  Q  I+ +MPV+F      FP+GL++
Sbjct: 402 ----------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVL 451

Query: 541 YWSWSNVISIVQQAVIMK 558
           Y+  SN+++I+QQ +I +
Sbjct: 452 YYIVSNLVTIIQQQLIYR 469


>gi|218885990|ref|YP_002435311.1| hypothetical protein DvMF_0888 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|259515682|sp|B8DP11|OXAA_DESVM RecName: Full=Inner membrane protein oxaA
 gi|218756944|gb|ACL07843.1| 60 kDa inner membrane insertion protein [Desulfovibrio vulgaris
           str. 'Miyazaki F']
          Length = 539

 Score =  310 bits (794), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 134/576 (23%), Positives = 232/576 (40%), Gaps = 56/576 (9%)

Query: 2   ERNWNYFVAIALSVIIVYAWQN------FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55
             +    +AIALS +++  W        +   P  +    E     +   P     + A 
Sbjct: 1   MESKRAIIAIALSFVVLVGWSYLADHMGWNGQPAPQAQQEETAPSASQAAPQSASQAAAP 60

Query: 56  VL-IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
               +      S    V +  P     ++  G      +L  Y   +++ +P V ++  +
Sbjct: 61  APRAETPVFLPSAGREVTVVTPLYKAVLHSGGGVLKHFSLTRYRTAITAGAPAVDMVDTA 120

Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERT 171
           +T  +    L       N +   +   W+   G +              +     +    
Sbjct: 121 STVMSPLGLLI------NGQPSWNTGQWSFDGGDLSLGAGQSGVLTFTGEVDGVRVVREL 174

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
               + YL      +   +  +      G  +     +             +       +
Sbjct: 175 TFSADTYLISEKVRLAPLADARTVR--LGFTVGTGNLSPNGGQYDHTRVAWLHDGSFSEK 232

Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
              SD+          + SW  +   Y+     P   T    + K        Y+     
Sbjct: 233 TSASDL--EKGVLETGALSWGAVMSNYFLVAAAPVDTTGVTLKGKLQEG---VYRVAMER 287

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
            +++I  G   T     + G K+   +               I+ GWF  IA+P+  ++ 
Sbjct: 288 GDVSIPAGGETTVACNYWFGPKDRGLLKEAPNQ-----LAEAINLGWFSIIARPLVDMLE 342

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           +F+  VGN+G+AI+L TV +KL+F+PL+ K Y S   MK +QP + +LREK      ++ 
Sbjct: 343 FFHKYVGNYGVAIILLTVVIKLVFWPLSHKSYKSMEQMKKLQPMLQKLREKHGDDREKM- 401

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIK 463
            + M++LYKT+ +NP  GC P+L+QIPVFF +Y+ +  ++E+RHA F          W+ 
Sbjct: 402 NEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHASFITHLPFTDMVWLA 461

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DL+A DP                     I PI+M  +M +Q K++P P D  QA I+ +M
Sbjct: 462 DLSAKDPYY-------------------ITPIVMGATMLLQQKLTPAPGDPTQAKIMMFM 502

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           PVVF F   SFP+GL++YW  +NV+SI QQ  +++ 
Sbjct: 503 PVVFTFMFLSFPSGLVVYWLCNNVLSIAQQWWMLRK 538


>gi|170734513|ref|YP_001766460.1| putative inner membrane protein translocase component YidC
           [Burkholderia cenocepacia MC0-3]
 gi|254772758|sp|B1K0Y4|OXAA_BURCC RecName: Full=Inner membrane protein oxaA
 gi|169817755|gb|ACA92338.1| 60 kDa inner membrane insertion protein [Burkholderia cenocepacia
           MC0-3]
          Length = 553

 Score =  310 bits (794), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 146/576 (25%), Positives = 240/576 (41%), Gaps = 45/576 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNE--------RKNIQTVKQPNQVD 50
           M+        I     ++    WQ  +  P +   +            +           
Sbjct: 1   MDIKRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATHTAPAAAGGASGTGATTTAGDV 60

Query: 51  NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
            + AA          + +  V+       G I+ +G     L L+          P + +
Sbjct: 61  PAAAAGAAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLYI 117

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNIL 167
               +T    +     +   +     +  T  N  S  +      +KL F+        +
Sbjct: 118 TLFDHTAGHTYLARTGLLGGDFPNHNDVYTQLNPGSTSLTGDQNTLKLSFESPVKGGVKV 177

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGD 226
            +        Y+  +   + N     +  +    ++R      T  F     G       
Sbjct: 178 VKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDA 237

Query: 227 KSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           K   +  +SD++K+  +      N W+ +   Y+AS +IP +               A Y
Sbjct: 238 KHFQKIDFSDLDKNKANFEKSADNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPALY 295

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
           +         I PG+S      LFAG +E   +         P  E++ D+GW   IAKP
Sbjct: 296 RVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKP 350

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+   +  VGN+G AI+L TV +K +FFPL+   Y S A MK I P++  LRE+F +
Sbjct: 351 LFWLLEKIHGYVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-K 409

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
           S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL
Sbjct: 410 SDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDL 469

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525
           +  DP                     I P++M++SMF+Q  ++P P D  QA ++ +MP+
Sbjct: 470 SQRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPI 510

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 511 AFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 546


>gi|167834935|ref|ZP_02461818.1| putative inner membrane protein translocase component YidC
           [Burkholderia thailandensis MSMB43]
          Length = 489

 Score =  310 bits (794), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 139/504 (27%), Positives = 219/504 (43%), Gaps = 34/504 (6%)

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNAY 120
               + +  V        G I+ +G     L L           P +++ L  +   + Y
Sbjct: 7   DAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPDLSVTLFDNAANHTY 63

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A    +             V    S         +         +   +T +     Y+
Sbjct: 64  LARTGLLGGDFPNHNDIYAQVAGPTSLSAGQNALKLSFESPVKGGVKVVKTYTFTRGSYV 123

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIE 238
             +   + N     +  S    ++R      T  F     G       K   +  +SDI+
Sbjct: 124 IGVDTKIENVGTTPVTPSVYMELVRDNTSVETPMFSHTFLGPAVYTDQKHFQKITFSDID 183

Query: 239 KSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
           K+         N W+ +   Y+AS +IP                   Y+         I 
Sbjct: 184 KNKADYVPSADNGWIAMVQHYFASAWIPQAGA--KRDIYVEKIDPTLYRVGVKQPVAAIA 241

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
           PG+S   +  LFAG +E   +         P  E++ D+GW   IAKP+F L+   +  V
Sbjct: 242 PGQSADVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFV 296

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
           GN+G AI+L T+ +K +FFPL+   Y S A MK I P++  LRE+F +S PQ +  A+++
Sbjct: 297 GNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMNAALME 355

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+  DP       
Sbjct: 356 LYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYF----- 410

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537
                         I P++M++SMF+Q K++P P D  QA ++ +MP+ F      FPAG
Sbjct: 411 --------------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAG 456

Query: 538 LIIYWSWSNVISIVQQAVIMKMHG 561
           L++Y+  +NV+SI QQ  I +  G
Sbjct: 457 LVLYYVVNNVLSIAQQYYITRTLG 480


>gi|325139560|gb|EGC62100.1| inner membrane protein OxaA [Neisseria meningitidis CU385]
          Length = 545

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 139/575 (24%), Positives = 243/575 (42%), Gaps = 58/575 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A++++I+  W+  +  P+      +    Q V    +   + A      
Sbjct: 1   MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      + L  Y  + + N P    L   + +  Y
Sbjct: 56  ----------ITVTTDTVKAVIDEKSGDLRQMTLLKYKANGNENKPFS--LFDDSKEYTY 103

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L   N         +      ++L     N +  ++  +   + YL
Sbjct: 104 VAQSELLDAQGNNILKGVNFTAAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237
             +   +TN S      S   RI+R   Q     +      G +    +    +  +SD+
Sbjct: 164 VNVRFDITNTSGKPANLSADYRIVRDHSQPEGQGYFTRSYLGPVVYTPEDKFQKVSFSDL 223

Query: 238 EKSSISNFHE-------SNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +  + S  +E          WLG+ + ++ S +I   +           +          
Sbjct: 224 DDDAKSGKNEAEYARKTQTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDNL 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y    S     I  G     +  L+AG +    I +   +      ++  D+G  ++ A 
Sbjct: 284 YSTSVSVPLAAIQNGTKSEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+ 
Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                  Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI D
Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+ +DP                     I PIIM+++MF Q  ++PPP D  QA ++  MP
Sbjct: 458 LSRSDPYY-------------------ILPIIMAVTMFAQTFLNPPPTDPMQAKMMKIMP 498

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTITQQWHINRS 533


>gi|303247340|ref|ZP_07333613.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio
           fructosovorans JJ]
 gi|302491254|gb|EFL51143.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio
           fructosovorans JJ]
          Length = 537

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 148/556 (26%), Positives = 239/556 (42%), Gaps = 53/556 (9%)

Query: 20  AWQNFYVYPRIEEMNNERKNIQTVKQPNQVD---NSYAAVLIDDRAQALSMSPRVELKNP 76
            W   +               Q             + A       A A +    + +  P
Sbjct: 19  GWNFLFPTKPPVPKTETTTQTQAPAPDKPAPGKTEAQAPKAETLAAFAPTPGKTLTVDTP 78

Query: 77  SLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELP 136
                 N  G      +L+ Y   ++++SP+V L++      A    +       N    
Sbjct: 79  LYTAVFNSTGGLLSRFSLKQYRQTIAADSPLVDLINEKAHAKAPLGLIL------NGTPT 132

Query: 137 NSNTVWNLISGKILTPTT---PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193
             N  W++  G +    +    +  V +  + I+         +YL     +++N   + 
Sbjct: 133 WQNVEWSVQGGDVTLDASGTASVTFVGRMGDTIIKRVLTFSGSNYLIDEKLSLSNTGANP 192

Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253
            R      +   +     +++   +   A   D S +E  +S+ + +      +   W  
Sbjct: 193 ARERLSMTVAVDRLSAEGDSYNPTQ---AAFYDTSGLELFHSEKKLAEGIADEKPVEWGA 249

Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313
           I   Y+    IP   T    + K        ++     + + I  G     T   + G K
Sbjct: 250 IMSNYFLVGVIPDT-TDLRGKAKIEDG---LFRLAVDKDGLEIPAGGRQDLTISYYLGPK 305

Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373
               +      +A       ID+GWF FIAKP+  L+ +FYN VGN+G+AI+L TV +K 
Sbjct: 306 APKFL-----AMAPHHLSAAIDYGWFDFIAKPLVKLLHFFYNYVGNYGVAIILLTVLIKA 360

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433
           +F+PL+ K Y S   MK +QP + +LREK+K    Q + + M+QLYKT+ +NP  GC P+
Sbjct: 361 IFWPLSHKSYKSMEQMKKLQPLLSQLREKYKD-DRQKMNEEMMQLYKTYKVNPAGGCLPM 419

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFW--------GWIKDLAAADPTNIFTLFGILPFYLP 485
           ++QIPVFF +Y+ +  S+E+RHA F          W+ DL+A DP               
Sbjct: 420 VVQIPVFFGLYQALLHSIELRHAAFITYFPFTHHIWLADLSAKDPYY------------- 466

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
                 I P+IM  +MF+Q KM+P P D  QA I+  MPV+F F   +FP+GL++YW  +
Sbjct: 467 ------ITPLIMGATMFLQQKMTPAPGDPTQAKIMLLMPVIFTFMFLNFPSGLVVYWLVN 520

Query: 546 NVISIVQQAVI-MKMH 560
           NVISI QQ  +  K H
Sbjct: 521 NVISIAQQYWMLNKKH 536


>gi|83719666|ref|YP_443729.1| inner membrane protein translocase component YidC [Burkholderia
           thailandensis E264]
 gi|167620894|ref|ZP_02389525.1| putative inner membrane protein translocase component YidC
           [Burkholderia thailandensis Bt4]
 gi|123536100|sp|Q2STM0|OXAA_BURTA RecName: Full=Inner membrane protein oxaA
 gi|83653491|gb|ABC37554.1| inner membrane protein, 60 kDa [Burkholderia thailandensis E264]
          Length = 557

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 151/582 (25%), Positives = 243/582 (41%), Gaps = 55/582 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+        I     ++    WQ  +  P +   N  + N  +        +  +A   
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA 60

Query: 59  DDRAQALSMS-----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
           +    A + +             V        G I+ +G     L L           P 
Sbjct: 61  NALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPD 117

Query: 108 VTL-LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN---- 162
           +++ L  +   + Y A    +      + PN N V+   +G          L        
Sbjct: 118 LSVTLFDNAANHTYLARTGLL----GGDFPNHNDVYTQAAGPTSLAAGQNTLKLAFESPV 173

Query: 163 -ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGF 220
                + +        Y+  +   + N     +  S    ++R      T  F     G 
Sbjct: 174 KGGVKVVKTYTFTRGSYVIGVDTKIENVGTAPVTPSVYMELVRDNTSVETPMFSHTFLGP 233

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                 K   +  +SDI+K+         N W+ +   Y+AS +IP +            
Sbjct: 234 AVYTDQKHFQKITFSDIDKNKADYVTSADNGWIAMVQHYFASAWIPQQGA--KRDIYVEK 291

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
                Y+         I PG+S   +  LFAG +E   +         P  E++ D+GW 
Sbjct: 292 IDPTLYRVGVKQPVAAIAPGQSADVSARLFAGPEEERMLEGIA-----PGLELVKDYGWV 346

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             IAKP+F L+   +  VGN+G AI+L T+ +K +FFPL+   Y S A MK I P++  L
Sbjct: 347 TIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQAL 406

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           RE+F +S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+ 
Sbjct: 407 RERF-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWI 465

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            WI DL+  DP                     I P++M++SMF+Q K++P P D  QA +
Sbjct: 466 LWIHDLSQRDPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKM 506

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           + +MP+ F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 507 MMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 548


>gi|167587875|ref|ZP_02380263.1| putative inner membrane protein translocase component YidC
           [Burkholderia ubonensis Bu]
          Length = 504

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 137/500 (27%), Positives = 226/500 (45%), Gaps = 35/500 (7%)

Query: 67  MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126
            +  V+       G I+ +G     L L+          P + +    +T +  +     
Sbjct: 28  QAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLYITLFDHTASHTYLARTG 84

Query: 127 VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILFERTISLDEHYLFKIV 183
           +   +     +  +  N     +      +KL F+        + +        Y+  + 
Sbjct: 85  LLGGDFPNHNDVYSQVNAGPTTLSGDQNALKLSFESPVKGGVKVVKTYTFTRGSYVIDVD 144

Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSI 242
             + N     +  +    ++R      T  F     G       K   +  +SD++K+  
Sbjct: 145 TKIDNVGTAPVSPTVYMELVRDNTAVETPMFSHTFLGPAVYTDSKHFQKIDFSDLDKNKA 204

Query: 243 SNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301
           +      N W+ +   Y+AS +IP +               A Y+         I PG+S
Sbjct: 205 NFEKSADNGWVAMVQHYFASAWIPKQG--VKRDIYAEKFDPALYRVGVKQPVGAIAPGQS 262

Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361
              +  LFAG +E   +         P  E++ D+GW   IAKP+F L+   +  VGN+G
Sbjct: 263 ADVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWG 317

Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421
            AI+L T+ +K +FFPL+   Y S A MK I P++  LRE+F +S PQ +  A+++LYKT
Sbjct: 318 WAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMNAALMELYKT 376

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
             +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+  DP           
Sbjct: 377 EKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFF--------- 427

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541
                     I P++M++SMF+Q K++P P D  QA ++ +MP+ F      FPAGL++Y
Sbjct: 428 ----------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLY 477

Query: 542 WSWSNVISIVQQAVIMKMHG 561
           +  +NV+SI QQ  I +  G
Sbjct: 478 YVVNNVLSIAQQYYITRKLG 497


>gi|167582766|ref|ZP_02375640.1| putative inner membrane protein translocase component YidC
           [Burkholderia thailandensis TXDOH]
          Length = 557

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 151/582 (25%), Positives = 243/582 (41%), Gaps = 55/582 (9%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+        I     ++    WQ  +  P +   N  + N  +        +  +A   
Sbjct: 1   MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA 60

Query: 59  DDRAQALSMS-----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
           +    A + +             V        G I+ +G     L L           P 
Sbjct: 61  NALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPD 117

Query: 108 VTL-LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN---- 162
           +++ L  +   + Y A    +      + PN N V+   +G          L        
Sbjct: 118 LSVTLFDNAANHTYLARTGLL----GGDFPNHNDVYTQAAGPTSLAADQNTLKLAFESPV 173

Query: 163 -ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGF 220
                + +        Y+  +   + N     +  S    ++R      T  F     G 
Sbjct: 174 KGGVKVVKTYTFTRGSYVIGVDTKIENVGTAPVTPSVYMELVRDNTSVETPMFSHTFLGP 233

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                 K   +  +SDI+K+         N W+ +   Y+AS +IP +            
Sbjct: 234 AVYTDQKHFQKITFSDIDKNKADYVTSADNGWIAMVQHYFASAWIPQQGA--KRDIYVEK 291

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
                Y+         I PG+S   +  LFAG +E   +         P  E++ D+GW 
Sbjct: 292 IDPTLYRVGVKQPVAAIAPGQSADVSARLFAGPEEERMLEGIA-----PGLELVKDYGWV 346

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             IAKP+F L+   +  VGN+G AI+L T+ +K +FFPL+   Y S A MK I P++  L
Sbjct: 347 TIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQAL 406

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           RE+F +S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+ 
Sbjct: 407 RERF-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWI 465

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            WI DL+  DP                     I P++M++SMF+Q K++P P D  QA +
Sbjct: 466 LWIHDLSQRDPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKM 506

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           + +MP+ F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 507 MMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 548


>gi|297570495|ref|YP_003691839.1| membrane protein insertase, YidC/Oxa1 family [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296926410|gb|ADH87220.1| membrane protein insertase, YidC/Oxa1 family [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 560

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 146/575 (25%), Positives = 246/575 (42%), Gaps = 36/575 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             N+   +AI LS+ ++  +Q  ++ P     +   +  +   + +    + +   + D 
Sbjct: 1   MDNYRALIAIVLSMAVLLIYQFLFMPPPAPVTDAPGEAERVAAERSPAAEALSPADLADP 60

Query: 62  A---------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
           A                    +  + +K       I+  G       L  +   V   SP
Sbjct: 61  ALVEEAQRPVDVASLLDPADRAREIRVKTGLYTAVISEAGGVLQSFTLNEFRETVDPGSP 120

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
              L+      +       +    +  E+ +       +        T            
Sbjct: 121 PKDLI-RVEPDDGLPLLFSWGVEPSRAEMLHYTADRERLVVGQGQERTLTLRAQSPLGLE 179

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
                   D  YL  +   V N     ++ +P   ++ ++P  AT        F      
Sbjct: 180 FIRTYTFRDGDYLIDVAVEVVNRGEVPLQGAPYLTLV-NRPFVATGDPLEHFLFTGPAAL 238

Query: 227 KSLVEQKYSDIEKSSISNFHESNS---WLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
                Q+    + +             W G  D Y+ +  IP       + F    D   
Sbjct: 239 VDNEVQQVKVKDLAGERAGRSFTGRVRWAGYHDSYFLTSIIPLATDQATAHFSSRRD--E 296

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
                 ++    I  G +      ++ G K+   ++    D         +++GWF F+A
Sbjct: 297 LVTTVLASAADIIPAGGAHRYDYMVYFGPKKLTLLNELGHD-----LARAVNFGWFDFLA 351

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           +P F L+ + Y LVGN+G+AI+L T+ +K  F+PL +K   S   M+ IQPK+ +LREK+
Sbjct: 352 RPTFYLLHFLYGLVGNYGVAIILVTIIIKAAFWPLTQKGLKSMKVMQKIQPKMTKLREKY 411

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
           K    Q  Q+ M++LY+T+ +NPL GC P+LLQIPVFFA+YKV+  S+E+RHAPF  WI 
Sbjct: 412 KD-DRQRQQQEMLKLYQTYKVNPLGGCLPMLLQIPVFFALYKVLLQSIELRHAPFMLWIN 470

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DL+A D   I        F +P    + +  ++M+LSMF+Q KM+P   D  QA I+ ++
Sbjct: 471 DLSAPDRLYIG-------FDIPWLGGIPVLTLLMALSMFVQQKMTPIS-DPMQARIMLFL 522

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           PVVF F   +F +GL++YW  +NV++I QQ +I +
Sbjct: 523 PVVFFFLFLNFASGLVLYWFINNVLTIAQQYMIYR 557


>gi|134297399|ref|YP_001121134.1| putative inner membrane protein translocase component YidC
           [Burkholderia vietnamiensis G4]
 gi|166975857|sp|A4JJ46|OXAA_BURVG RecName: Full=Inner membrane protein oxaA
 gi|134140556|gb|ABO56299.1| protein translocase subunit yidC [Burkholderia vietnamiensis G4]
          Length = 554

 Score =  309 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 143/577 (24%), Positives = 242/577 (41%), Gaps = 46/577 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+        I     ++    WQ  +  P +   +  +         +    +  A   
Sbjct: 1   MDIKRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATQTAPAAASGASGTGATTTAGEA 60

Query: 59  DDRAQALSMSP---------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
              A A +             V+       G I+ +G     L L+          P + 
Sbjct: 61  PAAAAAGAAPATTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLY 117

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNI 166
           +    +T    +     +   +     +  T  N  +  +      +KL F+        
Sbjct: 118 ITLFDHTAGHTYLARTGLLGGDFPNHNDVYTQLNPGATSLTGDQNTLKLSFESPVKGGVK 177

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLG 225
           + +        Y+  +   + N     +  +    ++R      T  F     G      
Sbjct: 178 VVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTD 237

Query: 226 DKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
            K   +  +SD++K+     +   N W+ +   Y+AS +IP +               + 
Sbjct: 238 AKHFQKINFSDLDKNKADYVNSADNGWVAMVQHYFASAWIPQQG--VKRDIYAEKIDPSL 295

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y+         I PG+S      LFAG +E   +         P  E++ D+GW   IAK
Sbjct: 296 YRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAK 350

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L+   + +VGN+G AI+L T+ +K +FFPL+   Y S A MK I P++  LRE+F 
Sbjct: 351 PLFWLLEKIHGVVGNWGWAIVLLTILIKAVFFPLSAASYKSMARMKEITPRMQALRERF- 409

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
           +S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI D
Sbjct: 410 KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHD 469

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+  DP                     I P++M++SM++Q  ++P P D  QA ++ +MP
Sbjct: 470 LSQRDPFF-------------------ILPVLMAVSMYVQTSLNPTPPDPVQAKMMKFMP 510

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           + F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 511 IAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 547


>gi|241767065|ref|ZP_04764844.1| YidC translocase/secretase [Acidovorax delafieldii 2AN]
 gi|241362388|gb|EER58355.1| YidC translocase/secretase [Acidovorax delafieldii 2AN]
          Length = 495

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 129/502 (25%), Positives = 220/502 (43%), Gaps = 33/502 (6%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128
            RVE+       S + +G       L  +      +     LL   + +  Y A+   + 
Sbjct: 17  ERVEVTTDVYRLSFDSEGGSLTHAELLKHVDMADKSRNF--LLFDESAERVYVAQTGLIG 74

Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVT 187
            +          V    + K       I+    +   +   +T +L    Y   +   V 
Sbjct: 75  GSYPTHKTVMKVVPGPRALKDGENELSIRFESPDLGGVKLVKTWTLKRGSYDMAVAHEVV 134

Query: 188 NNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245
           N     +      +++R    P   ++ +    G       K   + ++  IE+      
Sbjct: 135 NTGSSPVSPQLYLQLVRDGNKPPGESSFYSTFTGPAVYTDAKKYQKVEFKKIEEGKAEIE 194

Query: 246 HE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304
              +N ++ +   Y+AS ++           + +      Y          I PG S T 
Sbjct: 195 KSATNGYVAMVQHYFASAWLLGDGVQRELFMRKVD--TNLYSVGMITPVGEIAPGASKTV 252

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
              LFAG +   T+         P  E++ D+GW   +AKP++ L+   + L+GN+G +I
Sbjct: 253 QAQLFAGPQVEKTLEALT-----PGLELVKDYGWLTILAKPLYWLLDQLHKLLGNWGWSI 307

Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424
           +   + +K+ F+ L  K Y S A MK I PKI E+RE+ K   PQ +Q+ M+++Y+   +
Sbjct: 308 VGLVLLLKIAFYWLNAKAYASMAKMKAINPKITEMRERLKD-KPQQMQQEMMRIYREEKV 366

Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484
           NP+ GC+PI++QIPVF A+Y V+  S+EMR+AP+ GWI DL+  DP              
Sbjct: 367 NPMGGCFPIMIQIPVFIALYWVLLSSVEMRNAPWIGWIHDLSTPDPYF------------ 414

Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
                  I P++M+ S  +Q  ++P P D  QA ++ +MP++F      FPAGL++YW  
Sbjct: 415 -------ILPLLMTASSLLQTALNPAPPDPMQAKMMWFMPLIFSVMFFFFPAGLVMYWLT 467

Query: 545 SNVISIVQQAVIMKMHGAEIGL 566
           +N++SI QQ +I    G     
Sbjct: 468 NNILSIAQQWIINTRMGVPPQF 489


>gi|221135461|ref|ZP_03561764.1| 60 kDa inner membrane insertion protein [Glaciecola sp. HTCC2999]
          Length = 571

 Score =  308 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 144/595 (24%), Positives = 260/595 (43%), Gaps = 61/595 (10%)

Query: 1   MERNWNY-FVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNI-----------------Q 41
           ME   ++  +A+AL S ++   WQ  Y    +  +    +                   Q
Sbjct: 1   MESQRSFMLIALALVSFLLWQEWQTAYGPKAVTPVEQTEQKASLTEAKFVASNVPSDLAQ 60

Query: 42  TVKQPNQVDNSYAAVLIDDRAQA--------LSMSPR-VELKNPSLIGSINLKGAQFDDL 92
           T    N V N+ A V  +   +         L  S R VE+   +L  +I+L G      
Sbjct: 61  TGTNTNSVQNTAADVPANMANEPTVPVVRNQLGQSERFVEVTTDTLQVTIDLLGGDVVKA 120

Query: 93  NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI--SGKIL 150
           NL  Y +   SN     L    N    Y A+   +        P+   ++        + 
Sbjct: 121 NLIKYPITEGSNDAYSLL--RPNAAALYVAQSGLIGANGPDANPDGRPLYTSPIMQYTLN 178

Query: 151 TPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209
             +  + L +  +N +   +T      ++  ++  T+TN S D I   P  ++ +     
Sbjct: 179 NDSLSVPLSWVGSNGMRITKTFVFTRGNHAVELQQTITNGSNDTIIVQPYAQLKQTFTLP 238

Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269
             N F       A   ++   ++      +           W+ + + Y+ S ++P ++ 
Sbjct: 239 EGNMFMPTYRGAAYGTEQEQYQKYSFGDIEDESLRIATPAGWIAMIEHYFLSAWVPPQDK 298

Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329
           +     + +  G       +++  ++I+ G      + L+ G K+  T+  Y K      
Sbjct: 299 TNTIYTRAI--GTEYATIGYTSEPVSIVSGAETRLDSLLYLGPKDQDTLKQYAK-----G 351

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
             + +D+G+ +FI++ +F L+     +V N+G+AI++ T+ VK + +PL KKQY S A M
Sbjct: 352 LNLTVDYGFLWFISEWLFWLLQMIQGVVVNWGVAIIIITIIVKGIMYPLTKKQYESMAKM 411

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + + PK+ +L+E+F     Q + +AM++LYK   +NP+ GC+P+LLQ+P+F A+Y V   
Sbjct: 412 RVLGPKMTQLKERFGD-DRQKMSQAMMELYKKEKVNPMGGCFPLLLQMPIFLALYWVFLE 470

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S+E+RHA F  WI DL+  DP                     + PI+  +SM+   K+ P
Sbjct: 471 SVELRHADFVFWITDLSTKDPYF-------------------VLPILTGISMWALQKLQP 511

Query: 510 PP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
               D+ Q  I+ +MP++       FP+GL++YW  SNVI++VQ  +I       
Sbjct: 512 MTVTDEMQKKIMQFMPIMMTIFFMWFPSGLVLYWLISNVITLVQAKLIYASMEKR 566


>gi|302341714|ref|YP_003806243.1| membrane protein insertase, YidC/Oxa1 family [Desulfarculus baarsii
           DSM 2075]
 gi|301638327|gb|ADK83649.1| membrane protein insertase, YidC/Oxa1 family [Desulfarculus baarsii
           DSM 2075]
          Length = 546

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 147/564 (26%), Positives = 260/564 (46%), Gaps = 25/564 (4%)

Query: 1   ME-RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           M+       +A+ +SV +++AW  F + P  ++            Q      + AA+   
Sbjct: 1   MDSDAKRVVLALVISVAVLFAWTTFVMPPEPKQAPAPTATPAQTAQATAAAPAPAAMPAP 60

Query: 60  DRAQALSMS-PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
             A  +  +   V ++ P +  + + KG     + L+ Y          + LL  +++  
Sbjct: 61  APAPQVMPAYQDVVVETPLMRATFSTKGGALRKVVLKDYFAKPGQQGGEMVLLDLADS-E 119

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            Y   L  V    +  L       +    ++      +    ++A   + +      + +
Sbjct: 120 PYALGLALVKL--DPHLAQRPFQASAQRLEVTAAGQSLSFSAESAGVRVVKTYTFRPDSH 177

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
            F++  ++ N +  +I  +P   +  +  +   N++      +   G  SL E  + D+E
Sbjct: 178 AFQLSVSLQNKNAGRIELTPELILAEYVSKMHANSYAFTGSQVVAGG--SLEELDHGDLE 235

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG---HARYQAKFSANEIT 295
            S +         L +S  Y+     P       +Q K  + G        A   +  + 
Sbjct: 236 DSPV--VAGPIDCLTLSIPYFMGAVAPES-WPAVAQGKPSARGWADAKLMTATLVSPLLP 292

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           +  G+S+     ++ G KE   +             M +D+GWF  IAKPM   +++F++
Sbjct: 293 MDAGQSLDLKFLVYYGPKELHVLEPLGHS-----LAMAVDFGWFDVIAKPMLAGLNFFHD 347

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            V N+G+AI++ TV +KLLF+PL  K Y S   M+ +QP+I ++REK+K    Q + + +
Sbjct: 348 YVNNYGVAIIIITVLIKLLFWPLQNKSYESMKKMQKLQPQIAKIREKYKDDK-QEMNQQV 406

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           +QLYKT+ +NPL GC P+L Q+PVF A YKV+  S+E+RHAPFW WI DL+A D      
Sbjct: 407 MQLYKTYKVNPLGGCLPMLAQVPVFIAFYKVLGSSIELRHAPFWLWINDLSAPDR---LP 463

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
           +   +PF       + +  ++M  SMFI  KMSP   D  Q  ++  MPV+F     +FP
Sbjct: 464 IGFEIPFVG---DGIPVLTLLMGASMFITQKMSPATGDPTQQKMMMLMPVIFTVMFINFP 520

Query: 536 AGLIIYWSWSNVISIVQQAVIMKM 559
           +GL++YW   N++ I QQ ++ + 
Sbjct: 521 SGLVLYWFVQNLLGIGQQWLVNRR 544


>gi|298369729|ref|ZP_06981046.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sp. oral
           taxon 014 str. F0314]
 gi|298282286|gb|EFI23774.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sp. oral
           taxon 014 str. F0314]
          Length = 544

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 130/572 (22%), Positives = 233/572 (40%), Gaps = 56/572 (9%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +        ++  I++ WQ  +  P+  +  +  +  Q V    +   + A       
Sbjct: 1   MDSKRLVTFAVIAFAILFGWQKLFPAPKPAQTQHAVQQQQAVAAKAEAALTAAVP----- 55

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
                    + +   ++   I+ K      L L  Y     +N   V  L      + Y 
Sbjct: 56  ---------ITVTTDTVKAVIDEKSGDLRRLTLLKYKASGDANKDFV--LFDDGKDHTYV 104

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181
           A+ + +    N  L N           +    T ++L  +     + +        YL  
Sbjct: 105 AQAELLDAQGNNVLKNVGFTAPQKQYTLNGDKTEVRLSAEADGLKIDKVYTFTKGSYLIN 164

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF--GVQEGFIAVLGDKSLVEQKYSDIEK 239
           +   VT+     I  +   R++R   +     +      G +    +    +  +SD++ 
Sbjct: 165 VRFDVTDAGGKPINLTANYRVVRDSSKPEGQGYFTQSYVGPVVYTPEGQFEKVTFSDLDD 224

Query: 240 S-------SISNFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHARYQ 286
                   +      ++ WLG+ + ++ + +I   +           Q      G   Y 
Sbjct: 225 DFKSGKNKAEYVHKTNSGWLGMIEHHFMATWILQPKDGQTVCAAGDCQIDIKRRGDNLYS 284

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
           A  S     +  G   + +  L+AG +    +          + ++  D+G  ++ A P+
Sbjct: 285 AGVSVPMAAVAAGGKASVSMNLYAGPQTTSVLAGIAD-----KLQLAKDYGKVHWFASPL 339

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L++  + L+GN+G +I+  T+ VK + +PL    Y S A M+ + PK+  ++EK+   
Sbjct: 340 FWLLNKLHELIGNWGWSIIALTIIVKAVLYPLTNASYRSMAKMRAVAPKLQAIKEKYGDD 399

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
                Q  M Q+YK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI DL+
Sbjct: 400 RMAQQQAMM-QMYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLS 458

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
             DP                     I P+IM+ +MF Q  ++PPP D  QA ++  MP+V
Sbjct: 459 RPDPFY-------------------ILPLIMAGTMFAQTFLNPPPTDPMQAKMMKIMPMV 499

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F      FPAGL++YW  +N+++I QQ  I +
Sbjct: 500 FSVMFFFFPAGLVLYWVVNNLLTIAQQWYINR 531


>gi|325519717|gb|EGC99037.1| membrane protein insertase [Burkholderia sp. TJI49]
          Length = 553

 Score =  307 bits (785), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 145/576 (25%), Positives = 241/576 (41%), Gaps = 45/576 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+        I     ++    WQ  +  P +   +  +         +    +  A  +
Sbjct: 1   MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGTGATTTAGEV 60

Query: 59  DDRAQALSMSP--------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
              A   + +          V+       G I+ +G     L L+        +  +   
Sbjct: 61  PAAAAGTAPATTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPD--LYIT 118

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNIL 167
           L      + Y A    +   +     +  T  +     +      +KL F+        +
Sbjct: 119 LFDHTAGHTYLARSGLLG-GDFPNHNDVYTQVSTGPTSLTGDQNTLKLSFESPVKGGVKV 177

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGD 226
            +        Y+  +   + N     +  +    ++R      T  F     G       
Sbjct: 178 VKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDA 237

Query: 227 KSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           K   +  +SD++K+         N W+ +   Y+AS +IP +               + Y
Sbjct: 238 KHFQKINFSDLDKNKADYVTSADNGWVAMVQHYFASAWIPQQG--VKRDIYAEKIDPSLY 295

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
           +         I PG+S      LFAG +E   +         P  E++ D+GW   IAKP
Sbjct: 296 RVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKP 350

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+   + LVGN+G AI+L TV +K +FFPL+   Y S A MK I P++  LRE+F +
Sbjct: 351 LFWLLEKIHGLVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-K 409

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
           S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL
Sbjct: 410 SDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDL 469

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525
           +  DP                     I P++M++SMF+Q  ++P P D  QA ++ +MP+
Sbjct: 470 SQRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPI 510

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 511 AFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 546


>gi|325922758|ref|ZP_08184492.1| protein translocase subunit yidC [Xanthomonas gardneri ATCC 19865]
 gi|325546754|gb|EGD17874.1| protein translocase subunit yidC [Xanthomonas gardneri ATCC 19865]
          Length = 573

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 123/594 (20%), Positives = 233/594 (39%), Gaps = 60/594 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M +   + +   L V  +  W  +    +           Q+V     +D +     +  
Sbjct: 1   MNQTRVFLIFAWLMVAALL-WMEW-GKDKTAANAPAVATTQSVPAARDLDAAATPANVPA 58

Query: 61  RAQALSMS---------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99
                                        P V L +  L   ++  G    D  L  +  
Sbjct: 59  AQAIPQAGVPGTVSATSTTAAPPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELLQFPQ 116

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPI 156
                +P+  L    +  + Y A   + S  + +            +         +  +
Sbjct: 117 TKDGTAPVSLL--TEDAAHPYNATSGWASEHSPVPGVGGFRAEQPGAAFELARGQNSLVV 174

Query: 157 KLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
             V+   N +   RT +L    Y   I D V N S          ++ R     +     
Sbjct: 175 PFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMTN 234

Query: 216 V----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
                  G       +    + + D       N   +  W+ +   ++ + +IP K+   
Sbjct: 235 PDSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ-- 292

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            +    L+    R  A+      T+ PG++ +T   L+ G K    +   E    + R  
Sbjct: 293 -ASLYVLNQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVS-LIAKEDVKGLDRVV 350

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
               +     I + +F ++S+ ++ + N+G AI+   V ++L  +PL+  QY S A M+ 
Sbjct: 351 DYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRR 410

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
            QP++ +L+E++     +  Q+A ++L+K   INP+ GC P+L+Q+P+FFA+Y V+  S+
Sbjct: 411 FQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESV 469

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+R AP+ GWI+DL A DP                     I P++    M+   K++P P
Sbjct: 470 ELRQAPWLGWIQDLTARDPYF-------------------ILPVLNIAIMWATQKLTPTP 510

Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
             D  QA ++ +MP+VF   ++  PAGL++YW  +  + ++ Q  +++ HG + 
Sbjct: 511 GMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 564


>gi|161526323|ref|YP_001581335.1| putative inner membrane protein translocase component YidC
           [Burkholderia multivorans ATCC 17616]
 gi|189348962|ref|YP_001944590.1| putative inner membrane protein translocase component YidC
           [Burkholderia multivorans ATCC 17616]
 gi|254772760|sp|A9ACA0|OXAA_BURM1 RecName: Full=Inner membrane protein oxaA
 gi|160343752|gb|ABX16838.1| 60 kDa inner membrane insertion protein [Burkholderia multivorans
           ATCC 17616]
 gi|189332984|dbj|BAG42054.1| preprotein translocase YidC subunit [Burkholderia multivorans ATCC
           17616]
          Length = 553

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 142/576 (24%), Positives = 239/576 (41%), Gaps = 45/576 (7%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+        I     ++    WQ  +  P +   +  +         +    +  A  +
Sbjct: 1   MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGAGATTTAGNV 60

Query: 59  DDRAQALSMSP--------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
              A   + +          V+       G I+ +G     L L+          P + +
Sbjct: 61  PAPAAGTAPATTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLYI 117

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNIL 167
               +T    +     +   +     +  T  N     +      +KL F+        +
Sbjct: 118 TLFDHTAGHTYLARTGLLGGDFPNHNDVYTQVNAGPTSLSGDQNTLKLSFESPVKGGVKV 177

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGD 226
            +        Y+  +   + N     +  +    ++R      T  F     G       
Sbjct: 178 VKTYTFTRGSYVIGVDTKIDNVGTTPVTPTLYMELVRDNTAVETPMFSHTFLGPAVYTDA 237

Query: 227 KSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           K   +  +SD++K+         N W+ +   Y+AS +IP                 + Y
Sbjct: 238 KHFQKINFSDLDKNKADYVTSADNGWVAMVQHYFASAWIPQHG--VKRDIYAEKIDPSLY 295

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
           +         I PG+S      LFAG +E   +         P  E++ D+GW   IAKP
Sbjct: 296 RVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKP 350

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+   ++ VGN+G AI+L T+ +K +FFPL+   Y S A MK I P++  LRE+FK 
Sbjct: 351 LFWLLEKIHSYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKN 410

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
             PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL
Sbjct: 411 -DPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDL 469

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525
           +  DP                     I P++M++SM++Q  ++P P D  QA ++ +MP+
Sbjct: 470 SQRDPYF-------------------ILPVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPI 510

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 511 AFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 546


>gi|167736503|ref|ZP_02409277.1| putative inner membrane protein translocase component YidC
           [Burkholderia pseudomallei 14]
          Length = 496

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 141/501 (28%), Positives = 220/501 (43%), Gaps = 42/501 (8%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNAYFAELDYV 127
             V        G I+ +G     L L           P +++ L      + Y A    +
Sbjct: 21  QLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPDLSVTLFDHTANHTYLARTGLL 77

Query: 128 STANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISLDEHYLFKI 182
                 + PN N V+  ++G          L             + +        Y+  +
Sbjct: 78  ----GGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGV 133

Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSS 241
              + N     +  S    ++R      T  F     G       K   +  + DI+K+ 
Sbjct: 134 DTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNK 193

Query: 242 ISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
                   N W+ +   Y+AS +IP                   Y+         I PG+
Sbjct: 194 ADYVTSADNGWIAMVQHYFASAWIPQSGA--KRDIYVEKIDPTLYRVGVKQPVAAIAPGQ 251

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
           S   +  LFAG +E   +         P  E++ D+GW   IAKP+F L+   +  VGN+
Sbjct: 252 SADVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNW 306

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G AI+L T+ +K +FFPL+   Y S A MK I P++  LRE+F +S PQ +  A+++LYK
Sbjct: 307 GWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMNAALMELYK 365

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
           T  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+  DP          
Sbjct: 366 TEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYF-------- 417

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
                      I P++M++SMF+Q K++P P D  QA ++ +MP+ F      FPAGL++
Sbjct: 418 -----------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVL 466

Query: 541 YWSWSNVISIVQQAVIMKMHG 561
           Y+  +NV+SI QQ  I +  G
Sbjct: 467 YYVVNNVLSIAQQYYITRTLG 487


>gi|167908935|ref|ZP_02496026.1| putative inner membrane protein translocase component YidC
           [Burkholderia pseudomallei 112]
          Length = 486

 Score =  306 bits (782), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 141/499 (28%), Positives = 220/499 (44%), Gaps = 42/499 (8%)

Query: 71  VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNAYFAELDYVST 129
           V        G I+ +G     L L           P +++ L      + Y A    +  
Sbjct: 13  VRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPDLSVTLFDHTANHTYLARTGLL-- 67

Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISLDEHYLFKIVD 184
               + PN N V+  ++G          L             + +        Y+  +  
Sbjct: 68  --GGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDT 125

Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243
            + N     +  S    ++R      T  F     G       K   +  + DI+K+   
Sbjct: 126 KIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKAD 185

Query: 244 NFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302
                 N W+ +   Y+AS +IP                   Y+         I PG+S 
Sbjct: 186 YVTSADNGWIAMVQHYFASAWIPQSGA--KRDIYVEKIDPTLYRVGVKQPVAAIAPGQSA 243

Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362
             +  LFAG +E   +         P  E++ D+GW   IAKP+F L+   +  VGN+G 
Sbjct: 244 DVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGW 298

Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422
           AI+L T+ +K +FFPL+   Y S A MK I P++  LRE+F +S PQ +  A+++LYKT 
Sbjct: 299 AIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMNAALMELYKTE 357

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
            +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+  DP            
Sbjct: 358 KVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYF---------- 407

Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
                    I P++M++SMF+Q K++P P D  QA ++ +MP+ F      FPAGL++Y+
Sbjct: 408 ---------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYY 458

Query: 543 SWSNVISIVQQAVIMKMHG 561
             +NV+SI QQ  I +  G
Sbjct: 459 VVNNVLSIAQQYYITRTLG 477


>gi|167822122|ref|ZP_02453593.1| putative inner membrane protein translocase component YidC
           [Burkholderia pseudomallei 9]
          Length = 492

 Score =  306 bits (782), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 141/499 (28%), Positives = 220/499 (44%), Gaps = 42/499 (8%)

Query: 71  VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNAYFAELDYVST 129
           V        G I+ +G     L L           P +++ L      + Y A    +  
Sbjct: 19  VRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPDLSVTLFDHTANHTYLARTGLL-- 73

Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISLDEHYLFKIVD 184
               + PN N V+  ++G          L             + +        Y+  +  
Sbjct: 74  --GGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDT 131

Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243
            + N     +  S    ++R      T  F     G       K   +  + DI+K+   
Sbjct: 132 KIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKAD 191

Query: 244 NFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302
                 N W+ +   Y+AS +IP                   Y+         I PG+S 
Sbjct: 192 YVTSADNGWIAMVQHYFASAWIPQSGA--KRDIYVEKIDPTLYRVGVKQPVAAIAPGQSA 249

Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362
             +  LFAG +E   +         P  E++ D+GW   IAKP+F L+   +  VGN+G 
Sbjct: 250 DVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGW 304

Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422
           AI+L T+ +K +FFPL+   Y S A MK I P++  LRE+F +S PQ +  A+++LYKT 
Sbjct: 305 AIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMNAALMELYKTE 363

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
            +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+  DP            
Sbjct: 364 KVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYF---------- 413

Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
                    I P++M++SMF+Q K++P P D  QA ++ +MP+ F      FPAGL++Y+
Sbjct: 414 ---------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYY 464

Query: 543 SWSNVISIVQQAVIMKMHG 561
             +NV+SI QQ  I +  G
Sbjct: 465 VVNNVLSIAQQYYITRTLG 483


>gi|118594210|ref|ZP_01551557.1| preprotein translocase subunit yidC [Methylophilales bacterium
           HTCC2181]
 gi|118439988|gb|EAV46615.1| preprotein translocase subunit yidC [Methylophilales bacterium
           HTCC2181]
          Length = 546

 Score =  306 bits (782), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 146/562 (25%), Positives = 251/562 (44%), Gaps = 24/562 (4%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
                  + +  S  ++  W ++       E     + I     P+        +   + 
Sbjct: 1   METKRLILFVVFSFSLLLLWDSWQKEQTPIETVGVTEKISDSSIPSSSAQLTNNMPASNL 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
              L+ +P + +       SI+  G     L L  +            ++S +     Y 
Sbjct: 61  GFQLAQTPYITVTTDLYNISISNVGGDIRSLELLKHK---DGEGAPYLMMSDNANPLLYV 117

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181
           A+   +    ++            S ++      + LVF+N+   + +        Y+ +
Sbjct: 118 AQTGLL--GGDLPSHKDIYSAMRASYQMNDNELVVPLVFENSAVKVTKTYRFTKNSYVIQ 175

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
           +  ++ N S++ I+ S   + +        +         A   +K    +   D     
Sbjct: 176 VTYSLLNKSLNTIKSSVYLQFIHDGTTHQGSAMMPSFTGTAYFNNKDKFTKLAFDDVDKK 235

Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301
             +   S+ W+GI  +Y+A  +I   ETS     K ++D    Y +   A    I PG +
Sbjct: 236 PFSLVTSDGWIGIIQRYFAGAWILPSETSRELYSKKVADN--IYASGTLAFLGEIDPGST 293

Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361
              T+ LF G +    +    +          +D+GW  FIA P+F ++S     V N+G
Sbjct: 294 KLFTSELFVGPQSKDDLAAAAE-----GLSYAVDYGWLTFIASPLFSVLSGIQKAVINWG 348

Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421
           +AI+L T+ +KLLF+PL+   Y S A M+ + P++  ++EKF     Q +Q+AM++LYKT
Sbjct: 349 VAIILLTILIKLLFYPLSAASYRSMAQMREVAPRLQSMKEKFGDDK-QKMQQAMMELYKT 407

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
             INPL GC PIL+QIPVF A+Y V+  S+E+R AP + +I DL+  D            
Sbjct: 408 EKINPLGGCLPILVQIPVFIALYWVLLGSVELRGAP-FLYISDLSVPDSL---------- 456

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541
           F    F+ +G  P++M+ SMF+QMK++P P D  QA ++  MP++F      FPAGL++Y
Sbjct: 457 FGTLWFVPLGPLPLLMAASMFLQMKLNPKPTDPMQARLMMMMPIIFSIFFFFFPAGLVLY 516

Query: 542 WSWSNVISIVQQAVIMKMHGAE 563
           W  +N++SI QQ  +     AE
Sbjct: 517 WLVNNILSIGQQWYVNNKIHAE 538


>gi|329118137|ref|ZP_08246849.1| YidC/Oxa1 family membrane protein insertase [Neisseria
           bacilliformis ATCC BAA-1200]
 gi|327465797|gb|EGF12070.1| YidC/Oxa1 family membrane protein insertase [Neisseria
           bacilliformis ATCC BAA-1200]
          Length = 544

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 133/574 (23%), Positives = 234/574 (40%), Gaps = 58/574 (10%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
                  +   +S +I++ W   +  P+  +   +++  Q         N          
Sbjct: 1   MNAKRTTLFFIVSALILFGWGWLFPAPQPVQNPAQQQAAQPAAAVQAALNPTVP------ 54

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
                    + +   ++   I+        L L  Y+       P    L  +N    Y 
Sbjct: 55  ---------ITVATDTVSAVIDEASGDLRGLTLLKYNSADDEGKPFA--LFENNQNGVYI 103

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLF 180
           A+ D +           +         +      ++L    A+ +   +T +     YL 
Sbjct: 104 AQSDLIDETGRSLTQGLSFKSAKKQYALENGKAQVRLTATTASGLEIAKTYTFTQGSYLI 163

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDIE 238
            +   V N S   ++ +   R++R     A   + +    G +    +    +  +SD++
Sbjct: 164 DVRFDVANRSGKPLKAAAAYRVVRDSKTPAGQGYFMSSYTGPVLYTPEGKFQKVSFSDLD 223

Query: 239 KS-------SISNFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHARY 285
                    +       + W+GIS  Y+ S +I   +           +          Y
Sbjct: 224 DDFQKGRDQAEYERQTQSGWVGISQHYFFSAWILQPKDGASICAAAGCRIDIKRRDGGLY 283

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
            A  SA E  +  G S +    L+AG +    +            E++ D+G  ++ A  
Sbjct: 284 TAGVSAAEPELPAGASQSYAAKLYAGPQTTAELGKIAD-----HLELVKDYGRVHWPATA 338

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F LM   + L GN+G AI+L TV VK++ +PL    Y S A M+ + PK++ L+ K   
Sbjct: 339 LFWLMDKLHGLTGNWGWAIVLLTVIVKIILYPLNNASYKSMAKMRAVAPKLEALK-KQYG 397

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
                +Q+AM+Q+YK   INPL GC P+LLQIP+F  +Y  I  S+E+R AP+ GWI DL
Sbjct: 398 DDRMAMQQAMMQMYKDEKINPLGGCLPMLLQIPIFIGLYWAIFSSVELRQAPWLGWITDL 457

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525
           +  DP                     I P++M+ +M  Q  ++PPP+D  QA ++  MP+
Sbjct: 458 SRHDPWF-------------------ILPVLMTATMMFQTTLNPPPSDPMQAKMMKIMPL 498

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           VF      FPAGL++Y+  +N+++I QQ  + + 
Sbjct: 499 VFSVMFFFFPAGLVLYYVVNNILTIAQQMHVNRS 532


>gi|158520119|ref|YP_001527989.1| 60 kDa inner membrane insertion protein [Desulfococcus oleovorans
           Hxd3]
 gi|158508945|gb|ABW65912.1| 60 kDa inner membrane insertion protein [Desulfococcus oleovorans
           Hxd3]
          Length = 559

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 147/520 (28%), Positives = 240/520 (46%), Gaps = 22/520 (4%)

Query: 41  QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
           +            A V  +  A        V ++      ++N  GA   D  L+ Y   
Sbjct: 61  ENAPPEQVTPADSALVPTEAPAAP------VVVETGLYTVTLNGNGAHISDFVLKNYRET 114

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
               SP   LLS +N + +    L+  + A     P S  V +        P + +    
Sbjct: 115 NDPASPAKRLLSDNNPQGSLRVNLEGDTLAGMANGPYSADVADGPVVVSDQPRSVVFTRQ 174

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
                ++ +R     + Y+  +  T+ N S   +  +    + R+     +         
Sbjct: 175 FPGGRVVEKRYTFTPDSYMIDLAVTLKNGSETPLSGNLAVTLARYFTDDGSRFVFEGPSA 234

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
           +       L E K  DI+K +      S +W+ I ++Y+ S  IP   T    +     +
Sbjct: 235 LVGHD---LEEIKLGDIQKKASLT--GSLAWISIQNRYFMSALIPETPTEAAMRLSRTPE 289

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
                 A + A   T+    + T    +F G K    +            +  +++G+F 
Sbjct: 290 Q--VVTATYLAPARTVGANSTETYRFSVFMGPKSVQILGRAGHA-----LDRAVNFGFFD 342

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           FIA+P   LM++ Y  + N+GIAI++ T+  KL+F+PL  K Y S A MK + P + E+R
Sbjct: 343 FIARPCLWLMNFLYRYIPNYGIAIIIITLLFKLVFWPLGNKSYKSMAEMKRLAPLMAEIR 402

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           EK+K    + + + ++ LY+T+ INPL GC PIL+QIPVFFA Y+++  ++E+RHAPF+G
Sbjct: 403 EKYKD-DRKKMNEEVMNLYRTYKINPLGGCLPILVQIPVFFAFYRMLYQAIELRHAPFFG 461

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           WI DL+A D   +F     LP   P  + + +  I+M  +M IQ K+ PP  D  QA I+
Sbjct: 462 WINDLSAPD--RLFNFDVSLPLIAPP-VGIPVLTIVMGATMIIQQKLQPPMGDPTQAKIM 518

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
             MP+ F F   +FP+GL++YW  +N ISI QQ  I + +
Sbjct: 519 MLMPIFFTFIFINFPSGLVLYWLVNNTISIFQQYYITRKN 558


>gi|198282181|ref|YP_002218502.1| 60 kDa inner membrane insertion protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218665291|ref|YP_002424546.1| inner membrane protein, 60 kDa [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198246702|gb|ACH82295.1| 60 kDa inner membrane insertion protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218517504|gb|ACK78090.1| inner membrane protein, 60 kDa [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 528

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 155/566 (27%), Positives = 252/566 (44%), Gaps = 42/566 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+      +A+AL+V++   +Q +     P+        +++               V  
Sbjct: 1   MDNQK-TILAVALAVVVFLLFQAWQEQNAPKPAAGPAVSRSVTAPGATATSPAPVDVVPA 59

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                  +    V  +     G I+L G    +L LR Y   V   +P   L       +
Sbjct: 60  SAGGLPPATGAAVSFQTQVFTGRISLNGGDIQNLGLRHYPQAVDDTAPYPLL-------D 112

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
              A L    +        + T          T   PI L  K     + +      + Y
Sbjct: 113 GAPARLTIQQSGFVSSDGQTLTARFAAPAGQTTAGQPIVLTGKAGPLTVEKTWTFQPDSY 172

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
           + +   T+TN+       S   +I+R+          +  G + +    +  E  +SDI 
Sbjct: 173 VAEEHVTITNSGSAPWNGSYFDQILRNDRTETHMFMSIFTGAVLMH-QGNFSEVSFSDIH 231

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
              +        W G+ D Y+ +  +PS         +        Y A  S    T+ P
Sbjct: 232 DHPVLK--SGPGWAGMMDHYFLTAILPSAHAQVQVYAR---PSGTNYVAGVSTPLPTLAP 286

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
           G+S T T  LF G K   T+    +       E  +D+GWF  IA+PM +++++F+ LVG
Sbjct: 287 GQSTTITQQLFLGPKRQQTLAAMGR-----GLEQTVDYGWFAIIAEPMHVVLTWFHGLVG 341

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G+AI+L  + VK +FF  +   Y S ANM+ +QPK+++L+++      Q L  AM++L
Sbjct: 342 NWGLAIILLVIVVKSIFFYPSAISYRSMANMRKLQPKLEKLKQEVGD-DRQKLGAAMMEL 400

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           Y++  +NP+AGC PI+LQ+P F A+Y V+  S+ +R APF  WI DLA  DP        
Sbjct: 401 YRSEKVNPMAGCLPIILQMPFFIALYWVLVESVSLRQAPFILWIHDLAIPDPYF------ 454

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
                        I P++M +SMF Q +++P P D  Q  I++ +PVVF    S FPAGL
Sbjct: 455 -------------ILPLLMGISMFFQQRLNPAPVDPMQKRIMSALPVVFAVFFSFFPAGL 501

Query: 539 IIYWSWSNVISIVQQAVIMK-MHGAE 563
           ++YW  +NV+SI QQ +I + +  A+
Sbjct: 502 VLYWLTNNVVSIGQQYLITRHIMKAK 527


>gi|118603000|ref|YP_904215.1| protein translocase subunit yidC [Candidatus Ruthia magnifica str.
           Cm (Calyptogena magnifica)]
 gi|166977411|sp|A1AXT7|OXAA_RUTMC RecName: Full=Inner membrane protein oxaA
 gi|118567939|gb|ABL02744.1| protein translocase subunit yidC [Candidatus Ruthia magnifica str.
           Cm (Calyptogena magnifica)]
          Length = 541

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 131/573 (22%), Positives = 245/573 (42%), Gaps = 49/573 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF------------YVYPRIEEMNNERKNIQTVKQPNQ 48
           M    N+ + +A+ + +   W  +                +I++ +    ++        
Sbjct: 1   MNNQKNFLI-VAIFLSVFLLWDKWGVTHVVGANGNLISQTKIKDASTINNSLTNKNLNAS 59

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
                 A L        + +P   +    L   I+ KG    +  L  Y ++++S     
Sbjct: 60  SIIHRNAELDLPNTITKNQAPFTTVVTDLLTLEISHKGGTIQNAWLNDYPIEINSEQKFQ 119

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
            L   SN  +  F     +         +S         ++   +  +   +K+ N I  
Sbjct: 120 LL---SNKADEIFQAQSGLLPQGQTPTHHSIFSSKNSHYQMDGNSLVVPFTWKSENGIKV 176

Query: 169 ERTISLDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227
            +    +++     I   +TN + + +  +   +++R+    +        G        
Sbjct: 177 IKRYHFNKNSYVIGIDYQITNTTNNTLNITSYTQLVRNALDQSNMIIPTYTGGARFDDQD 236

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + ++ D              W+ + + Y+    IP          K ++     Y  
Sbjct: 237 VYEKIEFEDFNDQP--KTTSKGGWIAMIEHYFFVAAIPDVNQIHTYSSKIINGE---YLL 291

Query: 288 KFSANEITILPGKSITT-TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
                E+ I PG  +T  ++ L+ G KE   I++       P  +  +D+G  + IAKP+
Sbjct: 292 TVVNPELVIAPGAIVTLPSSSLYIGPKEQKQINNVA-----PGLDKTVDYGVLFIIAKPL 346

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
             L+++ Y+++ ++G +I+  T+ +KL F+ L++K Y S A M+ + P++ +L+E +   
Sbjct: 347 SELLNWIYSIIHSWGYSIITLTLLIKLAFYKLSEKSYRSMAGMRQLAPRLTKLKETYGDD 406

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q L +  ++LYK   INP +GC PIL+QIPVF ++Y V+   +E+R AP + ++ DL+
Sbjct: 407 K-QKLGQKTMELYKKEKINPASGCLPILVQIPVFISLYWVLLEMVELRQAP-FWYLTDLS 464

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
           A DP                     I P+IM +SMF Q K++PPP D  QA I+  +P V
Sbjct: 465 AQDPYY-------------------ILPLIMGVSMFAQQKLNPPPPDPMQAKIMMALPFV 505

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           F      FP+GL++YW  +N++SI QQ VI K 
Sbjct: 506 FTIFFLWFPSGLVLYWVVNNILSITQQWVINKR 538


>gi|85858985|ref|YP_461187.1| 60 kDa inner membrane protein [Syntrophus aciditrophicus SB]
 gi|123516274|sp|Q2LSF9|OXAA_SYNAS RecName: Full=Inner membrane protein oxaA
 gi|85722076|gb|ABC77019.1| 60 kDa inner membrane protein [Syntrophus aciditrophicus SB]
          Length = 544

 Score =  303 bits (776), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 133/530 (25%), Positives = 219/530 (41%), Gaps = 30/530 (5%)

Query: 30  IEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89
           +              +P+    +                  + +  P        KG   
Sbjct: 42  VVNPAAPVSPQTPADEPSSGSAANPETAAALPVDGTEKEQEITVDTPLYQAVFTTKGGAL 101

Query: 90  DDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI 149
               L+ Y   ++ NS  + L+                S+ +             I  K 
Sbjct: 102 KSFALKNYRETLAVNSKPIELVDVKEAMPYPLGISFPASSVDVSPASFFKADVPAIDLKS 161

Query: 150 LTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208
            + +  +  V      I  E+  + +   Y   +     N S   +         ++   
Sbjct: 162 TSESRRLTFVQTWPGKIKIEKIYTFNPGKYAIDLEIRTYNLSEVPLSQEIALFWNQYVDP 221

Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268
           +A        G ++ +      E+        S+       SW G   KY+ +  IP   
Sbjct: 222 SAKEDSYGHTGPVSYVAKDVEREKVTKMETPKSLG---PDVSWGGFESKYFIAAMIPQNP 278

Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328
           +          D            +  I PG++   T  LF G K++  +    K   + 
Sbjct: 279 SLTSLSLS--KDSSNMVSTSLKGPKNIIPPGQAGFFTYKLFLGPKDYNIL----KAQGVG 332

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
               +    W  ++A P+ + + + YN V N+GIAI++ T+ +K+LF+PL  K Y S   
Sbjct: 333 LENAIDFGSWLKWLAMPLLLSLKFLYNYVHNYGIAIIILTILIKILFWPLGNKSYKSMKE 392

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QPK+ ELREK+K      L +  + LYK + +NP+ GC P+++QIPVFF +YK + 
Sbjct: 393 MQKLQPKMLELREKYKNDKA-RLSQETMALYKAYKVNPMGGCLPMIIQIPVFFGLYKALL 451

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
            ++E+RH+PF+ WI+DL+A DP                     I PIIM  +MF+Q KM+
Sbjct: 452 YAIELRHSPFFLWIQDLSAKDPYY-------------------ITPIIMGATMFLQQKMT 492

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           P   D  QA I+ WMPV+F F   +FP+GL+IYW ++N++SI QQ  I K
Sbjct: 493 PVSGDPTQAKIMLWMPVIFTFMFLNFPSGLVIYWLFNNILSIGQQYYINK 542


>gi|221201819|ref|ZP_03574856.1| inner membrane protein OxaA [Burkholderia multivorans CGD2M]
 gi|221207675|ref|ZP_03580683.1| inner membrane protein OxaA [Burkholderia multivorans CGD2]
 gi|221172521|gb|EEE04960.1| inner membrane protein OxaA [Burkholderia multivorans CGD2]
 gi|221178239|gb|EEE10649.1| inner membrane protein OxaA [Burkholderia multivorans CGD2M]
          Length = 543

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 135/494 (27%), Positives = 219/494 (44%), Gaps = 32/494 (6%)

Query: 71  VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130
           V+       G I+ +G     L L+        +  +   L      + Y A    +   
Sbjct: 72  VKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPD--LYITLFDHTAGHTYLARTGLLGDF 129

Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNN 189
            N     +       S      T  +         +   +T +     Y+  +   + N 
Sbjct: 130 PNHNDVYTQVNAGPTSLSGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDNV 189

Query: 190 SIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE- 247
               +  +    ++R      T  F     G       K   +  +SD++K+        
Sbjct: 190 GTTPVTPTLYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKINFSDLDKNKADYVTSA 249

Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307
            N W+ +   Y+AS +IP +               + Y+         I PG+S+     
Sbjct: 250 DNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPSLYRVGVKQPVAAIAPGQSVDVQAR 307

Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367
           LFAG +E   +         P  E++ D+GW   IAKP+F L+   ++ VGN+G AI+L 
Sbjct: 308 LFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGWAIVLL 362

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427
           T+ +K +FFPL+   Y S A MK I P++  LRE+FK   PQ +  A+++LYKT  +NP 
Sbjct: 363 TLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKN-DPQKMNAALMELYKTEKVNPF 421

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487
            GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+  DP                 
Sbjct: 422 GGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYF--------------- 466

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
               I P++M++SM++Q  ++P P D  QA ++ +MP+ F      FPAGL++Y+  +NV
Sbjct: 467 ----ILPVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNV 522

Query: 548 ISIVQQAVIMKMHG 561
           +SI QQ  I +  G
Sbjct: 523 LSIAQQYYITRKLG 536


>gi|78067989|ref|YP_370758.1| putative inner membrane protein translocase component YidC
           [Burkholderia sp. 383]
 gi|123567331|sp|Q39BQ2|OXAA_BURS3 RecName: Full=Inner membrane protein oxaA
 gi|77968734|gb|ABB10114.1| protein translocase subunit yidC [Burkholderia sp. 383]
          Length = 555

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 139/578 (24%), Positives = 234/578 (40%), Gaps = 47/578 (8%)

Query: 1   MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51
           M+        I     ++    WQ        F+                          
Sbjct: 1   MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAAGGASGTGATTTTAG 60

Query: 52  SYAAVLIDDRAQALS---MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
              A          +    +  V+       G I+ +G     L L+          P +
Sbjct: 61  EVPAAAAGAAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDL 117

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANN 165
            +    +T    +     +   +     +  T  N  +  +      +KL F+       
Sbjct: 118 YITLFDHTAGHTYLARSGLLGGDFPNHNDVYTQLNPGTTSLTGDQNALKLSFESPVKGGV 177

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVL 224
            + +        Y+  +   + N     +  +    ++R      T  F     G     
Sbjct: 178 KVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYT 237

Query: 225 GDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
             K   +  +SD++K+         N W+ +   Y+AS +IP +                
Sbjct: 238 DAKHFQKINFSDLDKNKADYVTSADNGWVAMVQHYFASAWIPQQG--VKRDIYAEKIDPT 295

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            Y+         I PG+S      LFAG +E   +         P  E++ D+GW   IA
Sbjct: 296 LYRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIA 350

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP+F L+   ++ +GN+G +I+L T+ +K +FFPL+   Y S A MK I P++  LRE+F
Sbjct: 351 KPLFWLLEKIHSYIGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF 410

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
            +S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  S+EMR AP+  WI 
Sbjct: 411 -KSDPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIH 469

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
           DL+  DP                     I P++M++SM++Q  ++P P D  QA ++ +M
Sbjct: 470 DLSQRDPFF-------------------ILPVLMAVSMYVQTSLNPTPPDPVQAKMMKFM 510

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           P+ F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 511 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 548


>gi|328675234|gb|AEB27909.1| OxaI/YidC membrane insertion protein [Francisella cf. novicida
           3523]
          Length = 551

 Score =  302 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 141/574 (24%), Positives = 251/574 (43%), Gaps = 54/574 (9%)

Query: 7   YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
             V IA+  I +   W+  +     ++  +E +N       +   N+         + A 
Sbjct: 10  LLVTIAIMFISLMGKWEQTFPADNTKQQTSETQNNSHYDNADATTNTNITAADAKSSLAK 69

Query: 66  SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
             +         + +         ++L        +L+ Y + +   +P+  L   S ++
Sbjct: 70  ETNFSKYDNAKSITINTGVFKDLKVSLLDGAIISASLKDYTISLDDKTPMSLLTDKSGSE 129

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
             Y A+   V     I +      +     K       + L        +       D  
Sbjct: 130 --YIAKSTIVVNKQPISIN-----FESQGIKTENGKQILTLTANTDGLQIIRTYTFDDTK 182

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231
           Y   +  ++ N +   +         R       +            G        S  +
Sbjct: 183 YNITVSQSIKNTTSAPVNLIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242

Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
           + + DI K++      +     W+     Y+ S +IP      +++  Y +     ++A 
Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGDVFEAG 299

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                +TI P +S   ++ L+ G      +         P  E  +D+G   F ++ +F 
Sbjct: 300 AFTG-VTIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           +M++ ++LVGN+G+AI+L T  +KL+F+PL+ K Y S A M+ +QP+I  L+E +K    
Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q L K M++LYK   +NPL+GC P+L+QIP+F ++Y V+  S+E+R APF  WI DL+  
Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP                     + P++M LSMF+Q K+SP PAD  QA ++ ++PV+F 
Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           F  +SFP+GL++YW  +N+ISI QQ +I + + A
Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547


>gi|285019933|ref|YP_003377644.1| inner-membrane protein oxaa [Xanthomonas albilineans GPE PC73]
 gi|283475151|emb|CBA17650.1| probable inner-membrane protein oxaa [Xanthomonas albilineans]
          Length = 575

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 124/587 (21%), Positives = 236/587 (40%), Gaps = 54/587 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M +   + +   L V  +  W  +                  +   +      A +    
Sbjct: 1   MNQTRLFLIFAWLMVAALL-WMEWSKEHSPAASATSSAATTALPPASATSAGTAGMPPIP 59

Query: 61  RAQALSMSP----------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
           RA                       RV +    L  +++  G+   D +L  Y      +
Sbjct: 60  RANVPGAGSGAGTTAETAAPAAGATRVTVTTDVLRLTMD--GSSVLDADLLMYPQTQQPS 117

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVF 160
           SP V LL+  +  + Y A   ++   N+               + +      +  +  V+
Sbjct: 118 SPPVQLLT-EDALHPYNAISGWIGERNSPSPSLGGFRPEQPGKEYVLAKGQDSLEVPFVW 176

Query: 161 KNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--- 216
              + I   R  +L   HY  ++ D + N+     +     ++ R     +         
Sbjct: 177 NGPSGISIRRVYTLQPGHYAVQVRDEIVNHGSKPWQGYVFRKLSRVPTIVSRGMTNPDSF 236

Query: 217 -QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275
              G            + + D       N   S  W+ +   ++ + +IP  +       
Sbjct: 237 SFNGATWFSPQDGYQRRAFKDYLADGPLNQTISGGWIAVLQHHFFTSWIPQADQQSVYLL 296

Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
               +    +  +       ++PG   +T   L+ G K    I   +    + R      
Sbjct: 297 S---NEGPLHVIEARGPAFVVVPGGHASTEARLWVGPKLVNQIAKEQVK-GLDRVVDYSR 352

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           +     + + +F ++S+ + L+GN+G +I+   + +KLL +PL+  QY S+A ++  QP+
Sbjct: 353 FSLMALLGQGLFWILSHLHALLGNWGWSIVGLVLLLKLLLYPLSSAQYKSSAKLRKFQPR 412

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           + +L+E++     Q LQ AM++LYK   INP+ GC P+L+Q+P+FFA+Y V+  S+E+R 
Sbjct: 413 MQQLKERYGDDK-QKLQTAMMELYKKEKINPMGGCLPVLIQMPIFFALYWVLVESVELRQ 471

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514
           AP++ WI+DL A DP                     I P+I +  M +  K++P P  D 
Sbjct: 472 APWFAWIQDLTARDPYF-------------------ILPVINAAVMLLTQKLTPTPGMDP 512

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            QA ++ +MP+VF   ++  P+GL++YW  +  + ++QQ  + K HG
Sbjct: 513 AQAKMMQFMPLVFGVMMAFVPSGLVLYWVTNGSLGLLQQWWMNKRHG 559


>gi|66770623|ref|YP_245385.1| putative inner membrane protein translocase component YidC
           [Xanthomonas campestris pv. campestris str. 8004]
 gi|81303430|sp|Q4UNK8|OXAA_XANC8 RecName: Full=Inner membrane protein oxaA
 gi|66575955|gb|AAY51365.1| 60 kDa inner-membrane protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 573

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 123/592 (20%), Positives = 229/592 (38%), Gaps = 56/592 (9%)

Query: 1   MERNWNYFVAIALS--VIIVYAWQNFYVYPRIEEMNNERK-----------------NIQ 41
           M +   + +   L    ++   W               +                  + Q
Sbjct: 1   MNQTRVFLIFAWLMVAALLWMEWGKDKAPANAPTPIASQAVPAARDPDAAAPAANVPSAQ 60

Query: 42  TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
            + Q        A             +P + L +  L   ++  G    D  L  +    
Sbjct: 61  AIPQAGSPAAVPATSTTTATPATTGAAPAITLTSDVLRLKLD--GRSVLDAELLQFPQTK 118

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKL 158
               P+  L    +  + Y A   + S  + +            +         T  +  
Sbjct: 119 DGTEPVKLL--TEDAAHPYNATSGWASERSPVPGVGGFRAEQPGTTFELAKGQNTLVVPF 176

Query: 159 VFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV- 216
           V+   N +   R  +L    Y   I D V N S          ++ R     +       
Sbjct: 177 VWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNGYVFRKLSRVPTILSRGMTNPD 236

Query: 217 ---QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273
                G       +    + + D       N   +  W+ +   ++ + +IP K+    +
Sbjct: 237 SFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ---A 293

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
               L+    R  A+      T+ PG+S +T   L+ G K    +   E    + R    
Sbjct: 294 SLYVLAQDGPRDVAELRGPAFTVAPGQSASTEARLWVGPKLVSLLAK-EDVKGLDRVVDY 352

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
             +     I + +F ++S+ ++ + N+G AI+   V ++L  +PL+  QY S A M+  Q
Sbjct: 353 SRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQ 412

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P++ +L+E++     Q  Q+A ++L+K   INP+ GC P+L+Q+P+FFA+Y V+  S+E+
Sbjct: 413 PRLAQLKERYGD-DRQKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVEL 471

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512
           R AP+ GWI+DL A DP                     I P++    M+   K++P P  
Sbjct: 472 RQAPWLGWIQDLTARDPYF-------------------ILPVLNIAIMWATQKLTPTPGM 512

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           D  QA ++ +MP+VF   ++  PAGL++YW  +  + ++ Q  +++ HG + 
Sbjct: 513 DPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 564


>gi|221214579|ref|ZP_03587549.1| inner membrane protein OxaA [Burkholderia multivorans CGD1]
 gi|221165469|gb|EED97945.1| inner membrane protein OxaA [Burkholderia multivorans CGD1]
          Length = 544

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 135/496 (27%), Positives = 222/496 (44%), Gaps = 35/496 (7%)

Query: 71  VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130
           V+       G I+ +G     L L+          P + +    +T    +     +   
Sbjct: 72  VKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLYITLFDHTAGHTYLARTGLLGG 128

Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILFERTISLDEHYLFKIVDTVT 187
           +     +  T  N     +      +KL F+        + +        Y+  +   + 
Sbjct: 129 DFPNHNDVYTQVNAGPTSLSGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKID 188

Query: 188 NNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246
           N     +  +    ++R      T  F     G       K   +  +SD++K+      
Sbjct: 189 NVGTTPVTPTLYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKINFSDLDKNKADYVT 248

Query: 247 E-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305
              N W+ +   Y+AS +IP +               + Y+         I PG+S+   
Sbjct: 249 SADNGWIAMVQHYFASAWIPQQG--VKRDIYAEKIDPSLYRVGVKQPVAAIAPGQSVDVQ 306

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
             LFAG +E   +         P  E++ D+GW   IAKP+F L+   ++ VGN+G AI+
Sbjct: 307 ARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGWAIV 361

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
           L T+ +K +FFPL+   Y S A MK I P++  LRE+FK   PQ +  A+++LYKT  +N
Sbjct: 362 LLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKN-DPQKMNAALMELYKTEKVN 420

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           P  GC P+++QIPVF ++Y V+  S+EMR AP+  WI DL+  DP               
Sbjct: 421 PFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYF------------- 467

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
                 I P++M++SM++Q  ++P P D  QA ++ +MP+ F      FPAGL++Y+  +
Sbjct: 468 ------ILPVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVN 521

Query: 546 NVISIVQQAVIMKMHG 561
           NV+SI QQ  I +  G
Sbjct: 522 NVLSIAQQYYITRKLG 537


>gi|118496688|ref|YP_897738.1| membrane protein of unknown function [Francisella tularensis subsp.
           novicida U112]
 gi|194323997|ref|ZP_03057772.1| 60Kd inner membrane protein [Francisella tularensis subsp. novicida
           FTE]
 gi|166975866|sp|A0Q419|OXAA_FRATN RecName: Full=Inner membrane protein oxaA
 gi|118422594|gb|ABK88984.1| conserved membrane protein of unknown function [Francisella
           novicida U112]
 gi|194321894|gb|EDX19377.1| 60Kd inner membrane protein [Francisella tularensis subsp. novicida
           FTE]
          Length = 551

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 140/574 (24%), Positives = 248/574 (43%), Gaps = 54/574 (9%)

Query: 7   YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
             V IA+  I +   W+  +     ++  +  +N       +   N+         + A 
Sbjct: 10  LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69

Query: 66  SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
             +         + +         ++L        +L+ Y + +   +P+  L   S ++
Sbjct: 70  ETNFSKYDNAKSITINTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
             Y A+   V     I +      +     K       + L        +       D  
Sbjct: 130 --YIAKSTIVVNKQPISVN-----FEDQGIKTENGKQILTLTGSADGLQITRTYTFDDTK 182

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231
           Y   +   + N +   +         R       +            G        S  +
Sbjct: 183 YNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242

Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
           + + DI K++      +     W+     Y+ S +IP      +++  Y +     ++A 
Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGDVFEAG 299

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                 TI P +S   ++ L+ G      +         P  E  +D+G   F ++ +F 
Sbjct: 300 AFTGA-TIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           +M++ ++LVGN+G+AI+L T  +KL+F+PL+ K Y S A M+ +QP+I  L+E +K    
Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q L K M++LYK   +NPL+GC P+L+QIP+F ++Y V+  S+E+R APF  WI DL+  
Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP                     + P++M LSMF+Q K+SP PAD  QA ++ ++PV+F 
Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           F  +SFP+GL++YW  +N+ISI QQ +I + + A
Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547


>gi|56707390|ref|YP_169286.1| inner-membrane protein [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110669861|ref|YP_666418.1| inner-membrane protein [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134302668|ref|YP_001122637.1| inner-membrane protein of unknown function [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|224456465|ref|ZP_03664938.1| hypothetical protein FtultM_01268 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370910|ref|ZP_04986915.1| inner-membrane protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874228|ref|ZP_05246938.1| inner-membrane protein [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|81677123|sp|Q5NI56|OXAA_FRATT RecName: Full=Inner membrane protein oxaA
 gi|122971083|sp|Q14JK8|OXAA_FRAT1 RecName: Full=Inner membrane protein oxaA
 gi|166975867|sp|A4J015|OXAA_FRATW RecName: Full=Inner membrane protein oxaA
 gi|56603882|emb|CAG44866.1| Inner-membrane protein [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320194|emb|CAL08249.1| Inner-membrane protein [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134050445|gb|ABO47516.1| inner-membrane protein of unknown function [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|151569153|gb|EDN34807.1| inner-membrane protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254840227|gb|EET18663.1| inner-membrane protein [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158529|gb|ADA77920.1| hypothetical protein NE061598_01330 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 551

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 141/574 (24%), Positives = 249/574 (43%), Gaps = 54/574 (9%)

Query: 7   YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
             V IA+  I +   W+  +     ++  +  +N       +   N+         + A 
Sbjct: 10  LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69

Query: 66  SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
             +         + +         ++L        +L+ Y + +   +P+  L   S ++
Sbjct: 70  ETNFSKYDNAKSITINTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
             Y A+   V     I +      +     KI      + L        +       D  
Sbjct: 130 --YIAKSTIVVNKQPISVN-----FEDQGIKIENGKQILTLTGSADGLQITRTYTFDDTK 182

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231
           Y   +   + N +   +         R       +            G        S  +
Sbjct: 183 YNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242

Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
           + + DI K++      +     W+     Y+ S +IP      +++  Y +     ++A 
Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGDVFEAG 299

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                 TI P +S   ++ L+ G      +         P  E  +D+G   F ++ +F 
Sbjct: 300 AFTGA-TIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           +M++ ++LVGN+G+AI+L T  +KL+F+PL+ K Y S A M+ +QP+I  L+E +K    
Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q L K M++LYK   +NPL+GC P+L+QIP+F ++Y V+  S+E+R APF  WI DL+  
Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP                     + P++M LSMF+Q K+SP PAD  QA ++ ++PV+F 
Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           F  +SFP+GL++YW  +N+ISI QQ +I + + A
Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547


>gi|187932218|ref|YP_001892203.1| hypothetical membrane protein [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|254772786|sp|B2SE60|OXAA_FRATM RecName: Full=Inner membrane protein oxaA
 gi|187713127|gb|ACD31424.1| hypothetical membrane protein [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 551

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 141/574 (24%), Positives = 249/574 (43%), Gaps = 54/574 (9%)

Query: 7   YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
             V IA+  I +   W+  +     ++  +  +N       +   N+         + A 
Sbjct: 10  LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69

Query: 66  SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
             +         + +         ++L        +L+ Y + +   +P+  L   S ++
Sbjct: 70  ETNFSKYDNAKSITINTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
             Y A+   V     I +      +     KI      + L        +       D  
Sbjct: 130 --YIAKSTIVVNKQPISVN-----FEDQGIKIENGKQILTLTGSADGLQITRTYTFDDTK 182

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231
           Y   +   + N +   +         R       +            G        S  +
Sbjct: 183 YNISVSQNIKNTTSAPVNVIVDDSFARGFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242

Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
           + + DI K++      +     W+     Y+ S +IP      +++  Y +     ++A 
Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGDVFEAG 299

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                 TI P +S   ++ L+ G      +         P  E  +D+G   F ++ +F 
Sbjct: 300 AFTGA-TIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           +M++ ++LVGN+G+AI+L T  +KL+F+PL+ K Y S A M+ +QP+I  L+E +K    
Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q L K M++LYK   +NPL+GC P+L+QIP+F ++Y V+  S+E+R APF  WI DL+  
Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP                     + P++M LSMF+Q K+SP PAD  QA ++ ++PV+F 
Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           F  +SFP+GL++YW  +N+ISI QQ +I + + A
Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547


>gi|21233657|ref|NP_639574.1| putative inner membrane protein translocase component YidC
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|38503060|sp|Q8P338|OXAA_XANCP RecName: Full=Inner membrane protein oxaA
 gi|21115530|gb|AAM43456.1| 60kDa inner-membrane protein [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
          Length = 573

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 123/592 (20%), Positives = 229/592 (38%), Gaps = 56/592 (9%)

Query: 1   MERNWNYFVAIALS--VIIVYAWQNFYVYPRIEEMNNERK-----------------NIQ 41
           M +   + +   L    ++   W               +                  + Q
Sbjct: 1   MNQTRVFLIFAWLMVAALLWMEWGKDKAAANAPTPIASQAVPAARDPDAAAPAANVPSAQ 60

Query: 42  TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
            + Q        A             +P + L +  L   ++  G    D  L  +    
Sbjct: 61  AIPQAGSPAAVPATSTTTATPATTGAAPAITLTSDVLRLKLD--GRSVLDAELLQFPQTK 118

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKL 158
               P+  L    +  + Y A   + S  + +            +         T  +  
Sbjct: 119 DGTEPVKLL--TEDAAHPYNATSGWASERSPVPGVGGFRAEQPGTTFELAKGQNTLVVPF 176

Query: 159 VFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV- 216
           V+   N +   R  +L    Y   I D V N S          ++ R     +       
Sbjct: 177 VWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNGYVFRKLSRVPTILSRGMTNPD 236

Query: 217 ---QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273
                G       +    + + D       N   +  W+ +   ++ + +IP K+    +
Sbjct: 237 SFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ---A 293

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
               L+    R  A+      T+ PG+S +T   L+ G K    +   E    + R    
Sbjct: 294 SLYVLAQDGPRDVAELRGPAFTVAPGQSASTEARLWVGPKLVSLLAK-EDVKGLDRVVDY 352

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
             +     I + +F ++S+ ++ + N+G AI+   V ++L  +PL+  QY S A M+  Q
Sbjct: 353 SRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQ 412

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P++ +L+E++     Q  Q+A ++L+K   INP+ GC P+L+Q+P+FFA+Y V+  S+E+
Sbjct: 413 PRLAQLKERYGD-DRQKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVEL 471

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512
           R AP+ GWI+DL A DP                     I P++    M+   K++P P  
Sbjct: 472 RQAPWLGWIQDLTARDPYF-------------------ILPVLNIAIMWATQKLTPTPGM 512

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           D  QA ++ +MP+VF   ++  PAGL++YW  +  + ++ Q  +++ HG + 
Sbjct: 513 DPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 564


>gi|254372056|ref|ZP_04987549.1| hypothetical protein FTCG_01195 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569787|gb|EDN35441.1| hypothetical protein FTCG_01195 [Francisella novicida GA99-3549]
 gi|328676141|gb|AEB27011.1| OxaI/YidC membrane insertion protein [Francisella cf. novicida Fx1]
          Length = 551

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 140/574 (24%), Positives = 248/574 (43%), Gaps = 54/574 (9%)

Query: 7   YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
             V IA+  I +   W+  +     ++  +  +N       +   N+         + A 
Sbjct: 10  LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69

Query: 66  SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
             +         + +         ++L        +L+ Y + +   +P+  L   S ++
Sbjct: 70  ETNFSKYDNAKSITINTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
             Y A+   V     I +      +     K       + L        +       D  
Sbjct: 130 --YIAKSTIVVNKQPISVN-----FEDQGIKTENGKQILTLTGSADGLQITRTYTFDDTK 182

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231
           Y   +   + N +   +         R       +            G        S  +
Sbjct: 183 YNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242

Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
           + + DI K++      +     W+     Y+ S +IP      +++  Y +     ++A 
Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGNVFEAG 299

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                 TI P +S   ++ L+ G      +         P  E  +D+G   F ++ +F 
Sbjct: 300 AFTGA-TIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           +M++ ++LVGN+G+AI+L T  +KL+F+PL+ K Y S A M+ +QP+I  L+E +K    
Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q L K M++LYK   +NPL+GC P+L+QIP+F ++Y V+  S+E+R APF  WI DL+  
Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP                     + P++M LSMF+Q K+SP PAD  QA ++ ++PV+F 
Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           F  +SFP+GL++YW  +N+ISI QQ +I + + A
Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547


>gi|238021627|ref|ZP_04602053.1| hypothetical protein GCWU000324_01529 [Kingella oralis ATCC 51147]
 gi|237866241|gb|EEP67283.1| hypothetical protein GCWU000324_01529 [Kingella oralis ATCC 51147]
          Length = 568

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 134/583 (22%), Positives = 258/583 (44%), Gaps = 64/583 (10%)

Query: 1   MERN-----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55
           M++             A++++ + AWQ+F+   + ++    ++     +       +   
Sbjct: 1   MQQQNPSDFKRMLTTAAVAIVFMMAWQHFFPAAQPQQQQAAQQQQTAAQPQAAPLGATVP 60

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
                          V ++  ++  +I+ K      L L+ Y     +       L    
Sbjct: 61  ---------------VSVETDTVKATIDEKSGDLRGLTLQHYDATHDTAQSFT--LFADG 103

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL- 174
               Y A+ + V    N  L N+N      S  +      ++L     N +  ++  +  
Sbjct: 104 KPLTYVAQSNLVDANGNNILANANFQAASKSQTLNGDKLEVRLTAPAQNGVQVDKIYTFT 163

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF----------IAVL 224
              YL  +   V N S   ++     +I+R   + A   +                    
Sbjct: 164 KGSYLVNVRFEVKNTSSQAVKLGTSYQIVRDNSKPAGEGWFTSSYVGPVLYTPDADAFQK 223

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI--PSKETSFHS----QFKYL 278
              + +++ +   + ++      S  ++G+   Y+AS +I  P    +  +         
Sbjct: 224 VQFATLDKDFEAGKDTAEYQRKASGGYVGMIQHYFASAWIMQPENGENLCTGGSCTIGIK 283

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
                 Y A  +   + I  G S T    L+AG +    +         P+FE+  D+G 
Sbjct: 284 RLPSNLYSAGVNTAAVDIPAGGSKTFAANLYAGPQVTSILKTIA-----PKFELTKDYGR 338

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +  A P+F L+++ + ++GN+G AI++ T+ VK + FPL +K Y S A M++IQPK++ 
Sbjct: 339 VHIFASPLFALLNWLHGIIGNWGWAIIVLTLIVKAILFPLNQKAYKSMAKMRSIQPKMEA 398

Query: 399 LREKFKQSPPQV-LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           L++K+     ++ +Q+ +++LY+   INPL GC P+L+Q+P+F  +Y +I +S+E+R AP
Sbjct: 399 LKKKYPNPEDRMAMQQELMKLYRDEKINPLGGCLPMLIQMPIFIGLYWMIFLSVELRQAP 458

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           + GWI DL+  DP                     I PI+M+++M++Q KMSPPP+D  QA
Sbjct: 459 WLGWIHDLSRPDPFY-------------------ILPILMAVTMYLQTKMSPPPSDPTQA 499

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            ++  MP++F      FPA L++Y+  +N+++I QQ +I +  
Sbjct: 500 QMMKIMPLMFSVMFFFFPAALVLYYVVNNLLTIAQQWLINRQT 542


>gi|325915704|ref|ZP_08178009.1| protein translocase subunit yidC [Xanthomonas vesicatoria ATCC
           35937]
 gi|325538121|gb|EGD09812.1| protein translocase subunit yidC [Xanthomonas vesicatoria ATCC
           35937]
          Length = 574

 Score =  299 bits (765), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 124/595 (20%), Positives = 232/595 (38%), Gaps = 61/595 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M +   + +   L V  +  W  +    +           Q+V      D S  A  +  
Sbjct: 1   MNQTRVFLIFAWLMVAALL-WMEW-GKDKAAANAPAVVATQSVPAARDPDASAPAANVPA 58

Query: 61  RAQALSMSPR----------------------VELKNPSLIGSINLKGAQFDDLNLRGYH 98
                                           + L +  L   ++  G    D  L  + 
Sbjct: 59  AQAIPQAGVPGAAPAATSTTTATPAAAGAAPVITLTSDVLRLKLD--GRSVLDAELLQFP 116

Query: 99  LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTP 155
                 +P+  L    +  + Y A   + S  + +            S         T  
Sbjct: 117 QTKDGTAPVSLL--TEDAVHPYNATSGWASEHSPVPGVGGFRAEQPGSTFELAKGQNTLV 174

Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214
           +  V+   N +   RT +L    Y   I D V N S          ++ R     +    
Sbjct: 175 VPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMT 234

Query: 215 GV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270
                   G       +    + + D       N   +  W+ +   ++ + +IP K+  
Sbjct: 235 NPDSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ- 293

Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
             +    L+    R  A+      T+ PG++ +T   L+ G K    +   E    + R 
Sbjct: 294 --ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVS-LIAKEDVKGLDRV 350

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
                +     I + +F ++S+ ++ + N+G +I+   V ++L  +PL+  QY S A M+
Sbjct: 351 VDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWSIIGLVVLLRLALYPLSAAQYKSGAKMR 410

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
             QP++ +L+E++     +  Q+A ++L+K   INP+ GC P+L+Q+P+FFA+Y V+  S
Sbjct: 411 RFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVES 469

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +E+R AP+ GWI+DL A DP                     I P++    M+   K++P 
Sbjct: 470 VELRQAPWLGWIQDLTARDPYF-------------------ILPVLNIAIMWATQKLTPT 510

Query: 511 P-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           P  D  QA ++ +MP+VF   ++  PAGL++YW  +  + ++ Q  +++ HG + 
Sbjct: 511 PGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 565


>gi|21326646|gb|AAL30086.1| 60Kd inner-membrane protein [Xanthomonas campestris pv. campestris]
          Length = 573

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 123/592 (20%), Positives = 230/592 (38%), Gaps = 56/592 (9%)

Query: 1   MERNWNYFVAIALS--VIIVYAWQNFYVYPRIEEMNNERK-----------------NIQ 41
           M +   + +   L    ++   W               +                  + Q
Sbjct: 1   MNQTRVFLIFAWLMVAALLWMEWGKDKAAANAPTPIASQAVPAARDPDAAAPAANVPSAQ 60

Query: 42  TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
            + Q        A             +P + L +  L   ++  G    D  L  +    
Sbjct: 61  AIPQAGSPAAVPATSTTTATPATTGAAPAITLTSDVLRLKLD--GRSVLDAELLQFPQTK 118

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKL 158
               P+  L    +  ++Y A   + S  + +            +         T  +  
Sbjct: 119 DGTEPVKLL--TEDAAHSYNATSGWASERSPVPGVGGFRAEQPGTTFELAKGQNTLVVPF 176

Query: 159 VFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV- 216
           V+   N +   R  +L    Y   I D V N S          ++ R     +       
Sbjct: 177 VWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNGYVFRKLSRVPTILSRGMTNPD 236

Query: 217 ---QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273
                G       +    + + D       N   +  W+ +   ++ + +IP K+    +
Sbjct: 237 SFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ---A 293

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
               L+    R  A+      T+ PG+S +T   L+ G K    +   E    + R    
Sbjct: 294 SLYVLAQDGPRDVAELRGPAFTVAPGQSASTEARLWVGPKLVSLLAK-EDVKGLDRVVDY 352

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
             +     I + +F ++S+ ++ + N+G AI+   V ++L  +PL+  QY S A M+  Q
Sbjct: 353 SRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQ 412

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P++ +L+E++     Q  Q+A ++L+K   INP+ GC P+L+Q+P+FFA+Y V+  S+E+
Sbjct: 413 PRLAQLKERYGD-DRQKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVEL 471

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512
           R AP+ GWI+DL A DP                     I P++    M+   K++P P  
Sbjct: 472 RQAPWLGWIQDLTARDPYF-------------------ILPVLNIAIMWATQKLTPTPGM 512

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           D  QA ++ +MP+VF   ++  PAGL++YW  +  + ++ Q  +++ HG + 
Sbjct: 513 DPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 564


>gi|241667555|ref|ZP_04755133.1| hypothetical protein FphipA2_02215 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876100|ref|ZP_05248810.1| inner-membrane protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842121|gb|EET20535.1| inner-membrane protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 551

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 141/574 (24%), Positives = 255/574 (44%), Gaps = 54/574 (9%)

Query: 7   YFVAIALSVIIVYA-WQNFYVYPRIEEMNNER-------KNIQTVKQPNQVDNSYAAVLI 58
             V IA+ +I +   W+  +     +    +         +  T        ++ A++  
Sbjct: 10  LLVTIAIMLISLMGRWEQTFPSNSSQSQTTQTQQDNSHYNSDTTATTNVSTSDAKASLTK 69

Query: 59  DDRAQALSMSPRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
                    +  V +         I+L        +L  Y + + + +P+  L +   ++
Sbjct: 70  TTSFSKYDDAKSVTINTDVFKNLKISLLDGAIISASLEDYSVSLDNKTPMALLTNEQGSE 129

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
             Y A+   V     +++      +     K       + L        +       D  
Sbjct: 130 --YIAKSTIVINKKPVDVN-----FESQGIKKENGKQVLTLTGSVDGLEITRTYTFDDAK 182

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231
           Y   I   + N + + +       + R       +            G      + S  +
Sbjct: 183 YNISISQNIKNTTSEPVNVIIDDSLARDFNPAGDSFSLLNAHSYTFTGVAYSTANDSFRK 242

Query: 232 QKYSDIEKSSISNFHESN---SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
           + + DI K++      ++    W+     Y+ S +IP       S+  Y +  +  ++A 
Sbjct: 243 ESFKDISKTNGQPTVINSQGLGWVAFIQHYFVSAWIPQSND---SKIYYKNLNNDVFEAG 299

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                I+I P +S +  + L++G      +         P  E  +D+G   F ++ +F 
Sbjct: 300 AYTG-ISIAPNQSESIDSVLYSGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           +M+  ++LVGN+G+AI+L T  +KL+F+PL+ K Y S A M+ +QP++  L+E +K    
Sbjct: 354 VMNQIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRVKRLQETYKD-DR 412

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q L K M+++YK   +NPL+GC P+L+QIP+F ++Y V+  S+E+R APF  WI DL+  
Sbjct: 413 QALGKKMMEMYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP                     + PI+M +SMF+Q K+SP PAD  QA I+ ++PV+F 
Sbjct: 473 DPYF-------------------VLPILMGISMFLQQKLSPAPADPMQAKIMMFLPVIFT 513

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           F  +SFP+GL++YW  +NVISI+QQ +I + + A
Sbjct: 514 FLFASFPSGLVLYWLTNNVISILQQWIITRHYQA 547


>gi|254375202|ref|ZP_04990682.1| inner-membrane protein [Francisella novicida GA99-3548]
 gi|151572920|gb|EDN38574.1| inner-membrane protein [Francisella novicida GA99-3548]
          Length = 551

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 139/574 (24%), Positives = 248/574 (43%), Gaps = 54/574 (9%)

Query: 7   YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
             V IA+  I +   W+  +     ++  +  +N       +   N+         + A 
Sbjct: 10  LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69

Query: 66  SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
             +         + +         ++L        +L+ Y + +   +P+  L   S ++
Sbjct: 70  ETNFSKYDNAKSITINTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
             Y A+   V     I +      +     K       + L        +       D  
Sbjct: 130 --YIAKSTIVVNKQPISVN-----FEDQGIKTENGKQILTLTGSADGLQITRTYTFDDTK 182

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231
           Y   +   + N +   +         R       +            G        S  +
Sbjct: 183 YNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242

Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
           + + DI K++      +     W+     Y+ S +IP      +++  Y +     ++A 
Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGNVFEAG 299

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                 TI P +S   ++ L+ G      +         P  E  +D+G   F ++ +F 
Sbjct: 300 AFTGA-TIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           +M++ ++LVGN+G+AI+L T  +KL+F+PL+ K Y S A M+ +QP+I  L+E +K    
Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q L K M++LYK   +NPL+GC P+L+QIP+F ++Y V+  S+E+R +PF  WI DL+  
Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQSPFIFWIHDLSMK 472

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP                     + P++M LSMF+Q K+SP PAD  QA ++ ++PV+F 
Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           F  +SFP+GL++YW  +N+ISI QQ +I + + A
Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547


>gi|167626982|ref|YP_001677482.1| hypothetical protein Fphi_0760 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189036351|sp|B0TW73|OXAA_FRAP2 RecName: Full=Inner membrane protein oxaA
 gi|167596983|gb|ABZ86981.1| conserved membrane protein of unknown function [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
          Length = 551

 Score =  298 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 140/574 (24%), Positives = 253/574 (44%), Gaps = 54/574 (9%)

Query: 7   YFVAIALSVIIVYA-WQNFYVYPRIEEMNNER-------KNIQTVKQPNQVDNSYAAVLI 58
             V IA+ +I +   W+  +     +    +         +           ++ A++  
Sbjct: 10  LLVTIAIMLISLMGRWEQTFPSNSSQSQTTQTQQDNSHYNSDTPATTNVSTSDAKASLTK 69

Query: 59  DDRAQALSMSPRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
                    +  V +         I+L        +L  Y + +   +P+  L     ++
Sbjct: 70  TTSFSKYDDAKSVTINTDVFKNLKISLLDGAIISASLEDYSVSLDDKTPMALLTDEQGSE 129

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
             Y A+   V     +++      +     K       + L        +       D  
Sbjct: 130 --YIAKSTIVINKKPVDVN-----FESQGIKKENGKQVLTLTGSVDGLEITRTYTFDDAK 182

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231
           Y   +   + N + + +       + R       +            G      + S  +
Sbjct: 183 YNISVSQNIKNTTSEPVSVIIDDSLARDFNPAGDSFSLLNAHSYTFTGVAYSTANDSFRK 242

Query: 232 QKYSDIEKSSISNFHESN---SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
           + + DI K++      ++    W+     Y+ S +IP       S+  Y +  +  ++A 
Sbjct: 243 ESFKDISKTNGQPTVINSQGLGWVAFIQHYFVSAWIPQSND---SKIYYKNLNNDVFEAG 299

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                I+I P +S +  + L++G      +         P  E  +D+G   F ++ +F 
Sbjct: 300 AYTG-ISIAPNQSESIDSVLYSGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           +M+  ++LVGN+G+AI+L T  +KL+F+PL+ K Y S A M+ +QP++  L+E +K    
Sbjct: 354 VMNQIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRVKRLQETYKD-DR 412

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           QVL K M+++YK   +NPL+GC P+L+QIP+F ++Y V+  S+E+R APF  WI DL+  
Sbjct: 413 QVLGKKMMEMYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP                     + PI+M +SMF+Q K+SP PAD  QA I+ ++PV+F 
Sbjct: 473 DPYF-------------------VLPILMGISMFLQQKLSPAPADPMQAKIMMFLPVIFT 513

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           F  +SFP+GL++YW  +NVISI+QQ +I + + A
Sbjct: 514 FLFASFPSGLVLYWLTNNVISILQQWIITRHYQA 547


>gi|148245070|ref|YP_001219764.1| hypothetical protein COSY_0941 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|166977423|sp|A5CVI2|OXAA_VESOH RecName: Full=Inner membrane protein oxaA
 gi|146326897|dbj|BAF62040.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 541

 Score =  298 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 142/573 (24%), Positives = 252/573 (43%), Gaps = 49/573 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN---ERKNIQTVKQPNQVDNSYAAVL 57
           M     +F+ IA+ + I   W  + +   I++ NN   + K   T    N + N    + 
Sbjct: 1   MNNQK-FFLIIAIFLSIFLLWDKWEITHTIDKNNNLISQTKIKNTSTINNSLTNQNLDIP 59

Query: 58  ID---------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
                            +  P   +K   L   I+ KG    +  L  Y +++ S     
Sbjct: 60  SVTNRNNKLDLPNTDTKNQIPFTTVKTDLLTLEISHKGGTIQNAWLNDYPIEIDSEQKFQ 119

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
            L   +      F     +     +   +S      I  ++      +   +K+ N I+ 
Sbjct: 120 LLSDRTGKI---FQAQSGLLPQGKMPTHHSIFSSKNIYYQMDGNNLVVPFTWKSENGIIV 176

Query: 169 ERTISLDEHYLFK-IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227
            +    +++     I   +TN + + +  +   +++R+ P           G        
Sbjct: 177 NKRYHFNKNSYVVGIDYQITNTTNNTLHITSYTQLIRNIPDQDNMIMPTYTGGARFNDQD 236

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + ++ D              W+ + + Y+    IP+         K ++D    Y  
Sbjct: 237 VYEKIEFEDF--DDQPKTSYKGGWMAMIEHYFFVAVIPNLNQIHTYSSKIINDK---YLL 291

Query: 288 KFSANEITILPGKSITT-TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
                E++I PG + T   + L+ G KE   I     D   P  +  +D+G  + IAKP+
Sbjct: 292 TVVNPELSIAPGATKTIINSNLYIGPKEQSHI-----DNVAPGLDKTVDYGILFIIAKPL 346

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
             L+++ Y+++ ++G +I++ T+ +KL F+ L++K Y S A M+ + P++ +L+E +  +
Sbjct: 347 SELLNWIYSIIHSWGYSIIILTLLIKLAFYKLSEKSYRSMAGMRQLAPRLKKLKETYGDN 406

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q L K  ++LYK   INP +GC PIL+QIPVF ++Y V+   +E+R AP + ++ DL+
Sbjct: 407 K-QKLGKKTMELYKKEKINPASGCLPILVQIPVFISLYWVLLEMVELRQAP-FWYLTDLS 464

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
           A DP                     I P+IM +SMFIQ K++PPP D  QA I+  +P V
Sbjct: 465 APDPYY-------------------ILPLIMGISMFIQQKLNPPPPDPIQAKIMMALPFV 505

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           F      FP+GL++YW  +N++SI QQ VI K 
Sbjct: 506 FTIFFLWFPSGLVLYWMINNILSITQQWVINKR 538


>gi|89255612|ref|YP_512973.1| inner-membrane protein [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314117|ref|YP_762840.1| inner membrane protein [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156501560|ref|YP_001427625.1| inner-membrane protein [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010123|ref|ZP_02275054.1| inner-membrane protein [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254367007|ref|ZP_04983043.1| conserved inner-membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|290953728|ref|ZP_06558349.1| inner membrane protein oxaA [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312914|ref|ZP_06803635.1| inner membrane protein oxaA [Francisella tularensis subsp.
           holarctica URFT1]
 gi|122325838|sp|Q0BNY1|OXAA_FRATO RecName: Full=Inner membrane protein oxaA
 gi|122501296|sp|Q2A5M8|OXAA_FRATH RecName: Full=Inner membrane protein oxaA
 gi|166975865|sp|A7N9L6|OXAA_FRATF RecName: Full=Inner membrane protein oxaA
 gi|89143443|emb|CAJ78619.1| Inner-membrane protein [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129016|gb|ABI82203.1| inner membrane protein [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134252833|gb|EBA51927.1| conserved inner-membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|156252163|gb|ABU60669.1| inner-membrane protein [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 551

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 141/574 (24%), Positives = 250/574 (43%), Gaps = 54/574 (9%)

Query: 7   YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
             V IA+  I +   W+  +     ++  +  +N       +   N+   +     + A 
Sbjct: 10  LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTITDAKSSLAK 69

Query: 66  SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
             +         + +         ++L        +L+ Y + +   +P+  L   S ++
Sbjct: 70  ETNFSKYDNAKSITINTVVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
             Y A+   V     I +      +     KI      + L        +       D  
Sbjct: 130 --YIAKSTIVVNKQPISVN-----FEDQGIKIENSKQILTLTGSADGLQITRTYTFDDTK 182

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231
           Y   +   + N +   +         R       +            G        S  +
Sbjct: 183 YNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242

Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
           + + DI K++      +     W+     Y+ S +IP      +++  Y +     ++A 
Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGDVFEAG 299

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                 TI P +S   ++ L+ G      +         P  E  +D+G   F ++ +F 
Sbjct: 300 AFTGA-TIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           +M++ ++LVGN+G+AI+L T  +KL+F+PL+ K Y S A M+ +QP+I  L+E +K    
Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q L K M++LYK   +NPL+GC P+L+QIP+F ++Y V+  S+E+R APF  WI DL+  
Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP                     + P++M LSMF+Q K+SP PAD  QA ++ ++PV+F 
Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           F  +SFP+GL++YW  +N+ISI QQ +I + + A
Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547


>gi|289662287|ref|ZP_06483868.1| putative inner membrane protein translocase component YidC
           [Xanthomonas campestris pv. vasculorum NCPPB702]
 gi|289667652|ref|ZP_06488727.1| putative inner membrane protein translocase component YidC
           [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 574

 Score =  297 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 127/595 (21%), Positives = 238/595 (40%), Gaps = 61/595 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M +   + +   L V  +  W  +    +           Q+V     +D +  +     
Sbjct: 1   MNQTRVFLIFAWLMVAALL-WMEW-GKEKAAANAPVAAATQSVPAARDLDATTPSAANVP 58

Query: 61  RAQALSMS----------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYH 98
            AQA+  +                      P V L +  L   ++  G    D  L  + 
Sbjct: 59  AAQAIPQAGAPGTVPATSTTGATPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELLQFP 116

Query: 99  LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTP 155
                 +P+  L    +  + Y A   + S  + +            +         T  
Sbjct: 117 QTKDGTAPVSLL--TEDAAHPYNATSGWASEHSPVPGVGGFRAEQPGTAFELAKGQDTLV 174

Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214
           +  V+   N +   RT +L    Y   I D V N S          ++ R     +    
Sbjct: 175 VPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMT 234

Query: 215 GV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270
                   G       +    + + D       N   +  W+ +   ++ + +IP K+  
Sbjct: 235 NPDSFSFNGATWYSPQEGYERRAFKDYMNDGGLNRQITGGWMALLQHHFFTAWIPQKDQ- 293

Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
             +    L+    R  A+      T+ PG++ +T   L+ G K    +   E    + R 
Sbjct: 294 --ASLYVLNQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVG-LIAKEDVKGLDRV 350

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
                +     I + +F ++S+ ++ + N+G AI+   V ++L  +PL+  QY S A M+
Sbjct: 351 VDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMR 410

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
             QP++ +L+E++     +  Q+A ++L+K   INP+ GC P+L+Q+P+FFA+Y V+  S
Sbjct: 411 RFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVES 469

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +E+R AP+ GWI+DL A DP                     I P++    M+   K++P 
Sbjct: 470 VELRQAPWLGWIQDLTARDPYF-------------------ILPLLNISIMWATQKLTPT 510

Query: 511 P-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           P  D  QA ++ +MP+VF   ++  PAGL++YW  +  + ++ Q  +++ HG + 
Sbjct: 511 PGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 565


>gi|254368609|ref|ZP_04984625.1| inner-membrane protein [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121512|gb|EDO65703.1| inner-membrane protein [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 551

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 141/574 (24%), Positives = 248/574 (43%), Gaps = 54/574 (9%)

Query: 7   YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
             V IA+  I +   W+        ++  +  +N       +   N+         + A 
Sbjct: 10  LLVTIAIMFISLMGKWEQTSPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69

Query: 66  SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
             +         + +         ++L        +L+ Y + +   +P+  L   S ++
Sbjct: 70  ETNFSKYDNAKSITINTVVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
             Y A+   V     I +      +     KI      + L        +       D  
Sbjct: 130 --YIAKSTIVVNKQPISVN-----FEDQGIKIENGKQILTLTGSADGLQITRTYTFDDTK 182

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231
           Y   +   + N +   +         R       +            G        S  +
Sbjct: 183 YNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242

Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
           + + DI K++      +     W+     Y+ S +IP      +++  Y +     ++A 
Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGDVFEAG 299

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                 TI P +S   ++ L+ G      +         P  E  +D+G   F ++ +F 
Sbjct: 300 AFTGA-TIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           +M++ ++LVGN+G+AI+L T  +KL+F+PL+ K Y S A M+ +QP+I  L+E +K    
Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q L K M++LYK   +NPL+GC P+L+QIP+F ++Y V+  S+E+R APF  WI DL+  
Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           DP                     + P++M LSMF+Q K+SP PAD  QA ++ ++PV+F 
Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           F  +SFP+GL++YW  +N+ISI QQ +I + + A
Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547


>gi|325983266|ref|YP_004295668.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Nitrosomonas sp. AL212]
 gi|325532785|gb|ADZ27506.1| membrane protein insertase, YidC/Oxa1 family domain containing
           [Nitrosomonas sp. AL212]
          Length = 642

 Score =  296 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 143/601 (23%), Positives = 258/601 (42%), Gaps = 50/601 (8%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFY--VYPRIEEMNNERKNIQTVKQ---PNQVDNSY--- 53
                  + I  S  +++ W  +   +YP   ++     + ++  Q   P  V       
Sbjct: 1   METKKLLLIIIFSTSLLFLWDAWQKELYPPSSQVMPGATSTESSNQRHDPLPVPGDELAA 60

Query: 54  -----------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
                        V          +  ++++K   +I  I+  G     L L  +     
Sbjct: 61  SAAESSAVLGIEGVSPSVTPNLFPIGEKIQVKTDMVIAEIDTAGGDIRQLGLIEHPSRED 120

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
            N P   LL  +       + L      N+               +       ++LV   
Sbjct: 121 INKPYELLLDKTARFQVAQSGLIGDGLPNHKTKYTVEDNKYSYQLEPGQEKVVVRLVAPE 180

Query: 163 ANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIM--RHKPQTATNTFGVQEG 219
           A+ I   +  +     Y+  +   + N+S   I      +++   ++P  A        G
Sbjct: 181 ADGIQVTKIYTFHRGSYVIDVEFEIANHSEAAIIPFSYFQMLRDPNEPVGAGALVHSYTG 240

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
                 D+  ++ K+SD++K+      +  N W+ + + Y+ + ++P   +      K L
Sbjct: 241 AAMYTDDEKFLKIKFSDLDKNKAEYPTNADNGWIAMLEHYFLTAWLPEPGSPREYFAKRL 300

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
           +     Y A   A   T+ P +    +   +AG +E   +         P  E+ +D+GW
Sbjct: 301 APNQ--YTAGVIAPVGTVEPDRVKNISMPFYAGPQEQNKLAELA-----PGLELTVDYGW 353

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              +AKP+F L+S++++   N+GIAI+L T+ VKL+FFPL+   Y S A ++ + PK+  
Sbjct: 354 LTVLAKPLFWLLSFYHSWTDNWGIAIILLTLTVKLIFFPLSAAGYRSMAKLRVVTPKLQR 413

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +RE++  S  Q + +AM++ YK   INP+ GC PIL+QIPVF A++  +  ++E+R+AP 
Sbjct: 414 IREQYA-SDRQRMHQAMMEFYKEEKINPMGGCLPILVQIPVFIALFWTLLAAVELRYAPL 472

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
             WI D++  DP                     + P+IM +SM++Q K+SP PAD  QA 
Sbjct: 473 ALWITDMSVPDPYY-------------------VLPVIMGVSMWVQSKLSPTPADPIQAK 513

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           ++  MP+ F      FP+GL++Y   +N++SI QQ  I +M+  +            K  
Sbjct: 514 VMQIMPIAFSIFFFFFPSGLVLYSLCNNILSIAQQWQITRMYENKAEEEANKDRNKKKTK 573

Query: 579 N 579
           N
Sbjct: 574 N 574


>gi|208780038|ref|ZP_03247381.1| 60Kd inner membrane protein [Francisella novicida FTG]
 gi|208744042|gb|EDZ90343.1| 60Kd inner membrane protein [Francisella novicida FTG]
          Length = 530

 Score =  296 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 136/559 (24%), Positives = 242/559 (43%), Gaps = 53/559 (9%)

Query: 21  WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS-------PRVEL 73
           W+  +     ++  +  +N       +   N+         + A   +         + +
Sbjct: 4   WEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAKETNFSKYDNAKSITI 63

Query: 74  KNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANN 132
                    ++L        +L+ Y + +   +P+  L   S ++  Y A+   V     
Sbjct: 64  NTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE--YIAKSTIVVNKQP 121

Query: 133 IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSID 192
           I +      +     K       + L        +       D  Y   +   + N +  
Sbjct: 122 ISVN-----FEDQGIKTENGKQILTLTGSADGLQITRTYTFDDTKYNISVSQNIKNTTSA 176

Query: 193 QIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246
            +         R       +            G        S  ++ + DI K++     
Sbjct: 177 PVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRKESFKDISKTNGQPTV 236

Query: 247 ES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303
            +     W+     Y+ S +IP      +++  Y +     ++A       TI P +S  
Sbjct: 237 INSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGDVFEAGAFTGA-TIAPNQSEN 292

Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363
            ++ L+ G      +         P  E  +D+G   F ++ +F +M++ ++LVGN+G+A
Sbjct: 293 ISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFWVMNHIHSLVGNWGLA 347

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L T  +KL+F+PL+ K Y S A M+ +QP+I  L+E +K    Q L K M++LYK   
Sbjct: 348 IILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DRQALGKKMMELYKEEK 406

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           +NPL+GC P+L+QIP+F ++Y V+  S+E+R APF  WI DL+  DP             
Sbjct: 407 VNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMKDPYF----------- 455

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
                   + P++M LSMF+Q K+SP PAD  QA ++ ++PV+F F  +SFP+GL++YW 
Sbjct: 456 --------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFTFLFASFPSGLVLYWL 507

Query: 544 WSNVISIVQQAVIMKMHGA 562
            +N+ISI QQ +I + + A
Sbjct: 508 TNNLISISQQWIITRHYQA 526


>gi|21245084|ref|NP_644666.1| inner membrane protein translocase component YidC [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|38503062|sp|Q8PEH7|OXAA_XANAC RecName: Full=Inner membrane protein oxaA
 gi|21110818|gb|AAM39202.1| 60 kDa inner-membrane protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 574

 Score =  296 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 126/595 (21%), Positives = 237/595 (39%), Gaps = 61/595 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M +   + +   L V  +  W  +    +           Q+V     +D +  +     
Sbjct: 1   MNQTRVFLIFAWLMVAALL-WMEW-GKDKAAANAPVVAATQSVPAARDLDAATPSAANVP 58

Query: 61  RAQALSMS----------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYH 98
            AQA+  +                      P V L +  L   ++  G    D  L  + 
Sbjct: 59  AAQAIPQAGAPGAVPATSTTAATPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELLQFP 116

Query: 99  LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN---TVWNLISGKILTPTTP 155
                 +P+  L    +  + Y A   + S  + +                      T  
Sbjct: 117 QTKDGTAPVSLL--TEDPAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFDMAKGQNTLV 174

Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214
           +  V+   + +   RT +L    Y   I D V N S          ++ R     +    
Sbjct: 175 VPFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMT 234

Query: 215 GV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270
                   G       +    + + D       N   +  W+ +   ++ + +IP K+  
Sbjct: 235 NPDSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ- 293

Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
             +    L+    R  A+      T+ PG++ +T   L+ G K    +   E    + R 
Sbjct: 294 --ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVS-LIAKEDVKGLDRV 350

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
                +     I + +F ++S+ ++ + N+G AI+   V ++L  +PL+  QY S A M+
Sbjct: 351 VDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMR 410

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
             QP++ +L+E++     +  Q+A ++L+K   INP+ GC P+L+Q+P+FFA+Y V+  S
Sbjct: 411 RFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVES 469

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +E+R AP+ GWI+DL A DP                     I P++    M+   K++P 
Sbjct: 470 VELRQAPWLGWIQDLTARDPYF-------------------ILPLLNISIMWATQKLTPT 510

Query: 511 P-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           P  D  QA ++ +MP+VF   ++  PAGL++YW  +  + ++ Q  +++ HG + 
Sbjct: 511 PGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 565


>gi|319788688|ref|YP_004148163.1| membrane protein insertase, YidC/Oxa1 family [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317467200|gb|ADV28932.1| membrane protein insertase, YidC/Oxa1 family [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 567

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 141/590 (23%), Positives = 241/590 (40%), Gaps = 57/590 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M +   + +   L V ++  W  +                   +       + A      
Sbjct: 1   MNQTRVFLILAWLMVAVLL-WMEWGKEQAAPAAAAPAPTTAVAQDAIPQPVAAAPAADGS 59

Query: 61  ---------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
                           A A + + R+   +  L   ++  G      +L  +  D + + 
Sbjct: 60  VPAAAAAALPAAQAEAAPAAASAQRIVASSDVLQLVLD--GGSVVQADLLQFPRDRNGDG 117

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFK 161
             V L   +     Y A+  +VS +       S  V      + +      +  +  V++
Sbjct: 118 TAVRLFDTAPASF-YAAQSGWVSASGAAPTHLSGFVPAEPQREYVLAEGADSVEVPFVWQ 176

Query: 162 NANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP---QTATNTFGVQ 217
             N +   RT  L    Y   + D V N      +     +++R  P   +  T+     
Sbjct: 177 GDNGVQIRRTYVLSRGAYAVTVRDEVVNAGSAPWQGQVYRQLVRKPPVIERGYTSPESFS 236

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
               A         +   D  +    N   SN W+ +   ++ + ++P+      +    
Sbjct: 237 FNGAAWYDGSYDRRKFDEDYIEDGKLNLQTSNGWVAMLQHHFFTAWLPAGTQQ--AGTIS 294

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337
           L     R   +  AN + + PG + T+   L+ G K    I        +P  E  +D+ 
Sbjct: 295 LDQVGDRALVREVANPLVVAPGSTATSEARLYVGPKLVSEIRAQ----GVPGLERAVDYS 350

Query: 338 WFYFIA---KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            F  +A   + +F ++S+ Y+L GN+G AI+   V VK L +PL+  QY S A M+  QP
Sbjct: 351 QFTILAVLGEGLFWVLSHMYDLFGNWGWAIIGLVVVVKALMYPLSAAQYKSFAKMRKFQP 410

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           +I +L+E++     Q  Q AM++LYK   INP+ GC PIL+Q+PVF A+Y V+  S+E+R
Sbjct: 411 RIQQLKERY-GEDRQKFQMAMMELYKKEKINPMGGCLPILVQMPVFLALYWVLVESVELR 469

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-AD 513
           HAP+  WI+DL A DP                     I P+I    M+   K+ P P  D
Sbjct: 470 HAPWILWIQDLTARDPFF-------------------ILPVINVAVMWFTQKLQPAPGMD 510

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             Q  ++ +MP+VF   ++ FPAGL++YW  +  + ++QQ  +MK HG  
Sbjct: 511 PMQQKMMQFMPLVFGVMMAFFPAGLVLYWVTNGALGLLQQWWMMKRHGEP 560


>gi|298528960|ref|ZP_07016363.1| membrane protein insertase, YidC/Oxa1 family [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510396|gb|EFI34299.1| membrane protein insertase, YidC/Oxa1 family [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 598

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 126/581 (21%), Positives = 231/581 (39%), Gaps = 59/581 (10%)

Query: 21  WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA------------LSMS 68
           W   +     +      +       P + D +      ++                    
Sbjct: 20  WNLLFPPQTPDREEVREEERLEETVPEERDLAPEPDPREEAEDTWDPHEAQIPGFEPEEG 79

Query: 69  PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128
            ++++  P    + N  G   +   L+ Y  D+  ++P+V L++P +        +    
Sbjct: 80  EQIKVDTPLYQATFNSAGGILEHFVLKEYKQDIEPDAPMVDLVTPRSLARG---PMGITW 136

Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN 188
                 +     +              +    +            + + Y  +    V N
Sbjct: 137 NRAPTWIEGEWALNGEDLDLEPGDEKTLTFTGRMGGVKFIREMTFVADTYKIQENLQVVN 196

Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES 248
            +  Q        +    P  + +               S       +   S   + +  
Sbjct: 197 TTEAQASGEIANILA--GPAFSDSRLNPTRLGYYDQDGLSHE----REGNLSDGISRNTG 250

Query: 249 NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL 308
             W GI D Y+    +P+              G   +Q   S +     P  S T     
Sbjct: 251 IQWAGIVDHYFMLTLVPASPD----VQLQAHHGDDLFQISLSKSMYLE-PETSQTMDQIY 305

Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368
           + G K+   +            E  I +GWF  +A+P+  ++ +FY    N+G+AI+L T
Sbjct: 306 YLGPKDREYLEGAPN-----HLEESIYYGWFNLLAQPLMKVLHFFYQYTANYGVAILLLT 360

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428
           + +K++F+PL+ K Y S   MK +QP + ++REK K    + + + +++LYKT+ +NPL 
Sbjct: 361 LVIKIIFWPLSHKSYKSMNQMKKLQPMMTKIREKHKD-DRKAMNEEIMRLYKTYKVNPLG 419

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIKDLAAADPTNIFTLFGIL 480
           GC PIL+QIPVF A+Y+ +  S+E+RHAPF          W+ DL+A DP          
Sbjct: 420 GCLPILVQIPVFIALYQGLLGSVELRHAPFISHIPFTDIVWLADLSARDPFY-------- 471

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
                      I P++M  +MF+Q +M+P P D  QA I+ ++P+VF+F   +FP+GL+I
Sbjct: 472 -----------ITPLLMGATMFLQQRMAPAPGDPLQARIMQFLPLVFIFIFITFPSGLVI 520

Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           YW  +NV+SI QQ  +++     +   ++  +  +   +  
Sbjct: 521 YWLANNVLSIGQQWYMLRSADVPLQKAEQKAAEKAGKSSRD 561


>gi|256830920|ref|YP_003159648.1| 60 kDa inner membrane insertion protein [Desulfomicrobium baculatum
           DSM 4028]
 gi|256580096|gb|ACU91232.1| 60 kDa inner membrane insertion protein [Desulfomicrobium baculatum
           DSM 4028]
          Length = 534

 Score =  293 bits (749), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 142/568 (25%), Positives = 249/568 (43%), Gaps = 45/568 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           M+ N    +A++LS++++  W   +   P +E              P   D +       
Sbjct: 1   MDSNKRVILAVSLSLLVLLGWNYIFPPAPPLETAPQNLSAPNQTAAPASQDAAQVMPSSP 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
                 S   ++ +  P     IN  G   +   L+ Y   +   S  + L++  +    
Sbjct: 61  TVQFIPSKGEKLSVDTPLYRAVINSSGGVLESFELKEYKETIDPGSKNIDLVTAQSVTK- 119

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
             A +  +  +         TV           +  I+L        +          Y 
Sbjct: 120 --APMGLIWNSLPTWAQGEWTVQGGDLDLAAGQSGTIQLSGVVGGVQMDRVLTFTGGTYE 177

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
            K    VTN +  Q++      +        ++ + + +  IA +   SL E+      +
Sbjct: 178 VKEEVKVTNVTAAQVQGHLAFSVSSVPLTAESDKYNMTK--IAYMAAGSLTEEDSQKDLQ 235

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
             + +   +  W GI   Y+    +P+    F       +           A+++ + PG
Sbjct: 236 IGVESTAPAQ-WGGIESNYFLLAMVPTSSDMF-----ARAKLEDNVYRMTVADQVLLDPG 289

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359
            +   T   + G K    +    KD      +  + +G+F+ IA+P+   +++ Y  VGN
Sbjct: 290 ITQLRTVSYYFGPKTEKDLSLMPKD-----LKGSMHYGFFHIIAQPLNQFLNFLYGYVGN 344

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +GIAI++ T+ +KLLF+PL+ K Y S   MK +QP + ++REK+     ++    ++QLY
Sbjct: 345 YGIAIIILTIIIKLLFWPLSHKSYKSMEQMKKLQPMMAKIREKYADDREKMNS-EIMQLY 403

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIKDLAAADPT 471
           KT+ +NP  GC P+LLQIPVFFA+Y+ +  ++E+RHA F          W+ DL+A DP 
Sbjct: 404 KTYKVNPAGGCVPMLLQIPVFFALYQALLGAIELRHAAFIPTLPFTDLVWLADLSAKDPY 463

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531
                               I P+IM  +MF+Q ++SPP  D  QA I+ +MPV+F F  
Sbjct: 464 Y-------------------ITPLIMGATMFLQQRLSPPMGDPMQAKIMMFMPVIFTFLF 504

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            +FP+GL++YW  +NV+SI QQ+ ++K 
Sbjct: 505 LNFPSGLVVYWLVNNVLSIAQQSYMIKK 532


>gi|145628056|ref|ZP_01783857.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae 22.1-21]
 gi|144979831|gb|EDJ89490.1| putative inner membrane protein translocase component YidC
           [Haemophilus influenzae 22.1-21]
          Length = 514

 Score =  293 bits (749), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 128/541 (23%), Positives = 230/541 (42%), Gaps = 41/541 (7%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             +    + +AL  I    +Q + +         +  +I           S +  + D +
Sbjct: 1   MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + L+N      I+  G       L  Y  ++ S +P   L      ++ Y 
Sbjct: 61  ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177
           A+   +   N I+  +    + +            +  + L+F+       +  +     
Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y   +   + N S   I   P G++     +++ N         A     +  ++     
Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSDTNYKKYSFAD 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            + +  +      W+ +   Y+ S +IP+++ +    +      +      +    +TI 
Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G   T T+ L+ G K    +     +      ++ +D+GW +FIAKP+F L+++   +V
Sbjct: 293 SGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+  T+ VK + +PL K QY S A M+ +QPK+ E+RE+F     Q + + M++
Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC PILLQ+P+F A+Y     ++E+RHAPF+GWI+DL+A DP       
Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I PI+M +SMF+  KMSP P  D  Q  ++N+      F   SF  
Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNF--YAISFLC-SFSC 504

Query: 537 G 537
           G
Sbjct: 505 G 505


>gi|116750023|ref|YP_846710.1| 60 kDa inner membrane insertion protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|166977422|sp|A0LLH3|OXAA_SYNFM RecName: Full=Inner membrane protein oxaA
 gi|116699087|gb|ABK18275.1| protein translocase subunit yidC [Syntrophobacter fumaroxidans
           MPOB]
          Length = 553

 Score =  293 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 141/569 (24%), Positives = 249/569 (43%), Gaps = 29/569 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFY-----VYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55
           ME      +A+ LS++++  W+ ++       P   +             P  V    A 
Sbjct: 1   ME--KRALIALVLSLLVLVFWEMYFGLFRMPAPPPNKTEQAAPTTTQPATPQTVPPQAAT 58

Query: 56  VLIDDRAQALSMSPRVE---LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
                +        + +   +++P    +I   GA+     L+ +   V  +SP + +++
Sbjct: 59  PQALPQDHVFRPDQQFQSWAIEDPLYRMNIIAPGARLSSFELKKHRKAVQPDSPPMQMVT 118

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
                  Y      +    + +L             +L    P  L F          T 
Sbjct: 119 SQTG--GYLPMAIDLLHHQDWQLSTRPFFSEAGPKTVLEDKKPRVLSFSTEVPGKVRVTK 176

Query: 173 SL---DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
           S     E YL  +   + N S +++                          +  L   SL
Sbjct: 177 SFTCSPESYLLDLEVQIGNLSSERLVDQMGISFYFLPFSPPEEESSYNPSQLTTLEKGSL 236

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
                 D+ KS +       +W+   + ++ +  IP  E  +    + L       Q  +
Sbjct: 237 KNFTTKDLSKSDLVL-KPPMTWVAYENNFFINAIIPVAEGGYQFVPRILDATKGLLQLVY 295

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
             +   +   ++ +     + G KE  T+   E           +D+GWF FIAKP+  +
Sbjct: 296 LTDPFQLEGNETKSFKLRFYIGPKELSTLARAEHQ-----LASAVDYGWFTFIAKPLVYV 350

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + +FY    N+G+AI+L T+ +K+LF+PL +K Y S   MK IQPK+ ++REK+K    +
Sbjct: 351 LDWFYRYTHNWGVAIILLTIVIKILFWPLTQKSYQSMQKMKKIQPKMTQIREKYKGDREK 410

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
           +  + ++ LY+T+ +NP+ GC P+LLQIPVFFA+Y++++ ++E+RH PF  WI DL A D
Sbjct: 411 M-NQELMGLYRTYKVNPMGGCLPMLLQIPVFFALYRMLNGAVELRHEPFMLWIDDLTAPD 469

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529
                     + F +P    + +  ++M ++MFIQ KM+P   D  Q  I+  MPV+F  
Sbjct: 470 RL-------PIGFDIPYLGGLPVLTLLMGITMFIQQKMTPSAGDPRQDQIMMIMPVMFTV 522

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              +FP+GL++YW  +NV+SI QQ  + +
Sbjct: 523 FFVNFPSGLVLYWLVNNVLSIAQQYWVNR 551


>gi|294627440|ref|ZP_06706024.1| inner membrane protein translocase component YidC [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|292598261|gb|EFF42414.1| inner membrane protein translocase component YidC [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
          Length = 574

 Score =  293 bits (748), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 120/593 (20%), Positives = 232/593 (39%), Gaps = 57/593 (9%)

Query: 1   MERNWNYFVAIALS--VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M +   + +   L    ++   W               +             ++      
Sbjct: 1   MNQTRVFLIFAWLMVAALLWMEWGKDKAAANAPVAAATQSVPAARDLDAAAPSAANVPAA 60

Query: 59  DDRAQALSMS------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
               QA +                    P V + +  L   ++  G    D  L  +   
Sbjct: 61  QSIPQAGAPGTVPATSSTAATPAAAGAAPVVTVTSDVLRLKLD--GRSVLDAELLQFPQT 118

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPIK 157
               +P+  L    +  + Y A   + S  + +            +   +     T  + 
Sbjct: 119 KDGTAPVSLL--TEDPAHPYNATSGWASERSPVPGVAGFRAEQPGTTFEMAKGQNTLVVP 176

Query: 158 LVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216
            V+   +++   RT +L    Y   I D V N S          ++ R     +      
Sbjct: 177 FVWNGPDDVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMTNP 236

Query: 217 ----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
                 G       +    + + D       N   +  W+ +   ++ + +IP K+    
Sbjct: 237 DSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ--- 293

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
           +    L+    R  A+      T+ PG++ +T   L+ G K    +   E    + R   
Sbjct: 294 ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVS-LIAKEDVKGLDRVVD 352

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
              +     I + +F ++S+ ++ + N+G AI+   V ++L  +PL+  QY S A M+  
Sbjct: 353 YSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRRF 412

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QP++ +L+E++     +  Q+A ++L+K   INP+ GC P+L+Q+P+FFA+Y V+  S+E
Sbjct: 413 QPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVE 471

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511
           +R AP+ GWI+DL A DP                     I P++    M+   K++P P 
Sbjct: 472 LRQAPWLGWIQDLTARDPYF-------------------ILPLLNISIMWATQKLTPTPG 512

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            D  QA ++ +MP+VF   ++  PAGL++YW  +  + ++ Q  +++ HG + 
Sbjct: 513 MDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 565


>gi|294665120|ref|ZP_06730423.1| inner membrane protein translocase component YidC [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
 gi|292605121|gb|EFF48469.1| inner membrane protein translocase component YidC [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
          Length = 574

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 124/595 (20%), Positives = 239/595 (40%), Gaps = 61/595 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M +   + +   L V  +  W  +    +           Q+V     +D +  +     
Sbjct: 1   MNQTRVFLIFAWLMVAALL-WMEW-GKDKAAANAPVAAATQSVPAARDLDAAPPSAANVP 58

Query: 61  RAQALSMS----------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYH 98
            AQ++  +                      P V + +  L   ++  G    D  L  + 
Sbjct: 59  AAQSIPQAGAPGTVPATSSTAATPAAAGAAPVVTVTSDVLRLKLD--GRSVLDAELLQFP 116

Query: 99  LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTP 155
                 +P+  L    +  + Y A   + S  + +            +   +     T  
Sbjct: 117 QTKDGTAPVSLL--TEDPAHPYNATSGWASERSPVPGVAGFRAEQPGTTFEMAKGQNTLV 174

Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214
           +  V+   + +   RT +L    Y   I D V N S          ++ R     +    
Sbjct: 175 VPFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMT 234

Query: 215 GV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270
                   G       +    + + D       N   +  W+ +   ++ + +IP K+  
Sbjct: 235 NPDSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ- 293

Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
             +    L+    R  A+      T+ PG++ +T   L+ G K    +   E    + R 
Sbjct: 294 --ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVS-LIAKEDVKGLDRV 350

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
                +     I + +F ++S+ ++ + N+G AI+   V ++L  +PL+  QY S A M+
Sbjct: 351 VDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMR 410

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
             QP++ +L+E++     +  Q+A ++L+K   INP+ GC P+L+Q+P+FFA+Y V+  S
Sbjct: 411 RFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVES 469

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +E+R AP+ GWI+DL A DP                     I P++    M+   K++P 
Sbjct: 470 VELRQAPWLGWIQDLTARDPYF-------------------ILPLLNISIMWATQKLTPT 510

Query: 511 P-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           P  D  QA ++ +MP+VF   ++  PAGL++YW  +  + ++ Q  +++ HG + 
Sbjct: 511 PGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 565


>gi|188993861|ref|YP_001905871.1| putative inner membrane protein translocase component YidC
           [Xanthomonas campestris pv. campestris str. B100]
 gi|254778172|sp|B0RMM6|OXAA_XANCB RecName: Full=Inner membrane protein oxaA
 gi|167735621|emb|CAP53839.1| inner membrane insertion protein [Xanthomonas campestris pv.
           campestris]
          Length = 575

 Score =  292 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 124/595 (20%), Positives = 233/595 (39%), Gaps = 60/595 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M +   + +   L V  +  W  +              +       +    + AA +   
Sbjct: 1   MNQTRVFLIFAWLMVAALL-WMEWGKDKAAANAPTPIASQAVPAARDPDAAAPAANVPSA 59

Query: 61  RAQALSMSP----------------------RVELKNPSLIGSINLKGAQFDDLNLRGYH 98
           +A   + SP                       + L +  L   ++  G    D  L  + 
Sbjct: 60  QAIPQAGSPAAVPGTSTTTATATPVAAGAAPAITLTSDVLRLKLD--GRSVLDAELLQFP 117

Query: 99  LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTP 155
                  P+  L    +  + Y A   + S  + +            +         T  
Sbjct: 118 QTKDGTEPVKLL--TEDAAHPYNATSGWASERSPVPGVGGFRAEQPGTTFELAKGQNTLV 175

Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214
           +  V+   N +   R  +L    Y   I D V N S          ++ R     +    
Sbjct: 176 VPFVWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNGYVFRKLSRVPTILSRGMT 235

Query: 215 GV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270
                   G       +    + + D       N   +  W+ +   ++ + +IP K+  
Sbjct: 236 NPDSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ- 294

Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
             +    L+    R  A+      T+ PG+S +T   L+ G K    +   E    + R 
Sbjct: 295 --ASLYVLAQDGPRDVAELRGPAFTVAPGQSASTEARLWVGPKLVSLLAK-EDVKGLDRV 351

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
                +     I + +F ++S+ ++ + N+G AI+   + ++L  +PL+  QY S A M+
Sbjct: 352 VDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVLLLRLALYPLSAAQYKSGAKMR 411

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
             QP++ +L+E++     Q  Q+A ++L+K   INP+ GC P+L+Q+P+FFA+Y V+  S
Sbjct: 412 RFQPRLAQLKERYGD-DRQKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVES 470

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +E+R AP+ GWI+DL A DP                     I P++    M+   K++P 
Sbjct: 471 VELRQAPWLGWIQDLTARDPYF-------------------ILPVLNIAIMWATQKLTPT 511

Query: 511 P-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           P  D  QA ++ +MP+VF   ++  PAGL++YW  +  + ++ Q  +++ HG + 
Sbjct: 512 PGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 566


>gi|78050041|ref|YP_366216.1| putative inner membrane protein translocase component YidC
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|123583682|sp|Q3BLZ7|OXAA_XANC5 RecName: Full=Inner membrane protein oxaA
 gi|78038471|emb|CAJ26216.1| preprotein translocase subunit YidC [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 574

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 124/594 (20%), Positives = 232/594 (39%), Gaps = 59/594 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF---------------------YVYPRIEEMNNERKN 39
           M +   + +   L V  +  W  +                                   +
Sbjct: 1   MNQTRVFLIFAWLMVAALL-WMEWGKDKAAANAPVAAATQAVPAARDPDAAAPSAANVPS 59

Query: 40  IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99
            Q + Q        A         A   +P V L +  L   ++  G    D  L  +  
Sbjct: 60  AQPIPQAGAPGTVPATSSTAATPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELLQFPQ 117

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPI 156
                 P+  L    +  + Y A   + S  + +            +   +     T  +
Sbjct: 118 TKDGTEPVSLL--TEDPAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFEMAKGQNTLVV 175

Query: 157 KLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
             V+   + +   RT +L    Y   I D V N S          ++ R     +     
Sbjct: 176 PFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMTN 235

Query: 216 V----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
                  G       +    + + D       N   +  W+ +   ++ + +IP K+   
Sbjct: 236 PDSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ-- 293

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            +    L+    R  A+      T+ PG++ +T   L+ G K    +   E    + R  
Sbjct: 294 -ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVN-LIAKEDVKGLDRVV 351

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
               +     I + +F ++S+ ++ + N+G AI+   V ++L  +PL+  QY S A M+ 
Sbjct: 352 DYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRR 411

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
            QP++ +L+E++     +  Q+A ++L+K   INP+ GC P+L+Q+P+FFA+Y V+  S+
Sbjct: 412 FQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESV 470

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+R AP+ GWI+DL A DP                     I P++    M+   K++P P
Sbjct: 471 ELRQAPWLGWIQDLTARDPYF-------------------ILPLLNISIMWATQKLTPTP 511

Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
             D  QA ++ +MP+VF   ++  PAGL++YW  +  + ++ Q  +++ HG + 
Sbjct: 512 GMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 565


>gi|325926222|ref|ZP_08187580.1| Preprotein translocase subunit YidC [Xanthomonas perforans 91-118]
 gi|325543404|gb|EGD14829.1| Preprotein translocase subunit YidC [Xanthomonas perforans 91-118]
          Length = 574

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 124/594 (20%), Positives = 233/594 (39%), Gaps = 59/594 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF---------------------YVYPRIEEMNNERKN 39
           M +   + +   L V  +  W  +                                   +
Sbjct: 1   MNQTRVFLIFAWLMVAALL-WMEWGKDKAAANAPVAAATQAVPAARDPDAAAPSAANVPS 59

Query: 40  IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99
            Q + Q        A         A   +P V L +  L   ++  G    D  L  +  
Sbjct: 60  AQPIPQAGAPGTVPATSSTAATPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELLQFPQ 117

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPI 156
                +P+  L    +  + Y A   + S  + +            +   +     T  +
Sbjct: 118 TKDGTAPVSLL--TEDPAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFEMAKGQNTLVV 175

Query: 157 KLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
             V+   + +   RT +L    Y   I D V N S          ++ R     +     
Sbjct: 176 PFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMTN 235

Query: 216 V----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
                  G       +    + + D       N   +  W+ +   ++ + +IP K+   
Sbjct: 236 PDSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ-- 293

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            +    L+    R  A+      T+ PG++ +T   L+ G K    +   E    + R  
Sbjct: 294 -ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVS-LIAKEDVKGLDRVV 351

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
               +     I + +F ++S+ ++ + N+G AI+   V ++L  +PL+  QY S A M+ 
Sbjct: 352 DYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRR 411

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
            QP++ +L+E++     +  Q+A ++L+K   INP+ GC P+L+Q+P+FFA+Y V+  S+
Sbjct: 412 FQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESV 470

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E+R AP+ GWI+DL A DP                     I P++    M+   K++P P
Sbjct: 471 ELRQAPWLGWIQDLTARDPYF-------------------ILPLLNISIMWATQKLTPTP 511

Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
             D  QA ++ +MP+VF   ++  PAGL++YW  +  + ++ Q  +++ HG + 
Sbjct: 512 GMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 565


>gi|206890197|ref|YP_002249042.1| inner membrane protein OxaA [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742135|gb|ACI21192.1| inner membrane protein OxaA [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 513

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 136/561 (24%), Positives = 238/561 (42%), Gaps = 60/561 (10%)

Query: 6   NYFVAIALSVIIVYA----WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             F+A+ LS+ I++     +  +Y    +++   E K     + P  V           +
Sbjct: 7   RAFLAVILSMAILFGSQYLYTKYYKPSEVQQQPVEVKKEDKKQIPQSVQPEPLKKEEPKQ 66

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
                    V ++N      ++ +GA    + L+ Y     ++   + L S         
Sbjct: 67  ISKDIKYREVSIENDVFKVILSNEGATIKSVELKKYK---DNSGKPIILTSSD------- 116

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181
             L    + +     +        S      +    +VF   ++ +F +         + 
Sbjct: 117 -ILPLSISKDGKFNYSKVMFNIDDSNVSFKNSNQAVVVFTYNDSNIFLKRTFFFNKTDYV 175

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
           I              +        + + + +           +  K     + +  +   
Sbjct: 176 IDIKEEVKGFGSYYVTLGKDFGIFEKEDSPHW--------GPVILKEADRIELNPSKIKE 227

Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301
            + + E   W+   DKY+ S  +P  + +      Y  D     +               
Sbjct: 228 TNTYKEGVKWIAQEDKYFFSAIVPVTKANQFVVLPYNGDALTGVEFN------------D 275

Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361
              +  +FA  KE+  +  +         E ++D+G+F  IA+P+F  +   Y+L+GN+G
Sbjct: 276 GINSYRVFAAPKEYDYLKKFNV-----GLEHIVDFGFFSIIARPLFWFLKLLYSLIGNYG 330

Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421
           IAI++ T+ V++ F P+  +   S   +  +QPK+ +L+E++K   PQ LQK M++LYK 
Sbjct: 331 IAIIILTILVRIPFIPIVNRGQKSMQKLSELQPKLMQLKEQYKN-DPQRLQKEMMELYKK 389

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           + INP++GC P+LLQIPVFFA+YK+++I++E+R APF  WI DL+A DP           
Sbjct: 390 YKINPMSGCLPMLLQIPVFFALYKILTIAIELRQAPFMFWIHDLSAKDPYY--------- 440

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541
                     + PIIM  +M IQ KM+P  AD  Q  I+  +PVVF F   SFP+GL++Y
Sbjct: 441 ----------VLPIIMGATMLIQQKMTPSTADPTQQKIMLLLPVVFTFLFLSFPSGLVLY 490

Query: 542 WSWSNVISIVQQAVIMKMHGA 562
           W  +N+  I QQ  I K    
Sbjct: 491 WLINNLFGIAQQFYINKKIKK 511


>gi|317051002|ref|YP_004112118.1| membrane protein insertase, YidC/Oxa1 family [Desulfurispirillum
           indicum S5]
 gi|316946086|gb|ADU65562.1| membrane protein insertase, YidC/Oxa1 family [Desulfurispirillum
           indicum S5]
          Length = 519

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 156/575 (27%), Positives = 247/575 (42%), Gaps = 74/575 (12%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFY----VYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M+      +AI LS I+++++Q F+      P   +    +    T++ P Q D   A  
Sbjct: 1   MDNK--MVLAIVLSAIVLFSYQIFFIEMDEPPLPVDGAPAKVAEPTLQAPAQNDAVPALP 58

Query: 57  LID------------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                          D++  +     V L+N  +I + +  G     L L+ +  D    
Sbjct: 59  ATQFSSSPSLDQGLSDQSLRIVDGRDVVLENDLIIATFSTSGGHLQSLRLKEHQED-GRG 117

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
             +V ++     +  Y A    ++T                          +       +
Sbjct: 118 GAMVEMI-----RAGYPAFTSVIATPTGNIDLAGLPFTVEQQTD-----NSVTFHTLLPD 167

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
                +  +L   Y F I   +          +    +               EG +   
Sbjct: 168 GRDVRKQYTLSGAYEFSIRYDME---CAPGACAAVTTLPVEIVANVKGDTFSFEGIVHGS 224

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
            D  L + KYSD+          +  + G+ DKY+   F+PS + +F         G A 
Sbjct: 225 ADAGLDKIKYSDVSA---VRDIRNIGYGGVMDKYFLIAFLPSPQDTFRLFPDIPQRGAAL 281

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
                            + T+  +FAG K    +  Y+           ID+G+   +A 
Sbjct: 282 V--------------SPLGTSVTVFAGPKLKGILDTYDV-----GLSQAIDYGFLSILAA 322

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+   + +FY+L GN+G+AI+L TV +K++FFPL+ K Y S   +  + P++ +L+EKFK
Sbjct: 323 PLMQAIRWFYSLTGNYGVAIILLTVCIKIIFFPLSHKSYKSMKKISVLAPELKKLKEKFK 382

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
              PQ L  A ++LYKTH  NPL+GC PIL+QIPVFFA+YK +  ++E+RHAPF  WI D
Sbjct: 383 N-DPQKLNTATMELYKTHKANPLSGCLPILVQIPVFFALYKTLMNAIELRHAPFALWIND 441

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+A DP                     I P+IM  +MF+Q KM+P   D  Q  I+  +P
Sbjct: 442 LSALDPYY-------------------ITPVIMGATMFLQQKMTPTAMDPLQRKIMLSLP 482

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +VF F   +FP+GLI+YW  +NV+SI QQ  I K 
Sbjct: 483 IVFTFLFMTFPSGLILYWIVNNVLSIAQQYYINKR 517


>gi|302035743|ref|YP_003796065.1| inner-membrane protein insertion factor OxaA [Candidatus Nitrospira
           defluvii]
 gi|300603807|emb|CBK40139.1| Inner-membrane protein insertion factor OxaA [Candidatus Nitrospira
           defluvii]
          Length = 580

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 143/591 (24%), Positives = 237/591 (40%), Gaps = 70/591 (11%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVY----PRIEEMNNERK----------------NI 40
           ME      V + +S+ ++  +          P  E +                     + 
Sbjct: 1   ME--KRVIVFLIVSLAVIIGYDYLLKGMGLLPPSEPVQVATNPSPAAETGKPGGGAGDSA 58

Query: 41  QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
           ++V        +       +   A S    VE+         + +GA      L+ Y   
Sbjct: 59  KSVSAAPVSSVNGVPASPGNATGAASEEQTVEVDTELFRAKFSNRGAVLKSWELKRYSAA 118

Query: 101 VSSNSPIVTLLSPSNTKNAYFAEL---DYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157
           V  +S  V L+          + +     V++     L       + +           +
Sbjct: 119 VEQSSTPVQLVYSGGRFKGPLSLVTGDQSVTSDLGSALYQVTQDLSHLDSAHPVGHLTFR 178

Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
                 N  + +        Y+  I                +G          TN   V+
Sbjct: 179 YHDSQKNVDVEKELTFHHGSYVVDIAIRT------------QGLTTPVDVTLGTNFGIVE 226

Query: 218 EG--FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275
            G  FI ++G  SLV+ K         +       W  I DKY+ SV +P K ++  +  
Sbjct: 227 WGEGFIGLMGSASLVDDKVLKETPDGEAERKGDVKWSAIQDKYFLSVLMPQKASA--ALA 284

Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD-LAIPRFEMLI 334
           K   D       +F+       P    T    L+AG KE+ T+            F   +
Sbjct: 285 KKEGDKLVSAGVRFAT------PVNGATMAMQLYAGPKEYDTLKRLNVGLEDTIDFGWFV 338

Query: 335 D--WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
              WG    +AKP+F ++ + Y    N+G+ I+L T+ +KL+F PL  K Y S   M+ I
Sbjct: 339 FGSWGLVKAVAKPIFYVLRFLYEFTHNYGVTIILLTMLIKLMFVPLQYKSYKSMKQMQVI 398

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QPK+  L+ KFK    + L K +I+LYK H +NP+ GC P++LQ+PVF A++ ++ ++++
Sbjct: 399 QPKVLALQTKFKD-DRERLNKELIKLYKDHRVNPVGGCLPMVLQMPVFVALFNILYMTID 457

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           +R APF  WIKDL+  DP                     + PI+M  +M IQ K++P   
Sbjct: 458 LRQAPFMLWIKDLSVQDPYY-------------------VLPIVMGATMVIQQKITPTTM 498

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           D  QA I+ ++PV   F   +FPAGL++YW  +N ++I QQ V  ++ G +
Sbjct: 499 DPTQAKIMLFLPVFMTFLFVNFPAGLVLYWLTNNTLTITQQVVTERLFGKK 549


>gi|327398260|ref|YP_004339129.1| Membrane protein oxaA [Hippea maritima DSM 10411]
 gi|327180889|gb|AEA33070.1| Membrane protein oxaA [Hippea maritima DSM 10411]
          Length = 522

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 136/568 (23%), Positives = 241/568 (42%), Gaps = 57/568 (10%)

Query: 1   MERN--WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+ N      +AI +  I++ A+  F++  +     N            Q      A   
Sbjct: 1   MKENNEKRILMAILVVTILITAYTYFFLPKQQPTPKNSNATKAKQVDHKQQLLQQTAKTT 60

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
             +   L     + ++  + I  I+       +L L+ Y +    N   V L+  S   N
Sbjct: 61  AKKQTDLKE-KLITVETDNYILKISSLNGSIKELTLKKYSI----NKANVELVKSSGYYN 115

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
                 +     +  E          +    L     + L   N N  + +     D  Y
Sbjct: 116 TLETVFENRQLEDMEENTPYKPNSYRVELSKLNKNFKLILKKSNDNYTIIKTFSFKDGDY 175

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
            F     V  N         + ++  +      +    +   +  +      +       
Sbjct: 176 AFDFNVRVLKN-----NQPVKAKLSVYAGPDLGDLQKAKYSHLGAVALVDNDKI-----R 225

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
                   E   W+ +  KY+   F+P    S  + +  L+DG+  Y             
Sbjct: 226 TDKKIKPDEDIHWIALESKYFCFAFLPQNSNSLLAGYTKLNDGNYVYV------------ 273

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
                    ++AG K   TI   +      + + +I +G F FI KP+  ++++ Y++ G
Sbjct: 274 NLESPAKLTIYAGPKSKETIAAVDH-----KLDKIIRFGMFGFIGKPLLYVLNWLYSIFG 328

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G+AI++ T  ++L+F+PL+ K + S   M  +QPK+ EL+ K+K  P Q L KA ++L
Sbjct: 329 NYGVAIIVLTFLIRLIFYPLSFKSFKSMKEMAKLQPKLKELQAKYKGKPDQ-LNKATMEL 387

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK H +NP  GC P+++QIPVFFA+Y V+  ++E+R APF  WI DL++ DP        
Sbjct: 388 YKKHKVNPFGGCLPVVIQIPVFFALYNVLLNAIELRGAPFMLWITDLSSKDPYY------ 441

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
                        + PI+M L+M++Q K++P   D  Q  I+ +MP++F F    FP+GL
Sbjct: 442 -------------VLPILMGLTMYVQQKLTPATGDPTQQKIMMFMPLIFTFMFMGFPSGL 488

Query: 539 IIYWSWSNVISIVQQAV---IMKMHGAE 563
           ++YW+ +N+++I QQ +   I+K    +
Sbjct: 489 VLYWATNNLLTIAQQFIDSQILKAQEKK 516


>gi|188579256|ref|YP_001916185.1| putative inner membrane protein translocase component YidC
           [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|254778173|sp|B2SUW0|OXAA_XANOP RecName: Full=Inner membrane protein oxaA
 gi|188523708|gb|ACD61653.1| 60 kDa inner-membrane protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 574

 Score =  289 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 127/606 (20%), Positives = 241/606 (39%), Gaps = 63/606 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M +   + +   L V  +  W  +    +           Q+V     +D +  +     
Sbjct: 1   MNQTRVFLIFAWLMVAALL-WMEW-GKEKAAANAPGAAATQSVPAARDLDAATPSAANVP 58

Query: 61  RAQALSMS----------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYH 98
            AQA+  +                      P V L +  L   ++  G    D  L  + 
Sbjct: 59  AAQAIPQAGAPGKVPATSTTTATPAAAGTAPVVTLTSDVLRLKLD--GRSVLDAELLQFP 116

Query: 99  LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTP 155
                 +P+  L    +  + Y A   + S  + +            +         T  
Sbjct: 117 QTKDGTAPVSLL--TEDAAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFELAKGQNTLV 174

Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214
           +  V+   N +   RT +L    Y   I D V N S          ++ R     +    
Sbjct: 175 VPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNGYVFRKLSRVPTILSRGMT 234

Query: 215 GV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270
                   G            + + D       N   +  W+ +   ++ + +IP  +  
Sbjct: 235 NPDSFSFNGATWYSPQAGYERRAFKDYMDDGGLNRQITGGWIALLQHHFFTAWIPQNDQ- 293

Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
             +    L+    R  A+      T+ PG++ TT   L+ G K    +   E    + R 
Sbjct: 294 --ASLYVLNKDGPRDVAELRGPAFTVAPGQTATTEARLWVGPKLVS-LIAKEDVKGLDRV 350

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
                +     I + +F ++S+ ++ + N+G AI+   V ++L+ +PL+  QY S+A M+
Sbjct: 351 IDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLVVLLRLVLYPLSSAQYKSSAKMR 410

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
             QP++ +L+E++     +  Q+A ++L+K   INP+ GC P+L+Q+P+FFA+Y V+  S
Sbjct: 411 KFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVES 469

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +E+R AP+ GWI+DL A DP                     I P +    M+   K++P 
Sbjct: 470 VELRQAPWLGWIQDLTARDPHF-------------------ILPALNIAIMWATQKLTPT 510

Query: 511 PA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           P  D  QA ++ +MP+VF   ++  P+GL++YW  +  ++++ Q  +++ HG +      
Sbjct: 511 PGIDPMQAKMMQFMPLVFGAMMAFVPSGLVLYWVVNGGLNLLIQWWMIRQHGEKPS--KI 568

Query: 570 LRSTFS 575
           +R+   
Sbjct: 569 IRANAK 574


>gi|58584259|ref|YP_203275.1| putative inner membrane protein translocase component YidC
           [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|166714253|ref|ZP_02245460.1| putative inner membrane protein translocase component YidC
           [Xanthomonas oryzae pv. oryzicola BLS256]
 gi|75508023|sp|Q5GTT3|OXAA_XANOR RecName: Full=Inner membrane protein oxaA
 gi|58428853|gb|AAW77890.1| 60 kDa inner-membrane protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 574

 Score =  289 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 127/606 (20%), Positives = 241/606 (39%), Gaps = 63/606 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M +   + +   L V  +  W  +    +           Q+V     +D +  +     
Sbjct: 1   MNQTRVFLIFAWLMVAALL-WMEW-GKEKAAANAPVAAATQSVPAARDLDAATPSAANVP 58

Query: 61  RAQALSMS----------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYH 98
            AQA+  +                      P V L +  L   ++  G    D  L  + 
Sbjct: 59  AAQAIPQAGAPGKVPATSTTTATPAAAGTAPVVTLTSDVLRLKLD--GRSVLDAELLQFP 116

Query: 99  LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTP 155
                 +P+  L    +  + Y A   + S  + +            +         T  
Sbjct: 117 QTKDGTAPVSLL--TEDAAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFELAKGQNTLV 174

Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214
           +  V+   N +   RT +L    Y   I D V N S          ++ R     +    
Sbjct: 175 VPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNGYVFRKLSRVPTILSRGMT 234

Query: 215 GV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270
                   G            + + D       N   +  W+ +   ++ + +IP  +  
Sbjct: 235 NPDSFSFNGATWYSPQAGYERRAFKDYMDDGGLNRQITGGWIALLQHHFFTAWIPQNDQ- 293

Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
             +    L+    R  A+      T+ PG++ TT   L+ G K    +   E    + R 
Sbjct: 294 --ASLYVLNKDGPRDVAELRGPAFTVAPGQTATTEARLWVGPKLVS-LIAKEDVKGLDRV 350

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
                +     I + +F ++S+ ++ + N+G AI+   V ++L+ +PL+  QY S+A M+
Sbjct: 351 IDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLVVLLRLVLYPLSSAQYKSSAKMR 410

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
             QP++ +L+E++     +  Q+A ++L+K   INP+ GC P+L+Q+P+FFA+Y V+  S
Sbjct: 411 KFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVES 469

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +E+R AP+ GWI+DL A DP                     I P +    M+   K++P 
Sbjct: 470 VELRQAPWLGWIQDLTARDPHF-------------------ILPALNIAIMWATQKLTPT 510

Query: 511 PA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           P  D  QA ++ +MP+VF   ++  P+GL++YW  +  ++++ Q  +++ HG +      
Sbjct: 511 PGIDPMQAKMMQFMPLVFGAMMAFVPSGLVLYWVVNGGLNLLIQWWMIRQHGEKPS--KI 568

Query: 570 LRSTFS 575
           +R+   
Sbjct: 569 IRANAK 574


>gi|94676570|ref|YP_588605.1| putative inner membrane protein translocase component YidC
           [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
 gi|94219720|gb|ABF13879.1| inner membrane protein oxaA [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 533

 Score =  289 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 137/575 (23%), Positives = 240/575 (41%), Gaps = 52/575 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    W+ +      +              P Q    Y       
Sbjct: 1   MDSQRNLLV-IALLFVSYIIWEIWQKEHFPQNNIQNTLIEIKDNLPQQNIPYY------- 52

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +K    + +IN  G   +   L  Y   + S+ P   L         Y
Sbjct: 53  -----KKGKHIIVKTDVFLLTINTSGGDIEQAYLLTYPTKLGSSKPFSLL--EKKPTFVY 105

Query: 121 FAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVFKNANNILFERTISLD-EH 177
            A+   +      +                       + L + + N I++ +T       
Sbjct: 106 LAQSGIIGKHGIDQKERPLYKAKHKQYFLNNNENILYVPLTYTSTNGIVYTKTFVFKRGE 165

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA------TNTFGVQEGFIAVLGDKSLVE 231
           +   +   + NNS   +     G+  +    +        +         A    K   +
Sbjct: 166 FAINVNYNIQNNSNKPLEIKLFGQFKQSFNSSEFSDIYRNSFSLQTYRGAAYSTTKYKYK 225

Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
           +      + +  N      W+ +  +Y+ + ++P  +   +     L +G       F +
Sbjct: 226 KYSFKDIQQTNLNVSSKKGWIAMLQQYFVTAWVPITQGYKNFYTTNLENGE--VAIGFQS 283

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
            E+ I P K       L+ G K    +   +     P  ++ +D+G  +FI+KP+F L+ 
Sbjct: 284 EEVNIAPHKQDNLNAILWLGPKIQDKMAEID-----PYLDLAVDYGLLWFISKPLFKLLK 338

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           + Y+++GN+G AI++ T  V+ L +PL K QY S A M  +QPK+  +RE+F  +P Q  
Sbjct: 339 FIYSIIGNWGFAIIIITFIVRGLMYPLTKAQYTSIAKMMILQPKLAVIRERFSDNP-QRQ 397

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
            + ++ LYK   INPL GC P+++Q+P+F A+Y ++S S+E+RHAPF  WI+DL+A DP 
Sbjct: 398 NQELMALYKAEKINPLGGCLPLIIQMPIFLALYYMLSGSIELRHAPFALWIQDLSAQDPY 457

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530
                               I PIIM ++M I  K+SP    D  Q  I+N+MP++F   
Sbjct: 458 Y-------------------ILPIIMGITMLIIQKISPTTITDPIQQKIMNFMPIIFTVF 498

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
              FP+GL++Y+  SN+ +I+QQ +I +    ++ 
Sbjct: 499 FLWFPSGLVLYYIVSNLFTIIQQELIYREFKKQVK 533


>gi|71891805|ref|YP_277534.1| hypothetical protein BPEN_012 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71795911|gb|AAZ40662.1| putative protein [Candidatus Blochmannia pennsylvanicus str. BPEN]
          Length = 638

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 142/574 (24%), Positives = 260/574 (45%), Gaps = 54/574 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N+FV   L +  +  WQ +      +   ++R NIQ +           +   D 
Sbjct: 89  MDSQRNFFVIAFLIMSFIL-WQIW------QTEYHQRTNIQKINIHENTYPLIRSEDNDA 141

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                  +  + +K   L+  IN  G   ++  L  Y  ++ S  P   L   ++    Y
Sbjct: 142 IKYVHHTNHVITVKTDVLLLKINTYGGDIEEAYLVNYLENLHSKEPFHLL--STSQAFTY 199

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGK------ILTPTTPIKLVFKNANNILFERTISL 174
                 ++        N   ++   + K             + L    ++ I + +    
Sbjct: 200 QTNSGLITENIPGRSYNKKFIYTTATDKSLYIIPKNENKLQLTLTHYASDGITYTKNYIF 259

Query: 175 DEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN---------TFGVQEGFIAVL 224
             +     +  TV N S   ++    G I++ +    ++               G     
Sbjct: 260 HRNDYSIYVFYTVNNMSTYPLKIKLFGNIVQSEHYPKSHNNSDNGDNFPLYSYRGSAYST 319

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
             K   +  + DI+  ++   + S  W+ +S KY+A+ +IP  + +      Y ++  A 
Sbjct: 320 DKKKYQKYSFKDIKNMNLK-INTSKGWIAMSQKYFATAWIPLTQGNNTFYTTYHNNNSA- 377

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
               F +N I +  G++ T  + L+ G K    +         P  ++L+D+GW +FI++
Sbjct: 378 -SIGFQSNSIDLPIGETGTFQSILWIGPKIQEKMKAIA-----PNLDLLVDYGWLWFISQ 431

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L+S+ Y+ + N+GI+I++ T+ ++L+ +PL K QY S A ++ +QPK+  ++E++K
Sbjct: 432 PLFKLLSFIYSYIENWGISIIIITLIIRLIMYPLTKAQYTSMAKIRMLQPKLSIIQEEYK 491

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               Q   +  I+LYK   +NPL GC P+L+Q+P+F A+Y ++S S+E+RHA F  WI D
Sbjct: 492 HDKYQ-YHQKTIELYKLEKVNPLGGCLPLLIQMPIFLALYYMLSGSVELRHAAFAFWIHD 550

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523
           L+A DP                     I PI+M ++MF   KMSP    D  Q  ++  M
Sbjct: 551 LSAQDPYY-------------------ILPILMGITMFFIQKMSPTTITDAIQKKMMTIM 591

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            ++F      FP+GL++Y+  SN+I+I+QQ +I 
Sbjct: 592 LIIFTIFFLWFPSGLVLYYIASNIITIIQQYMIY 625


>gi|84626027|ref|YP_453399.1| putative inner membrane protein translocase component YidC
           [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|123520412|sp|Q2NX52|OXAA_XANOM RecName: Full=Inner membrane protein oxaA
 gi|84369967|dbj|BAE71125.1| 60 kDa inner-membrane protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 578

 Score =  283 bits (723), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 126/610 (20%), Positives = 241/610 (39%), Gaps = 67/610 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M +   + +   L V  +  W  +    +           Q+V     +D +  +     
Sbjct: 1   MNQTRVFLIFAWLMVAALL-WMEW-GKEKAAANAPGAAATQSVPAARDLDAATPSAANVP 58

Query: 61  RAQALSMS--------------------------PRVELKNPSLIGSINLKGAQFDDLNL 94
            AQ ++ +                          P V L +  L   ++  G    D  L
Sbjct: 59  AAQPIAQAGAPGTVPATSTTTATATATPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAEL 116

Query: 95  RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILT 151
             +       +P+  L    +  + Y A   + S  + +            +        
Sbjct: 117 LQFPQTKDGTAPVSLL--TEDAAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFELAKGQ 174

Query: 152 PTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210
            T  +  V+   N +   RT +L    Y   I D V N S          ++ R     +
Sbjct: 175 NTLVVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNGYVFRKLSRVPTILS 234

Query: 211 TNTFGV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266
                       G            + + D       N   +  W+ +   ++ + +IP 
Sbjct: 235 RGMTNPDSFSFNGATWYSPQAGYERRAFKDYMDDGGLNRQITGGWIALLQHHFFTAWIPQ 294

Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326
            +    +    L+    R  A+      T+ PG++ TT   L+ G K    +   E    
Sbjct: 295 NDQ---ASLYVLNKDGPRDVAELRGPAFTVAPGQTATTEARLWVGPKLVS-LIAKEDVKG 350

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
           + R      +     I + +F ++S+ ++ + N+G AI+   V ++L+ +PL+  QY S+
Sbjct: 351 LDRVIDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLVVLLRLVLYPLSSAQYKSS 410

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
           A M+  QP++ +L+E++     +  Q+A ++L+K   INP+ GC P+L+Q+P+FFA+Y V
Sbjct: 411 AKMRKFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWV 469

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
           +  S+E+R AP+ GWI+DL A DP                     I P +    M+   K
Sbjct: 470 LVESVELRQAPWLGWIQDLTARDPHF-------------------ILPALNIAIMWATQK 510

Query: 507 MSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           ++P P  D  QA ++ +MP+VF   ++  P+GL++YW  +  ++++ Q  +++ HG +  
Sbjct: 511 LTPTPGIDPMQAKMMQFMPLVFGAMMAFVPSGLVLYWVVNGGLNLLIQWWMIRQHGEKPS 570

Query: 566 LIDRLRSTFS 575
               +R+   
Sbjct: 571 --KIIRANAK 578


>gi|167717468|ref|ZP_02400704.1| putative inner membrane protein translocase component YidC
           [Burkholderia pseudomallei DM98]
          Length = 454

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 135/472 (28%), Positives = 211/472 (44%), Gaps = 41/472 (8%)

Query: 100 DVSSNSPIVTL---LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156
             + +     L   L      + Y A    +      + PN N V+  ++G         
Sbjct: 5   TKAGDGKQPDLSVTLFDHTANHTYLARTGLL----GGDFPNHNDVYAQVAGPTSLAADQN 60

Query: 157 KLVFKN-----ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
            L             + +        Y+  +   + N     +  S    ++R      T
Sbjct: 61  TLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVET 120

Query: 212 NTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKET 269
             F     G       K   +  + DI+K+         N W+ +   Y+AS +IP    
Sbjct: 121 PMFSHTFLGPAVYTDQKHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGA 180

Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329
                          Y+         I PG+S   +  LFAG +E   +         P 
Sbjct: 181 --KRDIYVEKIDPTLYRVGVKQPVAAIAPGQSADVSARLFAGPEEERMLEGIA-----PG 233

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            E++ D+GW   IAKP+F L+   +  VGN+G AI+L T+ +K +FFPL+   Y S A M
Sbjct: 234 LELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARM 293

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           K I P++  LRE+F +S PQ +  A+++LYKT  +NP  GC P+++QIPVF ++Y V+  
Sbjct: 294 KEITPRMQALRERF-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLA 352

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S+EMR AP+  WI DL+  DP                     I P++M++SMF+Q K++P
Sbjct: 353 SVEMRGAPWVLWIHDLSQRDPYF-------------------ILPVLMAVSMFVQTKLNP 393

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            P D  QA ++ +MP+ F      FPAGL++Y+  +NV+SI QQ  I +  G
Sbjct: 394 TPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 445


>gi|319760162|ref|YP_004124100.1| inner membrane protein [Candidatus Blochmannia vafer str. BVAF]
 gi|318038876|gb|ADV33426.1| inner membrane protein [Candidatus Blochmannia vafer str. BVAF]
          Length = 650

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 147/585 (25%), Positives = 266/585 (45%), Gaps = 47/585 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYV--YPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N+F+ I L +  +  WQ + +  Y +   +NN + N       +++ +S     I
Sbjct: 89  MDSQRNFFIGIFLIISFIL-WQTWEIEHYYQKTHLNNLKDNYTNSYLNSKISSSTPPNNI 147

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                       + ++    +  IN  G   +D  L  Y  +++S  P+  L S    + 
Sbjct: 148 QKNIVHSENKDIITVQTDVFLLKINKYGGNIEDAYLLKYLDNLNSQQPLRLLNSSKKYQY 207

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKI------LTPTTPIKLVFKNANNILFERTI 172
             ++EL   +  +N E      ++  I+ +          T    L+  + N I++ +  
Sbjct: 208 QTYSELTTNTNLSNEENQCKKFLYTDINNQNKYILKNNKNTLQFTLMHYDPNGIIYTKQY 267

Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH---------KPQTATNTFGVQEGFIA 222
                +Y   I  T+ N SI  I     G +++            +         EG   
Sbjct: 268 LFHRNNYFITINHTIDNTSIHSIYTRILGNLVQSQYYLPIPLKNNKNKIYLSSEYEGSAY 327

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
               +   +  ++D++ ++++  H    W+ +  KY+   ++P    +      Y+ D  
Sbjct: 328 STNKEKYQKYSFNDMKHNNLN-IHSIGGWVALLQKYFVVAWLPITPVNNVFHTTYIDD-- 384

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
                 F ++ I I PG+       L+ G K    I    K    P   ++ID+GWF+FI
Sbjct: 385 HYMSIGFQSDLIQIPPGQKKEFQTILWIGPKIQDHI----KSTIAPNLNLVIDYGWFWFI 440

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           ++P+F L+   +N + N+G++I+L T+ ++++ +PL K QY S A M+ +QPK+  ++EK
Sbjct: 441 SQPLFKLLQLIHNYINNWGVSIILITIIIRIIMYPLTKAQYTSMAKMRMLQPKLVLIQEK 500

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +K +  Q   +  I+LYK   +NPL GC P+L+Q+P+F A+Y ++S S+E+RHA F  WI
Sbjct: 501 YKHNKYQ-CHQKTIELYKKEKVNPLGGCLPLLIQMPIFLALYYMLSNSVELRHAKFMLWI 559

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521
            DL+  DP                     I PIIM ++M +  K++P    D  Q  I+ 
Sbjct: 560 NDLSTQDPYY-------------------ILPIIMGITMLLIQKLAPTTITDPTQKKIMT 600

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
            M   F      FP+GL++Y+  SNVI+I+QQ +I      +  +
Sbjct: 601 IMLTAFTVFFLWFPSGLVLYYIISNVITIIQQHIIYHGLSKKNNM 645


>gi|1369897|dbj|BAA12844.1| inner membrane protein [Buchnera aphidicola]
 gi|2827010|gb|AAC38102.1| 60-kDa protein [Buchnera aphidicola]
          Length = 536

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 124/571 (21%), Positives = 237/571 (41%), Gaps = 60/571 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N+F+   L  +    WQ +      +   NE  N                     
Sbjct: 1   MELQRNFFIFAFL-FVSFLLWQAWQSQSLKKNKKNEETNS-----------------FFH 42

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                    ++ +KN  L   IN+ G   ++ +L  Y   ++S   +  L   + +   Y
Sbjct: 43  LNHKKEDKNQIIIKNDVLRLVINMYGGDIEEASLLDYKTQLNSPENLKLL--ETKSDFVY 100

Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFK-----NANNILFERTISL 174
            A+   +     +  +     +++             +L               +  I  
Sbjct: 101 QAQSGLIGKDGLDNSINKIRPLYSAKKNFFELGHNEKELRVPITFIAKNGITYIKNFILK 160

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227
              Y  ++   + N S  ++  +  G++ +           +         G      D 
Sbjct: 161 PGKYNVEVEYDINNLSNKKLELNIFGQLKQTVKLPKNRDIYSGNFALQTFRGAAYSSSDA 220

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE-TSFHSQFKYLSDGHARYQ 286
              + K+ +I      +    + W+ +  +Y+   ++P    +S +  +    D      
Sbjct: 221 KYEKYKFDNIANHEHLHIITHHGWIAMLQQYFVVAWVPDTNISSSNIIYTSYLDNDGIAI 280

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
             + ++ I I         + L+ G ++   +         P  ++ +D+G+ +F+++P+
Sbjct: 281 IGYKSSLINIPSNSRYIIKSKLWIGPEKQQEMALVA-----PNLDLTVDYGFLWFLSQPL 335

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+S  +N +GN+G +I+L T  +K + +P+ K QY S + M+ +QPKI+EL+ K    
Sbjct: 336 FKLLSTIHNFIGNWGFSIILITFMMKAITYPVTKAQYTSMSKMRELQPKINELK-KNFGH 394

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q + K ++ LYK   INPL GC P+ +Q+P+F ++Y ++  S+E+RHAPF  WIKDL+
Sbjct: 395 DKQRMSKEIMALYKKEKINPLGGCLPVFIQMPIFLSLYYMLIGSVELRHAPFLFWIKDLS 454

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
             DP                     + PI M L+MF   + S    +D  Q  I+++MP 
Sbjct: 455 DQDPYY-------------------VLPIFMGLTMFFIQRTSSNNISDPFQQKIMHFMPF 495

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F      FP+GL++Y+  SN+++I+QQ  I
Sbjct: 496 IFTVFFLWFPSGLVLYYIVSNLVTIIQQKYI 526


>gi|22654213|sp|P29431|OXAA_BUCAP RecName: Full=Membrane protein oxaA
          Length = 536

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 125/571 (21%), Positives = 237/571 (41%), Gaps = 60/571 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N+F+   L  +    WQ +      +   NE  N                     
Sbjct: 1   MELQRNFFIFAFL-FVSFLLWQAWQSQSLKKNKKNEETNS-----------------FFH 42

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                    ++ +KN  L   IN+ G   ++ +L  Y   ++S   +  L   + +   Y
Sbjct: 43  LNHKKEDKNQIIIKNDVLRLVINMYGGDIEEASLLDYKTQLNSPENLKLL--ETKSDFVY 100

Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFK-----NANNILFERTISL 174
            A+   +     +  +     +++             +L               +  I  
Sbjct: 101 QAQSGLIGKDGLDNSINKIRPLYSAKKNFFELGHNEKELRVPITFIAKNGITYIKNFILK 160

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227
              Y  ++   + N S  ++  +  G++ +           +         G      D 
Sbjct: 161 PGKYNVEVEYDINNLSNKKLELNIFGQLKQTVKLPKNRDIYSGNFALQTFRGAAYSSSDA 220

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE-TSFHSQFKYLSDGHARYQ 286
              + K+ +I      +    + W+ +  +Y+   ++P    +S +  +    D      
Sbjct: 221 KYEKYKFDNIANHEHLHIITHHGWIAMLQQYFVVAWVPDTNISSSNIIYTSYLDNDGIAI 280

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
             + ++ I I         + L+ G ++   +         P  ++ +D+G+ +F+++P+
Sbjct: 281 IGYKSSLINIPSNSRYIIKSKLWIGPEKQQEMALVA-----PNLDLTVDYGFLWFLSQPL 335

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+S  +N +GN+G +I+L T  +K + +PL K QY S + M+ +QPKI+EL+ K    
Sbjct: 336 FKLLSTIHNFIGNWGFSIILITFMMKAITYPLTKAQYTSMSKMRELQPKINELK-KNFGH 394

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q + K ++ LYK   INPL GC P+ +Q+P+F ++Y ++  S+E+RHAPF  WIKDL+
Sbjct: 395 DKQRMSKEIMALYKKEKINPLGGCLPVFIQMPIFLSLYYMLIGSVELRHAPFLFWIKDLS 454

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
             DP                     + PI M L+MF   + S    +D  Q  I+++MP 
Sbjct: 455 DQDPYY-------------------VLPIFMGLTMFFIQRTSSNNISDPFQQKIMHFMPF 495

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F      FP+GL++Y+  SN+++I+QQ  I
Sbjct: 496 IFTVFFLWFPSGLVLYYIVSNLVTIIQQKYI 526


>gi|328952575|ref|YP_004369909.1| Membrane protein oxaA [Desulfobacca acetoxidans DSM 11109]
 gi|328452899|gb|AEB08728.1| Membrane protein oxaA [Desulfobacca acetoxidans DSM 11109]
          Length = 566

 Score =  281 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 130/601 (21%), Positives = 224/601 (37%), Gaps = 75/601 (12%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYV--YPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           ME      +A+ +S +I   +       YP   +    +   Q V+QP     + +   +
Sbjct: 1   ME--KRALLALVISFVIFIGFGYIQQKFYPPSPQKPATQPVEQPVEQPAAPKPAISPSPV 58

Query: 59  DDRAQA------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY--------------- 97
                       +  +  + +  P        +GA+     L+ Y               
Sbjct: 59  ATPTTPSTPPTGVQKARDIVVDTPLYQAIFTEQGARLKSFRLKKYWGHLPFQKIADFNLW 118

Query: 98  ---------HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK 148
                        +  +    L+  +       A       A+             IS  
Sbjct: 119 FFGIDIQRYKRVGNQITDPKELVQATTPDALPLALAWETKAASVGAAEVYQADQKAISLT 178

Query: 149 ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208
                       +     L +        Y   +  TV N S + +       +     +
Sbjct: 179 DQDKAKLSFTCVRPNGLTLVKTFTFEQNSYRLDLTATVKNQSSNPLEGDLALSLTDDFSE 238

Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268
                F                 +          S       W  +   Y+    +P   
Sbjct: 239 VKDAGFTGFAWSA-------KKSRDTVASGSLKESKMIGQLDWGSLESSYFMMAVVPP-P 290

Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328
           + F               A F     ++ PG+ I+    L+ G K+   +          
Sbjct: 291 SDFKFTATVQDVASKIMTATFRTQVASLPPGQEISLPYTLYFGPKDLDILKSLGL----- 345

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
             E  +D+GWF  +A P+  ++ +F+  + N+G AI++ T  +++LF     K Y S  +
Sbjct: 346 GLEQTVDFGWFQILALPLLYVLQFFFKYLHNYGWAIIVMTFLIRVLFLYPNHKSYQSMKD 405

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QPKI +LREK+K    + L K ++ LY+T+ +NP+ GC P++LQ+PVF A+Y ++ 
Sbjct: 406 MQKLQPKIAKLREKYKD-DREALNKELMGLYRTYKVNPMGGCLPMILQLPVFIALYNILG 464

Query: 449 ISLEMRHAPFW--------GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            ++E+RHAPF          W+ DL+A DP                   + I PIIM  +
Sbjct: 465 YAIELRHAPFISTLPFTDIVWLADLSAKDP-------------------LLITPIIMGAT 505

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
           MFIQ KM+P P D  QA ++  MP++F F   +F +GL++YW  +NV+SI+QQ    K  
Sbjct: 506 MFIQQKMTPSPGDPTQAKLMLMMPIIFTFMFLNFASGLVLYWLLNNVLSIIQQYYTNKYM 565

Query: 561 G 561
            
Sbjct: 566 P 566


>gi|15839369|ref|NP_300057.1| putative inner membrane protein translocase component YidC [Xylella
           fastidiosa 9a5c]
 gi|38503220|sp|Q9P9U1|OXAA_XYLFA RecName: Full=Inner membrane protein oxaA
 gi|9108026|gb|AAF85565.1|AE004083_4 60kDa inner-membrane protein [Xylella fastidiosa 9a5c]
          Length = 565

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 123/593 (20%), Positives = 231/593 (38%), Gaps = 50/593 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-------PNQVDNSY 53
           M +     +   L+V  +  W ++          +  +N+            P     + 
Sbjct: 1   MNQTRVLLIFSWLTVATLL-WMDWGKNKNETLEISASQNLGVDSNLELEHAVPQINAGAV 59

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
                          P + +K   L   ++  G      +L  +       +  + LL+ 
Sbjct: 60  PVQKDSQLIAVAPKVPVINVKTDVLQLKLD--GFSVLAADLLRFPQSKDRGAKPIKLLTD 117

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFE 169
                 Y A   +VS +N+     S  +               +LV    +  AN +   
Sbjct: 118 DPNY-PYSATTGWVSQSNSPVPNLSTFLPEQPGVSYKLANDQDRLVVPFVWTAANGVSIR 176

Query: 170 RTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV------QEGFIA 222
           RT +     Y   I D + N            ++ R       N            G + 
Sbjct: 177 RTFTFERGRYAILIRDEIRNGGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFSFNGAVW 236

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                    + + D       N      W+ +   ++ + +IP K+    +    L+   
Sbjct: 237 YSEKGGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQ---ASLYLLAQNG 293

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
           +R  A+      T+ PG+S TT   L+ G K    I        + R      +     I
Sbjct: 294 SRDIAELRGPAFTVAPGQSTTTEARLWVGPKLVEQITKEHVK-GLDRVVDYSRFQLMALI 352

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            + +F ++S+  +L+ N+G AI+   V +++  +PL+  QY S A M+  QP++ +L+E+
Sbjct: 353 GQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSAAQYKSAAKMRKFQPRLQQLKER 412

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +     Q  Q+AM++LYK   INP+ GC+PIL+Q+P+FFA+Y V+  S+E+R AP+ GWI
Sbjct: 413 Y-GEDRQKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWLGWI 471

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMIL 520
           +DL   DP                     I P++  + M+   K++P P   D     ++
Sbjct: 472 QDLTTRDPYF-------------------ILPLLNIVIMWATQKLTPTPAGMDPIAGKMM 512

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA--EIGLIDRLR 571
             MP++F   ++  P+GL +YW  +  ++++ Q  +++ H           ++
Sbjct: 513 QVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIRQHADFSRKRSRGNIK 565


>gi|21672310|ref|NP_660377.1| inner membrane protein [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|21622909|gb|AAM67588.1| inner membrane protein [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 537

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 125/571 (21%), Positives = 237/571 (41%), Gaps = 60/571 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N+F+   L  +    WQ +      +   NE  N                     
Sbjct: 2   MELQRNFFIFAFL-FVSFLLWQAWQSQSLKKNKKNEETNS-----------------FFH 43

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                    ++ +KN  L   IN+ G   ++ +L  Y   ++S   +  L   + +   Y
Sbjct: 44  LNHKKEDKNQIIIKNDVLRLVINMYGGDIEEASLLDYKTQLNSPENLKLL--ETKSDFVY 101

Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFK-----NANNILFERTISL 174
            A+   +     +  +     +++             +L               +  I  
Sbjct: 102 QAQSGLIGKDGLDNSINKIRPLYSAKKNFFELGHNEKELRVPITFIAKNGITYIKNFILK 161

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227
              Y  ++   + N S  ++  +  G++ +           +         G      D 
Sbjct: 162 PGKYNVEVEYDINNLSNKKLELNIFGQLKQTVKLPKNRDIYSGNFALQTFRGAAYSSSDA 221

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE-TSFHSQFKYLSDGHARYQ 286
              + K+ +I      +    + W+ +  +Y+   ++P    +S +  +    D      
Sbjct: 222 KYEKYKFDNIANHEHLHIITHHGWIAMLQQYFVVAWVPDTNISSSNIIYTSYLDNDGIAI 281

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
             + ++ I I         + L+ G ++   +         P  ++ +D+G+ +F+++P+
Sbjct: 282 IGYKSSLINIPSNSRYIIKSKLWIGPEKQQEMALVA-----PNLDLTVDYGFLWFLSQPL 336

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F L+S  +N +GN+G +I+L T  +K + +PL K QY S + M+ +QPKI+EL+ K    
Sbjct: 337 FKLLSTIHNFIGNWGFSIILITFMMKAITYPLTKAQYTSMSKMRELQPKINELK-KNFGH 395

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             Q + K ++ LYK   INPL GC P+ +Q+P+F ++Y ++  S+E+RHAPF  WIKDL+
Sbjct: 396 DKQRMSKEIMALYKKEKINPLGGCLPVFIQMPIFLSLYYMLIGSVELRHAPFLFWIKDLS 455

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
             DP                     + PI M L+MF   + S    +D  Q  I+++MP 
Sbjct: 456 DQDPYY-------------------VLPIFMGLTMFFIQRTSSNNISDPFQQKIMHFMPF 496

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F      FP+GL++Y+  SN+++I+QQ  I
Sbjct: 497 IFTVFFLWFPSGLVLYYIVSNLVTIIQQKYI 527


>gi|71901965|ref|ZP_00684016.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1]
 gi|71728270|gb|EAO30450.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1]
          Length = 565

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 123/593 (20%), Positives = 232/593 (39%), Gaps = 50/593 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-------PNQVDNSY 53
           M +     +   L+V  +  W ++          +   N+            P     + 
Sbjct: 1   MNQTRVLLIFSWLTVATLL-WMDWGKNKNETLEISASHNLGVDSNLELEHAVPQINAGAV 59

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
                     A    P + +    L   ++  G      +L  +       +  + LL+ 
Sbjct: 60  PLQKDSQLIAAAPKVPVINVTTDVLQLKLD--GFSILAADLLRFPQSKDRGAKPIKLLTD 117

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFE 169
                 Y A   +VS +N+     S  +               +LV    +  AN +   
Sbjct: 118 DPNY-PYSATTGWVSQSNSPVPNLSTFLPEQPDVSYKLANDQNRLVVPFVWTAANGVSIR 176

Query: 170 RTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV------QEGFIA 222
           RT +     Y   I D + N+           ++ R       N            G + 
Sbjct: 177 RTFTFERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFSFNGAVW 236

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                    + + D       N      W+ +   ++ + +IP K+    +    L+   
Sbjct: 237 YSEKGGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQ---ASLYLLAQNG 293

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
           +R  A+      T+ PG+S TT   L+ G K    I        + R      +     I
Sbjct: 294 SRDIAELRGPAFTVAPGQSTTTEARLWVGPKLVEQITKEHVK-GLDRVVDYSRFQLMALI 352

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            + +F ++S+  +L+ N+G AI+   V +++  +PL+  QY S A M+  QP++ +L+E+
Sbjct: 353 GQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSAAQYKSAAKMRKFQPRLQQLKER 412

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +     Q  Q+AM++LYK   INP+ GC+PIL+Q+P+FFA+Y V+  S+E+R AP+ GWI
Sbjct: 413 Y-GEDRQKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWLGWI 471

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMIL 520
           +DL   DP                     I P++  + M+   K++P P   D     ++
Sbjct: 472 QDLTTRDPYF-------------------ILPLLNIVIMWATQKLTPTPAGMDPIAGKMM 512

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA--EIGLIDRLR 571
             MP++F   ++  P+GL +YW  +  ++++ Q  +++ H         + ++
Sbjct: 513 QVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIRQHADFSRKRSRENIK 565


>gi|28199977|ref|NP_780291.1| putative inner membrane protein translocase component YidC [Xylella
           fastidiosa Temecula1]
 gi|182682731|ref|YP_001830891.1| putative inner membrane protein translocase component YidC [Xylella
           fastidiosa M23]
 gi|38502965|sp|Q879S3|OXAA_XYLFT RecName: Full=Inner membrane protein oxaA
 gi|254778174|sp|B2IAR7|OXAA_XYLF2 RecName: Full=Inner membrane protein oxaA
 gi|28058108|gb|AAO29940.1| 60 kDa inner-membrane protein [Xylella fastidiosa Temecula1]
 gi|182632841|gb|ACB93617.1| 60 kDa inner membrane insertion protein [Xylella fastidiosa M23]
          Length = 565

 Score =  279 bits (714), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 121/593 (20%), Positives = 232/593 (39%), Gaps = 50/593 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-------PNQVDNSY 53
           M +     +   L+V  +  W ++          +   N+            P     + 
Sbjct: 1   MNQTRVLLIFSWLTVATLL-WMDWSKNKNETLEISASHNLGVDSNLELEHAVPQIHAGAV 59

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
                     A    P + +    L   ++  G      +L  +       +  + LL+ 
Sbjct: 60  PLQKDSQLIAAAPKVPVINVTTDVLQLKLD--GFSILAADLLRFPQSKDRGAKPIKLLTD 117

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANNILFE 169
                 Y A   +VS +N+     S  +               +L    ++  AN +   
Sbjct: 118 DPNY-PYSATTGWVSQSNSPVPNLSTFLPEQPDVSYKLANDQNRLVVPFIWTAANGVSIR 176

Query: 170 RTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV------QEGFIA 222
           RT +     Y   I D + N+           ++ R       N            G + 
Sbjct: 177 RTFTFERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFSFNGAVW 236

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                    + + D       N      W+ +   ++ + +IP K+    +    L+   
Sbjct: 237 YSEKGGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQ---ASLYLLAQNG 293

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
           +R  A+      T+ PG++ TT   L+ G K    I        + R      +     I
Sbjct: 294 SRDIAELRGPAFTVAPGQTTTTEARLWVGPKLVEQITKEHVK-GLDRVVDYSRFQLMALI 352

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            + +F ++S+  +L+ N+G AI+   V +++  +PL+  QY S A M+  QP++ +L+E+
Sbjct: 353 GQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSASQYKSAAKMRKFQPRLQQLKER 412

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +     Q  Q+AM++LYK   INP+ GC+PIL+Q+P+FFA+Y V+  S+E+R AP+ GWI
Sbjct: 413 Y-GEDRQKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWLGWI 471

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMIL 520
           +DL   DP                     I P++  + M+   K++P P   D     ++
Sbjct: 472 QDLTTRDPYF-------------------ILPLLNIVIMWATQKLTPTPAGMDPIAGKMM 512

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA--EIGLIDRLR 571
             MP++F   ++  P+GL +YW  +  ++++ Q  +++ H         + ++
Sbjct: 513 QVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIRQHADFSRKRSRENIK 565


>gi|291285982|ref|YP_003502798.1| membrane protein insertase, YidC/Oxa1 family [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290883142|gb|ADD66842.1| membrane protein insertase, YidC/Oxa1 family [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 509

 Score =  279 bits (713), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 150/561 (26%), Positives = 243/561 (43%), Gaps = 60/561 (10%)

Query: 4   NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
           N N  +AI LS +++ A+Q F+  P+    N  +++ QT     Q+     A  I    Q
Sbjct: 2   NKNTVLAIGLSALVILAFQVFFA-PKPTVQNQVQQSAQTEDNKGQIVPVEDAQPITIEEQ 60

Query: 64  ALSMSPRV----ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
                P +    ++   ++    N       +  +  YH        +  +   S   + 
Sbjct: 61  TAQTEPMILETFDVLTDNVRYVFNANTGNIREAVINSYHSR-----DLTNVGFKSVNGDV 115

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
            FA++ ++S                   +    TT +       + ++ ++ +  D+ YL
Sbjct: 116 VFADVPFISA-------------YTSDVQKTNGTTTVTFSGSQGDIVVTKKYVINDDSYL 162

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
            K    + N     +       I  +      +     +G +   G +   E      EK
Sbjct: 163 VKGELVLNNTGDRTVNVPLTSGIGANAVDGFESDRYSFQGPLMFDGKRLKKE----KAEK 218

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
              S   +   W+G   KY+                K              + ++ + P 
Sbjct: 219 VDKSIVVDHPKWVGYMSKYFMIGV-------AQDYSKGTISPAGGSAKITGSADMKLNPD 271

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359
              T    LFAG KE+  +  Y+      + E  ID+G F FIA PM   +   Y+ V N
Sbjct: 272 ARETVEFSLFAGPKEYDLLKSYDL-----KLEKSIDFGIFSFIAIPMLKFLKIIYSYVHN 326

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +G+AI+L T+ +K+L FPL +K  VS   M ++QPK+ E++EKFK    +    A ++LY
Sbjct: 327 YGVAIILLTLVIKILTFPLTQKSMVSMKKMSSLQPKMLEIKEKFKGDKEK-TNAATMELY 385

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           K   +NPL GC P++LQIP+FFA+YK + +++E++ APF  WI DL+  DP  I      
Sbjct: 386 KNEGVNPLGGCLPMVLQIPIFFALYKTLLLAIELQGAPFMLWITDLSLKDPYYIS----- 440

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSFPAGL 538
                         PI+M  SMF+Q KM+P    D  Q  I  +MP++F F   +FPAGL
Sbjct: 441 --------------PILMGASMFLQQKMTPSTAQDPLQQKIFTFMPLIFTFLFLTFPAGL 486

Query: 539 IIYWSWSNVISIVQQAVIMKM 559
           ++YW  +NV+SI QQ  I K 
Sbjct: 487 VVYWLTNNVLSIAQQYFINKK 507


>gi|255321601|ref|ZP_05362759.1| inner membrane protein OxaA [Campylobacter showae RM3277]
 gi|255301457|gb|EET80716.1| inner membrane protein OxaA [Campylobacter showae RM3277]
          Length = 520

 Score =  277 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 124/561 (22%), Positives = 227/561 (40%), Gaps = 60/561 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M       +A  LS I   A+  F++   +    N+   +Q   Q N   ++  A     
Sbjct: 5   MSVQKRVLLATVLSFIFFIAYDYFFIPKNLPTDQNQTVAVQQSSQANAAPSANTASATGA 64

Query: 61  RAQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
                + S  +  +K       I+  G +     L       +         +      A
Sbjct: 65  PQAVTTQSREIAVIKGEHFEARIDELG-RISKFYLNDEKYKNAEG-------NRIELAGA 116

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHY 178
               L+   +   +        +    G+I   + P  +V           + I+   + 
Sbjct: 117 QPLPLEVRFSDKALNEQAFKVAYTSDVGEINLASEPKSIVLTQNLEGSSVTKKITFYPNG 176

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
            + +  +V+                  +P  A +++ V    +         +    +  
Sbjct: 177 SYDLDLSVS--------AGEYYVTPGFRPSVAIDSYTVHGALLKHNDG----KLTIIEDG 224

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
               +    + +    SD+Y+ ++F            K  +     +             
Sbjct: 225 DVDATESFNNVNIAAASDRYYTALFFKFDGLLNPVVSKDGAGNAVIFVKG---------- 274

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
                     + GAK+  T+    ++        +I++GWF FIAKPMF  +++ Y  +G
Sbjct: 275 --EQNFKAKGYIGAKDHATLSQINEE-----LVDVIEYGWFTFIAKPMFAFLNWLYGYIG 327

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G AI++ T+ V++       K  +S   +K++ PK+ EL+ K+K   PQ L   M++L
Sbjct: 328 NWGWAIVVLTLTVRIALSWFTYKGMLSMNKLKDLAPKVKELQAKYKG-DPQKLNMHMMEL 386

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK +  NP+ GC PIL+QIP+FFAIY+V+  ++E++ AP+  WI DL+  DP        
Sbjct: 387 YKKNGANPMGGCLPILMQIPIFFAIYRVLLNAIELKAAPWILWIHDLSVMDPYF------ 440

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537
                        + PI+M  +MF+Q K++P   +D  Q  I+ ++P++F F   +FPAG
Sbjct: 441 -------------VLPILMGATMFLQQKLTPTTFSDPMQEKIMKFLPLIFTFFFVTFPAG 487

Query: 538 LIIYWSWSNVISIVQQAVIMK 558
           L +YW  +NV S++QQ  + K
Sbjct: 488 LTLYWFVNNVCSVIQQVFVNK 508


>gi|71275537|ref|ZP_00651823.1| 60 kDa inner membrane protein [Xylella fastidiosa Dixon]
 gi|71900184|ref|ZP_00682324.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1]
 gi|170731353|ref|YP_001776786.1| putative inner membrane protein translocase component YidC [Xylella
           fastidiosa M12]
 gi|254778175|sp|B0U6I1|OXAA_XYLFM RecName: Full=Inner membrane protein oxaA
 gi|71163837|gb|EAO13553.1| 60 kDa inner membrane protein [Xylella fastidiosa Dixon]
 gi|71730073|gb|EAO32164.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1]
 gi|167966146|gb|ACA13156.1| 60kDa inner-membrane protein [Xylella fastidiosa M12]
          Length = 565

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 121/593 (20%), Positives = 229/593 (38%), Gaps = 50/593 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN-------IQTVKQPNQVDNSY 53
           M +     +   L+V  +  W ++          +   N             P     + 
Sbjct: 1   MNQTRVLLIFSWLTVATLL-WMDWGKNKNETLEISASHNLGVDSHLELEHAVPQINAGAV 59

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
                     A    P + +    L   ++  G      +L  +       +  + LL+ 
Sbjct: 60  PVQKDSQLIAAAPKVPVINVTTDVLQLKLD--GFSILAADLLRFPQSKDRGAKPIKLLTD 117

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFE 169
                 Y A   +VS +N+     S  +               +LV    +  AN +   
Sbjct: 118 DPNY-PYSATTGWVSQSNSPVPNLSTFLPEQSGVSYKLANDQDRLVVPFVWTAANGVSIR 176

Query: 170 RTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV------QEGFIA 222
           RT +     Y   I D + N+           ++ R       N            G + 
Sbjct: 177 RTFTFERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFSFNGAVW 236

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                    + + D       N      W+ +   ++ + +IP K+    +    L+   
Sbjct: 237 YSEKGGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQ---ASLYLLAQNG 293

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
           +R  A+      T+ PG+S  T   L+ G K    I        + R      +     I
Sbjct: 294 SRDIAELRGPAFTVAPGQSTMTEARLWVGPKLVEQITKEHVK-GLDRVVDYSRFQLMALI 352

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            + +F ++S+  +L+ N+G AI+   V +++  +PL+  QY S A M+  QP++ +L+E+
Sbjct: 353 GQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSAAQYKSAAKMRKFQPRLQQLKER 412

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +     Q  Q+AM++LYK   INP+ GC+PIL+Q+P+FFA+Y V+  S+E+R AP+ GWI
Sbjct: 413 Y-GEDRQKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWLGWI 471

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMIL 520
           +DL   DP                     I P++  + M+   K++P P   D     ++
Sbjct: 472 QDLTTRDPYF-------------------ILPLLNIVIMWATQKLTPTPAGMDPIAGKMM 512

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA--EIGLIDRLR 571
             MP++F   ++  P+GL +YW  +  ++++ Q  ++  +         + ++
Sbjct: 513 QVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIHQYADFSRKRSRENIK 565


>gi|57242374|ref|ZP_00370313.1| 60 kDa inner-membrane protein [Campylobacter upsaliensis RM3195]
 gi|57017054|gb|EAL53836.1| 60 kDa inner-membrane protein [Campylobacter upsaliensis RM3195]
          Length = 537

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 135/579 (23%), Positives = 263/579 (45%), Gaps = 60/579 (10%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPR-------IEEMNNERKNIQTVKQPNQVDNSYAA 55
           +     +A+ LS I   A+  F++           +    + +N++    P   ++   +
Sbjct: 11  QQKRILLAVVLSFIFFVAYDYFFLPKPNLNEQNITQNNTTKTQNLEANAAPKLQEDLAKS 70

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
           V  +    ++       +++P     I+  G +     L+     ++ +   + L++   
Sbjct: 71  VETNGALSSVKSGVLASVESPHFKAEIDTLG-RISSFYLKD-KKYLNEDKNQINLIAKDQ 128

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
                  EL + +++ N E   ++   +     +    +   ++ +N +N+  E+ I+ D
Sbjct: 129 NPRP--LELRFSNSSINEEAFKTDYKTSTNELFLDINESKKLILTQNLSNLKVEKIITFD 186

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
               ++I   +  N+       P       +P  A +++ V    +    + +     + 
Sbjct: 187 PRGNYEIEVRLNQNA-------PFFITPGFRPSIAVDSYTVHGALVLDSENTTH---TFE 236

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D +        ++       D+Y+AS             F           +K + +   
Sbjct: 237 DGDMDMEERIDKAFIASAF-DRYYAS------------FFYNFDKPLNLTISKDTNDNPI 283

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           +            + GAKE   +   +K     R E ++++GWF FIAKPM++ + + + 
Sbjct: 284 LFAYADREFKAGGYIGAKEHEALRAIDK-----RLEDVVEFGWFTFIAKPMYVGLDFLFK 338

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            +GN+G AI++ T+ V+++ FPL  K  +S   +K++ PK+ E+RE++K   PQ +   M
Sbjct: 339 HIGNWGWAIVVLTLIVRVILFPLTYKSMISMNKLKDLAPKMKEIRERYKG-DPQKMNMHM 397

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK H  NP++GC PILLQIP+FFAIY+V+  ++E++ AP+  WI+DL+A DP     
Sbjct: 398 MELYKKHGANPMSGCLPILLQIPIFFAIYRVLFNAIELKDAPWIFWIQDLSAMDPYF--- 454

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534
                           I PI+M  +MF+Q  ++P    D  QA I+ ++PV+F     +F
Sbjct: 455 ----------------ILPILMGATMFLQQLITPMTIQDPLQAKIMKFLPVIFTIFFITF 498

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           PAGL +YW  +N+ S++QQ +I KM   E    +  ++ 
Sbjct: 499 PAGLTLYWFINNLCSLLQQWIINKMFEKEHHKRESEKAK 537


>gi|315638576|ref|ZP_07893750.1| inner membrane protein [Campylobacter upsaliensis JV21]
 gi|315481200|gb|EFU71830.1| inner membrane protein [Campylobacter upsaliensis JV21]
          Length = 537

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 136/579 (23%), Positives = 264/579 (45%), Gaps = 60/579 (10%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPR-------IEEMNNERKNIQTVKQPNQVDNSYAA 55
           +     +A+ LS I   A+  F++           +    + +N++    P   ++   +
Sbjct: 11  QQKRILLAVVLSFIFFVAYDYFFLPKPNLNEQNITQNNTTKTQNLEANAAPKLQEDLAKS 70

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
           V  +    ++       +++P     I+  G +     L+     ++ +   + L++   
Sbjct: 71  VETNGALSSVKSGVLASVESPHFKAEIDTLG-RISSFYLKD-KKYLNEDKSQINLIAKEQ 128

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
                  EL + +++ N E   ++   +     + T  +   ++ +N +N+  E+ I+ D
Sbjct: 129 NPRP--LELRFSNSSINEEAFKTDYKASANELFLDTNESKKLILTQNLSNLKVEKIITFD 186

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
               ++I   +  N+       P       +P  A +++ V    +    + +     + 
Sbjct: 187 PRGNYEIEVRLNQNA-------PFFITPGFRPSIAVDSYTVHGALVLDSENTTH---TFE 236

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D +        ++       D+Y+AS             F           +K + +   
Sbjct: 237 DGDMDMEERIDKAFIASAF-DRYYAS------------FFYNFDKPLNLTISKDTNDNPI 283

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           +            + GAKE   +   +K     R E ++++GWF FIAKPM++ + + + 
Sbjct: 284 LFAYADREFKAGGYIGAKEHEALRAIDK-----RLEDVVEFGWFTFIAKPMYVGLDFLFK 338

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            +GN+G AI++ T+ V+++ FPL  K  +S   +K++ PK+ E+RE++K   PQ +   M
Sbjct: 339 HIGNWGWAIVVLTLIVRVILFPLTYKSMISMNKLKDLAPKMKEIRERYKG-DPQKMNMHM 397

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK H  NP++GC PILLQIP+FFAIY+V+  ++E++ AP+  WI+DL+A DP     
Sbjct: 398 MELYKKHGANPMSGCLPILLQIPIFFAIYRVLFNAIELKDAPWIFWIQDLSAMDPYF--- 454

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534
                           I PI+M  +MF+Q  ++P    D  QA I+ ++PV+F     +F
Sbjct: 455 ----------------ILPILMGATMFLQQLITPMTIQDPLQAKIMKFLPVIFTIFFITF 498

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           PAGL +YW  +N+ S++QQ +I KM   E    +  ++ 
Sbjct: 499 PAGLTLYWFINNLCSLLQQWIINKMFEKEHHKRESEKAK 537


>gi|223039678|ref|ZP_03609964.1| inner membrane protein OxaA [Campylobacter rectus RM3267]
 gi|222879061|gb|EEF14156.1| inner membrane protein OxaA [Campylobacter rectus RM3267]
          Length = 520

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 123/568 (21%), Positives = 230/568 (40%), Gaps = 58/568 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M       +A  LS I   A+  F++   +    N+    Q   Q N   ++  A     
Sbjct: 5   MSVQKRVILATVLSFIFFIAYDYFFIPKNLPLDQNQTVAAQQTSQANAAPSANTASGASA 64

Query: 61  RAQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
                + S  +  +K       I+  G +     L       +++   + L         
Sbjct: 65  PQAVATQSREIAVIKGEHFEARIDELG-RISKFYLNDEKYK-NADGERIEL----AGAQP 118

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
              E+ +   A N +        ++    + +    I L      + + ++         
Sbjct: 119 LPLEVRFSDKALNEQAFKVAYASDVSEINLTSEPKSIVLTQNLEGSSVTKKITFYPNGSY 178

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
                    +    +           +P  + +++ V    +         +    +   
Sbjct: 179 ---------DLDLSVSAGEYYVTPGFRPNVSIDSYTVHGALLKHNDG----KLTIIEDGD 225

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
              +    + +    SD+Y+ ++F            K  +     +              
Sbjct: 226 VDATESFNNVNIAAASDRYYTALFFKFDGLLNPVVSKDGAGNAVIFVKG----------- 274

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359
                    + GAK+  T+    ++        +I++GWF FIAKPMF  ++  Y  +GN
Sbjct: 275 -EQNFKAKGYIGAKDHATLSQINEE-----LVDVIEYGWFTFIAKPMFAFLNLLYGYIGN 328

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +G AI++ T+ ++++ FPL  K  +S   +K++ PK+ EL+ K+K   PQ L   M++LY
Sbjct: 329 WGWAIVVLTLVIRIVLFPLTYKGMLSMNKLKDLAPKVKELQAKYKG-DPQKLNMHMMELY 387

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           K +  NP+ GC PIL+QIP+FFAIY+V+  ++E++ AP+  WI DL+  DP         
Sbjct: 388 KKNGANPMGGCLPILMQIPIFFAIYRVLLNAIELKAAPWILWIHDLSVMDPYF------- 440

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538
                       + PI+M  +MF+Q K++P   +D  Q  I+ ++P++F F   +FPAGL
Sbjct: 441 ------------VLPILMGATMFLQQKLTPTTFSDPMQEKIMKFLPLIFTFFFVTFPAGL 488

Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGL 566
            +YW  +NV S++QQ  + K+      +
Sbjct: 489 TLYWFVNNVCSVIQQIFVNKLFEKHKKV 516


>gi|291278771|ref|YP_003495606.1| preprotein translocase YidC subunit [Deferribacter desulfuricans
           SSM1]
 gi|290753473|dbj|BAI79850.1| preprotein translocase YidC subunit [Deferribacter desulfuricans
           SSM1]
          Length = 504

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 136/560 (24%), Positives = 240/560 (42%), Gaps = 57/560 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+      +A+ LS++++  +Q  Y  P    + +E K  ++    N+        +   
Sbjct: 1   MD--KRTLIAVLLSILVLMIFQFMY-TPSQAPVVSENKTAESTPNVNKEPEKIDLNIAQK 57

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
             +        E+    +  S +          +  Y    + +   V      + +  Y
Sbjct: 58  SNEKSFKPDVFEVSTDYVSISFDKNSGDVYSAAILKYR---NKDIGKVVF---KDGEKNY 111

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
            +  +         L                  T +       + ++ +     ++ YL 
Sbjct: 112 LSIDNLNYDKVEYNLEKGK------------DNTIVNFNCFVGDVVITKSYRISNKKYLI 159

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
                ++N     ++      I     +    +    EG I   G K   E      +K 
Sbjct: 160 DYYLKISNTGDKTVKLPLTITIGPDFGEGFEKSKYAFEGPIIFDGKKVYKE----RPDKV 215

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
                     W+G + KY+      +         KY        +  +  N     P +
Sbjct: 216 KKDVVVNKPLWIGYTTKYFLFS--TATNFEKGFIKKYKDSAIVGGEINYILN-----PRE 268

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
           +      LF G KE+  +          +FE  I++G F F+A PM +L++ FY+ + N+
Sbjct: 269 TKQLKLALFTGPKEYKLLKSSGY-----KFEKSINFGIFSFLAIPMLLLLNMFYSFLHNY 323

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G+AI+L T+ +K++ +PL  K   S   M+ IQP+I ++REKFK   PQ +  AM++LYK
Sbjct: 324 GVAIILLTIIIKIVTYPLTLKSMTSMKKMQLIQPEIQKIREKFKG-DPQKMNAAMMELYK 382

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
            + +NP+ GC P+L+QIP+FFA+YK + +S+E++ +PF+GWI DL+  DP          
Sbjct: 383 KYGVNPMGGCLPMLIQIPIFFALYKALLVSIELKGSPFFGWITDLSMKDPYY-------- 434

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
                      I PI+M ++MFIQ KM+P   D  Q  +  +MP++F F   +FP+GL+I
Sbjct: 435 -----------ITPILMGITMFIQQKMTPQAGDPTQQKLFMFMPIIFTFLFLNFPSGLVI 483

Query: 541 YWSWSNVISIVQQAVIMKMH 560
           YW  +N+++I+QQ  I K  
Sbjct: 484 YWLTNNILTIIQQYFINKKT 503


>gi|15616645|ref|NP_239857.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11131221|sp|P57131|OXAA_BUCAI RecName: Full=Membrane protein oxaA
 gi|25299099|pir||G84931 60 kD inner-membrane protein [imported] - Buchnera sp.  (strain
           APS)
 gi|10038708|dbj|BAB12743.1| 60 kD inner-membrane protein [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 532

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 139/571 (24%), Positives = 254/571 (44%), Gaps = 62/571 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N+F+   L  +    WQ +     + +  NE+                    I  
Sbjct: 1   MEVQRNFFIFAFL-FVSFLLWQAWQSQMFLNKKTNEK-----------------IDPIFH 42

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                    ++ +KN  +   +N+ G   ++ +L  Y   + S+ P   L   + +   Y
Sbjct: 43  FIDVKKNKKKIFIKNDVISLVVNMYGGDVEEASLLAYKDTLYSSRPFKLL--ETGSDFIY 100

Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLD 175
            A+   +     +  + +S  +++      +      +L     + + N +++++T  L 
Sbjct: 101 QAQSGLIGKDGPDSSINDSRPLYSANKNFFVLGPNEKELRVPIKWLSKNGVIYKKTFILK 160

Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227
            + Y  +I   V N S + +  +  G+I +           +         G      D 
Sbjct: 161 PNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKRNVYSGNFALQTFRGAAYSSDDN 220

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   +    + W+ +  +Y+A  +IP            L   H     
Sbjct: 221 KYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIPDNLGKNTIYTSSLD--HDTAVI 278

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  I I P       + L+ G K    +         P  ++ +D+GW +F+++P+F
Sbjct: 279 GYKSPIINIPPNSRSIIKSKLWIGPKIQKEMKLVA-----PNLDLTVDYGWLWFLSQPLF 333

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L++  Y+++GN+G +I+L T  ++ L +PL K QY+S A M+ +QPKI E++EKF +  
Sbjct: 334 KLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQYISMAKMRALQPKIQEIKEKFSKDK 393

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + MI LYK   INPL G  PI +Q+P+F ++Y ++  S+E+RHAPF  WI DL++
Sbjct: 394 -QRISQEMILLYKKEKINPLGGFLPIFIQMPIFLSLYYMLIGSVELRHAPFLLWIHDLSS 452

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWMPV 525
            DP                     + P+IM L+MF   K+S     +D  Q  I+N+MPV
Sbjct: 453 QDPYY-------------------VLPVIMGLTMFFIQKISSTNHISDPLQKKIMNFMPV 493

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F      FP+GL++Y+  SN+++I+QQ  I
Sbjct: 494 IFTAFFLWFPSGLVLYYIISNLVTIIQQKFI 524


>gi|219681403|ref|YP_002467788.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471077|ref|ZP_05635076.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254772755|sp|B8D8H9|OXAA_BUCA5 RecName: Full=Membrane protein oxaA
 gi|219624246|gb|ACL30401.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 532

 Score =  269 bits (688), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 138/571 (24%), Positives = 254/571 (44%), Gaps = 62/571 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N+F+   L  +    WQ +     + +  NE+                    I  
Sbjct: 1   MEVQRNFFIFAFL-FVSFLLWQAWQSQMFLNKKTNEK-----------------IDPIFH 42

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                    ++ +KN  +   +N+ G   ++ +L  Y   + S+ P   L   + +   Y
Sbjct: 43  FIDVKKNKKKIFIKNDVISLVVNMYGGDVEEASLLAYKDTLYSSRPFKLL--ETGSDFIY 100

Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLD 175
            A+   +     +  + +S  +++      +      +L     + + N +++++T  L 
Sbjct: 101 QAQSGLIGKDGPDSSINDSRPLYSANKNFFVLGPNEKELRVPIKWVSKNGVIYKKTFILK 160

Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227
            + Y  +I   V N S + +  +  G+I +           +         G      D 
Sbjct: 161 PNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKRNVYSGNFALQTFRGAAYSSDDN 220

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   +    + W+ +  +Y+A  +IP            L   H     
Sbjct: 221 KYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIPDNLGKNTIYTSSLD--HDTAVI 278

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  I I P       + L+ G +    +         P  ++ +D+GW +F+++P+F
Sbjct: 279 GYKSPIINIPPNSRSIIKSKLWIGPEIQKEMKLVA-----PNLDLTVDYGWLWFLSQPLF 333

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L++  Y+++GN+G +I+L T  ++ L +PL K QY+S A M+ +QPKI E++EKF +  
Sbjct: 334 KLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQYISMAKMRALQPKIQEIKEKFSKDK 393

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + MI LYK   INPL G  PI +Q+P+F ++Y ++  S+E+RHAPF  WI DL++
Sbjct: 394 -QRISQEMILLYKKEKINPLGGFLPIFIQMPIFLSLYYMLIGSVELRHAPFLLWIHDLSS 452

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWMPV 525
            DP                     + P+IM L+MF   K+S     +D  Q  I+N+MPV
Sbjct: 453 QDPYY-------------------VLPVIMGLTMFFIQKISSTNHISDPLQKKIMNFMPV 493

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F      FP+GL++Y+  SN+++I+QQ  I
Sbjct: 494 IFTAFFLWFPSGLVLYYIISNLVTIIQQKFI 524


>gi|219681959|ref|YP_002468343.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|254772756|sp|B8D6T3|OXAA_BUCAT RecName: Full=Membrane protein oxaA
 gi|219621692|gb|ACL29848.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311085765|gb|ADP65847.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086342|gb|ADP66423.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 532

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 138/571 (24%), Positives = 254/571 (44%), Gaps = 62/571 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N+F+   L  +    WQ +     + +  NE+                    I  
Sbjct: 1   MEVQRNFFIFAFL-FVSFLLWQAWQSQMFLNKKTNEK-----------------IDPIFH 42

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                    ++ +KN  +   +N+ G   ++ +L  Y   + S+ P   L   + +   Y
Sbjct: 43  FIDVKKNKKKIFIKNDVISLVVNMYGGDVEEASLLAYKDTLYSSRPFKLL--ETGSDFIY 100

Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLD 175
            A+   +     +  + +S  +++      +      +L     + + N +++++T  L 
Sbjct: 101 QAQSGLIGKDGPDSSINDSRPLYSANKNFFVLGPNEKELRVPIKWLSKNGVIYKKTFILK 160

Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227
            + Y  +I   V N S + +  +  G+I +           +         G      D 
Sbjct: 161 PNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKRNVYSGNFALQTFRGAAYSSDDN 220

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   +    + W+ +  +Y+A  +IP            L   H     
Sbjct: 221 KYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIPDNLGKNTIYTSSLD--HDTAVI 278

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  I I P       + L+ G +    +         P  ++ +D+GW +F+++P+F
Sbjct: 279 GYKSPIINIPPNSRSIIKSKLWIGPEIQKEMKLVA-----PNLDLTVDYGWLWFLSQPLF 333

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L++  Y+++GN+G +I+L T  ++ L +PL K QY+S A M+ +QPKI E++EKF +  
Sbjct: 334 KLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQYISMAKMRALQPKIQEIKEKFSKDK 393

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + MI LYK   INPL G  PI +Q+P+F ++Y ++  S+E+RHAPF  WI DL++
Sbjct: 394 -QRISQEMILLYKKEKINPLGGFLPIFIQMPIFLSLYYMLIGSVELRHAPFLLWIHDLSS 452

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWMPV 525
            DP                     + P+IM L+MF   K+S     +D  Q  I+N+MPV
Sbjct: 453 QDPYY-------------------VLPVIMGLTMFFIQKISSTNHISDPLQKKIMNFMPV 493

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F      FP+GL++Y+  SN+++I+QQ  I
Sbjct: 494 IFTAFFLWFPSGLVLYYIISNLVTIIQQKFI 524


>gi|224418480|ref|ZP_03656486.1| putative inner membrane protein translocase component YidC
           [Helicobacter canadensis MIT 98-5491]
 gi|253827793|ref|ZP_04870678.1| putative inner membrane protein translocase component YidC
           [Helicobacter canadensis MIT 98-5491]
 gi|313142010|ref|ZP_07804203.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|253511199|gb|EES89858.1| putative inner membrane protein translocase component YidC
           [Helicobacter canadensis MIT 98-5491]
 gi|313131041|gb|EFR48658.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 536

 Score =  269 bits (687), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 125/559 (22%), Positives = 230/559 (41%), Gaps = 53/559 (9%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
                  +A+ L++     +  FY     E       +IQT +       +      +  
Sbjct: 9   NSQTRIIIAVVLALAFFVPYSYFYAPKPQENNATATSSIQTTQNLPITQEAKPNPTQESA 68

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
             + +      +   +    I+  G +   + L+        ++  + L S         
Sbjct: 69  QLSTTQEIITTINGENFEYQIDRLG-RITQVTLKE--EKYHKDAKNLELFSNDIANQNNP 125

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHYLF 180
             L+     + +     NT +   +  I     P  L       N    +TI+   + L+
Sbjct: 126 KILEIRFADSMLNQQAFNTPYQTSATNIELKDKPQSLTLTQKLENFTLTKTITFHPNGLY 185

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
           ++   +  N            I      +A N   V +G I    D ++   +  D    
Sbjct: 186 EVKVEIPQN--------YTYFISPGMRPSAENDSYVFKGVIIKEQDGTITTIEDGDSSGQ 237

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
           S      ++S L   D+Y+ ++F                +                    
Sbjct: 238 S---NFTNSSILAAVDRYYTTLFFSQSNNLNAIVLSNAEEN------------PMPFLSA 282

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
           +       + G K++  +         P    ++++G   F AKP+F+L+   Y+  GN+
Sbjct: 283 NGNIELSGYIGPKDYRLLESIN-----PNLTEVVEYGIITFFAKPLFLLLETLYDWCGNW 337

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G AI+L T+ V+++ +PL  K  VS   +K + PK+ E+++K+K   PQ LQ  M++LYK
Sbjct: 338 GWAIILLTLIVRVVLYPLTYKGMVSMQKLKELAPKMKEIQQKYKG-EPQKLQVHMMELYK 396

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
            H  NP+ GC P+LLQ+PVFFAIY+V+  ++E++ A +  WI+DL+  DP          
Sbjct: 397 KHGANPMGGCLPLLLQMPVFFAIYRVLYNAIELKGAAWLLWIQDLSVMDPYF-------- 448

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539
                      + PI+M ++M++Q  ++P    D  Q  I  ++P++F     +FP+GL+
Sbjct: 449 -----------VLPILMGITMYLQQHLTPTTFNDPIQEKIFKFLPLIFTIFFVTFPSGLV 497

Query: 540 IYWSWSNVISIVQQAVIMK 558
           +YW  +N+ SI+QQ +I K
Sbjct: 498 LYWFVNNIFSILQQLLINK 516


>gi|313672991|ref|YP_004051102.1| membrane protein insertase, yidc/oxa1 family [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939747|gb|ADR18939.1| membrane protein insertase, YidC/Oxa1 family [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 504

 Score =  269 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 143/561 (25%), Positives = 245/561 (43%), Gaps = 57/561 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+      +A+A+S++I+ A+Q F+    +     +  +    K  + V +      I +
Sbjct: 1   MD--KRTLLAVAISIMILIAYQFFFAPAPMP--VAQDNSATLSKDKDNVASKSEVKTISN 56

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                      ++ N  +    +      + +++  Y        P+VT  + ++     
Sbjct: 57  LTTKSKSIEVEKVSNGFVEIYFDKHSGNINKVSVIKYR---DKKLPMVTFKTDNDNY--- 110

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
                       +++ +       +  K L     I       N  + +      E YL 
Sbjct: 111 ------------MKVLDGYGDNYSMDIKELDGKKIITFSALQNNIGITKTYTIGKEGYLI 158

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
            +   V+NNS   ++      I     +    +  + EG +   G     +++    EK 
Sbjct: 159 DLNLKVSNNSDQTVKLEGNIDIGPGFGEGFEKSSYIFEGPMIYNG----EKKEEVAPEKI 214

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
             +   ++  W+G + KY+    I               +            +I + P  
Sbjct: 215 KDTIKLDAPKWIGYTTKYYLIAAIDGNLELGKI------EKVGESAIVKGVKQIILNPKS 268

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
           +      ++ G KE+  +  +         E  ID+GWF F+A PM   M + Y+   N+
Sbjct: 269 TSNIKFNIYVGPKEYDLLKSFNL-----GLEHSIDFGWFKFLAVPMLKFMIFIYSFTKNY 323

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G+AI++ T+ VKLL +PL  K   S   M+ IQPK+ E++EKFK   PQ +  AM++LY+
Sbjct: 324 GVAIIILTIIVKLLTYPLTIKSMTSMKKMQQIQPKLMEIKEKFKN-DPQKMNTAMMELYR 382

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
            H +NP+ GC P+++QIP+FFA+YK + +S+E++ +PF  WI DL+  DP          
Sbjct: 383 KHGVNPMGGCLPMIIQIPIFFALYKALLVSVELKGSPFILWITDLSEKDPYY-------- 434

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
                      I PIIM ++MFIQ KM+P   D  Q  I   MPV+F F   SFP+GL+I
Sbjct: 435 -----------ITPIIMGITMFIQQKMTPSTMDPMQQKIFLMMPVIFTFLFLSFPSGLVI 483

Query: 541 YWSWSNVISIVQQAVIMKMHG 561
           YW  +N++SI+QQ  I K   
Sbjct: 484 YWLTNNILSIIQQYYINKKLT 504


>gi|311086918|gb|ADP66998.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 532

 Score =  269 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 137/571 (23%), Positives = 252/571 (44%), Gaps = 62/571 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N+F+   L  +    WQ +     + +  NE+                    I  
Sbjct: 1   MEVQRNFFIFAFL-FVSFLLWQAWQSQMFLNKKTNEK-----------------IDPIFH 42

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                    ++ +KN  +   +N+ G   ++ +L  Y   + S+ P   L   + +   Y
Sbjct: 43  FIDVKKNKKKIFIKNDVISLVVNMYGGDVEEASLLAYKDTLYSSRPFKLL--ETGSDFIY 100

Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLD 175
            A+   +     +  + +S  +++      +      +L     + + N +++++   L 
Sbjct: 101 QAQSGLIGKDGPDSSINDSRPLYSANKNFFVLGPNEKELRVPIKWLSKNGVIYKKIFILK 160

Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-------VQEGFIAVLGDK 227
            + Y  +I   V N S + +  +  G+I +                     G      D 
Sbjct: 161 PNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKRNVYSRNFALQTFRGAAYSSDDN 220

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   +    + W+ +  +Y+A  +IP            L   H     
Sbjct: 221 KYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIPDNLGKNTIYTSSLD--HDTAVI 278

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + +  I I P       + L+ G +    +         P  ++ +D+GW +F+++P+F
Sbjct: 279 GYKSPIINIPPNSRSIIKSKLWIGPEIQKEMKLVA-----PNLDLTVDYGWLWFLSQPLF 333

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L++  Y+++GN+G +I+L T  ++ L +PL K QY+S A M+ +QPKI E++EKF +  
Sbjct: 334 KLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQYISMAKMRALQPKIQEIKEKFSKDK 393

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q + + MI LYK   INPL G  PI +Q+P+F ++Y ++  S+E+RHAPF  WI DL++
Sbjct: 394 -QRISQEMILLYKKEKINPLGGFLPIFIQMPIFLSLYYMLIGSVELRHAPFLLWIHDLSS 452

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWMPV 525
            DP                     + P+IM L+MF   K+S     +D  Q  I+N+MPV
Sbjct: 453 QDPYY-------------------VLPVIMGLTMFFIQKISSTNHISDPLQKKIMNFMPV 493

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F      FP+GL++Y+  SN+++I+QQ  I
Sbjct: 494 IFTAFFLWFPSGLVLYYIISNLVTIIQQKFI 524


>gi|254509058|ref|ZP_05121161.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus 16]
 gi|219547991|gb|EED25013.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus 16]
          Length = 448

 Score =  268 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 125/472 (26%), Positives = 212/472 (44%), Gaps = 37/472 (7%)

Query: 99  LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTT 154
            ++ S    V L   +   + + A+   V          +   + + +            
Sbjct: 2   AEMDSADAFVLL--KNEPGHQFIAQSGLVGPQGIDLSSTNRPAYAVSTDSFTLADGQDEL 59

Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-T 213
            + + +        +  I     Y   +   V NNS +   F     + ++      + T
Sbjct: 60  RVPMTYAANGLEYTKTFILKRGSYAIDVEYNVVNNSGNNATFGMYAHLRQNLLDAGGSIT 119

Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFH 272
                G      D    +  + D++  ++S        W  +   Y+AS +IP  E   +
Sbjct: 120 MPTYRGGAYSTEDTRYKKYSFEDMQDRNLSLNLPDGQGWAAMIQHYFASAWIPRNEPGTN 179

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
              + + +              TI  G S   T  L+ G K    +         P  ++
Sbjct: 180 LYTRVIGNLGD---IGVRMPNKTIATGDSAQMTATLWVGPKLQDQMAEVA-----PNLDL 231

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           ++D+GW +FIAKP+  L+S+  + VGN+G+AI+  T  V+   +PL K QY S A M+ +
Sbjct: 232 VVDYGWLWFIAKPLHSLLSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRML 291

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QPK+  +RE+      Q + + M++LYK   +NPL GC P++LQ+P+F A+Y  +  S+E
Sbjct: 292 QPKLQAMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVE 350

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511
           +RH+PF+GWI DL+A DP                     I P++M  SMF+  KMSP   
Sbjct: 351 LRHSPFFGWIHDLSAQDPYY-------------------ILPLLMGASMFLIQKMSPTTV 391

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            D  Q  I+ +MPV+F F    FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 392 TDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 443


>gi|238783045|ref|ZP_04627072.1| Inner membrane protein oxaA [Yersinia bercovieri ATCC 43970]
 gi|238716046|gb|EEQ08031.1| Inner membrane protein oxaA [Yersinia bercovieri ATCC 43970]
          Length = 398

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 114/409 (27%), Positives = 199/409 (48%), Gaps = 35/409 (8%)

Query: 158 LVFKNANNILFERTISLDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTAT 211
           + F   +  +F +T  L  +     +   V N S   +  +  G++ +         T +
Sbjct: 1   MTFTGKDGSVFTKTFVLKRNDYAIGVDYHVKNASDAPLELTLFGQLKQSINLPKHRDTGS 60

Query: 212 NTFGVQEGFIAVLGDKSLVEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270
           N F +     A         +KY     +    +      W+ +  +Y+A+ +IP+    
Sbjct: 61  NNFALHTYRGAAYSSDDTKYKKYSFSDIEDKSLDITTKGGWVAMLQQYFATAWIPAANE- 119

Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
             + F     G+      F    + I PG+       L+ G +    +         P  
Sbjct: 120 -TNTFYSADLGNGLAAIGFKGMPVVIQPGEQKQLGATLWVGPEIQDKMAAIA-----PHL 173

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++ +D+GW +FI++P+F L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+
Sbjct: 174 DLTVDYGWLWFISQPLFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMR 233

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            +QPK+  +RE+      Q + + M+ LYK   +NPL GC P+++Q+P+F A+Y ++  S
Sbjct: 234 LLQPKLAAMRERIGDDK-QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSS 292

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +E+RHAPF  WI DL+A DP                     I PI+M ++M+   KMSP 
Sbjct: 293 VELRHAPFILWIHDLSAQDPYY-------------------ILPILMGITMYFIQKMSPT 333

Query: 511 P-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              D  Q  I+ +MPV+F      FPAGL++Y+  SN+++I+QQ +I +
Sbjct: 334 TVTDPMQQKIMTFMPVIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 382


>gi|32490762|ref|NP_871016.1| hypothetical protein WGLp013 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|38502995|sp|Q8D3I8|OXAA_WIGBR RecName: Full=Membrane protein oxaA
 gi|25165968|dbj|BAC24159.1| yidC [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 540

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 138/567 (24%), Positives = 252/567 (44%), Gaps = 49/567 (8%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
           + N+ +   I ++ +++ AWQ                        N +         +  
Sbjct: 4   QNNFLFIAFIFVTFMMLDAWQ-------------SESYDYKSLDKNHIIEKKNIENKNIN 50

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY- 120
            +  S    + +     I  IN  G   ++ +LR Y  +  +N P+  L    N      
Sbjct: 51  KEVFSRENYITVITDLFILKINTYGGDIEEASLRTYLSNTKNNLPLKILDRSKNFIYKLK 110

Query: 121 --FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH- 177
             F   +     N I +PN  +   L   +  +    + L +   N + + +     ++ 
Sbjct: 111 SGFITKNDHDINNLIHIPNFISDKKLYILEDNSDYLQVPLFYNGENGLKYVKNFIFKKNS 170

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-----FGVQEGFIAVLGDKSLVEQ 232
           +  KI  ++ N + D++     G++ +       N      F    G      +    + 
Sbjct: 171 FSLKINYSIKNTNKDKMEMMFFGQLEQSIKDQEINNGYNFNFHTYRGAAYSSDNNKYKKY 230

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
            +S+I      N   SN W+ +  +Y+   +IP  E  +    K +     +    F + 
Sbjct: 231 DFSEISNDKNLNVITSNGWIAMLQQYFIVAWIPKIENKYKFYTKNIPKD-EKVSIGFQSE 289

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
             +I   +     + L+ G K    ++  + +       + +D+GW +FIA+P+  L+ +
Sbjct: 290 LFSIDQEEEKNIESTLWIGPKLQDKMYEVDAN-----LGLTVDYGWLWFIAQPLLQLLKF 344

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
            Y  + N+GI+I++ T  V+ + FPL K QY S A M+ +QPKI E++ KF     +   
Sbjct: 345 IYKYINNWGISIIIITFMVRGIMFPLTKAQYTSMAKMRILQPKIIEIKNKFSNDK-KRQS 403

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           K M+ LYK   +NPL GC P+++Q+P+F A+Y ++S S+E+RHA F  WI DL++ DP  
Sbjct: 404 KEMMSLYKKQKVNPLGGCMPLIIQMPIFLALYYMLSGSVELRHAHFVLWINDLSSKDPYY 463

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531
                              I PIIM ++MF+  K+SP   +D  Q  I+++MP++F    
Sbjct: 464 -------------------ILPIIMGITMFLIQKISPSSISDPVQKKIVSFMPLIFTIFF 504

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558
             FP+GL++Y+  SN+++I+QQ +I K
Sbjct: 505 LWFPSGLVLYYIISNLVTIIQQYIIYK 531


>gi|157164729|ref|YP_001466647.1| putative inner membrane protein translocase component YidC
           [Campylobacter concisus 13826]
 gi|157101469|gb|EAT97433.2| inner membrane protein OxaA [Campylobacter concisus 13826]
          Length = 517

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 127/563 (22%), Positives = 233/563 (41%), Gaps = 67/563 (11%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M       +A  LS++    +  F       E N         +  +Q     +A     
Sbjct: 4   MSMQKRLLLAALLSIVFFIVYDFFMPKRAPLEQNQ----TTISQTMDQSKAPASANDTPK 59

Query: 61  RAQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTK 117
             + L+ +  +  +K  S    I+  G +     L    Y      +   + L+S +   
Sbjct: 60  SNENLASNEIIATIKGQSYEAKIDKLG-RIAKFYLTEDKYKT---EDGNKIELVSQN--- 112

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDE 176
                 L+     + +        ++    +I   + P  +      + +   + I    
Sbjct: 113 ---PLPLELRFNDSTLNADAFKVAYSSDVSEIDASSEPKTIKLTQNLDGVTVTKNIKFYP 169

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           +  +++   ++ +    I    R  I               +  + ++ D    E K   
Sbjct: 170 NGRYEVEVNLSKSVDYFITPGFRPNIAIDSYTVHGVMLRNTDDSLNIIEDGDAKEVK--- 226

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
                                Y  +    + +  + + F   +        K + N   +
Sbjct: 227 --------------------NYANTTIAAASDRYYTALFYSFNKPFEAVVDKDANNNPIV 266

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
               + +     + G KE   +   ++     R   +I++GWF FIAKPMF  +++ +N 
Sbjct: 267 FVKTNDSLKLGAYIGPKEHKILSSMDE-----RLNDVIEYGWFTFIAKPMFAFLNFLHNY 321

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           +GN+G AI++ T+ ++++ FPL  K  +S   +K + PK+ E++ K+K    Q +Q  M+
Sbjct: 322 IGNWGWAIVVLTLVIRIVLFPLTYKGMLSMNKLKELAPKVKEIQTKYKDDK-QKMQVHMM 380

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LYK H  NP+ GC PILLQIPVFFAIY+V+  ++E++ AP+  WI DL+  DP      
Sbjct: 381 ELYKKHGANPMGGCLPILLQIPVFFAIYRVLLNAIELKGAPWILWIHDLSVMDPYF---- 436

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535
                          + PI+M L+MF+Q K++P    D  Q  ++ ++P++F F   +FP
Sbjct: 437 ---------------VLPILMGLTMFLQQKLTPTTFTDPMQEKVMKFLPLIFTFFFVTFP 481

Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558
           AGL +YW  +NV S+VQQ  + K
Sbjct: 482 AGLTLYWFVNNVCSVVQQVFVNK 504


>gi|34557650|ref|NP_907465.1| putative inner membrane protein translocase component YidC
           [Wolinella succinogenes DSM 1740]
 gi|38502880|sp|P60037|OXAA_WOLSU RecName: Full=Inner membrane protein oxaA
 gi|34483367|emb|CAE10365.1| 60 KDA INNER-MEMBRANE PROTEIN [Wolinella succinogenes]
          Length = 536

 Score =  266 bits (680), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 122/559 (21%), Positives = 217/559 (38%), Gaps = 59/559 (10%)

Query: 6   NYFVAIALSVIIVYAWQNFYVY----PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
              +A A+S++    +  F+      P  E  + ER   Q   Q +          +   
Sbjct: 13  RILIATAISLLFFIPYSYFFAPVKEAPLKESTSMERAEQQAAPQTSSSPKEGQVSSVAMA 72

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
             + S      ++       I+  G +   + L+                 P     +  
Sbjct: 73  ETSPSKDIIATVQGSHFRLEIDSLG-RIAQVYLKDAKFLKEQKE------LPLLAPLSSL 125

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHYLF 180
             L+   +            +      +    TP  L            + ++      +
Sbjct: 126 RPLEVRFSDATTNKEAFAKSYYSDRDLVEIRNTPETLTLTQELEGFKLTKKLTFYPDGNY 185

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
            +                       +P   ++ F      +   G      +       +
Sbjct: 186 DLEVET------SGSQKRFFLSPGARPIAESDKFAFNGVVLKESGGTIHTTED----GDA 235

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
                 E   ++   D+Y+ ++F   +           ++ +     +   +        
Sbjct: 236 KKDEIFEGARFVASVDRYYTTLFFVKEPQGLRVVISKNAEKNPEPFVEALDH-------- 287

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
                   + GAK+F  +         P    ++++G+  F AKP+F+L+ + Y   GN+
Sbjct: 288 ---LKLSGYIGAKDFRLLESIY-----PSLTDVVEYGFITFFAKPLFLLLDWLYKFCGNW 339

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G AI+L T+ V+++ FPL  K  VS   +K+I PK+ E++EK+K   PQ LQ  M++LYK
Sbjct: 340 GWAIVLLTLVVRIILFPLTYKGMVSMQKLKDIAPKMKEIQEKYKG-DPQKLQVHMMELYK 398

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
            H  NP+ GC P+LLQ+P+FFAIY+V+  ++E++ A +  WI DL+  DP          
Sbjct: 399 KHGANPMGGCLPLLLQMPIFFAIYRVLYNAIELKGADWILWINDLSVMDPYF-------- 450

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539
                      I PI+M  SMF+Q  ++P    D  Q  +  ++P++F F   +FP+GL+
Sbjct: 451 -----------ILPILMGASMFLQQHLTPTTFTDPMQEKVFKFLPLIFTFFFVTFPSGLV 499

Query: 540 IYWSWSNVISIVQQAVIMK 558
           +YW  SNV SI QQ  I K
Sbjct: 500 LYWFVSNVFSIAQQLFINK 518


>gi|295698381|ref|YP_003603036.1| inner membrane protein OxaA [Candidatus Riesia pediculicola USDA]
 gi|291157428|gb|ADD79873.1| inner membrane protein OxaA [Candidatus Riesia pediculicola USDA]
          Length = 547

 Score =  266 bits (680), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 123/580 (21%), Positives = 255/580 (43%), Gaps = 58/580 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    N  + IAL       WQ +      E+      N ++   P    + Y     + 
Sbjct: 1   MYLQKNL-LFIALLFFSSLIWQIWKNDKVQEKTLI---NAESNDIPLDRSSKYQIQKGEY 56

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            +        +++K       ++ KG     ++L  Y   ++S+ P   +   +     Y
Sbjct: 57  NSF-------IKVKTNVFEILLDKKGGDIHRVDLIQYKKKLNSDEPFRII--DTKEDFVY 107

Query: 121 FAELDYVSTANNIELPNSNTVWNLISG-------KILTPTTPIKLVFKNANNILFERTIS 173
             +  ++       +  +N +    S                + L+F + NN+++E+   
Sbjct: 108 QVQSGFIGKNGPDNISYNNGIRPTYSSRRDYFIIDNEKEYIKVPLIFVSKNNVIYEKIYV 167

Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV-------QEGFIAVLG 225
              + Y  ++   +TNNS + I  S  G++ ++  ++  N             G      
Sbjct: 168 FKRDQYDIEVEYRITNNSAENIEISIFGQLKQNVEESYDNRLENRNFSVRSYRGAAYSSD 227

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
                +  + D+ K  +   H  + W+ +  +Y+AS +I +    + +    ++      
Sbjct: 228 QTKYKKCTFKDLMKKKLE-IHTKSGWIAMLQQYFASAWILND--QYINSVYSINFQGKSA 284

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
              +   +I I   +     + L+ G +    +            ++ +D+GW +FI++P
Sbjct: 285 IIGYRTPKILIKSNERFQYISKLWIGPELQTEMSKVAN-----YLDLTVDYGWLWFISQP 339

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+ + Y  VGN+G +I++ T  V+ L +PL K QY+S A ++ +QPK++E++ +  +
Sbjct: 340 LFQLLQFIYRFVGNWGFSIVIITFIVRGLMYPLTKAQYISMAKIRLLQPKLEEIKNRIGE 399

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              ++  + +++LY+   +NPL GC P+++Q+P+F A+Y ++  S+E+R APF  WI+DL
Sbjct: 400 DKNKM-SQEVVELYRKEKVNPLGGCLPLIIQMPIFLALYYMLIGSVELRQAPFIYWIQDL 458

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMILNWM 523
           ++ DP                       P++M  +M+   KMSP        +  I+N++
Sbjct: 459 SSKDPYYF-------------------LPLLMGCTMYFIQKMSPNTNTSELSREKIINYI 499

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           P+ F      FP+GL++Y+  SN+++I+QQ  I +    +
Sbjct: 500 PIFFTIFFLWFPSGLVLYYIISNLVTIIQQKAIYRFLKKK 539


>gi|116620215|ref|YP_822371.1| protein translocase subunit yidC [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223377|gb|ABJ82086.1| protein translocase subunit yidC [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 579

 Score =  266 bits (679), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 129/572 (22%), Positives = 227/572 (39%), Gaps = 56/572 (9%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP------------NQVDNSY 53
              +A  L   +++     +  P+     +          P                   
Sbjct: 25  RLLLAFILMGAVMFLTPYIFPTPKPPAKKDAATTAAVTPSPAAADASNPAATAPSGPAVV 84

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
            A  +   A      P   +        ++ +GA      L+ Y     ++S  + L++ 
Sbjct: 85  EAGSLPADATQQKPEPAFVINTDLYRVVLSNQGATVRSWQLKRYK---GNDSKPLDLVNS 141

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
            +  +  F+           + P SN  W             +   + + + ++ +    
Sbjct: 142 VSGLDFPFSLYF------PGQKPASNVNWTWYKQTGDADGLGVTYEYSDGHVVVRKVVRF 195

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
             + YL  +   VT +                   T TN    Q      L    LVEQ 
Sbjct: 196 QKDSYLSMVSCEVTLDGKPIPHLLQWR--GGFGDLTLTNAAAGQRTLYFDLTTNKLVEQN 253

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
                         + S+ GI+D Y+A+VF+P             +D      ++     
Sbjct: 254 -PKAAAKGPITSEGTFSFAGIADTYFAAVFLPEGNGRMQQVT--FADTVRTPTSETPLPL 310

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
             +  G        LF G K+   +         P+ E ++D+GW   +AKP+F++++Y 
Sbjct: 311 SGVAVGDGPPIRFELFVGPKDVDMLRKIN-----PKLEQVVDFGWLSVLAKPLFLIVNYV 365

Query: 354 YN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ-----SP 407
            + LV NFG AI+L T+ +  + FPL      S   M+ ++P++D +  K+K        
Sbjct: 366 NDTLVHNFGWAIVLVTIAINFILFPLKLSNMKSMRKMQALKPQVDAINAKYKNVGLRDPR 425

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
                +  + LYK H +NP+ GC P++LQIP FFA YKV ++S+EMR AP+  W+ DL+ 
Sbjct: 426 AADKNQETMDLYKKHGVNPMGGCLPMVLQIPFFFAFYKVFTVSVEMRGAPW-LWVSDLSQ 484

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVV 526
            +                  + + I P++M  S F+  +M+P PA D  Q  ++ +MP+V
Sbjct: 485 PET-----------------LPIKILPLVMIASQFVMQRMTPQPAGDPAQQKMMMFMPLV 527

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           F F   +FP+GL++Y+  SN++S+ QQ    K
Sbjct: 528 FGFMFYNFPSGLVLYYLTSNLVSMGQQWFFNK 559


>gi|145220572|ref|YP_001131281.1| protein translocase subunit yidC [Prosthecochloris vibrioformis DSM
           265]
 gi|189036356|sp|A4SH20|OXAA_PROVI RecName: Full=Inner membrane protein oxaA
 gi|145206736|gb|ABP37779.1| protein translocase subunit yidC [Chlorobium phaeovibrioides DSM
           265]
          Length = 580

 Score =  266 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 114/569 (20%), Positives = 225/569 (39%), Gaps = 29/569 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N    +AL  +I+  W  F    +   +    K   +V+Q N           D 
Sbjct: 1   MD--RNSVTGLALIALIMIVWLQFMSPDKKPVIRESAKKAASVEQVNVPLKPAPVSASDA 58

Query: 61  ----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
                + A   + ++ ++N     +I+ KGA    L L+ +   +      V L+S    
Sbjct: 59  FGAFASAANGKARKMVVENDLFRATISSKGATLTSLVLKKH---LDGALQPVQLVSNRAD 115

Query: 117 ---KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
                 +           ++     +           + +   +L      NIL   + +
Sbjct: 116 GALSLLFLTREGRKIDTRDLYFTGGSVDTLHTVTGKESYSVRYRLNVSKNRNILITYSFT 175

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
            D + +   V     +S                                     SLV+  
Sbjct: 176 GDSYRVGYDVQLNGFSSALAGNEYQLQWDGGLGYTEKNREDEAHNALAGAYLGGSLVKLD 235

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
            +   ++          W+ + +KY+ +  IP+  T           G+       S   
Sbjct: 236 AAKDNQAYREEQSGEAKWVAVRNKYFVAALIPAGPTGGFYLDGSKKAGNEFENYLASLKM 295

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMFML 349
              + G S+  +  L+ G  ++  +   + +      E ++D+GW +    F    +  +
Sbjct: 296 EVPVSGASLDNSFSLYMGPLDYDIVRAQKAE-----LEKIMDFGWDWLTRPFAEYIILPV 350

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
            S+    + N+G+ I++    +KL+ +PL+     S   M  +QP + EL++K+K +P +
Sbjct: 351 FSWMNKFIHNYGLIIIIFAFLIKLVTYPLSLASTKSMKKMAALQPMLKELQDKYKDNPAK 410

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
           +    + ++YK   +NPL GC P++LQ+P+ FA++ V   S+E+R    + W  DL+  D
Sbjct: 411 LQS-ELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIELRQ-HGFLWAHDLSVPD 468

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFV 528
             +I  L   +P Y     H+ + PI+M+ ++F+Q K++P      Q  I+ +M P + +
Sbjct: 469 --SILNLGFTIPMYG---DHIALMPILMAGTVFVQQKITPTAQTNDQMKIMLYMFPAMML 523

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIM 557
              ++ P+GL +Y+   NV S+ QQ  I 
Sbjct: 524 LFFNNMPSGLGLYYLMFNVFSVAQQFYIN 552


>gi|163751385|ref|ZP_02158610.1| inner membrane protein, 60 kDa [Shewanella benthica KT99]
 gi|161328688|gb|EDP99836.1| inner membrane protein, 60 kDa [Shewanella benthica KT99]
          Length = 437

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 120/455 (26%), Positives = 200/455 (43%), Gaps = 34/455 (7%)

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL-----VFKNAN 164
           +L        Y A+   +              ++  S           L        +  
Sbjct: 1   MLLEQTQDINYIAQSGLIGRDGIDSSVKGRAHFDSASRDYTMAAGQETLEVALTYVADNG 60

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
               +  I     +   +   + N +  Q++    G+I     ++ ++         A  
Sbjct: 61  ANYTKMFIFHRGKFNIDVDYVIDNTTDKQLQVQMYGQIKHSIKESESSMMMPTYRGAAFS 120

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
                 E+   D       +      W  +   Y+ S +IP  +          + G A 
Sbjct: 121 TADIRYEKYSFDDMADKNLDNKTLGGWAAMLQHYFVSAWIPPADDQNIIFSSLSAGGQAN 180

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
               F      I PG + T     + G K+   +             +++D+G+ ++IA 
Sbjct: 181 --IGFRGAIYDIAPGATQTIKAQFYVGPKDQKELSAISDS-----LNLVVDYGFLWWIAV 233

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+  L+ +FY++VGN+G AI+L T+ V+ + FPL K QY S A M+++QPK+ E++E+F 
Sbjct: 234 PISKLLMFFYSIVGNWGGAIILITLTVRGMLFPLTKAQYTSMAKMRSLQPKLAEMKERFG 293

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               Q + +AM++LYK   +NP+ GC PILLQ+P+F A+Y V+  S+E+RHAPF  WI D
Sbjct: 294 D-DRQKMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLMESVELRHAPFMLWIID 352

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNW 522
           L+  DP                     + P++M +SMF+  +M P  P  D  Q  ++ W
Sbjct: 353 LSVQDPYY-------------------VMPVLMGISMFVMQRMQPMAPTMDPMQQKMMQW 393

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           MPVVF      FPAGL++YW   N+++I QQ +I 
Sbjct: 394 MPVVFTVFFLWFPAGLVLYWLVGNIVAITQQKIIY 428


>gi|154174780|ref|YP_001408435.1| putative inner membrane protein translocase component YidC
           [Campylobacter curvus 525.92]
 gi|112802923|gb|EAU00267.1| inner membrane protein OxaA [Campylobacter curvus 525.92]
          Length = 518

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 127/573 (22%), Positives = 240/573 (41%), Gaps = 66/573 (11%)

Query: 1   MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M++        +A  LS +   A+  F++   +    N   N+      N   +S +A +
Sbjct: 1   MDKLSTQKRVLIATLLSFLFFIAYDYFFIPKSMPIEQNRSVNVAQNSS-NATPSSQSANV 59

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL--RGYHLDVSSNSPIVTLLSPSN 115
             +   + +     ++K  +    I+  G +     L  + Y      N   +T +SP  
Sbjct: 60  TANTDPSQNTKILAKIKGQNYEAQIDELG-RISKFYLTEKKY-ETADGNKTELTGISP-- 115

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISL 174
                   L+   +   I        +     ++   +    +      + +   + I+ 
Sbjct: 116 ------LPLEMRFSDAAINDQAFRVSYTADISELDASSGAKTINLTQNLDGLSVTKKITF 169

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
                +++   ++ N                +P  + +++ +    +    DK  + +  
Sbjct: 170 YPDGRYEVEVNLSKNVE-------YFITPGFRPNISVDSYTIHGALLMHADDKLSILEDD 222

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
                   S+          SD+Y+             + F           +  +    
Sbjct: 223 DLDGTEKFSDIT----VAAASDRYY------------TALFYSFGKPLDVVMSTDAKKNA 266

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
            I   ++       + G K+   +   +     PR   +I++GWF FIAKPMF  + + +
Sbjct: 267 IIFVKQNGNFKTSGYIGPKDHKILSSMD-----PRLTDIIEYGWFTFIAKPMFAFLDFLH 321

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
             +GN+G AI++ T+ ++++ FPL  K  +S   +K + PK+ E++ K+K   PQ L   
Sbjct: 322 KYIGNWGWAIVVLTLVIRIILFPLTYKGMLSMNKLKELAPKVKEIQAKYKG-DPQKLNTH 380

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
           M++LYK +  NP+ GC PILLQIPVFFAIY+V+  ++E++ AP+  WI DL+A DP    
Sbjct: 381 MMELYKKNGANPMGGCLPILLQIPVFFAIYRVLLNAIELKGAPWILWIHDLSAMDPFF-- 438

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533
                            I PI+M  +MF+Q +++P    D  Q  I+ ++P++F F   +
Sbjct: 439 -----------------ILPILMGATMFLQQRLTPTTFTDPMQEKIMKYLPLIFTFFFVT 481

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           FPAGL +YW  +NV S++QQ  + K+      +
Sbjct: 482 FPAGLTLYWFVNNVCSVIQQIFVNKLFEKHKKV 514


>gi|118474690|ref|YP_891743.1| putative inner membrane protein translocase component YidC
           [Campylobacter fetus subsp. fetus 82-40]
 gi|118413916|gb|ABK82336.1| inner membrane protein, 60 kDa [Campylobacter fetus subsp. fetus
           82-40]
          Length = 531

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 130/568 (22%), Positives = 243/568 (42%), Gaps = 60/568 (10%)

Query: 4   NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV----DNSYAAVLID 59
                +A  +S++    +  F++  R  ++N      +             +S  A    
Sbjct: 8   QKRLLIATVISILFFITYDYFFIPKRTVDINQTASYAEQNSSSANSAPASQDSINASDSA 67

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
               + +    V++   +   +I+  G +     L         N   ++L+S +++   
Sbjct: 68  APVTSNASKNIVQISGKTYNATIDELG-RISSFVLNESKFK-DENDKQISLVSLNHSPLP 125

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHY 178
               L+   +  ++        +   +  I    +P  +V   A N +   +TI+     
Sbjct: 126 ----LEIRFSNKDLNEEAFKVAYTSSAETIDVTKSPANVVLTQALNGVTLTKTITFYPDG 181

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
            + +   ++ N                +P    + + V    +           +  + +
Sbjct: 182 AYDLKVKLSKNED-------YFITPGFRPNVVVDGYTVHGTLMRKSDGS----LEIIEDK 230

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
           K+           L  SD+Y+             + F  +      Y    SA       
Sbjct: 231 KAKGDERFTGVDILANSDRYY------------TTLFYEVDKTLDVYIQNDSAENTLSFV 278

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
             S + +   + G K+   +   +     P    +I++GWF FIAKPMF+L+S+ +N +G
Sbjct: 279 KSSGSFSTKGYIGPKDHKILKSID-----PNLVDVIEYGWFTFIAKPMFLLLSWLHNYIG 333

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G AI+  T+ ++++ FPL  K  VS   +K++ PK+ E++ K+K  P + L   +++L
Sbjct: 334 NWGFAIVALTIVIRIVLFPLTYKGMVSMNKLKDLAPKMKEIQAKYKGDPSK-LNAHVMEL 392

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK +  NP+ GC PIL+QIP+FFAIY+V+  ++E++ AP+  WIKDLA  DP        
Sbjct: 393 YKKNGANPMGGCLPILIQIPIFFAIYRVLLNAIELKGAPWIFWIKDLAIMDPYF------ 446

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537
                        I P++M  +MFIQ K++P    D  Q  I+ ++P++F F   +FPAG
Sbjct: 447 -------------ILPVLMGATMFIQQKITPANFTDPMQEKIMKFLPLIFTFFFVTFPAG 493

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           L +YW  +N+ S+ QQ V+ K+   +  
Sbjct: 494 LTLYWFINNLCSVAQQLVVNKIFKKQKE 521


>gi|152990628|ref|YP_001356350.1| inner membrane protein translocase component YidC [Nitratiruptor
           sp. SB155-2]
 gi|151422489|dbj|BAF69993.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 528

 Score =  263 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 142/572 (24%), Positives = 257/572 (44%), Gaps = 65/572 (11%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN----QVDNSYAAV 56
           M  N    +A  +S+++ +A+  F++  + ++      + +TV Q       + NS   +
Sbjct: 5   MSTNQRVLLATIISLVVFFAYDFFFMPQQPKQPLENNASTKTVAQATTAAAPMQNSGQNM 64

Query: 57  LIDDRAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNL--RGYHLDVSSNSPIVTLLSP 113
                 ++   S + V++ +      I+  G +   + L  + Y  +  S    + L   
Sbjct: 65  KAPLGKESDKPSQQLVKITSAKFDLFIDNLG-RVSQVILEEKKYKNESGSQ---IKLFD- 119

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTI 172
              +N     L+   + N +      T +     K ++ + P  +  K         + I
Sbjct: 120 ---QNRLPKPLEIRFSDNALNEKAFKTPYRYDGPKEISLSGPTTITLKQDLGVTEVTKKI 176

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
           ++     ++   T+T +S       P      ++P    + + +    I     ++    
Sbjct: 177 TVYPDGHYEASITLTKSS-------PYYISPGYRPDVRVDGYTLHGALI----KEADDTI 225

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
              +   +  +   +        D+Y+A+             F  L +G     +K S  
Sbjct: 226 TIIEDGDAKGTEVFKKAKIAAAFDRYYAT------------LFYDLKNGLNVVVSKDSEE 273

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
              +    S       + G KE+ T+         P    +I++G+F FIAKPMF  +  
Sbjct: 274 NPILFVQGSQNFHVDGYFGPKEYETLKAIN-----PELTDVIEYGFFTFIAKPMFKALLA 328

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
            Y+L+GN+G AI++ T+ ++++ FPL  K  +S   +K++ PKI EL++K+K   PQ L 
Sbjct: 329 LYHLIGNWGWAIVVLTIIIRIILFPLTLKGMLSMQKLKDLAPKIKELQQKYKG-DPQKLN 387

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
             M+QLYK H  NP+ GC P+LLQIPVFFAIY+V+  ++E++ AP+  WI DL++ DP  
Sbjct: 388 AHMMQLYKKHGANPMGGCLPMLLQIPVFFAIYRVLLNAIELKGAPWILWITDLSSKDPYF 447

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531
                              I P++M  +M+I  K++P    D  Q  I  W+P+VF F  
Sbjct: 448 -------------------ILPVLMGATMYIHQKITPTTITDPMQKKIFEWLPIVFTFFF 488

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            +FPAGL +YW  +N++SI+QQ ++ K+  A 
Sbjct: 489 LTFPAGLTLYWFVNNILSIIQQLIVNKIFEAR 520


>gi|256548861|gb|ACU82912.1| 60 kD inner-membrane protein [Buchnera aphidicola (Acyrthosiphon
           kondoi)]
          Length = 537

 Score =  263 bits (670), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 132/520 (25%), Positives = 236/520 (45%), Gaps = 44/520 (8%)

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
           I+    A   + ++ +KN  +   +N+ G   ++ +L  Y   + S+ P   L   +   
Sbjct: 45  INTNKNAKKNTQQIFIKNNVINLVVNMYGGDIEEASLLSYKDKLYSSKPFKLL--ETAPD 102

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK-----LVFKNANNILFERTI 172
             Y A+   +          ++                 K     + + + N + + +T 
Sbjct: 103 FIYQAQSGLIGKDGPDSSEKNSRPLYSSEKNFFELKREKKELRVPIKWVSQNGVTYTKTF 162

Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVL 224
            L  + Y  +I   + N S + ++ +  G+I +           +         G     
Sbjct: 163 ILKPNSYDIQIEYDIYNPSKEILKMNMFGQIKQTVNLPKKRNIYSGNFALQTFRGAAYSS 222

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
            D    + K+  I  +   +    N W+ +  +Y+A  +IP             +  H  
Sbjct: 223 SDNKYEKYKFDMISDNKNLHVITENGWIAMLQQYFAVAWIPQNLGQN--IIYTSNLDHGI 280

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
               + ++ I +LP       + L+ G +    +     +L  P  ++ +D+GW +F+++
Sbjct: 281 VAIGYKSSLINVLPHSRSIIKSKLWIGPEIQKEM-----NLVAPNLDLTVDYGWLWFLSQ 335

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           P+F L++  +N+VGN+G +I+L T  +K + +PL K QYVS   M+ +QPKI E++EKF 
Sbjct: 336 PLFKLLTILHNVVGNWGFSIILITFIMKAVTYPLTKAQYVSMLKMRALQPKIKEIKEKFS 395

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               Q + + MI LYK   INPL G  PI +Q+P+F ++Y ++  S+E+RHAPF  WI D
Sbjct: 396 NDK-QRISQEMIVLYKKEKINPLTGFLPIFIQMPIFLSLYYMLIGSVELRHAPFLLWIHD 454

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNW 522
           L++ DP                     + PIIM L+MF   K S     +D  Q  I+N+
Sbjct: 455 LSSQDPYY-------------------VLPIIMGLTMFFIQKTSSANHVSDPFQKKIMNF 495

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           MPV+F      FP+GL++Y+  SN+++I+QQ  I+   G 
Sbjct: 496 MPVIFTAFFLWFPSGLVLYYIISNLVTIIQQKFILSNLGK 535


>gi|319957040|ref|YP_004168303.1| membrane protein insertase, yidc/oxa1 family [Nitratifractor
           salsuginis DSM 16511]
 gi|319419444|gb|ADV46554.1| membrane protein insertase, YidC/Oxa1 family [Nitratifractor
           salsuginis DSM 16511]
          Length = 535

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 129/575 (22%), Positives = 228/575 (39%), Gaps = 71/575 (12%)

Query: 4   NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP--------------NQV 49
           N    +A+ LS +I+  +       +     N                            
Sbjct: 2   NKRLMIALVLSFVILIGFSYLMPQHKATVDQNGTAAPSAQAAQHSQAPQAPAPAASGTAP 61

Query: 50  DNSYAAVLIDDRAQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
           + S         A  +S+   +  ++        +  G +     L+        +   +
Sbjct: 62  EASAGTAPAAQTAAPVSVDKVISTVETKKYTLKFDQFG-RIVSAVLKE-PKYRQDDGKPL 119

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNIL 167
            L+ P  T+      L+       I        ++  +G +   +    L        + 
Sbjct: 120 DLIDPKRTR-----PLEVRFKDPAINKAAFEVPYSASAGTLDARSGKAVLTLTQKLPQLT 174

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227
             +T++      + +   ++       R  P      H+P+   + + +  G +      
Sbjct: 175 LTKTLTFYPEGHYDLKVELS-------RKVPYFITTGHRPEADHSRYMIVRGVLVRNSKG 227

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
            +   +      +  +      + L   D+Y+ +      +  F                
Sbjct: 228 VITTVEDGK---ADQTVKIPDATILSSFDRYY-ASLFFDFKKPFSVIITPDEKKDPLPFV 283

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
              +           +     + G KE+      +     PR    I++GWF F+AKP F
Sbjct: 284 VTDS-----------SLQLHGYVGPKEWKLFESLD-----PRLTDAIEFGWFTFLAKPFF 327

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            +M   YN VGN+G AI+L T+ VKL+ FPL+ K  +S   +K++ PK+ E++EK+K  P
Sbjct: 328 RIMLAIYNFVGNWGWAIVLFTLLVKLVLFPLSYKGLLSMQKLKDLAPKMKEIKEKYKSDP 387

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            ++ Q+ M+ LYK H  NP+ GC P+LLQIPVFFA+Y+V+  + E++ AP+  WI DL+ 
Sbjct: 388 AKMNQQ-MMALYKKHGANPMGGCLPMLLQIPVFFALYRVLLNADELQGAPWILWIHDLSR 446

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVV 526
            DP                     I PI+M ++MFIQ  ++P    D  Q  I  W PV+
Sbjct: 447 QDPYF-------------------ILPILMGVTMFIQQHITPNTMTDPMQQKIFKWFPVI 487

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
             F   +FPAGL++YW  +N++SI QQ  I +++ 
Sbjct: 488 MTFFFLTFPAGLVLYWLTNNILSIAQQYYINRVYD 522


>gi|114778885|ref|ZP_01453682.1| 60 kDa inner membrane insertion protein [Mariprofundus ferrooxydans
           PV-1]
 gi|114550854|gb|EAU53420.1| 60 kDa inner membrane insertion protein [Mariprofundus ferrooxydans
           PV-1]
          Length = 435

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 134/477 (28%), Positives = 227/477 (47%), Gaps = 46/477 (9%)

Query: 87  AQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLIS 146
             F +  L+ YH+ +   +  V++LS ++   + +         + +   +    + +++
Sbjct: 5   GWFTEAELKQYHVSIEPGAANVSVLSMTDEGRSVYV-------NSGVMNRSIQKPFTVLN 57

Query: 147 GKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK 206
               T T    L   +   I   +     + Y+  I D +   +  +I      +++   
Sbjct: 58  KSANTMTLQATL---DNGLIWQRKITLAQDSYIVDIEDRILGGAGQKIYR----QVVERD 110

Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266
           P    NTF    G  A+L    L E  Y D++ SS+        W  I ++Y+ +  I +
Sbjct: 111 PDKKLNTFYEHMGPTALLN-GKLQEPDYKDLDSSSV-RMMAVGGWTAIMNRYFIAALISN 168

Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326
            E  +   FK     +              L GK     + +F G K    +    +   
Sbjct: 169 PEQDYPYYFKGDGRSYQAGVID-----SGTLDGKDNLFHSRMFLGPKSLTVLKKAGE--- 220

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
               +  I++GWF FI+KPM   + + Y  VGNFG  I+L  + +K+LFF   +K Y S 
Sbjct: 221 --GLDRSINYGWFAFISKPMHSFLLWLYTYVGNFGFCIILLVLSIKILFFWPTQKSYESM 278

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
           A M+ +QP++  ++E +     Q + + M+ LYK H +NP+ GC PI++QIPVFFA+YKV
Sbjct: 279 AAMRKLQPEMARMKELYGD-DRQKMSQEMMALYKKHKVNPMGGCLPIIIQIPVFFALYKV 337

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
           + +S+EMR APF GWI D++  DP                     + P++M +SMF+Q +
Sbjct: 338 LLMSIEMRQAPFIGWIHDMSVQDPYF-------------------VLPVLMGISMFVQQR 378

Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           ++P P D  QA ++ ++P VF      FPAGL++YW  +N +SI+QQ ++MK    E
Sbjct: 379 LNPTPPDPMQAKVMQFLPPVFTVLFLFFPAGLVLYWVVNNTLSILQQKLVMKRMNVE 435


>gi|110598560|ref|ZP_01386828.1| 60 kDa inner membrane insertion protein [Chlorobium ferrooxidans
           DSM 13031]
 gi|110339794|gb|EAT58301.1| 60 kDa inner membrane insertion protein [Chlorobium ferrooxidans
           DSM 13031]
          Length = 583

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 119/577 (20%), Positives = 232/577 (40%), Gaps = 35/577 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPR-----IEEMNNERKNIQTVKQPNQVDNSYAA 55
           M+        +AL  +I++ W  F    +      E +  E+ + Q +  P     S   
Sbjct: 1   MD--RKSLTGLALIGLIMFVWLQFMSPEKKLLKSPEAVKTEQASPQALSSPVAAAPSADT 58

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
             +   A A      V++ N     +++ KGA    L L+ +   ++       L+S  N
Sbjct: 59  FGVFATA-AGGREQLVKVDNDLFRATLSSKGATLKSLVLKKH---LNGERKPFDLVS--N 112

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVW-NLISGKILTPTTPIKLVFKNANNILFERTIS- 173
           T+N   + L        I+  +       L S + ++      + +           I+ 
Sbjct: 113 TRNGALSLLFLTREGKKIDTRDLYFSTVTLDSVRAISGKQSYAVRYHLDIAPAQAIDITY 172

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSLV 230
           L     +K+   V              ++                 Q          SLV
Sbjct: 173 LFSGDSYKVGYDVKLTGFASELAGNEYQLQWDGGLGYSEKDRKDESQSVLAGAYLGGSLV 232

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
           +   +   ++          W+ + +KY+ +  IPS+ T         + G+       +
Sbjct: 233 KLDAAKENETYREEQSGEAKWVAVRNKYFVAALIPSRRTEGIHLDGKRTAGNEFENYTAA 292

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPM 346
                   G        L+ G  ++  +            E ++D+GW +    F    +
Sbjct: 293 LKMGVPSTGTVSDDKFSLYLGPLDYNIVKSQHA-----GLEKIMDFGWDWLTRPFAEFII 347

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
             + S+    V N+G+ I++    +KL+ +PL+     S   M  +QP + EL+EK+K +
Sbjct: 348 LPVFSWMNTFVSNYGLIIIIFAFLIKLVTYPLSMASTKSMKKMSALQPVLKELQEKYKDN 407

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
           P ++    + ++YK   +NP+ GC P++LQ+P+ FA++ V   S+E+R    + W KDL+
Sbjct: 408 PAKLQS-ELGRIYKEAGVNPIGGCLPVVLQMPLLFAMFYVFRSSIELRQHS-FLWAKDLS 465

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PV 525
             D  +I      +P Y     H+ ++PI+M++++F+Q K++P      Q  ++ +M P 
Sbjct: 466 VPD--SILDFGFSIPMYGN---HIAVFPILMAVTVFMQQKITPTTQSNDQMKVMMYMFPA 520

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           + +   ++ PAGL +Y+   N+ S+ QQ  I K   A
Sbjct: 521 MMLLFFNNMPAGLGLYYLMFNIFSVAQQFYINKTTTA 557


>gi|78189983|ref|YP_380321.1| Oxa1/60 kDa IMP family protein [Chlorobium chlorochromatii CaD3]
 gi|123579125|sp|Q3ANZ7|OXAA_CHLCH RecName: Full=Inner membrane protein oxaA
 gi|78172182|gb|ABB29278.1| protein translocase subunit yidC [Chlorobium chlorochromatii CaD3]
          Length = 584

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 114/584 (19%), Positives = 219/584 (37%), Gaps = 30/584 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N    +AL  +I+  W  F    +  +   +    +       +    A     D
Sbjct: 1   MD--KNSVTGLALIAVIMLVWLQFMTPAQKVQPPQQVATTEQQVASASLPLPAALSPSTD 58

Query: 61  R----AQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
                A A   S +V + +N     +++ KGA    L L+ +        P   L    N
Sbjct: 59  TFGLFATASQGSEQVTVVENDLFRATLSSKGATLKSLVLKKHLD--GHLQPFDLLGKQKN 116

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
              +           +  +L   N                ++     A     E      
Sbjct: 117 GHLSLLFLTKDGKRIDTRDLYFRNVTLETKRTISGQERYTVRYRLDVAPQKAIEIAYLFS 176

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSLVEQ 232
               + I   V              ++                 Q          SLV+ 
Sbjct: 177 GES-YAIDYDVKLIGFGNDIAGNEYQVQWDGGLAYTEKNREEESQNALAGAYLGGSLVKL 235

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
             +  ++          +W+G+ +KY+ +  IP  +++          G+       +  
Sbjct: 236 DAAKEKEVFREEQSGEATWVGVRNKYFTAALIPQSKSNGIYLEGKREAGNHFENYLAALK 295

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMFM 348
                    +  T  ++ G  ++ T+            E ++D+GW +    F    +  
Sbjct: 296 MSLPASATEVHNTFTMYVGPLDYNTVKAQGV-----GLEKIMDFGWDWLTRPFAEWMILP 350

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           + ++    + N+GI I++    VKL+ +PL+     S   M  +QP + EL+ K+K +P 
Sbjct: 351 VFNWLNGFISNYGIIIIIFAFLVKLVTYPLSMASTKSMKKMAALQPVLQELQVKYKDNPA 410

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           ++    + ++Y+   +NP+ GC P LLQ+P+ FA++ V   S+++R    + W KDL+  
Sbjct: 411 KMQS-ELSRIYREAGVNPVGGCLPTLLQMPLLFAMFYVFRSSIQLRQ-HGFLWAKDLSVP 468

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVF 527
           D  +IF     +P Y     H+  +PI+M+ ++++Q K++P      Q  I+    PV+ 
Sbjct: 469 D--SIFDFGFAIPLYG---DHIAFFPILMAGTVYLQQKITPTAQPNEQMKIMLVLFPVMM 523

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
           +F  ++ PAGL +Y+   N+ S+ QQ  I K   A+      L 
Sbjct: 524 LFFFNNMPAGLGLYYLMFNIFSVAQQFYINKTTTADDMPKVNLA 567


>gi|242310495|ref|ZP_04809650.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239522893|gb|EEQ62759.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 538

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 129/580 (22%), Positives = 242/580 (41%), Gaps = 54/580 (9%)

Query: 4   NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
                +A+ L++     +  FY  P+        +NIQT  Q      +    + + +  
Sbjct: 11  QTRIIIAVVLALAFFVPYSYFYS-PKENATAKPSQNIQTPSQEQTTPQASIQNVSNTQNS 69

Query: 64  ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE 123
             S      +K  +    I+  G +   + L+        ++  + L S           
Sbjct: 70  TDSQEIIATIKAKNFEYKIDRLG-RITQVLLKE--EKYHKDAKDLELFSTDIANQNNPKT 126

Query: 124 LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHYLFKI 182
           L+   + + +     +T +      I     P  +       NI  E+ ++   +  ++I
Sbjct: 127 LEIRFSDSMLNQQAFSTPYKASQSDITIQDKPQSITLTQKLQNITIEKILTFYPNGYYEI 186

Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242
              V  N            +      +  N   V +G I    D ++   +  D   +S 
Sbjct: 187 KINVPQN--------YTYFLSPGMRPSVENDAYVFKGVIIKEQDNTITTIEDGD---AST 235

Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302
            N   ++S +   D+Y+             + F   ++         +          + 
Sbjct: 236 QNNFTNSSIIAAVDRYY------------TTLFFSKTNNLNISILNNAQENPMPFISANG 283

Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362
               F + G K++  +   + +        ++++G   F AKP+F+L+   Y+L GN+G 
Sbjct: 284 NIELFGYIGPKDYRLLESIDTN-----LTDVVEYGMITFFAKPLFLLLETLYDLCGNWGW 338

Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422
           AI+L T+ V+++ +PL  K  VS   +K++ PK+ E+++K+K   PQ LQ  M+ LYK H
Sbjct: 339 AIILLTLIVRIILYPLTYKGMVSMQKLKDLAPKMKEIQQKYKG-EPQKLQAHMMDLYKKH 397

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
             NP+ GC P+LLQ+PVFFAIY+V+  ++E++ A +  WI+DL+  DP            
Sbjct: 398 GANPMGGCLPLLLQMPVFFAIYRVLYNAIELKGAAWLLWIQDLSVMDPYF---------- 447

Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIY 541
                    + PI+M ++M++Q  ++P    D  Q  I  ++P++F     +FP+GL++Y
Sbjct: 448 ---------VLPILMGITMYLQQHLTPATFNDPIQEKIFKFLPLIFTIFFVTFPSGLVLY 498

Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           W  +N+ SI+QQ +I K    +                SQ
Sbjct: 499 WFVNNIFSILQQLIINKAMERKKAREIAEHKEHKHQKASQ 538


>gi|330721634|gb|EGG99650.1| Inner membrane protein translocase component YidC2C long form
           [gamma proteobacterium IMCC2047]
          Length = 345

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 117/355 (32%), Positives = 187/355 (52%), Gaps = 28/355 (7%)

Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264
              QT +       G      + + V+  + DI          +  W+ I   Y+ SV++
Sbjct: 8   DPSQTTSMGMASFLGAATQTVEDNYVKVDFDDIADEPFKE-KNTGGWVAILQHYFVSVWV 66

Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324
           P+K+     + +  S G     A   +    + PG+  T    L+AG K    +      
Sbjct: 67  PNKDQQHLYEVRKNSQGEN--IAGLVSPATIVHPGQQATVGAQLYAGPKIQDRLEQIS-- 122

Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384
              P  E+ ID+G+ +FI +P+F L+S+F++ +GN+G AI+ TT+ +KL FF L+   Y 
Sbjct: 123 ---PSLELTIDYGFLFFIGQPLFWLLSFFHSFLGNWGWAIIFTTLVIKLAFFHLSATSYK 179

Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
           S ANM+ + P++  ++E+   S  Q +  AM++LYK   INPL GC PIL+Q+PVF A+Y
Sbjct: 180 SMANMRRVGPEMARIKEQH-GSDRQKMSAAMMELYKKEKINPLGGCLPILVQMPVFIALY 238

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
            V+  S+E+R APF  WI+DLA  DP                     I PI+M ++M+ Q
Sbjct: 239 WVLMESVELRQAPFMFWIEDLAVKDPLF-------------------ILPILMGITMYGQ 279

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
             ++P P D  QA ++  +P++F F    FP+GL++YW  +N++SI QQ VI + 
Sbjct: 280 QLLNPTPPDPTQAKVMKMLPIMFTFFFLWFPSGLVLYWVANNILSIAQQWVITRK 334


>gi|268680016|ref|YP_003304447.1| membrane protein insertase, YidC/Oxa1 family [Sulfurospirillum
           deleyianum DSM 6946]
 gi|268618047|gb|ACZ12412.1| membrane protein insertase, YidC/Oxa1 family [Sulfurospirillum
           deleyianum DSM 6946]
          Length = 532

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 126/571 (22%), Positives = 233/571 (40%), Gaps = 65/571 (11%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
              +A  LS +    + +F++ P+   +     +I     P     S         +Q +
Sbjct: 10  RVIIATVLSFLFFAFYDHFFI-PKNTPLAETNSSITEQATPASSATSAPEFKEATSSQEI 68

Query: 66  SMSPRV----------ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
           + +P V          ++K  S    I+  G +     L             + L+  S 
Sbjct: 69  AQTPLVGKESQNEVIVKIKAASYEMHIDRLG-RISKFYLNESKYKDDKGE-RIQLIDASQ 126

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
                       +  ++  L + +   +++       T  +    +    I   ++I+  
Sbjct: 127 GVLPLEIRFSDKAVNSDAFLMSYSADKSVVEVSETGSTVDLT---QKLGEITLTKSITFF 183

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
               + +   ++N                 +P  A +++      I     K+    +  
Sbjct: 184 PSGKYDLHVKLSNAKD-------YFISPGFRPGAAIDSYTFHGALI----KKADDTVQTI 232

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
               +       +      +DKY+             + F  LS G          +   
Sbjct: 233 ADGDAKGDEKFSNARIAAAADKYY------------TTFFYELSSGLETVILPSKESNPL 280

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           +    +       + G KE+  +         P    ++++G+F FIAKP+F L+S+ + 
Sbjct: 281 LFVKGNDDFKLSGYVGPKEYVKLKEIH-----PGLTDVVEYGFFTFIAKPLFTLLSFLHG 335

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           + GN+G AI+  T+ V+L+ +PL  K  VS   +K + PK+ EL++K+     Q L   M
Sbjct: 336 IFGNWGWAIVAMTIIVRLVLYPLTYKGMVSMNKLKELAPKVKELQKKYGDDK-QKLNIHM 394

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LYK H  NP+ GC PILLQIPVFFA+Y+V+  ++E++ A +  W++DLA  DP     
Sbjct: 395 MELYKKHGANPMGGCLPILLQIPVFFAVYRVLQNAIELKGAAWILWVQDLAVMDPYF--- 451

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534
                           I P++M L+MF+  +++P    D  Q  I+ ++P++F F   +F
Sbjct: 452 ----------------ILPVLMGLTMFLHQRITPTTFNDPMQEKIMKYLPLIFTFFFVTF 495

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           PAGL +YW  +N+ SIVQQ  + K+   +  
Sbjct: 496 PAGLTLYWFTNNLASIVQQFYVNKLFAKKQE 526


>gi|153007343|ref|YP_001381668.1| 60 kDa inner membrane insertion protein [Anaeromyxobacter sp.
           Fw109-5]
 gi|166975849|sp|A7HIY8|OXAA_ANADF RecName: Full=Inner membrane protein oxaA
 gi|152030916|gb|ABS28684.1| 60 kDa inner membrane insertion protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 549

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 119/568 (20%), Positives = 208/568 (36%), Gaps = 35/568 (6%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
            N    +A  LSV ++  WQ  +  P+ +    +        +                 
Sbjct: 4   ENRRVLLATVLSVAVLIVWQFVFPSPKPKPQPPKPPEAAQRAEAPAAPAPGQPAAQAPAP 63

Query: 63  QAL--SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNA 119
                +    V+L       ++   G    ++ L+G           V + L     +  
Sbjct: 64  AVPQDAPEQLVKLVGDGFEATLTSHGGAVKEIVLQGEKFRRDREGKPVQIDLVRVAKEQP 123

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           Y   +         E   ++         +           +        +T  L E   
Sbjct: 124 YPLAVVATPELGGAEDAGNDVAARAPMRVVAQDARSATFEGRAGKA-TVRKTYRLTEKAY 182

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237
              +D        Q             P T    F       F+  +       +++   
Sbjct: 183 ELALDLEVQAPATQGGGIVVLYPGYMPPDTKKGGFFSGPPVEFVRPVCRAGEETERFDVD 242

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            K +      + +W G+   Y+ S   P++        K    G               L
Sbjct: 243 GKEAQEKLQGTVAWAGMDQGYFVSAVFPAQPAGTCLFAKGPVQGSGL------TALRLPL 296

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
            G S      +++G K+   +  Y ++      +       F F A+ +  +M +   LV
Sbjct: 297 DGGSAKFGFTVYSGPKDLDHLRTYGREF-ESAIDYGAMARPFAFFARLLLFVMRWLERLV 355

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+L TV VK+L +PL  K   S   M+ +QP+I++L+ K      ++   A +Q
Sbjct: 356 ANWGLAIILLTVLVKVLLYPLTAKSMQSMNEMRKLQPEIEKLKAKHGNDREKLNL-ATMQ 414

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LY+ H +NPL GC P+L+Q+P++FA+Y  +  S+E+   P + WI DL   DP       
Sbjct: 415 LYQQHKVNPLGGCLPMLIQLPIWFALYATLQTSVELYREP-FLWIHDLTVKDPLY----- 468

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMPVVFVFALSSFPA 536
                         + PI M +S ++  + SP PAD  QA ++  +MP  F   + S PA
Sbjct: 469 --------------VLPIAMGVSQYVMQRFSPQPADNAQAKMMLYFMPGFFTLLMLSVPA 514

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           GL +Y   +N++SI QQ  +M+   A  
Sbjct: 515 GLTLYIFVNNLLSIAQQQFMMRRMPAVP 542


>gi|262200044|ref|YP_003271253.1| membrane protein insertase, YidC/Oxa1 family [Haliangium ochraceum
           DSM 14365]
 gi|262083391|gb|ACY19360.1| membrane protein insertase, YidC/Oxa1 family [Haliangium ochraceum
           DSM 14365]
          Length = 672

 Score =  257 bits (655), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 131/616 (21%), Positives = 228/616 (37%), Gaps = 61/616 (9%)

Query: 1   MERN-WNYFVAIALSVIIVYAWQNFY-------------------VYPRIEEMNNERKNI 40
           ME       +A+ L+ +++  W   +                     P    +     N 
Sbjct: 1   MEEQSKRLLLAVGLAFVVMMGWTYLFPPEPPPEEVPSAEQSAGSEETPDKPALPKPTLNR 60

Query: 41  QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR--GYH 98
                 +  D + A  L + +          E +           GA      L    Y 
Sbjct: 61  ADQTGDSAGDGTGAIGLAEAQPAQRGEEQLYEFRFDKFRAVFTSHGATLKSWELLGDKYR 120

Query: 99  LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158
                ++  + L+   +      + L +      ++L  + T W +      T       
Sbjct: 121 GGEGEDAKPLDLVPLKDE-----SLLPFQLGFEGVDLLPAQTEWRVERQDETTIDFLWSY 175

Query: 159 VFKNANNILFERTIS-----LDEHYLFKIVDTVTN-NSIDQIRFSPRGRIMRHKPQTATN 212
             +     +    I        E +L ++  +V N N+ +Q             P  A+ 
Sbjct: 176 TAEQNGEEVVLFDIVKSYRLYPEQFLVELNVSVENRNASEQDLELVLSMFGYQDPNAASG 235

Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS--WLGISDKYWASVFIPSKETS 270
            +          G     E +   +E      F +     W G++  Y+     P  +T 
Sbjct: 236 GWFASIDLTWKGGCLIDEELETQTVEDLEEGAFFQKGDLAWTGLTHNYFLFAASPKNDTD 295

Query: 271 FHS--QFKYLSDGHARYQAKFSANEITILPGKSITT-TNFLFAGAKEFPTIHHYEKDLA- 326
                +   +       +A        +  G      +   + G K    +      +A 
Sbjct: 296 ARIGCRLSTVEGETGVMRADILFPAFRVRAGDPRMLRSVVAYIGPKYVDKLEAIPGVIAH 355

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            P FE  +D GWF F A P+  L+  F +LVGN+G+AI+L TV VKL   P   K   S 
Sbjct: 356 NPHFEKSVDLGWFGFFAAPLLWLLRMFESLVGNWGVAIVLLTVLVKLTLLPFTTKSMRSM 415

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
             M  ++PKI+ L++K+K    Q  Q+ M+ LY+TH +NP+AGC P+LLQ+P++FA+Y++
Sbjct: 416 KQMSKLRPKIEALQKKYKD-DRQRQQEEMMALYRTHGVNPVAGCLPMLLQMPIWFALYRM 474

Query: 447 ISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
           +  + E+ HAP   GWI DL A DP                     I PI++ + MF+Q 
Sbjct: 475 LMTAGELYHAPLVPGWIDDLTAVDPYY-------------------ILPILLVVMMFLQA 515

Query: 506 KMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           K+SP   D  Q  ++ + +P+ F       P+GL +Y   +  ++ V    I        
Sbjct: 516 KLSPTQPDSPQQKMMMYGLPLSFGVFSFFLPSGLTLYILTNTFLTAVHHIWINHSDPVAK 575

Query: 565 GLIDRLRSTFSKNYNS 580
            + +  +S      ++
Sbjct: 576 PVSEVKKSGEDAKPSA 591


>gi|78187971|ref|YP_376014.1| Oxa1/60 kDa IMP family protein [Chlorobium luteolum DSM 273]
 gi|123582400|sp|Q3B110|OXAA_PELLD RecName: Full=Inner membrane protein oxaA
 gi|78167873|gb|ABB24971.1| protein translocase subunit yidC [Chlorobium luteolum DSM 273]
          Length = 585

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 114/571 (19%), Positives = 216/571 (37%), Gaps = 28/571 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N    +AL  +I+  W  F    +              +Q     NS        
Sbjct: 1   MD--RNSVTGLALIALIMIVWLQFMSPEKKPLQQVTDAGKARTEQVAAEINSDMQPAAVP 58

Query: 61  RAQ---------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
             +         A        + N      ++ KGA    L L+ +   +  N     L+
Sbjct: 59  ATEDSFGMFAPAASGTERLTVIDNDLFHAVVSSKGATLKSLVLKKH---LDGNLKPFDLV 115

Query: 112 SPSNT---KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
           S +        +           ++    S+           T     +L      +I  
Sbjct: 116 SDAKNGALSMLFLTREGRRIDTRDLYFAGSSLDTLHTIKGKETYALSYRLALSPRQSIEV 175

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF-IAVLGDK 227
             T +  + Y       +T  S        + +     P T  N          +     
Sbjct: 176 SYTFT-GDSYRIGYDVKLTGLSGSLAGNEYQVQWDGGLPYTEKNRDDEARSAQASAYLGG 234

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
           SLV+       +S          W+ + +KY+ +  IP   T+          G+A    
Sbjct: 235 SLVKLDAEKDGRSYREEQSGDARWVAVRNKYFIAALIPEDRTAGFYLDGQKERGNAYENY 294

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
             S         + + +   L+ G  ++ T+     D+     +   DW    F    + 
Sbjct: 295 LASLKMEVPASEEVVDSRFSLYLGPLDYNTVKAQHADIEKI-MDFGWDWLTRPFAEFVIL 353

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
              ++    V N+G+ I++    +KL+ +PL+     S   M  +QP + EL++K+K +P
Sbjct: 354 PAFTWMNRFVSNYGLIIIIFAFLIKLVTYPLSTASTKSMKKMAALQPMLKELQDKYKDNP 413

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            ++    + ++YK   +NPL GC P++LQ+P+ FA++ V   S+++R    + W+KDL+ 
Sbjct: 414 AKLQS-ELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQLRQ-HGFLWVKDLSV 471

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVV 526
            D  +I      +P Y     H+ + PI+M++++F+Q K++P      Q  I+ +M P +
Sbjct: 472 PD--SILDFGFTIPMYGS---HIALLPILMAVTVFLQQKITPTAQSNDQMKIMLYMFPAM 526

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            +   ++ P+GL +Y+   NV S+ QQ  I 
Sbjct: 527 MLLFFNNMPSGLALYYLMFNVFSVAQQFYIN 557


>gi|189347989|ref|YP_001944518.1| 60 kDa inner membrane insertion protein [Chlorobium limicola DSM
           245]
 gi|254772766|sp|B3EIM7|OXAA_CHLL2 RecName: Full=Inner membrane protein oxaA
 gi|189342136|gb|ACD91539.1| 60 kDa inner membrane insertion protein [Chlorobium limicola DSM
           245]
          Length = 583

 Score =  256 bits (653), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 113/570 (19%), Positives = 219/570 (38%), Gaps = 31/570 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N    +AL  +I+  W  F    +     + R   QT    +Q      A L  D
Sbjct: 1   MD--RNSVTGLALIALIMIVWLQFMSPDKKSVQPDNRPKAQTTATVSQEKTEAPAALRSD 58

Query: 61  R-----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
                   +      V + N     +++ KGA    + L+ +   +        L+S  +
Sbjct: 59  TFGVFAEASTGAEELVTVDNELFTMTLSSKGATIKSVVLKNH---LDGQLKPFDLVSSHD 115

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
                   L+      +        V       +      +     + N       +   
Sbjct: 116 KGALSLLFLNVEGKKIDTRELYFRLVSQEKKQTLSGKKIAVVRYRLDINPQQAIDIVYRF 175

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSLVEQ 232
               +K+   V     D        ++                            SLV+ 
Sbjct: 176 SGNSYKVDYDVKLTGFDNALAGNEYQLQWDGGLAYSEKNREDESHNALAGAFLGGSLVKI 235

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
             S   ++          W+ + +KY+ +  IP  +T      +         +   S  
Sbjct: 236 DASKENQTYREEQSGEAGWVAVRNKYFVAALIPGSKTEG-IYLEGKKGSGHFEEYLASLK 294

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMFM 348
                  K  +    L+ G  ++ T+   + +      E ++D+GW +    F    +  
Sbjct: 295 MSVPSTEKVASNHFSLYIGPLDYNTVKTLDAN-----LEKIMDFGWDWLTRPFAEYVILP 349

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           + ++    + N+G+ I++  + +KL+ +PL+     S   M  +QP + EL+EK+K +P 
Sbjct: 350 VFTWMNGFISNYGLIIIIFALLIKLVTYPLSMASTKSMKKMAALQPMLKELQEKYKDNPA 409

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           ++    + ++YK   +NPL GC P++LQ+P+ FA++ V   S+++RH   + W KDL+  
Sbjct: 410 KLQS-ELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQLRH-HGFLWAKDLSVP 467

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVF 527
           D  +I      +P Y     H+ ++PI+M +++FIQ K++P      Q  ++ +  PV  
Sbjct: 468 D--SILDFGFSIPVYG---DHIAVFPILMGVTVFIQQKITPTTQSNDQMKMMLYIFPVTM 522

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +   ++ PAGL +Y+   NV S+ QQ  I 
Sbjct: 523 LLFFNNLPAGLGLYYLMFNVFSVAQQFYIN 552


>gi|291277160|ref|YP_003516932.1| inner membrane protein OxaA [Helicobacter mustelae 12198]
 gi|290964354|emb|CBG40204.1| putative inner-membrane protein, OxaA [Helicobacter mustelae 12198]
          Length = 546

 Score =  256 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 140/579 (24%), Positives = 239/579 (41%), Gaps = 66/579 (11%)

Query: 1   MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+ N N    +A+A S I +  +  ++V P+ +   N  KN  ++ Q      +  A   
Sbjct: 1   MKNNSNLRIILAVAFSFIFIAIYSRYFVTPQ-QNAKNSAKNSTSIAQNQAPVKTENASSP 59

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN----SPIVTLLSPS 114
               +A S +    ++       I+  G +   + L+                  LL   
Sbjct: 60  APILEAESKNIIARIQAKEFDLEIDSLG-RIAQVYLKNKKYTGEQELGFFEHFKILLGMM 118

Query: 115 NTKNAY----------FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA- 163
                              L+       + L    T +      I     P  LV     
Sbjct: 119 QKPKPLSKLPLFHPSELKPLEIRFANQELNLQAFKTSYEASKDFISLDKGPEVLVLTQKL 178

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
             +  ++T++  E+  + I   ++N S +         I                G I  
Sbjct: 179 PGLTVKKTLTFYENLKYDIQVELSNPSEN-------YFITNGARPMTDKENYAFNGVILE 231

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
             D  + + +  D   +      +   ++   D+Y+ ++F                +   
Sbjct: 232 KVDGKIEKIEDKD---AKELKTFDGAKFVASVDRYFTTLFYAKNSQLDVIIDSNPKNKDP 288

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
                            +       F G K++  +   +     P    ++++G   F A
Sbjct: 289 MPYV-----------HATGNLGMGGFIGPKDYQELKSVD-----PALRNVVEYGLITFFA 332

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           KP+F+L+ Y +  +GN+G AI+  TV VKL+ +PL+ K  VS   +K++ PK+ E++EK+
Sbjct: 333 KPVFLLLEYLHQYIGNWGWAIITLTVIVKLVLYPLSYKGMVSMQKLKDLTPKMKEIQEKY 392

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
           K   PQ LQ  M+QLYK H  NP+ GC P+L+QIP+F+AIY+V+  S+E++ APF  WI+
Sbjct: 393 KG-DPQKLQMHMMQLYKKHGANPMGGCLPLLIQIPIFYAIYRVLYNSVELKSAPFILWIQ 451

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNW 522
           DL+  DP                     + PI+M +SM++Q  ++P    D  QA +   
Sbjct: 452 DLSVMDPYF-------------------VLPILMGVSMYVQQALTPNTFTDPIQAKVFKM 492

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           +PVVF   L  FPAGL++YW+ +N++SI QQ  I KM  
Sbjct: 493 LPVVFTIFLIFFPAGLVLYWTINNILSIFQQLSINKMLK 531


>gi|194337886|ref|YP_002019680.1| 60 kDa inner membrane insertion protein [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|254773008|sp|B4SHH0|OXAA_PELPB RecName: Full=Inner membrane protein oxaA
 gi|194310363|gb|ACF45063.1| 60 kDa inner membrane insertion protein [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 583

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 110/574 (19%), Positives = 227/574 (39%), Gaps = 29/574 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N    +A+  +I+  W  F    +   + ++    +TV Q +    + +    D+
Sbjct: 1   MD--RNSVTGLAIIAVIMIVWLQFMSPEKKPLLPSKTVKTETVVQSDVQVPAVSIPAADN 58

Query: 61  ----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
                + +      ++++N     +++ KGA    L L+ +   +  N     L+S    
Sbjct: 59  FGVFASSSGGQEKLLKVENDLFRATLSSKGATLKSLVLKKH---LDGNRLPFDLVSNGKN 115

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
                  L       +      + V       I    +       +         I    
Sbjct: 116 GALSLLFLTREGKKIDTRDLYFSNVTLDTLRTIKGKESYAVRYHLDVAPQQAIDIIFGFT 175

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSLVEQK 233
              +K+   V              ++                 Q    +     SLV+  
Sbjct: 176 GDSYKVDYDVKLTGFASELAGNEYQVQWDGGVPFSEKNRPDEAQSALASAYLGGSLVKLD 235

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
            S  ++S          W+ + +KY+ +  IP  +++          G+       +   
Sbjct: 236 ASKEKQSYREEQSGEAQWVAVRNKYFVAALIPHGKSAGIYLDGKRETGNDFESYLAALKI 295

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMFML 349
                   +     L+ G  ++  +   +        E ++D+GW +    F    +  +
Sbjct: 296 AVPSTAGVVDDKFSLYLGPLDYNIVKAQKV-----GLEKIMDFGWDWLTRPFAEFIILPV 350

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
            S+    V N+G+ I++    +KL+ +PL+     S   M  +QP + EL+EK+K +P +
Sbjct: 351 FSWMNGFVSNYGLIIIIFAFLIKLVTYPLSMASTKSMKKMSALQPALKELQEKYKDNPAK 410

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
           +    + ++YK   +NP+ GC P++LQ+P+ FA++ V   S+E+R    + W KDL+  D
Sbjct: 411 LQS-ELGRIYKEAGVNPIGGCLPVVLQMPLLFAMFYVFRSSIELRQHS-FLWAKDLSVPD 468

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFV 528
             +IF     +P Y     H+ ++PI+M++++++Q K++P      Q  ++ +M P + +
Sbjct: 469 --SIFDFGFAIPMYGS---HIAVFPILMAVTVYLQQKITPTTQSNEQMKVMMYMFPAMML 523

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
              ++ PAGL +Y+   N+ S+ QQ  I K   A
Sbjct: 524 LFFNNMPAGLGLYYLMFNIFSVAQQFYINKTTTA 557


>gi|284036928|ref|YP_003386858.1| membrane protein insertase [Spirosoma linguale DSM 74]
 gi|283816221|gb|ADB38059.1| membrane protein insertase, YidC/Oxa1 family [Spirosoma linguale
           DSM 74]
          Length = 621

 Score =  255 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 111/608 (18%), Positives = 233/608 (38%), Gaps = 50/608 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + I L + ++  +Q     P  E+   ++         + V  +        
Sbjct: 1   MD--RNQLIGIVLILAMLVGYQLLVPKPAPEKQAAQQTQPTKPTTASGVAATDTGAANSA 58

Query: 61  RAQ----------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
           +                  A   +  + ++N  +  +   +G +  ++ L+ Y      +
Sbjct: 59  QQTPDSAALTAKFGDFATVATGQARDIVVENNDIKVTFTTQGGRVKEVVLKKYKTF---D 115

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
              + L+   +++      L+  +    ++L           G +      +    + A 
Sbjct: 116 QKPLVLIDEKSSQ----TLLELPTNQGKVDLHKLYYQTTAQGGTVSGQAQQLVFRAEVAP 171

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
               E+  ++         D   N   + I         + K +   N          + 
Sbjct: 172 GQSVEQVYTIPAEGYVLDYDLKLNGLSNAIGTGDIRFFWQDKMRQYENDLSNNRRAATIN 231

Query: 225 GDKSLVE-QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
              +  + +K ++ E +  +   E   W  I  KY+ S F+        + FK L +   
Sbjct: 232 YLTADEDFEKLTEGESNQEATVEEPVQWFTIKHKYFLSGFVARNSPLTKANFKALVNPAD 291

Query: 284 RYQAKFSANEITIL--PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF-- 339
               K +  ++T+     K+      LF G  +F  +         P F+  +  G+   
Sbjct: 292 SSVVKTAIADVTLPIADVKAGKGQYKLFYGPNDFQLLGSVA-----PEFDQNVYLGYSIL 346

Query: 340 -YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
                     + ++    + N+G+ I+   VFVKL+  PL  K Y+S A M+ +QP+++E
Sbjct: 347 KPINKYFFVPVFNFLEKFIANYGLLIIALVVFVKLILTPLTYKSYISMAKMRVLQPELNE 406

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           ++E+      +      ++LY+   ++PL+GC P+L  +P+ F+++ +    +E+R    
Sbjct: 407 MKERVGDDMAKQQS-EQMKLYQEVGVSPLSGCVPVLATMPILFSLFMLFPNLIELRQKS- 464

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADK 514
           + W  DL+  D    F  F  LPF      H+ ++ ++M++S     +   + +P     
Sbjct: 465 FLWANDLSTYD---AFITFPTLPFIGS---HLSLFTVLMTISSIAYAYYNNQTTPTQPGP 518

Query: 515 GQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
                +    P++F+F L+S+PAGL  Y+  SNV++I QQ +I +    E  +   L   
Sbjct: 519 VNMKAMSYVFPLMFMFVLNSYPAGLTFYYFVSNVVTIAQQQLI-RRFVDEDKIKAVLDEN 577

Query: 574 FSKNYNSQ 581
             KN   +
Sbjct: 578 RRKNAAGE 585


>gi|193213717|ref|YP_001999670.1| 60 kDa inner membrane insertion protein [Chlorobaculum parvum NCIB
           8327]
 gi|254772767|sp|B3QLY4|OXAA_CHLP8 RecName: Full=Inner membrane protein oxaA
 gi|193087194|gb|ACF12470.1| 60 kDa inner membrane insertion protein [Chlorobaculum parvum NCIB
           8327]
          Length = 587

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 113/573 (19%), Positives = 216/573 (37%), Gaps = 34/573 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVY-------PRIEEMNNERKNIQTVKQPNQVDNSY 53
           M+   N  +  +L  +I+  W  F          P        +K+       +    + 
Sbjct: 1   MD--RNSVIGFSLIAVIMIVWLQFMKPEQKTMLDPVPPSREMVQKDAAENAPASAAPETA 58

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
           A  L      +      + + N      ++ KGA    + L+ +   +  N     L+S 
Sbjct: 59  AESLGSFAKASTGTEQIITVDNDLFTAELSSKGATLKSMVLKKH---LDVNGKPFNLISE 115

Query: 114 SNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
            N        L       +  +L   +                +  V     +   + T 
Sbjct: 116 KNKGALSMLFLSNDGKRIDTRDLYFRSLDTKKSETVTGKEKLSVSFVLDVDASRSMQVTY 175

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSL 229
           +        I   +  N           ++                      +      L
Sbjct: 176 TFTGDSYV-IDYDLKLNGFGSTLAGNEYQLDWDGGLVYSEKDTADESHNAISSAYLGGGL 234

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
           ++    D +K           W+ + +KY+ +  IP +ET          DG        
Sbjct: 235 LKLDAKDSKKRYQEEESGKAEWVAVRNKYFVAAMIPERETEGVFLQGTKKDGVDFENYTA 294

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKP 345
           +   +      S+T    L+ G  ++ T+     D      E ++D+GW +    F    
Sbjct: 295 ALKMMIPAGQNSVTDRYRLYVGPLDYNTVRSLHVD-----LEKIMDFGWDWLTRPFAEYL 349

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +  + ++    V N+G+ I++    +K + +PL+     S   M  +QP + E++EK+K 
Sbjct: 350 ILPIFNWMNKYVTNYGLIIIIFAFLIKTVTWPLSLASTKSMKKMSALQPMMKEIQEKYKN 409

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
            P ++    + ++YK   +NPL GC P ++Q+P+ FA++ V   S+++R    + W+KDL
Sbjct: 410 DPAKLQS-ELGRIYKEAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQLRQ-HGFLWVKDL 467

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-P 524
           +  D  +I      LP Y     H+ + PI+M++++F Q K++P      Q  I+ WM P
Sbjct: 468 SVPD--SILDFGFKLPLYG---DHIALMPILMAVTVFFQQKITPTTQTNDQMKIMIWMFP 522

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            + +   ++ P+GL +Y+   NV SI QQA I 
Sbjct: 523 AMMLLFFNNMPSGLALYYLMFNVFSIAQQAYIN 555


>gi|261840125|gb|ACX99890.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori 52]
          Length = 544

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 134/588 (22%), Positives = 235/588 (39%), Gaps = 60/588 (10%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M++N N      +AIALS + +  +  F+  P       +          +   N+++A 
Sbjct: 1   MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNQTTTTKQETTNNHTATNSNTLNAFSAT 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LL 111
               +   LS      +        I+  G +   + L+     ++            L 
Sbjct: 61  QAIPQENLLS-----TISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLF 113

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           +P         EL  ++      L        L +    TP +  K        ++  + 
Sbjct: 114 NPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQD 173

Query: 172 -----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
                I     +   +   +           P   I       A        G +    D
Sbjct: 174 LGALTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYRPVADLDSYTFSGVLLENND 233

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
           K + + +  D   +       +  +L   D+Y+ ++        F +             
Sbjct: 234 KKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDSQGFEALIDS--------- 281

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
            +                    + G K++ ++         P    +I++G   F AK +
Sbjct: 282 -EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGV 335

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F+L+ Y Y  VGN+G AI+L T+ V+L+ +PL+ K  VS   +K I PK+ EL+EK+K  
Sbjct: 336 FVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKG- 394

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+
Sbjct: 395 EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLS 454

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPV 525
             DP                     I P++M  SM+    ++P    D  QA I  ++P+
Sbjct: 455 IMDPYF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKFLPL 495

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           +F   L +FPAGL++YW+ +N++S++QQ +I K+   +     + +  
Sbjct: 496 LFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQNKKE 543


>gi|189218938|ref|YP_001939579.1| preprotein translocase subunit YidC [Methylacidiphilum infernorum
           V4]
 gi|189185796|gb|ACD82981.1| Preprotein translocase subunit YidC [Methylacidiphilum infernorum
           V4]
          Length = 592

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 99/599 (16%), Positives = 234/599 (39%), Gaps = 46/599 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M  +   ++   +S++++ AWQ +  Y  + +  +  +   +    +  + +     +++
Sbjct: 1   MVMDKKGWIGFGISLVLLLAWQIYVEYRYVRQQPSPVEQTPSALPNSSEETASGQQPLNN 60

Query: 61  RAQALSMSPRVELK--------------NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
           + +  ++ P    +              N  +  +    G    ++ L+ +         
Sbjct: 61  QQENQTLGPLESFEKSPDLGKEIVHYLENDKIRVAFTSWGGAIQNIELKEHFFRGPKGKE 120

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
            + L           +  D     +  +  +               T            +
Sbjct: 121 NILLNRFDEEPLLNLSGWDSKYNLSGYQSESKEGKIFFRRDLPGGVTVERIFSLGQDYQV 180

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
           + E+ +         +     N  +                             +     
Sbjct: 181 IMEQRLINRSSLPVTLPSYRVNMGLASPIHIKEAIQNLAVNWLTLKGSRFGRIGLPDFNA 240

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVF-------------IPSKETSFHS 273
              +   Y    ++ IS+ +E   W+ + ++Y+A V              +P + + F  
Sbjct: 241 AGFLGLFYWRGPRTVISSPNEPLRWVAVKNQYFAIVVSPPSTLPPIQIEAVPVELSQFPL 300

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
           +    +      +A     E+++ P   ++     + G KE+  +            + +
Sbjct: 301 EQSSQAQVPVGIKAWAYFPELSLQPNSILSVQFKTYGGPKEYARLKKLGD-----HIDRV 355

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +++G + ++ KP+   M +F++ + N+G+ I+L T+ +K +F+PL  K   +   M+ + 
Sbjct: 356 MEYGMWGWVVKPLVWCMVHFHSFIPNYGLDIILFTLLLKGIFWPLQSKANRNMKAMQALS 415

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           PK+ EL+ ++K  P ++ Q  M++LY+ + +NPL GC P+L+QIP+F   Y ++  S+E+
Sbjct: 416 PKLKELQARYKDQPDKM-QAEMMKLYREYGVNPLGGCLPMLVQIPIFIGFYTMLQGSVEL 474

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R+   + WI+DL   D        G+          +   P+IM  +  +  +M+P  +D
Sbjct: 475 RNQS-FLWIRDLTKPDTIFHIPTLGLD---------INPLPLIMVGTQILLSRMTPQASD 524

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
             Q  +  WMPV F+    +F + L +YW+ +N+++IVQ     +     + ++ R++ 
Sbjct: 525 NPQLKVFQWMPVFFLVFFYNFASALSLYWTVNNLVTIVQTY---RNLKKPLPVLHRVKK 580


>gi|308062713|gb|ADO04601.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori Cuz20]
          Length = 547

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 137/580 (23%), Positives = 237/580 (40%), Gaps = 61/580 (10%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERK---NIQTVKQPNQVDNSY 53
           M++N N      +AIALS + +  +  F+  P        ++   N  T   PN   N++
Sbjct: 1   MDKNNNANIRLILAIALSFLFIAIYSYFFQKPNKTTTPTTKQETTNNHTATSPNNTPNAF 60

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT---- 109
           +A     +   LS      +        I+  G +   + L+            +     
Sbjct: 61  SATQAIPQENLLS-----TISFEHARIEIDSLG-RIKQVYLKDKKYLTPKEKGFLEHVSH 114

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           L +P         EL  ++      L        L +    TP +  K        ++  
Sbjct: 115 LFNPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLT 174

Query: 170 RT-----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
           +      I     +   +   +        +  P   I       A        G +   
Sbjct: 175 QDLGALTIIKTLTFYDDLHYDLQIAFKSPNKIIPSYVITNGYRPVADLDSYTFSGVLLEN 234

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
            DK + + +  D   +       +  +L   D+Y+ ++        F +           
Sbjct: 235 NDKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS------- 284

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
              +                    + G K++ ++         P    +I++G   F AK
Sbjct: 285 ---EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIL-----PMLTDVIEYGLITFFAK 336

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
            +F+L+ Y Y  VGN+G AI+L T+ V+L+ +PL+ K  VS   +K I PK+ EL+EK+K
Sbjct: 337 GVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYK 396

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
              PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI D
Sbjct: 397 G-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHD 455

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523
           L+  DP                     I P++M  SM+    ++P    D  QA +  ++
Sbjct: 456 LSIMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKLFKFL 496

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           P++F   L +FPAGL++YW+ +N++S++QQ +I K+   +
Sbjct: 497 PLLFTIFLITFPAGLVLYWTTNNILSVLQQFIINKVLENK 536


>gi|189501466|ref|YP_001960936.1| 60 kDa inner membrane insertion protein [Chlorobium
           phaeobacteroides BS1]
 gi|254772768|sp|B3EQF7|OXAA_CHLPB RecName: Full=Inner membrane protein oxaA
 gi|189496907|gb|ACE05455.1| 60 kDa inner membrane insertion protein [Chlorobium
           phaeobacteroides BS1]
          Length = 587

 Score =  254 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 118/578 (20%), Positives = 225/578 (38%), Gaps = 40/578 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVY---PRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+   N  + + L  +I+  W  F      P  E M  +   ++     +   +   AV 
Sbjct: 1   MD--KNSVIGLVLIGLIMIVWMQFMAPENKPVPERMTADVTGVEETSAKSGTGSPAVAVS 58

Query: 58  IDD------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
                     A        + + N      ++ +GA    + L+ +   +++N     L+
Sbjct: 59  AVPETFGEFSAATEGEEKLLTIDNELFTAVLSSRGATLKSMVLKKH---LNANRERFDLI 115

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPIKLVFKNANNILF 168
              N+ +   +     S   NI+  +     +     +      +  +      A     
Sbjct: 116 --KNSDSGALSLFFQTSDGKNIDTRDLYFEPSDTQKTVSLTGEESYTVTYRLDVAPEKSI 173

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
               +     ++ I   V     D +      ++        +      E   +      
Sbjct: 174 TIVYTFTGD-VYGINYDVQFTGFDGVLPGNEYQLEWDGGLLYSEKNIDDELQNSWASAYM 232

Query: 229 ---LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
              L++   SD  K           W+ +  KY+ +  IPS  T           G    
Sbjct: 233 GGSLLKLDASDPSKEYREEQSGVAGWIAVRSKYFVASLIPSSPTDGVYLKGSGKPGEKFE 292

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
               +         K+ + +  LF G  ++  +H    +      E ++D+GW +     
Sbjct: 293 DYTAALKFTLPQNEKTHSESLVLFVGPVDYNVLHSLNVN-----LEKIMDFGWDWLTRPF 347

Query: 346 MFMLMSYFYNL----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
              ++   ++L      N+G+ I++  + +KL+ +PL      S   M  +QP + EL+E
Sbjct: 348 AEYIILPIFDLLSKLTSNYGLIIIIFALLIKLVTYPLTMASTKSMKKMAALQPMMKELQE 407

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           K+K +P Q +Q  + ++YK   +NPL GC P+LLQ+P+ FA++ V   S+E+R    + W
Sbjct: 408 KYKDNP-QKMQSELGRIYKEAGVNPLGGCLPVLLQMPLLFAMFYVFRSSIELRQQS-FLW 465

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-IL 520
            KDL+  D  +I  L   +P Y     H+ ++PI+M  ++++Q K++P      Q   +L
Sbjct: 466 AKDLSLPD--SILDLGFSIPLYG---DHIALFPILMGGAVYLQQKITPTAQSNDQMKAML 520

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              PV+ +   ++ PAGL +Y+   NV SI Q   I K
Sbjct: 521 YIFPVMMLLFFNNLPAGLGLYYLMFNVFSIAQTFYINK 558


>gi|308064207|gb|ADO06094.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori Sat464]
          Length = 547

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 137/591 (23%), Positives = 240/591 (40%), Gaps = 63/591 (10%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERK---NIQTVKQPNQVDNSY 53
           M++N N      +AIALS + +  +  F+  P        ++   N  T   PN   N++
Sbjct: 1   MDKNNNANIRLILAIALSFLFIAIYSYFFQKPNKTTTPTTKQETTNNHTATSPNNTPNAF 60

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT---- 109
           +A     +   LS      +        I+  G +   + L+     ++           
Sbjct: 61  SATQAIPQENLLS-----TISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVS 113

Query: 110 -LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
            L +P         EL  ++      L        L +    TP +  K        ++ 
Sbjct: 114 HLFNPKANPQISLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVL 173

Query: 169 ERT-----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
            +      I     +   +   +        +  P   I       A        G +  
Sbjct: 174 TQDLDALTIIKTLTFYDDLHYDLQIAFKSPNKIIPSYVITNGYKPVADLDSYTFSGVLLE 233

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
             DK + + +  D   +       +  +L   D+Y+ ++        F +          
Sbjct: 234 NNDKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS------ 284

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
               +                    + G K++ ++         P    +I++G   F A
Sbjct: 285 ----EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFA 335

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           K +F+L+ Y Y  VGN+G AI+L T+ V+L+ +PL+ K  VS   +K I PK+ EL+EK+
Sbjct: 336 KGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKY 395

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
           K   PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI 
Sbjct: 396 KD-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIH 454

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNW 522
           DL+  DP                     I P++M  SM+    ++P    D  QA +  +
Sbjct: 455 DLSIMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKLFKF 495

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           +P++F   L +FPAGL++YW+ +N++S++QQ +I K+   +     + +  
Sbjct: 496 LPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQSKKE 546


>gi|322379151|ref|ZP_08053547.1| 60 kDa inner-membrane protein [Helicobacter suis HS1]
 gi|322381048|ref|ZP_08055076.1| inner membrane protein translocase component YidC [Helicobacter
           suis HS5]
 gi|321146518|gb|EFX41390.1| inner membrane protein translocase component YidC [Helicobacter
           suis HS5]
 gi|321148414|gb|EFX42918.1| 60 kDa inner-membrane protein [Helicobacter suis HS1]
          Length = 547

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 133/566 (23%), Positives = 229/566 (40%), Gaps = 47/566 (8%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
           E N  + +AI LS + +  +  F+   +            T    +  +NS    LI   
Sbjct: 17  ENNLRFILAIVLSFLFLTIYGYFFQTEKPH----------TALPTSTTNNSAPTTLIKQA 66

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI---VTLLSPSNTKN 118
           AQ    S  + + +  +   I+  G +   + L+               +  L   +   
Sbjct: 67  AQTPKSSIILTVLSKDMEIEIDSLG-RIAQVYLKDKKFTAHRQEDFLEHIKQLLGLSKPK 125

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
           +   +L  + +     L        L      TP        +              ++ 
Sbjct: 126 SALEKLPLLGSNALKPLELRFVDSTLNQEAFNTPYIASTQTLQIDKAPKTVVLTQSLKNL 185

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
             K + T   N    +R   +     +     +N                L+  +   +E
Sbjct: 186 NVKKILTFYPNLTYDLRVELKPTHPMNLAYVLSNGSRPIADADGYAFHGVLLGTQDHKLE 245

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
           K       ++         + ++ FI S +  + S F               + +     
Sbjct: 246 KIEDGKAKQT-------QTFKSTTFIASVDRYYTSLFFTKDSPLDAIIEAQPSKDPLPFV 298

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
                     + G K+   +         P    +I++G   F A+P+F+L+ Y +    
Sbjct: 299 SLKGNAILHGYIGPKDHRLLEQIS-----PMLTKVIEYGVITFFARPVFLLLDYLHTYTH 353

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G AI+L T+ V+++ +PL+ K  VS   +K++ PK+ EL+EK+ +S PQ LQ  M+QL
Sbjct: 354 NWGWAIILLTLIVRIILYPLSYKGMVSMQKIKDLAPKMKELQEKY-KSDPQKLQMHMMQL 412

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK H  NPL GC PILLQIPVFFAIY+V+  ++E++ A +  WI DL+  DP        
Sbjct: 413 YKKHGANPLGGCLPILLQIPVFFAIYRVLYNAVELKSAGWMLWIHDLSLMDPYF------ 466

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537
                        I P++M +SM+ Q  ++P    D  QA I   +P+ F   L +FPAG
Sbjct: 467 -------------ILPLLMGISMYAQQALTPSTITDPTQAKIFKMLPLFFTIFLITFPAG 513

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563
           L++YW+ +N+ SI+QQ +I +M   +
Sbjct: 514 LVLYWTTNNIFSIIQQWLINQMLSKK 539


>gi|298735584|ref|YP_003728107.1| preprotein translocase subunit YidC [Helicobacter pylori B8]
 gi|298354771|emb|CBI65643.1| preprotein translocase YidC subunit [Helicobacter pylori B8]
          Length = 544

 Score =  253 bits (645), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 135/589 (22%), Positives = 231/589 (39%), Gaps = 66/589 (11%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             N N  +AIALS + +  +  F+  P        ++           +   A       
Sbjct: 4   NNNTNLILAIALSFLFIALYSYFFQKPNKPTTQTTKQETTNNHTATSPNAPNAFSATQTI 63

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNT 116
            Q   +S    +        I+  G +   + L+     ++            L S    
Sbjct: 64  PQENLLSA---ISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSSKEN 118

Query: 117 KNAYFAELDYVSTANNIEL----------PNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
                 EL  ++      L            +       S   L P   + L        
Sbjct: 119 MQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGAFT 178

Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           + +     D+ HY  KI     NN        P   I       A        G +    
Sbjct: 179 IIKTLTFYDDLHYDLKIAFKSPNN------LIPSYVITNGYRPVADLDSYTFSGVLLENN 232

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           DK + + +  D   +       +  +L   D+Y+ ++        F +            
Sbjct: 233 DKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS-------- 281

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
             +                    + G K++ ++         P    +I++G   F AK 
Sbjct: 282 --EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKG 334

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F+L+ Y Y  VGN+G AI+  T+ V+++ +PL+ K  VS   +K + PK+ EL+EK+K 
Sbjct: 335 VFVLLDYLYQFVGNWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKG 394

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
             PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL
Sbjct: 395 -EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDL 453

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMP 524
           +  DP                     I P++M  SM+    ++P    D  QA I  ++P
Sbjct: 454 SIMDPYF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKFLP 494

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           ++F   L +FPAGL++YW+ +N++S++QQ +I K+   +  +  + +  
Sbjct: 495 LLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRMHAQNKKE 543


>gi|15646059|ref|NP_208241.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori 26695]
 gi|38502836|sp|O25989|OXAA_HELPY RecName: Full=Inner membrane protein oxaA
 gi|2314626|gb|AAD08491.1| 60 kDa inner-membrane protein [Helicobacter pylori 26695]
          Length = 547

 Score =  253 bits (645), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 129/587 (21%), Positives = 228/587 (38%), Gaps = 55/587 (9%)

Query: 1   ME---RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+    N    +AIALS + +  +  F+  P        ++            N+  A  
Sbjct: 1   MDKNNNNLRLILAIALSFLFIALYSYFFQKPNKTTTQTTKQETTNNHTATS-PNAPNAQH 59

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLS 112
                     +    +        I+  G +   + L+     ++            L S
Sbjct: 60  FSTTQTTPQENLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFS 117

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT- 171
                     EL  ++      L        L +    TP +  K        ++  +  
Sbjct: 118 SKENAQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDL 177

Query: 172 ----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227
               I     +   +   +           P   I       A        G +    DK
Sbjct: 178 GTLSIIKTLTFYDDLHYDLKIAFKSPNNLIPSYVITNGYRPVADLDSYTFSGVLLENSDK 237

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
            + + +  D   +       +  +L   D+Y+ ++        F +              
Sbjct: 238 KIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS---------- 284

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
           +                    + G K++ ++         P    +I++G   F AK +F
Sbjct: 285 EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVF 339

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
           +L+ Y Y  VGN+G AI+L T+ V+++ +PL+ K  VS   +K + PK+ EL+EK+K   
Sbjct: 340 VLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-E 398

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
           PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+ 
Sbjct: 399 PQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSI 458

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVV 526
            DP                     I P++M  SM+    ++P    D  QA I   +P++
Sbjct: 459 MDPYF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLL 499

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           F   L +FPAGL++YW+ +N++S++QQ +I K+   +  +  + +  
Sbjct: 500 FTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 546


>gi|119358504|ref|YP_913148.1| protein translocase subunit yidC [Chlorobium phaeobacteroides DSM
           266]
 gi|166975858|sp|A1BJZ7|OXAA_CHLPD RecName: Full=Inner membrane protein oxaA
 gi|119355853|gb|ABL66724.1| protein translocase subunit yidC [Chlorobium phaeobacteroides DSM
           266]
          Length = 579

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 110/570 (19%), Positives = 223/570 (39%), Gaps = 31/570 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N    +AL  +I+  W  F       ++  E    +          + AA + D+
Sbjct: 1   MD--RNSVTGLALIAMIMIVWLQFMSPENKPKLRTEPVKKELATSAAVTPGAPAAPVGDN 58

Query: 61  ----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS-PSN 115
                  +        ++N     +++ KGA    + L+ +   +  +     L+S P  
Sbjct: 59  LGIFATASAGAEQLQTVENDLFKVTLSSKGATIKSVVLKQH---LDGHLKQFNLVSTPDK 115

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
              +     +     +  +L   +   + +     T    I+ V           T    
Sbjct: 116 GALSLLFLSNDGKKIDTRDLYFRSVSLDTLKTLSGTERYVIRYVLDVTPEKAIAITYGFS 175

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSLVEQ 232
            +  ++I   V     +        ++                            S V+ 
Sbjct: 176 GNS-YRIDYDVKLTGFNNALVGNEYQVQWDGGLVYSEKNREDESHNALAGSYLGGSFVKL 234

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
             S  ++S          W+ + +KY+ +  IP   T         +          +  
Sbjct: 235 DASKDKESYREEQSGLAKWVALRNKYFVAAIIPRGATEGIFLEGRKTAATHFEDYLAALK 294

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMFM 348
                     + +  L+ G  ++ T+     D      E ++D+GW +    F    +  
Sbjct: 295 MSVSATEPVSSNSYSLYVGPLDYNTVKSLGVD-----LEKIMDFGWDWLTRPFAEYIILP 349

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
             ++    V N+G+ I++  + +KL+ +PL+     S   M  +QP + EL+EK+K +P 
Sbjct: 350 AFTWMNRFVSNYGLIIIIFALLIKLVTYPLSMASTKSMKKMSALQPALKELQEKYKDNPA 409

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           ++    + ++YK   +NPL GC P++LQ+P+ FA++ V   S+++RH   + W KDL+  
Sbjct: 410 KLQS-ELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQLRH-HGFLWAKDLSVP 467

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVF 527
           D  +I      +P Y     H+ ++PI+M++++F+Q K++P      Q  I+ +M P + 
Sbjct: 468 D--SILDFGFAIPMYG---DHIAVFPILMAITVFVQQKITPTAQSNEQMKIMMYMFPAMM 522

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +   ++ PAGL +Y+   N+ S+ QQ  I 
Sbjct: 523 LLFFNNLPAGLGLYYLMFNIFSVAQQFYIN 552


>gi|317010178|gb|ADU80758.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori India7]
          Length = 546

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 138/593 (23%), Positives = 233/593 (39%), Gaps = 68/593 (11%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M++N N      +AIALS + +  +  F+  P        ++           +   A  
Sbjct: 1   MDKNNNTNTRLILAIALSFLFITLYSYFFQKPNKTTTQTTKQETANNHTTTSPNTPNAFN 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLS 112
                 Q   +S    +        I+  G +   + L+            +     L S
Sbjct: 61  ATQTIPQENLLS---TISFEHARIEIDSLG-RIKQVYLKDKKYLTPKEKGFLEHVGHLFS 116

Query: 113 PSNTKNAYFAELDYVSTANNIEL----------PNSNTVWNLISGKILTPTTPIKLVFKN 162
           P         EL  ++      L            +       S   L P   + L    
Sbjct: 117 PKANPQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDL 176

Query: 163 ANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
               + +     D+ HY  +I    +NN        P   I       A        G +
Sbjct: 177 GALTIIKTLTFYDDLHYDLQIAFKSSNN------IIPSYVITNGYRPVADLDSYTFSGVL 230

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281
               DK + + +  D   +       +  +L   D+Y+ ++        F +        
Sbjct: 231 LENNDKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTENPQGFEALIDS---- 283

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
                 +                    + G K++ ++         P    +I++G   F
Sbjct: 284 ------EIGTKNPLGFISFKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITF 332

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
            AK +F L+ Y Y  VGN+G AI+L T+ V+L+ +PL+ K  VS   +K + PK+ EL+E
Sbjct: 333 FAKGVFALLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELTPKMKELQE 392

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           K+K   PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  W
Sbjct: 393 KYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILW 451

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMIL 520
           I DL+  DP                     I P++M  SM+    ++P    D  QA I 
Sbjct: 452 IHDLSIMDPYF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIF 492

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
             +P++F   L +FPAGL++YW+ +N++S++QQ +I K+   +     + +  
Sbjct: 493 KLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQNKKE 545


>gi|261838725|gb|ACX98491.1| inner membrane protein [Helicobacter pylori 51]
          Length = 546

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 134/590 (22%), Positives = 236/590 (40%), Gaps = 62/590 (10%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT--VKQPNQVDNSYA 54
           M++N N      +AIALS + +  +  F+  P        ++          +   N+++
Sbjct: 1   MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNKTTTPTTKQETTNNHTATNSNTPNAFS 60

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----- 109
           A     +   LS      +        I+  G +   + L+     ++            
Sbjct: 61  ATQTIPQENLLSA-----ISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSH 113

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           L +P         EL  ++      L        L +    TP +  K        ++  
Sbjct: 114 LFNPKANPQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLT 173

Query: 170 RT-----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
           +      I     +   +   +           P   I       A        G +   
Sbjct: 174 QDLGALAIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYRPVADLDSYTFSGVLLEN 233

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
            DK + + +  D   +       +  +L   D+Y+ ++        F +           
Sbjct: 234 NDKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS------- 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
              +                    + G K++ ++         P    +I++G   F AK
Sbjct: 284 ---EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAK 335

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
            +F+L+ Y Y  VGN+G AI+L T+ V+L+ +PL+ K  VS   +K I PK+ EL+EK+K
Sbjct: 336 GVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYK 395

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
              PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI D
Sbjct: 396 G-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHD 454

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523
           L+  DP                     I P++M  SM+    ++P    D  QA I  ++
Sbjct: 455 LSIMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFL 495

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           P++F   L +FPAGL++YW+ +N++S++QQ +I K+   +     + +  
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRTHAQNKKE 545


>gi|27904529|ref|NP_777655.1| hypothetical protein bbp016 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|38502982|sp|Q89B34|OXAA_BUCBP RecName: Full=Membrane protein oxaA
 gi|27903926|gb|AAO26760.1| putative membrane protein [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 536

 Score =  252 bits (644), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 115/494 (23%), Positives = 232/494 (46%), Gaps = 44/494 (8%)

Query: 71  VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130
           + +K   L   +NL G   +   L  +   ++S+  +V L   +N    Y A+       
Sbjct: 56  IIIKTDVLKIQVNLYGGDIEKAELLHFKSKLNSSQSLVLL--DTNENFVYQAQCGITGKD 113

Query: 131 NNIELPNSNTV-----WNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFKIVD 184
               L                         + L + + + I++++   L    Y   +  
Sbjct: 114 GADNLQKHIRPLYIAKRKYYELSRHNKKIEVPLQWISKDGIIYKKIFVLKSGEYDVSVKY 173

Query: 185 TVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGV------QEGFIAVLGDKSLVEQKYSDI 237
            + N +   ++ S  G++ +        NT+          G      +   V+  +  I
Sbjct: 174 KINNITNKHLKVSMFGQLKQTINLPEDKNTYTNNFALQTFRGAAYSSDNDKYVKYSFDSI 233

Query: 238 EKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
                 N   ++  W+ +  KY+A+ +IP    S+ +     S G    +  + +  I I
Sbjct: 234 VNKEKKNIVVTHSGWVAMLQKYFATSWIPDN--SYLNTMYIGSSGDNLAEIGYYSRPIDI 291

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
            P  +I+ ++ L+ G +    +     +      ++ +D+GW +F+++P+F L+++ YN+
Sbjct: 292 FPHSTISLSSKLWIGPEIQNKMAVIASN-----LDLTVDYGWLWFLSQPLFKLLNFLYNI 346

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
            GN+G++I+L T  +K + FPL K Q+ + A ++ +QPKI+ +++   ++  Q + + ++
Sbjct: 347 CGNWGVSIILITFIIKGITFPLTKSQFKTMAKIRKLQPKINYIKK-KFKNNNQKISEEIM 405

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            LYKT  +NPL GC+P+ +Q+P+F A+Y ++  S+E+RHAPF+ WI DL+  DP      
Sbjct: 406 SLYKTEKVNPLGGCFPLFIQMPIFLALYYMLISSVELRHAPFFLWIHDLSDQDPFY---- 461

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535
                          + PI+M ++MF   +++P    D  Q  I+N++P++F      FP
Sbjct: 462 ---------------VLPILMGVTMFFIQRVTPSNVTDPVQKKIMNYIPILFTVFFLWFP 506

Query: 536 AGLIIYWSWSNVIS 549
           +GL++Y+  SN+++
Sbjct: 507 SGLVLYYLISNLVT 520


>gi|297380697|gb|ADI35584.1| inner membrane protein translocase component YidC [Helicobacter
           pylori v225d]
          Length = 546

 Score =  252 bits (644), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 132/588 (22%), Positives = 232/588 (39%), Gaps = 58/588 (9%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M++N N      +AIALS + +  +  F+  P        ++            NS    
Sbjct: 1   MDKNNNANIRLILAIALSFLFIAIYSYFFQKPNKTTTPTTKQETTNNHTAT---NSNTPN 57

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LL 111
             +        +    +        I+  G +   + L+     ++            L 
Sbjct: 58  AFNATQAIPQENLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLF 115

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           +P         EL  ++      L        L +    TP +  K        ++  + 
Sbjct: 116 NPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQD 175

Query: 172 -----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
                I     +   +   +        +  P   I       A        G +    D
Sbjct: 176 LGTLTIIKTLTFYDDLHYDLQIAFKSPNKIIPSYVITNGYRPVADLDSYTFSGVLLENND 235

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
           K + + +  D   +       +  +L   D+Y+ ++        F +             
Sbjct: 236 KKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALID---------- 282

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
            +                    + G K++ ++         P    +I++G   F AK +
Sbjct: 283 PEIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGV 337

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F+L+ Y Y  VGN+G AI+L T+ V+L+ +PL+ K  VS   +K I PK+ EL+EK+K  
Sbjct: 338 FVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKG- 396

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+
Sbjct: 397 EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLS 456

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
             DP                     I P++M  SM+    ++P    D  QA I  ++P+
Sbjct: 457 IMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFLPL 497

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           +F   L +FPAGL++YW+ +N++S++QQ +I K+   +     + +  
Sbjct: 498 LFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQSKKE 545


>gi|193216427|ref|YP_001997626.1| 60 kDa inner membrane insertion protein [Chloroherpeton thalassium
           ATCC 35110]
 gi|254772769|sp|B3QYV6|OXAA_CHLT3 RecName: Full=Inner membrane protein oxaA
 gi|193089904|gb|ACF15179.1| 60 kDa inner membrane insertion protein [Chloroherpeton thalassium
           ATCC 35110]
          Length = 586

 Score =  252 bits (644), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 106/602 (17%), Positives = 217/602 (36%), Gaps = 39/602 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN-----IQTVKQPNQVDNSYAA 55
           M+   N  + + L  +I+ AW       +       ++       +++   NQ+      
Sbjct: 1   MD--RNTLIGLVLIALIMMAWFQLMAPKKPLPEEKAQQERLEAVAESIDIKNQLVQDSLQ 58

Query: 56  VLIDDR------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
                +        A+    +++++      +++ KGA       + Y   ++       
Sbjct: 59  KANPTQKFGELGQFAVGEEKKIQIETDLFTATLSTKGATLRSFIQKDY---LNYKHEPFN 115

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           L+S  +   + F         N  EL                    I       +    E
Sbjct: 116 LISNEDGTLSLFFATRDGKVVNTGELYFDPKTDQKNFRISGDNKVRIPFEISTEDGRRIE 175

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
            T     +      +T        +  +    +       A      +            
Sbjct: 176 ITYIFSGNSYEFGYETNLAGFGKFVSGNEYQVVWTGGLSNAEKNVNDEATNSYAEAYLGG 235

Query: 230 VEQKYSDIEKSSISNFHESNS--WLGISDKYWASVFIPSKETSFHS-QFKYLSDGHARYQ 286
              +              S +  W+ +  KY+ +  I  +ET     +    ++      
Sbjct: 236 STLRLDASHVDETYKEQPSGNAKWVAVRSKYFVAGLISKEETEGVFMEGSRNTNDEKSVF 295

Query: 287 AKFSANEITILPGKSITTTNFL--FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
             +       LP    T  +    + G  ++  +     +      E +ID+GW +    
Sbjct: 296 EDYMVALKLKLPSDQTTVNSRFSVYIGPLKYDLVKATGSE-----LEKIIDFGWEWVTRP 350

Query: 345 PMFMLMSYFYNLVGNF----GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
               L+   +N + N     G+ I+L  +F+KL+ +PL      S   M  +QP++  ++
Sbjct: 351 FAEYLIIPIFNFLNNHVDSYGVIIILFALFIKLVTYPLTMASTKSMKKMAALQPQLKAIQ 410

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           E++K +P + LQ  +  +Y+   +NPL GC P ++Q+P+ FA++ V   S+++R    + 
Sbjct: 411 EQYKDNPEK-LQAEISGIYREAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQLRQEG-FL 468

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-I 519
           W  DL+  D  +I  L   +P Y     HV + PI+M +++F Q K++P      Q   +
Sbjct: 469 WSNDLSVPD--SILDLPFSIPLYG---DHVSVIPILMGVAVFFQQKLTPSTQTNDQMKFM 523

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           +   P + +   ++ P+GL +Y+   NV SI QQ  I +    E  ++   +S       
Sbjct: 524 MYLFPGMMLIFFNNMPSGLGLYYLMFNVFSIAQQFYINQTTETEPVVLKD-KSKQKAKPA 582

Query: 580 SQ 581
            +
Sbjct: 583 RK 584


>gi|254779961|ref|YP_003058068.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori B38]
 gi|254001874|emb|CAX30124.1| Putative inner membrane insertion protein; putative membrane
           protein; putative signal peptide [Helicobacter pylori
           B38]
          Length = 546

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 129/583 (22%), Positives = 226/583 (38%), Gaps = 52/583 (8%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             N N  +AIALS + +  +  F+  P        ++            N+  A      
Sbjct: 4   NNNTNLILAIALSFLFIAIYSYFFQKPNKTTTQTTKQETTNNHTATN-PNAPNAQNFGTT 62

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNT 116
                 +    +        I+  G +   + L+     ++            L S    
Sbjct: 63  QTIPQENLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSSKEN 120

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT----- 171
                 EL  ++      L        L +    TP +  K        ++  +      
Sbjct: 121 AQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGTLS 180

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
           I     +   +   +           P   I       A        G +    DK + +
Sbjct: 181 IIKTLTFYDDLHYDLKIAFKSPNNLIPSYVITNGYRPVADLDSYTFSGVLLENNDKKIEK 240

Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
            +  D   +       +  +L   D+Y+ ++        F +              +   
Sbjct: 241 IEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS----------EIGT 287

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
                            + G K++ ++         P     I++G   F AK +F+L+ 
Sbjct: 288 KNPLGFISLKNEADLHGYIGPKDYRSLKAIS-----PMLTDAIEYGLITFFAKGVFVLLD 342

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           Y Y  VGN+G AI+L T+ V+++ +PL+ K  VS   +K + PK+ EL+EK+K   PQ L
Sbjct: 343 YLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQKL 401

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
           Q  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+  DP 
Sbjct: 402 QAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSIMDPY 461

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFA 530
                               I P++M  SM+    ++P    D  QA I   +P++F   
Sbjct: 462 F-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTIF 502

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           L +FPAGL++YW+ +N++S++QQ +I K+   +  +  + +  
Sbjct: 503 LITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545


>gi|86160773|ref|YP_467558.1| protein translocase subunit yidC [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|123750290|sp|Q2IHR0|OXAA_ANADE RecName: Full=Inner membrane protein oxaA
 gi|85777284|gb|ABC84121.1| protein translocase subunit yidC [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 545

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 120/565 (21%), Positives = 215/565 (38%), Gaps = 32/565 (5%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
            N    +A  LSV I+  WQ  +      +                     AA       
Sbjct: 4   DNRRILLATVLSVGILILWQVIFPKKTPPKPAPTPAAEVAKPAAPAAPAPGAAAPAVPAP 63

Query: 63  QALSMSPRVELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTKNAY 120
              +    V+L       ++   G     L L    +          + L+        Y
Sbjct: 64  PPDAPEETVKLAGKGFEATLTTYGGALKSLQLEGDKFRKQEKDREVQIDLVH-VTAGQPY 122

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
              L             ++         +    + +    +  N    +      + Y  
Sbjct: 123 PLSLSASPELGGAADVTADPGARAPMRIVAKDASSVTFEGRVGNLAARKTFRVTGKPYEL 182

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
            +   +T  + +          M    ++     G    F+  +       +++   ++ 
Sbjct: 183 ALDVELTGGAGNGTVGVLYPAFMPPDTKSGGIFSGPPLDFVRPVCRAGTTTERFDLAKEG 242

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
           +        SW G+   Y+ +  +P++     +  +    G         A     + G 
Sbjct: 243 APEKLEGQVSWAGVDQHYFVAAVLPAEPVGTCTFARGPVKGAG------VAALAIPVEGG 296

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
           +   +  ++AG K+  T+  Y +       +      +F   A+ +  +M +   +V N+
Sbjct: 297 ARKLSLTVYAGPKDLDTLRGYGRGF-ESAIDYGAVAKFFALFARGLLYVMRWLEAIVRNW 355

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G+AI+L TV V+L+ FPL  K   S   M+ +QP+I++L+ KF     ++   A++QLY+
Sbjct: 356 GVAIILLTVLVRLVLFPLTYKSMQSMNEMRKLQPEIEKLKAKFGDDREKMNL-AVMQLYQ 414

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
            H +NPL GC P+LLQ+PV+FA+Y  +  S+E+   P + W+KDL A DP          
Sbjct: 415 KHKVNPLGGCLPMLLQMPVWFALYAALQTSVELYREP-FLWMKDLTAHDPYF-------- 465

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMPVVFVFALSSFPAGLI 539
                      I PI M +S F+  K+SP PAD  QA ++  + P  F   +   P GL 
Sbjct: 466 -----------ILPIAMGISSFVMQKLSPQPADNAQAKMMLYFFPGFFTVIMLFVPGGLT 514

Query: 540 IYWSWSNVISIVQQAVIMKMHGAEI 564
           +Y   +N++SIVQQ ++MK   A  
Sbjct: 515 LYIFVNNLLSIVQQQLMMKHQRAAP 539


>gi|317182655|dbj|BAJ60439.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori F57]
          Length = 546

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 134/590 (22%), Positives = 236/590 (40%), Gaps = 62/590 (10%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT--VKQPNQVDNSYA 54
           M++N N      +AIALS + +  +  F+  P        ++          +   N+++
Sbjct: 1   MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNKTTTPTTKQETTNNHTATNSNTPNAFS 60

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----- 109
           A     +   LS      +        I+  G +   + L+     ++            
Sbjct: 61  ATQTIPQENLLSA-----ISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSH 113

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           L +P         EL  ++      L        L +    TP +  K        ++  
Sbjct: 114 LFNPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLT 173

Query: 170 RT-----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
           +      I     +   +   +           P   I       A        G +   
Sbjct: 174 QDLGALTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYKPVADLDSYTFSGVLLEN 233

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
            DK + + +  D   +       +  +L   D+Y+ ++        F +           
Sbjct: 234 NDKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS------- 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
              +                    + G K++ ++         P    +I++G   F AK
Sbjct: 284 ---EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAK 335

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
            +F+L+ Y Y  VGN+G AI+L T+ V+L+ +PL+ K  VS   +K I PK+ EL+EK+K
Sbjct: 336 GVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYK 395

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
              PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI D
Sbjct: 396 G-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHD 454

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523
           L+  DP                     I P++M  SM+    ++P    D  QA I  ++
Sbjct: 455 LSIMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFL 495

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           P++F   L +FPAGL++YW+ +N++S++QQ +I K+   +     + +  
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRAHAQNKKE 545


>gi|317013216|gb|ADU83824.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori Lithuania75]
          Length = 546

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 135/589 (22%), Positives = 231/589 (39%), Gaps = 64/589 (10%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             N N  +AIALS + +  +  F+  P        ++            N+  A      
Sbjct: 4   NNNTNLILAIALSFLFIALYSYFFQKPNKTTTQTTKQETTNNHTATS-PNAPNAQNFGTT 62

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNT 116
                 +    +        I+  G +   + L+     ++            L +P   
Sbjct: 63  QAISQENLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLFNPKAN 120

Query: 117 KNAYFAELDYVSTANNIEL----------PNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
                 EL  ++      L            +       S   L P   + L        
Sbjct: 121 PQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLNTLT 180

Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           + +     D+ HY  KI    +NN        P   I       A        G +    
Sbjct: 181 IIKTLTFYDDLHYDLKIAFKSSNN------IIPSYVITNGYRPVADLDSYTFSGVLLENN 234

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           DK + + +  D   +       +  +L   D+Y+ ++        F +            
Sbjct: 235 DKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDSQGFEALIDS-------- 283

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
             +                    + G K++ ++         P    +I++G   F AK 
Sbjct: 284 --EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKG 336

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F+L+ Y Y   GN+G AI+L T+ V+L+ +PL+ K  VS   +K + PK+ EL+EK+K 
Sbjct: 337 VFVLLDYLYQFAGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKG 396

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
             PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL
Sbjct: 397 -EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDL 455

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMP 524
           +  DP                     I P++M  SM+    ++P    D  QA I   +P
Sbjct: 456 SIMDPYF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLP 496

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           ++F   L +FPAGL++YW+ +N++S++QQ +I K+   +  +  + +  
Sbjct: 497 LLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545


>gi|189485052|ref|YP_001955993.1| protein translocase subunit YidC [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|254778169|sp|B1GZ50|OXAA_UNCTG RecName: Full=Inner membrane protein oxaA
 gi|170287011|dbj|BAG13532.1| protein translocase subunit YidC [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 519

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 119/558 (21%), Positives = 224/558 (40%), Gaps = 50/558 (8%)

Query: 4   NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD--R 61
             N  + + LS   V+ W  F+  P  +      +   TV       N +    +++   
Sbjct: 2   QKNSILFVTLSAFTVFIWYFFFAQPSEQSYRQMMQLQNTVAVSESGVNKFKNADLNEFQI 61

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
               +    + ++       +  KG      +++        N   V L+ P +      
Sbjct: 62  DDIYAKEEHINIETEQYKAVLTNKGGGVLSWSVKE------KNGQWVDLVFPESA----- 110

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181
                         P      NL    +      I   + +       +  +L + Y+  
Sbjct: 111 --------------PVMANFPNLTYKVVSKSAEKIVFEYASKEGWKITKIYNLSDLYMHN 156

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
           +  +V  N+                  +      +      V       + K        
Sbjct: 157 LNISVEKNAKTPFPQIDLKWGPGLGTDSKELKENISLTRALVYTAVKPNKLKKLKDNFEP 216

Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301
            S       W  + ++Y+   FIP     F        +   ++                
Sbjct: 217 ASL----CKWTAVDNRYFLVAFIPKNSMDFDKILFSRLEK--KHPCSVILKAAEPKDVDK 270

Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361
              +   + G K++  +  Y+        E  +D+G+F F+ K  F ++ +FY L  N+G
Sbjct: 271 KDYSVNFYLGPKDYKYLKTYDL-----GLEKTVDFGFFGFLGKIAFSILVFFYKLTHNYG 325

Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421
            AI++ T  +++L  PL  K + S+A MK +QP I +++ K+K +P Q L+  M+ +Y++
Sbjct: 326 WAIIMLTTIIQILVLPLTLKSFKSSAAMKRVQPVIKDIQTKYKDNP-QRLKAEMLNIYQS 384

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
             +NPL GC P+LLQ+P+F+A + ++  + E+R+  +  W+KDL+AAD    F  F +  
Sbjct: 385 QKVNPLGGCLPMLLQLPIFWAFFTMLRNAYELRNEGWILWVKDLSAADQFMQFGSFNL-- 442

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541
                     + P++M + MF Q +M+   +D  Q  I+  MPV+F F   SFP+GL++Y
Sbjct: 443 ---------NLLPLMMGIGMFFQQRMTTVTSDPTQRKIMYIMPVIFTFMFWSFPSGLVLY 493

Query: 542 WSWSNVISIVQQAVIMKM 559
           W  +++IS+++Q  IMK 
Sbjct: 494 WLTNSLISMIEQYFIMKK 511


>gi|317179626|dbj|BAJ57414.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori F30]
          Length = 546

 Score =  252 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 134/590 (22%), Positives = 237/590 (40%), Gaps = 62/590 (10%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT--VKQPNQVDNSYA 54
           M++N N      +AIALS + +  +  F+  P        ++          +   N+++
Sbjct: 1   MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNQTTTQTTKQETTNNHTATNSNTPNAFS 60

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----- 109
           A     +   LS      +        I+  G +   + L+     ++            
Sbjct: 61  AAQTIPQENLLSA-----ISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSH 113

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           L +P         EL  ++      L        L +    TP +  K        ++  
Sbjct: 114 LFNPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLT 173

Query: 170 RT-----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
           +      I     +   +   +           P   I       A        G +   
Sbjct: 174 QDLGALTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYKPVADLDSYTFSGVLLEN 233

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
            DK + + +  D   +       +  +L   D+Y+ ++        F +           
Sbjct: 234 NDKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS------- 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
              +                    + G K++ ++         P    +I++G   F AK
Sbjct: 284 ---EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAK 335

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
            +F+L+ Y Y  VGN+G AI+L T+ V+L+ +PL+ K  VS   +K I PK+ EL+EK+K
Sbjct: 336 GVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYK 395

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
              PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI D
Sbjct: 396 G-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHD 454

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523
           L+  DP                     I P++M  SM+    ++P    D  QA I  ++
Sbjct: 455 LSIMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFL 495

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           P++F   L +FPAGL++YW+ +N++S++QQ +I K+   +  +  + +  
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545


>gi|237750081|ref|ZP_04580561.1| inner-membrane protein [Helicobacter bilis ATCC 43879]
 gi|229374268|gb|EEO24659.1| inner-membrane protein [Helicobacter bilis ATCC 43879]
          Length = 577

 Score =  252 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 131/605 (21%), Positives = 248/605 (40%), Gaps = 91/605 (15%)

Query: 1   MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK-------------- 44
           M++  N    +A+A+S  ++  W  F+      +       +                  
Sbjct: 1   MDKQSNLRLILAVAISFAVIVIWSKFFAPEPPVKEPQAANQVTDSSVKSENEVIPQSAIN 60

Query: 45  ------QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR--G 96
                  P    N+   +     +        V +++      I++ GA    + L+   
Sbjct: 61  TNANIIAPPSSTNASNTMKGIPTSVPQIKENLVRIESQDFDMDIDVSGA-ITQVYLKADK 119

Query: 97  YHL----------------DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140
           Y                      N  +  L  P    N     L  + T  N    +S  
Sbjct: 120 YTQPHQEGIFTHIGRLFGMVSGENKKLDRL--PLLADNVPLYPLQMIFTDENYRKKSSQI 177

Query: 141 VWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPR 199
            ++     I+       L       +++ ++ I+++ +  +K+   ++  +        +
Sbjct: 178 KYSTDRSHIVLTDKAETLTLTQDLGDLVVKKIITIEPNMTYKVQIELSKQT--------Q 229

Query: 200 GRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYW 259
             I       A +   V  G +    + S+ + +  D +    +   +   ++   D+Y+
Sbjct: 230 YLISNGMRPNADSESYVFHGVVLQKNNGSIEKIEDGDAKNEGEN--FDDALYVASVDRYY 287

Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319
            +  + + +          S G                   S       + G K++  + 
Sbjct: 288 -TSLLFNIDKPLSLSIGAFSKGLPTPFINV----------SSANEVLHGYIGPKDYRVLE 336

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379
                   P    ++++G   F AK +F L+ + Y  +GN+G+AI++ T+ ++++ FPL+
Sbjct: 337 SIN-----PHLTSVVEYGRITFFAKYIFALLDFLYQYIGNWGVAIIVLTIIIRIILFPLS 391

Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
            K  V    +K + PK+ +L+ K+K   PQ LQ +M++LYK H  NPL GC P++LQIPV
Sbjct: 392 FKGMVGMQKLKELAPKMKDLQAKYKG-DPQKLQASMMELYKKHGANPLGGCLPLVLQIPV 450

Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           FFAIY+V+  ++E+++AP   WI DL+  DP                     + P++M  
Sbjct: 451 FFAIYRVLYNAVELKNAPLMWWIHDLSVMDPYF-------------------VLPLLMGF 491

Query: 500 SMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           SM++Q  ++P    D  Q  +  W+PV+F F L +FPAGLI+YW+ +N+ISI+QQ  I K
Sbjct: 492 SMYLQQALTPTTFTDPMQEKVFKWLPVIFTFFLITFPAGLILYWTINNLISIIQQLAINK 551

Query: 559 MHGAE 563
           M  ++
Sbjct: 552 MLESK 556


>gi|291333888|gb|ADD93569.1| putative inner membrane protein translocase component YidC
           [uncultured marine bacterium MedDCM-OCT-S04-C293]
          Length = 526

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 129/556 (23%), Positives = 239/556 (42%), Gaps = 56/556 (10%)

Query: 17  IVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS-------- 68
           ++  W      P  EE  +E     +   P    +   + + +  + A S +        
Sbjct: 1   MLINWN----PPAQEEAISENTLNNSEYLPTNPISKPNSFVDESSSFAESSNITSLICGA 56

Query: 69  -PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127
              VE+ N +    I+L   Q     L  Y L+++  +   TLL     K  YF +  +V
Sbjct: 57  EETVEVSNENQKLEISLSSGQIIKSELLNYPLEINGQAN--TLLFNKCGKENYFLDGGFV 114

Query: 128 STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVT 187
            +  +     +          +      ++++ +  N     + ISL E++     +   
Sbjct: 115 VSGMSNAPEGNYF------SVLSKSEDSVEIIRRLPNGSTHSKKISLGENFRINFEEEFF 168

Query: 188 NNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG---DKSLVEQKYSDIEKSSISN 244
           N    ++  +P  +I R   +T + + G+     +        S   + Y     S I  
Sbjct: 169 NGEEVEVSVAPYAKINRSSEKTISGSGGIFTQPSSWAYLGPAFSYDGENYDKRSFSEIEE 228

Query: 245 FHE----SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
                  S  W+ +   Y+ +  +P++ ++   Q K  +     +   F      + P  
Sbjct: 229 VEFRTSTSGGWISMIQHYFLTSLLPNQSSNSLLQGK-KNKNDGSFSVGFVEETKKVAPRN 287

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
           SI      ++G K    +     DL  P+  + ID+G+ Y+I +P+F +M+     + ++
Sbjct: 288 SIKNEYSAYSGPKIKGNL-----DLMHPKLGLAIDYGFLYWIGQPIFWVMNLINQAISSW 342

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G +I+L TV +K+  +PL+   Y +   M+ +QPK+ EL+E++     Q + + M+ LY 
Sbjct: 343 GWSIVLVTVLIKIFLWPLSYVAYKNMGKMRQLQPKLKELQERYGD-DRQAMSREMMALYS 401

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
              +NP  GC P+LLQ+P F A Y V+  ++E+RHAPF  WI DL+  DP          
Sbjct: 402 KEKVNPALGCLPMLLQMPFFLAFYWVLIETVELRHAPFMFWIVDLSVRDPLF-------- 453

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFPAGL 538
                      I P++   +M++   + P PA  D  QA I  +MP++F    + FPAGL
Sbjct: 454 -----------ILPLLNMGAMYLMQLLQPQPAGVDPMQARIFKFMPIIFGVLFAFFPAGL 502

Query: 539 IIYWSWSNVISIVQQA 554
           ++YW  ++++S +Q  
Sbjct: 503 VLYWLVNSLVSALQML 518


>gi|21672847|ref|NP_660912.1| Oxa1/60 kDa IMP family protein [Chlorobium tepidum TLS]
 gi|38503043|sp|Q8KGG2|OXAA_CHLTE RecName: Full=Inner membrane protein oxaA
 gi|21645895|gb|AAM71254.1| oxa1/60kDa IMP family protein [Chlorobium tepidum TLS]
          Length = 590

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 115/583 (19%), Positives = 216/583 (37%), Gaps = 35/583 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRI---EEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+   N  +  AL   I+  W  F    +    E+    R+ +Q          S A   
Sbjct: 1   MD--RNSVIGFALIAAIMIVWLQFMKPEQKLGLEKAAASREAVQKTPAAALPAPSAAVAA 58

Query: 58  IDD-------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
                        ++     + + N     +++ KGA    L L+ +   +  N     L
Sbjct: 59  AARADSLGSFAQASVGTEKTITVSNDLFTATLSSKGATLKSLVLKKH---LDGNRKPFNL 115

Query: 111 LSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           +S S+        L       +  +L   +                +  V         +
Sbjct: 116 ISASDKGALSMLFLSSDGKKIDTRDLYFRSLDAKTTETVTGKEKLSVSYVLDVDATRSIQ 175

Query: 170 RTISLDEHYLFKIVDTVTNN--SIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227
            T +          D   N   S                               +     
Sbjct: 176 ITYTFTGDSYVVDYDLKLNGFGSSIAGNEYQLDWDGGLNYSEKDQVDESHNAIASAYLGG 235

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
           S+V+    D +K+          W+ + +KY+ +  +P + T          DG      
Sbjct: 236 SVVKLDAKDAKKTWQDEESGKAQWVAVRNKYFVAAIMPQRTTDGIYLHGTKKDGSDFKNY 295

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIA 343
             +         +S+     L+ G  ++ T+     D      E ++D+GW +    F  
Sbjct: 296 VAALKMSFPAGQQSVDDHYRLYVGPLDYNTVKSLNAD-----LEKIMDFGWDWLTRPFAE 350

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  + ++    V N+G+ I++    +KL+ +PL+     S   M  +QP + EL+EK+
Sbjct: 351 YLILPIFNWMNKYVTNYGLIIIIFAFLIKLVTWPLSLASTKSMKKMSALQPVMKELQEKY 410

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
           K +P ++    + ++YK   +NPL GC P ++Q+P+ FA++ V   S+++R    + W+K
Sbjct: 411 KDNPAKLQS-ELGRIYKEAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQLRQ-HGFLWVK 468

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW- 522
           DL+  D    F     L        H+ I PI+M++++F Q K++P      Q  I+ W 
Sbjct: 469 DLSVPDSVYHFAFKLPLYGD-----HIAIMPILMAVTVFFQQKITPNAQSNEQTKIMMWL 523

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
            P + +F  ++ PAGL +Y+   N+ S+ QQA +      E  
Sbjct: 524 FPAMMLFFFNNMPAGLALYYLMFNIFSVAQQAYMNATITDEEK 566


>gi|308183546|ref|YP_003927673.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori PeCan4]
 gi|308065731|gb|ADO07623.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori PeCan4]
          Length = 548

 Score =  251 bits (640), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 129/578 (22%), Positives = 225/578 (38%), Gaps = 50/578 (8%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
              +AIALS + +  +  F+  P        ++            N+  A          
Sbjct: 10  RLILAIALSFLFIALYSYFFQKPNKTTTQTTKQETTNNHTTTS-PNAPNAQHFSVTQTIP 68

Query: 66  SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSPSNTKNAYF 121
             +    +        I+  G +   + L+            +     L S         
Sbjct: 69  QENLLSTISFEHARIEIDSLG-RIKQVYLKDKKYLTPKEKGFLEHVGHLFSSKENAQPPL 127

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT-----ISLDE 176
            EL  ++      L        L +    TP +  K        ++  +      I    
Sbjct: 128 KELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGALTIIKTL 187

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
            +   +   +           P   I       A        G +    DK + + +  D
Sbjct: 188 TFYDDLHYDLKIAFKSPNNLIPSYVITNGYRPVADLDSYTFSGVLLENTDKKIEKIEDKD 247

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
              +       +  +L   D+Y+ ++        F +              +        
Sbjct: 248 ---AKEIKRFSNTLFLSSVDRYFTTLLFTKDSQGFEALIDS----------EIGTKNPLG 294

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
                   T   + G K++ ++         P    +I++G   F AK +F+L+ Y Y  
Sbjct: 295 FISLKNEATLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLLDYLYQF 349

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           VGN+G AI+L T+ V+L+ +PL+ K  VS   +K + PK+ EL+EK+K   PQ LQ  M+
Sbjct: 350 VGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQKLQAHMM 408

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+  DP      
Sbjct: 409 QLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSIMDPYF---- 464

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSFP 535
                          I P++M  SM+    ++P    D  QA I   +P++F   L +FP
Sbjct: 465 ---------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTIFLITFP 509

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           AGL++YW+ +N++S++QQ +I K+   +  +  + +  
Sbjct: 510 AGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 547


>gi|224372873|ref|YP_002607245.1| putative inner membrane protein translocase component YidC
           [Nautilia profundicola AmH]
 gi|223589049|gb|ACM92785.1| inner membrane protein OxaA [Nautilia profundicola AmH]
          Length = 513

 Score =  251 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 134/568 (23%), Positives = 242/568 (42%), Gaps = 63/568 (11%)

Query: 1   MERN---WNYFVAIALSVIIVYAWQNFYVYPRIEEMNN-ERKNIQTVKQPNQVDNSYAAV 56
           ME N       +A  +S     A+  F + P+ +  +    +N  TVK  +  +N+   +
Sbjct: 1   MENNGQLRRILIATVISFAFFVAYDYFVLTPQQKAASQLVEQNKTTVKTVSNTNNAADKI 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
                 + ++    V  KN      I+  G +     L+    +   N   + L++    
Sbjct: 61  SKKANNENVTTIATVSAKN--FQIKIDSLG-RISSFKLKQTKFNT-ENGKHLELVNDK-- 114

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
                 E+ + +   N          +     +      + L     +  +  + I+   
Sbjct: 115 -LPKPLEIRFENKVLNKLAFEKPVKADKTEITLNDKPQTLTLTQNLNDKEIVTKIITFYP 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
              + +   +TN +           I                G +    D +L   +  D
Sbjct: 174 DGHYDVKVKLTNPA--------IYYITPGYRPKVAVDKLTIHGLVVKKSDGTLSIIEDGD 225

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
               +I N   +  +    D+Y+ ++    K  S         +  A  +A         
Sbjct: 226 AVNETIDNAIITAGF----DRYYTTLLFSKKPYSVIVVPDNEENPVAFIKAD-------- 273

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
                       + G K   T+   +K+        ++ +G   F AK +F L+ +FY L
Sbjct: 274 -----DNREFIGYIGPKFVDTLAAIDKE-----LVDVVQYGVGTFFAKNLFFLLDWFYKL 323

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           VGN+G+AI+L  V V+L+ FPL  K  VS   +K + PK+ E+++K+ +  PQ LQ  M+
Sbjct: 324 VGNWGVAIILLVVLVRLVLFPLTYKGMVSMYKLKELAPKMKEIQQKY-KKDPQKLQMHMM 382

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LYK H  NPL GC P++LQIPVF+ IYK++  ++E++ A  + WIKDL+  DP      
Sbjct: 383 KLYKEHGANPLGGCLPLILQIPVFYGIYKLLLYAIELKGAS-FLWIKDLSVMDPYF---- 437

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535
                          I P++M +SM+I  K++P    D  Q  I  ++P++F F +++FP
Sbjct: 438 ---------------ILPVLMGVSMYIHQKLTPTNFQDPMQEKIFKFLPLIFTFMMATFP 482

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           AGL++YW+ +N++SI QQ +I ++  ++
Sbjct: 483 AGLVLYWTVNNILSIAQQWLINRIMASK 510


>gi|317178154|dbj|BAJ55943.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori F16]
          Length = 546

 Score =  251 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 134/590 (22%), Positives = 236/590 (40%), Gaps = 62/590 (10%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT--VKQPNQVDNSYA 54
           M++N N      +AIALS + +  +  F+  P        ++          +   N+++
Sbjct: 1   MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNKTTTPTTKQETTNNHTATNSNTPNTFS 60

Query: 55  AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----- 109
                 +   LS      +        I+  G +   + L+     ++            
Sbjct: 61  PTQAIPQENLLS-----TISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSH 113

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           L +P         EL  ++T     L        L +    TP +  K        ++  
Sbjct: 114 LFNPKANVQPLLKELPLLATDKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLT 173

Query: 170 RT-----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
           +      I     +   +   +           P   I       A        G +   
Sbjct: 174 QDLGALTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYRPVADLDSYTFSGVLLEN 233

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
            DK + + +  D   +       +  +L   D+Y+ ++        F +           
Sbjct: 234 NDKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS------- 283

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
              +                    + G K++ ++         P    +I++G   F AK
Sbjct: 284 ---EIGTKNPLGFISLKSEANLHGYIGPKDYLSLKAIS-----PMLTDVIEYGLITFFAK 335

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
            +F+L+ Y Y  VGN+G AI+L T+ V+L+ +PL+ K  VS   +K I PK+ EL+EK+K
Sbjct: 336 GVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYK 395

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
              PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI D
Sbjct: 396 G-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHD 454

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523
           L+  DP                     I P++M  SM+    ++P    D  QA I  ++
Sbjct: 455 LSIMDPYF-------------------ILPLLMGTSMYWHQSVTPSSVTDPMQAKIFKFL 495

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           P++F   L +FPAGL++YW+ +N++S++QQ +I K+   +     + +  
Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQNKKE 545


>gi|317014863|gb|ADU82299.1| membrane protein insertase [Helicobacter pylori Gambia94/24]
          Length = 547

 Score =  251 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 133/585 (22%), Positives = 227/585 (38%), Gaps = 65/585 (11%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
              +AIALS + +  +  F+  P        ++           +   A      +    
Sbjct: 10  RLILAIALSFLFIALYSYFFQKPNKPTTETTKQETTNNHATTSPNAPNAQHFSVTQ-TIP 68

Query: 66  SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNTKNAY 120
             S    +        I+  G +   + L+     ++            L S        
Sbjct: 69  QESLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSSKENAQPP 126

Query: 121 FAELDYVSTANNIEL----------PNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170
             EL  ++      L            +       S   L P   + L     +  + + 
Sbjct: 127 LKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGDLSIIKT 186

Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
               D+ HY  KI     NN        P   I       A        G +    DK +
Sbjct: 187 LTFYDDLHYDLKIAFKSPNN------LIPSYVITNGYRPVADLDSYTFSGVLLENNDKKI 240

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
            + +  D   +       +  +L   D+Y+ ++        F +              + 
Sbjct: 241 EKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDSQGFEALIDS----------EI 287

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
                              + G K++ ++         P    +I++G   F AK +F+L
Sbjct: 288 GTKNPLGFISLKNEADLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVL 342

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + Y Y  VGN+G AI+  T+ V+L+ +PL+ K  VS   +K + PK+ EL+EK+K   PQ
Sbjct: 343 LDYLYQFVGNWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQ 401

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+  D
Sbjct: 402 KLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWVLWIHDLSIMD 461

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFV 528
           P                     I P++M  SM+    ++P    D  QA I   +P++F 
Sbjct: 462 PYF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFT 502

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI-DRLRS 572
             L +FPAGL++YW+ +N++S++QQ +I K+   +       ++ 
Sbjct: 503 IFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQNIKE 547


>gi|332674216|gb|AEE71033.1| inner membrane protein OxaA [Helicobacter pylori 83]
          Length = 546

 Score =  251 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 132/588 (22%), Positives = 231/588 (39%), Gaps = 58/588 (9%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M++N N      +AIALS + +  +  F+  P        ++            NS    
Sbjct: 1   MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNKTTTPTTKQETTNNHTAT---NSNTPN 57

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LL 111
             +        +    +        I+  G +   + L+     ++            L 
Sbjct: 58  AFNTTQTIPQENLLSAISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLF 115

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           +P         EL  ++      L        L +    TP +  K        ++  + 
Sbjct: 116 NPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQD 175

Query: 172 -----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
                I     +   +   +           P   I       A        G +    D
Sbjct: 176 LGALTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYKPVADLDSYTFSGVLLENND 235

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
           K + + +  D   +       +  +L   D+Y+ ++        F +             
Sbjct: 236 KKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDSQGFEALIDS--------- 283

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
            +                    + G K++ ++         P    +I++G   F AK +
Sbjct: 284 -EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGV 337

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F+L+ Y Y  VGN+G AI+L T+ V+L+ +PL+ K  VS   +K I PK+ EL+EK+K  
Sbjct: 338 FVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKG- 396

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+
Sbjct: 397 EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLS 456

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
             DP                     I P++M  SM+    ++P    D  QA I  ++P+
Sbjct: 457 IMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFLPL 497

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           +F   L +FPAGL++YW+ +N++S++QQ +I K+   +     + +  
Sbjct: 498 LFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRTHAQNKKE 545


>gi|268318300|ref|YP_003292019.1| 60 kDa inner membrane insertion protein [Rhodothermus marinus DSM
           4252]
 gi|262335834|gb|ACY49631.1| 60 kDa inner membrane insertion protein [Rhodothermus marinus DSM
           4252]
          Length = 607

 Score =  251 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 118/583 (20%), Positives = 221/583 (37%), Gaps = 31/583 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPR-----------IEEMNNERKNIQTVKQPNQV 49
           M+   N  +A  L+ +I++ W  +   P             +E    ++ I   + P   
Sbjct: 1   MD--RNVVIATILTALIMFVWLWWLAPPPPPPTTAARDSLQQEDTAAQEVIAQEEAPTAP 58

Query: 50  DNSYAAVLIDDRAQALSMSPR---VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
                A  ++D   A + + R   + ++       ++ KGA    L L+ Y         
Sbjct: 59  GAPLLAGPLNDTLLAAARNGRARTITIETDLYEAQLSTKGATLVSLKLKKYKQY--DFET 116

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
            V L+  +             +   +       T     + ++      +       +  
Sbjct: 117 PVQLVDTTKPGALSLVFTTPTNHLVDTRALYFRTATTADTIRVADEPVEVAFEVPVGDGR 176

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
           + +    L   Y  ++       +                P    +         A    
Sbjct: 177 IRQVYTFLPGDYEVRLRVEQEGAATFSTIEGYELVWNGGVPFAERDRDDEARHSGAFARS 236

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF--KYLSDGHAR 284
              +E+   D +++          W+ + +K++ +V IPS ET        +        
Sbjct: 237 GGELEKITLDGQRTEEKRLAGQVDWVAVKNKFFTAVMIPSGETRGAELVGERLGEPEDPS 296

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD--LAIPRFEMLIDWGWFYFI 342
           Y   ++A  +   P         L+ G  E+  +  Y+      +       +W      
Sbjct: 297 YWEDYAARLLMPRPEDGQVDEFRLYLGPMEYFRLARYDLGLYDMVDYGWDAFEWMTRPLA 356

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
                 L +    L+GN+G+AI++  + VK+  +PL +  + + A M+ +QP+++ +REK
Sbjct: 357 KFVFIPLFTLLGRLLGNYGLAIIVFALLVKIALYPLTRASFRNMAKMRELQPELEAIREK 416

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +  +P Q  Q+A+++LY+   INPL GC P+LLQ PV  A+++    SL +R    + W 
Sbjct: 417 YADNP-QKQQEALMKLYREKKINPLGGCLPMLLQWPVLIALWQYFQQSLIVRQQ-AFLWA 474

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQAMILN 521
           KDL+A DP  I  L   +P Y      V  + ++M LSM IQM++ S       Q  IL 
Sbjct: 475 KDLSAPDP--ILHLPFKIPLYG---DFVAGFTLLMGLSMIIQMRIQSASTPSNPQTKILT 529

Query: 522 W-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           +  PV      +   + L +Y+   N+ S +QQ  I +    E
Sbjct: 530 YVFPVFIFAIFNRLSSALNLYYLCYNIFSAIQQFWINRSLEKE 572


>gi|207091817|ref|ZP_03239604.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori HPKX_438_AG0C1]
          Length = 546

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 128/579 (22%), Positives = 226/579 (39%), Gaps = 54/579 (9%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
              +AIALS + +  +  F+  P        ++           +   A        Q  
Sbjct: 10  RLILAIALSFLFIALYSYFFQKPNKTTTQTTKQETTNNHTATSPNAPNAFSATQTIPQEN 69

Query: 66  SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNTKNAY 120
            +S    +        I+  G +   + L+     ++            L S        
Sbjct: 70  LLSA---ISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSSKENAQPP 124

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT-----ISLD 175
             EL  ++      L        L +    TP +  K        ++  +      I   
Sbjct: 125 LKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGTLTIIKT 184

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             +   +   +           P   I       A        G +    DK + + +  
Sbjct: 185 LTFYDDLHYDLKIAFKSPNNLIPSYVITNGYRPVADLDSYTFSGVLLENNDKKIEKIEDK 244

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D   +       +  +L   D+Y+ ++        F +              +       
Sbjct: 245 D---AKEIKRFSNTLFLSSVDRYFTTLLFTKDSQGFEALIDS----------EIGTKNPL 291

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
                        + G K++ ++         P    +I++G   F AK +F+L+ Y Y 
Sbjct: 292 GFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLLDYLYQ 346

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G AI+L T+ V+++ +PL+ K  VS   +K + PK+ EL+EK+K   PQ LQ  M
Sbjct: 347 FVGNWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQKLQAHM 405

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           +QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+  DP     
Sbjct: 406 MQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSIMDPYF--- 462

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSF 534
                           I P++M  SM+    ++P    D  QA I   +P++F   L +F
Sbjct: 463 ----------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTIFLITF 506

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           PAGL++YW+ +N++S++QQ +I K+   +  +  + +  
Sbjct: 507 PAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545


>gi|220919593|ref|YP_002494897.1| YidC translocase/secretase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254772745|sp|B8JDK5|OXAA_ANAD2 RecName: Full=Inner membrane protein oxaA
 gi|219957447|gb|ACL67831.1| YidC translocase/secretase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 546

 Score =  249 bits (636), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 118/560 (21%), Positives = 214/560 (38%), Gaps = 33/560 (5%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
            N    +A  LSV I+  WQ  +   +           +  K       +  A      A
Sbjct: 4   DNRRILLATVLSVGILILWQVIFPTKKAPPKPAHPPAAEVAKPAAPASPAPGAAAPAVPA 63

Query: 63  QALSM-SPRVELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTKNA 119
                    V L       ++   G     L L    +          + L+    +   
Sbjct: 64  PPPDAPEETVTLAGKGFEATLTTYGGALKSLRLEGDKFRKQEKDREVQIDLVH-VTSGQP 122

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           Y   L             ++         +    + +    +  N    +      + Y 
Sbjct: 123 YPLSLSASPELGGAVDVAADPGARAPMRIVANDASSVTFEGRVGNLAARKTFRVTGKPYE 182

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
             +   ++  +            M    ++     G    F+  +       +++   ++
Sbjct: 183 LALDVELSGGAGSGTVGVLYPAFMPPDTKSGGIFSGPPLDFVRPVCRAGTTTERFDLAKE 242

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
            +        SW G+   Y+ +  +P++     +  +    G               + G
Sbjct: 243 GAPEKLEGQVSWAGVDQHYFVAAVLPAEPIGTCTFVRGPVKGAGLAAVAV------PVEG 296

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359
            +   +  ++AG K+  T+  Y +       +      +F   A+ +  +M +   +V N
Sbjct: 297 GARKLSLTVYAGPKDLDTLRGYGRGF-ESAIDYGAVAKFFALFARGLLYVMRWLEAIVRN 355

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +G+AI+L TV V+L+ FPL  K   S   M+ +QP+I++L+ KF     ++   A++QLY
Sbjct: 356 WGVAIILLTVLVRLVLFPLTYKSMQSMNEMRKLQPEIEKLKAKFGDDREKMNL-AVMQLY 414

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           + H +NPL GC P+LLQ+PV+FA+Y  +  S+E+   P + W+KDL A DP         
Sbjct: 415 QKHKVNPLGGCLPMLLQMPVWFALYAALQTSVELYREP-FLWMKDLTAHDPYF------- 466

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMPVVFVFALSSFPAGL 538
                       I PI M +S F+  K+SP PAD  QA ++  + P  F   +   P GL
Sbjct: 467 ------------ILPIAMGISSFVMQKLSPQPADNAQAKMMLYFFPGFFTVIMLFVPGGL 514

Query: 539 IIYWSWSNVISIVQQAVIMK 558
            +Y   +N++SIVQQ ++MK
Sbjct: 515 TLYIFVNNLLSIVQQQLMMK 534


>gi|307638101|gb|ADN80551.1| Inner membrane protein translocase component [Helicobacter pylori
           908]
 gi|325996702|gb|ADZ52107.1| Inner membrane protein translocase component [Helicobacter pylori
           2018]
 gi|325998294|gb|ADZ50502.1| putative inner membrane protein translocase component [Helicobacter
           pylori 2017]
          Length = 547

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 133/584 (22%), Positives = 227/584 (38%), Gaps = 63/584 (10%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
              +AIALS + +  +  F+  P        ++            N+  A          
Sbjct: 10  RLILAIALSFLFIALYSYFFQKPNKPTTETTKQETTNNHT-TISPNAPNAQHFSVTQTIP 68

Query: 66  SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSPSNTKNAYF 121
             S    +        I+  G +   + L+            +     L S         
Sbjct: 69  QESLLSTISFEHARIEIDSLG-RIKQVYLKDKKYLTPKEKGFLEHVGHLFSSKENSQPSL 127

Query: 122 AELDYVSTANNIEL----------PNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
            EL  ++      L            +       S   L P   + L        + +  
Sbjct: 128 KELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGVLSIIKTL 187

Query: 172 ISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230
              D+ HY  KI    +NN        P   I       A        G +    DK + 
Sbjct: 188 TFYDDLHYDLKIAFKSSNN------LIPSYVITNGYRPVADLDSYTFSGVLLENNDKKIE 241

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
           + +  D   +       +  +L   D+Y+ ++        F +              +  
Sbjct: 242 KIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS----------EIG 288

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
                             + G K++ ++         P    +I++G   F AK +F+L+
Sbjct: 289 TKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLL 343

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
            Y Y  VGN+G AI+  T+ V+++ +PL+ K  VS   +K + PK+ EL+EK+K   PQ 
Sbjct: 344 DYLYQFVGNWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQK 402

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
           LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+  DP
Sbjct: 403 LQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWVLWIHDLSIMDP 462

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVF 529
                                I P++M  SM+    ++P    D  QA I   +P++F  
Sbjct: 463 YF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTI 503

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI-DRLRS 572
            L +FPAGL++YW+ +N++S++QQ +I K+   +  +    ++ 
Sbjct: 504 FLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRVHAQNIKE 547


>gi|108563801|ref|YP_628117.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori HPAG1]
 gi|107837574|gb|ABF85443.1| 60 kDa inner-membrane protein [Helicobacter pylori HPAG1]
          Length = 548

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 128/579 (22%), Positives = 225/579 (38%), Gaps = 52/579 (8%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
              +AIALS + +  +  F+  P        ++            N+  A          
Sbjct: 10  RLILAIALSFLFIAIYSYFFQKPNKTTTQTTKQETTNNHTATS-PNAPNAQHFSVTQTIP 68

Query: 66  SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNTKNAY 120
             +    +        I+  G +   + L+     ++            L SP       
Sbjct: 69  QENLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSPKANPQNL 126

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT-----ISLD 175
             EL  ++      L        L +    TP +  K        ++  +      I   
Sbjct: 127 LKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGTLTIIKT 186

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             +   +   +           P   I       A        G +    DK + + +  
Sbjct: 187 LTFYDDLHYDLQIAFKSPNNIIPSYVITNGYRPVADLDSYTFSGVLLENNDKKIEKIEDK 246

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D   +       +  +L   D+Y+ ++        F +              +       
Sbjct: 247 D---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS----------EIGTKNPL 293

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
                        + G K++ ++         P    +I++G   F AK +F+L+ Y Y 
Sbjct: 294 GFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLLDYLYQ 348

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G AI+  T+ V+L+ +PL+ K  VS   +K + PK+ EL+EK+K   PQ LQ  M
Sbjct: 349 FVGNWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELSPKMKELQEKYKG-EPQKLQAHM 407

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           +QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+  DP     
Sbjct: 408 MQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSIMDPYF--- 464

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSF 534
                           I P++M  SM+    ++P    D  QA I   +P++F   L +F
Sbjct: 465 ----------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTIFLITF 508

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           PAGL++YW+ +N++S++QQ +I K+   +  +  + +  
Sbjct: 509 PAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 547


>gi|254444960|ref|ZP_05058436.1| 60Kd inner membrane protein [Verrucomicrobiae bacterium DG1235]
 gi|198259268|gb|EDY83576.1| 60Kd inner membrane protein [Verrucomicrobiae bacterium DG1235]
          Length = 605

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 121/598 (20%), Positives = 228/598 (38%), Gaps = 48/598 (8%)

Query: 2   ERNWNYFVAIALSVI-IVYAW-------QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53
               N  + ++L V+  +  +       Q  +   +  + +   +            +  
Sbjct: 1   MDKKNTIIGVSLLVVGTILMFKNSQQRQQQAFEERQAAQESAPAQTAPAQTYDGDTPSPS 60

Query: 54  AAVLIDDRAQAL--------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99
           A +       A+              +    V L+N          G    ++ L+ +  
Sbjct: 61  APIPSATTPTAVVANGHAQIEIDEQKTGEQFVSLENDDFEVRFTNYGGAIKEVELKKHRK 120

Query: 100 DVSSNSPIV---TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156
            + S    V      +P+     Y  +   V+          +  +  + G+ L  T   
Sbjct: 121 ALDSEENYVMNRLRYAPALDLTTYLGDAKNVAFDILPSSGRDSVSFRGVIGEQLEVTRTY 180

Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216
            +         F     L    L   +  +    ++    +P G   + +          
Sbjct: 181 TISQDPEGPATFTIVHDLQLRNLTDGLLPLGELLLNIGTVAPSG--SQDRFLQTFGYSNG 238

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF----H 272
            +       D       +       +    +S  W  + ++++ ++  P +  +      
Sbjct: 239 DDVEFTDQSDFMGGGIPFFKKTPKDLVQASDSVVWASVKNQFFITLLTPEEPAAGYIARP 298

Query: 273 SQFKYLSDGHARYQA---KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329
             F   ++                I +  G S+T     +AG KEF  I   +K      
Sbjct: 299 VDFPSDAENAEPKTGLTGDVRLAAINLPAGASVTKRFDFYAGPKEFTRIGKLDKGQ---- 354

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            E  + +G+F  I+K +  +M+    +VGN+G+AI+L T+ V+    P+      S   M
Sbjct: 355 -EQAMQFGFFGIISKFLLQIMNGIQGVVGNWGVAIILLTLIVRGALLPITLLSMKSMKKM 413

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
             +Q  +  L+EKF     Q  Q+ M++LYK + INP+AGC P+LLQIP+FFA++ ++  
Sbjct: 414 SKLQEPMKALKEKFPD-DTQKQQQHMMELYKLNKINPVAGCLPMLLQIPIFFALFYMLRS 472

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           + E+R A  + WI DL+  D       F IL     G   + + P +  +++  QM   P
Sbjct: 473 AAELRFA-DFLWISDLSKPDTIATIPNFPIL-----GDFALNLLPFVWVITLAYQMWTMP 526

Query: 510 PPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
            P+ D  QA ++ +MP +F      F +GL++YW+ SNV +I QQ ++ K  G E  +
Sbjct: 527 TPSVDNAQAKMMKFMPFIFFPFTYMFSSGLVLYWTVSNVFTIGQQWLV-KRGGDEFEV 583


>gi|194335113|ref|YP_002016973.1| 60 kDa inner membrane insertion protein [Prosthecochloris aestuarii
           DSM 271]
 gi|254773012|sp|B4S6X1|OXAA_PROA2 RecName: Full=Inner membrane protein oxaA
 gi|194312931|gb|ACF47326.1| 60 kDa inner membrane insertion protein [Prosthecochloris aestuarii
           DSM 271]
          Length = 584

 Score =  249 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 110/571 (19%), Positives = 224/571 (39%), Gaps = 30/571 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + + L  +I+  W  F    +    + ++  +   ++ + V +  AA    +
Sbjct: 1   MD--RNSVIGLVLISLIMIVWMQFMAPEKKPLQDIDKPAVSLQEEVSPVSDIPAAAATPE 58

Query: 61  R-----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
                 A +      + + N      ++ +GA    + L+ +         ++       
Sbjct: 59  SYGEFSAMSDGEEKLLTVDNEYFTAVLSSRGATLKSMMLKKHLDSSREQFNLIRKNDSGA 118

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
               +  +        ++    + T   +  G     +   +L      NI+   T S D
Sbjct: 119 LSLFFLTQAGKQIDTRDLYFSTAVTESQVTVGADNQFSVTYRLDVAPEKNIVITYTFSGD 178

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSLVEQ 232
            +    I   ++ N           ++            +   +   + A     SL++ 
Sbjct: 179 SYA---IGYDISMNGFASEIAGNEFQLQWDGGLVHSEKNDDDELHNSWAAAYMGGSLLKL 235

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
             SD  K+          W+    KY+ +  IPS ET           G        +  
Sbjct: 236 DASDQSKTYREEQSGVAGWVAARTKYFVAAMIPSSETEGVYLAGKRLAGEPFENYTTALK 295

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMFM 348
                   S   +  L+ G  ++  ++    +      E ++D+GW +    F    +  
Sbjct: 296 FRVPSDESSFKESLRLYVGPIDYNVLNALGVN-----LEKIMDFGWDWLTRPFAEYIILP 350

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           +       +GN+G+ I++    +KL+ +PL      S   M  +QP + E++EK+K +P 
Sbjct: 351 IFDLLNKFIGNYGLIIIIFAFLIKLVTYPLTMASTKSMKKMSALQPMMKEIQEKYKDNPA 410

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           ++    + ++YK   +NPL GC P++LQ+P+ FA++ V   S+++R    + W  DL+  
Sbjct: 411 KLQS-ELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQLRQ-HGFLWANDLSVP 468

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMPVVF 527
           D  +I      +P Y     H+ ++PI+M++++F+Q K++P      Q   +    PV+ 
Sbjct: 469 D--SILDFGFSIPLYG---DHIALFPILMAVAVFLQQKITPTAQTNDQMKAMIYIFPVMM 523

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +   ++ PAGL +Y+   NV SI Q   I K
Sbjct: 524 LLFFNNMPAGLGLYYLMFNVFSIAQTWYINK 554


>gi|331007812|ref|ZP_08330917.1| OxaI/YidC membrane insertion protein [gamma proteobacterium
           IMCC1989]
 gi|330418379|gb|EGG92940.1| OxaI/YidC membrane insertion protein [gamma proteobacterium
           IMCC1989]
          Length = 285

 Score =  249 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 110/310 (35%), Positives = 180/310 (58%), Gaps = 26/310 (8%)

Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313
           +   Y+ S ++P+ ET+     + LS G   Y   FS   +T+  G+  + +   + G K
Sbjct: 1   MIQHYFVSAWVPNSETNNSYSLRKLS-GKDIYLLGFSTPALTVAAGQQGSVSAGFYVGPK 59

Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373
           +   +         P  ++ ID+G+ ++IAKP+F L+   +++VGN+G +I++ T+F+K+
Sbjct: 60  DIDRLEAIA-----PYLDLTIDFGFLWWIAKPIFHLLIMIHDVVGNWGWSIIVLTLFIKI 114

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433
           +FF  +   Y S A M+ + PK+  L+E+F     Q + + M+++YKT  +NP+ GC PI
Sbjct: 115 VFFYPSAVSYRSMARMRKLSPKMALLKERFGDDK-QKMSQEMMKMYKTEKVNPMGGCLPI 173

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+PVF ++Y V+  S+E+RHAPF  WI DL+  DP                     ++
Sbjct: 174 LIQMPVFISLYWVLMESVELRHAPFALWITDLSVKDPYF-------------------VF 214

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
           P+IM ++M+IQ K++P P D  QA I+ WMPV F F    FPAGL+IYW  +N +SI+QQ
Sbjct: 215 PLIMGVTMYIQQKLNPTPPDPMQAKIMQWMPVAFTFMFLWFPAGLVIYWVTNNTLSIIQQ 274

Query: 554 AVIMKMHGAE 563
            +I +   AE
Sbjct: 275 YIITRRIEAE 284


>gi|317181133|dbj|BAJ58919.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori F32]
          Length = 546

 Score =  249 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 132/588 (22%), Positives = 230/588 (39%), Gaps = 58/588 (9%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M++N N      +AIALS + +  +  F+   +           Q     +   NS    
Sbjct: 1   MDKNNNTNIRLILAIALSFLFIALYSYFF---QKPNQTTTPTTKQETTNNHTATNSNTPN 57

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LL 111
                      +    +        I+  G +   + L+     ++            L 
Sbjct: 58  AFSATQTIPQENLLSAISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLF 115

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           +P         EL  ++      L        L +    TP +  K        ++  + 
Sbjct: 116 NPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQD 175

Query: 172 -----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
                I     +   +   +           P   I       A        G +    D
Sbjct: 176 LGALTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYRPVADLDSYTFSGVLLENND 235

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
           K + + +  D   +       +  +L   D+Y+ ++        F +             
Sbjct: 236 KKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS--------- 283

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
            +                    + G K++ ++         P    +I++G   F AK +
Sbjct: 284 -EIGTKNPLGFISLKSEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGV 337

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F+L+ Y Y  VGN+G AI+L T+ V+L+ +PL+ K  VS   +K I PK+ EL+EK+K  
Sbjct: 338 FVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKD- 396

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+
Sbjct: 397 EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLS 456

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
             DP                     I P++M  SM+    ++P    D  QA I  ++P+
Sbjct: 457 IMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFLPL 497

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           +F   L +FPAGL++YW+ +N++S++QQ +I K+   +     + +  
Sbjct: 498 LFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRAHAQNKKE 545


>gi|308185213|ref|YP_003929346.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori SJM180]
 gi|308061133|gb|ADO03029.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori SJM180]
          Length = 548

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 126/579 (21%), Positives = 225/579 (38%), Gaps = 52/579 (8%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
              +AIALS + +  +  F+  P        ++            N+  A          
Sbjct: 10  RLILAIALSFLFITLYSYFFQKPNKTTTETTKQETTNNHTTTS-PNAPNAQHFSVTQTIP 68

Query: 66  SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNTKNAY 120
             +    +        I+  G +   + L+     ++            L S        
Sbjct: 69  QENLLSTISFEHARIEIDFLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSSKENAQPP 126

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT-----ISLD 175
             EL  ++      L        L +    TP +  K        ++  +      I   
Sbjct: 127 LKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGALSIIKT 186

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             +   +   +           P   I       A        G +    DK + + +  
Sbjct: 187 LTFYDDLHYDLKIAFKSPNNLIPSYVITNGYRPVADLDSYTFSGVLLENNDKKIEKIEDK 246

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D   +       +  +L   D+Y+ ++        F +              +       
Sbjct: 247 D---AKEIKRFSNTLFLSSVDRYFTTLLFTKDSQGFEALIDS----------EIGTKNPL 293

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
                        + G K++ ++         P    +I++G   F AK +F+L+ Y Y 
Sbjct: 294 GFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLLDYLYQ 348

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G AI+  T+ V+++ +PL+ K  VS   +K + PK+ EL+EK+K   PQ LQ  M
Sbjct: 349 FVGNWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQKLQAHM 407

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           +QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+  DP     
Sbjct: 408 MQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSIMDPYF--- 464

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSF 534
                           I P++M  SM+    ++P    D  QA I  ++P++F   L +F
Sbjct: 465 ----------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKFLPLLFTIFLITF 508

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           PAGL++YW+ +N++S++QQ +I K+   +  +  + +  
Sbjct: 509 PAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 547


>gi|217033919|ref|ZP_03439343.1| hypothetical protein HP9810_870g51 [Helicobacter pylori 98-10]
 gi|216943682|gb|EEC23127.1| hypothetical protein HP9810_870g51 [Helicobacter pylori 98-10]
          Length = 546

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 133/588 (22%), Positives = 232/588 (39%), Gaps = 58/588 (9%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M++N N      +AIALS + +  +  F+   +           Q     +   NS A  
Sbjct: 1   MDKNNNTNIRLILAIALSFLFIALYSYFF---QKPNQTTTPTTKQETTNNHTATNSNAPN 57

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LL 111
             +        +    +        I+  G +   + L+     ++            L 
Sbjct: 58  AFNTTQTIPQENLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLF 115

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           +P         EL  ++      L        L +    TP +  K        ++  + 
Sbjct: 116 NPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQD 175

Query: 172 -----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
                I     +   +   +           P   I       A        G +    D
Sbjct: 176 LNTLTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYKPVADLDSYTFSGVLLENND 235

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
           K + + +  D   +       +  +L   D+Y+ ++        F +             
Sbjct: 236 KKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS--------- 283

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
            +                    + G K++ ++         P    +I++G   F AK +
Sbjct: 284 -EIGTKNPLGFISFKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGV 337

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F+L+ Y Y  VGN+G AI+L T+ V+L+ +PL+ K  VS   +K I PK+ EL+EK+K  
Sbjct: 338 FVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKG- 396

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+
Sbjct: 397 EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLS 456

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
             DP                     I P++M  SM+    ++P    D  QA I  ++P+
Sbjct: 457 IMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFLPL 497

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           +F   L +FPAGL++YW+ +N++S++QQ +I K+   +     + +  
Sbjct: 498 LFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRAHAQSKKE 545


>gi|212704368|ref|ZP_03312496.1| hypothetical protein DESPIG_02423 [Desulfovibrio piger ATCC 29098]
 gi|212672206|gb|EEB32689.1| hypothetical protein DESPIG_02423 [Desulfovibrio piger ATCC 29098]
          Length = 423

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 122/450 (27%), Positives = 193/450 (42%), Gaps = 46/450 (10%)

Query: 132 NIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVT 187
           N +   S   W L S             ++LV +  N  +        E+YL     ++ 
Sbjct: 8   NGQPSWSTGKWALESDSGVSVAEGGKGVVRLVGEVDNLRVTRELTFNSENYLISEKVSLA 67

Query: 188 NNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE 247
               D      R  +       A   +      +A     SL E+  +D           
Sbjct: 68  TLGTDTRSVRVRYTVAADTSNAANTNYDA--MRVAWDNGGSLGEETSTDKLTKEGVEASG 125

Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307
              W G    Y+ S  +P          +        Y+      E+ + PG+  T    
Sbjct: 126 KLYWAGPMSTYFLSAVMPGDADEARMVGRMQGS---VYRVALEPKEVVVAPGQETTLEVS 182

Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367
            + G KE   +             + +D G F  IAK +  L+ +F     N+G++I++ 
Sbjct: 183 YWMGPKERKMLAAVSDQ-----LALSVDLGMFSIIAKGLLWLLEFFQQYTHNWGLSIIML 237

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427
           T+ +K +F+PL  K Y S   MK +QP +  +REK+K      + K ++ LYKT+ +NP 
Sbjct: 238 TIVIKAVFWPLTAKSYSSMEKMKKLQPMMANIREKYKDDKE-AMNKEVMALYKTYGVNPA 296

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIKDLAAADPTNIFTLFGI 479
           +GC PIL+Q+PVFF +Y+ +  S+E+RHAPF          W+ DL++ DP         
Sbjct: 297 SGCVPILVQLPVFFGLYQALLTSIELRHAPFITYLPGTDLIWLADLSSKDPYY------- 349

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539
                       I PIIM ++MF+Q KMSPP  D  Q  I+ ++P+VF     SFP+GL+
Sbjct: 350 ------------ITPIIMGITMFLQQKMSPPATDPTQQKIMMFLPIVFTALFLSFPSGLV 397

Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           +YW  +N++SI QQ       G    L+ +
Sbjct: 398 VYWLVNNILSIAQQW----RMGRRSKLLAQ 423


>gi|213580793|ref|ZP_03362619.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-0664]
          Length = 317

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 104/329 (31%), Positives = 181/329 (55%), Gaps = 28/329 (8%)

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
           + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+      + 
Sbjct: 1   KYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAIGYK 58

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350
           A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F L+
Sbjct: 59  AQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLL 113

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
            + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+      Q 
Sbjct: 114 KWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QR 172

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
             + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A DP
Sbjct: 173 QSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSAQDP 232

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529
                                I PI+M ++MF   KMSP    D  Q  I+ +MPV+F  
Sbjct: 233 YY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTV 273

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
               FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 274 FFLWFPSGLVLYYIVSNLVTIIQQQLIYR 302


>gi|15612408|ref|NP_224061.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori J99]
 gi|38503266|sp|Q9ZJG8|OXAA_HELPJ RecName: Full=Inner membrane protein oxaA
 gi|4155955|gb|AAD06920.1| putative Inner membrane protein [Helicobacter pylori J99]
          Length = 549

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 127/579 (21%), Positives = 222/579 (38%), Gaps = 51/579 (8%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
              +AIALS + +  +  F+  P        ++             S          Q +
Sbjct: 10  RLILAIALSFLFIALYSYFFQEPNKTTTETTKQETTNNHTATSPTASNTITQDFSVTQTI 69

Query: 66  SMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSPSNTKNAY 120
                +  +        I+  G +   + L+            +     L S        
Sbjct: 70  PQESLLSTISFEHAKIEIDSLG-RIKQVYLKDKKYLTPKEKGFLEHVSHLFSSKENSQPS 128

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT-----ISLD 175
             EL  ++      L        L +    TP +  K        ++  +      I   
Sbjct: 129 LKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGTLSIIKT 188

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
             +   +   +           P   I       A        G +    DK + + +  
Sbjct: 189 LTFYDDLHYDLKIAFKSPNNLIPSYVITNGYRPVADLDSYTFSGVLLENTDKKIEKIEDK 248

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D   +       +  +L   D+Y+ ++        F +              +       
Sbjct: 249 D---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS----------EIGTKNPL 295

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
                        + G K++ ++         P    +I++G   F AK +F+L+ Y Y 
Sbjct: 296 GFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLLDYLYQ 350

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            VGN+G AI+L T+ V+++ +PL+ K  VS   +K + PK+ EL+EK+K   PQ LQ  M
Sbjct: 351 FVGNWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQKLQAHM 409

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           +QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+  DP     
Sbjct: 410 MQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWVLWIHDLSIMDPYF--- 466

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSF 534
                           I P++M  SM+    ++P    D  QA I   +P++F   L +F
Sbjct: 467 ----------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTIFLITF 510

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI-DRLRS 572
           PAGL++YW+  N++S++QQ +I K+   +       ++ 
Sbjct: 511 PAGLVLYWTTHNILSVLQQLIINKVLENKKRAHAQNIKE 549


>gi|208435316|ref|YP_002266982.1| 60 kDa inner-membrane protein [Helicobacter pylori G27]
 gi|208433245|gb|ACI28116.1| 60 kDa inner-membrane protein [Helicobacter pylori G27]
          Length = 548

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 129/577 (22%), Positives = 225/577 (38%), Gaps = 52/577 (9%)

Query: 8   FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67
            +AIALS + +  +  F+  P        ++            N+  A            
Sbjct: 12  ILAIALSFLFIALYSYFFQKPNKTTTQTTKQETTNNHTATS-PNAPNAQNFGTTQTIPQE 70

Query: 68  SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNTKNAYFA 122
           S    +        I+  G +   + L+     ++            L S          
Sbjct: 71  SLLSAISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSSKENAQPPLK 128

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT-----ISLDEH 177
           EL  ++      L        L +    TP +  K        ++  +      I     
Sbjct: 129 ELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGALIIIKTLT 188

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           +   +   +           P   I       A        G +    DK + + +  D 
Sbjct: 189 FYDDLHYDLKIAFKSPNNLIPSYVITNGYRPVADLDSYTFSGVLLENNDKKIEKIEDKD- 247

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
             +       +  +L   D+Y+ ++        F +              +         
Sbjct: 248 --AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS----------EIGTKNPLGF 295

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
                      + G K++ ++         P    +I++G   F AK +F+L+ Y Y  V
Sbjct: 296 ISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLLDYLYQFV 350

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
           GN+G AI+L T+ V+L+ +PL+ K  VS   +K + PK+ EL+EK+K   PQ LQ  M+Q
Sbjct: 351 GNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQKLQAHMMQ 409

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+  DP       
Sbjct: 410 LYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSIMDPYF----- 464

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSFPA 536
                         I P++M  SM+    ++P    D  QA I   +P++F   L +FPA
Sbjct: 465 --------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTIFLITFPA 510

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           GL++YW+ +N++S++QQ +I K+   +  +  + +  
Sbjct: 511 GLVLYWTTNNILSVLQQLIINKILENKKRMHAQNKKE 547


>gi|210135616|ref|YP_002302055.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori P12]
 gi|210133584|gb|ACJ08575.1| inner membrane protein translocase component [Helicobacter pylori
           P12]
          Length = 546

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 128/577 (22%), Positives = 226/577 (39%), Gaps = 54/577 (9%)

Query: 8   FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67
            +AIALS + +  +  F+  P        ++           +   A        Q   +
Sbjct: 12  ILAIALSFLFIAIYSYFFQKPNKSTTQTTKQETTNNHTATSSNAPNAFNATQTIPQENLL 71

Query: 68  SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNTKNAYFA 122
           S    +        I+  G +   + L+     ++            L +P         
Sbjct: 72  S---TISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFNPKANPQTPLK 126

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT-----ISLDEH 177
           EL  ++      L        L +    TP +  K        ++  +      I     
Sbjct: 127 ELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLNTLTIIKTLT 186

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           +   +   +           P   I       A        G +    DK + + +  D 
Sbjct: 187 FYDDLHYDLKIAFKSPNNIIPSYVITNGYRPVADLDSYTFSGVLLENNDKKIEKIEDKD- 245

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
             +       +  +L   D+Y+ ++        F +              +         
Sbjct: 246 --AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS----------EIGTKNPLGF 293

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
                      + G K++ ++         P    +I++G   F AK +F+L+ Y Y  V
Sbjct: 294 ISLKNEADLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLLDYLYQFV 348

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
           GN+G AI+  T+ V+L+ +PL+ K  VS   +K + PK+ EL+EK+K   PQ LQ  M+Q
Sbjct: 349 GNWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQKLQAHMMQ 407

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+  DP       
Sbjct: 408 LYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSIMDPYF----- 462

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSFPA 536
                         I P++M  SM+    ++P    D  QA I   +P++F   L +FPA
Sbjct: 463 --------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTIFLITFPA 508

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           GL++YW+ +N++S++QQ +I K+   +  +  + +  
Sbjct: 509 GLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545


>gi|86150679|ref|ZP_01068900.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88596386|ref|ZP_01099623.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|218562577|ref|YP_002344356.1| putative inner membrane protein translocase component YidC
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|38503224|sp|Q9PNX7|OXAA_CAMJE RecName: Full=Inner membrane protein oxaA
 gi|85838860|gb|EAQ56128.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88191227|gb|EAQ95199.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360283|emb|CAL35078.1| putative membrane protein [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926191|gb|ADC28543.1| putative inner membrane protein translocase component YidC
           [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315928512|gb|EFV07816.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 528

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 142/564 (25%), Positives = 258/564 (45%), Gaps = 55/564 (9%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRI--EEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           +     +A+ +S +    +  F++  +    E N  +KN Q     N  +   A      
Sbjct: 9   QQKRILLAVVISFLFFVIYDYFFIPKQPLKIEQNITQKNQQNTSINNTPNIQNATTNTPS 68

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            A     S   ++++      I+  G +     L+      +     + L+S  N+   Y
Sbjct: 69  AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKD-RKYQNEKGEFINLVSKENS--PY 124

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             E+ +   + N E      V N  +  +    + +  + +N + +  E+ I+      +
Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLTQNLSGLKIEKDITFYPKGNY 184

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
           +I   ++ N+              ++P  A +++ V    + +   +++   K  D+EK 
Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNKETIETYKDGDVEKD 236

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
             +N     S     D+Y+A+             F           +K +     +    
Sbjct: 237 ESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAISKDANQNPIVFAYS 281

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
                   + G+KE   +   +     PR E ++++GWF FIAKPMF  +++ +  +GN+
Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNW 336

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G AI++ T+ V+++ FPL  K  +S   +K++ PK+ ++RE++K   PQ +   M++LYK
Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
            H  NP++GC PILLQIP+FFAIY+V+  ++E++ AP+  WI DL+  DP          
Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539
                      I PI+M  +MF+Q  ++P    D  QA I+ ++PV+F F   +FPAGL 
Sbjct: 448 -----------ILPILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLT 496

Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563
           +YW  +N+ S+VQQ VI K+   E
Sbjct: 497 LYWFVNNLCSLVQQWVINKIFAKE 520


>gi|33519495|ref|NP_878327.1| putative preprotein translocase subunit YidC [Candidatus
           Blochmannia floridanus]
 gi|38502910|sp|Q7U351|OXAA_BLOFL RecName: Full=Inner membrane protein oxaA
 gi|33517158|emb|CAD83540.1| Preprotein translocase subunit YidC [Candidatus Blochmannia
           floridanus]
          Length = 558

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 135/560 (24%), Positives = 245/560 (43%), Gaps = 51/560 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   ++F+ + L V  +  W+ +     I  +N E  N  +  QP  + +  +      
Sbjct: 1   MESQRSFFIIVFLIVSFIL-WKIWDDEHHINLLNIE--NNHSTLQPYSIQSHESNQNTPI 57

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                  S  + +K    +  IN      ++  L  Y  +++S  P+  L +    K   
Sbjct: 58  THTNNPYSHIITIKTDVFLLKINTYSGNIEEAYLNNYQENLNSQKPLKLLHTSKENKYQA 117

Query: 121 FAELD----YVSTANNIELPNSNTVWNLISGK------ILTPTTPIKLVFKNANNILFER 170
           + +++    Y +   N +       ++  + +               L ++  NNI++ +
Sbjct: 118 YIDIETLNEYFTNDLNQKNKKHYLYYSNTTNQCEYILKNNENKLQFDLTYQGPNNIIYTK 177

Query: 171 TISLDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-------TFGVQEGFIA 222
              L+ +     I   + N S   I     G +++                    +    
Sbjct: 178 RYLLNRNDYSIYITYIIDNQSTYPIHIKLYGNLIQSIHSDVIQSKHNDHCPLYTYQEAAY 237

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
               +   +    DI+ ++++  H +N W+ +  KY+    +P           YL++  
Sbjct: 238 STDTEKYQKYNLKDIKHTNLN-IHSTNGWIALLQKYFIIALLPITPKDNTFYTTYLNN-- 294

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
                 F ++ I I PGK     + L+ G K    +         P  +++ID+GW +FI
Sbjct: 295 HDISIGFKSDFIHIPPGKKNELQSILWMGPKIQDNMKLVA-----PNLDLVIDYGWLWFI 349

Query: 343 AKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           + P+F L+ + +   + N+GI+I+L TV ++L+ +PL K QY S A ++ +QPK+  ++E
Sbjct: 350 SHPLFKLLQFIHTYTIDNWGISIILITVIIRLIMYPLTKAQYTSMAKIRMLQPKLISIQE 409

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           ++K    Q   +  I+LYK   +NPL GC P+L+Q+P+F A+Y ++S S+E+RHA F  W
Sbjct: 410 EYKHDKYQ-YHQKTIELYKKEKVNPLGGCLPLLIQMPIFLALYYMLSESVELRHAKFAFW 468

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL 520
           IKDL+  DP                     I PIIM ++MF   K+SP    D  Q  I+
Sbjct: 469 IKDLSDQDPYY-------------------ILPIIMGITMFFIQKLSPTTITDPIQKKIM 509

Query: 521 NWMPVVFVFALSSFPAGLII 540
           N M V+F      FP+GL++
Sbjct: 510 NIMLVIFTIFFLWFPSGLVL 529


>gi|197124875|ref|YP_002136826.1| hypothetical protein AnaeK_4495 [Anaeromyxobacter sp. K]
 gi|254772746|sp|B4UKG1|OXAA_ANASK RecName: Full=Inner membrane protein oxaA
 gi|196174724|gb|ACG75697.1| 60 kDa inner membrane insertion protein [Anaeromyxobacter sp. K]
          Length = 546

 Score =  247 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 119/560 (21%), Positives = 220/560 (39%), Gaps = 33/560 (5%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
            N    +A  LSV I+  WQ  +   ++          +  K       +  A      A
Sbjct: 4   DNRRILLATVLSVGILILWQVIFPTKKVPPKPAPPPAAEVAKPAAPASPAPGAAAPAVPA 63

Query: 63  QALSM-SPRVELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTKNA 119
                    V+L       ++   G     L L    +          + L+  ++ +  
Sbjct: 64  PPPDAPEETVKLAGKGFEATLTTYGGALKSLRLEGDKFRKQEKDREVQIDLVHVTDGQ-P 122

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           Y   L             ++         +    + +    +  N    +      + Y 
Sbjct: 123 YPLSLSASPELGGAADVAADPGARAPMRIVAKDASSVTFEGRVGNLAARKTFRVTGKPYE 182

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
             +   ++  + +          M    ++     G    F+  +       +++   ++
Sbjct: 183 LALDVELSGGAGNGTVGVLYPAFMPPDTKSGGIFSGPPLDFVRPVCRAGTTTERFDLAKE 242

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
            +        SW G+   Y+ +  +P++     +  +    G         A     + G
Sbjct: 243 GAPEKLEGQVSWAGVDQHYFVAAVLPAEPIGTCTFVRGPVKGAGL------AALAVPVEG 296

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359
            +   +  ++AG K+  T+  Y +       +      +F   A+ +  +M +   +V N
Sbjct: 297 GARKLSLTVYAGPKDLDTLRGYGRGF-ESAIDYGAVAKFFALFARGLLYVMRWLEAIVRN 355

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +G+AI+L TV V+L+ FPL  K   S   M+ +QP+I++L+ KF     ++   A++QLY
Sbjct: 356 WGVAIILLTVLVRLVLFPLTYKSMQSMNEMRKLQPEIEKLKAKFGDDREKMNL-AVMQLY 414

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           + H +NPL GC P+LLQ+PV+FA+Y  +  S+E+   P + W+KDL A DP         
Sbjct: 415 QKHKVNPLGGCLPMLLQMPVWFALYAALQTSVELYREP-FLWMKDLTAHDPYF------- 466

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMPVVFVFALSSFPAGL 538
                       I PI M +S F+  K+SP PAD  QA ++  + P  F   +   P GL
Sbjct: 467 ------------ILPIAMGISSFVMQKLSPQPADNAQAKMMLYFFPGFFTVIMLFVPGGL 514

Query: 539 IIYWSWSNVISIVQQAVIMK 558
            +Y   +N++SIVQQ ++MK
Sbjct: 515 TLYIFVNNLLSIVQQQLMMK 534


>gi|222823561|ref|YP_002575135.1| 60 kDa inner-membrane protein [Campylobacter lari RM2100]
 gi|222538783|gb|ACM63884.1| 60 kDa inner-membrane protein [Campylobacter lari RM2100]
          Length = 526

 Score =  247 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 133/568 (23%), Positives = 244/568 (42%), Gaps = 59/568 (10%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
           +     +A+ LS +    +  F++    +   N  +  Q    P    N+       + +
Sbjct: 7   QQKRILIAVVLSFLFFVVYDYFFIPKAPQTEQNITQIEQNNSAPQSTINANTQAPKTELS 66

Query: 63  QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122
                     +K+      I+  G +     L         N   + L+  S +      
Sbjct: 67  -VNQKEEIAVVKSEHFEAHIDSLG-RIAKFYLSDEKYK-DENGKSINLVDTSLSPLP--- 120

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHYLFK 181
            L+   +   I     NT +      I        L+     NN++  + I+  ++  + 
Sbjct: 121 -LEIRFSDTKINQEAFNTPYTTSQKTINVSDENTTLILTQNLNNLVVTKKITFHKYGNYD 179

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
           +     N S D   F   G    ++P  A +++ V    I         +    +     
Sbjct: 180 LE---VNLSKDAAYFITPG----YRPNIAVDSYTVHGVLI----LDKDDKITMLEDGDVE 228

Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301
                 + + +  SD+Y+             + F       +    K +     +    S
Sbjct: 229 NDESFSNVTLMAASDRYY------------SAFFYNFEKPLSAVVTKDNHENSIVFASAS 276

Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361
            T     + G+KE   + + +     PR + ++++GWF FIAKPM+  + + +  +GN+G
Sbjct: 277 NTFKASGYIGSKEHDILRNID-----PRLDNVVEYGWFTFIAKPMYEFLDFLHGYLGNWG 331

Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421
            AI++ T+ V+++ FPL  K  +S   +K++ PK+ E+RE++K   PQ +   M++LYK 
Sbjct: 332 WAIVIMTLIVRIILFPLTYKSMISMNKLKDLAPKMKEIRERYKG-DPQKMNLHMMELYKK 390

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           H  NP++GC PIL+QIP+FFAIY+V+  ++E++ AP+  WI DL+  DP           
Sbjct: 391 HGANPMSGCLPILIQIPIFFAIYRVLLNAIELKAAPWAFWITDLSVMDPWF--------- 441

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLII 540
                     I PI M L+MFIQ  ++P    D  Q  I+ ++P++F F   +FPAGL +
Sbjct: 442 ----------ILPIFMGLTMFIQQLITPMAIQDPMQEKIMKFLPLIFTFFFLTFPAGLTL 491

Query: 541 YWSWSNVISIVQQAVIMK--MHGAEIGL 566
           YW  +N+ S++QQ ++ K   +  +  +
Sbjct: 492 YWCVNNICSLIQQVIVNKLFKNHKKEEI 519


>gi|83816022|ref|YP_444208.1| inner membrane protein oxaA [Salinibacter ruber DSM 13855]
 gi|83757416|gb|ABC45529.1| inner membrane protein oxaA [Salinibacter ruber DSM 13855]
          Length = 665

 Score =  247 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 110/624 (17%), Positives = 220/624 (35%), Gaps = 67/624 (10%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVY---------------------------------- 27
           E   N  +A  L  +I++AW  ++                                    
Sbjct: 23  EDQRNVIIATILVAVIMFAWIFWFSPSPQQQQSQQAAGPADTTEQTDPSAPAADTGADDA 82

Query: 28  PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGA 87
           P      +         QP        A      A       R+ +++      ++ KG 
Sbjct: 83  PSDAAPPSTADAGADASQPEADQPEAPAPDSVTAAALEGTQRRIVVESDLYTVVLSTKGG 142

Query: 88  QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147
             +   L+ Y      +   V ++  +       +         +      +      + 
Sbjct: 143 TIERFTLKEYKQFNQED--PVQIVDTTAGGTLSLSFTTPTRRRVDTRSLYFSADTEADTV 200

Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207
           +I   +  +    +  +  L +      + Y   +                        P
Sbjct: 201 RIEDESKTLTFEAQLGDGALRQSYTFHPDDYDLGLAIEQERPRSFLTSDGYELTWHGGMP 260

Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267
            +                +   ++         +        SW+ + +KY+ +  +P +
Sbjct: 261 YSEGGEEDELRYTGLFARNGEQIQSLTLSDADQNQKRIEGDVSWMAVKNKYFTAAVMPDR 320

Query: 268 E-TSFHSQFKYLSDGHARYQAKF---SANEITILPGKSITT-TNFLFAGAKEFPTIHHYE 322
             T+  +      +G A  +A F   +      LP ++       L+AG  ++ ++  Y 
Sbjct: 321 PATALGASLTGRKEGRATSEAAFKDLTGRLQMPLPRETTHVDKFHLYAGPIDYYSLADYG 380

Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMS-------------YFYNLVGNFGIAIMLTTV 369
           ++L      +   W WF ++ KP+   +              + +     +G+ ++L  V
Sbjct: 381 RNLYGM---VNYGWDWFEWMTKPLAEYLYIPMLTYLGGGLPSWLFGGGLPYGVIVILMAV 437

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429
            +K + +PL K  Y S A M+ +QPK+ E+++K+    P+  Q+ M+QLY+   +NPL G
Sbjct: 438 LIKTVVYPLTKSSYRSMAQMRELQPKMQEIKDKY-DDEPEKQQEEMMQLYRETGVNPLGG 496

Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489
           C P+ LQ P+  ++Y+ I  S+++R    + W  DL+A D   I  L   +PFY      
Sbjct: 497 CLPMFLQYPILISLYQFIPKSIQLRQES-FLWAADLSAPDK--ILQLPFEIPFYGDYVAG 553

Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKG--QAMILNW-MPVVFVFALSSFPAGLIIYWSWSN 546
              + ++M L+M + M++          QA I  + MP V  F  + F +GL +Y+ + N
Sbjct: 554 ---FTLLMGLAMIVTMRVQSTGGGAAGGQAKIFMYAMPGVIFFIFNRFASGLSLYYLFYN 610

Query: 547 VISIVQQAVIMKMHGAEIGLIDRL 570
           +++  QQ  I      E      L
Sbjct: 611 IVTAAQQKWINMQLEKEKDDDGNL 634


>gi|315585837|gb|ADU40218.1| inner membrane protein OxaA [Helicobacter pylori 35A]
          Length = 546

 Score =  247 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 132/588 (22%), Positives = 231/588 (39%), Gaps = 58/588 (9%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M++N N      +AIALS + +  +  F+   +           Q     +   NS    
Sbjct: 1   MDKNNNTNIRLILAIALSFLFIAIYSYFF---QKPNQTTTPTTKQETTNNHTATNSNTPN 57

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LL 111
             +        +    +        I+  G +   + L+     ++            L 
Sbjct: 58  AFNTTQTIPQENLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLF 115

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           +P         EL  ++      L        L +    TP +  K        ++  + 
Sbjct: 116 NPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQD 175

Query: 172 -----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
                I     +   +   +           P   I       A        G +    D
Sbjct: 176 LGALTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYKPVADLDSYTFSGVLLENND 235

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
           K + + +  D   +       +  +L   D+Y+ ++        F +             
Sbjct: 236 KKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS--------- 283

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
            +                    + G K++ ++         P    +I++G   F AK +
Sbjct: 284 -EIGTKNPLGFISLKNGANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGV 337

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F+L+ Y Y  VGN+G AI+L T+ V+L+ +PL+ K  VS   +K I PK+ EL+EK+K  
Sbjct: 338 FVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKG- 396

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+
Sbjct: 397 EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLS 456

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
             DP                     I P++M  SM+    ++P    D  QA I  ++P+
Sbjct: 457 IMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFLPL 497

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           +F   L +FPAGL++YW+ +N++S++QQ +I K+   +     + +  
Sbjct: 498 LFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQNKKE 545


>gi|289826408|ref|ZP_06545520.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-3139]
          Length = 485

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 118/513 (23%), Positives = 214/513 (41%), Gaps = 52/513 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            DP                     I PI+M ++
Sbjct: 461 QDPYY-------------------ILPILMGVT 474


>gi|188528220|ref|YP_001910907.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori Shi470]
 gi|188144460|gb|ACD48877.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori Shi470]
          Length = 546

 Score =  246 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 132/588 (22%), Positives = 234/588 (39%), Gaps = 58/588 (9%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M++N N      +AIALS + +  +  F+  P        ++           +   A  
Sbjct: 1   MDKNNNANIRLILAIALSFLFIAIYSYFFQKPNKTTTPTTKQETTNNHTTTNPNTPNAFN 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LL 111
                 Q   +S    +        I+  G +   + L+     ++            L 
Sbjct: 61  ATQAIPQENLLS---TISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLF 115

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           +P         EL  ++      L        L +    TP +  K        ++  + 
Sbjct: 116 NPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQD 175

Query: 172 -----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
                I     +   +   +        +  P   I       A        G +    D
Sbjct: 176 LGALTIIKTLTFYDDLHYDLQIAFKSPNKIIPSYVITNGYKPVADLDSYTFSGVLLENND 235

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
           K + + +  D   +       +  +L   D+Y+ ++        F +             
Sbjct: 236 KKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS--------- 283

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
            +                    + G K++ ++         P    +I++G   F AK +
Sbjct: 284 -EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGV 337

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F+L+ Y Y  VGN+G AI+L T+ V+L+ +PL+ K  VS   +K I PK+ EL+EK+K  
Sbjct: 338 FVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKD- 396

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI DL+
Sbjct: 397 EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLS 456

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525
             DP                     I P++M  SM+    ++P    D  QA +  ++P+
Sbjct: 457 IMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKLFKFLPL 497

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           +F   L +FPAGL++YW+ +N++S++QQ +I K+   +  +  + +  
Sbjct: 498 LFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545


>gi|226326926|ref|ZP_03802444.1| hypothetical protein PROPEN_00786 [Proteus penneri ATCC 35198]
 gi|225204763|gb|EEG87117.1| hypothetical protein PROPEN_00786 [Proteus penneri ATCC 35198]
          Length = 322

 Score =  246 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 103/334 (30%), Positives = 189/334 (56%), Gaps = 27/334 (8%)

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
             ++ +  + DIE  ++S    +N W+ +  +Y+A+ ++PSK++  +  +    +  +  
Sbjct: 2   KPTIKKYSFGDIEDKNLSLT-TNNGWVAMLQQYFATAWVPSKDSQNNQFYTITLENKSIA 60

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
              + +  +TI P  +   ++ L+ G +    +         P  ++ +D+GW +FI++P
Sbjct: 61  LIGYKSAPVTIAPNSTADISSTLWVGPEIQSEMSAIA-----PHLDLSVDYGWLWFISQP 115

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F L+ + ++ +GN+G +I++ T  V+ + +PL K QY S A M+ +QPK+  LRE+   
Sbjct: 116 LFKLLKFLHSFIGNWGFSIIMITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAALRERIGD 175

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q + + M+ LYK   +NPL GC P+++Q+P+F A+Y ++  S+E+RHAPF  WI+DL
Sbjct: 176 DK-QRMSQEMMALYKQEKVNPLGGCLPLIIQMPIFLALYYMLMGSVELRHAPFMLWIQDL 234

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524
           +A DP                     I P++M ++MFI  K+SP    D  Q  I+ +MP
Sbjct: 235 SAQDPYY-------------------ILPLLMGVTMFIIQKLSPTAVTDPMQQKIMTFMP 275

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           VVF      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 276 VVFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 309


>gi|294505868|ref|YP_003569926.1| Inner membrane protein oxaA [Salinibacter ruber M8]
 gi|294342196|emb|CBH22974.1| Inner membrane protein oxaA [Salinibacter ruber M8]
          Length = 654

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 112/624 (17%), Positives = 223/624 (35%), Gaps = 67/624 (10%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVY---------------------------------- 27
           E   N  +A  L  +I++AW  ++                                    
Sbjct: 12  EDQRNVIIATILVAVIMFAWIFWFSPSPQQQQSQQAAGPADTTEQTDPSAPAADTGADDA 71

Query: 28  PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGA 87
           P      +         QP+       A      A       R+ +++      ++ KG 
Sbjct: 72  PSDAAPPSTADAGADASQPDADQPEAPAPDSVTAAALQGTQRRIVVESDLYTVVLSTKGG 131

Query: 88  QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147
             +   L+ Y      +   V ++  +       +         +      +      + 
Sbjct: 132 TIERFTLKEYKQFNQED--PVQIVDTTAGGTLSLSFTTPSRRRVDTRSLYFSADTKADTV 189

Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207
           +I   +  +    +  +  L +      + Y   +                        P
Sbjct: 190 RIEDESKTLTFEAQLGDGALRQSYTFHPDDYDLGLAIEQERPRSFLTSDGYELTWHGGMP 249

Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267
            +                +   ++         +        SW+ + +KY+ +  +P +
Sbjct: 250 YSEGGEEDELRYTGLFARNGEQIQSLTLSDADQNQKRIEGDVSWMAVKNKYFTAAVMPDR 309

Query: 268 E-TSFHSQFKYLSDGHARYQAKF---SANEITILPGKSITT-TNFLFAGAKEFPTIHHYE 322
             T+  +      +G A  +A F   +      LP ++       L+AG  ++ ++  Y 
Sbjct: 310 PATALGASLTGRKEGRATSEAAFKDLTGRLQMPLPRETTHVDKFHLYAGPIDYYSLADYG 369

Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMS-------------YFYNLVGNFGIAIMLTTV 369
           ++L      +   W WF ++ KP+   +              + +     +G+ ++L  V
Sbjct: 370 RNLYGM---VNYGWDWFEWMTKPLAEYLYIPMLTYLGTGLPSWLFGGGLPYGVIVILMAV 426

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429
            +K + +PL K  Y S A M+ +QPK+ E+++K+    P+  Q+ M+QLY+   +NPL G
Sbjct: 427 LIKTVVYPLTKSSYRSMAQMRELQPKMQEIKDKY-DDEPEKQQEEMMQLYRETGVNPLGG 485

Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489
           C P+ LQ P+  ++Y+ I  S+++R    + W  DL+A D   I  L   +PFY      
Sbjct: 486 CLPMFLQYPILISLYQFIPKSIQLRQES-FLWAADLSAPDK--ILQLPFEIPFYGDYVAG 542

Query: 490 VGIWPIIMSLSMFIQMKMSPP--PADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSN 546
              + ++M L+M + M++      A  GQA I  + MP V  F  + F +GL +Y+ + N
Sbjct: 543 ---FTLLMGLAMIVTMRVQSTGGGAAGGQAKIFMYAMPGVIFFIFNRFASGLSLYYLFYN 599

Query: 547 VISIVQQAVIMKMHGAEIGLIDRL 570
           +++  QQ  I      E      L
Sbjct: 600 IVTAAQQKWINMQLEKEKDDDGNL 623


>gi|187251668|ref|YP_001876150.1| preprotein translocase subunit [Elusimicrobium minutum Pei191]
 gi|186971828|gb|ACC98813.1| Pre-protein translocase subunit [Elusimicrobium minutum Pei191]
          Length = 531

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 119/580 (20%), Positives = 220/580 (37%), Gaps = 73/580 (12%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV--DNSYAAVLID 59
             N  + +A  +  I +  +Q FY  P+ +E   +++     +Q       NS       
Sbjct: 1   MENKKFLMAFLVFFIALLMYQQFYALPKAQEAKAKQEASLVAEQAVTATKSNSSITKTAL 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
             +         +            KGA   D   +    DV+        L+P   +  
Sbjct: 61  TPSDKQVEEKFYDFSTKVADIKFTSKGAGIKDYIFKDCVGDVN--------LTPYTEEGF 112

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           Y                +                            I   +T + ++  +
Sbjct: 113 YTTFPRLTFKEAGRTENSITFT-------------------VEEGYIRINKTYTFNDDGI 153

Query: 180 FKIVDTVTNNSID-----QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
             +  ++ N S       Q  F+    I   + + + N+  ++  +I     K       
Sbjct: 154 NNLSLSIENRSTKEQTLDQFYFNFGPGIGTVESEKSDNSREMKAVYITQEEGKKFPTFHN 213

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSK-------------ETSFHSQFKYLSDG 281
              EK   S    +  W G++++Y+ +V IP               ++            
Sbjct: 214 RSKEKIEDSVKDGNWIWAGLNNRYFLAVLIPQNWKSGLLETEKVIVDSHPRFFGLLGKAK 273

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
                 K +   +++ P       +  + G K++ T             +  I++G+F  
Sbjct: 274 VEGPMLKITVPAMSLPPKSKTVLQSDFYFGPKDYKTFQTMPYS-----LDKSIEFGFFGA 328

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           + K +  ++   Y   GN+G+AI++  V  ++    L   Q+ S+  M+ IQP++  ++E
Sbjct: 329 LGKMVRWVLETLYRFTGNYGVAIIILAVLFQITMLRLTIMQHKSSMVMQKIQPEMKSIQE 388

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           ++K       Q+AM+ LYK H  NP  GC P+L+Q+P+F A++     S E+  A F  W
Sbjct: 389 RYKN-DQTAQQQAMLALYKKHKFNPFMGCLPLLIQLPIFIALFNAFRTSWELHGAGFVWW 447

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAMIL 520
           I DL+A DP                     + PI+M   MFIQ +++ P  +D  Q  +L
Sbjct: 448 ITDLSAKDPFY-------------------VLPIVMGGVMFIQQRITAPVGSDPTQTAML 488

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            WMPV+F F   +FPAGL++YW  +++IS+  Q  + +  
Sbjct: 489 KWMPVIFTFVFINFPAGLVLYWLTNSIISLGIQLYMKRKM 528


>gi|154148946|ref|YP_001406234.1| putative inner membrane protein translocase component YidC
           [Campylobacter hominis ATCC BAA-381]
 gi|153804955|gb|ABS51962.1| inner membrane protein, 60 kDa [Campylobacter hominis ATCC BAA-381]
          Length = 532

 Score =  244 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 135/570 (23%), Positives = 241/570 (42%), Gaps = 64/570 (11%)

Query: 1   MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER-----KNIQTVKQPNQVDNS 52
           ME+       F+A+ L+     A+  FY+       NN       K  +  +       +
Sbjct: 1   MEQLSVQKRIFIAVLLTFAFFIAYDYFYLSKFQVPENNATGALIDKQSRNTEALVNEAPN 60

Query: 53  YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
                +         +   ++K      SI+  G + +   L         +   + L+ 
Sbjct: 61  AKNDKVAPAKAVNKRNVITQIKGKIANFSIDDLG-RINSYVLNESKYKND-DKMQIDLVD 118

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERT 171
            S +       L+   +  ++      T +   +  +        LV      ++L  + 
Sbjct: 119 LSKSPLP----LEMRFSNPDLNELAFKTPYVASASNLDITKNEQNLVLTQNLGDVLVTKN 174

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
           I+   +  +KI   +  N+               +P    + + V    I     K    
Sbjct: 175 ITFYPNGSYKISVQLNKNAE-------FFISPGSRPSIVVDGYTVHGVLIR----KDDES 223

Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
            K  +      +   ++ +    SD+Y+             + F   ++      +  S 
Sbjct: 224 LKMFEDGDVDSNENIQNANIAAASDRYY------------TTFFYDFTNKLNLVISSDSD 271

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
               I      T     F G K +  +   +K     R   +I++GWF FI+KPMF  + 
Sbjct: 272 KVSQIFAKADKTFEAGGFIGPKHYDLLTGIDK-----RLSDVIEYGWFTFISKPMFGFLK 326

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           + +N  GN+G AI++ T+ V+ + +PL+ K  +S   MK++ PK+ EL+ ++K   P+ L
Sbjct: 327 WLHNYTGNWGWAIVIMTLIVRAILYPLSYKGMLSMNKMKDLAPKMKELQARYKG-DPKKL 385

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
           Q +M++LYK +N+NP+ GC PILLQ+P+FFAIY+V+  ++E++ A +  WI DL+  DP 
Sbjct: 386 QTSMMELYKKNNVNPMGGCLPILLQVPIFFAIYRVLLNAIELKGAEWAFWIHDLSVKDPY 445

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530
                               I PI M + MF+Q K++P    D  Q  I+ ++P++F F 
Sbjct: 446 F-------------------ILPITMGILMFLQQKITPTNFTDPMQEKIMKFLPLIFTFF 486

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
             +FPAGL +YW+ +N+ SI+QQ  I KM 
Sbjct: 487 FMAFPAGLTLYWTVNNLASIIQQYTINKMF 516


>gi|157415220|ref|YP_001482476.1| putative inner membrane protein translocase component YidC
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|157386184|gb|ABV52499.1| 60 kDa inner-membrane protein [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747862|gb|ADN91132.1| Inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni M1]
 gi|315932545|gb|EFV11478.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 530

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 136/564 (24%), Positives = 256/564 (45%), Gaps = 55/564 (9%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
           +     +A+ +S +    +  F++  +  ++                  +      +  +
Sbjct: 9   QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPS 68

Query: 63  QALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            AL     V  ++++      I+  G +     L+      +     + L+S  N+   Y
Sbjct: 69  AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKD-KKYQNEKGEFINLVSKENS--PY 124

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             E+ +   + N E      V N  +  +    + +  + +N + +  E+ I+      +
Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLTQNLSGLKIEKDITFYPKGNY 184

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
           +I   ++ N+              ++P  A +++ V    + +   +++   K  D+EK 
Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNKETIETYKDGDVEKD 236

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
             +N     S     D+Y+A+             F           +K +     +    
Sbjct: 237 ESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAISKDANKNPIVFAYS 281

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
                   + G+KE   +   +     PR E ++++GWF FIAKPMF  +++ +  +GN+
Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNW 336

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G AI++ T+ V+++ FPL  K  +S   +K++ PK+ ++RE++K   PQ +   M++LYK
Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
            H  NP++GC PILLQIP+FFAIY+V+  ++E++ AP+  WI DL+  DP          
Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539
                      I PI+M ++MF+Q  ++P    D  QA I+ ++PV+F F   +FPAGL 
Sbjct: 448 -----------ILPILMGVTMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLT 496

Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563
           +YW  +N+ S+VQQ VI K+   E
Sbjct: 497 LYWFVNNLCSLVQQWVINKIFAKE 520


>gi|86150951|ref|ZP_01069167.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|86152990|ref|ZP_01071195.1| inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|121613009|ref|YP_001000640.1| putative inner membrane protein translocase component YidC
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005567|ref|ZP_02271325.1| putative inner membrane protein translocase component YidC
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|85842121|gb|EAQ59367.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85843875|gb|EAQ61085.1| inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|87248917|gb|EAQ71880.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 528

 Score =  243 bits (620), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 136/564 (24%), Positives = 255/564 (45%), Gaps = 55/564 (9%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
           +     +A+ +S +    +  F++  +  ++                  +      +  +
Sbjct: 9   QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPS 68

Query: 63  QALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            AL     V  ++++      I+  G +     L+      +     + L+S  N+   Y
Sbjct: 69  AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKD-KKYQNEKGEFINLVSKENS--PY 124

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             E+ +   + N E      V N  +  +    + +  + +N + +  E+ I+      +
Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLTQNLSGLKIEKDITFYPKGNY 184

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
           +I   ++ N+              ++P  A +++ V    + +   +++   K  D+EK 
Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNKETIETYKDGDVEKD 236

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
             +N     S     D+Y+A+             F           +K +     +    
Sbjct: 237 ESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAISKDANKNPIVFAYS 281

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
                   + G+KE   +   +     PR E ++++GWF FIAKPMF  +++ +  +GN+
Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNW 336

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G AI++ T+ V+++ FPL  K  +S   +K++ PK+ ++RE++K   PQ +   M++LYK
Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
            H  NP++GC PILLQIP+FFAIY+V+  ++E++ AP+  WI DL+  DP          
Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539
                      I PI+M  +MF+Q  ++P    D  QA I+ ++PV+F F   +FPAGL 
Sbjct: 448 -----------ILPILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLT 496

Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563
           +YW  +N+ S+VQQ VI K+   E
Sbjct: 497 LYWFVNNLCSLVQQWVINKIFAKE 520


>gi|57237786|ref|YP_179034.1| putative inner membrane protein translocase component YidC
           [Campylobacter jejuni RM1221]
 gi|57166590|gb|AAW35369.1| inner membrane protein, 60 kDa [Campylobacter jejuni RM1221]
 gi|315058399|gb|ADT72728.1| OxaI/YidC membrane insertion protein [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 530

 Score =  243 bits (619), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 136/564 (24%), Positives = 255/564 (45%), Gaps = 55/564 (9%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
           +     +A+ +S +    +  F++  +  ++                  +      +  +
Sbjct: 9   QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPS 68

Query: 63  QALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            AL     V  ++++      I+  G +     L+      +     + L+S  N+   Y
Sbjct: 69  AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKD-KKYQNEKGEFINLVSKENS--PY 124

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             E+ +   + N E      V N  +  +    + +  + +N + +  E+ I+      +
Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLTQNLSGLKIEKDITFYPKGNY 184

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
           +I   ++ N+              ++P  A +++ V    + +   +++   K  D+EK 
Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNKETIETYKDGDVEKD 236

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
             +N     S     D+Y+A+             F           +K +     +    
Sbjct: 237 ESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAISKDANQNPIVFAYS 281

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
                   + G+KE   +   +     PR E ++++GWF FIAKPMF  +++ +  +GN+
Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNW 336

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G AI++ T+ V+++ FPL  K  +S   +K++ PK+ ++RE++K   PQ +   M++LYK
Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
            H  NP++GC PILLQIP+FFAIY+V+  ++E++ AP+  WI DL+  DP          
Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539
                      I PI+M  +MF+Q  ++P    D  QA I+ ++PV+F F   +FPAGL 
Sbjct: 448 -----------ILPILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLT 496

Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563
           +YW  +N+ S+VQQ VI K+   E
Sbjct: 497 LYWFVNNLCSLVQQWVINKIFAKE 520


>gi|257461375|ref|ZP_05626471.1| inner membrane protein, 60 kDa [Campylobacter gracilis RM3268]
 gi|257441098|gb|EEV16245.1| inner membrane protein, 60 kDa [Campylobacter gracilis RM3268]
          Length = 547

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 127/567 (22%), Positives = 241/567 (42%), Gaps = 52/567 (9%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYP------RIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           ++    +AIA ++I   A+ +FY+                 +       P       +A 
Sbjct: 7   QSKRLAIAIATALIFFVAYDHFYLSKIRAAMEANATAAQIAQKNTAKSAPQTSAAGVSAQ 66

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
             +        +P V +       +I+  G +     L       + N   + L+ P + 
Sbjct: 67  GANLNTANSISAPLVRVVGKEANFTIDGLG-RISSYALNDAKFR-NENGDAINLIDPKSH 124

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLD 175
                  L+       +     +T ++  S ++        +    +   +   + ++  
Sbjct: 125 SKP----LEMRFEDAALNAMAFDTPYSASSNELDVRNGEASVTLSQSLGAVSINKILTFY 180

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ--- 232
            +  +K+   +  N+               +P    +++ V    +   G+  + ++   
Sbjct: 181 PNGSYKLDLKLGGNAR-------YFISPGSRPNVEVDSYTVHGVIVGKPGEAGISDKIAS 233

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
            ++  +  S S     +  +  +++   +    S +  + + F   S       A   + 
Sbjct: 234 FFTGSQAISESVEIFKDGDVDKNERISGANIAASSDRYYTTLFYGESLNATVTDADKISQ 293

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
                 G     +   + GAK+  T+         P    +I++GWF FIA+PMF  +++
Sbjct: 294 VFI---GSDGDLSLTGYIGAKDHATLSSIN-----PALTHIIEYGWFTFIARPMFKFLNW 345

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
            +  +GN+G +I++ T+ ++L+ FPL+ K  +S   +K++ PK+ EL+EK+K    Q LQ
Sbjct: 346 LHGYIGNWGWSIVVLTLIIRLILFPLSYKGMLSMNKLKDLAPKMKELQEKYKDDK-QKLQ 404

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
             M+ LYK +  NP+ GC PILLQIPVFFAIY+V+  ++E++ A +  WI DL+  DP  
Sbjct: 405 MHMMDLYKKNGANPMGGCLPILLQIPVFFAIYRVLLNAIELKGAEWALWIHDLSLKDPYY 464

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531
                              I PI M + MF+Q K++P    D  Q  ++ ++P++F    
Sbjct: 465 -------------------ILPITMGILMFLQQKITPTTFTDPMQEKMMKFLPLIFTVFF 505

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558
             FPAGL +YW+ +N  SI+QQ VI K
Sbjct: 506 VMFPAGLTLYWTVNNFCSIIQQYVINK 532


>gi|315637646|ref|ZP_07892852.1| inner membrane protein [Arcobacter butzleri JV22]
 gi|315478100|gb|EFU68827.1| inner membrane protein [Arcobacter butzleri JV22]
          Length = 533

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 131/572 (22%), Positives = 226/572 (39%), Gaps = 66/572 (11%)

Query: 4   NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
                +   +  +   A++   + P+ E    + K  Q  KQ +  + S + V+ ++   
Sbjct: 11  QKRMIIMTIVVFVFFIAYEFLVLKPQQEAKMAQAKIEQEQKQNSAPEVSTSQVVAENSVN 70

Query: 64  A----------LSMSPRVE-LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
                      +S S  V  +K    +  I+  G +   + L         N   + L  
Sbjct: 71  TPNVDTISSKNVSNSQIVSVIKTAKNVIEIDNLG-RVAQVTLTEEKYK-DENGAQIKLF- 127

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
             N           ++        N     + I          +     N    +  +  
Sbjct: 128 EVNQLKPLEVRFADININEEAFKVNVVPSSSNIDATQNKQELVLTQTLTN---TVLTKKF 184

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
           ++     + +  + TN+        P       +P    + + V       +   +    
Sbjct: 185 TIYPDGHYDLTVSSTND-------KPFFVSNGFRPNVLVDMYAVH----GFITKLNDNSL 233

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
              +   S  +     + ++   D+Y+A+V                           S+N
Sbjct: 234 TTIEDGSSKKNETFVGSKFVSNFDRYYATVI------------YNFEKSLQVTVMPDSSN 281

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
                   S   +   + G K    +         P    +ID+GWF FIAKPMF+L+ +
Sbjct: 282 NPQSFIHSSGNISFSGYMGPKNHRVLESLN-----PELIDVIDYGWFTFIAKPMFVLLQF 336

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
               +GN+G  I+  T+ VKL+ +PL+ K  VS   +K++ PK+ E++ K+K    Q   
Sbjct: 337 LQGYIGNWGWTIVALTILVKLVLYPLSYKGMVSMQKLKDLAPKMKEIQLKYKDDK-QKQS 395

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
             M++LYK H  NP+ GC P+LLQIP+FFAIY+V+  ++E++ A +  WI DLAA DP  
Sbjct: 396 MHMMELYKKHGANPMGGCLPLLLQIPIFFAIYRVLINAIELKGAEWIFWIHDLAAMDPFF 455

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531
                              + PI+M  +M+IQ K++P    D+ Q  I   +P+VF F  
Sbjct: 456 -------------------VLPILMGATMYIQQKITPTTVQDELQKKIFQLLPIVFTFFF 496

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             FPAGL +YW  +N+ +I QQ VI K    +
Sbjct: 497 LWFPAGLTLYWFVNNLFTIGQQYVINKTFERK 528


>gi|109946792|ref|YP_664020.1| putative inner membrane protein translocase component YidC
           [Helicobacter acinonychis str. Sheeba]
 gi|109714013|emb|CAJ99021.1| inner-membrane protein [Helicobacter acinonychis str. Sheeba]
          Length = 546

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 137/591 (23%), Positives = 231/591 (39%), Gaps = 64/591 (10%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M++N N      +AIALS + +  +  F+  P         K            N+    
Sbjct: 1   MDKNNNTNLRLILAIALSFLFITLYSYFFQKPDKTTPKETAKQEAANNNTALNPNAPTTQ 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLS 112
                      S    +        I+  G +   + L+            +     L S
Sbjct: 61  NSSAAQAIPQESLLSTISFEHAKIEIDSLG-RIKQVYLKNKKYLTPKEKGFLEHVSHLFS 119

Query: 113 PSNTKNAYFAELDYVSTA---------NNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
                     EL  +            +      +       S   L P   + L     
Sbjct: 120 SKENTQPLLKELPLLGDNLKPLEVRFLDPTLNNKAFNTSYSASKTTLGPNEQLILTQDLG 179

Query: 164 NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
           +  + +     D+ HY  +I     NN        P   I       A        G + 
Sbjct: 180 DLTIIKTLTFYDDLHYDLQIAFKSPNN------IIPNYVITNGYRPVADLDSYTFSGVLL 233

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
              DK + + +  D   +       +  +L   D+Y+ ++        F +     +   
Sbjct: 234 ENNDKKIEKIEDKD---AKEIKRFSNIRFLSSVDRYFTTLLFTDNPQGFEALIDSETG-- 288

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
                                 T   + G K++ ++         P    +I++G   F 
Sbjct: 289 --------TKNPLGFISLKNEATLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFF 335

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           AK +F+L+ Y Y  VGN+G AI+L T+ V+++ +PL+ K  VS   +K + PK+ EL+EK
Sbjct: 336 AKGVFVLLDYLYQFVGNWGWAIILLTIVVRIILYPLSYKGMVSMQKLKELAPKMKELQEK 395

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +K   PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI
Sbjct: 396 YKG-EPQKLQANMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWI 454

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILN 521
            DL+  DP                     I P+ M  SM+    ++P    D  QA I  
Sbjct: 455 HDLSIMDPYF-------------------ILPLFMGASMYWHQSVTPNTMTDPMQAKIFK 495

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           ++P++F   L +FPAGL++YW  +NV+S++QQ +I K+   +  + ++ + 
Sbjct: 496 FLPLLFTLFLITFPAGLVLYWITNNVLSVLQQLIINKVLENKKHMHEQTKK 546


>gi|283956364|ref|ZP_06373844.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283792084|gb|EFC30873.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 528

 Score =  242 bits (616), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 135/564 (23%), Positives = 255/564 (45%), Gaps = 55/564 (9%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
           +     +A+ +S +    +  F++  +  ++                  +      +  +
Sbjct: 9   QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPS 68

Query: 63  QALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            AL     V  ++++      I+  G +     L+      +     + L+S  N+   Y
Sbjct: 69  AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKD-KKYQNEKGEFINLVSKENS--PY 124

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             E+ +   + N E      + N  +  +    + +  + +N + +  E+ I+      +
Sbjct: 125 PLEMRFSDPSINSEAFKFPYIANSSNLFVDENGSQVLKLTQNLSGLKIEKDITFYPKGNY 184

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
           +I   ++ N+              ++P  A +++ V    + +   +++   K  D+EK 
Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNKETIETYKDGDVEKD 236

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
             +N     S     D+Y+A+             F           +K +     +    
Sbjct: 237 ESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAISKDANKNPIVFAYS 281

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
                   + G+KE   +   +     PR E ++++GWF FIAKPMF  +++ +  +GN+
Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNW 336

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G AI++ T+ V+++ FPL  K  +S   +K++ PK+ ++RE++K   PQ +   M++LYK
Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
            H  NP++GC PILLQIP+FFAIY+V+  ++E++ AP+  WI DL+  DP          
Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539
                      I PI+M  +MF+Q  ++P    D  QA I+ ++PV+F F   +FPAGL 
Sbjct: 448 -----------ILPILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLT 496

Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563
           +YW  +N+ S+VQQ VI K+   E
Sbjct: 497 LYWFANNLCSLVQQWVINKIFAKE 520


>gi|148926121|ref|ZP_01809807.1| putative membrane protein [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145845600|gb|EDK22692.1| putative membrane protein [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 530

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 137/564 (24%), Positives = 255/564 (45%), Gaps = 55/564 (9%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
           +     +A+ +S +    +  F++  +  ++                  +      +  +
Sbjct: 9   QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPS 68

Query: 63  QALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            AL     V  ++++      I+  G +     L+      +     + L+S  N+   Y
Sbjct: 69  AALVSQDSVISKVQSKHFEVQIDSFG-RISAFYLKD-KKYQNEKGEFINLVSKENS--PY 124

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             E+ +   + N E      V N  +  +    + +  + +N + +  E+ I+      +
Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLTQNLSGLKIEKDITFYPKGNY 184

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
           +I   ++ N+              ++P  A +++ V    + +   +++   K  D+EK 
Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNKETIETYKDGDVEKD 236

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
             +N     S     D+Y+A+             F           +K +     +    
Sbjct: 237 ESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAISKDANQNPIVFAYS 281

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
                   + G+KE   +   +     PR E ++++GWF FIAKPMF  +++ Y  +GN+
Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLYQYIGNW 336

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G AI++ T+ V+++ FPL  K  +S   +K++ PK+ ++RE++K   PQ +   M++LYK
Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
            H  NP++GC PILLQIP+FFAIY+V+  ++E++ AP+  WI DL+  DP          
Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539
                      I PI+M  +MF+Q  ++P    D  QA I+ ++PV+F F   +FPAGL 
Sbjct: 448 -----------ILPILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLT 496

Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563
           +YW  +N+ S+VQQ VI K+   E
Sbjct: 497 LYWFVNNLCSLVQQWVINKIFAKE 520


>gi|296273897|ref|YP_003656528.1| membrane protein insertase [Arcobacter nitrofigilis DSM 7299]
 gi|296098071|gb|ADG94021.1| membrane protein insertase, YidC/Oxa1 family [Arcobacter
           nitrofigilis DSM 7299]
          Length = 548

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 129/592 (21%), Positives = 243/592 (41%), Gaps = 73/592 (12%)

Query: 4   NWNYFVAIALSVIIVYAWQNFYVYPRIEEM------------NNERKNIQTVKQPNQVD- 50
                +   +  +   A++   + P+ E              NN  +  Q    P     
Sbjct: 11  QKRMLIMTLIVFVFFVAYEYLVLKPQKEAQAAKIAQEKMVKANNAPQVAQDSTNPASAPV 70

Query: 51  ---NSYAAVLIDDRAQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
              ++ + V     ++ ++ S  V  +     I  I+  G +   + L      ++ ++ 
Sbjct: 71  SNMSTPSNVADAISSKTIAPSDIVSTITTGKNIIQIDKLG-RIAQVTLLQ-RQYINEDNS 128

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NN 165
            + L  P+         L+      NI     N    + +  +        L+       
Sbjct: 129 HIKLFEPNQ-----LRPLEVRFADKNINNEAFNVEVTVSAPVVDATKQTQTLIITQTLKE 183

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
            +  +T+++     + +    TNN               ++P    + +      +    
Sbjct: 184 TVLTKTLTIYADGHYDLDVKATNN-------KQFFITPGYRPNVLADMYADHGAIV---- 232

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
             +      +   KS  +  +++  +L   D+Y+ +V            + +  +     
Sbjct: 233 KLADNTLDVTVDGKSKETQTYKAVKFLAFFDRYYTTV-----------AYNFKKNFQVSI 281

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
               + +    +  ++       + G KE  T+         P+   +I++GWF FIA P
Sbjct: 282 MPDKNNDPQGFIHSENSFIDFSGYMGPKEHKTLKALN-----PQLTGVIEYGWFTFIANP 336

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           MF+ + +  + +GN+G  I+  T+ +KL+ FPL+ K  +S   +K++ PKI EL+EK+K 
Sbjct: 337 MFLFLQFLQSYIGNWGWTIVFATIIIKLILFPLSYKGMMSMQKLKDLAPKIKELQEKYKG 396

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              Q     M++LYK H  NP+ GC P+++QIPVFFA+Y+VI  ++E++ +P+  WI DL
Sbjct: 397 DK-QKQSAHMMELYKKHGANPMGGCLPLIMQIPVFFALYRVILNAIELKGSPWILWIHDL 455

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMP 524
           A  DP                     + PI+M +SMF+Q +++P    D+ Q  I  ++P
Sbjct: 456 ALMDPYY-------------------VLPILMGISMFLQQRITPNTMQDETQKKIFQFLP 496

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
           VVF F    FPAGL +YW  +N+ +I QQ  I KM   +  +    +    K
Sbjct: 497 VVFTFFFLWFPAGLTLYWFINNLFTISQQLFINKMFEKKKLIEIEEKKASKK 548


>gi|157737856|ref|YP_001490540.1| putative inner membrane protein translocase component YidC
           [Arcobacter butzleri RM4018]
 gi|157699710|gb|ABV67870.1| inner membrane protein, 60 kDa [Arcobacter butzleri RM4018]
          Length = 533

 Score =  241 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 129/572 (22%), Positives = 228/572 (39%), Gaps = 66/572 (11%)

Query: 4   NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
                +   +  +   A++   + P+ E    + K  Q  KQ +  + S + V+ ++   
Sbjct: 11  QKRMIIMTIVVFVFFIAYEFLVLKPQQEAKMAQAKIEQEQKQNSAPEVSTSQVVAENSVN 70

Query: 64  A----------LSMSPRVE-LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
                      +S S  V  +K    I  I+  G +   + L         N   + L  
Sbjct: 71  TPNVDAISSKNVSNSQIVSVIKTAKNIIEIDNLG-RVAQVTLTEEKYK-DENGAQIKLF- 127

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
            +N           ++        N     + I          +     N    +  +  
Sbjct: 128 EANQLKPLEVRFADININEEAFKVNVVPSSSNIDATQNKQELVLTQTLTN---TVLTKKF 184

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
           ++     + +  + TN+        P       +P    + + V       +   +    
Sbjct: 185 TIYPDGHYDLTVSSTND-------KPFFVSNGFRPNVLVDMYAVH----GFITKLNDNSL 233

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
              +   S  +     + ++   D+Y+A+V                           S+N
Sbjct: 234 TTIEDGSSKKNETFVGSKFVSNFDRYYATVI------------YNFEKSLQVTVMPDSSN 281

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
                   S   +   + G K    +         P    +ID+GWF FIAKPMF+L+ +
Sbjct: 282 NPQSFIHSSGDISFSGYMGPKNHRVLESLN-----PELIDVIDYGWFTFIAKPMFVLLQF 336

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
             + +GN+G  I+  T+ VK++ +PL+ K  VS   +K++ PK+ E++ K+K    Q   
Sbjct: 337 LQSYIGNWGWTIVALTILVKVVLYPLSYKGMVSMQKLKDLAPKMKEIQLKYKDDK-QKQS 395

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
             M++LYK H  NP+ GC P++LQIP+FFAIY+V+  ++E++ A +  WI DLAA DP  
Sbjct: 396 MHMMELYKKHGANPMGGCLPLILQIPIFFAIYRVLINAIELKGAEWIFWIHDLAAMDPFF 455

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531
                              + PI+M  +M+IQ +++P    D+ Q  I   +P+VF F  
Sbjct: 456 -------------------VLPILMGATMYIQQRITPTTVQDELQKKIFQLLPIVFTFFF 496

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             FPAGL +YW  +N+ +I QQ VI K    +
Sbjct: 497 LWFPAGLTLYWFVNNLFTIGQQYVINKTFERK 528


>gi|298377600|ref|ZP_06987552.1| inner membrane protein OxaA [Bacteroides sp. 3_1_19]
 gi|298265619|gb|EFI07280.1| inner membrane protein OxaA [Bacteroides sp. 3_1_19]
          Length = 633

 Score =  241 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 106/621 (17%), Positives = 246/621 (39%), Gaps = 57/621 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYA 54
           M+   N  +   L  ++++A+  ++  P  E++  +         I+  +Q         
Sbjct: 1   MD--KNTLIGFLLIGVVLFAFS-WFNRPTPEQLEAQRRYQDSIAKIEYAQQLELQKQENK 57

Query: 55  AVLIDDRAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLN 93
           + L++D  + L  S R                       L+N  +   I+ KG +     
Sbjct: 58  SALVEDSLENLPDSVRAQRLQQSFGVFGDAMVGTEDYTTLQNDVVELRISNKGGRICYAR 117

Query: 94  LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153
           L+ Y          + L     +        ++        + N++ ++          +
Sbjct: 118 LKEYDTYNDE---PLVLFDEKES------NFNFTLVTATNRVVNTSDLYFTPVKGNDPNS 168

Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213
             ++L     +++ F  T+  D++ +   +     N +     +    +     +     
Sbjct: 169 VIMRLNTGEGSHLDFTYTLKPDDYMVQYQILGTGLNGVLAPSTNALDLLWEQDIRQQEKG 228

Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273
              ++ ++ +       + ++    KS          W+G  D ++++V I  +     +
Sbjct: 229 RKFEDRYVTLNYKFMADDVEHLSESKSDSKQIPNRLKWIGYKDMFFSTVLISQEGFEATT 288

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---F 330
                       +   +   +        TT    + G  +F  +  ++K ++  +    
Sbjct: 289 LDSKAIPEGDVLKQFKTTASVPFDLQGKETTNLSFYFGPNKFALLKSFDKGVSAEQQLDL 348

Query: 331 EMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           E L+  GW    +     +  L  +    + N+GI I+L T+ VK++ FPL  K Y+S+A
Sbjct: 349 EKLVPLGWGIFRWVNQYFVIPLFDFLGKFIHNYGILILLMTIIVKIILFPLTYKSYMSSA 408

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            M+ ++P+++E+  K+      + ++ A ++LY     +P++GC P+LLQ+P+  A++  
Sbjct: 409 KMRVLRPQVEEINAKYPGQDKAMERQKATMELYSRAGASPMSGCLPMLLQMPILIALFMF 468

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQM 505
              ++E+RH   + W  DL+  D    +  +  +P   P F  H+ ++ ++M+++     
Sbjct: 469 FPSAIELRHQS-FLWAHDLSTYDAIFSWNKY--IPIITPYFGNHISLFCLLMTITNIFYT 525

Query: 506 KMSPPPADKGQAMI------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           K +    + GQ  +      +  MP++F+   + + +GL  Y+  S +I+IVQ  +I + 
Sbjct: 526 KYNMEMTNTGQQQMPGMKAMMYMMPLMFLVFFNQYASGLTYYYFISTLITIVQT-LIFRY 584

Query: 560 HGAEIGLIDRLRSTFSKNYNS 580
              E  L+ +L +   K    
Sbjct: 585 TINEDKLLAKLEANKRKPMKK 605


>gi|57167877|ref|ZP_00367017.1| 60 kDa inner-membrane protein [Campylobacter coli RM2228]
 gi|57020999|gb|EAL57663.1| 60 kDa inner-membrane protein [Campylobacter coli RM2228]
          Length = 531

 Score =  241 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 134/568 (23%), Positives = 253/568 (44%), Gaps = 59/568 (10%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL----- 57
           +     +A+ +S +    +  F++  +  ++       Q   Q     N+          
Sbjct: 9   QQKRILLAVVISFLFFVVYDYFFIPKQQIKLEQNITTTQADSQNATNINAPQQNPQANLN 68

Query: 58  IDDRAQALSMSPRVE-LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
           +   +  +     +  +K+      I+  G +  +  L+      +     + L+S  N 
Sbjct: 69  VAATSNTIPQDKIIADIKSEHFEAQIDSLG-RIVNFYLQD-KKYQNEKGEAINLISKGN- 125

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
              Y  E+ +   A N +  +     ++    I    +    + +  ++++ E+ I+   
Sbjct: 126 -LPYPLEMRFSDPAINTQAFSVPYAADMSEVFIDENGSKTLKLTQQLSDLIVEKKITFYS 184

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
              + I   ++ N               ++P  A +++ V    +    +     +    
Sbjct: 185 KGNYDIEVKLSKNIN-------YFISPGYRPSIAVDSYTVHGALVMDDQETIHTYEDGDM 237

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
            +  +I N   ++++    D+Y+A            + F           +K + N   +
Sbjct: 238 DKDENIKNAWMTSAF----DRYYA------------AFFYNFEKPLNVTISKDAQNNPLV 281

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
                       + G KE   +   +     PR E ++++GWF FIAKPMF  +++ +N 
Sbjct: 282 FAMSDNEFKAGGYMGPKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHNH 336

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           +GN+G AI++  + ++++ FPL  K  +S   +K++ PK+ ELRE++K   PQ +   M+
Sbjct: 337 IGNWGWAIVIMVLIIRIILFPLTYKSMISMNKLKDLAPKMKELRERYKG-DPQKMNMHMM 395

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LYK H  NP++GC PILLQIP+FFAIY+V+  ++E++ AP+  WI DL+  DP      
Sbjct: 396 ELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF---- 451

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535
                          I PI+M ++MFIQ  ++P    D  QA I+ ++P++F F   +FP
Sbjct: 452 ---------------ILPILMGVTMFIQQLITPMTIQDPMQAKIMKFLPIIFTFFFITFP 496

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           AGL +YW  +N+ S+VQQ VI KM   E
Sbjct: 497 AGLTLYWFVNNLCSLVQQWVINKMFAKE 524


>gi|237756916|ref|ZP_04585388.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237690917|gb|EEP60053.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 515

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 118/571 (20%), Positives = 232/571 (40%), Gaps = 70/571 (12%)

Query: 2   ERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQP-NQVDNSYAAV 56
           +      +  A + +++ ++    Q F+      E N  ++  +    P  QV  SY  V
Sbjct: 5   DMQKRLMIFFAAAALLLISFSLVSQYFFKDNAQNEKNQTQQTEKEAAAPIKQVGGSYDLV 64

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
           L  +R  A S+   V +K        +  G +        Y++D+               
Sbjct: 65  LSGERVNADSLKDIVRIKTKEGYVEFSNIGGRIVSAFDNRYNIDIVPE------------ 112

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
               F++ + +     I    + T     S             +    N+  E+T ++++
Sbjct: 113 ----FSKSNKIFPGEIITTDTNITKLLNFSKYESKIKDNKISFYLKNENVEVEKTYTIND 168

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
                +           + +     +               +            E    D
Sbjct: 169 DNTITVDIKTKGLENVGLSYLTGVTLKSEGDFGHDGPIIKTDR-----------EIIRID 217

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
            + ++I    +   W G  +KY+  +                   +  Y    + +   +
Sbjct: 218 NDINTIQTIRDKILWAGQENKYFMQIL------------SVKGGINTVYIVPVAKDTTVV 265

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-----RFEMLIDWGWFYFIAKPMFMLMS 351
           L     +   F + G K +  +                    ID+G+F  + KP+F+L+ 
Sbjct: 266 LSEIPASFEGFNYLGPKLYSLLGEITDKYQKLWNVDLDLRSSIDFGFFGILGKPLFLLLH 325

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           + Y+ V N+G+AI++ TV ++++ FPL  K   +   M ++ P++++L++K+ +  PQ L
Sbjct: 326 FIYDFVHNWGLAIIVLTVLLRIVLFPLNHKSLKAMKKMADLAPEMEKLKKKYAK-DPQKL 384

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
           ++ +++LY     NP++GC PIL QIP+F A+Y V+ +++E+++APF  WIKDL+  DP 
Sbjct: 385 REEIMKLYAEAGANPMSGCLPILAQIPIFIALYNVLMVTVELKNAPFMLWIKDLSDKDPY 444

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531
                               + PI+M LSM +Q  ++P   DK Q MI+  +  VF F  
Sbjct: 445 Y-------------------VLPILMGLSMVVQQFITPIS-DKNQRMIMYILAGVFTFMF 484

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            +FP+GL++YW  +N++ ++Q  ++ K    
Sbjct: 485 MNFPSGLVLYWLTNNILGLIQSVIVNKSMKK 515


>gi|305432097|ref|ZP_07401264.1| inner membrane protein [Campylobacter coli JV20]
 gi|304445181|gb|EFM37827.1| inner membrane protein [Campylobacter coli JV20]
          Length = 531

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 134/568 (23%), Positives = 253/568 (44%), Gaps = 59/568 (10%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL----- 57
           +     +A+ +S +    +  F++  +  ++       Q   Q     N+          
Sbjct: 9   QQKRILLAVVISFLFFVVYDYFFIPKQQIKLEQNITTTQADSQNATNINAPQQNPQANLN 68

Query: 58  IDDRAQALSMSPRVE-LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
           +   +  +     +  +K+      I+  G +  +  L+      +     + L+S  N 
Sbjct: 69  VAATSNTIPQDKIIADIKSEHFEAQIDSLG-RIVNFYLQD-KKYQNEKGEAINLISKGN- 125

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
              Y  E+ +   A N +  +     ++    I    +    + +  ++++ E+ I+   
Sbjct: 126 -LPYPLEMRFSDPAINTQAFSVPYAADMSEVFIDENGSKTLKLTQQLSDLIVEKKITFYS 184

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
              + I   ++ N               ++P  A +++ V    +    +     +    
Sbjct: 185 KGNYDIEVKLSKNIN-------YFISPGYRPSIAVDSYTVHGALVMDDQETIHTYEDGDM 237

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
            +  +I N   ++++    D+Y+A            + F           +K + N   +
Sbjct: 238 DKDENIKNAWMTSAF----DRYYA------------AFFYNFEKPLNVTISKDAQNNPLV 281

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
                       + G KE   +   +     PR E ++++GWF FIAKPMF  +++ +N 
Sbjct: 282 FVMSDNEFKAGGYMGPKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHNH 336

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           +GN+G AI++  + ++++ FPL  K  +S   +K++ PK+ ELRE++K   PQ +   M+
Sbjct: 337 IGNWGWAIVIMVLIIRIILFPLTYKSMISMNKLKDLAPKMKELRERYKG-DPQKMNMHMM 395

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LYK H  NP++GC PILLQIP+FFAIY+V+  ++E++ AP+  WI DL+  DP      
Sbjct: 396 ELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF---- 451

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535
                          I PI+M ++MFIQ  ++P    D  QA I+ ++P++F F   +FP
Sbjct: 452 ---------------ILPILMGVTMFIQQLITPMTIQDPMQAKIMKFLPIIFTFFFITFP 496

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           AGL +YW  +N+ S+VQQ VI KM   E
Sbjct: 497 AGLTLYWFVNNLCSLVQQWVINKMFAKE 524


>gi|301311160|ref|ZP_07217088.1| inner membrane protein OxaA [Bacteroides sp. 20_3]
 gi|300830734|gb|EFK61376.1| inner membrane protein OxaA [Bacteroides sp. 20_3]
          Length = 633

 Score =  240 bits (611), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 106/621 (17%), Positives = 244/621 (39%), Gaps = 57/621 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYA 54
           M+   N  +   L  ++++A+  ++  P  E++  +         I+  +Q         
Sbjct: 1   MD--KNTLIGFLLIGVVLFAFS-WFNRPTPEQLEAQRRYQDSIAKIEYAQQLELQKQENK 57

Query: 55  AVLIDDRAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLN 93
           + L++D  + L  S R                       L+N  +   I+ KG +     
Sbjct: 58  SALVEDSLENLPDSVRAQRLQQSFGVFGEAMVGTEDYTTLQNDVVELRISNKGGRICYAR 117

Query: 94  LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153
           L+ Y          + L     +        ++        + N+  ++          +
Sbjct: 118 LKEYDTYNDE---PLVLFDEKES------NFNFTLVTATNRVVNTGDLYFTPVKGNDPNS 168

Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213
             ++L     +++ F  T+  D++ +   +     N +     +    +     +     
Sbjct: 169 VIMRLNTGEGSHLDFTYTLKPDDYMVQYQILGTGLNGVLAPSTNALDLLWEQDIRQQEKG 228

Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273
              ++ ++ +       + ++    KS          W+G  D ++++V I  +     +
Sbjct: 229 RKFEDRYVTLNYKFMADDVEHLSESKSDSKQIPNRLKWIGYKDMFFSTVLISQEGFEATT 288

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---F 330
                       +   +   +         T   L+ G  +F  +  ++K +   +    
Sbjct: 289 LDSKAIPEGDVLKQFKTTTSVPFDLQGKEATNLSLYFGPNKFALLKSFDKGVVAEQQLDL 348

Query: 331 EMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           E L+  GW    +     +  L  +    + N+GI I+L T+ VK++ FPL  K Y+S+A
Sbjct: 349 EKLVPLGWGIFRWVNQYFVIPLFDFLGKFIHNYGILILLMTIIVKIILFPLTYKSYMSSA 408

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            M+ ++P+++E+  K+      + ++ A ++LY     +P++GC P+LLQ+P+  A++  
Sbjct: 409 KMRVLRPQVEEINAKYPGQDKAMERQKATMELYSRAGASPMSGCLPMLLQMPILIALFMF 468

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQM 505
              ++E+RH   + W  DL+  D    +  +  +P   P F  H+ ++ ++M+++     
Sbjct: 469 FPSAIELRHQS-FLWAHDLSTYDAIFSWNKY--IPIITPYFGNHISLFCLLMTITNIFYT 525

Query: 506 KMSPPPADKGQAMI------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           K +    + GQ  +      +  MP++F+   + + +GL  Y+  S +I+IVQ  +I + 
Sbjct: 526 KYNMEMTNTGQQQMPGMKAMMYMMPLMFLVFFNQYASGLTYYYFISTLITIVQT-LIFRY 584

Query: 560 HGAEIGLIDRLRSTFSKNYNS 580
              E  L+ +L +   K    
Sbjct: 585 TINEDKLLAKLEANKRKPMKK 605


>gi|150007175|ref|YP_001301918.1| putative inner membrane protein translocase component YidC
           [Parabacteroides distasonis ATCC 8503]
 gi|166975877|sp|A6L9D2|OXAA_PARD8 RecName: Full=Inner membrane protein oxaA
 gi|149935599|gb|ABR42296.1| membrane protein, putative [Parabacteroides distasonis ATCC 8503]
          Length = 633

 Score =  240 bits (611), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 105/621 (16%), Positives = 245/621 (39%), Gaps = 57/621 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYA 54
           M+   N  +   L  ++++A+  ++  P  E++  +         I+  +Q         
Sbjct: 1   MD--KNTLIGFLLIGVVLFAFS-WFNRPTPEQLEAQRRYQDSIAKIEYAQQLELQKQENK 57

Query: 55  AVLIDDRAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLN 93
           + L++D  + L  S R                       L+N  +   I+ KG +     
Sbjct: 58  SALVEDSLENLPDSVRAQRLQQSFGVFGDAMVGTEDYTTLQNDVVELRISNKGGRICYAR 117

Query: 94  LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153
           L+ Y          + L     +        ++        + N++ ++          +
Sbjct: 118 LKEYDTYNDE---PLVLFDEKES------NFNFTLVTATNRVVNTSDLYFTPVKGNDPNS 168

Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213
             ++L     +++ F  T+  D++ +   +     N +     +    +     +     
Sbjct: 169 VIMRLNTGEGSHLDFTYTLKPDDYMVQYQILGTGLNGVLAPSTNALDLLWEQDIRQQEKG 228

Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273
              ++ ++ +       + ++    KS          W+G  D ++++V I  +     +
Sbjct: 229 RKFEDRYVTLNYKFMADDVEHLSESKSDSKQIPNRLKWIGYKDMFFSTVLISQEGFEATT 288

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---F 330
                       +   +   +         T    + G  +F  +  ++K ++  +    
Sbjct: 289 LDSKAIPEGDVLKQFKTTASVPFDLQGKEATNLSFYFGPNKFALLKSFDKGVSAEQQLDL 348

Query: 331 EMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           E L+  GW    +     +  L  +    + N+GI I+L T+ VK++ FPL  K Y+S+A
Sbjct: 349 EKLVPLGWGIFRWVNQYFVIPLFDFLGKFIHNYGILILLMTIIVKIILFPLTYKSYMSSA 408

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            M+ ++P+++E+  K+      + ++ A ++LY     +P++GC P+LLQ+P+  A++  
Sbjct: 409 KMRVLRPQVEEINAKYPGQDKAMERQKATMELYSRAGASPMSGCLPMLLQMPILIALFMF 468

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQM 505
              ++E+RH   + W  DL+  D    +  +  +P   P F  H+ ++ ++M+++     
Sbjct: 469 FPSAIELRHQS-FLWAHDLSTYDAIFSWNKY--IPIITPYFGNHISLFCLLMTITNIFYT 525

Query: 506 KMSPPPADKGQAMI------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           K +    + GQ  +      +  MP++F+   + + +GL  Y+  S +I+IVQ  +I + 
Sbjct: 526 KYNMEMTNTGQQQMPGMKAMMYMMPLMFLVFFNQYASGLTYYYFISTLITIVQT-LIFRY 584

Query: 560 HGAEIGLIDRLRSTFSKNYNS 580
              E  L+ +L +   K    
Sbjct: 585 TINEDKLLAKLEANKRKPMKK 605


>gi|255015211|ref|ZP_05287337.1| putative inner membrane protein translocase component YidC
           [Bacteroides sp. 2_1_7]
          Length = 633

 Score =  239 bits (610), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 105/621 (16%), Positives = 245/621 (39%), Gaps = 57/621 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYA 54
           M+   N  +   L  ++++A+  ++  P  E++  +         I+  +Q         
Sbjct: 1   MD--KNTLIGFLLIGVVLFAFS-WFNRPTPEQLEAQRRYQDSIAKIEYAQQLELQKQENK 57

Query: 55  AVLIDDRAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLN 93
           + L++D  + L  S R                       L+N  +   I+ KG +     
Sbjct: 58  SALVEDSLENLPDSVRAQRLQQSFGVFGDAMVGTEDYTTLQNDVVELRISNKGGRICYAR 117

Query: 94  LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153
           L+ Y          + L     +        ++        + N++ ++          +
Sbjct: 118 LKEYDTYNDE---PLVLFDEKES------NFNFTLVTATNRVVNTSDLYFTPVKGNDPNS 168

Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213
             ++L     +++ F  T+  D++ +   +     N +     +    +     +     
Sbjct: 169 VIMRLNTGEGSHLDFTYTLKPDDYMVQYQILGTGLNGVLAPSTNALDLLWEQDIRQQEKG 228

Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273
              ++ ++ +       + ++    KS          W+G  D ++++V I  +     +
Sbjct: 229 RKFEDRYVTLNYKFMADDVEHLSESKSDSKQIPNRLKWIGYKDMFFSTVLISQEGFEATT 288

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---F 330
                       +   +   +         T    + G  +F  +  ++K ++  +    
Sbjct: 289 LDSKAIPEGDVLKQFKTTASVPFDLQGKEATNLSFYFGPNKFALLKSFDKGVSAEQQLDL 348

Query: 331 EMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           E L+  GW    +     +  L  +    + N+GI I+L T+ VK++ FPL  K Y+S+A
Sbjct: 349 EKLVPLGWGIFRWVNQYFVIPLFDFLGKFIHNYGILILLMTIIVKIILFPLTYKSYMSSA 408

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            M+ ++P+++E+  K+      + ++ A ++LY     +P++GC P+LLQ+P+  A++  
Sbjct: 409 KMRVLRPQVEEINAKYPGQDKAMERQKATMELYSRAGASPMSGCLPMLLQMPILIALFMF 468

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQM 505
              ++E+RH   + W  DL+  D    +  +  +P   P F  H+ ++ ++M+++     
Sbjct: 469 FPSAIELRHQS-FLWAHDLSTYDAIFSWNKY--IPIITPYFGNHISLFCLLMTITNIFYT 525

Query: 506 KMSPPPADKGQAMI------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           K +    + GQ  +      +  MP++F+   + + +GL  Y+  S +I+IVQ  +I + 
Sbjct: 526 KYNMEMTNTGQQQMPGMKAMMYMMPLMFLVFFNQYASGLTYYYFISTLITIVQT-LIFRY 584

Query: 560 HGAEIGLIDRLRSTFSKNYNS 580
              E  L+ +L +   K    
Sbjct: 585 TINEDKLLAKLEANKRKPMKK 605


>gi|213622860|ref|ZP_03375643.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
          Length = 470

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 115/490 (23%), Positives = 209/490 (42%), Gaps = 33/490 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
            Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI DL+A
Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460

Query: 468 ADPTNIFTLF 477
            DP  I  + 
Sbjct: 461 QDPYYILPIL 470


>gi|305667728|ref|YP_003864015.1| putative inner membrane protein translocase component YidC
           [Maribacter sp. HTCC2170]
 gi|88707565|gb|EAQ99807.1| putative inner membrane protein translocase component YidC
           [Maribacter sp. HTCC2170]
          Length = 619

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 114/612 (18%), Positives = 225/612 (36%), Gaps = 50/612 (8%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME      N  +   L   I+  +  +   P  EE+  ++   + V+   + D      +
Sbjct: 1   MEEKKFDINSIIGFVLIFGILI-FMFYQNKPTAEEIEAKKAEQEQVEAAAKQDEVQEVKI 59

Query: 58  IDDRAQALSMSPRV--------------------ELKNPSLIGSINLKGAQFDDLNLRGY 97
            +        S  +                     L+N  +   I+ KG Q  +  +R +
Sbjct: 60  AEPETINFQDSTAIANYKSTIGAFGYTAPSEAVTTLENELVTLKISNKGGQIVEATMRNF 119

Query: 98  HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157
              V+ +S  V L+   N      A      + ++  + N+  ++   S         + 
Sbjct: 120 ---VTYDSVPVYLVKDGN------ASFGLNFSTSDNRVLNTKDLFFEPSMSNNDNNQVLS 170

Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +  K A +   E    +  +         +      I       +         +     
Sbjct: 171 MKAKVAPDKYLEYRYEMKPNDYLVDFTIRSQGLNGVINSGNPIHLEWKLKGIRQSKSIQY 230

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
           E     L       +     E S      E   WL     +++S+    +          
Sbjct: 231 ENRYTRLTYNHEDGKISKLSEGSDDEETEEDIKWLSYRQHFFSSILATKENFKKADLSSV 290

Query: 278 LSDGHARYQAKFS----ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
                    A F+    +     L G  ++     + G  +   +  Y++          
Sbjct: 291 NHVEEESRTAGFTKSYDSKIELELNGGELSQNMHWYYGPTDVDVLSDYDELGLADSI--P 348

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
             WG F +I + +F       +    +GIAI++ T+ V+L   P+  K Y+S A MK ++
Sbjct: 349 FGWGIFGWINRYIFTPFYSLLSTYFPYGIAIVIMTILVRLAMSPVTYKSYLSQAKMKVLK 408

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P+I EL EK+K +  +  Q+  ++LY    ++P++GC P  LQ+P+F+A++     S  +
Sbjct: 409 PEISELGEKYKDNAMKK-QQETMKLYNKAGVSPMSGCVPAFLQMPIFYALFMFFPTSFAL 467

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS----- 508
           R    + W  DL++ D    F     +PFY     H+ ++PI+ S+++F  M M+     
Sbjct: 468 RQK-AFLWADDLSSFDTIYQFPEGFSIPFYG---DHISLFPILASVAIFFYMMMTTGQNM 523

Query: 509 -PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
              P       I+  MP + +F  +++ +GL +Y+  SN+I+I    VI +    +  + 
Sbjct: 524 PQQPGMPNMKFIMYLMPFMMLFFFNNYASGLSLYYFVSNLITIGIMLVIKRFILDDDKIH 583

Query: 568 DRLRSTFSKNYN 579
            +++    K   
Sbjct: 584 AQIQENKQKPKK 595


>gi|284097721|ref|ZP_06385731.1| 60 kDa inner membrane insertion protein [Candidatus Poribacteria
           sp. WGA-A3]
 gi|283830767|gb|EFC34867.1| 60 kDa inner membrane insertion protein [Candidatus Poribacteria
           sp. WGA-A3]
          Length = 485

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 116/479 (24%), Positives = 194/479 (40%), Gaps = 44/479 (9%)

Query: 86  GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN---NIELPNSNTVW 142
           GAQ     L+ Y      +   +  + P        A     S  N   N  L   +  +
Sbjct: 1   GAQIQSWKLKQYLTQDEDDPEPIEFVYPEGHFAGPLALQVEDSDVNAMLNDGLFEVSRDF 60

Query: 143 NLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRI 202
           + +     T    +       N ++ +      + YL  +   V                
Sbjct: 61  DTLDDVHPTGHLTLSYRNDENNILVEKEFTFTHDSYLVDVAIRVAGLDDAVGV----LLG 116

Query: 203 MRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASV 262
                           G   ++  +   E                   W  + DKY+ SV
Sbjct: 117 TNFGMVEWGQGLIGALGPAWMIDGELEKE------TPDPEIRRSGDIRWAALQDKYFISV 170

Query: 263 FIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322
            IP       ++ +             ++     +  +       L+AG K+F  +    
Sbjct: 171 MIPQGAQGVFAKAETDYV--------VTSGVEFPVEAEGSRLRFQLYAGPKQFDLMRSLG 222

Query: 323 KD-LAIPRFEMLID--WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379
                   F   I   W     +AKP+F ++ + Y    N+G+AI+L T  +KLLF PL 
Sbjct: 223 HSLEDTIDFGWFIYGSWSVVKAVAKPLFYVLRFLYEYTQNYGVAIILLTCGIKLLFVPLQ 282

Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
            K Y S   M+ IQPKI  ++ KFK+   + L + +++LYK H +NP+ GC P++LQ+PV
Sbjct: 283 YKSYKSMQGMQKIQPKIQAVQAKFKE-DRERLNRELMKLYKEHKVNPVGGCLPMVLQMPV 341

Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           F +++ ++ +++++R+APF  WI DL+  DP                     ++PI+M  
Sbjct: 342 FISLFNILYMTVDLRNAPFALWITDLSIPDPFY-------------------VFPILMGA 382

Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           SM +Q K+ P   D  QA ++  +PV   F   +FPAGL+IYW  +NV++I QQ V  +
Sbjct: 383 SMVLQQKIMPTTMDPTQAKMMLLLPVFLTFLFLNFPAGLVIYWLTNNVLTIGQQVVTDR 441


>gi|153951835|ref|YP_001397950.1| putative inner membrane protein translocase component YidC
           [Campylobacter jejuni subsp. doylei 269.97]
 gi|152939281|gb|ABS44022.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 530

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 132/564 (23%), Positives = 253/564 (44%), Gaps = 55/564 (9%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
           +     +A+ +S +    +  F++  +  ++                  +      +  +
Sbjct: 9   QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNIPNIQNTTTNTPS 68

Query: 63  QAL--SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            AL    S   ++++      I+  G +     L+      +     + L+S  N+   Y
Sbjct: 69  AALVSQDSMISKVQSKHFEAQIDSFG-RISAFYLKD-KKYQNEKGEFINLVSKENS--PY 124

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             E+ +   + N E        N  +  +    + +  + +N + +  E+ I+      +
Sbjct: 125 PLEMRFSDPSINSEAFKIPYAANANNLFVDENGSQVLKLTQNLSGLKIEKDITFYAKGNY 184

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
           +I   ++ N+              ++P  A +++ V    +    +     +     +  
Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALVVDNKETIETYKDGDVEKDE 237

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
           S +N   ++++    D+Y+A            + F           +K +     +    
Sbjct: 238 SANNVVMTSAF----DRYYA------------NFFYNFDKPLNVAISKDANKNPIVFAYS 281

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
                   + G+KE   +   +     PR E ++++GWF FIAKPMF  +++F+  +GN+
Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFFHQYIGNW 336

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G AI++ T+ V+++ FPL  K  +S   +K++ PK+ ++RE++K   PQ +   M++LYK
Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
            H  NP++GC PILLQIP+FFAIY+V+  ++E++ AP+  WI DL+  DP          
Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539
                      I PI+M  +MF+Q  ++P    D  QA I+ ++PV+F F   +FPAGL 
Sbjct: 448 -----------ILPILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLT 496

Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563
           +YW  +N+ S+VQQ VI K+   E
Sbjct: 497 LYWFVNNLCSLVQQWVINKIFAKE 520


>gi|256840550|ref|ZP_05546058.1| inner membrane protein oxaA [Parabacteroides sp. D13]
 gi|262381171|ref|ZP_06074309.1| inner membrane protein oxaA [Bacteroides sp. 2_1_33B]
 gi|256737822|gb|EEU51148.1| inner membrane protein oxaA [Parabacteroides sp. D13]
 gi|262296348|gb|EEY84278.1| inner membrane protein oxaA [Bacteroides sp. 2_1_33B]
          Length = 633

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 104/621 (16%), Positives = 243/621 (39%), Gaps = 57/621 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYA 54
           M+   N  +   L  ++++A+  ++  P  E++  +         I+  +Q         
Sbjct: 1   MD--KNTLIGFLLIGVVLFAFS-WFNRPTPEQLEAQRRYQDSIAKIEYAQQLELQKQENK 57

Query: 55  AVLIDDRAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLN 93
           + L++D  + +  S R                       L+N  +   I+ KG +     
Sbjct: 58  SALVEDSLENVPDSVRAQRLQQSFGVFGEAMVGTEDYTTLQNNLVELRISNKGGRICYAR 117

Query: 94  LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153
           L+ Y          + L     +        ++        + N+  ++          +
Sbjct: 118 LKEYDTYNDE---PLVLFDEKES------NFNFTLVTATNRVVNTGDLYFTPVKGNDPNS 168

Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213
             ++L     +++ F  T+  D++ +   +     N +     +    +     +     
Sbjct: 169 VIMRLNTGEGSHLDFTYTLKPDDYMVQYQILGTGLNGVLAPSTNALDLLWEQDIRQQEKG 228

Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273
              ++ ++ +       + ++    KS          W+G  D ++++V I  +     +
Sbjct: 229 RKFEDRYVTLNYKFMADDVEHLSESKSDSKQIPNRLKWIGYKDMFFSTVLISQEGFEATT 288

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---F 330
                       +   +   +         T    + G  +F  +  ++K +   +    
Sbjct: 289 LDSKAIPEGDVLKQFKTTTSVPFDLQGKEATNLSFYFGPNKFALLKSFDKGVVAEQQLDL 348

Query: 331 EMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           E L+  GW    +     +  L  +    + N+GI I+L T+ VK++ FPL  K Y+S+A
Sbjct: 349 EKLVPLGWGIFRWVNQYFVIPLFDFLGKFIHNYGILILLMTIIVKIILFPLTYKSYMSSA 408

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            M+ ++P+++E+  K+      + ++ A ++LY     +P++GC P+LLQ+P+  A++  
Sbjct: 409 KMRVLRPQVEEINAKYPGQDKAMERQKATMELYSRAGASPMSGCLPMLLQMPILIALFMF 468

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQM 505
              ++E+RH   + W  DL+  D    +  +  +P   P F  H+ ++ ++M+++     
Sbjct: 469 FPSAIELRHQS-FLWAHDLSTYDAIFSWNKY--IPIITPYFGNHISLFCLLMTITNIFYT 525

Query: 506 KMSPPPADKGQAMI------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           K +    + GQ  +      +  MP++F+   + + +GL  Y+  S +I+IVQ  +I + 
Sbjct: 526 KYNMEMTNTGQQQMPGMKAMMYMMPLMFLVFFNQYASGLTYYYFISTLITIVQT-LIFRY 584

Query: 560 HGAEIGLIDRLRSTFSKNYNS 580
              E  L+ +L +   K    
Sbjct: 585 TINEDKLLAKLEANKRKPMKK 605


>gi|90408841|ref|ZP_01216983.1| tRNA modification GTPase [Psychromonas sp. CNPT3]
 gi|90310068|gb|EAS38211.1| tRNA modification GTPase [Psychromonas sp. CNPT3]
          Length = 331

 Score =  237 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 113/350 (32%), Positives = 181/350 (51%), Gaps = 29/350 (8%)

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
                  G      +    + K+ D++ +++        W+ +   Y+ + +IPS +   
Sbjct: 1   MMMSAYRGGAFSTTETRYGKYKFDDMQDAALKET-TKGGWVAMLQHYFVAAWIPSVDD-- 57

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            +               F A   T+      T +  L+ G K    +            +
Sbjct: 58  TNVLYSNVIRGTDAAIGFKAPVQTVEAHSEKTISADLWVGPKLQDEMAEVAS-----HLD 112

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           + +D+GW +FIA+P+F L+ +F  +VGN+G+AI+L T  VK   +PL K QY S A M+ 
Sbjct: 113 LTVDYGWLWFIAQPLFKLLLFFQGIVGNWGVAIILITFTVKGALYPLTKAQYTSMAKMRL 172

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +QPKI ELRE++K    Q + K+M++LYK   +NPL GC+PILLQ+P+F A+Y  +  ++
Sbjct: 173 LQPKIKELRERYKD-DRQKISKSMMELYKKEKVNPLGGCFPILLQMPIFIALYWSLMEAV 231

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           ++RHAPF  WI+DL+  DP                     I PI+M +SMF   KMSP  
Sbjct: 232 QLRHAPFVLWIQDLSVQDPYY-------------------IMPILMGVSMFFIQKMSPTQ 272

Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
             D  Q  I+ +MP++F F    FPAGL++YW  SN+++++QQ +I +  
Sbjct: 273 VEDPMQQKIMKFMPIIFTFFFLWFPAGLVLYWLMSNIVTLIQQTIIFRQF 322


>gi|124516563|gb|EAY58071.1| putative inner-membrane protein [Leptospirillum rubarum]
          Length = 511

 Score =  237 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 122/554 (22%), Positives = 229/554 (41%), Gaps = 67/554 (12%)

Query: 8   FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67
              I +S  ++     ++  P        +   ++   P Q  ++ +  +++D       
Sbjct: 8   IALIVISFNLII---YYFWGP--------QNRQKSSTTPKQAISALSLPMVNDIYD---- 52

Query: 68  SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA---YFAEL 124
              + ++N  +  S++L+  Q     L  YH    S+   ++LL           +  + 
Sbjct: 53  -QSLSIQNKDVRWSVSLRTGQIYKWTLLHYHHS--SDHKYLSLLDTQKGYAGMGLFSRDS 109

Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184
             +       +   N   +     + +    +   ++   N++  R   L   YL     
Sbjct: 110 GTLVPVLPESIVWENNQIHPGLVVVSSTGGNLVETYRIKGNVVTLRMHFLPSGYLVSAHL 169

Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244
              ++            +   K    T   G                 K+ +++K     
Sbjct: 170 ENPSHVNVVFGSGLNFGVSALKQTYGTEFQGPVYEGAG----------KFQEVKKDGSLF 219

Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304
           F     W+G  DKY+      S                   + K + +          + 
Sbjct: 220 FDSGLKWVGNEDKYFIGYIASSTPG-------------FSVEIKKNGSSSWFQLLSKNSI 266

Query: 305 TNFLFAGAKEFPTIHHYEKD-LAIPRFEMLID--WGWFYFIAKPMFMLMSYFYNLVGNFG 361
              ++   K +  +   +   +    F   +        F+AKP+F+LMSY   +V N+G
Sbjct: 267 DFKIYGEPKRYKLLKEQDSGLIDTIDFGWFMFGRILLISFLAKPIFLLMSYLVGIVHNYG 326

Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421
           +AI+L T+ +K++F PLA   Y S   M+++QP+I +L+ KFK      L +A+++LYK 
Sbjct: 327 VAIILVTILIKIIFSPLAYMSYKSIYEMQSLQPEIKKLQTKFKDDKA-ALNQALMELYKE 385

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
             +NPL GC P+L+QIPVF A+Y +++ ++E+R APF  WI DL+  DP           
Sbjct: 386 RRVNPLGGCLPMLVQIPVFVALYNILNNTVELRQAPFILWIHDLSLKDPYY--------- 436

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541
                     + PI+M ++M +Q K++P   D  Q  ++ ++PV+  F   +FPAGL++Y
Sbjct: 437 ----------VLPIVMGITMILQYKLNPSSPDPVQQKVMMFVPVIMTFFFLNFPAGLVLY 486

Query: 542 WSWSNVISIVQQAV 555
           W  +NV++I QQ +
Sbjct: 487 WLVNNVLTIGQQYL 500


>gi|260062422|ref|YP_003195502.1| putative inner membrane protein translocase component YidC
           [Robiginitalea biformata HTCC2501]
 gi|88783985|gb|EAR15156.1| putative inner membrane protein translocase component YidC
           [Robiginitalea biformata HTCC2501]
          Length = 616

 Score =  237 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 117/620 (18%), Positives = 236/620 (38%), Gaps = 63/620 (10%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP----------- 46
           ME      N  +   L   I+  W  +   P  EE+  +++  + V+             
Sbjct: 1   MEEKKLDINSIIGFVLIFGILIYW-FYTNQPTPEEVEAQKQATEQVQDSIRRAEAAAAPQ 59

Query: 47  ---------NQVDNSYAAVLIDDRAQALSMSPRVE----LKNPSLIGSINLKGAQFDDLN 93
                     + ++S A      R  A S +P VE    L+N  L   I+ KG +  +  
Sbjct: 60  QAATPAATVPEGNDSLARAAYASRIGAFSYTPAVEGTTLLENDVLSLEISNKGGEIVEAR 119

Query: 94  LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153
           ++ +   V+ +S  V L+   N      A+     T ++  + N+  ++   +       
Sbjct: 120 MKQF---VNHDSLPVYLVREGN------AQFSLEITTSDNRVLNTRDLFFEPTLSREGEN 170

Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVD--TVTNNSIDQIRFSPRGRIMRHKPQTAT 211
           + + +          E   ++         D  +   +         R  +   +   + 
Sbjct: 171 SVLSMKAMAGPRQFLEYRYTIRPGEYLLDFDIRSQGLSLSASKGVPLRWSLRAIRHDPSV 230

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
                            + +                   W+     +++S+    +    
Sbjct: 231 MYENRYTRLTYRHEGDDISKLS----ASGEDDETESEVRWMSFRQHFFSSILAVDEPLDT 286

Query: 272 HSQFKYL----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327
            +               +  +FS      + G  ++ +   + G  +   +  YE     
Sbjct: 287 VTLTSNDLVEEESSETAFTKEFSIASELPVTGGELSRSMQWYFGPTDIDVLEQYEDLALA 346

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
                   WG F +I + +F     F      FGIAI++ T+ V++L  P+  K Y+S A
Sbjct: 347 DSI--PFGWGIFGWINRYIFTPFYGFLASFLPFGIAIVVMTIIVRILMSPVTYKSYLSQA 404

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
            M+ ++P+I E+ EK+K +  +  Q+A ++LY    ++PL+GC P LLQ+P+F+A++   
Sbjct: 405 KMRVLKPEITEINEKYKDNAMKK-QQATMKLYNKAGVSPLSGCIPALLQLPIFYALFMFF 463

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504
             S  +R    + W +DL++ D   I  L   +PFY     HV ++PI+ S+++F     
Sbjct: 464 PTSFALRQKS-FLWAEDLSSYD--TIAQLPFSIPFYG---DHVSLFPILASVAIFFYMMM 517

Query: 505 ---MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
               +M   P       I+   P++ +F  +++ +GL +Y+  SN+I+I    VI  +  
Sbjct: 518 TTGQQMQTQPGMPNMKFIMYLSPLMMLFFFNNYASGLSLYYFVSNLITIGIMLVIKNVIL 577

Query: 562 AEIGLIDRLRSTFSKNYNSQ 581
            E  +  +++    K    +
Sbjct: 578 DEEKIHAQIQEQ-KKKPRKE 596


>gi|225164119|ref|ZP_03726399.1| 60 kDa inner membrane insertion protein [Opitutaceae bacterium
           TAV2]
 gi|224801254|gb|EEG19570.1| 60 kDa inner membrane insertion protein [Opitutaceae bacterium
           TAV2]
          Length = 616

 Score =  237 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 110/586 (18%), Positives = 208/586 (35%), Gaps = 38/586 (6%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS--------Y 53
               N  + +   V    A          +          TV  P    +          
Sbjct: 1   MDKKNLILGVTFLVAAFAALLYSSRQQSQQRPPAPPSPAPTVSAPATAGDPLASAATAAP 60

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
           A       A   + +    L N  +       G    D+ L+ Y   + +  P V     
Sbjct: 61  ANTTFAPIASNKTEATITTLSNDYVEVRFTNFGGAIRDVALKKYPAAIGAAKPFVFNEEH 120

Query: 114 SNTKNAYFAELDY-------VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
           ++    +             + +A   E+         +         P      + +  
Sbjct: 121 ADPILGFTDIAGLDKEARFELVSATADEVVFRAVFEKRLEVTRRYVLAPATGDKSSRDPY 180

Query: 167 LFERTISLDEHYLFKIVDTVTNNS-IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
                 ++          T  N S                   +             + G
Sbjct: 181 RILHETTVKNLADHTTPVTSLNLSLGTAALMGANDTGFYLNVASYNGDKAQFTDRNELKG 240

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE-----TSFHSQFKYLSD 280
                     D    +         W  + ++++AS++ P  +     T     F     
Sbjct: 241 GGFFASMGMGDPNPKAYIIQPGPVQWASVKNQFFASIYTPDDKLIEGVTVRRVSFAAPLP 300

Query: 281 GHARYQAKFSANE----ITILPGKSITTTNFLFAGAKEFPTIHHYEK-DLAIPRFEMLID 335
           G        +A+       I P  + T T  L+ G KE+  + ++ + +  + +F+    
Sbjct: 301 GTTTENIGLTASAKVELPAIAPQGTATFTGKLYVGPKEYTRLKNFTRGEDKVMQFDRYFF 360

Query: 336 WGWF--YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
              F    IA  M M+M+  +  VGN+G+AI+L T+ +K +  P       S   M+ +Q
Sbjct: 361 NRIFLSGVIAPFMNMMMNGIHAFVGNWGLAIVLMTLILKTVTLPFTLAASRSAKRMQKLQ 420

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P + E+ EK+K +P +   +A++ L+K H +NP+ GC P+L+ IP+F A + ++  + E+
Sbjct: 421 PMMKEINEKYKDNPTKK-NQAVMALFKEHKVNPMGGCLPVLITIPLFVAFFAMLQGTAEL 479

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512
           R    + W +DL+A D      L  +        + + I P++M  +M  QM+++P P+ 
Sbjct: 480 RFQS-FLWARDLSAPDTIARIPLGFM-------TLPINILPLLMGATMVFQMRLTPSPSV 531

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           D  QA I   MP +F     +F   L +Y + + + +IVQQ  + +
Sbjct: 532 DNAQAKIFKMMPWIFTIICYNFSCALALYSTINGLYTIVQQLAVNR 577


>gi|511459|gb|AAA56919.1| 60 kDa inner membrane protein [Coxiella burnetii]
          Length = 487

 Score =  237 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 109/490 (22%), Positives = 206/490 (42%), Gaps = 26/490 (5%)

Query: 1   MERNWNYFVAIA---LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      + +    L++ +  AWQ  Y          E+              ++    
Sbjct: 1   MDI-KRIILYVIVALLAIALFNAWQRDYPPTPKPTPTVEQPTANGDHPTAYTPPAFTPGA 59

Query: 58  IDDRAQA--------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
            +   +A        +  +  + ++   L   I+ +G       L  Y + +      V 
Sbjct: 60  AEKTKKAGTIAFTSKVPEARLITVRTDVLDVEIDTQGGNIVSAKLPKYPVSLEEKQTPVQ 119

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           +LS       Y A+    +           +       +       ++L  +  + +L  
Sbjct: 120 ILSGE-PNELYIAQSGLTNGNGQPTTVQFESEKKQYVLENGQNQLIVQLTGRAPDGLLVT 178

Query: 170 RTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
           +T +   + Y   +   V NN+    + S   +I R +P T  + F V+    A +G   
Sbjct: 179 KTYTFHRDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHFYVRSYNGASMGSPQ 238

Query: 229 --LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHA 283
               +  Y  ++K +I    +S  W+ +   Y+ S ++P      +  + ++   SD   
Sbjct: 239 TPYEKLSYESLDKQNIDRTSQS-GWIAMQQHYFLSAWVPGNPELTYHYYSHVIPASDEPN 297

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            Y   F + ++ +  G    T   L+ G +    +         P  E  ID+GW + I+
Sbjct: 298 VYVVGFVSPQMNVAAGSEAATHATLYVGPEIAKRLKGLA-----PGLERTIDYGWLWPIS 352

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +F ++S  + +V N+G +I++TT+ +K++F+  + K + S A M+ +QP+I  L+E+ 
Sbjct: 353 MLLFWILSAVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARMREMQPRIQALKERH 412

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                Q L +A ++LY+   INPL GC P+L+Q+PVF A Y VI  S+++R APF  WI 
Sbjct: 413 GD-DRQALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIESVQLRQAPFIFWIH 471

Query: 464 DLAAADPTNI 473
           DL+  DP  I
Sbjct: 472 DLSVKDPYYI 481


>gi|206603435|gb|EDZ39915.1| Putative inner-membrane protein [Leptospirillum sp. Group II '5-way
           CG']
          Length = 511

 Score =  237 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 122/558 (21%), Positives = 225/558 (40%), Gaps = 67/558 (12%)

Query: 5   WNYF-VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
                +A+ +    +  +  +    R +     ++ I  +  P   D             
Sbjct: 3   KRLLPIALIVISFNLIIYYFWGPQNRQKPSTTPKQAISALSVPMVND------------- 49

Query: 64  ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA---Y 120
             +    + ++N  +  S++++  Q     L  YH    SN   ++LL           +
Sbjct: 50  --TYDQSLSIQNKDVRWSVSMRTGQIYQWTLLHYHHS--SNHKYLSLLDTEKGYAGMGLF 105

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             +   +       +   N         + +    +   +K   N++  R   L   YL 
Sbjct: 106 SRDSGTLVPVLPESIVWDNAQIRPGLVVVSSAGGNLVETYKMNGNVVILRFHFLPSGYLI 165

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
                  +++           +   K    T   G                 K+ +++K 
Sbjct: 166 SSHLENPSHANVVFGSGLNFGVSALKQTYGTEFQGPVYEATG----------KFQEMKKD 215

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
               F     W+G  DKY+      S                   + K + +        
Sbjct: 216 GSLFFDSGLKWVGNEDKYFIGYIASSTPGP-------------SVEIKKNGSSSWFQLLS 262

Query: 301 SITTTNFLFAGAKEFPTIHHYEKD-LAIPRFEMLID--WGWFYFIAKPMFMLMSYFYNLV 357
             +    ++   K +  +   +   +    F   +        F+AKP+F+LMSY   +V
Sbjct: 263 KNSMDFKIYGEPKRYKLLKEQDSGLIDTIDFGWFMFGRILLISFLAKPIFLLMSYLVGIV 322

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+L T+ +K++F PLA   Y S   M+++QP+I +L+ KFK      L +A+++
Sbjct: 323 HNYGVAIILVTILIKIIFSPLAYMSYKSIYEMQSLQPEIKKLQTKFKDDKA-ALNQALME 381

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPL GC P+L+QIPVF A+Y +++ ++E+R APF  WI DL+  DP       
Sbjct: 382 LYKERRVNPLGGCLPMLVQIPVFVALYNILNNTVELRQAPFILWIHDLSLKDPYY----- 436

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537
                         + PI+M ++M +Q K++P   D  Q  ++ ++PV+  F   +FPAG
Sbjct: 437 --------------VLPIVMGITMILQYKLNPSSPDPVQQKVMMFVPVIMTFFFLNFPAG 482

Query: 538 LIIYWSWSNVISIVQQAV 555
           L++YW  +NV++I QQ +
Sbjct: 483 LVLYWLVNNVLTIGQQYL 500


>gi|254457731|ref|ZP_05071159.1| 60 kDa inner membrane insertion protein [Campylobacterales
           bacterium GD 1]
 gi|207086523|gb|EDZ63807.1| 60 kDa inner membrane insertion protein [Campylobacterales
           bacterium GD 1]
          Length = 541

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 122/562 (21%), Positives = 230/562 (40%), Gaps = 66/562 (11%)

Query: 9   VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS 68
           +A+A+SVI   A+   +     E +   +K  Q     +  D S       ++    S+S
Sbjct: 2   LAVAMSVIFFVAYTAIFPPAEPENLAANKKVEQVKNVGSNQDASLQVSSNLEQTTGHSIS 61

Query: 69  P-----------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
                        + + N   I  ++  G +     L         +     L+  +  K
Sbjct: 62  EVEKYGSSDANTILTVTNKDFILKVDTLG-RISSKELLQDKFKTKED-KHAQLIPSTGMK 119

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDE 176
             +   LD +    +  +      ++     I    TP K+      ++++  + ++   
Sbjct: 120 PLFIRFLDEILNNESTRVA-----YSASINNIALDGTPQKVTLTQKLSSLVVTKELTFYA 174

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
              +    +++ +         +   +    +   N           +           +
Sbjct: 175 DGHYDAKISLSQD---------KRYFIYLGQRPKVNETEQMMTVTGAMVYTDDELVTIVE 225

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
              +           +   D+Y A++     + +     +   D    Y           
Sbjct: 226 DGDAEGRKTFSGVELISAFDQYSATMMYGFPKEANIIIERDRDDNPVLYF---------- 275

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
               +   T   + G KE+  + +       P     I++GWF F +KP+F L+S+ + +
Sbjct: 276 --DATQNMTFNGYVGQKEYKVLKNIN-----PVLTNAIEYGWFTFASKPLFQLLSWLHGI 328

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
            GN+G +I+  T+ ++ + +PL  K  +S   MK+I PKI EL+ K+ +S PQ +  A++
Sbjct: 329 FGNWGWSIIALTIMIRAVLYPLTYKGMMSMQRMKDISPKIKELQAKY-KSDPQRMNAAVM 387

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            +YK HN NPL GC P++LQIPVFFAIY+V+  ++E++ AP+  W+ DL+  D       
Sbjct: 388 DMYKKHNANPLGGCLPMILQIPVFFAIYRVLLNAVELQGAPWMLWVTDLSRMDDYY---- 443

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535
                          I PI+M  SMF Q +++P    D  Q  +  ++PV+F F   +FP
Sbjct: 444 ---------------ILPILMGASMFYQQRLTPNNFTDPMQEKVFKYLPVIFTFFFLTFP 488

Query: 536 AGLIIYWSWSNVISIVQQAVIM 557
           +GL++YW  +N+ SI QQ ++ 
Sbjct: 489 SGLVLYWFVNNLFSIGQQFIVN 510


>gi|224437877|ref|ZP_03658824.1| putative inner membrane protein translocase component YidC
           [Helicobacter cinaedi CCUG 18818]
 gi|313144326|ref|ZP_07806519.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313129357|gb|EFR46974.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 599

 Score =  235 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 122/598 (20%), Positives = 244/598 (40%), Gaps = 83/598 (13%)

Query: 6   NYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLID--DRA 62
              +A+ LS+     +  F    P+      +     T  Q      +    L +  D +
Sbjct: 15  RVLIAVGLSIAFFAVYAYFVPQKPKTHTSQAQNTQKTTESQAQTAPQTSQPTLENLQDSS 74

Query: 63  QALSMSPRVE---------------LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
            A+  +  +                +++      I+  G +   + L+           +
Sbjct: 75  PAIESADSISPTTTPQSLKQRIIAHIESDEFEIEIDALG-RIKQVYLKDEKFTRHEQQSL 133

Query: 108 VTLLSP---------------SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152
             ++                 S   ++    ++   T   +      T +          
Sbjct: 134 FGMIGEVLGFKSQAKAERDKLSLFGDSQLHTMEVRFTDTELNKKAFETPYVASVSHFKLG 193

Query: 153 TTPIKLVFKNA-NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
            TP +L       +++ ++ +++  +  + +   +                   +P    
Sbjct: 194 NTPYELTLTQNLGDVVLKKILTIHPNLRYDVRVEL------NKPDIEYFVSNGMRPTADP 247

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKS---SISNFHESNSWLGISDKYWASVFIPSKE 268
           +T+  +      + D  L + + SD         +     +S++   D+Y+ S+F    +
Sbjct: 248 DTYAFRGVVTRNVNDGVLTKIEDSDATADYLAKQAMDMRESSFVASVDRYYTSLFFTQAQ 307

Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328
              +      +  +     +F  N                + GAK +  +   +++    
Sbjct: 308 KGLYVVVSGDNAHNPMPYVRFVGNA-----------EFSGYIGAKFYKVLQGIDEN---- 352

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
               ++++G   F AKP+F+L+ Y Y+L GN+G AI+L T+ V+++ +PL  +  VS   
Sbjct: 353 -LTGVVEYGRITFFAKPLFLLLEYLYDLCGNWGWAIVLLTLIVRVVLYPLTYRGMVSMQK 411

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           +K++ PK+ EL+ ++K   PQ LQ  M+ LYK H  NP+ GC P++LQIPVFFAIY+V+ 
Sbjct: 412 LKDLAPKMKELQARYKD-DPQKLQIHMMDLYKKHGANPIGGCLPLILQIPVFFAIYRVLH 470

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
            ++E++ + +  WI DL+A DP                     + P++M LSM++  +++
Sbjct: 471 NAVELKSSAWILWIDDLSAIDPYF-------------------VLPVLMGLSMYVSQRLT 511

Query: 509 PPP-ADKGQAMILNWMPVV--FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           P    D  Q  I   +P V    F +  FPAGL++YW+ +N+ SI+QQ +I K+  ++
Sbjct: 512 PSNFTDPMQEKIFKMLPWVFTIFFIIFPFPAGLVLYWTVNNIFSIIQQMLINKVMESK 569


>gi|149919109|ref|ZP_01907593.1| 60 kDa inner membrane insertion protein [Plesiocystis pacifica
           SIR-1]
 gi|149820039|gb|EDM79460.1| 60 kDa inner membrane insertion protein [Plesiocystis pacifica
           SIR-1]
          Length = 580

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 121/591 (20%), Positives = 218/591 (36%), Gaps = 71/591 (12%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER---------------------KN 39
           ME      +A+ALS++I++ +      P   +                            
Sbjct: 1   MEMKHRIALAMALSILILFGYTYLVPSPEPTDDALAEQEGGSETGGETGDETGGSDDGAG 60

Query: 40  IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLK-GAQFDDLNLRG-- 96
                +P Q      A       Q      R+   N  L  +++ + G   + + L    
Sbjct: 61  APEAGEPAQPGQPVEASPAVPDTQIEKSEHRIA--NELLAVTVDSEPGGLINHIELLDDQ 118

Query: 97  YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156
           +    ++      L   +   +     L++   A+  +             +++      
Sbjct: 119 FRNRETNEGEDFLLFDEAAGSD---KTLEFGFLADETDFGWG----RGARAQLVEAGDDR 171

Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216
               +   ++    T++L + Y  K    V N   + +              +++     
Sbjct: 172 VRYVRRKGDVEVVETLTLLDGYEAKYEVLVRNFGKESVAHRVELTTRMGLGSSSSRYDVH 231

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275
                      SL E  + D+E        +    W G+  KY+    IP    +F    
Sbjct: 232 ---RALCRATDSLEEFTFDDVEDEEDVEKVKGGLHWFGVDSKYFLQAVIP--SETFSGCV 286

Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
                  +         +IT+ PG+  +    L+ GAK    +  + +   +   E +  
Sbjct: 287 VDSDGAGSGMVNTAIGRQITLEPGQQKSYEFGLYLGAKIDSMLGAFPESEGLEAAEGIAL 346

Query: 336 WGWFYF---------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
                +         +   M  L+ YFY L G +G+AI++ TV +KL   PL  KQY S 
Sbjct: 347 TDAIDWGWFGALSEYLGGMMLALLRYFYGLTGVWGVAIIMLTVVIKLTLLPLTIKQYRSM 406

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
             MK I P++  LREK+K    ++  + M  L+  H  +PL+GC P+LLQ P++ A+Y +
Sbjct: 407 RKMKEINPEMQALREKYKDDQVKM-NQEMQALFSRHGTSPLSGCTPMLLQFPIWIALYAM 465

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
           +   +++ H   + W+ DL   DP                     I PI M   MF+Q  
Sbjct: 466 LGAVVDLYHES-FLWLPDLTQPDPYY-------------------ILPIGMGALMFLQTS 505

Query: 507 MSPPP-ADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           M+P P  D+ QA ++ W MP VFV  +   P+GL +Y   +  +S++Q  +
Sbjct: 506 MNPNPGGDEMQAKMMKWMMPGVFVVMMLFLPSGLGVYIFANITLSLIQSFI 556


>gi|322437354|ref|YP_004219566.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp.
           MP5ACTX9]
 gi|321165081|gb|ADW70786.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp.
           MP5ACTX9]
          Length = 607

 Score =  234 bits (595), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 128/591 (21%), Positives = 222/591 (37%), Gaps = 66/591 (11%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYAA 55
           + N + F  +A+ +++    Q +      +  +        + N  T      V      
Sbjct: 14  QDNRSLFTIMAIMILVFAGLQFWRAKHNPQTASPNGQTQQQQANQPTPTVAASVAGQTIQ 73

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
           V       A + S  V ++N     + + KGAQ     L+ Y         +V  L  + 
Sbjct: 74  VPAVQPVVAAAESTTV-VENELYKITFSNKGAQATSWILKKYKDSYGQPLDLVHTL--AA 130

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
               Y   L     +    L N+  + +         T   K     +      +T S D
Sbjct: 131 QTVGYPLSLYTYDPSLTASLNNALYLPSATGNITAPQTLTFK---YVSGEYQVTKTFSFD 187

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
           + Y+      V  N        P   ++               G   V   +   E+  +
Sbjct: 188 DTYILHADTQVLRNGS------PIRALVAWPGGFGDQEDAKSYGGSQVDYSQEQKEKHLA 241

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH-----SQFKYLSDGHARYQAKFS 290
             + +  +  + S  W G SD Y+A++F+P    S       S                 
Sbjct: 242 VGKVTGGNTLNGSFDWAGASDLYFAAIFLPDAPDSATVATLDSSIIVPKANRHNGLGHGV 301

Query: 291 ANEITILPGK---------------SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
                  PGK               S  T   LFAG K    + +          E L+D
Sbjct: 302 PVAPKGEPGKDEIKVPIIGAAVGDLSGHTQTRLFAGPKAVAVLRNVHSAGNKTSLEPLLD 361

Query: 336 WGWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           +G+F  I K +F+ +   +  V  N+G  I++ TV + LL  PL  K   S   M+ IQP
Sbjct: 362 FGFFGIIGKYLFLALFAIHQYVTPNWGWCIVILTVLINLLILPLRIKTMQSGLKMQRIQP 421

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++D ++ ++K           +   ++QL K + +N   GC P L+Q+P+ FA + ++  
Sbjct: 422 QMDAVKARYKNLKVTDPKRNEMNAEIMQLQKDNGVNMFGGCVPTLIQMPLLFAFFGMLPK 481

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
            +E+R A ++ W+ DL++ADP +                   I PI+M +S F+    +P
Sbjct: 482 VVELRQAHWF-WLPDLSSADPYH-------------------ILPILMVISQFLVQFYTP 521

Query: 510 PPA-DKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            P  D  Q  ++ +M PV   +   ++ +GL +YWS  N+ISI  Q ++ K
Sbjct: 522 SPGVDPQQQKMMAFMMPVFSGYMTWNYSSGLALYWSVGNLISIATQFIMNK 572


>gi|116329466|ref|YP_799186.1| preprotein translocase, YidC subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116329930|ref|YP_799648.1| preprotein translocase, YidC subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|122282297|sp|Q04W30|OXAA_LEPBJ RecName: Full=Inner membrane protein oxaA
 gi|122282754|sp|Q04XE2|OXAA_LEPBL RecName: Full=Inner membrane protein oxaA
 gi|116122210|gb|ABJ80253.1| Preprotein translocase, YidC subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116123619|gb|ABJ74890.1| Preprotein translocase, YidC subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
          Length = 622

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 108/627 (17%), Positives = 233/627 (37%), Gaps = 69/627 (11%)

Query: 1   MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN-------S 52
           ME      F+A+ LS+ I      F+  P  ++ +  ++        ++ D        S
Sbjct: 1   MEDRQSRLFLALILSMGIWMGVNYFFFPPTPKKTSETKEVKVDKPSDDKQDQIQKEKKES 60

Query: 53  YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------LDVSSNSP 106
              +         S S +  +   S I   +  G +     ++ +       + V+   P
Sbjct: 61  RTTIPSKGTKIIPSESKKTLVVTESYIVEFSSLGGRISKFYVKDFTGPNGELVQVARKDP 120

Query: 107 IVTLLSPSNTKNAYFAE---LDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
              ++          +     D+  T + N    +          +     + +   F  
Sbjct: 121 ETLIVDGKTYYGVELSREKGFDFNFTDSLNELPHSEWNRIPFSLAENKADHSVVFSAFSP 180

Query: 163 ANNILFERTI-SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
                 ++T    D    FK+  +V N + +++ F+ +  +   +   +   F       
Sbjct: 181 DKTYQLKKTFRFFDRENYFKVTVSVINLTKEKLSFASQKNVQYLRTFGSLGPFPKDRPLN 240

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISD------------------------- 256
                              ++        W  I +                         
Sbjct: 241 DRDTANFFRFYHLDGSFNDTLDGSSSVGFWSSIVNFFTGNSGVDESFSLKTSTGGVDFAG 300

Query: 257 ---KYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313
              +Y+ +V  P                 +     +  N IT+ PG+        + G +
Sbjct: 301 TGSRYFIAVADPLDHKPQGIILDNRPKNESGAVLVY--NNITLGPGEVYNLDFASYVGIR 358

Query: 314 EFPTIHHYEKDLAIPR------------FEMLIDWGWFYFIAKPMFMLMSYFYNL-VGNF 360
           E   +  ++ +L   +                 + G        +  ++   Y   + N+
Sbjct: 359 ESIGMVFHDPELDPSQTKNSPFAGLSSDLNKSFNQGITTPFRNGIIWVLKQIYRFTIPNY 418

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G +I++  +  KL+F+PL +KQ  S   M+ + P++  + EKF    P++ Q+  ++LYK
Sbjct: 419 GWSIIIFAILFKLVFYPLNQKQAESMKKMQELSPQLKTINEKFAN-DPKMRQQKTMELYK 477

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
            +N+NP+ GC P+++QIP+F A+Y   S ++++ ++P + W+KDL+  D   +      +
Sbjct: 478 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSP-FLWVKDLSEPD---VIWTSPAI 533

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
           P++    + + +  ++M  +   Q +M+    D  Q M++  MPV+ ++   + P+G+ +
Sbjct: 534 PYFTQTGIGLNLLALLMVGTQIFQTRMTSVSMDPNQKMLMYVMPVMMLYIFWNMPSGVTL 593

Query: 541 YWSWSNVISIVQQAVIM--KMHGAEIG 565
           YW++ NV+SI QQ V    K   A+  
Sbjct: 594 YWTFQNVLSIGQQWVTNHLKKTEAKKK 620


>gi|325294818|ref|YP_004281332.1| Membrane protein oxaA [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065266|gb|ADY73273.1| Membrane protein oxaA [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 490

 Score =  233 bits (594), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 120/561 (21%), Positives = 218/561 (38%), Gaps = 79/561 (14%)

Query: 1   MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           ME+N    +  A  L+ I+V  +Q F+      +   E    +              V+ 
Sbjct: 1   MEKNKLLSIVQAALLAFILVLGFQFFFGKNEERKNVKEALKQEH-------------VVK 47

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
            D  ++  +   V++K P     I+    +   L ++ Y+  + S          S    
Sbjct: 48  VDIPESREIGKVVKVKTPLYSAEISTVNGKLLSLTVKKYNAQLVSE--------FSKKMG 99

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            +           + EL N +   ++    +      +KL     +   F + ++     
Sbjct: 100 IFPLMTISTDEKLSKELANISLTPSMKKVLVKDKAVILKLEGSLQDGRKFVKELTFYPDS 159

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
                         +        I    P    N              ++    +  + +
Sbjct: 160 Y---------RIDVKTELKGEKLITLIGPDIRVNEAHTSRMGHIGPVVETEKGIERLEPQ 210

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
           +       ++  W G  DKY+                   +         F  + I    
Sbjct: 211 EIKTPISFKNVKWAGEEDKYFLMAI-----KDTDFPVSIENINSHTVIKGFIGSGI---- 261

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
                     + G KE   +            +  ID+G F F+AKP      + +  + 
Sbjct: 262 ---------FYGGPKELNQLESL-------GMDKAIDFGIFGFLAKPFLKFFLFLHQFIP 305

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+G+ I++ T+ +K++  PL  K + S   M+ + PK++E++ K+K +P Q L + M++L
Sbjct: 306 NWGLVIIVLTILIKIILHPLTHKSFESMKKMQELAPKLEEIKNKYKDNP-QKLNEEMMKL 364

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK   +NP+ GC PILLQIP+FFA+Y++   ++E++ A  + W+ DL+  D T       
Sbjct: 365 YKEAGVNPMGGCLPILLQIPIFFALYEIFLNAVELKGAS-FLWVPDLSMPDSTF------ 417

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
                        I PI+M  SM +Q K++P   +  Q  I   M VVF F  +SFPAGL
Sbjct: 418 -------------IMPILMGASMILQQKLTPT-TNPQQEKIFMIMAVVFTFMFASFPAGL 463

Query: 539 IIYWSWSNVISIVQQAVIMKM 559
           ++YW  +N+I+ +Q  +I +M
Sbjct: 464 VLYWLTNNIITAIQNFIINRM 484


>gi|225848362|ref|YP_002728525.1| 60 kDa inner-membrane protein [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643468|gb|ACN98518.1| 60 kDa inner-membrane protein [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 514

 Score =  233 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 126/570 (22%), Positives = 239/570 (41%), Gaps = 69/570 (12%)

Query: 2   ERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           +      +  A+   +  ++    Q F+   + E   + +K     +      +    ++
Sbjct: 5   DMQKRMLIFFAVVSFLFISFTVISQFFFPENKKESPQSSQKQEINNQNIPIQTSGNFDLI 64

Query: 58  IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
           + +    L  S  +++K           G +   + +  Y+ D+ S+             
Sbjct: 65  LTNERVNLDTSKNIKVKTKFGYIEFTPFGGRITSVYVEKYNHDMISD------------- 111

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
              F++ + +     I    + T     S   ++             N+  E+T ++ + 
Sbjct: 112 ---FSKKNKIFIGELITSNPNLTRILNFSEYTVSQNNKEITFKLEKENVSIEKTYTIQDD 168

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
            +  I           +       +                         +  +    D 
Sbjct: 169 GVISIAVKTKGIENTSVALLSGVSLNSEGSFGHEGAIIK-----------TDKDLIRIDK 217

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
           E        ++  W G  +KY+  +F P   T+                   + +   +L
Sbjct: 218 ELKQPQIIRDNILWAGEENKYFLQIFAPKNGTN------------TVNVIPVAKDTTAVL 265

Query: 298 PGKSITTTNFLFAGAKEFPTI---HHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSY 352
              S     F+++GAK +  +     Y KDL     ++   ID+G+F  + KP+F+L+ +
Sbjct: 266 VNVSPDFEGFIYSGAKLYSILGQITDYYKDLWKVDLDLRSSIDFGFFGILGKPLFLLLHF 325

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
           FY  + N+G+AI++ TV +++LFFPL  K   +   M ++ P+I++L++K+ +  PQ LQ
Sbjct: 326 FYTYIPNWGVAIIILTVLIRILFFPLNHKSLKAMRKMADLAPEIEKLKKKYAK-DPQKLQ 384

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           + +++LY     NP++GC PIL+QIPVF A+Y V+ +++E+++APF  WIKDL+  DP  
Sbjct: 385 EEIMKLYAEAGANPMSGCLPILVQIPVFIALYNVLMVTVELKNAPFILWIKDLSDKDPYY 444

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532
                              I PI+M LSM  Q  ++P   DK Q MI+  M  VF F   
Sbjct: 445 -------------------ILPILMGLSMIAQQWITPSS-DKNQKMIMYIMAGVFTFMFM 484

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           +FPAGL++YW  +N++ ++Q  ++ K    
Sbjct: 485 NFPAGLVLYWLTNNILGLLQSFIVNKTMKK 514


>gi|315453617|ref|YP_004073887.1| inner-membrane protein, OxaA [Helicobacter felis ATCC 49179]
 gi|315132669|emb|CBY83297.1| inner-membrane protein, OxaA [Helicobacter felis ATCC 49179]
          Length = 552

 Score =  233 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 127/579 (21%), Positives = 239/579 (41%), Gaps = 68/579 (11%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
           E N    +AIALS + +  +  F+  P+  ++ +     Q    P+   ++       D 
Sbjct: 3   ENNLRLILAIALSFLFLAIYTYFFQTPQKTQVPS-ISTTQAPSAPSLAQSTPTPQAPLDN 61

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN--- 118
              ++      + +PS+   I+  G +   + L+        +   +  +      N   
Sbjct: 62  TPIIA-----HIHSPSIEIEIDALG-RIAQVYLKDKKFTTHKDEGFIDHVKRLMGMNHKP 115

Query: 119 ------------AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NN 165
                            L+     + +     +T +      +        L      + 
Sbjct: 116 LKPLEKLPLLGEGALKPLELRFVDSTLNQEAFHTPYKTSINDLKLTDDTQTLTLTQELSQ 175

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           ++ ++ ++   +  + +   +   +     +         +P    + +      +    
Sbjct: 176 VVVKKILTFHTNLSYDLKVEILPKTSVNTAYILS---NGSRPVADDDGYAFHGVLLGTQE 232

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
            K L + +  DI+++      +  +++   D+Y+             S F   +      
Sbjct: 233 -KKLEKIEDGDIKEAKS---FKDIAFIASVDRYY------------TSLFFSTTPLATII 276

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
            ++                    + G K+   +         P    +I++G   F AKP
Sbjct: 277 DSQTGTKNPLPFVSLKGNADLHGYIGPKDHRLLEQIS-----PMLTDVIEYGMITFFAKP 331

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F+L+ Y Y    N+G AI+L T+ ++++ +PL+ K  VS   +K++ PK+ EL+EK+ +
Sbjct: 332 VFLLLDYLYRYTHNWGWAIILLTLIIRIILYPLSYKGMVSMQKIKDLTPKMKELQEKY-K 390

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
           S PQ LQ  M+QLYK H  NPL GC P+LLQIPVFFAIY+V+  ++E++ A +  WI DL
Sbjct: 391 SDPQKLQMHMMQLYKKHGANPLGGCLPLLLQIPVFFAIYRVLYNAVELKSAEWIFWIHDL 450

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524
           +  DP                     I PI+M +SM+ Q  ++P    D  QA I   +P
Sbjct: 451 SLMDPYF-------------------ILPILMGISMYAQQVLTPSTITDPTQAKIFKMLP 491

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           + F   L +FPAGL++YW+ +N+ SI+QQ  I +M   +
Sbjct: 492 LFFTLFLITFPAGLVLYWTINNLFSILQQWGINQMLDRK 530


>gi|163789146|ref|ZP_02183589.1| putative inner membrane protein translocase component YidC
           [Flavobacteriales bacterium ALC-1]
 gi|159875559|gb|EDP69620.1| putative inner membrane protein translocase component YidC
           [Flavobacteriales bacterium ALC-1]
          Length = 633

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 113/626 (18%), Positives = 236/626 (37%), Gaps = 67/626 (10%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME      N  +   L   I+  W  +   P  EE+  ++K  +   +  +  +     L
Sbjct: 1   MEEKKFDINSIIGFVLIFGIML-WYFYQSKPTDEEIAAQKKAQEEQVETEKKVSKQEETL 59

Query: 58  IDDRAQ-----ALSMSPRV---------------------ELKNPSLIGSINLKGAQFDD 91
           +          AL  + +V                      ++        + KG    +
Sbjct: 60  VTSAEDYTNVKALDSTEQVALQSKVGSFANALNLPGEDITTVETDVFELKFSRKGGHLAE 119

Query: 92  LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151
           + L+ +   V  +S  + L+  +N+        +     ++    N+       S     
Sbjct: 120 VRLKNF---VDYDSVPIYLVKDNNS------AFNISFGTSDNRTLNTQDFPFQPSVTKSG 170

Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
             T + +  K + +   E    L  +         +     +   S    +   +     
Sbjct: 171 ENTVVSMKLKVSESAFLEYRYELKPNDYMIDFSIKSQGLSGEFNTSQPIILDWKQKSIRH 230

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
                 E     L  +   ++     +        +   WL     +++S+   +     
Sbjct: 231 AKSISYENRYTRLTYRHDGDKIDKLPQMGDDEETVDDVEWLSYRQHFFSSILASNDGALK 290

Query: 272 HSQFKYLS-----DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326
           +            +    +   ++        G  ++    L+ G  +  T+  YEK L 
Sbjct: 291 NVAMTSKDLVEDEEVDTLFTKLYTTKFPLAYNGGEVSKNFGLYYGPTDAKTLKTYEKGL- 349

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
                +   WG F +I K +F+ +  F +    +GIAI++ T+ VK++   +  KQ++S 
Sbjct: 350 --EESIPFGWGIFGWINKAVFIPLFGFLSGFLPYGIAIIVMTILVKIMLSFVQYKQFLSQ 407

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
           A MK ++P++D +R K K +  +  Q+  + L      +PL+GC P L+QIPVF+A++  
Sbjct: 408 AKMKILKPELDAIRAKHKDNKMKA-QQETMALQSKAGASPLSGCLPGLMQIPVFYALFMF 466

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
              + E+R    + W  DL++ D  ++  L   +PFY     HV ++PI+ ++++F  MK
Sbjct: 467 FPTAFELRQKS-FLWADDLSSFD--SVLDLPFNIPFYG---DHVSLFPILAAIAIFFYMK 520

Query: 507 MS---PPPADKGQA------MILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
           M+          Q        ++ +M    P++ +   +++ +GL +Y+  SN+ISI   
Sbjct: 521 MTTGQQMATQPTQEGMPDMGKMMKYMIYFSPLLMLVFFNNYASGLSLYYFVSNLISIGIM 580

Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYN 579
            VI      E  ++ ++  + +K   
Sbjct: 581 LVIKNYIIDEEKVLAKIEVSKTKPKK 606


>gi|94967248|ref|YP_589296.1| protein translocase subunit yidC [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549298|gb|ABF39222.1| protein translocase subunit yidC [Candidatus Koribacter versatilis
           Ellin345]
          Length = 583

 Score =  232 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 112/603 (18%), Positives = 231/603 (38%), Gaps = 66/603 (10%)

Query: 5   WNYFVAIALSVIIVYAWQ--NFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
               +  AL+ I++   Q   F   P+ ++  N++      +      ++ A        
Sbjct: 15  RKLLLIFALTFIMIVIGQTVFFKNIPKKQDDKNQKSAPVAAQTSQPAASAPAVATPAVAK 74

Query: 63  QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122
           QA + +  V ++N         +GAQ     L+ Y       +P+  +   +  +  Y  
Sbjct: 75  QAQAETETV-VENAVSRIVFTNRGAQVKSWVLKNYKD--DHGNPLELVNREAAKQFGYPL 131

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182
                      +L ++  V +      +      +    +  ++  ++T+     Y+  +
Sbjct: 132 SFFTYDQGLTTKLNDAMYVASATGRIEVPGELTFEF---SDGDLSAKKTLRFTNGYVVGV 188

Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242
             +VT    +               Q  +         IA      +  Q    I   + 
Sbjct: 189 ETSVTRGGSNVTALPAWPSGFGDDVQPTS----YALQAIAYENSGEVERQTGKKIVGGAT 244

Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL----------SDGHARYQAKFSAN 292
                  +W G  D+Y+A++F+P    +      +            D +         +
Sbjct: 245 LR--GPFNWAGAQDQYFAALFLPDNPPAASMVTLHNTLKIPADLDKPDPNKTQPVDVIGS 302

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKD-----LAIPRFEMLIDWGWF-YFIAKPM 346
            +  L G ++T    LF G K    +   + +        P    ++D+G +  FIAKP+
Sbjct: 303 AVGDLSGPTVT---RLFVGPKALHILESVKSNAAPGQPNGPDLSKVVDFGKYLGFIAKPL 359

Query: 347 FMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK--- 402
           F+ + + + + V N+G +I++ TV + L+  PL      S   M+ IQP++  ++EK   
Sbjct: 360 FLWLRWTHDHWVPNWGWSIIILTVIINLVLLPLRLSSMKSALKMQKIQPQMKAIQEKYKK 419

Query: 403 --FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
                     +   M  LYK H++NP+ GC P+++Q+P   A Y ++++++E+R A ++ 
Sbjct: 420 YKMNDPKRADMNTEMAALYKQHSVNPVGGCLPLVIQMPFLIAFYGMLAVAIELRQANWF- 478

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI 519
           W+ DL+  D                   H+ I P+++  S  +  +M+P    D  Q  +
Sbjct: 479 WLHDLSGPD-------------------HLYIIPVLIVASTILMQRMTPQAGIDPAQQKM 519

Query: 520 LNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           +  M P    +    + +GL +YW   N+I   QQ ++      +  L   + +  +K  
Sbjct: 520 MTIMMPAFLGWISLRYASGLGLYWIVGNIIGFAQQFIMN-----KTELGREIAAVRAKQA 574

Query: 579 NSQ 581
           N +
Sbjct: 575 NKR 577


>gi|152993157|ref|YP_001358878.1| inner membrane protein translocase component YidC [Sulfurovum sp.
           NBC37-1]
 gi|151425018|dbj|BAF72521.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 539

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 124/573 (21%), Positives = 242/573 (42%), Gaps = 65/573 (11%)

Query: 1   MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME+   N    +A+ALS  +   +   +   +      +  +     +     ++  +  
Sbjct: 1   MEQQDLNKRLLLALALSFFVFVGYSYLFPPQKQVAQTEQNISNTQTPKAVTTQSTPKSTP 60

Query: 58  ID----DRAQALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
           ++      A   + S +V   + + +   +I+  G +     L       +    +  L 
Sbjct: 61  VNMDKAQNAPKNTASEKVLATVTSNTFKITIDEFG-RIAQYELLEAKYKDAEGHNLQIL- 118

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
               T      E+ +     N E   +    +  +   ++    I ++ +  + +   + 
Sbjct: 119 ---GTNEVKPLEVRFSDAKINDEAFKTPYTLDGSASVDVSSNAQILILTQKLSALTVTKK 175

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
           I++     + I  T           +P      H+P   ++ + +  G +    D  +  
Sbjct: 176 ITIKPDGSYDIDVT-------TSAPAPYFITPGHRPMADSSRYMLVRGALVEGADGVITT 228

Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
               D   +  +   ++       D+Y A++            F     G      K   
Sbjct: 229 IPDGD---AKGTETFKNAKIASAFDRYVATM------------FYDFKKGMNVSILKVGN 273

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
           ++  I            + G KE+  + +       P     I++GWF F++KP F ++ 
Sbjct: 274 DDPLIFVEGGQNLHLGGYIGPKEYNILKNIN-----PELTNTIEFGWFTFLSKPFFKVLL 328

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           + + L+GN+G AI+L T+ VKL  FPL+ K  +S   +K++ PK+ +L+ K+K  P ++ 
Sbjct: 329 WIHGLIGNWGWAIILFTLLVKLTLFPLSYKGMMSMQKLKDLAPKMKDLKAKYKGDPAKLN 388

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADP 470
            + M++LYK +  NP+ GC P++LQIPVFFA+Y+V+  + E++ A +  GWI +LA ADP
Sbjct: 389 AQ-MMELYKKNGANPMGGCLPMILQIPVFFALYRVLLNADELQGAAWIPGWINNLAVADP 447

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF-- 527
                                + P++M +SM+ Q +++P    D  Q  I  W PV+   
Sbjct: 448 YY-------------------VLPVLMGISMWFQQRITPNNFTDPLQEKIFKWFPVLMAG 488

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
           +F +  FP+GL++YW  +N  +I QQ VI + +
Sbjct: 489 MFIIMPFPSGLVLYWVVNNTFTIGQQYVINRAY 521


>gi|255034943|ref|YP_003085564.1| putative inner membrane protein translocase component YidC
           [Dyadobacter fermentans DSM 18053]
 gi|254947699|gb|ACT92399.1| 60 kDa inner membrane insertion protein [Dyadobacter fermentans DSM
           18053]
          Length = 602

 Score =  231 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 112/591 (18%), Positives = 221/591 (37%), Gaps = 33/591 (5%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N+ + + L ++++  +Q     P       E K    V +P+ V +         
Sbjct: 1   MD--KNFVIGLVLIMLMLIGYQILVPKPVEPTPVAEVKKE--VSKPSSVTSDTTQNSSQS 56

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + ++          KG    ++ L+ Y      +   + L++ ++ K   
Sbjct: 57  VDSLAIPQKDLVIETKDARVVFTNKGGVMKEVMLKNYKT---YDQKPLYLIAENHNK--- 110

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
           F       T +      + T            +  I       NN   E+T  +      
Sbjct: 111 FQIDLPTQTGDVRLTNQTFTTDAQDRTLAEGDSAVITYRATIKNNQTVEQTYVVRGTGY- 169

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
            ++D     S              +      N        + V      ++   +    +
Sbjct: 170 -VIDYGIKASGALPANKSVEFHWDNDLLQLENDMKKNREVVTVNYYTDELKSLATSPTSN 228

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF--SANEITILP 298
                 +   W  I  KY+ +  I  K    +   +   +       K       I    
Sbjct: 229 EEEKTADPVKWFTIKHKYFLAGLIAEKHPLTNVTVRANVNPEDSVIVKNMNVFAGIPTAA 288

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY---FIAKPMFMLMSYFYN 355
            +        + G  E+  +   + +     F+  +  G+ +        +  L +    
Sbjct: 289 VQKGEANFQFYLGPNEYHIVDKVKAE----NFDQNVYLGYAFLKPINKFFLVPLFNLIEG 344

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            V N+G+ I+L  +FVK L  PL  K Y+S A M+ + P+++++RE+ K    +  Q+  
Sbjct: 345 FVSNYGLLIILLVLFVKTLLTPLTYKSYISMAKMRILGPELEQIREQNKDDLAK-QQQEQ 403

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LY+   ++PL+GC P+L  +P+ F+++ +    +E+R    + W  DL+  D  + F 
Sbjct: 404 MKLYQQVGVSPLSGCVPVLATMPILFSLFFLFPNLIELRQQS-FLWADDLSTYD--SFFK 460

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADKGQAMIL-NWMPVVFVFA 530
           L   +PF +    H+ ++ I+M+ S     +   + +P          L   MP++F+F 
Sbjct: 461 LPFEVPFGIGN--HISLFTILMTASSIGYAYYNNQNTPTQPGPVNMKALGYVMPLMFMFI 518

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           L+SFPAGL  Y+  SNV++I QQ +I K    E  + + L     KN   +
Sbjct: 519 LNSFPAGLTFYYFVSNVVTIAQQLLI-KRFVNEDKIKNILEENRKKNATGE 568


>gi|187735748|ref|YP_001877860.1| 60 kDa inner membrane insertion protein [Akkermansia muciniphila
           ATCC BAA-835]
 gi|187425800|gb|ACD05079.1| 60 kDa inner membrane insertion protein [Akkermansia muciniphila
           ATCC BAA-835]
          Length = 628

 Score =  231 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 122/547 (22%), Positives = 236/547 (43%), Gaps = 44/547 (8%)

Query: 35  NERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSI---NLKGAQFDD 91
                  +V +  + D +    L+  +       P +      + GSI    L     D 
Sbjct: 56  TSAPEQASVNKALEEDKTAPITLVATQEVNGRQEPFITYTFNRIGGSIGTVTLHNDIVDS 115

Query: 92  LNLRGYHLDVSSNSPI---VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK 148
             +  +++ ++          + +   T++  +    Y       +            G 
Sbjct: 116 QKVADHNITINEAQQRGIGELVFNMDATQDPSYDNTVYKEAKRTADSVTL-------EGY 168

Query: 149 ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208
                  I   +        E  +     YL ++  ++ N S +       G        
Sbjct: 169 DPARQLFISKTYTLHPVKNLEGEVLPGSKYLIRLTVSLLNKSPNVQDLRYMGIFGGSAYP 228

Query: 209 TATNTFGVQEGFIAVLGDKSLVEQ--------KYSDIEKSSISNFHESNSWLGISDKYWA 260
            A +             D SL ++         +S  +   +    +  ++ G+  +Y+A
Sbjct: 229 IAKSEPKDTYTHFFYHADGSLEQEVPSYFTGGFFSSAKARVLEGPLQDLTYAGVMSQYYA 288

Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQ---------AKFSANEITILPGKSITTTNFLFAG 311
           ++ +P  ++   + +    +    ++                +T+ P +  T T  ++ G
Sbjct: 289 TILLPQDQSRGSTVYATRQEFPLTHEGNTLVPGVTVAMGIPNLTMAPNEIKTLTYDIYTG 348

Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371
            K    +     +L+ P    ++ +GW  F++ PM  L++ F+   GN+G+AI+  T+ V
Sbjct: 349 PKFNAYLRDL--NLSYPAISDIMAYGWLVFLSVPMNWLLNLFHGWFGNWGVAIICMTIVV 406

Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431
           + L +PL KK Y++   M  +QP++ +L+EK+    PQ +   M++LY+ + INP +GC 
Sbjct: 407 RALIWPLHKKSYMAMKRMSLVQPEMVKLKEKYPD-DPQKVNMEMMKLYQKYGINPASGCV 465

Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491
           P+L+QIP+FFA Y+V+  S E+R  PF  W+ DL+  D   +  LFG         + + 
Sbjct: 466 PMLIQIPIFFAFYRVLQYSAELRGQPFCLWMTDLSLPD--TVGHLFG---------VPIN 514

Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           I P+IM+++M IQM+M+P   ++ Q +I+N MPV+F     +F + L +YW+  N+ISI 
Sbjct: 515 ILPLIMAVTMIIQMRMTPQAGERSQRIIMNLMPVMFFLFCYNFASALALYWTTQNLISIG 574

Query: 552 QQAVIMK 558
           Q A+I +
Sbjct: 575 QTALIRR 581


>gi|294056003|ref|YP_003549661.1| membrane protein insertase, YidC/Oxa1 family [Coraliomargarita
           akajimensis DSM 45221]
 gi|293615336|gb|ADE55491.1| membrane protein insertase, YidC/Oxa1 family [Coraliomargarita
           akajimensis DSM 45221]
          Length = 604

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 123/626 (19%), Positives = 225/626 (35%), Gaps = 88/626 (14%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN--------NERKNIQTVKQPNQVDNSY 53
               N F+ I L +     +  +      E+           E +++ T      +  S 
Sbjct: 1   MDKKNTFLGI-LFLAAGLGFMFWQSAQVQEQQQQEAYEQAIAEEESLATTPSDVAISASN 59

Query: 54  AAVLIDDRAQAL-----------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96
           A       A  L                 +    V L N  +    +  G    ++    
Sbjct: 60  AGEGAAPVADLLVKEVAQAPVEQVPVVDPAEVKTVVLANDFIEVEFSSLGGAIKEVRFLQ 119

Query: 97  YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST--ANNIELPNSNTVWNLISGKILTPTT 154
                          +    ++ Y      +    +  +++        L     +    
Sbjct: 120 ---------------TKRGGRDDYVFNESGLLPALSLGLDVNGELQELTLNYAIEVQDEY 164

Query: 155 PIKLVFKNANNILFERTISLD------EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208
            I       N ++  R  S+       + YL K   TV N S   I  +     +     
Sbjct: 165 SITFALDAGNGLILRRNYSIRNGEGDFDPYLVKHTTTVANQSEAPIALNNIYLNLGTVRP 224

Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYS------------DIEKSSISNFHESNSWLGISD 256
                           GDK+                      K  I   +    W  + +
Sbjct: 225 IVEKALPNYLNVGFYNGDKAKFTPINKLSGGSGFLGIGASSPKDEIVFDNTRVEWASVKN 284

Query: 257 KYWASVFIPSKETSFHSQFKY-------LSDGHARYQAKFSANEITILPGKSITTTNFLF 309
           +++  V    +       +                          TI  G +       +
Sbjct: 285 QFFTGVLSSEEVAKELYIYPVEMPKTGDTKPERPGITGSVGYELGTIAAGSAKALDFEYY 344

Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369
            G KEF  +            + ++ +G+F FI+K +   M   ++LV N+G++I++ T+
Sbjct: 345 VGPKEFKRLQSLGNYQ-----DKIMQFGFFSFISKLLLSFMYLIHSLVPNWGLSIVIMTI 399

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429
            +K++F+PL  K   S   M  IQ  + EL+EKFK +P Q +Q+  ++L++ H +NPLAG
Sbjct: 400 CIKMIFWPLTAKASKSQKRMAKIQGPMAELKEKFKDNP-QKMQQETLKLFREHRVNPLAG 458

Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489
           C P+ +Q+P+F  ++ ++  + E+R    + W+ DL+  D       F            
Sbjct: 459 CLPLFVQMPIFLGLFYMLRTASELRFES-FLWVSDLSQPDTMFHIAGF-----------P 506

Query: 490 VGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
           V I P+IM ++MF+QM M P  P AD  Q  I  ++P VF+  L +F +GL++YW+  N+
Sbjct: 507 VNILPLIMGVTMFLQMSMMPVSPTADPAQQKIFKFLPFVFLIFLYNFSSGLVLYWTVQNI 566

Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRST 573
           ++IVQQ +   M    +      ++ 
Sbjct: 567 LTIVQQKITNAMPDEPVPATASAKAG 592


>gi|309379512|emb|CBX21878.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 299

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 98/285 (34%), Positives = 147/285 (51%), Gaps = 25/285 (8%)

Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
                     Y A        I  G    T   L+AG +    I          + ++  
Sbjct: 28  IDIKRGNDKLYSASVGVPLAAIPAGAKAETAVNLYAGPQTTSVIAGIAD-----KLQLAK 82

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           D+G  ++ A P+F L++  +N++GN+G AI++ T+ VK + +PL    Y S A M+   P
Sbjct: 83  DYGKVHWFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAP 142

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           K+  ++EK+        Q+AM+QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R
Sbjct: 143 KLQAIKEKYGD-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELR 201

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
            AP+ GWI DL+ +DP                     I PIIM+ +MF Q  ++PPP D 
Sbjct: 202 QAPWLGWITDLSRSDPYY-------------------ILPIIMAATMFAQTYLNPPPTDP 242

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            QA ++  MP+VF      FPAGL++YW  +N+++I QQ  I + 
Sbjct: 243 MQAKMMKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 287


>gi|189461403|ref|ZP_03010188.1| hypothetical protein BACCOP_02058 [Bacteroides coprocola DSM 17136]
 gi|189431932|gb|EDV00917.1| hypothetical protein BACCOP_02058 [Bacteroides coprocola DSM 17136]
          Length = 617

 Score =  230 bits (586), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 104/603 (17%), Positives = 221/603 (36%), Gaps = 39/603 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYA 54
           M+   N  V  AL   ++  +  +    + E    +      +   Q  +Q  +     A
Sbjct: 1   MD--KNTLVGFALIGAVIVGFGIYNRPSQKEMARAQHYQDSIQAVAQKQEQMQKAQEIAA 58

Query: 55  AVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
           ++ +   + +L             L+N  L  + + KG +     L+ Y+         +
Sbjct: 59  SLPVVPDSTSLFFQASQGSEEFTTLENDVLQLTFSNKGGRVCKAMLKEYN---DQQQQPL 115

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
            L    +      A L       N  + ++   +      +   T  ++L   N  ++ F
Sbjct: 116 VLFDGKD------ASLSLGFEGKNENILSNQMYFQTT--NVTDSTVTMRLNAANGGHLDF 167

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
              +  + + +   V      +             + + +     +  ++ + ++     
Sbjct: 168 IYKLLPNSYVVDFTVQASGLQNFFSPSVKTMSVDWKQRARQMEKGYTFEQRYTSLTYKPV 227

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
                Y    K       E   W+   ++Y++ VF+  K     +    +    + Y   
Sbjct: 228 DDSFDYLSETKDEKETIPEVLDWVAFKNQYFSCVFMAEKNFENATLESKIEQKGSGYMKN 287

Query: 289 FSANEIT-ILPGKSITTTNFLFAGAKEFPTIHH------YEKDLAIPRFEMLIDWGWFYF 341
           ++A   T   P  +  +    + G   F T+         +KD  +     L        
Sbjct: 288 YTAEMKTAFDPTGAQPSRFQFYFGPNHFKTLLATNDLSFKDKDQELEDLVYLGWPIIRLI 347

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
                  L  +  +   + GI I+L T+ VK+L  P   K ++S+A M+ ++P +D++  
Sbjct: 348 NRWFTINLFDWLSSWGLSMGIVILLMTIIVKILVLPTTWKSFISSAKMRALKPYVDKINA 407

Query: 402 KFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           K+ +       Q+  + LY  + ++P+ GC P+L+Q PVF A++  +  ++E+R    + 
Sbjct: 408 KYPKQEDALKKQQETMALYSQYGVSPMGGCLPMLIQTPVFMALFFFVPNAIELRQQS-FL 466

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           W  DL+A D    ++    L         +   +  ++  + M  Q  M   P       
Sbjct: 467 WASDLSAYDDLISWSTHIPLLGNHLSLFCLLFSVTTVLNQIIMMKQQDMGNNPQMAAMKW 526

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           ++  MPV+F F  + + +GL  Y+  S +I I+    IM+    E  L+ +L +   K  
Sbjct: 527 MMYIMPVMFFFIFNEYASGLSYYYFISGLIGII-TMWIMRRMTDEKKLLAQLEAN--KKA 583

Query: 579 NSQ 581
            S+
Sbjct: 584 PSE 586


>gi|333031174|ref|ZP_08459235.1| Membrane protein oxaA [Bacteroides coprosuis DSM 18011]
 gi|332741771|gb|EGJ72253.1| Membrane protein oxaA [Bacteroides coprosuis DSM 18011]
          Length = 622

 Score =  230 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 90/611 (14%), Positives = 225/611 (36%), Gaps = 47/611 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  +   L  +++  +  F+  P  E++   ++   ++        +        
Sbjct: 1   MD--KNTIIGFVLIGLLLVGFN-FFTRPSEEQVAAMKQYNDSITAVQAEQEAQTEKHTAA 57

Query: 61  RA---------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
            +                +        L+N  +  + + KG +     L+ Y        
Sbjct: 58  LSHVAPIKVDSTSLFYNASEGTEQFTTLENDVMKVTFSNKGGRVYSAELKEYKNQGDEKG 117

Query: 106 PIVT-LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
              T L+   + +N++           N      +  +      +      ++L+  + +
Sbjct: 118 ENKTNLVLFKDQENSFNFNFY------NQNEVIQSKDYFFTPVNVSETGLTMRLMADSNS 171

Query: 165 NILFERTISLDEHYLFKIVDTVTNNS--IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
            I F  ++  +    + +   +                     +       +  +     
Sbjct: 172 YIDFIYSLDSENKEDYLVNFQIKATGMEGKLAHNDYIDIDWAQRTPQHEQGYVFENRHSR 231

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
           +       + +     ++      ++ +W+    +++++VFI  +            +  
Sbjct: 232 LTYRTFDKDTERLTAAEAVTETPEKNLNWIAFRSQFFSTVFITDQGFKNSKLTSTPEEKG 291

Query: 283 ARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDWGWF- 339
           + Y   + A   T   P     T  +L+ G   + T+   + D     +   ++D GW  
Sbjct: 292 SGYIKDYKAEMKTFFDPSGKEATQMYLYLGPNHYKTLKAIDSDKDHKWKLNSVVDLGWPI 351

Query: 340 --YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
                      +  +  +L  + G+ +++ T+ VK + +P  KK Y+S+A M+ ++P++D
Sbjct: 352 VKQINQWFTINIFDWLTHLGMSMGVVLLIMTIIVKAIVYPATKKTYMSSAKMRVLKPQVD 411

Query: 398 ELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
            +  K+         Q+ ++ LY  + ++P+ GC P+LLQ P+  A++  +  ++E+R  
Sbjct: 412 AINAKYPNQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQE 471

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP------ 510
             + W  DL+  D    F     L        H+ I+ ++M+++  +  K +        
Sbjct: 472 S-FLWATDLSTYDALIKFPFHIPLLGD-----HLSIFCLLMTVTNILNTKYTMAQQNTGA 525

Query: 511 -PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            P       ++  MP++F+F L+ +P+GL  Y+  S +IS++   + ++    E  L+ +
Sbjct: 526 QPQMPAMKWMMYLMPIMFLFILNDYPSGLCYYYFLSTLISVM-TMIFLRKTTDEEKLLAK 584

Query: 570 LRSTFSKNYNS 580
           L +  +     
Sbjct: 585 LEANKNTEKKK 595


>gi|212693128|ref|ZP_03301256.1| hypothetical protein BACDOR_02635 [Bacteroides dorei DSM 17855]
 gi|212664233|gb|EEB24805.1| hypothetical protein BACDOR_02635 [Bacteroides dorei DSM 17855]
          Length = 622

 Score =  230 bits (585), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 108/608 (17%), Positives = 233/608 (38%), Gaps = 48/608 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE--RKNIQTVKQPNQVDNSYAAVLI 58
           M+   N  V  AL   +V  +  +    + E    +  + +IQ + Q      + AA   
Sbjct: 1   MD--KNTLVGFALIGAVVIGFSIYNRPSQEEMARAKHYQDSIQAIAQKEAERQAQAATTQ 58

Query: 59  DDRA------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
              A             +        L+N  +  +   KG +     L+ Y+     +  
Sbjct: 59  SQNATLHLDSTSMFYGASQGAEQLTTLENNVVKLTFTNKGGRVCAAILKDYN---GQDGK 115

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
            + L    ++       +++     N  +   +  +      +   T  ++L   N   I
Sbjct: 116 PLMLFDEKDS------GMNFAFEGKNENILTEDMYFQPT--NVTDSTVTMRLAANNGGYI 167

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
            F+  +  D + +   +      +      +      R + +     F  ++ + ++   
Sbjct: 168 DFDYKLLPDAYMVNFTIRANGMQNFFPPALNTVNINWRQRARQLEKGFSFEQRYTSLTYK 227

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
                  Y +  K +  +  +   W+   +++++SV I  ++    S         + Y 
Sbjct: 228 PVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTSTPQQEGSGYM 287

Query: 287 AKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYE------KDLAIPRFEMLIDWGWF 339
             ++A+  T   P    +T    + G   F T+ +        KDL +     L      
Sbjct: 288 KNYTADMTTFFDPTGKQSTNMQFYFGPNHFKTLLNSNDLSLSQKDLELEDLVYLGWPIIR 347

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +        L  +      + G+ ++L T+ VK+L +P   K Y+S+A M+ ++P I+E+
Sbjct: 348 WVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSAKMRVLKPYINEI 407

Query: 400 REKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
             K+ +       Q+  + LY  + ++P+ GC P+L+Q+PVF A++  +  ++E+R    
Sbjct: 408 NAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFFVPNAIELRQQS- 466

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W  DL+  D  +I      +P       H+ ++ ++ S++  +    +    D GQ  
Sbjct: 467 FLWAPDLSTYD--DIINWGTNIPLLGN---HLSLFCLLFSITNILNTMYTMKQQDMGQQQ 521

Query: 519 I------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           +      +  MPV+F+F  + + +GL  Y+  S +I I+   VI++    E  L+  L +
Sbjct: 522 MPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGIL-TMVILRKTTDEKKLLAMLEA 580

Query: 573 TFSKNYNS 580
              K    
Sbjct: 581 RKEKKSQK 588


>gi|237725457|ref|ZP_04555938.1| inner membrane protein oxaA [Bacteroides sp. D4]
 gi|229436144|gb|EEO46221.1| inner membrane protein oxaA [Bacteroides dorei 5_1_36/D4]
          Length = 622

 Score =  229 bits (584), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 106/608 (17%), Positives = 232/608 (38%), Gaps = 48/608 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE----------EMNNERKNIQTVKQPNQVD 50
           M+   N  V  AL   +V  +  +    + E               +K  +   Q     
Sbjct: 1   MD--KNTLVGFALIGAVVIGFSIYNRPSQEEMARAKHYQDSIQAIAQKEAERQAQATTTQ 58

Query: 51  NSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
           +  A + +D  +     +        L+N  +  +   KG +     L+ Y+     +  
Sbjct: 59  SQNATLHLDSTSMFYGASQGAEQLTTLENNVVKLTFTNKGGRVCAAILKDYN---GQDGK 115

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
            + L    ++       +++     N  +   +  +      +   T  ++L   N   I
Sbjct: 116 PLMLFDEKDS------GMNFAFEGKNENILTEDMYFQPT--NVTDSTVTMRLAANNGGYI 167

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
            F+  +  D + +   +      +      +      R + +     F  ++ + ++   
Sbjct: 168 DFDYKLLPDAYMVNFTIRANGMQNFFPPALNTVNINWRQRARQLEKGFSFEQRYTSLTYK 227

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
                  Y +  K +  +  +   W+   +++++SV I  ++    S         + Y 
Sbjct: 228 PVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTSTPQQEGSGYM 287

Query: 287 AKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYE------KDLAIPRFEMLIDWGWF 339
             ++A+  T   P    +T    + G   F T+ +        KDL +     L      
Sbjct: 288 KNYTADMTTFFDPTGKQSTNMQFYFGPNHFKTLLNSNDLSLSQKDLELEDLVYLGWPIIR 347

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +        L  +      + G+ ++L T+ VK+L +P   K Y+S+A M+ ++P I+E+
Sbjct: 348 WVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSAKMRVLKPYINEI 407

Query: 400 REKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
             K+ +       Q+  + LY  + ++P+ GC P+L+Q+PVF A++  +  ++E+R    
Sbjct: 408 NAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFFVPNAIELRQQS- 466

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W  DL+  D  +I      +P       H+ ++ ++ S++  +    +    D GQ  
Sbjct: 467 FLWAPDLSTYD--DIINWGTNIPLLGN---HLSLFCLLFSITNILNTMYTMKQQDMGQQQ 521

Query: 519 I------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           +      +  MPV+F+F  + + +GL  Y+  S +I I+   VI++    E  L+  L +
Sbjct: 522 MPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGIL-TMVILRKTTDEKKLLAMLEA 580

Query: 573 TFSKNYNS 580
              K    
Sbjct: 581 RKEKKSQK 588


>gi|237709873|ref|ZP_04540354.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|265753525|ref|ZP_06088880.1| inner membrane protein oxaA [Bacteroides sp. 3_1_33FAA]
 gi|229455966|gb|EEO61687.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263235239|gb|EEZ20763.1| inner membrane protein oxaA [Bacteroides sp. 3_1_33FAA]
          Length = 622

 Score =  229 bits (584), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 106/608 (17%), Positives = 232/608 (38%), Gaps = 48/608 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE----------EMNNERKNIQTVKQPNQVD 50
           M+   N  V  AL   +V  +  +    + E               +K  +   Q     
Sbjct: 1   MD--KNTLVGFALIGAVVIGFSIYNRPSQEEMAHAKHYQDSIQAIAQKEAERQAQAATTQ 58

Query: 51  NSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
           +  A + +D  +     +        L+N  +  +   KG +     L+ Y+     +  
Sbjct: 59  SQNATLHLDSTSMFYGASQGAEQLTTLENNVVKLTFTNKGGRVCAAILKDYN---GQDGK 115

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
            + L    ++       +++     N  +   +  +      +   T  ++L   N   I
Sbjct: 116 PLMLFDEKDS------GMNFAFEGKNENILTEDMYFQPT--NVTDSTVTMRLAANNGGYI 167

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
            F+  +  D + +   +      +      +      R + +     F  ++ + ++   
Sbjct: 168 DFDYKLLPDAYMVNFTIRANGMQNFFPPALNTVNINWRQRARQLEKGFSFEQRYTSLTYK 227

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
                  Y +  K +  +  +   W+   +++++SV I  ++    S         + Y 
Sbjct: 228 PVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTSTPQQEGSGYM 287

Query: 287 AKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYE------KDLAIPRFEMLIDWGWF 339
             ++A+  T   P    +T    + G   F T+ +        KDL +     L      
Sbjct: 288 KNYTADMTTFFDPTGKQSTNMQFYFGPNHFKTLLNSNDLSLSQKDLELEDLVYLGWPIIR 347

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +        L  +      + G+ ++L T+ VK+L +P   K Y+S+A M+ ++P I+E+
Sbjct: 348 WVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSAKMRVLKPYINEI 407

Query: 400 REKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
             K+ +       Q+  + LY  + ++P+ GC P+L+Q+PVF A++  +  ++E+R    
Sbjct: 408 NAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFFVPNAIELRQQS- 466

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W  DL+  D  +I      +P       H+ ++ ++ S++  +    +    D GQ  
Sbjct: 467 FLWAPDLSTYD--DIINWGTNIPLLGN---HLSLFCLLFSITNILNTMYTMKQQDMGQQQ 521

Query: 519 I------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           +      +  MPV+F+F  + + +GL  Y+  S +I I+   VI++    E  L+  L +
Sbjct: 522 MPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGIL-TMVILRKTTDEKKLLAMLEA 580

Query: 573 TFSKNYNS 580
              K    
Sbjct: 581 RKEKKSQK 588


>gi|302336556|ref|YP_003801762.1| membrane protein insertase, YidC/Oxa1 family [Spirochaeta
           smaragdinae DSM 11293]
 gi|301633741|gb|ADK79168.1| membrane protein insertase, YidC/Oxa1 family [Spirochaeta
           smaragdinae DSM 11293]
          Length = 585

 Score =  229 bits (584), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 110/596 (18%), Positives = 222/596 (37%), Gaps = 43/596 (7%)

Query: 1   MERNWNYFVAIALSVIIV-YAW---QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M+      +A+ LS I++   +     F+  P  E      +   +        +  +  
Sbjct: 1   MD--KRTLLAVILSTIVISVGFMIQNTFFAPPLPESPAVTEQAEASGNTNASDGSVSSND 58

Query: 57  LIDDRAQAL-------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
               +  A                   V L       + + +GA    + L+ +      
Sbjct: 59  NSQQQPTAPVLQAQGIIPFGDEPGEKMVSLDTKVFKATFSSRGALLTSMKLKEHFE---- 114

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
           N   + ++   N     F             +P      +  + +               
Sbjct: 115 NGEPLEMIWRGNDAEGAFGISFGGPEREIAHVPFFVRNIDENTLEFYREFAVQTSSGPVP 174

Query: 164 NNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
             +      +  ++ +   +    + N+   +        +   PQ       +   +  
Sbjct: 175 FTLTKRFRFNPSDYLFEVLVKIENSVNAYPALDEDGYAYTLSFGPQIGPQVEKMDGRYAY 234

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                    ++ +   K+   +     SW  +  KY+A + +P          +    G 
Sbjct: 235 RRYFTYENGKQKNYRMKNGSVSVDNRVSWAAVLGKYFAVIGVPDATDYDLLFTEGSEPGL 294

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP------RFEMLIDW 336
                 F +                 + G K    +  Y               E ++D 
Sbjct: 295 PTTSRLFFSRPPLK--SSVSEDVFRFYMGPKISRVLTQYNDPDKNGFGTRDLHLEEVMDQ 352

Query: 337 GWF-YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           G    ++   M  L+ +FY+++ N+G+AI+L T+ VK++ FP+  K Y ST+ M+ +QPK
Sbjct: 353 GRLLGWLEVIMKKLLVFFYSIIPNWGVAIILLTILVKVVLFPITHKSYESTSKMQMLQPK 412

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           + E+++K++ +P ++  + M +LYK   +NP+ GC P+LLQ+P+F A+Y + +   ++R 
Sbjct: 413 MKEIQDKYRDNPNKM-NQEMAELYKREKVNPMGGCLPMLLQMPMFIAMYGLFNKYFDLRG 471

Query: 456 APFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--- 511
           + F  GWI DL++ +    F  F I          + + P+    +M +  KM+  P   
Sbjct: 472 SSFIPGWITDLSSPESVYSFAPFKIPILGWSD---IRLLPMFFVATMILSSKMTQSPSSA 528

Query: 512 --ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
              +    M+   MP+ F F L + P+GL++YW  +NV++I QQ  I K+   +  
Sbjct: 529 GSQNSSMKMMTYMMPIFFFFFLYNAPSGLLVYWIVTNVLTIGQQKAISKIQKRKEE 584


>gi|150005858|ref|YP_001300602.1| putative inner membrane protein translocase component YidC
           [Bacteroides vulgatus ATCC 8482]
 gi|254881961|ref|ZP_05254671.1| inner membrane protein oxaA [Bacteroides sp. 4_3_47FAA]
 gi|294775570|ref|ZP_06741080.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Bacteroides vulgatus PC510]
 gi|319641034|ref|ZP_07995739.1| inner membrane protein oxaA [Bacteroides sp. 3_1_40A]
 gi|166975850|sp|A6L5L6|OXAA_BACV8 RecName: Full=Inner membrane protein oxaA
 gi|149934282|gb|ABR40980.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|254834754|gb|EET15063.1| inner membrane protein oxaA [Bacteroides sp. 4_3_47FAA]
 gi|294450620|gb|EFG19110.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Bacteroides vulgatus PC510]
 gi|317387344|gb|EFV68218.1| inner membrane protein oxaA [Bacteroides sp. 3_1_40A]
          Length = 621

 Score =  229 bits (584), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 106/608 (17%), Positives = 231/608 (37%), Gaps = 48/608 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE----------EMNNERKNIQTVKQPNQVD 50
           M+   N  V  AL   +V  +  +    + E               +K  + + Q     
Sbjct: 1   MD--KNTLVGFALIGAVVIGFSIYNRPSQEEMARAKHYQDSIQAIAQKEAERLAQAATAQ 58

Query: 51  NSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
           +  A + +D  +              L+N  +  +   KG +     L+ Y+     +  
Sbjct: 59  SQNATLHLDSTSMFYGANQGTEQLTTLENNVVKLTFTNKGGRVCAAILKDYN---GQDGK 115

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
            + L    ++       +++     N  +   +  +      +   T  ++L   N   I
Sbjct: 116 PLMLFDEKDS------GMNFAFEGKNENILTEDMYFQPT--NVTDSTVTMRLAANNGGYI 167

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
            F+  +  D + +   +      +      +      R + +     F  ++ + ++   
Sbjct: 168 DFDYKLLPDAYMVNFTIRANGMQNFFPPALNTVNINWRQRARQLEKGFSFEQRYTSLTYK 227

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
                  Y +  K +  +  +   W+   +++++SV I  ++    S         + Y 
Sbjct: 228 PVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTSTPQQEGSGYM 287

Query: 287 AKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYE------KDLAIPRFEMLIDWGWF 339
             ++A+  T   P     T    + G   F T+ +        KDL +     L      
Sbjct: 288 KNYTADMTTFFDPTGKQPTDMQFYFGPNHFKTLLNSNDLSLSQKDLELEDLVYLGWPIIR 347

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +        L  +      + G+ ++L T+ VK+L +P   K Y+S+A M+ ++P I+E+
Sbjct: 348 WVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSAKMRVLKPYINEI 407

Query: 400 REKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
             K+ +       Q+  + LY  + ++P+ GC P+L+Q+PVF A++  +  ++E+R    
Sbjct: 408 NAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFFVPNAIELRQQS- 466

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W  DL+  D  +I      +P       H+ ++ ++ S++  +    +    D GQ  
Sbjct: 467 FLWAPDLSTYD--DIINWGTNIPLLGN---HLSLFCLLFSITNILNTMYTMKQQDMGQQQ 521

Query: 519 I------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           +      +  MPV+F+F  + + +GL  Y+  S +I I+   VI++    E  L+  L +
Sbjct: 522 MPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGIL-TMVILRKTTDEKKLLAMLEA 580

Query: 573 TFSKNYNS 580
              K    
Sbjct: 581 RKEKKSQK 588


>gi|171911028|ref|ZP_02926498.1| 60 kDa inner membrane insertion protein [Verrucomicrobium spinosum
           DSM 4136]
          Length = 618

 Score =  229 bits (584), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 117/506 (23%), Positives = 208/506 (41%), Gaps = 38/506 (7%)

Query: 68  SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127
             ++ELKN S I +    G     + +      +  N      +    T    + +L Y 
Sbjct: 75  EEKIELKNASAIYTFTNVGGGIASVVMLDTKDHIRLNQHGKAAIGALGTAAKAYQDLTYH 134

Query: 128 S---TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184
               T   +     +    L+  +                 +  +   S         + 
Sbjct: 135 VVEKTDKRVVFEALSPEQVLVRKEYSFSEGSGSSDHLVELKVTIKNQSSAKLVRDSYYLY 194

Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244
           T   +S+          +       ++   G        LG                +  
Sbjct: 195 TGAASSLRPDEIEAPAFVWNDAGDASSFATGSFRDGAGFLGFG---------GPVVELQK 245

Query: 245 FHESNSWLGISDKYWASVF-----IPSKETSFHSQFKYLSDGHARYQA---------KFS 290
             +   W G+  +++ ++      IP+K  +      + +D    ++             
Sbjct: 246 NFQHLRWGGVMSRFYTTLISTKTDIPAKTWATRFLIDHSNDEFKDHKKALQDYAIHGGVG 305

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR--FEMLIDWGWFYFIAKPMFM 348
              I + P  S +    ++ GAK F  +   +     P    + ++ +GWF F+++ +  
Sbjct: 306 LPTIELEPNASTSVDYRIYIGAKIFHDLKKIDVAEGQPNRQMQYVMFYGWFTFVSRGLVF 365

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+ +F++L GN+G+AI+L T+ V+ L +P+  +   +   M  + PKI EL+EK K   P
Sbjct: 366 LLRWFHDLTGNWGVAIVLLTITVRSLLWPVQARSNATMKRMGLLAPKIKELQEKHKD-DP 424

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           Q +   M+++Y+ + +NPL GC P+L+QIP+FF  Y V+  + E+R  PF+GWI+DL+  
Sbjct: 425 QKVNTEMMRMYREYGVNPLGGCLPLLVQIPIFFGFYSVLRYAAELRGQPFFGWIQDLSLP 484

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWMPVV 526
           D      L G      P  +        M L+MF+QMK++P P  ADK Q  I   MP +
Sbjct: 485 DTVTTLHLLGYHLPLNPLPLL-------MGLTMFLQMKLTPQPASADKTQQRIFMLMPFM 537

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQ 552
           F+F   SF + L +YW+  N+ SI Q
Sbjct: 538 FLFFCYSFASALALYWTVQNIYSIFQ 563


>gi|315187341|gb|EFU21097.1| membrane protein insertase, YidC/Oxa1 family [Spirochaeta
           thermophila DSM 6578]
          Length = 573

 Score =  229 bits (583), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 121/589 (20%), Positives = 225/589 (38%), Gaps = 43/589 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           ME   N  +A+ LS +++ A     Q  ++    +      + + +     Q  +S    
Sbjct: 1   ME--RNVVIAVILSAVVIIASAVINQMLFMSQVPQVPTPVEEEVLSETPTPQATSSQEGS 58

Query: 57  LIDDR---------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
            +            A   +    V  ++P +    + +G     L L  +         +
Sbjct: 59  SLLSEGLPSGLSVEALLPAEDREVVYRSPLMEVVFSSRGGTVRSLKLLTHR---DGEESV 115

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167
             +  P   +NA+   +         +L            +          +       +
Sbjct: 116 EMVYRPEGGRNAFSLSI------GKGDLLLHVPFQVRRPDERTVEFFQDVRLGGLPPFRV 169

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227
            +R       YLF +   + N+    +  +  G +                         
Sbjct: 170 TKRYRFYPGEYLFDLEVELVNSENSSLPLNFEGVMYTLDTGPQIGPPFAALDRYGEYRKF 229

Query: 228 SL----VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
                   ++                +W+ IS KY+  + IP     +   F  +++G  
Sbjct: 230 FYFLNGKRKEVRLDPGKISELEEGDPTWVAISGKYFTLIAIPLLPQ-YDVAFSTVAEG-D 287

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP------RFEMLIDWG 337
                             IT     + G K    +  Y K             E ++D  
Sbjct: 288 LPLGSTVYLYRPAARSARITDLYRFYVGPKISGELSKYNKKNENSAGLSELHLEKVVDTS 347

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
              ++   +   +  F+ L+ N+G+AI+L T+FVK+L FPL  K Y S + M+ + PK++
Sbjct: 348 LLGWLEGILKFFLQIFFRLIPNYGVAIILLTLFVKILLFPLTHKSYESASKMQQLAPKME 407

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           E+R ++K   PQ + + +  LY+   +NPL GC P+LLQIP+FFA+Y + S   ++R A 
Sbjct: 408 EVRNRYKD-DPQRMNQELALLYQKEGVNPLGGCLPLLLQIPIFFAMYGLFSSHFDLRGAT 466

Query: 458 FW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           F  GWI DL+  +    F      P  L G+  + + P+I+ ++  I  K++   +   Q
Sbjct: 467 FIPGWIDDLSVPESVFHFDT----PLPLLGWTDIRLLPLILVVTQIISTKITQGASSSSQ 522

Query: 517 -AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
             + +  +PVVF+F L + PAGL++YW   N+ +I QQ  I ++   + 
Sbjct: 523 NQLFMYVLPVVFLFILYNAPAGLLVYWVAMNIFTIAQQLYINRVMKRKT 571


>gi|91202840|emb|CAJ72479.1| similar to inner membrane protein YidC [Candidatus Kuenenia
           stuttgartiensis]
          Length = 563

 Score =  229 bits (583), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 127/577 (22%), Positives = 241/577 (41%), Gaps = 47/577 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVY---PRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           M+      +A+ +  +I+  +    +    P+ E++  E  + +  +   + +       
Sbjct: 1   MD--RKSLIALIICGVIMLLYYPIILPLLSPKTEKVTQEELSAEKRRLETKNEIRTVTPA 58

Query: 58  IDDRAQALSM----SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
           +    + L         V ++N  +       GA    + L+ +    S ++  + L+  
Sbjct: 59  LLPSQETLREMDIHEEEVVIENECIRTVWINDGAALKSVKLKDFKSQDSKDT--LELIKD 116

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
           ++T+    A       A+        T  +       T               L +    
Sbjct: 117 ADTEYRPLAISYIYQKADFQRQRYRITDRSKGRISFSTSLES--------GLNLIKTVSI 168

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
            D  Y   +   + NN+  +I  +    I                G + +      ++  
Sbjct: 169 PDGKYQVDMEIVLENNTDAEISLA-YDIIASSMITHEGVISTDIAGLVGIDMGNHKIKLV 227

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET----------SFHSQFKYLSDGHA 283
            +  +     N      W G ++KY+A+V  P+                           
Sbjct: 228 STAPKGFPAKNESRGIVWAGSTNKYFATVLKPASSEWVASVHLQAFDMQGMPSEEKAEQG 287

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
            +        I I P  S+      F G K+   +  Y         + +I +GW   I+
Sbjct: 288 DFMVSLQTGRIHIAPHTSVRHGYLYFVGPKKEEVLGQYGT------MDAIISYGWLNVIS 341

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           K +   ++  +N++ N+GI+I++ T+ +K L FPL +K  VS   M+ +QP I++L+EK+
Sbjct: 342 KLLLGFLNAVHNVIPNYGISIIVLTIIIKALLFPLTRKSQVSMFRMQQLQPLINQLKEKY 401

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
           K +  Q + +  + L+K + +NP++GC P++LQ+PVFFA+++ + +S EMR APF  WI 
Sbjct: 402 KNNK-QKIGQEQVLLFKKYGVNPMSGCLPMILQLPVFFALFRTLQLSFEMRQAPFVFWIN 460

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKG---QAM 518
           DL+  D   +  L   +PF       + I PIIM+ + F+QMK++P  P  D     Q  
Sbjct: 461 DLSMPD--TLMYLPFTIPFLGNT---LNILPIIMTGASFVQMKLTPKSPATDPQAQAQQK 515

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           ++++MP++F F L   P+GL +YW+ S + SIV+   
Sbjct: 516 MMSFMPIMFAFILYKMPSGLTLYWTTSTIFSIVESLF 552


>gi|149193808|ref|ZP_01870906.1| putative inner membrane protein translocase component YidC
           [Caminibacter mediatlanticus TB-2]
 gi|149135761|gb|EDM24239.1| putative inner membrane protein translocase component YidC
           [Caminibacter mediatlanticus TB-2]
          Length = 511

 Score =  229 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 121/567 (21%), Positives = 237/567 (41%), Gaps = 70/567 (12%)

Query: 1   MERN--WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           ME N      +A  +S +  +A+  F + P+I++   E    +   Q N+      + L 
Sbjct: 1   MENNNLRRIILATVISFVFFFAYDYFVLQPQIKQGVKENNITKVTTQENKKVKKERSNLK 60

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
            D           +++  +    I+  G +     L+    +      +  +       +
Sbjct: 61  IDVVA--------KIEAKNYEVKIDSLG-RISSFILKQNKFNTEKGQHLELI------PS 105

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEH 177
                L+     N +     NT   +    I     P K++       ++ ++ ++   +
Sbjct: 106 KLPKPLEIRFEDNELNKKAFNTKVEVDKKLIKLNNKPQKIIITQNLGKVILKKIVTFYPN 165

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
             + +  T+  N               ++P  A +   +    I        + +     
Sbjct: 166 GRYDVEVTLNKNVN-------YFISPGYRPNVAIDQLTIHGALIKKADGTLDIIKD---- 214

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
              + +    +   +   D+Y+ ++F      +                         + 
Sbjct: 215 -GDATAKTINNAIIVAGFDRYYTTLFFSKNPLNAVV-------------IPDEEKNPVLF 260

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
              +       + G K    +   +     P    ++ +G   F A+ +F+L+ + Y + 
Sbjct: 261 IKDNKDLKLIGYIGPKYVDVLKSID-----PELVDVVQYGVGTFFARNLFLLLDFLYKIS 315

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+GIAI+L  + V+++ FPL  K  VS   +K + PK+ E++E++ +  PQ LQ  M++
Sbjct: 316 HNWGIAIILLVILVRIVLFPLTFKGMVSMYKLKELAPKMKEIQERY-KKDPQKLQMHMMK 374

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK H  NPL GC P+LLQIP+F+ IYK++  S+E++ A  + WIKDL+  DP       
Sbjct: 375 LYKEHGANPLGGCLPLLLQIPIFYGIYKLLLYSIELKGA-HFLWIKDLSEMDPYF----- 428

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
                         I P++M ++M+I  K++P    D  Q  I  ++PVVF   +++FPA
Sbjct: 429 --------------ILPVLMGITMYIHQKLTPTNFQDPMQEKIFKFLPVVFTIMMATFPA 474

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           GL++YW+ +N++SI+QQ +I K+  ++
Sbjct: 475 GLVLYWTVNNILSILQQVLINKIMESK 501


>gi|224023372|ref|ZP_03641738.1| hypothetical protein BACCOPRO_00065 [Bacteroides coprophilus DSM
           18228]
 gi|224016594|gb|EEF74606.1| hypothetical protein BACCOPRO_00065 [Bacteroides coprophilus DSM
           18228]
          Length = 617

 Score =  229 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 104/598 (17%), Positives = 218/598 (36%), Gaps = 39/598 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V   L   ++  +   Y  P  EE    +    +++Q        A    + 
Sbjct: 1   MD--KNTLVGFVLIGAVIVGFGI-YNRPSQEEKARAQHYQDSIQQLAIQKEQEALKAQEA 57

Query: 61  RAQAL-------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
             + +                    L+N  L  + + KG +     L+ Y   +      
Sbjct: 58  AEKTIRLDSTSMFYQATQGTEQLTTLENDLLQLTFSNKGGRVKKAMLKEY---MDQQKQP 114

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167
           + L    +      A L++     N  L + N  +  +S    +    ++L   N  ++ 
Sbjct: 115 LVLFDGED------ASLNFGFEGKNENLLSENLYFETVSKTDTSV--TMRLNASNGGHLD 166

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227
           F   + L+ + +   +      +             + + +     +  ++ + ++    
Sbjct: 167 FVYKLLLNSYMVDFSIQASGMQNFFSPSTKTVSVDWKQRARQMEKGYTFEQRYTSLTYKP 226

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
                 Y    K       E   W+   ++Y++ VFI  +     +    +    + Y  
Sbjct: 227 VDDSFDYLSETKDEKETILEVLDWVAFKNQYFSCVFIAEQNFEKATLESKMEQKGSGYMK 286

Query: 288 KFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHH------YEKDLAIPRFEMLIDWGWFY 340
            + A+  T   P  +  +    + G   F T+         +KDL +     L       
Sbjct: 287 NYQADMQTAFDPTGAKPSNFQFYFGPNHFKTLLASNDLSFKDKDLELEDLVYLGWPIIRL 346

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   L  +  +   + G+ I+L T+ VK+L  P   K ++S+A M+ ++P +D++ 
Sbjct: 347 INRWFTINLFDWLSSWGLSMGMVILLMTIIVKILVLPTTWKSFISSAKMRALKPYVDKIN 406

Query: 401 EKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
            K+ +       Q+  + LY  + ++P+ GC P+LLQ PVF A++  +  ++E+R    +
Sbjct: 407 AKYPKQEDALKKQQETMALYSQYGVSPMGGCLPMLLQTPVFMALFFFVPNAIELRQQS-F 465

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            W  DL++ D    ++    L         +      +I  + M  Q  M   P      
Sbjct: 466 LWASDLSSYDDLISWSTSIPLLGNHLSLFCLLFSATTVINQIVMMKQQDMGNNPQMAAMK 525

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
            ++  MP++F F  + + +GL  Y+  S +I I+    IM+    E  L+ +L +   
Sbjct: 526 WMMYIMPLMFFFIFNEYASGLSYYYFISGLIGIL-TMWIMRRMTDEKKLLAQLEANKK 582


>gi|24212878|ref|NP_710359.1| preprotein translocase subunit YidC [Leptospira interrogans serovar
           Lai str. 56601]
 gi|38502900|sp|P97041|OXAA_LEPIN RecName: Full=Inner membrane protein oxaA
 gi|24193541|gb|AAN47377.1| preprotein translocase subunit YidC [Leptospira interrogans serovar
           Lai str. 56601]
          Length = 627

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 104/621 (16%), Positives = 222/621 (35%), Gaps = 71/621 (11%)

Query: 1   MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA--VL 57
           ME      F+A+ LS+ I      F+      + N E K  Q+ K          +    
Sbjct: 1   MEDRQTRLFLALILSMGIWMGVNYFFFPNTSTKKNTETKQTQSDKTSENTKQQITSGKTK 60

Query: 58  IDDRAQALSMSPRVE--------LKNPSLIGSINLKGAQFDDLNLRGYH----------- 98
             + A  +    ++         +   S I   +  G +     ++ +            
Sbjct: 61  ESNSADPVVQKEKITPFDTKKSFIVTDSYIVEFSSLGGKISKFYMKDFTGPNGELIQVAR 120

Query: 99  -----LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELP---------NSNTVWNL 144
                + V   S     LS     +  F++     + +              N +  ++ 
Sbjct: 121 KNPETVVVDGKSYQAVELSRDKGFDFNFSDSLVEISDSPWNYIQFSLTEDKINHSISFSA 180

Query: 145 ISGKILTPTTPIKLVFKNANNILFERTI-SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM 203
           +S             + + N      +I +  +  L                  P  +  
Sbjct: 181 VSPDRSYQLKKEFRFYPSENYFKLSISIINFSKEKLSFASQKNVRYLRTFGSLGPYPKDR 240

Query: 204 RHKPQTATNTFGVQEGFIAVLGDKS--------------LVEQKYSDIEKSSISNFHESN 249
               +   N F       +                          +D   S  ++     
Sbjct: 241 PLSDRDTANFFRFYYLGGSFQDTLDGSSSVGFWSSVGNFFTGNSGTDESFSIKTDKESGV 300

Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309
            + G   +Y+ +V  P                 +     +  + I + PG++       +
Sbjct: 301 DFAGTGSRYFIAVADPLDHKPHGIVLDNRPKNESGAVLVY--DNILLNPGENYNLDFASY 358

Query: 310 AGAKEFPTIHHYEKDLAIPR------------FEMLIDWGWFYFIAKPMFMLMSYFYNL- 356
            G +E   +     +L   +                 + G        +  ++   Y   
Sbjct: 359 IGIRESEGMAFKNPELDPSQSKNSPFVGLSSDLNKSFNQGITTPFRNGIIWILKQIYRFT 418

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           + N+G +I++  +  KL+F+PL +KQ  S   M+ + P++  + EKF    P++ Q+  +
Sbjct: 419 IPNYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFAN-DPKMRQQKTM 477

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LYK +N+NP+ GC P+++QIP+F A+Y   S ++++ ++P + W+KDL+  D   +   
Sbjct: 478 ELYKKNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSP-FLWVKDLSEPD---VIWT 533

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536
              +P++    + + +  ++M  +   Q +M+    D  Q M++  MPV+ ++   + P+
Sbjct: 534 SPAIPYFTQTGIGLNLLALLMVGTQVFQTRMTSVSMDPNQKMLMYVMPVMMLYIFWNMPS 593

Query: 537 GLIIYWSWSNVISIVQQAVIM 557
           G+ +YW++ NV+SI QQ +  
Sbjct: 594 GVTLYWTFQNVLSIGQQWITN 614


>gi|45656063|ref|YP_000149.1| hypothetical protein LIC10157 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|73921529|sp|Q72VY8|OXAA_LEPIC RecName: Full=Inner membrane protein oxaA
 gi|1902825|dbj|BAA19448.1| ORF2 [Leptospira interrogans]
 gi|2780768|dbj|BAA24371.1| ORF2; putative [Leptospira interrogans]
 gi|45599296|gb|AAS68786.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 627

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 103/621 (16%), Positives = 221/621 (35%), Gaps = 71/621 (11%)

Query: 1   MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA--VL 57
           ME      F+A+ LS+ I      F+      + N E K  Q+ K          +    
Sbjct: 1   MEDRQTRLFLALILSMGIWMGVNYFFFPNTSTKKNTETKQTQSDKTSENTKQQITSGKTK 60

Query: 58  IDDRAQALSMSPRVE--------LKNPSLIGSINLKGAQFDDLNLRGYH----------- 98
             + A  +    ++         +   S I   +  G +     ++ +            
Sbjct: 61  ESNSADPVVQKEKITPFDTKKSFIVTDSYIVEFSSLGGKISKFYMKDFTGPNGELIQVAR 120

Query: 99  -----LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELP---------NSNTVWNL 144
                + V   S     LS     +  F++     + +              N +  ++ 
Sbjct: 121 KNPETVVVDGKSYQAVELSRDKGFDFNFSDSLVEISDSPWNYIQFSLTEDKINHSISFSA 180

Query: 145 ISGKILTPTTPIKLVFKNANNILFERTI-SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM 203
           +S             + + N      +I +  +  L                  P  +  
Sbjct: 181 VSPDRSYQLKKEFRFYPSENYFKLSISIINFSKEKLSFASQKNVRYLRTFGSLGPYPKDR 240

Query: 204 RHKPQTATNTFGVQEGFIAVLGDKS--------------LVEQKYSDIEKSSISNFHESN 249
               +   N F       +                          +D   S  ++     
Sbjct: 241 PLSDRDTANFFRFYYLGGSFQDTLDGSSSVGFWSSVGNFFTGNSGTDESFSIKTDKESGV 300

Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309
            + G   +Y+ +V  P                 +     +  + I + PG++       +
Sbjct: 301 DFAGTGSRYFIAVADPLDHKPHGIVLDNRPKNESGAVLVY--DNILLNPGENYNLDFASY 358

Query: 310 AGAKEFPTIHHYEKDLAIPR------------FEMLIDWGWFYFIAKPMFMLMSYFYNL- 356
            G +E   +     +    +                 + G        +  ++   Y   
Sbjct: 359 IGIRESEGMAFKNPEFDPSQSKNSPFVGLSSDLNKSFNQGITTPFRNGIIWILKQIYRFT 418

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           + N+G +I++  +  KL+F+PL +KQ  S   M+ + P++  + EKF    P++ Q+  +
Sbjct: 419 IPNYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFAN-DPKMRQQKTM 477

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LYK +N+NP+ GC P+++QIP+F A+Y   S ++++ ++P + W+KDL+  D   +   
Sbjct: 478 ELYKKNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSP-FLWVKDLSEPD---VIWT 533

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536
              +P++    + + +  ++M  +   Q +M+    D  Q M++  MPV+ ++   + P+
Sbjct: 534 SPAIPYFTQTGIGLNLLALLMVGTQVFQTRMTSVSMDPNQKMLMYVMPVMMLYIFWNMPS 593

Query: 537 GLIIYWSWSNVISIVQQAVIM 557
           G+ +YW++ NV+SI QQ +  
Sbjct: 594 GVTLYWTFQNVLSIGQQWITN 614


>gi|182413290|ref|YP_001818356.1| 60 kDa inner membrane insertion protein [Opitutus terrae PB90-1]
 gi|177840504|gb|ACB74756.1| 60 kDa inner membrane insertion protein [Opitutus terrae PB90-1]
          Length = 604

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 103/565 (18%), Positives = 211/565 (37%), Gaps = 51/565 (9%)

Query: 28  PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL-----SMSPRVELKNPSLIGSI 82
                ++  +         N +     +  +   A A        +  V L+N  +   +
Sbjct: 33  QPTPTISTPQTAATGTAPANALPTGTPSAPVPSTAFASVAENDGSATTVTLQNDFIAAHV 92

Query: 83  NLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVW 142
              G    D+ L+ Y  +     P V     +   +   A +D+            +   
Sbjct: 93  TDFGGALHDVALKKYPAERDRPEPFV---FNALHADPMLALVDFPGLDRQTRFELVSHTP 149

Query: 143 NLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIR-FSPRGR 201
                + +                + +      + Y+ +   T  N S   +        
Sbjct: 150 TSAVYRAVLNGQVEVTRH----YSVLQAGDKSGDPYVVRHETTFRNLSDQTVTLPRVALS 205

Query: 202 IMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD----------IEKSSISNFHESNSW 251
           +    P  A +         +   D++   +   +           E           +W
Sbjct: 206 LGTAAPTDANDPGIRLTTGYSNGDDQNFFARSKLEGGNGFFGIGASEPKPQILTGGPIAW 265

Query: 252 LGISDKYWASVFIPSKETSFHSQFKYL--------SDGHARYQAKFSANEITILPGKSIT 303
             +S++++AS+  P +  S     +          +       +    +   +       
Sbjct: 266 ACVSNQFFASILTPDQPGSGLITRRVKLLPMLPDENRNAYGITSAAQFDLTPLAANAETK 325

Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV----GN 359
                + G KE+  + +   D+     + ++ +G+F F ++ +  LM++ +         
Sbjct: 326 LGADFYVGPKEYRRLANG--DVFKKDQDKVMQFGFFKFFSQILLTLMTWVHGWFPSAAWA 383

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +G A+++TT+ +K++F P       S   M  IQP++  +REKFK +P Q LQ A ++L+
Sbjct: 384 WGWAVVITTLILKIIFVPFTLAASRSAKRMAKIQPEMQAVREKFKDNP-QKLQAATMELF 442

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           K H +NP+ GC+PIL+ IP F   ++++  + E+R  P + W  DL+A D       F  
Sbjct: 443 KKHKVNPMGGCFPILITIPFFIGFFQMLQSAAELRFQP-FLWAYDLSAPDTVLHIGPF-- 499

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGL 538
                     + I P++M  ++ IQM+++P PA D  Q  ++ +MP +      +F   L
Sbjct: 500 ---------PLNIMPLLMGATIVIQMRLTPSPAVDNMQVKMMKFMPYIMTMFCYTFSCAL 550

Query: 539 IIYWSWSNVISIVQQAVIMKMHGAE 563
            +Y + + + +I QQ VI +M    
Sbjct: 551 ALYSTVNGIFTIGQQLVINRMKDNP 575


>gi|319789453|ref|YP_004151086.1| membrane protein insertase, YidC/Oxa1 family [Thermovibrio
           ammonificans HB-1]
 gi|317113955|gb|ADU96445.1| membrane protein insertase, YidC/Oxa1 family [Thermovibrio
           ammonificans HB-1]
          Length = 490

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 124/568 (21%), Positives = 234/568 (41%), Gaps = 84/568 (14%)

Query: 1   MERNW--NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           ME         ++ L+++IV  +Q F+     ++   +  + +T               +
Sbjct: 1   MEEGKFGTLIQSLILALLIVIGFQFFFHRGEEKKELQKPTSAKTYS-------------L 47

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP-SNTK 117
            D   +  +   V ++ P      +    +   L ++ Y+           L+SP S   
Sbjct: 48  QDVPSSKRLGELVTVETPLYTAQFSTVNGKLVKLTVKKYNA---------QLVSPISKEL 98

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
             Y       +   +  L + NT  +    K+      +    K  +  +F++  +    
Sbjct: 99  GVYPLTTVAANPELSKVLVDLNTTPSAKELKVTKAPAKLTFTGKLPDGRVFKKVFTFYP- 157

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
                     N+     +   +G  ++                +  +G     ++K   +
Sbjct: 158 ----------NSYRIDFKAQLKGARLQTIVGPDIKVNEAHTSRMGHIGPVIETQEKVIRL 207

Query: 238 EKSSISNFHESNS--WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           +   I  F   N+  W G  DKY+       K+T F +  + +       +    +    
Sbjct: 208 KPEEIKGFMSFNNVLWAGEEDKYFLMAV---KDTDFTATVEKVGPKDTLVRNFVGSGIF- 263

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
                        + G KE   +            +  ID+G F F+AKP+     + + 
Sbjct: 264 -------------YGGPKELHQLEPL-------GMDSAIDFGIFGFLAKPLLKFFLFLHK 303

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
            V N+G+ I+L  + +K+L  PLA K YVS   M+ + PK++EL++++    PQ LQ+  
Sbjct: 304 FVPNWGLDIILFVLIIKILLHPLAHKSYVSMKKMQELAPKLEELKKRYGN-DPQKLQEET 362

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LY+   +NP +GC P+LLQIP+FFA+Y++   ++E++ A  + WI DL+  D T    
Sbjct: 363 MKLYQEMGVNPASGCLPMLLQIPIFFALYEIFLNAVELKGAS-FLWIPDLSQPDHTY--- 418

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
                           I P++M LSM +Q  ++P   +K Q  I   M V+F    ++FP
Sbjct: 419 ----------------ILPVLMGLSMIVQQLLTPT-TNKQQQKIFILMAVIFTVMFATFP 461

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           AGL++YW  +NVI+ +Q  +I+K+   +
Sbjct: 462 AGLVLYWFTNNVITAIQNFIILKILEKK 489


>gi|297171723|gb|ADI22715.1| preprotein translocase subunit YidC [uncultured verrucomicrobium
           HF0500_27H16]
          Length = 653

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 129/664 (19%), Positives = 249/664 (37%), Gaps = 97/664 (14%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ---TVKQPNQVDNSYAAVL 57
           M++N      + L+       Q      +      E  +     +      ++    +  
Sbjct: 1   MDKNK-LLGILFLAAAFWLMTQMPKPGNKYTAPGPEATSTTGGMSATGSATINQPKPSAP 59

Query: 58  IDDRAQALSMSPRVELKN------PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-- 109
                +A     RV             + +    G    ++             P +   
Sbjct: 60  TTQSPKAQPAVERVPETTYQLGVEGQFVATFTSHGGAIKEVRFLSKEDRFRKFDPTIRAK 119

Query: 110 -----------LLSPSNTKNA-------------YFAELDYVSTANNIELPNSNTVWNLI 145
                      LL+ +  +N                  L +++ A        +    L 
Sbjct: 120 LNLEEVRALLKLLNEAAAENDTNTTGKLEKQARKLKVPLQWIAAAKTQPKGAFDENAMLQ 179

Query: 146 SGKIL----------------------------TPTTPIKLVFKNANNILFERTISLDEH 177
           S                                     I    ++ + I+  R       
Sbjct: 180 SDNNYILNEGQKRPILELLFHGVDSDLVFQKTDETENSITFRAQHGDLIITRRYELAKGT 239

Query: 178 YLFKIVDTVTNNSIDQIR-FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV------ 230
           +  +   T+ N  I +I   S     +     T ++T    +      G +         
Sbjct: 240 FKIRHTTTLQNTGIQKIDLGSQVFYGLGTSLPTVSDTRKEFQNVGYFSGQRGWTGRRKPP 299

Query: 231 --EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS--------QFKYLSD 280
             + +    +  S+        W+ + ++++A    P K T+              +  +
Sbjct: 300 IFKLQKMQKQGGSMMENAGGIHWVAVRNQFFAVSLAPDKPTTGVVKGKVFDLGTLDHRGE 359

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
                  +F  N   + PG+S+T    L+AG KE   + +  K   +   ++++ +G+F 
Sbjct: 360 SEYGVHGQFGLNTDMLTPGQSLTHEFNLYAGPKELKRLSNLSKA-GMKHQDLVMQFGFFG 418

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
             +K + MLM   +  V N+G AI++ T+ +KLLF+PL  K   S   M+ IQP + E++
Sbjct: 419 LFSKLLLMLMQMLHGFVHNWGWAIIIMTILIKLLFWPLTAKSASSMKRMQTIQPLMKEIQ 478

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
            K+K   PQ +Q+ + +L++ + +NP AGC PIL+Q+P+F  ++ ++  + E+R A  + 
Sbjct: 479 AKYKD-KPQKMQQEVAKLFRENKVNPAAGCLPILIQMPIFLGLFFMLRSAAELRFA-EFF 536

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-----ADKG 515
           W+ DL+  +   +F     +P     F    + PI+M ++MF QM+M+P P       K 
Sbjct: 537 WVSDLSQPE--RMFHWGVQIPILGEYF---NLLPILMGITMFYQMRMTPIPPGADDMQKM 591

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
           QA +  ++P +F+F L  F +GL++YW+  N++SIVQQ +  K    E  +   L  +  
Sbjct: 592 QAKMFRFLPFIFLFMLYGFSSGLVLYWTVQNILSIVQQTITNKRKDTEPVV---LPGSSK 648

Query: 576 KNYN 579
           K   
Sbjct: 649 KKNK 652


>gi|223937849|ref|ZP_03629749.1| 60 kDa inner membrane insertion protein [bacterium Ellin514]
 gi|223893455|gb|EEF59916.1| 60 kDa inner membrane insertion protein [bacterium Ellin514]
          Length = 604

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 104/601 (17%), Positives = 224/601 (37%), Gaps = 67/601 (11%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYV---YPRIEEMNNERKNIQTVKQPNQVD------- 50
           M+        + +   +++ W         P+    +    +  +      +        
Sbjct: 1   MD--RKSISILIVCGALLFLWPVLVNKILPPKPAPPHTNLVSSASSTNQTALGTNQAAIA 58

Query: 51  ------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                  +   V              + + N + + +   +G    ++ L  Y   VS+ 
Sbjct: 59  PAQPAFEAGTNVASQFAVNTNQPEETLVVTNDNAVYTFTSRGGGLKEVELLHYPETVSAL 118

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
                  +   T N   A        N+    +     + + G +              N
Sbjct: 119 RRRAQRTNQFATLNTPAAPPVLSILGNDSLTGDGVFKLSQVPGGVHAEK-------VLTN 171

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV- 223
            +   +   L  +YL      + N S   ++ SP+  ++           G   G +   
Sbjct: 172 GLKVVKEFRLGTNYLMSASVRMENQSRQPLQLSPQEVVLGTATPLGIQDNGQVVGMLWYN 231

Query: 224 -----------LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASV---------- 262
                          +     +    ++          W+ + ++++             
Sbjct: 232 SNKVASVGPSFFNTNTTKLFFFPRTPETEYRAGSNDVVWVALKNQFFTLATMPQIPAPSV 291

Query: 263 -----FIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317
                ++P       S             A       T+ PG  +     +F G KE+ T
Sbjct: 292 VAHLTYLPPPSREEVSSTPKAVAQPTGVTAALEYPGQTLAPGGFVERNYDIFTGPKEYKT 351

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFF 376
           +            + ++++G F  I+K + + M++ ++ L  ++G+ I+L TV +K++F+
Sbjct: 352 LARIAARFN-NDIDKVMEFGLFSPISKMLLLGMNWLHHRLSVSYGLTIILITVLIKIVFW 410

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436
           PL      S   M+ +QP+I  ++EK+K   PQ + +  ++ Y+ + +NPL GC P LLQ
Sbjct: 411 PLTAFSTKSMKRMQALQPQIKAIQEKYKD-EPQKVSQKTMEFYRKNKVNPLGGCLPALLQ 469

Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           IPVFF  + ++  ++E+R A  + W+ DL+  D   I   F            +   P++
Sbjct: 470 IPVFFGFFAMMRGAIELRGA-HFLWMGDLSQPDTIFIIPGFNFP---------INPMPLL 519

Query: 497 MSLSMFIQMKMSPPP--ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           M ++M  Q+ ++PP    D  Q  ++ +MP++ +  + S P+GL +Y++  N+++I+Q  
Sbjct: 520 MGVTMLWQISLAPPSPGMDPAQQKMMKFMPLMILLFVYSQPSGLALYYTVQNLLTILQTK 579

Query: 555 V 555
           +
Sbjct: 580 L 580


>gi|99034074|ref|ZP_01314196.1| hypothetical protein Wendoof_01001014 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 341

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 137/344 (39%), Positives = 212/344 (61%), Gaps = 8/344 (2%)

Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFH 272
           + +    +    D  L E  Y DI K  +     S  +W G +DKYW +  IP K    +
Sbjct: 1   YWISHEGVLGAFDNKLEEWTYKDISKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKIN 60

Query: 273 SQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
              K+ + +   ++Q  F     +ILPG S++  N+ FAGAK+   +  Y+  L IP F+
Sbjct: 61  VSIKHTNVNNTDKFQVDFVKPYKSILPGASVSNVNYFFAGAKKLNLLDSYKDTLNIPLFD 120

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +D+G  YFI KP+F+L+ YF  ++ NFG+AI+L T+ +KLL   L  + Y+S   +K+
Sbjct: 121 KAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLSLFNRSYISMFKVKS 180

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +QP++  ++E +K    +   K  I L+K +N+NP++  +P+L+QIPVFFA+YKV+ +++
Sbjct: 181 LQPELTRIKELYKNDSLK-QHKETIALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTI 239

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS--- 508
           EMRHAPF+ WIKDL+A DPTNIFTLFG+  +  P  + +GI PII   +M IQ K+S   
Sbjct: 240 EMRHAPFFLWIKDLSAPDPTNIFTLFGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKD 297

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
               D  Q  ++ ++P + VF  SSFPAGL+IYW +SN+I+++Q
Sbjct: 298 QTSKDDIQVNVMKFLPYISVFIFSSFPAGLVIYWIFSNIITLIQ 341


>gi|42525232|ref|NP_970612.1| 60 KD inner-membrane protein [Bdellovibrio bacteriovorus HD100]
 gi|39577443|emb|CAE81266.1| 60 KD inner-membrane protein [Bdellovibrio bacteriovorus HD100]
          Length = 539

 Score =  228 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 118/578 (20%), Positives = 217/578 (37%), Gaps = 59/578 (10%)

Query: 2   ERNWN---------YFVAIALSVIIVYAWQNF-------YVYPRIEEMNNERKNIQTVKQ 45
            +  N           +A+A   I+ Y W  +       Y  P+ +   + +        
Sbjct: 1   MQQKNNNPSFFDPKTLIAVAAVAIVYYGWNTYLGKKYPDYNKPKTQTEQSSKPATAATTS 60

Query: 46  PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
                 +       +  +  + +     +N  +   +   G       +  Y        
Sbjct: 61  ETPAATANTVDTKSEIMETPTTAKEFHFENDKVSFVMTSFGMGLKGYTINNY---QDKEK 117

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             + L   SNT   +       S     ++        + + ++       +L F +  +
Sbjct: 118 NNIKL-GVSNTDGLFEMRWAGDSKPLTFDVAEQAPGHYVGTAQVGETVIKRELKFNSETS 176

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
                    +    FK   ++          S       ++           + F     
Sbjct: 177 SFTNTISVTNPTEDFKKGFSLLIPESIHTHASTSFLFPSYE----------HQDFFVTHN 226

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
                   +       +     + S + +S +Y+A+  +   E     +     +     
Sbjct: 227 GGKHDTVNF-SGATEDVVKDFPATSLVSVSSQYFAAAILDKSEIMPEVKLNAQINAKTAM 285

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
                           +T +   +AG K    +   +     P    LID+G+F FIA+P
Sbjct: 286 AELVYKPASVKP---EMTFSEVFYAGPKSIDALKAVD-----PEMASLIDFGFFGFIARP 337

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +  +M   +++VGN+G AI++ T+ V+L   P     + S   M+ +QP I  LREK+ +
Sbjct: 338 LLYVMKAAHSVVGNWGFAIIILTLLVRLCVLPFNIMSFKSMKAMQKVQPIIQGLREKY-K 396

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
             P  L + M+ + K +  NPL GC P+LLQIPVFFA+Y+VI  S+E+ ++PF  WI DL
Sbjct: 397 EDPMRLNQEMMAVMKQNGANPLGGCLPMLLQIPVFFALYRVIGSSIELYNSPFILWITDL 456

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525
           ++ D                      + P+ M++ M+IQ K++P   D  QA I+ ++PV
Sbjct: 457 SSHDKFY-------------------VLPVSMAVFMYIQQKITPSTMDPTQAKIMAFLPV 497

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           VF   +   PAGL +Y   S +  I+QQ +IM+    +
Sbjct: 498 VFSLFMLQLPAGLTLYMVVSTLFGIIQQWLIMREPKTK 535


>gi|298208263|ref|YP_003716442.1| putative inner membrane protein translocase component YidC
           [Croceibacter atlanticus HTCC2559]
 gi|83848184|gb|EAP86054.1| putative inner membrane protein translocase component YidC
           [Croceibacter atlanticus HTCC2559]
          Length = 622

 Score =  228 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 117/624 (18%), Positives = 241/624 (38%), Gaps = 70/624 (11%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME      N  +   L   I+  W  +   P  EE+  E+   + V++ N+ +       
Sbjct: 1   MENKKFDLNSLIGFILIGGILI-WMLYRNAPTEEEL-QEKATTEQVEKANETNEVATPTT 58

Query: 58  IDDRAQALSMSPRV------------------------ELKNPSLIGSINLKGAQFDDLN 93
           +D    A + +  +                          +N  L   +  KG Q  +  
Sbjct: 59  VDSTQVATTETDSIKQARANAQLGSFGYSNQYDNGTVTTFENDVLFLKVANKGGQIVEAK 118

Query: 94  LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153
           ++ +      +S  V L+  +N       +     T N   L    T+      +     
Sbjct: 119 MKNFKT---YDSIPVHLIKDNNASFNINFKTSDNRTLNTENLAFEPTLSKSGDNQ----V 171

Query: 154 TPIKLVFKNANNILFERTISLDEHY-LFKIVDTV-TNNSIDQIRFSPRGRIMRHKPQTAT 211
             +KL   N+  + +   +   E+   F I      N            ++  ++   + 
Sbjct: 172 LSMKLKVSNSEYLEYRYELKPGEYMLDFSINSKGLENVLNTSEAAVLNWKLKGYRHAKSI 231

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
           +        I    D         D       +      ++     ++ S+ +       
Sbjct: 232 SYENRYTEAIYEYEDGKDDYLGQQDFTDDEEEDVT----YVAFKQHFFTSILLTDTPFKT 287

Query: 272 HSQFKYL----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327
                       D    Y  +F+A       G  I      + G  ++  ++ Y+++   
Sbjct: 288 GKFTSKNLVEDEDIDTVYTKEFTAQFPLETKGGEIDYNMNWYYGPSDYKILNDYDRN--- 344

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNL----VGNFGIAIMLTTVFVKLLFFPLAKKQY 383
              + +I  GW  F     ++ + +F  +    V ++G+AI++ T+ V+++  P+  K Y
Sbjct: 345 --LDEVIPLGWGIFGWINRYVFIPFFAFITSFGVVSYGVAIIIMTIVVRIVLSPVTYKSY 402

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
           +S A MK ++P+I+EL EK+K +P +  Q+  ++LY     +P++GC P L+Q+PVF+A+
Sbjct: 403 LSQAKMKVLKPEINELNEKYKDNPMKK-QQETMKLYSKAGASPMSGCLPALMQLPVFYAL 461

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           ++    + ++R    + W  DL++ D   I  L   +PFY     HV ++PI+ S+++F 
Sbjct: 462 FQFFPSAFQLRQKS-FLWADDLSSYD--TIAELPFSIPFYG---DHVSLFPILASVAIFF 515

Query: 504 --------QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
                    M+ +  P       I+   P++ +F  +++ +GL +Y+  SN+I+I    V
Sbjct: 516 YMTMTTGQTMQQNSQPGMPNMKFIMYLSPLLMLFFFNNYASGLSLYYFISNLITIGIMLV 575

Query: 556 IMKMHGAEIGLIDRLRSTFSKNYN 579
           I  +   E  +  ++ +   K   
Sbjct: 576 IKNVIIDEDKIHAKIEANKKKPKK 599


>gi|225012688|ref|ZP_03703123.1| 60 kDa inner membrane insertion protein [Flavobacteria bacterium
           MS024-2A]
 gi|225003221|gb|EEG41196.1| 60 kDa inner membrane insertion protein [Flavobacteria bacterium
           MS024-2A]
          Length = 608

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 113/604 (18%), Positives = 231/604 (38%), Gaps = 45/604 (7%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ--TVKQPNQVDNSYAA 55
           ME        F+   L   ++  W  +   P  E    +    +  TV+   +V     +
Sbjct: 1   MEEKKFDPYQFIGFILI-AVILTWMLYRNGPAEEASTAKATTEEGATVQSTPEVVQVSDS 59

Query: 56  VLIDDRAQA---------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
           +L   + +A            +  V++   +    +  KG Q     L  +     +   
Sbjct: 60  ILQQQKVEAFGDLGTLFVPKPTENVKITTDNFSVEVQSKGGQIVLFQLDEFENYEDA--- 116

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
            + L+  SNT      + + V T  +  L N+  ++   +         + +    + + 
Sbjct: 117 PIRLIDESNT------DFNIVMTTLDGRLMNTREMYFSPTLTDKGDAYHLVMKASLSPSQ 170

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
                    +      V   T      +  +   ++         +     E        
Sbjct: 171 YVAFEYHFPKTGYLHTVALKTVGMQRLLNSASPPQLDWKTTTFRNSISIDYENRYTEFTF 230

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK----YLSDGH 282
               ++              E   W+     +++++ IP       S             
Sbjct: 231 GYEEDRVDYLSLNGEDKETREGIRWISYRQHFFSAILIPESPIPSASLTSVNLASDESLD 290

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
            ++   F  N    L   ++ T+   + G  ++ T+ + E DL      + + WG F +I
Sbjct: 291 EKFTKSFETNYPLTLNKGNLDTSLTFYFGPTDYKTLQNLEGDL---ETSIPMGWGIFGWI 347

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
            K +F+ +  F +   ++GIAI++ T+ V+L   P+  K YVS   MK ++P I+ +  K
Sbjct: 348 NKFIFLPLFEFLSSFLSYGIAIIVMTLIVRLAMSPVTYKSYVSQIKMKLLRPDIEVINGK 407

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           FK    +  Q+  + LY     NP++GC P L+Q+PVF+A++    ++  +R    + W 
Sbjct: 408 FKDDAVKR-QQETMSLYSRAGANPMSGCIPALIQLPVFYALFSFFPVAFVLRDKS-FLWA 465

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-------QMKMSPPPADKG 515
            DL++ D  ++  L   +PFY     HV ++PI+ S+++F        Q  M   P    
Sbjct: 466 DDLSSYD--SVLELGFNIPFYG---DHVSLFPILASIAIFFYTQMTTGQQSMPQQPGMPN 520

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
             +I+  MP++ +F  +++ +GL +Y+  SN+++I+   VI      +  +  ++     
Sbjct: 521 MKIIMYLMPLMMLFFFNNYASGLSLYYFVSNLLTILLMLVIKNFIIDDNKIHAKIEENKK 580

Query: 576 KNYN 579
           K   
Sbjct: 581 KPKK 584


>gi|295134749|ref|YP_003585425.1| inner hypothetical protein translocase component YidC [Zunongwangia
           profunda SM-A87]
 gi|294982764|gb|ADF53229.1| putative inner membrane protein translocase component YidC
           [Zunongwangia profunda SM-A87]
          Length = 621

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 103/573 (17%), Positives = 224/573 (39%), Gaps = 39/573 (6%)

Query: 25  YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID----DRAQALSMSPRVELKNPSLIG 80
              P   +     +N  T    +    + A   +           +      L+N  L  
Sbjct: 46  VTTPANADQQLANQNNTTAPATDSAAIAQAQSRLGAFGYSATLPSAEDKTTVLENDVLRL 105

Query: 81  SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140
            +  KG   ++  L+ Y      +S  V L+   N K      L++ +T        +  
Sbjct: 106 EVANKGGYIEEAVLKNYKT---YDSIPVYLVKDGNAKF----NLNFTTTDGRTLDTENLY 158

Query: 141 VWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL--FKIVDTVTNNSIDQIRFSP 198
               IS         +KL   +   + +   I   ++ +        + N        + 
Sbjct: 159 FEPSISKNGEDQVLSMKLKISDNEFLEYRYAIKPGDYMMDFNIRSQGLANTFNASQPINL 218

Query: 199 RGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKY 258
             ++  ++   + +                    KY D+         +  S++     +
Sbjct: 219 DWQLKGYRHSKSISYENKYTVLGY-----EYEGDKYDDLGHGEDEETEKDVSYIAYKQHF 273

Query: 259 WASVFIPSKETSFHSQFKYL----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE 314
           ++S+ +                   +    Y   F+AN    L    +      + G  +
Sbjct: 274 FSSILLTDTPFKTSKLTSQNLVEDEEIDTVYTKAFTANIPLELQAGELNYNMNWYYGPTD 333

Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374
           +  +  Y  D  +     L    + +          ++  +++ ++GIAI++ T+ V+++
Sbjct: 334 YKILKDY--DRNLDEIVPLGWGIFGWINKYVFIPFFAFLSSVLPSYGIAIIVMTIVVRIV 391

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434
             P+  K Y+S A MK ++P+I+E+ EK+K +  +  Q+  ++LY     +P++GC P L
Sbjct: 392 LSPVTYKSYLSQAKMKVLRPEINEINEKYKDNAMKK-QQETMKLYSKAGASPMSGCLPAL 450

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +QIP+F+A+++    + ++R    + W  DL++ D   I  L   +PFY     HV ++P
Sbjct: 451 MQIPIFYALFQFFPSAFQLRQKS-FLWADDLSSYDV--IAELPFHIPFYGE---HVSLFP 504

Query: 495 IIMSLSMFIQMKM--------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546
           I+ S+++FI M+M        +  P       ++   P++ +F  +++ +GL +Y+  SN
Sbjct: 505 ILASVAIFIYMQMTTGQSMQANQQPGMPNMKFLMYLSPIMMLFFFNNYASGLSLYYFTSN 564

Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           +I+I    VI  +   E  +  ++++  +K   
Sbjct: 565 LITIGIMLVIKHVIVDEDKIHAKIQANKAKPKK 597


>gi|307717725|ref|YP_003873257.1| hypothetical protein STHERM_c00080 [Spirochaeta thermophila DSM
           6192]
 gi|306531450|gb|ADN00984.1| hypothetical protein STHERM_c00080 [Spirochaeta thermophila DSM
           6192]
          Length = 573

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 118/589 (20%), Positives = 222/589 (37%), Gaps = 43/589 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           ME   N  +A+ LS +++       Q  ++    +      + + +     Q  +S    
Sbjct: 1   ME--RNVVIAVILSAVVIIVSAVINQMLFMSQVPQVPAPVEEEVLSETPTPQATSSQEGS 58

Query: 57  LIDDR---------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
            +            A   +    V  ++P +    + +G     L L  +         +
Sbjct: 59  SLLSEGLPSGLSVEALLPAEDREVVYRSPLMEVVFSSRGGTVRSLKLLTHR---DGEESV 115

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167
             +  P   +NA+   +         +L            +          +       +
Sbjct: 116 EMVYRPEGGRNAFSLSI------GKGDLLLDVPFQVRRPDERTVEFFQDVRLSGLPPFRV 169

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227
            +R     E YLF +   + N+    +  +  G +                         
Sbjct: 170 TKRYRFYPEEYLFDLEVELVNSENSSLPLNFEGVMYTLDTGPQIGPPFAALDRYGEYRKF 229

Query: 228 SL----VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
                   ++                +W+ IS KY+  + IP       +    +     
Sbjct: 230 FYFLNGKRKEVRLDPGKISELEEGDPTWVAISGKYFTLIAIPLLPQYDVAFSTVVEGDLP 289

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP------RFEMLIDWG 337
                +            IT     + G K    +  Y K             E ++D  
Sbjct: 290 LGSTVYLYRP--AARSARITDLYRFYVGPKISGELSKYNKKNENSAGLSELHLEKVVDTS 347

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
              ++   +   +  F+ ++ N+G+AI+L T+FVK+L FPL  K Y S + M+ + PK++
Sbjct: 348 LLGWLEGILKFFLQIFFRIIPNYGVAIILLTLFVKILLFPLTHKSYESASKMQQLAPKME 407

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           E+R ++K   PQ + + +  LY+   +NPL GC P+LLQIP+FFA+Y + S   ++R A 
Sbjct: 408 EVRNRYKD-DPQRMNQELALLYQKEGVNPLGGCLPLLLQIPIFFAMYGLFSSHFDLRGAT 466

Query: 458 FW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           F  GWI DL+  +    F      P  L G+  + + P+I+ ++  I  K++   +   Q
Sbjct: 467 FIPGWIDDLSVPESVFHFDT----PLPLLGWTDIRLLPLILVVTQIISTKITQGASSSSQ 522

Query: 517 AMI-LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
             + +  +PVVF+F L + PAGL++YW   N+ +I QQ  I ++   + 
Sbjct: 523 NQVFMYVLPVVFLFILYNAPAGLLVYWVAMNIFTIAQQLYINRVMKRKT 571


>gi|60682104|ref|YP_212248.1| putative inner membrane protein translocase component YidC
           [Bacteroides fragilis NCTC 9343]
 gi|253567112|ref|ZP_04844563.1| inner membrane protein oxaA [Bacteroides sp. 3_2_5]
 gi|81314832|sp|Q5LC41|OXAA_BACFN RecName: Full=Inner membrane protein oxaA
 gi|60493538|emb|CAH08325.1| conserved hypothetical membrane protein [Bacteroides fragilis NCTC
           9343]
 gi|251944236|gb|EES84745.1| inner membrane protein oxaA [Bacteroides sp. 3_2_5]
          Length = 618

 Score =  227 bits (577), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 99/600 (16%), Positives = 227/600 (37%), Gaps = 48/600 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49
           M+   N    + L  I++  +         +            +  +++     K    +
Sbjct: 1   MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKRYYDSIAVVQQQEEALRAKTEAAL 58

Query: 50  DNSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
            N       D  +              ++N  +  +++ KG +     L+ Y   +  + 
Sbjct: 59  ANEKEETAADSASLFFSATKGKEAFTTIQNNLVEITLDNKGGRVYSALLKNY---MGQDK 115

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             V L + S+    +           N +       +   +      +  ++L   +A+ 
Sbjct: 116 KPVVLFNGSDASMNFNFY--------NKKGALQTKDFYFEAVNKTDSSVTMRLAADSASY 167

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           I F  T+  D + +  ++     +       +        + +     +  +     +  
Sbjct: 168 IDFIYTLKPDNYLMSFVIKATGMDGKLAASTNYVDISWSQRARQIEKGYTYENRLADLTY 227

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
             +  +       K    +  E   W+   +++++SVFI  ++    +    +    + Y
Sbjct: 228 KYTGDDVDNLSASKDDEKSVSERLDWIAFKNQFFSSVFIAEQDFEKTTVKSKMEKQGSGY 287

Query: 286 QAKFSANE-ITILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGWFY 340
              +SA       P     T  + + G   + T+       E+   +     L      +
Sbjct: 288 IKDYSAEMSTFFDPTGKQPTDMYFYFGPNHYKTLTALDKGREEKWELNNLVYLGWPLIRW 347

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   +  +      + GI ++L T+ VK++ FP   K Y+S+A M+ ++PKIDE+ 
Sbjct: 348 INKWITINVFDWLSGWGLSMGIVLLLLTIMVKIVVFPATWKTYMSSAKMRVLKPKIDEIN 407

Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +K+ +       Q+ ++ LY  + ++P+ GC P+LLQ P+  A++  +  ++E+R    +
Sbjct: 408 KKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS-F 466

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD------ 513
            W  DL+  D     T    +PF      H+ ++ ++M+++  +  K +    D      
Sbjct: 467 LWADDLSTYD--AFITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMQQQDTGAQPQ 521

Query: 514 -KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
                 ++  MP++F+F L+ +P+GL  Y+  S +IS+V   +I++    E  L+  L +
Sbjct: 522 MAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFISTLISVV-TMIILRRTTDENKLLTELEA 580


>gi|126661858|ref|ZP_01732857.1| putative inner membrane protein translocase component YidC
           [Flavobacteria bacterium BAL38]
 gi|126625237|gb|EAZ95926.1| putative inner membrane protein translocase component YidC
           [Flavobacteria bacterium BAL38]
          Length = 628

 Score =  227 bits (577), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 113/619 (18%), Positives = 230/619 (37%), Gaps = 56/619 (9%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRI----------------EEMNNERKNIQ 41
           ME      N  +   L   I+  W  +   P                  +E+      I+
Sbjct: 1   MEEKKLDLNSIIGFVLISGILI-WMLWSNAPTPEEIKEKEKKEQVEKQAKEVKTITSTIE 59

Query: 42  TVKQPNQVDNSYAAVLIDD----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97
                +   N+ A   +           +     E+KN  L   I+ KG    +  + G+
Sbjct: 60  AAPVADSTKNAAAQAQLGSFGYSATLPSATDAVTEIKNEVLSLKISNKGGYIVEATVLGF 119

Query: 98  HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157
                +++  V ++  +N      A LD     ++    ++  ++             + 
Sbjct: 120 DQFEKNSNKAVKIIKDNN------ASLDITLNTSDNRALHTKDMYFEPKVTTEGKNQVLT 173

Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           L  K   +   E    L  +         +      +  S    ++              
Sbjct: 174 LQLKAGPDQFLEYRYVLKPNEYMLDFAIRSQGLEKVVNTSKPLDLVWQLKTYRNEKSVTY 233

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS----FHS 273
           E     L  +    +           +  +  S++      + S+ +   +         
Sbjct: 234 ENRYTELVFEYEDGKDDYLNAAKDSEDEAKDVSYIAFKQHLFTSILLTDTKFKTAKFNSD 293

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
                 +    +   F+A         ++      + G  ++  ++ YE++L       L
Sbjct: 294 NLVDNEEVDTVFTKNFTAQVPLEFKNGALNYNMNWYYGPAKYEILNGYERNLDEIM--PL 351

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
               + +        +  +   L   FGIAI+L T+ V+++  P+  K Y+S A MK ++
Sbjct: 352 GWGIFGWINRYIFIPVFGFISGLGIGFGIAIVLFTILVRIVMSPVTYKSYLSQAKMKVLR 411

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P+I EL EKFK +P +  Q+  ++LY    +NP+AGC P ++Q+P+F+A+++      ++
Sbjct: 412 PEIAELNEKFKDNPMKK-QQETMKLYSKAGVNPMAGCLPAVMQMPIFYALFQFFPSMFDL 470

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS----- 508
           R    + W  DL++ D  +I+ L   +PFY     HV ++PI+ S+++F  MKM+     
Sbjct: 471 RQKS-FLWADDLSSYD--SIYQLPFHIPFYGS---HVSLFPILASIAIFFYMKMTTGDQA 524

Query: 509 ----PPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
               P         I+  M    P++ +F  +++ +GL +Y+  SN+I+I    VI    
Sbjct: 525 MSTPPQEGMPDMGKIMKIMIYISPLMMLFFFNNYASGLSLYYFISNLITIGIMLVIKNYI 584

Query: 561 GAEIGLIDRLRSTFSKNYN 579
             E  +  +++   +K   
Sbjct: 585 VKEDKIHAQIQENKTKEKK 603


>gi|328946937|ref|YP_004364274.1| Membrane protein oxaA [Treponema succinifaciens DSM 2489]
 gi|328447261|gb|AEB12977.1| Membrane protein oxaA [Treponema succinifaciens DSM 2489]
          Length = 602

 Score =  227 bits (577), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 128/599 (21%), Positives = 231/599 (38%), Gaps = 32/599 (5%)

Query: 1   MERNWNYFVAIALSVIIV---YAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDN 51
           ME   N  +AIALS I++      Q  YV PR +E   E+      K  +   Q      
Sbjct: 1   ME--KNTILAIALSTIVLVVSLFIQTKYVMPRQQERAREQAAEFEAKKEEQEAQIKAEKE 58

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
             +A   +   Q         +       +   +G       L  +          V ++
Sbjct: 59  MISASFSEATVQNSEDVQEFVISTNKAKVTFTNRGGDITSYKLLEHKDK--ETGSGVEMV 116

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           +   + N  F+     +    +    + T  +  +                    L +R 
Sbjct: 117 NNVTSSNRAFSLSFCGTENPALNDIFNVTKKDDYTILFYRDYEIKDSEGNPKKFTLGKRY 176

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
               + Y FK+  ++ +    +         +R  PQ        ++    V    +L  
Sbjct: 177 TFSPDDYAFKLDVSIISKEGGEFGIGGAAYTLRTAPQ--IGPKYDKKNRYEVRQFLALNG 234

Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
            K      S       S  W G+  KY+  +  PS  +    + K  +        +   
Sbjct: 235 GKKFRKNISDKFYDLNSVDWAGVGGKYFTMLVKPSSPSDMLGKIKVSTKSENEDGCQIFI 294

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID------WGWFYFIAKP 345
               +L   S  T        +E   I + ++                   G+  +I   
Sbjct: 295 PRKPVLDETSNDTYYIYVGPRQERELIKYNDQTKNAWNLSNAKFNEALQTTGFLSWIEII 354

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +   +     +  N+GI+I++ T+ +K++ FPL K   V +  M+ IQPK+  L+EK+K 
Sbjct: 355 LKWCLEKINLIAHNWGISIIILTILLKIVLFPLNKNAAVGSLKMQKIQPKMKVLQEKYKN 414

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKD 464
              Q L   M +LYK    NP++GC P+++Q+ + FA+Y V +   E R A F  GWI+D
Sbjct: 415 -DQQKLSMEMQKLYKEAGYNPMSGCLPMVVQMFILFALYNVFNNYFEFRGASFVKGWIED 473

Query: 465 LAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMKMSP-----PPADKGQAM 518
           L+A D  +I+T    +PF     M+ + + P I + S  +  K++        A++ Q  
Sbjct: 474 LSAGD--SIWTWKRNIPFISAFTMNNLRLLPFIYTASQLLNGKITQYGNPGTGANQSQMK 531

Query: 519 ILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
            + + MP++F F   + P+GL++YW+ SN+I I QQ VI  +   +   ++  ++    
Sbjct: 532 FMMYGMPLMFFFLFYNVPSGLLLYWAVSNIIQIGQQLVINSVMNKKRSELENEKTVNKN 590


>gi|53713895|ref|YP_099887.1| putative inner membrane protein translocase component YidC
           [Bacteroides fragilis YCH46]
 gi|265764240|ref|ZP_06092808.1| inner membrane protein oxaA [Bacteroides sp. 2_1_16]
 gi|81690656|sp|Q64T26|OXAA_BACFR RecName: Full=Inner membrane protein oxaA
 gi|52216760|dbj|BAD49353.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|263256848|gb|EEZ28194.1| inner membrane protein oxaA [Bacteroides sp. 2_1_16]
 gi|301163574|emb|CBW23125.1| conserved hypothetical membrane protein [Bacteroides fragilis 638R]
          Length = 618

 Score =  226 bits (576), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 99/600 (16%), Positives = 227/600 (37%), Gaps = 48/600 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49
           M+   N    + L  I++  +         +            +  +++     K    +
Sbjct: 1   MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKRYYDSIAVVQQQEEALRAKTEAAL 58

Query: 50  DNSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
            N       D  +              ++N  +  +++ KG +     L+ Y   +  + 
Sbjct: 59  ANEKEETAADSASLFFNATKGKEAFTTIQNNLVEITLDNKGGRVYSALLKNY---MGQDK 115

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             V L + S+    +           N +       +   +      +  ++L   +A+ 
Sbjct: 116 KPVVLFNGSDASMNFNFY--------NKKGALQTKDFYFEAVNKTDSSVTMRLAADSASY 167

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           I F  T+  D + +  ++     +       +        + +     +  +     +  
Sbjct: 168 IDFIYTLKPDNYLMSFVIKATGMDGKLAASTNYVDISWSQRARQIEKGYTYENRLADLTY 227

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
             +  +       K    +  E   W+   +++++SVFI  ++    +    +    + Y
Sbjct: 228 KYTGDDVDNLSASKDDEKSVSERLDWIAFKNQFFSSVFIAEQDFEKTTVKSKMEKQGSGY 287

Query: 286 QAKFSANE-ITILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGWFY 340
              +SA       P     T  + + G   + T+       E+   +     L      +
Sbjct: 288 IKDYSAEMSTFFDPTGKQPTDMYFYFGPNHYKTLTALDKGREEKWELNNLVYLGWPLIRW 347

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   +  +      + GI ++L T+ VK++ FP   K Y+S+A M+ ++PKIDE+ 
Sbjct: 348 INKWITINVFDWLSGWGLSMGIVLLLLTIMVKIVVFPATWKTYMSSAKMRVLKPKIDEIN 407

Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +K+ +       Q+ ++ LY  + ++P+ GC P+LLQ P+  A++  +  ++E+R    +
Sbjct: 408 KKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS-F 466

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD------ 513
            W  DL+  D     T    +PF      H+ ++ ++M+++  +  K +    D      
Sbjct: 467 LWADDLSTYD--AFITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMQQQDTGAQPQ 521

Query: 514 -KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
                 ++  MP++F+F L+ +P+GL  Y+  S +IS+V   +I++    E  L+  L +
Sbjct: 522 MAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFISTLISVV-TMIILRRTTDENKLLTELEA 580


>gi|332877632|ref|ZP_08445375.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684381|gb|EGJ57235.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 606

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 119/603 (19%), Positives = 232/603 (38%), Gaps = 43/603 (7%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME         +   L   I+  W      P  EE+   +   +   + N   N+ A   
Sbjct: 1   MEEKKFDLKSIIGFVLIF-ILLLWVMNNNRPTQEELAKRKAEQEQAAKANNPQNNAATAA 59

Query: 58  ID-------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
                      AQ  +      ++N  +  +IN KG    ++ L+ +       S  V L
Sbjct: 60  TADLGAFAYSNAQPTAKDGVTVIENKDVKLTINNKGGDLKEVLLKQFKT---YESMPVYL 116

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170
           +   N      A           +  N+  ++   S         + +  K   N   E 
Sbjct: 117 IKDKN------AIFALNFKTTQGQELNTQQLYFEPSLSQKDGKQLLSMKVKTGENSYLEY 170

Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
             +L  E Y+  +       S      +P   +   K +    +   +  +       + 
Sbjct: 171 VYTLPAEGYMVDVAVRSQGLSGVLNSQNPIELVWGLKARRMEKSVTYENRYTQSAIRYAD 230

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
            +      +  +     E  SW+      + SV I     +      Y          K+
Sbjct: 231 DKIN-RMSQGGNSGTKEEQVSWVAYKQHLFTSVLISDSAFANGDFLSYNIANEESKDVKY 289

Query: 290 SANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
           + N  +  P    G  ++ +   + G  ++  +  Y     +    + + WG F ++ K 
Sbjct: 290 TKNLKSTFPLKTKGGELSESLHFYFGPSDYNVLKQYNDKYELTEL-IPLGWGIFGWLNKW 348

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +F+ +  F     + G+ I+L T+ V+LL  P+  K YVS A MK ++P+I+E+ +K+  
Sbjct: 349 LFIPLYNFLADYFSVGLVIILMTIIVRLLLSPIVYKSYVSQAKMKVLRPEIEEINKKY-- 406

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
             P   Q+  + LY    +NP++GC P LLQ+PVF A++        +R    + W +DL
Sbjct: 407 EEPMKRQQETMALYSKAGVNPMSGCIPALLQLPVFLALFNFFPTEFGLRQKS-FLWAEDL 465

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI--LNW 522
           ++ D   IF L   +PFY     HV ++P++ S+++FI   M+        Q  +  + +
Sbjct: 466 SSYD--AIFELPFSIPFYGS---HVSLFPLLASVAIFIYSMMTMAQTVQPQQPGMPNMKF 520

Query: 523 M----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           +    PV+ +F  +++ +GL +Y+  SN+++I+    I      E  +  +++       
Sbjct: 521 LIYLSPVMMLFFFNNYASGLSLYYFVSNLLTILIMLAIKHWILDEKKIHAQIQEN-KMKP 579

Query: 579 NSQ 581
             +
Sbjct: 580 KKE 582


>gi|325297917|ref|YP_004257834.1| Membrane protein oxaA [Bacteroides salanitronis DSM 18170]
 gi|324317470|gb|ADY35361.1| Membrane protein oxaA [Bacteroides salanitronis DSM 18170]
          Length = 621

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 103/602 (17%), Positives = 226/602 (37%), Gaps = 47/602 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPR------------IEEMNNERKNIQTVKQPNQ 48
           M+   N  V   L   ++  +  +    +            IE +  +++ +Q  ++   
Sbjct: 1   MD--KNTLVGFVLIGAVIVGFSIYSRPSQEEMERAQHYQDSIETVVRQQEQMQKAQEAEA 58

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
           V            A          L+N  +  + + KG +     L+ Y+         +
Sbjct: 59  VQTLRLDSTSQFFAHTQGSEEFTVLENNVVQLTFSNKGGRVSKAMLKEYN---DQQKQPL 115

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
            L    +      A L++        + +S   +  +   +   T  ++L  +N  ++ F
Sbjct: 116 VLFDGED------ASLNFGFEGKTENIMSSGLYFQPV--NVTDTTVTMRLNAQNGGHLDF 167

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
              +  D + L   +      +               + +     +  ++ + ++    +
Sbjct: 168 IYRLLPDSYMLDFTIQASGLQNFFSPSVKTMTIDWNQRARQMEKGYNFEQRYTSLTYKPA 227

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
                Y    K       E+  W+   ++Y++ VF+  K     +    +    + Y  +
Sbjct: 228 GESFDYLSETKDEKETIPEALDWVAFKNQYFSCVFMAEKNFENATLDSKMEQKESGYMKR 287

Query: 289 FSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEK---DLAIPRFEMLIDWGWFYF--- 341
           + A+  T   P  +  +    + G   F T+    K   D      E L+  GW      
Sbjct: 288 YHADMQTAFDPTGAQPSHFQFYFGPNHFKTLLASNKLSFDNKDQELEDLVYLGWPIIRLI 347

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
                  L  +   +  + GI I+L T+ VK+L  P   K ++S+A M+ ++P +D++ E
Sbjct: 348 NRWFTINLFDWLSGMGLSMGIVILLMTIIVKILVLPTTWKSFISSAKMRALKPYVDKINE 407

Query: 402 KFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           K+ +       Q+  + LY  + ++P+ GC P+L+Q PVF A++  +  ++E+R    + 
Sbjct: 408 KYPKQEDALKKQQETMSLYSQYGVSPMGGCLPMLIQTPVFMALFFFVPNAIELRQQS-FL 466

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD------- 513
           W  DL+A D    ++    +P       H+ ++ ++ S +  I   +     D       
Sbjct: 467 WADDLSAYDDLIHWST--SIPLLGN---HLSLFCLLFSATTVINQIVMMKQQDTGANPQM 521

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
                ++  MPV+F F  + + +GL  Y+  S ++ I+    +M+    E  L+ +L + 
Sbjct: 522 AAMKWMMYIMPVMFFFIFNEYASGLSYYYFISGLLGIL-TLWVMRRMTDEKKLLAQLDAN 580

Query: 574 FS 575
             
Sbjct: 581 KK 582


>gi|78776724|ref|YP_393039.1| putative inner membrane protein translocase component YidC
           [Sulfurimonas denitrificans DSM 1251]
 gi|78497264|gb|ABB43804.1| protein translocase subunit yidC [Sulfurimonas denitrificans DSM
           1251]
          Length = 536

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 130/582 (22%), Positives = 232/582 (39%), Gaps = 57/582 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV---- 56
           M  N    +A+ LS +   A+   Y   +  E    + + +   +  +       V    
Sbjct: 5   MTPNQRLIIAVLLSFVFFIAYTAIYPTEQPTETAQVQNSTEQKVELKEAPKVEDIVGHKI 64

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
              +   A  +S    LK+   I  I+  G +     L       ++N  +   L P + 
Sbjct: 65  SAQEATIANDLSTLTTLKSNDFILKIDTLG-RISSKVLLQ--EMYNTNDNVHAQLIPQSG 121

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
               F      +                IS   L  T    ++ +  +N+   + I+   
Sbjct: 122 TKPLFIRFLDPALNEE---ATKIPYTADISEINLQDTPQKVVLTQKLSNLTVTKEITFYA 178

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
              + +  ++T +         +   +    +   N        +  L           +
Sbjct: 179 DGHYDVDVSLTQD---------KRYFIYLGQRPKVNEKEQMMAAVGALIYNDEELLTIIE 229

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
              ++    +         D+Y AS+       S  +      D  +     F A +   
Sbjct: 230 DGDANERKSYSHIELAAAFDQYSASIMY---GFSKDTNIIIDRDRDSNPIVYFEAVQNMK 286

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
             G         + G K + T+H  +     P     I++GWF F +KP+F L+ + + L
Sbjct: 287 FSG---------YIGQKRYKTLHAIK-----PILTNAIEYGWFTFASKPLFQLLMWLHGL 332

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           +GN+G +I+  TV ++++ +PL  K  VS   MK+I P++  L+ K+K   PQ +  A++
Sbjct: 333 IGNWGWSIVALTVLIRVVLYPLTYKGMVSMQKMKDIAPQVKALQAKYKG-DPQRMNAAVM 391

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            +YK H  NPL GC P+LLQIPVFFAIY+V+  ++E++ AP+  W+ DL+  D T     
Sbjct: 392 DMYKKHGANPLGGCLPMLLQIPVFFAIYRVLLNAVELQGAPWMLWVNDLSRMDSTF---- 447

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535
                          + PI+M  SM+ Q K++P    D  Q  I  ++P++F F   +FP
Sbjct: 448 ---------------VLPILMGASMYYQQKLTPSNFTDPLQEKIFKFLPIIFTFFFITFP 492

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           +GL++YW  +N+ SI QQ ++ +                 K 
Sbjct: 493 SGLVLYWFVNNMFSIGQQFIVNQQFKNAKDAQIAAHKNVEKK 534


>gi|330752544|emb|CBL87491.1| inner membrane protein translocase component YidC [uncultured
           Flavobacteria bacterium]
          Length = 564

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 112/580 (19%), Positives = 230/580 (39%), Gaps = 37/580 (6%)

Query: 8   FVAIALSVIIVYAWQNF-YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66
            V   L  I++  +  F +   + EE     ++IQ   + + +  +   +        + 
Sbjct: 9   LVGFVLIAIVLIFFNVFIFPKFQPEEKETASQSIQDFSRNDNLLKNEEVL------DDII 62

Query: 67  MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126
                 L+N  +   I+  G + +++ L+ Y            L +  +T  +     + 
Sbjct: 63  SEKLFTLENEKIKLLISNIGGRINEVILKEYKNYSGDELK---LFTADSTSFSLDFLTNK 119

Query: 127 VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTV 186
                N                I + +  +KL    +N+   +   ++D  Y   +    
Sbjct: 120 NIKTENRNFIA-----------IDSSSNFLKLRCLVSNDSYIDYVYTIDNDYKVDLDLEF 168

Query: 187 T--NNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244
              +  I +             PQT  +    +         K+  E     + K S  +
Sbjct: 169 YGLDELIPRNVNYMNLEWKMKTPQTEKSKKNQEMYTGIYYQFKADNEVDNLSLTKDSEKD 228

Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN-EITILPGKSIT 303
              + +W+    ++++++FI     S     K   + ++ Y  + SA  EI      +  
Sbjct: 229 IKSNLNWVAFKQQFFSAIFISKNGFSKPISLKVSKNENSIYIKELSAKFEIPYGHNSTEK 288

Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363
            +   + G   +PT+ +Y  D        L    + +     +  L  +      N+G+ 
Sbjct: 289 HSFQFYFGPNHYPTLKNY--DSGFEEIIPLGWSLFRWVNKYIIINLFDFLSKYFNNYGLI 346

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L T+ +KL   P   K Y+S A MK ++P+ID++ +K     P  +Q+A + LY+   
Sbjct: 347 ILLLTIIIKLALAPFTYKAYLSQAKMKVLKPEIDKISDK--DKDPMKVQQATMNLYRKAG 404

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           +NP+ GC P+L Q P+  A+++    S+E+R    + W  DL+A D  +I  L   +PFY
Sbjct: 405 VNPMGGCLPMLFQFPILIAMFRFFPASIELRQKS-FLWADDLSAYD--SILELGFNIPFY 461

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMS--PPPADKGQAM-ILNWMPVVFVFALSSFPAGLII 540
                HV ++ ++M++S  +  +M+         Q   ++  MP++F+   +++ AGL  
Sbjct: 462 G---DHVSLFTLLMTISTLLYTRMNTSMATGQMAQMKWMMYLMPIMFLGFFNNYAAGLSY 518

Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           Y+  +N+ +  QQ  + K    +  L+  +     K    
Sbjct: 519 YYFLANMFTFGQQYFMKKFFINDDALLAEIEKNKRKPRKK 558


>gi|254495503|ref|ZP_05108427.1| 60Kd inner membrane protein [Polaribacter sp. MED152]
 gi|85819859|gb|EAQ41016.1| 60Kd inner membrane protein [Polaribacter sp. MED152]
          Length = 625

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 104/622 (16%), Positives = 239/622 (38%), Gaps = 62/622 (9%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPR-------------IEEMNNERKNIQTVK 44
           ME+     N F+ + L   I+     ++   +                 NN+++N + + 
Sbjct: 1   MEQKKFDYNSFIGMILLAGILL---WYFNTNKPEELEEQQPQEIVETTSNNDKENTKNIA 57

Query: 45  QPNQVDNSYAAVLIDDRAQALSMSP------RVELKNPSLIGSINLKGAQFDDLNLRGYH 98
            P   ++S   + + ++  A + S          ++N  +  +I+ KG Q     ++ Y 
Sbjct: 58  APVFENDSLKQIALQNKLGAFAQSALNGKEGTTVIENSLVKLTIDNKGGQIVKALVKNYQ 117

Query: 99  LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158
                +S  + ++  +N      A  +      +  + N+  ++   S       T + +
Sbjct: 118 T---YDSLPLYMIKDNN------ASFNINFGTTDNRILNTKDLFFEPSLTNSGENTVLSM 168

Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218
             K +++   E    +     F +  ++ +  +D +  S    I               +
Sbjct: 169 KLKVSDSQYLEYRYEVKPDDYF-VDFSIRSQGLDGVFNSSNP-INLDWTLDGFRHERSLK 226

Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
               +        +   +   +  +       W+     ++ S  +     +  +     
Sbjct: 227 TENTMYSYYYYKSEDEVEYLNAGNTEIANDIDWVAYKQHFFMSNLLTDTPFNNATVTSSD 286

Query: 279 SDGHARYQAKFSANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
                +    F+       P    G  +      F G  ++  +  +E        ++  
Sbjct: 287 LVEDEKLDTVFTKRYELKTPLALTGGELNYNMKWFYGPSDYNLLKTFEGTDLDETADLG- 345

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
              + +      + + +     + N+G+ I+L T+ V++L  PL  K Y+S+A MK I+P
Sbjct: 346 WGIFGFLNRNVFYPVFNLLEGFLTNYGLIIILMTIVVRILMSPLVYKSYLSSAKMKVIRP 405

Query: 395 KIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           ++ EL +K+         Q+  + + +   +N ++GC P LLQ+P+FFA++K    ++ +
Sbjct: 406 ELQELNKKYPGKENAMKRQQETMAIQRKAGVNMMSGCIPALLQMPIFFALFKFFPTNIAL 465

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R    + W  DL++ D   IF L   +PFY     HV ++PI+ S+++F  M+M+     
Sbjct: 466 RQES-FLWAPDLSSYDV--IFNLPFEIPFYG---DHVSLFPILASIAIFFYMRMNQSQQA 519

Query: 514 KGQA----------MILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
             QA           ++ +M    P++ +   + + +GL +Y+  SN+++I    VI   
Sbjct: 520 NMQAPTQEGMPDMSKMMKYMIYFSPIMMLIFFNRYASGLSLYYFISNLLTISIMLVIKNY 579

Query: 560 HGAEIGLIDRLRSTFSKNYNSQ 581
              E  +  ++     +   ++
Sbjct: 580 VIDEEKIHAQIEENKKRPEKAK 601


>gi|198275307|ref|ZP_03207838.1| hypothetical protein BACPLE_01468 [Bacteroides plebeius DSM 17135]
 gi|198271890|gb|EDY96160.1| hypothetical protein BACPLE_01468 [Bacteroides plebeius DSM 17135]
          Length = 619

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 101/604 (16%), Positives = 218/604 (36%), Gaps = 39/604 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V   L   ++  +   Y  P  EE    +    +++Q  +            
Sbjct: 1   MD--KNTLVGFILIGAVIVGFGI-YNRPSQEERARAQHYQDSIQQVIKQQEEAQEKQAAA 57

Query: 61  R-------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
                           A        L+N  +  + + KG +     L+ Y          
Sbjct: 58  AIEAARPDSTSLFFQAAQGTEQFTVLENELVQLTFSNKGGRVSKALLKEYK---DQKKQP 114

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167
           + L    +      A +++     N  + +    +   +  +   T  ++L   N  ++ 
Sbjct: 115 LVLFDGED------ASMNFGFEGKNENILSQQMYF--EATNVTDSTVTMRLNAANGGHLD 166

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227
           F   +  + + +   V      +             + + +     +  ++ + ++    
Sbjct: 167 FNYRLLPNSYMVDLTVQASGMQNFFSPSTKSMNIEWKQRARQMEKGYNFEQRYTSLTYKP 226

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
                 Y    K       ES  W+   ++Y++ VF+  +     +    +    + Y  
Sbjct: 227 VDDSFDYLSETKDEKETIPESLDWVAFKNQYFSCVFMAEQNFDNATLESKMEQQGSGYMK 286

Query: 288 KFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHH------YEKDLAIPRFEMLIDWGWFY 340
            ++A+  T   P  +  +    + G   F T+         +KD  +     L       
Sbjct: 287 NYAADMKTAFDPTGAKASHMQFYFGPNHFKTLLASNDLSFKDKDQELEDLVYLGWPIIRL 346

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   L  +      + G+ I+L T+ VK+L  P   K ++S+A M+ ++P +D++ 
Sbjct: 347 INRWFTINLFDWLSGWGLSMGMVILLMTIIVKVLVLPTTWKSFISSAKMRALKPYVDKIN 406

Query: 401 EKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
            K+ +       Q+  + LY+ +N++P+ GC P+LLQ PVF A++  +  ++E+R    +
Sbjct: 407 AKYPKQEDALKKQQETMALYRQYNVSPMGGCLPMLLQTPVFMALFFFVPNAIELRQQG-F 465

Query: 460 GWIKDLAAADPTNIF--TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            W  DL+A D    +   +  +        +   I  ++  + M  Q  M   P      
Sbjct: 466 LWADDLSAYDDLISWSYHIPLLGNHLSLFCLLFSITTVLNQIIMMKQQDMGNNPQMAAMK 525

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
            ++  MPV+F F  + + +GL  Y+  S +I I+    IM+    E  L+ +L +   + 
Sbjct: 526 WMMYIMPVMFFFIFNDYASGLSYYYFISGLIGII-TMWIMRRMTDEKKLLAQLEANKKEP 584

Query: 578 YNSQ 581
              +
Sbjct: 585 SQQK 588


>gi|218461068|ref|ZP_03501159.1| putative inner membrane protein translocase component YidC
           [Rhizobium etli Kim 5]
          Length = 341

 Score =  224 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 135/341 (39%), Positives = 189/341 (55%), Gaps = 16/341 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM----------------NNERKNIQTVK 44
           ME N NYF+AIALSV+IV  WQ  Y+ PRIE                          T  
Sbjct: 1   MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGTTPA 60

Query: 45  QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
             +    S  A       QAL+ +PRV +  P+L GSINL GA+ DDL L+GYH  V  +
Sbjct: 61  PTSGTAPSGQAAATATLEQALAKNPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDS 120

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
           SPI+TL SP+ TK+ YF EL Y+ +     +P ++T+W    G  LT  TP+ L + N  
Sbjct: 121 SPIITLFSPAETKDGYFTELGYIGSDATGAVPGASTLWTAPEGAKLTEKTPVTLSYTNDK 180

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
            + F RTIS+DE Y+F + D + N     +  S  GR+ R+   T  + + + EGFI V+
Sbjct: 181 GLTFTRTISVDERYMFTVADKIENTGQAPVSLSSYGRVTRYNKPTTPSVYVLHEGFIGVI 240

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
           GD  LVE KYS +EK ++     +  WLGI+DKYWA+  +P + +++ ++F + +DG  R
Sbjct: 241 GDDGLVETKYSAVEKEAVMPAKSTGGWLGITDKYWAATIVPPQTSAYEARFSHFADGQPR 300

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325
           YQA +  +  T+ PG+SI   N +FAGAKE P I  YE   
Sbjct: 301 YQADYKDDAFTVAPGQSIELKNLVFAGAKEVPVIDGYEASY 341


>gi|317011581|gb|ADU85328.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori SouthAfrica7]
          Length = 548

 Score =  224 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 133/582 (22%), Positives = 230/582 (39%), Gaps = 64/582 (10%)

Query: 1   MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M++N N      +A+ALS + +  +  F+  P        ++ +         +   A  
Sbjct: 1   MDKNNNTNLRLILAVALSFLFITLYSYFFQKPNKTTTETTKQEVTHNNTALNPNAPTATQ 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLS 112
                      +    +        I+  G +   + L+                  L S
Sbjct: 61  NFSATQTIPQENLLSAISFEHARIEIDFLG-RIKQVYLKDKKYLTPKQKGFFEHVSHLFS 119

Query: 113 PSNTKNAYFAELDYVSTA---------NNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
              +      EL  +            +      +       S   L P   + L     
Sbjct: 120 SKESVQPPLKELPLLGDNLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLG 179

Query: 164 NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
           + ++ +     D+ HY  +I     NN        P   I       A        G + 
Sbjct: 180 DLVIIKTLTFYDDLHYDLQIAFKSPNN------IIPSYVITNGYRPVADLDSYTFSGVLL 233

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
              DK + + +  D   +       +  +L   D+Y+ ++        F           
Sbjct: 234 ENNDKKIEKIEDKD---AKEIKRFSNILFLSSVDRYFTTLLFTDNPQGFEVLI------- 283

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
              +         I      T     + G K++ ++         P     I++G   F 
Sbjct: 284 -NPETGTKNPLGFISLKNEATL--HGYIGPKDYRSLKAIS-----PMLTDAIEYGLITFF 335

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           AK +F+L+ Y Y  VGN+G AI+L T+ V+++ +PL+ K  VS   +K + PK+ EL+E+
Sbjct: 336 AKGVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEE 395

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +K   PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+  ++E++ + +  WI
Sbjct: 396 YKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWI 454

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILN 521
            DL+  DP                     I P++M  SM+    ++P    D  QA I  
Sbjct: 455 HDLSIMDPYF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFK 495

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            +P++F   L +FPAGL++YW+ +N++S++QQ +I K+   +
Sbjct: 496 LLPLLFTLFLITFPAGLVLYWTTNNILSVLQQLIINKVLENK 537


>gi|42527897|ref|NP_972995.1| putative inner membrane protein translocase component YidC
           [Treponema denticola ATCC 35405]
 gi|81700132|sp|Q73JM1|OXAA_TREDE RecName: Full=Inner membrane protein oxaA
 gi|41818942|gb|AAS12914.1| inner membrane protein [Treponema denticola ATCC 35405]
          Length = 582

 Score =  223 bits (568), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 118/588 (20%), Positives = 240/588 (40%), Gaps = 36/588 (6%)

Query: 4   NWNYFVAIALSVIIVYAW----QNFYV-------YPRIEEMNNERKNIQTVKQPNQVDNS 52
             N  +A+ LS+++   W    Q ++         P  +       + +   Q +    S
Sbjct: 2   KKNTVLAVVLSMLVFGGWLYIQQKYFPTEYNVPQKPVAQAQGQNPTSSEIAVQTSSNQIS 61

Query: 53  YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
            + +     +   S      ++   +      KG       L+ +     S+  +  + +
Sbjct: 62  NSMIEAVADSDYPSREQTYVIETDIIRAVFTNKGGDIISYKLKEH-ASAGSDERVEMIEN 120

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF---E 169
            +    A    L          L N          K +     IKL   + +  +F   +
Sbjct: 121 VTERNRALSLALGGHDAQAVDLLFNVKEESLSDGRKQIGFYRDIKLKNTDGSETVFTLAK 180

Query: 170 RTISLDEHYLFKIVDTVTNNSID---QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
           R   +   Y+F +  T+             S        +     +    +  + A+   
Sbjct: 181 RYTFIPGDYMFTLEVTIDGKEGMRGLSFGDSAYTLRSAPQIGPEWDKVNDKYEYRALSYF 240

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
            +  +++   I        ++  SW+ +S KY++ + IP              +G   + 
Sbjct: 241 ANEKKKEDRSITDGKTKAVNDLASWVSVSGKYFSFIIIPKDPIQKMFFSGIKEEGAKLHN 300

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY----EKDLAIPRF---EMLIDWGWF 339
           ++F  +   I+ G +      ++ G      ++ Y      +          +    G+ 
Sbjct: 301 SQFFISRQPIV-GNAAYDQYRVYIGPSSEKILNSYNSAAANNYGYENLRIDSLAASSGFL 359

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             + + +  +M  FY ++ N+G+A++L T+ ++++FFPL KK   +T  M+ +QP+I+EL
Sbjct: 360 APLERVLKFVMEIFYKIIPNWGVALLLLTLLMRIIFFPLTKKSSEATKRMQELQPQINEL 419

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           ++K+K +P Q L   M++ YK    NP +GC P+L+Q+P  FA++ + +   E R A F 
Sbjct: 420 QQKYKNNP-QKLNAEMVKFYKEAGYNPASGCLPLLIQLPFLFAMFGLFNNYFEFRGASFI 478

Query: 460 -GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ-- 516
            GWI DL+  D  +I      +PF    +  + + PII + S  +  K++  P    Q  
Sbjct: 479 PGWIPDLSVGD--SILKFGFTIPFL--NWTDLRLLPIIYTASQLLHGKLTQTPGQSQQNP 534

Query: 517 -AMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
              I+  +MP+ F F   + P+GL+++W++SN++ ++QQ +I K    
Sbjct: 535 SMKIMIYFMPLFFFFLFYNAPSGLLLFWTFSNILMLLQQLIINKSMKK 582


>gi|254672457|emb|CBA05875.1| 60kDa inner-membrane protein [Neisseria meningitidis alpha275]
          Length = 298

 Score =  223 bits (568), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 94/263 (35%), Positives = 145/263 (55%), Gaps = 25/263 (9%)

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
             G     +  L+AG +    I +   +      ++  D+G  ++ A P+F L++  +N+
Sbjct: 49  QNGAKSEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFASPLFWLLNQLHNI 103

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           +GN+G AI++ T+ VK + +PL    Y S A M+   PK+  ++EK+        Q+AM+
Sbjct: 104 IGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGD-DRMAQQQAMM 162

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           QLYK   INPL GC P+LLQIPVF  +Y  +  S+E+R AP+ GWI DL+ +DP      
Sbjct: 163 QLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRSDPYY---- 218

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536
                          I PIIM+ +MF Q  ++PPP D  QA ++  MP+VF      FPA
Sbjct: 219 ---------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFFPA 263

Query: 537 GLIIYWSWSNVISIVQQAVIMKM 559
           GL++YW  +N+++I QQ  I + 
Sbjct: 264 GLVLYWVVNNLLTIAQQWHINRS 286


>gi|311746146|ref|ZP_07719931.1| inner membrane protein OxaA [Algoriphagus sp. PR1]
 gi|126576367|gb|EAZ80645.1| inner membrane protein OxaA [Algoriphagus sp. PR1]
          Length = 599

 Score =  223 bits (567), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 118/601 (19%), Positives = 235/601 (39%), Gaps = 43/601 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N    + L   ++  +  F+       +       QT    +      +   +++
Sbjct: 1   MD--KNQATGLILFAAVILVYSFFFASGPEVPVEEVEAPAQTETVQDVKPAMESQAPVEN 58

Query: 61  RAQ---------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
            +                A      V L+N  +  SI+ KGA  +++ L+ Y    S   
Sbjct: 59  DSMISQANLAKFGALATLASGEEQLVTLENDLIKVSISTKGASVNEVELKEYK---SWTQ 115

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             + L+   ++K A+  E +  S   N    N +   N    +       + L     + 
Sbjct: 116 EPLLLIDSESSKMAFSLESNTGSVNLNDLYFNPSL--NSSQDEEGNAVHTLTLSAGTESG 173

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
            + +     D  Y       +   S      S +        +   +    +        
Sbjct: 174 EIIQTFTLKDGSYEVHKSLKIDRFSNYFTGNSLQFTWADQVRKQERDIGESRRKTQVNYF 233

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
             S   +     +        E   W+G S +++ +  I  +     +  +      +  
Sbjct: 234 LASDSYENLGVGDDLEQEQVAEPVKWIGFSQRFFTAGIIADETFQDVNLAQSTPADSSFV 293

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF---YFI 342
           +          +P K  T +   + G   +  +    +      FE  +D G+F   +  
Sbjct: 294 K---YMETSLSIPLKDNTASFRFYFGPDNYKGLKKVTE-----GFEKNVDMGYFFVSWVN 345

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
              +  L ++      N+G+ I+L  + +KL   PL  K YV  A M+ I+P+IDEL+EK
Sbjct: 346 KYIIVNLFAFLEKFFSNYGVIIILIVLAIKLALSPLTYKSYVGMAKMRVIKPEIDELKEK 405

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +   P ++ Q+  ++L+    ++P++GC P++LQ+P  FA++     ++++R    + W 
Sbjct: 406 YGDDPTKM-QQEQMKLFGKLGVSPISGCLPMVLQMPFLFAMFFFFPNAIQLRQES-FLWA 463

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMIL 520
            DL+  D    F L   +PFY     HV ++ ++M++S  +  K +            + 
Sbjct: 464 NDLSTYD--TFFNLPFTIPFYGS---HVSLFTLLMTVSQIVYTKFNNQLTTATGPMKNLG 518

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
             MPV+F+F L+S+PAGL  Y+  SN+++  QQAVI K+   +  +  ++  +  KN N 
Sbjct: 519 YIMPVMFMFILNSYPAGLSFYYFVSNMVTFGQQAVI-KLFVDDDKIRAKVEESKRKNANK 577

Query: 581 Q 581
           +
Sbjct: 578 K 578


>gi|307721586|ref|YP_003892726.1| membrane protein insertase, YidC/Oxa1 family [Sulfurimonas
           autotrophica DSM 16294]
 gi|306979679|gb|ADN09714.1| membrane protein insertase, YidC/Oxa1 family [Sulfurimonas
           autotrophica DSM 16294]
          Length = 534

 Score =  223 bits (567), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 127/588 (21%), Positives = 223/588 (37%), Gaps = 70/588 (11%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M  N    VA+ LS+I    +   +  P  E+   +      V             + + 
Sbjct: 5   MSPNQRLIVAVLLSIIFFVGYTAIF--PSKEQKVADNAKTDKVTSKTDTKKDVTTRVEEA 62

Query: 61  RAQALSMSPRV---------ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVT 109
              A+S   ++          +KN + I  I+  G +     L    +    + ++ ++ 
Sbjct: 63  SGHAISQQEKIAQSISNNIVTIKNKNFILKIDTLG-RMSSKELLEDKFRNTDNLHAQVI- 120

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
              PS      +      +  +           + +S K    T  +             
Sbjct: 121 ---PSTGTKPLYIRFAEDAINDEATKVPYTANVSEVSLKDKPVTVTLTQKLSALTVTKVL 177

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
              + D HY  KI            +       +  +P+ +     V    I    D + 
Sbjct: 178 TFYT-DGHYDAKIS---------TSKDVRHYIYLGDRPKVSKKLMAVAGALIYTDDDVAH 227

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
           + +       +      +        D+Y A +     + +     +   D    Y    
Sbjct: 228 IIED----GDAEGRQVFQGVKLASSFDQYTAIILYGFTKDTNIIVERGKDDNPVVYF--- 280

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
                              + G KE   +   +     P     I++GWF F AKP+F +
Sbjct: 281 ---------DARKDENIHGYIGPKEHKILKAID-----PVLTNAIEYGWFTFAAKPLFAV 326

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           +S+ + + GN+G AI+  T  ++ + +PL  K  VS   MK + PK+ EL+E   +  PQ
Sbjct: 327 LSWLHGIFGNWGWAIIALTALIRAVLYPLTYKGMVSMQKMKELAPKLKELKE-KYKKDPQ 385

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            L  A +++YK H  NPL GC P++LQIPVFFA+Y+ +  ++E++ A +  WI DL+  D
Sbjct: 386 RLNAATMEMYKKHGANPLGGCLPMILQIPVFFALYRTLLNAVELQGADWILWINDLSRMD 445

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528
           P                     + PI+M  SMFIQ +M+P    D  Q  +  ++PV+F 
Sbjct: 446 PYY-------------------VLPILMGASMFIQQRMTPNNFTDPMQEKVFKYLPVIFT 486

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
           F   +FP+GL++YW  +N+ SI QQ ++ +           +     K
Sbjct: 487 FFFVTFPSGLVLYWFTNNLFSIAQQFMVNQQFKNAKDAKVAIEKNSEK 534


>gi|325474885|gb|EGC78071.1| inner membrane protein oxaA [Treponema denticola F0402]
          Length = 582

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 118/588 (20%), Positives = 240/588 (40%), Gaps = 36/588 (6%)

Query: 4   NWNYFVAIALSVIIVYAW----QNFYV-------YPRIEEMNNERKNIQTVKQPNQVDNS 52
             N  +A+ LS+++   W    Q ++         P  +       + +   Q +    S
Sbjct: 2   KKNTVLAVVLSMLVFGGWLYIQQKYFPTEYNVPQKPVAQAQGQNPTSSEIAVQTSSNQIS 61

Query: 53  YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
            + +     +   S      ++   +      KG       L+ +     S+  +  + +
Sbjct: 62  NSMIEAVADSDYPSREQTYVIETDIIRAVFTNKGGDIISYKLKEH-ASAGSDERVEMIEN 120

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF---E 169
            +    A    L          L N          K +     IKL   + +  +F   +
Sbjct: 121 VTERNRALSLALGGHDAQAIDLLFNVKEESLSDGRKQIGFYRDIKLKNTDGSETVFTLAK 180

Query: 170 RTISLDEHYLFKIVDTVTNNSID---QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
           R   +   Y+F +  T+             S        +     +    +  + A+   
Sbjct: 181 RYTFIPGDYMFTLEVTIDGKEGMRGLSFGDSAYTLRSAPQIGPEWDKVNDKYEYRALSYF 240

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
            +  +++   I        ++  SW+ +S KY++ + IP              +G   + 
Sbjct: 241 ANEKKKEDRSITDGKTKAVNDLASWVSVSGKYFSFIIIPKDPIQKMFFSGIKEEGAKLHN 300

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY----EKDLAIPRF---EMLIDWGWF 339
           ++F  +   I+ G +      ++ G      ++ Y      +          +    G+ 
Sbjct: 301 SQFFISRQPIV-GNAAYDQYRVYIGPSSEKILNSYNSAAANNYGYENLRIDSLAASSGFL 359

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             + + +  +M  FY ++ N+G+A++L T+ ++++FFPL KK   +T  M+ +QP+I+EL
Sbjct: 360 APLERVLKFVMEIFYKIIPNWGVALLLLTLLMRIIFFPLTKKSSEATKRMQELQPQINEL 419

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           ++K+K +P Q L   M++ YK    NP +GC P+L+Q+P  FA++ + +   E R A F 
Sbjct: 420 QQKYKNNP-QKLNAEMVKFYKEAGYNPASGCLPLLIQLPFLFAMFGLFNNYFEFRGASFI 478

Query: 460 -GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ-- 516
            GWI DL+  D  +I      +PF    +  + + PII + S  +  K++  P    Q  
Sbjct: 479 PGWIPDLSVGD--SILKFGFTIPFL--NWTDLRLLPIIYTASQLLHGKLTQTPGQSQQNP 534

Query: 517 -AMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
              I+  +MP+ F F   + P+GL+++W++SN++ ++QQ +I K    
Sbjct: 535 SMKIMIYFMPLFFFFLFYNAPSGLLLFWTFSNILMLLQQLIINKSMKK 582


>gi|225849760|ref|YP_002729994.1| inner membrane protein OxaA [Persephonella marina EX-H1]
 gi|225644791|gb|ACO02977.1| inner membrane protein OxaA [Persephonella marina EX-H1]
          Length = 537

 Score =  222 bits (566), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 120/584 (20%), Positives = 232/584 (39%), Gaps = 84/584 (14%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           E     F+      +++ A+     Y+YP        +K  + V+   ++         +
Sbjct: 7   EMQKRMFIFFIAVAVLLIAYSIISSYLYPTEPSPEKNQKTQEVVEVKEEIKEQRKVPEPE 66

Query: 60  DRA-----------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
           +R                   A ++   V +        I+  GA+   + +  +  D+ 
Sbjct: 67  ERITYKQTGDYDLLLDKRRINADNLKDTVRINTDFGYIEISKIGARIVSIYVEKFKTDMI 126

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
           S+         S T   +  E+   S      +  S   +     +++            
Sbjct: 127 SD--------FSKTNRLFPTEIITTSPELTALINFSPYSFRQEGDRLIFELKQ------- 171

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
             +I   +   +++     +          +        ++      A +      G I 
Sbjct: 172 -GDISVRKIFEVNKDSTLSLKI------DTEGLEKYGLSVINGISLKAESRAFGHSGAI- 223

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
               K+  E    D +            W G  +KY+  +       S            
Sbjct: 224 ---IKTDKELIKLDADIDKKQTIRGHILWAGEENKYFLQMLAVKGGFSAT---------- 270

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIP-RFEMLIDWG 337
             +    +  +  +      +   F F G K +  +      Y+K+  I       ID+G
Sbjct: 271 --HVVPIAEEKTVVFSEIPTSVEGFFFGGPKLYSLLGDITEKYKKEWNIDLSLRESIDFG 328

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +F  + KP+F++M + Y+ + N+G+ I++ TV ++++ FPL  K   +   M ++ P+I 
Sbjct: 329 FFGILGKPLFLIMHFIYDYIHNWGLTIIILTVLLRIVLFPLNHKSLKAMKKMADLAPEIK 388

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L++K+++  PQ LQ+ M++LY  H  NP++GC PI+ QIP+F A+Y V+ +++E++  P
Sbjct: 389 KLQKKYQK-DPQKLQEEMMKLYAEHGTNPMSGCLPIVAQIPIFIALYNVLMVTVELKMVP 447

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + W++DLA  DP                     I PI+M +SM  Q  ++P   DK Q 
Sbjct: 448 -FLWVQDLADKDPYY-------------------ILPILMGVSMIAQQWITPSS-DKNQK 486

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           +I+  M  VF F   +FPAGL++YW  +N++ I Q  ++ K  G
Sbjct: 487 IIMYIMAFVFTFLFMNFPAGLVLYWLTNNILGIGQSFIVNKQMG 530


>gi|255009561|ref|ZP_05281687.1| putative inner membrane protein translocase component YidC
           [Bacteroides fragilis 3_1_12]
 gi|313147337|ref|ZP_07809530.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136104|gb|EFR53464.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 618

 Score =  222 bits (566), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 97/600 (16%), Positives = 225/600 (37%), Gaps = 48/600 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49
           M+   N    + L  I++  +         +            +  +++     K    +
Sbjct: 1   MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKRYYDSIAVVQQQEEALKAKTEAAL 58

Query: 50  DNSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
            N       D  +              ++N  +  +++ KG +     L+ Y   +  + 
Sbjct: 59  ANEKEETAADSASLFFNATQGKEAFTTIQNNLVEITLDNKGGRVYSALLKNY---MGQDK 115

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             V L + S+    +           N +       +   +      +  ++L   +A+ 
Sbjct: 116 KPVVLFNGSDASMNFNFY--------NKKGALQTKDFYFEAVNKTDSSVTMRLAADSASY 167

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           I F  T+  D + +  ++             +        + +     +  +     +  
Sbjct: 168 IDFIYTLKPDNYLMSFVIKATGMEGKLAATTNYVDISWSQRARQIEKGYTYENRLADLTY 227

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
             +  +       K    +  E   W+   +++++SVFI  ++    +    +    + Y
Sbjct: 228 KYTGDDVDNLSASKDDEKSVPERLDWIAFKNQFFSSVFIAEQDFEKTTVRSKMEKQGSGY 287

Query: 286 QAKFSANE-ITILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGWFY 340
              +SA       P     T  + + G   + T+       E+   +     L      +
Sbjct: 288 IKDYSAEMSTFFDPTGKQPTDMYFYFGPNHYKTLTALDKGREEKWELNNLVYLGWPLIRW 347

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   +  +        G+ ++L T+ VK++ FP   K Y+S+A M+ ++PKIDE+ 
Sbjct: 348 INKWITINVFDWLSGWGLGMGVVLLLLTIMVKVVVFPATWKTYMSSAKMRVLKPKIDEIN 407

Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +K+ +       Q+ ++ LY  + ++P+ GC P+L+Q P+  A++  +  ++E+R    +
Sbjct: 408 KKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLVQFPILMALFMFVPSAIELRQQS-F 466

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD------ 513
            W  DL+  D     T    +PF      H+ ++ ++M+++  +  K +    D      
Sbjct: 467 LWADDLSTYD--AFITFPFHIPFLGN---HLSLFCLLMTITNILNTKYTMQQQDTGAQPQ 521

Query: 514 -KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
                 ++  MP++F+F L+ +P+GL  Y+  S +IS+V   +I++    E  L+  L +
Sbjct: 522 MAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFISTLISVV-TMIILRRTTDEDKLLADLEA 580


>gi|319902327|ref|YP_004162055.1| protein translocase subunit yidC [Bacteroides helcogenes P 36-108]
 gi|319417358|gb|ADV44469.1| protein translocase subunit yidC [Bacteroides helcogenes P 36-108]
          Length = 615

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 109/601 (18%), Positives = 221/601 (36%), Gaps = 47/601 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-----RKNIQTVKQPNQVDNSYAA 55
           M+   N    + L  I++  +       + +    +        +Q  +   +  +  A 
Sbjct: 1   MD--KNTITGLVLIAILLVGFSFLSRPSKEQLDAQQRYYDSIAQVQQREADLKAKSEVAL 58

Query: 56  VLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
               ++    S S            + ++N  +  SI  KG       L+ Y        
Sbjct: 59  ANEGEKKTVDSTSLFFNARQGADSLITIQNNLVALSICTKGGSIFSATLKEY--MGQDKK 116

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             VTL +  +    +           N +       +          T  ++L   +A+ 
Sbjct: 117 TPVTLFNGDDVSMNFLFY--------NKKETIQTGDYYFNEVDRTDSTVAMRLSADSASY 168

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           I F   +  D + +   +  V          +        +       +  +     +  
Sbjct: 169 IDFTYAMHNDTYLIDFTIHAVNMEGKLAATNNYVDIEWAQRAHQIEKGYTYENRLSELTY 228

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
            K      Y    K+      E   W+   +++++SVF+   +         +    + Y
Sbjct: 229 KKMGEGTDYLSANKNDEKEIPEHLDWIAFKNQFFSSVFLADADFEKTKLVSKMEPQGSGY 288

Query: 286 QAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWGWFY 340
              +SA   T   P     T  + + G   + T+   +K       + R   L       
Sbjct: 289 IKDYSAEMSTKFDPTGKEATQLYFYFGPNHYKTLTALDKGREEKWELNRLVYLGWPIVRQ 348

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   +  +        GI ++L T+ VK++ FP   K Y+S+A M+ ++PKIDE+ 
Sbjct: 349 INQWFTINIFDWLSGWGLGMGIVLLLMTLIVKVVVFPATWKTYMSSAKMRVLKPKIDEIN 408

Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +K+ +       Q+ ++ LY  + ++P+ GC P+L+Q P+  A++  +  ++E+R    +
Sbjct: 409 KKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS-F 467

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQ 516
            W  DL+  D          +PF      H+ ++ ++M+++  +  K      D     Q
Sbjct: 468 LWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKYMMQQQDTGANPQ 522

Query: 517 AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
              + WM    PV+F+F L+ +P+GL  Y+  S +IS+V   +IM+    E  L+ +L S
Sbjct: 523 MAAMKWMSYLMPVMFLFILNDYPSGLNYYYFISTLISVV-TTIIMRKTTNEEKLLAQLES 581

Query: 573 T 573
            
Sbjct: 582 N 582


>gi|188996900|ref|YP_001931151.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931967|gb|ACD66597.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 515

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 118/571 (20%), Positives = 230/571 (40%), Gaps = 70/571 (12%)

Query: 2   ERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQP-NQVDNSYAAV 56
           +    + +      +++ ++    Q F+      + N  ++  + V  P  Q+  SY  V
Sbjct: 5   DMQKRFMIFFGAVALLLISFSLISQYFFKDSTQNQKNQTQQTQREVAAPIKQISGSYDLV 64

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
           L  +R    ++   V +K        +  G +        Y++D+          S SN 
Sbjct: 65  LTGERVNTDNLKDLVRIKTKEGYIEFSNIGGRIVSAFDNRYNVDIIPE------FSKSNK 118

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
                     ++T   +            S           L +    N+  E+T ++++
Sbjct: 119 VFPGEIITTDINTTKLLNF----------SKYESKIQDNKILFYLKNENVEVEKTYTIND 168

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
                +           + +     +                         +  E    +
Sbjct: 169 DNTITVDIKTKGLENVGLAYLTGITLKSEGTFGHNGPIIK-----------TDKEIIKIN 217

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
            + ++I    +   W G  +KY+  +                   +  Y    + +   +
Sbjct: 218 NDINTIQTIRDKILWAGQENKYFMQIL------------SIKGGINTVYIVPVAKDTTVV 265

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-----RFEMLIDWGWFYFIAKPMFMLMS 351
           L     +   F + G K +  +                    +D+G+F  + KP+F+L+ 
Sbjct: 266 LSEIPASFEGFNYLGPKLYSLLGEITDKYQKLWNVDLNLRSSVDFGFFGILGKPLFLLLH 325

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
           + Y+ V N+G+AI++ TV ++L+ FPL  K   +   M ++ P++++L++K+ +  PQ L
Sbjct: 326 FIYDFVHNWGLAIIVLTVLLRLVLFPLNHKSLKAMKKMADLAPEMEKLKKKYAK-DPQKL 384

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
           Q+ +++LY     NP++GC PIL QIP+F A+Y V+ +++E+++APF  WIKDL+  DP 
Sbjct: 385 QEEIMKLYAEAGANPMSGCLPILAQIPIFIALYNVLMVTVELKNAPFMLWIKDLSDKDPY 444

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531
                               + PI+M LSM  Q  ++P   DK Q MI+  M  VF F  
Sbjct: 445 Y-------------------VLPILMGLSMVAQQFITPSS-DKNQRMIMYIMAGVFTFMF 484

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            +FP+GL++YW  +N++ ++Q  +I K    
Sbjct: 485 MNFPSGLVLYWLTNNILGLIQSVIINKSMKK 515


>gi|320536044|ref|ZP_08036102.1| membrane protein insertase, YidC/Oxa1 family protein [Treponema
           phagedenis F0421]
 gi|320147094|gb|EFW38652.1| membrane protein insertase, YidC/Oxa1 family protein [Treponema
           phagedenis F0421]
          Length = 609

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 130/615 (21%), Positives = 248/615 (40%), Gaps = 45/615 (7%)

Query: 4   NWNYFVAIALSVIIVYAWQNF----YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI- 58
             N  +AI LS +++          Y  P  EE    +             N++ A    
Sbjct: 2   KKNTLIAIILSTLVIIGSTYLQLKLYPPPAQEEQQPAQSEKSVQSTETVPQNTFVAETEL 61

Query: 59  -------------DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
                         D            +K   +  S   KG       L  ++    S  
Sbjct: 62  GSKSAGGVEFLSNPDSDDQNLTEKIYTVKTSLVEASFTNKGGDIISYKLLEHYGA-DSTE 120

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
            +  + + + +  A+   L   +     +L +          + +     I +  ++A+ 
Sbjct: 121 NVEMIKNLTESNRAFSIALGNQTAPIVDQLFHVKEEKLSGGAQAIGFYKTISIRNQDASI 180

Query: 166 ILF---ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG---VQEG 219
             F   +R I   ++Y+F++  ++  +   +             P      +      E 
Sbjct: 181 SSFILAKRYIFYPDNYMFELQVSINGDESLKGLNFNSAGYTLKTPPQIGPDWNTADKYEY 240

Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK-YL 278
              +   K   + K   ++  S+    +   W+ IS KY+ ++ IP    +  S F    
Sbjct: 241 RTFMSFSKEKEKTKSYTLKTDSVQEITDPVGWVSISGKYFTTIVIPQDSNTIQSTFLLAP 300

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
            +  +  Q    A    I+ G +I     ++ G      +  Y      P     I    
Sbjct: 301 KNAQSPIQDNQIALIRKIIAGSAIIDIYHVYIGPCTENYLSPYNIPSKNPFQLDNIRIDS 360

Query: 339 F-------YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
                   Y +   +  ++ +FY ++ N+G+AI+L T+ +KLLF+PL KK +V++  M+ 
Sbjct: 361 VAASGGLLYPLEVGLKWVLQFFYKIIPNWGVAIILVTLLIKLLFYPLTKKSFVASQRMQE 420

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +QP++  ++ K+K +P Q L + M + YK    NPL+GC  +L+Q+P  FA+Y++ +   
Sbjct: 421 LQPQMQTIQAKYKNNP-QKLNEEMAKFYKEAGYNPLSGCLTLLVQMPFLFAMYRLFNNYF 479

Query: 452 EMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           E R A F   WI DL+  D  +I+ L   +PF+  G+  + + PI+  +S  +  K++ P
Sbjct: 480 EFRGAMFIPHWIPDLSIGD--SIWKLPFTVPFF--GWTDLRLLPILYVVSQIVFSKITQP 535

Query: 511 PADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           PA + Q     M+L +MPV F F   + P+GL++YW+  N++++VQQ  I          
Sbjct: 536 PATEQQNSSMKMMLYFMPVFFFFLFYNAPSGLLVYWTAMNLMTLVQQLFI--KQTMHHTS 593

Query: 567 IDRLRSTFSKNYNSQ 581
             + +        ++
Sbjct: 594 DAKNKKEVKYGKGAK 608


>gi|225873712|ref|YP_002755171.1| membrane protein [Acidobacterium capsulatum ATCC 51196]
 gi|225792406|gb|ACO32496.1| membrane protein [Acidobacterium capsulatum ATCC 51196]
          Length = 605

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 109/585 (18%), Positives = 217/585 (37%), Gaps = 55/585 (9%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP-----------NQVDN 51
            +    +   + + I    Q F          N +      K              Q  +
Sbjct: 15  DSRTLLIYAVIFLAIFLGLQYFRSKNAPPAPPNGKHTPAAQKNSPAPSAAPASAPGQTAS 74

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
             A       A   +      +++P    +   +G       L+ Y     + +  + ++
Sbjct: 75  GNAPAAATTPAVLAAAETTTTVESPLYRVTFTNRGGVAKSWILKKY--TNDAQNRPLDMV 132

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           +    +  +   L   +    +    +  ++   +   +     +   +     +  E+T
Sbjct: 133 NDKAAQQ-FGYPLSLYTYDAALTQQLNQAMYVPSATGTIQAPATLTFRYSANG-LTVEKT 190

Query: 172 ISLDEHYLFKIVDTVTNNSI--DQIRFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGDK 227
              ++ Y+ +    VT N      +   P G   +       N    QE           
Sbjct: 191 FRFEKSYVLETDVKVTRNGAPVTALLAWPSGFGDQETLPQYQNAQIDQETGAKTGFHLAG 250

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
               ++    + S          + G+SD Y+AS+F+P    +      + +    R  A
Sbjct: 251 GPNVKQIEPKKVSGGDTVQGPLDYAGVSDLYFASIFLPPNPDNALMVTLHHALELPRDPA 310

Query: 288 KFSANEITILP-------GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
               +++  +P         +    + LF G K    +            E ++ +G++ 
Sbjct: 311 HPKTSKMDQVPVLGAAVGSTTGEVHDRLFVGPKALDVLKSIHTAYHF-NLEGIVHYGFWG 369

Query: 341 FIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +IAKPMF+++ +F+N  + N+G AI+L T+ +     P        +  M  IQP++D +
Sbjct: 370 WIAKPMFLVLQFFHNHGIPNWGWAILLLTLILNAAMMPTRVTMMKKSLAMMRIQPQMDAI 429

Query: 400 REKF-----KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           + K+          Q + K M+ L K   IN  AGC P+LLQ P+    Y+++ +++ +R
Sbjct: 430 KAKYAKYKATDPRKQEMNKEMMDLQKREGINMFAGCLPMLLQYPLLIGFYRMLEVTIALR 489

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-D 513
           HA +  W+ DL+A DP                     I PI + +SMF+    +P P  D
Sbjct: 490 HAHWM-WLPDLSAPDPYY-------------------ILPIFVVVSMFLVQFFTPSPGVD 529

Query: 514 KGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             Q  ++ + MP  F F +    +G+ +YW+  N++ + QQ V+ 
Sbjct: 530 PAQQRMMAFMMPAFFGFMMLHIGSGVALYWAGGNILGVGQQWVMN 574


>gi|313205343|ref|YP_004044000.1| protein translocase subunit yidc [Paludibacter propionicigenes WB4]
 gi|312444659|gb|ADQ81015.1| protein translocase subunit yidC [Paludibacter propionicigenes WB4]
          Length = 632

 Score =  221 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 120/614 (19%), Positives = 241/614 (39%), Gaps = 42/614 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE---------RKNIQTVKQPNQVDN 51
           M+   N      L  +IV  +         E    +         +++   V      + 
Sbjct: 1   MD--KNTIFGFVLIAVIVLGYMQITKPSEKEIAAQKRYNDSIALVQQSKAHVAVKTISET 58

Query: 52  SYAAVLIDDRAQALS-----------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
              +V  +D                       L+N  +  ++  KG +   + L+ Y   
Sbjct: 59  VSDSVAANDTTNNSGAFGDFSVASKGEEKFYTLENELVKITLGSKGGRIYSVQLKKYSKR 118

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
            S N+    +L      N  F  +   +   N        V  +        T  ++L  
Sbjct: 119 DSLNNAHPLILFKEKDSNLGFTFVTNNNRVINSSNLYFEPVSGITKDAKGNQTLILRLKT 178

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
                I F  T+  +++ L   +     N+I     +        K          ++ +
Sbjct: 179 TGQAYIDFAYTLPANDYMLGFGIKAKDMNTIMPTGTNSLDMAWTSKIPQQEKGRKFEDRY 238

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
            ++       + +     K+          W+   D++++S+ I ++  +  +    L  
Sbjct: 239 SSIEYKYVADDVEKLSESKNDEKKLTNKVKWIAFKDQFFSSILIANEALNSTTLKSTLEG 298

Query: 281 GHARYQAKFSANE-ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
            ++ Y   + AN  +   P   + TT   + G   + T+  Y+KD        L      
Sbjct: 299 ENSGYLKTYDANMSVAFDPTGKVPTTFRWYFGPNHYKTLTAYDKDAKDGHELTLNKLIPL 358

Query: 340 YFIAKP------MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
            +          +  + ++F   + NFG+ I+L T+ +KL+ FPL  K Y+S+A M+ ++
Sbjct: 359 GWGIFGWVNRFAIIPMFNFFNKFISNFGLIILLLTLVIKLVLFPLTYKSYMSSAKMRVLK 418

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P+IDE+  +     P   QKA ++LY    ++P++GC P LLQ+P+ FA++     ++E+
Sbjct: 419 PEIDEINARIPADKPAERQKATMELYGKVGVSPMSGCIPSLLQMPILFAMFSFFPAAIEL 478

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510
           R    + W  DL+A D  +I TL   +PF      HV ++ ++M+ +  +  K++     
Sbjct: 479 RQQS-FLWATDLSAYD--SIMTLPFTVPFGFGN--HVSLFCLLMTATNIVYTKLNMANQS 533

Query: 511 ----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
               P       ++  MPV+F+F  +++ +GL  Y+  + +ISI+Q  VI +    E  +
Sbjct: 534 TTDQPGGAVMKWMMYLMPVMFLFIFNNYASGLSYYYFIATLISIIQTYVI-RGFVDEKKI 592

Query: 567 IDRLRSTFSKNYNS 580
           + +L +  + N   
Sbjct: 593 LAQLHAKRASNSKK 606


>gi|329961447|ref|ZP_08299552.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Bacteroides fluxus YIT 12057]
 gi|328531795|gb|EGF58621.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Bacteroides fluxus YIT 12057]
          Length = 616

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 108/602 (17%), Positives = 225/602 (37%), Gaps = 49/602 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N    + L  I++  +  F   P  E++  +++   ++ Q  Q + +  A     
Sbjct: 1   MD--KNTITGLVLIAILLVGFS-FLSRPSQEQLEAQQRYYDSIAQVQQREEALKAKSEAA 57

Query: 61  RAQALSM----------------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
            A                     +  V ++N      ++ KG +     L+ Y       
Sbjct: 58  LANEKETGVVDSTALFFEARKGTASLVTIQNNLAEIKVDTKGGRIASATLKEY--MGQDK 115

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
           +  VTL S  +    +           N +           +      T  ++L   +A+
Sbjct: 116 TTPVTLFSGDDASMNFLFY--------NKKETIQTEDLYFTAVNRTDSTVTMRLSADSAS 167

Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
            I F  T+  D + +   +  V          +        + +     +  +     + 
Sbjct: 168 YIDFTYTMHNDTYLVDFTIRAVNMEGKLAATNNYVDIEWAQRARQIEKGYTYENRLSELT 227

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
              +     Y     +          W+   +++++SVF+   +         +    + 
Sbjct: 228 YKMTGEGTDYLSANNNDEKEISGRLDWIAFKNQFFSSVFLADADFEKAKIASKMEPQGSG 287

Query: 285 YQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGWF 339
           Y   +SA   T   P     T  F + G   + T+       ++   + R   L      
Sbjct: 288 YIKDYSAEMSTRFDPTGKEATQLFFYFGPNHYKTLTALDKGRDEKWELNRLVYLGWPVVR 347

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
                    +  +        GI ++L T+ VK + FP   K Y+S+A M+ ++PKIDE+
Sbjct: 348 QINQWFTINIFDWLSGWGLGMGIVLLLMTLIVKAVVFPATWKTYMSSAKMRVLKPKIDEI 407

Query: 400 REKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
            +K+ +       Q+ ++ LY  + ++P+ GC P+L+Q P+  A++  +  ++E+R    
Sbjct: 408 NKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS- 466

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KG 515
           + W  DL+  D          +PF      H+ ++ ++M+++  +  K      D     
Sbjct: 467 FLWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKYMMQQQDTGANP 521

Query: 516 QAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
           Q   + WM    P++F+F L+ +P+GL  Y+  S +IS+V   +IM+    E  L+ +L 
Sbjct: 522 QMAAMKWMSYLMPIMFLFVLNDYPSGLNYYYFISTLISVV-TTLIMRKTTNEEQLLAQLE 580

Query: 572 ST 573
           + 
Sbjct: 581 AN 582


>gi|313681706|ref|YP_004059444.1| protein translocase subunit yidc [Sulfuricurvum kujiense DSM 16994]
 gi|313154566|gb|ADR33244.1| protein translocase subunit yidC [Sulfuricurvum kujiense DSM 16994]
          Length = 536

 Score =  220 bits (560), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 124/562 (22%), Positives = 226/562 (40%), Gaps = 58/562 (10%)

Query: 4   NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
           N    VA+ALS I    +   +         N      +     Q + S    + D ++ 
Sbjct: 8   NQRLLVAVALSFIFFIGYTTIFPPKASNLEANTTNTAVSTVAAAQPETSAKEAVTDTQSA 67

Query: 64  ALSMSPRVE----LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
           +   +   +    + +      I+  G +   + L         +  +  L+S    K  
Sbjct: 68  SEVQTTATDTLTTVNSKEFTLKIDTLG-RISSVILSN-KKHNGKDGKLAELVSSVGAKPL 125

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           Y    D    A   + P S+ + N+  G+       +         +   +T++      
Sbjct: 126 YIRFADEALNAAASKTPYSSDLNNITLGENGKAVVTLTQNLPE---LTVTKTLTFYTDGH 182

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           +     ++N     +      +++              +    +  DK +  +       
Sbjct: 183 YDAKIALSNEKRYFVYLGQHPQVIEQMMTVVGGMIYSGDNLTTIFEDKDVEGRS------ 236

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
                      +    D+Y+AS+     + +     +        Y              
Sbjct: 237 -----IFTDVHFASSFDQYYASIIYGFSKETQVYVDRDAQSNPVTYLEG----------- 280

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359
            +   T   + G KE  T+         P     I++GWF F+A P+F ++ + + L+GN
Sbjct: 281 -TNNFTFNGYIGPKEHKTLEAIN-----PVLTNAIEYGWFTFVAAPIFKILMWLHGLLGN 334

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +G +I+  T+ +++  +PL  K  VS   +K I P+I E++EK+K  P   +  A++++Y
Sbjct: 335 WGWSIIALTIIIRIFLYPLTHKGMVSMQKIKEIAPRIKEVQEKYKGDPA-RMNAAVMEMY 393

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           K H  NPL GC P+LLQIPVFFAIY+V+  ++E++ A +  W+ DL+  DP         
Sbjct: 394 KKHGANPLGGCLPLLLQIPVFFAIYRVLLNAVELQGAEWVMWVHDLSRMDPYY------- 446

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538
                       I PI+M  +M+ Q K++P    D  Q  I  ++PV+F F   +FPAGL
Sbjct: 447 ------------ILPILMGATMYYQQKITPSNFTDPLQEKIFKFLPVIFTFFFFTFPAGL 494

Query: 539 IIYWSWSNVISIVQQAVIMKMH 560
           ++YW  +N+ SI QQ ++ K  
Sbjct: 495 VLYWFVNNIFSIAQQYLVNKQF 516


>gi|89891424|ref|ZP_01202930.1| 60 Kd inner-membrane protein [Flavobacteria bacterium BBFL7]
 gi|89516455|gb|EAS19116.1| 60 Kd inner-membrane protein [Flavobacteria bacterium BBFL7]
          Length = 610

 Score =  220 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 115/585 (19%), Positives = 222/585 (37%), Gaps = 38/585 (6%)

Query: 1   MERN---WNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53
           ME+    W   V + L  II+  W    Q                   T  Q    +N  
Sbjct: 1   MEQKSIDWKSIVGMGLIFIILMYWFSQNQADVEANPETTTETSAATQDTTPQLTS-NNEP 59

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
           AA  I +       +  +  +N  +   I+ KGA   +  L+ Y      +S  V L  P
Sbjct: 60  AAAPISNGVFQAGSNEVITFENDLIQFKIDSKGALIQEALLKSYKT---YDSLPVYLAKP 116

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
           +   +    +LD V   N+    ++  +    S  +      +        +   E    
Sbjct: 117 NEKDH----QLDLVFVTNDGRKMHTKDMSFTPSQSMNGENKVLSFKANVGPSQFLEFRYE 172

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
           L            +         +   ++         +     E     +  +      
Sbjct: 173 LQPKNYMMDFTIRSQGLSQTFNTADAPQLNWEMLAYKRSKGMDNENRYTEIKFEYGDGSD 232

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK----YLSDGHARYQAKF 289
               + +      +  S++     ++ S+ +                   D    Y  KF
Sbjct: 233 DYTGQGAEADEEEDKVSYIAYKQHFFTSILLTDTPFKKAKLISENIASQDDEQDTYTKKF 292

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA-IPRFEMLIDWGWFYFIAKPMFM 348
           ++       G  +      + G  ++  +  YE++L  +      I      F+ +P+F 
Sbjct: 293 NSQIELEYTGGELAYNMDWYFGPTDYDILDGYERNLDEVVDLGWGIFGWINEFVIRPLFS 352

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+    N    +GIAI+L T+ V+++  P+  K Y++ A MK ++P+++ + EK+K +  
Sbjct: 353 LL--TKNAGIPYGIAIILLTICVRIILSPVLYKSYMTQAKMKILRPELNRIAEKYKDNAM 410

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           +  Q+  +++      +PL+GC P LLQ+PVFFA++K    + ++R    + W  DL++ 
Sbjct: 411 KK-QQETMRIQSEAGASPLSGCLPGLLQMPVFFALFKFFPTAFDLRQKS-FLWADDLSSY 468

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS--------PPPADKGQAMIL 520
           D   IF L   +PFY     HV ++PI+ S+++F  M+M+          P       I+
Sbjct: 469 D--EIFKLPFNIPFYG---DHVSLFPILASIAIFFYMQMTTGQTMQNTQQPGMPNMKFIM 523

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
              P+  +   +++ +GL +Y+  SN+I+I    VI K    +  
Sbjct: 524 YLSPLFMLVFFNNYASGLSLYYFVSNLITIGIMLVI-KNFVIKEE 567


>gi|317479120|ref|ZP_07938260.1| YidC/Oxa1 family membrane protein insertase [Bacteroides sp.
           4_1_36]
 gi|316904692|gb|EFV26506.1| YidC/Oxa1 family membrane protein insertase [Bacteroides sp.
           4_1_36]
          Length = 617

 Score =  220 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 109/603 (18%), Positives = 233/603 (38%), Gaps = 50/603 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51
           M+   N    + L  I++  +  F   P  E++  +++   ++ Q  Q +          
Sbjct: 1   MD--KNTITGLVLIAILLVGFS-FLSRPSQEQLEAQQRYYDSIAQVQQREADLKAKAEAA 57

Query: 52  ----SYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
               S A   +D  A         + +V ++N     +++ KG +     L+ Y      
Sbjct: 58  LANESGAEASVDSTALFFDARQGTNSQVTIQNNLAEITVDTKGGRIASATLKEY--MGQD 115

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
            +  VTL S ++    +           N +       +   +      T  ++L   + 
Sbjct: 116 KTTPVTLFSGNDASMNFLFY--------NKKETIQTEDYYFTAVNRTDSTVTMRLSADSN 167

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
           + I F   +  D + +   +  V          +        + +     +  +     +
Sbjct: 168 SYIDFTYRMHNDTYLIDFTIQAVNMEGKLAATNNYVDIEWSQRARQIEKGYTYENRLAEL 227

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
               +     Y    K+      E   W+   +++++SVF+   +         +    +
Sbjct: 228 TYKITGEGTDYLSANKNDEKEVPERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQGS 287

Query: 284 RYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGW 338
            Y   +SA   T   P     T  F + G   + T+       ++   + R   L     
Sbjct: 288 GYIKDYSAEMSTKFDPAGKEPTQLFFYFGPNHYKTLTALDKGRDEKWELNRLVYLGWPLI 347

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +        +  +  +   + GI ++  T+ VK + FP   K Y+S+A M+ ++PKIDE
Sbjct: 348 RWINKWFTINIFDWLSSWGLSMGIVLLFMTLIVKAVVFPATWKTYMSSAKMRVLKPKIDE 407

Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           + +K+ +       Q+ ++ LY  + ++P+ GC P+L+Q P+  A++  +  ++E+R   
Sbjct: 408 INKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS 467

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---K 514
            + W  DL+  D          +PF      H+ ++ ++M+++  +  K      D    
Sbjct: 468 -FLWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKYMMQQQDTGAN 521

Query: 515 GQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
            Q   + WM    P++F+F L+ +P+GL  Y+  S +IS+V   +IM+    E  L+ +L
Sbjct: 522 PQMAAMKWMSYLMPIMFLFILNDYPSGLNYYYFISTLISVV-TTLIMRKTTNEEALLAQL 580

Query: 571 RST 573
            + 
Sbjct: 581 EAN 583


>gi|167762902|ref|ZP_02435029.1| hypothetical protein BACSTE_01266 [Bacteroides stercoris ATCC
           43183]
 gi|167699242|gb|EDS15821.1| hypothetical protein BACSTE_01266 [Bacteroides stercoris ATCC
           43183]
          Length = 615

 Score =  219 bits (558), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 110/609 (18%), Positives = 229/609 (37%), Gaps = 48/609 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER---KNIQTVKQPNQVDNSYAAVL 57
           M+   N    + L  I++  +       + +    +R      Q  ++   +     A L
Sbjct: 1   MD--KNTITGLVLIAILLVGFSFLSRPSKEQLAAQQRYYDSIAQVQQREADLKAKAEAAL 58

Query: 58  IDDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
            +D+ +  + S             +V ++N     ++  KG +     L+ Y        
Sbjct: 59  ANDKEEQTADSTALFFNALQGTDSQVTIQNNLAELTVATKGGRISSATLKEY--MGQDKK 116

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             VTL S ++    +           N +       +          T  ++L   +A+ 
Sbjct: 117 TPVTLFSGNDASMNFLFY--------NKKETIQTENYYFSVVNRTDSTVTMRLAADSASY 168

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           I F+  +  ++ YL          +               + +     +  +     +  
Sbjct: 169 IDFKYAMH-NDTYLVDFTIDAVGMANKLANTDYVDIEWSQRARQIEKGYTYENRLAELTY 227

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
             +     Y    K+      E   W+   +++++SVF+             L    + Y
Sbjct: 228 KITGDGTDYLSAGKNDEKEVAERLDWIAFKNQFFSSVFLADANFEKTKLNSKLETQGSGY 287

Query: 286 QAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWGWFY 340
              +SA   T   P     T  F + G   + T+   +K       + R   L      +
Sbjct: 288 IKDYSAEMSTAFDPTGKTPTQLFFYFGPNHYKTLTALDKGRENKWELNRLVYLGWPLIRW 347

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   +  +  +   + GI ++L T+ VK + FP   K Y+S+A M+ ++PKIDE+ 
Sbjct: 348 INKWFTINIFDWLSSWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKPKIDEIG 407

Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +K+ +       Q+ ++ LY  + ++P+ GC P+L+Q P+  A++  +  ++E+R    +
Sbjct: 408 KKYPKQEDAMKKQQEVMALYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS-F 466

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQ 516
            W  DL+  D          +PF      H+ ++ ++M+++  +  K      D     Q
Sbjct: 467 LWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKFMMQQQDTGANPQ 521

Query: 517 AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
              + WM    PV+F+F L+ +P+GL  Y+  S ++S+V   +IM+    E  L+ +L +
Sbjct: 522 MAAMKWMSYLMPVMFLFILNDYPSGLNYYYFISTLVSVV-TTIIMRKMTNEEALLAQLEA 580

Query: 573 TFSKNYNSQ 581
                   +
Sbjct: 581 NRKDPKKMK 589


>gi|160890337|ref|ZP_02071340.1| hypothetical protein BACUNI_02778 [Bacteroides uniformis ATCC 8492]
 gi|156860069|gb|EDO53500.1| hypothetical protein BACUNI_02778 [Bacteroides uniformis ATCC 8492]
          Length = 617

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 108/603 (17%), Positives = 233/603 (38%), Gaps = 50/603 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51
           M+   N    + L  I++  +  F   P  E++  +++   ++ Q  Q +          
Sbjct: 1   MD--KNTITGLVLIAILLVGFS-FLSRPSQEQLEAQQRYYDSIAQVQQREADLKAKAEAA 57

Query: 52  ----SYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
               S A   +D  A         + +V ++N     +++ KG +     L+ Y      
Sbjct: 58  LANESGAEASVDSTALFFDARQGTNSQVTIQNNLAEITVDTKGGRIASATLKEY--MGQD 115

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
            +  VTL S ++    +           N +       +   +      T  ++L   + 
Sbjct: 116 KTTPVTLFSGNDASMNFLFY--------NKKETIQTEDYYFTAVNRTDSTVTMRLSADSN 167

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
           + I F   +  D + +   +  V          +        + +     +  +     +
Sbjct: 168 SYIDFTYRMHNDTYLIDFTIQAVNMEGKLAATNNYVDIEWSQRARQIEKGYTYENRLAEL 227

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
               +     Y    K+      E   W+   +++++SVF+   +         +    +
Sbjct: 228 TYKITGEGTDYLSANKNDEKEVPERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQGS 287

Query: 284 RYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGW 338
            Y   +SA   T   P     T  F + G   + T+       ++   + R   L     
Sbjct: 288 GYIKDYSAEMSTKFDPAGKEPTQLFFYFGPNHYKTLTALDKGRDEKWELNRLVYLGWPLI 347

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +        +  +  +   + GI ++  T+ VK + FP   K Y+S+A M+ ++PKIDE
Sbjct: 348 RWINKWFTINIFDWLSSWGLSMGIVLLFMTLIVKAVVFPATWKTYMSSAKMRVLKPKIDE 407

Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           + +K+ +       Q+ ++ LY  + ++P+ GC P+L+Q P+  A++  +  ++E+R   
Sbjct: 408 INKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS 467

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---K 514
            + W  DL+  D          +PF      H+ ++ ++M+++  +  K      D    
Sbjct: 468 -FLWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKYMMQQQDTGAN 521

Query: 515 GQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
            Q   + WM    P++F+F L+ +P+GL  Y+  S ++S+V   +IM+    E  L+ +L
Sbjct: 522 PQMAAMKWMSYLMPIMFLFILNDYPSGLNYYYFISTLVSVV-TTLIMRKTTNEEALLAQL 580

Query: 571 RST 573
            + 
Sbjct: 581 EAN 583


>gi|146300139|ref|YP_001194730.1| putative inner membrane protein translocase component YidC
           [Flavobacterium johnsoniae UW101]
 gi|146154557|gb|ABQ05411.1| protein translocase subunit yidC [Flavobacterium johnsoniae UW101]
          Length = 636

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 109/627 (17%), Positives = 223/627 (35%), Gaps = 64/627 (10%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME      N  +   L   I+  W  +   P  +E+  E+   + V +      +  A  
Sbjct: 1   MEEKKLDLNSIIGFVLIFGILI-WIMYQNQPSEKEIAAEKAKKELVAKQEAQAKADKAKT 59

Query: 58  IDDRAQ-------------------------ALSMSPRVELKNPSLIGSINLKGAQFDDL 92
                                            +      ++N  +   I  KG    + 
Sbjct: 60  AVAPTAVTPGDTVQLAQLQKTLGGFAYSAALPSAKEAFTTIENEKIKLKIANKGGYIVEA 119

Query: 93  NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152
            L+ +     ++  +V L+  +N      A L+      +    N+  ++   + + +  
Sbjct: 120 TLKEFKKFEKNSGQLVELIKDNN------AHLNIQLQTVDNRTLNTKDLFFEPTLEKIGA 173

Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212
              + +  K   N   E    L  +      D  +      +  +    +          
Sbjct: 174 DQVLSMRLKAGANEFLEYKYVLKPNDYLVGFDVRSQGLNKVLNSAKPLDLQWDLKTYRNE 233

Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
                E   A +  +    +              +  S++     ++ S+ +  K     
Sbjct: 234 KSISYENRYAEIYYEHEDGKINYAGLGKHEEETVDKVSFIAYKQHFFTSILVTDKPFETT 293

Query: 273 ----SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328
               +           +  +F AN         I      + G  ++  +  Y+K+    
Sbjct: 294 KLESTNLVNDEKIDTVFTKQFKANVPLAFSNGEIDYKMQWYFGPADYKVLKSYDKNFQKI 353

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV--KLLFFPLAKKQYVST 386
              + + WG F +I K +F+ +  F +      + I +    +  KL   P+  K ++S 
Sbjct: 354 ---IPLGWGIFGWINKLIFVPLFGFLSSTIGLSLGIAIIIFTIIIKLAMSPITYKSFLSQ 410

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
           A MK ++P I EL EKFK+ P +  Q+  ++LY    +NP+AGC P L+Q+P  +A ++ 
Sbjct: 411 AKMKVLRPDIAELGEKFKKDPMKK-QQETMKLYNKAGVNPMAGCIPALIQLPFMYASFQF 469

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
              + E+R    + W  DL++ D  ++  L   +P Y     H+ ++PI+ ++++F  MK
Sbjct: 470 FPAAFELRQKG-FLWADDLSSFD--SVVKLPFHIPLYG---DHISLFPILAAIAIFFYMK 523

Query: 507 MS---PPPADKGQ------AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
           M+      A   Q      A ++  M    P++ +   +S+ AGL +Y   SN+I+I   
Sbjct: 524 MTSGDQQMAAPQQEGMPDMAKMMKIMIYVSPLMMLIFFNSYGAGLSLYNFISNLITIGIM 583

Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            VI         +  +++    +    
Sbjct: 584 FVIKNYIVDSDKIHAQIQENKQREPKK 610


>gi|270296905|ref|ZP_06203104.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270272892|gb|EFA18755.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 617

 Score =  219 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 108/603 (17%), Positives = 234/603 (38%), Gaps = 50/603 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51
           M+   N    + L  I++  +  F   P  E++  +++   ++ Q  Q +          
Sbjct: 1   MD--KNTITGLVLIAILLVGFS-FLSRPSQEQLEAQQRYYDSIAQVQQREADLKAKAEAA 57

Query: 52  ----SYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
               S A   +D  A         + +V ++N     +++ KG +     L+ Y      
Sbjct: 58  LANESGAEASVDSTALFFDARQGTNSQVTIQNNLAEITVDTKGGRIASATLKEY--MGQD 115

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
            +  VTL S ++    +           N +       +   +      T  ++L   + 
Sbjct: 116 KTTPVTLFSGNDASMNFLFY--------NKKETIQTEDYYFTAVNRTDSTVTMRLSADSN 167

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
           + I F  ++  D + +   +  V          +        + +     +  +     +
Sbjct: 168 SYIDFTYSMHNDTYLIDFTIQAVNMEGKLAATNNYVDIEWSQRARQIEKGYTYENRLAEL 227

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
               +     Y    K+      E   W+   +++++SVF+   +         +    +
Sbjct: 228 TYKIAGEGTDYLSANKNDEKEVPERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQGS 287

Query: 284 RYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGW 338
            Y   +SA   T   P     T  F + G   + T+       ++   + R   L     
Sbjct: 288 GYIKDYSAEMSTKFDPAGKEPTQLFFYFGPNHYKTLTALDKGRDEKWELNRLVYLGWPLI 347

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +        +  +  +   + GI ++  T+ VK + FP   K Y+S+A M+ ++PKIDE
Sbjct: 348 RWINKWFTINIFDWLSSWGLSMGIVLLFMTLIVKAVVFPATWKTYMSSAKMRVLKPKIDE 407

Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           + +K+ +       Q+ ++ LY  + ++P+ GC P+L+Q P+  A++  +  ++E+R   
Sbjct: 408 INKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS 467

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---K 514
            + W  DL+  D          +PF      H+ ++ ++M+++  +  K      D    
Sbjct: 468 -FLWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKYMMQQQDTGAN 521

Query: 515 GQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
            Q   + WM    P++F+F L+ +P+GL  Y+  S ++S+V   +IM+    E  L+ +L
Sbjct: 522 PQMAAMKWMSYLMPIMFLFILNDYPSGLNYYYFISTLVSVV-TTLIMRKTTNEEALLAQL 580

Query: 571 RST 573
            + 
Sbjct: 581 EAN 583


>gi|167751879|ref|ZP_02424006.1| hypothetical protein ALIPUT_00121 [Alistipes putredinis DSM 17216]
 gi|167660120|gb|EDS04250.1| hypothetical protein ALIPUT_00121 [Alistipes putredinis DSM 17216]
          Length = 653

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 110/636 (17%), Positives = 235/636 (36%), Gaps = 64/636 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN------ERKNIQTVKQPNQVDNSYA 54
           M+        I +  +I   +  +  + + +          E+  IQ  +      N+  
Sbjct: 1   MD--KKSIAGIVIVALIFLGFTFYNSHQQKKYQEQLMAYNAEQARIQAEQDSLLALNAPL 58

Query: 55  AVLIDDRA---------QALSMSPRV------------------ELKNPSLIGSINLKGA 87
                             +L    R+                   ++N  L    + +G 
Sbjct: 59  PTADSAAIAAAGERLSGDSLQAQRRIMQFGELLAAAQQAEAEEFTVENEVLKIDFSTRGG 118

Query: 88  QFDDLNLRGYHLDV--SSNSPIVTLLSPSNTKNAYFAELDYVSTA-----NNIELPNSNT 140
           Q  D+ L+ Y         +  V L  P+    A    +            +      + 
Sbjct: 119 QVKDVTLKDYTKYAPRDERNQPVRLFDPATANFALTFYVKNGHNNVLVNTADYTFNLVSM 178

Query: 141 VWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRG 200
             +    + +T   P+          +     S    YL  +   + N +      +  G
Sbjct: 179 EKDADGAQRITMDLPVARDAVLRYEYVVYNIQSPARDYLVDLNVYLKNMAPQMASQTTIG 238

Query: 201 RIMRHKPQTATNTFGVQEGF--IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKY 258
               ++       F  +  +  I                +         S +W+    ++
Sbjct: 239 IDWSNRSYQNEKGFQNENTYTTIYYRAPGESSADDLGISDGEKQKTVSSSLNWVAFKQQF 298

Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318
           ++SV I  +  S+       ++  + Y   FSA        ++       + G  ++  +
Sbjct: 299 FSSVMIAPENFSYADMKFTTAEKGSGYIKDFSAKLTVPYTAQTDHYNFAFYFGPNKYAIL 358

Query: 319 HHYEKDLAIPRFEMLI-----DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373
            H           +          + +     +  +  +    + +FG+ I++  V VK+
Sbjct: 359 KHVATTEGDDELHLERLIPLGWGIFGWVNRWFVIPVFDFLRQFIPSFGLIILILAVLVKV 418

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWP 432
           +  PL  K Y+STA M+ I+P++DEL +K+ +       Q+A ++LYK   INP+ GC P
Sbjct: 419 IISPLTYKSYISTAKMRVIKPEVDELAKKYPRQEDAMKRQQATMELYKKAGINPMGGCIP 478

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +L+Q+P+  A+++    S+E+R    + W  DL++ D  ++ +L   +PFY     HV +
Sbjct: 479 LLIQMPIIIAMFRFFPASIELRGQ-HFLWADDLSSYD--SVLSLPFNIPFYG---DHVSL 532

Query: 493 WPIIMSLSMF------IQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWS 545
           + ++M++++F       Q   S  P   G   ++ + MPV+ +   +S+ +GL  Y+  +
Sbjct: 533 FALLMTVALFAFSYINYQQTASSQPQMAGMKFMMVYLMPVMMLLWFNSYSSGLTYYYFLA 592

Query: 546 NVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           N+++I Q  VI +    +  +   +++  +KN N +
Sbjct: 593 NILTIGQTLVI-RRMIDDEKIHAVMQANAAKNKNRK 627


>gi|32265611|ref|NP_859643.1| putative inner membrane protein translocase component YidC
           [Helicobacter hepaticus ATCC 51449]
 gi|38502920|sp|Q7VJY0|OXAA_HELHP RecName: Full=Inner membrane protein oxaA
 gi|32261659|gb|AAP76709.1| conserved hypothetical membrane protein [Helicobacter hepaticus
           ATCC 51449]
          Length = 591

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 125/597 (20%), Positives = 226/597 (37%), Gaps = 76/597 (12%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS------------- 52
              +AI LS+     +  F+     +  +       T      +  S             
Sbjct: 15  RVLIAIGLSIAFFAIYAYFFPQKPHQNTHQAHTAQNTQDTQESIQASTHTEINTQVAPHQ 74

Query: 53  ----------YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
                                +L  +    + +      I+  G +   + L+       
Sbjct: 75  NIQDSTQSVQNEISSSAQMPHSLKQTIIARVDSDEFELEIDALG-RIKQVYLKDEKFIRH 133

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKILTPTTPIKLVFK 161
             + +  ++           E         + +L      ++  S       TP      
Sbjct: 134 EQTSLFAMIGEVLGMKPAHKEKRDKLPLFGDSQLHTMEMRFSDTSINQQAFDTPYTANIS 193

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSID---------QIRFSPRGRIMRHKPQTATN 212
                     I L ++    ++        +                      +P   T+
Sbjct: 194 YIKLENAPVEIVLTQNLGNLVIKKYLTIHPNLAYDVRLELSKPNIEYFVSNGMRPTADTD 253

Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKS---SISNFHESNSWLGISDKYWASVFIPSKET 269
           T+  +        D  L + +  D         +    S+S++   D+Y+ S+F  +   
Sbjct: 254 TYAFRGVITRNNIDGVLTKFEDGDASSDYLAKNAADIRSSSFVASVDRYYTSLFFSNAPK 313

Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329
             +      +  +     +F  +                + G KE+  +   E       
Sbjct: 314 GLYVVMSGDNAHNPMPYVRFEGDA-----------EFAGYIGPKEYHELQGIENT----- 357

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
              ++++G   F AKP+F+L+ Y Y+L GN+G AI+L T+ V+++ +PL  K  VS   +
Sbjct: 358 LTDVVEYGRITFFAKPLFLLLEYLYDLCGNWGWAIVLLTLIVRIVLYPLTYKGMVSMQKL 417

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           K++ PK+ +L+ ++K   PQ LQ  M+ LYK H  NPL GC P++LQIPVFFAIY+V+  
Sbjct: 418 KDLAPKMKDLQTRYKD-DPQKLQIHMMDLYKKHGANPLGGCLPLILQIPVFFAIYRVLHN 476

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           ++E++ + +  WI DL+A DP                     + P++M +SM+I  K++P
Sbjct: 477 AVELKSSAWILWITDLSAIDPYF-------------------VLPVLMGVSMYISQKLTP 517

Query: 510 PP-ADKGQAMILNWMPVV--FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
               D  Q  I   +P V    F +  FPAGL++YW+ +NV SI+QQ  I K+   +
Sbjct: 518 SNFTDPMQEKIFKMLPWVFTIFFIIFPFPAGLVLYWTINNVFSIIQQISINKIMEGK 574


>gi|325285135|ref|YP_004260925.1| Membrane protein oxaA [Cellulophaga lytica DSM 7489]
 gi|324320589|gb|ADY28054.1| Membrane protein oxaA [Cellulophaga lytica DSM 7489]
          Length = 615

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 122/605 (20%), Positives = 226/605 (37%), Gaps = 56/605 (9%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME         +   L   +   W      P  EE+  ++K  Q  +     +       
Sbjct: 1   MEEKKFDAKTLIGFLLIFGLFVLW-FNTTQPTAEELEAQKKEQQKTEAATVDNKQEKETT 59

Query: 58  IDDRAQALSMSPRV--------------------ELKNPSLIGSINLKGAQFDDLNLRGY 97
             +    LS S  V                     L+N  L   I+ KG Q  +  ++ +
Sbjct: 60  AQEPVLNLSDSTAVANYKSKIGAFGYTPALEGTTVLENNVLYLRISNKGGQIVEAKMKNF 119

Query: 98  HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157
              V+ +S  V L+  +N      A      + ++  + ++  ++   S       T + 
Sbjct: 120 ---VTYDSLPVHLVKDNN------ASFGLTFSTSDNRVLDTKDLYFEPSISKNGNNTVLS 170

Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +  K +     E    +         +  +      +  +    ++  +     +     
Sbjct: 171 MKAKVSATDFLEYRYEIKPDEYLLDFNIRSQGLNGVLNSAAPIALVWKQKGIRHSKSATY 230

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
           E     L             E S          WL     +++S+    K          
Sbjct: 231 ENRYTRLTYNHDDGNISKLSESSDDEEEEVDVKWLSYRQHFFSSILATDKHFETAKLSSV 290

Query: 278 LSDGHARYQAKFSANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
                   + KF+     +LP       ++    L+ G  +   +  Y++       E  
Sbjct: 291 NLVEDDTPETKFTKENTAVLPLKADAGELSYNMNLYYGPTDIKELSKYKEL----GLEDS 346

Query: 334 IDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           I +GW  F     ++    +  L     +GIAI++ T+ V+LL  P+  K Y+S A MK 
Sbjct: 347 IPYGWGIFGFINRYVFTPAYTFLSSFLPYGIAIIVMTILVRLLMSPVTYKSYLSQAKMKV 406

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           ++P+I EL EK+K +P +  Q+  ++LY     +P++GC P LLQ+PVF+A++     S 
Sbjct: 407 LKPEIAELGEKYKDNPMKK-QQETMKLYNKAGASPMSGCLPALLQLPVFYALFMFFPTSF 465

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS--- 508
            +R  P + W  DL++ D   I  L   +P Y     HV ++PI+ S+++F  M M+   
Sbjct: 466 ALRQKP-FLWADDLSSYD--IIAELPFHIPLYG---DHVSLFPILASIAIFFYMMMTSGQ 519

Query: 509 ---PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
                P       IL   P++ +   +S+ +GL +Y+  SN+I+I     I K    E  
Sbjct: 520 NMQQQPGMPNMKFILYLSPLMMLIFFNSYASGLSLYYFVSNLITIFIMLAIKKFIIDEDK 579

Query: 566 LIDRL 570
           +  ++
Sbjct: 580 IHAKI 584


>gi|153806660|ref|ZP_01959328.1| hypothetical protein BACCAC_00930 [Bacteroides caccae ATCC 43185]
 gi|149131337|gb|EDM22543.1| hypothetical protein BACCAC_00930 [Bacteroides caccae ATCC 43185]
          Length = 617

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 107/612 (17%), Positives = 234/612 (38%), Gaps = 52/612 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK----NIQTVKQPNQVDNSYAAV 56
           M+   N    + L  I++  +  F   P  E++  ++K         +Q   +     A 
Sbjct: 1   MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKKYYDSIALVQQQEEALKAKTEAA 57

Query: 57  LIDDRAQALSMSP--------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
           L +++ +A + +               ++ ++N     +   KG +     L+ Y +   
Sbjct: 58  LANNKKEAATTADSSALFFNAMHGTDSKISIQNNVAEITFATKGGRVYSATLKEY-MAQD 116

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
             +PIV       + N  F   +      +         +   +      +  ++L   +
Sbjct: 117 KKTPIVLFDGDDASMNFNFYNKEGAIQTKD---------YFFEAVNKTDSSVTMRLAADS 167

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
           A+ I F  T+   + YL       T  +      +        + +     F  +     
Sbjct: 168 ASYIDFIYTLK-PDSYLMNFEIKATGMADKLASTNYVDIDWSQRARQLEKGFTYENRLSE 226

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
           +    +  +       K           W+   +++++SVFI  ++    S    +    
Sbjct: 227 LTYKVTGDDVDNLSAAKDDSQELQGHIDWVAFKNQFFSSVFIAEQDFDKVSVKSRMEQQG 286

Query: 283 ARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWG 337
           + Y   +SA   T   P     T    + G   F T+   +K       + R   L    
Sbjct: 287 SGYIKDYSAEMNTFFDPSGKEPTEMHFYFGPNHFKTLKALDKGRTEKWELHRLVYLGWPL 346

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
             +        +  +      + GI +++ T+ VK++ +P   K Y+S+A M+ ++PKID
Sbjct: 347 IRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKID 406

Query: 398 ELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           E+ +K+ +       Q+ ++ LY  + ++P+ GC P+LLQ P+  A++  +  ++E+R  
Sbjct: 407 EINKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQ 466

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--- 513
             + W  DL+  D     T    +PF      H+ ++ ++M+++  +  K +    D   
Sbjct: 467 S-FLWADDLSTYD--AFITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMSMQDTGA 520

Query: 514 ----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
                    ++  MP++F+F L+ +P+GL  Y+  S +IS+    ++++    E  L+  
Sbjct: 521 QPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRKTTNETKLLAI 579

Query: 570 LRSTFSKNYNSQ 581
           L +        +
Sbjct: 580 LEANKKDPKQMK 591


>gi|325969856|ref|YP_004246047.1| membrane protein oxaA [Spirochaeta sp. Buddy]
 gi|324025094|gb|ADY11853.1| Membrane protein oxaA [Spirochaeta sp. Buddy]
          Length = 604

 Score =  217 bits (552), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 128/595 (21%), Positives = 228/595 (38%), Gaps = 44/595 (7%)

Query: 1   MERNWNYFVAIALSVIIV-----YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55
           M+   N  +AI LSV+++          F   P ++    E +   T          Y+ 
Sbjct: 1   MD--KNTILAIVLSVLVITVGMTIQTTFFAPDPVVQSSQQEVQQASTPSATTLEPAQYSQ 58

Query: 56  VLIDDRAQALSMSPRV-----------ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
           +  +    +      V                  I   N  GA      L+ +      +
Sbjct: 59  IPSNMAWNSKLPGSLVSVGNQGSSTPFTFSTEYFIIEFNPNGASVSSFKLKEHL----DD 114

Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
              V LL  S   N  F        AN I+      +               +      +
Sbjct: 115 GEPVELLFKSQNSNDAFLLYAGKDKANPIDANFRYQISGNKVIFTQEFALLSEDGKSVGD 174

Query: 165 NILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
           +    +T +   + YLF+I     N+    +  S          +        +      
Sbjct: 175 SFSLTKTYTFGAKDYLFQIDVDTKNSVNKAVPLSFENSAYTLAFEPQIGPSFAKLDNNYN 234

Query: 224 LGDKSLVEQKYSDIEKSSISN----FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279
                + E   S   +  +SN      +  SW+ +  KY++ + IP       S  +   
Sbjct: 235 YRRFYIKEDGSSKKNQVKLSNGAYTTTKPLSWVALVGKYFSLIAIPDATNYTVSLSETSE 294

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW--- 336
           +G     + +          ++ T   +     K   TI+      +     + ++    
Sbjct: 295 EGLPLQSSIYITRPAIRSASQTDTFRFYAGPQLKGDMTIYDDASSNSFGVANLQLEQALD 354

Query: 337 --GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
              W  ++   +  +++  Y ++ N+G+ I++ T  +KL+ +P++KK   STA M ++ P
Sbjct: 355 SSSWLGWLETILKTILNLLYKVIPNYGVGIIILTFLLKLVLYPISKKGMESTAKMSSLSP 414

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           K+ E++EK+  +P +   + M  LYK   INP+ GC P+LLQ P+  A Y +++   E+R
Sbjct: 415 KMAEIKEKYPDNPTK-QNEEMATLYKKEKINPMGGCLPMLLQFPILIAFYGLLNKHFELR 473

Query: 455 HAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPA 512
            A F  GWI DL+  D   +FT    LPF       + + PI+ ++SM   MK++     
Sbjct: 474 GAMFIPGWIPDLSMPD--TVFTFGFNLPFLGNQ---LHLLPIVYTVSMIYSMKITQNAST 528

Query: 513 DKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
              Q  ++ +    MP++F F L + P+GLI+YWS  N +SI QQ    K    E
Sbjct: 529 AGSQQGMMKFMTYGMPLMFFFVLYNAPSGLILYWSVMNALSIFQQLYTNKKKSKE 583


>gi|320109423|ref|YP_004185013.1| membrane protein insertase, YidC/Oxa1 family [Terriglobus saanensis
           SP1PR4]
 gi|319927944|gb|ADV85019.1| membrane protein insertase, YidC/Oxa1 family [Terriglobus saanensis
           SP1PR4]
          Length = 597

 Score =  217 bits (551), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 104/589 (17%), Positives = 205/589 (34%), Gaps = 67/589 (11%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-------------PNQV 49
              +  V + L   ++   Q FY     + +       QT +Q                 
Sbjct: 15  DMKSMLVPMLLIAGVLGGLQ-FYRSKHTQPLQAPSAQTQTAQQPSAVAPAAPGAAPQTTA 73

Query: 50  DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
             +             +      ++N         +GA+     L+ Y  +      +V 
Sbjct: 74  QTATVGATQAAPVVTAAAEQTTTIENELYRIEFTNRGAEVKSWILKRYKDNKGVPLDLVH 133

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
               +     + A L   +  + +       ++       LT    +   +         
Sbjct: 134 ----AGAAREFGAPLSLYTYDSGLTAQLRQALYVPSVTGKLTAPQTLSFTYSANGLD-VT 188

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
           +T   DE YL       + +        P   ++            +      +      
Sbjct: 189 KTFRFDESYLLHADVVASRDGS------PVRALIAWPGGFGDQDQVLDYNGSQLESSSEG 242

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS---------- 279
                +  + S          ++G+ D+++ +VFIP    +  +   + +          
Sbjct: 243 KTDHVNFAKVSGGKTLDGPLDYVGVVDQFFGAVFIPDNPQTATAVSLHQTIDVEKLKRST 302

Query: 280 ---DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
                    +        T L   S  T   ++AG K +  +H             ++D+
Sbjct: 303 AITSTTPTGKIATVPIIGTALGDVSGHTQARIYAGPKSYTILHTVSTTGG-ETLAPIVDF 361

Query: 337 GWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           G+F  + KP+F  + +    V  N+G AI++ T+ + L+  PL      S   M+ +QP+
Sbjct: 362 GFFGIVGKPLFFALHFVQEHVASNWGWAIVVFTILINLVLLPLRILSMKSALKMQRLQPQ 421

Query: 396 IDELRE-----KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +D ++      K        +   ++QL K + +N   GC P L+Q+P+  A++ ++   
Sbjct: 422 MDAIKARYAKYKVTDPKRADMNAEIMQLQKDNGVNMFGGCIPTLIQLPLLIAMFSMLQKV 481

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +E+R A ++ W+ DL AADP +                   I PI+M +S F+     P 
Sbjct: 482 VELRQAHWF-WLHDLTAADPYH-------------------ILPIVMVVSQFLVQFYMPS 521

Query: 511 PA-DKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           P  D  Q  ++ +M P    +   ++ +GL +YW   N+I IVQQ V+ 
Sbjct: 522 PGVDPQQQKMMAFMMPAFSGYMTWNYSSGLALYWCIGNLIMIVQQYVMN 570


>gi|91215968|ref|ZP_01252937.1| putative inner membrane protein translocase component YidC
           [Psychroflexus torquis ATCC 700755]
 gi|91185945|gb|EAS72319.1| putative inner membrane protein translocase component YidC
           [Psychroflexus torquis ATCC 700755]
          Length = 636

 Score =  216 bits (550), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 103/600 (17%), Positives = 212/600 (35%), Gaps = 59/600 (9%)

Query: 1   MERNW----NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           ME       N  +  AL  +I+           I    +    ++T    + V  S    
Sbjct: 1   MEEKKTFDKNSIIGFALIGLILIGVMYMNPNEDIVPEQDNTDQVETNTSTDPVSTSKQTP 60

Query: 57  ----------------------------LIDDRAQALSMSPRVELKNPSLIGSINLKGAQ 88
                                                       ++N  +   I+ KG Q
Sbjct: 61  KRSQENGIASNLQDSVNSELARRDYGAFAYSALQDFAKDDAVTTIENEVIKLEISNKGGQ 120

Query: 89  FDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK 148
             +  ++ Y          V L+   N      A  +     N+  + N++ ++   +  
Sbjct: 121 IVEAKMKQYDTYKG---NPVYLIKDGN------ANFNIEFETNDGRVINTSDLYFEPNLT 171

Query: 149 ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208
                  + +  K ++    E    L+          + +  ++ +  S +  +      
Sbjct: 172 TENGNQVLTMRAKVSDLEFLEFYYGLESEDYMM-NFRIRSQGLNSVISSDQANLSWKVKV 230

Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268
                    E     +      E+     +        ES  W+     ++ SV +    
Sbjct: 231 LRKAKSISYENRYTEIVYLYEDEKDDYTGQGDEAVEEDESIDWIAFKQHFFTSVLLTDTP 290

Query: 269 TS----FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324
                               +   F A     L     + T   + G  +F  +  Y  +
Sbjct: 291 FEKGKMTSLNLVQDEQIDTVFTKNFLAEVPLKLNNGEFSETMNWYHGPSDFDVLSSY--E 348

Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384
             +     L    + +           +  + + ++G+AI++ T+ V+++  P+  K YV
Sbjct: 349 RKLDEIVPLGWGLFGWINRYIFIPFFGFLSSSLPSYGLAIIVMTIVVRIVLSPITYKSYV 408

Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
           S A MK ++P+I+E+ EKFK +  +  Q+  ++LY    ++PLAGC P LLQIPVF+A++
Sbjct: 409 SQAKMKVLKPEINEINEKFKDNAMKK-QQETMKLYSKTGVSPLAGCIPALLQIPVFYALF 467

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           +    + ++R    + W  DL++ D    +  +  L        HV ++PI+ S+++F  
Sbjct: 468 QFFPSAFDLRQKG-FLWADDLSSYDVIFEWDAYIPL-VSFAYGNHVSLFPILASIAIFFY 525

Query: 505 MKMS--------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            +M+          P      +I+ + P + +   +++ +GL +Y+  SN+I+I    VI
Sbjct: 526 TQMTAGQNMQQSSQPGMPNMKVIMYFAPFIMLIFFNNYASGLSLYYFISNLITIGIMLVI 585


>gi|330996282|ref|ZP_08320167.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Paraprevotella xylaniphila YIT 11841]
 gi|329573474|gb|EGG55081.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Paraprevotella xylaniphila YIT 11841]
          Length = 629

 Score =  216 bits (550), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 104/615 (16%), Positives = 219/615 (35%), Gaps = 56/615 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN--ERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N      L   ++  +  F      E      +       +Q  Q+         
Sbjct: 1   MD--KNTLTGFILIAAVLIGFSYFSRPSEAEMEAQRRQDSIATVAQQKAQMAQEAKEKAE 58

Query: 59  DDRAQALS-------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
                 ++              +  V L+N  +  + N +G     + L+ Y        
Sbjct: 59  IAHQAQVALDTTSLFYAHRRGEAQDVVLENELIKLTFNTRGGTVQKVELKEYKNQQGG-- 116

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             VTL    + +  +       +  +          +      +   T  ++L       
Sbjct: 117 -PVTLFDEKDARMQFMLGGKMENINSG--------DFFFTPINVSDTTLTMRLQASTGGT 167

Query: 166 ILFERTISLDEHY-LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224
           + F+ T+    +   F I      N       +          Q     F  +  + ++ 
Sbjct: 168 LDFDYTLLPHSYMVDFTIRANGLGNFFAPSMKTLDIAWNEMARQQEKG-FDFESRYSSLT 226

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
                    Y     +      E   W+   +++++ V I  ++ +            + 
Sbjct: 227 YKIKNEGTDYLSETSAESEKIAEPLDWVAFKNQFFSCVLIAHQDFTEAHLSSTPQQKASG 286

Query: 285 YQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHY------EKDLAIPRFEMLIDWG 337
           Y   + A+  T   P     T   +      +  + H       +KDL +     L    
Sbjct: 287 YLKDYEADMKTFFDPNGKTPTQMQMLFAPNNYHLLQHTNKLSASDKDLELEDLVYLGWPL 346

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + +     +  +  +  +L  + GI ++L T+ VK+L +P  +K Y+S+A M+ ++PKID
Sbjct: 347 FKWINRFFIIYIFDWLSSLGLSMGIVLLLLTILVKVLVYPTTRKSYLSSAKMRVLKPKID 406

Query: 398 ELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           EL  K+ +       Q+  +QLY  + ++P+ GC P+LLQ+P++ A++  +  ++E+R  
Sbjct: 407 ELNAKYPKPEDAMKKQQETMQLYSQYGVSPMGGCLPMLLQMPIWIALFNFVPNAIELRGE 466

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS----MFIQMKM---SP 509
             + W  DL+A D    +     L        H+ I+ ++  L+     +I M+    S 
Sbjct: 467 S-FLWASDLSAYDDVIRWDKSIWLIGD-----HLSIFCLLFCLTNIVNTWITMRQQQNSM 520

Query: 510 PPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
                 Q      ++  MPV F F  +++ +GL  Y+  S + SI+    + +    +  
Sbjct: 521 TGEQAQQMKLMQYMMYIMPVAFFFMFNNYSSGLNYYYFLSGLTSILIMWFL-RKTTDDKK 579

Query: 566 LIDRLRSTFSKNYNS 580
           L+ +L + +  N  +
Sbjct: 580 LLAKLEANYQANKAN 594


>gi|332882339|ref|ZP_08449967.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679723|gb|EGJ52692.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 629

 Score =  216 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 101/614 (16%), Positives = 218/614 (35%), Gaps = 54/614 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N      L   ++  +  F      E     R++        +   +  A    +
Sbjct: 1   MD--KNTLTGFILIAAVLIGFSYFSRPSEAEMEAQRRQDSIATVAQQKAQMAQEAKEEAE 58

Query: 61  RAQALS---------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
            A                    +  V L+N  +  + N +G     + L+ Y        
Sbjct: 59  IAHQAQVALDTTSLFYAHRRGEAQNVVLENELIKLTFNTRGGTVQKVELKEYKNQQGG-- 116

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             VTL    + +  +       +  +          +      +   T  ++L       
Sbjct: 117 -PVTLFDEKDARMQFMLGGKTENINSG--------DFFFTPINVSDTTLTMRLQASTGGT 167

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           + F+  +    + +   +      +I                +     F  +  + ++  
Sbjct: 168 LDFDYKLLPHSYMIDFTIQANGLGNIFAPSMKTLDIAWNEMARQQEKGFDFESRYSSLTY 227

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
                   Y     +      E   W+   +++++ V I  ++ +            + Y
Sbjct: 228 KIKNEGTDYLSETSAESEKIAEPLDWVAFKNQFFSCVLIAHQDFTEAHLSSTPQQKASGY 287

Query: 286 QAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGW 338
              + A+  T   P     T   +      +  + H  K      DL +     L    +
Sbjct: 288 LKDYEADMKTFFDPSGKTPTQMQMLFAPNNYHLLQHTNKLSASDKDLELEDLVYLGWPLF 347

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +     +  +  +  +L  + GI ++L T+ VK+L +P  +K Y+S+A M+ ++PKIDE
Sbjct: 348 KWINRFFIIYIFDWLSSLGLSMGIVLLLLTILVKVLVYPTTRKSYLSSAKMRVLKPKIDE 407

Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           L  K+ +       Q+  +QLY  + ++P+ GC P+LLQ+P++ A++  +  ++E+R   
Sbjct: 408 LNAKYPKPEDAMKKQQETMQLYSQYGVSPMGGCLPMLLQMPIWIALFNFVPNAIELRGES 467

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS----MFI---QMKMSPP 510
            + W  DL+A D    +     L        H+ I+ ++  L+     +I   Q + S  
Sbjct: 468 -FLWASDLSAYDDVIRWDKSIWLIGD-----HLSIFCLLFCLTNIVNTWISMRQQQNSMT 521

Query: 511 PADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
                Q      ++  MPV F F  +++ +GL  Y+  S + SI+    + +    +  L
Sbjct: 522 GEQAQQMKFMQYMMYIMPVAFFFMFNNYSSGLNYYYFLSGLTSILIMWFL-RKTTDDKKL 580

Query: 567 IDRLRSTFSKNYNS 580
           + +L + +  N  +
Sbjct: 581 LAKLEANYQANKAN 594


>gi|288926777|ref|ZP_06420687.1| inner membrane protein OxaA [Prevotella buccae D17]
 gi|288336458|gb|EFC74834.1| inner membrane protein OxaA [Prevotella buccae D17]
          Length = 632

 Score =  216 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 114/623 (18%), Positives = 241/623 (38%), Gaps = 62/623 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN-------------ERKNIQTVKQPN 47
           M+   N  + + L   +++ +  +Y  P  EE                E +  Q      
Sbjct: 1   MD--KNTIIGMVLIAALLFGYS-WYSQPSAEEQRAAFVQDSIAQAKKRELEKAQKADAAA 57

Query: 48  QVDNSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH----- 98
           +          D  A           RV LKN  +  ++N KGA  +   ++ Y      
Sbjct: 58  RKQTEQQQAAADTTALFHAAMQGEEQRVVLKNNKVELTLNSKGATVERAVVKNYVGHDIN 117

Query: 99  -LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155
             D S +   VTL    +    +   A+   ++TA+    P++ T   +           
Sbjct: 118 VKDGSKDRKDVTLFEGKDQSLKFMLAAKEANINTADLYFTPSAQTDSTVTFTASAGAGRS 177

Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
           + L +    + L    +S++        D  T +   Q R   + R    + + AT T+ 
Sbjct: 178 LSLKYTLGRDYLLHMQLSVEGMGGLFAPDMKTLDIDWQDRVKQQERGFTFENRYATLTYH 237

Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQ 274
              G              Y       +     ES  W+   ++++++V I   +   ++ 
Sbjct: 238 ETAGGT-----------DYLSETSEKVDEPCKESIDWVAFKNQFFSAVMIVKDDFQKNAL 286

Query: 275 FKYLSDGHARYQAKFSAN--EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
              +         K      +    P     +    + G  +F  +   E +    RF  
Sbjct: 287 LTSIPQEKGSGYLKQYQARLKTAFDPNGRQPSEFEFYFGPNDFRLLQKVEHE---SRFGK 343

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLV--------GNFGIAIMLTTVFVKLLFFPLAKKQYV 384
            ++     ++  P+F  ++ F+ +            GI ++L T+ +K+L +P+ KK Y+
Sbjct: 344 SLEMERLVYLGWPLFRWINRFFTIYVFDFLRNYFPMGIVLILITLLLKVLTYPMVKKSYM 403

Query: 385 STANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
           S+A M+ ++PK++E  +++ +   Q+  Q+AM+  Y  + ++PL+GC P+L+Q+P++ A+
Sbjct: 404 SSAKMRVLKPKLEEATKQYDKPEDQMQKQQAMMAEYSKYGVSPLSGCLPMLIQMPIWIAM 463

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSM 501
           +  +  ++++R    + W+KDL+  DP   +     L         +   +  ++ S   
Sbjct: 464 FNFVPNAIQLRGQS-FLWMKDLSTFDPLFEWNHNLWLIGDHLSLTCILFCVAQVLYSWMT 522

Query: 502 FIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             Q +         Q  ++ W    MP++F F  + + +GL  Y+  S   S      + 
Sbjct: 523 MRQQRDQMVGQQAEQMKMMQWMMYLMPLMFFFMFNDYSSGLNFYYFVSLFFSAAIMWTL- 581

Query: 558 KMHGAEIGLIDRLRSTFSKNYNS 580
           +    +  L++ L + + +N N+
Sbjct: 582 RKTTNDKKLLEILEARYRENKNN 604


>gi|228472035|ref|ZP_04056803.1| inner membrane protein OxaA [Capnocytophaga gingivalis ATCC 33624]
 gi|228276647|gb|EEK15360.1| inner membrane protein OxaA [Capnocytophaga gingivalis ATCC 33624]
          Length = 616

 Score =  216 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 108/610 (17%), Positives = 217/610 (35%), Gaps = 51/610 (8%)

Query: 1   MERNWN---YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME   N     +  AL  +++  +      P+    +      Q+  Q      S     
Sbjct: 1   MEEKRNNTFSLIGFALMFVVLIYYMYNQKPPQQTTESTNNTTQQSSSQQVATPASTTLPT 60

Query: 58  ID----------------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
                                 +       E++N  +   ++ KG Q  +L ++      
Sbjct: 61  DSLGLSKYKETLGAFGFSAALPSAKEGAFTEIENNLIKLQVSNKGGQITNLLVKNQKT-- 118

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161
             N   V L+   N      +     +T +N  L   +  ++            + +   
Sbjct: 119 -YNGKPVELIKDGNA-----SFSLKFTTNDNRTLETKDLFFSPT-----LSGNTLSMKLH 167

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
            ++N   E   +L            +              ++              E   
Sbjct: 168 VSDNQYLEYVYTLRPDEYMVDFSIRSVGLSQVFNTGVTPELLWKLKARRMEKSVTYEDRY 227

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS----KETSFHSQFKY 277
                +    +          S   +S  W+      ++S  I                 
Sbjct: 228 VQAVVQYEDNRDDKLSAGGEDSEEFKSIKWVDFKQHLFSSFLISDKPLASGKISSKNLAT 287

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337
               + +    F+A          ++ +   F G  ++     Y+K+  + +  + + WG
Sbjct: 288 SEGDNVQATKAFAAEFPIAFTSGELSESLHFFYGPSDYHIFKKYDKEYGLTK-AIPLGWG 346

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            F +I K   + +    +     G+AI++ T+ V++L  P+  K Y+S A MK ++P+I+
Sbjct: 347 IFGWINKWFVIPVFDLLSSFMAVGVAIIVLTIIVRILLSPIQYKSYLSQAKMKVLRPEIE 406

Query: 398 ELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           E+  K+K S      Q+  + LY    +NPL+GC P LLQ+PVFFA++     +  +R  
Sbjct: 407 EINNKYKGSENAMKRQQETMALYSKAGVNPLSGCIPALLQMPVFFALFSFFPTAFMLRQK 466

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-------QMKMSP 509
             + W +DL++ D   +  L   +PFY     HV ++PI+ S++M I       QM+ + 
Sbjct: 467 S-FMWAEDLSSYD--AVAQLPFSIPFYGN---HVSLFPILASVTMLIYMLMTTGQMQQTK 520

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
                    ++   P++ +F  +++ +GL +Y+  SN+I+I     I      E  +  +
Sbjct: 521 QEGMPDMRFMMYLSPIMMLFFFNNYASGLSLYYFISNLITIFIMLAIKYWIIDEKRIHAK 580

Query: 570 LRSTFSKNYN 579
           ++    K   
Sbjct: 581 IQENKQKPRK 590


>gi|315608951|ref|ZP_07883923.1| inner membrane protein OxaA [Prevotella buccae ATCC 33574]
 gi|315249331|gb|EFU29348.1| inner membrane protein OxaA [Prevotella buccae ATCC 33574]
          Length = 632

 Score =  216 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 114/623 (18%), Positives = 241/623 (38%), Gaps = 62/623 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN-------------ERKNIQTVKQPN 47
           M+   N  + + L   +++ +  +Y  P  EE                E +  Q      
Sbjct: 1   MD--KNTIIGMVLIAALLFGYS-WYSQPSAEEQRAAFVQDSIAQAKKRELEKAQKADAAA 57

Query: 48  QVDNSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH----- 98
           +          D  A           RV LKN  +  ++N KGA  +   ++ Y      
Sbjct: 58  RKQTEQQQAAADTTALFHAAMQGEEQRVVLKNNKVELTLNSKGATVERAVVKNYVGHDIN 117

Query: 99  -LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155
             D S +   VTL    +    +   A+   ++TA+    P++ T   +           
Sbjct: 118 VKDGSKDRKDVTLFEGKDQSLKFMLAAKEANINTADLYFTPSAQTDSTVTFTASAGAGRS 177

Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
           + L +    + L    +S++        D  T +   Q R   + R    + + AT T+ 
Sbjct: 178 LSLKYTLGRDYLLHMQLSVEGMGGLFAPDMKTLDINWQDRVKQQERGFTFENRYATLTYH 237

Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQ 274
              G              Y       +     ES  W+   ++++++V I   +   ++ 
Sbjct: 238 ETAGGT-----------DYLSETSEKVDEPCKESIDWVAFKNQFFSAVMIVKDDFQKNAL 286

Query: 275 FKYLSDGHARYQAKFSAN--EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
              +         K      +    P     +    + G  +F  +   E +    RF  
Sbjct: 287 LTSIPQEKGSGYLKQYQARLKTAFDPNGRQPSEFEFYFGPNDFRLLQKVEHE---SRFGK 343

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLV--------GNFGIAIMLTTVFVKLLFFPLAKKQYV 384
            ++     ++  P+F  ++ F+ +            GI ++L T+ +K+L +P+ KK Y+
Sbjct: 344 SLEMERLVYLGWPLFRWINRFFTIYVFDFLRNYFPMGIVLILITLLLKVLTYPMVKKSYM 403

Query: 385 STANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
           S+A M+ ++PK++E  +++ +   Q+  Q+AM+  Y  + ++PL+GC P+L+Q+P++ A+
Sbjct: 404 SSAKMRVLKPKLEEATKQYDKPEDQMQKQQAMMAEYSKYGVSPLSGCLPMLIQMPIWIAM 463

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSM 501
           +  +  ++++R    + W+KDL+  DP   +     L         +   +  ++ S   
Sbjct: 464 FNFVPNAIQLRGQS-FLWMKDLSTFDPLFEWNHNLWLIGDHLSLTCILFCVAQVLYSWMT 522

Query: 502 FIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             Q +         Q  ++ W    MP++F F  + + +GL  Y+  S   S      + 
Sbjct: 523 MRQQRDQMVGQQAEQMKMMQWMMYLMPLMFFFMFNDYSSGLNFYYFVSLFFSAAIMWTL- 581

Query: 558 KMHGAEIGLIDRLRSTFSKNYNS 580
           +    +  L++ L + + +N N+
Sbjct: 582 RKTTNDKKLLEILEARYRENKNN 604


>gi|298373472|ref|ZP_06983461.1| inner membrane protein OxaA [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298274524|gb|EFI16076.1| inner membrane protein OxaA [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 633

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 87/612 (14%), Positives = 215/612 (35%), Gaps = 43/612 (7%)

Query: 4   NWNYFVAIALSVIIVYAWQNFYVYPRIE---------EMNNERKNIQTVKQPNQVDNSYA 54
           N    + I L V I   +Q F    + +          + N +   Q   Q      S  
Sbjct: 2   NKQTVIGIILIVAIFIGFQYFNKPSKEQIAERQRINDSIKNAQTEQQLAIQQQVTPTSDT 61

Query: 55  AVLIDDRA-----------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
             ++   +            A   + ++ ++   L    + KG       L+ Y      
Sbjct: 62  TRIVASDSLREAHFGIFAKAAKGDTAQITIETELLKLRFSPKGGFVSYAELKNYKTY--D 119

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
             P+V     S        +          E+                    ++L  +  
Sbjct: 120 KKPLVLFEGESENSFGITMQTSDNRVLTTNEVYFVPQPITKDGNGNT--ILTLRLQPETD 177

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
           + I F   I  + + +   +      S      +        K +        +  +  +
Sbjct: 178 SYIDFIYKIPQNSYCVDFDIVAHNMQSYFPPMTNRLDFTWNTKIRQQELGRKTENRYATL 237

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK--YLSDG 281
               +  + +     K+   +      W    D +++++ +     +  +     Y  + 
Sbjct: 238 NYMYTDNDIERLKEGKNDAKSASTPTKWFAAKDHFFSTILMSKTGFATANLSSEIYSDEN 297

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD------LAIPRFEMLID 335
               +     + I      +  T   L+    ++  +  +           +     L  
Sbjct: 298 SKYLKNYTVHSVINFDATGNKPTNLQLYFVPNQYKVLAGFNDGLDKAQRPNLQELIPLGW 357

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
             + +     +  L +   + + ++G+ I++ TV +K++  PL  K Y+S+A M+ ++P+
Sbjct: 358 TLFRWVNKYAIIPLFNLLGSFMSSWGLIILIVTVIIKIVLLPLTFKSYMSSAKMRVLKPQ 417

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           +D + E+         Q+A + LY++  ++P+ GC P++LQ+P+  A++  +  + E+R 
Sbjct: 418 VDAINERIPADKMMERQQAQMSLYRSVGVSPMGGCLPMILQMPILVAVFMYLPSAFELRQ 477

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--- 512
              + W  DL+  D     T    +PF      H+ ++ ++M+++  I  K++       
Sbjct: 478 QS-FLWATDLSTFDTLPFLTWNTAIPFIGK---HISLFCLLMTITNVIYTKVNMAATAGS 533

Query: 513 ---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
                    ++  MP++F F  + + +GL  Y+  S +++++Q  +  ++   +  L+ +
Sbjct: 534 NQQMAMMKWMMYLMPLMFFFIFNEYASGLTYYYFVSLLLTVLQTYL-FRLFVNDQKLLQQ 592

Query: 570 LRSTFSKNYNSQ 581
           L         ++
Sbjct: 593 LELAKQTKKPAK 604


>gi|260174448|ref|ZP_05760860.1| putative inner membrane protein translocase component YidC
           [Bacteroides sp. D2]
 gi|315922715|ref|ZP_07918955.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696590|gb|EFS33425.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 617

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 105/602 (17%), Positives = 225/602 (37%), Gaps = 50/602 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49
           M+   N    + L  I++  +         +            +  +++     K    +
Sbjct: 1   MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKKYYDSIAVVQQQEEALKAKTEAAL 58

Query: 50  DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            NS   V     + AL          ++ ++N     +   KG +     L+ Y +    
Sbjct: 59  ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQDK 117

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
            +P+V       + N  F          +         +   +      +  ++L   +A
Sbjct: 118 KTPVVLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
           + I F  T+   + YL       T                  + +     F  +     +
Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMEDKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
               +          K    N      W+   +++++SVFI  ++    S    +    +
Sbjct: 228 TYKVTGDNVDNLSAAKDDSQNLPGRIDWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287

Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWGW 338
            Y   +SA   T   P     T  + + G   F T+   +K+      + R   L     
Sbjct: 288 GYIKDYSAEMNTFFDPTGKEPTEMYFYFGPNHFKTLKALDKERDEKWELHRLVYLGWPLI 347

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +        +  +      + GI +++ T+ VK++ +P   K Y+S+A M+ ++PKIDE
Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKIDE 407

Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           + +K+ +       Q+ ++ LY  + ++P+ GC P+LLQ P+  A++  +  ++E+R   
Sbjct: 408 INKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513
            + W  DL+  D     T    +PF      H+ ++ ++M+++  +  K +    D    
Sbjct: 468 -FLWADDLSTYD--AFITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMSMQDTGAQ 521

Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
                   ++  MP++F+F L+ +P+GL  Y+  S +IS+    ++++    E  L+  L
Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRTTDETKLLAIL 580

Query: 571 RS 572
            +
Sbjct: 581 EA 582


>gi|281357428|ref|ZP_06243916.1| membrane protein insertase, YidC/Oxa1 family [Victivallis vadensis
           ATCC BAA-548]
 gi|281316031|gb|EFB00057.1| membrane protein insertase, YidC/Oxa1 family [Victivallis vadensis
           ATCC BAA-548]
          Length = 590

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 124/593 (20%), Positives = 225/593 (37%), Gaps = 63/593 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF---------------------------YVYPRIEEM 33
           M+ +    +AIA+  ++++ W+ F                                +   
Sbjct: 1   MKFDKETLIAIAVCCVVLFGWEPFSRYMGWSAAPVPPAAAAPAAAPQPNTEVPVSAVPAA 60

Query: 34  NNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93
             +      V     V+ +       +    +S  P VELKN  ++ S +        + 
Sbjct: 61  APQPNTEVPVSAVPAVEPAVPEKKTQEALVQVSPLPPVELKNKDMVLSFDPVRGSIRSIT 120

Query: 94  LRGYHLDVSSNSPIVTL--LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151
           L  Y  + + ++ IV     S     + Y A + +V T          +           
Sbjct: 121 LEHY-QNAARDARIVLDQSFSSQGALSLYQAGVPWVVTQVVKNRVEPGSDGQSRYLLDRR 179

Query: 152 PTTPIKLVFKNANNILF---------ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRI 202
             T     F  +                 I+        +   + N             +
Sbjct: 180 IQTIGGDDFLLSQVWEIGATGYETDCSFQITNLARRPLVLNQLIMNGGDLAAWA-----M 234

Query: 203 MRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYW--- 259
           +        +     E       D    ++  +D  ++          W GIS+KY+   
Sbjct: 235 ISGDKMRTPSHRMDFETADGSFYDIKADKKDDADYFQNPAPMV----DWAGISNKYFGVI 290

Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319
            +   P +     +      D             + +  G+S +     ++G K    + 
Sbjct: 291 LTAKEPFQLFQGRTMQMRGKDKVYIPTVGARLPAMMLNAGESKSVAFRYYSGPKMTQLLE 350

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379
            +E           + WG   ++A+ +  ++   +   G++G++I++ T+ V+LLF+P+ 
Sbjct: 351 AFEPSTNRMMH---LAWGPLDYLARLLLWVLVQLHGFCGSYGVSIIILTLMVRLLFYPVT 407

Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
            K   S   M+ +QPKI  LREK+K +P Q+L   M++LY+   +NP  GC PILLQIPV
Sbjct: 408 AKANASMRKMQAVQPKIAALREKYKDNP-QLLNSKMMELYREEKVNPFGGCLPILLQIPV 466

Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           FFA+Y  +  ++++R    + W KDLAAAD      L+          + +    ++M+ 
Sbjct: 467 FFALYATLDGAVQLRQVS-FLWAKDLAAADTVAKIPLYFYD-------LPINPLVLMMTA 518

Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            M IQ +M+P   D  Q  ++  MPVV +  L   P+GL +YW+ SN  SI+Q
Sbjct: 519 LMMIQQRMTPMAMDPMQKKMMLMMPVVMLIFLYDLPSGLTLYWTVSNFFSIIQ 571


>gi|332521156|ref|ZP_08397614.1| membrane protein insertase, YidC/Oxa1 family [Lacinutrix algicola
           5H-3-7-4]
 gi|332043249|gb|EGI79446.1| membrane protein insertase, YidC/Oxa1 family [Lacinutrix algicola
           5H-3-7-4]
          Length = 634

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 114/625 (18%), Positives = 231/625 (36%), Gaps = 64/625 (10%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMN------NERKNIQTVKQPNQVDN 51
           ME         +   L   I+  +  +   P  EE+         + + +   +     N
Sbjct: 1   MEEKKLDVKSIIGFVLIFGILL-FMMWQNQPTPEELEAEEKAKQAQIDAENKAKAAAAQN 59

Query: 52  SYAAVLIDDRAQAL--------------------SMSPRVELKNPSLIGSINLKGAQFDD 91
                   D +                       +      + N  L    + KG    +
Sbjct: 60  DTKVTTAQDFSNTTEGDSLRKIALQNKLGAFSYFAQDGETVVDNGVLQLKFSNKGGHLAE 119

Query: 92  LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151
           + L  +   V  +S  + L+   N      A  +      +  + N+  ++   +     
Sbjct: 120 VKLNKF---VDYDSLPIYLVKDKN------ASFNINFGTTDSRILNTQDLYFQPTKTKNG 170

Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
             T + +  K +     E    +  +         +     +I  S    +   +     
Sbjct: 171 ENTIVSMKLKVSETKFLEYKYIIKPNDYMIDFTIQSQGLSSEINSSQEVNLKWEQKAYRH 230

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
           +     E     L  +    +     +     +  E   W+     +++S+    K+   
Sbjct: 231 DESISYENRYTRLTYQHDDGKIDKLSQGGEDDDVEEDMDWMSFRQHFFSSILTTDKQFKS 290

Query: 272 HSQFKYL----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327
            +          +    +  +FSA     L G  I  +  L+ G  +   + +Y+K+L  
Sbjct: 291 VALTSKDLVEDEEIDTVFTKQFSAKTALALNGNEINESLGLYYGPTDSKILKNYDKNL-- 348

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
               +   WG F +I K +F+ +  F +    +GIAI++ TV +KL    +  KQY+S  
Sbjct: 349 -EESIPFGWGIFGWINKYLFVPLFSFLSSFLPYGIAIIVMTVLIKLSMSFVQYKQYLSQM 407

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
            MK ++P++D +REK K +  +  Q+  + L      +PLAGC P L+Q+PVF+A++   
Sbjct: 408 KMKILKPELDAIREKHKDNKMKA-QQETMALQNKAGASPLAGCLPALIQMPVFYALFMFF 466

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             +  +R    + W  DL++ D    F     +PFY     H+ ++PI+  +++F  MK+
Sbjct: 467 PTAFALRQK-KFLWADDLSSFDSIYKFPDGFSIPFYG---DHISLFPILAGIAIFFYMKL 522

Query: 508 SPPPAD---------KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           +                 A ++ +M    P++ +   +S+ +GL +Y+  SN+ISI    
Sbjct: 523 TTGQQQMSAPQQEGMPDMAKMMKYMIYFAPIMMIIFFNSYASGLSLYYFISNLISIGILL 582

Query: 555 VIMKMHGAEIGLIDRLRSTFSKNYN 579
           VI      E  ++  +++  +K   
Sbjct: 583 VIKNFILDEEKILAGIQANKAKPKK 607


>gi|229496606|ref|ZP_04390320.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406]
 gi|229316503|gb|EEN82422.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406]
          Length = 620

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 97/603 (16%), Positives = 229/603 (37%), Gaps = 46/603 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + ++L  +++  +  F   P  EE   +         P +  +S A +    
Sbjct: 1   MD--KNTIIGVSLIAVVLIGF-TFLNRPTPEEATPKEPIEAISPAPAETTSSSAVLPTST 57

Query: 61  RAQALSMSPR----------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
            + A   SP           ++L+N  L+ S + +G       L+ Y          + L
Sbjct: 58  DSLAPETSPLLGLSGGQEQIIKLENEKLVVSFSNRGGAAVQARLKEYKA---QKEQPLDL 114

Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170
            +P +               +  +L       +  S         ++L   +A  + F  
Sbjct: 115 FTPEDCSFNLPLRTKMGQVIDTKDLYFEPIAQSDTS-------LTMRLRVDSATYLDFAY 167

Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230
           T+  +++ L   +     + +       +   +  K +    ++  +  + A+       
Sbjct: 168 TLVPNDYRLRLSISGAHLDRLFPSNMRYQDLEIGQKIRRQELSWQNENQYSAIYYKLFAD 227

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
           + +    + S     +E  SW+   DK+++SV+I     +F S     +      +    
Sbjct: 228 KVERLSDKGSKSEKVNERISWIAFKDKFFSSVWIADAANAFESSSLEQTVMPKDGEYTKD 287

Query: 291 ANEITILPGKSI---TTTNFLFAGAKEFPTIHHYEKDL-------AIPRFEMLIDWGWFY 340
              +T  P  +    +    L+ G  E   +  Y++ +        +     +    + +
Sbjct: 288 CKVVTSFPFSNAQDASAHFTLYMGPLEHHLLKAYDQGIEEDGDRLHLEHLVYVGGSVFRW 347

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                +  ++ +    + N+G+ I+L T+ +K    PL  K Y+S A M+ ++P+I  + 
Sbjct: 348 LNVHLIIPIVDFLSKYISNWGLIILLLTLIIKTALSPLTFKSYMSQAKMRVLKPQIQAIN 407

Query: 401 EKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +K+            +  + LYK    +P++GC P+LLQ+P   ++Y     ++ +R   
Sbjct: 408 DKYPGQEQAMMMKRSQETMALYKQAGASPMSGCLPMLLQMPFLISLYMFFPTAIALRGES 467

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSP-PPADK 514
            + W +DL+  D    +  F I         H+ ++ ++ +++  +  +  M+     D 
Sbjct: 468 -FLWAQDLSTYDAVISWN-FDIPILSGLMGNHLSLFCLLWAVTNILYSRYTMNMSATGDN 525

Query: 515 GQAMILNWMPVVFVFA----LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
            Q  ++ +MP +         ++  +GL  Y+  S +I+I+Q  +  ++   E  ++ ++
Sbjct: 526 QQMKMMKYMPYIMSIMFFFFFNNNASGLCYYYFISTLITILQ-FLGSRLLINEEKVLAKM 584

Query: 571 RST 573
              
Sbjct: 585 EEN 587


>gi|332296677|ref|YP_004438599.1| Membrane protein oxaA [Treponema brennaborense DSM 12168]
 gi|332179780|gb|AEE15468.1| Membrane protein oxaA [Treponema brennaborense DSM 12168]
          Length = 603

 Score =  215 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 125/613 (20%), Positives = 230/613 (37%), Gaps = 53/613 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQN----FYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAA 55
           ME   N   AI LS +++  +      F+   P  ++    +          Q+  +  A
Sbjct: 1   ME--KNTVWAIILSTLVLVIFMFVQITFFPAVPAAKQTEQYQNTADVSSAQGQLPVNTVA 58

Query: 56  VLIDDRAQALS------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
           V   +   +L+               +  ++N  +  +   +G    +  L  +      
Sbjct: 59  VSGAEENGSLNAAGSAGDSAAAVTEEQFVIQNGKVKVTFTNRGGDIINYELLEHK---DG 115

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
           NS +    + S    A+        T    ++ +   + +   G   T T          
Sbjct: 116 NSGVEMADNVSAKNRAFSVSFGAAGTPIIDDIFSVKKIDDNTIGFYKTFTVKNND--GTE 173

Query: 164 NNILFERTISLDEHYLFK-----IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218
           ++ +F +  + D           I    T   +     +   R          +     E
Sbjct: 174 SSFVFAKQYTFDPAGYMFRLDVSIDGDDTLKGLAFGNSAYTIRTSPQIGPYFDSKNNRYE 233

Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
               +  + S  ++    +       + +  +W G+S KY+  + +P   T         
Sbjct: 234 NRTFMSYNGSKKKKT--TLGSGQSKVYDDGYTWTGVSGKYFEILGVPLNPTVMQDVTYSA 291

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD-------LAIPRFE 331
           +     Y           +       T + + G K   T+  Y            +   E
Sbjct: 292 ALEVDNYANAQVMMSRGPITQSDAQDTYYFYVGPKTEETLKIYNNAAENVWHLSGLKLNE 351

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
            L   G  +++   +   M   Y ++ N+G++I++ T+ +KL+ FPL KK  +ST  M+ 
Sbjct: 352 SLESSGILFWLETFLKWCMELLYKIIPNWGVSIIILTILLKLVLFPLTKKSSLSTLKMQE 411

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +QPK+ E++ KFK  P ++    M +LYK    NPL+GC P+L+Q P+ FA+Y + +   
Sbjct: 412 LQPKMQEIQAKFKDQPDKM-NAEMAKLYKETGYNPLSGCLPLLIQFPLIFAMYNLFNNYF 470

Query: 452 EMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI----QMK 506
           E R A F  GWI DL+  D          LPF       + + PII  +S  +       
Sbjct: 471 EFRGAMFIPGWIPDLSVGDSVYALN--FNLPFLGNQ---LRLLPIIYVISQLLFGKVTQS 525

Query: 507 MSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
            +   A   Q  I+ + MP+ F F   + P+GL+IYW+ SN + +VQQ ++ K   A+  
Sbjct: 526 GTAAGASGMQMKIMMYGMPLFFFFIFYNAPSGLLIYWTVSNALQLVQQVILNKTMKAK-- 583

Query: 566 LIDRLRSTFSKNY 578
               + S   +  
Sbjct: 584 -RAEIESREPEKK 595


>gi|299135904|ref|ZP_07029088.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp.
           MP5ACTX8]
 gi|298602028|gb|EFI58182.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp.
           MP5ACTX8]
          Length = 601

 Score =  215 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 104/586 (17%), Positives = 220/586 (37%), Gaps = 62/586 (10%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNF---YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           + N ++ V + +   +++  Q +   +  P  E+     ++              AA   
Sbjct: 15  QDNRSFMVMLLVMFGVIFGLQYWRAKHTPPPPEKSPAITQSATPQSSAPAAGTPTAASSA 74

Query: 59  DDRAQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117
              A     +    + +N     + + +GAQ     L+G++        +V  L  +  +
Sbjct: 75  SSVATVQGTAESTTVVENELYRITFSNRGAQVTSWVLKGFNDTTGHPLNLV--LDDAAKQ 132

Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
             Y   L         +L  +  V +         +         A N+   +T S    
Sbjct: 133 FGYPLSLYTYDAGLTQQLKQALYVPSATGSLQAPASLSFD---YAAGNVTVHKTFSFGAD 189

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           Y+      V  +                 P    +           +   +  + ++ DI
Sbjct: 190 YVIHADTVVLRDGAPISALLAW-------PAALGDMENQLAYGYGQIDTSTNGKDEHLDI 242

Query: 238 EKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ--------AK 288
           + +S      +   + G+SD+Y+A+VF+P +         +      +            
Sbjct: 243 KHTSGGATLKQPFDFAGVSDQYFAAVFMPDQPQDAMLVTLHNQIDVNKMSRMPGFSKGTA 302

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                 T +   S      LF G K    +            E L+D+G++  + K +F+
Sbjct: 303 QVPVLGTAVGNVSGHNQTRLFVGPKSIKVLKSVRTANN-NTLETLLDFGFWGPVGKVLFL 361

Query: 349 LMSYFYN---------LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
            +   ++            ++G AI+  T+ + L+  PL  +   S   M+ IQP+ID +
Sbjct: 362 GLQAVHSALPHALDAVHDYSWGWAIIFFTILINLILLPLRVQGMRSMLKMQRIQPQIDAI 421

Query: 400 REKFKQSP-----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           + K+K           +   +++  K + ++   GC P L+Q+P+ FA + +++  +E+R
Sbjct: 422 KAKYKNPKATDPKMAEMNAEIMKTQKDNGVSMFGGCVPSLIQLPLLFAFFTMMTRVVELR 481

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-D 513
            + ++ W+ DL+ ADP +                   I PI+M ++ F+    +P P  D
Sbjct: 482 QSHWY-WLHDLSLADPHH-------------------ILPILMVITSFLAQYYTPSPGVD 521

Query: 514 KGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
             Q  ++ +M P+   +    + +GL +YW+ SN++ I+QQ V+ +
Sbjct: 522 PQQQKMMAFMMPLFSGYMTWQYASGLALYWNISNIVMIIQQQVMNR 567


>gi|312129338|ref|YP_003996678.1| membrane protein insertase, yidc/oxa1 family [Leadbetterella
           byssophila DSM 17132]
 gi|311905884|gb|ADQ16325.1| membrane protein insertase, YidC/Oxa1 family [Leadbetterella
           byssophila DSM 17132]
          Length = 611

 Score =  215 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 110/599 (18%), Positives = 222/599 (37%), Gaps = 38/599 (6%)

Query: 1   MERN--WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           ME     NY + + L V++  A+  FY                T   P  V+       I
Sbjct: 1   MENKIDKNYIIGLLLMVLMFTAYSIFYTPSNPTTPEKTEVTSTTKTAPKAVN------PI 54

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS----SNSPIVTLLSPS 114
            D   A +    + ++N  +  + + +G     + L+ Y          +   + +   S
Sbjct: 55  LDSTTAAAPEKEIVVENKDIKVTFSSRGGVIKQVALKDYKTYADYIGGKDKAEMVIFDGS 114

Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174
            +   +      + TA      +            +    P+ LVF         +    
Sbjct: 115 KSNLDF-----EIPTATGALKLSQVNFHTDAVNATVAEGQPLTLVFSTQIQGGTLQKTYT 169

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
                F+I   ++   ++ +  +    +              +    + +      E+ +
Sbjct: 170 LNDKGFEIQHGISTQGLEAVVRNAPIVLNWENHLQVLENDLNENRKGSQINYFD-KEENF 228

Query: 235 SDIEKSSISNFHE----SNSWLGISDKYWASVFIPSKETSFHSQFK--YLSDGHARYQAK 288
            D+  +S SN +E       W     KY+ S  +        ++F     +   +  +  
Sbjct: 229 EDLGGNSTSNANEEAELPVKWFSFHQKYFTSGIVFENSFFQKAKFNMETPTADESVVKIG 288

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF---YFIAKP 345
            +  EI         T+   + G  E   +     D     F+  +  G+          
Sbjct: 289 TATAEIAYADFIGNKTSFKYYFGPNELKELKAVGYD-----FQKNLYLGYDIVKPINRYI 343

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
              L ++  + V N+G+ I++  + +KL+  PL  K Y+S+A M+ + P+I+ ++EK   
Sbjct: 344 FVPLFTWVESFVSNYGLLIIVVVLIIKLVLTPLIYKSYMSSAKMRVLAPEINAIKEKVGD 403

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
            P + LQ+  ++LY+   +NPL+GC P+LLQ+P+  +++ +    +  R    + W KDL
Sbjct: 404 DPVK-LQQETMKLYQQVGVNPLSGCIPLLLQMPILMSVFFLFPNLVMFRQK-EFLWAKDL 461

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMILNWMP 524
           +  D   I   F +        + V +  I      +   + +P          I    P
Sbjct: 462 STYDNL-ISWGFNMPILGNHLSLFVVLMTISSLAFTYYNNQNTPDQPGPVDMKKISYIFP 520

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI--GLIDRLRSTFSKNYNSQ 581
           VVF+F L+SFPA L  Y+  SN+++I QQ ++ +    E    +++  +  +      +
Sbjct: 521 VVFMFVLNSFPAALSFYYLVSNLVTIAQQLIVKRFVNEEKILSILENNKRNYHSKPQKK 579


>gi|88803448|ref|ZP_01118974.1| putative inner membrane protein translocase component YidC
           [Polaribacter irgensii 23-P]
 gi|88781014|gb|EAR12193.1| putative inner membrane protein translocase component YidC
           [Polaribacter irgensii 23-P]
          Length = 622

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 103/609 (16%), Positives = 230/609 (37%), Gaps = 58/609 (9%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME+     N F+ + L   I++ W +       E        I          +   +  
Sbjct: 1   MEQKKFDINSFIGMILLGGIIFWWMSTRETEIKETPIATTTEIIAQTGDPTGKSISNSST 60

Query: 58  IDDRA---------------QALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDV 101
           I++ +                A++ S  + + +N  +  +I+ KG Q  ++ ++ Y    
Sbjct: 61  IENDSIKQVALTNRLGAFAQSAITASEGISILENELIKLTIDNKGGQIKEVLIKNYKT-- 118

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161
             +S  + ++  +N         +      +  + N+  ++   +         + L   
Sbjct: 119 -YDSLPLYMIKDNNG------SFNLNFGTTDNRILNTKDLFFQPTITQNGENQVVSLKLN 171

Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
            ++    E    +    Y+          S      +P              +   +   
Sbjct: 172 VSDTKFLEYRYEMKPKEYMVNFSIRSQGLSNVINASTPMNLDWSLNAYRNEKSMKTENKM 231

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY--- 277
            +    K+  E +Y     + ++       W+     ++ S  +     +  +       
Sbjct: 232 YSWYYYKTENEVEYLRPGNTEVA---NDVDWVFYKQHFFTSALLTDTPFNNATVTSTDLV 288

Query: 278 -LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
              +    +  ++       L    +      F G  ++  +  Y+        ++    
Sbjct: 289 LNEELDTVFTKRYELKTPLALSNGELNYNMKWFYGPSDYNLLESYDGTDLDQTADLG-WG 347

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            + +      + + +    ++ N+G+ I+L T+ V+L+  PL  K Y+S+A MK I+P++
Sbjct: 348 IFGFLNRTVFYPVFNLLKGVLSNYGLIIILMTIIVRLIMSPLVYKSYLSSAKMKVIRPEL 407

Query: 397 DELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
             L EK+         Q+  + + +   ++ ++GC P LLQ+PVFFA++K    +L +R 
Sbjct: 408 TALNEKYPGKENAMKRQQETMAIQRKAGVSMMSGCIPALLQMPVFFALFKFFPTNLALRQ 467

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
              + W  DL++ D   IF L   +PFY     HV ++PI+ S+++F  MKM+       
Sbjct: 468 ES-FLWAPDLSSYD--TIFQLPFTIPFYG---DHVSLFPILASIAIFFYMKMNQSQQANM 521

Query: 516 QA----------MILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           QA           ++ +M    P++ +F  +++ + L +Y+  SN+++IV   VI     
Sbjct: 522 QAPAQEGMPDMGKMMKYMIYFSPIMMLFFFNNYASSLSLYYFISNLLTIVIMLVIKNYVI 581

Query: 562 AEIGLIDRL 570
            E  +  ++
Sbjct: 582 DEDKIHAQI 590


>gi|319954150|ref|YP_004165417.1| protein translocase subunit yidc [Cellulophaga algicola DSM 14237]
 gi|319422810|gb|ADV49919.1| protein translocase subunit yidC [Cellulophaga algicola DSM 14237]
          Length = 618

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 112/592 (18%), Positives = 220/592 (37%), Gaps = 57/592 (9%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME         +   L   I+  +  +   P  EE+  ++   + +    + +       
Sbjct: 1   MEEKKLDVKSIIGFVLIFGILL-FMFWQNQPTDEEVAAKKVEQEQIDAKAKEEKVEVNTE 59

Query: 58  IDDRAQALSMSPRVE--------------------LKNPSLIGSINLKGAQFDDLNLRGY 97
                  L  S  V                     L+N  +   I+ KG Q  +  ++ +
Sbjct: 60  QKAPVLNLQDSTAVTNYKNTIGAFGFTKPSEETTVLENNLVYLRISNKGGQIIEAKMKNF 119

Query: 98  HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157
                 +S  V L+   N      A      + N+    N+  ++   S         + 
Sbjct: 120 TT---YDSIPVYLVKDGN------ASFALNFSTNDNRTLNTADLFFEPSLTTSGDNQVLS 170

Query: 158 LVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216
           +  K + N   E    +  + YL          S       P     + K    + +   
Sbjct: 171 MKAKISENQFLEYRYEMKPDDYLVDFAIKTQGLSSVINNTKPINLDWKLKAIRHSKSIKY 230

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS----FH 272
              +  +  +    +               +   WL     +++S+   +K       F 
Sbjct: 231 SNRYTRLTYNHEDGKISKLSDSSDDDEETEKDVKWLSYRQHFFSSILATNKPFESAKLFS 290

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
                      +Y   +++     L G  ++     + G  +   +  Y+        E 
Sbjct: 291 KNLVEDESHTQKYMKDYASEMPLKLEGGELSYAMNWYYGPTDAKVLAQYKDL----GLED 346

Query: 333 LIDWGWFYF--IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
            + +GW  F  I + +F  +  F + +   GIAI++ T+ V+L   P+  K Y+S A MK
Sbjct: 347 SVPFGWGIFGLINRYVFTPLFTFLSGMVPAGIAIIIMTILVRLAMSPVTYKSYLSQAKMK 406

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            ++P+I E+ EK+K +  +  Q+  ++L     ++PL+GC P L+Q+P+F+A++     S
Sbjct: 407 VLKPEIAEINEKYKDNAAKK-QQETMKLNTKAGVSPLSGCIPALIQMPIFYALFMFFPTS 465

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ------ 504
             +R  P + W  DL++ D   I  L   +PFY     HV ++PI+ S+++F        
Sbjct: 466 FALRQKP-FLWADDLSSYDV--IAQLPFTIPFYG---DHVSLFPILASIAIFFYMMMTTG 519

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             M+  P       I+   P++ +   +S+ +GL +Y+  SN+I+I     I
Sbjct: 520 QNMTQQPGMPNMKFIMYLSPLMMLVFFNSYASGLSLYYFISNLITIFIMLAI 571


>gi|329955034|ref|ZP_08296015.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Bacteroides clarus YIT 12056]
 gi|328526324|gb|EGF53339.1| membrane protein insertase, YidC/Oxa1 family domain protein
           [Bacteroides clarus YIT 12056]
          Length = 615

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 109/600 (18%), Positives = 227/600 (37%), Gaps = 48/600 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER---KNIQTVKQPNQVDNSYAAVL 57
           M+   N    + L  +++  +       + +    +R      Q  ++   +     A L
Sbjct: 1   MD--KNTITGLVLIAVLLVGFSFLSRPSKEQLAAQQRYYDSIAQVQQREADLKAKAEAAL 58

Query: 58  IDDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
            +D+    + S             +V ++N     ++  KG +     L+ Y        
Sbjct: 59  ANDKEAQTADSTALFFNALQGTDSQVTIQNNLAELTVATKGGRISSATLKEY--MGQDKK 116

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             VTL S  +    +           N +       +          T  ++L   +A+ 
Sbjct: 117 TPVTLFSGDDASMNFLFY--------NKKETIQTEDYYFTVVNRTDSTVTMRLSADSASY 168

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           I F   +  ++ YL       T  +               + +     +  +     +  
Sbjct: 169 IDFNYAMH-NDTYLVDFTIDATGMANKLASTDYVDIEWSQRARQIEKGYTYENRLSELTY 227

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
             +     Y    K+      E   W+   +++++SVF+   +         +    + Y
Sbjct: 228 KITGDGTDYLSAGKNDEKEVAERLDWIAFKNQFFSSVFLADADFEKTKLNSKMEAQGSGY 287

Query: 286 QAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWGWFY 340
              +SA   T   P     T  F + G   + T+   +K       + R   L      +
Sbjct: 288 IKDYSAEMSTAFDPTGKTPTQLFFYFGPNHYKTLTALDKGREDKWELNRLVYLGWPLIRW 347

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   +  +  +   + GI ++L T+ VK + FP   K Y+S+A M+ ++PKIDE+ 
Sbjct: 348 INKWFTINIFDWLSSWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKPKIDEIG 407

Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +K+ +       Q+ ++ LY  + ++P+ GC P+L+Q P+  A++  +  ++E+R    +
Sbjct: 408 KKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS-F 466

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQ 516
            W  DL+  D          +PF      H+ ++ ++M+++  +  +      D     Q
Sbjct: 467 LWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTRFMMQQQDTGANPQ 521

Query: 517 AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
              + WM    PV+F+F L+ +P+GL  Y+  S +IS+V   +IM+    E  L+ +L +
Sbjct: 522 MAAMKWMSYLMPVMFLFILNDYPSGLNYYYFISTLISVV-TTLIMRKMTNEEALLAQLEA 580


>gi|213962572|ref|ZP_03390834.1| inner membrane protein OxaA [Capnocytophaga sputigena Capno]
 gi|213954898|gb|EEB66218.1| inner membrane protein OxaA [Capnocytophaga sputigena Capno]
          Length = 609

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 114/596 (19%), Positives = 232/596 (38%), Gaps = 42/596 (7%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEM---NNERKNIQTVKQPNQVDNSYA 54
           M+         +  AL  I++  W      P  EE+     +++        N  +N+  
Sbjct: 1   MDERKFDVKSIIGFALIFILLM-WFMNNNKPSQEELAKHKAQQEQQANKTAANTQNNTST 59

Query: 55  AVLID------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
               D            + +    L+N  L  +I+ +G Q  ++ L+ +      ++  V
Sbjct: 60  VQPTDLGNFAYSTTLPSAKNEVTVLENKDLKLTISNRGGQPKEVLLKEFKT---YDALPV 116

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
            L+   N      A      T    +  N+  ++   +      +  + +  K + N   
Sbjct: 117 YLVKDWN------ATFSLNFTTAQDKKLNTKDLYFEPTLSENNGSQVLSMKLKTSENTYL 170

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
           E   +L +      +   +      +  S    I               E        + 
Sbjct: 171 EYVYTLPKEGYMLDLVVRSQGLAGAVNTSKPMNIDWKLQARRMEKSVTYENRYTQAAIQY 230

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             ++     +  +     E  SW+      + SV I        +   +    +   + K
Sbjct: 231 EGDRINRMSQAGNDEQKEEKVSWVAYKQHLFTSVLISDNPFEKGNFISHNIAINEGKEVK 290

Query: 289 FSANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           ++ N +T LP       ++ +   + G  ++  +  Y     +    + + WG F ++ K
Sbjct: 291 YTKNFLTSLPIKAKSGELSESLHFYFGPSDYNVLKQYNDKYELTEL-IPLGWGIFGWLNK 349

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
            +F+ +  F     + G+ I+L T  V++L  P+  K YVS A MK ++P+IDE+ +K+ 
Sbjct: 350 WLFIPLYNFLADYFSVGLVIILMTFIVRILLSPIVYKSYVSQAKMKVLRPEIDEINKKY- 408

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
              P   Q+  + LY    +NPL+GC P LLQ+PVF A++        +R    + W  D
Sbjct: 409 -DEPMKRQQETMALYSKAGVNPLSGCIPALLQLPVFLALFNFFPTEFGLRQKS-FLWAHD 466

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI--LN 521
           L++ D   IF L   +PFY     HV ++P++ S+++ I   M+        Q  +  + 
Sbjct: 467 LSSYD--AIFELPFSIPFYGS---HVSLFPLLASIAILIYSLMTMAQTVQPQQPGVPNMK 521

Query: 522 WM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           ++    P++ +F  +++ +GL +Y+  SN+++I     I      E  +  +++  
Sbjct: 522 FLIYLSPIMMLFFFNNYASGLSLYYFISNLLTIGIMLAIKYWIIDEKKIHAQIQEN 577


>gi|298482875|ref|ZP_07001058.1| inner membrane protein OxaA [Bacteroides sp. D22]
 gi|298271075|gb|EFI12653.1| inner membrane protein OxaA [Bacteroides sp. D22]
          Length = 617

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 103/602 (17%), Positives = 225/602 (37%), Gaps = 50/602 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49
           M+   N    + L  I++  +         +            +  +++     K    +
Sbjct: 1   MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKKYYDSIAVVQQQEEALKAKTEAAL 58

Query: 50  DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            NS   V     + AL          ++ ++N     +   KG +     L+ Y +    
Sbjct: 59  ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQDK 117

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
            +P++       + N  F          +         +   +      +  ++L   +A
Sbjct: 118 KTPVMLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
           + I F  T+   + YL       T                  + +     F  +     +
Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMEDKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
               +          K    +      W+   +++++SVFI  ++    S    +    +
Sbjct: 228 TYKVTGDNVDNLSAAKDDSQDLPGRIDWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287

Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWGW 338
            Y   +SA   T   P     T  + + G   F T+       ++   + R   L     
Sbjct: 288 GYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELHRLVYLGWPLI 347

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +        +  +      + GI +++ T+ VK++ +P   K Y+S+A M+ ++PKIDE
Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKIDE 407

Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           + +K+ +       Q+ ++ LY  + ++P+ GC P+LLQ P+  A++  +  ++E+R   
Sbjct: 408 ISKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513
            + W  DL+  D   I T    +PF      H+ ++ ++M+++  +  K +    D    
Sbjct: 468 -FLWADDLSTYD--AIITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMSMQDTGAQ 521

Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
                   ++  MP++F+F L+ +P+GL  Y+  S +IS+    ++++    E  L+  L
Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRKTTDETKLLAIL 580

Query: 571 RS 572
            +
Sbjct: 581 EA 582


>gi|315928320|gb|EFV07635.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 500

 Score =  214 bits (543), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 126/530 (23%), Positives = 236/530 (44%), Gaps = 55/530 (10%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRI--EEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           +     +A+ +S +    +  F++  +    E N  +KN Q     N  +   A      
Sbjct: 9   QQKRILLAVVISFLFFVIYDYFFIPKQPLKIEQNITQKNQQNTSINNTPNIQNATTNTPS 68

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
            A     S   ++++      I+  G +     L+      +     + L+S  N+   Y
Sbjct: 69  AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKD-RKYQNEKGEFINLVSKENS--PY 124

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
             E+ +   + N E      V N  +  +    + +  + +N + +  E+ I+      +
Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLTQNLSGLKIEKDITFYPKGNY 184

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
           +I   ++ N+              ++P  A +++ V    + +   +++   K  D+EK 
Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNKETIETYKDGDVEKD 236

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
             +N     S     D+Y+A+             F           +K +     +    
Sbjct: 237 ESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAISKDANQNPIVFAYS 281

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
                   + G+KE   +   +     PR E ++++GWF FIAKPMF  +++ +  +GN+
Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNW 336

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420
           G AI++ T+ V+++ FPL  K  +S   +K++ PK+ ++RE++K   PQ +   M++LYK
Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480
            H  NP++GC PILLQIP+FFAIY+V+  ++E++ AP+  WI DL+  DP          
Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529
                      I PI+M  +MF+Q  ++P    D  QA I+ ++PV+F F
Sbjct: 448 -----------ILPILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTF 486


>gi|237719464|ref|ZP_04549945.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229451324|gb|EEO57115.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 617

 Score =  214 bits (543), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 105/602 (17%), Positives = 225/602 (37%), Gaps = 50/602 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49
           M+   N    + L  I++  +         +            +  +++     K    +
Sbjct: 1   MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKKYYDSIAVVQQQEEALKAKTEAAL 58

Query: 50  DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            NS   V     + AL          ++ ++N     +   KG +     L+ Y +    
Sbjct: 59  ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQDK 117

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
            +P++       + N  F          +         +   +      +  ++L   +A
Sbjct: 118 KTPVMLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
           + I F  T+   + YL       T                  + +     F  +     +
Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMEDKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
               +          K    +      W+   +++++SVFI  ++    S    +    +
Sbjct: 228 TYKVTGDNVDNLSAAKDDSQDLPGRIDWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287

Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWGW 338
            Y   +SA   T   P     T  + + G   F T+       ++   + R   L     
Sbjct: 288 GYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELHRLVYLGWPLI 347

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +        +  +      + GI +++ T+ VK+L +P   K Y+S+A M+ ++PKIDE
Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVLVYPATWKTYMSSAKMRVLKPKIDE 407

Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           + +K+ +       Q+ ++ LY  + ++P+ GC P+LLQ P+  A++  +  ++E+R   
Sbjct: 408 INKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513
            + W  DL+  D   I T    +PF      H+ ++ ++M+L+  +  K +    D    
Sbjct: 468 -FLWADDLSTYD--AIITFPFHIPFLGN---HLSLFCLLMTLTNILNTKYTMSMQDTGAQ 521

Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
                   ++  MP++F+F L+ +P+GL  Y+  S +IS+    ++++    E  L+  L
Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRTTDETKLLAIL 580

Query: 571 RS 572
            +
Sbjct: 581 EA 582


>gi|237714509|ref|ZP_04544990.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262406374|ref|ZP_06082923.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294643254|ref|ZP_06721080.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Bacteroides ovatus SD CC 2a]
 gi|294806447|ref|ZP_06765288.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Bacteroides xylanisolvens SD CC 1b]
 gi|229445278|gb|EEO51069.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262355077|gb|EEZ04168.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292641377|gb|EFF59569.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Bacteroides ovatus SD CC 2a]
 gi|294446310|gb|EFG14936.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 617

 Score =  213 bits (542), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 106/602 (17%), Positives = 225/602 (37%), Gaps = 50/602 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49
           M+   N    + L  I++  +         +            +  +++     K    +
Sbjct: 1   MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKRYYDSIAVVQQQEEALKAKTEAAL 58

Query: 50  DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            NS   V     + AL          ++ ++N     +   KG +     L+ Y +    
Sbjct: 59  ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFATKGGRVYSAMLKDY-MAQDK 117

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
            +PI+       + N  F          +         +   +      +  ++L   +A
Sbjct: 118 KTPIMLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
           + I F  T+   + YL       T                  + +     F  +     +
Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMEDKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
               +          K    +      W+   +++++SVFI  ++    S    +    +
Sbjct: 228 TYKVTGDNVDNLSAAKDDSQDLPGRIDWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287

Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWGW 338
            Y   +SA   T   P     T  + + G   F T+       ++   + R   L     
Sbjct: 288 GYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELHRLVYLGWPLI 347

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +        +  +      + GI +++ T+ VK+L +P   K Y+S+A M+ ++PKIDE
Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVLVYPATWKTYMSSAKMRVLKPKIDE 407

Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           + +K+ +       Q+ ++ LY  + ++P+ GC P+LLQ P+  A++  +  ++E+R   
Sbjct: 408 INKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513
            + W  DL+  D   I T    +PF      H+ ++ ++M+L+  +  K +    D    
Sbjct: 468 -FLWADDLSTYD--AIITFPFHIPFLGN---HLSLFCLLMTLTNILNTKYTMSMQDTGAQ 521

Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
                   ++  MP++F+F L+ +P+GL  Y+  S +IS+    ++++    E  L+  L
Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRTTDETKLLAIL 580

Query: 571 RS 572
            +
Sbjct: 581 EA 582


>gi|293370211|ref|ZP_06616771.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Bacteroides ovatus SD CMC 3f]
 gi|292634708|gb|EFF53237.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Bacteroides ovatus SD CMC 3f]
          Length = 617

 Score =  213 bits (542), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 106/602 (17%), Positives = 225/602 (37%), Gaps = 50/602 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49
           M+   N    + L  I++  +         +            +  +++     K    +
Sbjct: 1   MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKKYYDSIAVVQQQEEALKAKTEAAL 58

Query: 50  DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            NS   V     + AL          ++ ++N     +   KG +     L+ Y +    
Sbjct: 59  ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQDK 117

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
            +P++       + N  F          +         +   +      +  ++L   +A
Sbjct: 118 KTPVMLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
           + I F  T+   + YL       T                  + +     F  +     +
Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMENKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
               +          K    N      W+   +++++SVFI  ++    S    +    +
Sbjct: 228 TYKVTGDNVDNLSAAKDDSQNLPGRIDWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287

Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWGW 338
            Y   +SA   T   P     T  + + G   F T+       ++   + R   L     
Sbjct: 288 GYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELHRLVYLGWPLI 347

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +        +  +      + GI +++ T+ VK+L +P   K Y+S+A M+ ++PKIDE
Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVLVYPATWKTYMSSAKMRVLKPKIDE 407

Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           + +K+ +       Q+ ++ LY  + ++P+ GC P+LLQ P+  A++  +  ++E+R   
Sbjct: 408 INKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513
            + W  DL+  D   I T    +PF      H+ ++ ++M+L+  +  K +    D    
Sbjct: 468 -FLWADDLSTYD--AIITFPFHIPFLGN---HLSLFCLLMTLTNILNTKYTMSMQDTGAQ 521

Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
                   ++  MP++F+F L+ +P+GL  Y+  S +IS+    ++++    E  L+  L
Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRTTDETKLLAIL 580

Query: 571 RS 572
            +
Sbjct: 581 EA 582


>gi|295083924|emb|CBK65447.1| protein translocase subunit yidC [Bacteroides xylanisolvens XB1A]
          Length = 617

 Score =  213 bits (541), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 104/602 (17%), Positives = 225/602 (37%), Gaps = 50/602 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49
           M+   N    + L  I++  +         +            +  +++     K    +
Sbjct: 1   MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKRYYDSIAVVQQQEEALKAKTEAAL 58

Query: 50  DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            NS   V     + AL          ++ ++N     +   KG +     L+ Y +    
Sbjct: 59  ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFATKGGRVYSAMLKDY-MAQDK 117

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
            +PI+       + N  F          +         +   +      +  ++L   +A
Sbjct: 118 KTPIMLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
           + I F  T+   + YL       T                  + +     F  +     +
Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMENKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
               +          K    +      W+   +++++SVFI  ++    S    +    +
Sbjct: 228 TYKVTGDNVDNLSAAKDDSQDLPGRIDWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287

Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWGW 338
            Y   +SA   T   P     T  + + G   F T+       ++   + R   L     
Sbjct: 288 GYIKDYSAEMNTFFDPTGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELHRLVYLGWPLI 347

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +        +  +      + GI +++ T+ VK++ +P   K Y+S+A M+ ++PKIDE
Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKIDE 407

Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           + +K+ +       Q+ ++ LY  + ++P+ GC P+LLQ P+  A++  +  ++E+R   
Sbjct: 408 ISKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513
            + W  DL+  D   I T    +PF      H+ ++ ++M+++  +  K +    D    
Sbjct: 468 -FLWADDLSTYD--AIITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMSMQDTGAQ 521

Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
                   ++  MP++F+F L+ +P+GL  Y+  S +IS+    ++++    E  L+  L
Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRKTTDETKLLAIL 580

Query: 571 RS 572
            +
Sbjct: 581 EA 582


>gi|299146179|ref|ZP_07039247.1| inner membrane protein OxaA [Bacteroides sp. 3_1_23]
 gi|298516670|gb|EFI40551.1| inner membrane protein OxaA [Bacteroides sp. 3_1_23]
          Length = 617

 Score =  213 bits (541), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 103/602 (17%), Positives = 224/602 (37%), Gaps = 50/602 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49
           M+   N    + L  I++  +         +            +  +++     K    +
Sbjct: 1   MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKKYYDSIAVVQQQEEALKAKTEAAL 58

Query: 50  DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            NS   V     + AL          ++ ++N     +   KG +     L+ Y +    
Sbjct: 59  ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQDK 117

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
            +P++       + N  F          +         +   +      +  ++L   +A
Sbjct: 118 KTPVMLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
           + I F  T+   + YL       T                  + +     F  +     +
Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMEDKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
               +          K    +      W+   +++++SVFI  ++    S    +    +
Sbjct: 228 TYKVTGDNVDNLSAAKDDSQDLPGRIDWIAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287

Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWGW 338
            Y   +SA   T   P     T  + + G   F T+       ++   + R   L     
Sbjct: 288 GYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELHRLVYLGWPLI 347

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +        +  +      + GI +++ T+ VK+L +P   K Y+S+A M+ ++PKIDE
Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVLVYPATWKTYMSSAKMRVLKPKIDE 407

Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           + +K+ +       Q+ ++ LY  + ++P+ GC P+LLQ P+  A++  +  ++E+R   
Sbjct: 408 INKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513
            + W  DL+  D     T    +PF      H+ ++ ++M+++  +  K +    D    
Sbjct: 468 -FLWADDLSTYD--AFITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMSMQDTGAQ 521

Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
                   ++  MP++F+F L+ +P+GL  Y+  S +IS+    ++++    E  L+  L
Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRTTDETKLLAIL 580

Query: 571 RS 572
            +
Sbjct: 581 EA 582


>gi|330835990|ref|YP_004410631.1| Membrane protein oxaA [Spirochaeta coccoides DSM 17374]
 gi|329747893|gb|AEC01249.1| Membrane protein oxaA [Spirochaeta coccoides DSM 17374]
          Length = 604

 Score =  213 bits (541), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 121/548 (22%), Positives = 210/548 (38%), Gaps = 27/548 (4%)

Query: 30  IEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89
                 E   I  +   +Q  ++             S SP +  +N   I + +  GA  
Sbjct: 41  PVAEPLEEPAIHMISSTDQAWDTGLPGSFIAIGDNPSRSPFI-FENEEFIITFDPVGASV 99

Query: 90  DDLNLRGYHLDVSSNSPIVTLL---SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLIS 146
             + L+ +   +    P+  L    S  N    Y                 S        
Sbjct: 100 SSIKLKKH---LDGKEPVEMLFRSPSDHNAFLLYAGGDRTRPLDTVFSYSVSGNEVTFTR 156

Query: 147 GKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK 206
              +       L         F    + +  +  K+  T + N    + F      +  +
Sbjct: 157 NFAVVGEDGRALPGHFTLTKRFRFGGAGEYLFEIKVGATNSENKAVPLSFDNNAYTLAFE 216

Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266
           PQ       +       L  ++   ++      + I       SW  +  KY++ + IP 
Sbjct: 217 PQIGPAFEKLDNYNYRRLYIRNDGGKRTQPKLSNGIYQTTAGISWTAVVGKYFSVIAIPD 276

Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326
                 +  +   +     Q          +   S   T   + G +    +  Y K  +
Sbjct: 277 ATRYTTTLAERSDENSTVPQTSSIYLTRPAVRSASFEDTFLFYIGPQLKQNMDIYNKADS 336

Query: 327 IP------RFEMLIDWGWF-YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379
                     E ++D   +  ++   +  ++  FY ++ N+G+AI+L T+  ++L  PL 
Sbjct: 337 NSFQLSELHLEQVLDTSSWLGWLETILKGVLQLFYKVIPNYGVAIILLTLLTRVLMHPLN 396

Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
           KK   STA M  + P++DELR+K+  +P Q L +A   LY+   INPL GC P+LLQ P+
Sbjct: 397 KKSMASTARMSALSPQMDELRKKYADNP-QKLNEATAALYRKEKINPLGGCLPMLLQFPI 455

Query: 440 FFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
             A+Y +++   E+R A F  GWI DL+  D   + T    LPF       + I PI+ +
Sbjct: 456 MIALYGLLNKHFELRGAMFIPGWIPDLSVPD--TVLTFSFNLPFLGNQ---LHILPILYA 510

Query: 499 LSMFIQMKMSPPP------ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            SM   MK++P               ++  MP++  F L + P+GL++YWS  N+IS++Q
Sbjct: 511 TSMIFSMKLNPSSSGAAGSQASTMKFMMYGMPLILFFTLYNAPSGLLLYWSSVNLISMLQ 570

Query: 553 QAVIMKMH 560
           Q    K  
Sbjct: 571 QKFTNKKT 578


>gi|224539444|ref|ZP_03679983.1| hypothetical protein BACCELL_04349 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518949|gb|EEF88054.1| hypothetical protein BACCELL_04349 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 616

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 102/601 (16%), Positives = 225/601 (37%), Gaps = 47/601 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE---------RKNIQTVKQPNQVDN 51
           M+   N    + L  I++  +       + +    +         ++  + +K       
Sbjct: 1   MD--KNTITGLVLIAILLVGFSFLSRPSKEQLEAQQRYYDSIALVQQREEALKAKADAAL 58

Query: 52  SYAAVLIDDRAQALSMSPR------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
           +    +    + +L  + R      + ++N     +++ KG       L+ Y        
Sbjct: 59  ANEKDVETVDSTSLFFNARQGTDSLITIQNDVAELTLSTKGGSIFSAVLKEYME--QDKK 116

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             VTL + ++    +           N +       +   +      T  ++L   +A+ 
Sbjct: 117 TPVTLFTGNDVSMNFLFY--------NKKETIQTKDYYFTTVNRTDSTVTMRLSADSASY 168

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           I F+  +  + + +   +D            +        + +     +  +     +  
Sbjct: 169 IDFKYALHPNTYLVDFSIDAKGMADKLAASNNYVDIEWAQRARQIEKGYVYENRLSELTY 228

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
                   Y    K       E   W+   +++++SVFI   +         +    + Y
Sbjct: 229 KMLGNGTDYLSANKDDEKEVPERLDWIAFKNQFFSSVFIADADFEKTKLVSKMEREGSGY 288

Query: 286 QAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGWFY 340
              +SA   T   P     T  F + G   + T+       ++   + R   L      +
Sbjct: 289 IKDYSAEMSTSFDPTGKQPTQMFFYFGPNHYKTLTALDKGRDEKWELNRLVYLGWPLIRW 348

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   +  +      + GI ++L T+ VK + FP   K Y+S+A M+ ++PKIDE+ 
Sbjct: 349 VNKWFTINIFDWLSGWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKPKIDEIN 408

Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +K+ +       Q+ ++ +Y  + ++P+ GC P+L+Q PV  A++  +  ++E+R    +
Sbjct: 409 KKYPKQEDAMKKQQEVMGMYSQYGVSPMGGCLPMLVQFPVLIALFMFVPSAIELRQQS-F 467

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQ 516
            W  DL+  D          +PF      H+ ++ ++M++   +  K      D     Q
Sbjct: 468 LWADDLSTYD--AFINFPFNIPFLGS---HLSLFCLLMTVVNILNSKFMMQQQDTGANPQ 522

Query: 517 AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
              + WM    P++ +F L+S+P+GL  Y+  S +IS+V   +I++    E  L+ +L +
Sbjct: 523 MAAMKWMTYLMPIMMLFILNSYPSGLNYYYFISTLISVV-TTLILRKTTNEEKLLAQLEA 581

Query: 573 T 573
            
Sbjct: 582 R 582


>gi|160885689|ref|ZP_02066692.1| hypothetical protein BACOVA_03693 [Bacteroides ovatus ATCC 8483]
 gi|156108502|gb|EDO10247.1| hypothetical protein BACOVA_03693 [Bacteroides ovatus ATCC 8483]
          Length = 617

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 106/602 (17%), Positives = 225/602 (37%), Gaps = 50/602 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49
           M+   N    + L  I++  +         +            M  +++     K    +
Sbjct: 1   MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKKYYDSIAMVQQQEEALKAKTEAAL 58

Query: 50  DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            NS   V     + AL          ++ ++N     +   KG +     L+ Y +    
Sbjct: 59  ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQDK 117

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163
            +P++       + N  F          +         +   +      +  ++L   +A
Sbjct: 118 KTPVMLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
           + I F  T+   + YL       T                  + +     F  +     +
Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMEDKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
               +          K    +      W+   +++++SVFI  ++    S    +    +
Sbjct: 228 TYKVTGDNVDNLSAAKDDSQDLPGRIDWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287

Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWGW 338
            Y   +SA   T   P     T  + + G   F T+       ++   + R   L     
Sbjct: 288 GYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELHRLVYLGWPLI 347

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +        +  +      + GI +++ T+ VK+L +P   K Y+S+A M+ ++PKIDE
Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVLVYPATWKTYMSSAKMRVLKPKIDE 407

Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           + +K+ +       Q+ ++ LY  + ++P+ GC P+LLQ P+  A++  +  ++E+R   
Sbjct: 408 INKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513
            + W  DL+  D   I T    +PF      H+ ++ ++M+L+  +  K +    D    
Sbjct: 468 -FLWADDLSTYD--AIITFPFHIPFLGN---HLSLFCLLMTLTNILNTKYTMSMQDTGAQ 521

Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
                   ++  MP++F+F L+ +P+GL  Y+  S +IS+    ++++    E  L+  L
Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRTTNETKLLAIL 580

Query: 571 RS 572
            +
Sbjct: 581 EA 582


>gi|326336217|ref|ZP_08202389.1| inner membrane protein OxaA [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691726|gb|EGD33693.1| inner membrane protein OxaA [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 616

 Score =  212 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 116/614 (18%), Positives = 230/614 (37%), Gaps = 59/614 (9%)

Query: 1   MERNWN---YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           ME         + + L  II+  +   Y +   +          T  Q    DN   A +
Sbjct: 1   MEEKRTNIYSLIGMMLMFIILMYYM--YNHQPTKPNTQTSTKETTQVQKTSTDNVPTATI 58

Query: 58  IDDRAQ------------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99
             D  +                  +       E++N  L   ++ KG Q  +L ++    
Sbjct: 59  PTDSLELSKYQEQLGAFGYSAVLPSAKEGSYTEIENELLKLKVSNKGGQIIELLVKNQKT 118

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159
                   V L+  +N      +    ++T +N  L   +  +      +   T  +KL 
Sbjct: 119 YQG---KPVYLVKDNNA-----SFSIELATNDNRTLHTKDLYFEPS---LSGNTLSMKLK 167

Query: 160 FKNANNILFERTISLDEH--YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
                 + +   +  +E+          ++N             +   + + +       
Sbjct: 168 VSATQYLEYTYMLHPNEYLLDFSIHSVGLSNVLNTGKVPVLSWNLTARRMEKSVTYEDRY 227

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
              I    D    +      +       H    W+      ++S  I  K  +       
Sbjct: 228 VQAIVQYEDNRDDKLSAGGEDSEEFKQIH----WIDFKQHLFSSFLITDKPFATGKLSSK 283

Query: 278 LSDGHA----RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
                     R    FSA          I+ +   + G  ++  +  Y+K+  + +  + 
Sbjct: 284 NLANSEGENVRKTKDFSAVFPIAYNSGEISESLHFYYGPSDYHLLKKYDKEYELTK-AIP 342

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           + WG F +I K   + +  F +   + G+AI++ T+ V++L  P+  K Y+S A MK ++
Sbjct: 343 LGWGIFGWINKWFVIPVFDFLSKFMSMGLAIIVLTIIVRILLSPVQYKSYLSQAKMKVLR 402

Query: 394 PKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           P+I+E+  K+K        Q+  + LY    +NPL+GC P LLQ+PVFFA++     +  
Sbjct: 403 PEIEEINNKYKGQENAMKRQQETMALYSKAGVNPLSGCIPALLQMPVFFALFSFFPTAFM 462

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           +R    + W  DL++ D  +I  L   +PFY     HV ++PI+ S+++ I M M+    
Sbjct: 463 LRQES-FLWANDLSSYD--SIAQLPFSIPFYGN---HVSLFPILASVTLLIYMLMTAGQT 516

Query: 513 DKGQAM-------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
            + Q         ++   P++ +F  +++ +GL +Y+  SN+I+I     I      +  
Sbjct: 517 QQPQQEGMPNMKFMMYISPLMMLFFFNNYASGLSLYYFISNLITIFIMLAIKYWIIDDKR 576

Query: 566 LIDRLRSTFSKNYN 579
           +  +++    K   
Sbjct: 577 IHAKIQENKQKPRK 590


>gi|86140337|ref|ZP_01058896.1| putative inner membrane protein translocase component YidC
           [Leeuwenhoekiella blandensis MED217]
 gi|85832279|gb|EAQ50728.1| putative inner membrane protein translocase component YidC
           [Leeuwenhoekiella blandensis MED217]
          Length = 621

 Score =  212 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 112/602 (18%), Positives = 229/602 (38%), Gaps = 72/602 (11%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--------------KNIQTV 43
           ME         +   L   I+  +  +   P  EE+  ++              K  QT 
Sbjct: 1   MEEKKFDKQSMIGFLLIGAILL-FMLWQNQPTEEELAAQKAQEEQVEAQEAAAEKASQTD 59

Query: 44  KQPNQVDNSYAAVLID-----------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92
                      ++ ++                 +     EL+N  L   ++ KG    + 
Sbjct: 60  AVVESTTPQNDSLALERYKATLGSFAYSATLPSATDDVTELENDVLALKVSNKGGFITEA 119

Query: 93  NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152
            L+ +    S +S  V L+   N+        +   +  +    NS  ++   S      
Sbjct: 120 RLKNFK---SYDSVPVYLIKDGNS------RFNLTFSTTDNRTLNSENLYFEPSLSKEGE 170

Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFK----IVDTVTNNSIDQIRFSPRGRIMRHKPQ 208
              + +  K +++   E   +L               + N        +   ++  ++  
Sbjct: 171 NQVLSMKLKVSDSEYLEYRYTLTPDDYMMGFGIKTVGLQNVVNTSQPINLDWQLKGYRHA 230

Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268
            +               +    +      +            W      +++S+ +  + 
Sbjct: 231 KSITYENRYTRLTYEYEEGDHDKLD----QTGDDDAIETDVDWFNFRQHFFSSILLTDQP 286

Query: 269 TSFHSQFKYL----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324
                          +    Y  +++AN         +      + G  ++  +++Y++D
Sbjct: 287 FDEVRFSSKNLVEDEEVDTVYTKQYAANMTLKPVNGELNYAMDFYYGPTDYQILNNYDRD 346

Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG--IAIMLTTVFVKLLFFPLAKKQ 382
           +     +  +  GW  F     ++++ +F  L+  F   IAI+L T+ +KLL  P+  KQ
Sbjct: 347 I-----DEAMPLGWGIFGVINKYLIIPFFNFLIAYFPAGIAIILLTISIKLLLSPVQYKQ 401

Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
           Y+S   MK ++P+I+E+ EK+  +P +  Q+  ++LY     +PL+GC P LLQIPVF+A
Sbjct: 402 YLSQGKMKVLRPEINEINEKYADNPMKK-QQETMKLYSKAGASPLSGCIPGLLQIPVFYA 460

Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           ++     +  +RH   + W  DL++ D   I  L   +PFY     HV ++PI+ S+++F
Sbjct: 461 LFTFFPSAFALRHKS-FLWADDLSSYDK--IADLPFHIPFYG---DHVSLFPILASIAIF 514

Query: 503 IQMKMS--------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           I M M+          P       ++   P++ +F  +++ +GL +Y+  SN+I+I    
Sbjct: 515 IYMTMTTGQSMQQTQQPGMPNMKFLMYLSPIMMLFFFNNYASGLSLYYFISNLITIGIML 574

Query: 555 VI 556
           VI
Sbjct: 575 VI 576


>gi|332668063|ref|YP_004450851.1| membrane protein oxaA [Haliscomenobacter hydrossis DSM 1100]
 gi|332336877|gb|AEE53978.1| Membrane protein oxaA [Haliscomenobacter hydrossis DSM 1100]
          Length = 634

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 114/615 (18%), Positives = 214/615 (34%), Gaps = 48/615 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  I+  AWQ F    + +    +R      +     D+       + 
Sbjct: 1   MD--RNNIIGIALIFILFLAWQYFLAPSKTQIAAQQRAQDSIARVERLRDSLAIVKKQEA 58

Query: 61  RA--------------------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94
           R                            A+       L+N  +  + + KG +  D+ +
Sbjct: 59  REKIKAAAEVPDSVRTQMLGGQYGPFANAAVGKEETTVLENDLIKVTFSNKGGKIQDVLV 118

Query: 95  RGYHLDV---SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151
           + Y   V         + L    + KN +   L      N +   +     N     +  
Sbjct: 119 KKYFKMVQGEDRKDRKIPLHLLDDVKNRFEYTLPVKGLRNGVNTADLYFEVNNTGNSVTF 178

Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
                   +      L   T  LD    F+ +D V   S   I       + + +  T  
Sbjct: 179 RADAGNGQYFAQTYSLPSNTYKLDYRLEFEGMDQVFEASAKNITLKWVNYLDKIEKAT-- 236

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
             +  Q   +          +     E S          W+  +++++ S  +  K  + 
Sbjct: 237 -QYERQYSSLNFKAIDENSGRCSPTREYSEKDAEGAPIQWVANTNQFFNSSLLSEKGFTS 295

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSIT-TTNFLFAGAKEFPTIHHYEKDLAIPRF 330
                           +  +       G+S        + G  EF  +H      ++   
Sbjct: 296 AKMASKNLPEENEDLKELKSEIQVPFKGESSEQFAMHFYIGPNEFDRLHKM--GYSLSDV 353

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
                          +  L S+   L+ + GI I++ T  VKLL FPL  +   S + M 
Sbjct: 354 VPFGQNIMGTINRWVIRPLFSFLTWLISSKGIVILMLTFMVKLLLFPLTYRMIYSQSKMT 413

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            ++P+I+ L+E++     Q +Q   + +Y+   +NPL  C+P+LLQ+P++FA+Y+    S
Sbjct: 414 ALKPEIERLKERYGD-DQQKVQMETMSMYREFGVNPLGACFPMLLQLPIWFALYRFFPAS 472

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +E R A  + W  DL++ D    F L   +PF      H+ ++ ++  LS  +    +  
Sbjct: 473 IEFRQAS-FLWATDLSSYD--EFFQLPFNIPFGFGE--HISLFALLWVLSTLLYTWYNSK 527

Query: 511 PAD----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
             D         +   MPV+F+   +S  +GL  Y  +SN+++I Q     K    +   
Sbjct: 528 NMDFSANPSMLYMQYIMPVLFMGFFNSSASGLSAYMLFSNLLNIGQTLA-TKYFLIDEKK 586

Query: 567 IDRLRSTFSKNYNSQ 581
           +      + K    +
Sbjct: 587 LKLKMDDYRKKPKKK 601


>gi|149176568|ref|ZP_01855181.1| hypothetical protein PM8797T_30327 [Planctomyces maris DSM 8797]
 gi|148844681|gb|EDL59031.1| hypothetical protein PM8797T_30327 [Planctomyces maris DSM 8797]
          Length = 707

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 125/630 (19%), Positives = 226/630 (35%), Gaps = 94/630 (14%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS--------- 52
                  + + LS  +++ WQ F           +       K P   D           
Sbjct: 1   MEQKRLLLFVTLSASMLFFWQLFINPKIAPPPAAQNVVENDAKDPQGADAPLVAKKPDLP 60

Query: 53  -----YAAVLIDDRAQALSMSPRV----ELKNPS---LIGSINLKGAQFDDLNLRG--YH 98
                         A+ L    R      L   S   L   I+  GA   + +L    Y 
Sbjct: 61  GADKGAEVKPAPPEAELLKNPQRTILLGSLDPDSGYFLQTKISTTGASLVEAHLNDPLYR 120

Query: 99  LDVSSNSPIVTL--------------------------LSPSNTKNAYFAELDYVSTANN 132
              +   P+  L                          L+       +          + 
Sbjct: 121 DLNNPKQPLKILGEFAAGKDFKRSLDLNVAQLDAKLAALNTDCHSANWKVLELVKDPDDP 180

Query: 133 IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSI 191
               +         G I          +       F      D+  Y+      V N+S 
Sbjct: 181 KLYQSVLLSLTAPDGSIEVQKKYELKKYPVPEGKDFREFRDTDQAGYMVHFDIKVVNHSQ 240

Query: 192 DQIRFSPRGRIMRHKP-QTATNTFGVQEGFIAVLGDKSLVEQKYS-------DIEKSSIS 243
              +   +       P + A NT   ++  I  L D   VE +         ++    + 
Sbjct: 241 AAQKLDYQLLGPIGIPLENAENTRKYRDLRIGFLQDDKSVETEIFTAPDIIENVNAQQVE 300

Query: 244 NFHESNSWLGISDKYWASVFIPSK--------ETSFHSQFKYL-----------SDGHAR 284
            +  +  + G+  +Y+A++  P               S +               +  +R
Sbjct: 301 KYSRAFQYAGVDIQYFAALLTPDGKNYDPQLVNGEMQSNYSASIEPVLVQRGLRDETQSR 360

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
              + ++ ++ + PG  IT +  ++ G K    +        I         G F  +AK
Sbjct: 361 ITVQVNSKDLDLAPGGDITHSYAMYTGPKRESLLGPPLNATEIMDL------GIFGPVAK 414

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
            M  L++  +    ++GIAI+  T+ V+   +PL++KQ +    MK +QP+I EL++K+ 
Sbjct: 415 LMLWLLTTLHGFGLSYGIAIICLTIIVRGSLYPLSRKQAIGAQKMKELQPQIAELKKKYG 474

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               + L +A ++L+  +N NPLAGC PI +Q+P+FF +Y  ++ ++++R  P + W+ +
Sbjct: 475 DDREK-LGRAQMELFSKNNYNPLAGCLPIFMQLPIFFGLYTALNNAVQLRGTP-FLWVDN 532

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQA---MIL 520
           LAA D   +F +   +PF    F    + PI+      +Q K+  PPP DK Q     I+
Sbjct: 533 LAAPD--ALFQMPFAIPFLGDQF---NLLPIVTVGLFVMQQKLFMPPPTDKDQELQHKIM 587

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           N+M +   F     PAGL +Y+  S++  I
Sbjct: 588 NYMMIGMGFMFYHVPAGLCVYFIASSLWGI 617


>gi|300727271|ref|ZP_07060687.1| putative membrane protein [Prevotella bryantii B14]
 gi|299775509|gb|EFI72103.1| putative membrane protein [Prevotella bryantii B14]
          Length = 641

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 109/616 (17%), Positives = 231/616 (37%), Gaps = 52/616 (8%)

Query: 4   NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY---------- 53
           N N    I L  +++  +  +Y  P  EE+  +++ +   ++  +               
Sbjct: 2   NKNNITGIVLIALLIIGYG-WYTQPSEEEIKAQQEQLAKQEEAKKKTEKAFKDAEKAKQE 60

Query: 54  -------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------LD 100
                          +     +  V L N  +  ++N KGA  +   ++ Y        D
Sbjct: 61  AAKAKILEDTTALFHSALNGKAQTVTLHNDKIELTLNTKGATVEKAVIKNYVGHNIQVKD 120

Query: 101 VSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158
            S +   VTL    +    +   A+   + T+      +  T   ++      P   IKL
Sbjct: 121 GSKDQDKVTLFDQKDQALKFMLSAKEANIVTSELYFTASEVTDSTVVFTAEAAPGKNIKL 180

Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218
            +    + +    +S++        +T T +     R   + R    + + AT T+    
Sbjct: 181 SYVLGKDYMLHMQLSVNGMSGIFAPNTNTMDVDWAERCRQQERGFSFENRYATLTY--HN 238

Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
                       E               E   W+   +++++SV I   +   ++    +
Sbjct: 239 TEGGTDYLNETKEAIDEK--------IEEKVDWVAFKNQFFSSVMIAKNDFQENALMTSI 290

Query: 279 SDGHARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEML 333
                    K    ++     P     +    + G  +F  +   E +    +    + L
Sbjct: 291 PQDKESGYLKQYQAKLKTFFDPTGKQPSEFDFYYGPNDFRLLQKVESESNFGKDLELQRL 350

Query: 334 IDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           +  GW  F     +  +  F  L  V   GI ++L T+ +K++ +P+ KK Y+S+A M+ 
Sbjct: 351 VYLGWPLFRIINRWFTLYVFDWLSQVFPMGIVLILITLLLKVITYPMVKKSYMSSAKMRV 410

Query: 392 IQPKIDELREKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           ++PK++E  +++ +   Q   Q+AM+  Y  + ++PL+GC P+L+Q+P++ A++  +  +
Sbjct: 411 LKPKLEEATKQYDKPEDQMKKQQAMMAEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNA 470

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMKMS 508
           +++R    + WI DL+  DP   +     +         +      I+ S     Q K  
Sbjct: 471 IQLRGES-FLWINDLSTYDPIFEWGTNLWMLGDHISLTCILFCGANILYSWFTMQQQKDQ 529

Query: 509 PPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
                  Q  ++ W    MP++F F  + + AGL  Y+  S   S      + +    + 
Sbjct: 530 MVGQQAEQMKMMRWMMLLMPLMFFFMFNDYSAGLNFYYFVSLFFSAAIMWTL-RKTTNDE 588

Query: 565 GLIDRLRSTFSKNYNS 580
            L+  L + + +N  +
Sbjct: 589 KLLQILEARYKENKTN 604


>gi|332293587|ref|YP_004432196.1| membrane protein insertase, YidC/Oxa1 family [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332171673|gb|AEE20928.1| membrane protein insertase, YidC/Oxa1 family [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 628

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 110/610 (18%), Positives = 222/610 (36%), Gaps = 64/610 (10%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA- 64
           N  + + L   I+  W  ++  P  EE+  ++       Q  + D +   V+    A A 
Sbjct: 8   NSLIGMLLMGGILV-WIIYFNKPTPEEIEAQKAAQTEQLQETEDDVAALPVMDAAPAIAT 66

Query: 65  -----------------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
                                          + N  L   ++ KG    ++ L  +    
Sbjct: 67  DSLSNVALQNRLGTFAYSGSLPSAKEGATTTIANDVLELKVSNKGGYITEVKLLKHSTF- 125

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161
             +S  V L+   N+      + +   +  +    N+  ++   +         + +  K
Sbjct: 126 --DSIPVYLIKDGNS------QFNVSFSTADNRNLNTKDLFFEPTLSKNGGNDVLSMKLK 177

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
            + +   E    L E          +     ++  S   R+               E   
Sbjct: 178 VSPSEYLEYRYELKEGDYMMDFGMKSQGLSSRLNTSNPMRMQWDFKGMRHARSQSYENRY 237

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL--- 278
             L  K   ++              E   W+     +++S+ I                 
Sbjct: 238 TRLTYKYEEDKTDKLSPAGDDDEIEEDLVWMNYRQHFFSSMLISKTPFKEARLSSTDLYK 297

Query: 279 ----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
                D    +  ++ ++ +       +     ++ G  ++  +  Y++ L      M +
Sbjct: 298 EADDRDEATIFTKEYKSDVLLEAKNGELDYAMQMYYGPTDYTILKSYDQGLDEA---MPL 354

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            WG F F+ K + +    F       GIAI++ T+ +KLL  P+  KQY S A MK ++P
Sbjct: 355 GWGIFGFLNKYLVIPFFAFLTGFLPAGIAIIVMTISIKLLLSPVQYKQYTSQAKMKILKP 414

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           +I  + EK K +  +  Q+  + LY     +P AGC P LLQIPVF+A++     + ++R
Sbjct: 415 EIAAISEKHKDNAMKK-QQETMALYSKAGASPAAGCLPALLQIPVFYALFTFFPSAFDLR 473

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPP 511
               + W  DL++ D   I  L   +PFY     HV ++PI+ ++++F  M++   +   
Sbjct: 474 GKS-FLWADDLSSYD--EIAKLPFEIPFYG---DHVSLFPILAAVTIFFSMRLTTGNQQM 527

Query: 512 ADKGQAMI----------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
               Q  +          + + P++ +   + + +GL +Y+  SN+++I    VI     
Sbjct: 528 QQPTQEGMPDMSKMMKYMMYFSPLLMLVFFNQYASGLSLYYFISNLLTIGIILVIKNFII 587

Query: 562 AEIGLIDRLR 571
            E  +  ++ 
Sbjct: 588 DEEKIKAKIE 597


>gi|304382921|ref|ZP_07365403.1| inner membrane protein OxaA [Prevotella marshii DSM 16973]
 gi|304335946|gb|EFM02194.1| inner membrane protein OxaA [Prevotella marshii DSM 16973]
          Length = 631

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 107/614 (17%), Positives = 237/614 (38%), Gaps = 51/614 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  +   L   ++  +  +Y  P  EE+  +           Q          D 
Sbjct: 1   MD--KNTIIGFVLIAAVLIGFS-WYSQPSAEEIAAQHTQDSLTLVAKQRAEKQQKAAEDA 57

Query: 61  RAQALSM-----------------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
           R + L+                  +  + LKN  +  +++ KG       ++ +     +
Sbjct: 58  RKKTLTSVAKEDTTVLFYASMKGTAQNIVLKNSKVELTLSTKGGTVAKAVIKNFKDHNGN 117

Query: 104 NSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161
               VTL +  + +  +    +   + T +    P+  T   +           I L + 
Sbjct: 118 KD--VTLFTEKDQRLNFLLAGKNSNIITEDLFFTPSQVTDSTVTMTATTGRGQAIVLHYL 175

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
              + +   ++ ++           + +     +   + R    + + +T T+ + +G  
Sbjct: 176 LGKDYMLHASMQVNGMADLFAPTYRSMDVEWTDKARQQERGFTFENRYSTLTYHLTKGGT 235

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET-SFHSQFKYLSD 280
             L   S  + +             E+  W+   ++++++V I   +            +
Sbjct: 236 DYLNATSEKKDE----------PVEETIDWIAFKNQFFSAVMIAKNDFAPNSLMTSIPQE 285

Query: 281 GHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDW 336
             + Y   ++A   T   P     T    + G  +F  +   E+     +    + L+  
Sbjct: 286 KGSGYLKDYAAKAKTFFDPTGKTPTEFEFYFGPNDFRLLQSIEQQSKFGKDLELQRLVYL 345

Query: 337 GWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           GW  F     +  +  F  L     N GI ++L T+ +KL+ FPL KK Y+S+A M+ ++
Sbjct: 346 GWPLFRIINRWFTLYVFDGLTAMNINMGIVLILITLLLKLITFPLVKKSYMSSAKMRVLK 405

Query: 394 PKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           PK+DE  +++ +   Q+  Q+AM+ +Y  + ++PL+GC P+L+Q+P++ A++  +  +++
Sbjct: 406 PKLDEATKQYDKPEDQMQKQQAMMTMYSKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQ 465

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKMSPP 510
           +R    + WI+DL+  DP   +     L         +   +  ++ S+    Q +    
Sbjct: 466 LRGES-FLWIQDLSTYDPIWEWHDSLWLIGDHLSLTCILFCVANVLYSIMTMRQQRDQMV 524

Query: 511 PADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
                Q      ++  MPV+F F  + + +GL  Y+  S   S      + +    +  L
Sbjct: 525 GQQAEQMKVMQYMMYVMPVMFFFMFNDYSSGLNFYYFVSLFFSAAIMWAL-RRTTNDEKL 583

Query: 567 IDRLRSTFSKNYNS 580
           +  L + + +N N+
Sbjct: 584 LAILEANYQENKNN 597


>gi|150025942|ref|YP_001296768.1| inner membrane protein translocase component YidC [Flavobacterium
           psychrophilum JIP02/86]
 gi|149772483|emb|CAL43966.1| Inner membrane protein OxaA [Flavobacterium psychrophilum JIP02/86]
          Length = 633

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 113/615 (18%), Positives = 230/615 (37%), Gaps = 56/615 (9%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEE----MNNERKNIQTVKQPNQVDNSY 53
           ME+     N  +   L   I+  W  +   P   E       E       +      NS 
Sbjct: 1   MEKKKLDLNSIIGFVLIFGIMM-WIMYQNKPTQAEIDKKAKQELTEKTKSEANQVAKNSQ 59

Query: 54  AAVLIDDRAQ-----------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96
             +L  D  Q                   + S    L+N  L+  I  KG    +  L+ 
Sbjct: 60  KTILPTDSVQVAKMKATLGSFAYSATLPSAKSEFTTLENELLVLKIANKGGYIAEATLKN 119

Query: 97  YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156
           +      +  +V L+  +N      A L+      +    N+  ++   +   +     +
Sbjct: 120 FKQISKDSGKLVQLIKDNN------AGLNITLQTQDNRTLNTKDLFFEPTLTKVGTNQIL 173

Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216
            +  K   N   E    L  +      D  +      +  +    +        +     
Sbjct: 174 SMKLKAGANQFLEYKYVLKPNDYMLDFDVHSQGLASVLNTTKPADLEWDLKSYRSEKSIS 233

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
            E     +  +    +  +  +        +  +++     +++S+ + +        + 
Sbjct: 234 NENRFTDIRYEYEDGKHNNVGQGKDKEETLDKVTYVAFKQHFFSSILLTNTPFEKAKLYS 293

Query: 277 YL----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
                   G   Y   F AN         +      + G  ++  +  Y K+L      +
Sbjct: 294 SNVVDEEKGDTIYTKHFKANVPLAFNNGEVDYKMNWYYGPSDYKLLKDYHKNLEKI---I 350

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
            + WG F +I   +FM +  F +   + GIAI++ TV +K+   P+  K ++S A MK +
Sbjct: 351 PLGWGIFGWINMFIFMPLFGFLSSYISLGIAIIVFTVIIKIAMSPITYKSFLSQAKMKVL 410

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           +P+I+EL EKF + P +  Q+  ++LY    +NP+AGC P L+QIP  +A ++    ++E
Sbjct: 411 RPEINELNEKFSKDPMKK-QQETMKLYNKAGVNPMAGCIPALIQIPFMYASFQFFPSAIE 469

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMS--- 508
           +R    + W +DL++ D   + +    +P     +  HV ++ ++ ++++F   KM+   
Sbjct: 470 LRQKG-FLWSQDLSSFD--TVLSWKQHIPIISSVYGNHVSLFALLAAIAIFFYTKMTAGD 526

Query: 509 PPPADKGQ------AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                  Q      A I+  M    P++ +   +++ +GL +Y   SNVI+I    VI +
Sbjct: 527 QQMQAPQQEGMPDMAKIMKMMLYISPIMMLIFFNNYGSGLSLYTLISNVITIGIMFVIKR 586

Query: 559 MHGAEIGLIDRLRST 573
                  +  +++  
Sbjct: 587 YIVDNDKIHAQIQEN 601


>gi|283954517|ref|ZP_06372036.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
           414]
 gi|283793921|gb|EFC32671.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni
           414]
          Length = 454

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 125/493 (25%), Positives = 235/493 (47%), Gaps = 53/493 (10%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN 131
           ++++      I+  G +     L+      +     + L++  N+   Y  E+ +   + 
Sbjct: 4   KVQSKHFEAQIDSFG-RISAFYLKD-KKYQNDKGEFINLINKENS--PYPLEMRFSDPSV 59

Query: 132 NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSI 191
           N E   +  V N+ +  +    + +  + +N + +  E+ I+      ++I   ++ N+ 
Sbjct: 60  NSEAFKTPYVANINNLFVDENGSQVLKLTQNLSGLKIEKNITFYAKGSYEIEVKLSKNAN 119

Query: 192 DQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251
                        ++P  A +++ V    +    +     +     +  S++N   ++++
Sbjct: 120 -------YFISPGYRPNIAVDSYTVHGALVMDSKETIETYEDGDVEKDESVNNVVMTSAF 172

Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311
               D+Y+A+             F           +K S     +            + G
Sbjct: 173 ----DRYYAT------------FFYNFDKPLNVVISKDSNKNPIVFAYSDNEFKAGGYIG 216

Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371
           +KE   +   +     PR E ++++GWF FIAKPMF  + + +  +GN+G AI++ T+ V
Sbjct: 217 SKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLDFLHQYIGNWGWAIVVMTLIV 271

Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431
           +++ FPL  K  +S   +K++ PK+ ++RE++K   PQ +   M++LYK H  NP++GC 
Sbjct: 272 RIVLFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYKKHGANPMSGCL 330

Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491
           PILLQIP+FFAIY+V+  ++E++ AP+  W+ DL+  DP                     
Sbjct: 331 PILLQIPIFFAIYRVLLNAIELKAAPWAFWVHDLSVMDPYF------------------- 371

Query: 492 IWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           I PI+M  +MF+Q  ++P    D  QA I+ ++PV+F F   +FPAGL +YW  +N+ S+
Sbjct: 372 ILPILMGATMFLQQLITPMAIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFINNLCSL 431

Query: 551 VQQAVIMKMHGAE 563
           VQQ VI K+   E
Sbjct: 432 VQQWVINKIFAKE 444


>gi|162450792|ref|YP_001613158.1| inner-membrane protein [Sorangium cellulosum 'So ce 56']
 gi|161161374|emb|CAN92679.1| probable inner-membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 594

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 117/594 (19%), Positives = 230/594 (38%), Gaps = 78/594 (13%)

Query: 10  AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSP 69
            + L + I+  +Q  +  P +   +  +       QP  V++S A          +    
Sbjct: 9   WLFLGLAIILFFQ--FGKPLLFGESAPQ------LQPLDVNDSTAPAERAPPEMCV---- 56

Query: 70  RVELKNPSLIGSINLKGAQFDDLNL--RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127
              +        ++  G     L +    Y          + L++ S           ++
Sbjct: 57  ---IDGDRFKAELSTHGGSLRHLWMTDPKY-TTGDGERRPMDLVTTSLESRMPLRTDLHL 112

Query: 128 STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVT 187
              +  ++P  +  W L +             + + +  L +   +    +   +  TV 
Sbjct: 113 PGGSAQQVPFDDLDWKLSA----QDGKSCTFTYVDDSTRLTKVVAATGRPFELSVQMTVE 168

Query: 188 NNSIDQI-------RFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS-----LVEQKYS 235
           N + +         + S R +          + +  +         +           + 
Sbjct: 169 NLAQEPRKHRLAVEQTSWRTQKETEGHLGMISEWITETVAATDQKTERQLPDAFEPGDFK 228

Query: 236 DIEKSSISN--FHESNSWLGISDKYWASVFIPSKETSFHS---------------QFKYL 278
           D E ++        +  +  +S  Y++ + IP +     +                    
Sbjct: 229 DPEFTAERWRRTPGNARFAAVSSSYFSKIAIPLEGPGQPTAETQIEDIWESSKFQDKSKD 288

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
            +    Y+A+ +  E  + PG ++T     F G KE   +   +  ++      +I+ GW
Sbjct: 289 PNFGHVYRARLAYPEHELAPGGAVTYKLLSFTGPKERDLLAAVDHGVS-----EVINLGW 343

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           F  IAK +   +   Y  VG++G AI+L T+ V+LL FPL+ +Q  S A M+ ++P++DE
Sbjct: 344 FSPIAKLLVSYLYVLYGAVGSWGWAIVLLTITVRLLLFPLSIQQIKSAAAMRKLKPEMDE 403

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNI-NPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +  ++K    Q    AM +L++ + + NP+ GC+P+LLQ+PV+FA+Y  +  ++E+ H P
Sbjct: 404 INARYKDDAAQRGL-AMQELWRKNKVANPVVGCFPMLLQMPVWFALYTALQTAVELYHTP 462

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           F   I DL+A                        I PI++  S FIQ K+ PP  D  Q 
Sbjct: 463 FGPVIPDLSAPGRYY-------------------IIPIVLGGSSFIQQKLMPPQGDPAQQ 503

Query: 518 MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
            ++ + MP +F   +   PAGL +Y   +  + I QQ ++ +   A+      +
Sbjct: 504 KMMLYLMPGIFTAMMLFLPAGLGVYMLTNTWLGIGQQVLVERYLKAKNERAGGI 557


>gi|255691546|ref|ZP_05415221.1| inner membrane protein OxaA [Bacteroides finegoldii DSM 17565]
 gi|260622938|gb|EEX45809.1| inner membrane protein OxaA [Bacteroides finegoldii DSM 17565]
          Length = 617

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 104/603 (17%), Positives = 228/603 (37%), Gaps = 52/603 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N    + L  I++  +  F   P  E++  +++   ++    Q + +  A     
Sbjct: 1   MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKRYYDSIALVQQQEEALKAKTEAA 57

Query: 61  RAQALSM------------------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
            A +                       +V ++N     +   KG +     L+ Y +   
Sbjct: 58  LANSKKEAASAADSSSLFFNALQGTDSKVSIQNNVAEITFTTKGGRVYSAMLKDY-MAQD 116

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
             + +V       + N  F   +      +         +          +  ++L   +
Sbjct: 117 KKTSVVLFDGDDASMNFNFYNKEGAIQTKD---------YFFEVANKTDSSVVMRLAADS 167

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
           A+ I F  T+   + YL       T  +      +        + +     F  +     
Sbjct: 168 ASYIDFIYTLK-PDSYLMNFEIKATGMTDKLANTNYVDIDWSQRARQLEKGFTYENRLAE 226

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
           +       +       K           W+   +++++SVFI  ++    S    +    
Sbjct: 227 LTYKIKGDDVDNLSAAKDDSKTLESRIDWVAFKNQFFSSVFIAEQDFDKVSVKSRMEQQG 286

Query: 283 ARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWG 337
           + Y   +SA   T   P     T  + + G   F T+       ++   + R   L    
Sbjct: 287 SGYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELNRLVYLGWPL 346

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
             +        +  +      + GI +++ T+ VK++ +P   K Y+S+A M+ ++PKID
Sbjct: 347 IRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKID 406

Query: 398 ELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           E+ +K+ +       Q+ ++ LY  + ++P+ GC P+LLQ P+  A++  +  ++E+R  
Sbjct: 407 EINKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQ 466

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--- 513
             + W  DL+  D   I T    +PF      H+ ++ ++M+++  +  K +    D   
Sbjct: 467 S-FLWADDLSTYD--AIITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMSMQDNGA 520

Query: 514 ----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
                    ++  MP++F+F L+ +P+GL  Y+  S +IS+    ++++    E  L+  
Sbjct: 521 QPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRKTTDETKLLAI 579

Query: 570 LRS 572
           L +
Sbjct: 580 LEA 582


>gi|260911838|ref|ZP_05918405.1| inner membrane protein OxaA [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260634049|gb|EEX52172.1| inner membrane protein OxaA [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 627

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 115/609 (18%), Positives = 234/609 (38%), Gaps = 50/609 (8%)

Query: 4   NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
           N N  +   L  +++  +  +   P  EE+  +++  Q  K+  +      A    +RAQ
Sbjct: 2   NKNNLIGFILIGLVLVGFSLW-NRPSEEELAKQQQKEQIEKKNKEEQTKAKAKTDAERAQ 60

Query: 64  ALSMS----------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107
           AL  +                  + LKN  L   ++ KG   D   +  +     +    
Sbjct: 61  ALQQATTDTSALFHKALTGEAKSIVLKNSKLQLQLSTKGGVVDKAVISNFTDRNGNKDLT 120

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167
           +      +    +  +  YVSTA+     +  T   +           + + +   N  +
Sbjct: 121 LFQGKDQSLTYTFATKDGYVSTADLFFTASDVTDTTVTFTAEAAAGKTLTIKYVLGNEYM 180

Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227
              +IS             T +   Q R + + +    + + A+ T+   EG    L + 
Sbjct: 181 LHTSISATGMGGILNPSINTVDINWQERCAQQEKGFTFESRYASLTYHNTEGGTDYLSET 240

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
           S    +             +   W+   ++++++V I   +   ++    +         
Sbjct: 241 SEKIDE----------VIEDKIDWVAFKNQFFSAVMIAKTDFGTNATLTSIPQEKGSGYL 290

Query: 288 KFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWFYFI 342
           K    ++  T  P  +  T    + G  +F  +   E      +    E L+  GW  F 
Sbjct: 291 KQYQAKLKTTFDPTGAQPTQLDFYYGPNDFRLLQKMESQSHFGKDLELERLVYLGWPLFR 350

Query: 343 AKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
               +  +  F  L     N G+ ++L T+ +K + FPL KK Y+S+A M+ ++PK++E 
Sbjct: 351 IINRWFTLYVFDWLTGLDINMGVVLILITLLLKFITFPLVKKSYLSSAKMRVLKPKLEEA 410

Query: 400 REKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
            ++F +   Q   Q+AM+  Y  + ++PL+GC P+L+Q+P++ A++  +  ++++R    
Sbjct: 411 TKEFNKPEDQMKKQQAMMSEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGES- 469

Query: 459 WGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           + WI DL+  DP      NI+ +   L      F    +   +M      Q +       
Sbjct: 470 FLWIDDLSTYDPVLEWGHNIWLIGDHLSLTCILFCLSNVLYSMM---TMRQQRDQMVGQQ 526

Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
             Q  ++ WM    PV+F F  + + +GL  Y+  S   S      + +    +  L+  
Sbjct: 527 AEQMKMMQWMMYLMPVMFFFMFNDYSSGLNFYYFVSLFFSAAIMWFL-RKTTNDEKLLSS 585

Query: 570 LRSTFSKNY 578
           L + + +  
Sbjct: 586 LEANYKEAQ 594


>gi|323345690|ref|ZP_08085913.1| inner membrane protein OxaA [Prevotella oralis ATCC 33269]
 gi|323093804|gb|EFZ36382.1| inner membrane protein OxaA [Prevotella oralis ATCC 33269]
          Length = 629

 Score =  211 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 113/612 (18%), Positives = 246/612 (40%), Gaps = 48/612 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  +   L  ++++ +  +      E     RK+     +  + +       +  
Sbjct: 1   MD--KNNIIGFVLIAVVLFGYTWWSQPSAEERAAAVRKDSVAAAEKEKAEILKKQKTLQM 58

Query: 61  RAQA----------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
           +A++                   S ++ LKN  L  ++N KGA  +   +RG+     + 
Sbjct: 59  QAESKEKELEDTSALFHAALQGQSEKIILKNNKLELTLNSKGATVEKAVIRGFKDR--NG 116

Query: 105 SPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
           +  VTL   ++    Y   A+   +STA+   +P+  T   +           I L ++ 
Sbjct: 117 NANVTLFDAADQYMNYTLTAKETNISTADLFFVPSDVTDSTVTFTAQAGNGKNITLAYRL 176

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
             + L    +S++        +T T +   + +   + +    + + AT T+   EG   
Sbjct: 177 GTDYLLSMKMSVNGMAGLFAPNTNTMDVDWKDKCRQQEKGFTFENRYATLTYHNVEGGTD 236

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
            L +            ++      +   W+   ++++++V I     S +S    +    
Sbjct: 237 YLNETK----------ENVDETIEDKIDWVAFKNQFFSAVMIAKNNFSANSMMTSIPQEK 286

Query: 283 ARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWG 337
                K    ++     P   + +    + G  +F  +   E +    +    + L+  G
Sbjct: 287 GSGYLKQYEAKMKTFFDPSGKMPSEFEFYYGPNDFRLLQRIETESTFGKDLQLQRLVYLG 346

Query: 338 WFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           W  F     +  +  F  L  V   G+ +++ T+ +KL+ +P+ KK Y+S+A M+ ++PK
Sbjct: 347 WPLFRIINRWFTIYVFDWLSKVFPMGVVLIMITLLLKLITYPMVKKSYMSSAKMRVLKPK 406

Query: 396 IDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           +D    +F +   Q+  Q+AM+  Y  + ++PL+GC P+L+Q+P++ A++  +  ++++R
Sbjct: 407 LDAATAQFNKPEDQMQKQQAMMSEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLR 466

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKMSPPPA 512
               + WIKDL+  DP   +     L         +   +  ++ S     Q +     A
Sbjct: 467 GQS-FLWIKDLSTYDPIWEWGHNIWLIGDHLSLTCILFCVANLLYSWMTMRQQRDQMVGA 525

Query: 513 DKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
              Q  ++ W    MPV F F  + + +GL  Y+  S   S      + +    +  L+ 
Sbjct: 526 QAEQMKMMQWMMYLMPVFFFFMFNDYSSGLNFYYFISLFFSAAIMWAL-RKTTNDEKLLA 584

Query: 569 RLRSTFSKNYNS 580
            L + + +N ++
Sbjct: 585 TLEARYKENKDN 596


>gi|189466153|ref|ZP_03014938.1| hypothetical protein BACINT_02523 [Bacteroides intestinalis DSM
           17393]
 gi|189434417|gb|EDV03402.1| hypothetical protein BACINT_02523 [Bacteroides intestinalis DSM
           17393]
          Length = 616

 Score =  211 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 106/601 (17%), Positives = 222/601 (36%), Gaps = 47/601 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-----RKNIQTVKQPNQVDNSYAA 55
           M+   N    + L  I++  +       + +    +        +Q  ++  +     A 
Sbjct: 1   MD--KNTITGLVLIAILLVGFSFLSRPSKEQLEAQQRYYDSIALVQQREEALKAKADAAL 58

Query: 56  VLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
               D     S S            + ++N     +++ KG       L+ Y        
Sbjct: 59  ANEKDVETVDSTSLFFNALQGTDSLITIQNDVAELTLSTKGGSIFSAVLKEYME--QDKK 116

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             VTL + ++    +           N +       +   +      T  ++L   +A+ 
Sbjct: 117 TPVTLFTGNDVSMNFLFY--------NKKETIQTKDYYFTTVNRTDSTVTMRLSADSASY 168

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           I F+  +  + + +   ++            +        + +     +  +     +  
Sbjct: 169 IDFKYALHPNTYLVDFSIEAKGMTDKLAASNNYVDIEWAQRARQIEKGYVYENRLSELTY 228

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
                   Y    K       E   W+   +++++SVFI   +         +    + Y
Sbjct: 229 KFMGDGTDYLSANKDDEKEVPERLDWIAFKNQFFSSVFIADTDFEKTKLVSKMEREGSGY 288

Query: 286 QAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWGWFY 340
              +SA   T   P     T  F + G   + T+   +K       + R   L      +
Sbjct: 289 IKDYSAEMSTSFDPTGKQPTQMFFYFGPNHYKTLTALDKGRSEKWELNRLVYLGWPLIRW 348

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   +  +      + GI ++L T+ VK + FP   K Y+S+A M+ ++PKIDE+ 
Sbjct: 349 INKWFTINIFDWLSGWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKPKIDEIN 408

Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +K+ +       Q+ M+ +Y  + ++P+ GC P+L+Q PV  A++  +  ++E+R    +
Sbjct: 409 KKYPKQEDAMKKQQEMMGMYSQYGVSPMGGCLPMLVQFPVLIALFMFVPSAIELRQQS-F 467

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQ 516
            W  DL+  D          +PF      H+ ++ ++M+L   +  K      D     Q
Sbjct: 468 LWADDLSTYD--AFINFPFNIPFLGS---HLSLFCLLMTLVNILNSKFMMQQQDTGANPQ 522

Query: 517 AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
              + WM    P++ +F L+S+P+GL  Y+  S +IS+V   +I++    E  L+ +L +
Sbjct: 523 MAAMKWMTYLMPIMMLFILNSYPSGLNYYYFISTLISVV-TTLILRKTTNEEKLLAQLEA 581

Query: 573 T 573
            
Sbjct: 582 R 582


>gi|29345999|ref|NP_809502.1| putative inner membrane protein translocase component YidC
           [Bacteroides thetaiotaomicron VPI-5482]
 gi|253568600|ref|ZP_04846011.1| inner membrane protein oxaA [Bacteroides sp. 1_1_6]
 gi|298387394|ref|ZP_06996947.1| inner membrane protein OxaA [Bacteroides sp. 1_1_14]
 gi|38502986|sp|Q8AA76|OXAA_BACTN RecName: Full=Inner membrane protein oxaA
 gi|29337893|gb|AAO75696.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251842673|gb|EES70753.1| inner membrane protein oxaA [Bacteroides sp. 1_1_6]
 gi|298260063|gb|EFI02934.1| inner membrane protein OxaA [Bacteroides sp. 1_1_14]
          Length = 618

 Score =  211 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 102/603 (16%), Positives = 222/603 (36%), Gaps = 51/603 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N    + L  I++  +      P  E++  ++K   ++    Q   +  A     
Sbjct: 1   MD--KNTITGLVLIGILLVGFSYL-SRPSEEQIAAQKKYYDSIAVVQQQQEALKAKTEAA 57

Query: 61  RAQALS------------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102
            A                         +V ++N     +   KG +     L+ Y     
Sbjct: 58  LANENKGAAAAADSSALFFNAMHGTDSKVSIQNSVAEITFTTKGGRVYSAMLKEYK--GQ 115

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
             +  V L    +   ++           N +       +   +      +  ++L   N
Sbjct: 116 DKTNPVVLFDGDDATMSFNFY--------NKQGAIQTKDYYFEAVNKTDSSVTMRLAADN 167

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
           A+ I F  T+  + + +   +                    +   Q              
Sbjct: 168 ASYIDFIYTLKPNSYLMNFEIKATGMEGKLASTEYVDIDWTQRARQLEKGFTYENRLSEL 227

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
               K       S  +       + +  W+   +++++SVFI  ++ +  S    +    
Sbjct: 228 TYKVKGDNVDNLSAAKDDEKDLGNTAIDWVAFKNQFFSSVFIADQDFNKVSVKSRMEQQG 287

Query: 283 ARYQAKFSANE-ITILPGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWG 337
           + Y   +SA       P     T  + + G   F T+   +K       + R   L    
Sbjct: 288 SGYIKDYSAEMSTFFDPSGKQPTEMYFYFGPNHFKTLKALDKGRTEKWELNRLVYLGWPL 347

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
             +        +  +      + GI +++ T+ VK++ +P   K Y+S+A M+ ++PKID
Sbjct: 348 IRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKID 407

Query: 398 ELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           E+ +K+ +       Q+ ++ LY  + ++P+ GC P+LLQ P+  A++  +  ++E+R  
Sbjct: 408 EINKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQ 467

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--- 513
             + W  DL+  D     T    +PF      H+ ++ ++M+++  +  K +    D   
Sbjct: 468 S-FLWADDLSTYD--AFITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMTMQDTGA 521

Query: 514 ----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
                    ++  MP++F+F L+ +P+GL  Y+  S +IS+    ++++    E  L+  
Sbjct: 522 QPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRKTTDETKLLAI 580

Query: 570 LRS 572
           L +
Sbjct: 581 LEA 583


>gi|163755913|ref|ZP_02163030.1| putative inner membrane protein translocase component YidC [Kordia
           algicida OT-1]
 gi|161324084|gb|EDP95416.1| putative inner membrane protein translocase component YidC [Kordia
           algicida OT-1]
          Length = 640

 Score =  210 bits (534), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 119/623 (19%), Positives = 234/623 (37%), Gaps = 70/623 (11%)

Query: 8   FVAIALSVIIVYAW-----------------QNFYVYPRIEEMNNERKNIQTVKQPNQVD 50
           F+ +AL  +I   W                 +        ++      N       N  D
Sbjct: 12  FIGLALIALIAVYWYNSTKPTEEEIAAAEAEKAKMEQVVKQDSITAATNATKETILNLSD 71

Query: 51  NSYAAVLIDD------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR------GYH 98
           ++  A            A  +S      L+N  L   I+ KG Q  +  ++       + 
Sbjct: 72  STQVAQYKSSLGAFGYNADKVSADKVTTLENQLLSLKISNKGGQIVEARVKGQMVKGEFE 131

Query: 99  LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158
             V+ +S  V L+   N        L+  +T N +            S    +    +KL
Sbjct: 132 PLVTYDSLPVYLVKDGNASFG----LNLTTTDNRVINTKDLAFEPNYSENGDSKVLSMKL 187

Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNN-SIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
                  + +   I  D    F +     N         +   ++   +   +       
Sbjct: 188 KVAADKYLEYRYEIKDDYMVDFSVRSQGLNGVINASQPINMEWKLKSFRHAKSVTYENRY 247

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF-- 275
                        + K S + +++        +WLG    ++ S+ +        +    
Sbjct: 248 TDL-----HYEYDDGKDSYLGQATDEEKINDVTWLGYKQHFFTSILLTDDPFKTATISTE 302

Query: 276 ----KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
                 + +    +   F A     L G  +  T  L+ G  ++  +  Y+++L      
Sbjct: 303 NIVDSEMPEKDVEFLKNFGATIPLELKGGELNYTMDLYHGPTDYDILSKYDRNLDEI--- 359

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           + + WG F +I +   + +    +     GIAI++ T+ V+LL  P+  K Y+S A MK 
Sbjct: 360 VPLGWGIFGWINRFFLIPLFGLLSSFLPAGIAIIVMTILVRLLLSPITYKSYLSQAKMKV 419

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           I+P+I+E+ EK+K    +  Q+  ++LY    ++P+AGC P L+QIPVF+A++     + 
Sbjct: 420 IRPEINEINEKYKDDAMKK-QQETMKLYGKAGVSPMAGCIPALMQIPVFYALFMFFPSAF 478

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS--- 508
           E+R    + W +DL++ D   I  L   +P Y     H+ ++PI+ S+++F  M+M+   
Sbjct: 479 ELRQKS-FLWAEDLSSYD--TIAQLPFNIPVYG---DHISLFPILASIAIFFYMRMTTGQ 532

Query: 509 --PPPADKGQAMI----------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
                    Q  +          + + P++ +F  +++ +GL +Y+  SN+I+I    VI
Sbjct: 533 QMSSMQQPTQEGMPDMSKMMKYMMYFSPLMMLFFFNNYASGLSLYYFVSNLITIGIMLVI 592

Query: 557 MKMHGAEIGLIDRLRSTFSKNYN 579
                    +  ++     K   
Sbjct: 593 KNYIIDNDKIHAQIEENKKKPKK 615


>gi|326800909|ref|YP_004318728.1| membrane protein oxaA [Sphingobacterium sp. 21]
 gi|326551673|gb|ADZ80058.1| Membrane protein oxaA [Sphingobacterium sp. 21]
          Length = 609

 Score =  210 bits (534), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 113/606 (18%), Positives = 222/606 (36%), Gaps = 45/606 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N F  + L +II+     F++ P  EE+  E++   ++ Q    +       +  
Sbjct: 1   MD--RNTFTGLFLIMIILAG-SVFFMKPSEEEIKKEQQLQDSIAQAKSPETKKTTDSLFA 57

Query: 61  RAQALSMS-------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
             Q L  S                     + L+N  +  +I+ KG +   + ++G    +
Sbjct: 58  AQQGLEASTVDSTQMSGPFGGAKVGNEELISLENEFIKATISTKGGRVKSVEVKGEKDYL 117

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161
                   L+     KN +  +        N                  T +  + +   
Sbjct: 118 GKP-----LVLFGGDKNRFGLQFSTAGVNINTNDLYFIPQAKEPIVVENTDSASLIMRLS 172

Query: 162 NANNILFERTISLDEHYL---FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218
            A N   +   SL  +     F IV     + +               PQ   +    + 
Sbjct: 173 YAENKYIDYVYSLKGNSHQLGFTIVTKGMQDVVAPTETKLVLNWQADLPQKEKDMKDERN 232

Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
              A    K               +       W+     Y+++V I     +  +     
Sbjct: 233 RSTA--YFKEFDGDVNELSTTKDETKDVGKTDWISFKQHYFSNVLIAKNSFNGGTLKVST 290

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
            +     ++  +   +        T     + G  +F  +     DL      + + WG 
Sbjct: 291 VNSDEIVKSFAANMSLDFNRQDVNTYPMSFYFGPNKFSILKDQGHDLEKQ---INMGWGP 347

Query: 339 FYFIAKPMF-MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
             +I + +   + +       N+G+ I + TV +K++  PL  K YVS A M+ ++P++D
Sbjct: 348 MKWINRFITLPVFNLLEGFNWNYGLIIFVLTVLLKIVLSPLTYKSYVSMAKMRVLKPEMD 407

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           E++ K  +    +LQ+  ++LYK   +NP+ GC P+LLQ+P   A +       E+R   
Sbjct: 408 EIKAKVGEDNQTLLQQEYLKLYKQAGVNPMGGCIPMLLQMPFMIAFFFFFPNLFELRGES 467

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + W+KDL+  D    F +  I+        H+ +  I+M+ +  +    +   +     
Sbjct: 468 -FLWMKDLSTYDSIVNFPMIPIIN-----INHISLMCILMTCATLLSTWYNNMVSGATGQ 521

Query: 518 M--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
           M  I  +MP++F F L+S+PAGL  Y+  S  ++ V Q  I +    +  +   +++   
Sbjct: 522 MKYIGYFMPLIFFFVLNSYPAGLNYYYFLSTCLTFVIQFFI-RQSINDEKIHAMIQANKK 580

Query: 576 KNYNSQ 581
           K   S+
Sbjct: 581 KPEASK 586


>gi|301168599|emb|CBW28189.1| membrane protein OxaA [Bacteriovorax marinus SJ]
          Length = 488

 Score =  210 bits (533), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 111/560 (19%), Positives = 220/560 (39%), Gaps = 80/560 (14%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY--AAVLID 59
           +     F+A+ LS ++++ WQ ++   +   +          K   +   +     V+  
Sbjct: 3   DDQKRMFLAVVLSGLVLFGWQTYFAPKQKPIIEQNASEQINAKAAAKTQETTVKQEVVKP 62

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
                 S      L N      IN       DL+++ +    +S        + +  +  
Sbjct: 63  VTESVSSEVKSFTLTNNGHSVKINS------DLSIQDFSNPGAS----FDFFATTGVEKP 112

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +  E+   +  ++     +    + I G  +     + + FK  +       ++  + Y 
Sbjct: 113 FKIEIGNEARFSSFNFTFNQVSPSHIQGSNV--KLAMNVDFKMDDLGKVTYKVTSAKAYQ 170

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           F++V T T    +  +                                S   Q  + ++ 
Sbjct: 171 FRVVFTSTEREEENRQIRQF----------------------------SYYTQSLNHMKV 202

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
               +      WL I   +        +  +   +     +  +                
Sbjct: 203 GDSDDDDGKMRWLAIDFNFHLFAITFKEPVAARLKAFESGEFRSTLVNDVH--------- 253

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359
                   +    K +  +          + ++ ID+G+F  I+ P+   + + ++ V N
Sbjct: 254 ---NLEGSIVFSKKNYDLLAKLGD-----KLDLSIDFGFFGIISVPILRGLQFVHDYVPN 305

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +GIAI++ T+ ++ + FPL  K + S   M+ IQP++ +++EKFK   PQ +QK  ++ +
Sbjct: 306 YGIAIIILTILIRTIMFPLQYKSFKSMKKMQKIQPQLTKIKEKFKD-DPQRMQKETMEAF 364

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           K    NPL GC P++ Q+P+FFA Y+V+  + E   +PF+GWI DL+  DP         
Sbjct: 365 KKAGANPLGGCLPLIAQMPIFFAFYQVLYNAEEFVGSPFFGWIADLSIKDPYY------- 417

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538
                       + P++M+L+M +Q +++P P AD  Q  I+  MP+VF F +   PAGL
Sbjct: 418 ------------VLPVLMALAMALQTRLNPSPSADPTQKKIMMLMPIVFGFFMKDLPAGL 465

Query: 539 IIYWSWSNVISIVQQAVIMK 558
            +Y   S +  + QQ ++ K
Sbjct: 466 NLYIFTSTIYGVGQQLLVYK 485


>gi|183219716|ref|YP_001837712.1| inner membrane protein OxaA [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189909851|ref|YP_001961406.1| preprotein translocase subunit YidC [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167774527|gb|ABZ92828.1| Preprotein translocase, YidC subunit [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167778138|gb|ABZ96436.1| Inner membrane protein OxaA; putative membrane protein [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 649

 Score =  210 bits (533), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 113/587 (19%), Positives = 211/587 (35%), Gaps = 59/587 (10%)

Query: 29  RIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQ 88
            + +  N   N  T   P                          LK  S +   +  G +
Sbjct: 43  EVSKTENTDTNKTTTADPKAEIKKATTESTKLNPVKTEDVKTFSLKTDSFLVRFSSLGGR 102

Query: 89  FDDLNLRGYHLDVSSN-----SPIVTLLSPSNTK------NAYFAELDYVSTANNIELPN 137
             +  ++ +     S       P   +     T+           + + +   + I    
Sbjct: 103 ITEYYIKDHKEPDGSEFVIAKDPKFQIDFDGQTEKAVELTRGQGFDFNIIEDKDTIPFSA 162

Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFS 197
            N V    S    T T   +    +    + +R         FK   T+ N + + I  S
Sbjct: 163 YNLVNFSSSYNADTKTVIFEAPSLDGKFTIQKRFQFFPSENYFKFHLTLKNRTGETIHIS 222

Query: 198 PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWL----- 252
           P    +  +  ++      ++       +       Y D       +   S  +      
Sbjct: 223 PTKSDVYFRSFSSLGPILKKKEDFNDRDNAHYFRYYYLDGSFKDHVDGTSSQGFFDNLFG 282

Query: 253 ----------------------GISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
                                 G   +Y+  V  P  +                    + 
Sbjct: 283 SNEGKDTRYEIKKGSNDKVDFVGTGSRYFIGVIDPLDDKPAGVLLDNRKGNETGVLLVY- 341

Query: 291 ANEITILPGKSITTTNFLFAGAKEFP-------TIHHYEKDLAI-----PRFEMLIDWGW 338
            +   + PG+ I      + G +E          +     + ++        +   + G 
Sbjct: 342 -DNWKLGPGEEIKLDYAAYVGVRELDGTAFRDSKLDPKINNDSVFAGLSESLDKSFNQGI 400

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              +   +  ++   Y ++ N+G AI++  +  KL F+PL KKQ  S   M+ + P+I  
Sbjct: 401 TTPLRNGIVWILKKIYLVIPNYGWAIVIFAILFKLAFYPLNKKQAESMKKMQELSPQIKL 460

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           + EK+    P++ Q+  I+LYK +  NP+AGC P+L+QIP+F A+Y   S ++++ ++P 
Sbjct: 461 INEKYAD-DPKLKQEKTIELYKKNGTNPMAGCLPMLIQIPIFIALYTAFSDTVDLWNSP- 518

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + WIKDL+  D     T+F        G + + I P+IM  +  +Q KM+    D  Q M
Sbjct: 519 FLWIKDLSEPD-----TVFTTPKLAFIGTLAINILPLIMVATQVVQSKMTTVSTDPNQKM 573

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           ++  MPV+ ++   S PAG+ +YW+  N++SI QQ    K   +E  
Sbjct: 574 MMYMMPVIMLYFFWSMPAGVTMYWTMQNILSIAQQVYTNKFVKSEDK 620


>gi|317476267|ref|ZP_07935517.1| YidC/Oxa1 family membrane protein insertase [Bacteroides eggerthii
           1_2_48FAA]
 gi|316907541|gb|EFV29245.1| YidC/Oxa1 family membrane protein insertase [Bacteroides eggerthii
           1_2_48FAA]
          Length = 615

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 108/589 (18%), Positives = 223/589 (37%), Gaps = 48/589 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--KNIQTVKQPNQVDNSYAAVLI 58
           M+   N    + L  I++  +       + +    +R   +I  V+Q      + A   +
Sbjct: 1   MD--KNTITGLVLIAILLVGFSFLSRPNKEQLAAQQRYYDSIAQVQQREADLKAKAEAAL 58

Query: 59  DDRAQALSMSPR-------------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
            +  +A +                 V ++N     ++  KG +     L+ Y        
Sbjct: 59  ANNKEAQTTDSTALFFDALQGTDSQVTIQNNLAELTVATKGGRISSATLKEY--MGQDKK 116

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             VTL S  +    +           N +       +          T  ++L   +A+ 
Sbjct: 117 TPVTLFSGDDASMNFLFY--------NKKETIQTEDYYFKVVDYTDSTATMRLSADSASY 168

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           I F+ ++  ++ YL          +               + +     +  +     +  
Sbjct: 169 IDFKYSMH-NDTYLVDFTIDAVGMANKLASTKYVDIEWSQRARQIEKGYTYENRLSELTY 227

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
             +     Y    K+      E   W+   +++++SVF+   +         +    + Y
Sbjct: 228 KITGDGTDYLSAGKNDEKEVAERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQGSGY 287

Query: 286 QAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWGWFY 340
              +SA   T   P    TT  F + G   + T+   +K       + R   L      +
Sbjct: 288 IKDYSAEMSTVFDPTGEKTTQLFFYFGPNHYKTLTALDKGRTEKWELNRLVYLGWPLIRW 347

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   +  +  +   + GI ++L T+ VK + FP   K Y+S+A M+ ++PKIDE+ 
Sbjct: 348 INKWFTINIFDWLSSWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKPKIDEIG 407

Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +K+ +       Q+ ++ LY  + ++P+ GC P+L+Q P+  A++  +  ++E+R    +
Sbjct: 408 KKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS-F 466

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQ 516
            W  DL+  D          +PF      H+ ++ ++M+++  +  K      D     Q
Sbjct: 467 LWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKFMMQQQDTGANPQ 521

Query: 517 AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
              + WM    PV+F+F L+ +P+GL  Y+  S +IS+V   +IM+   
Sbjct: 522 MAAMKWMSYLMPVMFLFILNDYPSGLNYYYFISTLISVV-TTLIMRKTT 569


>gi|218130954|ref|ZP_03459758.1| hypothetical protein BACEGG_02556 [Bacteroides eggerthii DSM 20697]
 gi|217986826|gb|EEC53158.1| hypothetical protein BACEGG_02556 [Bacteroides eggerthii DSM 20697]
          Length = 615

 Score =  209 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 108/589 (18%), Positives = 223/589 (37%), Gaps = 48/589 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--KNIQTVKQPNQVDNSYAAVLI 58
           M+   N    + L  I++  +       + +    +R   +I  V+Q      + A   +
Sbjct: 1   MD--KNTITGLVLIAILLVGFSFLSRPNKEQLAAQQRYYDSIAQVQQREADLKAKAEAAL 58

Query: 59  DDRAQALSMSPR-------------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
            +  +A +                 V ++N     ++  KG +     L+ Y        
Sbjct: 59  ANNKEAQTTDSTALFFDALQGTDSQVTIQNNLAELTVATKGGRISSATLKEY--MGQDKK 116

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             VTL S  +    +           N +       +          T  ++L   +A+ 
Sbjct: 117 TPVTLFSGDDASMNFLFY--------NKKETIQTEDYYFKVVDYTDSTVTMRLSADSASY 168

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           I F+ ++  ++ YL          +               + +     +  +     +  
Sbjct: 169 IDFKYSMH-NDTYLVDFTIDAVGMANKLASTKYVDIEWSQRARQIEKGYTYENRLSELTY 227

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
             +     Y    K+      E   W+   +++++SVF+   +         +    + Y
Sbjct: 228 KITGDGTDYLSAGKNDEKEVAERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQGSGY 287

Query: 286 QAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWGWFY 340
              +SA   T   P    TT  F + G   + T+   +K       + R   L      +
Sbjct: 288 IKDYSAEMSTVFDPTGEKTTQLFFYFGPNHYKTLTALDKGRTEKWELNRLVYLGWPLIRW 347

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   +  +  +   + GI ++L T+ VK + FP   K Y+S+A M+ ++PKIDE+ 
Sbjct: 348 INKWFTINIFDWLSSWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKPKIDEIG 407

Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +K+ +       Q+ ++ LY  + ++P+ GC P+L+Q P+  A++  +  ++E+R    +
Sbjct: 408 KKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS-F 466

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQ 516
            W  DL+  D          +PF      H+ ++ ++M+++  +  K      D     Q
Sbjct: 467 LWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKFMMQQQDTGANPQ 521

Query: 517 AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
              + WM    PV+F+F L+ +P+GL  Y+  S +IS+V   +IM+   
Sbjct: 522 MAAMKWMSYLMPVMFLFILNDYPSGLNYYYFISTLISVV-TTLIMRKTT 569


>gi|289548954|ref|YP_003473942.1| membrane protein insertase, YidC/Oxa1 family [Thermocrinis albus
           DSM 14484]
 gi|289182571|gb|ADC89815.1| membrane protein insertase, YidC/Oxa1 family [Thermocrinis albus
           DSM 14484]
          Length = 498

 Score =  209 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 125/573 (21%), Positives = 228/573 (39%), Gaps = 84/573 (14%)

Query: 1   ME----RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M+         F+ + +    ++A+Q + +  R      E+          Q D S   +
Sbjct: 1   MDKKDIDTKRLFIFLLVITFALFAYQTYLLLFRPSTPPQEKPKQ------VQKDESVPQL 54

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
           ++    +A   S  +  +       I+ +G +        Y  D+        + S    
Sbjct: 55  MLGSFREAQKPSETLSYRLGDFSIKISPQGGKVVSWVDEKYGKDL--------VTSTEKK 106

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
              Y  E+       ++EL  S         +I              N     + +  D 
Sbjct: 107 LGVYPLEIFTGDPQKDVELNFSPYQVQGSDREISMTLQ--------GNGWFVRKRLVYDG 158

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
                I   +    +  I        +        ++F    G +      S+      D
Sbjct: 159 ER---IKLYIEEQGLGPIW-------VNVGTPLEEDSFYTHVGPVLEQD-GSVKRIDIKD 207

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
           +      +      + G+  +Y+    +             L   H+    ++S   I  
Sbjct: 208 V--EGRQSIKGDIKFAGVESRYYFKGLV---GNIPQVVIYRLEGDHSLVVVRYSQPLI-- 260

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
                      L+ GAK++  +        +     ++D+G    I KP+F+ M + Y  
Sbjct: 261 -----------LYMGAKDYGRLR-------VLGLSEVLDYGTLRIIVKPLFVFMYWIYEH 302

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           + ++  +I++ T+ V+L+ FPL  K  VS   +  + PK+ ELREK+K  P +  Q+ ++
Sbjct: 303 LHSWVFSILVLTLLVRLIVFPLTYKSTVSMMRLSELAPKMQELREKYKDDPVK-FQEELM 361

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LY     NP++GC PILLQIP+FFA+YKV++I+ E++ A  + WI  LA  DP      
Sbjct: 362 KLYAEAGFNPMSGCLPILLQIPIFFALYKVLTITAELQLAS-FLWIPSLAQKDPYY---- 416

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536
                          + PI+M ++M  Q  +SP P DK Q +++    VVF F  +SFP+
Sbjct: 417 ---------------LLPILMGVTMIAQQWVSPAP-DKSQNLMMYVTSVVFTFLFASFPS 460

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           GL++YW+++N+++IVQ  VI +    E     +
Sbjct: 461 GLVLYWTFNNILNIVQSYVIKRFLLKEEPKRGK 493


>gi|108761211|ref|YP_635612.1| inner membrane protein, 60 kDa [Myxococcus xanthus DK 1622]
 gi|108465091|gb|ABF90276.1| inner membrane protein, 60 kDa [Myxococcus xanthus DK 1622]
          Length = 603

 Score =  209 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 111/558 (19%), Positives = 193/558 (34%), Gaps = 53/558 (9%)

Query: 30  IEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89
            +              P                     + +VEL+      + + +GA  
Sbjct: 46  PDAGVVATAPADAGTPPAVQPPEGGTGTGATAEAPPPPARKVELQRDEATYAFSSEGAGL 105

Query: 90  DDLNLRGYH----LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-------NIELPNS 138
               L+G       +++       L                                P  
Sbjct: 106 TAAVLKGAKMREQQELTVTQGFQKLFGKEIPPAPQMDLARPTPGQPLPLAVSITGASPLP 165

Query: 139 NTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSP 198
             +   +          +    +     + +      + +       V N S        
Sbjct: 166 ADLNYTLDEGAPGNADGVTFTGRRGPWEVVKTVKWPMDGFELSYTLQVRNTSGQPQSGEL 225

Query: 199 RGRIMRHKPQTATNTFGVQE-----GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253
           +    R       +              A      L +    D    +         + G
Sbjct: 226 QVHHNRAIDPNFEHAPSFFGGVGNLSRSACWVGDKLQKMSPGDDHPDAED-TRGQIQFFG 284

Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313
           I  +Y+ S   P +     S     +    +  A F    IT  PG+++T     + G K
Sbjct: 285 IDQQYFLSALYPLEGPRAGSCSFEATPTLRKVTASF---PITAAPGETVTLRFGGYFGPK 341

Query: 314 EFPTIHH-----------YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362
           +   +                    P     +D+G +  I K +  +M +FY + GN+G+
Sbjct: 342 DTDLLAQVPGASLRAATGQTDATFHPPLAETVDFGIWAVICKVLLWVMKFFYGVTGNWGV 401

Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422
           AI+L TV VKL+  PL  +  VS   +K +QP+++E+R+K   +  Q     +++LY+  
Sbjct: 402 AIILLTVVVKLVLLPLTYRSMVSMEEVKKLQPRMEEIRKKHADNREQQNL-EIMKLYQEA 460

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK-DLAAADPTNIFTLFGILP 481
            +NPL GC P+L+Q+PV+ A++  +  S ++   PF G I  DL   DPT          
Sbjct: 461 KVNPLGGCLPLLIQMPVWIALFTALRNSFDIYGEPFIGPIWRDLTYKDPTY--------- 511

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLII 540
                     + P+ + +SM I  KM P   D  QA I+ W  P++F   L  +PAGL +
Sbjct: 512 ----------LLPLALGVSMVITQKMQPQMMDATQAKIMTWFLPIIFTLTLLQYPAGLSL 561

Query: 541 YWSWSNVISIVQQAVIMK 558
           Y   +N++SI QQ  + K
Sbjct: 562 YIFTNNILSIAQQYGLRK 579


>gi|258649215|ref|ZP_05736684.1| inner membrane protein OxaA [Prevotella tannerae ATCC 51259]
 gi|260850480|gb|EEX70349.1| inner membrane protein OxaA [Prevotella tannerae ATCC 51259]
          Length = 626

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 102/607 (16%), Positives = 215/607 (35%), Gaps = 43/607 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPR----IEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M+   N    + L  +++  +  +         + E   +               +    
Sbjct: 1   MD--KNTLTGLFLIALLLIGFSYYTTTQTEETQVAEQTAQPAAKPATDSTKVSTTANKQQ 58

Query: 57  LIDDRAQALSMSPR-----VELKNPSLIGSINLKGAQFDDLNL---RGYHLDVSSNSPIV 108
            I D     + S       + LKN  +  +I+ KG    ++ L   + Y    ++    +
Sbjct: 59  HIADSTDIFNGSREGENTPISLKNEHVAVTISPKGGAISNVRLCEFKSYSDFQNNKEAQL 118

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
           +L+     K  +  E                              T   L     ++   
Sbjct: 119 SLIEEKTHKLNFRFETI------------EGLYSTEDYYFQPLAKTDSTLTMALGSSKGD 166

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
              I          V+T              G   ++K +     F  +  +  +   K 
Sbjct: 167 TLYIDYKLIKGSYFVNTTIRIKGRSFAGKTLGIDWKNKIRQQEKGFYFENLYSTLTYKKE 226

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL--SDGHARYQ 286
                    +KS       +  W+   D+Y+++V I  K +  ++  K    S+G    +
Sbjct: 227 NEGTDKLSEQKSDELKPEGNIDWIAFKDQYFSAVLIAGKNSFTNTFLKSDTCSEGSGYVK 286

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHH------YEKDLAIPRFEMLIDWGWFY 340
              +  E+   P     T    + G  ++  +          KDL +     L    + +
Sbjct: 287 DYIATAEVAFDPTGKNVTQVQFYFGPNKYLYLKGLEKYKLGNKDLDLQDLVYLGWPLFRW 346

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   +  +      N GI ++L T+ ++ + +P  KK ++STA M+ ++PK+DEL 
Sbjct: 347 INRFFTIYVFDFLSGFGLNMGIVLLLITLLMRAIVYPATKKSFLSTAKMRVLRPKVDELA 406

Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +K+         Q+  +QLY  + ++P+ GC P+ +Q+P++ A++  +  + E+R    +
Sbjct: 407 KKYPNKEDAMKRQQETMQLYSQYGVSPMGGCLPMFIQMPIWIAMFNFVPNAFELRQQ-AF 465

Query: 460 GWIKDLAAADPTNIFT--LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            W  DL+  D    +   ++GI        +      ++ S     Q + S       Q 
Sbjct: 466 LWADDLSTYDDIISWNTPIWGIGTHLSLFCVLFCCTNLLYSWLTMKQQQDSMSGEQAQQM 525

Query: 518 MILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
            I+ W    MP+ F F  + + +GL  Y+  S + S +    + +    +  L+++L + 
Sbjct: 526 KIMQWMTFLMPIFFFFMFNKYSSGLNYYYFVSLLTSALTMWYLRRSTDDK-KLLEKLEAN 584

Query: 574 FSKNYNS 580
           F  N ++
Sbjct: 585 FRANKDN 591


>gi|325282064|ref|YP_004254606.1| Membrane protein oxaA [Odoribacter splanchnicus DSM 20712]
 gi|324313873|gb|ADY34426.1| Membrane protein oxaA [Odoribacter splanchnicus DSM 20712]
          Length = 616

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 105/606 (17%), Positives = 237/606 (39%), Gaps = 39/606 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP-------------- 46
           M+   N    + +  +I+  +       + +    +RK     +                
Sbjct: 1   MD--KNTIAGLVIIFLILIGFSYLTRPSKEQVAEMQRKQDSIARVDRLRAQELAAQQQAQ 58

Query: 47  NQVDNSYAAVLIDDRAQAL-----SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
              DN+ AA  +  ++ ++     + +  + L+N  +   I+  G +   ++L+ Y    
Sbjct: 59  KTPDNTTAANPLATKSDSIFVQNDTENKIITLENDKIKLHISTLGGRIVYVDLKEYRT-- 116

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161
             +S  + L     T                      +T    +  +       ++L   
Sbjct: 117 -HDSLPLVLWKNGETAFGMNFYARNQEINTEKFFFTPSTTETTLYAQGNEQVLSMRLYAD 175

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
           ++  + +   ++ D +     + T     +     S               +   +  + 
Sbjct: 176 SSRYLEYLYKLAPDSYMTDFSIITHNMGDVIASNSSFLTLFWGINMPQLEKSKDFENRYT 235

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281
            V    S    +   +             W+    ++++S+ I  +  S       +S  
Sbjct: 236 GVYYKFSEDAVENMSLTSDEEETLPNKVQWIDFKQQFFSSILISEQPLSDVELKSNISKK 295

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
               +  ++   +      +       F G   +  +  Y   L +P    +      +F
Sbjct: 296 DGYLKDAYAEIPLAYNGSANEQYNMQFFFGPNSYKVLKEYGDHLDLPDVINMGWKWIAWF 355

Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
               +  + ++  N    N+GI I+L T+ +K++ FPL  K Y+S A M+ ++P++DE+ 
Sbjct: 356 NKYFVIPIFNFLENHTALNYGIIILLLTLIIKIILFPLTYKSYMSQARMRVLKPQVDEIA 415

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           +K+        Q+A ++LYK   +NP+ GC P+L+Q+P+  A++     ++E+R    + 
Sbjct: 416 KKYPADKAMERQQATMKLYKQAGVNPMGGCLPMLIQMPILIALFYFFPGAIELRQQS-FL 474

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKG-- 515
           W  DLA+ D  +I TL   +PFY     HV ++ ++M+ +  I M M   + P  D+   
Sbjct: 475 WATDLASYD--SIATLPFTIPFYGN---HVSLFCLLMTATNIIYMIMNNKNQPQNDQMKG 529

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
              ++  MP++F+F  +S+ +GL  Y+  + +I+I+Q  +I +    +  L+ ++    +
Sbjct: 530 MQTMMYIMPIMFLFIFNSYSSGLSYYYFIATLITILQTWII-RKFVDDQKLLKQI--ELA 586

Query: 576 KNYNSQ 581
           K+   +
Sbjct: 587 KSKPVK 592


>gi|300772349|ref|ZP_07082219.1| membrane protein OxaA [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760652|gb|EFK57478.1| membrane protein OxaA [Sphingobacterium spiritivorum ATCC 33861]
          Length = 607

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 105/603 (17%), Positives = 228/603 (37%), Gaps = 42/603 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + + L   I+     + + P   E+  E++   ++K+  +     A    + 
Sbjct: 1   MD--RNTLIGLILIFAILGG-SFYLMKPSESEIKQEQRLQDSLKRVKEGLPPVADTTKNP 57

Query: 61  RAQALSMSP-------------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
              A++ +                     + L+N  +I  I  KG +   + L+      
Sbjct: 58  AKTAVNTNQVDSAELKKPFGAAKYGEEKIITLQNEKIIAKITSKGGRVKSVELKN--EKN 115

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161
              SP++     +N     F       + NN+    ++   ++  G   T     +L + 
Sbjct: 116 FDGSPLILFDGNNNRFGLMFNAAGQNISTNNLNFQTTDADVSVSKGDSKTV--KFRLSYN 173

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
           +A  I +  T+  D++ L   V+ V   ++                         +    
Sbjct: 174 DAQYIEYTYTLKGDDYNLGLDVNAVGLQNLIPQDQKTILLDWGAVLYQKEKNIKGERDKS 233

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281
           ++    +     +            +  +W+     Y++S+       +        +  
Sbjct: 234 SIYYKTAENNVDHLKESGDDDDQLDKRLTWIAFKQHYFSSILTSKTGFASADLDVKTAAE 293

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
               +   +  ++     K    +   F G  ++  +             + + WG   +
Sbjct: 294 ADIVKLYSAKAKLDFSNQKDNQYSFNFFFGPNKYNILKAQNDGSNSI---INMGWGPMRW 350

Query: 342 IAKPMF-MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           I + +   + ++      ++GI I++ T+ +K + FPL  K Y S A M+ ++P++DE++
Sbjct: 351 INQWITVPVFNFLDGFHMSYGIVILILTILLKGVLFPLTYKSYQSMAKMRVLKPQLDEIK 410

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
            K  +    +LQ+  ++LYK   +NPL GC P++LQ+P   A +       E+R    + 
Sbjct: 411 AKVGEDNAVLLQQEQMKLYKQAGVNPLGGCLPLVLQMPFTIAFFYFFPNLFELRGES-FL 469

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-- 518
           W+KDL+  D    F     +        HV +  ++M+L+  +    +   +     M  
Sbjct: 470 WVKDLSTYDSPITFPAIFGI-------DHVSLMCVLMTLTTLLTTWYNNATSGATGQMKY 522

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           I  +MP++F F L+SFPAGL  Y+    V + + Q +I +    +  ++ ++     K  
Sbjct: 523 IGYFMPLIFFFVLNSFPAGLNYYYFLGAVFTFLTQLLI-RSFVDDDKILAKIEEN-KKRP 580

Query: 579 NSQ 581
            S+
Sbjct: 581 ESE 583


>gi|149277802|ref|ZP_01883942.1| putative inner membrane protein translocase component YidC
           [Pedobacter sp. BAL39]
 gi|149231490|gb|EDM36869.1| putative inner membrane protein translocase component YidC
           [Pedobacter sp. BAL39]
          Length = 598

 Score =  207 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 101/595 (16%), Positives = 215/595 (36%), Gaps = 40/595 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN------------NERKNIQTVKQPNQ 48
           M+   N F  + L +I++     F+   + E                 +        P  
Sbjct: 1   MD--RNTFTGLFLIMIVLAGSFYFFSPSQTEINKEKERIAADSLKKTTKAVTPAATAPTV 58

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
                AA+           +    L+N  L  ++  KG +   + ++            V
Sbjct: 59  PAVDSAALKGPFGGNITGTAQTTVLENEQLKLTLTNKGGRILSVVVKDQKT---YEGKPV 115

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
            L      K      +       N          N ++ +             +      
Sbjct: 116 VLFDGDQNKFGLNLNIGGKLVNTNDLYFTPTNNGNSVTMRATYLGNQYVEYVYDLQAKSN 175

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
                ++ + + +++     N   +     + +  + + + A   +         L    
Sbjct: 176 NVGFKINLNGMNQVIQNNAINLNWETVLLEQEKSGKKEKEHAAPYYKYVNESPDHLSIAK 235

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             ++   + +            W     +++++V +P +          +S    + +  
Sbjct: 236 DEKEDLKEGKIE----------WFSFKQQFFSAVLLPKEAFEKGDLEVKVSTQPGQIKWY 285

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
            +  E+      S +     + G  +F ++     +  I +   +  W   Y     +  
Sbjct: 286 AANMELKFNQLASQSYAMDFYFGTNKFSSLKDQGHE--IEKLVDMGYWPLKYINRFVVLP 343

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           +  +      N+G+ I++ T+ +K+   PL  K Y S A M+ ++P++DE++ K  +  P
Sbjct: 344 VFKFLEGFGWNYGLIILVLTIMLKVAMSPLTYKSYTSMAKMRILKPEMDEIKAKVGEDNP 403

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
            +LQ+  ++LYK   +NPL GC P+LLQ+P   A +       E+R    + W+KDL+  
Sbjct: 404 TLLQQEYLKLYKQVGVNPLGGCLPMLLQLPFVMAFFFFFPNLFELRGES-FLWMKDLSTY 462

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWMPVV 526
           D    F     LPF      H+ +  ++M++S  I    +   +     M  I   MP+V
Sbjct: 463 DDFIKFG--FTLPFIG---DHLSLMCVLMTISTLIYTYFNNQISGATGQMKYIGYIMPIV 517

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           F+  L+S+P+GL  Y+  +N+++  QQ +I K    +  +   L+    K   ++
Sbjct: 518 FLGVLNSYPSGLNYYYFLANMLTFAQQFLI-KSMVDDEKIHRTLQEN--KTKPAE 569


>gi|251772740|gb|EES53302.1| putative inner-membrane protein [Leptospirillum ferrodiazotrophum]
          Length = 399

 Score =  207 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 116/419 (27%), Positives = 187/419 (44%), Gaps = 35/419 (8%)

Query: 141 VWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRG 200
            W       L+ T+P  L    + N              + +  +V N   D +      
Sbjct: 8   QWGPPFLPYLSVTSPSTLSLIYSFNNHPVTLSYTLPPQGYHVTVSVDN--PDHLHLVFLP 65

Query: 201 RIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWA 260
            +               +G I    D  + E K    +  S      S +W+G   KY+ 
Sbjct: 66  GLNFGMSDETQFIGTEFQGPIYGTPDGKMNEFK----KDISEVFPPTSLTWVGNETKYFI 121

Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320
             +I  K     ++            +  +A+    L G+    +    A      T+  
Sbjct: 122 -GYISLKGFPASTEIIKDKTNSFIRLSFNNAHASLTLTGEPKRYSLLKSAEPGLLDTV-- 178

Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
              D     F  +       F+AK +F+ +S  Y  + N+G AI+  T+ +K+LF PLA 
Sbjct: 179 ---DFGWFLFGRI---TLVSFLAKFLFVFLSTLYTHMQNYGFAIIFVTLLIKILFSPLAY 232

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
             + S   M+ +QP+I +L+ K+K    Q L  AM++LYK   INPL GC P+++QIPVF
Sbjct: 233 MSFRSMNQMQQLQPEIKKLQAKYKDDKAQ-LNAAMMELYKERRINPLGGCLPVIVQIPVF 291

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            A+Y +++ ++E+R APF  WI DL+  DP  IF                   PIIM ++
Sbjct: 292 VALYNILNNTVELRQAPFLLWIHDLSIKDPYYIF-------------------PIIMGIT 332

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           M IQ K++P   D  Q  I+ ++PVV  F   +FP+GL++YW  +N+++I QQ V+M+ 
Sbjct: 333 MVIQTKLTPSTPDPMQRRIMLFLPVVMTFFFLNFPSGLVLYWIVNNLLTIGQQYVLMRY 391


>gi|149372149|ref|ZP_01891419.1| putative inner membrane protein translocase component YidC
           [unidentified eubacterium SCB49]
 gi|149354916|gb|EDM43478.1| putative inner membrane protein translocase component YidC
           [unidentified eubacterium SCB49]
          Length = 628

 Score =  207 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 112/628 (17%), Positives = 233/628 (37%), Gaps = 73/628 (11%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEE----------------------MNN 35
           ME      N  +   L   I+  W  +   P  EE                       N 
Sbjct: 1   MEDKKFDLNSLIGFLLIGGILI-WMLYLNKPSEEEILAEEARIEAEAKAAKIEAENKANQ 59

Query: 36  ERKNIQTVKQPNQVDNSYAAVLID---------DRAQALSMSPRVELKNPSLIGSINLKG 86
                Q  +      N  AA++             +   + S    ++N  L   ++ KG
Sbjct: 60  TTTLTQATEDMAVKPNDSAAMMQLKNKLGSFAYSGSLPSATSNTTVIENDVLYLEVSNKG 119

Query: 87  AQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI- 145
               +  L+ +      +S  V L+   N+        +   T+ N  L   +  +    
Sbjct: 120 GYVTEARLKEFKT---YDSIPVYLIKDGNS------SFNLKFTSENRTLNTKDLYFEPTL 170

Query: 146 SGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS--IDQIRFSPRGRIM 203
           +         ++L       I +   I   E+     + +   +             ++ 
Sbjct: 171 TQNGANQVLTMRLKTAEDKFIEYRYEILPGEYMTNFSIRSQGLDGMLDTSQPLEIDWQLK 230

Query: 204 RHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVF 263
            ++   + +                  +               +  SW+     +++S+ 
Sbjct: 231 GYRHAKSISYENRYTRLTYEYEGSKHSKLD----PTGEDVETEKEVSWMNFRQHFFSSML 286

Query: 264 IPSKETS----FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319
           +                   +    Y   + A  +    G +++    ++ G  ++    
Sbjct: 287 LTGDPFKEVKLSSIDLVEDEEVDTVYTKHYGAKMLLTPKGGALSYNMNMYYGPTDYKIFK 346

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379
            Y+++L      M + WG F  I K   + +  F +   + GIAI++ T+ +KLL   + 
Sbjct: 347 KYDRNLDEA---MPLGWGIFGVINKYFIIPLYGFLSTYLSAGIAIIVMTILIKLLLSFVQ 403

Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
            KQY++ A MK ++P+ID ++EKF  +  + +Q+  ++L      +PL GC P +LQIPV
Sbjct: 404 YKQYLAQAKMKVLKPEIDAIKEKFGDNKMK-IQQETMKLQNIAGASPLKGCLPAILQIPV 462

Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           F+A++     ++++R    + W  DL++ D  ++  L   +PFY     HV ++PI+ S+
Sbjct: 463 FYALFTFFPTAIDLRQKS-FLWADDLSSFD--SVINLPFTIPFYG---DHVSLFPILASI 516

Query: 500 SMFIQMKMSPPPADKGQAM--------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++FI M M+   + + Q          ++   P+  +   +++ +GL +Y+  SN+I+I 
Sbjct: 517 AIFIYMTMTMGQSMQAQQQPGMPNMKFLMYLSPLFMLVFFNNYASGLSLYYFISNLITIG 576

Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
              VI      E  +  +++   +K   
Sbjct: 577 IMLVIKNWIIDEDKIHAQIQVNKAKPKK 604


>gi|332143491|ref|YP_004429229.1| inner membrane protein, 60 kDa [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327553513|gb|AEB00232.1| inner membrane protein, 60 kDa [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 441

 Score =  207 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 101/448 (22%), Positives = 194/448 (43%), Gaps = 23/448 (5%)

Query: 1   MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQT------VKQPNQVDNS 52
           ME   +   + +AL S ++   WQ  Y    +E +  + +                V +S
Sbjct: 1   MESQRSFLIIGLALVSFLLWQQWQKDYGPQPVEPVEQQAQQTTQGVPSFNDTGNEDVPSS 60

Query: 53  YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
            +         A S +  +E+K  +L   I+L G      +L  + ++  S+ P   L S
Sbjct: 61  DSVPAAQPAVTAQSTNRIIEVKTDTLDLRIDLLGGDVISADLLKFPVEQGSDIPYSLLRS 120

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLIS--GKILTPTTPIKLVFKNANNILFER 170
            +     Y A+   +         N   V+   S   ++   T  I L +KN   +   +
Sbjct: 121 GNG---LYVAQSGLIGAQGPDASANGRPVYTAQSEFYEMTGDTLVIPLTWKNNQGLSITK 177

Query: 171 TISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
           T +    HY   +   + N +       P  ++ +           +     A    +  
Sbjct: 178 TFTFTKNHYDVNVSYDINNGTGSAATVQPYAQLKQVMEFEDDGNMFMPTYRGAAYSTEDD 237

Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
             QKY  D  +           W+G+ + Y+ S ++PS+E +     + L + +A     
Sbjct: 238 RYQKYSFDEIEDDNLRETTKAGWVGMLEHYFVSAWVPSQEQTNTVYSRNLKNQYAV--IG 295

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
             +   T+  G + T  + L+ G K+   +    +       ++ +D+G  ++I++P+F 
Sbjct: 296 VLSPSETVASGDTKTIASTLYMGPKDQDKLAKIAR-----GLDLTVDYGILFWISQPLFA 350

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+++ ++LV N+G+AI+L T+ VK   + L KKQY S A M+N+ PK+ +L+++F     
Sbjct: 351 LLTFLHSLVNNWGVAIILITIVVKGAMYWLTKKQYESMARMRNLAPKMQQLKDRFGD-DR 409

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQ 436
           Q + +AM++LY+   +NP+ GC P+LLQ
Sbjct: 410 QKMSQAMMELYRKEKVNPMGGCLPLLLQ 437


>gi|281423172|ref|ZP_06254085.1| inner membrane protein OxaA [Prevotella oris F0302]
 gi|281402508|gb|EFB33339.1| inner membrane protein OxaA [Prevotella oris F0302]
          Length = 644

 Score =  206 bits (524), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 111/620 (17%), Positives = 240/620 (38%), Gaps = 55/620 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE--RKNIQTVKQPNQVDNSYAAVLI 58
           M+   N  +   L  +++  +  +Y  P  EE      + +I+ V +   +  +  A   
Sbjct: 1   MD--KNNIIGFLLIAVVLIGFS-WYNRPSAEEQRAAFVKDSIEHVNKSQSLKATQQAEKR 57

Query: 59  DDRAQALS---------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYH----- 98
             +A+                   + ++ LKN  +  ++N KGA  +   ++GY      
Sbjct: 58  KQQAERQKVLDDTTSLFHKTLTGNAEQIVLKNKKVELTLNTKGATVEKAVIKGYVGHNLK 117

Query: 99  -LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155
             D S++   V L + ++   +Y   A+   ++T++   +P+  T   +           
Sbjct: 118 VKDGSADQNDVILFNGADQSLSYMLSAKETNINTSDLYFVPSQVTDSTVTFTANAGEGKT 177

Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
           + L +    + +    +S           T T +   + +   + R    + + AT T+ 
Sbjct: 178 LTLKYVLGKDYMLHMQLSAQGMSGLFSPGTQTMDVNWKDKVRQQERGFTFENRYATLTY- 236

Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275
             +            E               +   W+   ++++++V I   +   ++  
Sbjct: 237 -HKSEGGTDYLNEGKEITD--------EAIEDKIDWIAFKNQFFSAVMIAKNDFKSNALM 287

Query: 276 KYLSDGHARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHY------EKDLAI 327
             +         K    ++     P     +    + G  +F  +          KDL +
Sbjct: 288 TSIPQEKGSGYLKQYEAKMKTFFDPTGRQASEFDFYYGPNDFRLLQKMERECHFAKDLQM 347

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
            R   L    +          +  +   +  N GI ++L T+ +KLL +P+ KK Y+S+A
Sbjct: 348 QRLVYLGWPLFRIINRWFTLYVFDFLTGMNINMGIVLILITLLLKLLTYPMVKKSYMSSA 407

Query: 388 NMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            M+ ++PK+DE  ++F +   Q+  Q+AM+  Y  + ++PL+GC P+L+Q P++ A++  
Sbjct: 408 KMRVLKPKLDEATKQFNKPEDQMQKQQAMMSEYAKYGVSPLSGCLPMLIQAPIWIAMFNF 467

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQ 504
           +  ++++R    + WIKDL+  DP   +     L         +   +  ++ ++    Q
Sbjct: 468 VPNAIQLRGES-FLWIKDLSTFDPIWEWNHNIWLIGDHLSLTCILFCVANVLYTVMTMRQ 526

Query: 505 MKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            K         Q  ++ WM    PV+F F  + + AGL  Y+  S   S      + +  
Sbjct: 527 QKDQMVGQQADQMKMMQWMMFLMPVMFFFMFNDYSAGLNFYYFVSLFFSAAIMWAL-RKT 585

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
             +  L+  L   + +N  +
Sbjct: 586 TNDEKLLAILEQRYQENKAN 605


>gi|317503117|ref|ZP_07961189.1| inner membrane protein OxaA [Prevotella salivae DSM 15606]
 gi|315665767|gb|EFV05362.1| inner membrane protein OxaA [Prevotella salivae DSM 15606]
          Length = 644

 Score =  206 bits (524), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 108/620 (17%), Positives = 235/620 (37%), Gaps = 55/620 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  +   L   ++  +  +Y  P  EE           +         A +  + 
Sbjct: 1   MD--KNNIIGFLLIAAVLIGFS-WYNQPSAEEQRAAFVKDSIEQVNKSQSEKAAQMEKNK 57

Query: 61  RAQALSM-----------------SPRVELKNPSLIGSINLKGAQFDDLNLRGYH----- 98
           R QA                      R+ LKN  +  + + KGA  +   ++GY      
Sbjct: 58  RQQAEKQKVLSDTTSLFHKALTGNVERIVLKNKKVELTFSSKGAYVEQAVIKGYVGHNIK 117

Query: 99  -LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155
             + S++   +TL S ++   +Y   A+   ++TA    +P+  +   +           
Sbjct: 118 VKNGSADKKNLTLFSGADQSISYLLNAKETNINTAELYFVPSEVSDSTVTFIADAGEGKS 177

Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
           + L ++   + +    +S+          T T +   + +   + R    + + AT T+ 
Sbjct: 178 LTLKYELGRDYMLHMQMSVQGMAGLFAPGTQTMDVNWKDKARQQERGFSFENRYATLTY- 236

Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275
             +            E+              E   W+   ++++++V I       ++  
Sbjct: 237 -HKKDGGTDYLNETKEEIDKS--------IEEQIDWVAFKNQFFSAVMIAKNNFQSNALM 287

Query: 276 KYLSDGHARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
             +         K    ++     P     +    + G  +F  +   EK+    +   +
Sbjct: 288 TSIPQEKGSGYLKQYEAKMKTFFDPTGKKASEFEFYYGPNDFRLLQKMEKESQFHKDLQM 347

Query: 334 IDWGWFYFIA------KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
               +  +             +  +  ++  N GI ++L T+ +KLL +P+ KK Y+S+A
Sbjct: 348 QRLVYLGWPLFRIINRWFTLYVFDFLTSMNINMGIVLILITLLLKLLTYPMVKKSYMSSA 407

Query: 388 NMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            M+ ++PK+DE  ++F +   Q+  Q+AM+  Y  + ++PL+GC P+L+Q P++ A++  
Sbjct: 408 KMRVLKPKLDEATKQFDKPEDQMQKQQAMMAEYAKYGVSPLSGCLPMLIQAPIWIAMFNF 467

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQ 504
           +  ++++R    + WIKDL+  DP   +     L         +   +  ++ ++    Q
Sbjct: 468 VPNAIQLRGES-FLWIKDLSTYDPIWEWNHNLWLIGDHLSLTCILFCVANVLYTMMTMRQ 526

Query: 505 MKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            K         Q  ++ WM    P++F F  + + AGL  Y+  S   S      + +  
Sbjct: 527 QKDQMVGQQADQMKMMQWMMFLMPIMFFFMFNDYSAGLNFYYFVSLFFSAAIMWAL-RKT 585

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
             +  L+  L   + +N  +
Sbjct: 586 TNDEKLLAILEKRYQENKAN 605


>gi|299140577|ref|ZP_07033715.1| inner membrane protein OxaA [Prevotella oris C735]
 gi|298577543|gb|EFI49411.1| inner membrane protein OxaA [Prevotella oris C735]
          Length = 644

 Score =  206 bits (523), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 111/620 (17%), Positives = 237/620 (38%), Gaps = 55/620 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM------------NNERKNIQTVKQPNQ 48
           M+   N  +   L  +++  +  +Y  P  EE             N  +    T     +
Sbjct: 1   MD--KNNIIGFLLIAVVLIGFS-WYNQPSAEEQRAAFVKDSIKHVNKSQSLKATQLAEKR 57

Query: 49  VDNSYAAVLIDDRA-----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH----- 98
              +    ++DD            + ++ LKN  +  ++N KGA  +   ++GY      
Sbjct: 58  KQQAERQKILDDTTSLFHKTLTGNAEQIVLKNKKVELTLNTKGATVEKAVIKGYVGHNLK 117

Query: 99  -LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155
             D S++   V L + ++   +Y   A+   ++T++   +P+  T   +           
Sbjct: 118 VKDGSADQKDVILFNGADQSLSYMLSAKETNINTSDLYFVPSQVTDSTVTFTANAGEGKT 177

Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
           + L +    + +    +S           T T +   + +   + R    + + AT T+ 
Sbjct: 178 LTLKYVLGKDYMLHMQLSAQGMAGLFSPGTQTMDVNWKDKVRQQERGFTFENRYATLTY- 236

Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275
             +            E               +   W+   ++++++V I   +   ++  
Sbjct: 237 -HKSEGGTDYLNEGKEITD--------EAIEDKIDWIAFKNQFFSAVMIAKNDFQNNALM 287

Query: 276 KYLSDGHARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHY------EKDLAI 327
             +         K    ++     P     +    + G  +F  +          KDL +
Sbjct: 288 TSIPQEKGSGYLKQYEAKMKTFFDPTGKQASEFDFYYGPNDFRLLQKMEGECHFGKDLQM 347

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
            R   L    +          +  +   +  N GI ++L T+ +KLL +P+ KK Y+S+A
Sbjct: 348 QRLVYLGWPLFRIINRWFTLYVFDFLTGMNINMGIVLILITLLLKLLTYPMVKKSYMSSA 407

Query: 388 NMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            M+ ++PK+DE  ++F +   Q+  Q+AM+  Y  + ++PL+GC P+L+Q P++ A++  
Sbjct: 408 KMRVLKPKLDEATKQFNKPEDQMQKQQAMMSEYAKYGVSPLSGCLPMLIQAPIWIAMFNF 467

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQ 504
           +  ++++R    + WIKDL+  DP   +     L         +   +  ++ ++    Q
Sbjct: 468 VPNAIQLRGES-FLWIKDLSTFDPIWEWNHNIWLIGDHLSLTCILFCVANVLYTVMTMRQ 526

Query: 505 MKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            K         Q  ++ WM    PV+F F  + + AGL  Y+  S   S      + +  
Sbjct: 527 QKDQMVGQQADQMKMMQWMMFLMPVMFFFMFNDYSAGLNFYYFVSLFFSAAIMWAL-RKT 585

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
             +  L+  L   + +N  +
Sbjct: 586 TNDEKLLAILEQRYQENKAN 605


>gi|154494956|ref|ZP_02033961.1| hypothetical protein PARMER_04002 [Parabacteroides merdae ATCC
           43184]
 gi|154085506|gb|EDN84551.1| hypothetical protein PARMER_04002 [Parabacteroides merdae ATCC
           43184]
          Length = 638

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 118/631 (18%), Positives = 243/631 (38%), Gaps = 75/631 (11%)

Query: 1   MERNWNYFVAIALS--VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M+   N  +   L   V+IV+ W      P  E++  +R+   ++ +            +
Sbjct: 1   MD--KNTIIGFLLIGIVLIVFTW---LNQPTPEQIEAQRRMQDSIARIEYAKQLEQQKEL 55

Query: 59  DDRAQA---------------------------LSMSPRVELKNPSLIGSINLKGAQFDD 91
           +  A+A                           +       L+N  +   +  KG +   
Sbjct: 56  NREAKADDELAGLPDSVRLARLQNTFGVFADAMVGEEGSTVLENELIEVRLANKGGRIGY 115

Query: 92  LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151
           + L+ Y    +     + L    ++      + D+     +  + N+  ++         
Sbjct: 116 VRLKKYD---NYKGEPLVLFDEKDS------KFDFTLVTADNRVVNTGDLYFTPVKGNDR 166

Query: 152 PTTPIKLVFKNANNILFERTISLDEHY-LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210
            +  ++L     +++ F  T+  D++   F I  T  N  +     +      +   Q  
Sbjct: 167 NSITMRLNTGEGSHLDFMYTLKPDDYMLQFSIKGTGLNGVLSPGTTALDLLWQQKITQQE 226

Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270
                 ++ +  V       + +Y    K+          W+   D Y++S+ I   E  
Sbjct: 227 KGR-KFEDRYATVYYKFMADDVEYLSETKNDSKQLSNRLKWVAYKDMYFSSILIAGNEGF 285

Query: 271 FHSQFKYL---SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327
             +         DG    + K + +    L G   T     + G  +F  +  Y+ D+  
Sbjct: 286 ESTTIDSKMLPEDGSFLKEYKTTTSVPFDLKGNEAT-DMRFYFGPNQFSLLKSYDDDVEK 344

Query: 328 P---RFEMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381
                 E ++  GW    +     +  L ++    + ++G+ I L TV VKL+ FPL  K
Sbjct: 345 ADQLDLEKIVPLGWGIFRWVNQYFVIPLFNFLGQFIHSYGLLIFLLTVIVKLILFPLTYK 404

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQIPVF 440
            Y+S+A M+ ++P+++EL  K+      V ++ A+++LY     +P+AGC P+LLQ+P+ 
Sbjct: 405 SYMSSAKMRVLRPQVEELNAKYPGQDKAVERQRAIMELYSRAGASPMAGCVPMLLQMPIL 464

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSL 499
            A++     ++E+RH   + W  DL+  D    +  +  +P   P F  H+ ++ ++M++
Sbjct: 465 VALFMFFPSAIELRHQS-FLWAHDLSTYDAIVSWNTY--IPIITPYFGNHISLFCLLMTV 521

Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVV----------FVFALSSFPAGLIIYWSWSNVIS 549
           +  I  K +    + GQ      MP +           +   + + +GL  Y+  S +I+
Sbjct: 522 TNIIYTKFNMDQTNTGQQQ----MPGMKAMMYMMPLMMLVFFNQYASGLTYYYFISTLIT 577

Query: 550 IVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           I+Q  VI +    E  L+ +L     K    
Sbjct: 578 ILQT-VIFRYTINEDKLLAKLEENKKKPMKK 607


>gi|163782852|ref|ZP_02177848.1| hypothetical protein HG1285_15991 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881973|gb|EDP75481.1| hypothetical protein HG1285_15991 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 514

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 108/570 (18%), Positives = 216/570 (37%), Gaps = 74/570 (12%)

Query: 3   RNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
                F+A+ L   ++  +      F+     + +  E+      KQ             
Sbjct: 9   DPKRIFIAMTLVAFLLLGYEIFSSFFFKGTPQQPVQQEKTEEPVKKQETPGGKKVEEPPT 68

Query: 59  DDRAQALSMSPRVELKNPSLI-----GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
                  +       +            I+ KG +            V        +   
Sbjct: 69  PQLMLGTTREKHKPAETLKYSMGGFSVEISPKGGKIVSF--------VDEQFGFDLITDA 120

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
               N Y  E+       + +L   N        +++      K+           + + 
Sbjct: 121 EKKLNVYPLEIYTGDPDIDYDLNFGNYSVERKDNRLILTFRKGKI--------KLTKELE 172

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
             + Y+             +     +  ++        + +  +   + + G+      +
Sbjct: 173 FKDAYVLL---------TVKGDLDKKFYVLVGTHPFEQSFYTHEGPVLKLNGEV----VR 219

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
               + S       +  + G   +Y+   F  + +    ++  Y  +G    +       
Sbjct: 220 IDKDDVSKREFIEGNIEFAGEESRYFFKGFKGNIKRVVINKVNYKPEGEEGEKEITFTYV 279

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
               P         L+ GAK +  +            E L+DWG      KP+F+ M + 
Sbjct: 280 GYEEP-------LTLYMGAKYYSRLREL-------GLEDLLDWGMLKVAVKPLFIFMYWV 325

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           Y   G++ ++I++ T  ++++FFPL  K   S   ++   P+++++++K+K  P ++ Q+
Sbjct: 326 YEHTGSWVLSIVILTFLLRVVFFPLNYKSTTSMMKLQQAAPQLEKIKKKYKDDPAKM-QQ 384

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            M++LY     NP++GC PIL+QIPVFFA+YKV+ I+++++      WI  LA  DP   
Sbjct: 385 EMMKLYSEIGFNPMSGCLPILVQIPVFFALYKVLIITVDLK-LSGMLWIPSLADKDPFY- 442

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533
                             I P+IM L+M +Q K++P P D  Q +I+    V F F  +S
Sbjct: 443 ------------------ILPVIMGLTMILQQKVTPNP-DPKQNLIMYISAVAFTFLFAS 483

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL++YW+ +N+++I Q  +I  +   +
Sbjct: 484 FPSGLVLYWTVNNILNIGQNYLIKNVMLKK 513


>gi|196229389|ref|ZP_03128254.1| 60 kDa inner membrane insertion protein [Chthoniobacter flavus
           Ellin428]
 gi|196226621|gb|EDY21126.1| 60 kDa inner membrane insertion protein [Chthoniobacter flavus
           Ellin428]
          Length = 552

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 106/553 (19%), Positives = 209/553 (37%), Gaps = 58/553 (10%)

Query: 37  RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96
                    P               A          L   S+  +   +GA      L+ 
Sbjct: 2   PPAGTPAGTPAGTPGETKPAAPAAPAAPAVPEKTETLDTDSVAYTFTTRGAGIAKALLKK 61

Query: 97  YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVW-NLISGKILTPTTP 155
           +  +               T N +        T    ++ N    +   +   ++T    
Sbjct: 62  HEAEHG----------TRMTLNEFGDMPIGSVTDLPGQISNVAFHYATDLPAGVITFEGS 111

Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-- 213
            +            ++ +L++ Y+  +     N S   I                     
Sbjct: 112 DERGLHLTKKFNVPKSTNLNKDYIVTMRLVFDNRSKQPITVPAYYVNTGSAAPVHQKDRI 171

Query: 214 -FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
            +   +   A   D +         E  + +  HE   W  ++D+Y+ ++  P  ++   
Sbjct: 172 DYTGFKWPGAKFVDVTWFSGGMFKKEHGTYTATHEGIPWAAVADQYFTTIVTPQVDSENK 231

Query: 273 SQ-----------------------FKYLSDGHARYQAKFSA----NEITILPGKSITTT 305
                                      + +DG +  +            T+ PG+     
Sbjct: 232 DTPSKERGNSVWATRFQISDDVWKATSHDADGSSSARYGIEGALGMPGFTLAPGQMQVQI 291

Query: 306 NFLFAGAKEFPTIHHYEKDL----AIPRFEMLIDW--GWFYFIAKPMFMLMSYFYNLVGN 359
             ++ G +E+  +           A   F  +  +   +  F +K +   ++  +  VG+
Sbjct: 292 FHIYTGPREYGRLKTMPDGQVEVLAFSDFGGIFSFLGPFVGFFSKVLLYSLNSLHAWVGS 351

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           + IAI++ T+ +K + +P+  K   +   M+ + PK+ E+REKF+   PQ +   +++LY
Sbjct: 352 YAIAIIIITLLIKAILWPMQNKATKAAKRMQALSPKMTEVREKFQD-DPQKMNAEVMKLY 410

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           K + +NPLAGCWP  +Q+P+FF  Y ++  ++E+R+A  + W++DL+  D   +F L G+
Sbjct: 411 KEYGVNPLAGCWPAFIQMPIFFGFYNMLGKAVELRNA-KFLWVQDLSQPD--TVFHLPGL 467

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539
                     V I PI M+ +M  QMK SP   D  Q  I+  MP++FV    ++ + L 
Sbjct: 468 D-------FPVNILPIFMAATMVWQMKASPKTGDPQQQKIMMIMPLIFVLFCYNYASALA 520

Query: 540 IYWSWSNVISIVQ 552
           +Y + +N++S+VQ
Sbjct: 521 LYLTVNNLVSVVQ 533


>gi|312891415|ref|ZP_07750932.1| membrane protein insertase, YidC/Oxa1 family [Mucilaginibacter
           paludis DSM 18603]
 gi|311296109|gb|EFQ73261.1| membrane protein insertase, YidC/Oxa1 family [Mucilaginibacter
           paludis DSM 18603]
          Length = 609

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 106/598 (17%), Positives = 224/598 (37%), Gaps = 42/598 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N +  + L ++I++    + + P   ++  E+  I           +   V   D
Sbjct: 1   MD--KNTYTGLFLIMLILFG-SFYLMRPSEADIKKEKARIHQDSLNKAGIKTTPVVAKTD 57

Query: 61  RA-----------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            A                   +     + L+N  L   ++ +GA+   + L+ +      
Sbjct: 58  SAKKPQVIDSAVLKSAFGAATVGTEQLITLENNDLRVKVSTQGARVQSVELKNFKTF--- 114

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLIS-GKILTPTTPIKLVFKN 162
           +   + L   +N        L++++    I   +     +          +  I      
Sbjct: 115 DKKPLILFDGANNHFG----LNFIAGNKKINTNDLYFKPSATGLNVTGHDSYSITFRLNY 170

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ--TATNTFGVQEGF 220
           +     +   +L        +    N   + I  S    I        T  +    ++  
Sbjct: 171 SATQYIDYVYTLSAKGYRLGLTLKLNGLDNVIADSKIVDINWQSSMLKTEKDMTMERQYS 230

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
                +      + S  +  +     +   W+     ++++V I     +  S      D
Sbjct: 231 TVYFKNTDDDVDELSVTKDDAKDISDKKIQWVSFKQHFFSNVLIYKDGFT-KSSLHVSLD 289

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
              + + K     + I    +       + G  EF  +    +   + +   L      Y
Sbjct: 290 TANKTEVKQMQASLQIPANNAGVYPLDFYYGPNEFKVLK--AQGYNLDKQIDLGWGPLKY 347

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                + ++  +      N+GI I+L TV +KL+  PL  K Y+S A M+ ++P++DE++
Sbjct: 348 INKYAVLVVFDFLKQFGWNYGIVILLLTVLLKLVLSPLTYKSYLSMAKMRVLKPEMDEIK 407

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
            K  +  P +LQ+  ++LYK   +NPL GC P++LQ+P+ FA  +      E+R    + 
Sbjct: 408 AKVGEDNPTLLQQEYMKLYKKAGVNPLGGCLPMVLQLPIVFAFLRFFPALFELRGES-FL 466

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-- 518
           W+KDL+  D    F     L        H+ +  ++M++S FI    +   +     M  
Sbjct: 467 WMKDLSTYDDLIKFGTTIPLLGD-----HLSLMCLLMTISTFIYTYFNNQISGATGQMKY 521

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
           I    PV+F+  L+ +P+GL  Y+  +N+++  QQ +I ++   +  +  +++    K
Sbjct: 522 IGYITPVIFIVVLNKYPSGLNYYYFLANMLTFAQQYLI-RLMVDDKKIHAQIQENKKK 578


>gi|261416142|ref|YP_003249825.1| membrane protein insertase, YidC/Oxa1 family [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|261372598|gb|ACX75343.1| membrane protein insertase, YidC/Oxa1 family [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|302327500|gb|ADL26701.1| inner membrane protein, 60 kDa [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 616

 Score =  205 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 110/630 (17%), Positives = 218/630 (34%), Gaps = 70/630 (11%)

Query: 4   NWNYFVAIALSVIIVYAWQNFYVYPR-------------IEEMNNERKNIQTVKQPNQVD 50
           N N  +   L  +IV  W                       E      + +++  P++  
Sbjct: 2   NKNTLIGSILIAVIVIWWMAVNNANAEAQAAARAAQAKAKTEKQVAADSAKSLVIPSKTP 61

Query: 51  NSYAAV-----------------LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93
              AA                        +A      V ++    I ++  KGA+   + 
Sbjct: 62  EIKAAPVLGGTDERRETKDESVDSAKVAPKAEIAERSVTVETDKFIMTLTNKGAKVKSII 121

Query: 94  LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153
           ++       S      L+  +            +   N         + N  +  ++  +
Sbjct: 122 VKALP---DSTGKFPELIQDTT------LGAFDLKLDNADLSEAMFELGNTPAKIVVNDS 172

Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRI----MRHKPQT 209
             ++  F++AN     R+    +     +             +    +         P++
Sbjct: 173 AKVQFAFQDANGNQVIRSYGFTKEGP-AVRQENKFIGFQPTAYELAWKGGLKETEDIPKS 231

Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS---WLGISDKYWASVFIPS 266
                    G                       ++F+ +     W G+  KY A      
Sbjct: 232 KGIMGIGGGGTYYFSEVVFNDRYSVEREMPREQASFNATEGKIVWAGLRRKYVAMTVQFD 291

Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326
           +      + K +    +          I      + + +  L     ++  +    KD  
Sbjct: 292 EAVPAVLKTKPMKVEDSEVDPGTYKLTIADDFRGAQSLSYDLMILPLKWDELSALNKDYE 351

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNL---VGNFGIAIMLTTVFVKLLFFPLAKKQY 383
                     G   +      ML+         + N+G+AI+L T+ V+ +  P   KQ 
Sbjct: 352 KIIVSGWSWCGADVWFVWICKMLLKLLNLFYSIIPNYGVAIILVTLIVRGVTTPFTVKQI 411

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA----GCWPILLQIPV 439
            ST  M  ++P++DE+  K++ + PQ  Q AM++LY  +NINPLA    GC P+L+Q+P+
Sbjct: 412 KSTRGMAALKPQLDEINVKYR-TDPQKKQAAMMELYSKNNINPLASCTGGCLPMLIQMPI 470

Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           F  ++ V+  ++E+R AP + WI DL+ +D   +      +P  +P    + I P +M  
Sbjct: 471 FMGLFFVLGRAIELRGAPAFLWISDLSRSD---VVWNGISIPIIMPS--GLAILPWLMVA 525

Query: 500 SMFIQMKMSP---PPADKGQAMILNWMPVVF-VFALSSFPAGLIIYWSWSNVISIVQQAV 555
           + + Q K++       D  Q  ++ WM     +   +  P+GL++YW   N+ SI Q   
Sbjct: 526 TTYFQTKVTMGANAGMDPAQQKMMVWMMPAMMLLFSAVMPSGLVLYWIIGNIWSIAQYKY 585

Query: 556 IMKM----HGAEIGLIDRLRSTFSKNYNSQ 581
           I       +G +     +L+       +++
Sbjct: 586 IYSKFPPVNGNKPAASSKLKG--KNVKDAE 613


>gi|288927879|ref|ZP_06421726.1| inner membrane protein OxaA [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330713|gb|EFC69297.1| inner membrane protein OxaA [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 627

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 111/610 (18%), Positives = 231/610 (37%), Gaps = 48/610 (7%)

Query: 4   NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ--------------- 48
           N N  +   L  +++  +  +      E    ++K +   K   +               
Sbjct: 2   NKNNLIGFILIGLVLIGFSLWNRPSEEELAKQQQKELIEKKNKEEQTKAKAKADAARAQA 61

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
           ++ +            +  +  + LKN  L   +N KG   D + +  +          +
Sbjct: 62  LEQATTDTAALFHKALIGEAKPIVLKNSKLTLQLNTKGGVVDKVIISNFTDRNGHKDLTL 121

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
                 +    +  +  YVSTA+    P+  T   +           + + +   N  + 
Sbjct: 122 FQGKDQSLNYTFSTKDGYVSTADLFFTPSEVTDTTVTFTAEAAAGKTLTIKYVLDNEYML 181

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
             +IS             T +   Q R + + +    + + A+ T+   EG    L + S
Sbjct: 182 HTSISATGMGGILNPSVNTVDINWQERCAQQEKGFTFENRYASLTYHKTEGGTDYLSESS 241

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
               +             +   W+   ++++++V I   +   ++    +         K
Sbjct: 242 EKIDE----------VIEDKIDWVAFKNQFFSAVMIAKTDFGTNATLTSIPQEKGSGYLK 291

Query: 289 FSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWFYFIA 343
               ++     P  S  T    + G  +F  +   E      +    E L+  GW  F  
Sbjct: 292 QYQAKLKTAFDPTGSQPTQLDFYYGPNDFRLLQKMESKSHFGKDLELERLVYLGWPLFRI 351

Query: 344 KPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
              +  +  F  L     N G+ ++L T+ +K + FPL KK Y+S+A M+ ++PK++E  
Sbjct: 352 INRWFTLYVFDWLTGLNINMGVVLILITLLLKFITFPLVKKSYLSSAKMRVLKPKLEEAT 411

Query: 401 EKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           ++F +   Q   Q+AM+  Y  + ++PL+GC P+L+Q+P++ A++  +  ++++R    +
Sbjct: 412 KEFNKPEDQMKKQQAMMSEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGES-F 470

Query: 460 GWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
            WIKDL+  DP      NI+ +   L      F    +   +M      Q +        
Sbjct: 471 LWIKDLSTYDPVLEWGHNIWLIGDHLSLTCILFCLSNVLYSMM---TMRQQRDQMVGQQA 527

Query: 515 GQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
            Q  ++ WM    PV+F F  + + +GL  Y+  S   S     ++ +    +  L+  L
Sbjct: 528 EQMKMMQWMMYLMPVMFFFMFNDYSSGLNFYYFVSLFFSAAIMWLL-RKTTNDEKLLSIL 586

Query: 571 RSTFSKNYNS 580
            + + +  N+
Sbjct: 587 EANYKEAQNN 596


>gi|310825627|ref|YP_003957985.1| inner membrane protein, 60 kda [Stigmatella aurantiaca DW4/3-1]
 gi|309398699|gb|ADO76158.1| Inner membrane protein, 60 kDa [Stigmatella aurantiaca DW4/3-1]
          Length = 607

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 118/594 (19%), Positives = 206/594 (34%), Gaps = 63/594 (10%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK--------------NIQTVKQPN 47
           +       A+ +S   +  +  F                             +       
Sbjct: 13  DSQKRMLTALGVSFAAITIYMMFLAPTAPTAPEPGAADAGVAAGAADGGTLAVPAPPPGG 72

Query: 48  QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH----LDVSS 103
                 A     +    +    R   +      + + +GA F    L+G        +S 
Sbjct: 73  GTPELAAGESPPEPEAPVRTLERTRQEA---KYTFSSEGAGFTSAVLQGPKMREQQSLSV 129

Query: 104 NSPIVTL----LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159
                 L    L P    N            +      S    N            +   
Sbjct: 130 AEGYKELFGAELLPPPQMNLVQPVPGQPLPLSVSIEGTSPLPANARYQVQEAGEGTVVFT 189

Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
            +     + +R    +  +       V N S   +    R    R       +      G
Sbjct: 190 TRRGPWEVVKRVQWPNAGHELTYTVQVHNTSSQPLTGELRVHHNRAIDPNFEHAPSFFGG 249

Query: 220 FIAVLGDKSLVEQKYSDIEKSSI--SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
                     V +K             F     + GI  +Y+ S+  P +          
Sbjct: 250 VGNQSRAACHVGEKLHKRVPEDEASETFSGPVHYFGIDQQYFLSMLYPLEAPREGHCVLT 309

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH-----------HYEKDLA 326
            +    +    F    +T+  G+++T     + G K+   +                   
Sbjct: 310 ATPTVRQVAVGF---PLTVGAGETVTVRFGGWFGPKDPDLLKPVPSQEVLSAAGMTAAAW 366

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            P  E  +D+G +  I K +   M +F+ + GN+G+AI+L TV VKL+  PL  K  V  
Sbjct: 367 DPTIEETVDFGIWAVICKLLLFFMKWFHAVTGNWGVAIILLTVLVKLVLLPLTYKSMVGM 426

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
             +K +QPK++E+R+KF +   + +   +++LY+   +NPL GC P+L+Q+PV+ A++  
Sbjct: 427 EAVKELQPKMEEIRKKFAE-DRERMNMEVMKLYQQAKVNPLGGCLPLLIQMPVWIALFTA 485

Query: 447 ISISLEMRHAPFWGW-IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
           +  S ++   PF+G   +DL   DPT                    + P+ + +SM I  
Sbjct: 486 LRNSFDIYWEPFFGPVWRDLTYKDPTY-------------------LLPLALGVSMIITQ 526

Query: 506 KMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           KM P   D  QA I+ W MP++F   L  +PAGL +Y   +N++SI QQ  + K
Sbjct: 527 KMQPQMMDAAQARIMIWVMPIIFTLTLLQYPAGLSLYIFTNNLLSIGQQWGLRK 580


>gi|313674427|ref|YP_004052423.1| membrane protein insertase, yidc/oxa1 family [Marivirga tractuosa
           DSM 4126]
 gi|312941125|gb|ADR20315.1| membrane protein insertase, YidC/Oxa1 family [Marivirga tractuosa
           DSM 4126]
          Length = 617

 Score =  204 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 115/607 (18%), Positives = 212/607 (34%), Gaps = 64/607 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ---PNQVDNSYAAVL 57
           M+   N    + L  I++ A+  F+     +  N E   ++   Q        N+  A  
Sbjct: 1   MD--KNQATGLILISILMIAYFWFFADAPQQPENIESNQVEQNDQQQKETTASNTNQAAA 58

Query: 58  IDDRAQALS----------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL-- 99
           + +   +L+                 S        ++    N KG +   + L+ +    
Sbjct: 59  VIESDSSLNRSLVNQFGAFAGVAKGESQISTFNTETIAIQFNSKGGKVKSVELKDFKTFD 118

Query: 100 ------DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153
                     +     L + +  +   +     +  +    L N               T
Sbjct: 119 GQPLIITNEEDEEKELLFNTAAGEVNLYDLYFEMQGSPKRNLSN-------------GDT 165

Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213
             IK V + A N   E+  +L  +          N   ++I           K +     
Sbjct: 166 IQIKFVAQVAPNKSIEQIYTLSGNQYQVGYSLAFNGFTNEILGDQLTLRWNKKMRKFEKD 225

Query: 214 FGVQEGFIAVLGDKSLVEQK-YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE-TSF 271
                  + +    +       S+          E   W      ++    I        
Sbjct: 226 LEQSRTKVTMNYYSTEEGMDGLSERSDDDSEEVAEPVKWFSFKQNFFMEALITDIPMKRA 285

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
                         +   +  EI +    +       + G   + T+         P FE
Sbjct: 286 EFATDIEDLSDEYVKRGKAKVEIPLSEVSNRAGEFKYYFGPNNYKTLQKVA-----PDFE 340

Query: 332 MLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
             +  GWF         +  +       + ++G  I++  + +KL   PL+ K YVS A 
Sbjct: 341 ENVYLGWFPISLVNKYVIINVFYILEKYISSYGWIIIILVLLIKLALSPLSYKSYVSMAK 400

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
            K ++P++DE++EK      Q  Q   + LY+   +NPL+GC P+LLQ+P+ FA++    
Sbjct: 401 TKVLKPQLDEIKEKH-GGDMQKAQADQMDLYRKVGVNPLSGCIPLLLQMPILFAMFYFFP 459

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI---QM 505
            S+E+R    + W  DL+  D  ++ +L   +PFY     HV ++ I+M+LS  +     
Sbjct: 460 SSIELRQES-FLWATDLSTYD--SVLSLPFEIPFYG---DHVSLFTILMTLSTLLITWSQ 513

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
                        I  +MPV+F+F L+SFPA L  Y+  +N+I+  QQ +I +    E  
Sbjct: 514 GQVSSVQGPM-KNIQYFMPVIFMFVLNSFPAALSFYYLIANLITFGQQTLI-RRMIDEDK 571

Query: 566 LIDRLRS 572
           +   L  
Sbjct: 572 IKQILEE 578


>gi|189501692|ref|YP_001957409.1| putative inner membrane protein translocase component YidC
           [Candidatus Amoebophilus asiaticus 5a2]
 gi|254772744|sp|B3ER28|OXAA_AMOA5 RecName: Full=Membrane protein oxaA
 gi|189497133|gb|ACE05680.1| hypothetical protein Aasi_0237 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 596

 Score =  204 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 100/575 (17%), Positives = 211/575 (36%), Gaps = 33/575 (5%)

Query: 21  WQNFY----VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNP 76
           + +F+         +    E  +  +  Q    + +              ++  + L+N 
Sbjct: 19  YTHFFDNKLPKTSQQTTTQEVAHNTSNIQLQTSEATLNLQTGIFAKATQGVTKDIILENK 78

Query: 77  SLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELP 136
            +  +++  GA+  ++ L+ Y   +      + LL   +T   +    +  S   N    
Sbjct: 79  DIRVTLSSHGAKVKEVILKQYKDYLG---KPLKLLDEQSTNMGFQFTSNQASINTNTLFF 135

Query: 137 NSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRF 196
           N++                +  +        + + +       + +         +    
Sbjct: 136 NTDDT---DQYIQQASIGKVTFMIPLGEPNQYLQQVYTLPSEGYALTQNWEFVGTENYID 192

Query: 197 SPRGRIMRHKPQTATNTFGV---QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253
             +   + H               +  I         +      E+           WL 
Sbjct: 193 QGKIDFVWHDFIKRAEKDVQACRNKTTINYYLANKTFKHLKEHTEQKEEQTIQTPIQWLA 252

Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT--TNFLFAG 311
           I  +++ +     +     +     +    ++  +                  T   + G
Sbjct: 253 IKQRFFTAGIFTDQPFESGNILLKPTTQPDKFVKEAYTTVSLASNNLQPIQKGTFRFYFG 312

Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368
              +  ++ + +      F   +  GW    +     +  + S+    V N+G+ I++  
Sbjct: 313 PNTYKDLNSFAQ-----GFSKNLPLGWPIVKWINLYLIIPIFSFIEKYVSNYGLVILILV 367

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428
           +F+KLL  PL+ K Y+S A MK ++P +D L+ K+     Q +Q   ++LY+   INPL+
Sbjct: 368 IFIKLLLLPLSYKSYISMAEMKVLKPTLDALKAKYGN-DMQSVQMEQVKLYREMGINPLS 426

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           GC P+LLQ+P+  A++     ++++R    + W  DL+  D   I  L   +PFY     
Sbjct: 427 GCIPVLLQMPILLAMFNFFPNAIDLRQK-AFLWAPDLSTYD--AIINLPFQIPFYGS--- 480

Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKG--QAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546
           HV ++ ++M+ S  +    S            +   +P+ F+F L+SFPAGL  Y+  SN
Sbjct: 481 HVSLFTLLMTASTILYTWSSNQVNTPQGPMKTMSYLLPITFMFILNSFPAGLSFYYFVSN 540

Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           + +  QQA+I K    E  +  +L     K+ N++
Sbjct: 541 LFTFAQQALI-KRFVNEDKIKAKLAKNKEKSANNK 574


>gi|120436565|ref|YP_862251.1| putative inner membrane protein translocase component YidC
           [Gramella forsetii KT0803]
 gi|117578715|emb|CAL67184.1| inner membrane protein OxaA [Gramella forsetii KT0803]
          Length = 616

 Score =  204 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 98/609 (16%), Positives = 220/609 (36%), Gaps = 61/609 (10%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYP------------RIEEMNNERKNIQTVKQ 45
           ME         +   L   ++  W  +   P            ++E+   + +       
Sbjct: 1   MEEKKIDVQSIIGFILIGGLLL-WMLYNNTPEETETENSTTTEQVEQEPRDNQVTTNNSN 59

Query: 46  PNQVDNSYAAVLID--------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97
            +Q ++S +                   +      + N  L   I+ KG   ++  L+ +
Sbjct: 60  TSQTNDSTSLADAQRRLGAFGYSETLTSAQGGSTTISNDLLELKISNKGGYIEEARLKNF 119

Query: 98  HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157
                 +S  + L+   N             T N   L     +      +I      +K
Sbjct: 120 KT---YDSIPIYLIKDGNASLNMSFTTTDGRTLNTENLYFEPELTESNGNQI----LSMK 172

Query: 158 LVFKNANNILFERTISLDEHY-LFKIVDTVTNN-SIDQIRFSPRGRIMRHKPQTATNTFG 215
           L       + +   +   E+   F +               +   ++  ++   + +   
Sbjct: 173 LKVSEDEYLEYRYAMRPGEYMLDFSVRSEGLTGVLNSAETPTLDWKLKGYRHAKSISYEN 232

Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ- 274
                I              + +   IS       ++     +++S+ +        S  
Sbjct: 233 RYTDLIYEYDGGDDDSVSDGEDDDEDIS-------YIAYRQHFFSSILLTDNPFKTSSFK 285

Query: 275 ---FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
                   +    +   F++     L    +      + G  ++  ++ Y  D  +    
Sbjct: 286 VENLVEDEEVDTVFTKTFASTIPLELKAGELNYNMNWYYGPSDYKILNDY--DRNLDEIV 343

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
            L    + +          ++    + ++GIAI+  T+ V+++  P+  K Y+S A MK 
Sbjct: 344 PLGWGIFGWINKYIFIPFFAFLAGFLPSYGIAIIAMTIVVRIVLSPVTYKSYLSQAKMKI 403

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           ++P+I+EL EK+K +  +  Q+  ++LY     +P++GC P L+QIPVF+A+++    + 
Sbjct: 404 LKPEINELNEKYKDNAMKK-QQETMKLYSKAGASPMSGCLPALMQIPVFYALFQFFPSAF 462

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---- 507
           ++R    + W  DL++ D   +  L   + FY     HV ++PI+ S+++F+ M M    
Sbjct: 463 QLRQKS-FLWADDLSSYDV--VAELPFHIWFYG---DHVSLFPILASIAIFVYMMMTTGQ 516

Query: 508 ----SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
               +  P       ++   P+  +   +++ +GL +Y+  SN+I+I    VI      E
Sbjct: 517 SMQANQQPGMPNMKFLMYLSPLAMLVFFNNYASGLSLYYFTSNLITIGIMLVIKYAIIDE 576

Query: 564 IGLIDRLRS 572
             +  +++ 
Sbjct: 577 DKIHAKIQE 585


>gi|261879826|ref|ZP_06006253.1| inner membrane protein OxaA [Prevotella bergensis DSM 17361]
 gi|270333484|gb|EFA44270.1| inner membrane protein OxaA [Prevotella bergensis DSM 17361]
          Length = 636

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 114/613 (18%), Positives = 232/613 (37%), Gaps = 49/613 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  +   L  +++  +  +Y  P  EE   +                 A      
Sbjct: 1   MD--KNSLIGFVLIAVVLIGFS-WYAQPSEEEQRAQFVKDSIAHVNRAKAEKDAKAAAFK 57

Query: 61  RA-----------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
           R                       +  V LKN  L  + + KGAQ     ++ Y  +++ 
Sbjct: 58  RQQAARQQVQEDTTALFHHALTGQAQDVVLKNDKLELTFSTKGAQVKKAVVKNYKDNITE 117

Query: 104 NSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161
               VTL         Y   A+   +STA+     +  T   ++          I++++ 
Sbjct: 118 KKD-VTLFQGDEQSIEYMLVAKEANISTADLFFQTSEVTDSTVVFTAEAGAGKTIRMIYS 176

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
             ++ L      +         +T T     Q +   + +    + + AT T+   +G  
Sbjct: 177 LGDSYLLRMKFQVSGMAGLFAPNTSTMAINWQDKVRQQEKGFAFEARYATLTYHESDGGT 236

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281
             L   +    +             ES  W+   ++++++V I       ++    +   
Sbjct: 237 DYLNASNEKIDE----------EIKESIDWVAFKNQFFSAVMIAKDNLGTNTLMTSIPQE 286

Query: 282 HARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDW 336
                 K    ++     P  +  T    + G  +F  +   E++ A  +    E L+  
Sbjct: 287 KGSGYLKQYQAKMKSFFDPTGNTPTEFEFYYGPNDFRLLQSVEEESAFGKDLQMERLVYL 346

Query: 337 GWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           GW  F     +  +  F  L      GI ++L T+ +K + +P+ KK Y+S+A M+ ++P
Sbjct: 347 GWPLFRIINRWFTIYVFDWLSKWFPMGIVLILITLLLKAITYPMVKKSYMSSAKMRVLKP 406

Query: 395 KIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           K+D   ++F +   Q+  Q+AM+  Y  + ++PL+GC P+L+Q P++ A++  +  ++++
Sbjct: 407 KLDAATKQFDKPEDQMQKQQAMMAEYAKYGVSPLSGCLPMLIQAPIWIAMFNFVPNAIQL 466

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMKMSPPP 511
           R    + W+ DL+  DP   +     L         +      II S       K     
Sbjct: 467 RGES-FLWMDDLSTYDPILQWNTNLWLIGDHLSLTCILFCGAQIIYSWFTMQMQKDQMVG 525

Query: 512 ADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
               Q  ++ W    MP++F F  + + +GL  Y+  S ++S      +++    E  L+
Sbjct: 526 QQAEQMKMMQWMMYLMPLMFFFIFNDYSSGLNFYYFVSLIMSAAI-MFVLRKTTNEEKLL 584

Query: 568 DRLRSTFSKNYNS 580
             L + + +N N+
Sbjct: 585 AILEARYKENQNN 597


>gi|281420428|ref|ZP_06251427.1| inner membrane protein OxaA [Prevotella copri DSM 18205]
 gi|281405573|gb|EFB36253.1| inner membrane protein OxaA [Prevotella copri DSM 18205]
          Length = 645

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 106/616 (17%), Positives = 246/616 (39%), Gaps = 52/616 (8%)

Query: 4   NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-----------RKNIQTVKQPNQVDNS 52
           N N  +   L  +++  +  +Y  P  EE                +  +  K       +
Sbjct: 2   NKNNIIGFLLIAVVLIGFS-WYNQPSAEEQRAAFVQDSIAKAKHAEMEKASKSAAAKRQT 60

Query: 53  YAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------LD 100
            A   ++  + AL        + ++ LKN  +  ++N KGA  +   ++GY        D
Sbjct: 61  NAKAKVEADSTALFYSALKGQAKKIVLKNEKVELTLNTKGATVEKAVIKGYVGHNLQVKD 120

Query: 101 VSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158
            S+++  VTL   ++    +   A+   + T++    P++ T  ++    +      + L
Sbjct: 121 GSADAKDVTLFDGNDQSLKFMLEAKEANIITSDLYFTPSNVTDKSVTMTAVAGEGKTLTL 180

Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218
            +   ++ +   ++  +        +    +     +   + R    + +  T T+   E
Sbjct: 181 TYTLGDDYMLHMSLQANGMADLFSPNYNKMDVDWSDKARQQERGFMFENRYTTLTYHNAE 240

Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
           G    L + S    +             E+  W+   +++++++ +        +    +
Sbjct: 241 GGTDHLNEGSEKIDE----------KIEETIDWVSFKNQFFSAIIVAKDNFEKDAFMTSI 290

Query: 279 SDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEML 333
                    K    ++     P     +    + G  +F  + + EK+    +   F+ L
Sbjct: 291 PQEKGSGYLKQFQAKMKTAFDPTGKKASEFEFYFGPNDFQILKNTEKESTFGKDLEFQKL 350

Query: 334 IDWGWF--YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           +  GW    +I +   + +  + + V   GI ++L T+ +KL+ +P+ KK Y+S+A M+ 
Sbjct: 351 VYLGWPIIRWINRFFTLYVFDWLSNVFPMGIVLILITLLLKLITYPMVKKSYMSSAKMRV 410

Query: 392 IQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           ++PK++    ++ +   Q+  Q+AM+  Y  + ++PL+GC P+L+Q+PV+ A++  +  +
Sbjct: 411 LKPKLEAATAQYNKPEDQMQKQQAMMAEYAKYGVSPLSGCLPMLIQMPVWIAMFNFVPNA 470

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKMS 508
           +++R    + W+ DL+  DP   +     L         +   +  ++ S     Q +  
Sbjct: 471 IQLRGE-KFLWMNDLSTFDPIFEWNTNIWLIGDHLSLTCILFCVANLLYSWMTMRQQRDQ 529

Query: 509 PPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
                  Q  ++ WM    P++F F  + + AGL  Y+  S   S      + +    + 
Sbjct: 530 MVGQQAEQMKMMQWMMYLMPLMFFFMFNDYSAGLNFYYFISLFFSAAIMWTL-RKTTDDE 588

Query: 565 GLIDRLRSTFSKNYNS 580
            L+  L   + +N N+
Sbjct: 589 KLLAILEKRYQENKNN 604


>gi|86132804|ref|ZP_01051396.1| 60 KD inner membrane protein [Dokdonia donghaensis MED134]
 gi|85816758|gb|EAQ37944.1| 60 KD inner membrane protein [Dokdonia donghaensis MED134]
          Length = 628

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 112/610 (18%), Positives = 225/610 (36%), Gaps = 64/610 (10%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEE-------MNNERKNIQTVKQPNQVDNSYAAVLI 58
           N  + + L   I+  W  ++  P  EE          + ++  T      V  +  AV  
Sbjct: 8   NSLIGMLLMGGILL-WIIYFNKPTAEELEAEKAAQTEQVESQDTDVASLPVAQTAPAVAS 66

Query: 59  DDRAQ-----------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
           D  A                  +        + N  L   ++ KG    ++ +  +    
Sbjct: 67  DSIANIALQNRLGAFAYSGSLPSAKEGATTTISNDVLEIKVSNKGGYITEVKMLQHST-- 124

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161
             +S  V L+   N+        +   + ++    N+  ++   S         + +  K
Sbjct: 125 -YDSIPVYLIKDGNS------TFNVSFSTSDNRNLNTKDLFFEPSLSKNGNNDVLSMKLK 177

Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
            +NN   E    L E          +     ++  S   R+               E   
Sbjct: 178 VSNNEYLEYRYELKEGDYMMDFGMRSQGLSTRLNTSNPMRMQWDFKGMRHARSQSYENRY 237

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL--- 278
             L  K   ++              E   W+     +++S+ I                 
Sbjct: 238 TRLTYKYEEDKTDKLSPAGDDDEIEEDLVWMNYRQHFFSSMLISETPFKEARLTSKDLYK 297

Query: 279 ----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
                D    +  ++ ++ +       +     ++ G  ++  +  Y++ L      M +
Sbjct: 298 EADDRDEETIFTKQYGSDVLLEAKNGELDYAMQMYYGPTDYTILKSYDQGLDEA---MPL 354

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            WG F F+ K + +    F +     GIAI++ T+ +KL   P+  KQY S A MK ++P
Sbjct: 355 GWGIFGFLNKYLVIPFFGFLSGFLPAGIAIIVMTIVIKLFLSPVQYKQYTSQAKMKILKP 414

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           +I  + EK+K +  +  Q+  + LY     +P AGC P LLQIPVF+A++     + ++R
Sbjct: 415 EIAAISEKYKDNAMKK-QQETMALYSKAGASPAAGCLPALLQIPVFYALFTFFPSAFDLR 473

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPP 511
               + W  DL++ D   I  L   +PFY     HV ++PI+ ++++F  M++   +   
Sbjct: 474 GKS-FLWADDLSSYD--EIAKLPFEIPFYG---DHVSLFPILAAVTIFFSMRLTTGNQQM 527

Query: 512 ADKGQAMI----------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
               Q  +          + + P++ +   + + +GL +Y+  SN+++I    VI  +  
Sbjct: 528 QQPTQEGMPDMSKMMKYMMYFSPLLMLVFFNQYASGLSLYYFISNLLTIGIILVIKNVII 587

Query: 562 AEIGLIDRLR 571
            E  +  ++ 
Sbjct: 588 DEEKIRAKIE 597


>gi|282879875|ref|ZP_06288602.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Prevotella timonensis CRIS 5C-B1]
 gi|281306269|gb|EFA98302.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Prevotella timonensis CRIS 5C-B1]
          Length = 626

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 100/603 (16%), Positives = 231/603 (38%), Gaps = 46/603 (7%)

Query: 10  AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS--- 66
            + L  +++  +  +      E+    +++       ++ + +       + A   +   
Sbjct: 3   GLVLMGLLLIGFSWWSQPSAEEQAKKMQQDSIAAVTQHKAELAKQQAHAKEIADLKAKQK 62

Query: 67  -------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
                         +  V LKN  L  S+N KG       ++ +      ++P V L   
Sbjct: 63  ADTTALFHAALEGQAQEVVLKNEHLELSVNTKGGTVSKAIIKNFKDR--EDNPDVVLFDD 120

Query: 114 SNTKNAYFAELD--YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
              K  +        ++T +    P++ T   L           + + ++   + L   +
Sbjct: 121 KVQKLNFIMSTKEANIATQDLYFSPSAQTDSTLTLTADAGQGKSLVIQYRLGADYLLHMS 180

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
           + ++        +T   N     +   + +    + + AT T+   +G            
Sbjct: 181 MKVNGMNGLFAPNTKFMNVDWTDKCRQQEKGFTFENRYATLTYHKVKGG----------T 230

Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
           +K S+  +       +   W+   ++++++V I   + S  +    +         K   
Sbjct: 231 KKLSEASEEIDKKIDDKIDWVAFKNQFFSAVMIAKHDFSEEALMTSVPQEKGSGYLKAYQ 290

Query: 292 NEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWFYFIAKPM 346
            ++     P     +    + G  +F  ++  EK+    +    + L+  GW  F     
Sbjct: 291 AKMQTFFDPTGQKASEFEFYFGPNDFRLLNRIEKESTFNKDLELQRLVYLGWPLFRIINR 350

Query: 347 FMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
           +  +  F  L      G+ ++L T+ +KL+ +P+ KK Y+S+A M+ ++PK++    ++ 
Sbjct: 351 WFTIYVFDWLSKWFPMGVVLILITLLLKLITYPMVKKSYMSSAKMRVLKPKLEAATAQYN 410

Query: 405 QSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
           +   Q+  Q+AM+  Y  + ++PL+GC P+L+Q+P++ A++  +  ++++R    + WI 
Sbjct: 411 KPEDQMQKQQAMMAEYSKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGES-FLWIN 469

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
           DL+  DP   +     L         +   I  ++ S     Q +         Q  ++ 
Sbjct: 470 DLSTYDPIIQWNKNIWLIGDHLSLTCILFCIANVLYSWMTMRQQRDQMVGQQAEQMKMMQ 529

Query: 522 W----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           W    MPV+F F  + + AGL  Y+  S   S      + +    +  L+  L + + +N
Sbjct: 530 WMMYLMPVMFFFMFNDYSAGLNFYYFVSLFFSAAIMWTL-RKTTNDAKLLQILEARYEEN 588

Query: 578 YNS 580
             +
Sbjct: 589 KAN 591


>gi|315224395|ref|ZP_07866228.1| inner membrane protein OxaA [Capnocytophaga ochracea F0287]
 gi|314945671|gb|EFS97687.1| inner membrane protein OxaA [Capnocytophaga ochracea F0287]
          Length = 621

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 115/609 (18%), Positives = 233/609 (38%), Gaps = 55/609 (9%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------TVKQPNQVDN 51
           ME         +   L  I++  W      P  EE+   +   +      T  Q +    
Sbjct: 1   MEEKKFDLKSIIGFTLIFILLM-WFMNNNKPSEEELAKRKAQQEQQANQATNTQKDTHTA 59

Query: 52  SYAAVLIDDRAQ----------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95
           ++  +  D  A                   +      L+N  +  +I+ +G Q  ++ L+
Sbjct: 60  TFQGIPTDSVALEKYKANLGAFAYSATLPSAKDGVTVLENKDIKLTISNRGGQPKEVLLK 119

Query: 96  GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155
            +      +S  V L+   N             T ++ +L    T+      K+L+    
Sbjct: 120 EFKT---YDSLPVYLIKDWNATFNLSFTTAQNQTLSSKDLYFEPTLSENNGNKVLSMKLK 176

Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
                         +   + +  +     +   N+   +    + +  R +         
Sbjct: 177 TSENAYLEYVYTLPKEGYMLDVAVRSQGLSGVVNTSKPMNIDWKLQARRMEKSVT----- 231

Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275
             E        +   ++     +  +     E  +W+      + SV I     +     
Sbjct: 232 -YENRYTQATVQYDGDRISRLSQGGNDEQKEEKVNWVAYKQHLFTSVLISDNPFAKGDFV 290

Query: 276 KYLSDGHARYQAKFSANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            +          K++ N +T LP       ++ +   + G  ++  +  Y     +    
Sbjct: 291 SHNIAMSEGKDVKYTKNFLTSLPIQAKSGELSESLHFYFGPSDYNVLKQYNDKYELTEL- 349

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           + + WG F ++ K +F+ +  F     + G+ I+L T+ V+LL  P+  K YVS A MK 
Sbjct: 350 IPLGWGIFGWLNKWLFIPLYNFLTDYFSVGLVIILMTIIVRLLLSPIVYKSYVSQAKMKV 409

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           ++P+I+E+ +K+    P   Q+  + LY    +NPL+GC P LLQ+PVF A++       
Sbjct: 410 LRPEIEEINKKY--EEPMKRQQETMALYNKAGVNPLSGCIPALLQLPVFLALFNFFPTEF 467

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP- 510
            +R    + W  DL++ D   IF L   +PFY     HV ++P++ S+++FI   M+   
Sbjct: 468 GLRQKS-FLWAHDLSSYD--AIFELPFSIPFYGS---HVSLFPLLASVAIFIYSMMTMAQ 521

Query: 511 PADKGQAMI--LNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            A   Q  +  + ++    PV+ +F  +++ +GL +Y+  SN+++I     I      E 
Sbjct: 522 TAQPQQPGMPNMKFLIYLSPVMMLFFFNNYASGLSLYYFISNLLTIGIMLAIKYWIIDEQ 581

Query: 565 GLIDRLRST 573
            +  +++  
Sbjct: 582 KIHAQIQEN 590


>gi|256819005|ref|YP_003140284.1| putative inner membrane protein translocase component YidC
           [Capnocytophaga ochracea DSM 7271]
 gi|256580588|gb|ACU91723.1| 60 kDa inner membrane insertion protein [Capnocytophaga ochracea
           DSM 7271]
          Length = 621

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 118/609 (19%), Positives = 233/609 (38%), Gaps = 55/609 (9%)

Query: 1   MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------TVKQPNQVDN 51
           ME         +   L  I++  W      P  EE+   +   +      T  Q +    
Sbjct: 1   MEEKKFDLKSIIGFTLIFILLM-WFMNNNKPSEEELAKRKAQQEQQANQATNTQKDTHTA 59

Query: 52  SYAAVLIDDRAQ----------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95
           ++  +  D  A                   +      L+N  +  +I+ +G Q  ++ L+
Sbjct: 60  TFQGIPTDSVALEKYKASLGAFAYSATLPSAKDGVTVLENKDIKLTISNRGGQPKEVLLK 119

Query: 96  GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155
            +      +S  V L+   N      A  +   T    +  +S  ++   +         
Sbjct: 120 EFKT---YDSLPVYLIKDWN------ATFNLSFTTAQNQTLSSKDLYFEPTLNENNGNKV 170

Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
           + +  K + N   E   +L +      V   +      +  S    I             
Sbjct: 171 LSMKLKTSENAYLEYVYTLPKEGYMLDVAVRSQGLSGVVNTSKPMNIDWKLQARRMEKSV 230

Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275
             E        +   ++     +  +     E  +W+      + SV I     +     
Sbjct: 231 TYENRYTQATVQYDGDRISRLSQGGNDEQKEEKVNWVAYKQHLFTSVLISDNPFAKGDFV 290

Query: 276 KYLSDGHARYQAKFSANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
            +          K++ N +T LP       ++ +   + G  ++  +  Y     +    
Sbjct: 291 SHNIAMSEGKDVKYTKNFLTSLPIQAKSGELSESLHFYFGPSDYNVLKQYNDKYELTEL- 349

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           + + WG F ++ K +F+ +  F     + G+ I+L T+ V+LL  P+  K YVS A MK 
Sbjct: 350 IPLGWGIFGWLNKWLFIPLYNFLTNYFSVGLVIILMTIIVRLLLSPIVYKSYVSQAKMKV 409

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           ++P+I+E+ +K+    P   Q+  + LY    +NPL+GC P LLQ+PVF A++       
Sbjct: 410 LRPEIEEINKKY--EEPMKRQQETMALYNKAGVNPLSGCIPALLQLPVFLALFNFFPTEF 467

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP- 510
            +R    + W  DL++ D   IF L   +PFY     HV ++P++ S+++FI   M+   
Sbjct: 468 GLRQKS-FLWAHDLSSYD--AIFELPFSIPFYGS---HVSLFPLLASIAIFIYSMMTMAQ 521

Query: 511 PADKGQAMI--LNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            A   Q  +  + ++    PV+ +F  +++ +GL +Y+  SN+++I     I      E 
Sbjct: 522 TAQPQQPGMPNMKFLIYLSPVMMLFFFNNYASGLSLYYFISNLLTIGIMLAIKYWIIDEQ 581

Query: 565 GLIDRLRST 573
            +  +++  
Sbjct: 582 KIHAQIQEN 590


>gi|218960871|ref|YP_001740646.1| Preprotein translocase subunit YidC (modular protein) [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729528|emb|CAO80439.1| Preprotein translocase subunit YidC (modular protein) [Candidatus
           Cloacamonas acidaminovorans]
          Length = 543

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 107/538 (19%), Positives = 207/538 (38%), Gaps = 52/538 (9%)

Query: 41  QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
           QTV +P + D      ++D           ++L N  +  + N +G     + L  +   
Sbjct: 44  QTVTEPVKPDTIIITPMLDTLLAKGKTPEIIKLSNQLMTVTFNSRGGSIQQVELHNF--- 100

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
           +  +S  V L+  +++     A++  +       L +    + +        +  +    
Sbjct: 101 IMHDSTKVKLIPENSS----LADVKLIHPTAETPLKDVIFQYRISP-----DSLGVTFFL 151

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
            +  N    ++ +LD  Y       V N  +           +        +        
Sbjct: 152 GDETNSQISKSFALDNQYGISFSINVENYQVINGIEVDFSCGIADTETVTKSKQQDYRFM 211

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
                   + +   + ++K   S    S +W+ +  KY+    +  +      +      
Sbjct: 212 YYADN--EIFKTTLAKMKKKQPSGNLNSFNWMALRGKYF--TLVLKENEPALVRSFRTEL 267

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
                   F  +     P +S + +  ++AG  ++  +  Y K +            W  
Sbjct: 268 NPQTGNPAFVIDSKQSNPKQSWSQSFIIYAGPTDYQILQKYGKQMDNIPE---RGASWLR 324

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           ++A     ++ + +  + N+G+ I++  V +KLL  PL + Q V +   + +QP I+E+R
Sbjct: 325 WLANIFEWILKFLHRYIKNYGVVILIFAVIIKLLLHPLTQHQMVHSMRQQKMQPYIEEIR 384

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           +K+     +  ++ + +LYK +  +  AGC P+L+QIP+   +Y V+  SL+MR+A F  
Sbjct: 385 KKYANDVVK-QREELTKLYKENKTSMTAGCLPLLIQIPILIPLYNVLRYSLDMRNASFCL 443

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQA-- 517
           W+KDL+  DP                     I PIIM   M +Q  M  P   D  Q   
Sbjct: 444 WLKDLSEPDPYM-------------------ILPIIMGGFMLLQSLMMRPKNVDTSQMTE 484

Query: 518 ---------MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
                     I+ W MP+  V      PAGL++YW+  NV+SI+ Q  + K    +  
Sbjct: 485 QQKMQQSQMKIMTWGMPIFMVIIFRGMPAGLVLYWTAFNVLSILHQYFLTKHLKKKEN 542


>gi|260592831|ref|ZP_05858289.1| inner membrane protein OxaA [Prevotella veroralis F0319]
 gi|260535201|gb|EEX17818.1| inner membrane protein OxaA [Prevotella veroralis F0319]
          Length = 641

 Score =  202 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 101/617 (16%), Positives = 229/617 (37%), Gaps = 52/617 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER---------------KNIQTVKQ 45
           M+          L  ++++ +  +    + +    ++               + +Q  K 
Sbjct: 1   MD--KKTITGFILIALVLFGFAWWQQPSKEQLEQQQKEARLDSIAAAKKAQSQQLQAAKL 58

Query: 46  PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------L 99
             Q   +         +     +  + LKN  +  +++ KG       ++ Y        
Sbjct: 59  AQQKAQAATDTTALFHSALNGKAQDITLKNGKVELTLSTKGGVVRKAVIKNYVGHDIDVK 118

Query: 100 DVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157
           D S +   +TL S ++    +   A+   + T +    P++ T   +           + 
Sbjct: 119 DGSKDQKDLTLFSGNDQNLNFMLSAKTSNIETKDLYFTPSNVTDSTVTLTADAGQGKTLT 178

Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           L +    + L   ++  +        +    +   + R   + R    + + AT T+   
Sbjct: 179 LNYTLGKDYLLHMSLQAEGMSGMFAPNYNQMDINWEDRCRQQERGFMFENRYATLTYKKH 238

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
           +G              Y            E   W+   ++++++V I     +  +Q K 
Sbjct: 239 DGST-----------DYLSETSEKEETTEEPMDWVAFKNQFFSAVMIAKDNFATGAQLKS 287

Query: 278 LSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEM 332
                     K  A  +     P     +    + G  +F  +   EK+    +    + 
Sbjct: 288 TPLEKGTKYLKQYAANMKAGFDPTGKKASEFEFYFGPNDFRLLQSVEKESRFGKDLDMQR 347

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           L+  GW  F     +  +  F  L  V   G+ ++L T+ +KL+ +P+ KK Y+S+A M+
Sbjct: 348 LVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITYPMVKKSYMSSAKMR 407

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
            ++PK+DE  ++F +   Q+ ++  +   Y  + ++PL+GC P+L+Q+P++ A++  +  
Sbjct: 408 VLKPKLDEATKQFNKPEDQMQKQQAMMQKYAEYGVSPLSGCLPMLIQMPIWIAMFNFVPN 467

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMKM 507
           ++++R    + W+KDL+  DP   +     L         +      ++ S     Q K 
Sbjct: 468 AIQLRGES-FLWMKDLSTYDPILSWNSDLWLIGDHLSLTCILFCGANLLYSWFTMQQQKD 526

Query: 508 SPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                   Q  ++ +    MP+ F F  +++ +GL  Y+  S   S      + +    +
Sbjct: 527 QMVGQQADQMKMMQYMMFAMPLFFFFMFNNYSSGLNFYYFVSLFFSAAIMWTL-RKTTND 585

Query: 564 IGLIDRLRSTFSKNYNS 580
             L+  L +   +  N+
Sbjct: 586 EKLLAILEAHRKEAKNN 602


>gi|91228357|ref|ZP_01262285.1| putative inner membrane protein translocase component YidC [Vibrio
           alginolyticus 12G01]
 gi|91188117|gb|EAS74421.1| putative inner membrane protein translocase component YidC [Vibrio
           alginolyticus 12G01]
          Length = 227

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 94/237 (39%), Positives = 146/237 (61%), Gaps = 21/237 (8%)

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           P  ++++D+GW +FIAKP+ ML+S+  + VGN+G+AI+  T  V+   +PL K QY S A
Sbjct: 6   PNLDLVVDYGWLWFIAKPLHMLLSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMA 65

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
            M+ +QPK+  +RE+      Q + + M++LYK   +NPL GC P++LQ+P+F A+Y  +
Sbjct: 66  KMRMLQPKLQAMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL 124

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S+E+RH+PF+GWI DL+A DP                     I P++M  SMF+  KM
Sbjct: 125 MESVELRHSPFFGWIHDLSAQDPYY-------------------ILPLLMGASMFLIQKM 165

Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           SP    D  Q  I+ +MPV+F F    FP+GL++YW  SN+++++QQ +I K    +
Sbjct: 166 SPTTVTDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYKGLEKK 222


>gi|282879438|ref|ZP_06288176.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Prevotella buccalis ATCC 35310]
 gi|281298436|gb|EFA90867.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Prevotella buccalis ATCC 35310]
          Length = 631

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 99/612 (16%), Positives = 230/612 (37%), Gaps = 48/612 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPR----------------IEEMNNERKNIQTVK 44
           M+   N    + L  +++  +  +                      ++    +KN +   
Sbjct: 1   MD--KNTITGLVLMGLLLIGFSWWSQPSSEQKAEMMRQDSIAAVMKQKAETNKKNAELKH 58

Query: 45  QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
                    A             +  + L+N  L  ++N KG       ++G+       
Sbjct: 59  LAELKAKQEADTTALFHKALQGEAQDIVLQNEKLQLTLNTKGGTVTKAVIKGFEDR--EG 116

Query: 105 SPIVTLLSPSNTKNAYFAELD--YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
           +  VTLL     +  +        ++T +    P++ T   +           + L +K 
Sbjct: 117 NKDVTLLDEKVHQLNFTLSTKDTNIATQDLFFQPSAQTDSTVTLTANAGQGKSMVLTYKL 176

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
             N L   ++ ++        DT   N   + +   + +    + + +T T+  ++G   
Sbjct: 177 GPNYLLHMSMQVNGMNGLFAPDTKVMNVNWKDKCRQQEKGFTFENRYSTLTYHEEDGG-- 234

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                     K S+  +       +   W+   ++++++V I   + +  +    +    
Sbjct: 235 --------TDKLSETSEKVDEQIDKKIDWVAFKNQFFSAVMIAKHDFNTGALLTSIPQQK 286

Query: 283 ARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWG 337
                K    ++     P     +    + G  +F  ++  E+     +    + L+  G
Sbjct: 287 GSGFLKEYEAKLKTFFDPTGQTPSEFEFYFGPNDFRLLNRVEQQSTFNKDLELQRLVYLG 346

Query: 338 WFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           W  F     +  +  F  L      G+ ++L T+ +K++ FP+ KK Y+S+A M+ ++PK
Sbjct: 347 WPLFRIINRWFTIYVFDWLSKWFPMGVVLILITLLLKVITFPMVKKSYMSSAKMRVLKPK 406

Query: 396 IDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           ++    ++ +   Q+  Q+AM+  Y  + ++PL+GC P+L+Q+P++ A++  +  ++++R
Sbjct: 407 LEAATAQYNKPEDQMQKQQAMMAEYSKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLR 466

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKMSPPPA 512
               + WI DL+  DP   +     L         +   +  ++ S     Q +      
Sbjct: 467 GES-FLWINDLSTYDPVIEWNRNIWLIGDHLSLTCILFCVANVLYSWMTMRQQRDQMVGQ 525

Query: 513 DKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
              Q  ++ W    MPV+F F  + + +GL  Y+  S   S      + +    +  L+ 
Sbjct: 526 QAEQMKMMQWMMYLMPVMFFFMFNDYSSGLNFYYFVSLFFSAAIMWTL-RKTTNDEKLLK 584

Query: 569 RLRSTFSKNYNS 580
            L + + +N  +
Sbjct: 585 ILEARYEENKAN 596


>gi|332827257|gb|EGK00027.1| hypothetical protein HMPREF9455_03616 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 646

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 106/634 (16%), Positives = 235/634 (37%), Gaps = 73/634 (11%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIE----------------------------- 31
           M+   N  +   L   ++  +         E                             
Sbjct: 1   MD--KNTIIGFVLIAAVIIGFTLLSRPSAEELAKQKEQYRRDSIEYAQTKEREKELNNLK 58

Query: 32  ----EMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGA 87
               E+ NE         P Q  +S  AV+   +  +      + L+N  L    + KG 
Sbjct: 59  DTAAEVKNENPVDDFFAAPVQEADSVLAVMDSVQMGSQQAEQLITLENSKLKVVFSTKGG 118

Query: 88  QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147
           +     L+ Y      +   + L +         AE     T    ++ ++N +      
Sbjct: 119 KMVSAQLKEYSR---YDGDSLYLFNND-------AEFSLQLTNKQNKVLHTNNLIFTPIK 168

Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHY-LFKIVDTVTNNSIDQIRFSPRGRIMRHK 206
                +  ++  +    ++ F   ++ D++   + +        +D+ +          K
Sbjct: 169 AEGDNSLIMRFSYAANQHVDFIYKLAEDDYMLKYDVNLVGLQPMLDRNKSDVIELYWAQK 228

Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266
            +    +   ++ +  +       + K    +KS      E   W+   ++++A + I  
Sbjct: 229 MRRQEKSVKNEQRYSHIYYKYIGGDVKELSSDKSEQLEVKEPAKWIAFKNQFFAPILIAD 288

Query: 267 KETSF------HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320
           ++                S+     +A   A     +   +I+     + G   F  +  
Sbjct: 289 EKIETALLDSKVLVTDENSEYLKTVEATIYAPATVDMNAGTISAGFTYYLGPMSFTLLKG 348

Query: 321 YE-------KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373
           Y+       K L + +   L    + +     +  + +       + GI I+L T+ VKL
Sbjct: 349 YDSHIDDVNKQLDLDKLVPLGWTLFRWVNQYFVIPIFNLLRGTGMSMGIVILLLTIIVKL 408

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWP 432
           +  PL  K ++S+A M+ ++P+++EL  K+ +       Q+A + LY    +NP++GC P
Sbjct: 409 VISPLTFKSFMSSAKMRVLRPQVEELAAKYPKQEQAMEKQQATMALYNKAGVNPMSGCIP 468

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +LLQ+P+  A++     ++E+R    + W  DL+  D   I      +P       H+ +
Sbjct: 469 LLLQMPILIALFSFFPNAIELRGQS-FLWATDLSTYD--AIIEWKNHIPLIGT---HISL 522

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAM------ILNWMPVVFVFALSSFPAGLIIYWSWSN 546
           + I+M+++  I  K +    + GQ        ++  MP++F+F L+ +P+GL  Y+  S 
Sbjct: 523 FCILMTVTNIIYTKFNMEMTNTGQQQMPGMKWMMYLMPLIFLFMLNDYPSGLTYYYFLSL 582

Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           +++I+   +  +    E  ++ +L +  +K    
Sbjct: 583 LVTILLT-IGFRYIIDEDKVLAKLEANKAKPKKK 615


>gi|212550525|ref|YP_002308842.1| inner membrane protein translocase component YidC [Candidatus
           Azobacteroides pseudotrichonymphae genomovar. CFP2]
 gi|254772747|sp|B6YQF9|OXAA_AZOPC RecName: Full=Inner membrane protein oxaA
 gi|212548763|dbj|BAG83431.1| preprotein translocase YidC subunit [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 612

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 115/595 (19%), Positives = 239/595 (40%), Gaps = 39/595 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  +   L   +++ +        I+E   +   +       +  N  + +   D
Sbjct: 1   MD--KNTIIGFILIFWVLFGFAYLNHNRPIQEQLEKNPPMSANSVKKEFSNPISEIQSSD 58

Query: 61  -----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
                 A        V ++N  +   ++ KG +   + L+ Y      N P+       +
Sbjct: 59  IYGNFAASTKGTETFVTIQNALMEIKLSTKGGRIYSVRLKKY--TNYKNEPLYLFEGDES 116

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
             N  F         NN  L + +  + ++S   L      +L       I F  T+  D
Sbjct: 117 AFNIIFISS------NNKVLNSEDFYFEIVSNSELETIL--RLNAGKNRYIDFVYTLHPD 168

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
           ++ +   + +    +               K +        +E +  +       + +  
Sbjct: 169 DYMVDWKLVSHNIQTELSHSMHTLNIQWMQKIRQQEKGRKFEERYARLTYKFLTDDIEQL 228

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
              K  + N      W+G  D++++SVFI        ++       +  Y  ++S +   
Sbjct: 229 RETKDDVRNVPNKLKWIGYKDQFFSSVFIVHSNFE-SAKLDSKYLTYGAYIKEYSTSTSI 287

Query: 296 ILPGKSIT-TTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWFYFIAKPMFMLMS 351
                +I       + G  ++  +  Y+K     +    E L+  GW  F A    +++ 
Sbjct: 288 PYNIANIEPIKFNFYFGPNDYSLLKSYDKTKLKEQNLELEKLVPLGWSLFRAINKCLIIP 347

Query: 352 YFYNLVG----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            F  L      N G+AI++ T+ +K+  FPL  K ++S+A M+ ++P+++ +  K+    
Sbjct: 348 IFNWLTNGENVNLGLAILILTLIIKIALFPLTYKSFISSAKMRVLKPQVENINIKYSGQE 407

Query: 408 PQV-LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
             +  Q+  ++LY+   +NP+ GC+PILLQ+P   A++     ++ +RH   + W  DL+
Sbjct: 408 KALIRQQKTMELYRQVGVNPMTGCFPILLQMPFLIALFMFFPSAIGLRHQS-FLWANDLS 466

Query: 467 AADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSPPPAD-------KGQAM 518
             D    ++    +PF       H+ ++ ++MSL+  +  + +             G  +
Sbjct: 467 TYDTLIQWSTD--IPFIPRFLGNHISLFCLLMSLATILNTRYNTMYQQNIGQEQFPGMKL 524

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
            + +MPVV  F L+S+PAGL  Y+  S +I+I+Q  +I +    E+ L+ +L + 
Sbjct: 525 TMYFMPVVMFFFLNSYPAGLNYYYLISTLITIMQT-IIFRGLVNELNLLAKLEAN 578


>gi|288800073|ref|ZP_06405532.1| inner membrane protein OxaA [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288333321|gb|EFC71800.1| inner membrane protein OxaA [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 632

 Score =  199 bits (506), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 105/614 (17%), Positives = 241/614 (39%), Gaps = 50/614 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  +  +L   ++  +  +      E     R++     +  Q  N  +  L+ +
Sbjct: 1   MD--KNNIIGFSLIAAVLIGFSVWNQPSSEERAEIARQDSIANVKKAQEKNLSSKTLLAN 58

Query: 61  RAQALS----------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104
            A   S                 +  V LK+  L  ++N KGA   ++ ++G+     + 
Sbjct: 59  TATDSSLTNADTTSVLFNALKGTAQDVTLKSEKLTLTLNSKGAVVREVLIKGFKDR--NG 116

Query: 105 SPIVTLLSPSNTKNAYFAELD--YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
           +P VTL + ++    Y        + T      P++ T   +     L  T  + + ++ 
Sbjct: 117 NPNVTLFNSNDQNLRYILSTKEENIDTKELYFQPSNVTDSTVTFTAQLQGTKKLVINYQL 176

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
            +N L   +I           +T + + + Q +   + +    + + +T T+   +G   
Sbjct: 177 KHNYLLHTSIQAQGMNAIFAPNTNSMDIVWQDKCRQQEKGFTFENRYSTLTYHKADGGTD 236

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
            L + S                  +   W+   ++++++V I   +   ++    +    
Sbjct: 237 YLSESSEK----------VDEKIEDKLDWVAFKNQFFSAVMIAKDDFQSNTLLTSVPQEK 286

Query: 283 ARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF- 339
                K    ++     P     T    + G  +F  + + E +++    ++ +    + 
Sbjct: 287 GSGYLKDYEAKLKTFFDPTGKKPTEFEFYYGPNDFRLLQNIEDNVSFIGKDLQMQRLVYL 346

Query: 340 ------YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
                          +  +  ++  N GI ++L T+ +K L +PL KK Y+S+A M+ ++
Sbjct: 347 GWPLFRIINRWFTIYVFDFLTSMNMNMGIVLILITLLLKFLTYPLVKKSYMSSAKMRVLK 406

Query: 394 PKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           P+++E  +    +  Q+  Q+AM+  Y  + ++PL+GC P+L+Q+P++ A++  +  +++
Sbjct: 407 PRLEEATKHLNGADNQMQKQQAMMSEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQ 466

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKMSPP 510
           +R    + WI DL+  DP   +     L         +      ++ S     Q K    
Sbjct: 467 LRGES-FLWISDLSTYDPILEWHNNYWLIGDHLSLTCILFCAANLLYSWMTMKQQKDQMI 525

Query: 511 PADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
                Q  ++ +M    P++F F  + + AGL  Y+  S   S +    I++    +  L
Sbjct: 526 GQQADQMKMMQYMMFVMPLMFFFMFNDYSAGLNFYYFMSLFFSALIMW-ILRKTTDDEKL 584

Query: 567 IDRLRSTFSKNYNS 580
           +  L   + +N ++
Sbjct: 585 LSILDKKYKENKDN 598


>gi|90581132|ref|ZP_01236931.1| putative inner membrane protein translocase component YidC [Vibrio
           angustum S14]
 gi|90437653|gb|EAS62845.1| putative inner membrane protein translocase component YidC [Vibrio
           angustum S14]
          Length = 230

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 90/227 (39%), Positives = 141/227 (62%), Gaps = 21/227 (9%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
            D+GW  FIA P+  L+++ + +VGN+G+AI++ T+ V+ L +PL K QY S A M+ +Q
Sbjct: 11  PDYGWSSFIASPLHELLAFIHGIVGNWGVAIIILTLIVRGLMYPLTKAQYTSMAKMRMLQ 70

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           PKI  +RE+      Q   + M++LYK   +NPL GC P+L+Q+P+F A+Y V+++S E+
Sbjct: 71  PKIQAMRERCGD-DRQRQSQEMMELYKKEKVNPLGGCLPLLIQMPIFIALYTVLNLSTEL 129

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512
           R+APF+GWI++L+A DP                     + PI+M +SMF   K SP    
Sbjct: 130 RNAPFFGWIQNLSAQDPYY-------------------VLPILMGISMFFIQKNSPSTVT 170

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           D  Q  I+ +MPV+F      FPAGL++YW  SN+++++QQ +I + 
Sbjct: 171 DPMQQKIMTFMPVIFTVFFLYFPAGLVLYWLTSNIVTLIQQTIIFRK 217


>gi|257457349|ref|ZP_05622520.1| inner membrane protein OxaA [Treponema vincentii ATCC 35580]
 gi|257445271|gb|EEV20343.1| inner membrane protein OxaA [Treponema vincentii ATCC 35580]
          Length = 521

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 116/524 (22%), Positives = 223/524 (42%), Gaps = 26/524 (4%)

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
           +   + +     V +K      ++  +G       L  ++         V ++     +N
Sbjct: 3   ETPDETVIGEQAVTVKTDIAEITLTNRGGDIISYKLLEHNNS--KGDSYVEMVKNLTDRN 60

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF---ERTISLD 175
             F+     + A  +    +     +    ++     I +  ++ +   F   +R   L 
Sbjct: 61  RAFSIALGGAQAPALNQFFNVKEETVNGKHVVGFFKTISIKNQDGSVSSFTLAKRYTFLP 120

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV--EQK 233
           + Y+F++  T++ ++  Q                    +  +          + +  ++K
Sbjct: 121 DDYMFELAVTISGDADMQGLNFDNAGYTLRTMPQIGPDWNAKADRYEYRNFFAYINGKKK 180

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
            S ++ +      +S  W GIS KY++ + IPS        +          Q       
Sbjct: 181 DSALKANQTKVITDSVPWAGISGKYFSLIVIPSVPAQ-QILYSAAQPNADTVQDSQLFFS 239

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYE----KDLAIPRF---EMLIDWGWFYFIAKPM 346
             ++ G  +T    ++ G      +  Y      +          + +  G +  +   +
Sbjct: 240 RPVITGNRVTDVYRIYLGPCSENILSTYNIPSKNNYNYDNLRIDTVAVSSGIWRPLEVLL 299

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
             L+ +FY L+ N+G++I+L T+ +K++FFPL KK   ST  M+ +QPKI EL+ K+K  
Sbjct: 300 KWLLQFFYKLIPNWGVSIILVTILIKVIFFPLTKKSSESTQQMQKMQPKIQELQAKYKG- 358

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465
            PQ L + M +LYK    NPL+GC P+L+Q+P+ FA+Y++ +   E R A F   WI DL
Sbjct: 359 KPQKLNEEMAKLYKEAGYNPLSGCLPLLIQLPILFAMYRLFNNYFEFRGAMFIPHWIPDL 418

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA----MILN 521
           +  D  +I      +PF   G+  + I PI+  +S  +  K++  P    Q      I+ 
Sbjct: 419 SVGD--SILQFPSPIPFL--GWTDLRILPIVYVISQMVFGKITQTPTSDQQQNNTMKIMM 474

Query: 522 W-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           + MP+ F F   + P+GL++YW+ +N + +VQQ +I  M   + 
Sbjct: 475 YGMPLFFFFMFYNAPSGLLLYWTCTNFLMLVQQMIIKAMMKKKE 518


>gi|325270361|ref|ZP_08136966.1| inner membrane protein OxaA [Prevotella multiformis DSM 16608]
 gi|324987305|gb|EGC19283.1| inner membrane protein OxaA [Prevotella multiformis DSM 16608]
          Length = 642

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 105/618 (16%), Positives = 228/618 (36%), Gaps = 54/618 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N      L  ++++ +  +   P  E++  +R                A +    
Sbjct: 1   MD--KNTIAGFVLIALVLFGFAWWQ-QPSAEQVAQQRAEFVKDSVAAARKAQNAKLAAAK 57

Query: 61  R----------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------ 98
           +                +        + LKN  +  ++N KG       +R Y       
Sbjct: 58  QAQQKAAAAADTTALFHSALNGKGQDITLKNSKVELTLNTKGGVVSKAVIRNYVGHDIAV 117

Query: 99  LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156
            D S +   VTL S ++    +    +   + T + + +P++ T   +    +  P   +
Sbjct: 118 KDGSKDRKDVTLFSGNDQSLNFMLAGKNTNIETKDLVFIPSNVTDTTVTLTAVAGPGRTL 177

Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216
            L +    + L   ++  +        D    +   Q R   + R    + + AT T+  
Sbjct: 178 TLNYVLGRDYLLHASLQAEGMSGLFAPDCNQMDVSWQERCRQQERGFTFENRYATLTYRK 237

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
             G              Y            ++  W+   ++++++V I     +  ++ K
Sbjct: 238 HGGST-----------DYLSETAEKEETTEDAMDWVAFKNQFFSAVMIARDNFAAGAKLK 286

Query: 277 YLSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FE 331
                   +  K     +     P     +    + G  +F  +   EK+    +    +
Sbjct: 287 STPLDKESHYLKHYEASMKTGFDPTGRRPSEFEFYFGPNDFRLLQSVEKESRFGKDLDMQ 346

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            L+  GW  F     +  +  F  L  V   G+ ++L T+ +KL+ +P+ KK Y+S+A M
Sbjct: 347 RLVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITYPMVKKSYMSSAKM 406

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           + ++PK+DE   +F +   Q+ ++  +   Y  + ++PL+GC P+L+Q+P++ A++  + 
Sbjct: 407 RVLKPKLDEATRQFNKPEDQMQKQQAMMQKYAEYGVSPLSGCLPMLIQMPIWIAMFNFVP 466

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMK 506
            ++++R    + W+ DL+  DP   +     L         +      ++ S     Q K
Sbjct: 467 NAIQLRGQS-FLWMDDLSTYDPIISWGHNLWLVGDHLSLTCILFCGANLLYSWFTMQQQK 525

Query: 507 MSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
                    Q  ++ W    MP+ F F  + + +GL  Y+  S   S      + +    
Sbjct: 526 DQMVGQQADQMKMMQWMMFAMPLFFFFMFNDYSSGLNFYYFVSLFFSAAIMWTL-RKTTD 584

Query: 563 EIGLIDRLRSTFSKNYNS 580
           +  L+  L +   +  N+
Sbjct: 585 DEKLLRILEAKRKEKKNN 602


>gi|325857446|ref|ZP_08172501.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola
           CRIS 18C-A]
 gi|325483156|gb|EGC86136.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola
           CRIS 18C-A]
          Length = 642

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 105/618 (16%), Positives = 227/618 (36%), Gaps = 54/618 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N      L  ++++ +  +   P  E++  +R                A +    
Sbjct: 1   MD--KNTITGFVLIALVLFGFAWWQ-QPSAEQVAQQRAEFVKDSVAAARKAQNAKIAAAK 57

Query: 61  R----------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------ 98
           +                +        + LKN  +  ++N KG       ++ Y       
Sbjct: 58  QAQQKAAVAADTTALFHSALNGKGQDITLKNSKVELTLNTKGGVVSKAVIKNYVGHDIAV 117

Query: 99  LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156
            D S +   VTL S ++    +    +   + T + +  P++ T   +    +  P   +
Sbjct: 118 KDGSKDRKDVTLFSGNDQSLNFMLAGKNTNIETKDLVFTPSNVTDTTVTLTAVAGPGKTL 177

Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216
            L +    + L   ++  +        D    +   Q R   + R    + + AT T+  
Sbjct: 178 TLNYVLGKDYLLHASLQAEGMSGLFAPDCNQMDVSWQERCRQQERGFTFENRYATLTYKK 237

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
             G              Y            ++  W+   ++++++V I     S  ++ K
Sbjct: 238 HGGST-----------DYLSETAEKEETTEDAMDWVAFKNQFFSAVMIARDNFSAGAKLK 286

Query: 277 YLSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FE 331
                   +  K     +     P     +    + G  +F  +   EK+    +    +
Sbjct: 287 STPLDKESHYLKHYEASMKTGFDPTGRRPSEFEFYFGPNDFRLLQAVEKESRFGKDLDMQ 346

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            L+  GW  F     +  +  F  L  V   G+ ++L T+ +KL+ +P+ KK Y+S+A M
Sbjct: 347 RLVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITYPMVKKSYMSSAKM 406

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           + ++PK+DE   +F +   Q+ ++  +   Y  + ++PL+GC P+L+Q+P++ A++  + 
Sbjct: 407 RVLKPKLDEATRQFNKPEDQMQKQQAMMQKYAEYGVSPLSGCLPMLIQMPIWIAMFNFVP 466

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMK 506
            ++++R    + W+ DL+  DP   +     L         +      ++ S     Q K
Sbjct: 467 NAIQLRGQS-FLWMDDLSTYDPIISWGHNLWLVGDHLSLTCILFCGANLLYSWFTMQQQK 525

Query: 507 MSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
                    Q  ++ W    MP+ F F  + + +GL  Y+  S   S      + +    
Sbjct: 526 DQMVGQQADQMKMMQWMMFAMPLFFFFMFNDYSSGLNFYYFVSLFFSAAIMWTL-RKTTN 584

Query: 563 EIGLIDRLRSTFSKNYNS 580
           +  L+  L +   +  N+
Sbjct: 585 DEKLLQILEAKRKEKKNN 602


>gi|327314137|ref|YP_004329574.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola
           F0289]
 gi|326944441|gb|AEA20326.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola
           F0289]
          Length = 642

 Score =  198 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 104/618 (16%), Positives = 226/618 (36%), Gaps = 54/618 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N      L  ++++ +  +   P  E++  +R                A +    
Sbjct: 1   MD--KNTITGFVLIALVLFGFAWWQ-QPSAEQVAQQRAEFVKDSVAAARKAQNAKLAAAK 57

Query: 61  R----------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------ 98
           +                +        + LKN  +  ++N KG       ++ Y       
Sbjct: 58  QAQQKAAVAADTTALFHSALNGKGQDITLKNSKVELTLNTKGGVVSKAVIKNYVGHDMAV 117

Query: 99  LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156
            D S +   VTL S ++    +    +   + T + +  P++ T   +    +  P   +
Sbjct: 118 KDGSKDRKDVTLFSGNDQSLNFMLAGKNTNIETKDLVFTPSNVTDTTVTLTAVAGPGKTL 177

Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216
            L +    + L   ++  +        D    +   Q R   + R    + + AT T+  
Sbjct: 178 TLNYVLGKDYLLHASLQAEGMSGLFAPDCNQMDVSWQERCRQQERGFTFENRYATLTYKK 237

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
             G              Y            ++  W+   ++++++V I     +  ++ K
Sbjct: 238 HGGST-----------DYLSETAEKEETTEDAMDWVAFKNQFFSAVMIARDNFAAGAKLK 286

Query: 277 YLSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FE 331
                   +  K     +     P     +    + G  +F  +   EK+    +    +
Sbjct: 287 STPLDKESHYLKHYEASMKTGFDPTGRHPSEFEFYFGPNDFRLLQAVEKESRFGKDLDMQ 346

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            L+  GW  F     +  +  F  L  V   G+ ++L T+ +KL+ +P+ KK Y+S+A M
Sbjct: 347 RLVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITYPMVKKSYMSSAKM 406

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           + ++PK+DE   +F +   Q+ ++  +   Y  + ++PL+GC P+L+Q+P++ A++  + 
Sbjct: 407 RVLKPKLDEATRQFNKPEDQMQKQQAMMQKYAEYGVSPLSGCLPMLIQMPIWIAMFNFVP 466

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMK 506
            ++++R    + W+ DL+  DP   +     L         +      ++ S     Q K
Sbjct: 467 NAIQLRGQS-FLWMDDLSTYDPIISWGHNLWLVGDHLSLTCILFCGANLLYSWFTMQQQK 525

Query: 507 MSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
                    Q  ++ W    MP+ F F  + + +GL  Y+  S   S      + +    
Sbjct: 526 DQMVGQQADQMKMMQWMMFAMPLFFFFMFNDYSSGLNFYYFVSLFFSAAIMWTL-RKTTN 584

Query: 563 EIGLIDRLRSTFSKNYNS 580
           +  L+  L     +  N+
Sbjct: 585 DEKLLQILEEKRKEKKNN 602


>gi|119953231|ref|YP_945440.1| putative inner membrane protein translocase component YidC
           [Borrelia turicatae 91E135]
 gi|254772754|sp|A1QZM8|OXAA_BORT9 RecName: Full=Inner membrane protein oxaA
 gi|119862002|gb|AAX17770.1| 60 kDa inner membrane protein YidC [Borrelia turicatae 91E135]
          Length = 545

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 119/571 (20%), Positives = 229/571 (40%), Gaps = 51/571 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M ++     AI LS+  +  +      F+       M  E             D  + ++
Sbjct: 1   MSQSKRILRAIYLSLFFIGIFMLVDDVFFSRKSPSVMEREI----GFNLDRDFDVEHHSI 56

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
             +D     + S  + ++      + +  G     L L+ +   ++       ++  +  
Sbjct: 57  DENDTLSLSANSKEIGVETGIYYATFSTFGGNLVSLKLKDH---LNLERNPTEMVKVNMD 113

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
           +   F       T +         +++       T     K  + +      +R     +
Sbjct: 114 REGLFYITFDNLTKS---------LFSYDKINDYTHEFKTKFEYNDKYYEYIKRYTFSSK 164

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
                 ++   NN      F                    + G +      S      + 
Sbjct: 165 DEYLIKLEIFLNNVDANDNFDIDFYKFVLSSDIEN---LSERGKLQYNNYLSQSIYYDTK 221

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
           +             W+G S KY+  +     + + + +FK  +     +      +    
Sbjct: 222 LRYGKDGLSVIKPKWVGSSTKYFEVLV---SKENMNVEFKQENKVLKTFVLNKIGD---- 274

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDL------AIPRFEMLIDWGWFYFIAKPMFMLM 350
               S + T +++AG ++   +  + ++       +   F M ++    YFI  PM ++M
Sbjct: 275 ---TSFSDTFYIYAGPRDNGYLDIFNENNLNSFGLSNVEFGMSVEKSLLYFIQVPMQLIM 331

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
             FY+++ N+G++I+  T+ V++L FPL  K + +TA +  +QPK+ E++ KFK   P+ 
Sbjct: 332 QIFYDVIPNWGLSIIFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKN-DPKR 390

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469
           L + M +LY+   +NPL GC PILLQ+PVFFA+Y +++    +R A F  GWI DL+  D
Sbjct: 391 LNEEMGKLYREEGVNPLGGCLPILLQLPVFFALYGLVNNFFLLRGASFIPGWIDDLSIGD 450

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525
               F       + +  +  + I P IM ++  +   +S   + K    Q   L + MP+
Sbjct: 451 SIYYFG------YKVFVWTDIRILPFIMMITQLLSTIISSNVSFKNLGSQQKFLYFGMPI 504

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F F L   P+GL+IYW  +N+ +I+QQ  I
Sbjct: 505 MFFFILYDMPSGLLIYWITTNIFTILQQYYI 535


>gi|187918308|ref|YP_001883871.1| putative inner membrane protein translocase component YidC
           [Borrelia hermsii DAH]
 gi|254772751|sp|B2S0E5|OXAA_BORHD RecName: Full=Inner membrane protein oxaA
 gi|119861156|gb|AAX16951.1| 60 kDa inner membrane protein YidC [Borrelia hermsii DAH]
          Length = 545

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 122/567 (21%), Positives = 229/567 (40%), Gaps = 43/567 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M ++     AI LS+  +  +          +  +              D   +++  D 
Sbjct: 1   MSQSKRILRAIYLSLFFIGIFMIIDDIFFSHKSPSVMDKEIGFNLDKDFDIDNSSIDEDY 60

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                + S  ++++      + +        L L+ +       + +V +     +   +
Sbjct: 61  ALNLSANSKDIDVETGIYYATFSTFRGDLISLKLKDHLNLEKEPTEMVKVNMDRES--LF 118

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
           +  LD ++            +++       T        +        +R    ++    
Sbjct: 119 YVTLDNLTRD----------LFSYDRVDDYTHDFKTNFEYNGKFYEYIKRYTFSNKGEYL 168

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
             ++   NN                           + G +      S      + +   
Sbjct: 169 IKLEIFLNNIDANDNSDIDSYKFVLSSDIEK---LSERGKLQYNNYLSQAVYFDTKLRYG 225

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
                  S  W+G   KY+  +     + + + +FK  S     +              K
Sbjct: 226 KDGLSVISPKWVGSGTKYFEVLV---SKENMNVEFKQESKILKAFILNKVG-------NK 275

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDL------AIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
           +I+ T +++AG K+   +  + K+       +   F M ++    YFI  PM ++M  FY
Sbjct: 276 NISDTFYIYAGPKDNGYLDLFNKEDLNSFGLSNVEFGMSVEKSLLYFIQVPMQLIMQIFY 335

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           N++ N+G++IM  T+ V++L FPL  K + +TA +  +QPK+ E++ KFK   P+ L + 
Sbjct: 336 NVIPNWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKN-DPKRLNEE 394

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNI 473
           M +LY+   +NPL GC+PILLQ+PVFFA+Y +++    +R A F  GWI DL+  D    
Sbjct: 395 MGKLYREEGVNPLGGCFPILLQLPVFFALYGLVNNFFLLRGASFIPGWIDDLSIGDSIYY 454

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW-MPVVFVF 529
           F       + +  +  + I P IM ++  I   +S   + K    Q  IL + MP++F F
Sbjct: 455 FG------YKVFMWTDIRILPFIMMVTQLISTIISSNVSFKSLGSQQKILYFGMPIMFFF 508

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556
            L   P+GL+IYW  +N+ +I+QQ  I
Sbjct: 509 ILYDMPSGLLIYWITTNIFTILQQYYI 535


>gi|325103807|ref|YP_004273461.1| membrane protein insertase, YidC/Oxa1 family [Pedobacter saltans
           DSM 12145]
 gi|324972655|gb|ADY51639.1| membrane protein insertase, YidC/Oxa1 family [Pedobacter saltans
           DSM 12145]
          Length = 590

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 101/582 (17%), Positives = 222/582 (38%), Gaps = 35/582 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ---VDNSYAAVL 57
           M+   N F  + L +II+     F + P  EE+  E+    ++ +      V N +  V 
Sbjct: 1   MD--KNTFTGLFLILIILVG-STFLLKPNEEEIKREQFVQDSLAKVKSGVPVTNEHKNVT 57

Query: 58  IDDRAQALSMSPRV---ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114
           + D     +    V    L+N  +  +++  G Q     ++    + +     V L + S
Sbjct: 58  LKDSVFVDNSKQEVISSVLENDKIKLNLSNLGGQIISSVVK---TETTYRGEPVVLFNKS 114

Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK-NANNILFERTIS 173
           +    + +    V+T         +    L         + I  ++     +   +  IS
Sbjct: 115 DFGLEFVSNGKNVNTNQLYFTRVDSVPNKLTYRYADADGSYIDFIYSLPEGSNKVDFNIS 174

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
           L  +                   +    + +            +  +  V    S  +  
Sbjct: 175 LKGYSQKI-----------PGSTTDLNLVWQTNLLQQEKDLKSERNYSTVYYKTSAGDVD 223

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
           Y    +++  +  E   W+     ++++  I     S        +  +   +   +   
Sbjct: 224 YLSETETAEKDVQEKIEWVSFKQHFFSAAIISKDGFSKGHTKVETTSSNDFVKRYSTKLS 283

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
           +   P    +     + G  +F  +       ++ +   +      +     +  + ++F
Sbjct: 284 LPYKPSDVNSYDLTYYFGTNKFSELKDQ--GFSLEKQVKMGWGPLKWINRYLVLPIFNFF 341

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
            +   ++G+ I+L TV +K   FP   K Y+S A M+ ++P++DE++ K  +    +LQ+
Sbjct: 342 NSFALSYGLIILLLTVILKGALFPFTYKSYLSMAKMRVLKPEMDEIKAKVGEDNQALLQQ 401

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
             ++LYK   +NPL GC P+L Q+P   A +       E+RH   + W+ DL+  D    
Sbjct: 402 EYLKLYKQAGVNPLGGCLPMLFQMPFILAFFYFFPNLFELRHES-FLWMTDLSTYDDIIK 460

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-KGQAM-ILNWMPVVFVFAL 531
           F    +L +      H+ +  ++M+ S  I    +   ++ +GQ   I    P++F   L
Sbjct: 461 FPTIPLLGWD-----HISLMCLLMTTSTLIYTYYNNQTSNVQGQMKYIGYITPLIFFGVL 515

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           +S+P+GL  Y+  +N+++  QQ  I +    +  +  +++  
Sbjct: 516 NSYPSGLNYYYFCANILTFAQQFFI-RRFVDDDKIHAQIQEN 556


>gi|288802342|ref|ZP_06407782.1| inner membrane protein OxaA [Prevotella melaninogenica D18]
 gi|288335309|gb|EFC73744.1| inner membrane protein OxaA [Prevotella melaninogenica D18]
          Length = 643

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 101/617 (16%), Positives = 224/617 (36%), Gaps = 52/617 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+          L  +I++ +  +      +      + ++      +   +        
Sbjct: 1   MD--KRTITGFVLIALILFGFAWWQQPSAEQVAQQRAEFVKDSIAAAKKTQTAKLAAEKQ 58

Query: 61  R---------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY------HL 99
                           +     +  + LKN  +  +++ KG       ++ Y        
Sbjct: 59  AQQKAAQATDTTALFYSALSGKAQDITLKNSKVELTLSTKGGVVKKAVIKNYIGHNIAVK 118

Query: 100 DVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157
           D S +   VTL S  +    +   A+   + T + I  P++ T   +    +      + 
Sbjct: 119 DGSQDQKNVTLFSGDDQSLNFMLAAKNSNIETKDLIFTPSNVTDSTVTFTAVAGKGKTLT 178

Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           L +    + L   ++  +        +    +   Q R   + R    + + AT T+   
Sbjct: 179 LSYTLGKDYLLNMSLQAEGMGGLFAPNYNQLDINWQDRCRQQERGFTFENRYATLTYKKH 238

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
           +G              Y            E   W+   ++++++V I     +  ++ K 
Sbjct: 239 DGGT-----------NYLSETSEKEETTEEPMDWVAFKNQFFSAVMIAKDNFATGAKLKS 287

Query: 278 LSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEM 332
                + +  K     +     P     +    + G  +F  +   E +    +    E 
Sbjct: 288 TPLEKSSHYLKHYEANMKAGFDPTGKRPSEFEFYFGPNDFRLLQSVETESKFAKELDMER 347

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           L+  GW  F     +  +  F  L  V   G+ ++L T+ +KL+ FP+ KK Y+S+A M+
Sbjct: 348 LVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITFPMVKKSYMSSAKMR 407

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
            ++PK+DE  ++F +   Q+ ++  +   Y  + ++PL+GC P+L+Q+P++ A++  +  
Sbjct: 408 VLKPKLDEATKQFNKPEDQMQKQQAMMQKYSEYGVSPLSGCLPMLIQMPIWIAMFNFVPN 467

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMKM 507
           ++++R    + W+ DL+  DP   +     L         +      ++ +     Q K 
Sbjct: 468 AIQLRGQS-FLWMHDLSTFDPIFSWNHDVWLVGDHISLTCILFCGANLLYTWFTMQQQKD 526

Query: 508 SPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                   Q  ++ W    MP+ F F  + + +GL  Y+  S   S      + +    E
Sbjct: 527 QMVGQQADQMKMMQWMMFGMPLFFFFMFNDYSSGLNFYYFISLFFSAAIMWAL-RKTTNE 585

Query: 564 IGLIDRLRSTFSKNYNS 580
             L+  L +   +  N+
Sbjct: 586 EKLLAILEARREERKNN 602


>gi|282858704|ref|ZP_06267858.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Prevotella bivia JCVIHMP010]
 gi|282588508|gb|EFB93659.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain
           protein [Prevotella bivia JCVIHMP010]
          Length = 641

 Score =  197 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 102/609 (16%), Positives = 222/609 (36%), Gaps = 50/609 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK-NIQTVKQPNQVDNSYAAVLID 59
           M+   N      L  ++++ +  +    + +     ++    ++    +V N   A L  
Sbjct: 1   MD--KNTITGFVLMALVLFGFAWWQQPSKEQLAQQRKQFVADSIAAAKKVQNEKMASLKA 58

Query: 60  DRAQALS--------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------L 99
           ++A+  +               +  + LKN  +  ++N KG       +  Y        
Sbjct: 59  EQAKQAAIADTTTLFYTALNGQAQDIVLKNDKVALTLNTKGGVVRKAIINNYVGHNIAVK 118

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159
           D S +   VTL    +        L++   A    +   +  +   +       + + L 
Sbjct: 119 DGSKDQKYVTLFDGKD------QSLNFALAAKQSNIETKDLYFTPSN----QTDSTVTLT 168

Query: 160 FKNANNILFERTISLDEHYLFKIV-DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218
                      T +L + YL  +         +     +        K +     F  + 
Sbjct: 169 ANAGQGKALILTYTLGKDYLLHLSVQAQGMEGLFNPTNNQLEVEWADKVRQQERGFSFEN 228

Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
            +  +   K+     Y +          E+  W+   ++++++V I     S  ++ K +
Sbjct: 229 RYATLTYKKTEGSTDYLNESSEKEQITEEATDWVAFKNQFFSAVMISKDNFSTGAKLKSV 288

Query: 279 SDGHARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEML 333
                    K     +     P     +    F G  +F  +   E      +    + L
Sbjct: 289 PQDKNSGYLKQYEANLKTNFDPSGKKPSEFEFFFGPNDFRLLQAIESQSTFGKDLEMQRL 348

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--FPLAKKQYVSTANMKN 391
           +  GW  F     +  +  F  L   F + I+L  + + L    +P+ KK Y+S+A M+ 
Sbjct: 349 VYLGWPLFRIINRWFTIYVFDWLSKLFPMGIVLILITLLLKALTYPMVKKSYMSSAKMRV 408

Query: 392 IQPKIDELREKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           ++PK+DE  +++ +   Q   Q+AM+Q+Y  + ++PL+GC P+L+Q+P++ A++  +  +
Sbjct: 409 LKPKLDEATKQYNKPEDQMKKQQAMMQMYSEYGVSPLSGCLPMLIQMPIWIAMFNFVPNA 468

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKMS 508
           +++R    + W+KDL+  DP   +     +         +      ++ S     Q K  
Sbjct: 469 IQLRGES-FLWMKDLSTFDPIFEWNHSLWMIGDHISLTCILFCAANLLYSWFTMQQQKDQ 527

Query: 509 PPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
              +   Q  ++ +    MP+ F F  + + +GL  Y+  S   S      + +    E 
Sbjct: 528 MVGSQGDQMKMMQYMMLGMPLFFFFVFNDYSSGLNFYYFVSLFFSAAIMWGL-RKTTNEE 586

Query: 565 GLIDRLRST 573
            L+  L   
Sbjct: 587 KLLAYLEER 595


>gi|149197354|ref|ZP_01874405.1| hypothetical protein LNTAR_00195 [Lentisphaera araneosa HTCC2155]
 gi|149139372|gb|EDM27774.1| hypothetical protein LNTAR_00195 [Lentisphaera araneosa HTCC2155]
          Length = 614

 Score =  196 bits (498), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 111/606 (18%), Positives = 239/606 (39%), Gaps = 68/606 (11%)

Query: 8   FVAIALSVIIVY------AWQNFY-VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
            + + LS+ ++         Q F+ + P+      E  +           ++     I +
Sbjct: 9   LIILGLSLYLILNTENDKINQKFFGIEPQAAAPVEENTDTALSSDVVSPTSTTNEKTIAE 68

Query: 61  RAQALSMSPR-----------VELKNPSLIGSINLK---GAQFDDLNLRGYHLDVSSNSP 106
             Q ++ +             + L   S+  +  L    G    D  L  Y    + +  
Sbjct: 69  PKQEIAKTEIKEELPKELNTELPLHTLSVGENFTLNIRPGQGLKDAQLNEYFTTSAKDQN 128

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
           +      + + +       +      ++  +++ +    +      +  ++  ++   + 
Sbjct: 129 VKIGDKNTPSFSLSGVAEKWELIDLRVKEKSNDKLITEAAYTFEGQSFAVQSTWELEEDY 188

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
            F     L       +  +    +   I+    G       Q   N   +          
Sbjct: 189 HFALNHKLINTSDKTLNVSGLYLNCGYIQPIQMGEHGFFTQQAIGNDQAIDTILKKERKI 248

Query: 227 KSLVEQKYSDIEKSSIS--------------------NFHESNSWLGISDKYW------- 259
           ++ ++       +  +                     + ++S  W+ + ++Y+       
Sbjct: 249 ETHIKTSIDGDIQDKVEEAQDQGRVLKDPFMVYSPDPDDNDSYDWIAVKNQYFAFIADTT 308

Query: 260 -ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL---PGKSITTTNFLFAGAKEF 315
            +   + +K     S  K       +Y   F+  +I+     PG S      ++AG +E 
Sbjct: 309 DSFATVRTKTKEIISPTKNEDGSQDKYDLLFAEGQISDFDLAPGASKEIVLDIYAGPQEI 368

Query: 316 PTIHHYEKDL-AIPRFEMLIDW--GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
             + +   D   I +  M ++    W  F+++ +   + +F   V +FG+AI+L T+ VK
Sbjct: 369 HVLENLGNDKKGIMQLNMFMNMKVSWLGFLSEMILKALFFFNGFVNSFGLAIILLTISVK 428

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432
           LLF+ L  K   S   M  + P+I E+RE+ K +P QV+ + ++ LY+   +NP  GC P
Sbjct: 429 LLFWRLTNKSNKSMKKMAVLGPRIKEIREENKDNP-QVMNQKVMALYREEGVNPAGGCLP 487

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +LLQ+P+F A++  +  ++E+RH   + WI DL+  D        G +P      + +  
Sbjct: 488 MLLQMPIFIALFNALRSAIELRHV-EFLWITDLSQPDT------LGFIPG-----VPIRP 535

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
             II +L M +Q KM+P  AD+ Q  ++ +MP++ +F     PAGL +YW + ++++++Q
Sbjct: 536 LVIIWALLMLVQQKMTPSSADETQKKVMMFMPIMMLFFCYGMPAGLTLYWCFQSLMTLIQ 595

Query: 553 QAVIMK 558
             +  +
Sbjct: 596 YKLNNR 601


>gi|302346738|ref|YP_003815036.1| membrane protein insertase, YidC/Oxa1 family [Prevotella
           melaninogenica ATCC 25845]
 gi|302150409|gb|ADK96670.1| membrane protein insertase, YidC/Oxa1 family [Prevotella
           melaninogenica ATCC 25845]
          Length = 643

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 106/618 (17%), Positives = 231/618 (37%), Gaps = 54/618 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+          L  +I++ +  +   P  E++  +R         +      A +  + 
Sbjct: 1   MD--KRTITGFVLIALILFGFAWWQ-QPSAEQVAQQRAEFVKDSIASAKKAQTAKLAAEK 57

Query: 61  R----------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY------H 98
           +                A     +  + LKN  +  +++ KG       ++ Y       
Sbjct: 58  QAQQKAAQATDTTALFYAALNGKAQDIILKNSKVELTLSTKGGVVKKAVIKNYIGHNIAV 117

Query: 99  LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156
            D S +   VTL S  +    +   A+   + T + I  P++ T   +    +      +
Sbjct: 118 KDGSQDQKNVTLFSGDDQSLNFMLAAKNSNIETKDLIFTPSNVTDSTVTLTAVAGEGKTL 177

Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216
            L +    + L   ++  +        +    +   Q R   + R    + + AT T+  
Sbjct: 178 TLNYTLGKDYLLNMSLQAEGMGGLFAPNYNQIDINWQERCKQQERGFTFENRYATLTYKK 237

Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276
            +G              Y            +S  W+   ++++++V I     +  ++ K
Sbjct: 238 HDGGT-----------DYLSETSEKEETTEDSMDWVAFKNQFFSAVMIAKDNFATGAKLK 286

Query: 277 YLSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FE 331
                 + +  K     +     P     +    + G  +F  +   E +    +    E
Sbjct: 287 STPLEKSSHYLKHYEANMKAGFDPTGKRPSEFEFYFGPNDFRLLQSVETESKFAKELDME 346

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            L+  GW  F     +  +  F  L  V   G+ ++L T+ +KL+ FP+ KK Y+S+A M
Sbjct: 347 RLVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITFPMVKKSYMSSAKM 406

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           + ++PK+DE  ++F +   Q+ ++  +   Y  + ++PL+GC P+L+Q+P++ A++  + 
Sbjct: 407 RVLKPKLDEATKQFNKPEDQMQKQQAMMQKYSEYGVSPLSGCLPMLIQMPIWIAMFNFVP 466

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMK 506
            ++++R    + W+ DL+  DP   ++    L         +      ++ +     Q K
Sbjct: 467 NAIQLRGQS-FLWMHDLSTFDPIFSWSHDVWLVGDHISLTCILFCGANLLYTWFTMQQQK 525

Query: 507 MSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
                    Q  ++ W    MP+ F F  + + +GL  Y+  S   S      + +    
Sbjct: 526 DQMVGQQADQMKMMQWMMFGMPLFFFFMFNDYSSGLNFYYFISLFFSAAIMWAL-RKTTN 584

Query: 563 EIGLIDRLRSTFSKNYNS 580
           E  L+  L +   +  N+
Sbjct: 585 EEKLLAILEARREERKNN 602


>gi|221218111|ref|ZP_03589577.1| inner membrane protein OxaA [Borrelia burgdorferi 72a]
 gi|225548690|ref|ZP_03769737.1| inner membrane protein OxaA [Borrelia burgdorferi 94a]
 gi|221192059|gb|EEE18280.1| inner membrane protein OxaA [Borrelia burgdorferi 72a]
 gi|225370720|gb|EEH00156.1| inner membrane protein OxaA [Borrelia burgdorferi 94a]
          Length = 544

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 116/571 (20%), Positives = 230/571 (40%), Gaps = 47/571 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59
           M ++      + LS+ ++  +           ++++  + +         D++  + +  
Sbjct: 1   MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKPSDKEVQFDLNKSFDDNEMSSVKS 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
           +    +  S  + ++    + + +        L L+ +   ++       L++       
Sbjct: 61  NSFNLIDKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F         +            L                 N     + +  +  +   
Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167

Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           + +   VT N ++      F     I   + +  ++   +Q             + KY  
Sbjct: 168 YLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
                      +  W+G S KY+  +     + +   +FK        +          +
Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350
              K+I+   F++AG K+   +  ++K            F M ++  ++Y I  PM M+M
Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDNFFGMSVEKSFWYLIQVPMQMVM 333

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
             FY+++ N+G++I+  T+ V++L FPL  K + +TA +  +QPK+ EL+ KF +  P+ 
Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKK 392

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469
           L + M +LYK   +NPL GC P++LQ+P+FFA+Y +++    +R A F  GWI DL+  D
Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525
               F        Y   +  + I P IM  +      +S     K    Q   L + MP+
Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F F L + P+GL+IYW  +N+ +I+QQ  I
Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539


>gi|313157184|gb|EFR56614.1| membrane protein insertase, YidC/Oxa1 family [Alistipes sp. HGB5]
          Length = 656

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 105/642 (16%), Positives = 230/642 (35%), Gaps = 71/642 (11%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+      + I +  ++   +  +    + E+   E    Q  +      +  A    D 
Sbjct: 1   MD--KKTILGIVVVAVLFLGF-AYVNTKQQEKYQQEMAAWQAYQDSVAAASRPAVPAADS 57

Query: 61  -----------------------------------------RAQALSMSPRVELKNPSLI 79
                                                     A   +      ++N  + 
Sbjct: 58  VAGGAAESAVAASGETTAPEAEADLAQTVRQRRIAAMGEYLTAAQEAEPEEFTVENEVMT 117

Query: 80  GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139
              + +G Q   + L+ Y            +         +       +  NN+++   +
Sbjct: 118 VRFSTRGGQITGVTLKDYTKYAPRGQRDQLIELMDPASARFDMSFYVKNGLNNVKVNTMD 177

Query: 140 TVWNLISGKILTPTTPIKLVFKNANNILFERTISL------DEHYLFKIVDTVTNNSIDQ 193
            V+     +       + +    A N   E    +      +  YL      + N +   
Sbjct: 178 YVFRAEPVETAGDARRVTMRLAVAENAWLEYEYLIYNKQAPERDYLVDFNVRLVNMAPQM 237

Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGF--IAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251
              +  G    +        F  +  +  +A         ++    + +   +   + +W
Sbjct: 238 ANQTSIGIDWSNVSYQNEKGFQNENMYTTLAYRFPGESSIEELGMSDGAKSKSVSTAVNW 297

Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311
           +    ++++SVFI  +  S  +     +   +     FS         +        + G
Sbjct: 298 VAFKQQFFSSVFIAPQNVSSANMAFDTAAPGSELLKSFSVQMAVPYSAQVEGYDFAFYFG 357

Query: 312 AKEFPTIHHYEKDLA----IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367
             ++  +     +      + R   L    + +     +  +  +  N +G+FGI I++ 
Sbjct: 358 PNKYAILKKVTDNNGADLHMERLIPLGWGIFGWVNRWCVIPVFDFLRNYIGSFGIIILIL 417

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINP 426
            + VKL+  PL  K YVS A M+ I+P++DEL +K+ +       Q+A ++LYK   INP
Sbjct: 418 VILVKLVISPLTYKSYVSMAKMRLIKPQVDELNKKYPKKEDAMKKQQATMELYKKAGINP 477

Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486
           + GC P+L+Q+P+  A+++    S+E+R  P + W  DL++ D  +I  L   +PFY   
Sbjct: 478 MGGCIPMLIQLPILIAMFRFFPASIELREQP-FLWADDLSSYD--SIVNLPFSIPFYG-- 532

Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI--LNWMPVVF-----VFALSSFPAGLI 539
             HV ++ ++M++S+F     +       Q  +  + +M V       +   +S+ +GL 
Sbjct: 533 -DHVSLFALLMAVSLFGYSYFNYQQTASSQPQMAGMKFMMVYMMPIMMLLWFNSYSSGLC 591

Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            Y+  SN+ +I Q  VI +    +  +   +++  ++    +
Sbjct: 592 YYYLLSNLFTIGQTLVI-RRIVDDEKIHAVMQANAARKSKGK 632


>gi|255532481|ref|YP_003092853.1| 60 kDa inner membrane insertion protein [Pedobacter heparinus DSM
           2366]
 gi|255345465|gb|ACU04791.1| 60 kDa inner membrane insertion protein [Pedobacter heparinus DSM
           2366]
          Length = 600

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 107/592 (18%), Positives = 212/592 (35%), Gaps = 46/592 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51
           M+   N F  + L +I++     F+     E      +      +   V N         
Sbjct: 1   MD--RNTFTGLFLIMIVLAGSFYFFKPSEAEIKKERERIAADSAKKAGVVNTPTPVAAVA 58

Query: 52  -----SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106
                  AA+     A          L+N +L   ++ KG +   + ++G       N  
Sbjct: 59  ATPVVDSAALKGPFGANISGTVQTSVLENENLKLVLSNKGGKILSVEVKGEKT---YNGK 115

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
            V L      K      +     + N     +                 + +    + N 
Sbjct: 116 PVILFDGDQNKFGLNLNISGKIVSTNDLYFTATP-----------GNGIVTMRANYSANQ 164

Query: 167 LFERTISLDEHYL---FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223
             E    L        F I     N  I     +        + + +             
Sbjct: 165 YIEYIYDLKPKSSQVGFNINLNGLNQVIQNNTIALNWEATLLEQEKSGKKEREHSAPYYK 224

Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283
             DK+      +  EK  ++       W+    +++++  IP            +S    
Sbjct: 225 YADKNPDHLSIAKDEKEELAA--GKIEWISFKQQFFSAALIPKNGFEKGDLEVKVSTEPG 282

Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343
           + +   +   +      + +     + G  +F T+     +  + +   +  W   Y   
Sbjct: 283 KIKWYGANMVLPFNQLAAQSYAMVFYFGTNKFDTLKAQGYE--LEKQVDMGYWPLKYINR 340

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  +  +  +   N+G+ I+L T+ +K+   PL  K Y+S A M+ ++P++D ++ K 
Sbjct: 341 FIVLPVFKFLESFNWNYGVIILLLTIALKVAMSPLTYKSYLSMAKMRILKPEMDVIKAKV 400

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
               P +LQ+  ++LYK   +NPL GC P+LLQ+P   A +       E+R    + W+K
Sbjct: 401 GDDNPTLLQQEYLKLYKQVGVNPLGGCLPMLLQLPFVMAFFFFFPNLFELRGE-TFLWMK 459

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILN 521
           DL+  D    F     +PF      H+ +  ++M++S  I    +   +     M  I  
Sbjct: 460 DLSTYDDFIKFG--FTIPFIG---DHLSLMCVLMTISTLIYTYFNNQISGATGQMKYIGY 514

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
            MP++F+  L+S+P+GL  Y+  +N+++  QQ +I K    +  +   L+  
Sbjct: 515 IMPIIFLGVLNSYPSGLNYYYFLANMLTFAQQFLI-KSMVDDEKIHRTLQEN 565


>gi|225549578|ref|ZP_03770544.1| inner membrane protein OxaA [Borrelia burgdorferi 118a]
 gi|225369855|gb|EEG99302.1| inner membrane protein OxaA [Borrelia burgdorferi 118a]
          Length = 544

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 116/571 (20%), Positives = 230/571 (40%), Gaps = 47/571 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59
           M ++      + LS+ ++  +           ++++  + +         D++  + +  
Sbjct: 1   MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKPSDKEVQFDLNKSFDDNEMSSVKS 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
           +    +  S  + ++    + + +        L L+ +   ++       L++       
Sbjct: 61  NSFNLIDKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F         +            L                 N     + +  +  +   
Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167

Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           + +   VT N ++      F     I   + +  ++   +Q             + KY  
Sbjct: 168 YLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
                      +  W+G S KY+  +     + +   +FK        +          +
Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350
              K+I+   F++AG K+   +  ++K            F M ++  ++Y I  PM M+M
Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDNFFGMSVEKSFWYLIQVPMQMVM 333

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
             FY+++ N+G++I+  T+ V++L FPL  K + +TA +  +QPK+ EL+ KF +  P+ 
Sbjct: 334 QVFYDVMPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKK 392

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469
           L + M +LYK   +NPL GC P++LQ+P+FFA+Y +++    +R A F  GWI DL+  D
Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525
               F        Y   +  + I P IM  +      +S     K    Q   L + MP+
Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F F L + P+GL+IYW  +N+ +I+QQ  I
Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539


>gi|218249421|ref|YP_002374953.1| inner membrane protein OxaA [Borrelia burgdorferi ZS7]
 gi|226321751|ref|ZP_03797277.1| inner membrane protein OxaA [Borrelia burgdorferi Bol26]
 gi|254772749|sp|B7J208|OXAA_BORBZ RecName: Full=Inner membrane protein oxaA
 gi|218164609|gb|ACK74670.1| inner membrane protein OxaA [Borrelia burgdorferi ZS7]
 gi|226232940|gb|EEH31693.1| inner membrane protein OxaA [Borrelia burgdorferi Bol26]
          Length = 544

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 116/571 (20%), Positives = 230/571 (40%), Gaps = 47/571 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M ++      + LS+ ++  +           ++++  + +     N+  +      +  
Sbjct: 1   MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEISSVKS 60

Query: 61  RAQA-LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
            +   ++ S  + ++    + + +        L L+ +   ++       L++       
Sbjct: 61  NSFNLINKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F         +            L                 N     + +  +  +   
Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167

Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           + +   VT N ++      F     I   + +  ++   +Q             + KY  
Sbjct: 168 YLMKFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
                      +  W+G S KY+  +     + +   +FK        +          +
Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350
              K+I+   F++AG K+   +  ++K            F M ++  ++Y I  PM M+M
Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVM 333

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
             FY+++ N+G++I+  T+ V++L FPL  K + +TA +  +QPK+ EL+ KF +  P+ 
Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKK 392

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469
           L + M +LYK   +NPL GC P++LQ+P+FFA+Y +++    +R A F  GWI DL+  D
Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525
               F        Y   +  + I P IM  +      +S     K    Q   L + MP+
Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F F L + P+GL+IYW  +N+ +I+QQ  I
Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539


>gi|256425563|ref|YP_003126216.1| hypothetical protein Cpin_6611 [Chitinophaga pinensis DSM 2588]
 gi|256040471|gb|ACU64015.1| 60 kDa inner membrane insertion protein [Chitinophaga pinensis DSM
           2588]
          Length = 617

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 110/604 (18%), Positives = 223/604 (36%), Gaps = 40/604 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE---RKNIQTVKQPNQVDNSYAAVL 57
           M+   N  +  AL  ++   +  F+   +      E   + +I  V +P  VD +     
Sbjct: 1   MD--RNSVIGFALLGVLFVGY-IFFNQKQQTAAKREKDRQDSIANVNKPKPVDTAAYVNG 57

Query: 58  IDDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
               +  L+ +                L+N  L  + + +G Q   + L+ +        
Sbjct: 58  GVADSSKLASAYGTFAGAANGTIQTAVLENKVLKVTFSSQGGQPTLVQLKQFKDFEGKP- 116

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
               L+  +++ N    ++   +           T  ++      + +   +L   N   
Sbjct: 117 ----LMLANSSFNRISLQVPANNNTQLNTSDLYFTGGSVQQLADGSQSISYRLPTSNPEQ 172

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVL 224
            L        + Y                       +    +          +     V 
Sbjct: 173 YLEYVYTLKQDGYAVDFDIHAIGLENVLPSNQKTLSLQWDAENDKQEKDMQNERQNNQVH 232

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
                 +  Y  +++++   +     W+ +  +++ + FI  K+  F+          + 
Sbjct: 233 YRDVNGKHDYFTLQRTTHEKWDNQLQWVSVKQQFFNTTFIARKDAHFNGAEVNAKVPESA 292

Query: 285 YQAK--FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD-LAIPRFEMLIDWGWFYF 341
                 F+  EI        T    ++ G   + T+  ++    +I      I     Y 
Sbjct: 293 NIVGQTFTTLEIPYNRAHDFTFPIEIYYGPNHYSTLKSFDNGLESIIPLGSGIFAFVKYV 352

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
               +  + ++    +GN+G+ I+L T+F++LL  P   + YVS A MK ++P+ID L+ 
Sbjct: 353 NKWIIIPVFNFLSGFIGNYGLIIILLTIFIRLLIAPFTYQSYVSQAKMKVLKPEIDALKA 412

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           K      Q      ++L+++  +NPL GC P L+Q+P+  A+Y     S+E+R    + W
Sbjct: 413 KHGD-DQQAFGVEQMKLFRSAGVNPLGGCLPALMQLPILVAMYSFFPSSIELRQES-FLW 470

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
             DL+A D  +I  L   +PFY     HV ++ ++M+ +  +    +   AD+    ++ 
Sbjct: 471 ATDLSAYD--SILNLPFTIPFYGN---HVSLFTLLMTATSLMLAFNNRGMADQSNP-VMK 524

Query: 522 WMPVVFVFA----LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           +MP VF        +   + L  Y+  SNVISI  Q  I K       +  +++    K 
Sbjct: 525 YMPYVFPIMLLGIFNRLASALTFYYFLSNVISIGLQWAIQKFFVNHDKIHAQIQEN-KKK 583

Query: 578 YNSQ 581
             S+
Sbjct: 584 PASK 587


>gi|203284351|ref|YP_002222091.1| 60kDa inner-membrane protein [Borrelia duttonii Ly]
 gi|254772750|sp|B5RLZ9|OXAA_BORDL RecName: Full=Inner membrane protein oxaA
 gi|201083794|gb|ACH93385.1| 60kDa inner-membrane protein [Borrelia duttonii Ly]
          Length = 545

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 118/569 (20%), Positives = 227/569 (39%), Gaps = 47/569 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M  N     A+ LS+  +  +     +    + ++              D   + +  D 
Sbjct: 1   MSPNKRILRAVYLSLFFIGIFMLLDDFLFSRKASSFMNEEIKFDLNKDFDIDNSLIDEDF 60

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                  S  + +       +    G     L L+ + L++      +  + P N    Y
Sbjct: 61  TFNLSDNSEDINVDTDIYHATFATFGGNLISLKLKNH-LNLDKKPTEIVKMHPQNQSLFY 119

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
                            S +++               +          +R      +   
Sbjct: 120 ITLDKL-----------SKSLFLYEQIDSHVHDFKTNVEVNGKYYEYIKRYTFSKSNEYL 168

Query: 181 KIVDTVTNNS--IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
             ++   NN    D I       ++    +  +    +Q             + +Y    
Sbjct: 169 IKLEIFLNNIDVNDDIGIDFYKFVLNSGIEELSAKGKLQYNNYLSHAIYYDTKLRY---- 224

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
                    +  W+G   KY+  +     + +   +FK+ +     +           L 
Sbjct: 225 -GKDGLNIANPKWVGAGTKYFEVLV---SKENMKVEFKHENKVLNAFILN-------KLD 273

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
            K+++   +++AG ++   +  + +       L+   F M ++    YF+  PM ++M  
Sbjct: 274 NKNVSDVFYIYAGPRDNKYLDIFNQRELNSFGLSNVEFGMSVEKSLLYFLQVPMQLIMQI 333

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
           FYN++ N+G++IM  T+ V++L FPL  K + +TA +  +QPK+ E++ KF +S P+ L 
Sbjct: 334 FYNVIPNWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKF-KSDPKRLN 392

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPT 471
           + M +LY+   +NP+ GC+PILLQ+PVFFA+Y +++    +R A F  GWI DL+  D  
Sbjct: 393 EEMSKLYREEGVNPIGGCFPILLQLPVFFALYGLVNNFFVLRGASFIPGWIDDLSIGDSI 452

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVF 527
             F       + +  +  + I P IM ++  +   +S   + K    Q   L + MP++F
Sbjct: 453 YYFG------YKVFAWTDIRILPFIMMITQLLSTIVSSNVSFKSLGAQQKFLYFGMPIMF 506

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            F L   P+GL+IYW  +N+ +I+QQ  I
Sbjct: 507 FFILYDMPSGLLIYWITTNIFTILQQYYI 535


>gi|89074710|ref|ZP_01161168.1| putative inner membrane protein translocase component YidC
           [Photobacterium sp. SKA34]
 gi|89049474|gb|EAR55035.1| putative inner membrane protein translocase component YidC
           [Photobacterium sp. SKA34]
          Length = 230

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 93/228 (40%), Positives = 144/228 (63%), Gaps = 21/228 (9%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           + D+GW  FIA P+  L+++ + +VGN+GIAI++ T+ V+ L +PL K QY S A M+ +
Sbjct: 10  IPDYGWSSFIASPLHELLAFIHGIVGNWGIAIIILTLIVRGLMYPLTKAQYTSMAKMRML 69

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QPKI  +RE+F     Q   + M++LYKT  +NPL GC P+L+Q+P+F A+Y V+++S E
Sbjct: 70  QPKIQAMRERFGD-DRQRQSQEMMELYKTEKVNPLGGCLPLLIQMPIFIALYTVLNLSTE 128

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511
           +R+APF+GWI++L+A DP                     + PI+M +SMF   K SP   
Sbjct: 129 LRNAPFFGWIQNLSAQDPYY-------------------VLPILMGISMFFIQKNSPSAV 169

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            D  Q  I+ +MPV+F      FPAGL++YW  SN+++++QQ +I + 
Sbjct: 170 TDPMQQKIMTFMPVIFTVFFLYFPAGLVLYWLTSNIVTLIQQTIIFRK 217


>gi|203287885|ref|YP_002222900.1| 60 kDa inner-membrane protein [Borrelia recurrentis A1]
 gi|254772753|sp|B5RRP5|OXAA_BORRA RecName: Full=Inner membrane protein oxaA
 gi|201085105|gb|ACH94679.1| 60 kDa inner-membrane protein [Borrelia recurrentis A1]
          Length = 545

 Score =  194 bits (491), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 118/569 (20%), Positives = 227/569 (39%), Gaps = 47/569 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M  N     A+ LS+  +  +     +    + ++              D   + +  D 
Sbjct: 1   MSPNKRILRAVYLSLFFIGIFMLLDDFLFSRKASSFMNEEIKFDLNKDFDIDNSLIDEDF 60

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                  S  + +       +    G     L L+ + L++      +  + P N    Y
Sbjct: 61  TFNLSDNSEDINVDTDIYHATFATFGGNLISLKLKNH-LNLDKKPTEIVKVHPQNQSLFY 119

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
                            S +++               +          +R      +   
Sbjct: 120 ITLDKL-----------SKSLFLYEQIDSHVHDFKTNVEVNGKYYEYIKRYTFSKSNEYL 168

Query: 181 KIVDTVTNNS--IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
             ++   NN    D I       ++    +  +    +Q             + +Y    
Sbjct: 169 IKLEIFLNNIDVNDDIGIDFYKFVLNSGIEELSAKGKLQYNNYLSHAIYYDTKLRY---- 224

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
                    +  W+G   KY+  +     + +   +FK+ +     +           L 
Sbjct: 225 -GKDGLNIANPKWVGAGTKYFEVLV---SKENMKVEFKHENKVLNAFILN-------KLD 273

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
            K+++   +++AG ++   +  + +       L+   F M ++    YF+  PM ++M  
Sbjct: 274 NKNVSDVFYIYAGPRDNKYLDIFNQRELNSFGLSNVEFGMSVEKSLLYFLQVPMQLIMQI 333

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
           FYN++ N+G++IM  T+ V++L FPL  K + +TA +  +QPK+ E++ KF +S P+ L 
Sbjct: 334 FYNVIPNWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKF-KSDPKRLN 392

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPT 471
           + M +LY+   +NP+ GC+PILLQ+PVFFA+Y +++    +R A F  GWI DL+  D  
Sbjct: 393 EEMGKLYREEGVNPIGGCFPILLQLPVFFALYGLVNNFFVLRGASFIPGWIDDLSIGDSI 452

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW-MPVVF 527
             F       + +  +  + I P IM ++  +   +S   + K    Q   L + MP++F
Sbjct: 453 YYFG------YKVFAWTDIRILPFIMMITQLLSTIVSSNVSFKSLGSQQKFLYFGMPIMF 506

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            F L   P+GL+IYW  +N+ +I+QQ  I
Sbjct: 507 FFILYDMPSGLLIYWITTNIFTILQQYYI 535


>gi|303237161|ref|ZP_07323731.1| membrane protein insertase, YidC/Oxa1 family [Prevotella disiens
           FB035-09AN]
 gi|302482548|gb|EFL45573.1| membrane protein insertase, YidC/Oxa1 family [Prevotella disiens
           FB035-09AN]
          Length = 638

 Score =  194 bits (491), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 99/610 (16%), Positives = 220/610 (36%), Gaps = 52/610 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN---------------ERKNIQTVKQ 45
           M+   N     AL  ++++ +  +      E                    ++  +  + 
Sbjct: 1   MD--KNTIAGFALIALVLFGFAWWQQPSEKELAQQRTEFVKDSIANAKKIAKQKKEVAQT 58

Query: 46  PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------L 99
            N+   + A       A A   +  + LKN  +  ++N KG       ++GY        
Sbjct: 59  ANKTIAANADTTALFYAAANGTAQNIVLKNNKVELTLNTKGGVVRQAIIKGYTGHNVTSK 118

Query: 100 DVSSNSPIVTLLSPSNTKNAYFAEL--DYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157
           D  ++   VTL S ++ +  +      D + T N    P++ T   +           + 
Sbjct: 119 DRKTDKQDVTLFSGADQELNFILATKQDNIETKNMYFTPSNVTDSTVTLTATDKSGKTLV 178

Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           L +K  +  L    I                    Q +   +      + + AT T+   
Sbjct: 179 LDYKLKSPYLLSLNIKATGMNGLFKPGENQLLIDWQEKCKQQELGYTFENRYATLTYKES 238

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
           EG              Y    K       E   W+   ++++++V I     +  ++ K 
Sbjct: 239 EGST-----------DYLSETKEDEKATEERLDWVAFKNQFFSAVMISKDGFAIGAKLKS 287

Query: 278 LSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
           +      +  K     +     P  +  +    + G  +F  +   E      +   +  
Sbjct: 288 IPQQKESHYLKQYHASMNTAFDPTGAKASQFEFYFGPNDFRLLQSVENQSTFGKSLDMQR 347

Query: 336 WGWFYFI-----AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
             +  +       +   + +  + + +   G+ ++L T+ +K + FP+ KK Y+S+A M+
Sbjct: 348 LVYLGWPLFRIINRWFTIYVFDWLSKLFPMGVVLILITLLLKFITFPMVKKSYMSSAKMR 407

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
            ++PK+DE  +++ +   Q+ ++  +   Y  + ++PL+GC P+L+Q P++ A++  +  
Sbjct: 408 VLKPKLDEATKQYNKPEDQMQKQQAMMQMYSEYGVSPLSGCLPMLIQAPIWIAMFNFVPN 467

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKM 507
           ++++R    + W+ DL+  DP   ++    +         +      I+ S     Q K 
Sbjct: 468 AIQLRGE-KFLWMDDLSTFDPIISWSQNLWIIGDHISLTCILFCATNILYSWFTMQQQKD 526

Query: 508 SPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                   Q      ++  MPV F F  + + +GL  Y+  S   S      + +    +
Sbjct: 527 QMVGQQAEQMKTMQWMMYLMPVFFFFMFNDYSSGLNFYYFISLFFSAAIMWTL-RKTTDD 585

Query: 564 IGLIDRLRST 573
             L+  L + 
Sbjct: 586 EKLLSILEAR 595


>gi|312148357|gb|ADQ31016.1| inner membrane protein OxaA [Borrelia burgdorferi JD1]
          Length = 544

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 116/571 (20%), Positives = 230/571 (40%), Gaps = 47/571 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M ++      + LS+ ++  +           ++++  + +     N+  N      +  
Sbjct: 1   MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFNDNEMSSVKS 60

Query: 61  RAQA-LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
            +   ++ S  + ++    + + +        L L+ +   ++       L++       
Sbjct: 61  NSFNLINKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F         +            L                 N     + +  +  +   
Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167

Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           + +   VT N ++      F     I   + +  ++   +Q             + KY  
Sbjct: 168 YLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
                      +  W+G S KY+  +     + +   +FK        +          +
Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350
              K+I+   F++AG K+   +  ++K            F M ++  ++Y I  PM M+M
Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVM 333

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
             FY+++ N+G++I+  T+ V++L FPL  K + +TA +  +QP++ EL+ KF +  P+ 
Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPRMKELQAKF-KHDPKK 392

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469
           L + M +LYK   +NPL GC P++LQ+P+FFA+Y +++    +R A F  GWI DL+  D
Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525
               F        Y   +  + I P IM  +      +S     K    Q   L + MP+
Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F F L + P+GL+IYW  +N+ +I+QQ  I
Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539


>gi|34540342|ref|NP_904821.1| putative inner membrane protein translocase component YidC
           [Porphyromonas gingivalis W83]
 gi|38502879|sp|P60036|OXAA_PORGI RecName: Full=Inner membrane protein oxaA
 gi|34396654|gb|AAQ65720.1| membrane protein, putative [Porphyromonas gingivalis W83]
          Length = 627

 Score =  193 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 112/618 (18%), Positives = 233/618 (37%), Gaps = 54/618 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-------Y 53
           M+   N  + + L  ++++ +         E     +  I+  +Q +             
Sbjct: 1   MD--KNTVIGLVLIGLVIFGFSWLNRPDPQEIEAQRKAAIEAARQDSIAKAEAELLAART 58

Query: 54  AAVLIDDRAQALSMSP-------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
                D   QA   +              +VEL N  +   ++ KG    ++ LR Y   
Sbjct: 59  QGATPDSIKQAAGYNQYGLLAAATAGAEEQVELANGKIALKLSTKGGAIREVLLRDYKT- 117

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
              +   + L     +              +  +L  S       S  +         + 
Sbjct: 118 --HDGKPLYLFREGESDFNLPLRTVDNRLVDTRDLYFSPISRTDSSVVMRLAVDSASYLD 175

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTN-NSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
                      + L + Y  ++  +  N  S+     + +      + +    ++  +  
Sbjct: 176 LA--------YVLLPDDYRLRMTVSGQNLQSLFPANMTMQDLEWSQRIRRQEKSWKFENQ 227

Query: 220 FIAVLGDKSLVEQK-YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
           + ++    S  E    SD ++       E   W+   DKY+ASV +       +   +  
Sbjct: 228 YTSIYYKYSGDEVDRLSDSKQEDKKTLEEPLHWVSFKDKYFASVLVCDSYFENNKLAQKT 287

Query: 279 SDGHARYQAKFSANEITILPGKSIT-TTNFLFAGAKEFPTIHHYEKDL------AIPRFE 331
           +   + Y    + +    L  +S T      F G  ++  +  Y+K +       +    
Sbjct: 288 AAAGSDYLKNCTMSATFPLDVRSGTKARFTFFFGPLKYNMLRAYDKGMKAEDNLDLDHLV 347

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
            L    + +     +    ++      N+G+ I+L T+ +KLL  PLA K Y+S+A M+ 
Sbjct: 348 YLGASIFRWINRYMIIPASTFLQQYFSNWGLIILLLTLGIKLLISPLAYKGYLSSAKMRL 407

Query: 392 IQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           ++P++ E+  K+           Q A + LY+     P++GC P+LLQ P   A+Y    
Sbjct: 408 LRPQVQEINAKYPGKDQESMMKRQSATMNLYRAAGAGPMSGCLPMLLQFPFLIAMYMYFP 467

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
            ++++R    + W +DL++ D    +T    L        HV ++ ++MS+S  + ++ +
Sbjct: 468 TTIDIRQQS-FLWAEDLSSYDAVFSWTADIPL-LSQFYGNHVSLFCLLMSISNILYIRYT 525

Query: 509 PPPADKGQ--AMILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
              +D GQ    +L WMP    V+F+F  +   +GL  Y+  S++I+++Q  +  +    
Sbjct: 526 MNQSDTGQEGMAMLKWMPYITTVMFLFFFNQNASGLCYYYFLSSIITVIQ-YMSSRFIIN 584

Query: 563 EIGLIDRLRSTFSKNYNS 580
           E  L+ +L +  +K    
Sbjct: 585 EEKLMAKLEANKTKPRKK 602


>gi|313886342|ref|ZP_07820067.1| membrane protein insertase, YidC/Oxa1 family [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|332300282|ref|YP_004442203.1| Membrane protein oxaA [Porphyromonas asaccharolytica DSM 20707]
 gi|312924211|gb|EFR34995.1| membrane protein insertase, YidC/Oxa1 family [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|332177345|gb|AEE13035.1| Membrane protein oxaA [Porphyromonas asaccharolytica DSM 20707]
          Length = 626

 Score =  193 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 100/573 (17%), Positives = 217/573 (37%), Gaps = 32/573 (5%)

Query: 29  RIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQ 88
           +++         ++    + V  +    L               L+N  L  + + +GA 
Sbjct: 41  QVQTNTAVAATEESQTTSDAVKPAPVDSLYAFSQLMSQPVKEYTLQNEKLCVTFSTQGAM 100

Query: 89  FDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK 148
                L  Y   +S +S  V L +P +     F     + T  N  L   + +W   + +
Sbjct: 101 PVSAELADY---LSYDSTQVRLFAPGD-----FMLNLPIRTNQNQILETKDLIWQ--ANQ 150

Query: 149 ILTPTTPIKLVFKNANNILFERTISLDEHY-LFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207
               T  + L   +++ +    T+  + +     I      + +          +    P
Sbjct: 151 PNDSTLLMTLPIDSSSYLRIIYTMPHEGYMLGMAIEAQGLGSLLQSNNAIQDLEMSLRIP 210

Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267
           +   +     +         +   +K  + +     +  E   W+ + DK++++V I   
Sbjct: 211 RQERSWKFENQYSTIYYKYPADDVEKLKETKMEQEKDVREKIQWVAMKDKFFSTVLIGLG 270

Query: 268 E---TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324
           +         FK         +         +           LF G  ++  +   +  
Sbjct: 271 DTRLEGNKMSFKTEPKETDYIKVCNYKGSFAMDIRDGRKADFALFMGPLDYNMLKGMDAG 330

Query: 325 LAIPRFEMLIDWGWF------YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378
           +   +   L    +       +     +  L+ +    + N+GI I+L T+ +KL+  PL
Sbjct: 331 VDKAQRLDLKRMIYVGGSLFRWINVTLIRPLIDFLQGFISNWGIIILLLTLIIKLVLSPL 390

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILL 435
             K Y+S A M+ ++P+++ +  K+     Q++    +A +QLY+    +P++GC P+LL
Sbjct: 391 TFKSYMSQAKMRVLKPQVEAINAKYAGDDQQMMMKRSQATMQLYRNAGASPMSGCLPMLL 450

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           Q+P   A+Y     ++++R    + W+KDL+  DP   ++        L G  H+ ++ +
Sbjct: 451 QMPFLIALYMFFPTAIDLRGES-FLWVKDLSTYDPIISWSTDIPFITGLLGGNHISLFCL 509

Query: 496 IMSLSMFIQMKMSP---PPADKGQAMILNWMPVVFVFALSSF----PAGLIIYWSWSNVI 548
           + +++  I  + +      AD  Q  ++ +MP +       F     AGL  Y+  S +I
Sbjct: 510 LWAVTNIIYSRYTMSMSAGADNSQMKMMRFMPYIMTIMFFIFFNSNAAGLTYYYFISTLI 569

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +I+Q  V  ++   E  ++ RL     K    +
Sbjct: 570 TILQ-FVASRLLINEEKVLARLEENQRKPKKKK 601


>gi|205356681|ref|ZP_03223442.1| putative membrane protein [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205345419|gb|EDZ32061.1| putative membrane protein [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 403

 Score =  193 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 116/398 (29%), Positives = 199/398 (50%), Gaps = 49/398 (12%)

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
             E+ I+      ++I   ++ N+              ++P  A +++ V    + +   
Sbjct: 44  KIEKDITFYPKGNYEIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNK 95

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286
           +++   K  D+EK   +N     S     D+Y+A+             F           
Sbjct: 96  ETIETYKDGDVEKDESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAI 140

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
           +K +     +            + G+KE   +   +     PR E ++++GWF FIAKPM
Sbjct: 141 SKDTNQNPIVFAYSDNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPM 195

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F  +++ +  + N+G AI++ T+ V+++ FPL  K  +S   +K++ PK+ ++RE++K  
Sbjct: 196 FEFLNFLHQYIENWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG- 254

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            PQ +   M++LYK H  NP++GC PILLQIP+FFAIY+V+  ++E++ AP+  WI DL+
Sbjct: 255 DPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLS 314

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPV 525
             DP                     I PI+M  +MF+Q  ++P    D  QA I+ ++PV
Sbjct: 315 VMDPYF-------------------ILPILMGATMFLQQLITPITIQDPMQAKIMKFLPV 355

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           +F F   +FPAGL +YW  +N+ S+VQQ VI K+   E
Sbjct: 356 IFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKIFVKE 393


>gi|110638943|ref|YP_679152.1| putative inner membrane protein translocase component YidC
           [Cytophaga hutchinsonii ATCC 33406]
 gi|123058652|sp|Q11S04|OXAA_CYTH3 RecName: Full=Inner membrane protein oxaA
 gi|110281624|gb|ABG59810.1| protein translocase subunit yidC [Cytophaga hutchinsonii ATCC
           33406]
          Length = 620

 Score =  193 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 112/604 (18%), Positives = 222/604 (36%), Gaps = 50/604 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + I+L  +++  +  F      E        I    Q + V    AA     
Sbjct: 1   MD--KNQIIGISLISVLMLGYFGFMSTQTPETPVTTPPAITQPVQSDTVLLKSAATDTAL 58

Query: 61  RAQA-----------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109
           +AQ            +  +   +L+N  ++ +++ KG     + L+ Y      +   + 
Sbjct: 59  KAQNQREYGDFAAAMVGEAKEYKLENKDVVVTLSTKGGTIKSVLLKNYFT---WDKKQLF 115

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           L    N + +            N +  +  +++             +       N    E
Sbjct: 116 LFKQENNQLSLIL-------NTNKKPVDLYSLYYAGVESKAGDKQVVTFKTDAGNGKTIE 168

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
            T +L     F +   +          +    +   +          Q    + +   + 
Sbjct: 169 HTYTL-GAAGFTVDYNLKAAGFGGELPNLPLTLDWREQVERIEYDSEQARVKSTVNYMAA 227

Query: 230 VEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
            +      +  K   +    +  W+ +  K++ S F   +  +  S        ++    
Sbjct: 228 EDGFDYLSEASKDRETETLSNVYWVSLKQKFFNSGFYIREGGTIPSATVTAYPMYSTLPN 287

Query: 288 KFSANEITILPGK-----------SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
               +E  I   +           S       + G  +F        +       +    
Sbjct: 288 APVNSEKFIKALEAQVQLPLEAVISGKAAYAFYFGPNDFKICKAVPAENYQKNVNLG-WP 346

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
              +     +  +      +  +FG+ I++  + +KL+  PL+ K +VS A MK ++P++
Sbjct: 347 LVSWINRFVVIPVFDGLKGVFSSFGLIIVILVLLIKLVLLPLSYKSFVSMAKMKALKPEL 406

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           DEL+ K      Q +Q   +Q+YK   INPL+GC P+LLQ+P+  A++     ++++R  
Sbjct: 407 DELKAKHGD-DQQAIQMEQMQVYKQFGINPLSGCIPVLLQMPILLAMFNFFPNAIDLRGE 465

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPAD 513
               W  DL++ D      L   +PFY     HV ++ ++M++S      ++        
Sbjct: 466 S-LWWATDLSSYD--EFAKLPFTIPFYGS---HVSMFTLLMTISTLAYTWVNNQVSTVTG 519

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
                +   MPVVF+F L+SFPAGL  Y+  SN+++I QQ +I +    E  L  +L + 
Sbjct: 520 PM-KYMSYAMPVVFLFVLNSFPAGLSFYYFVSNLVTIAQQLII-RRFVDEGQLRLQLEAK 577

Query: 574 FSKN 577
             KN
Sbjct: 578 RDKN 581


>gi|224533541|ref|ZP_03674130.1| inner membrane protein OxaA [Borrelia burgdorferi CA-11.2a]
 gi|224513214|gb|EEF83576.1| inner membrane protein OxaA [Borrelia burgdorferi CA-11.2a]
 gi|312149425|gb|ADQ29496.1| inner membrane protein OxaA [Borrelia burgdorferi N40]
          Length = 544

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 116/571 (20%), Positives = 231/571 (40%), Gaps = 47/571 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59
           M ++      + LS+ ++  +           ++++  + +         D++  + +  
Sbjct: 1   MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKS 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
           +    ++ S  + ++    + + +        L L+ +   ++       L++       
Sbjct: 61  NSFNLINKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F         +            L                 N     + +  +  +   
Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167

Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           + +   VT N ++      F     I   + +  ++   +Q             + KY  
Sbjct: 168 YLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
                      +  W+G S KY+  +     + +   +FK        +          +
Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350
              K+I+   F++AG K+   +  ++K            F M ++  ++Y I  PM M+M
Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVM 333

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
             FY+++ N+G++I+  T+ V++L FPL  K + +TA +  +QPK+ EL+ KF +  P+ 
Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKK 392

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469
           L + M +LYK   +NPL GC P++LQ+P+FFA+Y +++    +R A F  GWI DL+  D
Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525
               F        Y   +  + I P IM  +      +S     K    Q   L + MP+
Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F F L + P+GL+IYW  +N+ +I+QQ  I
Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539


>gi|15605744|ref|NP_213121.1| hypothetical protein aq_175 [Aquifex aeolicus VF5]
 gi|38502858|sp|O66561|OXAA_AQUAE RecName: Full=Inner membrane protein oxaA
 gi|2982916|gb|AAC06534.1| hypothetical protein aq_175 [Aquifex aeolicus VF5]
          Length = 502

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 115/561 (20%), Positives = 226/561 (40%), Gaps = 80/561 (14%)

Query: 1   MERN-----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55
           M  N       + +   L  + + A++ FY+Y        + +  + VK+    + +   
Sbjct: 1   MMDNDNQFWKRFLIFTILMFLFITAYELFYIYYVKPSQPQKTEKKEVVKKEEFKNVNLPQ 60

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
           +++    +         +K       ++ KG +      + Y  D+ S +     + P  
Sbjct: 61  LMLGTFREKQEYKNTKTVKLGIYSLELSEKGGKILRFIDQKYGFDLISKAERELKIFP-- 118

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
                   L+  +   +++   +   + +  GK        +L           + I   
Sbjct: 119 --------LEIFTGNPDLDQKLNFGEYEIKEGKNSVELIHKELK---------VKKILSY 161

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
           ++    +               P   +    P      +      + + G+   ++    
Sbjct: 162 KNGAIHLSVEGL---------KPPFWVFVGSPPDDEAFYTHVGPVLKINGEVVRLDVDD- 211

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
                 I+ F  +  + G   +Y+           +     Y          KF +    
Sbjct: 212 ---LKGINEFEGNIEFGGEESRYFF-----KGAKDYQKHIVYKVKLGD----KFVSLSTF 259

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355
           +  G+       ++ GAK++  +               +DWG    I KP+F+ + + Y 
Sbjct: 260 LYDGEKT-----IYLGAKDYARLREL-------GLVDTLDWGTLKIIVKPLFLFLYWIYE 307

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
             G++ ++I++ T  V++  FPL  K  VS   ++ + PK++++++K+K  P ++ Q+ M
Sbjct: 308 HTGSWVLSILVLTFIVRIFLFPLGYKSVVSMQKLQELAPKMEKIKQKYKDDPVKM-QEEM 366

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           ++LY     NP+AGC PILLQIP+FFA+YKV+ I+++++    + WI  LA  DP     
Sbjct: 367 MKLYAETGFNPMAGCLPILLQIPIFFALYKVLIITVDLK-VSSFLWIPSLADKDPYY--- 422

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
                           I P+IM L+M +Q KM+P P D  QA++     V F     +FP
Sbjct: 423 ----------------ILPVIMGLTMILQQKMTPSP-DPKQALVGYITSVAFTLLFINFP 465

Query: 536 AGLIIYWSWSNVISIVQQAVI 556
           AGL++YW+ +NV +I+Q  +I
Sbjct: 466 AGLVLYWTLNNVFNIIQNYLI 486


>gi|216264429|ref|ZP_03436421.1| inner membrane protein OxaA [Borrelia burgdorferi 156a]
 gi|215980902|gb|EEC21709.1| inner membrane protein OxaA [Borrelia burgdorferi 156a]
          Length = 544

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 111/568 (19%), Positives = 230/568 (40%), Gaps = 41/568 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59
           M ++      + LS+ ++  +           ++++  + +         D++  + +  
Sbjct: 1   MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKS 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
           +    ++ S  + ++    + + +        L L+ +   ++       L++       
Sbjct: 61  NSFNLINKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F         +            L                 N     + +  +  +   
Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           + +   VT N ++    +           ++       +  +      S +    + ++ 
Sbjct: 168 YLMKFKVTVNGLEDY--NLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY 225

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
                   +  W+G S KY+  +     + +   +FK        +          +   
Sbjct: 226 GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGILKSFIIN------NVRNK 276

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLMSYF 353
           K+I+   F++AG K+   +  ++K            F M ++  ++Y I  PM M+M  F
Sbjct: 277 KNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVF 336

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           Y+++ N+G++I+  T+ V++L FPL  K + +TA +  +QP++ EL+ KF +  P+ L +
Sbjct: 337 YDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPRMKELQVKF-KHDPKKLNE 395

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472
            M +LYK   +NPL GC P++LQ+P+FFA+Y +++    +R A F  GWI DL+  D   
Sbjct: 396 EMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVY 455

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVFV 528
            F        Y   +  + I P IM  +      +S     K    Q   L + MP++F 
Sbjct: 456 HFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFF 511

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556
           F L + P+GL+IYW  +N+ +I+QQ  I
Sbjct: 512 FILYNMPSGLLIYWITTNIFTILQQYYI 539


>gi|223888963|ref|ZP_03623554.1| inner membrane protein OxaA [Borrelia burgdorferi 64b]
 gi|223885779|gb|EEF56878.1| inner membrane protein OxaA [Borrelia burgdorferi 64b]
          Length = 544

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 116/571 (20%), Positives = 231/571 (40%), Gaps = 47/571 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59
           M ++      + LS+ ++  +           ++++  + +         D++  + +  
Sbjct: 1   MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKS 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
           +    ++ S  + ++    + + +        L L+ +   ++       L++       
Sbjct: 61  NSFNLINKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F         +            L                 N     + +  +  +   
Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167

Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           + +   VT N ++      F     I   + +  ++   +Q             + KY  
Sbjct: 168 YLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
                      +  W+G S KY+  +     + +   +FK        +          +
Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350
              K+I+   F++AG K+   +  ++K            F M ++  ++Y I  PM M+M
Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFNIFFGMSVEKSFWYLIQVPMQMVM 333

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
             FY+++ N+G++I+  T+ V++L FPL  K + +TA +  +QPK+ EL+ KF +  P+ 
Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKK 392

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469
           L + M +LYK   +NPL GC P++LQ+P+FFA+Y +++    +R A F  GWI DL+  D
Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525
               F        Y   +  + I P IM  +      +S     K    Q   L + MP+
Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F F L + P+GL+IYW  +N+ +I+QQ  I
Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539


>gi|224532508|ref|ZP_03673133.1| inner membrane protein OxaA [Borrelia burgdorferi WI91-23]
 gi|224512580|gb|EEF82956.1| inner membrane protein OxaA [Borrelia burgdorferi WI91-23]
          Length = 544

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 112/568 (19%), Positives = 230/568 (40%), Gaps = 41/568 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59
           M ++      + LS+ ++  +           ++++  + +         D++  + +  
Sbjct: 1   MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKS 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
           +    ++ S  + ++    + + +        L L+ +   ++       L++       
Sbjct: 61  NSFNLINKSQDIIVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F         +            L                 N     + +  +  +   
Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           + +   VT N ++    +           ++       +  +      S +    + ++ 
Sbjct: 168 YLMQFKVTVNGLEDY--NLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY 225

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
                   +  W+G S KY+  +     + +   +FK        +          +   
Sbjct: 226 GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NVRNK 276

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLMSYF 353
           K+I+   F++AG K+   +  ++K            F M ++  ++Y I  PM M+M  F
Sbjct: 277 KNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVF 336

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           Y+++ N+G++I+  T+ V++L FPL  K + +TA +  +QPK+ EL+ KF +  P+ L +
Sbjct: 337 YDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKKLNE 395

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472
            M +LYK   +NPL GC P++LQ+P+FFA+Y +++    +R A F  GWI DL+  D   
Sbjct: 396 EMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVY 455

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVFV 528
            F        Y   +  + I P IM  +      +S     K    Q   L + MP++F 
Sbjct: 456 HFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFF 511

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556
           F L + P+GL+IYW  +N+ +I+QQ  I
Sbjct: 512 FILYNMPSGLLIYWITTNIFTILQQYYI 539


>gi|255534414|ref|YP_003094785.1| OxaI/YidC membrane insertion protein [Flavobacteriaceae bacterium
           3519-10]
 gi|255340610|gb|ACU06723.1| OxaI/YidC membrane insertion protein [Flavobacteriaceae bacterium
           3519-10]
          Length = 604

 Score =  192 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 106/595 (17%), Positives = 224/595 (37%), Gaps = 34/595 (5%)

Query: 1   MERN----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M++N     N  ++ AL  +I+     ++   +  E                   +    
Sbjct: 1   MQQNNGLDKNQLISFALFSLILIGAMFYFQNKQATEQQLINAQNPAQTASAATAPATKPA 60

Query: 57  LIDDRAQALSMS--PRVELKNPSLIGSINLKGAQFDDLNLRGYHL---DVSSNSPIVTLL 111
           +I +   +L  +   +V+LKN  L  S++  G Q   + L  Y        +N   + L 
Sbjct: 61  VITNLNDSLKTTSIQQVQLKNKELTLSVSSLGGQISTVQLNEYKAYNRKTDANDKELLLF 120

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
             +N+   +  +     T N  +L                    + +       ++    
Sbjct: 121 DKNNSTYGFQFKDKTGKTFNTKDLVF----------TPTQNGNTVTMQANVNGAVIQFIY 170

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
             LD++    +   V    + Q+    +   +             QE             
Sbjct: 171 TLLDKYT---VDFNVKTQGLSQLVSDQKATFVWDFNAREMEKGRSQEQTHTEFNYSFDNY 227

Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291
             +    ++S+    E+ +WL I  +++++V  P          + + D    +   F+ 
Sbjct: 228 SSFDYDGRTSMEEPDETLNWLAIKQQFFSAVIEPQTGFKNSVGSQEMIDEGE-FLKTFNF 286

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351
           N    L G  +      +    + P +  Y+K+     F+ L+  GW +      +  + 
Sbjct: 287 NGQVDLAGNELNQNFKWYFMPLDLPLLKSYDKN-----FDELLPLGWSFIGTMNRWFFIP 341

Query: 352 YFY---NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
            +    +     G  I L T+ VK++  P+  KQ+  +A M+ I+P+IDE+  K+K + P
Sbjct: 342 MYNLISSWGIAAGWVIFLMTIIVKIILSPVMFKQHKLSAMMRVIRPEIDEVNAKYKDADP 401

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
              Q+  + +Y+   +N +AGC P LLQIP+F+A+++     +++R    + + KDL A 
Sbjct: 402 MKKQQETMAVYRKAGVNQMAGCLPALLQIPIFYALFRFFPNMIDLRGKS-FWFAKDLTAY 460

Query: 469 DPTNI--FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
           D      F +  +        +   +  +I ++     ++           +++   P+ 
Sbjct: 461 DDVIKLPFNIPFLGEHLSIFAIACTVVILIYTVMTSGNIQQPQQEGMPNMKVLMYIFPIT 520

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           F+F L++  +GL  Y+  SN I+I+   VI      E  +   +++   K    +
Sbjct: 521 FLFFLNTGASGLSWYYFVSNAINILIILVIKYWILDEKKIHATIQANKQKEPKKE 575


>gi|15594787|ref|NP_212576.1| putative inner membrane protein translocase component YidC
           [Borrelia burgdorferi B31]
 gi|38502849|sp|O51398|OXAA_BORBU RecName: Full=Inner membrane protein oxaA
 gi|2688353|gb|AAB91510.1| inner membrane protein [Borrelia burgdorferi B31]
          Length = 544

 Score =  192 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 116/571 (20%), Positives = 231/571 (40%), Gaps = 47/571 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59
           M ++      + LS+ ++  +           ++++  + +         D++  + +  
Sbjct: 1   MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKS 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
           +    ++ S  + ++    + + +        L L+ +   ++       L++       
Sbjct: 61  NSFNLINKSQDIIVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F         +            L                 N     + +  +  +   
Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167

Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           + +   VT N ++      F     I   + +  ++   +Q             + KY  
Sbjct: 168 YLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
                      +  W+G S KY+  +     + +   +FK        +          +
Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350
              K+I+   F++AG K+   +  ++K            F M ++  ++Y I  PM M+M
Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVM 333

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
             FY+++ N+G++I+  T+ V++L FPL  K + +TA +  +QPK+ EL+ KF +  P+ 
Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKK 392

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469
           L + M +LYK   +NPL GC P++LQ+P+FFA+Y +++    +R A F  GWI DL+  D
Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525
               F        Y   +  + I P IM  +      +S     K    Q   L + MP+
Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F F L + P+GL+IYW  +N+ +I+QQ  I
Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539


>gi|329908682|ref|ZP_08274922.1| OxaI/YidC membrane insertion protein [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546632|gb|EGF31596.1| OxaI/YidC membrane insertion protein [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 198

 Score =  192 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 92/210 (43%), Positives = 136/210 (64%), Gaps = 20/210 (9%)

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           M+  + ++GN+G  I++ T+ +KL FFPL+   Y S A MK + PK+  +RE+F +S PQ
Sbjct: 1   MTQIHKILGNWGWTIIVLTMLIKLAFFPLSAASYRSMAKMKMVTPKMTAIRERF-KSDPQ 59

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            + +AM+ LYKT  INPL GC PI++QIPVF ++Y V+  S+EMR+AP+ GWI+DLA+ D
Sbjct: 60  KMNQAMMALYKTEKINPLGGCLPIVVQIPVFISLYWVLLASVEMRNAPWLGWIQDLASPD 119

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529
           P                     I P++M++SMF+Q K++P P D  QA I+ +MP++F  
Sbjct: 120 PYY-------------------ILPVLMAVSMFVQTKLNPKPPDPMQAKIMMFMPIIFSV 160

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
               FP+GL++YW  +NV+SI QQ VI K 
Sbjct: 161 MFFFFPSGLVLYWVVNNVLSIAQQWVITKK 190


>gi|332885946|gb|EGK06190.1| hypothetical protein HMPREF9456_00064 [Dysgonomonas mossii DSM
           22836]
          Length = 650

 Score =  192 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 100/595 (16%), Positives = 222/595 (37%), Gaps = 64/595 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV----------------- 43
           M+   N      L   ++  +         +    +++ I+                   
Sbjct: 1   MD--KNTITGFILIAAVIIGFTLLSRPSSEDIERQKQQRIKDSIEYAQTLQREQENKIDT 58

Query: 44  --------------KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89
                             Q  +S  AV     +        + L+N  L  + + KG + 
Sbjct: 59  SVVDKKTEKIDDFFSASAQQSDSTVAVTDSLPSAEQKPEQFITLENSKLKATFSTKGGRM 118

Query: 90  DDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI 149
             + L+ Y      +      L   N      A+   + T    ++ ++  +      K 
Sbjct: 119 VRVQLKDYMSYNRDDKKNTDSLYLFNND----ADFTLLLTNKQQKVLSTGKLIFTPIQKE 174

Query: 150 LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209
              +  ++  + ++  I F   ++ D++ +   ++ V    +    +S    +   +   
Sbjct: 175 GDNSLIMRYAYSDSQYIDFVYKLADDDYMMKYDINMVGMQPMLARTYSDVFEMKWSQRMR 234

Query: 210 ATNTFGVQEGFIAV-LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268
                   E   +         + K    +K+      E   W+   ++++A + I   +
Sbjct: 235 RQEKSVKNEQRYSHLTYKYVGGDVKEMSSDKNEEVEVKEPAKWIAFKNQFFAPILIADDK 294

Query: 269 TSF------HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322
                      Q    S+    ++A            +SIT     + G   +  + +Y+
Sbjct: 295 IETALLNSKVLQTDENSEYLKSFEATLYVPAKPGSAPESITAGFSYYLGPMSYSLLKNYD 354

Query: 323 -------KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375
                  K+L + +   L    + +     +  + +   N   + GI I+L T+ VKL+ 
Sbjct: 355 SNVKDANKELDLDKLVPLGWTLFRWVNQYFIVPIFNLLSNTGLSMGIVILLLTIIVKLVI 414

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPIL 434
            PL  K ++S+A M+ ++P+++E+ EK+ +       Q+A + LY    +NP++GC P+L
Sbjct: 415 SPLTYKSFMSSAKMRVLRPQVEEINEKYPKQEQAMEKQQATMALYSKAGVNPMSGCVPML 474

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           LQ+P+  A++     ++E+R    + W  DL+  D   IF     +P       H+ ++ 
Sbjct: 475 LQMPILIALFSFFPNAIELRQQS-FLWATDLSTYD--AIFEWKNHIPLIGT---HISLFC 528

Query: 495 IIMSLSMFIQMKMSPPPADKGQAM------ILNWMPVVFVFALSSFPAGLIIYWS 543
           I+M+++  +  K +    + GQ        ++  MP++F+F L+ +P+GL  Y+ 
Sbjct: 529 ILMTITNIVYTKFNMEMTNTGQQQMPGMKWMMYLMPLIFLFMLNDYPSGLTYYYF 583


>gi|325954218|ref|YP_004237878.1| membrane protein oxaA [Weeksella virosa DSM 16922]
 gi|323436836|gb|ADX67300.1| Membrane protein oxaA [Weeksella virosa DSM 16922]
          Length = 619

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 109/608 (17%), Positives = 225/608 (37%), Gaps = 47/608 (7%)

Query: 1   MERNWNY----FVAIALSVIIVYAWQNFYVYPRIEEMNNERKN----IQTVKQPNQVDNS 52
           M++  N+     +   L   I++    +   P  EE+  +++       T K      + 
Sbjct: 1   MQKERNFDFNQLIGFVLI-AILFGVYFWMTKPSEEELARQKQELLAKEATEKNKGTQKDI 59

Query: 53  YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD---VSSNSPIVT 109
                     Q +     V  +N  +   +N +G Q   + L+ +         ++  + 
Sbjct: 60  AQFPTDSLATQQVVKEENVTFENEHVKIQVNGRGGQIGLVQLKEHLAFDSLKGVDAQPLY 119

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           L+   N+      + +      N +  N+  +      +    T  + +  +        
Sbjct: 120 LVKDGNS------QFNLSFKDINGKTINTKELIFSPKQEQKGSTKVLTMTAQIGAGQ-LH 172

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
              S D+ Y                  +                                
Sbjct: 173 YIYSFDDKYGLDFQIRSQGLHRVTHDKNIALNWNLDAFSLEKGKDQEHYWSHTYFKLSGK 232

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD-GHARYQAK 288
              +Y            ES  W+    +++AS+          +      + G ++Y   
Sbjct: 233 NSVEYELFGADKWEE-KESIDWIAFKQQFFASILSFDGGLKNTNGGSINYEIGKSKYNKG 291

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY--FIAKPM 346
           F+ +    +    I           +F  +  Y        FE ++ +GW +  ++ K  
Sbjct: 292 FNFSAPIEIKSGEINQHLSWDFVPLDFNNLKKY----NDKGFEKIVSYGWGFLGWLNKYF 347

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F+ +      +  +G AI L T+ VKL+  P+  KQY  +A MK ++P+++EL EKFK  
Sbjct: 348 FLFIFQSLAKIVPYGWAIFLMTIVVKLVLSPIMYKQYRQSAMMKVLRPELNELNEKFKDP 407

Query: 407 PP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
                 Q+A +++Y+   +NPLAGC P LLQIP+F+A+++     +++R  P + + +DL
Sbjct: 408 KDAMKKQQATMEIYRKAGVNPLAGCLPALLQIPIFYALFRFFPNVIDLRGEP-FWFAEDL 466

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--------SPPPADKG-- 515
            A D  ++  +   +PF      H+ I+ ++  ++M +  K+        + P  +    
Sbjct: 467 TAFD--SVIQIPASIPFLNG---HLSIFALLYIVAMMVYFKVSGSMDNFNNMPQQEGMPN 521

Query: 516 ---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
                 ++  MP+ F   L+++ +GL  Y+  SNVI+I     I  +   E  +   ++ 
Sbjct: 522 MQFMKYMMYIMPIFFFVFLNNYASGLSWYYLVSNVINIFIVLYIKNVMIKEDKIHAMIQE 581

Query: 573 TFSKNYNS 580
             +K   +
Sbjct: 582 NKAKPMKT 589


>gi|188995310|ref|YP_001929562.1| putative inner membrane protein translocase component YidC
           [Porphyromonas gingivalis ATCC 33277]
 gi|254773011|sp|B2RKS0|OXAA_PORG3 RecName: Full=Inner membrane protein oxaA
 gi|188594990|dbj|BAG33965.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 627

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 111/618 (17%), Positives = 232/618 (37%), Gaps = 54/618 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-------Y 53
           M+   N  + + L  ++++ +         E     +  I+  +Q +             
Sbjct: 1   MD--KNTVIGLVLIGLVIFGFSWLNRPDPQEIEAQRKAAIEAARQDSIAKAEAELLAART 58

Query: 54  AAVLIDDRAQALSMSP-------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
                D   QA   +              +VEL N  +   ++ KG    ++ LR Y   
Sbjct: 59  QEATPDSIKQAAGYNQYGLLAAATAGAEEQVELANGKIALKLSTKGGAIREVLLRDYKT- 117

Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
              +   + L     +              +  +L  S       S  +         + 
Sbjct: 118 --YDGKPLYLFREGESDFNLPLRTLDNRLVDTRDLYFSPISRTDSSVVMRLAVDSASYLD 175

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTN-NSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
                      + L + Y  ++  +  N  S+     + +      + +    ++  +  
Sbjct: 176 LA--------YVLLPDDYRLRMTVSGQNLQSLFPANMTMQDLEWSQRIRRQEKSWKFENQ 227

Query: 220 FIAVLGDKSLVEQK-YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
           + ++    S  E    SD ++       E   W+   DKY+ASV +       +   +  
Sbjct: 228 YTSIYYKYSGDEVDRLSDSKQEDKKTLEEPLHWVSFKDKYFASVLVCDSYFENNKLAQKT 287

Query: 279 SDGHARYQAKFSANEITILPGKSITTT-NFLFAGAKEFPTIHHYEKDL------AIPRFE 331
           +   + Y    + +    L  +  T      F G  ++  +  Y+K +       +    
Sbjct: 288 AAAGSDYLKNCTMSATFPLDVRPGTKAGFTFFFGPLKYNMLRAYDKGMKAEDNLDLDHLV 347

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
            L    + +     +    ++      N+G+ I+L T+ +KLL  PLA K Y+S+A M+ 
Sbjct: 348 YLGASIFRWINRYMIIPASTFLQQYFSNWGLIILLLTLGIKLLISPLAYKGYLSSAKMRL 407

Query: 392 IQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           ++P++ E+  K+           Q A + LY+     P++GC P+LLQ P   A+Y    
Sbjct: 408 LRPQVQEINAKYPGKDQESMMKRQSATMNLYRAAGAGPMSGCLPMLLQFPFLIAMYMYFP 467

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
            ++++R    + W +DL++ D    +T    L        HV ++ ++MS+S  + ++ +
Sbjct: 468 TTIDIRQQS-FLWAEDLSSYDAVFSWTADIPL-LSQFYGNHVSLFCLLMSISNILYIRYT 525

Query: 509 PPPADKGQ--AMILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
              +D GQ    +L WMP    V+F+F  +   +GL  Y+  S++I+++Q  +  +    
Sbjct: 526 MNQSDTGQEGMAMLKWMPYITTVMFLFFFNQNASGLCYYYFLSSIITVIQ-YMSSRFIIN 584

Query: 563 EIGLIDRLRSTFSKNYNS 580
           E  L+ +L +  +K    
Sbjct: 585 EEKLMAKLEANKTKPRKK 602


>gi|195942021|ref|ZP_03087403.1| putative inner membrane protein translocase component YidC
           [Borrelia burgdorferi 80a]
 gi|226321073|ref|ZP_03796615.1| inner membrane protein OxaA [Borrelia burgdorferi 29805]
 gi|226233483|gb|EEH32222.1| inner membrane protein OxaA [Borrelia burgdorferi 29805]
          Length = 544

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 115/571 (20%), Positives = 230/571 (40%), Gaps = 47/571 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59
           M ++      + LS+ ++  +           ++++  + +         D++  + +  
Sbjct: 1   MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKS 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
           +    +  S  + ++    + + +        L L+ +   ++       L++       
Sbjct: 61  NSFNLIDKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F         +            L                 N     + +  +  +   
Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167

Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           + +   VT N ++      F     I   + +  ++   +Q             + KY  
Sbjct: 168 YLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
                      +  W+G S KY+  +     + +   +FK        +          +
Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350
              K+I+   F++AG K+   +  ++K            F M ++  ++Y I  PM M+M
Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVM 333

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
             FY+++ N+G++I+  T+ V++L FPL  K + +TA +  +QPK+ EL+ KF +  P+ 
Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKK 392

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469
           L + M +LYK   +NPL GC P++LQ+P+FFA+Y +++    +R A F  GWI DL+  D
Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525
               F        Y   +  + I P IM  +      +S     K    Q   L + MP+
Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F F L + P+GL+IYW  +N+ +I+QQ  +
Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYL 539


>gi|219684221|ref|ZP_03539165.1| inner membrane protein OxaA [Borrelia garinii PBr]
 gi|219672210|gb|EED29263.1| inner membrane protein OxaA [Borrelia garinii PBr]
          Length = 544

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 118/568 (20%), Positives = 224/568 (39%), Gaps = 41/568 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M ++      + LS+ ++  +           ++ +  + +     N+  +     L   
Sbjct: 1   MNQSKRILRTVYLSLFLIGLFMLINDIFSSSMLSFKSSDKEVQFDLNKSFDDNEIFLSKS 60

Query: 61  RA-QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
            +   ++ S  + ++      + +        L L+ +   ++       L++       
Sbjct: 61  NSFDLINKSQNIVVETEIYFATFSTFRGNLVSLKLKNH---LNLEKDPTDLINVDYKNET 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F          ++ L        L                 +     + +  +  E   
Sbjct: 118 FF----------DVSLDYLVEDLFLYKKIDDFNHEFKAYFKNHGKTYEYVKKYTFSEKNE 167

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           + +  TV  NS+D                         +        + +         K
Sbjct: 168 YLMKFTVIVNSLDDYNLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGK 227

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
             +S    +  W+G S KY+  +       +   +FK        +          +   
Sbjct: 228 DGLS--IHNPRWIGSSTKYFEVLV---SRENMEVEFKKERGILKSFIVN------NVRNK 276

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLMSYF 353
           K+I+   F++AG K+   +  ++K            F M ++   +Y I  PM M+M  F
Sbjct: 277 KNISDEFFIYAGPKDNRYLDIFDKSGDNTFGLSDIAFGMSVEKSLWYLIQVPMQMVMQVF 336

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           Y ++ N+G++I+  T+ V++L FPL  K + +TA +  +QPK+ EL+ KF +  P+ L +
Sbjct: 337 YGVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKF-KHDPKKLNE 395

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472
            M +LYK   +NPL GC+PI+LQ+P+FFA+Y +++    +R A F  GWI DL+  D   
Sbjct: 396 EMGRLYKEEGVNPLGGCFPIILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVY 455

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVFV 528
            F        Y   +  + I P IM  +      +S     K    Q   L + MP++F 
Sbjct: 456 HFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNLDLKNLGAQQKFLYFGMPIMFF 511

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556
           F L + P+GL+IYW  +N+ +I+QQ  I
Sbjct: 512 FILYNMPSGLLIYWITTNIFTILQQYYI 539


>gi|225620456|ref|YP_002721713.1| putative inner membrane protein [Brachyspira hyodysenteriae WA1]
 gi|225215275|gb|ACN84009.1| putative inner membrane protein [Brachyspira hyodysenteriae WA1]
          Length = 624

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 112/615 (18%), Positives = 231/615 (37%), Gaps = 60/615 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE----------RKNIQTVKQPNQVD 50
           M  N    +AI LS II++ +  +         N+             NI +        
Sbjct: 1   MSNNKRMVIAIGLSAIIMFLYMFYQAKTMKPVYNSNVSTNSNAVSNNNNITSENILLNTA 60

Query: 51  NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY-HLDVSSNSPIVT 109
                  I++    ++ + ++ L+N  +I +   K        L+ Y   D+ +++    
Sbjct: 61  QMQKIEKIENTNAVINDNEKI-LENEYVIATF--KNGSLYSYKLKNYYPQDLGADATNEI 117

Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169
           +          +         +N      N  + LI       +     +  N    + +
Sbjct: 118 IDMVEQVYEGIYPFTVTFQNLSNSIAIPENLDYQLIEESGDKVSYSANAIIDNTEVKITK 177

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
                ++ Y  K    + N     +       +        T+   ++E           
Sbjct: 178 TFTFGEDPYQLKNSVNIENVGEKDLSLFYSYFLATGIGPYRTDKNAIREDATKAQYLIKG 237

Query: 230 VEQ-------------------------KYSDIEKSSISNFHESNSWLGISDKYWASVFI 264
             +                         K     +   + +   + W+ ++++Y+A +  
Sbjct: 238 NGKSKILLTGDIVKDNIFSRLFGFGNSSKGIKTNQMRYAIYEGEDKWVALNNRYFAIISS 297

Query: 265 PSKETSFHSQFK-----YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319
           P++  +   +         ++    +      ++ TI  G SIT    +F G K   T  
Sbjct: 298 PAQSNNTVFETMTFSKPSTNEYRNDFHVANLMSKHTIKSGSSITDNYSVFMGPKVRRTFS 357

Query: 320 HY-EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378
            Y  ++     F+          +   + ++++  YN+  N+  AI+L T   KL+ FPL
Sbjct: 358 KYYLEESYESIFQESFLGLNLRPLTYILDVILNALYNITKNYAWAILLFTFLFKLVTFPL 417

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438
               Y S   M+ + PKI+ +RE++K +P + L   ++ +YK   INPL GC P+LL  P
Sbjct: 418 NHASYKSMKKMQLVNPKIERIREQYKDNPDK-LNAEIMAIYKKEKINPLGGCLPMLLPFP 476

Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           +  A + ++   +E+R+ P + WI DL++ D   +F     +           ++PI+M+
Sbjct: 477 LLIAFFYLMQSMVELRNTP-FLWITDLSSPDKLFVFPAGIPILGGFN----FNLFPIVMA 531

Query: 499 LSMFIQMKMSPPPADKG-----QAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           L+ ++ MK+ P  +        Q  ++    P++ +    +F +GL +YW+  N+  + Q
Sbjct: 532 LTSYLSMKLQPSSSAGNSSAAAQMKMMTTIFPLMMLLMFYNFASGLALYWTAQNIFGVAQ 591

Query: 553 QAV---IMKMHGAEI 564
           Q +   I K +  EI
Sbjct: 592 QFITSKIDKSNTNEI 606


>gi|218670937|ref|ZP_03520608.1| putative inner membrane protein translocase component YidC
           [Rhizobium etli GR56]
          Length = 139

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 79/134 (58%), Positives = 106/134 (79%)

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           YKVI I++EMRHAPF+GWI+DL+A DPT I  LFG+LPF  P  +H+G+WP+IM ++MF+
Sbjct: 1   YKVIYITIEMRHAPFFGWIQDLSAPDPTTIVNLFGLLPFEAPALLHLGVWPLIMGVTMFV 60

Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           QM+M+P P D  QAMI NWMP+VF F L+SFPAGL+IYW+W+N +S++QQ+VIM+ HG  
Sbjct: 61  QMRMNPTPPDPTQAMIFNWMPLVFTFMLASFPAGLVIYWAWNNTLSVLQQSVIMRRHGVR 120

Query: 564 IGLIDRLRSTFSKN 577
           I L D L+  F + 
Sbjct: 121 IELFDNLKGLFRRK 134


>gi|224532140|ref|ZP_03672772.1| inner membrane protein OxaA [Borrelia valaisiana VS116]
 gi|224511605|gb|EEF82011.1| inner membrane protein OxaA [Borrelia valaisiana VS116]
          Length = 544

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 117/571 (20%), Positives = 229/571 (40%), Gaps = 47/571 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQN--FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
           M ++      + LS+ ++  +       +PR+  +    K +Q        D+    +  
Sbjct: 1   MNQSKRILRTVYLSLFLIGLFMLINDIFFPRMLNLKPSDKEVQ-FDLNKSFDDDEMFLSK 59

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
            +    +  S  + ++    + + +        L L+ +   ++       L++      
Sbjct: 60  SNNINLIDKSQDIVVETGIYVATFSTFRGNLVSLKLKNH---LNLEKDPTDLINVDYKNE 116

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            +F         +         ++                          +R I   ++ 
Sbjct: 117 TFFDVSFDYLVED---------LFLYKKIDDFNHEFKAYFKNNGKTYEYIKRYIFSKKNE 167

Query: 179 LFKIVDTVTNNSIDQIRFSPRGR--IMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
                    N+  D   F       I   + +  ++   +Q             + KY  
Sbjct: 168 YLMKFKVTVNDLEDYNLFDIDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGK 227

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
                      +  W+G S KY+  +     + +   +F+   +    +      N    
Sbjct: 228 DGLK-----INNPRWIGSSTKYFEVLIF---KENMEVEFRKEKEILKSFIVNNVGN---- 275

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350
              K+I+   F++AG K+   +  ++K+           F M ++   ++ I  PM M+M
Sbjct: 276 --KKNISDEFFIYAGPKDNRYLDIFDKNGDNTFGLSDIAFGMSVEKSLWHLIQVPMQMVM 333

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
             FY+++ N+G++I+  T+ V++L FPL  K + +TA +  +QPK+ EL+ KF +  P+ 
Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKF-KHDPKK 392

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469
           L + M +LYK   +NPL GC+P++LQ+P+FFA+Y +++    +R A F  GWI DL+  D
Sbjct: 393 LNEEMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525
               F        Y   +  + I P IM  +      +S     K    Q   L + MP+
Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNIDLKNLGAQQKFLYFGMPI 508

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F F L + P+GL++YW  +N+ +I+QQ  I
Sbjct: 509 MFFFILYNMPSGLLVYWITTNIFTILQQYYI 539


>gi|299137229|ref|ZP_07030411.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp.
           MP5ACTX8]
 gi|298600634|gb|EFI56790.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp.
           MP5ACTX8]
          Length = 561

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 106/565 (18%), Positives = 212/565 (37%), Gaps = 55/565 (9%)

Query: 3   RNWNYFVAIALSVII-VYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
           +N +  +A++L   + +   Q F     +E  +       +   P   +   AA   +  
Sbjct: 14  QNVHTILALSLVFFLALLGVQAFQQKKPVESKSKP----SSTVIPAAPNTLVAAAQANQE 69

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
           +   S    + ++N       + +G Q     L+ Y     S  P+  +   + + + Y 
Sbjct: 70  SMKASSESEIIVENKFYRIRFSNRGGQVLSWILKQY--TDDSGKPLDLVNQRAASLHGY- 126

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181
             L   +    +    +  ++   S   L     +   +      +  +T + D+ Y+  
Sbjct: 127 -PLSLYTQKAGLTKQLAEALYEPSSSGRLVAPGKLTFTYSEGGVSVI-KTFTFDQSYIVG 184

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
               VT++            +          T              +      +    ++
Sbjct: 185 ADILVTDHG-----MPVAASLCWPSGLGDQETLQNYNVDGRFDASLNGKFVSQTVKSITT 239

Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHS-------QFKYLSDGHARYQAKFSANEI 294
                 S  + G+SD Y+A++F+P   T                +       +   +   
Sbjct: 240 GVVQAGSYDYAGVSDLYFAAIFLPEHSTKTTVLNLRNEISIPRTNGQTHSALSDVVSVPG 299

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEK-----DLAIPRFEMLIDWGWFYFIAKPMFML 349
             +          LFAG K    +           L  P  E L+ +G    +AKP+F+ 
Sbjct: 300 VAVGNGEGHIRLRLFAGPKAIELLSSVHALAPDGSLTGPDLEPLVRFGLLRIVAKPLFLA 359

Query: 350 MSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           +++ + +LV ++G AI++ T+F+ L+  P   K   S   M++IQP+I+ +R +FK    
Sbjct: 360 LNWIHVHLVHSWGWAILILTLFINLVLMPTRIKSMRSQLKMQHIQPQINAIRARFKDCKM 419

Query: 409 Q-----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                  + K +  L K   IN   G  P+LLQ+P+ +  Y+++   +E+RHA +  W+ 
Sbjct: 420 GDPHLLEMNKEIFDLQKKEGINVFGGMLPLLLQMPLLYGFYRMLQNVIELRHAEW-LWLH 478

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL-N 521
           DL++ DP +                   + P+   ++MF+   ++P    D  Q  ++  
Sbjct: 479 DLSSLDPLH-------------------VLPVFFVVTMFLLQLLTPSSGTDPVQRKMMAL 519

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSN 546
            +PV+  F      AGL +YWS+ N
Sbjct: 520 VLPVLGFFMTWKVGAGLALYWSFGN 544


>gi|300776109|ref|ZP_07085968.1| inner membrane protein OxaA [Chryseobacterium gleum ATCC 35910]
 gi|300505242|gb|EFK36381.1| inner membrane protein OxaA [Chryseobacterium gleum ATCC 35910]
          Length = 599

 Score =  189 bits (480), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 105/593 (17%), Positives = 226/593 (38%), Gaps = 35/593 (5%)

Query: 1   MERN----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M++N        ++ A+  ++++ +  ++   + +E   + +  +T +  N V  + A  
Sbjct: 1   MQQNNGIDKKQMISFAVLCLVLFGFMFYFQNKQAKEAELKAQEQKTEQAKNAVKQTQATN 60

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL---DVSSNSPIVTLLSP 113
           +  +       +    L N  L    +  G Q   + L  Y        +    + L++ 
Sbjct: 61  INPNVTPNAIQTA--SLGNNELKLEFSSLGGQVSKVELLKYKAYNHKTDNADQPLYLITK 118

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
           +N+   +  +     T N  +L  S                    +  + N  + +   +
Sbjct: 119 NNSNYGFQFKDKTGKTVNTKDLVFS-----------PAVNGNAVTLTADYNGAVIQFIYT 167

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
           L   Y           S              +           Q          +  +  
Sbjct: 168 LLPKYTLDFKVRTQGLSKITSDNKADFIWDYNVRNLEKGRAQEQSHSEFSYAFNNYKDYD 227

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
           Y            E+ +W+G+  ++++SV       +  S+    +     Y  KF+   
Sbjct: 228 YDGRTTMDEEK--ETLNWIGVKQQFFSSVIEAKNGFT-QSKGNQENVEEGEYLKKFNYEG 284

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
              + G  +      +    + P +  Y+K+     F+ ++  GW +  A   +  M  +
Sbjct: 285 FVQMTGSELNQDFTWYFMPLDLPLLKSYDKN-----FDEILPLGWSFIGAMNRYFFMWLY 339

Query: 354 YN---LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
                   + G  I + T+ VKL+  P+  KQ+  +A MK I+P+IDE+  KFK + P  
Sbjct: 340 SIIAAWGLSAGWVIFVMTIIVKLILSPIMYKQHKLSAMMKVIRPEIDEVNAKFKDADPMK 399

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
            Q+A +++Y+   +N +AGC P L+QIP+F+A+++     +++R    + + KDL A D 
Sbjct: 400 KQQATMEVYRKAGVNQMAGCLPALVQIPIFYALFRFFPNFIDLRGQG-FWFAKDLTAYDD 458

Query: 471 TNI--FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528
                F +  +        +   I  +I ++     M+           +++   P+ F+
Sbjct: 459 LIKLPFKVPFLGDHLSIFALACTIVILIYTVMTSGNMQQPQQEGMPNMKVLMYIFPITFL 518

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           F L++  +GL  Y+  SN I+I+   VI  +   E  +  +++S   +   ++
Sbjct: 519 FFLNTSASGLSWYYFVSNAINILIILVIKYVILDEKKIHAQIQSN-KEKPKAE 570


>gi|291514659|emb|CBK63869.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
           [Alistipes shahii WAL 8301]
          Length = 648

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 109/625 (17%), Positives = 231/625 (36%), Gaps = 61/625 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN------------- 47
           M+      + IA+  ++   +  F    + E +  +      V                 
Sbjct: 1   MD--KKSIIGIAVVAVLFLGFAYFNSQQQKEYLEQKAAYEAYVDSVAAAARAAAPVADSL 58

Query: 48  QVDNSYAAVLIDDRAQALSMSPRVE------------------LKNPSLIGSINLKGAQF 89
              N   A +    A A     +VE                  ++N  +    + +G Q 
Sbjct: 59  ASGNGVQAEVAAAEAAAAVRERQVETLGESLTAAREAEAEEFIVENDVMAVLFSTRGGQI 118

Query: 90  DDLNLRGYHLDV--SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147
             + L+ Y            + ++ P+  +      L        +   +       + G
Sbjct: 119 KGVTLKDYTQYGPRGKRDRKIEMMDPATARFGLSFYLKNGLKNVPVNTLDYVFTAQPVVG 178

Query: 148 KILTPTTP-IKLVFKNANNILFERTIS----LDEHYLFKIVDTVTNNSIDQIRFSPRGRI 202
           +     +  ++L       + +   I      +  YL      + N + +    +     
Sbjct: 179 EADGAKSVVMRLPVAEGAYLEYRYLIYDTAAPERDYLVDFDVRLVNMAPEMANQTQIQID 238

Query: 203 MRHKPQTATNTFGVQEGFIAVLGDKSLVE--QKYSDIEKSSISNFHESNSWLGISDKYWA 260
             +        F  +  +  +          ++    E +   N     +W+    ++++
Sbjct: 239 WANTTFQNEKGFQNENMYTTLSYRFPDETSIEELGMSEGAKSKNISTQVNWVAFKQQFFS 298

Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320
           SVFI     S+ +     +   +     F+A        ++       + G  ++  +  
Sbjct: 299 SVFIAPDNVSYANLAFDTAAPESSLLKTFTAQMGVPYTPQTEGYDFAFYFGPNKYSILKK 358

Query: 321 YEKDLA----IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
             +       + R   L    + +     +  +  +  N +G+FGI I +  + VKL+  
Sbjct: 359 IGEPGGADIYLERLVPLGWGIFGWVNRWCVIPVFDFLRNYIGSFGIIIFILVLLVKLVIS 418

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILL 435
           PL  K YVS A M+ ++P+IDEL +K+ +       Q+A ++LYK   INP+ GC P+L+
Sbjct: 419 PLTYKSYVSMAKMRLVKPQIDELAKKYPKPEDAMKKQQATMELYKKAGINPMGGCIPMLI 478

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           Q+P+  A+++    S+E+R  P + W  DL++ D  +I  L   +PFY     HV ++ +
Sbjct: 479 QMPILIAMFRFFPASIELREQP-FLWADDLSSYD--SIVNLPFSIPFYG---DHVSLFAL 532

Query: 496 IMSLSMFIQMKMSPPPADKGQAMI--LNWMPVVF-----VFALSSFPAGLIIYWSWSNVI 548
           +M++S+F     +       Q  +  + +M V       +F  +S+ +GL  Y+  SN+ 
Sbjct: 533 LMAVSLFGYSWFNYQQTASSQPQMAGMKFMMVYMMPIMMLFWFNSYSSGLCYYYLLSNIF 592

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRST 573
           +I Q  VI +    +  +   +++ 
Sbjct: 593 TIGQTLVI-RRMVDDNKIHAIMQAN 616


>gi|219685168|ref|ZP_03539988.1| inner membrane protein OxaA [Borrelia garinii Far04]
 gi|219673264|gb|EED30283.1| inner membrane protein OxaA [Borrelia garinii Far04]
          Length = 544

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 114/568 (20%), Positives = 223/568 (39%), Gaps = 41/568 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M ++      + LS+ ++  +           ++ +  + +     NQ  +     L   
Sbjct: 1   MNQSKRILRTVYLSLFLIGLFMLINDIFSSSMLSFKSSDKEVQFDLNQSFDDNEMFLSKS 60

Query: 61  RA-QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
            +   ++ S  + ++      + +        L L+ +   ++       L++       
Sbjct: 61  NSFDLINKSQNIVVETEIYFATFSTFRGNLVSLKLKKH---LNLEKDPTDLINVDYKNET 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F         +         ++                          ++    +++  
Sbjct: 118 FFDVSLDYLVED---------LFLYKKIDDFNHEFKAYFKNHGKTYEYIKKYTFSEKNEY 168

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
                 + NN  D   F      +    +         +  +      S +    + ++ 
Sbjct: 169 LMKFTVIVNNLDDYNLFDIDSYKIVFSSEIER---LSDKAKLQYNNYLSQIIYYDNKLKY 225

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
                   +  W+G S KY+  +       +   +FK        +      N       
Sbjct: 226 GKDGLSIHNPRWIGSSTKYFEVLV---SRENMEVEFKKERGILKSFIVNNVGN------K 276

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLMSYF 353
           K+I+   F++AG K+   +  ++K            F M ++   +Y I  PM M+M  F
Sbjct: 277 KNISDEFFIYAGPKDNRYLDIFDKSGDNTFGLSDIAFGMSVEKSLWYLIQVPMQMVMQVF 336

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           Y ++ N+G++I+  T+ V++L FPL  K + +TA +  +QPK+ EL+ KF +  P+ L +
Sbjct: 337 YGVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKF-KHDPKKLNE 395

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472
            M +LYK   +NPL GC+P++LQ+P+FFA+Y +++    +R A F  GWI DL+  D   
Sbjct: 396 EMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVY 455

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVFV 528
            F        Y   +  + I P IM  +      +S     K    Q   L + MP++F 
Sbjct: 456 HFGYK----LYFVSWTDIRILPFIMMFTQLGSTIISSNLDLKNLGAQQKFLYFGMPIMFF 511

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556
           F L + P+GL+IYW  +N+ +I+QQ  I
Sbjct: 512 FILYNMPSGLLIYWITTNIFTILQQYYI 539


>gi|288818681|ref|YP_003433029.1| inner membrane protein [Hydrogenobacter thermophilus TK-6]
 gi|288788081|dbj|BAI69828.1| inner membrane protein [Hydrogenobacter thermophilus TK-6]
 gi|308752269|gb|ADO45752.1| membrane protein insertase, YidC/Oxa1 family [Hydrogenobacter
           thermophilus TK-6]
          Length = 501

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 116/563 (20%), Positives = 222/563 (39%), Gaps = 89/563 (15%)

Query: 1   MERN----WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53
           ME+N       F  + +  ++++    +  ++    I +   +R+ +Q+  Q        
Sbjct: 1   MEKNEIDVKRLFALMLVVTLLMFGLELYTYYFSPKEIPQKAVKREEVQSFPQ-------- 52

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
             +++    ++                 ++L+G +   L  + Y  D+ +++        
Sbjct: 53  --LMLGSMRESKKPVQIQAFDFRQFTLLVSLEGGKIVKLVDKKYSYDLITDTERKL---- 106

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
               N Y  E+   +   + +L  +                 I + + + +  L +R   
Sbjct: 107 ----NVYPLEVYTGNPDLDQKLNFAPYQITREGD-------SIVMTYTDGSISLTKRLTY 155

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
            + ++   I                            ++       ++ V       E  
Sbjct: 156 EEGYFKLSI----------------------------SSKGLPSPLYVVVGSHPKGDEFY 187

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
                  SI    E      I  + + S  I          FK                +
Sbjct: 188 THSGPVLSIGGKVERLDVGSIKGREFLSGDISFAGEESRYYFKGFVGKIPSVLIYKVGED 247

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
              L    ++     +AGAKE+  +              +ID+G    + KP+F+ M + 
Sbjct: 248 KDSLTLVEVSNPLIFYAGAKEYSRLKKI-------GLSDVIDYGTLKILVKPLFIFMYWI 300

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           Y  + ++  +I+  T+ V++  FPL  K  +S   +  + PK+ E+REK+K+ P ++ Q+
Sbjct: 301 YEHLRSWVFSILALTLLVRVFMFPLTYKSTISMMKLSELAPKVQEIREKYKEDPTKM-QE 359

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            M++LY     NP++GC P++LQIPVFFA+YKV++I+ +++ A    WI  L+  DP   
Sbjct: 360 EMMKLYSQVGFNPMSGCLPMILQIPVFFALYKVLTITADLQLAS-MLWIPSLSHKDPYY- 417

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533
                             I PIIM L+M  Q  +SP P DK Q  ++    V F F  +S
Sbjct: 418 ------------------ILPIIMGLTMIAQQFISPNP-DKTQNFMMYVSSVAFTFLFAS 458

Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556
           FPAGL++YW+++N+ ++ Q  +I
Sbjct: 459 FPAGLVLYWTFNNIFNMGQSYLI 481


>gi|225552387|ref|ZP_03773327.1| inner membrane protein OxaA [Borrelia sp. SV1]
 gi|225371385|gb|EEH00815.1| inner membrane protein OxaA [Borrelia sp. SV1]
          Length = 544

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 113/571 (19%), Positives = 227/571 (39%), Gaps = 47/571 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M ++      + LS+ ++  +           +++   + +     N+  +      +  
Sbjct: 1   MNQSRKILRTVYLSLFLIGLFMLINDIFSSNILSSRSSDKEVQFDLNKSFDDNEMFSVKS 60

Query: 61  RAQA-LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
                ++ S  + ++    + + +        L L+ +   ++       L++       
Sbjct: 61  NGFNLINKSQYIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F         +            L                 N     + +  +  +   
Sbjct: 118 FFEVSFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167

Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           + +   VT N ++      F     I   + +  ++   +Q             + KY  
Sbjct: 168 YLMKFKVTVNGLEDYDLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
                      +  W+G S KY+  +     + +   +FK        +          +
Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGILKSFIVN------NV 273

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350
              K+I+   F++AG K+   +  ++             F M ++  +++ I  PM M+M
Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDNRGDNTFGLFDIFFGMSVEKSFWHLIQVPMQMVM 333

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
             FY+++ N+G++I+  T+ V++L FPL  K + +TA +  +QP++ EL+ KF +  P+ 
Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRVLIFPLTFKGFRATAELSKLQPRMKELQVKF-KHDPKK 392

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469
           L + M +LYK   +NPL GC P++LQ+P+FFA+Y +++    +R A F  GWI DL+  D
Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525
               F        Y   +  + I P IM  +      +S     K    Q   L + MP+
Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +F F L + P+GL+IYW  +N+ +I+QQ  I
Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539


>gi|51598696|ref|YP_072884.1| putative inner membrane protein translocase component YidC
           [Borrelia garinii PBi]
 gi|81691561|sp|Q661H9|OXAA_BORGA RecName: Full=Inner membrane protein oxaA
 gi|51573267|gb|AAU07292.1| inner membrane protein [Borrelia garinii PBi]
          Length = 544

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 117/568 (20%), Positives = 224/568 (39%), Gaps = 41/568 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M ++      + LS+ ++  +           ++ +  + +     N+  +     L   
Sbjct: 1   MNQSKKILRTVYLSLFLIGLFMLINDIFSSIMLSFKSSDKEVQFDLNKSFDDNEIFLSKS 60

Query: 61  RA-QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
                ++ S  + ++      + +        L L+ +   ++       L++       
Sbjct: 61  NGFDLINKSQNIVVETEIYFATFSTFRGNLVSLKLKNH---LNLEKDPTDLINVDYKNET 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F          ++ L        L                 +     + +  +  E   
Sbjct: 118 FF----------DVSLDYLVEDLFLYKKIDNLNHEFKAYFKNHGKIYEYVKKYTFSEKNE 167

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           + +  TV  NS++                         +        + +         K
Sbjct: 168 YLMKFTVIVNSLNDYDLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGK 227

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
             +S  +    W+G S KY+  +       +   +FK        +      N       
Sbjct: 228 DGLSINNPR--WIGSSTKYFEVLI---SRENMEVEFKKERGVLKSFIVNNVGN------K 276

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLMSYF 353
           K+I+   F++AG K+   +  ++K            F M ++   +Y I  PM M+M  F
Sbjct: 277 KNISDEFFIYAGPKDNRYLDIFDKSGDNTFGLSDIAFGMSVEKSLWYLIQVPMQMVMQVF 336

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           Y+++ N+G++I+  T+ V++L FPL  K + +TA +  +QPK+ EL+ KF +  P+ L +
Sbjct: 337 YDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKF-KHDPKKLNE 395

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472
            M +LYK   +NPL GC+P++LQ+P+FFA+Y +++    +R A F  GWI DL+  D   
Sbjct: 396 EMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVY 455

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVFV 528
            F        Y   +  + I P IM  +      +S     K    Q   L + MP++F 
Sbjct: 456 NFGYR----LYFVSWTDIRILPFIMMFTQLGSTIVSSNLDLKNLGAQQKFLYFGMPIMFF 511

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556
           F L + P+GL+IYW  +N+ +I+QQ  I
Sbjct: 512 FILYNMPSGLLIYWITTNIFTILQQYYI 539


>gi|224534702|ref|ZP_03675274.1| inner membrane protein OxaA [Borrelia spielmanii A14S]
 gi|224513950|gb|EEF84272.1| inner membrane protein OxaA [Borrelia spielmanii A14S]
          Length = 544

 Score =  187 bits (473), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 114/568 (20%), Positives = 220/568 (38%), Gaps = 41/568 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M ++     A+ LS+ ++  +           +++           ++  +     L   
Sbjct: 1   MNQSKRILRAVYLSLFLIGLFMLINDVFSSRMLSSNSSEKDLNFDLSKNFDDNKLFLSKS 60

Query: 61  RAQA-LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
                +  S  + ++      + +        L L+ +   ++       L++       
Sbjct: 61  NNFNLIDKSQDIVVETGIYCATFSTFRGNLVSLKLKNH---LNLEKTPTDLINVDYENEP 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F          ++          L                 N     + +  +  +   
Sbjct: 118 FF----------DVSFDYLVEDLFLYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKNE 167

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           + I   VT N ++                         +        + +         K
Sbjct: 168 YLIKFEVTVNGLEGYDLFNIDSYKIVFGSQIERLSDKAKLQYNNYLSQIIYYDNKLKYGK 227

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
             +S  +    W+G S KY+  +     + +   +FK        +      N+  I   
Sbjct: 228 DGLSINNPK--WIGSSTKYFEVLL---SKENMEIEFKKEKGILKSFIVNNVINKKNIND- 281

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLMSYF 353
                  F++AG K+   +  ++K+ A         F M ++   ++ I  PM ++M  F
Sbjct: 282 -----KFFIYAGPKDNRYLDIFDKNDANTFGLSDSAFGMSVEKSLWHLIQVPMQIVMQVF 336

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           Y+++ N+G++I+  T+ V++L FPL  K + +TA +  +QPK+ EL+ KF +  P+ L +
Sbjct: 337 YDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKF-KHDPKKLNE 395

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472
            M +LYK   +NPL GC P++LQ+P+FFA+Y +++    +R A F  GWI DL+  D   
Sbjct: 396 EMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGANFIPGWIDDLSIGDSVY 455

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVFV 528
            F        Y   +  + I P IM  +      +S     K    Q   L + MP++F 
Sbjct: 456 HFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNIDLKNLGAQQKFLYFGMPIMFF 511

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556
           F L + P+GL+IYW  +N+ +I+QQ  I
Sbjct: 512 FILYNMPSGLLIYWITTNIFTILQQYYI 539


>gi|297621235|ref|YP_003709372.1| inner membrane protein translocase component YidC [Waddlia
           chondrophila WSU 86-1044]
 gi|297376536|gb|ADI38366.1| inner membrane protein translocase component YidC [Waddlia
           chondrophila WSU 86-1044]
          Length = 822

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 112/591 (18%), Positives = 208/591 (35%), Gaps = 83/591 (14%)

Query: 51  NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR--------------G 96
            +     +    Q         L+N       +  G    ++NL                
Sbjct: 220 ATETKKPMVPELQQEVEEAYYVLENDYQQLVFSTTGGALVEINLPFETGENQKSVVKEIE 279

Query: 97  YHLDVSSNSPI------------------VTLLSPSNTKNAYFAELDYVSTANNIELPNS 138
           +  ++    P                     + +       Y+  L         +    
Sbjct: 280 FDKEIEEQHPYDARFPLQSYYTPGESPTGPFVENSKGRLGGYYPLLRRDLIQKGAKPSIQ 339

Query: 139 NTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDT----------VTN 188
               N     +        L ++  +    +      ++    I             + N
Sbjct: 340 VLPENYALNIVSKYPEIATLPYRVTHFDKNKIVFEASQNNRKIIKTYSFDEQKNAPYIVN 399

Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES 248
            SI     S    +    P     +          L  +  VE    D  K S++     
Sbjct: 400 LSITVEGDSRGLWLTTGVPDVEWISNAPAPALKYRLTRQGKVEVNNLDKPKDSLTMSTVV 459

Query: 249 NSWLGISDKYWASVFIPS------------KETSFHSQFKYLSDGHARYQAKFSANEITI 296
             W+  S+ ++  +  P                   S+   + + + R+QA      + +
Sbjct: 460 PDWICNSNGFFGIILDPLSPIDDGLRVLHIDGEEMPSRLVLVGEEYDRFQASKLPGYLMM 519

Query: 297 LPGKS--ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG-----------WFYFIA 343
           LP  S   T    +FAG     T+   +   + P      D+                 +
Sbjct: 520 LPLNSKGGTMNFRIFAGPFGDKTLTTVDHLYSNPETGYNPDYKGSQTFHGWFSFISAPFS 579

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
           K +F+LM +F++L G++GI+I+L T+ ++++ +PL      S   M+ +QP++  ++EK 
Sbjct: 580 KFLFVLMKFFHHLTGSWGISIILLTIALRVMLYPLNAWSTKSMLKMQQLQPEVQAIQEKH 639

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWI 462
            +  P+  Q  +  LY +  +NP++GC+P+L+Q+P    ++ ++  + E+R APF  GWI
Sbjct: 640 -KKDPKKAQLEVTNLYMSRGVNPISGCFPMLIQLPFLIGMFDLLKSTFELRGAPFIPGWI 698

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPADK------- 514
            +LAA D    +     + F    F    + PI++ + MFIQ + MS  P D        
Sbjct: 699 DNLAAPDVLFSWKTP--IFFIGNQF---HLLPILLGVVMFIQQRTMSNAPKDPNLMTEQQ 753

Query: 515 -GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
             Q  +   M  VF      FP+GL IYW  S ++ I+QQ    +   A  
Sbjct: 754 RQQRTMGTMMTAVFSVMFYHFPSGLNIYWLSSMLLGILQQWWTQRKFKANP 804


>gi|115372258|ref|ZP_01459568.1| inner membrane protein, 60 kDa [Stigmatella aurantiaca DW4/3-1]
 gi|115370723|gb|EAU69648.1| inner membrane protein, 60 kDa [Stigmatella aurantiaca DW4/3-1]
          Length = 461

 Score =  185 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 101/425 (23%), Positives = 174/425 (40%), Gaps = 38/425 (8%)

Query: 149 ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208
                  +    +     + +R    +  +       V N S   +    R    R    
Sbjct: 33  QEAGEGTVVFTTRRGPWEVVKRVQWPNAGHELTYTVQVHNTSSQPLTGELRVHHNRAIDP 92

Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI--SNFHESNSWLGISDKYWASVFIPS 266
              +      G          V +K             F     + GI  +Y+ S+  P 
Sbjct: 93  NFEHAPSFFGGVGNQSRAACHVGEKLHKRVPEDEASETFSGPVHYFGIDQQYFLSMLYPL 152

Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH------- 319
           +           +    +    F    +T+  G+++T     + G K+   +        
Sbjct: 153 EAPREGHCVLTATPTVRQVAVGF---PLTVGAGETVTVRFGGWFGPKDPDLLKPVPSQEV 209

Query: 320 ----HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375
                       P  E  +D+G +  I K +   M +F+ + GN+G+AI+L TV VKL+ 
Sbjct: 210 LSAAGMTAAAWDPTIEETVDFGIWAVICKLLLFFMKWFHAVTGNWGVAIILLTVLVKLVL 269

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435
            PL  K  V    +K +QPK++E+R+KF +   + +   +++LY+   +NPL GC P+L+
Sbjct: 270 LPLTYKSMVGMEAVKELQPKMEEIRKKFAE-DRERMNMEVMKLYQQAKVNPLGGCLPLLI 328

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGW-IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           Q+PV+ A++  +  S ++   PF+G   +DL   DPT                    + P
Sbjct: 329 QMPVWIALFTALRNSFDIYWEPFFGPVWRDLTYKDPTY-------------------LLP 369

Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
           + + +SM I  KM P   D  QA I+ W MP++F   L  +PAGL +Y   +N++SI QQ
Sbjct: 370 LALGVSMIITQKMQPQMMDAAQARIMIWVMPIIFTLTLLQYPAGLSLYIFTNNLLSIGQQ 429

Query: 554 AVIMK 558
             + K
Sbjct: 430 WGLRK 434


>gi|111115269|ref|YP_709887.1| putative inner membrane protein translocase component YidC
           [Borrelia afzelii PKo]
 gi|216263402|ref|ZP_03435397.1| inner membrane protein OxaA [Borrelia afzelii ACA-1]
 gi|122956367|sp|Q0SN67|OXAA_BORAP RecName: Full=Inner membrane protein oxaA
 gi|110890543|gb|ABH01711.1| inner membrane protein [Borrelia afzelii PKo]
 gi|215980246|gb|EEC21067.1| inner membrane protein OxaA [Borrelia afzelii ACA-1]
          Length = 544

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 111/568 (19%), Positives = 226/568 (39%), Gaps = 41/568 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFY-VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           M ++      + LS+ ++  +     ++      +               D++   +   
Sbjct: 1   MNQSKRILRTVYLSLFLIGLFMLINDIFSSWMLGSKSSDKELQFDLNKSFDDNKMLLSKS 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
           +    +  +  + ++      + +        L L+ +   ++       L++       
Sbjct: 61  NNFNLIDKAQDIIVETGIYFATFSTFRGNLVSLKLKNH---LNLEKDPTDLINVDYKNEP 117

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +F          ++          L                 N     + +  +  +   
Sbjct: 118 FF----------DVSFDYLVEDLFLYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKNE 167

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
           + +   V  N ++    +           ++       +  +      S +    + ++ 
Sbjct: 168 YLMRFEVIVNGLEDY--NLLDIDSYKITFSSQIERLSDKAKLQYNNYLSQIIYYDNKLKY 225

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299
                   +  W+G S KY+  +     + +   +FK        +          ++  
Sbjct: 226 GKDDLRINNPKWIGSSTKYFEVLV---SKENMEVEFKKEKGILKSFIVN------NVINK 276

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLMSYF 353
           K+I+   F++AG K+   +  ++K+           F M ++   +Y I  PM M+M  F
Sbjct: 277 KNISDKFFIYAGPKDNRYLDIFDKNSDNTFGLSDIAFGMSVEKSLWYLIQVPMQMVMQVF 336

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           Y+++ N+G++I+  T+ V++L FPL  K + +TA +  +QPK+ EL+ KF +  P+ L +
Sbjct: 337 YDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKF-KHDPKKLNE 395

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472
            M +LYK   +NPL GC+PI+LQ+P+FFA+Y +++    +R A F  GWI DL+  D   
Sbjct: 396 EMGRLYKEEGVNPLGGCFPIILQLPIFFALYSLVNNLFLLRGANFIPGWIDDLSIGDSVY 455

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVFV 528
            F        Y   +  + I P IM  +      +S     K    Q   L + MP++F 
Sbjct: 456 HFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNIDLKNLGAQQKFLYFGMPIMFF 511

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556
           F L + P+GL+IYW  +N+ +I+QQ  I
Sbjct: 512 FILYNMPSGLLIYWITTNIFTILQQYYI 539


>gi|228470855|ref|ZP_04055702.1| putative membrane protein [Porphyromonas uenonis 60-3]
 gi|228307422|gb|EEK16432.1| putative membrane protein [Porphyromonas uenonis 60-3]
          Length = 626

 Score =  184 bits (465), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 99/573 (17%), Positives = 213/573 (37%), Gaps = 37/573 (6%)

Query: 26  VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM-----SPRVELKNPSLIG 80
             P  +             +  Q  +  A     D   A S      +    + N  L  
Sbjct: 33  PTPATDTTQVATNAATAPAEEGQTTSDAAKPAPVDSLYAFSQLMAQSAKEYTMSNDKLSV 92

Query: 81  SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140
           +   +GA      L  Y    S +S  V L +P +     F     + T  N  L   + 
Sbjct: 93  TFTTQGAMPVSAELADYK---SYDSTQVRLFAPGD-----FVLNLPIRTNQNQILETKDL 144

Query: 141 VWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY-LFKIVDTVTNNSIDQIRFSPR 199
           +W   + +    T  + L   +++ +    T+  + +     I      + +        
Sbjct: 145 IWQ--ASQPNDSTLQMTLPIDSSSYLRIIYTMPHEGYMLGMAIEAQGLGSLLHSNNAMQD 202

Query: 200 GRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYW 259
             +    P+   +     +             +K  + + +   +  E   W+ + DK++
Sbjct: 203 LEMSLRIPRQELSWKFENQYSTIYYKYPGDDVEKLKETKMTQEKDVREKIQWVAMKDKFF 262

Query: 260 ASVFIPSKE---TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFP 316
           ++V I   +         F          +         +           LF G  ++ 
Sbjct: 263 STVLIGLGDTRLEENKMSFTTEPKETNYIKDCKYQGAFAMDIRDGRKANFALFMGPLDYN 322

Query: 317 TIHHYEKDLAIPRFEMLIDWGWF------YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370
            +   +  +   +   L    +       +     +  L+++    + N+GI I+L T+ 
Sbjct: 323 MLKSIDAGVDKAQRLDLKRMIYVGGSLFRWINVTLIRPLINFLQGFISNWGIIILLLTII 382

Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ---KAMIQLYKTHNINPL 427
           +KL+  PL  K Y+S A M+ ++P+++ +  K+     Q++    +A +QLY+    +P+
Sbjct: 383 IKLVLSPLTFKSYLSQAKMRVLKPQVEAINAKYAGDDQQMMMKRSQATMQLYRNAGASPM 442

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487
           +GC P+LLQ+P   A+Y     ++++R    + W+KDL+  DP   ++        L G 
Sbjct: 443 SGCLPMLLQMPFLIALYMFFPTAIDLRGES-FLWVKDLSTYDPIISWSTDIPFITGLLGG 501

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPVVFVFALSSF----PAGLII 540
            H+ ++ ++ +++  I  + +      A   Q  ++ +MP +       F     AGL  
Sbjct: 502 NHISLFCLLWAVTNIIYSRYTMSMSGGASGSQMKMMRFMPYMMTIMFFIFFNSNAAGLTY 561

Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           Y+  S +I+I+Q  +  ++   E  ++ RL+  
Sbjct: 562 YYFISTLITILQ-FLASRLLINEDKVLARLQEN 593


>gi|296126151|ref|YP_003633403.1| membrane protein insertase, YidC/Oxa1 family [Brachyspira murdochii
           DSM 12563]
 gi|296017967|gb|ADG71204.1| membrane protein insertase, YidC/Oxa1 family [Brachyspira murdochii
           DSM 12563]
          Length = 626

 Score =  183 bits (464), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 114/608 (18%), Positives = 224/608 (36%), Gaps = 58/608 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV----------- 49
           M  N    +A AL+ II++ +  +         ++           N +           
Sbjct: 1   MSNNKRMVIAFALTAIILFIYMFYQSKVMKPVYSSNTSTNSAAASNNNIENNNNTANYLL 60

Query: 50  -DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY-HLDVSSNSPI 107
                    + +    LS++    L+N  +I +   K        L+ Y   D+  ++  
Sbjct: 61  DTAQMQNFAVIEDTNTLSLNNEKILENEYVIAAF--KNGSLFSYKLKNYYPQDLGKDATN 118

Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167
             +          +         +N      N  + LIS       +   L   +   + 
Sbjct: 119 EIIDMVEQVYEGIYPFTVTFQNLSNSIAMPENLNYQLISNDNNDLVSYSALALIDNVPVR 178

Query: 168 FERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
             +T S  ++ Y  K   T+ N     +       +        T+   V+E        
Sbjct: 179 ITKTFSFGEDPYQLKNSVTIENIGEKDLSLFYSYFLGTGIGPYRTDKNSVREDATKAQYL 238

Query: 227 KSLVEQK-----------------------YSDIEKSSISNFHESNSWLGISDKYW---A 260
                +                             +   S +   + W  ++++Y+   +
Sbjct: 239 IKGNGKSKILLTGDIVKDNIFSRLFGSSSRGIKTNQMRYSVYEGLDKWAALNNRYFAIIS 298

Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSA--NEITILPGKSITTTNFLFAGAKEFPTI 318
           S   P         F   S    R     +   ++ +I  G SIT T  +F G K     
Sbjct: 299 SSAQPDNTVFETMTFSKPSTNEYRNDFHLANLVSKHSIKSGSSITDTYSVFMGPKVRRLF 358

Query: 319 HHYEKDLAIPR-FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
             Y  + +    F+          +   + ++++  YN+  N+  AI+L T+  K++ FP
Sbjct: 359 SKYYAEESYESIFQESFLGINLRPLTYILDIMLNGLYNITKNYAWAILLFTLLFKIITFP 418

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437
           L    Y S   M+ + PKI+ +RE++K +P + L   ++ +YK   INPL GC P+LL  
Sbjct: 419 LNNASYKSMKKMQLVNPKIERIREQYKDNPDK-LNAEIMAIYKKEKINPLGGCLPMLLPF 477

Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
           P+  A + ++   +E+R+ P + WI DL++ D   +F     +           ++PI+M
Sbjct: 478 PLLIAFFYLMQSMVELRNTP-FLWITDLSSPDRLFVFPAGMPILGGFN----FNLFPILM 532

Query: 498 SLSMFIQMKMSPPPADKG------QAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           +++ ++ MK+ P  +  G      Q  ++    P++ +    +F +GL +YW+  NV  +
Sbjct: 533 AVTSYLSMKLQPSSSAGGSSSAAAQMKMMTTIFPLIMLLMFYNFASGLALYWTAQNVFGV 592

Query: 551 VQQAVIMK 558
            QQ +  K
Sbjct: 593 AQQFITSK 600


>gi|327540380|gb|EGF26966.1| 60 kDa inner membrane insertion protein [Rhodopirellula baltica
           WH47]
          Length = 822

 Score =  183 bits (464), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 96/424 (22%), Positives = 177/424 (41%), Gaps = 36/424 (8%)

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
           E    ++      +     +N I         R + +K     +        +    ++S
Sbjct: 337 ELAYRIEGANGITLEGWWYSNKISPNWGGSAARDIVYKTTAEGHELVSGYALLKRAKNES 396

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY----------- 277
             E     +     +    + S++G+  +Y+    +P +       F+            
Sbjct: 397 --EADDQTLFAPDSAPPARNLSYIGVDAQYFTVAMLPPEGQESLKTFRRAAANIIADPSA 454

Query: 278 ---LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
                +          +    + PG S+  +  LFAG K+   +  Y            I
Sbjct: 455 VPDNKERAVNASFYLDSAIADVPPGSSLKQSLRLFAGPKQPDVMEAY-------GLGDCI 507

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            +GWF F+AKP+  L+  F N VGN+ +AI+L T+ V+ L FPL++K  ++   M+ + P
Sbjct: 508 YYGWFSFVAKPLGGLLHLFSN-VGNYALAIVLLTLCVRGLMFPLSRKAAINAQRMQELAP 566

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           ++ ++ EK K    +   +A  +L +    NP+AGC P+ LQ+P+F  +Y+ +S+ +E+R
Sbjct: 567 ELKKIAEKHKD-DMEARVRAQRELQQRVGFNPMAGCAPMFLQLPIFIGLYRTLSVDIELR 625

Query: 455 HA---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG----IWPIIMSLSMFIQMKM 507
            A    +  W  +LAA D    +  +        G   +G    I P+I+      Q KM
Sbjct: 626 QAAFASWTAWASNLAAPDMMYYWGDWMWDYLGGRGTGWLGPYFNILPMIVVSLFLAQQKM 685

Query: 508 SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             PPA   Q      ++N+M +V        PAGL IY+  S++  I ++ ++ K   ++
Sbjct: 686 FMPPATDEQTAMTQKMMNYMTLVMGLFFFRVPAGLCIYFITSSLWGIGERILVKKTLPSK 745

Query: 564 IGLI 567
               
Sbjct: 746 PHFD 749



 Score = 40.7 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 35/121 (28%), Gaps = 23/121 (19%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNF---YVYP-RIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           ME     F  I  S+     + +    +  P   EE      + +TV+    +     A 
Sbjct: 1   ME--RRLFSFILSSMAFFLIYMSLRTMFAPPLPPEEDAIAEVDGETVEPVEDLVADTDAS 58

Query: 57  LIDDRAQALSMSPRVELKNP-----------------SLIGSINLKGAQFDDLNLRGYHL 99
              +     +      ++ P                  ++ ++N +G   + + L     
Sbjct: 59  EPGEGDGEEANEDTDAVERPSSPTWSTLGSMDPTSGYVMLVTLNSRGGGIERIELTERKE 118

Query: 100 D 100
           +
Sbjct: 119 N 119


>gi|32475265|ref|NP_868259.1| 60 kDa inner-membrane protein homolog- part of a protein secretion
           system [Rhodopirellula baltica SH 1]
 gi|38502913|sp|Q7UFZ2|OXAA_RHOBA RecName: Full=Inner membrane protein oxaA
 gi|32445806|emb|CAD78537.1| 60 kDa inner-membrane protein homolog-putative part of a protein
           secretion system [Rhodopirellula baltica SH 1]
          Length = 827

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 96/424 (22%), Positives = 177/424 (41%), Gaps = 36/424 (8%)

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
           E    ++      +     +N I         R + +K     +        +    ++S
Sbjct: 342 ELAYRIEGANGITLEGWWYSNKISPNWGGSAARDIVYKTTAEGHELVSGYALLKRAKNES 401

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY----------- 277
             E     +     +    + S++G+  +Y+    +P +       F+            
Sbjct: 402 --EADDQTLFAPDSAPPARNLSYIGVDAQYFTVAMLPPEGQESLKTFRRAAANIIADPSA 459

Query: 278 ---LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
                +          +    + PG S+  +  LFAG K+   +  Y            I
Sbjct: 460 VPDNKERAVNASFYLDSAIADVPPGSSLKQSLRLFAGPKQPDVMEAY-------GLGDCI 512

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            +GWF F+AKP+  L+  F N VGN+ +AI+L T+ V+ L FPL++K  ++   M+ + P
Sbjct: 513 YYGWFSFVAKPLGGLLHLFSN-VGNYALAIVLLTLCVRGLMFPLSRKAAINAQRMQELAP 571

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           ++ ++ EK K    +   +A  +L +    NP+AGC P+ LQ+P+F  +Y+ +S+ +E+R
Sbjct: 572 ELKKIAEKHKD-DMEARVRAQRELQQRVGFNPMAGCAPMFLQLPIFIGLYRTLSVDIELR 630

Query: 455 HA---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG----IWPIIMSLSMFIQMKM 507
            A    +  W  +LAA D    +  +        G   +G    I P+I+      Q KM
Sbjct: 631 QAAFASWTTWASNLAAPDMMYYWGDWMWDYLGGRGTGWLGPYFNILPMIVVSLFLAQQKM 690

Query: 508 SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             PPA   Q      ++N+M +V        PAGL IY+  S++  I ++ ++ K   ++
Sbjct: 691 FMPPATDEQTAMTQKMMNYMTLVMGLFFFRVPAGLCIYFITSSLWGIGERILVKKTLPSK 750

Query: 564 IGLI 567
               
Sbjct: 751 PHFD 754



 Score = 40.7 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 13/117 (11%), Positives = 33/117 (28%), Gaps = 21/117 (17%)

Query: 5   WNYFVAIALSVIIVYAWQNF---YVYP-RIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
              F  I  S+     + +    +  P   EE      + +TV+    +     A    +
Sbjct: 8   RRLFSFILSSMAFFLIYMSLRTMFAPPLPPEEDAIAEVDGETVEPAEDLVADTDASEPGE 67

Query: 61  RAQALSMSPRVELKNP-----------------SLIGSINLKGAQFDDLNLRGYHLD 100
                +      ++ P                  ++ ++N +G   + + L     +
Sbjct: 68  GEGEEANEDTDAVERPSSPTWSTLGSMDPTSGYVMLVTLNSRGGGIERIELTERKEN 124


>gi|296121961|ref|YP_003629739.1| 60 kDa inner membrane insertion protein [Planctomyces limnophilus
           DSM 3776]
 gi|296014301|gb|ADG67540.1| 60 kDa inner membrane insertion protein [Planctomyces limnophilus
           DSM 3776]
          Length = 699

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 137/674 (20%), Positives = 240/674 (35%), Gaps = 111/674 (16%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNF-----YVYPRIEEMNNERKNIQTV----------KQP 46
                +   IALS ++++ W  F     +  P   E   E+                   
Sbjct: 1   MEQRRFLTFIALSALVIFGWSGFVMPMLFPPPPKAEKLAEKAPEDQAADIAKPEELQPAD 60

Query: 47  NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLI---------------------GSINLK 85
             V  +  A    D  Q  + +    ++ P L                        +N +
Sbjct: 61  ALVPANVIAKAGADANQPEAPAQEKVVEPPKLQSFPNRQILLGSTNPDEPFFLAVKLNSR 120

Query: 86  GAQFDDLNLRG--YHLDVSSNSPIVTLLSPS------------NTKNAYFAELDYVSTAN 131
           G   + + L    Y   +  +S  V ++                  +   A L       
Sbjct: 121 GGSIETIELNDPRYR-SLDDSSKPVKVVGDDPLLKLKTTDVTIEAIDRQLAALGLSLAKI 179

Query: 132 NIELPNSNTVWNLISGKILTPTTPIKLVFKN---------ANNILFERTISLDEHYLFKI 182
           + E+   +     ++ +  +P   I+L                       +L + YL   
Sbjct: 180 DWEVVPGSESPEGVTFRFTSPDGSIQLEKAYRLPKVPGLAGKEPTKTERDNLGQGYLLDY 239

Query: 183 VDTVTNNSIDQIRFSPRGR----IMRHKPQTATNTFGVQEGFI-----AVLGDKSLVEQK 233
             TV N + +        +    +    P+  T    V+ GF+     +V        + 
Sbjct: 240 SLTVRNLTENPREVRYTMQGPVGVPLENPENVTKYRDVRVGFVLPDGESVESSHQSATEV 299

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD------------- 280
                    S +     ++G+   Y+AS+  P +        + +               
Sbjct: 300 LDAESSGKPSVWTRPIEYVGVDATYFASLVHPVENQIKERTIESVQSQVTYPAQEKHFSD 359

Query: 281 -GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY-EKDLAIPRFEMLIDW-- 336
                             P    T    L+AG K    +      D+          +  
Sbjct: 360 VSIELTSVPIQLAPQGTGPNAEATHHFQLYAGPKRAHLMAAVGAADVTEYHIGWNPFFFL 419

Query: 337 -GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
                 +  PM  L++  + L  N+GIAI+L T+ V+    PL +KQ  S   MK +QPK
Sbjct: 420 EPLVRLLVIPMLALLNGLHALGINYGIAIILLTIIVRTCLMPLTRKQAQSAQRMKEMQPK 479

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           + EL++KF       L++A ++LY  H  NPLAGCWP+LLQ+P+FFA+Y+ +S+S+++R 
Sbjct: 480 LKELQKKFAG-DADGLRRAQLELYSKHGFNPLAGCWPVLLQMPIFFALYRALSVSVDLRR 538

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPADK 514
           A  + WI +LAA D   +F L   +PF   G+    + PI+  +    Q K + PPPAD+
Sbjct: 539 AS-FLWIDNLAAPD--ALFELPFRVPFL--GWTEFNLLPILTIILFVAQQKILMPPPADE 593

Query: 515 GQAMILNW-----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM---HGAEIGL 566
            QA  + +     M V+        PAGL IY+  S++  + ++    +M   + A+   
Sbjct: 594 EQA--MQYRMMNIMMVMMGVMFYRVPAGLCIYFITSSLWGMAERWFFDRMNEWYPAKP-- 649

Query: 567 IDRLRSTFSKNYNS 580
                    +   S
Sbjct: 650 -----VEVKEKKPS 658


>gi|195953256|ref|YP_002121546.1| 60 kDa inner membrane insertion protein [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932868|gb|ACG57568.1| 60 kDa inner membrane insertion protein [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 514

 Score =  182 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 109/565 (19%), Positives = 213/565 (37%), Gaps = 75/565 (13%)

Query: 1   ME--RNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVD-NSY 53
           ME               I + A+Q     F+  P +     + K     +          
Sbjct: 1   MEQIDLKRLIAIFFAVSITILAYQYITEYFFKSPTVTTPQQKAKKTTANQAIFTYQYQGG 60

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
             + ++++ Q   +   V L            G +     ++ +  ++ +       + P
Sbjct: 61  INLFLNNQRQTQDIQNGVLLHFKDADVKFAYNGGRITYYYIKNFKQNLITPQEYALKVFP 120

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
                   +  + +                  S   ++ T    ++     NI   + IS
Sbjct: 121 LEVYTGNPSIDEAI----------------NFSNYNISVTNNNVVMTLKLPNISVVKDIS 164

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
            D+      +                  +      T           +  L +  +   K
Sbjct: 165 FDKEGFISKISVSLIGYNKPYFVMIGNNLNEEDLHTHQGPVFDINENVKRLDNDDIKTYK 224

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
                         + S+ G   +++         +    + +   D        F    
Sbjct: 225 ----------VITGNISFAGEESRFFFQGIKGHINSIQIYKERLGKDDFTFMLVSFDGKA 274

Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
           +              F G KE+  +              ++D+G F  + +P+F  + + 
Sbjct: 275 LM-------------FFGPKEYDLLKKA-------NLTDVLDFGDFRIVVEPLFKFLYFI 314

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           Y   GN+ I+I + T+ +++LFFPL  K  +S + +  + PK+++++EK+K  P ++ Q+
Sbjct: 315 YIKTGNWIISIFVLTLLIRILFFPLNYKSTLSMSKLSEVAPKMEKIKEKYKDDPVKM-QE 373

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
            +++LYK    NP +GC PIL+QIP+FF++YKVI I+ +++ A  + WI DL   DP   
Sbjct: 374 EIMKLYKEVGFNPASGCLPILVQIPIFFSLYKVIVITADLKLA-HFLWIHDLTQKDPYY- 431

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533
                             I PI+M ++M + ++++P P D  Q  I+    + FVF  +S
Sbjct: 432 ------------------ILPILMGITMIMSLRLTPNP-DPRQNSIMYISSLFFVFLFAS 472

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558
           FPA L+IYW+ +N++S +Q  +I K
Sbjct: 473 FPAALVIYWTINNILSFLQTYLIRK 497


>gi|153827655|ref|ZP_01980322.1| inner membrane protein OxaA [Vibrio cholerae MZO-2]
 gi|149737868|gb|EDM52773.1| inner membrane protein OxaA [Vibrio cholerae MZO-2]
          Length = 175

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 76/190 (40%), Positives = 112/190 (58%), Gaps = 21/190 (11%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434
            +PL K QY S A M+ +QPK+  +RE+      Q + + M++LYK   +NPL GC PIL
Sbjct: 1   MYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPIL 59

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           LQ+P+F A+Y  +  S+E+RH+PF+GWI DL+A DP                     I P
Sbjct: 60  LQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-------------------ILP 100

Query: 495 IIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
           ++M  SMF+  KMSP    D  Q  I+ +MPV+F F    FP+GL++YW  SN+++++QQ
Sbjct: 101 LLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQ 160

Query: 554 AVIMKMHGAE 563
            +I K    +
Sbjct: 161 TLIYKALEKK 170


>gi|261749487|ref|YP_003257173.1| putative inner membrane protein translocase component YidC
           [Blattabacterium sp. (Periplaneta americana) str. BPLAN]
 gi|261497580|gb|ACX84030.1| putative inner membrane protein translocase component YidC
           [Blattabacterium sp. (Periplaneta americana) str. BPLAN]
          Length = 604

 Score =  179 bits (454), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 107/527 (20%), Positives = 212/527 (40%), Gaps = 28/527 (5%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLRGYHLDV---SSNSPIVTLLSPSNTKNAYFAELDYVS 128
            L+N  L   I+  G   D++ L+ Y        S++  + L+  S+        ++   
Sbjct: 64  VLENEVLRLRISSLGGMIDEVFLKKYKAYDFIHLSHNKNLYLIKDSSFLYKMIFWVNSNK 123

Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL--FERTISLDEHYLFKIVDTV 186
             +   L  +N+++             I ++  +    +   +   +L E   + +   V
Sbjct: 124 KHSKKNLITTNSLYFHPFFFQKRGKLIILIMRAHNPYGVGFIDHIYTLSEGAQYHVGFYV 183

Query: 187 TNNSIDQIRFSPRGRIMRHKP----QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242
              ++     +    I   +     +   N               S  + ++   +KS  
Sbjct: 184 RTVNLFPFTGNKTISINLEQKVFSLEKDRNWENSYTQVYYSYKKNSHSKIQFLSEKKSEE 243

Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302
            N   + +W+    +++A++FIP K                  +   S   + I   + +
Sbjct: 244 KNI-SNLNWVAYKQQFFATIFIPKKPLKDCFIRSENFSSGVFLKKIQSNILLKIKEHEEV 302

Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362
                L+ G  +F  +  +  D  I            +        +  +      N+GI
Sbjct: 303 NIPFQLYFGPLDFSLLKKF--DQKIENIIPFGWGFLKWINKYFFLEIFQFLEKTNLNYGI 360

Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422
            I+L T+ VKL+  P+  KQY  +A MK I+P+IDE+  KF+ S P   Q+AM++LY+  
Sbjct: 361 IIILMTIVVKLILSPITYKQYKLSAMMKLIRPEIDEINNKFRNSDPLKKQRAMMELYQKA 420

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
            INP++GC+  L QIP+F++++K     + +R    + W+ DL + D  +I  L   +PF
Sbjct: 421 GINPMSGCFSALFQIPIFYSLFKFFPTLINLRGKS-FLWVDDLTSYD--SILELPFSIPF 477

Query: 483 YLPGFMHVGIWPIIMSLSMFIQMK----------MSPPPADKGQAMILNWMPVVFVFALS 532
           Y     HV +  ++ S ++ +  K          ++          IL  MP++ +  ++
Sbjct: 478 YGN---HVSLLTLLYSFALLVYTKLSNNVGSNDTLNNQNNASDMPFILYLMPLIMLLFIN 534

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           S+ +GL +Y+  SN+I+I     I K    E  +  +++    K   
Sbjct: 535 SYASGLSLYYFISNIINIGLIFFIKKFLLDENKIRQKIQENQKKPKK 581


>gi|330447274|ref|ZP_08310924.1| 60Kd inner membrane family protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328491465|dbj|GAA05421.1| 60Kd inner membrane family protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 230

 Score =  179 bits (454), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 93/231 (40%), Positives = 139/231 (60%), Gaps = 21/231 (9%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
             D+GW  FIA P+  L+S  + +VGN+G+AI++ T+ V+ L +PL K QY S A M+ +
Sbjct: 10  TPDYGWSSFIANPLHDLLSLIHGVVGNWGVAIIILTLIVRGLMYPLTKAQYTSMAKMRML 69

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           QPK+  LRE       Q + + M+ LYK   INPL GC P+LLQ+P+F A+Y V+++S E
Sbjct: 70  QPKLQALRESCGD-DRQRMSQEMMALYKKEQINPLGGCLPLLLQMPIFIALYTVLNLSTE 128

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511
           +R+APF+GWI++L+A DP                     + PI+M +SMF   K SP   
Sbjct: 129 LRNAPFFGWIQNLSAQDPYY-------------------VLPILMGISMFFIQKNSPSTV 169

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            D  Q  I+ +MPV+F      FPAGL++YW  SN+++++QQ +I +    
Sbjct: 170 TDPMQQKIMTFMPVIFTVFFLFFPAGLVLYWLTSNIVTLIQQTIIFRQLEV 220


>gi|294674133|ref|YP_003574749.1| inner-membrane protein, 60 kDa [Prevotella ruminicola 23]
 gi|294471953|gb|ADE81342.1| inner-membrane protein, 60 kDa [Prevotella ruminicola 23]
          Length = 587

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 97/534 (18%), Positives = 209/534 (39%), Gaps = 27/534 (5%)

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
           A     +  V LKN  +  + N KG       ++ +  +  ++   VTL   +       
Sbjct: 34  AALNGKNQPVVLKNDKVELTFNTKGGTLAKAVIKNF--ENLNDQMGVTLFDENT------ 85

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181
            +++++    +  +   +  +      +   T  +  +  N  +I F   +  D    F 
Sbjct: 86  QQMNFMLAGKSENIITKDLFFTPS--NVTDSTLTMTALAGNGGSIEFNYVLGKDYMLHFN 143

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
           +                         Q                 +K+      S+  +  
Sbjct: 144 MKANGLQGMFAPNYQEMSIEWTDLARQQEKGFTFENRYTSVTYKEKNGGTDYLSETSEKI 203

Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT--ILPG 299
             N  E+  W+   ++++++  I   E + +S    +         K    ++     P 
Sbjct: 204 DENIDEALDWVAFKNQFFSAALIAKDEFAANSLLTSIPQQKGSGYLKQFNAKLKTAFDPT 263

Query: 300 KSITTTNFLFAGAKEFPTIHH------YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353
            +  T   ++ G  +F  I        + KDL + +   L  W   +        +  + 
Sbjct: 264 GAKATEFEMYIGPNDFRLIKDVEQQSAFGKDLDLEQLVNLGWWLVRWINRWFTIYVFDWL 323

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-VLQ 412
            +   + GI ++L T+ +K++ FP+ KK Y+S+A M+ ++PK+DE  +++ +   Q   Q
Sbjct: 324 TSWGFSMGIVLILITLLLKVITFPMVKKSYMSSAKMRVLKPKLDEATKQYDKPEDQMKKQ 383

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           +AM+QLY  + ++PL GC P+L+Q P++ A++  +  ++++R    + WI DL+  DP  
Sbjct: 384 QAMMQLYSQYGVSPLGGCLPMLIQFPIWMAMFFFVPNAIQLRRES-FLWISDLSTYDPII 442

Query: 473 IF--TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM----PVV 526
            +   ++GI        +   +  ++ S     Q +         Q  ++ WM    PV+
Sbjct: 443 EWGTQIWGIGDHLSLTCILFCVANVLYSYMTMRQQRDQMVGQQAEQMKMMQWMMYLMPVM 502

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           F F  + + +GL  Y+  S   S      + +    +  L+  L + + +N N+
Sbjct: 503 FFFMFNDYSSGLNFYYFISLFFSAAIMWTL-RKTTNDEKLLAILEAKYKENKNN 555


>gi|213865390|ref|ZP_03387509.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           M223]
          Length = 425

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 91/440 (20%), Positives = 172/440 (39%), Gaps = 33/440 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
              + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  F   + G+     
Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286

Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            + A  + + PG++   T+ L+ G +    +         P  ++ +D+GW +FI++P+F
Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QPKI  +RE+     
Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401

Query: 408 PQVLQKAMIQLYKTHNINPL 427
            Q   + M+ LYK   +NP 
Sbjct: 402 -QRQSQEMMALYKAEKVNPW 420


>gi|126643001|ref|YP_001085985.1| hypothetical protein A1S_2980 [Acinetobacter baumannii ATCC 17978]
 gi|126388885|gb|ABO13383.1| hypothetical protein A1S_2980 [Acinetobacter baumannii ATCC 17978]
          Length = 164

 Score =  177 bits (447), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 62/163 (38%), Positives = 92/163 (56%), Gaps = 19/163 (11%)

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
            +  ++          + M+ LYK   +NPL+GC P+LLQ+P+F A+Y V+  S+E+RHA
Sbjct: 8   MQRMKEEFGEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELRHA 67

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
           P+ GWI+DL+A DP                     I P+IM  +MF Q  ++P PAD  Q
Sbjct: 68  PWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQPADPMQ 108

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           A +   MP++F   +  FPAGL++YW  +N I+I+QQ  I K 
Sbjct: 109 AKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINKS 151


>gi|218262804|ref|ZP_03477162.1| hypothetical protein PRABACTJOHN_02842 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223099|gb|EEC95749.1| hypothetical protein PRABACTJOHN_02842 [Parabacteroides johnsonii
           DSM 18315]
          Length = 559

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 99/558 (17%), Positives = 215/558 (38%), Gaps = 56/558 (10%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  +   L  +++  +  +   P  E++  +R+   ++ Q            ++ 
Sbjct: 1   MD--KNTIIGFLLIGVVLIVF-TWLNQPTPEQIEAQRRMQDSIAQIEYAKQLEQQKELNR 57

Query: 61  RAQA---------------------------LSMSPRVELKNPSLIGSINLKGAQFDDLN 93
            A+A                           +       L+N  +   +  KG +   + 
Sbjct: 58  EAKADDELAGLPDSVRLARLQNTFGVFADAMVGEEGSTVLENELVEVRLANKGGRVGYVR 117

Query: 94  LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153
           L+ Y    +     + L    ++      + D+     +  + N+  ++          +
Sbjct: 118 LKKYD---NYKGEPLVLFDEKDS------KFDFTLITADNRVVNTGDLYFTPVKGNDQNS 168

Query: 154 TPIKLVFKNANNILFERTISLDEHY-LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212
             ++L     +++ F  ++  D++   F I  T  N  +     +      +   Q    
Sbjct: 169 ITMRLNTGEGSHLDFIYSLKPDDYMLQFSIKGTGLNGVLSPGTTALDLLWQQKITQQEKG 228

Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
               ++ +  V       + +Y    K+          W+   D Y++S+ I   E    
Sbjct: 229 R-KFEDRYATVYYKFMADDVEYLSETKNDSKQLSNRLKWVAYKDMYFSSILIAGNEGFES 287

Query: 273 SQFKYL---SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329
           +         DG    + K + +    L G   T     + G  +F  +  Y+ D+    
Sbjct: 288 TTIDSKMLPEDGSFLKEYKTTTSVPFDLKGNEAT-DMRFYFGPNQFSLLKSYDDDVEKAD 346

Query: 330 ---FEMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
               E ++  GW    +     +  L ++    + ++G+ I L TV VKL+ FPL  K Y
Sbjct: 347 QLDLEKIVPLGWGIFRWVNQYFVIPLFNFLGQFIHSYGLLIFLLTVIVKLILFPLTYKSY 406

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQIPVFFA 442
           +S+A M+ ++P+++EL  K+      V ++ A ++LY     +P+AGC P+LLQ+P+  A
Sbjct: 407 MSSAKMRVLRPQVEELNAKYPGQDKAVERQRATMELYSRAGASPMAGCVPMLLQMPILVA 466

Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSM 501
           ++     ++E+RH   + W  DL+  D    +  +  +P   P F  H+ ++ ++M+++ 
Sbjct: 467 LFMFFPSAIELRHQS-FLWAHDLSTYDAIVSWNTY--IPIITPYFGNHISLFCLLMTVTN 523

Query: 502 FIQMKMSPPPADKGQAMI 519
            I  K +    + GQ  +
Sbjct: 524 IIYTKFNMEQTNTGQQQM 541


>gi|62185087|ref|YP_219872.1| putative inner membrane protein translocase component YidC
           [Chlamydophila abortus S26/3]
 gi|62148154|emb|CAH63911.1| putative lipoprotein [Chlamydophila abortus S26/3]
          Length = 794

 Score =  176 bits (446), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 101/476 (21%), Positives = 189/476 (39%), Gaps = 41/476 (8%)

Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193
            + +   + N ++           ++   + +   ++T +  E   +     V  N    
Sbjct: 327 NIVSGRDLVNPVTSGYRVSVFNSNVLELESYDGSIKKTYTFPEQQPYAFEVAVGLNRSSD 386

Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253
             +   G           +        +       L + K    +            W+ 
Sbjct: 387 DMWITSGVPEVEIMSNTFSPAIKY--RVIKKNKGQLDKVKLPKSKDPLSLRSGVYPQWIL 444

Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN--------------EITILPG 299
            S+ Y+  +  P  +        Y+S      +                     +  LP 
Sbjct: 445 NSNGYFGIILSPLTDIPAGYAAAYVSGNSVPTRLSSLYPKNQAYPASKYPGYETLLPLPK 504

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF----------IAKPMFML 349
           +  T    ++AG    PT+   ++    P+ E         F           A  +F++
Sbjct: 505 EEGTYRFLVYAGPLAEPTLKALDRAYTNPKGENSQYLDCITFRGLFAFITEPFAALLFII 564

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           M +F  + G++GI+I+L TVF+KLL +PL      S   M+ + P I E+++K+ +  P+
Sbjct: 565 MKFFKMITGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKY-KKEPK 623

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAA 468
             Q  ++ LYKT+ +NP+ GC P+L+Q+P   A++ ++  S  +R A F  GWI +L A 
Sbjct: 624 RAQMEVMALYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAP 683

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-N 521
           D    +T      +++    H+   PI++ + MFIQ K+S      P    + Q   +  
Sbjct: 684 DVLFSWTTPV---WFIGNEFHL--LPILLGVVMFIQQKLSALQKKGPVTDQQRQQEAMGT 738

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
            M ++F F   +FP+GL IYW  S ++ ++QQ V  K+      L + +     K 
Sbjct: 739 MMALLFTFMFYNFPSGLNIYWFSSMLLGLIQQWVTNKILD-RQHLKNEITVNKKKQ 793


>gi|15639934|ref|NP_219385.1| putative inner membrane protein translocase component YidC
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189026172|ref|YP_001933944.1| inner membrane protein translocase component YidC [Treponema
           pallidum subsp. pallidum SS14]
 gi|3323271|gb|AAC65906.1| membrane protein [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189018747|gb|ACD71365.1| membrane protein [Treponema pallidum subsp. pallidum SS14]
          Length = 665

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 111/573 (19%), Positives = 218/573 (38%), Gaps = 52/573 (9%)

Query: 37  RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96
             + Q   QP    +    V  +   +   +     ++ P +  +   +G       LR 
Sbjct: 100 AADTQETTQPAAHPSGQVLVFPESETEE-RVERTYVVRTPLVQVTFTNRGGDILSYQLRE 158

Query: 97  YH-----------LDVSSNSPIVTLLSPSN---TKNAYFAELDYVSTANNIELPNSNTVW 142
           ++                +    +L          NA F     +       +    +V 
Sbjct: 159 HYAAQRREYVEMVEQARPDHRAFSLALGDEYAPNVNALFQVKQEIGARGVHSIGFYRSVA 218

Query: 143 NLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNN-----SIDQIRFS 197
              +    TP    K      +N +FE  +SL    L +  D+         +      +
Sbjct: 219 TQHADGTRTPFVLAKRYVFYPDNYMFELHVSLSADVLEEREDSRQGAKVRAVAETNAGPA 278

Query: 198 PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK-------------SSISN 244
                  +     T ++ ++          +  + ++                       
Sbjct: 279 TTVLARANGFDFGTASYTLRTPPEIGPERNAADKYEFRTFMVGAGGKAKTYALKGDGREQ 338

Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304
                SW  +S KY+A + +P+   S               Q   +     +        
Sbjct: 339 VDTPVSWASVSGKYFALIVLPNDADSLKRLVLSAPQAETAVQHHIAFVRRAVAQPAVADV 398

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEM-------LIDWGWFYFIAKPMFMLMSYFYNLV 357
              ++ G      +  Y      P            +  G  Y +   +  L+  FY L+
Sbjct: 399 -YRVYIGPCAEQYLSAYNVASRNPYGLERTYIDAVAVSGGILYPLEVLLKWLLRLFYTLI 457

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+L T+ +K+LFFPL K+ +++   M+ +QP +  ++E++K +  Q + + M +
Sbjct: 458 PNWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQPHMQRIQERYKGNT-QKIHEEMAK 516

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTL 476
           LY+    NPL+GC P L+Q+P+ FA+Y++ +   E R A F   WI DL+ AD  +++TL
Sbjct: 517 LYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPYWIPDLSLAD--SVWTL 574

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ---AMILNW-MPVVFVFALS 532
              LP  +  +  + + P++  +S  +  K++  P  + Q     I+ + MP+ F F   
Sbjct: 575 PFALP--VTQWTQMRMLPVLYVVSQIMFSKLTQVPHTEQQKTSMTIMTYVMPLFFFFFFY 632

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             P+GL++YW+  N +++VQQ ++MK    +  
Sbjct: 633 DAPSGLLVYWTAMNGVTLVQQ-LVMKRTANKNK 664


>gi|315023046|gb|EFT36059.1| OxaI/YidC membrane insertion protein [Riemerella anatipestifer
           RA-YM]
          Length = 596

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 97/560 (17%), Positives = 203/560 (36%), Gaps = 42/560 (7%)

Query: 1   MERN----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M++N     N  +   +  + +     ++   + E+   +    Q      +   +   V
Sbjct: 2   MQQNNGLDKNQLIGFVVFTLFLLGVMLYFQKQQTEQEQQQVATEQ------KAGATNNIV 55

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
              +     +   +V LKN  +    +  G Q   L +  Y       +     L     
Sbjct: 56  KATNLPVKANEIQKVSLKNDKISVEFSGLGGQISSLLMNNYKAYNKKTNQNDLPLYLIER 115

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
            N+ +       +   I   +      +           + +        + +   +L +
Sbjct: 116 NNSSYGFKFKDKSGKEINTKDLVFTPQVNGN-------TVTMTSALNGGAVVQFIYTLKD 168

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           +    +   V    +  I    +   + +           QE             +    
Sbjct: 169 YQ---VDFQVATKGLSSIVSGGKASFVWNYTPKEQEKGRAQEQQHTEFVYAFNNYKSTDY 225

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
             ++S+    E  +WL +  +++  +         +S           Y  KF  N    
Sbjct: 226 DARTSMDETKEVLNWLAVKQQFFTPIIEAKNGFK-NSTGHQDMIEEGEYLKKFDFNGELE 284

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN- 355
           + G     +   +    +   +  ++K+     F+ +I  GW +      ++ +  +   
Sbjct: 285 ITGGEFNQSFSWYFLPLDLKLLKTFDKN-----FDEIIPLGWSFIGTMNCWIFIPMYNMI 339

Query: 356 --LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
                  G  I L T+ VK++  P+  KQ+  +A MK I+P+I+E+  K K + P   Q+
Sbjct: 340 SSWGIAAGWVIFLMTILVKVVLSPIMYKQHKLSAMMKVIRPEIEEVNAKLKDADPMKKQQ 399

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
           A++++Y+   +N LAGC P LLQIP+F+A+++     L++R    + +  DL A D  ++
Sbjct: 400 AVMEVYRKAGVNQLAGCLPALLQIPIFYALFRFFPNMLDLRGKG-FWFATDLTAYD--DL 456

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI------LNWMPVV 526
             L   +PF      H+ I+ +  +  + I   M+        Q  +      +   PV+
Sbjct: 457 IKLPFHIPFLGE---HISIFALACTAVLLIYTVMTAGNMQQPTQEGMPNMKPLMYIFPVM 513

Query: 527 FVFALSSFPAGLIIYWSWSN 546
           F+F L+S  +GL  Y+  SN
Sbjct: 514 FLFFLNSAASGLSWYYFVSN 533


>gi|329942824|ref|ZP_08291603.1| 60Kd inner membrane family protein [Chlamydophila psittaci Cal10]
 gi|332287416|ref|YP_004422317.1| putative inner membrane protein translocase component YidC
           [Chlamydophila psittaci 6BC]
 gi|313847996|emb|CBY16993.1| putative lipoprotein [Chlamydophila psittaci RD1]
 gi|325506880|gb|ADZ18518.1| putative inner membrane protein translocase component YidC
           [Chlamydophila psittaci 6BC]
 gi|328815084|gb|EGF85073.1| 60Kd inner membrane family protein [Chlamydophila psittaci Cal10]
 gi|328914664|gb|AEB55497.1| Inner membrane protein oxaA [Chlamydophila psittaci 6BC]
          Length = 794

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 101/476 (21%), Positives = 189/476 (39%), Gaps = 41/476 (8%)

Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193
            + +   + N ++           ++   + +   ++T +L E   +     V  N    
Sbjct: 327 NIVSGRDLVNPVASGYRVSVFNGNVLELESYDGSIKKTYTLPEQQPYAFEVAVGLNRSSD 386

Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253
             +   G           +        +       L + K    +            W+ 
Sbjct: 387 DIWITSGVPEVEIMSNTFSPAIKY--RVIKKNKGQLDKVKLPKSKDPLSLRSGIYPQWIL 444

Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN--------------EITILPG 299
            S+ Y+  +  P  +        Y+S      +                     +  LP 
Sbjct: 445 NSNGYFGIILSPLTDIPAGYAAAYVSGNSVPTRLSLLYPKNQAYPASKYPGYETLLPLPK 504

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF----------IAKPMFML 349
           +  T    ++AG    PT+   ++    P  E         F           A  +F++
Sbjct: 505 EEGTYRFLVYAGPLAEPTLKALDQAYTNPNGENPQYLDCITFRGLFAFITEPFAALLFII 564

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           M +F  + G++GI+I+L TVF+KLL +PL      S   M+ + P I E+++K+ +  P+
Sbjct: 565 MKFFKMITGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKY-KKEPK 623

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAA 468
             Q  ++ LYKT+ +NP+ GC P+L+Q+P   A++ ++  S  +R A F  GWI +L A 
Sbjct: 624 RAQMEVMALYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAP 683

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-N 521
           D    +T      +++    H+   PI++ + MF+Q K+S      P    + Q   +  
Sbjct: 684 DVLFSWTTPV---WFIGNEFHL--LPILLGIVMFVQQKLSALKKKGPVTDQQRQQEAMGT 738

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
            M ++F F   +FP+GL IYW  S ++ ++QQ V  K+      L + +     K 
Sbjct: 739 MMALLFTFMFYNFPSGLNIYWFSSMLLGLIQQWVTNKILD-RQHLKNEITVNKKKQ 793


>gi|282890627|ref|ZP_06299150.1| hypothetical protein pah_c022o237 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499624|gb|EFB41920.1| hypothetical protein pah_c022o237 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 840

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 105/493 (21%), Positives = 190/493 (38%), Gaps = 43/493 (8%)

Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
              LL      +                L +     + +   +    +   +   N N  
Sbjct: 341 FYPLLRRDVLPSENQKATRVAPVYYAFNLISEYPEISNLVYTVKHFDSKSIVFEANQNFR 400

Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226
              +T +L+E+        V N +I     S    +    P+    +          +  
Sbjct: 401 RITKTYTLEENEKNA--PYVFNATIKIEGDSRGLWVGSGVPEVEIISGSPAPALKYRITR 458

Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP------------SKETSFHSQ 274
           K   E         +I+       W+  S+ +  ++  P                   S+
Sbjct: 459 KGKSEVVSISPPSDAITVTSIFPDWICNSNGFLGTILDPLTEIDPGLRVDHVSGVEVPSR 518

Query: 275 FKYLSDGHARYQAKFSANEITILPGKS--ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
              L     R++A+     +T+LP KS   T T  +FAG      +   +   + P    
Sbjct: 519 LTILGQKTDRFKAQDLPGYVTLLPLKSSGGTATFRMFAGPFASNVLKTVDATFSNPETGY 578

Query: 333 LIDW-------GWFYFIAKPMFMLMSYFYNLVGN----FGIAIMLTTVFVKLLFFPLAKK 381
             D+       GWF FI++P    +        +    +  +I+L TV ++++ +PL   
Sbjct: 579 NPDYIACQSFHGWFSFISEPFAKFLFILMQFFHSVTGSWAFSIILLTVALRVMLYPLNAW 638

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
              S   M+ I P++  ++E+  +  P+  Q  ++ LYK   +NP++GC P+L+Q+P   
Sbjct: 639 STKSMLRMQQIAPEVKAIQERH-KKDPKKAQLEIMNLYKERGVNPVSGCLPLLIQMPFLI 697

Query: 442 AIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            ++ ++  + E+R A F  GWI +L A D    +     LPF    F    + PI++ + 
Sbjct: 698 GMFDLLKSTFELRGASFIPGWIDNLTAPDVLFSWQTP--LPFIGNQF---HLLPILLGVV 752

Query: 501 MFIQMK-MSPPPADKGQ-------AMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           M++Q + MS  P D  Q         ++ N M VVF      FP+GL IYW  S ++ ++
Sbjct: 753 MWLQQRFMSAAPKDANQMTEQERQQRVMGNMMAVVFTVMFYQFPSGLNIYWLSSMLLGML 812

Query: 552 QQAVIMKMHGAEI 564
           QQ  + K    E 
Sbjct: 813 QQWWMGKKMKKET 825


>gi|313206272|ref|YP_004045449.1| protein translocase subunit yidc [Riemerella anatipestifer DSM
           15868]
 gi|312445588|gb|ADQ81943.1| protein translocase subunit yidC [Riemerella anatipestifer DSM
           15868]
 gi|325336286|gb|ADZ12560.1| YidC [Riemerella anatipestifer RA-GD]
          Length = 596

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 97/560 (17%), Positives = 203/560 (36%), Gaps = 42/560 (7%)

Query: 1   MERN----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M++N     N  +   +  + +     ++   +  +   +    Q      +V  +   V
Sbjct: 2   MQQNNGLDKNQLIGFVVFTLFLLGVMLYFQKQQTGQEQQQVATEQ------KVGATNNIV 55

Query: 57  LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116
              +     +   +V LKN  +    +  G Q   L +  Y       +     L     
Sbjct: 56  KATNLPVKANEIQKVSLKNDKISVEFSGLGGQISSLLMNNYKAYNKKTNQNDLPLYLIER 115

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
            N+ +       +   I   +      +           + +        + +   +L +
Sbjct: 116 NNSSYGFKFKDKSGKEINTKDLVFTSQVNGN-------TVTMTSVLNGGAIVQFIYTLKD 168

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
           +    +   V    +  I    +   + +           QE             +    
Sbjct: 169 YQ---VDFQVATKGLSSIVSGDKASFVWNYTPKEQEKGRAQEQQHTEFVYAFNNYKSTDY 225

Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296
             ++S+    E  +WL +  +++  +         +S           Y  KF  N    
Sbjct: 226 DARTSMDETKEVLNWLAVKQQFFTPIIEAKNGFK-NSTGHQDMIEEGEYLKKFDFNGELE 284

Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN- 355
           + G     +   +    +   +  ++K+     F+ +I  GW +      ++ +  +   
Sbjct: 285 ITGGEFNQSFSWYFLPLDLKLLKTFDKN-----FDEIIPLGWSFIGTMNRWIFIPMYNMI 339

Query: 356 --LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
                  G  I L T+ VK++  P+  KQ+  +A MK I+P+I+E+  K K + P   Q+
Sbjct: 340 SSWGIAAGWVIFLMTILVKVVLSPIMYKQHKLSAMMKVIRPEIEEVNAKLKDADPMKKQQ 399

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
           A++++Y+   +N LAGC P LLQIP+F+A+++     L++R    + +  DL A D  ++
Sbjct: 400 AVMEVYRKAGVNQLAGCLPALLQIPIFYALFRFFPNMLDLRGKG-FWFATDLTAYD--DL 456

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI------LNWMPVV 526
             L   +PF      H+ I+ +  +  + I   M+        Q  +      +   PV+
Sbjct: 457 IKLPFHIPFLGE---HISIFALACTAVLLIYTVMTAGNMQQPTQEGMPNMKPLMYIFPVM 513

Query: 527 FVFALSSFPAGLIIYWSWSN 546
           F+F L+S  +GL  Y+  SN
Sbjct: 514 FLFFLNSAASGLSWYYFVSN 533


>gi|38502850|sp|O51829|OXAA_BUCMP RecName: Full=Membrane protein oxaA
 gi|2754805|gb|AAC04234.1| inner membrane protein [Buchnera aphidicola (Myzus persicae)]
          Length = 240

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 89/254 (35%), Positives = 148/254 (58%), Gaps = 26/254 (10%)

Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363
             + L+ G +    +         P  ++ +D+GW +F+++P+F L++   +++ N+G +
Sbjct: 5   IKSKLWVGPEIQKEMKLVA-----PNLDLTVDYGWLWFLSQPLFKLLTIINSIINNWGFS 59

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L T  +K++ +PL K QYVS + ++ +QPKI E++E F  +  Q + + MI LYK   
Sbjct: 60  IILITFIMKIITYPLTKSQYVSMSKIRALQPKIKEIKEAFSDNK-QRISQEMIILYKKEK 118

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           INPL G  P+ +Q+PVF ++Y ++  S+E+RHAPF  WIKDL++ DP             
Sbjct: 119 INPLGGFLPVFIQMPVFLSLYYMLIGSVELRHAPFVLWIKDLSSQDPFY----------- 167

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
                   + PIIM L+MF   K S    +D  Q  I+N+MPV+F      FP+GL++Y+
Sbjct: 168 --------VLPIIMGLTMFFIQKTSSNNISDPIQKKIMNFMPVIFTVFFLWFPSGLVLYY 219

Query: 543 SWSNVISIVQQAVI 556
             SN+++I+QQ  I
Sbjct: 220 IVSNLVTIIQQKFI 233


>gi|29840233|ref|NP_829339.1| putative inner membrane protein translocase component YidC
           [Chlamydophila caviae GPIC]
 gi|34098398|sp|P59809|OXAA_CHLCV RecName: Full=Inner membrane protein oxaA
 gi|29834581|gb|AAP05217.1| inner membrane protein, putative [Chlamydophila caviae GPIC]
          Length = 794

 Score =  174 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 102/476 (21%), Positives = 189/476 (39%), Gaps = 41/476 (8%)

Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193
            + +   + N ++      T    ++   +N+   ++T  L +   +     V  N    
Sbjct: 327 NIVSGRELTNSVASGYRVSTFNSTMLELESNDGSIKKTYKLPQQQPYAFEVEVGVNRASD 386

Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253
             +   G         A          +       L + K    +            W+ 
Sbjct: 387 DLWITSGIPEVEIMSNAFTPAIKY--HVIKKNKGQLDKVKLPKAKDPLALRSGVYPQWIL 444

Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN--------------EITILPG 299
            S+ Y+  +  P  +        Y+       +    +                +  LP 
Sbjct: 445 NSNGYFGIILSPLTDIPAGYAASYVPGSSVPTRLSLLSPKNQAYPASKYPGYETLLPLPQ 504

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF----------IAKPMFML 349
           K  T    ++AG    PT+   +K     + E         F           A  +F++
Sbjct: 505 KEGTHRFLVYAGPLADPTLRVLDKAYTNSKGESPQYLDCITFRGFFAFITEPFAALLFII 564

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           M +F  + G++GI+I+L TVF+KLL +PL      S   M+ + P I E+++K+ +  P+
Sbjct: 565 MKFFRMITGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKY-KKEPK 623

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAA 468
             Q  ++ LYKT+ +NP+ GC P+L+Q+P    ++ ++  S  +R A F  GWI +L A 
Sbjct: 624 RAQMEVMALYKTNKVNPITGCLPLLIQLPFLIVMFDLLKSSFLLRGASFIPGWIDNLTAP 683

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-N 521
           D    +T      ++L    H+   PI++ + MF Q K+S      P    + Q   +  
Sbjct: 684 DVLFSWTTPV---WFLGNEFHL--LPILLGIVMFAQQKISASKKKGPATDQQRQQETMGT 738

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
            M ++F F   +FP+GL IYW  S ++ ++QQ    K+  ++  L + +     K 
Sbjct: 739 MMALLFTFMFYNFPSGLNIYWFSSMLLGLIQQWFTNKILDSK-HLKNEISVNKKKQ 793


>gi|325107204|ref|YP_004268272.1| membrane protein oxaA [Planctomyces brasiliensis DSM 5305]
 gi|324967472|gb|ADY58250.1| Membrane protein oxaA [Planctomyces brasiliensis DSM 5305]
          Length = 680

 Score =  174 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 111/545 (20%), Positives = 211/545 (38%), Gaps = 54/545 (9%)

Query: 42  TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG--YHL 99
           +         +       DR   L         N  L   +  +GA    + L    Y  
Sbjct: 70  SESADEPKPETVELPDYPDRLITLGSLKTDA--NTFLQVDLTSRGAAIATVQLNDPRYRE 127

Query: 100 DVSSNSPIVTLLS-PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158
                 P+  +   P  ++  +  ++D V+     +  + + V   +  + LT  +    
Sbjct: 128 LTDREQPLQLVGPAPKGSQLTFDLKIDEVNRQLLEQRTSLDRVNWQVDEETLTDRSVTFT 187

Query: 159 VFKNANNILFERTISLDEHYL-----------FKIVDTVTNNSIDQIRFSPRGRIMRHKP 207
                  +   +T  L E                +     N S          +     P
Sbjct: 188 YPSPDGTLELRKTYQLQEGNPDDRNADTPGYCLNVSLEFRNLSDKPQMLVYNLQGPVGFP 247

Query: 208 QTATNTFGVQEGFIA--------VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYW 259
                         A             S  E      E+S I +      ++GI  +Y+
Sbjct: 248 LEEAENTRRFLALQAGFVRGNSVNHEQVSAQEIAEQAEEESGIDSLQAPVRYVGIDGQYF 307

Query: 260 ASVFIPSKETS---------FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310
           A++ IP +                 +   +  +       +N + +    ++T T  L+ 
Sbjct: 308 AALLIPDENQEDENWIAQTQPQLTKRGTDEQSSLISLTLVSNPVELPANGAVTHTYTLYT 367

Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTV 369
           G K    +  ++ D  I       ++GWF  I+K M  +M++F+N L   +G+AI++ TV
Sbjct: 368 GPKRTSLLRPFDADAII-------EYGWFGAISKLMLAIMNFFHNTLYLPYGLAIVMLTV 420

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429
            V+   +P+++K  ++   MK +QP+I+E+R+K++    + L KA +++ K       +G
Sbjct: 421 IVRGAMYPISRKHALAAKKMKEMQPRIEEIRKKYENDKEK-LAKAQMEIMKESGF--FSG 477

Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489
           C P+LLQ+P+F  +Y+ + +S+++R A  + WI +LAA D   +F +   LPF    F  
Sbjct: 478 CLPMLLQLPIFIGLYQALYVSVDLRMA-EFLWINNLAAPD--RLFQMPFSLPFLGNDF-- 532

Query: 490 VGIWPIIMSLSMFIQMKMSPPPA----DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
             + P++      +Q KM  PP        Q  ++ +M +         PAGL IY+  S
Sbjct: 533 -NLLPMLTVALFVMQQKMFAPPPANEEQALQQKMMGYMMIFIGVMFYRVPAGLCIYFIAS 591

Query: 546 NVISI 550
           ++ +I
Sbjct: 592 SLWAI 596


>gi|283782053|ref|YP_003372808.1| 60 kDa inner membrane insertion protein [Pirellula staleyi DSM
           6068]
 gi|283440506|gb|ADB18948.1| 60 kDa inner membrane insertion protein [Pirellula staleyi DSM
           6068]
          Length = 841

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 79/322 (24%), Positives = 149/322 (46%), Gaps = 27/322 (8%)

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
                 ++  +   TI PG+++     +F G KE   +  Y     I        W +  
Sbjct: 521 KTMNVSSRLVSQVETIAPGETLVHNYRVFFGPKEPDVLKDYGMTSLIEY-----GWSYAA 575

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
             A  +  ++   Y+++ N+GIAI+L TV V+    P++ KQ  S A M+ + P++ +++
Sbjct: 576 IPAFILRSVLETIYSIIPNYGIAIILLTVIVRSAMIPVSLKQAKSAAMMQQLAPEMAKIK 635

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA---P 457
           EK+  +  +   +A+ +LY  HN NP  GC P+ +Q+PVF  +Y+ +S+ +E+R A   P
Sbjct: 636 EKYADNMEK-QSQAIRELYAKHNFNPFGGCLPVFIQLPVFIGLYRCLSVDIELRDAALFP 694

Query: 458 FWGWIKDLAAADPTNIFT--LFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKM-SPPPA 512
              W  +LA  D    +   +F ++     G++     ++P+I      +Q KM +PP  
Sbjct: 695 GIAWASNLAGPDKLFYWKDYVFSMMGDEANGWLGPFFNVFPLITVSLFLVQQKMFTPPAT 754

Query: 513 D---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE------ 563
           D     Q  ++ +M V         PAGL +Y+  S++  I ++ ++ K    +      
Sbjct: 755 DEQTAMQQKMMTYMTVFMGVMFYKVPAGLCVYFITSSLWGIAERKLLPKPKPVDASAAAV 814

Query: 564 ----IGLIDRLRSTFSKNYNSQ 581
                   +  +S   KN + +
Sbjct: 815 ISSSTKTDEDAKSNGKKNKDKR 836


>gi|38502857|sp|O66103|OXAA_TREPA RecName: Full=Inner membrane protein oxaA
 gi|291060304|gb|ADD73039.1| inner membrane protein OxaA [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 622

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 111/573 (19%), Positives = 218/573 (38%), Gaps = 52/573 (9%)

Query: 37  RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96
             + Q   QP    +    V  +   +   +     ++ P +  +   +G       LR 
Sbjct: 57  AADTQETTQPAAHPSGQVLVFPESETEE-RVERTYVVRTPLVQVTFTNRGGDILSYQLRE 115

Query: 97  YH-----------LDVSSNSPIVTLLSPSN---TKNAYFAELDYVSTANNIELPNSNTVW 142
           ++                +    +L          NA F     +       +    +V 
Sbjct: 116 HYAAQRREYVEMVEQARPDHRAFSLALGDEYAPNVNALFQVKQEIGARGVHSIGFYRSVA 175

Query: 143 NLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNN-----SIDQIRFS 197
              +    TP    K      +N +FE  +SL    L +  D+         +      +
Sbjct: 176 TQHADGTRTPFVLAKRYVFYPDNYMFELHVSLSADVLEEREDSRQGAKVRAVAETNAGPA 235

Query: 198 PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK-------------SSISN 244
                  +     T ++ ++          +  + ++                       
Sbjct: 236 TTVLARANGFDFGTASYTLRTPPEIGPERNAADKYEFRTFMVGAGGKAKTYALKGDGREQ 295

Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304
                SW  +S KY+A + +P+   S               Q   +     +        
Sbjct: 296 VDTPVSWASVSGKYFALIVLPNDADSLKRLVLSAPQAETAVQHHIAFVRRAVAQPAVADV 355

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEM-------LIDWGWFYFIAKPMFMLMSYFYNLV 357
              ++ G      +  Y      P            +  G  Y +   +  L+  FY L+
Sbjct: 356 -YRVYIGPCAEQYLSAYNVASRNPYGLERTYIDAVAVSGGILYPLEVLLKWLLRLFYTLI 414

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            N+G+AI+L T+ +K+LFFPL K+ +++   M+ +QP +  ++E++K +  Q + + M +
Sbjct: 415 PNWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQPHMQRIQERYKGNT-QKIHEEMAK 473

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTL 476
           LY+    NPL+GC P L+Q+P+ FA+Y++ +   E R A F   WI DL+ AD  +++TL
Sbjct: 474 LYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPYWIPDLSLAD--SVWTL 531

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ---AMILNW-MPVVFVFALS 532
              LP  +  +  + + P++  +S  +  K++  P  + Q     I+ + MP+ F F   
Sbjct: 532 PFALP--VTQWTQMRMLPVLYVVSQIMFSKLTQVPHTEQQKTSMTIMTYVMPLFFFFFFY 589

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             P+GL++YW+  N +++VQQ ++MK    +  
Sbjct: 590 DAPSGLLVYWTAMNGVTLVQQ-LVMKRTANKNK 621


>gi|89898342|ref|YP_515452.1| putative inner membrane protein translocase component YidC
           [Chlamydophila felis Fe/C-56]
 gi|89331714|dbj|BAE81307.1| inner membrane protein [Chlamydophila felis Fe/C-56]
          Length = 794

 Score =  173 bits (438), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 100/477 (20%), Positives = 195/477 (40%), Gaps = 43/477 (9%)

Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193
            + +   + N ++           ++   +N+   ++T  L E   +    +V    + Q
Sbjct: 327 NVVSGRDLVNPVASGYRVSVFNSNMLELESNDGSIKKTYKLPEQQPYSFEVSV---GLTQ 383

Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGF-IAVLGDKSLVEQKYSDIEKSSISNFHESNSWL 252
                       + +  +N F     + +       L + K    +            W+
Sbjct: 384 ANEDLWITSGIPEVEIMSNAFTPAIKYHVIKKNKGQLDKVKLPKPKDPLALRSGVYPQWI 443

Query: 253 GISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN--------------EITILP 298
             S+ Y+  +  P  +        Y+       +    +                +  LP
Sbjct: 444 LNSNGYFGIILSPLTDIPAGYAASYVPGSSVPTRLSLLSPKNQAYPASKYPGYETLLPLP 503

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF----------IAKPMFM 348
            +  T    ++AG    PT+   ++     + E         F           A  +F+
Sbjct: 504 KQEGTYRFLVYAGPLAEPTLRALDQAYTNSKGESPQYLDCITFRGIFAFITEPFAALLFI 563

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           +M +F  + G++GI+I+L TVF+KLL +PL      S   M+ + P I E+++K+ +  P
Sbjct: 564 IMKFFRMITGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKY-KKEP 622

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAA 467
           +  Q  ++ LYKT+ +NP+ GC P+L+Q+P   A++ ++  S  +R A F  GWI +L A
Sbjct: 623 KRAQMEVMALYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTA 682

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL- 520
            D    +T      +++    H+   PI++ + MF Q K+S      P    + Q   + 
Sbjct: 683 PDVLFSWTTPV---WFIGNEFHL--LPILLGIVMFAQQKLSALKRKAPVTDQQRQQEAMG 737

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
             M ++F F   +FP+GL IYW  S ++ ++QQ    K+  ++  L + +  +  K 
Sbjct: 738 TMMALLFTFMFYNFPSGLNIYWFSSMLLGLIQQWATNKILDSK-HLKNEISISKKKQ 793


>gi|213022847|ref|ZP_03337294.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 346

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 81/313 (25%), Positives = 151/313 (48%), Gaps = 30/313 (9%)

Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274
               G      D+   + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  
Sbjct: 22  HTFRGAAYSTPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN-- 79

Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
           F   + G+      + A  + + PG++   T+ L+ G +    +         P  ++ +
Sbjct: 80  FYTANLGNGIVAIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTV 134

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           D+GW +FI++P+F L+ + ++ VGN+G +I++ T  V+ + +PL K QY S A M+ +QP
Sbjct: 135 DYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQP 194

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           KI  +RE+      Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+R
Sbjct: 195 KIQAMRERLGDDK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELR 253

Query: 455 HAPFWGWIKDLAAADPTNIFTLFG----------------------ILPFYLPGFMHVGI 492
           HAPF  WI DL+A DP +     G                         +    +  + +
Sbjct: 254 HAPFALWIHDLSAQDPIHSADPDGRNDVLHSEDVADHRDRPDAAEDHDLYAGHLYSVLPV 313

Query: 493 WPIIMSLSMFIQM 505
            P+     ++ Q 
Sbjct: 314 VPVRSGAVLYRQQ 326


>gi|218658398|ref|ZP_03514328.1| putative inner membrane protein translocase component YidC
           [Rhizobium etli IE4771]
          Length = 125

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 93/122 (76%)

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           F+GWIKDL+A DPT I  LFG+LPF  P  +H+G+WP+IM ++MF+QM+M+P P D  QA
Sbjct: 1   FFGWIKDLSAPDPTTIVNLFGLLPFEGPALLHLGVWPLIMGITMFVQMRMNPTPPDPTQA 60

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           MI NWMP+VF+F L+SFPAGL+IYW+W+N +S+ QQ +IMK HG +I L D L+  F + 
Sbjct: 61  MIFNWMPLVFMFMLASFPAGLVIYWAWNNTLSVAQQGLIMKRHGVKIELFDNLKGMFRRK 120

Query: 578 YN 579
             
Sbjct: 121 PA 122


>gi|226229338|ref|YP_002763444.1| inner membrane protein OxaA [Gemmatimonas aurantiaca T-27]
 gi|226092529|dbj|BAH40974.1| inner membrane protein OxaA [Gemmatimonas aurantiaca T-27]
          Length = 570

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 90/589 (15%), Positives = 200/589 (33%), Gaps = 62/589 (10%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-------------PNQ 48
                  +A+ L   ++      +   +    +                           
Sbjct: 1   MEPRRIALAVVLMAAVLILTPYLFPTAKPVPGSMAVAGDSLAADSLRDSVAAAAARVSGS 60

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLI-----GSINLKGAQFDDLNLRGYHLDVSS 103
                A     D A  L+   ++ +    +           +GA      +  Y    + 
Sbjct: 61  PIAPVAGATPADSAALLATPVQLSVDTTVVKTASADYRTTNQGAALVGATMTRYQALSNR 120

Query: 104 N---SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160
                  V L  P +   ++   +   + A + ++  +       +  + T     +L  
Sbjct: 121 GRTKEGSVELAGPGDRLLSFRLVVPGDTIALDKQIFRTAES---SNNGVSTVRYETELAA 177

Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
                     + S         V        +               +  +        +
Sbjct: 178 VAGTPRQVSISYSFQPDSYHVAVAAAVTGVPETSFLLVDLPRGFRSSEADSVEDQNHLAY 237

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
                  S     +  ++           +W    +KY+    +  K  +   +  +   
Sbjct: 238 AYKPELSSAKGVTFRSLDPGERRIEPGPLTWAVAKNKYFMLGVLTPKGGTPFLEANFT-G 296

Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF- 339
           G    +A        ++P K+       + G +EF  +    ++     FE    +G + 
Sbjct: 297 GPRVAKAATRGEATLVMPLKAGNVAFEAYVGPQEFKRLVAMGRE-----FETSNPYGGWI 351

Query: 340 -----YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
                 F    + +L+     L  ++G  +++  V V+++ +PL ++   S+  M+ IQP
Sbjct: 352 QGIVQPFATMVITLLLWMKKTLGVSYGWILVIFGVAVRIILWPLNQRAMRSSMQMQRIQP 411

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIYKVISISL 451
           ++  ++ + K   PQ LQ AM+Q+YK H ++P   L+GC P+L+ +PVFFA++ V   ++
Sbjct: 412 ELQAIQARHKG-DPQKLQAAMMQVYKEHGMSPFSSLSGCLPMLIPLPVFFALFFVFQNTI 470

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           E R    + W  D++  DP                     I PI+++++  +   +    
Sbjct: 471 EFRGVS-FLWFPDISVKDPYY-------------------IIPILVAITALVLSWLGMRG 510

Query: 512 --ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
             A++ Q M++  MP + +    +  +GL +Y+   N+ S+ QQ +I +
Sbjct: 511 IKANEQQKMMMYLMPAMMLIFFVNMASGLNLYYFIQNLASLPQQWLISR 559


>gi|320104138|ref|YP_004179729.1| membrane protein insertase, YidC/Oxa1 family [Isosphaera pallida
           ATCC 43644]
 gi|319751420|gb|ADV63180.1| membrane protein insertase, YidC/Oxa1 family [Isosphaera pallida
           ATCC 43644]
          Length = 748

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 118/681 (17%), Positives = 228/681 (33%), Gaps = 106/681 (15%)

Query: 1   MERN-WNYFVAIALSVIIVYAWQNFYV--------------YPRIEEMNNERKNIQTVKQ 45
           M      + + + L++ I+                           +   E K +    Q
Sbjct: 1   MNDQLKRFLIFLPLAMAILVFSPLVMERLGLVPPPPPPADPALAANDDAPEEKPVAKDGQ 60

Query: 46  PNQVDNSYAAVLIDDRAQALSMSPRVEL-------------KNP---SLIGSINLKGAQF 89
              +    A             +  V++              N     L   I+ +G   
Sbjct: 61  EGSMPAPPAGQPPQAEPVPPPSAADVKIWPSDELVLGSSDPDNQAGFFLKLVIDQRGGGV 120

Query: 90  DDLN--L--RGYHLDVSSNSPIVTLLSPSNTKNAY------FAELDYVSTANNIELPNSN 139
                 L    +     S  P+V +    +           F       +A +  L  SN
Sbjct: 121 VRAESALYESEHDFKGGSTGPLVLIERLEDHPAPLGLDLVRFKGASGAISAGDPSLRLSN 180

Query: 140 TVWNLISGKILTPTTPI-------KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSID 192
             W ++        TP+       +L  +     +                  +   S +
Sbjct: 181 VTWEVLPDAQGRAVTPLEDGGQELRLQTQVGQPPVTVVKTYRLRPRTDGFEHELKFVSPE 240

Query: 193 QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ----------KYSDIEKSSI 242
               + R  +    P            F     ++  VE            Y   +    
Sbjct: 241 DREIAYRLLVPYGLPVEGAWYTMTFRDFFHAGENQGQVEIATLTASDVSWYYGKGKDYQE 300

Query: 243 SNFHESNSWLGISDKYWASVFIPSKET------------SFHSQFKYLSDGHARYQAKFS 290
           +       + GI ++Y+A    P +                  +    +   +   A+  
Sbjct: 301 TYQTYPLRFTGIENRYFAVFLAPQQPNLTQADRYDQETVPLELRANPANRALSDIAAEVV 360

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTI-----------HHYEKDLAIP---RFEMLIDW 336
           +  I++   + +  T  +FAG K+   +             +    +IP        +  
Sbjct: 361 SRPISLTANQPVVHTYKVFAGPKDRDRLLAFGVPGADELAAFRAGFSIPLAGSMSKYVIS 420

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
                       +   F    GN+G+AI+L T F++L  FPL++KQ V    M+++QP I
Sbjct: 421 PLLRITYGLTESVSRLFGGTQGNYGVAIILMTCFIRLCLFPLSRKQAVMAKKMQDLQPLI 480

Query: 397 DELREKFKQSPPQVL---------QKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKV 446
            E+++K  +    +          Q+    LY  H +NP++ GC P L+Q+PV   +++ 
Sbjct: 481 KEIQDKIAKGRNLMDLSQEEKLQLQQETWALYGRHKVNPISAGCLPALIQLPVMVGLWQA 540

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
           ++ S+++R+A  + +I +LAA D    F     LPF  P F    + PI+      +QMK
Sbjct: 541 LNQSVDLRNA-TFLYIDNLAAPDMLARFPFGWDLPFLGPYF---NLLPILAVGLTLVQMK 596

Query: 507 M-SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM---KM 559
           + SPPPA+     Q  I  +M V F+F     P+GL +Y+  S++  + ++ ++    K 
Sbjct: 597 LFSPPPANPEAEMQQKIFKYMMVFFMFMFYKLPSGLGVYFITSSLWQVGERLLVNWLAKR 656

Query: 560 HGAEI-GLIDRLRSTFSKNYN 579
           +  ++  +  + R        
Sbjct: 657 NPVDVYEVERQARENPKLKPK 677


>gi|269303185|gb|ACZ33285.1| inner membrane protein [Chlamydophila pneumoniae LPCoLN]
          Length = 795

 Score =  170 bits (430), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 96/444 (21%), Positives = 180/444 (40%), Gaps = 38/444 (8%)

Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
             TP  +  ++ +  + +     +       V         +         +      + 
Sbjct: 344 SYTPHSIQLESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEIMSN 403

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
            +    +  +      SL + K   +++           W+  S+ Y+  +  P  E + 
Sbjct: 404 ASVPTIKYRVIKKNKGSLDKVKLPKVKEPLAVRRGVYPQWILNSNGYFGIILTPLSEIAS 463

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKS--------------ITTTNFLFAGAKEFPT 317
                Y+S   A  +    + +  + P                  T    ++AG    PT
Sbjct: 464 GYGSLYISGSTAPTRLSAISPKNQLYPASKYPGYETLLPLPKDAGTHRFLVYAGPLAEPT 523

Query: 318 IH------HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG----NFGIAIMLT 367
           +         EK       + +   G F FI  P   L+            ++GI+I+L 
Sbjct: 524 LKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAALLFIIMKFFKLVTGSWGISIILL 583

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427
           TVF+KLL +PL      S   M+ + P I ++++K+K   P+  Q  ++ LYKT+ +NP+
Sbjct: 584 TVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKN-EPKRAQMEIMGLYKTNKVNPI 642

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPG 486
            GC P+L+Q+P   A++ ++  S  +R A F  GWI +L A D    +     + F    
Sbjct: 643 TGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQT--SIWFIGNE 700

Query: 487 FMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLI 539
           F    + PI++ + MF+Q K++      P    + Q  ++ N M ++F     +FP+GL 
Sbjct: 701 F---HLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLN 757

Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563
           IYW  S ++ +VQQ +  K+  ++
Sbjct: 758 IYWLSSMILGVVQQWITNKILDSK 781


>gi|307565938|ref|ZP_07628397.1| membrane protein insertase, YidC/Oxa1 family [Prevotella amnii CRIS
           21A-A]
 gi|307345366|gb|EFN90744.1| membrane protein insertase, YidC/Oxa1 family [Prevotella amnii CRIS
           21A-A]
          Length = 641

 Score =  169 bits (428), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 102/613 (16%), Positives = 231/613 (37%), Gaps = 58/613 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK----NIQTVKQPNQVDNSYAAV 56
           M+   N      L  ++++ +  +    + +     ++    +I T K+  +        
Sbjct: 1   MD--KNTITGFVLMALVLFGFAWWQQPSKEQIAQQRKQFVADSIATAKKAQKDKEDSFKA 58

Query: 57  LIDDRAQALSMS-----------PRVELKNPSLIGSINLKGAQFDDLNLRGYH------L 99
               +A AL  +             + LKN ++  +++ KG       ++ Y        
Sbjct: 59  EQVKQAVALDTTKLFYEALKGKKQDIVLKNNNVALTLSSKGGVVTKAIIKNYVGHNIAVK 118

Query: 100 DVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157
           D S + P VTL   ++    +   A+ + + T +    P + T   +           + 
Sbjct: 119 DGSKDLPYVTLFDSNDQSLNFALAAKANNIETKDLYFTPTNQTDSTVTFTANAAQGKSLT 178

Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           L +K   + L   ++                  +     +        K +     F  +
Sbjct: 179 LTYKLGKDYLLHLSVKAQGVE-----------GLFSPTNNQMEVEWLDKVRQQERGFSFE 227

Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277
             +  +   KS     Y            E+  W+   ++++++V I     S  ++ K 
Sbjct: 228 NRYATLTYKKSEGGTSYLSEGAEKEETTEETTDWVAFKNQFFSAVMISKDNFSSGAKLKS 287

Query: 278 LSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
           +    +    K     +     P     +    + G  +F  +   E +     F   ++
Sbjct: 288 VPQDKSSGYLKQYEANMKTAFDPSGKKPSEFEFYFGPNDFRKLQAVEAEST---FGKNLE 344

Query: 336 WGWFYFIAKPMFMLMSYFYNL--------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
                ++  P+F +++ ++ +        +   GI ++L T+ +K + +P+ KK Y+S+A
Sbjct: 345 MQRLVYLGWPLFRIINRWFTIYVFDFLSKLFPMGIVLILITLLLKAITYPMVKKSYMSSA 404

Query: 388 NMKNIQPKIDELREKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            M+ ++PK+DE  +++     Q   Q+AM+Q+Y  + ++PL+GC P+L+Q P++ A++  
Sbjct: 405 KMRVLKPKLDEATKQYNGKEDQMKKQQAMMQMYSEYGVSPLSGCLPMLIQAPIWIAMFNF 464

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQ 504
           +  ++++R    + W+KDL+  DP   +     L         +      ++ S     Q
Sbjct: 465 VPNAIQLRGES-FLWMKDLSTYDPIVEWGHNVWLIGDHISLTCILFCAANLLYSWFTMQQ 523

Query: 505 MKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            K     +   Q  ++ +    MP+ F F  + + +GL  Y+  S   S      + +  
Sbjct: 524 QKDQMVGSQGDQMKMMQYMMLFMPLFFFFVFNDYSSGLNFYYFVSLFFSAAIMWAL-RKT 582

Query: 561 GAEIGLIDRLRST 573
             E  L+  L + 
Sbjct: 583 TNEEKLLAYLENR 595


>gi|15835845|ref|NP_300369.1| putative inner membrane protein translocase component YidC
           [Chlamydophila pneumoniae J138]
 gi|16752729|ref|NP_444996.1| putative inner membrane protein translocase component YidC
           [Chlamydophila pneumoniae AR39]
 gi|38502924|sp|Q7VQ46|OXAA_CHLPN RecName: Full=Inner membrane protein oxaA
 gi|7189370|gb|AAF38286.1| inner membrane protein, putative [Chlamydophila pneumoniae AR39]
 gi|8978684|dbj|BAA98520.1| 60 kDa inner membrane protein [Chlamydophila pneumoniae J138]
          Length = 795

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 97/444 (21%), Positives = 181/444 (40%), Gaps = 38/444 (8%)

Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
             TP  +  ++ +  + +     +       V         +         +      + 
Sbjct: 344 SYTPHSIQLESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEIMSN 403

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
            +    +  +      SL + K   +++           W+  S+ Y+  +  P  E + 
Sbjct: 404 ASAPTIKYRVIKKNKGSLDKVKLPKVKEPLAVRRGVYPQWILNSNGYFGIILTPLSEIAS 463

Query: 272 HSQFKYLSDGHARYQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPT 317
                Y+S   A  +    +                +  LP  + T    ++AG    PT
Sbjct: 464 GYGSLYISGSTAPTRLSAISPKNQLYPVSKYPGYETLLPLPKDAGTHRFLVYAGPLAEPT 523

Query: 318 IH------HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG----NFGIAIMLT 367
           +         EK       + +   G F FI  P   L+            ++GI+I+L 
Sbjct: 524 LKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAALLFIIMKFFKLVTGSWGISIILL 583

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427
           TVF+KLL +PL      S   M+ + P I ++++K+K   P+  Q  ++ LYKT+ +NP+
Sbjct: 584 TVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKN-EPKRAQMEIMGLYKTNKVNPI 642

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPG 486
            GC P+L+Q+P   A++ ++  S  +R A F  GWI +L A D    +     + F    
Sbjct: 643 TGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQT--SIWFIGNE 700

Query: 487 FMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLI 539
           F    + PI++ + MF+Q K++      P    + Q  ++ N M ++F     +FP+GL 
Sbjct: 701 F---HLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLN 757

Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563
           IYW  S ++ +VQQ +  K+  ++
Sbjct: 758 IYWLSSMILGVVQQWITNKILDSK 781


>gi|33241654|ref|NP_876595.1| putative inner membrane protein translocase component YidC
           [Chlamydophila pneumoniae TW-183]
 gi|33236163|gb|AAP98252.1| 60kDa inner membrane protein [Chlamydophila pneumoniae TW-183]
          Length = 790

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 97/444 (21%), Positives = 181/444 (40%), Gaps = 38/444 (8%)

Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
             TP  +  ++ +  + +     +       V         +         +      + 
Sbjct: 339 SYTPHSIQLESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEIMSN 398

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
            +    +  +      SL + K   +++           W+  S+ Y+  +  P  E + 
Sbjct: 399 ASAPTIKYRVIKKNKGSLDKVKLPKVKEPLAVRRGVYPQWILNSNGYFGIILTPLSEIAS 458

Query: 272 HSQFKYLSDGHARYQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPT 317
                Y+S   A  +    +                +  LP  + T    ++AG    PT
Sbjct: 459 GYGSLYISGSTAPTRLSAISPKNQLYPVSKYPGYETLLPLPKDAGTHRFLVYAGPLAEPT 518

Query: 318 IH------HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG----NFGIAIMLT 367
           +         EK       + +   G F FI  P   L+            ++GI+I+L 
Sbjct: 519 LKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAALLFIIMKFFKLVTGSWGISIILL 578

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427
           TVF+KLL +PL      S   M+ + P I ++++K+K   P+  Q  ++ LYKT+ +NP+
Sbjct: 579 TVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKN-EPKRAQMEIMGLYKTNKVNPI 637

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPG 486
            GC P+L+Q+P   A++ ++  S  +R A F  GWI +L A D    +     + F    
Sbjct: 638 TGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQT--SIWFIGNE 695

Query: 487 FMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLI 539
           F    + PI++ + MF+Q K++      P    + Q  ++ N M ++F     +FP+GL 
Sbjct: 696 F---HLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLN 752

Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563
           IYW  S ++ +VQQ +  K+  ++
Sbjct: 753 IYWLSSMILGVVQQWITNKILDSK 776


>gi|15618230|ref|NP_224515.1| putative inner membrane protein translocase component YidC
           [Chlamydophila pneumoniae CWL029]
 gi|4376587|gb|AAD18459.1| 60 kDa Inner Membrane Protein [Chlamydophila pneumoniae CWL029]
          Length = 795

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 97/444 (21%), Positives = 181/444 (40%), Gaps = 38/444 (8%)

Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
             TP  +  ++ +  + +     +       V         +         +      + 
Sbjct: 344 SYTPHSIQLESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEIMSN 403

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
            +    +  +      SL + K   +++           W+  S+ Y+  +  P  E + 
Sbjct: 404 ASAPTIKYRVIKKNKGSLDKVKLPKVKEPLAIRRGVYPQWILNSNGYFGIILTPLSEIAS 463

Query: 272 HSQFKYLSDGHARYQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPT 317
                Y+S   A  +    +                +  LP  + T    ++AG    PT
Sbjct: 464 GYGSLYISGSTAPTRLSAISPKNQLYPVSKYPGYETLLPLPKDAGTHRFLVYAGPLAEPT 523

Query: 318 IH------HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG----NFGIAIMLT 367
           +         EK       + +   G F FI  P   L+            ++GI+I+L 
Sbjct: 524 LKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAALLFIIMKFFKLVTGSWGISIILL 583

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427
           TVF+KLL +PL      S   M+ + P I ++++K+K   P+  Q  ++ LYKT+ +NP+
Sbjct: 584 TVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKN-EPKRAQMEIMGLYKTNKVNPI 642

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPG 486
            GC P+L+Q+P   A++ ++  S  +R A F  GWI +L A D    +     + F    
Sbjct: 643 TGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQT--SIWFIGNE 700

Query: 487 FMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLI 539
           F    + PI++ + MF+Q K++      P    + Q  ++ N M ++F     +FP+GL 
Sbjct: 701 F---HLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLN 757

Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563
           IYW  S ++ +VQQ +  K+  ++
Sbjct: 758 IYWLSSMILGVVQQWITNKILDSK 781


>gi|270285312|ref|ZP_06194706.1| putative inner membrane protein translocase component YidC
           [Chlamydia muridarum Nigg]
 gi|270289329|ref|ZP_06195631.1| putative inner membrane protein translocase component YidC
           [Chlamydia muridarum Weiss]
 gi|301336709|ref|ZP_07224911.1| putative inner membrane protein translocase component YidC
           [Chlamydia muridarum MopnTet14]
          Length = 785

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 86/417 (20%), Positives = 163/417 (39%), Gaps = 42/417 (10%)

Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL----GDKSLVEQKYSDIE 238
                 +   Q         +                 +           L+  K    +
Sbjct: 363 EQPYAFDLEIQTTRGQEDLWITSGVPEVEIMSNAFVPAVKYHAVKKNKSDLINVKLPKAK 422

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN------ 292
            S +     S  W+  S+ Y+  +  P           ++       +    +       
Sbjct: 423 DSLLVRNDASPQWILNSNGYFGVILTPKTPLPTGYASSFIPGNAVPTRLTQLSPKDQAYP 482

Query: 293 --------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF--- 341
                    +  LP ++      ++AG    PT+   ++     + E         F   
Sbjct: 483 ASKYPGYTAMLPLPKEAGRYQFMVYAGPLSEPTLKALDRAHTNHKGESPEYVDAIAFRGF 542

Query: 342 -------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
                   A  +F++M +F  L G++GI+I+L T+ +KL+ +PL      S   M+ + P
Sbjct: 543 FSFITEPFAALLFIIMKFFQFLTGSWGISIILLTIVLKLVLYPLNAWSIRSMRRMQKLSP 602

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
            I ++++K+ +  P+  Q  ++ LYK + +NP+ GC P+++QIP   A++ ++  S  +R
Sbjct: 603 YIQDIQQKY-KREPKRAQMEIMALYKVNKVNPITGCLPLIIQIPFLIAMFDLLKSSFLLR 661

Query: 455 HAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS----- 508
            A F  GWI +L A D    +     + F    F    + PI++ + MF Q K+S     
Sbjct: 662 GASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGIVMFAQQKISAIKRS 716

Query: 509 -PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            P    + Q   +   M ++F F   +FP+GL IYW  S ++ ++QQ    K+   +
Sbjct: 717 GPVSDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWLSSMLLGVIQQWATNKILDEK 773


>gi|15835140|ref|NP_296899.1| putative inner membrane protein translocase component YidC
           [Chlamydia muridarum Nigg]
 gi|38503223|sp|Q9PKE3|OXAA_CHLMU RecName: Full=Inner membrane protein oxaA
 gi|7190563|gb|AAF39364.1| inner membrane protein, putative [Chlamydia muridarum Nigg]
          Length = 787

 Score =  169 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 86/417 (20%), Positives = 163/417 (39%), Gaps = 42/417 (10%)

Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL----GDKSLVEQKYSDIE 238
                 +   Q         +                 +           L+  K    +
Sbjct: 365 EQPYAFDLEIQTTRGQEDLWITSGVPEVEIMSNAFVPAVKYHAVKKNKSDLINVKLPKAK 424

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN------ 292
            S +     S  W+  S+ Y+  +  P           ++       +    +       
Sbjct: 425 DSLLVRNDASPQWILNSNGYFGVILTPKTPLPTGYASSFIPGNAVPTRLTQLSPKDQAYP 484

Query: 293 --------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF--- 341
                    +  LP ++      ++AG    PT+   ++     + E         F   
Sbjct: 485 ASKYPGYTAMLPLPKEAGRYQFMVYAGPLSEPTLKALDRAHTNHKGESPEYVDAIAFRGF 544

Query: 342 -------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
                   A  +F++M +F  L G++GI+I+L T+ +KL+ +PL      S   M+ + P
Sbjct: 545 FSFITEPFAALLFIIMKFFQFLTGSWGISIILLTIVLKLVLYPLNAWSIRSMRRMQKLSP 604

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
            I ++++K+ +  P+  Q  ++ LYK + +NP+ GC P+++QIP   A++ ++  S  +R
Sbjct: 605 YIQDIQQKY-KREPKRAQMEIMALYKVNKVNPITGCLPLIIQIPFLIAMFDLLKSSFLLR 663

Query: 455 HAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS----- 508
            A F  GWI +L A D    +     + F    F    + PI++ + MF Q K+S     
Sbjct: 664 GASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGIVMFAQQKISAIKRS 718

Query: 509 -PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            P    + Q   +   M ++F F   +FP+GL IYW  S ++ ++QQ    K+   +
Sbjct: 719 GPVSDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWLSSMLLGVIQQWATNKILDEK 775


>gi|300869651|ref|YP_003784522.1| 60 kDa inner membrane insertion protein [Brachyspira pilosicoli
           95/1000]
 gi|300687350|gb|ADK30021.1| 60 kDa inner membrane insertion protein [Brachyspira pilosicoli
           95/1000]
          Length = 602

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 100/523 (19%), Positives = 208/523 (39%), Gaps = 47/523 (8%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN 131
            L+N  +I +   K        L+ Y+   S  +  +  +     +  Y   L + + +N
Sbjct: 61  TLENDYVIATF--KNGSLFSYKLKNYYKQDSEITNEIVDMVEQVYEGIYPFTLTFQNLSN 118

Query: 132 NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNS 190
           +I LPN    +++     +T      +     N I  ++T +  ++ Y      T+ N S
Sbjct: 119 SIALPNVFNYYSVKENNAVTYVADASI---EGNPIRIKKTFAFGEDPYQLTNTVTIENLS 175

Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK----------------- 233
              +       +        T    V+E             +                  
Sbjct: 176 EKDLSMYYSYFLGTGIGPYRTEKNSVREDATKAQYLIKGNGKSKVLLTGDIVKENILSKL 235

Query: 234 -----YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
                 +       S +   + W+ ++++Y+A +  P++  +      +       Y+  
Sbjct: 236 FGFGNGAKTNNVRYSIYEGQDKWVALNNRYFAIISSPAQSNAKFETMTFSRPVTNEYRND 295

Query: 289 FSA----NEITILPGKSITTTNFLFAGAKEFPTIHHY-EKDLAIPRFEMLIDWGWFYFIA 343
           F      +E  I  G S+  T  ++ G K       Y  ++     F+          + 
Sbjct: 296 FHIANLISEHNIKSGSSVVDTYSVYIGPKVRRIFSKYYLEESYESIFQESFLGLNLRPLT 355

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             + ++++  Y    ++  AI+L T+  K++ +PL    Y S   M+ + PKI+ +RE++
Sbjct: 356 YILDIILNALYGFTKSYAWAIILFTLIFKIVTYPLNHASYKSMRKMQLVNPKIERIREQY 415

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
           K +P + L   ++ +YK   INPL GC P+LL  P+  A + ++   +E+R+ P + WI 
Sbjct: 416 KDNPEK-LNAEIMNIYKKEKINPLGGCLPMLLPFPLLIAFFYLMQSMVELRNTP-FLWIT 473

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ------- 516
           DL++ D   +F     +           ++PI+M+++ ++ MK+ P  +           
Sbjct: 474 DLSSPDKLFVFPAAIPILGGFN----FNLFPILMAITSYVSMKIQPSSSAGAAGGQAAMQ 529

Query: 517 -AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
             M+    P++ +    +F +GL +YW+  NV  ++QQ +  K
Sbjct: 530 MKMMTTIFPLMMLLMFYNFASGLALYWTAQNVFGVIQQFITSK 572


>gi|159901883|gb|ABX10617.1| 60 kDa inner membrane insertion protein [uncultured planctomycete
           6N14]
          Length = 818

 Score =  166 bits (420), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 86/346 (24%), Positives = 158/346 (45%), Gaps = 34/346 (9%)

Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN-------------- 292
              S++G+  +Y+   F+P++  +  +       G A   A    +              
Sbjct: 435 RDLSYVGVDSQYFTVAFVPAEGQASLTTLDRGGAGIASDPAAIIKHQERAVNSTFYVDTL 494

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
             ++ PG S+     LFAG K    +  Y         +  I +GWF  IAK +  L+  
Sbjct: 495 SKSLEPGGSMRQDLRLFAGPKYTSLLTQY-------GLQDCIYYGWFSAIAKFLGGLLHG 547

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
               VGN+ +AI+L T+ V+   FPL++K  V+   M+ + P++ ++ EK+K    +   
Sbjct: 548 LSA-VGNYALAIILLTLLVRGCMFPLSRKAAVNAQRMQELAPEMKKINEKYKD-DMEGKL 605

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---WIKDLAAAD 469
           KA  +L +   +NPLAGC P+ +Q+P+F  +Y+ +S+++EMR  P      W  +LA  D
Sbjct: 606 KAQRELQQRVGLNPLAGCLPMFIQLPIFLGLYRTLSVNIEMRQQPALSFSDWASNLAGPD 665

Query: 470 PTNIF--TLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPPPADKGQ----AMILN 521
               +   L+  L     G++     + P+I+ +    Q K+  PPA   Q      +++
Sbjct: 666 KLAYWGDWLWEYLSGRGTGWLGPYFNVLPVIVVVLYLTQQKLFMPPATDEQTALTQKMMS 725

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
            M ++        PAGL IY+  S+   I ++ ++ +   ++    
Sbjct: 726 VMTLMMGLFFFRVPAGLCIYFITSSAWGICERIIVKRTLPSKKHFD 771


>gi|46446715|ref|YP_008080.1| putative inner membrane protein translocase component YidC
           [Candidatus Protochlamydia amoebophila UWE25]
 gi|46400356|emb|CAF23805.1| putative 60 kDa inner-membrane protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 866

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 110/642 (17%), Positives = 215/642 (33%), Gaps = 88/642 (13%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
               NY+ AIAL    +   Q +      +  +        +++ +          I+  
Sbjct: 221 NSQQNYYAAIAL----LKTSQGYLPVGFYDFTSQSLVRFNKIQELSSFIAPTQDTQINSA 276

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNL----------------------RGYHL 99
                      L+N       +  G    ++NL                      + +  
Sbjct: 277 TNGKREQKFYVLENNYQQLVFSNYGGALAEINLPFRTDENQASVVREIEFDRNMVKHHPY 336

Query: 100 ----------DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI 149
                       + +     +         Y+  L       +          +     +
Sbjct: 337 NALFPSHAYYTHAKDQGKDFIFHEKGQLGGYYPLLRRDLIQISPRKSVQIKPQHYALNIV 396

Query: 150 LTPTTPIKLVFKNANNILFERTIS-LDEHYLFKIVDTV----------TNNSIDQIRFSP 198
                  +L+++  +      T   +          +            N ++     S 
Sbjct: 397 SEYPELAELIYEVIHFDNRSITFEAVQNQRRITKTYSFGDSLQEGPYCLNLALQIDGDSR 456

Query: 199 RGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKY 258
              +    P+    + G        +      E +  D+ K + +       W+  S+ +
Sbjct: 457 GLWLTSGVPEVEWISGGPAPSLKYRITRNQKSEVEKIDLPKDASTITSIYPDWICNSNGF 516

Query: 259 WASVFIPS------------KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT--T 304
              +  P               T+  S+   +   +  YQA      +  LP KS     
Sbjct: 517 LGMILDPLKEIDPGFKIQAISGTNVPSRLIEIDQEYNLYQAANLPGYMAYLPLKSQGGLM 576

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG-----------WFYFIAKPMFMLMSYF 353
               FAG  +  T+   +   +        D+                 AK + +LM +F
Sbjct: 577 NFRFFAGPFDDETLKTIDAKYSNSETGYNPDYIACQTMHGWFTFISEPFAKFLLILMKFF 636

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           + L  ++ ++I+L TV ++L+ +PL      S   M+ I P++  ++EK+ +  P+  Q 
Sbjct: 637 HYLTNSWALSIVLLTVSLRLMLYPLNTWSTKSMVRMQQIAPQVTAIQEKY-KKDPKKAQL 695

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472
            ++ LY+   +NP +GC P+L+Q+P    ++ ++  S  +R APF  GWI DL A D   
Sbjct: 696 EIMSLYRERGVNPASGCLPLLIQMPFLIGMFDLLKSSFALRGAPFISGWIDDLTAPDVLF 755

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--------MSPPPADKGQAMIL-NWM 523
            ++    + F    F    + PI++ L MF+Q +        +S     + Q   +   M
Sbjct: 756 SWSKP--IFFIGTEF---HLLPILLGLVMFLQQRFMSSGPKDLSQMTDQQRQQRAMGTMM 810

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
            VVF     +FP+GL IYW  S ++ +VQQ  + K       
Sbjct: 811 TVVFAVMFYNFPSGLNIYWLSSMLLGMVQQWFVSKQIQKTPN 852


>gi|218677921|ref|ZP_03525818.1| putative inner membrane protein translocase component YidC
           [Rhizobium etli CIAT 894]
          Length = 240

 Score =  164 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 100/239 (41%), Positives = 145/239 (60%)

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
            QAL+ SPRV +   +L GSINL GA+ DDL L+GYH  V  +SPI+TL SP+ TK+ YF
Sbjct: 2   EQALAKSPRVVIDTAALSGSINLAGARLDDLKLKGYHETVDDSSPIITLFSPAETKDGYF 61

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181
            EL Y+ +     +P   T+W    G  LT  TP+ L + N   + F RTIS+DE Y+F 
Sbjct: 62  TELGYIGSDATGSVPGPTTLWTAPEGAKLTEKTPVTLSYTNDKGLTFTRTISVDERYMFT 121

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
           + D + N+       S  GR+MR+   T  + + + EGFI V+GD  L+E KYS +EK +
Sbjct: 122 VADKIVNSGQAPAALSSYGRVMRYNKPTTPSVYVLHEGFIGVIGDDGLIESKYSAVEKEA 181

Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
           +S    +  WLGI+DKYWA+  +P +  ++ ++F Y +DG  RYQA +  +  T+ PG+
Sbjct: 182 VSPAKSTGGWLGITDKYWAATIVPPQSAAYEAKFSYFTDGQPRYQADYKDDAFTVAPGQ 240


>gi|296435767|gb|ADH17941.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis G/9768]
 gi|296436691|gb|ADH18861.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis G/11222]
 gi|297140126|gb|ADH96884.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis G/9301]
          Length = 785

 Score =  163 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 160/371 (43%), Gaps = 38/371 (10%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
               L   K    + S +   + +  W+  S+ Y+  +  P           ++      
Sbjct: 409 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFIPGNVVP 468

Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
            +                     +  LP ++      ++AG    PT+   ++  A  + 
Sbjct: 469 TRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKALDRANANSKG 528

Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
           E         F           A  +F++M +F  L G++GI+I+L T+ +KLL +PL  
Sbjct: 529 ETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 588

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
               S   M+ + P I E+++K+ +  P+  Q  ++ LYK + +NP+ GC P+L+QIP  
Sbjct: 589 WSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 647

Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
            A++ ++  S  +R A F  GWI +L A D    +     + F    F    + PI++ +
Sbjct: 648 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 702

Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            MF Q K+S      P    + Q   +   M ++F F   +FP+GL IYW  S ++ ++Q
Sbjct: 703 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 762

Query: 553 QAVIMKMHGAE 563
           Q V  K+   +
Sbjct: 763 QWVTNKILDEK 773


>gi|76788973|ref|YP_328059.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis A/HAR-13]
 gi|237802674|ref|YP_002887868.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis B/Jali20/OT]
 gi|76167503|gb|AAX50511.1| 60 kDa inner membrane protein [Chlamydia trachomatis A/HAR-13]
 gi|231273908|emb|CAX10700.1| inner membrane protein [Chlamydia trachomatis B/Jali20/OT]
 gi|296437627|gb|ADH19788.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis G/11074]
          Length = 787

 Score =  163 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 160/371 (43%), Gaps = 38/371 (10%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
               L   K    + S +   + +  W+  S+ Y+  +  P           ++      
Sbjct: 411 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFIPGNVVP 470

Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
            +                     +  LP ++      ++AG    PT+   ++  A  + 
Sbjct: 471 TRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKALDRANANSKG 530

Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
           E         F           A  +F++M +F  L G++GI+I+L T+ +KLL +PL  
Sbjct: 531 ETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 590

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
               S   M+ + P I E+++K+ +  P+  Q  ++ LYK + +NP+ GC P+L+QIP  
Sbjct: 591 WSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 649

Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
            A++ ++  S  +R A F  GWI +L A D    +     + F    F    + PI++ +
Sbjct: 650 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 704

Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            MF Q K+S      P    + Q   +   M ++F F   +FP+GL IYW  S ++ ++Q
Sbjct: 705 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 764

Query: 553 QAVIMKMHGAE 563
           Q V  K+   +
Sbjct: 765 QWVTNKILDEK 775


>gi|255317353|ref|ZP_05358599.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis 6276s]
          Length = 785

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 160/371 (43%), Gaps = 38/371 (10%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
               L   K    + S +   + +  W+  S+ Y+  +  P           ++      
Sbjct: 409 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFIPGNVVP 468

Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
            +                     +  LP ++      ++AG    PT+   ++  A  + 
Sbjct: 469 TRLSQLPPKDQTYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKALDRANANSKG 528

Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
           E         F           A  +F++M +F  L G++GI+I+L T+ +KLL +PL  
Sbjct: 529 ETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 588

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
               S   M+ + P I E+++K+ +  P+  Q  ++ LYK + +NP+ GC P+L+QIP  
Sbjct: 589 WSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 647

Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
            A++ ++  S  +R A F  GWI +L A D    +     + F    F    + PI++ +
Sbjct: 648 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 702

Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            MF Q K+S      P    + Q   +   M ++F F   +FP+GL IYW  S ++ ++Q
Sbjct: 703 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 762

Query: 553 QAVIMKMHGAE 563
           Q V  K+   +
Sbjct: 763 QWVTNKILDEK 773


>gi|255348610|ref|ZP_05380617.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis 70]
 gi|255506828|ref|ZP_05382467.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis D(s)2923]
 gi|296434839|gb|ADH17017.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis E/150]
          Length = 785

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 159/371 (42%), Gaps = 38/371 (10%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
               L   K    + S +   + +  W+  S+ Y+  +  P           ++      
Sbjct: 409 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFILGNVVP 468

Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
            +                     +  LP ++      ++AG    PT+   ++  A  + 
Sbjct: 469 TRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKALDRANANSKG 528

Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
           E         F           A  +F++M +F  L G++GI+I+L T+ +KLL +PL  
Sbjct: 529 ETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 588

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
               S   M+ + P I E+++K  +  P+  Q  ++ LYK + +NP+ GC P+L+QIP  
Sbjct: 589 WSIRSMRRMQKLSPYIQEIQQKH-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 647

Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
            A++ ++  S  +R A F  GWI +L A D    +     + F    F    + PI++ +
Sbjct: 648 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 702

Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            MF Q K+S      P    + Q   +   M ++F F   +FP+GL IYW  S ++ ++Q
Sbjct: 703 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 762

Query: 553 QAVIMKMHGAE 563
           Q V  K+   +
Sbjct: 763 QWVTNKILDEK 773


>gi|255311052|ref|ZP_05353622.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis 6276]
          Length = 787

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 160/371 (43%), Gaps = 38/371 (10%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
               L   K    + S +   + +  W+  S+ Y+  +  P           ++      
Sbjct: 411 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFIPGNVVP 470

Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
            +                     +  LP ++      ++AG    PT+   ++  A  + 
Sbjct: 471 TRLSQLPPKDQTYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKALDRANANSKG 530

Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
           E         F           A  +F++M +F  L G++GI+I+L T+ +KLL +PL  
Sbjct: 531 ETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 590

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
               S   M+ + P I E+++K+ +  P+  Q  ++ LYK + +NP+ GC P+L+QIP  
Sbjct: 591 WSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 649

Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
            A++ ++  S  +R A F  GWI +L A D    +     + F    F    + PI++ +
Sbjct: 650 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 704

Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            MF Q K+S      P    + Q   +   M ++F F   +FP+GL IYW  S ++ ++Q
Sbjct: 705 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 764

Query: 553 QAVIMKMHGAE 563
           Q V  K+   +
Sbjct: 765 QWVTNKILDEK 775


>gi|237804596|ref|YP_002888750.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231272896|emb|CAX09807.1| inner membrane protein [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 787

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 90/371 (24%), Positives = 160/371 (43%), Gaps = 38/371 (10%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
               L   K    + S +   + +  W+  S+ Y+  +  P           ++      
Sbjct: 411 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFIPGNVVP 470

Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
            +                     +  LP ++      ++AG    PT+   ++  A  + 
Sbjct: 471 TRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKALDRANANSKG 530

Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
           E         F           A  +F++M +F  L G++GI+I+L T+ +KLL +PL  
Sbjct: 531 ETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 590

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
               S   M+ + P I E+++K+ +  P+  Q  ++ LYK + +NP+ GC P+L+QIP  
Sbjct: 591 WSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 649

Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
            A++ ++  S  +R A F  GWI +L A D    +     + F    F    + PI++ +
Sbjct: 650 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 704

Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            MF Q K+S      P    + Q   +   M ++F F   +FP+GL IYW  S ++ +VQ
Sbjct: 705 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVVQ 764

Query: 553 QAVIMKMHGAE 563
           Q V  K+   +
Sbjct: 765 QWVTNKILDEK 775


>gi|255503150|ref|ZP_05381540.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis 70s]
 gi|289525290|emb|CBJ14766.1| inner membrane protein [Chlamydia trachomatis Sweden2]
 gi|296438559|gb|ADH20712.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis E/11023]
          Length = 787

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 159/371 (42%), Gaps = 38/371 (10%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
               L   K    + S +   + +  W+  S+ Y+  +  P           ++      
Sbjct: 411 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFILGNVVP 470

Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
            +                     +  LP ++      ++AG    PT+   ++  A  + 
Sbjct: 471 TRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKALDRANANSKG 530

Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
           E         F           A  +F++M +F  L G++GI+I+L T+ +KLL +PL  
Sbjct: 531 ETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 590

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
               S   M+ + P I E+++K  +  P+  Q  ++ LYK + +NP+ GC P+L+QIP  
Sbjct: 591 WSIRSMRRMQKLSPYIQEIQQKH-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 649

Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
            A++ ++  S  +R A F  GWI +L A D    +     + F    F    + PI++ +
Sbjct: 650 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 704

Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            MF Q K+S      P    + Q   +   M ++F F   +FP+GL IYW  S ++ ++Q
Sbjct: 705 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 764

Query: 553 QAVIMKMHGAE 563
           Q V  K+   +
Sbjct: 765 QWVTNKILDEK 775


>gi|15604972|ref|NP_219756.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis D/UW-3/CX]
 gi|38502864|sp|O84253|OXAA_CHLTR RecName: Full=Inner membrane protein oxaA
 gi|3328662|gb|AAC67844.1| 60kDa Inner Membrane Protein [Chlamydia trachomatis D/UW-3/CX]
 gi|297748381|gb|ADI50927.1| 60 kDa inner membrane protein YIDC [Chlamydia trachomatis D-EC]
 gi|297749261|gb|ADI51939.1| 60 kDa inner membrane protein YIDC [Chlamydia trachomatis D-LC]
          Length = 787

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 88/323 (27%), Positives = 149/323 (46%), Gaps = 24/323 (7%)

Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318
           +AS FIP              D             +  LP ++      ++AG    PT+
Sbjct: 459 YASSFIPGNVVPTRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTL 518

Query: 319 HHYEKDLAIPRFEMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTT 368
              ++  A  + E         F           A  +F++M +F  L G++GI+I+L T
Sbjct: 519 KALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLT 578

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428
           + +KLL +PL      S   M+ + P I E+++K+ +  P+  Q  ++ LYK + +NP+ 
Sbjct: 579 IVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPIT 637

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGF 487
           GC P+L+QIP   A++ ++  S  +R A F  GWI +L A D    +     + F    F
Sbjct: 638 GCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF 695

Query: 488 MHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLII 540
               + PI++ + MF Q K+S      P    + Q   +   M ++F F   +FP+GL I
Sbjct: 696 ---HLLPILLGVVMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNI 752

Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563
           YW  S ++ ++QQ V  K+   +
Sbjct: 753 YWFSSMLLGVIQQWVTNKILDEK 775


>gi|327405480|ref|YP_004346318.1| Membrane protein oxaA [Fluviicola taffensis DSM 16823]
 gi|327320988|gb|AEA45480.1| Membrane protein oxaA [Fluviicola taffensis DSM 16823]
          Length = 649

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 96/641 (14%), Positives = 226/641 (35%), Gaps = 84/641 (13%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-------- 52
           M+   N  + + L   ++  +         E    +++  +   Q  +  +S        
Sbjct: 1   MD--RNTVIGLTLIGALLVVFTYMSQPSEKEVQAKQKEQKELALQAKKEADSLDKEAKNK 58

Query: 53  --------------------------------YAAVLIDDRAQALSMSPRVELKNPSLIG 80
                                                +      +S    V L++  LI 
Sbjct: 59  PRLVAKKDKDGNQIKDEKGGLVYVNQVTKGDTTIVPRVKVPTTVISKGEIVRLESEKLIV 118

Query: 81  SINLKGAQFDDLNLRGYH-----LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135
             + KG     + L+ +               + L    + KN        +      + 
Sbjct: 119 DFSTKGGVVSAVQLKEFESYMNFAKNDGKITPLYLFKDGDQKN------QLIFNIAGNKY 172

Query: 136 PNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIR 195
              N  + ++S           +      +I++   +       + I     N  +    
Sbjct: 173 ATGNKEFEIVSKSKHKVVFRHDV---AEGSIIYTYNLKGGYDLGYTIQLKDLNGKVLPNS 229

Query: 196 FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGIS 255
                ++   +   +      Q     +  + +  +  ++     S         W+   
Sbjct: 230 VMLDWQMEMLR---SERLLSEQRKVSTICYESADGKLDWNSEVAESYKTAETDMKWVAYK 286

Query: 256 DKYWASVFIPSKETSFH------SQFKYLSDGHARYQAKFSANEITILPG-KSITTTNFL 308
             Y++S+                + +K  S     +  K+ +     +   K    +   
Sbjct: 287 QSYFSSILNADNGFKVKGTKFTSTNYKEGSKEFFTHIRKYRSKLNLGMQSVKDGKASFSW 346

Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA-KPMFMLMSYFYNLVGNFGIAIMLT 367
           + G  ++  +  Y +D       + + WG F +I    +  + ++F NL  N G+AI+L 
Sbjct: 347 YFGPNDYHVLASYNQDYDDI---LNLGWGVFRWINLYAVQPVFTFFMNLGINAGLAILLL 403

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA-MIQLYKTHNINP 426
           T+ +KL+  P+  K +VS+A MK ++P+ID++  K+ +    + ++  M+ LY+    +P
Sbjct: 404 TIILKLVLMPVQWKMFVSSAKMKILKPQIDDINAKYPKKEDAMKKQMDMMALYRASGASP 463

Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486
           LAGC P+L Q+P+  A+++    + ++R    + W +DL++ D  +I+     +P Y   
Sbjct: 464 LAGCVPMLFQMPILLAVFRFFPATFDLRQRG-FLWAEDLSSFD--SIWDFGTYIPLYGN- 519

Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL-------SSFPAGLI 539
             HV ++ ++M+ +  +   ++     + Q   +  M ++            +++ +GL 
Sbjct: 520 --HVSLFTLLMAGTTLLYTHLNSSNMTQQQQPGMPNMKIIMYMFPFMMIFFFNNYSSGLS 577

Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            Y+  S +++I+   VI K    E  L  ++    + +   
Sbjct: 578 YYYFISTLMTIILMFVIKKFFVNEEKLKAKMAEAQTNSAKK 618


>gi|158319055|ref|YP_001511563.1| 60 kDa inner membrane insertion protein [Frankia sp. EAN1pec]
 gi|158114460|gb|ABW16657.1| 60 kDa inner membrane insertion protein [Frankia sp. EAN1pec]
          Length = 461

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 31/235 (13%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
              +  +++L  + V++L FPL  KQ  S   M+ +QP+I E++EK+     Q+    ++
Sbjct: 29  FFAWAFSVVLLVICVRILIFPLFVKQVKSQRTMQMMQPRIKEIKEKYGHDKQQMQL-EIM 87

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH--------------------- 455
           +L K H  NPL GC PILLQIP+F +++ V +    M                       
Sbjct: 88  KLQKEHG-NPLLGCLPILLQIPLFISLFHVFTHLAPMNEGPGGSLVWRPRVGLSADQVEQ 146

Query: 456 -APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---P 511
            A    W   L+ +  ++  +L  +        +   +  ++M  + F   +       P
Sbjct: 147 IASAKLWGISLSNSFGSSQESLDFLGANGTHAKILAVVLIVLMGATTFFTQRQIMARTGP 206

Query: 512 ADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            D  QAM+   +    P++       FP  +++YW  +N+ S+ QQ  ++K    
Sbjct: 207 VDPQQAMVQKILLYGSPLMLAIFGFRFPIAVLLYWLTTNLWSMGQQFFVIKKMPP 261


>gi|301335721|ref|ZP_07223965.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis L2tet1]
          Length = 785

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 158/366 (43%), Gaps = 38/366 (10%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
               L   K    + S +   + +  W+  S+ Y+  +  P           ++      
Sbjct: 409 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFIPGNVVP 468

Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
            +                     +  LP ++      ++AG    PT+   ++  A  + 
Sbjct: 469 TRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKTLDRANANSKG 528

Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
           E         F           A  +F++M +F  L G++GI+I+L T+ +KLL +PL  
Sbjct: 529 ETPEYIDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 588

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
               S   M+ + P I E+++K+ +  P+  Q  ++ LYK + +NP+ GC P+L+QIP  
Sbjct: 589 WSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 647

Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
            A++ ++  S  +R A F  GWI +L A D    +     + F    F    + PI++ +
Sbjct: 648 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 702

Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            MF Q K+S      P    + Q   +   M ++F F   +FP+GL IYW  S ++ ++Q
Sbjct: 703 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 762

Query: 553 QAVIMK 558
           Q V  K
Sbjct: 763 QWVTNK 768


>gi|166154462|ref|YP_001654580.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis 434/Bu]
 gi|166155337|ref|YP_001653592.1| putative inner membrane protein translocase component YidC
           [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|165930450|emb|CAP03943.1| inner membrane protein [Chlamydia trachomatis 434/Bu]
 gi|165931325|emb|CAP06897.1| inner membrane protein [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 787

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 158/366 (43%), Gaps = 38/366 (10%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284
               L   K    + S +   + +  W+  S+ Y+  +  P           ++      
Sbjct: 411 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFIPGNVVP 470

Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
            +                     +  LP ++      ++AG    PT+   ++  A  + 
Sbjct: 471 TRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKTLDRANANSKG 530

Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
           E         F           A  +F++M +F  L G++GI+I+L T+ +KLL +PL  
Sbjct: 531 ETPEYIDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 590

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
               S   M+ + P I E+++K+ +  P+  Q  ++ LYK + +NP+ GC P+L+QIP  
Sbjct: 591 WSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 649

Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
            A++ ++  S  +R A F  GWI +L A D    +     + F    F    + PI++ +
Sbjct: 650 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 704

Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            MF Q K+S      P    + Q   +   M ++F F   +FP+GL IYW  S ++ ++Q
Sbjct: 705 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 764

Query: 553 QAVIMK 558
           Q V  K
Sbjct: 765 QWVTNK 770


>gi|217033106|ref|ZP_03438570.1| hypothetical protein HPB128_27g13 [Helicobacter pylori B128]
 gi|216945179|gb|EEC23870.1| hypothetical protein HPB128_27g13 [Helicobacter pylori B128]
          Length = 173

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 70/192 (36%), Positives = 111/192 (57%), Gaps = 21/192 (10%)

Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
            VS   +K + PK+ EL+EK+K   PQ LQ  M+QLYK H  NPL GC P++LQIPVFFA
Sbjct: 1   MVSMQKLKELAPKMKELQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFA 59

Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           IY+V+  ++E++ + +  WI DL+  DP                     I P++M  SM+
Sbjct: 60  IYRVLYNAVELKSSEWILWIHDLSIMDPYF-------------------ILPLLMGASMY 100

Query: 503 IQMKMSP-PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
               ++P    D  QA I  ++P++F   L +FPAGL++YW+ +N++S++QQ +I K+  
Sbjct: 101 WHQSVTPNTMTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILE 160

Query: 562 AEIGLIDRLRST 573
            +  +  + +  
Sbjct: 161 NKKRMHAQNKKE 172


>gi|221633069|ref|YP_002522294.1| inner membrane protein oxaA [Thermomicrobium roseum DSM 5159]
 gi|221155473|gb|ACM04600.1| inner membrane protein oxaA [Thermomicrobium roseum DSM 5159]
          Length = 312

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 79/233 (33%), Positives = 116/233 (49%), Gaps = 31/233 (13%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
              +      +   ++    + G+ G+AI+L T+ +K L  PL  K   ST  M+ +QPK
Sbjct: 1   MIIWDQFVYAIEWGLARTAEVTGSAGLAIILFTILIKTLLLPLTIKSVRSTKAMQELQPK 60

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLE 452
           I EL++K+     Q L   M++LY+ H INP++GC P+LLQIPVFF +Y  I     S  
Sbjct: 61  IRELQKKY-GQDRQRLSAEMMKLYQEHGINPMSGCLPMLLQIPVFFGLYFAIRNLSLSQV 119

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
              A  + WI DLA  DP +                   I PI+  L  FIQ +M+ P  
Sbjct: 120 GAWAHGFLWIPDLAKPDPLH-------------------ILPILAGLFQFIQTRMTRPAG 160

Query: 513 -----DKGQAMI---LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
                D  Q M+   + +MP++ V    +F AG ++YW  S V S+VQQ +I 
Sbjct: 161 VRRFEDPQQQMMYSMMLFMPLMVVLFGWNFAAGPVLYWVVSAVYSVVQQWLIT 213


>gi|147679254|ref|YP_001213469.1| preprotein translocase subunit YidC [Pelotomaculum
           thermopropionicum SI]
 gi|146275351|dbj|BAF61100.1| preprotein translocase subunit YidC [Pelotomaculum
           thermopropionicum SI]
          Length = 222

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 25/229 (10%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLV-----GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
              F  I   M  L+++ Y L       ++GIAI+L T+ VK++ +PL+ KQ  S   M+
Sbjct: 1   MEIFSSIVNGMTWLLNWLYQLTVAAGLPSYGIAIILLTIIVKMVLYPLSHKQMKSMLAMQ 60

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            IQPK+ E++EK+K   P+ +Q+A+++LY+ HN+NP AGC P+L+Q+P+  A+Y+ +   
Sbjct: 61  QIQPKVKEIQEKWKNKDPKKMQQAIMELYREHNVNPAAGCLPLLIQMPILIALYRSLFNF 120

Query: 451 LEMRHAP-FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
             +  A   + W+ +L+  DP                     I PI+  ++ F+Q KM+ 
Sbjct: 121 PYINTAHAVFLWVPNLSVKDPYY-------------------ILPILAGVTTFLQSKMTT 161

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
             +D  Q M+L  MPV   +   S PAGL +YW   N+  IVQQ  I K
Sbjct: 162 TTSDPTQRMMLYTMPVFIAWIAGSVPAGLALYWVVFNIGGIVQQYFINK 210


>gi|288916713|ref|ZP_06411088.1| 60 kDa inner membrane insertion protein [Frankia sp. EUN1f]
 gi|288351968|gb|EFC86170.1| 60 kDa inner membrane insertion protein [Frankia sp. EUN1f]
          Length = 476

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 32/236 (13%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
              + ++++L  + V++L FPL  KQ  S   M+ +QP+I E++EK+     Q+    ++
Sbjct: 29  FFAWALSVILLVICVRILIFPLFVKQVKSQRTMQMMQPRIKEIKEKYGHDKQQMQL-EIM 87

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW----------------- 459
           +L K H  NPL GC PILLQIP+F +++ V +    M   P                   
Sbjct: 88  KLQKEHG-NPLLGCLPILLQIPLFISLFHVFTHLAPMNEGPGGSLVWRPRVGLSADQVEQ 146

Query: 460 -----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP----P 510
                 W   L++   ++   L  +    +   +   +  + M ++ F+  +        
Sbjct: 147 IATAKLWGISLSSKFTSSPDFLDFLGANGMHTKILAVVLIVTMGVTTFLTQRQIMNRAGT 206

Query: 511 PADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
             D  QAM+   +    P++       FP  +++YW  +N+ S+ QQ  +++    
Sbjct: 207 AVDPQQAMVQKILLYGSPLMLAIFGFRFPIAVLLYWLTTNLWSLGQQFFVIRKMPP 262


>gi|262340996|ref|YP_003283851.1| putative inner membrane protein translocase component YidC
           [Blattabacterium sp. (Blattella germanica) str. Bge]
 gi|262272333|gb|ACY40241.1| putative inner membrane protein translocase component YidC
           [Blattabacterium sp. (Blattella germanica) str. Bge]
          Length = 580

 Score =  158 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 108/526 (20%), Positives = 210/526 (39%), Gaps = 30/526 (5%)

Query: 73  LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN-SPIVTLLSPSNTKNAYFAELDYVSTAN 131
           L+N  L   I+  G   +++ L+ Y    +S       L    N+   Y          N
Sbjct: 67  LENNVLRLKISNVGGMINEVLLKKYKAYDASLLHHSKNLFLIKNSSFLYKMSFSNKKGLN 126

Query: 132 NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF---ERTISLDEHYLFKIVDTVTN 188
                     +   + K       ++      N   F     TI  +  Y         N
Sbjct: 127 IDTTNLLFQPFLFENQKKRIQILIMRAKNPYGNGKGFLDYIYTIGKNNQYDIGFSVRTIN 186

Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES 248
               +   S          +   N           + +K+ V  K+   +K+  +N   +
Sbjct: 187 FYPFKKLVSINLEQKILSLEKDRNWENSYTQVYYSVLNKNSVSVKHLSEKKTEETNI-SN 245

Query: 249 NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL 308
            +W+    +++AS+F+P K+                 +       +     + I  +   
Sbjct: 246 MNWIAHKQQFFASIFVPEKKFQNIFVRSENFSSGNSLKNIQFKTLMNANKNEEIHFSFRF 305

Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIM 365
           + G  +F  +  Y+       FE +I +GW    +       ++  +      N+G+ I+
Sbjct: 306 YFGPLDFNLLKGYKN-----GFENIIPFGWGFLKWINKYFFLIIFQFLEQTSLNYGVIII 360

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-VLQKAMIQLYKTHNI 424
           L T  VKL+ +P+  KQY  +A MK I+P+++EL  K+K +      QKAM++LYK   I
Sbjct: 361 LMTFVVKLILYPITYKQYKLSAIMKLIRPEVEELNNKYKNNEDAFKKQKAMMELYKKVGI 420

Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484
           NP++GC   L QIP+F++++K     L +R    + W++DL + D  +I  L   +PFY 
Sbjct: 421 NPMSGCISTLFQIPIFYSLFKFFPTLLNLRGKS-FLWVEDLTSYD--SILELPFFIPFYG 477

Query: 485 PGFMHVGIWPIIMSLSMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSF 534
               H+ +  ++ +L++ +  K+          +        + IL  MPV+ +  ++S+
Sbjct: 478 N---HISLLTLLYALALLVYTKLSNNEKKDISQNENGTIPDMSFILYLMPVIMLLFINSY 534

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            + L +Y+  SN+I+I     I +    E  ++ +++        +
Sbjct: 535 ASALSLYYFTSNIINIGFLFFIKEFMLDEKKILIKIQENKINIKKT 580


>gi|289803256|ref|ZP_06533885.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           AG3]
          Length = 133

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 20/147 (13%)

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               Q   + M+ LYK   +NPL GC+P+++Q+P+F A+Y ++  S+E+RHAPF  WI D
Sbjct: 6   GDDKQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHD 65

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523
           L+A DP                     I PI+M ++MF   KMSP    D  Q  I+ +M
Sbjct: 66  LSAQDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFM 106

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISI 550
           PV+F      FP+GL++Y+  SN+++I
Sbjct: 107 PVIFTVFFLWFPSGLVLYYIVSNLVTI 133


>gi|86743220|ref|YP_483620.1| 60 kDa inner membrane insertion protein [Frankia sp. CcI3]
 gi|86570082|gb|ABD13891.1| 60 kDa inner membrane insertion protein [Frankia sp. CcI3]
          Length = 462

 Score =  157 bits (395), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 107/270 (39%), Gaps = 31/270 (11%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
             + L        +         +  +   ++  +++L  V V++L FPL  KQ  S   
Sbjct: 1   MLDPLYHLAANAIVFFHRGFAPIFGADSFFSWAFSVVLLVVCVRILIFPLFVKQVKSQRT 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QP+I E+REK        +Q+ M+ L + H  NPL GC PI LQIP+F +++ V +
Sbjct: 61  MQMMQPRIKEIREKH-GHDKPRMQQEMMALQREHG-NPLLGCLPIFLQIPLFISLFHVFT 118

Query: 449 ISLEMRHAPF--WGWIK--------------------DLAAADPTNIFTLFGILPFYLPG 486
               M   P     W                       LA+   ++      +       
Sbjct: 119 HLAPMNEGPNHSLVWRPRVGLSADQVEQIASAKVFGISLASKFTSDGDFSHFLGVDSTHV 178

Query: 487 FMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNWM----PVVFVFALSSFPAGLI 539
            +   +  ++M L+ F+  +       P D  QAM+   +    P++  F    FP  ++
Sbjct: 179 RILAIVLIVLMGLTTFLTQRQIMARTGPLDPQQAMVQKALLYGSPLMLAFFGFRFPIAVL 238

Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           +YW  +N+ S+ QQ  IMK           
Sbjct: 239 LYWLTTNLWSMGQQFFIMKKMPPIKPADAN 268


>gi|317123172|ref|YP_004103175.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter
           marianensis DSM 12885]
 gi|315593152|gb|ADU52448.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter
           marianensis DSM 12885]
          Length = 224

 Score =  156 bits (394), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 117/223 (52%), Gaps = 24/223 (10%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
              + +    +   + +   + G+ G++I+L TV V+L+  PL   Q  S   M+ +QP+
Sbjct: 2   SQLWQWFVGAIETGLEWSRAVTGSAGLSIILFTVLVRLVLLPLTISQMRSMQRMQALQPE 61

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           ++ +++K++ +P Q   +A+++L++ +N+NP +GC P+L+Q P+ +A++  +        
Sbjct: 62  VERIQKKYRDNP-QKANEAIMKLWRENNVNPASGCLPLLVQFPILYALFLALRTF----S 116

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           +  + WI DL A DP                   + I P++  ++ + QMK S       
Sbjct: 117 SGAFLWIPDLRARDP-------------------LSILPVLAGVTTYFQMKTSMTTVQPQ 157

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           Q  +L  MP +  F   SFPAGL +YW  SN+ SIVQQ V+ +
Sbjct: 158 QRTMLVLMPAMLTFFAWSFPAGLALYWVTSNLFSIVQQVVLNR 200


>gi|218515055|ref|ZP_03511895.1| putative inner membrane protein translocase component YidC
           [Rhizobium etli 8C-3]
          Length = 162

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 79/135 (58%), Positives = 105/135 (77%), Gaps = 1/135 (0%)

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           NMK +QPK++EL+ KF       LQ+A +QLYK   INP+AGCWP+ LQIP+FF++YKVI
Sbjct: 1   NMKRMQPKMEELKAKFGD-DRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVI 59

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
            I++EMRHAPF+GWI+DL+A DPT I  LFG+LPF  P F+H+G+WP+IM ++MF+QM+M
Sbjct: 60  YITIEMRHAPFFGWIQDLSAPDPTTIVNLFGLLPFTAPTFLHLGVWPLIMGVTMFLQMRM 119

Query: 508 SPPPADKGQAMILNW 522
           +P P D  QAMI   
Sbjct: 120 NPTPPDPTQAMIFKL 134


>gi|21222290|ref|NP_628069.1| putative inner membrane protein translocase component YidC
           [Streptomyces coelicolor A3(2)]
 gi|38502851|sp|O54569|OXAA_STRCO RecName: Full=Membrane protein oxaA
 gi|6539748|gb|AAF16008.1|AF187159_8 Orf431 [Streptomyces coelicolor A3(2)]
 gi|2898107|gb|AAC03487.1| inner membrane protein [Streptomyces coelicolor A3(2)]
 gi|4808379|emb|CAB42700.1| putative membrane protein [Streptomyces coelicolor A3(2)]
          Length = 431

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 24/262 (9%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
           D     F  +     +  +         +  +    +G++I+   + +++   PL  KQ 
Sbjct: 2   DTIASLFSFITWPVSWVIVQFHTVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQI 61

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            +T  M+ +QP++ +++E++K    Q   + M++LYK    NPL+ C PIL Q P FFA+
Sbjct: 62  KATRGMQTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFAL 120

Query: 444 YKVISI-------------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
           Y V++               LE            LAA        +  +        +  
Sbjct: 121 YHVLNGIASGDTIGKINQPLLESAQKAHIFGAP-LAAKFTDGASKVESLGASLTDVRVIT 179

Query: 491 GIWPIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIY 541
            +  ++MS S F   +             P  + Q M++   PV+F     +FP G+++Y
Sbjct: 180 AVMIVLMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVY 239

Query: 542 WSWSNVISIVQQAVIMKMHGAE 563
           W  +NV ++ QQ  +++ +   
Sbjct: 240 WLTTNVWTMGQQMYVIRNNPTP 261


>gi|256786609|ref|ZP_05525040.1| putative inner membrane protein translocase component YidC
           [Streptomyces lividans TK24]
 gi|289770501|ref|ZP_06529879.1| membrane protein oxaA [Streptomyces lividans TK24]
 gi|289700700|gb|EFD68129.1| membrane protein oxaA [Streptomyces lividans TK24]
          Length = 431

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 24/262 (9%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
           D     F  +     +  +         +  +    +G++I+   + +++   PL  KQ 
Sbjct: 2   DTIASLFSFITWPVSWVIVQFHTVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQI 61

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            +T  M+ +QP++ +++E++K    Q   + M++LYK    NPL+ C PIL Q P FFA+
Sbjct: 62  KATRGMQTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFAL 120

Query: 444 YKVISI-------------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
           Y V++               LE            LAA        +  +        +  
Sbjct: 121 YHVLNGIASGDTIGKINQPLLESAQKAHIFGAP-LAAKFTDGASKVESLGASLTDVRVIT 179

Query: 491 GIWPIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIY 541
            +  ++MS S F   +             P  + Q M++   PV+F     +FP G+++Y
Sbjct: 180 AVMIVLMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVY 239

Query: 542 WSWSNVISIVQQAVIMKMHGAE 563
           W  +NV ++ QQ  +++ +   
Sbjct: 240 WLTTNVWTMGQQMYVIRNNPTP 261


>gi|313902790|ref|ZP_07836187.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466910|gb|EFR62427.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter
           subterraneus DSM 13965]
          Length = 219

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 24/224 (10%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
              + +    +   +    +  G+ G++I+L TV V+L+  PL   Q  S   M+ +QP+
Sbjct: 2   SQLWQWFVDLIEAGLELSRSATGSAGLSIILFTVLVRLVLLPLTFSQTRSMQRMQALQPE 61

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           ++ +++K+K +P Q   +A++QL++ +N+NP AGC P+L+Q P+ +A++           
Sbjct: 62  VERIQKKYKNNP-QKANEAIMQLWRENNVNPAAGCLPLLIQFPILYALFIAFRDF----S 116

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
              + WI DL   DP                     + P++  ++ + QMK S       
Sbjct: 117 IGSFLWIPDLGKPDPWF-------------------VLPVLAGVTTYFQMKTSMTTVQPQ 157

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           Q  +L  MP +  F   SFPAGL +YW  SN+ SIVQQ ++ + 
Sbjct: 158 QRTMLVLMPAMLTFFAWSFPAGLALYWVTSNIFSIVQQVLMNRR 201


>gi|284034939|ref|YP_003384870.1| 60 kDa inner membrane insertion protein [Kribbella flavida DSM
           17836]
 gi|283814232|gb|ADB36071.1| 60 kDa inner membrane insertion protein [Kribbella flavida DSM
           17836]
          Length = 412

 Score =  155 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/248 (25%), Positives = 115/248 (46%), Gaps = 38/248 (15%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
             + ++I   T+ ++ L  PL  +Q  S+ NM+ +QPK+ EL++K+     + L + M++
Sbjct: 52  WAWALSIAGLTIVIRTLLIPLFVRQIRSSRNMQLLQPKMKELQKKY-GHDREKLGQEMMK 110

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISL--------------EMRHAPFWGWIK 463
           LYK    NP + C P+LLQ PVF A+++V+  +                +RHA  +G   
Sbjct: 111 LYKETGTNPFSSCLPLLLQSPVFLALFRVLDGASKGEAHSSIIAPHVNSLRHAKIFG--- 167

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQM----KMSPP------P 511
                    I   F          + +   +  I+M+ +MFI      + + P       
Sbjct: 168 -------AEISQTFLRANGDGSTNVKIVAIVLIILMTATMFITQLQLMRKNMPKEALEGQ 220

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-IGLIDRL 570
           A + Q ++L   P+ F+    +FP G++IYW  SNV ++ QQ  +++ + A      D +
Sbjct: 221 AAQMQKIMLYVFPIFFLIGGFNFPIGVLIYWFVSNVWTMGQQFYVIRRNPAPGTPAFDAM 280

Query: 571 RSTFSKNY 578
            +   ++ 
Sbjct: 281 EARKREHN 288


>gi|55980412|ref|YP_143709.1| hypothetical protein TTHA0443 [Thermus thermophilus HB8]
 gi|55771825|dbj|BAD70266.1| putative membrane protein [Thermus thermophilus HB8]
          Length = 430

 Score =  154 bits (388), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 70/222 (31%), Positives = 118/222 (53%), Gaps = 26/222 (11%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  ++  +  +M   Y   GN+G+AI+  T+ V+LL +PL  +Q+ S A ++ +QP I +
Sbjct: 228 WGQLSLGLLWIMEAAYRFTGNWGLAILFLTLVVRLLLWPLMHQQFKSMAEIQRLQPLIQK 287

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           + EK+K  P +   +A ++LY+ H +NP AGC P+L+Q+P+ F ++KVI+   E      
Sbjct: 288 INEKYKDDPNKR-AEATMKLYQEHRVNPAAGCLPLLIQMPILFILWKVIAN-YEFGQ--G 343

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQA 517
           + WI DLA  DP                     I P++   S F+   +S     D  + 
Sbjct: 344 FLWIPDLALPDPYY-------------------ILPVLYVASTFLSTWLSAHGNRDLIRQ 384

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
               +M ++FVF +  FP+G+ +YW  S +I +VQQ +I K 
Sbjct: 385 S--LFMNLIFVFLVLQFPSGVTLYWVLSTLIGLVQQWLINKS 424


>gi|296131544|ref|YP_003638794.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas
           flavigena DSM 20109]
 gi|296023359|gb|ADG76595.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas
           flavigena DSM 20109]
          Length = 384

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 65/275 (23%), Positives = 125/275 (45%), Gaps = 27/275 (9%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F +++   W       +             +G++I+   + +++L  PL  KQ  ++  M
Sbjct: 9   FPLMVVVAWIMVRFHELLTWAGLDATSGAAWGLSIVGLVIVMRILLIPLFFKQIKASRGM 68

Query: 390 KNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + +QP++  L++K+K        + + + M++LY+ H  NP A C PILLQ P+FFA+++
Sbjct: 69  QLVQPEMQALQKKYKGKSDPASREAMSREMMELYRKHGTNPFASCLPILLQSPIFFALFR 128

Query: 446 VISISLEMR-----HAPFWGWIK-DLAAA-DPTNIFTLFGILPF-----YLPGFMHVGIW 493
           V+     +       A   G +  +LAA  +   I+       F      +   +   I 
Sbjct: 129 VLFELPRLAAGTYERADAIGPMTRELAAQAEAATIWGAPLSGTFLKADGNVHIQIVTVIL 188

Query: 494 PIIMSLSMFIQMKM----SPPP-----ADKGQAMILNWM-PVVFVFALSSFPAGLIIYWS 543
            I MS++ F   +     + PP         Q  IL +M P++F F+  +FP G+++YW+
Sbjct: 189 IIAMSVTTFTTQRQLTMKNMPPAALEGPMAQQQKILLYMLPLIFAFSGVNFPIGVLLYWT 248

Query: 544 WSNVISIVQQAVIMKMHGAE-IGLIDRLRSTFSKN 577
            +N+ S+ QQ   ++   A        L+   ++ 
Sbjct: 249 TTNLWSMGQQFYTIRRMPAPGSEAEKALKERQARK 283


>gi|46198383|ref|YP_004050.1| hypothetical protein TTC0075 [Thermus thermophilus HB27]
 gi|46196005|gb|AAS80423.1| probable membrane protein [Thermus thermophilus HB27]
          Length = 430

 Score =  153 bits (387), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 70/222 (31%), Positives = 118/222 (53%), Gaps = 26/222 (11%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  ++  +  +M   Y   GN+G+AI+  T+ V+LL +PL  +Q+ S A ++ +QP I +
Sbjct: 228 WGQLSLGLLWIMEAAYRFTGNWGLAILFLTLVVRLLLWPLMHQQFKSMAEIQRLQPLIQK 287

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           + EK+K  P +   +A ++LY+ H +NP AGC P+L+Q+P+ F ++KVI+   E      
Sbjct: 288 INEKYKDDPNKR-AEATMKLYQEHRVNPAAGCLPLLIQMPILFILWKVIAN-YEFGQ--G 343

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQA 517
           + WI DLA  DP                     I P++   S F+   +S     D  + 
Sbjct: 344 FLWIPDLALPDPYY-------------------ILPVLYVASTFLSTWLSAHGNRDLIRQ 384

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
               +M ++FVF +  FP+G+ +YW  S +I +VQQ +I K 
Sbjct: 385 S--LFMNLIFVFLVLQFPSGVTLYWVLSTLIGLVQQWLINKS 424


>gi|290959008|ref|YP_003490190.1| hypothetical protein SCAB_45861 [Streptomyces scabiei 87.22]
 gi|260648534|emb|CBG71645.1| putative membrane protein [Streptomyces scabiei 87.22]
          Length = 421

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 24/247 (9%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  +         +  +    +G++I+   + +++   PL  KQ  +T  M+ +QP++ +
Sbjct: 17  WVIVQFHTVYGAVFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKK 76

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI----------- 447
           ++E++K    Q   + M++LYK    NPL+ C PIL Q P FFA+Y V+           
Sbjct: 77  IQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNSIANNDTIGV 135

Query: 448 --SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
                LE            LAA    +   +  +        +   +  ++MS S F   
Sbjct: 136 INQSLLESAQKAHIFGAP-LAAKFTDSTADVVALDASLTTVRIVTAVMIVLMSASQFYTQ 194

Query: 506 KMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +             P  + Q M++   PV+F     +FP G+++YW  +NV ++ QQ  +
Sbjct: 195 RQLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254

Query: 557 MKMHGAE 563
           +  +   
Sbjct: 255 IHNNPTP 261


>gi|294668108|ref|ZP_06733215.1| membrane protein insertase, YidC/Oxa1 family [Neisseria elongata
           subsp. glycolytica ATCC 29315]
 gi|291309816|gb|EFE51059.1| membrane protein insertase, YidC/Oxa1 family [Neisseria elongata
           subsp. glycolytica ATCC 29315]
          Length = 150

 Score =  153 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 19/142 (13%)

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           Y++  INPL GC P+LLQIP+F  +Y  I  S+E+R AP+ GWI DL+  DP        
Sbjct: 11  YRSEKINPLGGCLPMLLQIPIFIGLYWAIFSSVELRQAPWLGWITDLSRHDPWF------ 64

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
                        I P++M+ +M+ Q  ++PPP D  QA ++  MP VF F    FPAGL
Sbjct: 65  -------------ILPVLMTATMWFQTTLNPPPTDPMQAKMMKIMPFVFSFMFFLFPAGL 111

Query: 539 IIYWSWSNVISIVQQAVIMKMH 560
           ++Y+  +N+++I QQ  + +  
Sbjct: 112 VLYYVVNNLLTIAQQWYVNRST 133


>gi|297158787|gb|ADI08499.1| putative inner membrane protein translocase component YidC
           [Streptomyces bingchenggensis BCW-1]
          Length = 387

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 111/250 (44%), Gaps = 30/250 (12%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  +    F  + +  +    +G++I+   V +++   PL  KQ  +T NM+ +QPK+  
Sbjct: 14  WIIVQFHAFYSLIFDRDSGWAWGLSIVSLVVLIRICLIPLFVKQIKATRNMQALQPKMKA 73

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           ++E++ +S  Q   + M++LYK    NPL+ C PIL Q P F ++Y+V++     R   F
Sbjct: 74  IQERY-KSDRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFISLYQVLNHIANNRTVGF 132

Query: 459 WGWIKDLAAADPTNIFTLFG----------------ILPFYLPGFMHVGIWPIIMSLSMF 502
                D +  D      +FG                +        +   +  ++MS S F
Sbjct: 133 I----DQSLLDSARSAHIFGAPLSVKFMSSASKVESLGASLTDVRVVTIVMIVLMSASQF 188

Query: 503 IQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
              +             P  + Q M++   PV+F     +FP G+++YW  +NV ++ QQ
Sbjct: 189 FTQRQLMTKNVDLTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQ 248

Query: 554 AVIMKMHGAE 563
             +++ +   
Sbjct: 249 MFVIRRNPTP 258


>gi|225434998|ref|XP_002284077.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 455

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 28/272 (10%)

Query: 337 GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           GWF FI++ M +++          ++   +G AI+L TV VK+  +PL KKQ  ST  M+
Sbjct: 101 GWFGFISEGMEVVLKVLEDGLTAVHVPYAYGFAIILLTVIVKIATYPLTKKQVESTLAMQ 160

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449
           N+QPKI  ++E++K +  + +Q    +LYK   +NPLAGC+P L  IPV+  +Y+ +S  
Sbjct: 161 NLQPKIKAIQERYKGN-QERIQLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 219

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-----------IWPIIMS 498
           + E      + WI  L              + + +P                 + P+++ 
Sbjct: 220 ANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLIPFVDGHPPLGWQDTAAYLVLPVLLV 279

Query: 499 LSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
           +S ++ M++  PP   D  Q     +  ++P++  +   S P+GL IYW  +NV+S  QQ
Sbjct: 280 ISQYVSMELMKPPQTDDPSQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 339

Query: 554 AVIMKMHGAEI----GLIDRLRSTFSKNYNSQ 581
             + K+ GA+          + +  +K   SQ
Sbjct: 340 VWLRKLGGAKPVVNEDASGIITAGRAKRSASQ 371


>gi|227536313|ref|ZP_03966362.1| inner membrane protein translocase component YidC [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227243828|gb|EEI93843.1| inner membrane protein translocase component YidC [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 389

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 72/363 (19%), Positives = 152/363 (41%), Gaps = 16/363 (4%)

Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281
           ++    +     +            +  +W+     Y++S+       +        +  
Sbjct: 16  SIYYKTAENNVDHLKESGDDDDQLDKRLTWIAFKQHYFSSILTSKTGFASADLDVKTAAE 75

Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341
               +   +  ++     K    +   F G  ++  +             + + WG   +
Sbjct: 76  ADIVKLYSAKAKLDFSNQKDNQYSFNFFFGPNKYNILKAQNDGSNSI---INMGWGPMRW 132

Query: 342 IAKPMF-MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           I + +   + ++      ++GI I++ T+ +K + FPL  K Y S A M+ ++P++DE++
Sbjct: 133 INQWITVPVFNFLDGFHMSYGIVILILTILLKGVLFPLTYKSYQSMAKMRVLKPQLDEIK 192

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
            K  +    +LQ+  ++LYK   +NPL GC P++LQ+P   A +       E+R    + 
Sbjct: 193 AKVGEDNAVLLQQEQMKLYKQAGVNPLGGCLPLVLQMPFTIAFFYFFPNLFELRGES-FL 251

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-- 518
           W+KDL+  D    F     +        HV +  ++M+L+  +    +   +     M  
Sbjct: 252 WVKDLSTYDSPITFPAIFGI-------DHVSLMCVLMTLTTLLTTWYNNATSGATGQMKY 304

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           I  +MP++F F L+SFPAGL  Y+    V + + Q +I +    +  ++ ++     K  
Sbjct: 305 IGYFMPLIFFFVLNSFPAGLNYYYFLGAVFTFLTQLLI-RSFVDDDKILAKIEEN-KKRP 362

Query: 579 NSQ 581
            S+
Sbjct: 363 ESE 365


>gi|302836307|ref|XP_002949714.1| inner membrane ALBINO3-like protein 2, chloroplast precursor
           [Volvox carteri f. nagariensis]
 gi|300265073|gb|EFJ49266.1| inner membrane ALBINO3-like protein 2, chloroplast precursor
           [Volvox carteri f. nagariensis]
          Length = 413

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 16/231 (6%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++  ++G AI+  TV VKL  FPL +KQ  ST +++ +QP++ EL+ K    P  +    
Sbjct: 100 HVPYSYGFAIITLTVLVKLATFPLTQKQVESTLSLQALQPRVKELQAKHADDPETLQL-E 158

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLAAADPTN- 472
             ++YK   +NPLAGC P L  IPVF  +Y  +S +         + WI  L+       
Sbjct: 159 TARMYKEAGVNPLAGCLPTLATIPVFIGLYNALSNAAKAGLLTEGFFWIPSLSGPTTIGG 218

Query: 473 -IFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAM---ILN 521
            +  LF    G  P          + P+++  S +   K+   +    D  Q     IL 
Sbjct: 219 GLEWLFPFQDGAPPVGWANAAAYLVMPVLLVASQYASQKIISTTQNSNDPAQQQSQAILK 278

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           ++P++  +   + P+GL +YW  +N++S  QQ  +      ++ + + +++
Sbjct: 279 FLPLMIGWFSLNVPSGLTLYWFVNNLLSTAQQLYL--KATVKVNVPESIKA 327


>gi|329938642|ref|ZP_08288038.1| Inner membrane protein translocase component YidC, long form
           [Streptomyces griseoaurantiacus M045]
 gi|329302133|gb|EGG46025.1| Inner membrane protein translocase component YidC, long form
           [Streptomyces griseoaurantiacus M045]
          Length = 443

 Score =  152 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 28/249 (11%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  +         +  +    +G++I+   + +++   PL  KQ  +T  M+ +QP++ +
Sbjct: 17  WVIVQFHTVYGAIFGADTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKK 76

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           ++E++K    Q   + M++LYK    NPL+ C PIL Q P FFA+Y V++    +     
Sbjct: 77  IQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNG---IATGKT 132

Query: 459 WGWIKD--LAAADPTNIFTLFGILPFYLPG-------------FMHVGIWPIIMSLSMFI 503
            G I D  LA+A   +IF       F                  +   +  ++MS S F 
Sbjct: 133 IGVINDDLLASARKAHIFGAPLAAKFMDSSDKVEALGATLTDVRVVTAVMIVLMSFSQFY 192

Query: 504 QMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
             +             P  + Q M++   PV+F     +FP G+++YW  +NV ++ QQ 
Sbjct: 193 TQRQLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQM 252

Query: 555 VIMKMHGAE 563
            +++ +   
Sbjct: 253 YVIRNNPTP 261


>gi|269797065|ref|YP_003316520.1| preprotein translocase subunit YidC [Sanguibacter keddieii DSM
           10542]
 gi|269099250|gb|ACZ23686.1| preprotein translocase subunit YidC [Sanguibacter keddieii DSM
           10542]
          Length = 365

 Score =  152 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/268 (23%), Positives = 124/268 (46%), Gaps = 25/268 (9%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W  F+   +F+ +         + ++I+   + ++ +  PL  KQ  ++  M+ +QP++ 
Sbjct: 14  WIMFLCHKLFVFIGLPDGAGVAWILSIVGLVIVIRTIMIPLFFKQIRASRGMQMVQPELQ 73

Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS--L 451
            +++K+K        + + +  + LYK H  NP A C P+LLQ PVFFA+++V++    +
Sbjct: 74  AIQKKYKNKKDPASREAMSRETMALYKKHGTNPFASCLPVLLQAPVFFALFRVLNSLRGI 133

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGIL--------PFYLPGFMHVGIWPIIMSLSMFI 503
                   G I D A A      +LFG          P  L   +  G+  + M+ + F+
Sbjct: 134 ADGTKSGIGPI-DQAVAQAAETSSLFGAPLSSTFLHEPTDLNTKIVAGVLIVSMAATQFL 192

Query: 504 QMK----MSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
             +     + P      P  + Q ++L  +PV+   +  +FP G++IYW+ +N+ S+ QQ
Sbjct: 193 TQRQLTMKNMPKAALEGPMMQTQKIMLYMLPVIMAVSGVNFPVGVLIYWTTTNLWSMGQQ 252

Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
              ++   A     +RL +       ++
Sbjct: 253 FYTIRKMPAPGSEAERLLNERKARKAAR 280


>gi|226530665|ref|NP_001150593.1| inner membrane protein ALBINO3 [Zea mays]
 gi|195640414|gb|ACG39675.1| inner membrane protein ALBINO3 [Zea mays]
          Length = 449

 Score =  152 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 77/275 (28%), Positives = 136/275 (49%), Gaps = 28/275 (10%)

Query: 334 IDWGWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
            + GWF FI++ + +++          ++  ++G AI+L T+ VK    PL KKQ  ST 
Sbjct: 98  KNSGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVESTL 157

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
            M+N+QP+I  +++++  +  + +Q    +LYK   +NPLAGC+P L  IPV+  +Y+ +
Sbjct: 158 AMQNLQPQIKAIQQRYAGN-QERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQAL 216

Query: 448 SI-SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPI 495
           S  + E      + WI  L            + I  LF    G  P      +   + P+
Sbjct: 217 SNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGITWLFPFVDGHPPLGWHDTICYLVLPV 276

Query: 496 IMSLSMFIQMKMSPPPA--DKGQAMIL---NWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           ++  S ++ M++  PP   D  Q   +    ++P +  +   S P+GL IYW  +NV+S 
Sbjct: 277 LLVASQYVSMEIMKPPQSDDPSQKNTMLILKFLPFMIGWFSLSVPSGLSIYWFTNNVLST 336

Query: 551 VQQAVIMKMHGAEIGLID----RLRSTFSKNYNSQ 581
            QQ  + KM GA+  + +     + +  +K  N+Q
Sbjct: 337 AQQVWLRKMGGAKPVVTEGGSGIITAGRAKRSNAQ 371


>gi|29830855|ref|NP_825489.1| putative inner membrane protein translocase component YidC
           [Streptomyces avermitilis MA-4680]
 gi|34098400|sp|P59811|OXAA_STRAW RecName: Full=Membrane protein oxaA
 gi|29607968|dbj|BAC72024.1| putative preprotein translocase YidC subunit [Streptomyces
           avermitilis MA-4680]
          Length = 428

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 26/229 (11%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
             +G++I+   + +++   PL  KQ  +T  M+ +QP++ +++E++K    Q   + M++
Sbjct: 36  WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDK-QRQSEEMMK 94

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEM---------RHAPFWGWIK 463
           LYK    NPL+ C PIL Q P FFA+Y V++      ++ +         R A  +G   
Sbjct: 95  LYKESGTNPLSSCLPILAQSPFFFALYHVLNGIATGKTIGVIDDQLLASARKAHIFG--A 152

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PADK 514
            LAA    +   +  +    +   +   I  ++MS S F   +             P  +
Sbjct: 153 PLAAKFTDSADKVTQLGATLMDVRVVTAIMIVLMSASQFYTQRQLMTKNVDTTVKTPFMQ 212

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            Q M++   PV+F     +FP G+++YW  +NV ++ QQ  +++ +   
Sbjct: 213 QQKMLMYVFPVMFAIFGINFPVGVLVYWLTTNVWTMGQQMYVIRNNPTP 261


>gi|239980791|ref|ZP_04703315.1| putative inner membrane protein translocase component YidC
           [Streptomyces albus J1074]
          Length = 414

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 24/228 (10%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
             +G++I+   + +++   PL  KQ  +T  M+ +QP++ +++E++K    Q   + M++
Sbjct: 19  WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDK-QRQSEEMMK 77

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI-------------SLEMRHAPFWGWIKD 464
           LYK    NPLA C PILLQ P FFA+Y V++               L             
Sbjct: 78  LYKDAGTNPLASCLPILLQSPFFFALYHVLNSIASNKTIGFIDEALLASAQKAHIVGAP- 136

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PADKG 515
           LAA    N   +  +        +   +  ++MS S F   +             P  + 
Sbjct: 137 LAAKFTDNADKIEALGSSTTNVHIVTAVMIVLMSASQFFTQRQLMTKNVDTTVKTPFMQQ 196

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           Q M++   P++F     +FP G+++YW  +N+ ++ QQ  +++ +   
Sbjct: 197 QKMLMYVFPIMFAVFGINFPVGVLVYWLTTNMWTMGQQMYVIRQNPTP 244


>gi|194702082|gb|ACF85125.1| unknown [Zea mays]
          Length = 455

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 77/275 (28%), Positives = 136/275 (49%), Gaps = 28/275 (10%)

Query: 334 IDWGWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
            + GWF FI++ + +++          ++  ++G AI+L T+ VK    PL KKQ  ST 
Sbjct: 102 KNSGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVESTL 161

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
            M+N+QP+I  +++++  +  + +Q    +LYK   +NPLAGC+P L  IPV+  +Y+ +
Sbjct: 162 AMQNLQPQIKAIQQRYAGN-QERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQAL 220

Query: 448 SI-SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPI 495
           S  + E      + WI  L            + I  LF    G  P      +   + P+
Sbjct: 221 SNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGITWLFPFVDGHPPLGWHDTICYLVLPV 280

Query: 496 IMSLSMFIQMKMSPPPA--DKGQAMIL---NWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           ++  S ++ M++  PP   D  Q   +    ++P +  +   S P+GL IYW  +NV+S 
Sbjct: 281 LLVASQYVSMEIMKPPQSDDPSQKNTMLILKFLPFMIGWFSLSVPSGLSIYWFTNNVLST 340

Query: 551 VQQAVIMKMHGAEIGLID----RLRSTFSKNYNSQ 581
            QQ  + KM GA+  + +     + +  +K  N+Q
Sbjct: 341 AQQVWLRKMGGAKPVVTEGGSGIITAGRAKRSNAQ 375


>gi|125569047|gb|EAZ10562.1| hypothetical protein OsJ_00395 [Oryza sativa Japonica Group]
          Length = 952

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 22/248 (8%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++  ++G AI+L TV VK    PL K+Q  ST  M+N+QP+I  +++++  +  + +Q  
Sbjct: 599 HVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPQIKAIQQRYAGN-QERIQLE 657

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNI 473
             +LYK   +NPLAGC+P L  IPV+  +Y+ +S  + E      + WI  L        
Sbjct: 658 TARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAA 717

Query: 474 FTLFGILPFYLPGF-----------MHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518
                 + + LP             +   + P+++  S F+ M++  PP   D  Q    
Sbjct: 718 RQSGAGISWLLPFVDGHPPLGWHDTICYLVLPVLLVASQFVSMEIMKPPQTDDPSQKNTL 777

Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI----DRLRST 573
            +L ++P +  +   S P+GL IYW  +N++S  QQ  + K+ GA+  +       + + 
Sbjct: 778 LVLKFLPFMIGWFSLSVPSGLSIYWFTNNILSTAQQVWLRKLGGAKPVVNQGGSGIITAG 837

Query: 574 FSKNYNSQ 581
            +K  ++Q
Sbjct: 838 RAKRTSAQ 845


>gi|318058974|ref|ZP_07977697.1| putative inner membrane protein translocase component YidC
           [Streptomyces sp. SA3_actG]
 gi|318077328|ref|ZP_07984660.1| putative inner membrane protein translocase component YidC
           [Streptomyces sp. SA3_actF]
          Length = 447

 Score =  151 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 34/258 (13%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
             WF FI  P+  ++  F+ L            +G++I+   + +++   PL  KQ  +T
Sbjct: 5   ASWFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKAT 64

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
             M+ +QP++  ++E++K    Q   + M++LYK    NPL+ C PIL+Q P FFA+Y V
Sbjct: 65  RAMQTLQPEMKRIQERYKSDK-QRQSEEMMKLYKESGTNPLSSCLPILVQSPFFFALYHV 123

Query: 447 ISISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFY----------LPGFMHVGIWP 494
           +     +      G I D  L +A   +IF       F               +      
Sbjct: 124 LDG---IASNKKIGVINDKLLDSAQQAHIFGAPLAAKFTSGADSLGADLTTVRIVTACMI 180

Query: 495 IIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
           ++MS S F   +             P  + Q M++   PV+F     +FP G+++YW  +
Sbjct: 181 VMMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLLYWLTT 240

Query: 546 NVISIVQQAVIMKMHGAE 563
           NV ++ QQ  +++ +   
Sbjct: 241 NVWTMGQQMFVIRQNPTP 258


>gi|302520509|ref|ZP_07272851.1| membrane protein oxaA [Streptomyces sp. SPB78]
 gi|302429404|gb|EFL01220.1| membrane protein oxaA [Streptomyces sp. SPB78]
          Length = 447

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 34/258 (13%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
             WF FI  P+  ++  F+ L            +G++I+   + +++   PL  KQ  +T
Sbjct: 5   ASWFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKAT 64

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
             M+ +QP++  ++E++K    Q   + M++LYK    NPL+ C PIL+Q P FFA+Y V
Sbjct: 65  RAMQTLQPEMKRIQERYKSDK-QRQSEEMMKLYKESGTNPLSSCLPILVQSPFFFALYHV 123

Query: 447 ISISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFY----------LPGFMHVGIWP 494
           +     +      G I D  L +A   +IF       F               +      
Sbjct: 124 LDG---IASNKKIGVINDKLLDSAQQAHIFGAPLAAKFTSGADSLGADLTTVRIVTACMI 180

Query: 495 IIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
           ++MS S F   +             P  + Q M++   PV+F     +FP G+++YW  +
Sbjct: 181 VMMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLLYWLTT 240

Query: 546 NVISIVQQAVIMKMHGAE 563
           NV ++ QQ  +++ +   
Sbjct: 241 NVWTMGQQMFVIRQNPTP 258


>gi|328883706|emb|CCA56945.1| Inner membrane protein translocase component YidC, long form
           [Streptomyces venezuelae ATCC 10712]
          Length = 441

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 26/248 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  +         +  +    +G++I+   V +++   PL  KQ  ST NM+ +QPK+  
Sbjct: 17  WVIVQFHKVYGAIFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQALQPKMKA 76

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEM 453
           ++E++K    Q   + M++LYK    NPL+ C PIL Q P FFA+Y V+S      ++ +
Sbjct: 77  IQERYKSDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSSIASGKTIGV 135

Query: 454 ---------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
                    R A  +G    LA+    +   +  +        +   I  ++MS S F  
Sbjct: 136 IDDSLLASARQAHIFG--APLASKFTDSAAEVAALDASLTSVRIVTAIMIVLMSASQFFT 193

Query: 505 MKMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
            +             P  + Q M++   PV+F     +FP G+++YW  +NV ++ QQ  
Sbjct: 194 QRQLMMKNVDLSVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMY 253

Query: 556 IMKMHGAE 563
           ++  +   
Sbjct: 254 VINQNPTP 261


>gi|269958144|ref|YP_003327933.1| 60 kDa inner membrane insertion protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269306825|gb|ACZ32375.1| 60 kDa inner membrane insertion protein [Xylanimonas
           cellulosilytica DSM 15894]
          Length = 314

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 68/268 (25%), Positives = 127/268 (47%), Gaps = 25/268 (9%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W  + A  +F  + +       + +AI+  T+ ++    PL  KQ  ++  M+ IQP++ 
Sbjct: 17  WVMYGAHWVFARLGFGDGPGFAWVLAIVALTLIMRAAMIPLFVKQIKASRGMQIIQPELQ 76

Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
            +++K+K        + + +  ++LYK H  NP A C PILLQ P+FFA+++V+S   ++
Sbjct: 77  AVQKKYKGKSDPASREAMTRETMELYKKHGTNPFASCLPILLQSPIFFALFRVLSNLQQI 136

Query: 454 RHA--PFWGWIKDLAAADPTNIFTLFG-------ILPFYLPGFMHVGIWPIIMSLSMFIQ 504
            +      G I D A A      +LFG       +        + V +  I+MS + F+ 
Sbjct: 137 ANGEIGPIGPI-DQAVASDFEASSLFGAKLSEVFLQTDDTAARIVVIVLIILMSATTFLT 195

Query: 505 MKM----SPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
            +     + P      P    Q M+L  +P++F  +  +FP G++IYW+ +N+ S+ QQ 
Sbjct: 196 QRQLTMKNMPKAALEGPMASTQKMMLYVLPLIFAVSGVNFPVGVLIYWTVTNIWSMGQQF 255

Query: 555 VIMKMHGAE-IGLIDRLRSTFSKNYNSQ 581
             +K   A        L+   ++   ++
Sbjct: 256 YTIKRMPAPGSEAERTLKERQARKAAAK 283


>gi|302559670|ref|ZP_07312012.1| membrane protein OxaA [Streptomyces griseoflavus Tu4000]
 gi|302477288|gb|EFL40381.1| membrane protein OxaA [Streptomyces griseoflavus Tu4000]
          Length = 424

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 24/247 (9%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  +         +  +    +G++I+   + +++   PL  KQ  +T  M+ +QP++ +
Sbjct: 17  WVIVQFHSVYGAVFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKK 76

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--------- 449
           ++E++K    Q   + M++LYK    NPL+ C PIL Q P FFA+Y V++          
Sbjct: 77  IQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNSIASNDTIGV 135

Query: 450 ----SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
                LE            LAA    +   +  +        +   I  ++MSLS F   
Sbjct: 136 INTRLLESAQKAHIFGAP-LAAKFTDSSAKVEALNSSLTDVRVVTAIMIVLMSLSQFYTQ 194

Query: 506 KMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +             P  + Q M++   PV+F     +FP G+++YW  +NV ++ QQ  +
Sbjct: 195 RQLMTKNVDTTVKTPFMQQQKMLMYVFPVIFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254

Query: 557 MKMHGAE 563
           +  +   
Sbjct: 255 IHNNPTP 261


>gi|255076059|ref|XP_002501704.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299]
 gi|226516968|gb|ACO62962.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299]
          Length = 480

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 68/236 (28%), Positives = 105/236 (44%), Gaps = 21/236 (8%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            ++G AI+  TV VK++ FPL KKQ   +  M+ IQP++ EL+  +    P+ LQ    +
Sbjct: 140 YSYGYAILALTVLVKVVTFPLTKKQVEGSLQMQAIQPRVKELQAMYAN-DPERLQMETAR 198

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS-LEMRHAPFWGWIKDLAAA-------D 469
           LYK  N NPLAGC P    +PVF  +Y+ +S + +E      + WI  L          D
Sbjct: 199 LYKEANFNPLAGCLPTFATLPVFIGLYRALSNAAVEGELTDGFYWIPSLGGPTSIEARND 258

Query: 470 PTNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPA---DKGQAM--- 518
                 LF    G  P      +   + P+++  S  I  K M+P      D  Q     
Sbjct: 259 GNGFAWLFPFVDGAPPLGWHDTIAYLVLPVLLVASQLISQKVMTPDQPKSDDPAQQQSQA 318

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574
           IL ++P +  F   + PAGL +YW  +N+ S  Q   + +       +   +    
Sbjct: 319 ILKFLPFMIGFFSLNVPAGLTLYWFANNIFSTAQTVYL-RKTTKAPEMPAAVAGGM 373


>gi|302552691|ref|ZP_07305033.1| membrane protein [Streptomyces viridochromogenes DSM 40736]
 gi|302470309|gb|EFL33402.1| membrane protein [Streptomyces viridochromogenes DSM 40736]
          Length = 428

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 55/246 (22%), Positives = 110/246 (44%), Gaps = 22/246 (8%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  +         +  +    +G++I+   + +++   PL  KQ  ST  M+ +QP++ +
Sbjct: 17  WVIVQFHSVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKSTRAMQTLQPEMKK 76

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEM 453
           ++E++K    Q   + M++LYK    NPL+ C PIL Q P FFA+Y V++      ++ +
Sbjct: 77  IQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNGIATGDTIGV 135

Query: 454 RHAPFWGWIK-------DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
            +       +        LAA    +   +  +        +   I  ++MS S F   +
Sbjct: 136 INQSLLQSAQKAHIVGAPLAAKFTDSSSKVEALGASLTDVRVVTAIMIVLMSASQFFTQR 195

Query: 507 MSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
                        P  + Q M++   PV+F     +FP G+++YW  +NV ++ QQ  ++
Sbjct: 196 QLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMYVI 255

Query: 558 KMHGAE 563
           + +   
Sbjct: 256 RNNPTP 261


>gi|291452650|ref|ZP_06592040.1| membrane protein oxaA [Streptomyces albus J1074]
 gi|291355599|gb|EFE82501.1| membrane protein oxaA [Streptomyces albus J1074]
          Length = 431

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 33/259 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
              F FI  P+  ++  F+ L            +G++I+   + +++   PL  KQ  +T
Sbjct: 5   ASLFSFITTPVSWVIVQFHKLYGALFGDDTGWAWGLSIVSLVILIRICLIPLFVKQIKAT 64

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
             M+ +QP++ +++E++K    Q   + M++LYK    NPLA C PILLQ P FFA+Y V
Sbjct: 65  RAMQTLQPEMKKIQERYKNDK-QRQSEEMMKLYKDAGTNPLASCLPILLQSPFFFALYHV 123

Query: 447 ISI-------------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           ++               L             LAA    N   +  +        +   + 
Sbjct: 124 LNSIASNKTIGFIDEALLASAQKAHIVGAP-LAAKFTDNADKIEALGSSTTNVHIVTAVM 182

Query: 494 PIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
            ++MS S F   +             P  + Q M++   P++F     +FP G+++YW  
Sbjct: 183 IVLMSASQFFTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLVYWLT 242

Query: 545 SNVISIVQQAVIMKMHGAE 563
           +N+ ++ QQ  +++ +   
Sbjct: 243 TNMWTMGQQMYVIRQNPTP 261


>gi|239942675|ref|ZP_04694612.1| putative inner membrane protein translocase component YidC
           [Streptomyces roseosporus NRRL 15998]
 gi|239989134|ref|ZP_04709798.1| putative inner membrane protein translocase component YidC
           [Streptomyces roseosporus NRRL 11379]
 gi|291446136|ref|ZP_06585526.1| membrane protein oxaA [Streptomyces roseosporus NRRL 15998]
 gi|291349083|gb|EFE75987.1| membrane protein oxaA [Streptomyces roseosporus NRRL 15998]
          Length = 421

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 28/230 (12%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
             +G++I+   V +++   PL  KQ  ST NM+ +QPK+  ++E++K    Q   + M++
Sbjct: 36  WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQVLQPKMKAIQERYKNDK-QRQSEEMMK 94

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM---------------RHAPFWGWI 462
           LYK    NPL+ C PIL Q P FFA+Y V+  S+                 R A  +G  
Sbjct: 95  LYKETGTNPLSSCLPILAQSPFFFALYHVL-SSIASGKKIGAINQDLLDSARQAHIFG-- 151

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PAD 513
             LAA    ++  +  +        +   I  ++MS S F   +             P  
Sbjct: 152 APLAAKFTDSVEKVTSLDASLTDVRIVTAIMIVLMSASQFFTQRQLMTKNVDLTVKTPYM 211

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           + Q M++   PV+F     +FP G+++YW  +NV ++ QQ  ++  +   
Sbjct: 212 QQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMYVINQNPTP 261


>gi|294630334|ref|ZP_06708894.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292833667|gb|EFF92016.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 432

 Score =  150 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 28/264 (10%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
           D     F  +     +  +         +  +    +G++I+   + +++   PL  KQ 
Sbjct: 2   DTIASLFSFITWPVSWVIVQFHKVYGAIFGADTGWAWGLSIVSLVILIRICLIPLFVKQI 61

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            +T  M+ +QP++ +++E++K    Q   + M++LYK    NPL+ C PIL Q P FFA+
Sbjct: 62  KATRAMQTLQPEMKKIQERYKNDK-QRQSEEMMKLYKEAGTNPLSSCLPILAQSPFFFAL 120

Query: 444 YKVISISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFYLPG-------------FM 488
           Y V++    +      G+I D  LA+A   +IF       F                  +
Sbjct: 121 YHVLNG---IASGNKIGYINDAQLASARQAHIFGAPLAAKFLDGADTVAKLGASLTDVRV 177

Query: 489 HVGIWPIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLI 539
              +  ++MS S F   +             P  + Q M++   P++F F    FP G++
Sbjct: 178 VTALMIVLMSASQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPIMFAFFGIRFPVGVL 237

Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563
           +YW  +NV ++ QQ  ++  +   
Sbjct: 238 VYWLTTNVWTMGQQMYVIHNNPTP 261


>gi|124010502|ref|ZP_01695137.1| inner membrane protein OxaA [Microscilla marina ATCC 23134]
 gi|123982339|gb|EAY23887.1| inner membrane protein OxaA [Microscilla marina ATCC 23134]
          Length = 548

 Score =  150 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 98/503 (19%), Positives = 189/503 (37%), Gaps = 34/503 (6%)

Query: 94  LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153
           L+ Y      +   + L+  +N+K     E       N  +L  S      I  K    +
Sbjct: 3   LKNYKT---YDKKPLYLMDGTNSKIDLTVETSDNKQINLADLYFSTNAAAKIEVKNKAQS 59

Query: 154 TPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212
              KL       I    ++  D     + +      N++ +        +   K      
Sbjct: 60  VSFKLELAPNQYIEQIYSLKADGFELGYDLKFVGLENTLRRQSDVAFHWVNEMKRLEFDL 119

Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
               Q+  I     K   E+      +       E+  W   + K++ +  I   +    
Sbjct: 120 EQSRQKAKINYYLSKGDFEELSGLTAEYQQKRIKETLHWATFNQKFFTTGLIAKNKNFNA 179

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITT---TNFLFAGAKEFPTIHHYEKDLAIPR 329
           + F            +       ++    I         + G  ++  +   E +     
Sbjct: 180 AVFATEVKDPKSKTVEKHGEIDLLVGSNDIIAGKGQFSFYFGPNQYYILKKVEAESFSDN 239

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
             +       +F    +  L ++    V N+G+ I+L ++ +K + FPL  + Y S A M
Sbjct: 240 VYLGYPV-VNWFAKYLVVPLFAFLEGFVSNYGVIIILLSLIIKSMLFPLTYRSYKSMAKM 298

Query: 390 K----NIQPKIDELREKFK------QSPPQVLQKAMIQLYKTHNINPL---AGCWPILLQ 436
           K     +QP++D  +EK +      +   Q       +LYK    +P     GC P+LLQ
Sbjct: 299 KVINKYLQPRMDAFKEKHRKENGGKEPDMQTTSMHQQELYKKIGQSPFAAVQGCLPMLLQ 358

Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           +P+ FA++     ++E+R  P + W  DL+  D  ++ T    LPF      H+ I+ ++
Sbjct: 359 MPILFAMFMFFPSAIELRQQP-FLWASDLSVYD--HVITFSFNLPFLGN---HISIFTLL 412

Query: 497 MSLSMF---IQMKMSPPPADKGQA----MILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
           MS+S     +    +   A    A    +++  MP++F F L+S+P+GL  Y+   N+I+
Sbjct: 413 MSISSIGITMTSNQNTATAGGPNAGMMKVMMYMMPIIFFFVLNSYPSGLSFYYLIQNLIT 472

Query: 550 IVQQAVIMKMHGAEIGLIDRLRS 572
           + QQ +I +    E  +  ++  
Sbjct: 473 LGQQHLIKRYFVDEEKIEAKISK 495


>gi|326510231|dbj|BAJ87332.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326514202|dbj|BAJ92251.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520860|dbj|BAJ92793.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 449

 Score =  150 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 28/272 (10%)

Query: 337 GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           GWF FI+  M +++          ++   +G AI+L T+ VK    PL K+Q  ST  M+
Sbjct: 98  GWFGFISDAMEVVLKILKDGLSAVHVPYAYGFAIILLTIVVKAATLPLTKQQVESTMAMQ 157

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449
           N+QP++  ++ ++  +  + +Q    +LYK   +NPLAGC P L  IPV+  +Y+ +S  
Sbjct: 158 NLQPQLKAIQARYAGN-QERIQLETARLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNV 216

Query: 450 SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPIIMS 498
           + E      + WI  L              I  LF    G  P      +   + P+++ 
Sbjct: 217 ANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPIGWHDTICYLVLPVLLV 276

Query: 499 LSMFIQMKMS--PPPADKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            S F+ M++   P   D  Q     IL ++P +  +   S P+GL IYW  +NV+S  QQ
Sbjct: 277 ASQFVSMEIMKPPQSTDPSQKNTQLILKFLPFMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 336

Query: 554 AVIMKMHGAEIGLID----RLRSTFSKNYNSQ 581
             + K+ GA+  + +     + +  +K   SQ
Sbjct: 337 IWLRKLGGAKPAVNEGASGIITAGRAKRSGSQ 368


>gi|269836199|ref|YP_003318427.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus
           DSM 20745]
 gi|269785462|gb|ACZ37605.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 332

 Score =  150 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 37/233 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +      + + + Y  +  G+ G+++++ T+ +K L  PL  K   ST+ M+ IQPK+ E
Sbjct: 4   WREFVGLIELGLGYIADYTGSAGLSVIIFTILIKTLLLPLTVKAVRSTSAMQEIQPKLKE 63

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L++K+     Q L +  ++LY+ H INP AGC P+LLQ+P+ F +Y+ I     +  A  
Sbjct: 64  LQKKY-GKDRQRLSQETMKLYQEHGINPAAGCLPMLLQLPILFGLYEAIRS---LSQAGT 119

Query: 459 ------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511
                 + W+  LA+ DP                     I P++  L   +Q KM+ P  
Sbjct: 120 GTWGEGFMWLPSLASTDPHY-------------------ILPVMAGLFQLVQTKMTRPAG 160

Query: 512 ----ADKGQAMI---LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
                D  Q M+   + +MP++ V     FP+GL++YW+ S + S++QQ  I 
Sbjct: 161 QGKITDPQQRMMNTMMTFMPLMVVAFGVKFPSGLVLYWTVSALYSVIQQWFIT 213


>gi|182437489|ref|YP_001825208.1| putative inner membrane protein translocase component YidC
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178466005|dbj|BAG20525.1| putative membrane protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 419

 Score =  150 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 28/230 (12%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
             +G++I+   V +++   PL  KQ  ST NM+ +QPK+  ++E++K    Q   + M++
Sbjct: 36  WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQVLQPKMKAIQERYKNDK-QRQSEEMMK 94

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM---------------RHAPFWGWI 462
           LYK    NPL+ C PIL Q P FFA+Y V+  S+                 R A  +G  
Sbjct: 95  LYKETGTNPLSSCLPILAQSPFFFALYHVL-SSIASGKKIGAINQDLLDSARQAHIFG-- 151

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PAD 513
             LAA    ++  +  +        +   I  ++MS S F   +             P  
Sbjct: 152 APLAAKFTDSVEKVTSLDASLTDVRIVTAIMIVLMSASQFFTQRQLMTKNVDLTVKTPYM 211

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           + Q M++   PV+F     +FP G+++YW  +NV ++ QQ  ++  +   
Sbjct: 212 QQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMYVINQNPTP 261


>gi|218187535|gb|EEC69962.1| hypothetical protein OsI_00422 [Oryza sativa Indica Group]
          Length = 459

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 22/248 (8%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++  ++G AI+L TV VK    PL K+Q  ST  M+N+QP+I  +++++  +  + +Q  
Sbjct: 132 HVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPQIKAIQQRYAGN-QERIQLE 190

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNI 473
             +LYK   +NPLAGC+P L  IPV+  +Y+ +S  + E      + WI  L        
Sbjct: 191 TARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAA 250

Query: 474 FTLFGILPFYLPGF-----------MHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518
                 + + LP             +   + P+++  S F+ M++  PP   D  Q    
Sbjct: 251 RQSGAGISWLLPFVDGHPPLGWHDTICYLVLPVLLVASQFVSMEIMKPPQTDDPSQKNTL 310

Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI----DRLRST 573
            +L ++P +  +   S P+GL IYW  +N++S  QQ  + K+ GA+  +       + + 
Sbjct: 311 LVLKFLPFMIGWFSLSVPSGLSIYWFTNNILSTAQQVWLRKLGGAKPVVNQGGSGIITAG 370

Query: 574 FSKNYNSQ 581
            +K  ++Q
Sbjct: 371 RAKRTSAQ 378


>gi|125546414|gb|EAY92553.1| hypothetical protein OsI_14293 [Oryza sativa Indica Group]
          Length = 533

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 68/241 (28%), Positives = 122/241 (50%), Gaps = 18/241 (7%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++   +G AI+L TV VK   FPL KKQ  S   M+++QP++  ++E++     + +Q  
Sbjct: 122 HVPYPYGFAIILLTVLVKAATFPLTKKQVESAIAMRSLQPQVKAIQERYAG-DQERIQLE 180

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTN- 472
             +LYK   ++PLAGC P L+ IPV+  +Y+ +S  + E      + WI  LA       
Sbjct: 181 TARLYKLSGVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAA 240

Query: 473 ------IFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQA--- 517
                 I  LF    G  P      +   + P+++ +S ++  ++  PP   D  Q    
Sbjct: 241 RQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQGAQ 300

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
            ++ ++P++  +   S P+GL +YW  +N++S  QQ  + K+ GA+  + + + S+  KN
Sbjct: 301 AVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYMISSLKKN 360

Query: 578 Y 578
            
Sbjct: 361 Q 361


>gi|239930179|ref|ZP_04687132.1| putative inner membrane protein translocase component YidC
           [Streptomyces ghanaensis ATCC 14672]
 gi|291438521|ref|ZP_06577911.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
 gi|291341416|gb|EFE68372.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
          Length = 421

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 24/247 (9%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  +         +  +    +G++I+   + +++   PL  KQ  +T  M+ +QP++ +
Sbjct: 17  WVIVQFHSVYGAVFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKK 76

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--------- 449
           ++E++K    Q   + M++LYK    NPL+ C PIL Q P FFA+Y V++          
Sbjct: 77  IQERYKN-DRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNSIASNDTIGV 135

Query: 450 ----SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
                LE            LAA    +   +  +        +   I  ++MSLS F   
Sbjct: 136 INERLLESAQKAHIFGAP-LAAKFTDSSEKVAALNSSLTDVRVVTAIMIVLMSLSQFYTQ 194

Query: 506 KMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +             P  + Q M++   P++F     +FP G+++YW  +NV ++ QQ  I
Sbjct: 195 RQLMTKNVDTTVKTPFMQQQKMLMYVFPIIFAVFGINFPVGVLVYWLTTNVWTMGQQMYI 254

Query: 557 MKMHGAE 563
           +  +   
Sbjct: 255 IHNNPTP 261


>gi|15226968|ref|NP_180446.1| ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane
           transporter [Arabidopsis thaliana]
 gi|38372238|sp|Q8LBP4|ALB3_ARATH RecName: Full=Inner membrane protein ALBINO3, chloroplastic; Flags:
           Precursor
 gi|2209332|gb|AAB61458.1| chloroplast membrane protein ALBINO3 [Arabidopsis thaliana]
 gi|3927828|gb|AAC79585.1| chloroplast membrane protein (ALBINO3) [Arabidopsis thaliana]
 gi|27311661|gb|AAO00796.1| chloroplast membrane protein (ALBINO3) [Arabidopsis thaliana]
 gi|30387561|gb|AAP31946.1| At2g28800 [Arabidopsis thaliana]
 gi|330253078|gb|AEC08172.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
          Length = 462

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 22/248 (8%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++   +G AI+L T+ VK   +PL K+Q  ST  M+N+QPKI  +++++  +  + +Q  
Sbjct: 135 HVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLE 193

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470
             +LYK   +NPLAGC P L  IPV+  +Y+ +S  + E      + WI  L        
Sbjct: 194 TSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIAA 253

Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518
               + I  LF    G  P      +   + P+++  S ++ M++  PP   D  Q    
Sbjct: 254 RQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTL 313

Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRST 573
            +  ++P++  +   S P+GL IYW  +NV+S  QQ  + K+ GA+  + +     + + 
Sbjct: 314 LVFKFLPLMIGYFALSVPSGLSIYWLTNNVLSTAQQVYLRKLGGAKPNMDENASKIISAG 373

Query: 574 FSKNYNSQ 581
            +K   +Q
Sbjct: 374 RAKRSIAQ 381


>gi|307105705|gb|EFN53953.1| hypothetical protein CHLNCDRAFT_25162 [Chlorella variabilis]
          Length = 423

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 16/215 (7%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            ++G AI+L TV VK+  +PL K+Q  ST +M+ +QP++ EL+ K+    P+ LQ    +
Sbjct: 122 YSYGFAIILLTVLVKVATYPLTKQQVESTLSMQAMQPRVKELQAKYAN-DPERLQVETAK 180

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAA-------D 469
           +Y+T  +NPLAGC P L  IPVF  +YK +S  + E      + WI  LA         D
Sbjct: 181 MYQTAGVNPLAGCLPSLATIPVFIGLYKALSNVASEGLLTDGFFWIPSLAGPTTVNGGLD 240

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAM---ILNWM 523
               +   G             + PI++ +S  I  K+  PP    D  Q     IL ++
Sbjct: 241 WLFKWQ-DGAPLLGYGQTAAYLVLPILLVVSQAISQKVISPPQQSNDPAQQQTQAILKFL 299

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           P++  +   + P+GL +YW  +N+I+  QQ  + +
Sbjct: 300 PLMIGWFSLNVPSGLTLYWFTNNLITTAQQLYLRR 334


>gi|295697833|ref|YP_003591071.1| membrane protein insertase, YidC/Oxa1 family [Bacillus tusciae DSM
           2912]
 gi|295413435|gb|ADG07927.1| membrane protein insertase, YidC/Oxa1 family [Bacillus tusciae DSM
           2912]
          Length = 246

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/224 (27%), Positives = 113/224 (50%), Gaps = 21/224 (9%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
              W+          +  F     ++GIAI++ T+ ++L+  PL  +Q   +  M+ +QP
Sbjct: 33  RSTWWGAFVGWFSDGIDLFARWTHDYGIAILVVTILIRLITLPLWLRQMKYSKVMQEMQP 92

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           +  +LR+K+  +  + L + M++L++   +NPL+GC P L+Q+P+ +A+Y+ I  S  M 
Sbjct: 93  QFQKLRQKYGDNKEK-LNEEMVKLFQQTGVNPLSGCLPTLIQLPILWALYQAIR-SNAML 150

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
            A  +  I  L   D                      I P++ +++ +IQ KM     DK
Sbjct: 151 QAHEFLGIWPLGQPDHYF-------------------ILPVLAAVTTYIQSKMMLTTNDK 191

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            Q MIL  MP++ +F   S P+ L +YW ++N+++I+Q     K
Sbjct: 192 QQQMILVMMPLMILFIAVSLPSALSLYWVYTNLLTIIQYYFFTK 235


>gi|330444486|ref|YP_004377472.1| 60 kDa inner membrane protein [Chlamydophila pecorum E58]
 gi|328807596|gb|AEB41769.1| 60 kDa inner membrane protein [Chlamydophila pecorum E58]
          Length = 714

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 87/375 (23%), Positives = 157/375 (41%), Gaps = 38/375 (10%)

Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
             V     L + K   ++   +        W+  S+ Y+  +  P           YL  
Sbjct: 331 YRVQSKGQLDKAKLPKMKTPLMFQRGAHPQWILNSNGYFGIILTPLTNIPTGFASLYLPG 390

Query: 281 GHARYQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326
                +                     +  LP ++ ++   ++AG    P++   +K   
Sbjct: 391 SVLPTRLTLLEPRNQAFPAAKYPGYETLMPLPKEAGSSKFLVYAGPLAEPSLKTLDKTFT 450

Query: 327 IPRFEMLIDWGWFY----------FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
               E                     A  +F++M +F  L G++G++I+L TVF+KLL +
Sbjct: 451 KENGENPQYLSCISLRGFLSFITAPFASLLFVIMKFFKALTGSWGLSIVLLTVFLKLLLY 510

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436
           PL      S   M+ + P I ++++K+ +  P+  Q  ++ LYK + +NP+ GC P+L+Q
Sbjct: 511 PLNAWSIRSMRRMQKLSPYIQQIQQKY-KKEPRRAQMEVMALYKANKVNPITGCLPLLIQ 569

Query: 437 IPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           +P   A++ ++  S  +R A  + GWI +L A D    +     + F    F    + PI
Sbjct: 570 LPFLIAMFDLLKSSFLLRGASLFPGWIDNLTAPDVLFSWQHP--IWFIGNEF---HVLPI 624

Query: 496 IMSLSMFIQMKMSPPPADKGQAMIL-------NWMPVVFVFALSSFPAGLIIYWSWSNVI 548
           I+ L MF+Q KM+                     M ++F     +FP+GL IYW  S ++
Sbjct: 625 ILGLVMFVQQKMTNYNKQGQMTEQQRQQQTMGTVMAILFTAMFYNFPSGLNIYWLSSMIL 684

Query: 549 SIVQQAVIMKMHGAE 563
            I+QQ V  K+  ++
Sbjct: 685 GIIQQWVTNKVLDSK 699


>gi|212640679|ref|YP_002317199.1| OxaA-like protein precursor [Anoxybacillus flavithermus WK1]
 gi|212562159|gb|ACJ35214.1| Stage III sporulation protein J, essential for sigma-G activity
           [Anoxybacillus flavithermus WK1]
          Length = 255

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 29/241 (12%)

Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382
            ++  P       +   Y +    +++         N+G+ I++ T+ ++L   PL  +Q
Sbjct: 21  SEVNQPITPESKGFWNEYIVYPLSWLITYMSELFGSNYGLGIIVVTILIRLAILPLMIQQ 80

Query: 383 YVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
             ++  M+ +QP++ +LREK+        Q LQ+  + L++ H +NPLAGC P+ +Q+P+
Sbjct: 81  TRNSKAMQALQPELQKLREKYSSKDAQTQQKLQQETMLLFQKHGVNPLAGCLPLFIQMPI 140

Query: 440 FFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
               Y  I  + E+ RH   + W  DL   DP                     I P++  
Sbjct: 141 LIGFYHAIMRTEEIARH--NFLWF-DLGEKDPFY-------------------ILPLVAG 178

Query: 499 LSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           ++ FIQ KM        +   AM+L  MP++ V    +FPA L +YW   N+  I Q   
Sbjct: 179 VTTFIQQKMMMAGTEQQNPQMAMMLWLMPIMVVVFAINFPAALSLYWVVGNLFMIAQTYF 238

Query: 556 I 556
           I
Sbjct: 239 I 239


>gi|297826255|ref|XP_002881010.1| hypothetical protein ARALYDRAFT_901831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326849|gb|EFH57269.1| hypothetical protein ARALYDRAFT_901831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 458

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 22/248 (8%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++   +G AI+L T+ VK   +PL K+Q  ST  M+N+QPKI  +++++  +  + +Q  
Sbjct: 131 HVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLE 189

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470
             +LYK   +NPLAGC P L  IPV+  +Y+ +S  + E      + WI  L        
Sbjct: 190 TSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAA 249

Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518
               + I  LF    G  P          + P+++  S ++ M++  PP   D  Q    
Sbjct: 250 RQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTL 309

Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRST 573
            +  ++P++  +   S P+GL IYW  +NV+S  QQ  + K+ GA+  + +     + + 
Sbjct: 310 LVFKFLPLMIGYFALSVPSGLSIYWFTNNVLSTAQQVYLRKLGGAKPNMDENASKIISAG 369

Query: 574 FSKNYNSQ 581
            +K   +Q
Sbjct: 370 RAKRSIAQ 377


>gi|297627570|ref|YP_003689333.1| hypothetical protein PFREUD_24190 [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
 gi|296923335|emb|CBL57936.1| Conserved membrane protein [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 355

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 66/257 (25%), Positives = 129/257 (50%), Gaps = 28/257 (10%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVST 386
                  Y+    + +L    ++   N      + +AI+L T F++LL  PL  KQ  S+
Sbjct: 12  SAIMQPLYWAVSGLIVLFHKLFSFFMNPDSGLTWTLAIVLLTCFIRLLMMPLYAKQLNSS 71

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
             M++IQPK++EL++K+  S  + L +  ++LY    +NP + C P+L+Q+P+F+A+++V
Sbjct: 72  RAMQSIQPKVEELQKKY-GSDRERLGQETMKLYNEEGVNPASSCLPLLIQLPIFWALFRV 130

Query: 447 ISISLEMRHAPFWGWIK-------DLAAADPTNIFTLFGILPF---YLPGFMHVGIWPII 496
           +S +   R+   + W++        L+ AD           P    +           I+
Sbjct: 131 LSSAASDRNVHGY-WLQRSPEITASLSHADLFGAKLSGTFWPLTGGFGATQGFALALAIL 189

Query: 497 MSLSMFIQM----KMSPPPADKG-----QAMILNWM-PVVFVFALSSFPAGLIIYWSWSN 546
           M+  MF+Q     K + PPA +      Q  ++ +M P++++F   + P G+++YW  +N
Sbjct: 190 MTGLMFVQQLHMLKRNMPPAAQTGPMAQQQKMMLYMFPLMYLFGGMAMPIGVLLYWLATN 249

Query: 547 VISIVQQAVIMKMHGAE 563
           + ++ QQ VI++ +   
Sbjct: 250 IWTMAQQYVIIRNYPTP 266


>gi|21592693|gb|AAM64642.1| chloroplast membrane protein ALBINO3 [Arabidopsis thaliana]
          Length = 462

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 70/248 (28%), Positives = 124/248 (50%), Gaps = 22/248 (8%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++   +G AI+L T+ VK   +PL K+Q  ST  M+N+QPKI  +++++  +  + +Q  
Sbjct: 135 HVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLE 193

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470
             +LYK  ++NPLAGC P L  IPV+  +Y+ +S  + E      + WI  L        
Sbjct: 194 TSRLYKQASVNPLAGCLPTLATIPVWIGLYQALSNLANEGLFTEGFFWIPSLGGPTSIAA 253

Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518
               + I  LF    G  P      +   + P+++  S ++ M++  PP   D  Q    
Sbjct: 254 RQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTL 313

Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRST 573
            +  ++P++  +   S P+GL IYW  +NV+S  QQ  + K+ GA+  + +     + + 
Sbjct: 314 LVFKFLPLMIGYFALSVPSGLSIYWLTNNVLSTAQQVYLRKLGGAKPNMDENASKIISAG 373

Query: 574 FSKNYNSQ 581
            +K   +Q
Sbjct: 374 RAKRSIAQ 381


>gi|38372239|sp|Q8LKI3|ALB32_CHLRE RecName: Full=Inner membrane ALBINO3-like protein 2, chloroplastic;
           Flags: Precursor
 gi|21361062|gb|AAM49792.1|AF514291_1 albino 3-like protein [Chlamydomonas reinhardtii]
          Length = 422

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 15/229 (6%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           +  ++G AI+  TV VK+  FPL +KQ  ST +++ +QP++ EL+ K+   P  +     
Sbjct: 97  IPYSYGFAIIALTVLVKVATFPLTQKQVESTLSLQALQPRVKELQAKYADDPENLQL-ET 155

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLAAADP---- 470
            +LYK   +NPLAGC+P L  IPVF  +Y  +S +  E      + WI  L         
Sbjct: 156 ARLYKEAGVNPLAGCFPTLATIPVFIGLYNALSNAAKEGLLTEGFFWIPSLGGPTTIGGG 215

Query: 471 --TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--SPPPADKGQAM---ILNWM 523
               +    G  P          + P+++  S +   K+  S    D  Q     IL ++
Sbjct: 216 LEWLVPFENGAPPVGWANAAAYLVMPVLLVASQYASQKIISSQNNQDPSQQQAQAILKFL 275

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           P++  +   + P+GL +YW  +N++S  QQ  +      ++ + + +++
Sbjct: 276 PLMIGWFSLNVPSGLTLYWFVNNLLSTGQQLYL--KATVKVNIPEAIKA 322


>gi|295837761|ref|ZP_06824694.1| membrane protein OxaA [Streptomyces sp. SPB74]
 gi|197698917|gb|EDY45850.1| membrane protein OxaA [Streptomyces sp. SPB74]
          Length = 434

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 34/258 (13%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
             WF FI  P+  ++  F+ L            +G++I+   + +++   PL  KQ  +T
Sbjct: 5   ASWFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKAT 64

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
             M+ +QP++  ++E++K    Q   + M++LYK    NPLA C PIL+Q P FFA+Y V
Sbjct: 65  RAMQTLQPEMKRIQERYKSDK-QRQSEEMMKLYKESGTNPLASCLPILVQSPFFFALYHV 123

Query: 447 ISISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFY----------LPGFMHVGIWP 494
           +     +      G I D  L +A   +IF       F               +      
Sbjct: 124 LDG---IASNKKIGVINDKLLDSAQQAHIFGAPLAAKFTSGADSLGADLTTVRIVTACMI 180

Query: 495 IIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
           ++MS S F   +             P  + Q M++   P++F     +FP G+++YW  +
Sbjct: 181 VMMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLLYWLTT 240

Query: 546 NVISIVQQAVIMKMHGAE 563
           NV ++ QQ  +++ +   
Sbjct: 241 NVWTMGQQMYVIRQNPTP 258


>gi|297746102|emb|CBI16158.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 28/272 (10%)

Query: 337 GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           GWF FI++ M +++          ++   +G AI+L TV VK+  +PL KKQ  ST  M+
Sbjct: 97  GWFGFISEGMEVVLKVLEDGLTAVHVPYAYGFAIILLTVIVKIATYPLTKKQVESTLAMQ 156

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449
           N+QPKI  ++E++K +  + +Q    +LYK   +NPLAGC+P L  IPV+  +Y+ +S  
Sbjct: 157 NLQPKIKAIQERYKGN-QERIQLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 215

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-----------IWPIIMS 498
           + E      + WI  L              + + +P                 + P+++ 
Sbjct: 216 ANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLIPFVDGHPPLGWQDTAAYLVLPVLLV 275

Query: 499 LSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
           +S ++ M++  PP   D  Q     +  ++P++  +   S P+GL IYW  +NV+S  QQ
Sbjct: 276 ISQYVSMELMKPPQTDDPSQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 335

Query: 554 AVIMKMHGAEI----GLIDRLRSTFSKNYNSQ 581
             + K+ GA+          + +  +K   SQ
Sbjct: 336 VWLRKLGGAKPVVNEDASGIITAGRAKRSASQ 367


>gi|326778144|ref|ZP_08237409.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf.
           griseus XylebKG-1]
 gi|326658477|gb|EGE43323.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf.
           griseus XylebKG-1]
          Length = 419

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 28/230 (12%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
             +G++I+   V +++   PL  KQ  ST NM+ +QPK+  ++E++K    Q   + M++
Sbjct: 36  WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQVLQPKMKAIQERYKNDK-QRQSEEMMK 94

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM---------------RHAPFWGWI 462
           LYK    NPL+ C PIL Q P FFA+Y V+  S+                 R A  +G  
Sbjct: 95  LYKETGTNPLSSCLPILAQSPFFFALYHVL-SSIASGKKIGAINQDLLDSARQAHIFG-- 151

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PAD 513
             LAA    ++  +  +        +   I  ++MS S F   +             P  
Sbjct: 152 APLAAKFTDSVEKVTSLDASLTDVRIVTAIMIVLMSASQFFTQRQLMTKNVDLTVKTPYM 211

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           + Q M++   PV+F     +FP G+++YW  +NV ++ QQ  ++  +   
Sbjct: 212 QQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMYVINQNPTP 261


>gi|111226214|ref|YP_717008.1| putative membrane protein oxaA [Frankia alni ACN14a]
 gi|111153746|emb|CAJ65504.1| putative Membrane protein oxaA [Frankia alni ACN14a]
          Length = 470

 Score =  148 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 31/235 (13%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
              +  +++L  + V++L FPL  KQ  S   M+ +QP+I E+REK+       +Q+ ++
Sbjct: 29  FFAWAFSVVLLVIAVRVLIFPLFVKQVKSQRTMQMMQPRIKEIREKY-GHDKPRMQQEIM 87

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF--WGWIK----------- 463
            L K H  NPL GC PILLQIP+F +++ V +    M   P     W             
Sbjct: 88  ALQKEHG-NPLLGCLPILLQIPLFISLFHVFTHLAPMNEGPNGALVWRPRVGLSADQVEQ 146

Query: 464 ---------DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---P 511
                     LA+   ++   +  +        +   +  ++M L+ F+  +       P
Sbjct: 147 IASAKVFGISLASEFGSDSDFVHFLGVNSTHVKILAVVLIVLMGLTTFMTQRQIMARTGP 206

Query: 512 ADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            D  QA++   +    P++       FP  +++YW  +N+ S+ QQ  ++K    
Sbjct: 207 VDPQQAIVQKVLLYGSPLMLAIFGFRFPIAVLLYWLTTNLWSMGQQFFVIKRMPP 261


>gi|254391432|ref|ZP_05006634.1| membrane protein oxaA [Streptomyces clavuligerus ATCC 27064]
 gi|197705121|gb|EDY50933.1| membrane protein oxaA [Streptomyces clavuligerus ATCC 27064]
          Length = 415

 Score =  148 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 113/263 (42%), Gaps = 26/263 (9%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
           D     F  +     +  +         +  +    +G++I+   V +++   PL  KQ 
Sbjct: 2   DTIASLFSFITTLVSWIIVQFHKLYGAMFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQI 61

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            S  NM+ +QPK+  ++E++K    Q   + M++LYK    NPL+ C PIL Q P FFA+
Sbjct: 62  KSMRNMQALQPKMKAIQERYKN-DRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFAL 120

Query: 444 YKVISI-----SLEM---------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489
           Y V+S      ++ +         R A  +G    LAA    +   +  +        + 
Sbjct: 121 YYVLSNIASGKTVGVINESLLESARQAHIFG--APLAAKFMDSEAKVASLDASLTTVRIV 178

Query: 490 VGIWPIIMSLSMFIQMKMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLII 540
             +  ++MS S F   +             P  + Q M++   PV+F     +FP G+++
Sbjct: 179 TAVMIVLMSASQFYTQRQLMQKNVDLSVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLV 238

Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563
           YW  +NV ++ QQ  ++  +   
Sbjct: 239 YWLTTNVWTMGQQMYVINQNPTP 261


>gi|312200977|ref|YP_004021038.1| membrane protein insertase, YidC/Oxa1 family [Frankia sp. EuI1c]
 gi|311232313|gb|ADP85168.1| membrane protein insertase, YidC/Oxa1 family [Frankia sp. EuI1c]
          Length = 434

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 32/235 (13%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
              +  ++ L  V V++L FPL  KQ  S   M+ +QP+I E+REK+     Q + + M+
Sbjct: 29  FFAWAFSVALLVVCVRILIFPLFVKQVKSQRTMQLMQPRIKEIREKY-GHDKQQMNQKMM 87

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---------------------ISLEMRH 455
           +L K H  NPL GC PI LQIP+F +++ V +                      ++E + 
Sbjct: 88  ELQKEHG-NPLLGCLPIFLQIPLFISLFHVFTHMAPVTKNGKLEWVDRVGLSGATIE-KI 145

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--- 512
           A    W   L+    ++   L  +    +   +   +  ++M+ + F   +         
Sbjct: 146 AKAKIWGISLSTNFNSSKALLNELHADSVHIKIVCVVLILLMAATTFFTQRQIMARTGGT 205

Query: 513 -DKGQ---AMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            D  Q     I+ +  P+        FP  ++IYW  +N+ S+ QQ  ++K    
Sbjct: 206 VDPQQAIVQKIMLYGSPITLAVFGFRFPVAVLIYWLVTNLWSMGQQFFVIKRMPP 260


>gi|148905860|gb|ABR16092.1| unknown [Picea sitchensis]
          Length = 471

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 22/250 (8%)

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
             ++   +G AI+  TV VK+  FPL KKQ  ST  M+N+QPKI  ++E++K    + +Q
Sbjct: 121 TVHVPYAYGFAIITLTVLVKIATFPLTKKQVESTLAMQNLQPKIKAIQERYKG-DQERIQ 179

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP- 470
               +LYK   +NPLAGC P L  +PV+  +Y+ +S  + E      + WI  LA     
Sbjct: 180 LETSRLYKQAGVNPLAGCLPTLATMPVWIGLYQALSNVANEGLLTEGFFWIPSLAGPTTI 239

Query: 471 ------TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQ-- 516
                 T I  LF    G  P          + P+++  S +I M++   P   D  Q  
Sbjct: 240 AARQNGTGISWLFPFVDGQPPLGWSDTFAYLVLPVLLVGSQYISMQIMQTPQANDPSQKN 299

Query: 517 -AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI----GLIDRLR 571
             + L ++P++  +   S P+GL IYW  +N +S  QQ  + K+ GA+          + 
Sbjct: 300 TQIALKFLPLMIGYFSLSVPSGLSIYWLTNNFLSTAQQLWLRKLGGAKPIVSEDGNGIIS 359

Query: 572 STFSKNYNSQ 581
           +  +K  +S+
Sbjct: 360 AGQAKRSSSK 369


>gi|239828709|ref|YP_002951333.1| OxaA-like protein precursor [Geobacillus sp. WCH70]
 gi|239809002|gb|ACS26067.1| 60 kDa inner membrane insertion protein [Geobacillus sp. WCH70]
          Length = 256

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           +      +  P       +   Y +    +++      L GNFG++I++ T+F++LL  P
Sbjct: 18  LISGCTQINEPITPESKGFWNEYIVYPLSWLIKYVANALGGNFGLSIVIVTIFIRLLILP 77

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPIL 434
           L  +Q  +   M+ +QP+I +LREK+     Q    LQ+ M+ L++ H +NP+AGC+PIL
Sbjct: 78  LMIQQTKNAKAMQALQPEIQKLREKYSSKDMQTQQKLQQEMMLLFQKHGVNPMAGCFPIL 137

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+    Y  I  + E+     + W  DL   DP                     I P
Sbjct: 138 IQMPILIGFYHAIMRTREIA-EHNFLWF-DLGEKDPYF-------------------ILP 176

Query: 495 IIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           I+  ++ FIQ K+        +   AM+L  MPV+ V    +FPA L +YW   N+ SIV
Sbjct: 177 IVAGITTFIQQKIMMAGAGQQNPQMAMMLWMMPVMIVIFAINFPAALSLYWVVGNIFSIV 236

Query: 552 QQAVI 556
           Q   I
Sbjct: 237 QTYFI 241


>gi|320009746|gb|ADW04596.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces
           flavogriseus ATCC 33331]
          Length = 418

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 35/260 (13%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
              F FI  P+  ++  F+ L            +G++I+   V +++   PL  KQ  ST
Sbjct: 5   ASLFSFITTPVSWVIVQFHKLYGALFGDDTGWAWGLSIVSLVVLIRICLIPLFVKQIKST 64

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            NM+ +QPK+  ++E++K    Q   + M++LYK    NPL+ C PIL Q P FFA+Y V
Sbjct: 65  RNMQVLQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHV 123

Query: 447 ISI-----SLEM---------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +S      ++ +         R A  +G    LAA    +   +  +        +   I
Sbjct: 124 LSAIASGKTIGVIDQPLLDSARQAHIFG--APLAAKFMDSEEKVSALGASLTDVRVVTAI 181

Query: 493 WPIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
             ++MS S F   +             P  + Q M++   PV+F     +FP G+++YW 
Sbjct: 182 MIVMMSASQFFTQRQLMTKNVDLTVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWL 241

Query: 544 WSNVISIVQQAVIMKMHGAE 563
            +NV ++ QQ  ++  +   
Sbjct: 242 TTNVWTMGQQMYVINQNPTP 261


>gi|294813736|ref|ZP_06772379.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|326442157|ref|ZP_08216891.1| putative inner membrane protein translocase component YidC
           [Streptomyces clavuligerus ATCC 27064]
 gi|294326335|gb|EFG07978.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
          Length = 415

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 26/248 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  +         +  +    +G++I+   V +++   PL  KQ  S  NM+ +QPK+  
Sbjct: 17  WIIVQFHKLYGAMFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSMRNMQALQPKMKA 76

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEM 453
           ++E++K    Q   + M++LYK    NPL+ C PIL Q P FFA+Y V+S      ++ +
Sbjct: 77  IQERYKN-DRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYYVLSNIASGKTVGV 135

Query: 454 ---------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
                    R A  +G    LAA    +   +  +        +   +  ++MS S F  
Sbjct: 136 INESLLESARQAHIFG--APLAAKFMDSEAKVASLDASLTTVRIVTAVMIVLMSASQFYT 193

Query: 505 MKMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
            +             P  + Q M++   PV+F     +FP G+++YW  +NV ++ QQ  
Sbjct: 194 QRQLMQKNVDLSVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMY 253

Query: 556 IMKMHGAE 563
           ++  +   
Sbjct: 254 VINQNPTP 261


>gi|115434560|ref|NP_001042038.1| Os01g0151200 [Oryza sativa Japonica Group]
 gi|54290223|dbj|BAD61111.1| putative PPF-1 protein [Oryza sativa Japonica Group]
 gi|113531569|dbj|BAF03952.1| Os01g0151200 [Oryza sativa Japonica Group]
          Length = 459

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 22/248 (8%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++  ++G AI+L TV VK    PL K+Q  ST  M+N+QP+I  +++++  +  + +Q  
Sbjct: 132 HVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPQIKAIQQRYAGN-QERIQLE 190

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNI 473
             +LYK   +NPLAGC+P L  IPV+  +Y+ +S  + E      + WI  L        
Sbjct: 191 TARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAA 250

Query: 474 FTLFGILPFYLPGF-----------MHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518
                 + + LP             +   + P+++  S F+ M++  PP   D  Q    
Sbjct: 251 RQSGAGISWLLPFVDGHPPLGWHDTICYLVLPVLLVASQFVSMEIMKPPQTDDPSQKNTL 310

Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI----DRLRST 573
            +L ++P +  +   S P+GL IYW  +N++S  QQ  + K+ GA+  +       + + 
Sbjct: 311 LVLKFLPFMIGWFSLSVPSGLSIYWFTNNILSTAQQVWLRKLGGAKPVVNQGGSGIITAG 370

Query: 574 FSKNYNSQ 581
            +K  ++Q
Sbjct: 371 RAKRTSAQ 378


>gi|224054791|ref|XP_002298365.1| inner membrane protein [Populus trichocarpa]
 gi|222845623|gb|EEE83170.1| inner membrane protein [Populus trichocarpa]
          Length = 451

 Score =  147 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 77/272 (28%), Positives = 132/272 (48%), Gaps = 28/272 (10%)

Query: 337 GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           GWF FI+  M  ++          ++   +G AI+L T+ VK+   PL KKQ  ST  M+
Sbjct: 97  GWFGFISDGMEFVLKVLKDGLSSVHVPYAYGFAIILLTIAVKVATLPLTKKQVESTLAMQ 156

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449
           N+QPKI  +++++  +  + +Q    +LY+   +NPLAGC+P L  IPV+  +Y+ +S  
Sbjct: 157 NLQPKIKAIQQRYAGN-QERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNV 215

Query: 450 SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPIIMS 498
           + E      + WI  L            + I  LF    G  P          + P+++ 
Sbjct: 216 ANEGVLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWHDTAAYLVLPVLLI 275

Query: 499 LSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            S ++ M++  PP   D  Q     +  ++P++  +   S P+GL IYW  +NV+S  QQ
Sbjct: 276 ASQYVSMEIMKPPQTDDPTQKNTLLVFKFLPIMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 335

Query: 554 AVIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581
             + K+ GA+  + +     + +  +K   SQ
Sbjct: 336 VWLRKLGGAKPVVNENASGIITAGRAKRSASQ 367


>gi|226495803|ref|NP_001152272.1| LOC100285911 [Zea mays]
 gi|195654525|gb|ACG46730.1| inner membrane protein ALBINO3 [Zea mays]
 gi|223974117|gb|ACN31246.1| unknown [Zea mays]
          Length = 459

 Score =  147 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 71/248 (28%), Positives = 124/248 (50%), Gaps = 22/248 (8%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++  ++G AI+L T+ VK    PL KKQ  ST  M+N+QP++  +++++  +  + +Q  
Sbjct: 131 HVPYSYGFAIILLTIIVKAATLPLTKKQVESTMAMQNLQPQLKAIQQRYAGN-QERIQLE 189

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470
             +LY+   +NPLAGC+P L  IPV+  +Y+ +S  + E      + WI  L        
Sbjct: 190 TARLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAA 249

Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518
                 I  LF    G  P      +   + P+++  S ++ M++  PP   D  Q    
Sbjct: 250 RQSGAGISWLFPFVDGHPPLGWYDTICYLVLPVLLVASQYVSMEIMKPPQSDDPSQKNTL 309

Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID----RLRST 573
            +L ++P +  +   S P+GL IYW  +NV+S  QQ  + KM GA+  + +     + + 
Sbjct: 310 LVLKFLPFMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKMGGAKPVVSEGDRRIITAG 369

Query: 574 FSKNYNSQ 581
            +K  N+Q
Sbjct: 370 RAKRSNAQ 377


>gi|148905926|gb|ABR16124.1| unknown [Picea sitchensis]
          Length = 471

 Score =  147 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 22/250 (8%)

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
             ++   +G AI+  TV VK+  FPL KKQ  ST  M+N+QPKI  ++E++K    + +Q
Sbjct: 121 TVHVPYAYGFAIITLTVLVKIATFPLTKKQVESTLAMQNLQPKIKAIQERYKG-DQERIQ 179

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP- 470
               +LYK   +NPLAGC P L  +PV+  +Y+ +S  + E      + WI  LA     
Sbjct: 180 LETSRLYKQAGVNPLAGCLPTLATMPVWIGLYQALSNVANEGLLTEGFFWIPSLAGPTTI 239

Query: 471 ------TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQ-- 516
                 T I  LF    G  P          + P+++  S +I M++   P   D  Q  
Sbjct: 240 AARQNGTGISWLFPFVDGQPPLGWSDTFAYLVLPVLLVGSQYISMQIMQTPQANDPSQKN 299

Query: 517 -AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI----GLIDRLR 571
             + L ++P++  +   S P+GL IYW  +N +S  QQ  + K+ GA+          + 
Sbjct: 300 TQIALKFLPLMIGYFSLSVPSGLSIYWLTNNFLSTAQQLWLRKLGGAKPIVSEDGNGIIS 359

Query: 572 STFSKNYNSQ 581
           +  +K  +S+
Sbjct: 360 AGQAKRSSSK 369


>gi|282863323|ref|ZP_06272382.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE]
 gi|282561658|gb|EFB67201.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE]
          Length = 423

 Score =  147 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 117/260 (45%), Gaps = 35/260 (13%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
              F FI  P+  ++  F+ L            +G++I+   V +++   PL  KQ  ST
Sbjct: 5   ASLFSFITTPVSWVIVQFHKLYGAIFGDDTGWAWGLSIVSLVVLIRICLIPLFVKQIKST 64

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            NM+ +QPK+  ++E++K    Q   + M++LYK    NPL+ C PIL Q P FFA+Y V
Sbjct: 65  RNMQVLQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHV 123

Query: 447 ISI-----SLEM---------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +S      ++ +         R A  +G    LAA    +   +  +        +   I
Sbjct: 124 LSAIASGKTIGVIDQPLLDSARQAHIFG--APLAAKFMDSDDKVAALGASLTDVRVVTAI 181

Query: 493 WPIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
             ++MS S F   +             P  + Q M++   P++F     +FP G+++YW 
Sbjct: 182 MIVMMSASQFFTQRQLMTKNVDLTVKTPYMQQQKMLMYIFPLIFAVMGINFPVGVLVYWL 241

Query: 544 WSNVISIVQQAVIMKMHGAE 563
            +NV ++ QQ  ++  +   
Sbjct: 242 TTNVWTMGQQMYVINQNPTP 261


>gi|108712061|gb|ABF99856.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|222626153|gb|EEE60285.1| hypothetical protein OsJ_13341 [Oryza sativa Japonica Group]
          Length = 510

 Score =  147 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 121/243 (49%), Gaps = 18/243 (7%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++   +G AI+L TV VK   FPL KKQ  S   M+++QP++  ++E++     + +Q  
Sbjct: 122 HVPYPYGFAIILLTVLVKAATFPLTKKQVESAIAMRSLQPQVKAIQERYAG-DQERIQLE 180

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTN- 472
             +LYK  +++PLAGC P L+ IPV+  +Y+ +S  + E      + WI  LA       
Sbjct: 181 TARLYKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAA 240

Query: 473 ------IFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQA--- 517
                 I  LF    G  P      +   + P+++ +S ++  ++  PP   D  Q    
Sbjct: 241 RQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQGAQ 300

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
            ++ ++P++  +   S P+GL +YW  +N++S  QQ  + K+ GA+  + + +     + 
Sbjct: 301 AVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYIDKLAKEE 360

Query: 578 YNS 580
             +
Sbjct: 361 STN 363


>gi|41469653|gb|AAS07376.1| putative inner membrane protein (with alternative splicing) [Oryza
           sativa Japonica Group]
 gi|108712060|gb|ABF99855.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 489

 Score =  147 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 121/243 (49%), Gaps = 18/243 (7%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++   +G AI+L TV VK   FPL KKQ  S   M+++QP++  ++E++     + +Q  
Sbjct: 122 HVPYPYGFAIILLTVLVKAATFPLTKKQVESAIAMRSLQPQVKAIQERYAG-DQERIQLE 180

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTN- 472
             +LYK  +++PLAGC P L+ IPV+  +Y+ +S  + E      + WI  LA       
Sbjct: 181 TARLYKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAA 240

Query: 473 ------IFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQA--- 517
                 I  LF    G  P      +   + P+++ +S ++  ++  PP   D  Q    
Sbjct: 241 RQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQGAQ 300

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
            ++ ++P++  +   S P+GL +YW  +N++S  QQ  + K+ GA+  + + +     + 
Sbjct: 301 AVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYIDKLAKEE 360

Query: 578 YNS 580
             +
Sbjct: 361 STN 363


>gi|307330013|ref|ZP_07609165.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces
           violaceusniger Tu 4113]
 gi|306884389|gb|EFN15423.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces
           violaceusniger Tu 4113]
          Length = 379

 Score =  147 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 26/248 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  +    F  + +  +    +G++I+   V +++   PL  KQ  ST NM+ +QPK+  
Sbjct: 14  WIIVQFHSFYSLIFDRDSGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQALQPKMKA 73

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE------ 452
           ++E++K    Q   + M++LYK    NPL+ C PIL Q P F ++Y+V++          
Sbjct: 74  IQERYKSDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFISLYQVLNHIANNKTVGV 132

Query: 453 --------MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
                    R+A  +G    +   D  +     G     +       I  I+MS S F  
Sbjct: 133 IDQNLLDSARNAHIFGAPLSVKFMDSASKVESLGASLTDVRIVTITMI--ILMSASQFFT 190

Query: 505 MKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
            +             P  + Q M++   PV+F     +FP G+++YW  +NV ++ QQ  
Sbjct: 191 QRQLMTKNVDLTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTLGQQMF 250

Query: 556 IMKMHGAE 563
           +++ +   
Sbjct: 251 VIRRNPTP 258


>gi|311032253|ref|ZP_07710343.1| OxaA-like protein precursor [Bacillus sp. m3-13]
          Length = 260

 Score =  146 bits (368), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 27/225 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           W  ++  P+  L++YF  L+ N +G++I++ T+ ++    PL  KQ  +   M+ +QP++
Sbjct: 36  WNEYVVYPLSWLITYFAELMNNDYGLSIIIVTLLIRFAILPLMIKQTKNAKAMQALQPEM 95

Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             LREK+        Q LQ+  + L++ H +NPLAGC+P+L+Q+P+    +  I+ + E+
Sbjct: 96  KALREKYSSKDQKTQQKLQQETMGLFQKHGVNPLAGCFPLLVQMPILIGFFHAITRTTEI 155

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
            +   + W  DL   DP                     I P++  ++ FIQ K+     D
Sbjct: 156 AN-HNFMWF-DLGDPDPYF-------------------ILPVVAGITTFIQQKIMMAGMD 194

Query: 514 KGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
               M++    MP++ V    +FPA L +YW   N+  IVQ   I
Sbjct: 195 NNPQMVMMLWIMPIMIVVFAINFPAALSLYWVVGNIFMIVQTYFI 239


>gi|218296522|ref|ZP_03497250.1| 60 kDa inner membrane insertion protein [Thermus aquaticus Y51MC23]
 gi|218243064|gb|EED09596.1| 60 kDa inner membrane insertion protein [Thermus aquaticus Y51MC23]
          Length = 430

 Score =  146 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 24/224 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  ++  +  LM   +   G++G+AI+  T+ V+LL +PL  +Q+ S A M+ +QP I +
Sbjct: 228 WGQLSLGLLWLMEMAFRYTGSWGLAILFLTLVVRLLLWPLMHQQFKSMAEMQRLQPLIQK 287

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           + EK+K  P +   +A ++LY+ H +NP AGC P+ +Q+P+ F ++KVI+   E      
Sbjct: 288 INEKYKDDPNKR-AEATMKLYQEHKVNPAAGCLPLFIQMPILFILWKVIAN-YEFGQ--G 343

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
             WI DLA  DP                     I P++   S  +   +S    +K    
Sbjct: 344 LLWIPDLALPDPYY-------------------ILPVLYVASTLLSTWLS-AHGNKDIIR 383

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
              ++ ++FVF +  FPAG+ +YW  SN+I + QQ +I K    
Sbjct: 384 QGLFINLIFVFLVLQFPAGVTLYWVLSNLIGLFQQWLINKSLKP 427


>gi|294668107|ref|ZP_06733214.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria
           elongata subsp. glycolytica ATCC 29315]
 gi|291309815|gb|EFE51058.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria
           elongata subsp. glycolytica ATCC 29315]
          Length = 409

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 80/417 (19%), Positives = 143/417 (34%), Gaps = 36/417 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+      V  A+S++I+  W+  +  P+      ++   Q                   
Sbjct: 1   MDI-KRMTVFFAVSLLILLGWEKIFPTPQPAVSAVQQAGQQQTS------------PTIP 47

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
               LS +  + +   ++   I+ K      L L  Y      + P    L        Y
Sbjct: 48  AETGLSPAVPITVSTDTVNAVIDEKSGDLRSLTLLKYDSAEDQSKPFT--LFHDGKDGIY 105

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ D V  A        +         +      ++L    AN I  ++  +     YL
Sbjct: 106 VAQSDVVDAAGRSLTQGLSFQSAKKQYSLEGDKAEVRLTANTANGIQIDKIYTFTKGSYL 165

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
             I   VTN S   IR     RI+R    P+          G +         + K+ D+
Sbjct: 166 VGIRFDVTNRSGSPIRTDGSYRIVRDGKAPEGQGYFMANYTGPVLYTPQSGFQKVKFGDL 225

Query: 238 EKS-------SISNFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284
           +         +       + W+G+S  Y+ S +I   +           +          
Sbjct: 226 DDDFKEGREQAEYERKTQSGWVGMSQHYFFSSWILQPKGGQSVCTTDACRIDIKRRSDNL 285

Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344
           Y A     +  +  G        L+AG +    +     +      E++ D+G  ++ A 
Sbjct: 286 YSAGVIVPQPELANGMKQGFGISLYAGPQTTSALGKIADN-----LELIKDYGRVHWPAT 340

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
            +F LM   +   GN+G AI+L T+ VK++ FPL    Y S A M+ + PK++ L+ 
Sbjct: 341 GLFWLMDKLHGFTGNWGWAIVLLTIIVKIVLFPLNNAAYKSMAKMRAVAPKLEALKN 397


>gi|149182294|ref|ZP_01860773.1| OxaA-like protein precursor [Bacillus sp. SG-1]
 gi|148849986|gb|EDL64157.1| OxaA-like protein precursor [Bacillus sp. SG-1]
          Length = 238

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 27/239 (11%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
           +   P  E    +   Y +     +++       G++G+ I++ T+ ++L   PL  KQ 
Sbjct: 2   EYNQPITEDNTGFWNEYIVYPLSLLIIKVSEFFDGSYGLGIIIVTLIIRLAILPLMIKQT 61

Query: 384 VSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
            ++  M+ +QP++ +LREK+        Q LQ+  + L++ H +NPLAGC+P+++Q+P+ 
Sbjct: 62  KNSKAMQALQPEMQKLREKYSSKDAQTQQKLQQETMGLFQKHGVNPLAGCFPLIVQMPIL 121

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
              Y  I  + E+++   + W  DL   DP                     + P+I  ++
Sbjct: 122 IGFYHAIVRTEEIKN-HTFLWF-DLGQPDPLY-------------------LLPLIAGVT 160

Query: 501 MFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            FIQ KM        +   AM+L  MPV+ +    +FPA L +YW   N+  I+Q   I
Sbjct: 161 TFIQQKMMMAGTANQNPQMAMMLYIMPVMIIIFAINFPAALSLYWVVGNIFMIIQTYFI 219


>gi|38372402|sp|Q9FY06|PPF1_PEA RecName: Full=Inner membrane protein PPF-1, chloroplastic; AltName:
           Full=Post-floral-specific protein 1; Flags: Precursor
 gi|2231046|emb|CAA73179.1| PPF-1 protein [Pisum sativum]
          Length = 442

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 82/348 (23%), Positives = 146/348 (41%), Gaps = 35/348 (10%)

Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327
            T   S  +  S    R   K   +   + P +S++ +  L         + +   D  +
Sbjct: 13  GTPLPSLHRTFSPNRTRLFTKVQFSFHQLPPIQSVSHSVDLSGIFARAEGLLYTLADATV 72

Query: 328 PRFEMLIDW-------GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLL 374
                           GWF FI+  M  ++          ++  ++G AI+L TV VK  
Sbjct: 73  AADAAASTDVAAQKNGGWFGFISDGMEFVLKVLKDGLSSVHVPYSYGFAIILLTVIVKAA 132

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434
             PL K+Q  ST  M+N+QPKI  ++E++  +  + +Q    +LY    +NPLAGC P L
Sbjct: 133 TLPLTKQQVESTLAMQNLQPKIKAIQERYAGN-QERIQLETSRLYTQAGVNPLAGCLPTL 191

Query: 435 LQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-- 491
             IPV+  +Y+ +S  + E      + WI  L              + +  P        
Sbjct: 192 ATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPLL 251

Query: 492 ---------IWPIIMSLSMFIQMKMS--PPPADKGQAM---ILNWMPVVFVFALSSFPAG 537
                    + P+++ +S ++ M++   P   D  Q     I  ++P++  +   S P+G
Sbjct: 252 GWYDTAAYLVLPVLLIVSQYVSMEIMKPPQTNDPNQKNTLLIFKFLPLMIGYFSLSVPSG 311

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581
           L IYW  +NV+S  QQ  + K+ GA+  + +     + +  +K   S+
Sbjct: 312 LTIYWFTNNVLSTAQQVWLRKLGGAKPAVNENAGGIITAGQAKRSASK 359


>gi|310830139|ref|YP_003962496.1| 60 kDa inner membrane insertion protein [Eubacterium limosum
           KIST612]
 gi|308741873|gb|ADO39533.1| 60 kDa inner membrane insertion protein [Eubacterium limosum
           KIST612]
          Length = 307

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 68/246 (27%), Positives = 119/246 (48%), Gaps = 36/246 (14%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            + + +    ++   YN V N+G+A++L T+ VK    PL  KQ  S   M+ +QP++ +
Sbjct: 1   MHILYQAFGFVLFQIYNFVQNYGVAVILFTILVKFCILPLNIKQTKSMREMQALQPELQK 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY--------KVISIS 450
           L++K+K +P + L +  ++LYK +N++P+AGC P+L+Q+P+ +A++         V +  
Sbjct: 61  LQKKYKNNPEK-LNQETMKLYKLYNVSPMAGCLPLLIQLPIIYALFGALRDPGKWVFTNG 119

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
                +  + WI DL   DP                     I PI+  +  FI  K +  
Sbjct: 120 DVSAISQQFLWIPDLGNPDPWY-------------------ILPILCVVFTFITQKFTMS 160

Query: 511 ----PADK----GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
                 D      Q M+L  MP+   FA    PAG+ +YW   NV + VQQ ++++    
Sbjct: 161 VQKGTMDPSAEKTQNMMLYIMPIFIGFAAIGMPAGVALYWVVQNVFTFVQQFIMLRKPAE 220

Query: 563 EIGLID 568
           +I   +
Sbjct: 221 KIDPRE 226


>gi|302543969|ref|ZP_07296311.1| membrane protein OxaA [Streptomyces hygroscopicus ATCC 53653]
 gi|302461587|gb|EFL24680.1| membrane protein OxaA [Streptomyces himastatinicus ATCC 53653]
          Length = 378

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 26/248 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  +    F  + +  N    +G++I+   V +++   PL  KQ  +T NM+ +QPK+  
Sbjct: 14  WIIVQFHSFYSLIFDRNSGWAWGLSIVSLVVLIRICLIPLFVKQIKATRNMQALQPKMKA 73

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE------ 452
           ++E++K    Q   + M++LYK    NPL+ C PIL Q P F A+Y+V++          
Sbjct: 74  IQERYKSDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFIALYQVLNHIANNKTVGV 132

Query: 453 --------MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
                    R+A  +G    +   D  +     G     +       I  ++MS S F  
Sbjct: 133 IDQSLLDSARNAHIFGAPLSVKFMDSASKVESLGASLTDVRVVTITMI--VLMSASQFFT 190

Query: 505 MKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
            +             P  + Q M++   P++F     +FP G+++YW  +NV ++ QQ  
Sbjct: 191 QRQLMTKNVDLSVKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLVYWLTTNVWTLGQQMF 250

Query: 556 IMKMHGAE 563
           +++ +   
Sbjct: 251 VIRRNPTP 258


>gi|297193299|ref|ZP_06910697.1| membrane protein oxaA [Streptomyces pristinaespiralis ATCC 25486]
 gi|197718384|gb|EDY62292.1| membrane protein oxaA [Streptomyces pristinaespiralis ATCC 25486]
          Length = 432

 Score =  145 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 37/261 (14%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
              F FI  P+  ++  F+ L            +G++I+   + +++   PL  KQ  ST
Sbjct: 5   ASLFSFITTPVSWIIVQFHKLYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKST 64

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            NM+ +QPK+  ++E++K    Q   + M++LYK    NPL+ C PIL Q P FFA+Y V
Sbjct: 65  RNMQALQPKMKAIQERYKN-DRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHV 123

Query: 447 IS--------------ISLEMRHAPFWG-WIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491
           +S              +    R+A  +G  I      DP+ +  L   L       +   
Sbjct: 124 LSKIASGNEIGVLNQSLVDSARNAHIFGAPIASKFMDDPSKVEALNASL---TDVRIVTA 180

Query: 492 IWPIIMSLSMFIQMKMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
           I  I+MS S F   +             P  + Q M++   P++F     +FP G+++YW
Sbjct: 181 IMIILMSASQFYTQRQLMQKNVDLTVKTPYMQQQKMLMYIFPLIFAVMGINFPVGVLVYW 240

Query: 543 SWSNVISIVQQAVIMKMHGAE 563
             +NV ++ QQ  ++  +   
Sbjct: 241 LTTNVWTMGQQMYVINQNPTP 261


>gi|297618524|ref|YP_003703683.1| membrane protein insertase, YidC/Oxa1 family [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297146361|gb|ADI03118.1| membrane protein insertase, YidC/Oxa1 family [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 259

 Score =  145 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 72/246 (29%), Positives = 120/246 (48%), Gaps = 28/246 (11%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           +        A  +         + + N+G AI+L T+ +KLL +PL  KQ  S   M+ +
Sbjct: 1   MWSSIVQGFADLIQGFYHITVAIGLPNYGFAIILVTIAIKLLLYPLTHKQMKSMRKMQEL 60

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---I 449
           QP++  L+E++ +  PQ +QK +  LYK H ++PL+GC P+L+Q+P+  A Y+ +     
Sbjct: 61  QPRLKLLQERY-KEDPQRMQKEVFDLYKEHGVSPLSGCLPLLIQLPILVAFYRALYQLKY 119

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           ++   HA  + W+  L+  DP   F                    I+  ++ +IQ K+S 
Sbjct: 120 TV-PAHA-AFLWVPTLSKPDPYYGF-------------------AILAGVTTYIQQKLST 158

Query: 510 -PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM-KMHGAEIGLI 567
             P D  Q  +L  MPV   +  ++ PAGL +YW   NV+SI QQA +  +  G +    
Sbjct: 159 LDPNDPSQKSMLYVMPVFIAWLAATLPAGLALYWVTFNVLSIAQQAWVNARSGGTKDSPD 218

Query: 568 DRLRST 573
            R+   
Sbjct: 219 GRVERG 224


>gi|30023510|ref|NP_835141.1| OxaA-like protein precursor [Bacillus cereus ATCC 14579]
 gi|229130732|ref|ZP_04259685.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-Cer4]
 gi|38502939|sp|Q814F4|OXAA1_BACCR RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|29899071|gb|AAP12342.1| 60 kDa inner membrane protein YIDC [Bacillus cereus ATCC 14579]
 gi|228652749|gb|EEL08634.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-Cer4]
          Length = 258

 Score =  145 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     +   P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 17  IATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLP 76

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 77  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E++    + W  DL  ADP                     I P
Sbjct: 137 VQMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPFY-------------------ILP 175

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM+L  MP++ +    +FPA L +YW   N+  I 
Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235

Query: 552 QQAVI 556
           Q   I
Sbjct: 236 QMYFI 240


>gi|302801394|ref|XP_002982453.1| hypothetical protein SELMODRAFT_12955 [Selaginella moellendorffii]
 gi|300149552|gb|EFJ16206.1| hypothetical protein SELMODRAFT_12955 [Selaginella moellendorffii]
          Length = 306

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 17/221 (7%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +G AI+L TV VK+L FPL K Q  ST +M+N+QPK+  +++++     + +Q    +LY
Sbjct: 65  YGFAIILLTVLVKVLTFPLTKSQAESTISMQNLQPKLKAIQQRYAG-DQERIQMETARLY 123

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP-------T 471
           K   +NPLAGC P L  +PV+  +Y+ +S  + E   +  + WI  LA           +
Sbjct: 124 KQAGVNPLAGCLPTLATLPVWIGLYRALSNVANEGLLSEGFFWIPSLAGPTTIAARQSGS 183

Query: 472 NIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFI-QMKMSPPPADKGQAM---ILNWM 523
            I  LF    G  P      +   + P+++  S +     M PP  D  Q     IL ++
Sbjct: 184 GISWLFPFVDGHPPLGWGDTIAYLVLPVLLIGSQYASMQIMQPPQTDPSQKNTQLILKFL 243

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           P++  +   S P+GL +YW  +N++S  QQ  + K+ GA+ 
Sbjct: 244 PLMIGYFALSVPSGLSLYWLTNNILSTGQQVWLRKLGGAKP 284


>gi|258517431|ref|YP_003193653.1| 60 kDa inner membrane insertion protein [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257781136|gb|ACV65030.1| 60 kDa inner membrane insertion protein [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 223

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 70/204 (34%), Positives = 114/204 (55%), Gaps = 21/204 (10%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV-LQKAM 415
           + N+G+AI+L TV +K+L +PL KKQ +S  +M+ +QPKI EL+ K+K    Q  +Q+  
Sbjct: 27  IPNYGLAIILLTVIIKMLLYPLTKKQMLSMRSMQQLQPKIKELQNKYKGKDQQQIMQQKT 86

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP-FWGWIKDLAAADPTNIF 474
           ++LYK HNINP+AGC P+L+Q+P+  A+Y+ +     +  A   + W+ +L+  DP    
Sbjct: 87  MELYKEHNINPMAGCLPLLIQMPILIALYRALYNFKYLNTAHANFLWVPNLSNVDPW--- 143

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534
                            I PI+   S ++Q K++   +D  Q ++L  MP+   +     
Sbjct: 144 ----------------VILPILAGASTYLQSKLTTTTSDPTQQIMLYTMPLFIGYISYKM 187

Query: 535 PAGLIIYWSWSNVISIVQQAVIMK 558
           PAGL +YW   N++  +QQ  I K
Sbjct: 188 PAGLALYWVVFNLVGAIQQYYINK 211


>gi|56422031|ref|YP_149349.1| OxaA-like protein [Geobacillus kaustophilus HTA426]
 gi|261420905|ref|YP_003254587.1| OxaA-like protein precursor [Geobacillus sp. Y412MC61]
 gi|297531689|ref|YP_003672964.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
           C56-T3]
 gi|319768575|ref|YP_004134076.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
           Y412MC52]
 gi|56381873|dbj|BAD77781.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426]
 gi|261377362|gb|ACX80105.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
           Y412MC61]
 gi|297254941|gb|ADI28387.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
           C56-T3]
 gi|317113441|gb|ADU95933.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
           Y412MC52]
          Length = 254

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 28/226 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           W  +I  P+  L+ Y   L+G +FG++I++ T+ ++LL  PL  +Q  +   M+ +QP+I
Sbjct: 36  WNEYIVYPLSWLIKYVAGLLGGSFGLSIIVVTILIRLLILPLMIQQTRNAKAMQALQPEI 95

Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           + LR+K+        Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+    Y  I  + E+
Sbjct: 96  EALRKKYSSKDAQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPILIGFYHAIMRTREI 155

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510
                + W  DL   DP                     I P+I  ++ FIQ K+      
Sbjct: 156 AQ-HNFLWF-DLGEKDPYY-------------------ILPVIAGVTTFIQQKIMMAGSA 194

Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             +   AM+L  MP++ V    +FPA L +YW   N+ SIVQ  +I
Sbjct: 195 QQNPQMAMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIVQTYLI 240


>gi|169832372|ref|YP_001718354.1| 60 kDa inner membrane insertion protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169639216|gb|ACA60722.1| 60 kDa inner membrane insertion protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 300

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 119/230 (51%), Gaps = 31/230 (13%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           + ++GIAI+L T+ +K+   PL + Q  S A M  +QP+I  +++++ +   Q+  K ++
Sbjct: 25  LPSYGIAIVLLTILIKIFLHPLTRIQMRSMAKMSQLQPEIKAIQDRYGKDKQQMQTK-IM 83

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRHAPFWGWIKDLAAADPTNIF 474
           +LYK   +NP+AGC  +L+Q+P   A+Y+ +     +   HA  + W+ DL   DP    
Sbjct: 84  ELYKERKVNPMAGCLLLLVQLPFMIALYQALWNFDYVNPAHAG-FLWVADLKKTDPLY-- 140

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--------PPADKGQAMILNWMPVV 526
                            I P++ +++ F+Q K++         P  ++ Q ++L  MP+ 
Sbjct: 141 -----------------ILPVLAAVTTFVQFKLTMSVSKGGGNPSQEQMQKVMLTVMPLF 183

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
                ++ PAGL +YW   N++SIVQQ  I K   A+   +++ R   ++
Sbjct: 184 IGGISATLPAGLSVYWVTFNLVSIVQQFFINKQILADQSAMEQQREKAAR 233


>gi|311070645|ref|YP_003975568.1| OxaA-like protein precursor [Bacillus atrophaeus 1942]
 gi|310871162|gb|ADP34637.1| OxaA-like protein precursor [Bacillus atrophaeus 1942]
          Length = 249

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 27/246 (10%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +      +  P       +   Y +     ++         N+G++I++ TV ++LL  
Sbjct: 6   VLLAGCSSVKEPITANSPHFWDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTVLIRLLIL 65

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPI 433
           PL  KQ  S+  M+ +QP++ +L+EK+     +  Q+     + L+  H +NPLAGC+PI
Sbjct: 66  PLMIKQLRSSKAMQALQPEMQKLKEKYSSKDQKTQQQLQQETMALFSKHGVNPLAGCFPI 125

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+P+    Y  I  +  +     + W  DL   DP                     I 
Sbjct: 126 LIQMPILIGFYHAIMRTQAI-SEHSFLWF-DLGEKDPYY-------------------IL 164

Query: 494 PIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           PI+  ++ F+Q K+        +   AM+L  MP++ +    SFPA L +YW   N+  I
Sbjct: 165 PIVAGVATFVQQKLMMAGNATQNPQMAMMLWIMPIMIIVFAISFPAALSLYWVVGNLFMI 224

Query: 551 VQQAVI 556
            Q  +I
Sbjct: 225 AQTFLI 230


>gi|228955736|ref|ZP_04117731.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229072951|ref|ZP_04206147.1| Membrane protein oxaA 1 [Bacillus cereus F65185]
 gi|229181732|ref|ZP_04309055.1| Membrane protein oxaA 1 [Bacillus cereus 172560W]
 gi|229193737|ref|ZP_04320678.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 10876]
 gi|228589762|gb|EEK47640.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 10876]
 gi|228601765|gb|EEK59263.1| Membrane protein oxaA 1 [Bacillus cereus 172560W]
 gi|228710197|gb|EEL62175.1| Membrane protein oxaA 1 [Bacillus cereus F65185]
 gi|228803964|gb|EEM50588.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 255

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     +   P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 17  IATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLP 76

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 77  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E++    + W  DL  ADP                     I P
Sbjct: 137 IQMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPFY-------------------ILP 175

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM+L  MP++ +    +FPA L +YW   N+  I 
Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235

Query: 552 QQAVI 556
           Q   I
Sbjct: 236 QMYFI 240


>gi|309811342|ref|ZP_07705129.1| membrane protein insertase, YidC/Oxa1 family [Dermacoccus sp.
           Ellin185]
 gi|308434649|gb|EFP58494.1| membrane protein insertase, YidC/Oxa1 family [Dermacoccus sp.
           Ellin185]
          Length = 387

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 58/275 (21%), Positives = 116/275 (42%), Gaps = 25/275 (9%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            E  +      +      + +         + ++I    + +++L  PL  KQ  ++  M
Sbjct: 8   LEWFVAAIMVGWHKLFSLVGLPEASGWT--WALSIAGLVIVLRILLIPLFVKQIHASRRM 65

Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + +QP++ +++ K+K           Q+ M++LY+T   NPL  C PILLQ P FFA+++
Sbjct: 66  QLVQPEMQKIQAKYKGKKDPESRAKQQEEMMELYRTTGTNPLGSCLPILLQAPFFFALFR 125

Query: 446 VISIS---LEMRHAPFWGWIKDLAAADPTNIF------TLFGILPFYLPGFMHVGIWPII 496
           V++      + RH       + LA    ++          F     +        +  ++
Sbjct: 126 VLNNLSKIADGRHDEIGFLTRSLAGQAESSKLFGAKLSDTFMGTDGWGSAKWVAILLIVL 185

Query: 497 MSLSMFIQM----KMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546
           MS + FI      + + P      P  K Q +I+  MP+ F  +  +FP G++IYW  +N
Sbjct: 186 MSATSFITQHQLMRRNMPKAALEGPMAKQQQIIIYLMPIFFAISGVNFPIGVLIYWFVTN 245

Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           V ++ QQ  ++          ++     ++    +
Sbjct: 246 VWTMGQQWFVIHRMPTPGSAAEKKLEERNRAKGRE 280


>gi|218232510|ref|YP_002370261.1| OxaA-like protein precursor [Bacillus cereus B4264]
 gi|228924231|ref|ZP_04087502.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228961750|ref|ZP_04123353.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229051155|ref|ZP_04194699.1| Membrane protein oxaA 1 [Bacillus cereus AH676]
 gi|229112899|ref|ZP_04242430.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-15]
 gi|229148036|ref|ZP_04276375.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST24]
 gi|229153645|ref|ZP_04281821.1| Membrane protein oxaA 1 [Bacillus cereus m1550]
 gi|296505914|ref|YP_003667614.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171]
 gi|218160467|gb|ACK60459.1| stage III sporulation protein J [Bacillus cereus B4264]
 gi|228629831|gb|EEK86484.1| Membrane protein oxaA 1 [Bacillus cereus m1550]
 gi|228635461|gb|EEK91952.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST24]
 gi|228670578|gb|EEL25891.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-15]
 gi|228722218|gb|EEL73619.1| Membrane protein oxaA 1 [Bacillus cereus AH676]
 gi|228797944|gb|EEM44954.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228835449|gb|EEM80819.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296326966|gb|ADH09894.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171]
          Length = 258

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     ++  P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 17  ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFNSNYGLAIVVTTLIIRFALLP 76

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 77  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E++    + W  DL  ADP                     I P
Sbjct: 137 IQMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPFY-------------------ILP 175

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM+L  MP++ +    +FPA L +YW   N+  I 
Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235

Query: 552 QQAVI 556
           Q   I
Sbjct: 236 QMYFI 240


>gi|297200935|ref|ZP_06918332.1| membrane protein [Streptomyces sviceus ATCC 29083]
 gi|197716893|gb|EDY60927.1| membrane protein [Streptomyces sviceus ATCC 29083]
          Length = 428

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
             +G++I+   + +++   PL  KQ  ST  M+ +QP++ +++E++K    Q   + M++
Sbjct: 36  WAWGLSIVSLVILIRICLIPLFVKQIKSTRAMQTLQPEMKKIQERYKNDK-QRQSEEMMK 94

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEM---------RHAPFWGWIK 463
           LYK    NPL+ C PIL Q P FFA+Y V++      ++ +         R A  +G   
Sbjct: 95  LYKETGTNPLSSCLPILAQSPFFFALYHVLNGIATGDTIGVINESLLASARKAHIFG--A 152

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PADK 514
            LAA       T+  +        +   +  ++MS S F   +             P  +
Sbjct: 153 PLAAKFKDGSATVQALGATVTDVRVVTAVMIVMMSASQFYTQRQLMTKNVDTTVKTPFMQ 212

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            Q M++   PV+F     +FP G+++YW  +NV ++ QQ  ++  +   
Sbjct: 213 QQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMYVIHNNPTP 261


>gi|42784682|ref|NP_981929.1| OxaA-like protein precursor [Bacillus cereus ATCC 10987]
 gi|42740614|gb|AAS44537.1| stage III sporulation protein J [Bacillus cereus ATCC 10987]
          Length = 255

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 27/258 (10%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
              L A       I     ++  P           YF+     ++  +      N+G+AI
Sbjct: 4   KIGLLAMVIALMAIATGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAI 63

Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421
           ++TT+ ++    PL  KQ  ST  M+++QP++ +L+EK+        Q LQ+ M+QLY+ 
Sbjct: 64  VVTTLIIRFALLPLMIKQTKSTKAMQSLQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           + +NPLAGC PI +Q+P+ FA Y  I  + E++    + W  DL  ADP           
Sbjct: 124 NGVNPLAGCLPIFIQMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPYY--------- 172

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538
                     I PI+ +++ FIQ K++       +   AM++  MP++ +    +FPA L
Sbjct: 173 ----------ILPIVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAAL 222

Query: 539 IIYWSWSNVISIVQQAVI 556
            +YW   N+  I Q   I
Sbjct: 223 SLYWVVGNIFGIAQMYFI 240


>gi|172059050|ref|YP_001815510.1| 60 kDa inner membrane insertion protein [Exiguobacterium sibiricum
           255-15]
 gi|171991571|gb|ACB62493.1| 60 kDa inner membrane insertion protein [Exiguobacterium sibiricum
           255-15]
          Length = 284

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 27/249 (10%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           W ++   PM  L+    +    ++GI I++TT+ V+L+  PL  KQ  S   M+ IQP++
Sbjct: 43  WKHYFVWPMAWLIREISHFFNGDYGIGIIVTTLLVRLVILPLMIKQTKSMGGMQVIQPEM 102

Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
            +LREK+        Q LQ+ M++LY+ HN+NPLAGC PIL+Q+P+  A Y  I  +  +
Sbjct: 103 VKLREKYSSKDQETQQKLQQEMMKLYQEHNVNPLAGCLPILIQMPILIAFYNAIIYTPAI 162

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
                + W  DL   DP                     I PI+ ++  ++Q K+S    D
Sbjct: 163 FQ-HTFLWF-DLGKPDPYF-------------------ILPILSAIFTYLQQKLSMAGQD 201

Query: 514 KG-QAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
              Q  I+ +  P++      + P+ L +YW    + SI+    IMK    +I       
Sbjct: 202 DNPQMKIMLYVFPIMIFVMGVTLPSALSLYWVVGYIFSIIVTIAIMKPMREKIKAQTEAT 261

Query: 572 STFSKNYNS 580
               +   +
Sbjct: 262 IASKREQEA 270


>gi|229099913|ref|ZP_04230836.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-29]
 gi|229118976|ref|ZP_04248321.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-3]
 gi|228664501|gb|EEL19997.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-3]
 gi|228683528|gb|EEL37483.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-29]
          Length = 255

 Score =  143 bits (360), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     ++  P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 17  ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFAELFGKNYGLAIVVTTLIIRFALLP 76

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK         Q LQ+ M+QLY+ + INPLAGC PI 
Sbjct: 77  LMIKQTKSTKAMQALQPEMVKLKEKHSSKDQATQQKLQQEMMQLYQKNGINPLAGCLPIF 136

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 175

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM++  MP++ +    +FPA L +YW   N+  I 
Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235

Query: 552 QQAVI 556
           Q   I
Sbjct: 236 QMYFI 240


>gi|30265504|ref|NP_847881.1| OxaA-like protein precursor [Bacillus anthracis str. Ames]
 gi|47778431|ref|YP_022422.2| OxaA-like protein precursor [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49188323|ref|YP_031576.1| OxaA-like protein precursor [Bacillus anthracis str. Sterne]
 gi|49481123|ref|YP_039476.1| OxaA-like protein precursor [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52145294|ref|YP_086751.1| OxaA-like protein precursor [Bacillus cereus E33L]
 gi|65317467|ref|ZP_00390426.1| COG0706: Preprotein translocase subunit YidC [Bacillus anthracis
           str. A2012]
 gi|118480513|ref|YP_897664.1| OxaA-like protein precursor [Bacillus thuringiensis str. Al Hakam]
 gi|165873027|ref|ZP_02217648.1| stage III sporulation protein J [Bacillus anthracis str. A0488]
 gi|167635063|ref|ZP_02393380.1| stage III sporulation protein J [Bacillus anthracis str. A0442]
 gi|167641749|ref|ZP_02399992.1| stage III sporulation protein J [Bacillus anthracis str. A0193]
 gi|170689464|ref|ZP_02880654.1| stage III sporulation protein J [Bacillus anthracis str. A0465]
 gi|170707538|ref|ZP_02897991.1| stage III sporulation protein J [Bacillus anthracis str. A0389]
 gi|177655281|ref|ZP_02936835.1| stage III sporulation protein J [Bacillus anthracis str. A0174]
 gi|190569283|ref|ZP_03022177.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I]
 gi|196036094|ref|ZP_03103494.1| stage III sporulation protein J [Bacillus cereus W]
 gi|196041960|ref|ZP_03109247.1| stage III sporulation protein J [Bacillus cereus NVH0597-99]
 gi|196045495|ref|ZP_03112726.1| stage III sporulation protein J [Bacillus cereus 03BB108]
 gi|218906678|ref|YP_002454512.1| stage III sporulation protein J [Bacillus cereus AH820]
 gi|227818255|ref|YP_002818264.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684]
 gi|228918098|ref|ZP_04081626.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228930492|ref|ZP_04093492.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228936766|ref|ZP_04099557.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229124989|ref|ZP_04254163.1| Membrane protein oxaA 1 [Bacillus cereus 95/8201]
 gi|229187715|ref|ZP_04314851.1| Membrane protein oxaA 1 [Bacillus cereus BGSC 6E1]
 gi|229601905|ref|YP_002869695.1| stage III sporulation protein J [Bacillus anthracis str. A0248]
 gi|254687073|ref|ZP_05150931.1| OxaA-like protein precursor [Bacillus anthracis str. CNEVA-9066]
 gi|254735161|ref|ZP_05192871.1| OxaA-like protein precursor [Bacillus anthracis str. Western North
           America USA6153]
 gi|254742130|ref|ZP_05199817.1| OxaA-like protein precursor [Bacillus anthracis str. Kruger B]
 gi|254755960|ref|ZP_05207992.1| OxaA-like protein precursor [Bacillus anthracis str. Vollum]
 gi|254761360|ref|ZP_05213382.1| OxaA-like protein precursor [Bacillus anthracis str. Australia 94]
 gi|38502943|sp|Q81JH1|OXAA1_BACAN RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|30260182|gb|AAP29367.1| stage III sporulation protein J [Bacillus anthracis str. Ames]
 gi|47552136|gb|AAT34897.2| stage III sporulation protein J [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49182250|gb|AAT57626.1| stage III sporulation protein J [Bacillus anthracis str. Sterne]
 gi|49332679|gb|AAT63325.1| stage III sporulation protein J [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51978763|gb|AAU20313.1| stage III sporulation protein J [Bacillus cereus E33L]
 gi|118419738|gb|ABK88157.1| protein translocase subunit yidC [Bacillus thuringiensis str. Al
           Hakam]
 gi|164711239|gb|EDR16795.1| stage III sporulation protein J [Bacillus anthracis str. A0488]
 gi|167510303|gb|EDR85706.1| stage III sporulation protein J [Bacillus anthracis str. A0193]
 gi|167529537|gb|EDR92287.1| stage III sporulation protein J [Bacillus anthracis str. A0442]
 gi|170127534|gb|EDS96408.1| stage III sporulation protein J [Bacillus anthracis str. A0389]
 gi|170666566|gb|EDT17339.1| stage III sporulation protein J [Bacillus anthracis str. A0465]
 gi|172080208|gb|EDT65300.1| stage III sporulation protein J [Bacillus anthracis str. A0174]
 gi|190559590|gb|EDV13581.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I]
 gi|195991261|gb|EDX55229.1| stage III sporulation protein J [Bacillus cereus W]
 gi|196023702|gb|EDX62378.1| stage III sporulation protein J [Bacillus cereus 03BB108]
 gi|196027215|gb|EDX65835.1| stage III sporulation protein J [Bacillus cereus NVH0597-99]
 gi|218536479|gb|ACK88877.1| stage III sporulation protein J [Bacillus cereus AH820]
 gi|227003597|gb|ACP13340.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684]
 gi|228595783|gb|EEK53467.1| Membrane protein oxaA 1 [Bacillus cereus BGSC 6E1]
 gi|228658490|gb|EEL14156.1| Membrane protein oxaA 1 [Bacillus cereus 95/8201]
 gi|228822975|gb|EEM68816.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829211|gb|EEM74848.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228841578|gb|EEM86694.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229266313|gb|ACQ47950.1| stage III sporulation protein J [Bacillus anthracis str. A0248]
          Length = 255

 Score =  143 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     ++  P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 17  ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 77  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 175

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM+L  MP++ +    +FPA L +YW   N+  I 
Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235

Query: 552 QQAVI 556
           Q  +I
Sbjct: 236 QMYLI 240


>gi|254724144|ref|ZP_05185929.1| OxaA-like protein precursor [Bacillus anthracis str. A1055]
          Length = 255

 Score =  143 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     ++  P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 17  ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QPK+ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 77  LMIKQTKSTKAMQALQPKMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 175

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM+L  MP++ +    +FPA L +YW   N+  I 
Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235

Query: 552 QQAVI 556
           Q  +I
Sbjct: 236 QMYLI 240


>gi|320449653|ref|YP_004201749.1| 60 kDa inner membrane insertion protein [Thermus scotoductus SA-01]
 gi|320149822|gb|ADW21200.1| 60 kDa inner membrane insertion protein [Thermus scotoductus SA-01]
          Length = 431

 Score =  143 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 24/224 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  ++  +  LM   +   G++G+AI+  T+ V+LL +PL  +Q+ S A M+ +QP I +
Sbjct: 229 WGQLSLGLLWLMEVAFRHTGSWGLAILFLTLVVRLLLWPLMHQQFKSMAEMQRLQPLIQK 288

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           + EK+K  P +   +A ++LY+ H +NP AGC P+ +Q+P+ F ++KVI+   E      
Sbjct: 289 INEKYKDDPNKR-AEATMKLYQEHKVNPAAGCLPLFIQMPILFILWKVIAN-YEFGQ--G 344

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
             WI DLA  DP                     I P +   S F+   +S    +K    
Sbjct: 345 LLWIPDLALPDPFY-------------------ILPALYVASTFLSTWLS-AHGNKDLIR 384

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
              +M ++F+F +  FP+G+ +YW  SN+I +VQQ +I K    
Sbjct: 385 QSLFMNLIFIFLVLQFPSGVTLYWVLSNLIGLVQQWLINKSLKP 428


>gi|228994205|ref|ZP_04154105.1| Membrane protein oxaA 1 [Bacillus pseudomycoides DSM 12442]
 gi|228765657|gb|EEM14311.1| Membrane protein oxaA 1 [Bacillus pseudomycoides DSM 12442]
          Length = 246

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 74/245 (30%), Positives = 119/245 (48%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     +   P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 8   IATGCNETNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 67

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLYKTH +NPLAGC PI 
Sbjct: 68  LMIKQTKSTKAMQVLQPEMAKLKEKYSSKDQATQQKLQQEMMQLYKTHGVNPLAGCLPIF 127

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E++    + W  DL  ADP                     I P
Sbjct: 128 IQMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPYY-------------------ILP 166

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           I+ +++ FIQ K++       +   AM++  MP++ +    +FPA L +YW   N+  I 
Sbjct: 167 IVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIA 226

Query: 552 QQAVI 556
           Q  +I
Sbjct: 227 QMYMI 231


>gi|228995394|ref|ZP_04155066.1| Membrane protein oxaA 1 [Bacillus mycoides Rock3-17]
 gi|229003008|ref|ZP_04160867.1| Membrane protein oxaA 1 [Bacillus mycoides Rock1-4]
 gi|228758236|gb|EEM07422.1| Membrane protein oxaA 1 [Bacillus mycoides Rock1-4]
 gi|228764347|gb|EEM13222.1| Membrane protein oxaA 1 [Bacillus mycoides Rock3-17]
          Length = 246

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 74/245 (30%), Positives = 119/245 (48%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     +   P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 8   IATGCNETNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 67

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLYKTH +NPLAGC PI 
Sbjct: 68  LMIKQTKSTKAMQALQPEMAKLKEKYSSKDQATQQKLQQEMMQLYKTHGVNPLAGCLPIF 127

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E++    + W  DL  ADP                     I P
Sbjct: 128 IQMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPYY-------------------ILP 166

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           I+ +++ FIQ K++       +   AM++  MP++ +    +FPA L +YW   N+  I 
Sbjct: 167 IVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIA 226

Query: 552 QQAVI 556
           Q  +I
Sbjct: 227 QMYMI 231


>gi|196249890|ref|ZP_03148586.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16]
 gi|196210766|gb|EDY05529.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16]
          Length = 254

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 69/240 (28%), Positives = 118/240 (49%), Gaps = 27/240 (11%)

Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382
            ++  P  +    +   Y +    +++      L G+FG++I++ T+ ++LL  PL  +Q
Sbjct: 22  TEINEPITQESKGFWNEYIVYPLSWLIKYVAELLGGSFGLSIIVVTILIRLLILPLMIQQ 81

Query: 383 YVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
             +   M+ +QP+I+ LR+K+        Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+
Sbjct: 82  TRNAKAMQALQPEIEALRKKYSSKDAQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPI 141

Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
               Y  I  + E+     + W  DL   DP                     I P++  L
Sbjct: 142 LIGFYHAIMRTREIAQ-HNFLWF-DLGDKDPYY-------------------ILPLVAGL 180

Query: 500 SMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           + FIQ K+        +   AM+L  MP++ V    +FPA L +YW   N+ SIVQ  +I
Sbjct: 181 TTFIQQKIMMAGSAQQNPQMAMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIVQTYLI 240


>gi|225867467|ref|YP_002752845.1| stage III sporulation protein J [Bacillus cereus 03BB102]
 gi|225786803|gb|ACO27020.1| stage III sporulation protein J [Bacillus cereus 03BB102]
          Length = 255

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     ++  P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 17  ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 77  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 175

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM+L  MP++ +    +FPA L +YW   N+  I 
Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235

Query: 552 QQAVI 556
           Q  +I
Sbjct: 236 QMYLI 240


>gi|328958800|ref|YP_004376186.1| OxaA-like protein precursor [Carnobacterium sp. 17-4]
 gi|328675124|gb|AEB31170.1| OxaA-like protein precursor [Carnobacterium sp. 17-4]
          Length = 267

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 115/260 (44%), Gaps = 27/260 (10%)

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           P  E        Y I     +++       G++G+ I++ T+ ++L+  P+   Q  ST 
Sbjct: 18  PITEQSTGIWDKYVIFNFSRVIIWLSNLFGGSYGVGIIVFTLIIRLILLPVMHGQTKSTR 77

Query: 388 NMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
            M  +QP++ EL+ K+          L++   +LY    +NP+AGC P+L+Q+PV  A+Y
Sbjct: 78  KMSELQPQLKELQTKYASKDTDTQSKLKEETSKLYSEAGVNPVAGCLPLLIQMPVLIAMY 137

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           + IS + E+     + W+ +L A DP                     I PI+ ++  F  
Sbjct: 138 QAISRT-EVLKTGNFLWM-NLGAPDPYF-------------------ILPILAAILTFAT 176

Query: 505 MK---MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            K   MS   A+     +L  MP + +F   + P+ L +YW   N  S+ Q  ++     
Sbjct: 177 TKLSTMSQAEANPTTTTMLYVMPALILFMGITLPSALSLYWVVGNAFSVAQTLLLNNPFK 236

Query: 562 AEIGLIDRLRSTFSKNYNSQ 581
            +    +++++   +    +
Sbjct: 237 IKKERDEKIKTERDRQRALE 256


>gi|313679788|ref|YP_004057527.1| membrane protein insertase, yidc/oxa1 family [Oceanithermus
           profundus DSM 14977]
 gi|313152503|gb|ADR36354.1| membrane protein insertase, YidC/Oxa1 family [Oceanithermus
           profundus DSM 14977]
          Length = 461

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 76/238 (31%), Positives = 122/238 (51%), Gaps = 26/238 (10%)

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
                  L     +  ++  +  +M   Y    N+G+AI+L TVFV+LL +PL  +Q+ S
Sbjct: 243 GFYELPGLFKPNIWGQLSLGLLYVMELAYKYTTNWGLAILLLTVFVRLLLWPLMHQQFKS 302

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
            A M  I+P +DE+ +K+K  P +   +A++ LY+ H INP AGC P+ +Q+P+ F +++
Sbjct: 303 MAEMNKIKPLMDEINKKYKDDPEKK-NEALMNLYREHKINPAAGCLPMFIQMPILFMMWR 361

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ- 504
           VI+   E      + WI DL+  DP                     + P +  L M  Q 
Sbjct: 362 VIAN-YEFDQ--GFLWIPDLSLPDPFY-------------------VLPALYVLVMLAQT 399

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           M MS    D  +  I+  M ++F+F +  FPAG+ +YW +S +I +VQQ +I K  G 
Sbjct: 400 MLMSHGNKDAMRQGIM--MNLIFIFLVLKFPAGVTLYWVFSTLIGLVQQWMINKQLGI 455


>gi|229094597|ref|ZP_04225664.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-42]
 gi|228688844|gb|EEL42675.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-42]
          Length = 246

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     ++  P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 8   ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 67

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 68  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 128 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 166

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM+L  MP++ +    +FPA L +YW   N+  I 
Sbjct: 167 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 226

Query: 552 QQAVI 556
           Q  +I
Sbjct: 227 QMYLI 231


>gi|229106081|ref|ZP_04236693.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-28]
 gi|228677336|gb|EEL31601.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-28]
          Length = 246

 Score =  142 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     +   P           YF+     ++  +   L  N+G+AI++TT+ ++    P
Sbjct: 8   IATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFATWLGDNYGLAIVITTLIIRFALLP 67

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 68  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 128 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 166

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM++  MP++ +    +FPA L +YW   N+  I 
Sbjct: 167 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 226

Query: 552 QQAVI 556
           Q   I
Sbjct: 227 QMYFI 231


>gi|326489461|dbj|BAK01711.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 512

 Score =  142 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 18/235 (7%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++   +G AI+L TV +K   FPL KKQ  S   M+++QP++  ++E+      + +Q  
Sbjct: 122 HVPYPYGFAIILLTVLIKGATFPLTKKQVESALAMRSLQPQVKAIQERHAG-DQERIQLE 180

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470
              LYK   ++PLAGC P L+ IPV+  +YK +S  + E      + WI  LA       
Sbjct: 181 TAHLYKLSGVDPLAGCLPTLVTIPVWIGLYKALSNVANEGLLTEGFFWIPSLAGPTTIAA 240

Query: 471 -------TNIFTL-FGILPFYLPGFMHVGIWPIIMSLSMFI--QMKMSPPPADKGQA--- 517
                  + IF    G  P   P  +   + P+++ +S ++  Q+  S    D  Q    
Sbjct: 241 RESGQGISWIFPFTDGHPPLGWPDTLAYLVLPVLLVISQYVSAQIMQSSQSNDPSQQGAQ 300

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
             + ++P++  +   S P+GL +YW  +NV+S  QQ  + K+ GA+  + + +  
Sbjct: 301 AAVKFLPLLIGYFALSVPSGLSLYWLTNNVLSSAQQVWLQKLGGAKNPVQEYIDK 355


>gi|326943284|gb|AEA19180.1| OxaA-like protein precursor [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 255

 Score =  142 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 27/258 (10%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
              L A       I     +   P           YF+     ++  +   L  N+G+AI
Sbjct: 4   KIGLLAMVITLMAIATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFATWLGDNYGLAI 63

Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421
           ++TT+ ++    PL  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ 
Sbjct: 64  VITTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           + +NPLAGC PI +Q+P+ FA Y  I  + E+     + W  DL  ADP           
Sbjct: 124 NGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY--------- 172

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538
                     I P++ +++ FIQ K++       +   AM++  MP++ +    +FPA L
Sbjct: 173 ----------ILPVVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAAL 222

Query: 539 IIYWSWSNVISIVQQAVI 556
            +YW   N+  I Q   I
Sbjct: 223 SLYWVVGNIFGIAQMYFI 240


>gi|229035144|ref|ZP_04189090.1| Membrane protein oxaA 1 [Bacillus cereus AH1271]
 gi|228728210|gb|EEL79240.1| Membrane protein oxaA 1 [Bacillus cereus AH1271]
          Length = 255

 Score =  142 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 72/258 (27%), Positives = 120/258 (46%), Gaps = 27/258 (10%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
              L A       I     ++  P           YF+     ++  +      N+G+AI
Sbjct: 4   KIGLLAMVIALMAIATGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAI 63

Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421
           ++TT+ ++    PL  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ 
Sbjct: 64  VVTTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           + +NPLAGC PI +Q+P+ FA Y  I  + E+     + W  DL  ADP           
Sbjct: 124 NGVNPLAGCLPIFVQMPILFAFYHAIMRTAEI-SKHTFLWF-DLGQADPYY--------- 172

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538
                     I P++ +++ FIQ K++       +   AM++  MP++ +    +FPA L
Sbjct: 173 ----------ILPVVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAAL 222

Query: 539 IIYWSWSNVISIVQQAVI 556
            +YW   N+  I Q  +I
Sbjct: 223 SLYWVVGNIFGIAQMYLI 240


>gi|205371916|ref|ZP_03224736.1| OxaA-like protein precursor [Bacillus coahuilensis m4-4]
          Length = 257

 Score =  142 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 28/265 (10%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +     ++  P           YF+    ++++++     G++G++I+  T+ ++L+  
Sbjct: 16  LLLSGCTEINQPITAESEGIWNKYFVFPLSWLIITFADLFGGSYGLSIITVTILIRLVIL 75

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPI 433
           PL  KQ  ++  M+ + P+I  L+EK+        Q LQ+  + L++ H +NPLAGC+P+
Sbjct: 76  PLVIKQTQNSKAMQKLSPEIQSLKEKYSSKDAQTQQKLQQETMALFQKHGVNPLAGCFPL 135

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           ++Q+P+    Y  I  +  ++    + W  DL  ADP                     I 
Sbjct: 136 IVQMPILIGFYHAIVRTDAIKEDS-FLWF-DLGVADPYF-------------------IL 174

Query: 494 PIIMSLSMFIQMKMSPP--PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           P++   + F+Q K+     P      M+L  MP++ V    SFPA L +YW   N+  I+
Sbjct: 175 PLVAGATTFLQQKIMMQGVPQQPQMQMMLYLMPIMIVIFAISFPAALSLYWVVGNIFMII 234

Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSK 576
               I         ++        K
Sbjct: 235 STYFI--KAPDRKEVVAAEAGGKKK 257


>gi|228988715|ref|ZP_04148800.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228771027|gb|EEM19508.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 255

 Score =  142 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     ++  P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 17  ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 77  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 175

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM++  MP++ +    +FPA L +YW   N+  I 
Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235

Query: 552 QQAVI 556
           Q  +I
Sbjct: 236 QMYLI 240


>gi|311897303|dbj|BAJ29711.1| putative OxaA family protein [Kitasatospora setae KM-6054]
          Length = 397

 Score =  142 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 20/234 (8%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +G++I++  V +++   PL  KQ  +T  M+ IQPK+  ++E++K    Q   + M++LY
Sbjct: 36  WGLSIVMMVVVIRICLIPLFVKQIKATRAMQAIQPKMKAIQERYKNDK-QRQSEEMMKLY 94

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD--LAAADPTNIFTLF 477
           K    NP + C PIL+Q P F A+Y V++    + +    G I    L +A   +IF   
Sbjct: 95  KEAGTNPFSSCLPILVQAPFFTALYGVLAS---IANDKTIGVIDQPLLESAKQAHIFGAP 151

Query: 478 GILPFYLPGFMHVGI----WPIIMSLSMFIQMKMSPP---------PADKGQAMILNWMP 524
               F     + + I      ++MSLS F+  +             P  + Q M++   P
Sbjct: 152 LSAKFVGAETVQIQIVCAVMIVLMSLSQFVTQRQLMTKNVDLSVKTPFMQQQKMLMYVFP 211

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-IGLIDRLRSTFSKN 577
           ++F     +FP G+++YW  +NV S+ QQ V+++ +        D  ++   K 
Sbjct: 212 IMFAVMGINFPVGVLVYWLTTNVWSMAQQLVVIRNNPTPGSRAWDERQARLKKA 265


>gi|229015403|ref|ZP_04172409.1| Membrane protein oxaA 1 [Bacillus cereus AH1273]
 gi|229026927|ref|ZP_04183250.1| Membrane protein oxaA 1 [Bacillus cereus AH1272]
 gi|228734385|gb|EEL85056.1| Membrane protein oxaA 1 [Bacillus cereus AH1272]
 gi|228745882|gb|EEL95878.1| Membrane protein oxaA 1 [Bacillus cereus AH1273]
          Length = 255

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 27/258 (10%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
              L A       I     +   P           YF+     ++  +      N+G+AI
Sbjct: 4   KIGLIAMVVVLMAIATGCSETNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAI 63

Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421
           ++TT+ ++    PL  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ 
Sbjct: 64  VVTTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           + +NPLAGC PI +Q+P+ FA Y  I  + E+     + W  DL  ADP           
Sbjct: 124 NGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY--------- 172

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538
                     I PI+ +++ FIQ K++       +   AM++  MP++ +    +FPA L
Sbjct: 173 ----------ILPIVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAAL 222

Query: 539 IIYWSWSNVISIVQQAVI 556
            +YW   N+  I Q  +I
Sbjct: 223 SLYWVVGNIFGIAQMYLI 240


>gi|313621678|gb|EFR92461.1| stage III sporulation protein J [Listeria innocua FSL S4-378]
          Length = 287

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 116/232 (50%), Gaps = 27/232 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    +++  +     GN+ + I++ T+ ++LL  PL  KQ  S   M ++QPKI EL
Sbjct: 45  YIVFPLSWVITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKEL 104

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +EK+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L   DP                     I PI+ +L+ F+  K+S       +
Sbjct: 165 S-FLWMQ-LGNPDPYY-------------------ILPIVAALTTFLSSKISMMGQTQQN 203

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I      +  
Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 255


>gi|229176162|ref|ZP_04303654.1| Membrane protein oxaA 1 [Bacillus cereus MM3]
 gi|228607321|gb|EEK64651.1| Membrane protein oxaA 1 [Bacillus cereus MM3]
          Length = 246

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 27/223 (12%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           YF+     ++  +      N+G+AI++TT+ ++    PL  KQ  ST  M+ +QP++ +L
Sbjct: 30  YFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEMVKL 89

Query: 400 REKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +EK+        Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y  I  + E+   
Sbjct: 90  KEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTAEI-SK 148

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---D 513
             + W  DL  ADP                     I P++ +++ FIQ K++       +
Sbjct: 149 HTFLWF-DLGQADPYY-------------------ILPVVAAITTFIQQKLAMAGTAGQN 188

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
              AM++  MP++ +    +FPA L +YW   N+  I Q  +I
Sbjct: 189 PQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIAQMYLI 231


>gi|16802044|ref|NP_472312.1| hypothetical protein lin2986 [Listeria innocua Clip11262]
 gi|38503122|sp|Q926Q5|OXAA1_LISIN RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|16415526|emb|CAC98211.1| lin2986 [Listeria innocua Clip11262]
          Length = 287

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 31/251 (12%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    +++  +     GN+ + I++ T+ ++LL  PL  KQ  S   M ++QPKI EL
Sbjct: 45  YIVFPLSWVITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKEL 104

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +EK+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIK-T 163

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L   DP                     I PI+ +L+ F+  K+S       +
Sbjct: 164 DTFLWMQ-LGNPDPYY-------------------ILPIVAALTTFLSSKISMMGQTQQN 203

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG----LIDR 569
           K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I      +         +
Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263

Query: 570 LRSTFSKNYNS 580
           L     K   +
Sbjct: 264 LEEERLKKKAA 274


>gi|295707340|ref|YP_003600415.1| membrane protein OxaA [Bacillus megaterium DSM 319]
 gi|294804999|gb|ADF42065.1| membrane protein OxaA [Bacillus megaterium DSM 319]
          Length = 254

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 68/225 (30%), Positives = 119/225 (52%), Gaps = 27/225 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W  ++  P+ ++++Y   +  ++G+AI++ T+ ++LL  PL  KQ  +T  M+ +QP++ 
Sbjct: 36  WNEYVVYPLSLVITYLAEVFKSYGVAIIVVTILIRLLILPLMIKQMRNTKAMQTLQPEMQ 95

Query: 398 ELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           +L+EK+     Q  Q+     + L++T+ +NPLAGC+PIL+Q+P+   I+  I+ + E+ 
Sbjct: 96  KLKEKYSSKDAQTQQQLQKETMALFQTYGVNPLAGCFPILIQMPILIGIFHAITRTSEIA 155

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---P 511
           +   + W  DL A DP                     I PI+  ++ FIQ KM       
Sbjct: 156 NNS-FLWF-DLGARDPLF-------------------ILPIVAGITTFIQQKMMMAGNAN 194

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            +   AM+L  MP++ V    +FPA L +YW   N+  I+Q   I
Sbjct: 195 QNPQMAMMLWVMPIMIVVFAINFPAALSLYWVVGNLFMIIQTYFI 239


>gi|301056960|ref|YP_003795171.1| stage III sporulation protein J [Bacillus anthracis CI]
 gi|300379129|gb|ADK08033.1| stage III sporulation protein J [Bacillus cereus biovar anthracis
           str. CI]
          Length = 255

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     ++  P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 17  ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 77  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 175

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
            + +++ FIQ K++       +   AM+L  MP++ +    +FPA L +YW   N+  I 
Sbjct: 176 AVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235

Query: 552 QQAVI 556
           Q  +I
Sbjct: 236 QMYLI 240


>gi|152977685|ref|YP_001377202.1| OxaA-like protein precursor [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152026437|gb|ABS24207.1| 60 kDa inner membrane insertion protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 255

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 27/258 (10%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
              L A       I     ++  P           YF+     ++  +      N+G+AI
Sbjct: 4   KIGLLAMVIALMAIAAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAI 63

Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421
           ++TT+ ++    PL  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ 
Sbjct: 64  VITTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           H +NPLAGC PI +Q+P+ FA Y  I  + E++    + W  DL  ADP           
Sbjct: 124 HGVNPLAGCLPIFIQMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPYY--------- 172

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538
                     I PI+ +++ FIQ K++       +   AM++  MP++ +    +FPA L
Sbjct: 173 ----------ILPIVAAITTFIQQKIAMTGTVGQNPQMAMMVWLMPIMILIFAINFPAAL 222

Query: 539 IIYWSWSNVISIVQQAVI 556
            +YW   N+  I Q  +I
Sbjct: 223 SLYWVVGNIFGIAQMYMI 240


>gi|294501989|ref|YP_003565689.1| membrane protein OxaA [Bacillus megaterium QM B1551]
 gi|294351926|gb|ADE72255.1| membrane protein OxaA [Bacillus megaterium QM B1551]
          Length = 254

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 67/225 (29%), Positives = 119/225 (52%), Gaps = 27/225 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W  ++  P+ ++++Y   +  ++G+AI++ T+ ++LL  PL  KQ  +T  M+ +QP++ 
Sbjct: 36  WNEYVVYPLSLVITYLAEVFKSYGVAIIVVTILIRLLILPLMIKQMRNTKAMQTLQPEMQ 95

Query: 398 ELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           +L+EK+     Q  Q+     + L++T+ +NPLAGC+PIL+Q+P+   I+  I+ + E+ 
Sbjct: 96  KLKEKYSSKDAQTQQQLQKETMALFQTYGVNPLAGCFPILIQMPILIGIFHAITRTSEIA 155

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---P 511
           +   + W  DL A DP                     I P++  ++ FIQ KM       
Sbjct: 156 NNS-FLWF-DLGARDPLF-------------------ILPVVAGITTFIQQKMMMAGNAN 194

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            +   AM+L  MP++ V    +FPA L +YW   N+  I+Q   I
Sbjct: 195 QNPQMAMMLWVMPIMIVVFAINFPAALSLYWVVGNLFMIIQTYFI 239


>gi|256826456|ref|YP_003150416.1| preprotein translocase subunit YidC [Kytococcus sedentarius DSM
           20547]
 gi|256689849|gb|ACV07651.1| preprotein translocase subunit YidC [Kytococcus sedentarius DSM
           20547]
          Length = 350

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 327 IPRFEMLIDWGWFYFIA--KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384
           +P     I+W     +A        +         + ++I+   + V+LL  PL  KQ  
Sbjct: 1   MPNLLYPIEWAVAAILAGAHWGVTALGLPEESGWTWVLSILALVILVRLLMIPLVVKQIH 60

Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVF 440
           S+  M+ + P++ +++ K+K    Q   +      ++LYK +  NP A C PIL+QIP+ 
Sbjct: 61  SSRKMQLLAPELKKIQAKYKGKKDQASMQRQQAETMELYKNNGTNPFASCLPILVQIPIL 120

Query: 441 FAIYKVISISLEMR---HAPFWGWIKDL-AAADPTNIFTLFGILPF----YLPGFMHVGI 492
           F +++V++   E+      P     +DL ++ D   IF       F     L G +   +
Sbjct: 121 FGLFRVLNGVDEIAAGTKDPIGFMTRDLASSFDAATIFGAELSDSFLHDSDLTGKIVSVV 180

Query: 493 WPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
             ++M++  F+ MKM             P  + Q ++L  +PV+      +FP G+++YW
Sbjct: 181 LILLMTVFTFVSMKMMMDKNMPDSAKEGPMAQSQTIMLYALPVILAVTGVNFPIGVLVYW 240

Query: 543 SWSNVISIVQQAVIMKMHGAE 563
           +++N+ S  QQ  +++     
Sbjct: 241 TFTNLWSYFQQLYVIRNLPTP 261


>gi|297565963|ref|YP_003684935.1| membrane protein insertase, YidC/Oxa1 family [Meiothermus silvanus
           DSM 9946]
 gi|296850412|gb|ADH63427.1| membrane protein insertase, YidC/Oxa1 family [Meiothermus silvanus
           DSM 9946]
          Length = 454

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 66/228 (28%), Positives = 117/228 (51%), Gaps = 24/228 (10%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
             +  ++  +  +M   +   G++ +AI+  T+ V+LL +PL  +QY S A ++ IQP I
Sbjct: 247 DIWGRLSLGLLWVMETGHRYTGSWFLAIVFLTILVRLLLWPLMHQQYKSMAEIQRIQPLI 306

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +E+ +K+K +  +   +A ++LY+ H +NP AGC P+ LQ+P+ F ++KVIS   E    
Sbjct: 307 EEINKKYKDNQEKR-TEATMKLYQEHKVNPAAGCLPLFLQMPILFVLWKVISN-YEFSQ- 363

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
             + W+ DLA  DP                     I P++   SM     +S    ++  
Sbjct: 364 -GFLWLPDLALPDPYY-------------------ILPVLYVASMIASTWLS-AHGNQSA 402

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
                ++ ++F+F +  FP+G+ IYW  S +IS+ QQ +I +   A  
Sbjct: 403 IRQGIFINLIFIFLVLQFPSGVTIYWILSTLISLGQQVLINRSLAARP 450


>gi|239918804|ref|YP_002958362.1| preprotein translocase subunit YidC [Micrococcus luteus NCTC 2665]
 gi|281414969|ref|ZP_06246711.1| preprotein translocase subunit YidC [Micrococcus luteus NCTC 2665]
 gi|239840011|gb|ACS31808.1| preprotein translocase subunit YidC [Micrococcus luteus NCTC 2665]
          Length = 332

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 38/269 (14%)

Query: 336 WGWFYFIAKPMFMLMSYFYNL-------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              F ++   +                    + ++I+L  V ++ L  PL  KQ  +   
Sbjct: 6   LSPFRWLMSWLLGAFHSILEFAGLPADSGWTWALSILLLVVLIRTLLIPLFVKQIKAQRA 65

Query: 389 MKNIQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
           M+ IQP++ +L+ K+K    Q+ ++        L K H  NP A C P+L+Q+P FFA+Y
Sbjct: 66  MQAIQPELQKLQAKYKGKKDQLSRQAMAMEQQALMKEHKANPFAACLPLLIQMPFFFALY 125

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIF---TLFGI-----------LPFYLPGFMHV 490
           +V+  +   R A   G   D  +AD    F   T+FG             P   P  +  
Sbjct: 126 QVLIGA---RGAAERGEAMDALSADQIRSFEGSTIFGARMSDTFMNSLGAPGSGPVIVTA 182

Query: 491 GIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLII 540
            +  ++MS SMF   KM             P  + Q ++L  MP++F     +FP G+++
Sbjct: 183 IVLILLMSGSMFFMQKMLMTKNMTQQALSGPMMQTQQIMLYAMPLIFGIGGINFPIGVLL 242

Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           YW++SN  ++ QQ  I++ +     L ++
Sbjct: 243 YWTYSNFWAVGQQWWIIRNNPTPGSLAEK 271


>gi|255016877|ref|ZP_05289003.1| SpoIIIJ protein [Listeria monocytogenes FSL F2-515]
          Length = 297

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 27/232 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    + +  +     G++ + I++ T+ ++LL  PL  KQ  S   M N+QPKI EL
Sbjct: 45  YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 104

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +EK+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L   DP                     I P++ +L+ F+  K+S       +
Sbjct: 165 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 203

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I      +  
Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 255


>gi|296134496|ref|YP_003641743.1| membrane protein insertase, YidC/Oxa1 family [Thermincola sp. JR]
 gi|296033074|gb|ADG83842.1| membrane protein insertase, YidC/Oxa1 family [Thermincola potens
           JR]
          Length = 228

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 26/226 (11%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           + N+G+AI+L TV +K+L  PL  KQ  S    + +QPK+ E++EK+K    +  Q+A++
Sbjct: 24  IPNYGLAIILITVLIKMLLLPLTIKQMKSLKMTQQLQPKVKEIQEKYKDP--KQAQQAIM 81

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAAADPTNIFT 475
           +LYK +  NPL+GC P+LLQ+P+  A+Y+ +        A   + WI +L+  D      
Sbjct: 82  ELYKQYGANPLSGCLPLLLQMPIIIALYRALMKFPYTNEAHAKFLWISNLSQHDKI---- 137

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
                           + PI+  L+ ++  +M+    D+ Q  +L  MP+   +   SFP
Sbjct: 138 ----------------VLPILAVLTTYLLQRMTTNMQDQTQKTMLIVMPLFIGWLSMSFP 181

Query: 536 AGLIIYWSWSNVISIVQQAVIMKM---HGAEIGLIDRLRSTFSKNY 578
           AGL +YW  +N++  +QQ  I KM      +            +  
Sbjct: 182 AGLALYWVVTNLVGAIQQYFINKMPLDIPVKEETGPNETGRKKRKN 227


>gi|228942635|ref|ZP_04105167.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975565|ref|ZP_04136117.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982201|ref|ZP_04142490.1| Membrane protein oxaA 1 [Bacillus thuringiensis Bt407]
 gi|228777553|gb|EEM25831.1| Membrane protein oxaA 1 [Bacillus thuringiensis Bt407]
 gi|228784175|gb|EEM32202.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817061|gb|EEM63154.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
          Length = 246

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     +   P           YF+     ++  +   L  N+G+AI++TT+ ++    P
Sbjct: 8   IATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFATWLGDNYGLAIVITTLIIRFALLP 67

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 68  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 128 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 166

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM++  MP++ +    +FPA L +YW   N+  I 
Sbjct: 167 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 226

Query: 552 QQAVI 556
           Q   I
Sbjct: 227 QMYFI 231


>gi|313625809|gb|EFR95423.1| stage III sporulation protein J [Listeria innocua FSL J1-023]
          Length = 287

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 65/251 (25%), Positives = 120/251 (47%), Gaps = 31/251 (12%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    +++  +     GN+ + I++ T+ ++LL  PL  KQ  S   M ++QPKI EL
Sbjct: 45  YIVFPLSWVITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKEL 104

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +EK+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIK-T 163

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L   DP                     I P++ +L+ F+  K+S       +
Sbjct: 164 DTFLWMQ-LGNPDPYF-------------------ILPVVAALTTFLSSKISMMGQTQQN 203

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG----LIDR 569
           K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I      +         +
Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263

Query: 570 LRSTFSKNYNS 580
           L     K   +
Sbjct: 264 LEEERLKKKAA 274


>gi|300118812|ref|ZP_07056532.1| OxaA-like protein precursor [Bacillus cereus SJ1]
 gi|298723780|gb|EFI64502.1| OxaA-like protein precursor [Bacillus cereus SJ1]
          Length = 255

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 27/258 (10%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
              L A       I     ++  P           YF+     ++  +      N+G+AI
Sbjct: 4   KIGLLAMVIALMAIATGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFNSNYGLAI 63

Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421
           ++TT+ ++    PL  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ 
Sbjct: 64  VVTTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           + +NPLAGC PI +Q+P+ FA Y  I  + E+     + W  DL  ADP           
Sbjct: 124 NGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY--------- 172

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538
                     I P++ +++ FIQ K++       +   AM+L  MP++ +    +FPA L
Sbjct: 173 ----------ILPVVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAAL 222

Query: 539 IIYWSWSNVISIVQQAVI 556
            +YW   N+  I Q  +I
Sbjct: 223 SLYWVVGNIFGIAQMYLI 240


>gi|206975771|ref|ZP_03236682.1| stage III sporulation protein J [Bacillus cereus H3081.97]
 gi|217962978|ref|YP_002341556.1| OxaA-like protein precursor [Bacillus cereus AH187]
 gi|229159046|ref|ZP_04287102.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 4342]
 gi|206745865|gb|EDZ57261.1| stage III sporulation protein J [Bacillus cereus H3081.97]
 gi|217067037|gb|ACJ81287.1| stage III sporulation protein J [Bacillus cereus AH187]
 gi|228624465|gb|EEK81236.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 4342]
 gi|324329437|gb|ADY24697.1| OxaA-like protein precursor [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 255

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     ++  P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 17  ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 77  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPLY-------------------ILP 175

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM++  MP++ +    +FPA L +YW   N+  I 
Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235

Query: 552 QQAVI 556
           Q  +I
Sbjct: 236 QMYLI 240


>gi|229164437|ref|ZP_04292365.1| Membrane protein oxaA 1 [Bacillus cereus R309803]
 gi|228619042|gb|EEK75940.1| Membrane protein oxaA 1 [Bacillus cereus R309803]
          Length = 246

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     +   P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 8   IATGCSETNQPITPKSTGIWNEYFVYPLSQLITYFADLFGNNYGLAIVVTTLIIRFALLP 67

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 68  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 128 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 166

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           I+ +++ FIQ K++       +   AM++  MP++ +    +FPA L +YW   N+  I 
Sbjct: 167 IVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIA 226

Query: 552 QQAVI 556
           Q  +I
Sbjct: 227 QMYLI 231


>gi|138897069|ref|YP_001127522.1| OxaA-like protein [Geobacillus thermodenitrificans NG80-2]
 gi|134268582|gb|ABO68777.1| Stage III sporulation [Geobacillus thermodenitrificans NG80-2]
          Length = 238

 Score =  141 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 69/240 (28%), Positives = 118/240 (49%), Gaps = 27/240 (11%)

Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382
            ++  P  +    +   Y +    +++      L G+FG++I++ T+ ++LL  PL  +Q
Sbjct: 6   TEINEPITQESKGFWNEYIVYPLSWLIKYVAELLGGSFGLSIIVVTILIRLLILPLMIQQ 65

Query: 383 YVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
             +   M+ +QP+I+ LR+K+        Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+
Sbjct: 66  TRNAKAMQALQPEIEALRKKYSSKDAQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPI 125

Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
               Y  I  + E+     + W  DL   DP                     I P++  L
Sbjct: 126 LIGFYHAIMRTREIAQ-HNFLWF-DLGDKDPYY-------------------ILPLVAGL 164

Query: 500 SMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           + FIQ K+        +   AM+L  MP++ V    +FPA L +YW   N+ SIVQ  +I
Sbjct: 165 TTFIQQKIMMAGSAQQNPQMAMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIVQTYLI 224


>gi|47568685|ref|ZP_00239382.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus
           G9241]
 gi|47554673|gb|EAL13027.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus
           G9241]
          Length = 246

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     ++  P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 8   ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 67

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 68  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 128 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 166

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM++  MP++ +    +FPA L +YW   N+  I 
Sbjct: 167 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 226

Query: 552 QQAVI 556
           Q  +I
Sbjct: 227 QMYLI 231


>gi|108805126|ref|YP_645063.1| 60 kDa inner membrane insertion protein [Rubrobacter xylanophilus
           DSM 9941]
 gi|108766369|gb|ABG05251.1| 60 kDa inner membrane insertion protein [Rubrobacter xylanophilus
           DSM 9941]
          Length = 246

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 22/226 (9%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
             F  +   +  ++  F+     + +AI + TV V+ + FPL  +Q  S   M+ ++P+I
Sbjct: 7   EIFDPLFSLLGGMLFTFHGWGAPWWLAIAMLTVVVRAVLFPLTFRQVKSMRRMQELKPEI 66

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--SISLEMR 454
           DE+R + K   PQ  Q+ M++LY   NINPL GC P L+Q+P+F  +Y  I     LE  
Sbjct: 67  DEIRRRHKD-DPQRQQQEMMKLYGERNINPLGGCLPALVQLPIFLVLYYTIKEFEHLESF 125

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
                 W  DL A DP                       P++  L++    +++    + 
Sbjct: 126 RTGGLLWFDDLTAYDPYF-------------------ALPVVYVLTLMAAQEITIRNTNP 166

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            Q  ++  +PVVF   L+ FPAGL +Y+  SN+IS++Q  +I ++H
Sbjct: 167 QQRQLMRALPVVFGVVLARFPAGLFVYYITSNLISVLQNLLIYRLH 212


>gi|295402125|ref|ZP_06812084.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312112754|ref|YP_003991070.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
           Y4.1MC1]
 gi|294975808|gb|EFG51427.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311217855|gb|ADP76459.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
           Y4.1MC1]
          Length = 256

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 27/240 (11%)

Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382
             +  P       +   Y +    +++        G++G++I++ T+F++LL  PL  +Q
Sbjct: 23  TQINEPITPESKGFWNEYIVYPLSWLIKYVAGVFGGSYGLSIIVVTIFIRLLILPLMIQQ 82

Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
             +   M+ +QP+I +LREK+     Q    LQ+ M+ L++ H +NP+AGC+PIL+Q+P+
Sbjct: 83  TKNAKAMQALQPEIQKLREKYSSKDMQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPI 142

Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
               Y  I  + E+     + W  DL   DP                     I PI+  +
Sbjct: 143 LIGFYHAIMRTKEIA-EHNFLWF-DLGEKDPFY-------------------ILPIVAGI 181

Query: 500 SMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           + FIQ K+        +    M+L  MP++ V    +FPA L +YW   N+ SI Q   I
Sbjct: 182 TTFIQQKIVMADTGQQNPQMVMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIAQTYFI 241


>gi|218900627|ref|YP_002449038.1| stage III sporulation protein J [Bacillus cereus G9842]
 gi|228911326|ref|ZP_04075130.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 200]
 gi|218544253|gb|ACK96647.1| stage III sporulation protein J [Bacillus cereus G9842]
 gi|228848344|gb|EEM93194.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 200]
          Length = 255

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     +   P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 17  IATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLP 76

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 77  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  +  +     + W  DL  ADP                     I P
Sbjct: 137 VQMPILFAFYHAIMRTTAI-SEHTFLWF-DLGQADPFY-------------------ILP 175

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM+L  MP++ +    +FPA L +YW   N+  I 
Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235

Query: 552 QQAVI 556
           Q   I
Sbjct: 236 QMYFI 240


>gi|229199690|ref|ZP_04326333.1| Membrane protein oxaA 1 [Bacillus cereus m1293]
 gi|228583785|gb|EEK41960.1| Membrane protein oxaA 1 [Bacillus cereus m1293]
          Length = 255

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     ++  P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 17  ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 77  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPFY-------------------ILP 175

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM++  MP++ +    +FPA L +YW   N+  I 
Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235

Query: 552 QQAVI 556
           Q  +I
Sbjct: 236 QMYLI 240


>gi|229822696|ref|YP_002884222.1| 60 kDa inner membrane insertion protein [Beutenbergia cavernae DSM
           12333]
 gi|229568609|gb|ACQ82460.1| 60 kDa inner membrane insertion protein [Beutenbergia cavernae DSM
           12333]
          Length = 382

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 21/208 (10%)

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            IQ    + + K   +  Q +Q+ M+ +Y+    NP A C PIL Q PVFFA+++V++  
Sbjct: 74  EIQKLQKKYKGKTDPASRQAMQQEMMAIYREAGTNPFASCLPILAQSPVFFALFRVLASL 133

Query: 451 LEM----RHAPFWGWIKD--LAAADPTNIFTLFGILPF----YLPGFMHVGIWPIIMSLS 500
             +       P  G +     A A+ +  F       F     +   +   +  ++MS +
Sbjct: 134 PALASGDYGRPSIGPLTQEIAAEAEQSTFFGAQLSQTFMSSDDVQVKIVTVVLIVLMSAT 193

Query: 501 MFIQMK----MSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
            F   +     + P      P  + Q M++  +P++F F   +FP G+++YWS SN+ ++
Sbjct: 194 TFFTQRQLTMKNMPQTALDNPMARQQRMLMYVLPLIFAFTGVNFPIGVLVYWSTSNLWTM 253

Query: 551 VQQAVIMKMHGAE-IGLIDRLRSTFSKN 577
            QQ  +++   A       +L+   ++ 
Sbjct: 254 GQQFYVIRRSPAPGSEAEAKLKERQARK 281


>gi|320532819|ref|ZP_08033596.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral
           taxon 171 str. F0337]
 gi|320134970|gb|EFW27141.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral
           taxon 171 str. F0337]
          Length = 397

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 33/272 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W         +L+ +       + ++I+  T+ V+LL  PL  KQ  ++  M+ +QP++ 
Sbjct: 14  WVMVTIHKALVLIGFPDGPGIAWVLSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPELQ 73

Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----I 449
            L+ K+K        Q + + M+ LY+ H  NP+A C PIL+Q+P+FFA+++V++    +
Sbjct: 74  ALQAKYKGKKDPESRQRMNEEMMALYRKHGTNPMASCLPILVQMPIFFALFRVLASLGAV 133

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-------YLPGFMHVGIWPIIMSLSMF 502
           +      P  G +    A +     ++FG                +      IIMS++ +
Sbjct: 134 ATGKYGRPSIGPLTQQLA-EQVQASSVFGASLSSSFLSSSDTQVKIVTVAMIIIMSVTQW 192

Query: 503 IQM-KMSPPPA--------DKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
             M ++S            +     Q M+L  MPV+F  +  +F  G+++YW  SN+ ++
Sbjct: 193 YTMAQLSMKNMSTESLNSDNPMIRSQRMMLYVMPVIFAVSGVNFQIGVLVYWVVSNLWTM 252

Query: 551 VQQAVIMKMHG-----AEIGLIDRLRSTFSKN 577
            QQ   ++        AE     R+ +  ++ 
Sbjct: 253 GQQFFTIRNMPAPGSEAEKKYRARINAKRARK 284


>gi|229087976|ref|ZP_04220081.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-44]
 gi|228695333|gb|EEL48213.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-44]
          Length = 246

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 27/240 (11%)

Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382
            +  +P           YF+     ++  +      N+G+AI++TT+ ++    PL  KQ
Sbjct: 13  SETNLPITSKSTGIWNEYFVYPLSQLITYFAKLFGSNYGLAIVVTTLIIRFALLPLMIKQ 72

Query: 383 YVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
             ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+
Sbjct: 73  TKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPI 132

Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
            FA Y  I  + E+     + W  DL  ADP                     I PI+ ++
Sbjct: 133 LFAFYHAIMRTEEI-SKHTFLWF-DLGQADPYY-------------------ILPIVAAI 171

Query: 500 SMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           + FIQ K++       +   AM++  MP++ +    +FPA L +YW   N+  I Q  +I
Sbjct: 172 TTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYMI 231


>gi|206970374|ref|ZP_03231327.1| stage III sporulation protein J [Bacillus cereus AH1134]
 gi|206734951|gb|EDZ52120.1| stage III sporulation protein J [Bacillus cereus AH1134]
          Length = 255

 Score =  140 bits (352), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     +   P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 17  IATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLP 76

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 77  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  +  +     + W  DL  ADP                     I P
Sbjct: 137 VQMPILFAFYHAIMRTTAI-SEHTFLWF-DLGQADPFY-------------------ILP 175

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM+L  MP++ +    +FPA L +YW   N+  I 
Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235

Query: 552 QQAVI 556
           Q   I
Sbjct: 236 QMYFI 240


>gi|289642462|ref|ZP_06474607.1| 60 kDa inner membrane insertion protein [Frankia symbiont of
           Datisca glomerata]
 gi|289507721|gb|EFD28675.1| 60 kDa inner membrane insertion protein [Frankia symbiont of
           Datisca glomerata]
          Length = 451

 Score =  140 bits (352), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 30/235 (12%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
              + ++++L  + V+++ FPL  KQ  +   M+ +QPKI E+R+K+     Q +   ++
Sbjct: 29  FFAWALSVVLLVICVRIMIFPLFVKQVKAQRTMQLMQPKIKEIRDKY-GHDRQQMNAKIM 87

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVI-----------------SISLEMRHAPFW 459
           +L K H  NPL GC PILLQIP+F A++ V                   + L  +     
Sbjct: 88  ELQKEHG-NPLLGCLPILLQIPLFIALFHVFSHLRPVDRPGGVLEWAPRVGLTAQQVQQI 146

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI----WPIIMSLSMFIQMKMSPP---PA 512
              K L  +  T+  +    L F      +V I      ++M  + F+  +       P 
Sbjct: 147 AEAKLLGVSLSTSFTSSSNFLEFVQANGTNVKIFAVTLIVLMGATTFLTQRQIMARTGPV 206

Query: 513 DKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           D  QA++   +    P++       FP  +++YW  +N+ S+ QQ  ++K     
Sbjct: 207 DPQQAIVQKVLLYGSPIMLAVFGFQFPIAVLLYWLTTNLWSMGQQFFVIKKMPPP 261


>gi|229142235|ref|ZP_04270759.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST26]
 gi|228641253|gb|EEK97560.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST26]
          Length = 246

 Score =  140 bits (352), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     ++  P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 8   ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 67

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 68  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 128 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPLY-------------------ILP 166

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM++  MP++ +    +FPA L +YW   N+  I 
Sbjct: 167 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 226

Query: 552 QQAVI 556
           Q  +I
Sbjct: 227 QMYLI 231


>gi|332672290|ref|YP_004455298.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas fimi
           ATCC 484]
 gi|332341328|gb|AEE47911.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas fimi
           ATCC 484]
          Length = 371

 Score =  140 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 59/250 (23%), Positives = 113/250 (45%), Gaps = 25/250 (10%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W       +F  +         + ++I+   V +++L  PL  KQ  ++  M+ + P++ 
Sbjct: 17  WIMVQFHALFTTLGLNPESGAAWALSIVGLVVVIRILLIPLFFKQIKASRGMQMLAPEMQ 76

Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
            +++K+K        + + +  ++LY+ H  NP A C PILLQ P+FFA+++V+    ++
Sbjct: 77  AIQKKYKGKTDPASREAMSRETMELYRKHGTNPFASCLPILLQSPIFFALFRVLYQLPQI 136

Query: 454 RHAPFWGWIKDLAAADPT-----NIFTLFGILPF-----YLPGFMHVGIWPIIMSLSMFI 503
             A     I  ++A          IF       F          +   +  I MS + F+
Sbjct: 137 A-AGDIKPIGPMSAELAAQAEAATIFGAPLSGTFMQAGDNWHIRVVTVVLIIAMSATTFL 195

Query: 504 QMK----MSPPP-----ADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
             +     + PP         Q  +L + +P+VF F+  +FP G++IYW+ +N+ S+ QQ
Sbjct: 196 TQRQLTMKNMPPAALQGPMAQQQKVLLYVLPLVFAFSGVNFPIGVLIYWTTTNLWSMGQQ 255

Query: 554 AVIMKMHGAE 563
              ++   A 
Sbjct: 256 FYTIRRMPAP 265


>gi|194016614|ref|ZP_03055228.1| membrane protein OxaA 1 [Bacillus pumilus ATCC 7061]
 gi|194012087|gb|EDW21655.1| membrane protein OxaA 1 [Bacillus pumilus ATCC 7061]
          Length = 259

 Score =  140 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 28/265 (10%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +      +  P       +   Y +     ++         N+G+AI++ T+ ++LL  
Sbjct: 17  VLLAGCTQINEPITSDSKGFWNSYIVYPLSQLITYMANLTGENYGVAIIIVTLLIRLLIL 76

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPI 433
           PL  KQ  ST  M+ +QP++ +LREK+     +  Q+     + L++ + +NPLAGC+PI
Sbjct: 77  PLMIKQLRSTKAMQALQPELKKLREKYSSKDQKTQQQLQQETMALFQKNGVNPLAGCFPI 136

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+P+    Y  I  + E++    + W  DL + DP                     + 
Sbjct: 137 LIQMPILIGFYHAIMRTAEIK-KHTFLWF-DLGSPDPLF-------------------LL 175

Query: 494 PIIMSLSMFIQMKMSPP--PADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISI 550
           PII  ++ FIQ K+     P+D  Q  I+ W MP++ +    SFPA L +YW   N+  I
Sbjct: 176 PIIAGVATFIQQKLMMAGNPSDNPQMAIMLWVMPIMIIVFAISFPAALSLYWVVGNIFMI 235

Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFS 575
           +Q  VI K    ++   ++      
Sbjct: 236 IQTLVI-KTPQVKLDTKEKAGGNKK 259


>gi|222098963|ref|YP_002533021.1| oxaa-like protein precursor [Bacillus cereus Q1]
 gi|221243022|gb|ACM15732.1| stage III sporulation protein J [Bacillus cereus Q1]
          Length = 246

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     ++  P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 8   ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 67

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 68  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 128 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPFY-------------------ILP 166

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM++  MP++ +    +FPA L +YW   N+  I 
Sbjct: 167 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 226

Query: 552 QQAVI 556
           Q  +I
Sbjct: 227 QMYLI 231


>gi|157694477|ref|YP_001488939.1| OxaA-like protein precursor [Bacillus pumilus SAFR-032]
 gi|157683235|gb|ABV64379.1| stage III sporulation protein J [Bacillus pumilus SAFR-032]
          Length = 263

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 28/265 (10%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +      +  P       +   Y +     ++         N+G+AI++ T+ ++LL  
Sbjct: 21  VLLAGCTQINEPITSDSKGFWNSYIVYPLSQLITYMANLTGENYGVAIIIVTLLIRLLIL 80

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPI 433
           PL  KQ  ST  M+ +QP++ +LREK+     +  Q+     + L++ + +NPLAGC+PI
Sbjct: 81  PLMIKQLRSTKAMQALQPELKKLREKYSSKDQKTQQQLQQETMALFQKNGVNPLAGCFPI 140

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+P+    Y  I  + E++    + W  DL + DP                     + 
Sbjct: 141 LIQMPILIGFYHAIMRTAEIK-KHTFLWF-DLGSPDPLF-------------------LL 179

Query: 494 PIIMSLSMFIQMKMSPP--PADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISI 550
           PII  ++ FIQ K+     P+D  Q  I+ W MP++ +    SFPA L +YW   N+  I
Sbjct: 180 PIIAGVATFIQQKLMMAGNPSDNPQMAIMLWVMPIMIIVFAISFPAALSLYWVVGNIFMI 239

Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFS 575
           +Q  VI K    ++   ++      
Sbjct: 240 IQTLVI-KTPQVKLDTKEKAGGNKK 263


>gi|116874193|ref|YP_850974.1| SpoJ protein [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|116743071|emb|CAK22195.1| SpoJ protein [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 287

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 31/251 (12%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    +++  +     GN+ + I++ T+ ++LL  PL  KQ  S   M ++QPKI EL
Sbjct: 45  YIVFPLSWLITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKEL 104

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           + K+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 105 QVKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIK-T 163

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L   DP                     I PI+ +L+ F+  K+S       +
Sbjct: 164 DTFLWMQ-LGNPDPYY-------------------ILPIVAALTTFLSSKISMMGQTQQN 203

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG----LIDR 569
           K  AMI+  MPV+ +F   + P+ L +YW   NV ++ Q  +I      +         +
Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNVFTVFQTLLINNPFKNKREQEALAAAQ 263

Query: 570 LRSTFSKNYNS 580
           L     K   +
Sbjct: 264 LEEERLKKKAA 274


>gi|89101258|ref|ZP_01174079.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911]
 gi|89084023|gb|EAR63203.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911]
          Length = 244

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           +     ++  P       +   Y +      ++     L G++G+AI++ T+ ++LL  P
Sbjct: 3   LLTGCTEVNKPITSESEGFWNEYIVYPLSMFIVKVAETLGGSYGLAIIVVTLIIRLLILP 62

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  S+  M+ +QP++ +LREK+        Q LQ+  + L++ H +NPLAGC+P++
Sbjct: 63  LMIKQTKSSKAMQALQPEMQKLREKYSSKDQKTQQKLQQETMALFQQHGVNPLAGCFPLI 122

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+    Y  IS + E+ +   + W  DL + DP                   + + P
Sbjct: 123 VQMPILIGFYHAISRTREIAN-HDFLWF-DLGSPDP-------------------IYLLP 161

Query: 495 IIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           +I   + FIQ K+        +   AM+L  MPV+ +    +FPA L +YW   N+  IV
Sbjct: 162 LIAGATTFIQQKIMMAGTANQNPQMAMMLWIMPVMIIVFAINFPAALSLYWVVGNIFMIV 221

Query: 552 QQAVI 556
           Q   I
Sbjct: 222 QTYFI 226


>gi|255659825|ref|ZP_05405234.1| stage III sporulation protein J [Mitsuokella multacida DSM 20544]
 gi|260847900|gb|EEX67907.1| stage III sporulation protein J [Mitsuokella multacida DSM 20544]
          Length = 222

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/210 (27%), Positives = 114/210 (54%), Gaps = 21/210 (10%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           +G++G+AI+L T+ +K++ +PL  KQ  S   M+ + PK+ +++EK+K +P QV+Q+ + 
Sbjct: 31  IGSYGVAIILLTILIKMMLYPLTVKQVKSMKAMQELSPKMKKIQEKYKDNP-QVMQQKVG 89

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFT 475
            LYK   +NPLAGC P+L+Q+P+   +Y  +   +     +  + W+ +++  DP     
Sbjct: 90  ALYKEAGVNPLAGCLPLLIQMPILMGMYYALYNFTYPTPESAAFLWLPNMSDPDPYY--- 146

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
                           I P++ +L+ F+Q K +    ++   +++  MP+   +   +FP
Sbjct: 147 ----------------ILPVLSALTTFLQQKQTTTEMNQQMKIMMTVMPLFIGWISLNFP 190

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           +GL++YW   N++ I QQ  + +    +  
Sbjct: 191 SGLVLYWVTMNIVQITQQWWMYRHDDKKKE 220


>gi|228905430|ref|ZP_04069385.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 4222]
 gi|228968638|ref|ZP_04129621.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228791067|gb|EEM38685.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228854250|gb|EEM98953.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 4222]
          Length = 246

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     +   P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 8   IATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLP 67

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 68  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  +  +     + W  DL  ADP                     I P
Sbjct: 128 VQMPILFAFYHAIMRTTAI-SEHTFLWF-DLGQADPFY-------------------ILP 166

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM+L  MP++ +    +FPA L +YW   N+  I 
Sbjct: 167 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 226

Query: 552 QQAVI 556
           Q   I
Sbjct: 227 QMYFI 231


>gi|320531077|ref|ZP_08032106.1| putative OxaA-like protein [Selenomonas artemidis F0399]
 gi|320136659|gb|EFW28612.1| putative OxaA-like protein [Selenomonas artemidis F0399]
          Length = 225

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 21/186 (11%)

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433
           + +PL  KQ  S   M+ IQPK+ +++EK+K   P++LQ+   +L++   +NPLAGC P+
Sbjct: 49  VTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKN-DPRMLQQKTGELFRQAGVNPLAGCLPL 107

Query: 434 LLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           L+Q+P+   +Y  +   +     A  + WI  L+A DP                     I
Sbjct: 108 LVQMPILMGMYYALFNFAYPSEAAEAFLWIPHLSAPDPLY-------------------I 148

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            P++ +L+ F+Q KM+    +    +++  MP+   +   +FPAGL++YW   N++ I Q
Sbjct: 149 LPVLSALTTFLQQKMTSTEMNPQMKIMMTVMPLFIGWISLNFPAGLVLYWVTMNIVQIAQ 208

Query: 553 QAVIMK 558
           Q  + +
Sbjct: 209 QWWMYR 214


>gi|313894712|ref|ZP_07828273.1| stage III sporulation protein J [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312976621|gb|EFR42075.1| stage III sporulation protein J [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 225

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 21/186 (11%)

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433
           + +PL  KQ  S   M+ IQPK+ +++EK+K   P++LQ+   +L++   +NPLAGC P+
Sbjct: 49  VTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKN-DPRMLQQKTGELFRQAGVNPLAGCLPL 107

Query: 434 LLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           L+Q+P+   +Y  +   +     A  + WI  L+A DP                     I
Sbjct: 108 LVQMPILMGMYYALFNFAYPSEAAEAFLWIPHLSAPDPLY-------------------I 148

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            P++ +L+ F+Q KM+    +    +++  MP+   +   +FPAGL++YW   N++ I Q
Sbjct: 149 LPVLSALTTFLQQKMTSTEMNPQMKIMMTVMPLFIGWISLNFPAGLVLYWVTMNIVQIAQ 208

Query: 553 QAVIMK 558
           Q  + +
Sbjct: 209 QWWMYR 214


>gi|145344819|ref|XP_001416922.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like
           protein [Ostreococcus lucimarinus CCE9901]
 gi|144577148|gb|ABO95215.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like
           protein [Ostreococcus lucimarinus CCE9901]
          Length = 271

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 19/226 (8%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            ++G +I++ TV VKL  FPL+KKQ  S+  M+ +QP+I EL+  +    P+ LQ    +
Sbjct: 38  YSYGFSIIVLTVLVKLATFPLSKKQVESSMQMQAMQPRIKELQAMYAN-DPERLQMEQAR 96

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLAAADPTNIFT- 475
           LYK    NPLAGC P+   +PVF  +Y+ +S +  E      + WI  L           
Sbjct: 97  LYKEAGFNPLAGCLPVFATLPVFIGLYRALSNAASEGLLTDGFYWIPSLGGPTSIASRNA 156

Query: 476 ----------LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAM---I 519
                     + G  P          + P+++  S ++  ++    P   D  Q     I
Sbjct: 157 GSGFAWLWPFVDGHPPLGWHDTTAYLVLPVLLVASQYVSQQIVSPQPKTDDPAQQQSQAI 216

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           L ++P++  F   + PAGL +YW  +N+I+  Q  ++ K   A   
Sbjct: 217 LKFLPLMIGFFSLNVPAGLTLYWFANNIITTAQTLILRKTTTAPEP 262


>gi|296330034|ref|ZP_06872518.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305676758|ref|YP_003868430.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ
           family) [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296153073|gb|EFG93938.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305415002|gb|ADM40121.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ
           family) [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 259

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 27/246 (10%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +      +  P       +   Y +     ++         N+G++I+L T+ ++LL  
Sbjct: 16  MLLAGCSSVKEPITADSPHFWDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLIL 75

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433
           PL  KQ  S+  M+ +QP++ +L+EK+        Q LQ+  + L++ H +NPLAGC+PI
Sbjct: 76  PLMIKQLRSSKAMQALQPEMQKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPI 135

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+P+    Y  I  +  +     + W  DL   DP                     I 
Sbjct: 136 LIQMPILIGFYHAIMRTQAI-SEHSFLWF-DLGEKDPYY-------------------IL 174

Query: 494 PIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           PI+  ++ F+Q K+        +   AM+L  MP++ +    +FPA L +YW   N+  I
Sbjct: 175 PIVAGVATFVQQKLMMAGNAQQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMI 234

Query: 551 VQQAVI 556
            Q  +I
Sbjct: 235 AQTFLI 240


>gi|325066325|ref|ZP_08124998.1| 60 kDa inner membrane insertion protein [Actinomyces oris K20]
          Length = 394

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 33/272 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W         +L+ +       + ++I+  T+ V+LL  PL  KQ  ++  M+ +QP++ 
Sbjct: 14  WVMVTIHKALVLIGFPDGPGIAWVLSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPELQ 73

Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----I 449
            L+ K+K        Q + + M+ LY+ H  NP+A C PIL+Q+P+FFA+++V++    +
Sbjct: 74  ALQAKYKGKKDPESRQRMNEEMMALYRKHGTNPMASCLPILVQMPIFFALFRVLASLGAV 133

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-------YLPGFMHVGIWPIIMSLSMF 502
           +      P  G +    A +     ++FG                +      IIMS++ +
Sbjct: 134 AGGTYGRPSIGPLTQQLA-EQVQASSVFGASLSSSFLGSSDTQVKIVTVAMIIIMSVTQW 192

Query: 503 IQM-KMSPPPA--------DKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
             M ++S            +     Q M+L  MPV+F  +  +F  G+++YW  SN+ ++
Sbjct: 193 YTMAQLSMKNMSTDSLNSDNPMIRSQRMMLYVMPVIFAVSGVNFQIGVLVYWVVSNLWTM 252

Query: 551 VQQAVIMKMHG-----AEIGLIDRLRSTFSKN 577
            QQ   ++        AE     R+ +  ++ 
Sbjct: 253 GQQFFTIRNMPAPGSEAEKKYRARINAKRARK 284


>gi|329944746|ref|ZP_08292825.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral
           taxon 170 str. F0386]
 gi|328529882|gb|EGF56772.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral
           taxon 170 str. F0386]
          Length = 403

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 117/253 (46%), Gaps = 28/253 (11%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W         +L+ +       + ++I+  T+ V+LL  PL  KQ  ++  M+ +QP++ 
Sbjct: 14  WVMVTIHKGLVLIGFPDGPGIAWVLSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPEMK 73

Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----I 449
            L+ K+K        Q + + M+ LY+ H  NP+A C PIL+Q+P+FFA+++V++    +
Sbjct: 74  ALQAKYKGKKDPESRQRMNEEMMALYRKHGTNPMASCLPILVQMPIFFALFRVLASLGAV 133

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-------YLPGFMHVGIWPIIMSLSMF 502
           +      P  G +    A +     ++FG                +      IIMS++ +
Sbjct: 134 AGGTYGRPSIGPLTQQLA-EQVQASSVFGASLSSSFMSSADTQVKIVTVAMIIIMSVTQW 192

Query: 503 IQM-KMSPPPA--------DKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
             M +++            +     Q M++  MPV+F  +  +F  G+++YW  SN+ ++
Sbjct: 193 YTMAQLTMKNMSAESMDSDNPMIRSQRMMMYVMPVIFAISGVNFQIGVLVYWVISNLWTM 252

Query: 551 VQQAVIMKMHGAE 563
            QQ   ++   A 
Sbjct: 253 GQQFFTIRNMPAP 265


>gi|152968449|ref|YP_001364233.1| hypothetical protein Krad_4510 [Kineococcus radiotolerans SRS30216]
 gi|151362966|gb|ABS05969.1| 60 kDa inner membrane insertion protein [Kineococcus radiotolerans
           SRS30216]
          Length = 337

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 29/235 (12%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAM 415
           + ++I+   V +++L  PL  KQ  +   M+ IQP++ +++ K+K        Q +Q+ M
Sbjct: 40  WSLSIVGLVVVIRILLIPLFVKQIKAMRGMQVIQPEMRKIQAKYKGKNDPASRQAMQQEM 99

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
           + LY+    NP+A C PILLQ P+F A++  ++               D    D  +  T
Sbjct: 100 MALYRESGTNPMASCLPILLQSPIFLALFHTLNGI----GKGETVGPLDRTLVDQADNAT 155

Query: 476 LFGILPFY----------LPGFMHVGIWPIIMSLSMFIQMKMSPP-----------PADK 514
           +FG                   +   +  ++MSLS F+  K               P  +
Sbjct: 156 IFGSQLSDIFMKSWSTGEWNTIILTAVMIVLMSLSQFVTQKQLMAKNTSSASMEGNPFAQ 215

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            Q M+L  +PV+F  +  +FP G+++YW  +NV S+ QQ  +++       L ++
Sbjct: 216 QQKMMLYILPVIFAVSGVNFPIGVLLYWLTTNVWSMGQQFFVIRRMPNPGSLAEK 270


>gi|284993436|ref|YP_003411991.1| membrane protein insertase, YidC/Oxa1 family [Geodermatophilus
           obscurus DSM 43160]
 gi|284066682|gb|ADB77620.1| membrane protein insertase, YidC/Oxa1 family [Geodermatophilus
           obscurus DSM 43160]
          Length = 385

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 24/227 (10%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           + ++I+   V V+++ FPL  KQ  S   M+ +QP+I  LR K   S  Q   +AM+++ 
Sbjct: 38  WALSIVFLVVTVRVILFPLFVKQVKSQRAMQELQPEIARLR-KQYGSDRQGFSEAMLKMQ 96

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISI---------------SLEMRHAPFWG-WIK 463
           +   ++PLAGC PIL QIP+F +++ V+                 + E   APF+G  I 
Sbjct: 97  RERGVSPLAGCLPILPQIPIFLSLFHVLRRLAPDAQGLYSWSAELTDEAARAPFFGAPIS 156

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-------Q 516
                  +    +  I   Y    +   +  +IMS + F   K     +          Q
Sbjct: 157 SSFFMSGSKEQAILDITGGYGQIRVVAFLLIVIMSFTTFFTQKQIMRRSGPVEGQAAMVQ 216

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            M+L  MP+    +   FP G+++YW  +N+ ++ QQ  I++     
Sbjct: 217 KMLLYVMPLGLFVSGFLFPIGVLLYWFTNNLWTLGQQFFILRKMPPP 263


>gi|289705892|ref|ZP_06502271.1| membrane protein insertase, YidC/Oxa1 family [Micrococcus luteus
           SK58]
 gi|289557377|gb|EFD50689.1| membrane protein insertase, YidC/Oxa1 family [Micrococcus luteus
           SK58]
          Length = 332

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 31/240 (12%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK---- 413
             + ++I+L  V ++ L  PL  KQ  +   M+ IQP++ +L+ K+K    Q+ ++    
Sbjct: 35  WTWALSILLLVVLIRTLLIPLFVKQIKAQRAMQAIQPELQKLQAKYKGKKDQLSRQAMAM 94

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
               L K H  NP A C P+L+Q+P FFA+Y+V+  +   R A   G   D  +A+    
Sbjct: 95  EQQALMKEHKANPFAACLPLLVQMPFFFALYQVLLGA---RGAAERGEAMDALSAEQIRS 151

Query: 474 F---TLFGI-----------LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--------- 510
           F   T+FG             P   P  +   +  ++MS SMF   KM            
Sbjct: 152 FEGSTIFGARMSDTFMNSLGAPGSTPVIVTAIVLILLMSGSMFFMQKMLMTKNMTQQALT 211

Query: 511 -PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            P  + Q ++L  MP++F     +FP G+++YW++SN  ++ QQ  I++ +     L ++
Sbjct: 212 GPMMQTQQVMLYAMPLIFGIGGINFPIGVLLYWTYSNFWAVGQQWWIIRNNPTPGSLAEK 271


>gi|326772847|ref|ZP_08232131.1| stage III sporulation protein J [Actinomyces viscosus C505]
 gi|326637479|gb|EGE38381.1| stage III sporulation protein J [Actinomyces viscosus C505]
          Length = 394

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/272 (23%), Positives = 123/272 (45%), Gaps = 33/272 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W         +L+ +       + ++I+  T+ V+LL  PL  KQ  ++  M+ +QP++ 
Sbjct: 14  WVMVTIHKALVLIGFPDGPGVAWVLSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPEMQ 73

Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----I 449
            L+ K+K        Q + + M+ LY+ H  NP+A C PIL+Q+P+FFA+++V++    +
Sbjct: 74  ALQAKYKGKKDPESRQRMNEEMMALYRKHGTNPMASCLPILVQMPIFFALFRVLASLGAV 133

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-------YLPGFMHVGIWPIIMSLSMF 502
           +      P  G +    A +     ++FG                +      +IMS++ +
Sbjct: 134 AAGKYGRPSIGPLTQQLA-EQVQASSVFGASLSSSFLGSSDTQVKIVTVAMIVIMSVTQW 192

Query: 503 IQM-KMSPPPA--------DKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
             M ++S            +     Q M+L  MPV+F  +  +F  G+++YW  SN+ ++
Sbjct: 193 YTMAQLSMKNMSTDSLNSDNPMIRSQRMMLYVMPVIFAVSGVNFQIGVLVYWVVSNLWTM 252

Query: 551 VQQAVIMKMHG-----AEIGLIDRLRSTFSKN 577
            QQ   ++        AE     R+ +  ++ 
Sbjct: 253 GQQFFTIRNMPAPGSEAEKKYRARINAKRARK 284


>gi|16081156|ref|NP_391984.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str.
           168]
 gi|7676172|sp|Q01625|OXAA1_BACSU RecName: Full=Membrane protein oxaA 1; AltName: Full=Stage III
           sporulation protein J; Flags: Precursor
 gi|40023|emb|CAA44401.1| unnamed protein product [Bacillus subtilis]
 gi|467388|dbj|BAA05234.1| stage III sporulation [Bacillus subtilis]
 gi|2636651|emb|CAB16141.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ
           family) [Bacillus subtilis subsp. subtilis str. 168]
          Length = 261

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 27/246 (10%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +      +  P       +   Y +     ++         N+G++I+L T+ ++LL  
Sbjct: 18  MLLAGCSSVKEPITADSPHFWDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLIL 77

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433
           PL  KQ  S+  M+ +QP++ +L+EK+        Q LQ+  + L++ H +NPLAGC+PI
Sbjct: 78  PLMIKQLRSSKAMQALQPEMQKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPI 137

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+P+    Y  I  +  +     + W  DL   DP                     I 
Sbjct: 138 LIQMPILIGFYHAIMRTQAI-SEHSFLWF-DLGEKDPYY-------------------IL 176

Query: 494 PIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           PI+  ++ F+Q K+        +   AM+L  MP++ +    +FPA L +YW   N+  I
Sbjct: 177 PIVAGVATFVQQKLMMAGNAQQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMI 236

Query: 551 VQQAVI 556
            Q  +I
Sbjct: 237 AQTFLI 242


>gi|257470416|ref|ZP_05634507.1| inner membrane protein [Fusobacterium ulcerans ATCC 49185]
 gi|317064624|ref|ZP_07929109.1| inner membrane protein oxaA [Fusobacterium ulcerans ATCC 49185]
 gi|313690300|gb|EFS27135.1| inner membrane protein oxaA [Fusobacterium ulcerans ATCC 49185]
          Length = 208

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/224 (28%), Positives = 120/224 (53%), Gaps = 22/224 (9%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
            G +  +   +  ++ + ++L GNFG+AI+  T+ +K++  PL  KQ  S  +MK +QP+
Sbjct: 5   SGIYGLLKGVIEAMLVFMHHLTGNFGLAIIGVTILMKIILLPLTLKQDKSMKSMKKLQPE 64

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           +D+L+EK+K   P++L +  ++LY+ H +NP  GC P+L+Q+P+ +A++ V+   + +  
Sbjct: 65  LDKLKEKYKG-DPKMLNQKTMELYQQHKVNPAGGCLPLLVQLPILWALFGVLRGGI-VPQ 122

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
              + W++ L   DP                     I P++  +  F+Q K+     +  
Sbjct: 123 DSTFLWME-LVKPDPFY-------------------ILPVLNGVVSFVQQKVMGSSDNPQ 162

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
              ++   P++ VF     PAGL IYW  S++  ++QQ +IMK 
Sbjct: 163 MKNMMYMFPIMMVFISYKMPAGLQIYWLTSSLAGVIQQYLIMKR 206


>gi|291486743|dbj|BAI87818.1| OxaA-like protein precursor [Bacillus subtilis subsp. natto
           BEST195]
          Length = 260

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 27/246 (10%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +      +  P       +   Y +     ++         N+G++I+L T+ ++LL  
Sbjct: 17  MLLAGCSSVKEPITADSPHFWDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLIL 76

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433
           PL  KQ  S+  M+ +QP++ +L+EK+        Q LQ+  + L++ H +NPLAGC+PI
Sbjct: 77  PLMIKQLRSSKAMQALQPEMQKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPI 136

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+P+    Y  I  +  +     + W  DL   DP                     I 
Sbjct: 137 LIQMPILIGFYHAIMRTQAI-SEHSFLWF-DLGEKDPYY-------------------IL 175

Query: 494 PIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           PI+  ++ F+Q K+        +   AM+L  MP++ +    +FPA L +YW   N+  I
Sbjct: 176 PIVAGVATFVQQKLMMAGNAQQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMI 235

Query: 551 VQQAVI 556
            Q  +I
Sbjct: 236 AQTFLI 241


>gi|282853036|ref|ZP_06262373.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes J139]
 gi|282582489|gb|EFB87869.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes J139]
 gi|314922673|gb|EFS86504.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL001PA1]
 gi|314965757|gb|EFT09856.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL082PA2]
 gi|314982899|gb|EFT26991.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL110PA3]
 gi|315091205|gb|EFT63181.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL110PA4]
 gi|315094439|gb|EFT66415.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL060PA1]
 gi|327328934|gb|EGE70694.1| membrane protein OxaA [Propionibacterium acnes HL103PA1]
          Length = 359

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/275 (21%), Positives = 120/275 (43%), Gaps = 23/275 (8%)

Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368
                   ++      +       L        +         +  +   ++ +AI+  T
Sbjct: 1   MLNPLVILSLGGALHTMGHAIMVPLYWAVSGLLVLFHYLWSPLFGRDSGISWTLAIVCLT 60

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428
           +F++LL  PL  KQ  S  +M+ IQPK+  ++EK+     +   + M+ LY+   +NP A
Sbjct: 61  IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYREEGVNPAA 119

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI-KDLAAADPTNIFTLFG--------- 478
            C P+LLQ+P+F A+++V+  +   R  P   +  K+    +       FG         
Sbjct: 120 SCLPVLLQMPIFLALFRVLDGA--SRGIPRGHFFAKNPGLMESLQHAKFFGAELAGRFLP 177

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFV 528
           +   +    +   +  IIM  ++F       + + PP         Q  ++ +  P++++
Sbjct: 178 MNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYL 237

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           F+  SFP G+++YW  SN+ ++ QQ ++++ +   
Sbjct: 238 FSGVSFPIGVMLYWCTSNLWTLGQQEILIRNNPTP 272


>gi|78043134|ref|YP_358876.1| sporulation associated-membrane protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995249|gb|ABB14148.1| sporulation associated-membrane protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 223

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/203 (30%), Positives = 114/203 (56%), Gaps = 22/203 (10%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           + ++ +AI++ T+ +K++ +PL   Q  S   M+ +QPK+ E+++K+K   PQ  Q+A++
Sbjct: 24  IPSYALAIIMLTILIKIILYPLNHAQMKSMKVMQELQPKMQEIQKKYKN-DPQKQQQALM 82

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAAADPTNIFT 475
           +LYK + +NP++GC P+L+Q+P+  A+Y+ +     +  A   + WI +++  DP     
Sbjct: 83  ELYKEYGVNPMSGCLPMLIQLPILIALYRALYNFKYLNPAHAKFFWIANISHKDPYF--- 139

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSF 534
                           I PI+ +L+ +IQ +M+     D  Q ++L  MP++  +   S 
Sbjct: 140 ----------------ILPILAALTTYIQSRMTMTSGNDPNQKVMLYVMPLMIGWIAMSL 183

Query: 535 PAGLIIYWSWSNVISIVQQAVIM 557
           PAGL IYW   N++ I+QQ  + 
Sbjct: 184 PAGLGIYWVVLNIMGIIQQYFVN 206


>gi|221312087|ref|ZP_03593934.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221316412|ref|ZP_03598217.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221325608|ref|ZP_03606902.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|321313665|ref|YP_004205952.1| OxaA-like protein [Bacillus subtilis BSn5]
 gi|580918|emb|CAA78595.1| SpoIIIJ [Bacillus subtilis subsp. subtilis str. 168]
 gi|320019939|gb|ADV94925.1| OxaA-like protein precursor [Bacillus subtilis BSn5]
          Length = 259

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 27/246 (10%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +      +  P       +   Y +     ++         N+G++I+L T+ ++LL  
Sbjct: 16  MLLAGCSSVKEPITADSPHFWDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLIL 75

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433
           PL  KQ  S+  M+ +QP++ +L+EK+        Q LQ+  + L++ H +NPLAGC+PI
Sbjct: 76  PLMIKQLRSSKAMQALQPEMQKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPI 135

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+P+    Y  I  +  +     + W  DL   DP                     I 
Sbjct: 136 LIQMPILIGFYHAIMRTQAI-SEHSFLWF-DLGEKDPYY-------------------IL 174

Query: 494 PIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           PI+  ++ F+Q K+        +   AM+L  MP++ +    +FPA L +YW   N+  I
Sbjct: 175 PIVAGVATFVQQKLMMAGNAQQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMI 234

Query: 551 VQQAVI 556
            Q  +I
Sbjct: 235 AQTFLI 240


>gi|16804891|ref|NP_466376.1| hypothetical protein lmo2854 [Listeria monocytogenes EGD-e]
 gi|46909042|ref|YP_015431.1| SpoJ protein [Listeria monocytogenes serotype 4b str. F2365]
 gi|47097239|ref|ZP_00234801.1| spoJ protein [Listeria monocytogenes str. 1/2a F6854]
 gi|224498310|ref|ZP_03666659.1| SpoJ protein [Listeria monocytogenes Finland 1988]
 gi|224503080|ref|ZP_03671387.1| SpoJ protein [Listeria monocytogenes FSL R2-561]
 gi|226225403|ref|YP_002759510.1| SpoIIIJ protein [Listeria monocytogenes Clip81459]
 gi|254824783|ref|ZP_05229784.1| spoJ protein [Listeria monocytogenes FSL J1-194]
 gi|254827421|ref|ZP_05232108.1| spoJ protein [Listeria monocytogenes FSL N3-165]
 gi|254830711|ref|ZP_05235366.1| SpoIIIJ protein [Listeria monocytogenes 10403S]
 gi|254851844|ref|ZP_05241192.1| spoJ protein [Listeria monocytogenes FSL R2-503]
 gi|254899689|ref|ZP_05259613.1| SpoIIIJ protein [Listeria monocytogenes J0161]
 gi|254913108|ref|ZP_05263120.1| spoJ protein [Listeria monocytogenes J2818]
 gi|254930872|ref|ZP_05264231.1| spoJ protein [Listeria monocytogenes HPB2262]
 gi|254937489|ref|ZP_05269186.1| OxaA-like protein [Listeria monocytogenes F6900]
 gi|255520073|ref|ZP_05387310.1| SpoIIIJ protein [Listeria monocytogenes FSL J1-175]
 gi|284800259|ref|YP_003412124.1| hypothetical protein LM5578_0004 [Listeria monocytogenes 08-5578]
 gi|284993444|ref|YP_003415212.1| hypothetical protein LM5923_0004 [Listeria monocytogenes 08-5923]
 gi|300763388|ref|ZP_07073386.1| spoJ protein [Listeria monocytogenes FSL N1-017]
 gi|38503109|sp|Q8Y3I2|OXAA1_LISMO RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|67461022|sp|Q71VQ8|OXAA1_LISMF RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|16412354|emb|CAD01067.1| lmo2854 [Listeria monocytogenes EGD-e]
 gi|46882315|gb|AAT05608.1| spoJ protein [Listeria monocytogenes serotype 4b str. F2365]
 gi|47014394|gb|EAL05365.1| spoJ protein [Listeria monocytogenes str. 1/2a F6854]
 gi|225877865|emb|CAS06580.1| Putative SpoIIIJ protein [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258599799|gb|EEW13124.1| spoJ protein [Listeria monocytogenes FSL N3-165]
 gi|258605137|gb|EEW17745.1| spoJ protein [Listeria monocytogenes FSL R2-503]
 gi|258610091|gb|EEW22699.1| OxaA-like protein [Listeria monocytogenes F6900]
 gi|284055821|gb|ADB66762.1| hypothetical protein LM5578_0004 [Listeria monocytogenes 08-5578]
 gi|284058911|gb|ADB69850.1| hypothetical protein LM5923_0004 [Listeria monocytogenes 08-5923]
 gi|293582417|gb|EFF94449.1| spoJ protein [Listeria monocytogenes HPB2262]
 gi|293591110|gb|EFF99444.1| spoJ protein [Listeria monocytogenes J2818]
 gi|293594022|gb|EFG01783.1| spoJ protein [Listeria monocytogenes FSL J1-194]
 gi|300515665|gb|EFK42714.1| spoJ protein [Listeria monocytogenes FSL N1-017]
 gi|328468319|gb|EGF39325.1| hypothetical protein LM1816_03412 [Listeria monocytogenes 1816]
 gi|332313283|gb|EGJ26378.1| Membrane protein oxaA 1 [Listeria monocytogenes str. Scott A]
          Length = 287

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 27/232 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    + +  +     G++ + I++ T+ ++LL  PL  KQ  S   M N+QPKI EL
Sbjct: 45  YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 104

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +EK+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L   DP                     I P++ +L+ F+  K+S       +
Sbjct: 165 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 203

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I      +  
Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 255


>gi|295400330|ref|ZP_06810309.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312111144|ref|YP_003989460.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
           Y4.1MC1]
 gi|294977605|gb|EFG53204.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311216245|gb|ADP74849.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
           Y4.1MC1]
          Length = 251

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 28/252 (11%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
           +   P  E        YF+     +L++  +    N+G+AI++ T+ V+    PL  KQ+
Sbjct: 19  NRNAPIDEHSQGIWDHYFVYPMSKLLLTLGHFFGNNYGVAIIVLTLIVRFCLLPLMIKQF 78

Query: 384 VSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
            +T  M+ ++P++ +L+EK+K +     + LQ+ M+QLY+ H +NP +GC P+L+Q P+F
Sbjct: 79  KTTIAMQKLRPELQKLQEKYKGTDLEAQRKLQQEMMQLYQKHGVNPASGCLPVLIQTPIF 138

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            A+Y  I  + E++    + W++ L   DP                     I PI+ SL+
Sbjct: 139 MALYYAILRTQEIKLHS-FLWVQ-LGHRDPYF-------------------ILPILASLT 177

Query: 501 MFIQMKMSPPPAD---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            FI +++SP   +      AM+   MP++     SS P+ L +YW      SI+Q  +I+
Sbjct: 178 TFISLRLSPSMTEEQMPQMAMMSYIMPIMIFIGASSVPSALSLYWVVGGCFSIIQS-LIL 236

Query: 558 KMHGAEIGLIDR 569
           +M    +   + 
Sbjct: 237 RMQLKAVKAAEN 248


>gi|254384778|ref|ZP_05000115.1| inner membrane protein [Streptomyces sp. Mg1]
 gi|194343660|gb|EDX24626.1| inner membrane protein [Streptomyces sp. Mg1]
          Length = 367

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 26/248 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  +         +  +    +G++I+   + +++   PL  KQ  +T  M+ +QPK+  
Sbjct: 17  WVIVQFHSVYGAIFGADSGWAWGLSIVSLVILIRICLIPLFVKQIKATRGMQALQPKMKA 76

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEM 453
           ++E++K    Q   + M++LYK    NPL+ C PIL Q P FFA+Y V+S      ++ +
Sbjct: 77  IQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSAIANGQTIGV 135

Query: 454 ---------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
                    R A  +G    LAA    +      +        +   +  ++MSLS F  
Sbjct: 136 INQSLLESARQAHIFG--APLAAKFTDSAEKAASLNASITDVRIVTAVMIVLMSLSQFYT 193

Query: 505 MKMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
            +             P  + Q M++   PV+F     +FP G+++YW  +NV ++ QQ  
Sbjct: 194 QRQLMQKNVDLSVKTPFMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMY 253

Query: 556 IMKMHGAE 563
           ++  +   
Sbjct: 254 VINQNPTP 261


>gi|315105159|gb|EFT77135.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL050PA2]
          Length = 359

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/275 (21%), Positives = 120/275 (43%), Gaps = 23/275 (8%)

Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368
                   ++      +       L        +         +  +   ++ +AI+  T
Sbjct: 1   MLNPLVILSLGGALHTMGHAIMVPLYWAVSGLLVLFHYLWSPLFGRDSGISWTLAIVCLT 60

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428
           +F++LL  PL  KQ  S  +M+ IQPK+  ++EK+     +   + M+ LY+   +NP A
Sbjct: 61  IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYREEGVNPAA 119

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI-KDLAAADPTNIFTLFG--------- 478
            C P+LLQ+P+F A+++V+  +   R  P   +  K+    +       FG         
Sbjct: 120 SCLPVLLQMPIFLALFRVLDGA--SRGIPRGHFFAKNPGLMESLQHAKFFGAELAGRFLP 177

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFV 528
           +   +    +   +  IIM  ++F       + + PP         Q  I+ +  P++++
Sbjct: 178 MNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPESLTGPMAQQQKIMIYLFPLMYL 237

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           F+  SFP G+++YW  SN+ ++ QQ ++++ +   
Sbjct: 238 FSGVSFPIGVMLYWCTSNLWTLGQQEILIRNNPTP 272


>gi|119718914|ref|YP_925879.1| putative inner membrane protein translocase component YidC
           [Nocardioides sp. JS614]
 gi|119539575|gb|ABL84192.1| 60 kDa inner membrane insertion protein [Nocardioides sp. JS614]
          Length = 363

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 111/238 (46%), Gaps = 18/238 (7%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           + ++I+  T+ V+ L  PL  KQ  S+ NM+ IQPK+ EL++K+     + L +  ++LY
Sbjct: 43  WVLSIIGLTLTVRALLIPLFVKQIKSSRNMQLIQPKVKELQKKY-GHDRERLAQETMKLY 101

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF----- 474
           K    NP A C P+++Q+P+F A+++++      R        KDLA +  +        
Sbjct: 102 KDSGTNPFASCLPLIIQMPIFLALFRLLDKHAA-RGDGKAFITKDLAESFQSADLFSVPL 160

Query: 475 -TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM----SPPP-----ADKGQAMILNW-M 523
              F          +   I  + M+ + F   +     + PP         Q  +L + +
Sbjct: 161 KATFLRNDGSTAVMVVAAILVLAMTATTFTTQRQLMSKNMPPDALSGPYAQQQKLLLYVL 220

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           PVVF     +FP  ++ YW+ SN+ ++ QQ  +++ + A      + ++   +   ++
Sbjct: 221 PVVFAVGGIAFPVAVLFYWTTSNLWTMGQQFYVIRNNPAPGTAAAQAKADRDRAKAAR 278


>gi|163119737|ref|YP_081441.2| OxaA-like protein [Bacillus licheniformis ATCC 14580]
 gi|145903248|gb|AAU25803.2| SpoIIIJ protein involved in stage III sporulation [Bacillus
           licheniformis ATCC 14580]
          Length = 266

 Score =  138 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 111/255 (43%), Gaps = 27/255 (10%)

Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367
           L         +     ++  P       +   Y +     ++         NFG+AI++ 
Sbjct: 9   LLFSMIGVIVLLAGCTEINQPITAESEGFWNTYIVYPLSQLITYVANLTNENFGLAIIIV 68

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNI 424
           T+ ++LL  PL  KQ  S+  M+ +QP++ +LREK+        Q LQ+  + L + H +
Sbjct: 69  TILIRLLILPLMIKQTKSSKAMQALQPEMQKLREKYSSKDQKTQQKLQQETMALMQKHGV 128

Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484
           NPLAGC+PIL+Q+P+    Y  I  + E+     + W  DL   DP              
Sbjct: 129 NPLAGCFPILIQMPILIGFYHAIMRTREIA-EHSFLWF-DLGERDPYF------------ 174

Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIY 541
                  I PI+  +  FIQ K+        +   AM+L  MP++ V    SFPA L +Y
Sbjct: 175 -------ILPILAGVFTFIQQKLMMAGTAQQNPQMAMMLWLMPIMIVVFAISFPAALSLY 227

Query: 542 WSWSNVISIVQQAVI 556
           W   N+  I Q   I
Sbjct: 228 WVVGNLFMIAQTFFI 242


>gi|50843790|ref|YP_057017.1| putative inner membrane protein translocase component YidC
           [Propionibacterium acnes KPA171202]
 gi|289424430|ref|ZP_06426213.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes SK187]
 gi|295131878|ref|YP_003582541.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes SK137]
 gi|50841392|gb|AAT84059.1| conserved membrane protein [Propionibacterium acnes KPA171202]
 gi|289155127|gb|EFD03809.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes SK187]
 gi|291377350|gb|ADE01205.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes SK137]
 gi|313771070|gb|EFS37036.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL074PA1]
 gi|313792572|gb|EFS40658.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL110PA1]
 gi|313803573|gb|EFS44755.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL110PA2]
 gi|313811765|gb|EFS49479.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL083PA1]
 gi|313814225|gb|EFS51939.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL025PA1]
 gi|313815413|gb|EFS53127.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL059PA1]
 gi|313829185|gb|EFS66899.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL063PA2]
 gi|313832299|gb|EFS70013.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL007PA1]
 gi|313832759|gb|EFS70473.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL056PA1]
 gi|313839618|gb|EFS77332.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL086PA1]
 gi|314916209|gb|EFS80040.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL005PA4]
 gi|314917476|gb|EFS81307.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL050PA1]
 gi|314921812|gb|EFS85643.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL050PA3]
 gi|314930923|gb|EFS94754.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL067PA1]
 gi|314955281|gb|EFS99686.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL027PA1]
 gi|314959154|gb|EFT03256.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL002PA1]
 gi|314963877|gb|EFT07977.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL082PA1]
 gi|314969087|gb|EFT13185.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL037PA1]
 gi|314975194|gb|EFT19289.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL053PA1]
 gi|314977606|gb|EFT21701.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL045PA1]
 gi|314985207|gb|EFT29299.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL005PA1]
 gi|315078989|gb|EFT51001.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL053PA2]
 gi|315081501|gb|EFT53477.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL078PA1]
 gi|315097166|gb|EFT69142.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL038PA1]
 gi|315099346|gb|EFT71322.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL059PA2]
 gi|315102313|gb|EFT74289.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL046PA1]
 gi|315107502|gb|EFT79478.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL030PA1]
 gi|315109870|gb|EFT81846.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL030PA2]
 gi|327332496|gb|EGE74231.1| membrane protein OxaA [Propionibacterium acnes HL096PA2]
 gi|327446727|gb|EGE93381.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL043PA2]
 gi|327448831|gb|EGE95485.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL043PA1]
 gi|327454248|gb|EGF00903.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL087PA3]
 gi|327456308|gb|EGF02963.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL083PA2]
 gi|327457418|gb|EGF04073.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL092PA1]
 gi|328756006|gb|EGF69622.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL087PA1]
 gi|328758849|gb|EGF72465.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL025PA2]
 gi|328759807|gb|EGF73398.1| membrane protein OxaA [Propionibacterium acnes HL099PA1]
          Length = 359

 Score =  138 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/275 (21%), Positives = 120/275 (43%), Gaps = 23/275 (8%)

Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368
                   ++      +       L        +         +  +   ++ +AI+  T
Sbjct: 1   MLNPLVILSLGGALHTMGHAIMVPLYWAVSGLLVLFHYLWSPLFGRDSGISWTLAIVCLT 60

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428
           +F++LL  PL  KQ  S  +M+ IQPK+  ++EK+     +   + M+ LY+   +NP A
Sbjct: 61  IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYREEGVNPAA 119

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI-KDLAAADPTNIFTLFG--------- 478
            C P+LLQ+P+F A+++V+  +   R  P   +  K+    +       FG         
Sbjct: 120 SCLPVLLQMPIFLALFRVLDGA--SRGIPRGHFFAKNPGLMESLQHAKFFGAELAGRFLP 177

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFV 528
           +   +    +   +  IIM  ++F       + + PP         Q  ++ +  P++++
Sbjct: 178 MNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYL 237

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           F+  SFP G+++YW  SN+ ++ QQ ++++ +   
Sbjct: 238 FSGVSFPIGVMLYWCTSNLWTLGQQEILIRNNPTP 272


>gi|56420357|ref|YP_147675.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426]
 gi|56380199|dbj|BAD76107.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426]
          Length = 249

 Score =  138 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 72/245 (29%), Positives = 126/245 (51%), Gaps = 27/245 (11%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
           +   P  E        YF+     +L++  +    N+GIAI++ T+ V+    PL  KQ+
Sbjct: 19  NRNEPINEHSQGIWNHYFVYPMSKLLLTLGHWFGDNYGIAIIVLTLIVRFCLLPLILKQF 78

Query: 384 VSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
            ++  M+ ++P++ +L+EK+K   P   + LQ+ M+QLY+ H +NP +GC P+L+Q+P+F
Sbjct: 79  RASLAMQKLRPELLKLQEKYKSKDPETQRKLQQEMMQLYQKHGVNPASGCLPVLIQMPIF 138

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            A+Y  IS + E++    + W++ L   DP                     I P++ +L+
Sbjct: 139 MALYYAISRTQEIKTHS-FLWVE-LGHRDPYF-------------------ILPVLAALT 177

Query: 501 MFIQMKMSPPPAD---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            FI +++SP  A+      AM+L  MPV+     SS P+ L +YW      SI+Q  ++ 
Sbjct: 178 TFISLRLSPSMAEEQMPQMAMMLYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLILR 237

Query: 558 KMHGA 562
               A
Sbjct: 238 SQLKA 242


>gi|314929150|gb|EFS92981.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL044PA1]
 gi|328905781|gb|EGG25557.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium sp.
           P08]
          Length = 359

 Score =  138 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 118/266 (44%), Gaps = 23/266 (8%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           +      +       L        +         +  +   ++ +AI+  T+F++LL  P
Sbjct: 10  LGGALHAMGHAIMVPLYWAVSGLIVLFHYLWSPLFGRDSGISWTLAIVCLTIFIRLLLVP 69

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437
           L  KQ  S  +M+ IQPK+  ++EK+     +   + M+ LY+   +NP A C P+LLQ+
Sbjct: 70  LFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYREEGVNPAASCLPVLLQM 128

Query: 438 PVFFAIYKVISISLEMRHAPFWGWIK-DLAAADPTNIFTLFG---------ILPFYLPGF 487
           P+F A+++V+  +   R  P   +   +    +       FG         +   +    
Sbjct: 129 PIFLALFRVLDGA--SRGIPRGHFFAENPKLMESLQHAKFFGAELAGRFLPMNNGFGGTQ 186

Query: 488 MHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFVFALSSFPAG 537
           +   +  ++M  ++F       + + PP         Q  ++ +  P++++F+  SFP G
Sbjct: 187 VVALVLIVVMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYLFSGVSFPIG 246

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563
           +++YW  SN+ ++ QQ ++++ +   
Sbjct: 247 VMLYWCTSNLWTLGQQEILIRNNPTP 272


>gi|225424558|ref|XP_002282031.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296081405|emb|CBI16838.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  138 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 24/278 (8%)

Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLT 367
              T+ +   D A+   +      W   I   M  ++          ++   +G AI+L 
Sbjct: 67  RVETLLYTIADAAVSASDGKQSGDWLSGITNYMETVLKVLKGGLSTLHVPYAYGFAIILL 126

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427
           TV VK   FPL KKQ  S   M+++QP+I  +++++     + +Q    +LYK   INPL
Sbjct: 127 TVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQRYAG-DQERIQLETARLYKLAGINPL 185

Query: 428 AGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP-------TNIFTLF-- 477
           AGC P L  IPV+  +Y+ +S  + E      + WI  L+           + I  LF  
Sbjct: 186 AGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLSGPTTIAARQNGSGISWLFPF 245

Query: 478 --GILPFYLPGFMHVGIWPIIMSLSMFI--QMKMSPPPADK---GQAMILNWMPVVFVFA 530
             G  P      +   + P+++ +S +I  Q+  S    D        +  ++P++  + 
Sbjct: 246 VDGHPPLGWSDTLAYLVLPMLLIVSQYISVQIMQSSQSNDPSLKTSQALTKFLPLMIGYF 305

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
             S P+GL +YW  +N++S  QQ  + K+ GA+I +  
Sbjct: 306 ALSVPSGLSLYWFTNNILSTAQQVWLQKLGGAQIPVKQ 343


>gi|323341096|ref|ZP_08081344.1| stage III sporulation protein J [Lactobacillus ruminis ATCC 25644]
 gi|323091517|gb|EFZ34141.1| stage III sporulation protein J [Lactobacillus ruminis ATCC 25644]
          Length = 268

 Score =  138 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 110/252 (43%), Gaps = 31/252 (12%)

Query: 338 WFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           W ++I       +         N+G  I++ T+ V+++  PL   Q  S      IQP++
Sbjct: 26  WDHYIIWNFIRAIQGLSRIFGHNYGWGIVVFTIIVRIIILPLMIYQMKSMRKTTEIQPQL 85

Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
             L++K+         +++ +   +LY    +NP+AGC P+L+Q+P+  A+Y+ I  S  
Sbjct: 86  MALQKKYPDRSDPEQMRMMSEEQKRLYAEAGVNPVAGCLPLLVQMPILIALYQAIFRSET 145

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           ++    + W++ L   DP                     I PI+ ++  F+   +S    
Sbjct: 146 LK-TGKFLWMQ-LGDKDPYY-------------------ILPILAAIFTFLTSWLSVKAQ 184

Query: 513 DKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            +  AM   ++ +MP++ +    S PA L +YW  +N  S+ Q  +I   +  +I     
Sbjct: 185 PEKNAMTTGMMVFMPLMILVTAISVPAALSLYWVVTNAFSVGQTLLIN--NPFKIQRERE 242

Query: 570 LRSTFSKNYNSQ 581
            ++   K    +
Sbjct: 243 EKARLEKKKARK 254


>gi|168063889|ref|XP_001783900.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664583|gb|EDQ51297.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 321

 Score =  138 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 66/245 (26%), Positives = 120/245 (48%), Gaps = 22/245 (8%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           +  ++G AI+L T+ VK   +PL KKQ  ST  M+N+QPKI  ++ +++    + +Q   
Sbjct: 34  IPYSYGFAIILLTILVKAATYPLTKKQVESTLAMQNLQPKIKAIQTRYQG-DQERIQLET 92

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIF 474
            +LYK   +NPLAGC P L  +PV+  +Y+ +S  + E      + WI  LA        
Sbjct: 93  ARLYKQAGVNPLAGCLPTLATLPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAAR 152

Query: 475 TLFGILPFYLPGF-----------MHVGIWPIIMSLSMFIQMKMSPPPA--DKGQ---AM 518
           +    + +  P             +   + P+++  S ++ M++  PP   D  Q    +
Sbjct: 153 SSGSGISWLFPFVDGAPSLGWADTIAYLVLPVLLIGSQYVSMQIMQPPTTNDPAQNQSQL 212

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI----DRLRSTF 574
           IL ++P++  +   S P+GL +YW  +NV+S  QQ  + ++ GA+  +       + +  
Sbjct: 213 ILKFLPLMIGYFSLSVPSGLSLYWLTNNVLSTAQQVYLRQLGGAQPIVDKEGSGIISAGQ 272

Query: 575 SKNYN 579
           +K   
Sbjct: 273 AKRTP 277


>gi|168046980|ref|XP_001775950.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672782|gb|EDQ59315.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 313

 Score =  138 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 71/246 (28%), Positives = 121/246 (49%), Gaps = 23/246 (9%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           L  ++G AI+L TV VK   +PL KKQ  ST  M+N+QPKI  ++ +++    + +Q   
Sbjct: 60  LPYSYGFAIILLTVIVKAATYPLTKKQVESTLAMQNLQPKIKAIQTRYQG-DQERIQLET 118

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP---- 470
            +LYK   +NPLAGC P L  +PV+  +Y+ +S  + E      + WI  LA        
Sbjct: 119 ARLYKQAGVNPLAGCLPTLATLPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAAR 178

Query: 471 ---TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQ---A 517
              + I  LF    G  P      +   + P+++  S ++ M++  P     D  Q    
Sbjct: 179 SSGSGISWLFPFVDGAPPLGWGDTIAYLVLPVLLIGSQYVSMQIMQPATASNDPAQNQSQ 238

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI----DRLRST 573
           +IL ++P++  +   S P+GL +YW  +NV+S  QQ  + ++ GA+  +       + + 
Sbjct: 239 LILKFLPLMIGYFSLSVPSGLSLYWLTNNVLSTAQQVYLRQLGGAQPIVDKEGSGIISAG 298

Query: 574 FSKNYN 579
            +K   
Sbjct: 299 QAKRTP 304


>gi|56965876|ref|YP_177610.1| stage III sporulation protein J [Bacillus clausii KSM-K16]
 gi|56912122|dbj|BAD66650.1| stage III sporulation protein J [Bacillus clausii KSM-K16]
          Length = 284

 Score =  138 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 24/246 (9%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W  F   P+  L+      V ++G AI++ TV  +++  PL  KQ  S   M+ +QP++
Sbjct: 34  IWNSFFVYPLSRLIILIAGWVSSYGWAIIVVTVLFRIVLLPLMVKQTKSMKAMQQLQPEM 93

Query: 397 DELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
            +LR+K+         +    M +L+  H +NP AGC P+L+Q+P+F AIY  I  +   
Sbjct: 94  QKLRQKYSAKDKNTQMQLNTEMQKLFSEHKVNPFAGCLPLLVQMPIFLAIYHAIMRTPNF 153

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           +    + W   L   DP                     I P++  +  FIQ KM     +
Sbjct: 154 QGES-FAWFV-LNNPDPYF-------------------ILPVLACILTFIQQKMMMVQDN 192

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
               ++L  MP++ +      PA +I+YW   N+  I+Q   I   +  + GL   + + 
Sbjct: 193 PQMKILLYAMPIMILVVGIFLPAAVILYWVVGNIFMIMQTYFITGPNAGKRGLEATVETA 252

Query: 574 FSKNYN 579
            +    
Sbjct: 253 AASKAK 258


>gi|52788049|ref|YP_093878.1| OxaA-like protein precursor [Bacillus licheniformis ATCC 14580]
 gi|319648516|ref|ZP_08002732.1| SpoIIIJ protein [Bacillus sp. BT1B_CT2]
 gi|52350551|gb|AAU43185.1| SpoIIIJ [Bacillus licheniformis ATCC 14580]
 gi|317389595|gb|EFV70406.1| SpoIIIJ protein [Bacillus sp. BT1B_CT2]
          Length = 265

 Score =  138 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 111/255 (43%), Gaps = 27/255 (10%)

Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367
           L         +     ++  P       +   Y +     ++         NFG+AI++ 
Sbjct: 8   LLFSMIGVIVLLAGCTEINQPITAESEGFWNTYIVYPLSQLITYVANLTNENFGLAIIIV 67

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNI 424
           T+ ++LL  PL  KQ  S+  M+ +QP++ +LREK+        Q LQ+  + L + H +
Sbjct: 68  TILIRLLILPLMIKQTKSSKAMQALQPEMQKLREKYSSKDQKTQQKLQQETMALMQKHGV 127

Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484
           NPLAGC+PIL+Q+P+    Y  I  + E+     + W  DL   DP              
Sbjct: 128 NPLAGCFPILIQMPILIGFYHAIMRTREIA-EHSFLWF-DLGERDPYF------------ 173

Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIY 541
                  I PI+  +  FIQ K+        +   AM+L  MP++ V    SFPA L +Y
Sbjct: 174 -------ILPILAGVFTFIQQKLMMAGTAQQNPQMAMMLWLMPIMIVVFAISFPAALSLY 226

Query: 542 WSWSNVISIVQQAVI 556
           W   N+  I Q   I
Sbjct: 227 WVVGNLFMIAQTFFI 241


>gi|47093230|ref|ZP_00231003.1| spoJ protein [Listeria monocytogenes str. 4b H7858]
 gi|47018424|gb|EAL09184.1| spoJ protein [Listeria monocytogenes str. 4b H7858]
          Length = 267

 Score =  138 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 27/232 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    + +  +     G++ + I++ T+ ++LL  PL  KQ  S   M N+QPKI EL
Sbjct: 25  YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 84

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +EK+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 85  QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 144

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L   DP                     I P++ +L+ F+  K+S       +
Sbjct: 145 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 183

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I      +  
Sbjct: 184 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 235


>gi|313835175|gb|EFS72889.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL037PA2]
 gi|314970899|gb|EFT14997.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL037PA3]
          Length = 359

 Score =  138 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/275 (20%), Positives = 118/275 (42%), Gaps = 23/275 (8%)

Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368
                    +      +       L        +         +  +   ++ +AI+  T
Sbjct: 1   MLNPLVIFGLGGALHAMGHAIMVPLYWAVSGLIVLFHYLWSPLFGRDSGISWTLAIVCLT 60

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428
           +F++LL  PL  KQ  S  +M+ IQPK+  ++EK+     +   + M+ LY+   +NP A
Sbjct: 61  IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYREEGVNPAA 119

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK-DLAAADPTNIFTLFG--------- 478
            C P+LLQ+P+F A+++V+  +   R  P   +   +    +       FG         
Sbjct: 120 SCLPVLLQMPIFLALFRVLDGA--SRGIPRGHFFAENPKLMESLQHAKFFGAELAGRFLP 177

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFV 528
           +   +    +   +  ++M  ++F       + + PP         Q  ++ +  P++++
Sbjct: 178 MNNGFGGTQVVALVLIVVMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYL 237

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           F+  SFP G+++YW  SN+ ++ QQ ++++ +   
Sbjct: 238 FSGVSFPIGVMLYWCTSNLWTLGQQEILIRNNPTP 272


>gi|256833763|ref|YP_003162490.1| 60 kDa inner membrane insertion protein [Jonesia denitrificans DSM
           20603]
 gi|256687294|gb|ACV10187.1| 60 kDa inner membrane insertion protein [Jonesia denitrificans DSM
           20603]
          Length = 315

 Score =  138 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/267 (22%), Positives = 118/267 (44%), Gaps = 23/267 (8%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W  ++    F+ +         + +A++  T+ +++L  PL  KQ  ++  M+ IQP++ 
Sbjct: 16  WIMYLCHTFFVFLGLPDGSGVAWILAVVGLTIVIRVLIIPLFFKQIKASRAMQMIQPELQ 75

Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
            +++K+K        + + +  + LY  H  NPLA C PILLQ P+FF +++V++   E+
Sbjct: 76  AIQKKYKNKTDPASREAMGRETMALYSKHGTNPLASCMPILLQTPIFFGLFRVLNGLDEI 135

Query: 454 R-HAPFWGWIK-------DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
                  G I        + +     ++ + F   P      +   +  ++M  +++I  
Sbjct: 136 AAGGSAIGPINTEVATQIENSQLFGASLSSTFLHEPTDPNTKIVSAVLIVLMCATLYITQ 195

Query: 506 K---MSPPPADKGQ------AMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           +   M   PA   Q        I+ ++ P +   +  +FP G++IYW  SN+ S  QQ  
Sbjct: 196 RQLTMKNMPASAMQGPMAQTQKIMLYLIPGMMAVSGVNFPIGVLIYWVVSNLWSTGQQFY 255

Query: 556 -IMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            I +M         R+    ++    +
Sbjct: 256 TINRMPTPGSEAEKRMNERKARKAAKK 282


>gi|313765030|gb|EFS36394.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL013PA1]
          Length = 359

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/275 (21%), Positives = 120/275 (43%), Gaps = 23/275 (8%)

Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368
                   ++      +       L        +         +  +   ++ +AI+  T
Sbjct: 1   MLNPLVILSLGGALHTMGHAIMVPLYWAVSGLLVLFHYLWSPLFGRDSGISWTLAIVCLT 60

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428
           +F++LL  PL  KQ  S  +M+ IQPK+  ++EK+     +   + M+ LY+   +NP A
Sbjct: 61  IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYRDEGVNPAA 119

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI-KDLAAADPTNIFTLFG--------- 478
            C P+LLQ+P+F A+++V+  +   R  P   +  K+    +       FG         
Sbjct: 120 SCLPVLLQMPIFLALFRVLDGA--SRGIPRGHFFAKNPGLMESLQHAKFFGAELAGRFLP 177

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFV 528
           +   +    +   +  IIM  ++F       + + PP         Q  ++ +  P++++
Sbjct: 178 MNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYL 237

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           F+  SFP G+++YW  SN+ ++ QQ ++++ +   
Sbjct: 238 FSGVSFPIGVMLYWCTSNLWTLGQQEILIRNNPTP 272


>gi|255326485|ref|ZP_05367567.1| 60 kDa inner membrane insertion protein [Rothia mucilaginosa ATCC
           25296]
 gi|255296525|gb|EET75860.1| 60 kDa inner membrane insertion protein [Rothia mucilaginosa ATCC
           25296]
          Length = 329

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/252 (21%), Positives = 105/252 (41%), Gaps = 24/252 (9%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
                ++   +F  +         + + I+  T+ ++ L  PL  KQ  +   M  +Q  
Sbjct: 15  VSVVLWLFHTLFTSLGMDPASGLTWVLCIIFLTLVMRTLTIPLFVKQIKAMRGMTAMQGD 74

Query: 396 IDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           + +L+EK+K        Q + +  +++Y+ H  NP A C PIL Q+P+FF +Y+V+    
Sbjct: 75  MAKLQEKYKGKKDQLSRQAMAQEQMEMYRKHGTNPFASCLPILAQMPIFFGLYQVLMGVP 134

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPF----------YLPGFMHVGIWPIIMSLSM 501
               +     +         N   +FG   F               +   I  ++MS + 
Sbjct: 135 TAAQSNESVLMLPADLVHQFNDSQIFGAQLFATMLHPGAGDTTATVVQAVIMIVLMSATQ 194

Query: 502 FIQMKM----SPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           F   K     +        P  + Q MI+   P++F  +  +FP G++ YW+ SN+ S+ 
Sbjct: 195 FYIQKQLSVKNMSEAALNSPMFRQQQMIMYIFPIIFAVSGINFPLGVMYYWTVSNLWSLG 254

Query: 552 QQAVIMKMHGAE 563
           QQ  +++ +   
Sbjct: 255 QQWWVIRNNPTP 266


>gi|289436080|ref|YP_003465952.1| stage III sporulation protein J [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|289172324|emb|CBH28870.1| stage III sporulation protein J [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 287

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 31/251 (12%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    +++  +     G++ + I++ T+ ++LL  PL  KQ  S   M N+QPKI EL
Sbjct: 45  YIVFPLSWVITWFSDLFGGSYAVGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKIKEL 104

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           + K+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 105 QTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIK-T 163

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L + DP                     I PI+ +L+ F   K+S       +
Sbjct: 164 DTFLWMQ-LGSPDPYF-------------------ILPIVAALTTFASSKISMMGQTQQN 203

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG----LIDR 569
           K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I      +         +
Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263

Query: 570 LRSTFSKNYNS 580
           L     K   +
Sbjct: 264 LEEERLKKKAA 274


>gi|167629167|ref|YP_001679666.1| stage iii sporulation protein j/oxaa-like protein precursor
           [Heliobacterium modesticaldum Ice1]
 gi|167591907|gb|ABZ83655.1| stage iii sporulation protein j/oxaa-like protein precursor
           [Heliobacterium modesticaldum Ice1]
          Length = 222

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 70/238 (29%), Positives = 119/238 (50%), Gaps = 28/238 (11%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
                 F +   F  +      + ++G+AI+L T+ +K+L +PL+ KQ  S   M  + P
Sbjct: 3   QMLVDAFSSMINFFYIITQQIGIPSYGLAIILITIVIKMLLYPLSAKQMKSMKVMAELAP 62

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           K   L+EK+ +  PQ  Q+AM+QLYK H +NPL+GC P+L+Q P+  A Y  +     + 
Sbjct: 63  KQKALQEKY-KKDPQKAQEAMMQLYKEHGVNPLSGCLPLLIQFPILIAFYNGLMAFPYLN 121

Query: 455 HAP-FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---- 509
            A   + W+ +L+A DP                     I P++ + + F+QMK++P    
Sbjct: 122 EAHATFLWVANLSAPDPY--------------------ILPLLATATTFLQMKVTPSSAG 161

Query: 510 --PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             P A++ Q +++  MP++  +   SF AGL +YW   N + I+QQ  + +       
Sbjct: 162 GNPQAEQTQKIMMYSMPLLIGWMAHSFAAGLSLYWVTFNTVGILQQLYMNRSLNVRKE 219


>gi|259047909|ref|ZP_05738310.1| stage III sporulation protein J [Granulicatella adiacens ATCC
           49175]
 gi|259035443|gb|EEW36698.1| stage III sporulation protein J [Granulicatella adiacens ATCC
           49175]
          Length = 270

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 26/240 (10%)

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
             ++       G++G+ I+  T+  +L+  PL   QY ST     +QP+I  LREK+   
Sbjct: 44  QFIIWLSDLFGGSYGLGIIFFTIITRLIMVPLMHFQYQSTRKQAILQPEIKALREKYSAR 103

Query: 407 P---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463
                ++LQ  M  LY+   IN  AGC P+L+Q+PV  A+Y+ IS + E+     + W +
Sbjct: 104 DRATQEMLQAEMNALYEREGINQYAGCLPLLIQLPVMMALYQAISRT-EVLKTGHFLWFQ 162

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK--GQAMILN 521
            L   DP                     I P++ +++ FI   +S    D       ++ 
Sbjct: 163 -LDQPDPYF-------------------ILPVLAAVTTFITTWLSMKMQDTGGAGKAMMY 202

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +MPV+ +F      + L +YW   NV  + Q  ++      +      +     +    +
Sbjct: 203 FMPVMILFMSLGLASALSLYWVVGNVFMVGQTLLLNNPFKFQEEQKAIIAEKKRRQKALE 262


>gi|302535577|ref|ZP_07287919.1| inner membrane protein [Streptomyces sp. C]
 gi|302444472|gb|EFL16288.1| inner membrane protein [Streptomyces sp. C]
          Length = 368

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
             +G++I+   + +++   PL  KQ  +T  M+ +QPK+  ++E++K    Q   + M++
Sbjct: 36  WAWGLSIVSLVILIRICLIPLFVKQIKATRGMQALQPKMKAIQERYKNDK-QRQSEEMMK 94

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEM---------RHAPFWGWIK 463
           LYK    NPL+ C PIL Q P FFA+Y V++      ++ +         R A  +G   
Sbjct: 95  LYKETGTNPLSSCLPILAQSPFFFALYHVLASIANGKTIGVINQPLLESARQAHIFG--A 152

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---------PPADK 514
            LAA    +   +  +        +   +  ++MSLS F   +             P  +
Sbjct: 153 PLAAKFMDSAEKVAALDASITNVRIVTAVMIVMMSLSQFYTQRQLMQKNVDLSVKTPFMQ 212

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            Q M++   PV+F     +FP G+++YW  +NV ++ QQ  ++  +   
Sbjct: 213 QQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMYVINQNPTP 261


>gi|291303914|ref|YP_003515192.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290573134|gb|ADD46099.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 366

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 67/279 (24%), Positives = 120/279 (43%), Gaps = 39/279 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
              +        +    N    + +AI+   V ++++ FPL  KQ  S   M+ +QPK+ 
Sbjct: 19  HDLWDLILGADPVPGALNTSWQWILAIVFLVVTIRIVLFPLFVKQIKSQRAMQRLQPKMK 78

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           EL++++K    + LQK M++LY+T   NPL GC P+LLQ PVF A+  V+      +++ 
Sbjct: 79  ELQQRYKG-DRETLQKEMMELYRTEKANPLMGCLPMLLQAPVFIALLWVLRRIDPDKYSN 137

Query: 458 F----WGWIKDLAAADPTNIFTLFGILPF-----------------------YLPGFMHV 490
           +    + W +  A  D      LFG   +                        L   +  
Sbjct: 138 YAKTLYTWTE--AQWDSAINAKLFGAPIWATFLTTQKDLKCSEHYDSCTTAATLNVQLVS 195

Query: 491 GIWPIIMSLSMFIQMK----MSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYW 542
           GI   +M ++ ++  +     +   AD  Q MI   M    PV+ +F+   FP G+++YW
Sbjct: 196 GILIALMIVTTYLTTRQMILKTGWNADPQQRMIQKLMLYGIPVMLLFSGGIFPIGVVLYW 255

Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +N  S+ QQ  +++ +          ++       S+
Sbjct: 256 VVNNAFSLGQQIWVLRKYP-PPKTDTSPKADIKAKPGSK 293


>gi|327334553|gb|EGE76264.1| membrane protein OxaA [Propionibacterium acnes HL097PA1]
          Length = 359

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 59/275 (21%), Positives = 121/275 (44%), Gaps = 23/275 (8%)

Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368
                   ++      +       L        +         +  +   ++ +AI+  T
Sbjct: 1   MLNPLVILSLGGALHTMGHAIMVPLYWAVSGLLVLFHYLWSPLFGRDSGISWTLAIVCLT 60

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428
           +F++LL  PL  KQ  S  +M+ IQPK+  ++EK+     +   + M+ LY+   +NP A
Sbjct: 61  IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYREEGVNPAA 119

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI-KDLAAADPTNIFTLFG--------- 478
            C P+LLQ+P+F A+++V+  +   R  P   +  K+    +       FG         
Sbjct: 120 SCLPVLLQMPIFLALFRVLDGA--SRGIPRGHFFAKNPGLMESLQHAKFFGAELAGRFLP 177

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFV 528
           +   +    +   +  IIM  ++F       + + PP         Q  ++ +  P++++
Sbjct: 178 MNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYL 237

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           F+  SFP G+++YWS SN+ ++ QQ ++++ +   
Sbjct: 238 FSGVSFPIGVMLYWSTSNLWTLGQQEILIRNNPTP 272


>gi|154688209|ref|YP_001423370.1| OxaA-like protein precursor [Bacillus amyloliquefaciens FZB42]
 gi|154354060|gb|ABS76139.1| SpoIIIJ [Bacillus amyloliquefaciens FZB42]
          Length = 259

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 27/246 (10%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +      +  P       +   Y +     ++         N+G++I++ T+ ++LL  
Sbjct: 16  VLLAGCSSVKEPITANSPHFWDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTILIRLLIL 75

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433
           PL  KQ  S+  M+ +QP++ +LREK+        Q LQ+  + L+  H +NPLAGC+PI
Sbjct: 76  PLMIKQLRSSKAMQALQPEMQKLREKYSSKDQKTQQKLQQETMALFSKHGVNPLAGCFPI 135

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+P+    Y  I  +  +     + W  DL   DP                     I 
Sbjct: 136 LIQMPILIGFYHAIMRTQAISQHS-FLWF-DLGEKDPYY-------------------IL 174

Query: 494 PIIMSLSMFIQMKMSP---PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           PI+  ++ F+Q K+     P  +   AM++  MP++ +    +FP+ L +YW   N+  I
Sbjct: 175 PIVAGVATFVQQKLMMAGNPTQNPQMAMMVWIMPIMIIVFAINFPSALSLYWVVGNLFMI 234

Query: 551 VQQAVI 556
            Q  +I
Sbjct: 235 AQTFLI 240


>gi|184202000|ref|YP_001856207.1| hypothetical protein KRH_23540 [Kocuria rhizophila DC2201]
 gi|183582230|dbj|BAG30701.1| OxaA family protein [Kocuria rhizophila DC2201]
          Length = 327

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 111/255 (43%), Gaps = 30/255 (11%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
                +    +F L+         + + I+  T+ ++ L  PL  KQ  S   M+ +QP+
Sbjct: 15  VSAVLWAFHELFTLIGLDPTSGFTWVLCIVGLTLVMRTLTIPLFLKQIKSMRGMQELQPE 74

Query: 396 IDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           + +L+ K+K    Q+ ++      + LYK H  NP A C PI++Q+P+FFA+++V+    
Sbjct: 75  LAKLQAKYKGKKDQLSRQAMAEEQMALYKEHGSNPFAACLPIIVQMPIFFALFQVLRSVP 134

Query: 452 EMRHAPFWGWIKDLAAADPTNIFT---LFGILPFYL----------PGFMHVGIWPIIMS 498
               A        L      + F    +FG   F               +   +  + MS
Sbjct: 135 ---QAAANNEAIHLLTPQMVHEFNESTIFGAPLFSTLMQPGTGNHAATVVLALVMIVAMS 191

Query: 499 LSMFIQMKM----SPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
            + FI  K     +        P  + Q M+L   P++F     +FP G+++YW+ SN+ 
Sbjct: 192 ATQFITQKQLTSRNMSDSAKESPMYRQQQMMLYLFPLIFAIGGINFPLGVLVYWTVSNLW 251

Query: 549 SIVQQAVIMKMHGAE 563
           S+ QQ  +++ +  +
Sbjct: 252 SMGQQWWVIRNNPTK 266


>gi|255025588|ref|ZP_05297574.1| SpoIIIJ protein [Listeria monocytogenes FSL J2-003]
          Length = 283

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 27/232 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    + +  +     G++ + I++ T+ ++LL  PL  KQ  S   M N+QPKI EL
Sbjct: 45  YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 104

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +EK+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L   DP                     I P++ +L+ F+  K+S       +
Sbjct: 165 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 203

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I      +  
Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 255


>gi|315286678|ref|ZP_07872171.1| stage III sporulation protein J [Listeria ivanovii FSL F6-596]
 gi|313630899|gb|EFR98590.1| stage III sporulation protein J [Listeria ivanovii FSL F6-596]
          Length = 287

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 27/232 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    +++  +     G++ + I++ T+ ++LL  PL  KQ  S   M N+QPKI EL
Sbjct: 45  YIVFPLSWVITWFSDLFGGSYAVGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKIKEL 104

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           + K+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 105 QTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L + DP                     I PI+ +L+ F   K+S       +
Sbjct: 165 S-FLWMQ-LGSPDPYF-------------------ILPIVAALTTFASSKISMMGQTQQN 203

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I      +  
Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 255


>gi|163943166|ref|YP_001648050.1| OxaA-like protein precursor [Bacillus weihenstephanensis KBAB4]
 gi|229136311|ref|ZP_04265058.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST196]
 gi|229170189|ref|ZP_04297875.1| Membrane protein oxaA 1 [Bacillus cereus AH621]
 gi|163865363|gb|ABY46422.1| 60 kDa inner membrane insertion protein [Bacillus
           weihenstephanensis KBAB4]
 gi|228613290|gb|EEK70429.1| Membrane protein oxaA 1 [Bacillus cereus AH621]
 gi|228647183|gb|EEL03271.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST196]
          Length = 255

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 72/258 (27%), Positives = 118/258 (45%), Gaps = 27/258 (10%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
              L A       I     +   P           YF+     ++  +      N+G+AI
Sbjct: 4   KIGLLAMVIMLMAIATGCSETNQPITPKSTGIWNEYFVYPLSQLITYFAELFGSNYGLAI 63

Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421
           ++TT+ ++    PL  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ 
Sbjct: 64  VVTTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           + +NPLAGC PI +Q+P+ FA Y  I  +  +     + W  DL  ADP           
Sbjct: 124 NGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI-SEHTFLWF-DLGQADPFY--------- 172

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538
                     I PI+ +++ FIQ K++       +   AM++  MP++ +    +FPA L
Sbjct: 173 ----------ILPIVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAAL 222

Query: 539 IIYWSWSNVISIVQQAVI 556
            +YW   N+  I Q  +I
Sbjct: 223 SLYWVVGNIFGIAQMYMI 240


>gi|303286693|ref|XP_003062636.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545]
 gi|226456153|gb|EEH53455.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545]
          Length = 483

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 24/269 (8%)

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFY---NLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
           IP  +     G      +    ++       N+  ++G AI++ TV VKL+ FPL KKQ 
Sbjct: 105 IPGLQKGGWLGPITDFLEASLGVIDQGLEGLNVPYSYGYAILVLTVVVKLVTFPLTKKQV 164

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
             +  M+ +QP++ EL+  +    P+ LQ    +LYK  N NPLAGC P    +PVF  +
Sbjct: 165 EGSIAMQALQPRVKELQAMYAN-DPERLQMETARLYKEANFNPLAGCLPTFATLPVFIGL 223

Query: 444 YKVISIS-LEMRHAPFWGWIKDLAAA-------DPTNIFTLF----GILPFYLPGFMHVG 491
           Y+ +S +  E      + WI  L          D +    L+    G  P          
Sbjct: 224 YRALSNAATEGMLEDGFYWIPSLGGPTSIAARNDGSGFSWLWPFVDGAPPLGWHDTAAYL 283

Query: 492 IWPIIMSLSMFIQMK-MSPPPA---DKGQ---AMILNWMPVVFVFALSSFPAGLIIYWSW 544
             P+++ +S F   K M+P      D  Q     IL ++P +  F   + PAGL +YW  
Sbjct: 284 ALPVLLVVSQFASQKIMTPDQGKDVDPSQASSQAILKFLPFMIGFFSLNVPAGLTLYWFA 343

Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           +N+ S  Q   + +        I  +   
Sbjct: 344 NNIFSTAQTVYL-RKTTKAPDSIQNVGGG 371


>gi|108805992|ref|YP_645929.1| protein translocase subunit yidC [Rubrobacter xylanophilus DSM
           9941]
 gi|108767235|gb|ABG06117.1| protein translocase subunit yidC [Rubrobacter xylanophilus DSM
           9941]
          Length = 278

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 39/220 (17%)

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           Y+L   + ++I L TV V+ L FPL  KQ  S   ++ ++P+I  ++ +++ +P Q+  +
Sbjct: 32  YDLGVEWWLSIALLTVVVRALLFPLTLKQMKSMRALQELRPEIQRIQRQYRDNP-QLRNQ 90

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI----------------SLEMRHAP 457
            M++LY+  N+NPL GC P+L+Q+P+F  I+ VI                  + E     
Sbjct: 91  EMMKLYQERNVNPLGGCLPLLVQMPIFIGIFYVIREFGGYSYGGRVVEPSEPTFE---TG 147

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
              W +DL+ ADP                     I P++ +L+M    ++S    +  Q 
Sbjct: 148 GILWFQDLSQADPYY-------------------ILPVLSALTMLAGTEISAKYMEPQQR 188

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            I+  +P      L +FPAGL +YW  +N+++I Q   I 
Sbjct: 189 WIMRIVPFAITLFLWNFPAGLFVYWISNNLVTIAQNYFIY 228


>gi|310659886|ref|YP_003937607.1| sec-independent factor for membrane protein insertion [Clostridium
           sticklandii DSM 519]
 gi|308826664|emb|CBH22702.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ
           family) [Clostridium sticklandii]
          Length = 228

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 75/238 (31%), Positives = 127/238 (53%), Gaps = 24/238 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              ++     L+   YN++G++ I+I++ TV VKLL  PL   Q  S  +M+ IQPK+DE
Sbjct: 1   MSQLSYLFGSLLELIYNVIGDYAISIIVFTVVVKLLLLPLTLTQTKSMKSMQLIQPKMDE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL------E 452
           +++K++  P +   + +++LYK H +NPLAGC P+L+Q P+   ++  +   +      E
Sbjct: 61  IKKKYQNDPDK-QNQKIMELYKEHKVNPLAGCLPLLIQFPIIIGLFNALREPVKYVFGTE 119

Query: 453 MRHA---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
             +      + W+ +LA+ D   I      +PF         I PI+ +++ +IQ  M  
Sbjct: 120 AAYKIADTGFLWVNNLASPDV--ILLGGISIPF---------ILPILAAITTYIQSAMMS 168

Query: 510 PPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           P     D  Q M+L   P++ +F   SFPAGL++YW   N+  IVQQ ++ K   A+ 
Sbjct: 169 PKGGKKDPTQTMMLYMFPIMMLFWGISFPAGLLLYWVAGNIFQIVQQYILSKPSKAKE 226


>gi|308175811|ref|YP_003922516.1| Inner membrane protein oxaA [Bacillus amyloliquefaciens DSM 7]
 gi|307608675|emb|CBI45046.1| Inner membrane protein oxaA [Bacillus amyloliquefaciens DSM 7]
          Length = 259

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 27/246 (10%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +      +  P       +   Y +     ++         N+G++I++ T+ ++LL  
Sbjct: 16  VLLAGCSSVKEPITANSPHFWDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTILIRLLIL 75

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433
           PL  KQ  S+  M+ +QP++ +LREK+        Q LQ+  + L+  H +NPLAGC+PI
Sbjct: 76  PLMIKQLRSSKAMQALQPEMQKLREKYSSKDQKTQQKLQQETMALFSKHGVNPLAGCFPI 135

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+P+    Y  I  +  +     + W  DL   DP                     I 
Sbjct: 136 LIQMPILIGFYHAIMRTQAISQHS-FLWF-DLGEKDPYY-------------------IL 174

Query: 494 PIIMSLSMFIQMKMSP---PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           PI+  ++ F+Q K+     P  +   AM++  MP++ +    +FP+ L +YW   N+  I
Sbjct: 175 PIVAGVATFVQQKLMMAGNPSQNPQMAMMVWIMPIMIIVFAINFPSALSLYWVVGNLFMI 234

Query: 551 VQQAVI 556
            Q  +I
Sbjct: 235 AQTFLI 240


>gi|308179187|ref|YP_003918593.1| preprotein translocase subunit YidC [Arthrobacter arilaitensis
           Re117]
 gi|307746650|emb|CBT77622.1| putative preprotein translocase subunit YidC [Arthrobacter
           arilaitensis Re117]
          Length = 324

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 30/256 (11%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
             W  +    +F  +    +    + ++I+   + ++ L  P+  KQ  S   M+ +QP 
Sbjct: 16  VSWVLWAFHELFTTIGMNADSGVTWTLSIIFLVLLIRTLLIPVFVKQIKSQRAMQALQPD 75

Query: 396 IDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           + +L+ K+K    Q+    + +    L+K H  NPL+ C P+L+Q+P FFA+++V++ + 
Sbjct: 76  LRKLQAKYKGKTDQMSRQAMVQEQQALFKKHKTNPLSSCLPLLVQMPFFFALFRVLNEA- 134

Query: 452 EMRHAPFWGWIKDLAA-----ADPTNIFTLFGILPF---------YLPGFMHVGIWPIIM 497
             R +     I  L+A      D ++I        F              +   +  + M
Sbjct: 135 -SRASDDGRSIGALSAEHIRSFDQSSILGAPLSETFLGTINSGAVNWAVIIVAVVMILAM 193

Query: 498 SLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
           + S F   +              P  + Q M+L  +P+VF     +FP G++IYW+ SN+
Sbjct: 194 TASQFFTQRQLMTKNMSAEALQGPFMQQQKMMLYILPLVFGIGGINFPIGVLIYWTASNL 253

Query: 548 ISIVQQAVIMKMHGAE 563
            ++ QQ  +++ +   
Sbjct: 254 WTLGQQFWVIRNNPTP 269


>gi|229014652|ref|ZP_04171766.1| Membrane protein oxaA 1 [Bacillus mycoides DSM 2048]
 gi|228746663|gb|EEL96552.1| Membrane protein oxaA 1 [Bacillus mycoides DSM 2048]
          Length = 255

 Score =  137 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 27/258 (10%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
              L A       I     +   P           YF+     ++  +      N+G+AI
Sbjct: 4   KIGLLAMVIMLMAIATGCSETNQPITPKSTGIWNEYFVYPLSQLITYFAELFGSNYGLAI 63

Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421
           ++TT+ ++    PL  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ 
Sbjct: 64  VVTTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           + +NPLAGC PI +Q+P+ FA Y  I  +  +     + W  DL  ADP           
Sbjct: 124 NGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI-SEHTFLWF-DLGQADPFY--------- 172

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538
                     I P++ +++ FIQ K++       +   AM++  MP++ +    +FPA L
Sbjct: 173 ----------ILPVVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAAL 222

Query: 539 IIYWSWSNVISIVQQAVI 556
            +YW   N+  I Q  +I
Sbjct: 223 SLYWVVGNIFGIAQMYMI 240


>gi|313635501|gb|EFS01736.1| stage III sporulation protein J [Listeria seeligeri FSL N1-067]
          Length = 287

 Score =  137 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 31/251 (12%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    +++  +     G++ I I++ T+ ++LL  PL  KQ  S   M N+QPKI EL
Sbjct: 45  YIVFPLSWVITWFSDLFGGSYAIGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKIKEL 104

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           + K+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 105 QTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIK-T 163

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L + DP                     I PI+ +L+ F   K+S       +
Sbjct: 164 DTFLWMQ-LGSPDPYF-------------------ILPIVAALTTFASSKISMMGQTQQN 203

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG----LIDR 569
           K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I      +         +
Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263

Query: 570 LRSTFSKNYNS 580
           L     K   +
Sbjct: 264 LEEERLKKKAA 274


>gi|84497198|ref|ZP_00996020.1| putative inner membrane protein translocase component YidC
           [Janibacter sp. HTCC2649]
 gi|84382086|gb|EAP97968.1| putative inner membrane protein translocase component YidC
           [Janibacter sp. HTCC2649]
          Length = 335

 Score =  137 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 61/273 (22%), Positives = 116/273 (42%), Gaps = 27/273 (9%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+L+ W  + F     ++ +         + ++I+   + ++    PL  KQ  ++  M+
Sbjct: 13  ELLVAWIMYGFHQAFTWIGLDPAS--GAAWALSIIGLVLVMRAAMIPLFVKQINASRKMQ 70

Query: 391 NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            IQP++ ++++K+K        Q + +  + LYK+   NP + C PIL+Q P FF +++V
Sbjct: 71  MIQPELQKIQKKYKGKSDPESRQAMTQETMALYKSEGTNPFSSCLPILVQSPFFFGLFRV 130

Query: 447 ISIS--LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIM 497
           ++    +        G I    A       TLFG                +   +  ++M
Sbjct: 131 LNGLKGISEGTKDPIGPITRTVAK-QAESATLFGAQLSDKFIGAETTTTKVVTILLIVLM 189

Query: 498 SLSMFIQMKMSPPPADK----------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
           S + F   +                   Q +I+  MPVVF  +  +FP G+++YW  +NV
Sbjct: 190 SATTFTTQRQLMTKNMPASALDNPFAKQQKLIMYVMPVVFAVSGINFPIGVLLYWFTTNV 249

Query: 548 ISIVQQAVIMKMHGAEIGLIDR-LRSTFSKNYN 579
            S+ QQ  +++   A     +R L    +K   
Sbjct: 250 WSMTQQFYVIRKMPAPGSAAERALHERLAKRGK 282


>gi|328555787|gb|AEB26279.1| OxaA-like protein precursor [Bacillus amyloliquefaciens TA208]
 gi|328914176|gb|AEB65772.1| Inner membrane protein oxaA [Bacillus amyloliquefaciens LL3]
          Length = 249

 Score =  137 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 27/246 (10%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +      +  P       +   Y +     ++         N+G++I++ T+ ++LL  
Sbjct: 6   VLLAGCSSVKEPITANSPHFWDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTILIRLLIL 65

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433
           PL  KQ  S+  M+ +QP++ +LREK+        Q LQ+  + L+  H +NPLAGC+PI
Sbjct: 66  PLMIKQLRSSKAMQALQPEMQKLREKYSSKDQKTQQKLQQETMALFSKHGVNPLAGCFPI 125

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+P+    Y  I  +  +     + W  DL   DP                     I 
Sbjct: 126 LIQMPILIGFYHAIMRTQAISQHS-FLWF-DLGEKDPYY-------------------IL 164

Query: 494 PIIMSLSMFIQMKMSP---PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           PI+  ++ F+Q K+     P  +   AM++  MP++ +    +FP+ L +YW   N+  I
Sbjct: 165 PIVAGVATFVQQKLMMAGNPSQNPQMAMMVWIMPIMIIVFAINFPSALSLYWVVGNLFMI 224

Query: 551 VQQAVI 556
            Q  +I
Sbjct: 225 AQTFLI 230


>gi|150392475|ref|YP_001322524.1| 60 kDa inner membrane insertion protein [Alkaliphilus
           metalliredigens QYMF]
 gi|149952337|gb|ABR50865.1| 60 kDa inner membrane insertion protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 220

 Score =  137 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 67/235 (28%), Positives = 120/235 (51%), Gaps = 32/235 (13%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
             F A+P+  L+   ++L+GN+G++I++ T+ VKLL  PL  KQ  S   M+ +QP+I +
Sbjct: 1   MRFFAQPLGALLKLIFDLIGNYGVSIIVFTILVKLLLLPLTLKQTRSMRQMQEVQPEIKK 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------SISL 451
           L+EK+K    Q+  K  +++Y  +N++P  GC P+L+Q P+   ++  +         S 
Sbjct: 61  LQEKYKNDKEQLNAK-TMEIYAKYNVSPFGGCLPLLVQFPILIGLFTALRDPATYVFGSA 119

Query: 452 EMRHA--PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           E+  +    + W+ +L+ ADP                     + P++  ++ F+  K   
Sbjct: 120 EIYASINTSFLWLSNLSDADPW--------------------VLPLLAGITTFLSSKTMS 159

Query: 510 P--PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
               AD+ Q M+   MP++  +   SFPAGL +YW  SN+   VQQ ++ +    
Sbjct: 160 TGKQADQTQKMMTYGMPLMIFWWGRSFPAGLTLYWVVSNLFQFVQQLLMNRSQDK 214


>gi|328950558|ref|YP_004367893.1| membrane protein insertase, YidC/Oxa1 family [Marinithermus
           hydrothermalis DSM 14884]
 gi|328450882|gb|AEB11783.1| membrane protein insertase, YidC/Oxa1 family [Marinithermus
           hydrothermalis DSM 14884]
          Length = 449

 Score =  137 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 66/240 (27%), Positives = 121/240 (50%), Gaps = 26/240 (10%)

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
                  L     +  ++  +  +M   Y   GN+G+AI++ T+FV+LL +PL  +Q+ S
Sbjct: 231 GYYDLPGLFQANIWGTLSLGLIYIMETAYRFTGNWGLAILVLTLFVRLLLWPLMHQQFKS 290

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
            A +  ++P +DE+ +K+K  P +   +A++++Y+ H +NP +GC P+ +Q+P+ F +++
Sbjct: 291 MAELNRLKPLMDEINKKYKNDPEKR-TEALMKMYQEHKVNPASGCLPLFIQLPILFILWR 349

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
           VI+   E      + W+ DLA  DP                     I PI+    M +Q 
Sbjct: 350 VIAN-FEFGQ--GFLWLPDLALPDPYY-------------------ILPILYVGVMIVQT 387

Query: 506 KMSP-PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +      D  +  I  +M + FV+ +  FP+G+ +YW +S +I + QQ +I K  G   
Sbjct: 388 LLMAHGNKDIIRQSI--FMNLFFVYLVLQFPSGVTLYWVFSTLIGLGQQLLINKQLGITP 445


>gi|295394850|ref|ZP_06805063.1| membrane protein OxaA [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972183|gb|EFG48045.1| membrane protein OxaA [Brevibacterium mcbrellneri ATCC 49030]
          Length = 319

 Score =  137 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 65/248 (26%), Positives = 109/248 (43%), Gaps = 23/248 (9%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W        F  +         +  AI   T+ V+ +  PL   Q  +   M+ +QP++ 
Sbjct: 17  WILAFFHMAFTALGMSPTAGWTWVAAIAGLTIVVRAVLIPLFVYQIKAQRKMQLLQPEMM 76

Query: 398 ELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           EL++K+K    Q  ++        L+K H  NP A C P+L+Q+P+FF++++VI  + E 
Sbjct: 77  ELQKKYKGKRDQFSRQQMAEEQQALFKKHGTNPFASCLPLLVQMPIFFSLFRVIRNT-EG 135

Query: 454 RHAPFWGWIKDLAA--ADPTNIFTLFGI------LPFYLPGFMHVGIWPIIMSLSMFIQM 505
                   I  L    A      ++FG+      L   L   +   I  +IM ++ FI  
Sbjct: 136 IGNGDIPPIGGLTQELASQATHASIFGVELSDTFLQGDLGTKVLTAILIVIMGVTQFITQ 195

Query: 506 KMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           +              P  + Q M+L  MP++F      FP GLI+YW  SNV ++VQQ +
Sbjct: 196 RQIMAKNMSEAAMNNPFMQQQKMLLYMMPIIFAVGGIYFPLGLIVYWLVSNVWTMVQQFI 255

Query: 556 IMKMHGAE 563
           +++     
Sbjct: 256 VIRNMPTP 263


>gi|254991919|ref|ZP_05274109.1| SpoIIIJ protein [Listeria monocytogenes FSL J2-064]
          Length = 287

 Score =  137 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 119/235 (50%), Gaps = 28/235 (11%)

Query: 338 WFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           W ++I  P+  ++ +F     G++ + I++ T+ ++LL  PL  KQ  S   M N+QPKI
Sbjct: 42  WSHYIVYPLSAVIKWFSELFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101

Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
            EL+EK+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS +  +
Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAAI 161

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510
           +    + W++ L   DP                     I P++ +L+ F+  K+S     
Sbjct: 162 KG-DTFLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQT 200

Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             +K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I      +  
Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 255


>gi|289427470|ref|ZP_06429183.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes J165]
 gi|289159400|gb|EFD07591.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes J165]
 gi|313806852|gb|EFS45350.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL087PA2]
 gi|313817639|gb|EFS55353.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL046PA2]
 gi|313821536|gb|EFS59250.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL036PA1]
 gi|313824520|gb|EFS62234.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL036PA2]
 gi|313826189|gb|EFS63903.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL063PA1]
 gi|314926337|gb|EFS90168.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL036PA3]
 gi|314961659|gb|EFT05760.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL002PA2]
 gi|314980261|gb|EFT24355.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL072PA2]
 gi|314987116|gb|EFT31208.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL005PA2]
 gi|314990682|gb|EFT34773.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL005PA3]
 gi|315083075|gb|EFT55051.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL027PA2]
 gi|315086609|gb|EFT58585.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL002PA3]
 gi|315088011|gb|EFT59987.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL072PA1]
 gi|327333669|gb|EGE75386.1| membrane protein OxaA [Propionibacterium acnes HL096PA3]
 gi|327444473|gb|EGE91127.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL013PA2]
 gi|328757980|gb|EGF71596.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium
           acnes HL020PA1]
 gi|332676743|gb|AEE73559.1| membrane protein OxaA [Propionibacterium acnes 266]
          Length = 359

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 58/275 (21%), Positives = 119/275 (43%), Gaps = 23/275 (8%)

Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368
                   ++      +       L        +         +  +   ++ +AI+  T
Sbjct: 1   MLNPLVILSLGGALHTMGHAIMVPLYWAVSGLLVLFHYLWSPLFGRDSGISWTLAIVCLT 60

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428
           +F++LL  PL  KQ  S  +M+ IQPK+  ++EK+     +   + M+ LY+   +NP A
Sbjct: 61  IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYREEGVNPAA 119

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI-KDLAAADPTNIFTLFG--------- 478
            C P+LLQ+P+F A+++V+      R  P   +  K+    +       FG         
Sbjct: 120 SCLPVLLQMPIFLALFRVLDGV--SRGIPRGHFFAKNPGLMESLQHAKFFGAELAGRFLP 177

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFV 528
           +   +    +   +  IIM  ++F       + + PP         Q  ++ +  P++++
Sbjct: 178 MNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYL 237

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           F+  SFP G+++YW  SN+ ++ QQ ++++ +   
Sbjct: 238 FSGVSFPIGVMLYWCTSNLWTLGQQEILIRNNPTP 272


>gi|283458991|ref|YP_003363641.1| preprotein translocase subunit YidC [Rothia mucilaginosa DY-18]
 gi|283135056|dbj|BAI65821.1| preprotein translocase subunit YidC [Rothia mucilaginosa DY-18]
          Length = 329

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 55/252 (21%), Positives = 104/252 (41%), Gaps = 24/252 (9%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
                ++   +F  +         + + I+  T+ ++ L  PL  KQ  +   M  +Q  
Sbjct: 15  VSVVLWLFHTLFTSLGMDPASGLTWVLCIIFLTLVMRTLTIPLFVKQIKAMRGMTAMQGD 74

Query: 396 IDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           + +L+EK+K        Q + +  +++Y+ H  NP A C PIL Q+P+FF +Y+V+    
Sbjct: 75  MAKLQEKYKGKKDQLSRQAMAQEQMEMYRKHGTNPFASCLPILAQMPIFFGLYQVLMSVP 134

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL----------PGFMHVGIWPIIMSLSM 501
                     +         N   +FG   F               +   I  ++MS + 
Sbjct: 135 TAAQNNQGVLMLPAELVHQFNDSQIFGAQLFATMMHPGAGDATATVVQAVIMIVLMSATQ 194

Query: 502 FIQMKM----SPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           F   K     +        P  + Q MI+   P++F  +  +FP G++ YW+ SN+ S+ 
Sbjct: 195 FYIQKQLSVKNMSEAALNSPMFRQQQMIMYIFPIIFAVSGINFPLGVLYYWTVSNLWSLG 254

Query: 552 QQAVIMKMHGAE 563
           QQ  +++ +   
Sbjct: 255 QQWWVIRNNPTP 266


>gi|288554603|ref|YP_003426538.1| OxaA-like protein precursor [Bacillus pseudofirmus OF4]
 gi|288545763|gb|ADC49646.1| OxaA-like protein precursor SpoIIIJ [Bacillus pseudofirmus OF4]
          Length = 255

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 25/242 (10%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W  +   P+  L+ YF   + ++G++I++ T+ ++LL  PL  KQ  S   M+ IQP++ 
Sbjct: 36  WNSYFVYPLSWLIIYFGEALNSYGLSIIVVTILLRLLILPLMIKQTKSAKAMQAIQPEMQ 95

Query: 398 ELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           +LREK+    Q   Q LQ+ M+ +++   +NPLAGC P+ +Q+P+  A Y  I  +  + 
Sbjct: 96  KLREKYSAKDQKTQQKLQQEMMAMFQERGVNPLAGCLPLFVQMPILLAFYHAIMRTDVIG 155

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
           +   + W + L A DP                     + PI+  ++ FIQ KM     + 
Sbjct: 156 NYS-FLWFE-LGAPDPF--------------------VLPIVAGITTFIQQKMMMVTDNP 193

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574
              ++L  MPV+       FPA L +YW   N++ I Q   I   +  +    +      
Sbjct: 194 QMKILLYVMPVMIFVFAMFFPAALTLYWVVGNLVMITQTYFITGPNVGKDKTAEAAAGGK 253

Query: 575 SK 576
            K
Sbjct: 254 KK 255


>gi|221321325|ref|ZP_03602619.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str.
           JH642]
          Length = 259

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 27/246 (10%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +      +  P       +   Y +     ++         N+G++I+L T+ ++LL  
Sbjct: 16  MLLAGCSSVKEPITADSPHFWDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLIL 75

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433
           PL  KQ  S+  M+ +QP++ +L+EK+        Q LQ+  + L++ H +NPLAGC+PI
Sbjct: 76  PLMIKQLRSSKAMQALQPEMQKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPI 135

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+++P+    Y  I  +  +     + W  DL   DP                     I 
Sbjct: 136 LIKMPILIGFYHAIMRTQAI-SEHSFLWF-DLGEKDPYY-------------------IL 174

Query: 494 PIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           PI+  ++ F+Q K+        +   AM+L  MP++ +    +FPA L +YW   N+  I
Sbjct: 175 PIVAGVATFVQQKLMMAGNAQQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMI 234

Query: 551 VQQAVI 556
            Q  +I
Sbjct: 235 AQTFLI 240


>gi|260887480|ref|ZP_05898743.1| stage III sporulation protein J [Selenomonas sputigena ATCC 35185]
 gi|330840118|ref|YP_004414698.1| membrane protein insertase, YidC/Oxa1 family [Selenomonas sputigena
           ATCC 35185]
 gi|260862767|gb|EEX77267.1| stage III sporulation protein J [Selenomonas sputigena ATCC 35185]
 gi|329747882|gb|AEC01239.1| membrane protein insertase, YidC/Oxa1 family [Selenomonas sputigena
           ATCC 35185]
          Length = 222

 Score =  136 bits (342), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 21/206 (10%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
             N+GIAI+L T+ +K+  +PL  KQ  S   M+ +QPK+ +L+EK+K +P Q++Q+ + 
Sbjct: 31  FENYGIAIILLTILIKVCLYPLTVKQVRSMKGMQELQPKMKKLQEKYKDNP-QMMQQKIG 89

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LYK   +NPLAGC P+L+Q+P+   ++  +         P + W+  L+  DP      
Sbjct: 90  ELYKEAGVNPLAGCLPLLIQMPILMGMFYALQG-YAYSGTPSFLWLASLSEPDPHY---- 144

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536
                          I P++ +LS +   K +    ++   +++  MP+   +   +F +
Sbjct: 145 ---------------ILPVLSALSTWFVQKQTSTETNQQMKIMMIVMPIFIGWISLNFAS 189

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGA 562
           GL++YW   N++ IVQQ  + +    
Sbjct: 190 GLVLYWVTMNLVQIVQQWWMYRNEDV 215


>gi|260101881|ref|ZP_05752118.1| stage III sporulation protein J [Lactobacillus helveticus DSM
           20075]
 gi|260084309|gb|EEW68429.1| stage III sporulation protein J [Lactobacillus helveticus DSM
           20075]
 gi|328463993|gb|EGF35491.1| stage III sporulation protein [Lactobacillus helveticus MTCC 5463]
          Length = 298

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 111/264 (42%), Gaps = 21/264 (7%)

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379
                   P      +W   + +      ++     +  ++G AI++ T+ ++++  PL 
Sbjct: 39  QSANGHVAPVLHNSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIIRVILLPLN 98

Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQ 436
                ST  M+ IQP+I+ELR+K+     +     Q+   +LYK   +NP  GC P+L+Q
Sbjct: 99  AISIRSTTKMQGIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQ 158

Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           +PV +A+Y  I  + ++     + W+ DL+  DP  I  +  +               + 
Sbjct: 159 LPVMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAM---------------VF 201

Query: 497 MSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
             LS +I    +P  A  G   ++ + M ++      +F + + +YW  SN+   VQ  +
Sbjct: 202 TFLSTYISQLATPKSAQNGMTKVMTYGMAIIVGVMALNFQSAITLYWVISNLFQAVQTFI 261

Query: 556 IMKMHGAEIGLIDRLRSTFSKNYN 579
           +      +     +  +   +   
Sbjct: 262 LQNPIKFKKEQEAKAEAERERKRK 285


>gi|317126737|ref|YP_004100849.1| membrane protein insertase, YidC/Oxa1 family [Intrasporangium
           calvum DSM 43043]
 gi|315590825|gb|ADU50122.1| membrane protein insertase, YidC/Oxa1 family [Intrasporangium
           calvum DSM 43043]
          Length = 373

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/273 (20%), Positives = 115/273 (42%), Gaps = 26/273 (9%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             I  G  + +    ++           + ++I+  TV V++L  PL  +Q  S+  M+ 
Sbjct: 10  YPIKLGEAWVMYAWHWLFDLIGLPTGWAWALSIVGLTVVVRVLLIPLFVRQIHSSRKMQL 69

Query: 392 IQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           IQP++ ++++K+K        +  Q  ++ LY+    NP + C PILLQ P FFA+++++
Sbjct: 70  IQPEMQKIQKKYKGKRDPESQKAQQAEIMDLYRRTGTNPFSSCLPILLQSPFFFALFQLL 129

Query: 448 SISLEMR------HAPFWGWIKD---LAAADP---TNIFTLFGILPFYLPGFMHVGIWPI 495
           +    +            G I     L+  D     +  +   +        +   +   
Sbjct: 130 NNLKSIAEGNIKGGGSPVGPITKAVALSIEDSRIFGSRLSDAFLTSPGTSTKILAAVLIA 189

Query: 496 IMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWS 545
            MS++ F       + + P          Q  +L + MP+ F  +  +FP G++IYW+ +
Sbjct: 190 AMSVTTFTTQHQLMRKNMPASALDNPFAKQQKVLLYLMPIFFAISGVNFPVGVLIYWTTT 249

Query: 546 NVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           N+ ++ QQ  +++   A   L  +      +  
Sbjct: 250 NLWTMGQQFYVIRNMPAPGSLAYQAMEERDRRK 282


>gi|323703944|ref|ZP_08115574.1| membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum
           nigrificans DSM 574]
 gi|323531102|gb|EGB21011.1| membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum
           nigrificans DSM 574]
          Length = 229

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 123/229 (53%), Gaps = 26/229 (11%)

Query: 336 WGWFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           +GWF +I   M  LM+  Y       V ++ +AI++ TV +K+  +PL+KKQ  S   M+
Sbjct: 2   FGWFDYIKTGMTDLMNLLYGFTVQIGVPSYALAIIILTVIIKMALYPLSKKQMRSMVMMQ 61

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            + P+I ++++K+K   PQ +Q+ +++LYK +N+NP+AGC P+L+Q+P+  A+Y+ +   
Sbjct: 62  KLAPEIKQIQDKYKGKDPQKMQQMIMELYKENNVNPMAGCLPLLIQMPILIALYRALYAF 121

Query: 451 LEMRHAP-FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
                A   + W++ L+           G +P             I+ + + ++Q +++ 
Sbjct: 122 PFKNPAHAHFLWVESLSK---------TGDIP-----------LAILAAATTYLQSRLTT 161

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              D+ Q  +L  MP+   +   + PAGL +YW   N++  +QQ  I K
Sbjct: 162 NTQDQTQRTMLYMMPLFIGWIAYTVPAGLALYWVVFNIVGTIQQWFINK 210


>gi|161508219|ref|YP_001578190.1| stage III sporulation protein [Lactobacillus helveticus DPC 4571]
 gi|160349208|gb|ABX27882.1| Stage III sporulation protein [Lactobacillus helveticus DPC 4571]
          Length = 291

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 111/264 (42%), Gaps = 21/264 (7%)

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379
                   P      +W   + +      ++     +  ++G AI++ T+ ++++  PL 
Sbjct: 32  QSANGHVAPVLHNSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIIRVILLPLN 91

Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQ 436
                ST  M+ IQP+I+ELR+K+     +     Q+   +LYK   +NP  GC P+L+Q
Sbjct: 92  AISIRSTTKMQGIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQ 151

Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           +PV +A+Y  I  + ++     + W+ DL+  DP  I  +  +               + 
Sbjct: 152 LPVMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAM---------------VF 194

Query: 497 MSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
             LS +I    +P  A  G   ++ + M ++      +F + + +YW  SN+   VQ  +
Sbjct: 195 TFLSTYISQLATPKSAQNGMTKVMTYGMAIMVGVMALNFQSAITLYWVISNLFQAVQTFI 254

Query: 556 IMKMHGAEIGLIDRLRSTFSKNYN 579
           +      +     +  +   +   
Sbjct: 255 LQNPIKFKKEQEAKAEAERERKRK 278


>gi|229065145|ref|ZP_04200438.1| Membrane protein oxaA 1 [Bacillus cereus AH603]
 gi|228716174|gb|EEL67893.1| Membrane protein oxaA 1 [Bacillus cereus AH603]
          Length = 246

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     +   P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 8   IATGCSETNQPITPKSTGIWNEYFVYPLSQLITYFAELFGSNYGLAIVVTTLIIRFALLP 67

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 68  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  +  +     + W  DL  ADP                     I P
Sbjct: 128 VQMPILFAFYHAIMRTTAI-SEHTFLWF-DLGQADPFY-------------------ILP 166

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           I+ +++ FIQ K++       +   AM++  MP++ +    +FPA L +YW   N+  I 
Sbjct: 167 IVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIA 226

Query: 552 QQAVI 556
           Q  +I
Sbjct: 227 QMYMI 231


>gi|315273159|ref|ZP_07869206.1| stage III sporulation protein J [Listeria marthii FSL S4-120]
 gi|313616210|gb|EFR89288.1| stage III sporulation protein J [Listeria marthii FSL S4-120]
          Length = 287

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 27/230 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    + +  +     G++ + I++ T+ ++LL  PL  KQ  S   M N+QPKI EL
Sbjct: 45  YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 104

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +EK+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L   DP                     I P++ +L+ F+  K+S       +
Sbjct: 165 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 203

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           K  AMI+  MPV+ +F   + P+ L +YW   NV ++ Q  +I      +
Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNVFTVFQTLLINNPFKNK 253


>gi|217965938|ref|YP_002351616.1| membrane protein OxaA 1 [Listeria monocytogenes HCC23]
 gi|290892034|ref|ZP_06555031.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|217335208|gb|ACK41002.1| membrane protein OxaA 1 [Listeria monocytogenes HCC23]
 gi|290558628|gb|EFD92145.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|307572445|emb|CAR85624.1| membrane protein oxaA 1 precursor [Listeria monocytogenes L99]
          Length = 287

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 115/230 (50%), Gaps = 27/230 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    + +  +     G++ + I++ T+ ++LL  PL  KQ  S   M N+QPKI EL
Sbjct: 45  YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 104

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +EK+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L   DP                     I P++ +L+ F+  K+S       +
Sbjct: 165 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 203

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I      +
Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNK 253


>gi|302390793|ref|YP_003826614.1| membrane protein insertase, YidC/Oxa1 family [Thermosediminibacter
           oceani DSM 16646]
 gi|302201421|gb|ADL08991.1| membrane protein insertase, YidC/Oxa1 family [Thermosediminibacter
           oceani DSM 16646]
          Length = 209

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 111/225 (49%), Gaps = 24/225 (10%)

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
            +  ++ + +    ++G+AI++ T  +KL+  P + +Q+ S   M+ I P   +L+EK+K
Sbjct: 7   VLKQILDFLFLYTKSYGVAIIVLTALIKLVLLPFSFQQFQSIKKMQEIAPLQKKLQEKYK 66

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               + L + +++LY+ + +NP+ GC P+L+Q P   A++ ++           + WI D
Sbjct: 67  NDKEK-LNRELLKLYQENKVNPMGGCLPLLIQFPFIIALFSLLQH--HNFGNEGFLWIAD 123

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQAMILNWM 523
           L A D T                    + P++ +++ ++  K+  P   D  Q+ +   M
Sbjct: 124 LGAPDRTF-------------------VLPLLAAVTTYVSSKIGMPQNPDNPQSSMNLIM 164

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH-GAEIGLI 567
             V  +    FP+GL +YW  SN+I I+QQ +IM+     +  + 
Sbjct: 165 SAVIGWMALKFPSGLALYWVVSNLIQILQQVIIMRSTASVKEEVK 209


>gi|253582576|ref|ZP_04859797.1| inner membrane protein oxaA [Fusobacterium varium ATCC 27725]
 gi|251835446|gb|EES63986.1| inner membrane protein oxaA [Fusobacterium varium ATCC 27725]
          Length = 205

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 61/215 (28%), Positives = 116/215 (53%), Gaps = 22/215 (10%)

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
            +  ++ + +NL GNFG+AI+  T+ +K++  PL  KQ  S  +MK +QP++D+++E++K
Sbjct: 11  IIESMLVFMHNLTGNFGLAIIGVTILMKIILLPLTLKQDKSMKSMKKLQPELDKIKEQYK 70

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               ++L +  ++LY+ H +NP  GC P+L+Q+P+ +A++ V+   + +     + W++ 
Sbjct: 71  G-DSKMLNQKTMELYQKHKVNPAGGCLPLLVQLPILWALFGVLRGGI-VPQDSTFLWMQ- 127

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L   DP                     I P++  +  F+Q K+     +     ++   P
Sbjct: 128 LVQPDPYY-------------------ILPVLNGVVSFVQQKVMGSSDNPQMKNMMYMFP 168

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           ++ VF     PAGL IYW  S++  ++QQ +IMK 
Sbjct: 169 IMMVFISYKMPAGLQIYWLTSSLAGVIQQYLIMKK 203


>gi|310644873|ref|YP_003949632.1| membrane protein insertase, yidc/oxa1 family [Paenibacillus
           polymyxa SC2]
 gi|309249824|gb|ADO59391.1| Membrane protein insertase, YidC/Oxa1 family [Paenibacillus
           polymyxa SC2]
          Length = 288

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 124/246 (50%), Gaps = 28/246 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           ++     W  ++       +  F     G +G+A+++  + V+ +  PL  KQ  S+  M
Sbjct: 39  DLANGSWWQRYVVYWFSYALDTFAQWFSGEYGLAVLILVIIVRTIILPLTLKQVRSSRAM 98

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + IQP++ E++ K+K +P   +Q+  ++L++ + +NP+AGC P+L+Q+P+F A+Y  I  
Sbjct: 99  QAIQPQLKEIQAKYKDTPE-RVQQETMKLFQENKVNPMAGCLPLLVQMPIFIALYNAIYY 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ----M 505
           +  +R    + W++ L   D                      I PI+ +++ FIQ    M
Sbjct: 158 NSALRD-HDFLWLQ-LGKPDHFF-------------------ILPILAAITTFIQTWMMM 196

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           KM+P P       +L   PV+ +F   +FP+ L +YW +SN+ +IVQ   + + +  +  
Sbjct: 197 KMNPTPQQGPMQFLLYVYPVLILFMSYNFPSALPLYWFFSNIYTIVQNYFLYRNND-KDA 255

Query: 566 LIDRLR 571
            +  ++
Sbjct: 256 ALANVK 261


>gi|313611878|gb|EFR86333.1| stage III sporulation protein J [Listeria monocytogenes FSL F2-208]
          Length = 277

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 115/230 (50%), Gaps = 27/230 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    + +  +     G++ + I++ T+ ++LL  PL  KQ  S   M N+QPKI EL
Sbjct: 35  YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 94

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +EK+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 95  QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 154

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L   DP                     I P++ +L+ F+  K+S       +
Sbjct: 155 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 193

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I      +
Sbjct: 194 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNK 243


>gi|261420019|ref|YP_003253701.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
           Y412MC61]
 gi|297530020|ref|YP_003671295.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
           C56-T3]
 gi|319766834|ref|YP_004132335.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
           Y412MC52]
 gi|261376476|gb|ACX79219.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
           Y412MC61]
 gi|297253272|gb|ADI26718.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
           C56-T3]
 gi|317111700|gb|ADU94192.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp.
           Y412MC52]
          Length = 249

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 125/245 (51%), Gaps = 27/245 (11%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
           +   P  E        YF+     +L++  +    N+GIAI++ T+ V+    PL  KQ+
Sbjct: 19  NRNEPINEHSQGIWNHYFVYPMSKLLLTLGHWFGDNYGIAIIVLTLIVRFCLLPLILKQF 78

Query: 384 VSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
            ++  M+ ++P++ +L+EK+K   P   + LQ+ M+QLY+ H +NP +GC P+L+Q+P+F
Sbjct: 79  RASLAMQKLRPELLKLQEKYKSKDPETQRKLQQEMMQLYQKHGVNPASGCLPVLIQMPIF 138

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            A+Y  IS + E++    + W++ L   DP                     I P++ +L+
Sbjct: 139 MALYYAISRTQEIKTHS-FLWVE-LGHRDPYF-------------------ILPVLAALT 177

Query: 501 MFIQMKMSPPPAD---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            FI +++SP  A+      AM+   MPV+     SS P+ L +YW      SI+Q  ++ 
Sbjct: 178 TFISLRLSPSMAEEQMPQMAMMSYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLILR 237

Query: 558 KMHGA 562
               A
Sbjct: 238 SQLKA 242


>gi|242032277|ref|XP_002463533.1| hypothetical protein SORBIDRAFT_01g001520 [Sorghum bicolor]
 gi|241917387|gb|EER90531.1| hypothetical protein SORBIDRAFT_01g001520 [Sorghum bicolor]
          Length = 470

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/199 (25%), Positives = 98/199 (49%), Gaps = 18/199 (9%)

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+++QP++  ++E++     + +Q    +LYK   ++PLAGC P L+ IPV+  +Y+ +S
Sbjct: 119 MRSLQPQVKAIQERYAG-DQERIQLETARLYKLSGVDPLAGCLPTLVTIPVWIGLYRALS 177

Query: 449 I-SLEMRHAPFWGWIKDLAAADPTN-------IFTLF----GILPFYLPGFMHVGIWPII 496
             + E      + WI  LA             I  LF    G  P      +   + P++
Sbjct: 178 NVANEGLLTEGFFWIPSLAGPTTIAARQNGQGISWLFPFTDGHPPLGWSDTLAYLVLPVL 237

Query: 497 MSLSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           + +S +I  ++  PP   D  Q     +  ++P++  +   S P+GL +YW  +N++S  
Sbjct: 238 LVISQYISTQVMQPPQSNDPSQQGAQAVTKFLPLLIGYFALSVPSGLGLYWLTNNILSTA 297

Query: 552 QQAVIMKMHGAEIGLIDRL 570
           QQ  + K+ GA+  + + +
Sbjct: 298 QQVWLQKLGGAKNPVKEYI 316


>gi|308071641|ref|YP_003873246.1| membrane protein oxaA 1 precursor [Paenibacillus polymyxa E681]
 gi|305860920|gb|ADM72708.1| Membrane protein oxaA 1 precursor [Paenibacillus polymyxa E681]
          Length = 288

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 127/246 (51%), Gaps = 28/246 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           ++     W  ++       +  F     G +G+A+++  + V+ +  PL  KQ  S+  M
Sbjct: 39  DLANGSFWQRYVVYWFSYALDTFAQWFSGEYGLAVLILVIIVRTIILPLTLKQVRSSKAM 98

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + IQP++ E++ K+K +P + +Q+  ++L++ + +NP+AGC P+++Q+P+F A+Y  I  
Sbjct: 99  QAIQPQLKEIQAKYKDTPEK-VQQETMKLFQENKVNPMAGCLPLVVQMPIFIALYNAIYY 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ----M 505
           +  +R    + W++ L   D                   H+ I PI+ +++ F+Q    M
Sbjct: 158 NSALRD-HDFLWLQ-LGKPD-------------------HLFILPILAAITTFVQTWMMM 196

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           KM+P P       +L   PV+ +F   +FP+ L +YW +SN+ +I+Q   + + +  +  
Sbjct: 197 KMNPTPQQGPMQFLLYVYPVLILFMSYNFPSALPLYWFYSNIYTIIQNYFLYR-NKDKEA 255

Query: 566 LIDRLR 571
            +  ++
Sbjct: 256 ALANVK 261


>gi|319651097|ref|ZP_08005231.1| OxaA-like protein [Bacillus sp. 2_A_57_CT2]
 gi|317397267|gb|EFV77971.1| OxaA-like protein [Bacillus sp. 2_A_57_CT2]
          Length = 250

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 30/252 (11%)

Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373
               +     ++  P       +   Y +      ++       G++G++I++ T+ ++L
Sbjct: 2   FVMALLSGCTEINQPITSESEGFWNEYIVYPLSLFIIKVAEFAGGSYGLSIIIVTIIIRL 61

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGC 430
           +  PL  KQ  S+  M+ IQP++ +LREK+        Q LQ+  + L++ H +NPLAGC
Sbjct: 62  VILPLMIKQTRSSKAMQAIQPEMQKLREKYSSKDQKTQQKLQQETMALFQKHGVNPLAGC 121

Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
           +P+++Q+P+    Y  I+ + E+ +   + W  DL + DP                   +
Sbjct: 122 FPLVIQMPILIGFYHAITRTREIAN-HNFLWF-DLGSPDP-------------------I 160

Query: 491 GIWPIIMSLSMFIQMKMSPPPADKG-----QAMILNW-MPVVFVFALSSFPAGLIIYWSW 544
            + P+I  ++ FIQ KM      +      Q  ++ + MP++ V    +FPA L +YW  
Sbjct: 161 YLLPLIAGVTTFIQQKMMMAGTQQTGQMAAQMKMMLYLMPIMIVIFAINFPAALSLYWVV 220

Query: 545 SNVISIVQQAVI 556
            N+  IVQ   I
Sbjct: 221 GNIFMIVQTYFI 232


>gi|297585590|ref|YP_003701370.1| YidC/Oxa1 family membrane protein insertase [Bacillus
           selenitireducens MLS10]
 gi|297144047|gb|ADI00805.1| membrane protein insertase, YidC/Oxa1 family [Bacillus
           selenitireducens MLS10]
          Length = 296

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 37/258 (14%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
            W  F   P+  LM+     + N +G+AI++ T+ +++L  PL  KQ  ST  M+ IQP+
Sbjct: 45  IWDPFFVYPLSWLMTTIAEFLNNSYGLAIIIVTIMLRILILPLMIKQTKSTKAMQAIQPQ 104

Query: 396 IDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS-- 450
           + EL++K+     +    LQ+  + L++ + +NPLAGC PI +Q+P+  A Y  I  +  
Sbjct: 105 MKELQQKYSAKDKKTQEKLQQETMALFQENKVNPLAGCLPIFIQMPILIAFYHAIIRTPQ 164

Query: 451 ---------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501
                    + M     + W + L +ADP                     I P++   + 
Sbjct: 165 INPNIDERYVGMYEPQQFLWFE-LGSADPYF-------------------ILPLVAGATT 204

Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           FIQ +M     +    ++L  MP++ +   + FP+ L +YW   N+  IVQ   I   + 
Sbjct: 205 FIQQRMMMVQDNPQMKVLLYVMPIMIMAFAAFFPSALALYWVIGNIFMIVQTQFITGPNV 264

Query: 562 AEIGLIDRLRSTFSKNYN 579
            +    ++ +    K   
Sbjct: 265 GKTE--EQQKEENKKKPQ 280


>gi|148658060|ref|YP_001278265.1| 60 kDa inner membrane insertion protein [Roseiflexus sp. RS-1]
 gi|148570170|gb|ABQ92315.1| 60 kDa inner membrane insertion protein [Roseiflexus sp. RS-1]
          Length = 330

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 55/256 (21%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
              +    + +  ++  FY   G+ G AI+L T+  +++  PL  K   S+  M+ +QP 
Sbjct: 1   MPIWLAFVEFLQQVLLTFYRWTGSAGFAIILFTIVARIVILPLTIKSLQSSRKMQELQPH 60

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI------ 449
           + EL+ K+    PQ LQ+  ++LY+ + +NP+ GC P+LLQ+P+F  +Y+ +        
Sbjct: 61  MKELQRKY-GKDPQKLQEETMRLYREYKVNPVGGCLPMLLQLPIFLGVYQAVINLTRVSP 119

Query: 450 -----SLEMR--------------------HAPFWGWIKDLAAADPTNIFTLFGILPFYL 484
                S  +R                     A  + W+ DL   DP              
Sbjct: 120 AEHAGSAMLRVLNEQGIAVGVASATLGQPQLAGSFLWLPDLGKTDPYY------------ 167

Query: 485 PGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQAMILNWM---PVVFVFALSSFPAGLII 540
                  I PI+  +   I   M +P   D  Q  ++  M   P+VF +    FP+G ++
Sbjct: 168 -------ILPILSVIFQLIVQLMATPRVQDPQQKAMMQSMLILPIVFGYIGFIFPSGAVL 220

Query: 541 YWSWSNVISIVQQAVI 556
           YW   +++SI+QQ VI
Sbjct: 221 YWVVGSILSIIQQYVI 236


>gi|116672711|ref|YP_833644.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24]
 gi|116612820|gb|ABK05544.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24]
          Length = 324

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 24/230 (10%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQK 413
             + ++I+   + ++    P+  KQ  +   M+ +QP + +L++K+K        Q + +
Sbjct: 37  WTWTLSIIGLVLVIRAALIPVFVKQIKAQRGMQLLQPDLKKLQDKYKGKTDQLSRQAMAQ 96

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD---LAAADP 470
             + +YK H  NP + C P+L+Q+P FFA+++V+S     R             +   D 
Sbjct: 97  EQMAMYKKHGTNPFSACLPMLIQMPFFFALFQVLSGITAARTKGAGIGAMSHEQVVQFDD 156

Query: 471 TNIFT-------LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP----------PAD 513
           ++IF        L G        ++   +  + M+ S FI  K              P  
Sbjct: 157 SSIFGATLSASLLHGGAGNQTAVWILSIVMILAMTASQFITQKQIMAKNMSEEAMASPFM 216

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           + Q M+L  +PVVF     +FP G++IYW+ +N+ ++ QQ  +++     
Sbjct: 217 RQQKMMLYILPVVFGVGGINFPIGVLIYWTTTNLWTMAQQFFVIRRMPTP 266


>gi|228949208|ref|ZP_04111476.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228810491|gb|EEM56844.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 255

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           I     ++  P           YF+     ++  +      N+G+AI++TT+ ++    P
Sbjct: 17  ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434
           L  KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI 
Sbjct: 77  LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQKMMQLYQKNGVNPLAGCLPIF 136

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ FA Y  I  + E+     + W  DL  ADP                     I P
Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 175

Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++ +++ FIQ K++       +   AM+L  MP++ +    +FPA L +YW   N+  I 
Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235

Query: 552 QQAVI 556
           Q  +I
Sbjct: 236 QMYLI 240


>gi|313640128|gb|EFS04745.1| stage III sporulation protein J [Listeria seeligeri FSL S4-171]
          Length = 287

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 27/230 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    +++  +     G++ I I++ T+ ++LL  PL  KQ  S   M N+QPKI EL
Sbjct: 45  YIVFPLSWVITWFSDLFGGSYAIGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKIKEL 104

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           + K+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 105 QTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIK-T 163

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L + DP                     I PI+ +L+ F   K+S       +
Sbjct: 164 DTFLWMQ-LGSPDPYF-------------------ILPIVAALTTFASSKISMMGQTQQN 203

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I      +
Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNK 253


>gi|302870728|ref|YP_003839365.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora
           aurantiaca ATCC 27029]
 gi|315506965|ref|YP_004085852.1| membrane protein insertase, yidc/oxa1 family [Micromonospora sp.
           L5]
 gi|302573587|gb|ADL49789.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora
           aurantiaca ATCC 27029]
 gi|315413584|gb|ADU11701.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora sp.
           L5]
          Length = 333

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 26/258 (10%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYVSTANM 389
             I W    + +    + +     +  N+     I+   V V+++ FP+  KQ  S   M
Sbjct: 9   YAISWILLTWHSAWDAIGVPVGAVIGTNWAWILAIVFLVVTVRVILFPVFVKQIKSQRAM 68

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QPK+ EL+EK K    + LQK M++LY+    NPL GC P+ LQIPVF  ++  +  
Sbjct: 69  QALQPKVKELQEKHKG-DRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHTLRR 127

Query: 450 -SLEMRHAPFWGWIKD--------------LAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
            S + +    +GW  D              ++    +    L  +        +  GI  
Sbjct: 128 LSPDNQGKTLYGWTVDQFNSASNATLFTAPISGKFGSTADELSRLGASTGTVKVVAGILV 187

Query: 495 IIMSLSMFIQMK----MSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSN 546
           IIM  + ++  +     +    D  Q M+   M    P+  + + + FP G+IIYW  +N
Sbjct: 188 IIMIATTYLTSRQMILKTGWAEDPQQRMVQRLMLYGIPLSLLISGAIFPIGVIIYWVTNN 247

Query: 547 VISIVQQAVIMKMHGAEI 564
           + ++ QQ  +++      
Sbjct: 248 LFTLGQQQWVLRKFPPPP 265


>gi|15616626|ref|NP_244932.1| OxaA-like protein precursor [Bacillus halodurans C-125]
 gi|38503226|sp|Q9RCA5|OXAA1_BACHD RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|5672644|dbj|BAA82682.1| 62%-identity [Bacillus halodurans]
 gi|10176689|dbj|BAB07783.1| stage III sporulation protein J [Bacillus halodurans C-125]
          Length = 257

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 67/242 (27%), Positives = 115/242 (47%), Gaps = 25/242 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            YF+    ++++ +     G+FG+AI++ T+ ++LL  PL  KQ  ST  M+ +QP++  
Sbjct: 38  SYFVYPLSWLMIYFANAFNGSFGLAIIVVTLLIRLLILPLMIKQLKSTRAMQALQPEMQA 97

Query: 399 LREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           LREK+    Q   Q LQ+  + L++ H +NPLAGC+P+L+Q+P+  A Y  I  + E+  
Sbjct: 98  LREKYSAKDQRTQQKLQQETMALFQKHGVNPLAGCFPVLIQMPILLAFYHAIMRTREI-G 156

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
              + W   L   DP                     + PII  ++ F+Q KM     +  
Sbjct: 157 DEHFLWFV-LNQPDPI--------------------LLPIIAGITTFLQQKMMMVTDNPQ 195

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
             ++L  MPV+ +      P+ L +YW   N+  I+Q   I   +     +   ++    
Sbjct: 196 MKVLLYVMPVMILVFAMFLPSSLALYWVIGNLFMILQTYFITGPNVGAKKVAADVKVGGK 255

Query: 576 KN 577
           K 
Sbjct: 256 KK 257


>gi|156530446|gb|ABU75304.1| chloroplast PPF-1 [Citrus trifoliata]
          Length = 452

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 27/271 (9%)

Query: 337 GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           GWF FI++ M  ++          ++  ++G AI+L TV VK+  FPL KKQ  ST  M+
Sbjct: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449
           N+QPKI  +++++  +  + +Q    +LY+   +NPLAGC P L  IPV+  +Y+ +S  
Sbjct: 162 NLQPKIKAIQQRYAGN-QERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-----------PIIMS 498
           + E      + WI  L+             + + LP                   P+++ 
Sbjct: 221 ANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLV 280

Query: 499 LSMFIQMKMSPPPAD-KGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           +S +    M PP  D   Q     +  ++P++  +   S P+GL IYW  +NV+S  QQ 
Sbjct: 281 VSQYAMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQV 340

Query: 555 VIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581
            + K+ GA+  + +     + +  +K   SQ
Sbjct: 341 WLRKLGGAKPVVTENASEIITAGRAKRSVSQ 371


>gi|156741411|ref|YP_001431540.1| 60 kDa inner membrane insertion protein [Roseiflexus castenholzii
           DSM 13941]
 gi|156232739|gb|ABU57522.1| 60 kDa inner membrane insertion protein [Roseiflexus castenholzii
           DSM 13941]
          Length = 345

 Score =  135 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 56/257 (21%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
              +    + +  ++  FY   G+ G+AI+L T+  +LL  PL  K   S+  M+ +QP 
Sbjct: 1   MPVWLAFVEFLQQVLLTFYAWTGSAGLAIILFTIVARLLILPLTIKSLQSSRKMQELQPH 60

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI------ 449
           + EL+ K+    PQ LQ+  ++LY+ + +NP+ GC P+LLQ+P+F  +Y+ +        
Sbjct: 61  MKELQRKY-GKDPQKLQEETMRLYREYKVNPVGGCLPMLLQLPIFLGVYQAVINLTRVSP 119

Query: 450 -----SLEMR---------------------HAPFWGWIKDLAAADPTNIFTLFGILPFY 483
                S  +R                      A  + W+ DL   DP             
Sbjct: 120 AEHAGSAMLRVLNEQGIAFSTATTATLGQPQLAGSFLWLPDLGKTDPYY----------- 168

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQAMILNWM---PVVFVFALSSFPAGLI 539
                   I PI+  +   I   M +P   D  Q  ++  M   P+VF +    FP+G +
Sbjct: 169 --------ILPILSVIFQLIVQLMATPRIQDPQQKAMMQSMLILPIVFGYIGFIFPSGAV 220

Query: 540 IYWSWSNVISIVQQAVI 556
           +YW   +++SI+QQ VI
Sbjct: 221 LYWVVGSILSIIQQYVI 237


>gi|150389948|ref|YP_001319997.1| 60 kDa inner membrane insertion protein [Alkaliphilus
           metalliredigens QYMF]
 gi|149949810|gb|ABR48338.1| 60 kDa inner membrane insertion protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 217

 Score =  135 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 73/231 (31%), Positives = 118/231 (51%), Gaps = 31/231 (13%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
             F+ +P+  L+   ++++GN+GIAI++ TV VKL   PL  KQ  S   M+ IQP I E
Sbjct: 1   MNFLTQPLGALLKIIFDVIGNYGIAIIVFTVLVKLAMVPLTMKQTKSMKKMQEIQPMIKE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI------SLE 452
           L+E+ K    Q+  K +++LYK +N++P  GC P+L+Q P+   ++ V+        +LE
Sbjct: 61  LQEQHKDDKEQMNIK-VMELYKEYNVSPFGGCLPLLIQFPIIIGLFTVLREPMDYGFTLE 119

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           +  A  + WI +LA ADP                     I P++  L+ ++         
Sbjct: 120 VIQAG-FLWIPNLAEADPW--------------------ILPLLAGLTTYLSSISMAATG 158

Query: 513 ---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
              D  Q ++  + P++  +   SFPAGL +YW  SN+    QQ VI K +
Sbjct: 159 NKKDPTQVIMKYFFPIMIFWWGRSFPAGLTLYWVISNLFQAGQQIVINKPY 209


>gi|91228356|ref|ZP_01262284.1| putative inner membrane protein translocase component YidC [Vibrio
           alginolyticus 12G01]
 gi|91188116|gb|EAS74420.1| putative inner membrane protein translocase component YidC [Vibrio
           alginolyticus 12G01]
          Length = 320

 Score =  135 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 91/286 (31%), Gaps = 13/286 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + I L+++    +Q + V    E    E+    +        +    V    
Sbjct: 1   MDSQRN-ILLIGLALVSFLLFQQWQVAKNPEPQAVEQAQSSSTLPAPSFADELDPVPGQQ 59

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           +A A      + +    L  SI+  G      NL  Y  ++ S+   V L       + +
Sbjct: 60  QASA----KTITVTTDVLTLSIDTVGGDVVHANLNEYSAELDSSDSFVLL--KDAQGHQF 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176
            A+   V          +   +N+ + +        +L     F        +  I    
Sbjct: 114 IAQSGLVGPQGIDLSSTNRPHYNVSADRFTMADGQDELRVPMTFTANGIEYTKTYIFKRG 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   V NNS +   F     + ++      + T     G      D    +  + 
Sbjct: 174 SYALNVEYDVVNNSGNNATFGMYAHLRQNLMDDGGSITMPTYRGGAYSTEDTRYKKYSFD 233

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
           D++  ++S        W  +   Y+A+ +IP  E   +   + + +
Sbjct: 234 DMQDRNLSLNLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGN 279


>gi|9886727|emb|CAC04249.1| PPF-1 protein [Pisum sativum]
          Length = 442

 Score =  135 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 83/348 (23%), Positives = 146/348 (41%), Gaps = 35/348 (10%)

Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327
            T   S  +  S    R   K   +   + P +S++ +  L         + +   D  +
Sbjct: 13  GTPLPSLHRTFSPNRTRLFTKVQFSFHQLPPIQSVSHSVDLSGIFARAEGLLYTLADATV 72

Query: 328 PRFEMLIDW-------GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLL 374
                           GWF FI+  M  ++          ++  ++G AI+L T  VK  
Sbjct: 73  AADAAASTDVAAQKNGGWFGFISDGMEFVLKVLKGGLSSVHVPYSYGFAIILLTGIVKAA 132

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434
             PL K+Q  ST  M+N QPKI  ++E++  +  + +Q    +LY    +NPLAGC P L
Sbjct: 133 TLPLTKQQVESTLAMQNPQPKIKAIQERYAGN-QERIQLETSRLYTQAGVNPLAGCLPTL 191

Query: 435 LQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPF 482
             IPV+  +Y+ +S  + E      + WI  L            + I  LF    G  P 
Sbjct: 192 ATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPL 251

Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMS--PPPADKGQAM---ILNWMPVVFVFALSSFPAG 537
                    + P+++ +S ++ M++   P   D  Q     I  ++P++  +   S P+G
Sbjct: 252 GWYDTAAYLVLPVLLIVSQYVSMEIMKPPQTNDPNQKNTLLIFKFLPLMIGYFSLSVPSG 311

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581
           L IYW  +NV+S   +  + K+ GA+  + +     + +  +K   S+
Sbjct: 312 LTIYWFTNNVLSTAHKVWLRKLGGAKPAVNENAGGIITAGQAKRSASK 359


>gi|332971199|gb|EGK10162.1| stage III sporulation protein J [Desmospora sp. 8437]
          Length = 261

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 66/226 (29%), Positives = 121/226 (53%), Gaps = 22/226 (9%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W  +   P+  L+ +F +++G++G+AI+  T+ ++L+  PL  KQ  S+  M+ +QP++ 
Sbjct: 56  WEKYFVFPLQQLLDFFNDVLGSWGLAILAATILIRLVVLPLTLKQMKSSRAMQVLQPEMK 115

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L+EK+K +  Q LQ+  ++L++ HN+NPLAGC P+L+Q+P+  A Y+ I     +    
Sbjct: 116 KLQEKYKNN-QQKLQEETMKLFQKHNVNPLAGCLPMLIQLPILIAFYQAIMREPTIA-KS 173

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + W++ L   DP                     I P++ +L+ ++Q  +     +  Q 
Sbjct: 174 SFLWMQ-LGEQDPYY-------------------ILPLLAALTTYLQSVVMGMGDNPQQR 213

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             L  MPV+       FPA L +YW +SN+ ++VQ   I   + A+
Sbjct: 214 AFLFIMPVMIFVLAFQFPAALPLYWIYSNLFTMVQYYFIGDKYKAK 259


>gi|213865391|ref|ZP_03387510.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           M223]
          Length = 110

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 20/114 (17%)

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
           ++  S+E+RHAPF  WI DL+A DP                     I PI+M ++MF   
Sbjct: 1   MLMGSIELRHAPFALWIHDLSAQDPYY-------------------ILPILMGVTMFFIQ 41

Query: 506 KMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           KMSP    D  Q  I+ +MPV+F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 42  KMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 95


>gi|297572341|ref|YP_003698115.1| membrane protein insertase, YidC/Oxa1 family [Arcanobacterium
           haemolyticum DSM 20595]
 gi|296932688|gb|ADH93496.1| membrane protein insertase, YidC/Oxa1 family [Arcanobacterium
           haemolyticum DSM 20595]
          Length = 377

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 114/256 (44%), Gaps = 30/256 (11%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W  +    +   +         + ++I+  T+ +++L  PL  KQ  +    + IQP++
Sbjct: 13  SWIMYGIHSVLTALGLSSGSGAAWVLSIVGLTIVIRILIIPLFNKQIRAMRMGQEIQPEV 72

Query: 397 DELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---- 448
            +L++K+K        Q  Q+ ++ LY+    +P A C P+L+Q+P+FFA+++++     
Sbjct: 73  QKLQKKYKGRTDAVSKQRQQEELMALYRERGTSPFASCLPLLIQMPIFFALFRLLYAVDP 132

Query: 449 ---------ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
                     +++   A          A   +++ T  G  P      +   I  ++M  
Sbjct: 133 ISKGQMGTIGAVDKTVAHEIANSTLFGAPLSSSLGTA-GTFPLPTNVRIVAIILIVLMMA 191

Query: 500 SMFIQMKMSPP------------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
           ++F   KM               PA K Q M+L  MP++++F   +F  G+++YW  SN+
Sbjct: 192 TLFFSQKMIMTKNMPESAQDPDNPAYKMQKMMLYGMPIIYIFTGFAFQVGVLVYWLTSNL 251

Query: 548 ISIVQQAVIMKMHGAE 563
            +I QQ  ++  +   
Sbjct: 252 WNIGQQYWLITYNPTP 267


>gi|304437936|ref|ZP_07397882.1| stage III sporulation protein J [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304369076|gb|EFM22755.1| stage III sporulation protein J [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 224

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 21/186 (11%)

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433
           + +PL  KQ  S   M++IQPK+ +++EK+ +  PQ+LQ+   +L++   +NPLAGC P+
Sbjct: 49  VTYPLTVKQVKSMKAMQDIQPKMKKIQEKY-KHDPQMLQQKTGELFREAGVNPLAGCLPL 107

Query: 434 LLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           L+Q+P+   +Y  +   +     A  + W+  ++  DP                     I
Sbjct: 108 LVQMPILMGMYYALFNFTFPSAEAAAFFWLPSMSEPDPYY-------------------I 148

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            P++ + + F+Q KM+         +++  MP+   +   +FP+GL++YW   NV+ I Q
Sbjct: 149 LPVLSAATTFLQQKMTSSEMTGQMKIMMTVMPLFIGWISLTFPSGLVLYWVTMNVVQIAQ 208

Query: 553 QAVIMK 558
           Q  + +
Sbjct: 209 QWWMYR 214


>gi|317131004|ref|YP_004097286.1| membrane protein insertase, YidC/Oxa1 family [Bacillus
           cellulosilyticus DSM 2522]
 gi|315475952|gb|ADU32555.1| membrane protein insertase, YidC/Oxa1 family [Bacillus
           cellulosilyticus DSM 2522]
          Length = 268

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 74/224 (33%), Positives = 109/224 (48%), Gaps = 13/224 (5%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           W  F   P+  LM    N+  N FGI+I++ T+ +++L  PL  KQ  ST  M+ IQP++
Sbjct: 36  WDSFFVYPLSWLMIEIANIFNNSFGISIIIVTLLIRILILPLMIKQTKSTKAMQAIQPEM 95

Query: 397 DELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
            ELREK+     Q  QK     + L++ H +NPLAGC PIL+Q+P+  A Y  I  +   
Sbjct: 96  KELREKYSAKDQQTQQKLQQETMALFQKHGVNPLAGCLPILVQMPILIAFYHAIIRT--- 152

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
              P+     D+A             L F L       I P+I   + FIQ KM     +
Sbjct: 153 ---PYINPEVDIA---NYGHLDPQVFLWFELGHADPYYILPLIAGATTFIQQKMMMVTDN 206

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
               M++  MP++ +   + FP+ L +YW   N+  IVQ   I 
Sbjct: 207 PQMRMMMYIMPLMIMAFAAFFPSALALYWVIGNLFMIVQTYFIT 250


>gi|255581095|ref|XP_002531362.1| Inner membrane protein PPF-1, chloroplast precursor, putative
           [Ricinus communis]
 gi|223529022|gb|EEF31010.1| Inner membrane protein PPF-1, chloroplast precursor, putative
           [Ricinus communis]
          Length = 449

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 82/356 (23%), Positives = 150/356 (42%), Gaps = 34/356 (9%)

Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318
           +    +PS  +    Q   L         K   +   I P   + + +F    ++    +
Sbjct: 11  FIGAPLPSSSSRHGLQHSLLPSRRFISTTKVKFSLHEIPPITHLDSVDFNSIVSRAESLL 70

Query: 319 HHYEKDLAIPRFEMLIDW------GWFYFIAKPMFMLMSYFY------NLVGNFGIAIML 366
           +               D       GWF FI++ M  ++          ++  ++G AI+L
Sbjct: 71  YTLADAAVAVDSSAATDTAVQKNNGWFGFISEGMEFVLKVLKDGLSSVHVPYSYGFAIIL 130

Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426
            TV VK+   PL K+Q  ST  M+N+QPKI  +++++  +  + +Q    +LY+   +NP
Sbjct: 131 LTVIVKIATLPLTKQQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLETSRLYRQAGVNP 189

Query: 427 LAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           LAGC+P L  IPV+  +Y+ +S  + E      + WI  L              + +  P
Sbjct: 190 LAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLFP 249

Query: 486 GFMHVGIW-----------PIIMSLSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFVF 529
                              P+++ +S ++ M++  PP   D  Q     +  ++P++  +
Sbjct: 250 FVDGHPPLGWYDTAAYLVLPVLLVVSQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGY 309

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581
              S P+GL IYW  +NV+S  QQ  + K+ GA+  +       + +  +K   SQ
Sbjct: 310 FSLSVPSGLSIYWFVNNVLSTAQQVWLRKLGGAKPVVDQNASGIITAGRAKRSASQ 365


>gi|284049399|ref|YP_003399738.1| membrane protein insertase, YidC/Oxa1 family [Acidaminococcus
           fermentans DSM 20731]
 gi|283953620|gb|ADB48423.1| membrane protein insertase, YidC/Oxa1 family [Acidaminococcus
           fermentans DSM 20731]
          Length = 207

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 67/203 (33%), Positives = 109/203 (53%), Gaps = 22/203 (10%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            ++G+AI++ T+ +KL+  PL  KQ  ST  M  IQPK+ EL+ ++K      L + M +
Sbjct: 25  PSYGLAIIIMTILIKLILSPLTAKQIASTRAMSRIQPKMKELQARYKDDKVT-LNQKMSE 83

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK+  +NPLAGC P+L+Q+P+   I+  I    +      + W++ +A  DP       
Sbjct: 84  LYKSEGVNPLAGCLPLLIQMPIMIGIFYGIR-DFQYAGPSSFLWMQSIADPDPYY----- 137

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMPVVFVFALSSFPA 536
                         I PI+ +L+ FIQ K + PP+D  Q  I+  +MP+   +    FPA
Sbjct: 138 --------------ILPILSALTTFIQSKQTMPPSDNPQGKIMLYFMPLFIGYISLKFPA 183

Query: 537 GLIIYWSWSNVISIVQQAVIMKM 559
           GL++YW   N++ I QQ ++ + 
Sbjct: 184 GLVLYWVVMNIMQIGQQFLLDRK 206


>gi|158321892|ref|YP_001514399.1| 60 kDa inner membrane insertion protein [Alkaliphilus oremlandii
           OhILAs]
 gi|158142091|gb|ABW20403.1| 60 kDa inner membrane insertion protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 220

 Score =  134 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 70/234 (29%), Positives = 117/234 (50%), Gaps = 32/234 (13%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              +A+P   L+   ++L  N+G++I+L T+  KLL  PL  KQ  S   M+ IQPK+ +
Sbjct: 1   MNALARPFGALLKLIFDLTNNYGLSIILFTIVTKLLTLPLTIKQNKSMKEMQEIQPKLKK 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS---LEMRH 455
           L+EK+K  P Q+  K  ++LYK HN++P  GC P+L+Q P+   ++  +      +    
Sbjct: 61  LQEKYKNDPEQLNIK-TMELYKEHNVSPFGGCLPLLIQFPIIIGLFAAVREPGTYVFGSQ 119

Query: 456 APF------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--MKM 507
           A +      + W+ +L  ADP                     I PI+  L+ ++      
Sbjct: 120 AAYEAINTSFLWLPNLTVADPW--------------------ILPILAGLTTYLSSATLT 159

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           S   AD+ Q ++  +MPV+  +   +FPAGL +YW  SNV   +QQ ++ +   
Sbjct: 160 SGKSADQTQKIMTYFMPVMIFWWGKTFPAGLTLYWFVSNVFQTIQQLILRRPQK 213


>gi|148982293|ref|ZP_01816700.1| putative inner membrane protein translocase component YidC
           [Vibrionales bacterium SWAT-3]
 gi|145960558|gb|EDK25915.1| putative inner membrane protein translocase component YidC
           [Vibrionales bacterium SWAT-3]
          Length = 291

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 89/286 (31%), Gaps = 13/286 (4%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL+++    +Q + V         E+    +        +         
Sbjct: 1   MDSQRN-ILLIALALVSFLLFQQWNVAKNPAPQAVEQAQSGSTLPAPSYADDLDPAPG-- 57

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
             Q  S +  + +    L  SI+  G      NL  Y  +  S    V L   +   + +
Sbjct: 58  --QVASSAKTITVTTDVLTLSIDTVGGDVVTANLNDYSAEFDSEESFVLL--KNEPGHQF 113

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176
            A+   V          +   + + +             I + ++       +  I    
Sbjct: 114 IAQSGLVGPQGIDLSSTNRPSYTVSADSFTLADGQDELRIPMTYQANGLDYTKTFILKRG 173

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235
            Y   +   V NNS +   F     + ++      + T     G      D    +  + 
Sbjct: 174 SYAIDVEYDVVNNSGNNATFGMYAHLRQNVMDDGGSLTMPTYRGGAYSTEDTRYKKYSFD 233

Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280
           D++  ++S    +   W  +   Y+AS +IP  E   +   + + +
Sbjct: 234 DMQDRNLSLNLANGQGWAAMIQHYFASAWIPRDEAGSNLYTRVIGN 279


>gi|291294533|ref|YP_003505931.1| 60 kDa inner membrane insertion protein [Meiothermus ruber DSM
           1279]
 gi|290469492|gb|ADD26911.1| 60 kDa inner membrane insertion protein [Meiothermus ruber DSM
           1279]
          Length = 459

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 82/323 (25%), Positives = 142/323 (43%), Gaps = 45/323 (13%)

Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309
            W       +A    P   T                  + +   I  +   + +    ++
Sbjct: 179 GWQTHKASGFAMFIRPQTPTPITLT-------------QLNGAGIAEISVPAGSLNLKVY 225

Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTT 368
            GA E   +              +     +  I+  +  L+   + LVG   + AI+L T
Sbjct: 226 GGANELVRLSVE----NFYELPGVFQPNIWGQISLGLLWLLEEAHRLVGGSWVLAIVLVT 281

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428
           + ++LL +PL  +QY S A M+ IQP + +++EK+K +  +  Q+ M++LY+ H INPL 
Sbjct: 282 ILIRLLMWPLMHQQYKSMAEMQKIQPLLKKIQEKYKDNKEK-QQEEMMKLYQEHKINPLG 340

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           GC+P+LLQ+P+ F +YK I +  E      + WI DLA  DP                  
Sbjct: 341 GCFPLLLQMPILFLMYK-IMVGYEFGQ--GFLWIPDLALPDP------------------ 379

Query: 489 HVGIWPIIMSLSMFIQMKMSPP-PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
            + + P+I    +FI   ++     D  +  I     +VF F L SFPAG+ +Y+++  +
Sbjct: 380 -IYVLPLIYIAVIFISTLLTSAGNKDAIRQGI--IFNLVFAFILFSFPAGVNLYYTFFTI 436

Query: 548 ISIVQQAVIMKMHGA-EIGLIDR 569
           + I QQ  I K  G  +  ++ +
Sbjct: 437 LGIGQQFYINKQLGISKPSMLAK 459


>gi|269122721|ref|YP_003310898.1| hypothetical protein Sterm_4135 [Sebaldella termitidis ATCC 33386]
 gi|268616599|gb|ACZ10967.1| 60 kDa inner membrane insertion protein [Sebaldella termitidis ATCC
           33386]
          Length = 219

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 62/217 (28%), Positives = 117/217 (53%), Gaps = 12/217 (5%)

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
                +       GN+GI I+L TV ++++  PL  KQ  S   M++IQP++D+LREK+K
Sbjct: 9   VFLTTLKKLSEFTGNYGIGIILLTVLIRVIILPLTIKQEKSMKKMRDIQPEVDKLREKYK 68

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
            +P Q +Q  M ++YK + +NP+AGC P+ +Q+ +F  +++V++ +  + +   + W  +
Sbjct: 69  DNP-QEMQIKMQEIYKKNQVNPMAGCLPLFVQMCIFITLFRVLNDANSIPNDATFLWF-N 126

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQAMILN 521
           L   D        G+       F  + I+P++ ++  F Q KM              +L 
Sbjct: 127 LKQPDALVKLPFTGM-------FSAINIFPLLNTVVTFFQQKMMSTGTQDSNPQMKTMLY 179

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            +P+V +    + P+G+ +YW  S++++++QQ  IMK
Sbjct: 180 TLPLVILVMTYNMPSGVSLYWFTSSLLAVIQQFFIMK 216


>gi|323467509|gb|ADX71196.1| Preprotein translocase subunit YidC [Lactobacillus helveticus H10]
          Length = 303

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 56/264 (21%), Positives = 110/264 (41%), Gaps = 21/264 (7%)

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379
                   P      +W   + +      ++     +  ++G AI++ T+ ++++  PL 
Sbjct: 44  QGTNGHVAPVSHNSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIIRVILLPLN 103

Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQ 436
                ST  M+ IQP+I+ELR+K+     +     Q+   +LYK   +NP  GC P+L+Q
Sbjct: 104 AISIRSTTKMQGIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQ 163

Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           +PV +A+Y  I  + ++     + W+ DL+  DP  I  +  +               + 
Sbjct: 164 LPVMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAM---------------VF 206

Query: 497 MSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
             LS +I    +P  A  G   ++ + M ++       F A + +YW  SN+   VQ  +
Sbjct: 207 TFLSTYISQLATPKSAQNGMTKVMTYGMAIMVGVMALKFQAAITLYWVISNLFQAVQTFI 266

Query: 556 IMKMHGAEIGLIDRLRSTFSKNYN 579
           +      +     +  +   +   
Sbjct: 267 LQNPIKFKKEQEAKAEAERERKRK 290


>gi|258646360|ref|ZP_05733829.1| stage III sporulation protein J [Dialister invisus DSM 15470]
 gi|260403758|gb|EEW97305.1| stage III sporulation protein J [Dialister invisus DSM 15470]
          Length = 306

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 26/256 (10%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPL 378
                 F++ +       IA  M + +   Y         N+ IAI++ T+ +K L  PL
Sbjct: 6   GGGGSDFQIPVLSAIVGMIADLMRIGLQICYEFTSGLGFPNYVIAIVVLTILIKTLLLPL 65

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438
           A KQ  S   M+ IQP+I ++++K++  P  + ++ M +LYK HN +P+AGC P+L+Q+P
Sbjct: 66  AVKQIRSMKAMQAIQPEIQKIQKKYRNDPAMM-RQEMGRLYKEHNASPMAGCLPLLIQMP 124

Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
              A+Y  I           + WI+ LAA D T                    I P++ +
Sbjct: 125 FLIAMYYAIQGFSYDPLHAGFLWIESLAAEDGTY-------------------ILPVLSA 165

Query: 499 LSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            S F+    + P    G    + +M P++  +    FP+GL+IYW  SN+    QQ ++ 
Sbjct: 166 ASTFLVSWQTTPKDAPGNQKTMLFMMPLMIGWMSLHFPSGLVIYWVVSNIYQFFQQLIMF 225

Query: 558 KMHGAEIGLIDRLRST 573
           +    +  +    +  
Sbjct: 226 RGEKGKEMINGPSKKG 241


>gi|238926593|ref|ZP_04658353.1| sporulation associated-membrane protein [Selenomonas flueggei ATCC
           43531]
 gi|238885539|gb|EEQ49177.1| sporulation associated-membrane protein [Selenomonas flueggei ATCC
           43531]
          Length = 224

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 21/207 (10%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           + ++G  I+L T+ +KL+ +PL  KQ  S   M+ IQPK+ +++EK+ +S PQ+LQ+   
Sbjct: 32  LESYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEKY-KSDPQMLQQKTG 90

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFT 475
           +L++   +NPLAGC P+L+Q+P+   +Y  +   +     A  + W+  ++  DP     
Sbjct: 91  ELFREAGVNPLAGCLPLLVQMPILMGMYYALFNFTFPSAEAAAFFWLPSMSEPDPYY--- 147

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
                           I P++ + + F+Q KM+         +++  MP+   +   +FP
Sbjct: 148 ----------------ILPVLSAATTFLQQKMTSSEMTGQMKIMMTVMPLFIGWISLTFP 191

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGA 562
           +GL++YW   NV+ I+QQ  + +  G 
Sbjct: 192 SGLVLYWVTMNVVQIIQQWWMYRSEGP 218


>gi|145597099|ref|YP_001161396.1| 60 kDa inner membrane insertion protein [Salinispora tropica
           CNB-440]
 gi|145306436|gb|ABP57018.1| 60 kDa inner membrane insertion protein [Salinispora tropica
           CNB-440]
          Length = 370

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 64/279 (22%), Positives = 113/279 (40%), Gaps = 32/279 (11%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYVSTANM 389
             I W    +      + +     L  N+     I+   V V+++ FP+  KQ  S   M
Sbjct: 7   YTISWILLRWHQVWDVIGVPEGAVLGTNWAWILAIIFLVVTVRVILFPVFVKQIKSQRAM 66

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP++  L+EK K    + LQK M++LY+    NPL GC P+ LQIPVF  ++ V+  
Sbjct: 67  QALQPQVKALQEKHKG-DRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHVLRR 125

Query: 450 ---SLEMRHAPFWGWIKDLAAADPTNIFTLF----------------GILPFYLPGFMHV 490
              + +      +GW  D    D  ++  LF                 +        +  
Sbjct: 126 LNPNKDESGKTLYGWTVD--QFDSVSVAKLFTAPIAGKFGSSPEELAALGADGTTVKIMA 183

Query: 491 GIWPIIMSLSMFIQMK----MSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYW 542
           GI  ++M  + ++  +     +    D  Q MI   M    P   + + + FP G+IIYW
Sbjct: 184 GILVLLMMGTTYLTSRQMILKTGWAEDPQQRMIQRLMLYGIPASLLISGAIFPIGVIIYW 243

Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +N+ ++ QQ  +++              T      ++
Sbjct: 244 VTNNLFTLAQQQWVLRKFPPPPSAKSGTTGTRGAVQPAK 282


>gi|625665|pir||C36925 cbbR 3'-region hypothetical protein - Xanthobacter flavus
           (fragment)
          Length = 106

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 44/100 (44%), Positives = 70/100 (70%), Gaps = 2/100 (2%)

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
           +  ++ +G WP+IM ++M++QMK++P P D  Q MI NWMP++F F L+ F AGL+IYW+
Sbjct: 6   IGSYLLLGAWPLIMGVTMWVQMKLNPAPPDPTQQMIFNWMPIIFTFMLAHFAAGLVIYWA 65

Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRS--TFSKNYNSQ 581
           W+N +S+ QQAVIM+ +G +I L D ++    F K   ++
Sbjct: 66  WNNTLSVTQQAVIMRRNGVKIELWDNIKGALGFGKKSAAK 105


>gi|238018226|ref|ZP_04598652.1| hypothetical protein VEIDISOL_00050 [Veillonella dispar ATCC 17748]
 gi|237864697|gb|EEP65987.1| hypothetical protein VEIDISOL_00050 [Veillonella dispar ATCC 17748]
          Length = 222

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 67/211 (31%), Positives = 105/211 (49%), Gaps = 24/211 (11%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
             ++G+AI+L T+ +K +  PL  KQ  S   M+ +QP++ EL++K+K  P + LQ  M 
Sbjct: 31  YPSYGVAIILLTIVIKAILAPLTVKQIKSMKAMQELQPRMKELQDKYKNDPAK-LQAEMG 89

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            LYK   +NPLAGC P+L+Q+P   AI+  +      ++   + W+  L   DP      
Sbjct: 90  ALYKEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYDQNYVQFLWLPSLGEPDPMY---- 145

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQAMILN-WMPVVFVFALS 532
                          I P++ + S +I  K +   A      Q  I+  +MP+   +   
Sbjct: 146 ---------------ILPVLSAASTWIMSKQTSSGASGAAAQQQKIMTIFMPLFIGYISL 190

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           +FP+GL+IYW  SNV   VQQ  I K   A+
Sbjct: 191 NFPSGLVIYWIVSNVFQFVQQHFIYKGLEAK 221


>gi|261410107|ref|YP_003246348.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus sp.
           Y412MC10]
 gi|329925107|ref|ZP_08280051.1| putative stage III sporulation protein J [Paenibacillus sp. HGF5]
 gi|261286570|gb|ACX68541.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus sp.
           Y412MC10]
 gi|328940226|gb|EGG36558.1| putative stage III sporulation protein J [Paenibacillus sp. HGF5]
          Length = 296

 Score =  133 bits (334), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 112/228 (49%), Gaps = 26/228 (11%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              +    + L ++     G +G+++++  + V+ L  PL  KQ  S+  M+ IQP+I +
Sbjct: 48  SNVVYYFTWALDTFATWFNGEYGLSVLVMVLIVRTLILPLTLKQVRSSKAMQAIQPEIQK 107

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +REK+K  P + +Q   ++L++ + +NP+AGC P+++Q+P+F A+Y  I  +  +R    
Sbjct: 108 IREKYKDQPEK-VQMETMKLFQENKVNPMAGCLPLIVQMPIFIALYHSIYYNNLLRD-HE 165

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W++ L   D                      I P++ + + + Q KM        Q  
Sbjct: 166 FLWLQ-LGQPDKLF-------------------ILPVLAAATTYFQTKMMMKMNPSPQMG 205

Query: 519 ILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           ++ +M    P++       FP+ L +YW +SN+ +IVQ   + + +  
Sbjct: 206 MMQFMLFVYPILIFVMSFQFPSALPLYWFYSNLYTIVQNYFLYRNNDK 253


>gi|309789712|ref|ZP_07684292.1| hypothetical protein OSCT_0243 [Oscillochloris trichoides DG6]
 gi|308228198|gb|EFO81846.1| hypothetical protein OSCT_0243 [Oscillochloris trichoides DG6]
          Length = 348

 Score =  133 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 66/236 (27%), Positives = 116/236 (49%), Gaps = 18/236 (7%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
             +      +  ++ +F    G+  + I++ T+  +L+  PL      S+  M+ IQP I
Sbjct: 11  QIWGGFVGLLEQILLWFSTTTGSVALGIVIFTICARLIILPLTLSSLRSSRQMQQIQPLI 70

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMR 454
            EL+ K+     Q LQ+  ++LY+ + INP+ GC P+LLQ+P+FF +Y+ +     +E R
Sbjct: 71  KELQRKY-GKDQQKLQEETLKLYRDYKINPVGGCLPVLLQLPIFFGVYQAVYHLMVVEQR 129

Query: 455 HAPFWGWIKDLAAADPTNIFT--LFGILPFYLPGFMHVG---------IWPIIMSLSMFI 503
                G    +   D   +F+  LFGI+      F   G         + PI+  L   +
Sbjct: 130 VNLSAGAKAAMENPDVVALFSEKLFGIIDLGRTAFGPHGSGFAEPIYFVLPILSILLQVL 189

Query: 504 QMKM-SPPPADKGQAMI---LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           Q  M +P   D  Q  +   + +MP+VF +   +FP+G ++YW  S+++ +VQQ  
Sbjct: 190 QTVMATPRVQDPQQKAMTQAMMFMPLVFGYIAFTFPSGAVLYWVVSSLVGVVQQYF 245


>gi|134301155|ref|YP_001114651.1| 60 kDa inner membrane insertion protein [Desulfotomaculum reducens
           MI-1]
 gi|134053855|gb|ABO51826.1| protein translocase subunit yidC [Desulfotomaculum reducens MI-1]
          Length = 229

 Score =  133 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 26/229 (11%)

Query: 336 WGWFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           +GWF  I   M  LM++ Y         ++ +AI+L T+F+K++ +PL+KKQ  S   M+
Sbjct: 2   FGWFDAIVDGMTALMNWLYGFTVSFGFPSYALAIILLTIFIKVVLYPLSKKQMHSMVMMQ 61

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449
            + P+I  +++K+K   PQ++Q+ +++LYK HN+NP+AGC P+L+Q+P+  A+Y+ +   
Sbjct: 62  KLAPEIKAIQDKYKNKDPQMMQQKIMELYKEHNVNPMAGCLPLLVQMPILIALYRALYAF 121

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
             +      + W++ L+           G +P             ++ + + ++Q K++ 
Sbjct: 122 PFKNPDHAHFFWVESLSK---------TGDIP-----------LALLAAATTYLQSKLTT 161

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              D+ Q  +L  MP+   +   + PAGL +YW   N +  +QQ +I K
Sbjct: 162 NTQDQTQKTMLYTMPLFIGWIAHTVPAGLALYWVVFNTVGAIQQWIINK 210


>gi|325965292|ref|YP_004243198.1| preprotein translocase subunit YidC [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323471379|gb|ADX75064.1| preprotein translocase subunit YidC [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 326

 Score =  133 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 26/232 (11%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQK 413
             + ++I+   + ++    P+  KQ  +   M+ +QP + +L++K+K        Q + +
Sbjct: 37  WTWTLSIIGLVLVIRAALIPVFVKQIKAQRGMQLLQPDLKKLQDKYKGKTDQLSRQAMAQ 96

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKD--LAAADP 470
             + +YK H  NP + C P+L+Q+P FFA++ V+S  S   R     G +    +   D 
Sbjct: 97  EQMAMYKKHGTNPFSACLPMLIQMPFFFALFTVLSGISTASRGGEGIGAMNHEQVVQFDQ 156

Query: 471 TNIFTLFGILPFY---------LPGFMHVGIWPIIMSLSMFIQMKMSPP----------P 511
           + IF                  +  ++   +  + M+ S FI  K              P
Sbjct: 157 STIFGAPLSATLLHGTPPGGNVVAVWILSILMILAMTASQFITQKQIMAKNMSEEAMASP 216

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             + Q M+L  +P+VF     +FP G++IYW+ +N+ ++ QQ  +++     
Sbjct: 217 FMRQQKMMLYILPIVFGVGGINFPIGVLIYWTTTNLWTMGQQFFVIRRMPTP 268


>gi|126643002|ref|YP_001085986.1| inner membrane protein (IMP) integration factor [Acinetobacter
           baumannii ATCC 17978]
 gi|126388886|gb|ABO13384.1| Inner membrane protein (IMP) integration factor [Acinetobacter
           baumannii ATCC 17978]
          Length = 366

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/365 (16%), Positives = 125/365 (34%), Gaps = 36/365 (9%)

Query: 46  PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105
            + V  +  A      A A      + ++       IN KG     + L  +     SN 
Sbjct: 2   ASDVPQANIAQSQTTDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQ 61

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVW---------------NLISGKIL 150
           P V L +    K  Y A+   +             ++                  SG   
Sbjct: 62  PFVMLEND--AKRTYVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSE 119

Query: 151 TPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT- 209
              T   +        + +        Y   +   V N S    +    G++ R   +  
Sbjct: 120 KVLTVPMVFKTPEGVEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDP 179

Query: 210 ---ATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264
              +   F +        G       + K+++  +  ++       W+ +   Y+ S +I
Sbjct: 180 GKSSQGIFTLGTFLGGAWGTPDAHYNKLKFANFSEEKLN-TEAKGGWVAMVQHYFVSAWI 238

Query: 265 P-------SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317
           P       +    + ++ +            F++  I +  G S+     L++G K    
Sbjct: 239 PGNLKLTQANGQPYVAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSE 298

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           +               +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +P
Sbjct: 299 LKDLAV-----GLNQTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWP 353

Query: 378 LAKKQ 382
           L++K 
Sbjct: 354 LSQKV 358


>gi|239826978|ref|YP_002949602.1| hypothetical protein GWCH70_1536 [Geobacillus sp. WCH70]
 gi|239807271|gb|ACS24336.1| 60 kDa inner membrane insertion protein [Geobacillus sp. WCH70]
          Length = 252

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 71/257 (27%), Positives = 124/257 (48%), Gaps = 27/257 (10%)

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
              +  A     +     +   P  E        YF+     +L+   +    N+GIAI+
Sbjct: 1   MKKWIFALLGMVVLLSGCNRNAPIDEHSQGIWDHYFVYPMSKLLLMLGHLFGDNYGIAII 60

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTH 422
           + T+ V+    PL  KQY +T  M+ ++P++ +L+EK+K +     + LQK M+QLY+ H
Sbjct: 61  VLTLIVRFCLLPLILKQYKTTIAMQKLRPELQKLQEKYKGNDIETQRKLQKEMMQLYQKH 120

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
            I+P +GC P+ +Q+P+F A+Y  IS + E++    + W++ L   DP            
Sbjct: 121 GIHPASGCLPVFIQMPIFMALYYAISRTQEIKLHS-FLWVQ-LGHRDPYF---------- 168

Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQAMILNWMPVVFVFALSSFPAGLI 539
                    I PI+ SL+ FI +++SP   +      AM+   MP++     +S P+ L 
Sbjct: 169 ---------ILPILASLATFISVRLSPSMTEQQMPQMAMMSYIMPIMIFIGANSVPSALS 219

Query: 540 IYWSWSNVISIVQQAVI 556
           +YW      SI+Q  ++
Sbjct: 220 LYWVVGGCFSIIQSLIL 236


>gi|302393077|ref|YP_003828897.1| membrane protein insertase, YidC/Oxa1 family [Acetohalobium
           arabaticum DSM 5501]
 gi|302205154|gb|ADL13832.1| membrane protein insertase, YidC/Oxa1 family [Acetohalobium
           arabaticum DSM 5501]
          Length = 224

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/226 (26%), Positives = 114/226 (50%), Gaps = 29/226 (12%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
             F ++   M   + +FY    ++G++I+L T+ +++L FPL  KQ  S   M+ +QPK+
Sbjct: 14  EMFGWLGGLMTGSLDFFYGFTNSYGLSIILLTLAIRVLLFPLVAKQTRSMKAMQELQPKM 73

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +EL+E++     Q  Q+ +++LY+ H +NP AGC P+L+Q+P+  A++  I     ++  
Sbjct: 74  EELKEEYGD-DQQQYQQKVMELYQEHKVNPAAGCLPLLVQMPILIALFHSIRGFEALKQT 132

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF----IQMKMSPPPA 512
             + WI ++A  D                      +  I+  L MF    +Q KMS    
Sbjct: 133 S-FLWISNIAQPD---------------------LVLVILTGLVMFGQSMVQQKMSGNAG 170

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                 ++ +MP++ V      PA +++YW  SN++ + QQ  + +
Sbjct: 171 GNN--KMMMFMPLLIVVIGFRLPAAVLLYWFTSNLVMVAQQYFLYR 214


>gi|119963653|ref|YP_949872.1| 60Kd inner membrane family protein [Arthrobacter aurescens TC1]
 gi|119950512|gb|ABM09423.1| putative 60Kd inner membrane family protein [Arthrobacter aurescens
           TC1]
          Length = 329

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 27/233 (11%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQK 413
             + ++I+   + ++    P+  KQ  +   M+ +QP + +L+ K+K        Q + +
Sbjct: 37  WTWTLSIIGLVLVIRAALIPVFVKQIKAQRGMQLLQPDLKKLQTKYKGKTDQLSRQAMAQ 96

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKD--LAAADP 470
             + LYK H  NP + C P+L+Q+P FFA+++V+S  S   +     G +    +   D 
Sbjct: 97  EQMALYKKHGTNPFSACLPMLIQMPFFFALFQVLSGISTNAKQGQGVGAMSHEQVVQFDS 156

Query: 471 TNIFTLFGILPF----------YLPGFMHVGIWPIIMSLSMFIQMKMSPP---------- 510
           ++IF                   +  ++   +  I M+ S FI  K              
Sbjct: 157 SSIFGAPLSASLLHGDPSGGNSAVAVWVLSIVMIIAMTASQFITQKQIMAKNMSEEAMAS 216

Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           P  + Q M+L  +P+VF     +FP G++IYW+ +N+ ++ QQ  +++     
Sbjct: 217 PFMRQQKMMLYILPLVFGIGGINFPIGVLIYWTTTNLWTMGQQFFVIRRMPTP 269


>gi|220914666|ref|YP_002489975.1| hypothetical protein Achl_3934 [Arthrobacter chlorophenolicus A6]
 gi|219861544|gb|ACL41886.1| 60 kDa inner membrane insertion protein [Arthrobacter
           chlorophenolicus A6]
          Length = 324

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 104/253 (41%), Gaps = 25/253 (9%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
                        L+         + ++I+   + ++    P+  KQ  +   M+ +QP 
Sbjct: 15  VSIIMVGFHEGLTLIGMPAANGWTWTLSIIGLVLVIRAALIPVFVKQIKAQRGMQLLQPD 74

Query: 396 IDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           + +L++K+K        Q + +  + +YK H  NP + C P+L+Q+P FFA+++V+S   
Sbjct: 75  LKKLQDKYKGKTDQLSRQAMAQEQMAMYKKHGTNPFSACLPMLIQMPFFFALFQVLSGIS 134

Query: 452 EMRHAPFWGWIKD---LAAADPTNIFTLFGILPFY--------LPGFMHVGIWPIIMSLS 500
               A           +   D ++IF                    ++   +  + M+ S
Sbjct: 135 NNAKAGQGVGAMSHDQVVQFDESSIFGAPLSASLLHGGGGGNQTAVWILSIVMILAMTAS 194

Query: 501 MFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
            FI  K              P  + Q M+L  +P+VF     +FP G++IYW+ +N+ ++
Sbjct: 195 QFITQKQIMAKNMSEEAMASPFMRQQKMMLYILPIVFGVGGINFPIGVLIYWTTTNLWTM 254

Query: 551 VQQAVIMKMHGAE 563
            QQ  +++     
Sbjct: 255 GQQFFVIRRMPTP 267


>gi|311742159|ref|ZP_07715969.1| membrane protein OxaA [Aeromicrobium marinum DSM 15272]
 gi|311314652|gb|EFQ84559.1| membrane protein OxaA [Aeromicrobium marinum DSM 15272]
          Length = 328

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 23/259 (8%)

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYV 384
           I    M   +     +      +      L   +     I+  TV ++ L  PL  KQ  
Sbjct: 8   IGSLIMTPLYYAVSAVLLAWHWVFDNITFLSDGWVWTLSIVGLTVTIRALLIPLFVKQIK 67

Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
           S+ NM+ +QPKI EL++K+     + L +  ++L+K    NP A C P+L Q+PVFFA++
Sbjct: 68  SSRNMQLLQPKIKELQKKY-GHDRERLTQEQMKLWKETGTNPFASCLPLLAQMPVFFALF 126

Query: 445 KVISISLEM------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF----MHVGIWP 494
           + I  + +       R       ++ + +     IF       F         +   I  
Sbjct: 127 RTIDQAAKAPADDLERGVRGLFNVEYVESLQGATIFGARIADTFINTDLTQTRVLTMILV 186

Query: 495 IIMSLSMFIQMKMSPPPADK----------GQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
           I M  + F+  +                   Q M+L  +P VF      FP G+++YW+ 
Sbjct: 187 IAMCATQFLTQRQLMAKNMPPDALNGPYAQQQKMLLYILPPVFAIGGIFFPLGVLVYWTT 246

Query: 545 SNVISIVQQAVIMKMHGAE 563
           SN+ ++ QQ  +++ + A 
Sbjct: 247 SNLWTMGQQFYVIRRNPAP 265


>gi|87311362|ref|ZP_01093483.1| 60 kDa inner-membrane protein-like [Blastopirellula marina DSM
           3645]
 gi|87285942|gb|EAQ77855.1| 60 kDa inner-membrane protein-like [Blastopirellula marina DSM
           3645]
          Length = 788

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 90/517 (17%), Positives = 184/517 (35%), Gaps = 54/517 (10%)

Query: 86  GAQFDDLNL--RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWN 143
           G   +DL L  + + L  + +  IV   +    ++                         
Sbjct: 269 GKMINDLPLITKNWRLVENEDPTIVQFETLVTPEDLPQGVRFAKLRLVKTFQLPKKPTEA 328

Query: 144 LISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM 203
                         L   N      +                  +N I +       R +
Sbjct: 329 NAESNYQPYGLKYSLQVFNDGTEPVDAAFRQFGATGLPTEGWWYSNKIARGWGGAGLRDV 388

Query: 204 RHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVF 263
             +              IA        + +          +      + G+   Y++S  
Sbjct: 389 VWESSKGDYDMFTVAKIIA-----KAQDLESDRQISMFKVDDQIKPKFAGVDAVYFSSAM 443

Query: 264 IPSKETSFHSQFK-----------YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312
           + ++     +  +                         A E      K    +  +F+G 
Sbjct: 444 VFNESDKGPALSRGAAIVAAVVDEEQKQRTDCTYRLDGATETIEPGDKPFELSCTIFSGP 503

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFV 371
           K+   + HY         + L  +GWF++++  +  ++ + ++ +   +G+ I+  T+ V
Sbjct: 504 KKEELLAHY-------GLQNLEYYGWFHYVSTALLFVLHFMHDYLYIPYGLGIIFLTLMV 556

Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431
           +   FPL++KQ  +    + + P++ ++ E +K+ P +  ++A  +L+  +N NPL GC 
Sbjct: 557 RGCLFPLSRKQARNMLIQQQLAPEMKKISEMYKEDPIK-QRQAQQELFTKYNFNPLGGCG 615

Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWG---WIKDLAAADPTNIFTLFGILP------- 481
            + LQ+P+F  +Y+ +++ +++R APF     W  +L+A D    +   G+LP       
Sbjct: 616 VMFLQLPIFLGLYRALAVDIQLRQAPFIPGIEWCSNLSAPDQAWYW--VGVLPDFMTIHP 673

Query: 482 --FYLPGFMHVG----IWPIIMSLSMFIQMKMSPPPA----DKGQAMILNWMPVVFVFAL 531
              +   F+ +G    I P+       +Q KM  PPA     K Q  ++ +M V   F  
Sbjct: 674 SASFPASFLFLGPYLNILPLFTIALFLVQQKMFMPPAVDEQQKMQQQMMTYMMVFIGFMF 733

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
              P+GL IY+   +V  I+      +    +  L D
Sbjct: 734 FRVPSGLCIYFITQSVWGIL-----ERKLIPKPQLAD 765



 Score = 38.0 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/126 (11%), Positives = 25/126 (19%), Gaps = 27/126 (21%)

Query: 1   MERNWNYFVAIALSVIIVYAWQN------FYVYPRIEEMNNERKNIQTVKQPNQVDNSYA 54
           ME          ++V ++  +Q              +    E        QP        
Sbjct: 1   ME--RRVIAFSLIAVAMLMTFQMLGRRNQDAQPENPDAEQAEVAEKGDQPQPGDAGGDQP 58

Query: 55  AVLIDDRAQA----------LSMSPRVEL------KNPSLIGSINLKGAQFDDLNLR--G 96
              I     A                V L          L  + + +G     + L    
Sbjct: 59  NPEIKPADDAENEDEEVKEEPQPRKFVTLGSVSSADADML-VTFDTRGGSVARIELPADK 117

Query: 97  YHLDVS 102
           Y     
Sbjct: 118 YKSLED 123


>gi|83591337|ref|YP_431346.1| protein translocase subunit yidC [Moorella thermoacetica ATCC
           39073]
 gi|83574251|gb|ABC20803.1| protein translocase subunit yidC [Moorella thermoacetica ATCC
           39073]
          Length = 225

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 64/224 (28%), Positives = 121/224 (54%), Gaps = 33/224 (14%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           + N+G+AI+L T+ VK++ +PL  +Q  S   ++ +QPKI EL++K+ +S PQ  Q+AM+
Sbjct: 24  IPNYGLAIILFTIAVKVILYPLTYRQLRSMRRLQELQPKIQELQKKY-KSNPQKAQQAMM 82

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--------SLEMRHAPFWGWIKDLAAA 468
           +LY+   +NPL GC P+L+Q+P+ +A++  +          ++ + HA  + WI +L   
Sbjct: 83  ELYQKEKVNPLGGCLPLLIQMPILYALFTSLRSFFNPALNPTVNLAHA-NFLWISNLGQP 141

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWMPVV 526
           DP                     I P+++++  F Q K+S      D+ Q  +L  MP++
Sbjct: 142 DPY--------------------ILPVLVAVGTFFQQKVSMVSGGQDQTQKTMLFVMPLI 181

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM-HGAEIGLIDR 569
             +   +F AGL +YW   +++ I++Q +  +  H  +  +  +
Sbjct: 182 IGWMSRNFSAGLSLYWVTFSLMGILEQWLARRQPHLVKEEISAK 225


>gi|229007352|ref|ZP_04164950.1| Membrane protein oxaA 2 [Bacillus mycoides Rock1-4]
 gi|228753883|gb|EEM03323.1| Membrane protein oxaA 2 [Bacillus mycoides Rock1-4]
          Length = 260

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 75/244 (30%), Positives = 126/244 (51%), Gaps = 33/244 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           W ++   P+ +++ +  + V   +FGIAI++ T+ V+    PLA  QY S   MK +QP+
Sbjct: 37  WDHYFVYPISLMLQFVAHHVPGGSFGIAIIIITLLVRSAMIPLAVSQYRSQMKMKKMQPQ 96

Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           + +L+EK           +  QK M +L KT   NPLAGC P+L+Q+P+F A+Y  IS +
Sbjct: 97  MQKLKEKHGDVSKDIEKQKQYQKEMSELMKTGGWNPLAGCLPLLIQMPIFSALYYAISRT 156

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
            E+R    + W+ +L  ADP +                   I PI+ +L+ FIQMK+   
Sbjct: 157 EEIR-TSSFLWV-NLGHADPYH-------------------ILPILAALATFIQMKVMQS 195

Query: 511 PADKGQAMILN-----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
               G+ + +       MP + +F   + P+GL++YW   N+ +++Q  V+ K+   E G
Sbjct: 196 NVTPGEQVQMLKVQQFMMPAMILFMGFAAPSGLVLYWITGNIFTMLQTIVLRKVMDREEG 255

Query: 566 LIDR 569
            +  
Sbjct: 256 KLQN 259


>gi|212639373|ref|YP_002315893.1| stage III sporulation protein J essential for sigma-G activity
           [Anoxybacillus flavithermus WK1]
 gi|212560853|gb|ACJ33908.1| Stage III sporulation protein J essential for sigma-G activity
           [Anoxybacillus flavithermus WK1]
          Length = 260

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 72/269 (26%), Positives = 128/269 (47%), Gaps = 29/269 (10%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
           +  +      F  +     +  +P  E        YF+     +L+   +    N+G+AI
Sbjct: 10  SYIVKKWTILFFVLLLSACNRNVPITEHSQGVWDHYFVYPMSKLLLMLGHAFQENYGLAI 69

Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421
           +  T+ V+    PL  KQ+ +   M+ I+P++ +L++K+K +     + LQ+ M+QLY+ 
Sbjct: 70  VALTIVVRFGLLPLMIKQFRTNIVMQRIRPEMQKLQQKYKGTDMETQRKLQQEMMQLYQK 129

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           H +NP++GC PI +Q+P+F A+Y  IS + E++    + W++ L   DP           
Sbjct: 130 HGVNPMSGCLPIFIQMPIFMALYYAISRTEEIKLHS-FLWMQ-LGHRDPYF--------- 178

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQAMIL-NWMPVVFVFALSSFPAG 537
                     I PI+ SL+ FI M++SP         Q  I+   MPV+     SS P+ 
Sbjct: 179 ----------IMPILASLTTFISMRLSPSATTTEVATQMKIMSYIMPVMIFMGASSVPSA 228

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           L +YW      SI+Q  ++M+    +  +
Sbjct: 229 LSLYWVVGGCFSIIQS-LVMRAQWKKHQV 256


>gi|23100949|ref|NP_694416.1| stage III sporulation protein J [Oceanobacillus iheyensis HTE831]
 gi|38503017|sp|Q8EKU1|OXAA_OCEIH RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|22779184|dbj|BAC15450.1| stage III sporulation protein J [Oceanobacillus iheyensis HTE831]
          Length = 252

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 68/271 (25%), Positives = 118/271 (43%), Gaps = 35/271 (12%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
              +        T+     ++  P            F+    +++ +        +G+AI
Sbjct: 4   KFGIIVALIALTTLLSGCTEINEPITPNSDGIWNTIFVYPVSWLITNVAGVFNEGYGLAI 63

Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKT 421
           ++ T+FV+LL  PL  KQ  S+  M+ IQPK+ E+++K+        Q LQ+  ++L++ 
Sbjct: 64  IIVTLFVRLLLMPLNVKQIKSSKAMQEIQPKLQEIQKKYTSKDANTQQKLQQETMELFQK 123

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           + +NPLAGC PIL+Q+P+F A+Y  I  + E+     + W + L + D            
Sbjct: 124 NGVNPLAGCLPILVQMPIFVAMYHAIMRTPEI-STHSFLWFQ-LGSPD------------ 169

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--------QAMILNW-MPVVFVFALS 532
                     I PI+  L  F+Q K+                Q  I+ + MP++      
Sbjct: 170 ---------YILPILTGLFTFLQQKLMMSTNTSMNSNPQMKLQMQIMLYVMPIMIGVMAF 220

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            FPA L +YW   N+  + Q  +I K   A+
Sbjct: 221 FFPAALALYWVTGNIFMVFQTLLINKPMMAK 251


>gi|313893458|ref|ZP_07827028.1| stage III sporulation protein J [Veillonella sp. oral taxon 158
           str. F0412]
 gi|313441901|gb|EFR60323.1| stage III sporulation protein J [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 222

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 24/211 (11%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
             ++G+AI+L T+F+K +  PL  KQ  S   M+ +QP++ EL+ K+K  P   LQ  M 
Sbjct: 31  YPSYGVAIILLTIFIKAILAPLTVKQIKSMKAMQELQPRMQELQNKYKNDPA-RLQAEMG 89

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            LYK   +NPLAGC P+L+Q+P   AI+  +      ++   + W+  L   DP      
Sbjct: 90  ALYKEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYDQNYVQFLWLPSLGEPDPMY---- 145

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILN-WMPVVFVFALS 532
                          I P++ + S +I  K +      A   Q  I+  +MP+   +   
Sbjct: 146 ---------------ILPVLSAASTWIMSKQTGSGATGAAAQQQKIMTIFMPLFIGYISL 190

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           +FP+GL+IYW  SNV   VQQ  I K   A+
Sbjct: 191 NFPSGLVIYWIVSNVFQFVQQHFIYKGLEAK 221


>gi|315644292|ref|ZP_07897462.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus vortex
           V453]
 gi|315280667|gb|EFU43956.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus vortex
           V453]
          Length = 296

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 113/228 (49%), Gaps = 26/228 (11%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              +      L ++     G +G+++++  + V+ L  PL  KQ  S+  M+ IQP+I +
Sbjct: 48  SNVVYYFTLALDTFATWFNGEYGLSVLVMVLIVRTLILPLTLKQVRSSKAMQAIQPEIQK 107

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +REK+K  P + +Q   ++L++ + +NP+AGC P+++Q+P+F A+Y  I  +  +R    
Sbjct: 108 IREKYKDQPEK-VQMETMKLFQENKVNPMAGCLPLIVQMPIFIALYHSIYYNNLLRD-HE 165

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W++ L   D                      I P++ +++ ++Q KM        Q  
Sbjct: 166 FLWLQ-LGQPDKLF-------------------ILPVLAAITTYLQTKMMMKMNPSPQMG 205

Query: 519 ILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           ++ +M    P++       FP+ L +YW +SN+ +IVQ   + + +  
Sbjct: 206 MMQFMLFVYPILIFVMSFQFPSALPLYWFYSNLYTIVQNYFLYRNNDK 253


>gi|297563780|ref|YP_003682754.1| membrane protein insertase, YidC/Oxa1 family [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
 gi|296848228|gb|ADH70248.1| membrane protein insertase, YidC/Oxa1 family [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
          Length = 314

 Score =  132 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 22/272 (8%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
            +    GW           +    +    +G++I+L TV ++LL  PL  KQ  +   M+
Sbjct: 4   WLYNIVGWILVQIHSGLTYIGLDTDSGWAWGLSIVLLTVLMRLLLVPLFVKQMNTQRKMQ 63

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-- 448
           +IQPKI +LRE++ +   + LQ+  ++LY+    NP+ GC P+LLQ+PVFFA++ V+   
Sbjct: 64  DIQPKILKLRERY-KHDKERLQRESMKLYQESGTNPIMGCLPLLLQMPVFFALFSVLRSV 122

Query: 449 -----------ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
                        +E   A         A  + T    L       +   + + I  +IM
Sbjct: 123 AEGNAQYNFTPELVESARAALIFEAPVAAQFNSTPEELLALGASDPIMAKVIIAIACVIM 182

Query: 498 SLSMFIQMKMSP------PPADKGQA--MILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
             + F+ M+ S        P +       I+ +M  +F       P G+++YW  SNV +
Sbjct: 183 GTTTFLTMRQSMKRSVSQMPDNPMMQTQKIMMYMAPLFGLFGLMMPVGVLVYWVTSNVWT 242

Query: 550 IVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           + QQ  +     A      + +S  S N +++
Sbjct: 243 MGQQHFLYSRQPAPGQDEAKAKSGASANGSAK 274


>gi|332800544|ref|YP_004462043.1| membrane protein insertase, YidC/Oxa1 family [Tepidanaerobacter sp.
           Re1]
 gi|332698279|gb|AEE92736.1| membrane protein insertase, YidC/Oxa1 family [Tepidanaerobacter sp.
           Re1]
          Length = 209

 Score =  132 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 23/228 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
             F+   M  LM   +    ++GIAI+L TV +KL+  P +  Q  S   M+ I P   E
Sbjct: 1   MAFLQDLMKQLMDLIFVYTNSYGIAIILLTVLIKLILLPFSFMQINSMKKMQEITPLQQE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L++K+K    + L   +++LY+ + INP+ GC P+L+Q PV  A+++V   + +   A  
Sbjct: 61  LQKKYKNDKEK-LNMEIMKLYQENKINPMGGCLPLLIQFPVIIALFRVFQ-TYDFAGAS- 117

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQA 517
           + WI +L+  D T                    I PI+ +++ +IQ K+ +P  AD   A
Sbjct: 118 FLWISNLSKPDSTF-------------------ILPILAAVTTYIQTKLSTPAGADNPNA 158

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
            +   MP++  +    F AGL +YW  SNV+ IVQQ +  +       
Sbjct: 159 SMNIIMPLMIGWFSVKFAAGLALYWVVSNVVQIVQQLIFARPQAIAKE 206


>gi|220913496|ref|YP_002488805.1| hypothetical protein Achl_2751 [Arthrobacter chlorophenolicus A6]
 gi|219860374|gb|ACL40716.1| 60 kDa inner membrane insertion protein [Arthrobacter
           chlorophenolicus A6]
          Length = 266

 Score =  132 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 99/247 (40%), Gaps = 23/247 (9%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
                         +    +    + +AI+   + V+    P+   Q  +   M+ +QP 
Sbjct: 19  MSAVLVAFHNGLAALGLPSDGGWTWTLAIIGLVLVVRAALIPVFLAQVRAQRRMRQLQPD 78

Query: 396 IDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +  L+EK+         Q + +  + LY+ H  NP + C P+L+Q P F  +++V++   
Sbjct: 79  LKALQEKYAGRTDQQSRQAMAQEQMALYRKHGTNPFSACLPLLIQAPFFLGLFQVLAGIP 138

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFY---------LPGFMHVGIWPIIMSLSMF 502
           +             A A+  N  T+FG                  +      ++M+   F
Sbjct: 139 DAVGRGTGIGAMAAAQAEQFNSATIFGAPLSASLLHGGGDPAAVAVLALAMILVMTACQF 198

Query: 503 IQMKMS----------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +  K+           P P  + Q  IL  +P+VF    + FP G+++YW+ SN+ ++ Q
Sbjct: 199 LTQKLVTARTALGPDVPAPLLRQQRAILVALPLVFAAGGAFFPIGVLVYWTVSNLWTLGQ 258

Query: 553 QAVIMKM 559
           Q ++ + 
Sbjct: 259 QYLVTRK 265


>gi|223973321|gb|ACN30848.1| unknown [Zea mays]
          Length = 297

 Score =  132 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 102/216 (47%), Gaps = 22/216 (10%)

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
             M+N+QP++  +++++  +  + +Q    +LY+   +NPLAGC+P L  IPV+  +Y+ 
Sbjct: 1   MAMQNLQPQLKAIQQRYAGN-QERIQLETARLYRQAGVNPLAGCFPTLATIPVWIGLYQA 59

Query: 447 ISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-----------MHVGIWP 494
           +S  + E      + WI  L              + +  P             +   + P
Sbjct: 60  LSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWYDTICYLVLP 119

Query: 495 IIMSLSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
           +++  S ++ M++  PP   D  Q     +L ++P +  +   S P+GL IYW  +NV+S
Sbjct: 120 VLLVASQYVSMEIMKPPQSDDPSQKNTLLVLKFLPFMIGYFSLSVPSGLSIYWFTNNVLS 179

Query: 550 IVQQAVIMKMHGAEIGLID----RLRSTFSKNYNSQ 581
             QQ  + KM GA+  + +     + +  +K  N+Q
Sbjct: 180 TAQQVWLRKMGGAKPVVSEGDRRIITAGRAKRSNAQ 215


>gi|304405892|ref|ZP_07387550.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus
           curdlanolyticus YK9]
 gi|304345135|gb|EFM10971.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus
           curdlanolyticus YK9]
          Length = 258

 Score =  132 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 25/229 (10%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             +     +L ++     G +G++I+L T+ V+ L  PL  KQY S+  M+ IQP++++L
Sbjct: 47  NVVYWFALVLDTFAKWFGGEYGLSILLLTIIVRTLILPLTLKQYRSSKAMQAIQPELEQL 106

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           R+K K +P Q+LQ+  ++L++ +++NP+AGC P+++Q+PVF A+Y  I ++  +R    +
Sbjct: 107 RKKHKDNP-QLLQQETMKLFQQNSVNPMAGCLPMIVQMPVFIALYNAIYMNSAIR-EHQF 164

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQ 516
            W++ L   DP +                   I PII +++ F+Q KM          G 
Sbjct: 165 LWLE-LGQKDPYH-------------------ILPIIAAITTFVQTKMMQSQQKTTMPGM 204

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             +L   PV+      SFPA L +YW +SN+ +IVQ   +         
Sbjct: 205 QAMLLIFPVMIFVMALSFPAALPLYWIFSNLYTIVQNYFLYVRPSKRKE 253


>gi|310779691|ref|YP_003968024.1| protein translocase subunit yidC [Ilyobacter polytropus DSM 2926]
 gi|309749014|gb|ADO83676.1| protein translocase subunit yidC [Ilyobacter polytropus DSM 2926]
          Length = 208

 Score =  132 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 71/225 (31%), Positives = 115/225 (51%), Gaps = 25/225 (11%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
             FI  P+  ++ Y Y ++GNFG++I+  TV +KLL  PL  KQ  S   MK IQP+ID+
Sbjct: 1   MSFITVPLEQIILYLYKIIGNFGLSIIGITVLIKLLLLPLTLKQDKSMKAMKRIQPEIDK 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH--- 455
           ++EK+K    Q+L +  ++LY+ + +NP AGC P+L+Q+P+ +A++ V+  +        
Sbjct: 61  IKEKYKNDK-QLLNEKTMELYQKYKVNPAAGCLPMLVQLPILWALFAVLRKAPVDGGIVP 119

Query: 456 -APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
               + W+  L   DP                     I P++  L  F Q K+    ++ 
Sbjct: 120 VESTFLWLT-LVNPDPLY-------------------ILPVLNGLVAFAQQKIMGSGSNP 159

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
               ++   P++ VF     PAGL IYW  S+   I+QQ  +MK 
Sbjct: 160 QMKNMMYMFPIMMVFISYKMPAGLQIYWLTSSAAGILQQYYVMKR 204


>gi|227496609|ref|ZP_03926887.1| inner membrane protein translocase protein [Actinomyces
           urogenitalis DSM 15434]
 gi|226833889|gb|EEH66272.1| inner membrane protein translocase protein [Actinomyces
           urogenitalis DSM 15434]
          Length = 387

 Score =  132 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 27/231 (11%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAM 415
           + ++I+  T+FV+LL  PL  KQ  ++  M+ +QP++  L+ K+K        Q  Q+ M
Sbjct: 36  WVLSIVGLTIFVRLLIMPLFVKQIRASRGMQLMQPELQALQAKYKGKTDPASRQRQQEEM 95

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW--IKDLAAA--DPT 471
           + LY+ H  NP + C PIL+Q+PVFFA+++V++    +    +     I  L A   +  
Sbjct: 96  MALYRKHGTNPFSSCMPILVQMPVFFALFRVLASLQAVATGTYANHDSIGPLTAQLAEDV 155

Query: 472 NIFTLFG-------ILPFYLPGFMHVGIWPIIMSLSMFIQM-KMSPPPA--------DKG 515
              TLFG       +    +   +   I  I MS+S +  M +++            +  
Sbjct: 156 QASTLFGAHLSESFMNSSDVTTKVVTVIMIIAMSVSQWYTMAQLTMKNMPESSKNSDNPM 215

Query: 516 ---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
              Q M++  MP+ F F    F  G+++YW  +N+ ++ QQ + ++   A 
Sbjct: 216 MRSQRMMMTIMPIFFAFTGVQFQIGVLVYWVTTNLWTMGQQFLTIRNMPAP 266


>gi|219112651|ref|XP_002178077.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410962|gb|EEC50891.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 425

 Score =  132 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 22/247 (8%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
                 + + +  L+        ++G+AI+L T+ +K++ FPL K Q  ST  M+ +QP 
Sbjct: 100 TIPIKLLLQAIHSLLLTVGLNTNSWGVAIVLLTILIKVVTFPLTKTQLESTNKMQAMQPA 159

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           I EL+ K++ +P  +  + + + Y+T+ INPLAGC P ++QIPVF  +Y+ +   LE+  
Sbjct: 160 IKELQAKYQSNPEVM-NQKIAEFYQTNEINPLAGCLPSIVQIPVFIGLYRAV---LELAQ 215

Query: 456 A----PFWGWIKDL----------AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501
           A      + ++ +L          +AAD        G+     P  +   I P+ + +S 
Sbjct: 216 ANKLDESFLFLPNLEGPTYGAEPGSAADWILKGWTDGVPSLGWPDTIAFLILPVFLVISQ 275

Query: 502 FIQMK-MSPPPADKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           ++ M+ M P   D  Q     IL  +P++  +   S PA L +YW  +N+I+     +I 
Sbjct: 276 YLSMELMQPKTDDPAQQQSNAILKVLPIMIGWFSLSVPAALSVYWVINNIITTGTSLIIR 335

Query: 558 KMHGAEI 564
                E 
Sbjct: 336 NSMSVET 342


>gi|227902597|ref|ZP_04020402.1| stage III sporulation protein J [Lactobacillus acidophilus ATCC
           4796]
 gi|227869686|gb|EEJ77107.1| stage III sporulation protein J [Lactobacillus acidophilus ATCC
           4796]
          Length = 298

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 21/264 (7%)

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379
                   P      +W   + +      ++     +  ++G AI++ T+ V+++  PL 
Sbjct: 39  QGANGQVTPVSHTSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIVRVILLPLN 98

Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQ 436
                ST  M++IQP+I+ELR+K+     +     Q+   +LYK   +NP  GC P+++Q
Sbjct: 99  AISIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVIIQ 158

Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           +PV +A+Y  I  + ++     + W+ DL+  DP  I  +  +               + 
Sbjct: 159 LPVMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAM---------------VF 201

Query: 497 MSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
             LS +I    +P  +  G   ++ + M ++      +F + + +YW  SN+   VQ  +
Sbjct: 202 TFLSTYISQLSTPKSSQNGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQAVQTFI 261

Query: 556 IMKMHGAEIGLIDRLRSTFSKNYN 579
           +            +  +   +   
Sbjct: 262 LQNPIKYRKEQEAKNEAERERKRK 285


>gi|228999798|ref|ZP_04159371.1| Membrane protein oxaA 2 [Bacillus mycoides Rock3-17]
 gi|228759947|gb|EEM08920.1| Membrane protein oxaA 2 [Bacillus mycoides Rock3-17]
          Length = 260

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 75/244 (30%), Positives = 126/244 (51%), Gaps = 33/244 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           W ++   P+ +++ +  + V   +FGIAI++ T+ V+    PLA  QY S   MK +QP+
Sbjct: 37  WDHYFVYPISLMLQFVAHHVPGGSFGIAIIIITLLVRSAMIPLAVSQYRSQMKMKKMQPQ 96

Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           + +L+EK           +  QK M +L KT   NPLAGC P+L+Q+P+F A+Y  IS +
Sbjct: 97  MQKLKEKHGDVSKDIEKQKQYQKEMSELMKTGGWNPLAGCLPLLIQMPIFSALYYAISRT 156

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
            E+R    + W+ +L  ADP +                   I PI+ +L+ FIQMK+   
Sbjct: 157 EEIR-TSSFLWV-NLGHADPYH-------------------ILPILAALATFIQMKVMQS 195

Query: 511 PADKGQAMILN-----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
               G+ + +       MP + +F   + P+GL++YW   N+ +++Q  V+ K+   E G
Sbjct: 196 NVTPGEQVQMLKVQQFMMPAMILFMGFAAPSGLVLYWITGNIFTMLQTIVLRKVMDREEG 255

Query: 566 LIDR 569
            +  
Sbjct: 256 QLQN 259


>gi|325284198|ref|YP_004256739.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus
           proteolyticus MRP]
 gi|324316007|gb|ADY27122.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus
           proteolyticus MRP]
          Length = 576

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 91/499 (18%), Positives = 161/499 (32%), Gaps = 65/499 (13%)

Query: 75  NPSLIGSINLKGAQFDDLNLRGY------HLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128
                   N KG +     ++ Y        +         L +     N        + 
Sbjct: 103 TNLADIVFNNKG-EIIGWYVKNYAGSPYIKENADGTYDFTALQNERGIINLVNGPALQIQ 161

Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN 188
             N             +S    T        ++     + +       +YL  +  T   
Sbjct: 162 AENLDPKAPVTAQEPQLSNNGETNEQVAVFRYEQGGVPVTKTVTIHTRNYLINVK-TEVG 220

Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES 248
                 +    G      P+        +   +   G  ++   +Y+ ++    +     
Sbjct: 221 GGTQNYQMLLPGLGNDGNPRVRALPQVGEVATVQGAGVTTVENIRYAAMQHVPPNQMSP- 279

Query: 249 NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL 308
                          +   E       +     +A      S N    + G      +  
Sbjct: 280 -------------AILVRPEGGTRVDAQMTGGSNALLTLGLSGNSSVDVYGGRNELIH-- 324

Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368
                         K         + D  WF  I+  +  LM   + LVG++GI I+L  
Sbjct: 325 -------------LKQTGFYGMPGVFDPNWFGHISLAIVSLMELLHRLVGDWGIVILLIA 371

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNI 424
           V ++L+ +P+ + Q  +TA M+ +QPK+ E+++++K +      + +Q  M  LYK HN 
Sbjct: 372 VLLRLVMWPVMQAQARTTAKMQVLQPKMKEIQDRYKDAKDLESQRAMQMEMAALYKEHNF 431

Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484
           NP  GC    L +PV  A++  I    E      + W+ DLA  DP  I     ++    
Sbjct: 432 NPA-GCLSSFLPLPVLIALWSTIRN-FEF--DSGFLWMPDLAIPDPLWILPALYLIVNMG 487

Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
             ++     P      MF Q                 +M + FV+    FPAG+ IY   
Sbjct: 488 QLWVSTRRTP-----EMFKQQ---------------AFMYLFFVYFALIFPAGVSIYLII 527

Query: 545 SNVISIVQQAVIMKMHGAE 563
           S  I I+QQ ++ K    E
Sbjct: 528 STAIGILQQFIVNKQVEVE 546


>gi|269122891|ref|YP_003305468.1| 60 kDa inner membrane insertion protein [Streptobacillus
           moniliformis DSM 12112]
 gi|268314217|gb|ACZ00591.1| 60 kDa inner membrane insertion protein [Streptobacillus
           moniliformis DSM 12112]
          Length = 224

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 21/228 (9%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
             ++      L+   Y  VGN+GIAI++TT  V+LL  PL  KQ  S   M+ IQP ++ 
Sbjct: 8   PKWLVDAAVKLLDLIYGFVGNYGIAIIVTTFLVRLLLLPLTLKQEKSMKRMREIQPMLEA 67

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           ++EK+K    Q+  +  ++LY+   +NP  GC P+L+Q+PVF A+Y     +  +     
Sbjct: 68  IKEKYKDDK-QMQNQKTMELYQQEKVNPAGGCLPLLIQLPVFVALYHAF-TTNALPENAT 125

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DK 514
           + W  +L+  D       F            + I P++ ++  FIQ K+         D 
Sbjct: 126 FLWF-NLSKPDALFTLQGF-----------SINILPLLTTVLTFIQQKLMQAKTQGSNDP 173

Query: 515 G---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
                  ++  MP++ +      P+GL +Y+  + ++S++QQ  +M  
Sbjct: 174 MAGSMQTMMYTMPILMLLIFYKMPSGLNLYYFVNTLLSVLQQVYVMNR 221


>gi|227550637|ref|ZP_03980686.1| stage III sporulation protein J precursor [Enterococcus faecium
           TX1330]
 gi|257888098|ref|ZP_05667751.1| inner membrane protein [Enterococcus faecium 1,141,733]
 gi|257896284|ref|ZP_05675937.1| inner membrane protein [Enterococcus faecium Com12]
 gi|257899268|ref|ZP_05678921.1| inner membrane protein [Enterococcus faecium Com15]
 gi|293379365|ref|ZP_06625509.1| putative stage III sporulation protein J [Enterococcus faecium
           PC4.1]
 gi|227180238|gb|EEI61210.1| stage III sporulation protein J precursor [Enterococcus faecium
           TX1330]
 gi|257824152|gb|EEV51084.1| inner membrane protein [Enterococcus faecium 1,141,733]
 gi|257832849|gb|EEV59270.1| inner membrane protein [Enterococcus faecium Com12]
 gi|257837180|gb|EEV62254.1| inner membrane protein [Enterococcus faecium Com15]
 gi|292641888|gb|EFF60054.1| putative stage III sporulation protein J [Enterococcus faecium
           PC4.1]
          Length = 272

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 27/226 (11%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQK 413
            GN GI I+L T+ ++++  PL   Q  S    + +QPK+  L++++    P+    L++
Sbjct: 53  FGNAGIGIILFTLIIRVILLPLMHFQTKSMRKTQELQPKLKALQQQYSSRDPETQSKLRE 112

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
              +LY  + +NP AGC P+L+Q+P+  A+++ IS   E++    + W+ +L  ADPT  
Sbjct: 113 EQQRLYAENGVNPYAGCLPLLVQMPILMALWQSISRVPELKQ-GHFLWL-NLGNADPTF- 169

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNW-MPVVFVFA 530
                             I PI+ ++  F    +S            I+N+ MPV+ +  
Sbjct: 170 ------------------ILPILAAIFTFASTYLSSMSQIESNASMKIMNFVMPVMILVM 211

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
             +  +GL +YW  SN   +VQ  +I           +  R    +
Sbjct: 212 GVNLASGLSLYWVVSNAFQVVQTLLINNPFKIRKEREEEARKIRER 257


>gi|260904985|ref|ZP_05913307.1| 60 kDa inner membrane insertion protein [Brevibacterium linens BL2]
          Length = 319

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 23/247 (9%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK---- 413
             + ++I   T+ ++ +  PL   Q  S   M+ +QP+I  L+ K+K    Q  ++    
Sbjct: 37  WTWVLSIAGLTLVIRAVLIPLFVYQIKSQRKMQLLQPEIQRLQAKYKGKKDQYSRQAMAE 96

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP---FWGWIKDLA-AAD 469
             + L++ +  +P A C P+L+Q+P+FF++++VI    ++         G+ ++LA  A+
Sbjct: 97  EQMNLFRDNKTSPWASCLPLLVQMPIFFSLFRVIHNMPDVASGSVGAIGGFTQELAIQAE 156

Query: 470 PTNIFTLFGILPFY---LPGFMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQ 516
            +++F +     F    +   +  G+  +IM+ +MFI  K              P  + Q
Sbjct: 157 QSSVFGISLSATFMSDGIGVKLLTGVLIVIMASTMFITQKQMMAKNMSESAMANPMMQSQ 216

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE--IGLIDRLRSTF 574
            M+L  MP+VF      FP G++ YW  SN  ++ QQ V+++   A       + L    
Sbjct: 217 KMLLYVMPLVFGIGGIYFPLGVLFYWLVSNTWTMCQQHVVIRNMPAPGSKAEKEMLERKA 276

Query: 575 SKNYNSQ 581
            K    Q
Sbjct: 277 RKGKPVQ 283


>gi|315925607|ref|ZP_07921817.1| stage III sporulation protein J [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315621148|gb|EFV01119.1| stage III sporulation protein J [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 296

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 39/245 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              + +    ++   YNLV ++G A++L T+ VK +  PL  KQ  S   M+ +QP+++ 
Sbjct: 1   MNILYQAFGFVLYQIYNLVKDYGFAVILFTIIVKTIILPLNIKQTNSMREMQAVQPELNN 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL------- 451
           L++K+K +P + L    ++LYK +N+NP+AGC P+L+Q+P+ + ++  +           
Sbjct: 61  LQKKYKNNPEK-LNAETMKLYKLYNVNPMAGCLPLLIQLPIIWGLFGALRSPAKYVFTNG 119

Query: 452 ---EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
               +R    + WI +L   DP                     + PI+  +  FI     
Sbjct: 120 NLSALR--AGFYWIPNLGKPDPYF-------------------VLPILCVVLTFITQWYM 158

Query: 509 P-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
                     A   Q ++L  MP++  +     PAG+ +YW   N  + VQQ ++M+   
Sbjct: 159 MRFQDDGNKAAQSSQKVMLYVMPLMIGWFAVKMPAGVALYWVVQNAYTFVQQFLVMRKPV 218

Query: 562 AEIGL 566
            ++ +
Sbjct: 219 EKVSI 223


>gi|293572715|ref|ZP_06683679.1| membrane protein OxaA 1 [Enterococcus faecium E980]
 gi|291607207|gb|EFF36565.1| membrane protein OxaA 1 [Enterococcus faecium E980]
          Length = 272

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 27/226 (11%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQK 413
            GN GI I+L T+ ++++  PL   Q  S    + +QPK+  L++++    P+    L++
Sbjct: 53  FGNAGIGIILFTLIIRVILLPLMHFQTKSMRKTQELQPKLKALQQQYSSRDPETQSKLRE 112

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
              +LY  + +NP AGC P+L+Q+P+  A+++ IS   E++    + W+ +L  ADPT  
Sbjct: 113 EQQRLYAENGVNPYAGCLPLLVQMPILMALWQSISRVPELKQ-GHFLWL-NLGNADPTF- 169

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNW-MPVVFVFA 530
                             I PI+ ++  F    +S            I+N+ MPV+ +  
Sbjct: 170 ------------------ILPILAAIFTFASTYLSSMSQIESNASMKIMNFVMPVMILVM 211

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
             +  +GL +YW  SN   +VQ  +I           +  R    +
Sbjct: 212 GVNLASGLSLYWVVSNAFQVVQTLLINNPFKIRKEREEEARKIRER 257


>gi|302798427|ref|XP_002980973.1| hypothetical protein SELMODRAFT_12954 [Selaginella moellendorffii]
 gi|300151027|gb|EFJ17674.1| hypothetical protein SELMODRAFT_12954 [Selaginella moellendorffii]
          Length = 313

 Score =  131 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 121/262 (46%), Gaps = 30/262 (11%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYN------LVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
                 WF  +   M  ++    +      +   +G AI+L TV VK+L FPL K Q  S
Sbjct: 31  QAQQSDWFSGVTTVMEAVLKVLKDGLTTLKVPYAYGFAIILLTVLVKVLTFPLTKSQAES 90

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           T +M+N+QPK+  +++++     + +Q    +LYK   +NPLAGC P L  +PV+  +Y+
Sbjct: 91  TISMQNLQPKLKAIQQRYAG-DQERIQMETARLYKQAGVNPLAGCLPTLATLPVWIGLYR 149

Query: 446 VISI-SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIW 493
            +S  + E   +  + WI  LA           + I  LF    G  P      +   + 
Sbjct: 150 ALSNVANEGLLSEGFFWIPSLAGPTTIAARQSGSGISWLFPFVDGHPPLGWGDTIAYLVL 209

Query: 494 PIIMSLSMFI-QMKMSPPPADKGQAM---ILNWMPVVFVFALSSFPAGLIIYWS-----W 544
           P+++  S +     M PP  D  Q     IL ++P++  +   S P+GL +YW       
Sbjct: 210 PVLLIGSQYASMQIMQPPQTDPSQKNTQLILKFLPLMIGYFALSVPSGLSLYWLSTENRV 269

Query: 545 SN--VISIVQQAVIMKMHGAEI 564
           +N  ++S  QQ  + K+ G + 
Sbjct: 270 ANKHILSTGQQVWLRKLGGRKP 291


>gi|253573861|ref|ZP_04851203.1| inner membrane insertion protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846338|gb|EES74344.1| inner membrane insertion protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 280

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 64/228 (28%), Positives = 113/228 (49%), Gaps = 26/228 (11%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           W     +      L ++     G +GIAI++  + V+ L  PL  KQ  S+  M+ IQP+
Sbjct: 28  WWTSNVVYYFSLALDTFAEWFNGAYGIAILIMVLIVRTLILPLTLKQVKSSKAMQAIQPQ 87

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           + ++RE++K +P +  Q+  ++L++ H +NP+AGC+P+L+Q+PVF A+Y  I  +  +R 
Sbjct: 88  LQKIREQYKDNPEK-QQQETMKLFQEHKVNPMAGCFPLLIQMPVFIALYNSIYYNSAIR- 145

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM----SPPP 511
              + W++ L   D                      I P I +++ FIQ KM    +P  
Sbjct: 146 EHSFLWLQ-LGEPDKLF-------------------ILPAIAAITTFIQTKMMSSMNPQG 185

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
                A ++   P++      +F A L +YW +SN+ +I Q   I + 
Sbjct: 186 MQGPMAFMMWVYPILIFVMAYNFAAALPLYWIFSNLYTIAQNYFIYRK 233


>gi|328469001|gb|EGF39959.1| hypothetical protein LM220_14040 [Listeria monocytogenes 220]
          Length = 268

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 114/224 (50%), Gaps = 27/224 (12%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    + +  +     G++ + I++ T+ ++LL  PL  KQ  S   M N+QPKI EL
Sbjct: 45  YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 104

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +EK+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E++  
Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513
             + W++ L   DP                     I P++ +L+ F+  K+S       +
Sbjct: 165 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 203

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I 
Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLIN 247


>gi|196249190|ref|ZP_03147889.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16]
 gi|196211419|gb|EDY06179.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16]
          Length = 249

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 124/245 (50%), Gaps = 27/245 (11%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
               P  E        YF+     +L+++ +    N+GIAI++ T+ V+    PL  KQ+
Sbjct: 19  SSNEPIDEHSQGIWNHYFVYPMSKLLLTFGHWFGDNYGIAIIVLTLIVRFCLLPLILKQF 78

Query: 384 VSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
            ++  M+ ++P++ +L+EK+K   P   + LQ+ M+QLY+ H INP +GC P+L+Q+P+F
Sbjct: 79  RTSIAMQKLRPELLKLQEKYKSKDPETQRKLQQEMVQLYQKHGINPASGCLPVLIQMPIF 138

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            A+Y  IS + E++    + W++ L   DP                     I PI+ +L+
Sbjct: 139 MALYYAISRTQEIKTHS-FLWVE-LGHRDPYF-------------------ILPILAALT 177

Query: 501 MFIQMKMSPPPAD---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            F+ +++SP   +      AM+   MPV+     SS P+ L +YW      SI+Q  ++ 
Sbjct: 178 TFLSLRLSPSMTEEQMPQMAMMSYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLMLR 237

Query: 558 KMHGA 562
               A
Sbjct: 238 SQLKA 242


>gi|58338216|ref|YP_194801.1| stage III sporulation protein J [Lactobacillus acidophilus NCFM]
 gi|58255533|gb|AAV43770.1| stage III sporulation protein J [Lactobacillus acidophilus NCFM]
          Length = 291

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 21/264 (7%)

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379
                   P      +W   + +      ++     +  ++G AI++ T+ V+++  PL 
Sbjct: 32  QGANGQVTPVSHTSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIVRVILLPLN 91

Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQ 436
                ST  M++IQP+I+ELR+K+     +     Q+   +LYK   +NP  GC P+++Q
Sbjct: 92  AISIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVIIQ 151

Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           +PV +A+Y  I  + ++     + W+ DL+  DP  I  +  +               + 
Sbjct: 152 LPVMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAM---------------VF 194

Query: 497 MSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
             LS +I    +P  +  G   ++ + M ++      +F + + +YW  SN+   VQ  +
Sbjct: 195 TFLSTYISQLSTPKSSQNGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQAVQTFI 254

Query: 556 IMKMHGAEIGLIDRLRSTFSKNYN 579
           +            +  +   +   
Sbjct: 255 LQNPIKYRKEQEAKNEAERERKRK 278


>gi|300742660|ref|ZP_07072681.1| putative 60Kd inner membrane family protein [Rothia dentocariosa
           M567]
 gi|300381845|gb|EFJ78407.1| putative 60Kd inner membrane family protein [Rothia dentocariosa
           M567]
          Length = 337

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 103/258 (39%), Gaps = 26/258 (10%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F++ +    ++F      + M         + + I+  T+ ++ L  PL  KQ  +   M
Sbjct: 6   FKLAVSAVLWFFHTIFTSIGMDPSSGFT--WVLCIICLTLVMRTLTIPLFVKQIKAMRGM 63

Query: 390 KNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
             +Q  + +L+ K+K        Q + +  + LYK H  NP A C PI+ Q+P+FF +Y+
Sbjct: 64  NAMQGDLAKLQAKYKGKKDQLSRQAMAQEQMALYKKHGTNPFASCLPIIAQMPIFFGLYQ 123

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL----------PGFMHVGIWPI 495
           V+              +         +   +FG   F                   I  +
Sbjct: 124 VLMGISGAAAKNEGILLLPAELVKQFSEAHIFGAPIFSTMMNPGNGNHAATVAQAIIMIL 183

Query: 496 IMSLSMFIQMKM----SPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
           +MS + F   K     +   A K       Q M++   P++F     +FP G++ YW+ S
Sbjct: 184 LMSGTQFFIQKQLSAKNMSEAAKNSPIFRQQQMMMYIFPIIFAVTGINFPLGVMYYWTVS 243

Query: 546 NVISIVQQAVIMKMHGAE 563
           N  ++ QQ  +++ +   
Sbjct: 244 NFWALGQQWWVIRNNPTP 261


>gi|255657635|ref|ZP_05403044.1| putative sporulation membrane protein [Clostridium difficile
           QCD-23m63]
 gi|296452684|ref|ZP_06894375.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP08]
 gi|296880064|ref|ZP_06904033.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP07]
 gi|296258466|gb|EFH05370.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP08]
 gi|296428931|gb|EFH14809.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP07]
          Length = 235

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 36/254 (14%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              I   + +++   +  V ++GI+I+L T+ VK++  PL  KQ  ST  M++IQP+I E
Sbjct: 1   MNIIGNFLGLILKVIFEFVNHYGISIILFTILVKIILLPLTIKQTKSTKAMQDIQPRIKE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE------ 452
           ++EK+K   P+   + +++LY    INPL+GC P+L+Q P+   ++ V+   +       
Sbjct: 61  IQEKYKN-KPEKQNEEIVKLYGEAKINPLSGCLPLLIQFPILIGLFSVLREPVAHGVFAN 119

Query: 453 ----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
               +     + WIK L + D                      I  +    S ++  K+ 
Sbjct: 120 KAAFLAADNGFLWIKSLTSPD---------------------YILAVFSGASAYVMQKV- 157

Query: 509 PPPADKGQ--AMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             P D+ Q    ++ + M  +  +    FPAGL +YW+ SN+ SI Q  +IM    A++ 
Sbjct: 158 MTPKDQLQGSMKVMTYVMAGMSFYWGFIFPAGLTLYWTVSNLFSIAQYYLIMNPLKAKLA 217

Query: 566 LIDRLRSTFSKNYN 579
              +      K   
Sbjct: 218 ANSKEEKVNEKKPK 231


>gi|138895363|ref|YP_001125816.1| stage III sporulation protein J [Geobacillus thermodenitrificans
           NG80-2]
 gi|134266876|gb|ABO67071.1| Stage III sporulation protein J [Geobacillus thermodenitrificans
           NG80-2]
          Length = 249

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 124/245 (50%), Gaps = 27/245 (11%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
               P  E        YF+     +L+++ +    N+GIAI++ T+ V+    PL  KQ+
Sbjct: 19  SSNEPIDEHSQGIWNHYFVYPMSKLLLTFGHWFGNNYGIAIIVLTLIVRFCLLPLILKQF 78

Query: 384 VSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
            ++  M+ ++P++ +L+EK+K   P   + LQ+ M+QLY+ H INP +GC P+L+Q+P+F
Sbjct: 79  RTSIAMQKLRPELLKLQEKYKSKDPETQRKLQQEMVQLYQKHGINPASGCLPVLIQMPIF 138

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            A+Y  IS + E++    + W++ L   DP                     I PI+ +L+
Sbjct: 139 MALYYAISRTQEIKTHS-FLWVE-LGHRDPYF-------------------ILPILAALT 177

Query: 501 MFIQMKMSPPPAD---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            F+ +++SP   +      AM+   MPV+     SS P+ L +YW      SI+Q  ++ 
Sbjct: 178 TFLSLRLSPSMTEEQMPQMAMMSYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLMLR 237

Query: 558 KMHGA 562
               A
Sbjct: 238 SQLKA 242


>gi|269798910|ref|YP_003312810.1| hypothetical protein Vpar_1856 [Veillonella parvula DSM 2008]
 gi|269095539|gb|ACZ25530.1| 60 kDa inner membrane insertion protein [Veillonella parvula DSM
           2008]
          Length = 221

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 24/211 (11%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
             ++G+AI+L T+ +K +  PL  KQ  S   M+ +QP++ +L++K+K  P + LQ  M 
Sbjct: 31  YPSYGVAIILLTIVIKAILAPLTVKQIKSMKAMQELQPRMKQLQDKYKNDPAK-LQAEMG 89

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            LYK   +NPLAGC P+L+Q+P   AIY  +       +   + W+  L   DP      
Sbjct: 90  ALYKEMGVNPLAGCLPLLVQMPFLIAIYWALKDYPYDPNFVQFLWLPSLGDPDPMY---- 145

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMILN-WMPVVFVFALS 532
                          I PI+ +LS ++  + +      A   Q  I+  +MP+   +   
Sbjct: 146 ---------------ILPILSALSTWVMSRQTSSGATGAAAQQQKIMTIFMPLFIGYISL 190

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           SFP+GL+IYW  SNV  ++QQ  I K   A+
Sbjct: 191 SFPSGLVIYWVVSNVFQLIQQHFIYKNLNAK 221


>gi|304385852|ref|ZP_07368196.1| stage III sporulation protein J [Pediococcus acidilactici DSM
           20284]
 gi|304328356|gb|EFL95578.1| stage III sporulation protein J [Pediococcus acidilactici DSM
           20284]
          Length = 279

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 56/249 (22%), Positives = 113/249 (45%), Gaps = 29/249 (11%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
            +      ++        N+G  I++ TV ++++  PL   Q  ++     +QPK+ EL+
Sbjct: 40  IVYNFSKFIIYLSKICGNNYGWGIIVFTVLIRIIILPLMIYQTKTSMKTAELQPKLKELQ 99

Query: 401 EKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +K+        Q L++   +LY    +NP+AGC P+++Q+PV +A+Y  +S +  ++   
Sbjct: 100 QKYSSRDVETQQKLREEQQKLYAEAGVNPMAGCLPLIIQLPVMYALYAAVSRTQVLK-EG 158

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL----SMFIQMKMSPPPAD 513
            + W++ L   DP                     I PI+ ++    S ++ MK  P  A 
Sbjct: 159 TFLWLQ-LNDKDPYY-------------------ILPILAAIFTFLSTWLSMKAQPAGAQ 198

Query: 514 KGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
            G    + + MP++ +    +FPA + +YW  +N+  + Q  VI      +     +L++
Sbjct: 199 NGMTSAMTFGMPLIILITALNFPAAITLYWVVTNLFQVGQTLVIQNPFKIQKERQAKLQA 258

Query: 573 TFSKNYNSQ 581
             +K    +
Sbjct: 259 EKAKRKAIE 267


>gi|227498802|ref|ZP_03928942.1| sporulation associated-membrane protein [Acidaminococcus sp. D21]
 gi|226904254|gb|EEH90172.1| sporulation associated-membrane protein [Acidaminococcus sp. D21]
          Length = 210

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 61/202 (30%), Positives = 108/202 (53%), Gaps = 22/202 (10%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            ++G+AI++ T+ +KLL +PL K+Q  ST  M  IQP++ EL+ +++    + L + + +
Sbjct: 25  PSYGLAIIIMTILIKLLLYPLTKRQIASTKAMSRIQPRMKELQMRYRDDKMK-LNEELSK 83

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   +NPLAGC P+++Q+P+   I+  I           + W++ +   DP       
Sbjct: 84  LYKKEGVNPLAGCLPLVIQMPIMIGIFYGIR-DFNYEGPSSFLWMQSIGQPDPYY----- 137

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-KGQAMILNWMPVVFVFALSSFPA 536
                         I PI+ +L+ +IQ + S PP+D     ++L +MP+   +    FPA
Sbjct: 138 --------------ILPILSALTTYIQSRQSMPPSDNPTGKVMLYFMPLFIGYISLKFPA 183

Query: 537 GLIIYWSWSNVISIVQQAVIMK 558
           GL++YW   N++ I QQ  + +
Sbjct: 184 GLVLYWVVMNLMQIGQQFFMDR 205


>gi|126701305|ref|YP_001090202.1| putative sporulation membrane protein [Clostridium difficile 630]
 gi|254977339|ref|ZP_05273811.1| putative sporulation membrane protein [Clostridium difficile
           QCD-66c26]
 gi|255102896|ref|ZP_05331873.1| putative sporulation membrane protein [Clostridium difficile
           QCD-63q42]
 gi|255308716|ref|ZP_05352887.1| putative sporulation membrane protein [Clostridium difficile ATCC
           43255]
 gi|255316423|ref|ZP_05358006.1| putative sporulation membrane protein [Clostridium difficile
           QCD-76w55]
 gi|255519083|ref|ZP_05386759.1| putative sporulation membrane protein [Clostridium difficile
           QCD-97b34]
 gi|255652266|ref|ZP_05399168.1| putative sporulation membrane protein [Clostridium difficile
           QCD-37x79]
 gi|260685220|ref|YP_003216505.1| putative sporulation membrane protein [Clostridium difficile CD196]
 gi|260688879|ref|YP_003220013.1| putative sporulation membrane protein [Clostridium difficile
           R20291]
 gi|306521981|ref|ZP_07408328.1| putative sporulation membrane protein [Clostridium difficile
           QCD-32g58]
 gi|115252742|emb|CAJ70587.1| Sporulation membrane protein SpoIIIJ [Clostridium difficile]
 gi|260211383|emb|CBA67040.1| putative sporulation membrane protein [Clostridium difficile CD196]
 gi|260214896|emb|CBE07703.1| putative sporulation membrane protein [Clostridium difficile
           R20291]
          Length = 235

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 65/254 (25%), Positives = 117/254 (46%), Gaps = 36/254 (14%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              I   + +++   +  V ++GI+I+L T+ VK++  PL  KQ  ST  M++IQP+I E
Sbjct: 1   MNIIGNFLGLILKVIFEFVNHYGISIILFTILVKIILLPLTIKQTKSTKAMQDIQPRIKE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE------ 452
           ++EK+K   P+   + +++LY    INPL+GC P+L+Q P+   ++ V+   +       
Sbjct: 61  IQEKYKN-KPEKQNEEIVKLYGEAKINPLSGCLPLLIQFPILIGLFSVLREPVAHGVFAN 119

Query: 453 ----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
               +     + WIK L + D                      +  +    S ++  K+ 
Sbjct: 120 KAAFLAADNGFLWIKSLTSPD---------------------YVLAVFSGASAYVMQKV- 157

Query: 509 PPPADKGQ--AMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             P D+ Q    ++ + M  +  +    FPAGL +YW+ SN+ SI Q  +IM    A++ 
Sbjct: 158 MTPKDQLQGSMKVMTYVMAGMSFYWGFIFPAGLTLYWTVSNLFSIAQYYLIMNPLKAKLA 217

Query: 566 LIDRLRSTFSKNYN 579
              +      K   
Sbjct: 218 ANSKEEKVNEKKPK 231


>gi|289523248|ref|ZP_06440102.1| membrane protein insertase, YidC/Oxa1 family [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503791|gb|EFD24955.1| membrane protein insertase, YidC/Oxa1 family [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 256

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 136/255 (53%), Gaps = 22/255 (8%)

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           M  ++++FY +  ++GIAI+L T+ +++L +PL+ KQ VS   M+ IQP++  L+EK+K 
Sbjct: 1   MLGVLNFFYEISNSYGIAIILLTILIRILLYPLSHKQLVSMKKMQQIQPRLKTLQEKYKD 60

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS---------LEMRHA 456
              Q L + +++LYK + +NP AGC P+L+Q+P+   +++VI            + ++H+
Sbjct: 61  -DRQKLNQEVMKLYKEYGVNPAAGCLPLLVQLPILILLFRVIMNYDFGEEFFVGVSLKHS 119

Query: 457 PFWGWIKDLAAADPTN--IFTLFGILPFYLPGFMHVGI------WPIIMSLSMFIQMKMS 508
                 + L A++     I T+ G +     G ++ GI        + +    + Q KM+
Sbjct: 120 LLALMSQALGASETARAGITTVLGAIASNPAGLLNFGIYGGTLLLWLGVGFVTWFQQKMT 179

Query: 509 PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM---HGAEI 564
              A   Q   +  +MP+  +F   S P G+++YW  S++I +VQQA + +     GA+ 
Sbjct: 180 TSSAASEQMAFMGWFMPLFMMFICLSLPGGVLLYWGVSSLIGVVQQAWVQRKALVEGAKK 239

Query: 565 GLIDRLRSTFSKNYN 579
            ++ + +   ++   
Sbjct: 240 PVLYKEKPRSAEKPK 254


>gi|88854496|ref|ZP_01129163.1| putative inner membrane protein translocase component YidC [marine
           actinobacterium PHSC20C1]
 gi|88816304|gb|EAR26159.1| putative inner membrane protein translocase component YidC [marine
           actinobacterium PHSC20C1]
          Length = 325

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 55/267 (20%), Positives = 112/267 (41%), Gaps = 33/267 (12%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGN-----------FGIAIMLTTVFVKLLFFPL 378
            ++   +G   +  K +   +   ++ + +           + ++I+   + V+    P+
Sbjct: 1   MDLFAFFGTLLWPIKWVIEAILVAFHTLLSAVGMDGDAGLTWVLSIVGLVLVVRAALIPV 60

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPIL 434
             +Q  S   M  + P++ ++++K+K    Q     + +  + +YK    NP + C P+L
Sbjct: 61  FVRQIKSQRRMMEVAPQLKKIQDKYKGKKDQFSREAMSRETMAMYKNAGTNPFSSCLPLL 120

Query: 435 LQIPVFFAIYKVISIS-LEMRHAPFWGWIKDL-------AAADPTNIFTLFGILPFYLPG 486
           LQ+P+FF ++ V+  + LE   A       DL       +  D   +          +P 
Sbjct: 121 LQMPIFFGLFSVLREAQLEDNPAGVGLLNADLAQSFGTSSLFDIAPLHLAISTAEGNIPV 180

Query: 487 FMHVGIWPIIMSLSMFIQMKMSP-------PPADKG--QAMILNWM-PVVFVFALSSFPA 536
            +   I  I+M+ S FI               A     Q  I+ +M P+VF F+  +FP 
Sbjct: 181 IITAVIMVILMTGSQFITQLQIMSKNQSAEMKASPMYRQQRIMLYMLPLVFAFSGFTFPL 240

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563
           G++ YW  SN  ++ QQ ++++     
Sbjct: 241 GVMFYWLVSNFWTMGQQFLVIRNMPTP 267


>gi|282848769|ref|ZP_06258164.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula
           ATCC 17745]
 gi|294792401|ref|ZP_06757548.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp.
           6_1_27]
 gi|294794207|ref|ZP_06759343.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp.
           3_1_44]
 gi|282581555|gb|EFB86943.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula
           ATCC 17745]
 gi|294454537|gb|EFG22910.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp.
           3_1_44]
 gi|294456300|gb|EFG24663.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp.
           6_1_27]
          Length = 221

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 24/211 (11%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
             ++G+AI+L T+ +K +  PL  KQ  S   M+ +QP++ +L++K+K  P + LQ  M 
Sbjct: 31  YPSYGVAIILLTIVIKAILAPLTVKQIKSMKAMQELQPRMKQLQDKYKNDPAK-LQAEMG 89

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            LYK   +NPLAGC P+L+Q+P   AIY  +       +   + W+  L   DP      
Sbjct: 90  ALYKEMGVNPLAGCLPLLVQMPFLIAIYWALKDYPYDPNFVQFLWLPSLGDPDPMY---- 145

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMILN-WMPVVFVFALS 532
                          I PI+ +LS ++  + +      A   Q  I+  +MP+   +   
Sbjct: 146 ---------------ILPILSALSTWVMSRQTSNGATGAAAQQQKIMTIFMPLFIGYISL 190

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           SFP+GL+IYW  SNV  ++QQ  I K   A+
Sbjct: 191 SFPSGLVIYWVVSNVFQLIQQHFIYKNLNAK 221


>gi|72163513|ref|YP_291170.1| hypothetical protein Tfu_3114 [Thermobifida fusca YX]
 gi|71917245|gb|AAZ57147.1| putative membrane protein [Thermobifida fusca YX]
          Length = 308

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 31/229 (13%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +G++I+L T+ V++L  PL  KQ  +   ++ +QPK+ ++RE++K    Q LQ+  I++Y
Sbjct: 32  WGLSIVLLTILVRVLMIPLFVKQMNTQRKLQELQPKLLKVRERYKNDK-QRLQQEQIKIY 90

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI------ 473
           +    NPL GC P+LLQ+PVFFA++ V+    E      +G+ ++LA +  + +      
Sbjct: 91  QESGTNPLMGCLPLLLQMPVFFALFNVLRQIAE--GEAKFGFTQELANSAQSALIFGAPI 148

Query: 474 ----------FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--------DKG 515
                        FG  P      + + +  +IM  + F+ M+ S            +  
Sbjct: 149 AAHFTSSADELAAFGADPIM--AKVIIAVACVIMGTTTFLTMRQSMSRTLKQPGMEDNPM 206

Query: 516 --QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
                I+ ++   F     + P G++IYW  SN+ ++ QQ  + +    
Sbjct: 207 VQSQKIMMYIAPAFGLFGLAMPVGVLIYWVTSNLWTMGQQHFLYRKFPP 255


>gi|163842273|ref|YP_001626678.1| inner membrane protein [Renibacterium salmoninarum ATCC 33209]
 gi|162955749|gb|ABY25264.1| inner membrane protein [Renibacterium salmoninarum ATCC 33209]
          Length = 321

 Score =  130 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 26/232 (11%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQK 413
             + ++I+   + ++    P+  KQ  +   M+ +QP++ +L+EK+K        Q + +
Sbjct: 38  WTWTLSIIGLVIVIRAALIPVFVKQIKAQRGMQALQPEMKKLQEKYKGKTDQLSRQAMAQ 97

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEMRHAPFWGWIKDLAAADP 470
             + LYK+H  NP + C PIL+Q+P FF++++V+S    + +            +   D 
Sbjct: 98  EQMALYKSHGTNPFSACLPILIQMPFFFSLFQVLSGVSKANQDGQGIGVLSHTQIQQFDD 157

Query: 471 TNIFTLFGILPFYL---------PGFMHVGIWPIIMSLSMFIQMKMSPP----------P 511
            NI        F              +   I  + M  S FI  K              P
Sbjct: 158 ANILGAPLSKAFLPQIQGGDPNVSVIVLSIIMILAMIASQFITQKQIMAKNMSEDAMASP 217

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             + Q M+L  +P+VF     +FP G++IYW+ +N+ ++ QQ  +++     
Sbjct: 218 FMRQQKMMLYILPLVFGIGGINFPIGVLIYWTTTNLWTMGQQFFVIRRMPTP 269


>gi|288555292|ref|YP_003427227.1| OxaA-like protein YidC [Bacillus pseudofirmus OF4]
 gi|298286838|sp|O87567|OXAA_BACPE RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|288546452|gb|ADC50335.1| OxaA-like protein YidC [Bacillus pseudofirmus OF4]
          Length = 252

 Score =  130 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 28/226 (12%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
            W +F   P+  ++    +L+  +FG++I++ T+ ++L   PL  KQ  S+  M+ ++P+
Sbjct: 34  IWNHFFVYPLSWVLISVADLLNGSFGLSIIVVTIGIRLFLLPLMIKQQKSSRAMQALRPE 93

Query: 396 IDELREKFKQ------SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ L++K+ Q         Q +QK ++ LYK   +NP+AGC P+ +Q+PV  A Y  I  
Sbjct: 94  MEALQKKYGQGTKRDPKDQQKMQKELMALYKDSGVNPMAGCLPLFIQLPVMMAFYFAIMR 153

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           + E+     + W  DL + DP                     I P++  ++ F+Q+KM+ 
Sbjct: 154 T-EVIALHSFLWF-DLGSPDPLY-------------------ILPVVAGITTFLQVKMTS 192

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
              +    +I+  MPV+ V A  + P+ L +YW   N+  I+Q   
Sbjct: 193 FQLNDQMKVIIYIMPVMIVVAGVTLPSALSLYWVVGNLFMIIQTYF 238


>gi|326329125|ref|ZP_08195453.1| membrane protein OxaA [Nocardioidaceae bacterium Broad-1]
 gi|325953012|gb|EGD45024.1| membrane protein OxaA [Nocardioidaceae bacterium Broad-1]
          Length = 330

 Score =  130 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 22/265 (8%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           + +     +            +    + +AI+  TV ++ L  PL  KQ  S+ NM+ +Q
Sbjct: 15  LYYAISGILLVWQKAFAYVIPSEGWQWALAIVGLTVTIRALLIPLFVKQINSSRNMQLLQ 74

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           PK+ EL++K+     + L    ++LYK    NP A C P+LLQ+P+FF +++++  + + 
Sbjct: 75  PKVRELQKKY-GHDREKLANETMKLYKDSGTNPFASCLPLLLQMPIFFVLFRMLEHASDG 133

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKM 507
                 G++ D AA +      L  +L        +   +   G   + M  + F+  + 
Sbjct: 134 IGK---GFLSDEAAHEFATSTWLGSLLSDQFTTADHTSTYFLTGFLVVAMIATTFLTQRQ 190

Query: 508 SP---PPADKG------QAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
                 PAD        Q  +L + +PVVF     +FP G I+YW+ SN+ ++ QQ  ++
Sbjct: 191 LMSKNMPADAMTGQYAQQQKLLLYVLPVVFAVGGIAFPVGTILYWTSSNLWTMGQQFYVI 250

Query: 558 KMHGAE--IGLIDRLRSTFSKNYNS 580
           + + A        +     +K    
Sbjct: 251 RNNPAPGTPAFEAKQERDKAKRRKK 275


>gi|294101695|ref|YP_003553553.1| membrane protein insertase, YidC/Oxa1 family [Aminobacterium
           colombiense DSM 12261]
 gi|293616675|gb|ADE56829.1| membrane protein insertase, YidC/Oxa1 family [Aminobacterium
           colombiense DSM 12261]
          Length = 263

 Score =  130 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 120/247 (48%), Gaps = 20/247 (8%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
             +      + +++   +NL G++GIAI+L T+ V++L  PL  KQ VS   M+ +QP++
Sbjct: 3   TLWKAAGDFILLILETLHNLTGSWGIAIILLTLAVRILLHPLTHKQMVSMQRMQKLQPRM 62

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS------ 450
             L+EK+K      L + ++ LYK + +NP AGC P+L+Q+P+   +++++         
Sbjct: 63  KMLQEKYKDDKET-LNREIMSLYKENKVNPAAGCLPLLVQLPILILLFRLLMNYNFGSVP 121

Query: 451 ----LEMRHAPFWGWIKDLAAADPTNI--FTLFGILPFYLPGFMHVGI------WPIIMS 498
               + +  +      + +A  + T I    +   +     G   VG+        +++ 
Sbjct: 122 FLGFISLEGSVLSTLAQAVALPETTKIGVMAVLSGVLANPAGLAQVGLYLGNLMLLVVVG 181

Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +  + Q +MS    +   AM+  +MP+   F   S P G+++YW  S+ + + QQ  I K
Sbjct: 182 ILTWAQQQMS-STGNPQMAMMSWFMPLFLTFICLSLPGGVLLYWGVSSFLGVAQQWWITK 240

Query: 559 MHGAEIG 565
               E+ 
Sbjct: 241 KTSQEMQ 247


>gi|269792319|ref|YP_003317223.1| 60 kDa inner membrane insertion protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269099954|gb|ACZ18941.1| 60 kDa inner membrane insertion protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 268

 Score =  130 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 68/264 (25%), Positives = 122/264 (46%), Gaps = 22/264 (8%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
             +      M   ++ FY +  ++G++I++ TV V++L  PL+ KQ VS   M+ IQP+I
Sbjct: 3   SLWSAAGDLMLRTLNLFYAITHSYGLSIIMLTVVVRILLHPLSHKQMVSMQKMQKIQPRI 62

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI------- 449
             ++EK+     ++  + ++QLY+ + +NP AGC P+L+Q+P+F  +Y+ +         
Sbjct: 63  KVIQEKYANDKEKM-NQEIMQLYRENGVNPAAGCLPLLVQLPIFILLYRALINYDFSNTS 121

Query: 450 ----SLEMRHAPFWGWIKDLAAADPTNIFTLFGILP-----FYLPGFMHVGIWPIIMSLS 500
               +L M           +++A PT    L GIL        +  +    I  +++   
Sbjct: 122 FLGVNLSMSALGAMANALGISSAKPTFTAILSGILTNPAGLANVGVYAPSVILIVLVGFL 181

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM- 559
            + Q KMS    +   A +  +MP+   F   S P G++IYW  S+ IS+ QQ  +M   
Sbjct: 182 TWYQQKMS-SGNNPQMAFMNWFMPLFMSFICLSLPGGVMIYWGASSFISVAQQKWVMMRT 240

Query: 560 ---HGAEIGLIDRLRSTFSKNYNS 580
                 +  L         K   +
Sbjct: 241 EEEMKVKPTLHKNKPEHQEKAEKT 264


>gi|323357960|ref|YP_004224356.1| preprotein translocase subunit YidC [Microbacterium testaceum
           StLB037]
 gi|323274331|dbj|BAJ74476.1| preprotein translocase subunit YidC [Microbacterium testaceum
           StLB037]
          Length = 358

 Score =  130 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 32/267 (11%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +F  +         + ++I+   + V+    PL  KQ  S   M  I P++ +++EK+
Sbjct: 25  HALFTALGMAPAAGLTWVLSIVGLVLIVRAALIPLFVKQIKSQRKMMEIAPELRKVQEKY 84

Query: 404 KQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           K    Q     + +  + LYK H   P++ C P+L+Q+P+FFA++ V++     +HA   
Sbjct: 85  KGKRDQLSREAMSRETMALYKKHGTTPVSSCLPLLVQMPIFFALFSVLNDV--SKHAASG 142

Query: 460 GWIKDLAAADPTNIF---------------TLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
                L   + T  F                     P        +    ++M  S F  
Sbjct: 143 VGGVGLLTPELTTEFYDARLFDVASMHVNLVTAWNQPDGQVTVAILLTLVVLMIASQFFT 202

Query: 505 M------KMSPPP----ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
                   +SP      A + Q ++L  +P+ F+F+   FP G++IYW  SN+ ++VQQ 
Sbjct: 203 QLQIISKNLSPEAKTGQAYQMQKVMLYILPLAFIFSGVFFPLGVVIYWFVSNLWTMVQQF 262

Query: 555 VIMKMHGAE-IGLIDRLRSTFSKNYNS 580
           V+++                 ++   +
Sbjct: 263 VVIREMPTPGSDAAKAREERLARKGKA 289


>gi|224104461|ref|XP_002313443.1| inner membrane protein [Populus trichocarpa]
 gi|222849851|gb|EEE87398.1| inner membrane protein [Populus trichocarpa]
          Length = 446

 Score =  130 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 80/355 (22%), Positives = 148/355 (41%), Gaps = 33/355 (9%)

Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318
           + +  +PS      +  +       +     +   I      SI   + +        T+
Sbjct: 11  FIATSLPSLSRHTLTTNRRFISTRIKLSLHDNIPPIHHHLDSSIDFNSIISRAEGFLYTL 70

Query: 319 HHYEKDLAIPRFEMLIDW-----GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLT 367
                 +         D      GWF FI+  M  ++          ++   +G AI+L 
Sbjct: 71  ADAAVAVDSAASTTSTDTAQKSGGWFGFISDGMEFVLKVLKDGLSAVHVPYAYGFAIILL 130

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427
           TVFVK+   PL KKQ  ST  M+N+QPKI  +++++  +  + +Q    +LY+   +NPL
Sbjct: 131 TVFVKVATLPLTKKQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLETSRLYRQAGVNPL 189

Query: 428 AGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486
           AGC+P L  IPV+  +Y+ +S  + E      + WI  L              + +  P 
Sbjct: 190 AGCFPTLATIPVWIGLYQALSNVANEGVLTEGFFWIPSLGGPTTIAARQSGSGISWLFPF 249

Query: 487 FMHVGIW-----------PIIMSLSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFVFA 530
                             P+++ +S ++ M++  PP   D  Q     +  ++P++  + 
Sbjct: 250 VDGHPPLGWNDTAAYLVLPVLLVVSQYVSMEIMKPPQTDDPTQKNTLLVFKFLPLMIGYF 309

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581
             S P+GL IYW  +NV+S  QQ  + ++ GA+  + +     + +  +K   +Q
Sbjct: 310 SLSVPSGLSIYWFTNNVLSTAQQVWLRQLGGAKPVVNENASGIITAGRAKRSAAQ 364


>gi|108712059|gb|ABF99854.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 372

 Score =  130 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 17/190 (8%)

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLA 466
            + +Q    +LYK  +++PLAGC P L+ IPV+  +Y+ +S  + E      + WI  LA
Sbjct: 36  KERIQLETARLYKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLA 95

Query: 467 AADPTN-------IFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--D 513
                        I  LF    G  P      +   + P+++ +S ++  ++  PP   D
Sbjct: 96  GPTTIAARQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNND 155

Query: 514 KGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
             Q     ++ ++P++  +   S P+GL +YW  +N++S  QQ  + K+ GA+  + + +
Sbjct: 156 PSQQGAQAVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYI 215

Query: 571 RSTFSKNYNS 580
                +   +
Sbjct: 216 DKLAKEESTN 225


>gi|323487690|ref|ZP_08092948.1| membrane protein oxaA 1 [Planococcus donghaensis MPA1U2]
 gi|323398424|gb|EGA91212.1| membrane protein oxaA 1 [Planococcus donghaensis MPA1U2]
          Length = 259

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 119/254 (46%), Gaps = 24/254 (9%)

Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367
           L         +     +   P  +    + W  FI  P+   ++YF  L+G +G  I+  
Sbjct: 7   LLISLIAVTLLLSGCTEFDQPISDQSEGF-WNEFIVWPLVSTITYFKGLLGTYGFGIIAV 65

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNI 424
           T+ ++L+  PL  KQ  S+  M+ +QP++ +L+EK+K       Q  QK M+ L++   +
Sbjct: 66  TIIIRLVMLPLMVKQTKSSKRMQEVQPELVKLKEKYKSKDAVTQQKYQKEMMALFQEKGV 125

Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484
           NP+AGC P+++Q+PV    Y  IS    M + P      DL +         F I P   
Sbjct: 126 NPMAGCLPVVIQMPVLIGFYHAISR---MNNTPEI----DLGS---------FLIFPLAE 169

Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
           P      I  +I  L  F+ ++  P   +    +++ +MPV+ +      P+ L +YW  
Sbjct: 170 PSI----ILAVIAGLMQFVVLRTGPAMDNPQMRIMMYFMPVMIIGFGIVLPSALTLYWVI 225

Query: 545 SNVISIVQQAVIMK 558
            N+IS++Q  VI +
Sbjct: 226 GNIISLIQNLVIYR 239


>gi|270289895|ref|ZP_06196121.1| membrane protein oxaA [Pediococcus acidilactici 7_4]
 gi|270281432|gb|EFA27264.1| membrane protein oxaA [Pediococcus acidilactici 7_4]
          Length = 279

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/249 (22%), Positives = 113/249 (45%), Gaps = 29/249 (11%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
            +      ++        N+G  I++ TV ++++  PL   Q  ++     +QPK+ EL+
Sbjct: 40  IVYNFSKFIIYLSKICGNNYGWGIIVFTVLIRIIILPLMIYQTKTSMKTAELQPKLKELQ 99

Query: 401 EKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +K+        Q L++   +LY    +NP+AGC P+++Q+PV +A+Y  +S +  ++   
Sbjct: 100 QKYSSRDVETQQKLREEQQKLYAEAGVNPMAGCLPLIIQLPVMYALYAAVSRTQVLK-EG 158

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS----LSMFIQMKMSPPPAD 513
            + W++ L   DP                     I PI+ +    LS ++ MK  P  A 
Sbjct: 159 TFLWLQ-LNDKDPYY-------------------ILPILAAFFTFLSTWLSMKAQPAGAQ 198

Query: 514 KGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
            G    + + MP++ +    +FPA + +YW  +N+  + Q  VI      +     +L++
Sbjct: 199 NGMTSAMTFGMPLIILITALNFPAAITLYWVVTNLFQVGQTLVIQNPFKIQKERQAKLQA 258

Query: 573 TFSKNYNSQ 581
             +K    +
Sbjct: 259 EKAKRKAIE 267


>gi|34763009|ref|ZP_00143985.1| 60 kDa inner membrane protein YIDC [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|237741004|ref|ZP_04571485.1| inner membrane protein YIDC [Fusobacterium sp. 4_1_13]
 gi|256846682|ref|ZP_05552138.1| inner membrane protein YIDC [Fusobacterium sp. 3_1_36A2]
 gi|294784389|ref|ZP_06749680.1| stage III sporulation protein J [Fusobacterium sp. 3_1_27]
 gi|27887310|gb|EAA24404.1| 60 kDa inner membrane protein YIDC [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|229431048|gb|EEO41260.1| inner membrane protein YIDC [Fusobacterium sp. 4_1_13]
 gi|256717902|gb|EEU31459.1| inner membrane protein YIDC [Fusobacterium sp. 3_1_36A2]
 gi|294487961|gb|EFG35316.1| stage III sporulation protein J [Fusobacterium sp. 3_1_27]
          Length = 205

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 115/221 (52%), Gaps = 22/221 (9%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  + +    L++     VGNFGI+I++ T+ +K+L  PL  KQ  S   MK +QP++++
Sbjct: 5   YNLLQQFFAFLLNTTDKYVGNFGISIIVVTILIKILLLPLTLKQDKSMKEMKKLQPELEK 64

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +++K+     Q+L    ++LY+ H +NPL GC PIL+Q+P+ FA++ V+   +  + +  
Sbjct: 65  IKQKYANDK-QMLNIKTMELYREHKVNPLGGCLPILIQLPILFALFGVLRNGIIPKDSS- 122

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W+K L   DP                     I P++     F+Q K+     +     
Sbjct: 123 FLWMK-LVDPDPFY-------------------ILPVLNGAVSFLQQKLMGTSDNPQMKN 162

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           ++   P++ +      P+GL +YW  S+++++VQQ  IMK 
Sbjct: 163 MMFVFPILMIVISYRMPSGLQLYWLTSSILAVVQQYFIMKK 203


>gi|167462794|ref|ZP_02327883.1| 60 kDa inner membrane insertion protein [Paenibacillus larvae
           subsp. larvae BRL-230010]
 gi|322381370|ref|ZP_08055373.1| OxaA-like protein precursor [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321154946|gb|EFX47217.1| OxaA-like protein precursor [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 271

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 115/226 (50%), Gaps = 22/226 (9%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           YFI    + L  +      ++GI+I++ T+ ++ +  PL  KQY S+  M+ IQP+I +L
Sbjct: 39  YFIYPLSWSLDWFAGVFGNSYGISILILTIIIRFIVLPLTLKQYRSSKRMQEIQPEIKKL 98

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           ++K+K +P Q  Q+  ++L++ H +NPLAGC P+L+Q+P+  A+Y+ I  +  +R    +
Sbjct: 99  QQKYKDNP-QKQQEETMKLFQQHGVNPLAGCLPLLIQMPILIALYQAIMRNDAIR-EHTF 156

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            W++ L A D                      I P+I +++ ++Q K      ++    +
Sbjct: 157 LWLQ-LGAKDDYY-------------------ILPLIAAITTYLQQKTMSAQMNQQMKSM 196

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           L   PV+      SF + L +YW +SN+ +I Q   +      +  
Sbjct: 197 LFIFPVLIFVMSMSFASALPLYWIYSNLFTIAQNYFLYGRDNRKKK 242


>gi|227878344|ref|ZP_03996301.1| stage III sporulation protein J [Lactobacillus crispatus JV-V01]
 gi|227862080|gb|EEJ69642.1| stage III sporulation protein J [Lactobacillus crispatus JV-V01]
          Length = 296

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 114/256 (44%), Gaps = 23/256 (8%)

Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381
               A P      +W   + +      ++     +  ++G AI++ TV V+++  PL   
Sbjct: 39  ANGQATPISHTSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTVIVRVILVPLNAI 98

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIP 438
              ST  M++IQP+I+ELR+K+     +     Q+   +LYK   +NP  GC P+L+Q+P
Sbjct: 99  SIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLP 158

Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           V +A+Y  I  + ++     + W+ DL+  DP  I  +  ++  +               
Sbjct: 159 VMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAMIFTF--------------- 201

Query: 499 LSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           LS +I    +P  +  G   ++ + M ++      +F + + +YW  SN+   +Q  ++ 
Sbjct: 202 LSTYISQLSTPKSSQNGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQALQTFILQ 261

Query: 558 KMHGAEIGLIDRLRST 573
             +  +       ++ 
Sbjct: 262 --NPIKYRREQEAKAE 275


>gi|117929365|ref|YP_873916.1| 60 kDa inner membrane insertion protein [Acidothermus
           cellulolyticus 11B]
 gi|117649828|gb|ABK53930.1| 60 kDa inner membrane insertion protein [Acidothermus
           cellulolyticus 11B]
          Length = 315

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 32/233 (13%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +G++++L TV V++L FPL  KQ  S   M  + PK+ EL+ K+K    + L    + LY
Sbjct: 35  WGLSVVLLTVIVRILLFPLFVKQVRSQRAMTELAPKLKELQAKYKN-DRERLGTETMALY 93

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA-------PFWGWIKDLAA----- 467
           + H +NP  GC PIL Q PVF+A++ V+    +   +       P +GW   L       
Sbjct: 94  REHGVNPFMGCLPILAQAPVFYALFHVLRYVSDHGSSKPPAGFHPEYGWTVSLLQSAGHA 153

Query: 468 ----------ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK----MSPPPAD 513
                         +   +FG     +     + I    M+ + F+  +     +    +
Sbjct: 154 KVFGVPLALGFRTADRAPMFGADSTTVHVVTLLAILA--MATTTFLTQRQLIVKNAAAGN 211

Query: 514 KG--QAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
               Q  +L + +P +F  +   +  G+++YW  SN+ S+ QQ  I++    +
Sbjct: 212 PMAQQQKMLLYVLPPIFALSGLLWQMGVLVYWVTSNLWSLGQQHYIIRTMPIK 264


>gi|294500761|ref|YP_003564461.1| membrane protein OxaA [Bacillus megaterium QM B1551]
 gi|295706106|ref|YP_003599181.1| membrane protein OxaA [Bacillus megaterium DSM 319]
 gi|294350698|gb|ADE71027.1| membrane protein OxaA [Bacillus megaterium QM B1551]
 gi|294803765|gb|ADF40831.1| membrane protein OxaA [Bacillus megaterium DSM 319]
          Length = 272

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 109/226 (48%), Gaps = 26/226 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           YF+      L        G++G++I++ TV ++L+  PL  KQ  ST  M+ ++P+++++
Sbjct: 41  YFVYPLSMALTKIAEWAGGSYGLSIIIATVIIRLVLLPLILKQQKSTMAMQALRPEMEKI 100

Query: 400 REKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           ++K+        Q+   +    LY+TH INP+ GC PI +Q+P+  A Y  I+ + E+  
Sbjct: 101 QKKYAGKKDPETQQKQQKEMMQLYQTHKINPVGGCLPIFIQMPIIIAFYNAIARTHEIAQ 160

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-PADK 514
              + W+  L   DP                     I P++ +++ F+Q+++S       
Sbjct: 161 HS-FLWVS-LGKPDPYF-------------------ILPVVAAITTFLQIRVSMTDEIQP 199

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
              M++N MP+  + A  S P+ L +YW   N+  I Q   + K  
Sbjct: 200 PMKMMMNIMPIFILVAGISLPSALALYWVIGNLFGIGQGYYLKKRM 245


>gi|323141441|ref|ZP_08076331.1| stage III sporulation protein J [Phascolarctobacterium sp. YIT
           12067]
 gi|322414097|gb|EFY04926.1| stage III sporulation protein J [Phascolarctobacterium sp. YIT
           12067]
          Length = 214

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 30/230 (13%)

Query: 339 FYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
             F+A  +  +++  YN      + N G+AI+L T+ +KL+ +PL +KQ  ST  M  IQ
Sbjct: 1   MDFLANIVQQVLTVLYNFTESVGIPNLGLAIVLMTIIIKLIMYPLTQKQIQSTKAMMEIQ 60

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           PK+  L+EK+K    Q L   +  LYK+  +NPLAGC P+L+Q+P+   I+  I      
Sbjct: 61  PKMKALQEKYKDDK-QRLNMELANLYKSEGVNPLAGCLPLLIQMPIMIGIFYGIRDYNYA 119

Query: 454 RH---APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
            H      + W+ D++ ADPT                    + P++ +L+ FIQ K + P
Sbjct: 120 AHPEIVTSFLWLADISKADPTY-------------------VLPVLSALTTFIQTKQTMP 160

Query: 511 P--ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                    M++ +MP+   +   +FPAGL++YW   N++ I QQ+++ +
Sbjct: 161 ANGGGAQNKMMMYFMPLFIGYISLTFPAGLVLYWVVMNIMQIAQQSIMNR 210


>gi|262038129|ref|ZP_06011530.1| stage III sporulation protein J [Leptotrichia goodfellowii F0264]
 gi|261747853|gb|EEY35291.1| stage III sporulation protein J [Leptotrichia goodfellowii F0264]
          Length = 224

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 68/219 (31%), Positives = 119/219 (54%), Gaps = 19/219 (8%)

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
            +  ++     +VGN+GIAI++ T+ V++L FPL  KQ  S   M+ +QP++D+L+EK+K
Sbjct: 17  LVVTILKAINGIVGNYGIAIIIVTIIVRILIFPLTLKQEKSMKRMRELQPQLDKLKEKYK 76

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
               Q+LQ+  +++YK +N+NPL GC PIL+Q+P+F A++   S    + +   + W   
Sbjct: 77  D-DQQMLQQKTMEIYKENNVNPLGGCLPILIQMPIFIALFYAFSGD-AIPNDATFLWFH- 133

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-----DKGQAMI 519
           L   D       F            V + PI+ ++  F Q KM   P+     +     +
Sbjct: 134 LKHPDNLFKIGTF-----------AVNLLPILNTVVTFFQQKMMSGPSKEQGVNSQMQSM 182

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +  MP++ +    + P+G+ +Y+  S V+S+ QQ +IMK
Sbjct: 183 MYTMPILMLVLFYNMPSGVTLYYLVSGVLSVAQQYIIMK 221


>gi|257070288|ref|YP_003156543.1| preprotein translocase subunit YidC [Brachybacterium faecium DSM
           4810]
 gi|256561106|gb|ACU86953.1| preprotein translocase subunit YidC [Brachybacterium faecium DSM
           4810]
          Length = 366

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 29/247 (11%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK----AM 415
           +  +I+  TV V+ L  PL  +Q  ++ +M+ + P++  +++K+K    Q  ++      
Sbjct: 34  WVFSIVGLTVVVRTLIIPLFVRQIRASRSMQMVSPELQAVQKKYKGKTDQESRQKMAEET 93

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL--EMRHAPFWGWIKDL--AAADPT 471
           + +YK    +P + C P+LLQ+P+FF +++V+   L      APF     +L  +A   T
Sbjct: 94  MAIYKEAGASPFSSCLPVLLQMPIFFGLFRVLFYKLPEAADGAPFGPLSTELARSARSST 153

Query: 472 NIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMK----MSPP------PADKG 515
            +  +     F  PG       +  GI    M    F   K     + P      P    
Sbjct: 154 ILGDVTIANSFLKPGDGGTVTMVLAGIIIACMCAVTFFTQKSLTMKNMPKASLEGPMAST 213

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG-----AEIGLIDRL 570
           Q M+L  +P ++V      P G++IYW  +NV +  QQA++++        AE     R+
Sbjct: 214 QKMMLYMLPFIYVITGPGMPIGVLIYWLTTNVWTFGQQAIVIRATPTPGSDAEKERQARI 273

Query: 571 RSTFSKN 577
            +   K 
Sbjct: 274 NAKREKK 280


>gi|260893979|ref|YP_003240076.1| membrane protein insertase, YidC/Oxa1 family [Ammonifex degensii
           KC4]
 gi|260866120|gb|ACX53226.1| membrane protein insertase, YidC/Oxa1 family [Ammonifex degensii
           KC4]
          Length = 231

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 23/205 (11%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           V N+G+AI++ T+ V+L+ FPL  +Q  S   ++ + PKI EL+E++ +  PQ LQ+ ++
Sbjct: 28  VPNYGLAIIMLTILVRLVLFPLNYRQMRSVVALQQLHPKIKELQERY-KQDPQKLQQKLM 86

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFT 475
           +LY+ HN+NP+AGC P+L+Q+P+  A+Y+ +      +     + W+  L+  DP     
Sbjct: 87  ELYREHNVNPMAGCLPLLIQLPILIALYRALLSFPYTVAEHARFLWVPSLSHTDPYF--- 143

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN--WMPVVFVFALSS 533
                           I P++  ++ + QMK++P  A + Q   +    M  + ++  ++
Sbjct: 144 ----------------ILPVLAGVTTYWQMKITPQAAGQEQQQRMMGILMSGMILWISAT 187

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558
            PAGL +YW   N+IS+ QQ    K
Sbjct: 188 LPAGLALYWVVYNLISVAQQYFFNK 212


>gi|224107717|ref|XP_002314575.1| 60 kDa inner membrane protein [Populus trichocarpa]
 gi|222863615|gb|EEF00746.1| 60 kDa inner membrane protein [Populus trichocarpa]
          Length = 292

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 69/231 (29%), Positives = 115/231 (49%), Gaps = 18/231 (7%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           +L   +G AI+L TV VK   FPL+KKQ  S   M+++QP+I  +++++     + +Q  
Sbjct: 57  HLPYAYGFAIILLTVLVKAATFPLSKKQVESAMAMRSLQPQIKAIQQRYAG-DQERIQLE 115

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAA----- 468
             +LYK   INPLAGC P L  IPV+  +Y+ +S  + E      + WI  LA       
Sbjct: 116 TARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTAIAS 175

Query: 469 --DPTNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFI--QMKMSPPPADKG---QA 517
             + + I  LF    G  P      +   + P+++ +S +I  Q+  S    D       
Sbjct: 176 RQNGSGISWLFPFVDGHPPLGWSDTVAYLVLPVMLVVSQYISVQIMQSSQSDDPNVKNSQ 235

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
            I  ++P++  +   S P+GL +YW  +N++S  QQ  + K  GA+  ++ 
Sbjct: 236 AITKFLPLMIGYFSLSVPSGLSLYWLTNNILSTAQQVWLQKSGGAKNPMMK 286


>gi|260890876|ref|ZP_05902139.1| stage III sporulation protein J [Leptotrichia hofstadii F0254]
 gi|260859429|gb|EEX73929.1| stage III sporulation protein J [Leptotrichia hofstadii F0254]
          Length = 228

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 115/222 (51%), Gaps = 19/222 (8%)

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           +   +  +++  Y +VGN+G+AI++ T+ ++++ FPLA KQ  +   MK +QP++++++E
Sbjct: 7   LVDFVVHVLNAIYGVVGNYGVAIIIVTILMRIIVFPLALKQEKAMKKMKELQPELEKIKE 66

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           K+K +P Q  Q+   +LY+    NPLAGC P+L+Q+PVF A+Y   S +     A  + W
Sbjct: 67  KYKDNP-QEYQRKTAELYRESGANPLAGCLPLLIQMPVFVALYWAFSGNAIPADA-KFLW 124

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-----DKGQ 516
              L   D       F              + PI+  +  +IQ K+           +  
Sbjct: 125 FT-LKQPDRLFTIGKF-----------AFNLLPILNVVITYIQQKIMTDATKGQEGSQQM 172

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
             +L  MP + +    + P+G+ +Y+  S   S+VQQ +I+K
Sbjct: 173 QTMLYMMPALMLVIFYNMPSGVTLYYLVSGAWSVVQQYIILK 214


>gi|152977287|ref|YP_001376804.1| OxaA-like protein precursor [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152026039|gb|ABS23809.1| 60 kDa inner membrane insertion protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 257

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 71/236 (30%), Positives = 121/236 (51%), Gaps = 30/236 (12%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  L+ + ++ +   +FG+AI+L T+ V+    PLA  QY S   MK +QP
Sbjct: 36  IWDHYFVYPISFLLQFAHDHIAGGSFGVAIILITLLVRSAMIPLAISQYRSQMKMKQMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++  L++K+          +  QK M +L K+   NPLAGC PIL+Q+P+F A+Y  IS 
Sbjct: 96  ELQRLKDKYGDVSKDIEKQKEYQKEMSKLMKSGGWNPLAGCLPILIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           + E+R    + W+ +L  ADP                     I P++ + + F+QMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYY-------------------ILPMLAAFTTFLQMKVMQ 194

Query: 510 PPADKGQA-MILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
              D+ Q   I  +M P + +F   + P+GL++YW   N  +++Q  ++ K    E
Sbjct: 195 TSKDQVQMLKIQQFMMPAMILFMGFAAPSGLVLYWVTGNTFTMMQTIILRKFMEHE 250


>gi|51894472|ref|YP_077163.1| SpoIIIJ [Symbiobacterium thermophilum IAM 14863]
 gi|51858161|dbj|BAD42319.1| SpoIIIJ [Symbiobacterium thermophilum IAM 14863]
          Length = 249

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 116/226 (51%), Gaps = 23/226 (10%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           ++  +    ++ +PM  L+  F    GN+G+AI+L TV V+++  PL   Q  S   M+ 
Sbjct: 28  LITSFLVPEWLVQPMTKLLEVFLKWTGNYGLAIILLTVVVRIVILPLTVYQMRSMKRMQE 87

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +QP + EL++K+K +P + L + ++ LY+   +NP +GC P+L+Q+P+ +A++ V +   
Sbjct: 88  VQPLMKELQDKYKDNPEK-LNQELMALYQREKVNPFSGCLPLLVQLPILYALFAVFN--- 143

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PP 510
                          A DPT  F       +       +    I+  +SM +Q  ++  P
Sbjct: 144 ---------------AFDPTK-FNYTYQFLWADLSQRDIP-LAILTVVSMILQQYLTGMP 186

Query: 511 PADKGQAMILNWMPVVFVFALSSFP-AGLIIYWSWSNVISIVQQAV 555
             D  Q +++  MP++F +   + P + +++YW  S    ++QQA+
Sbjct: 187 TTDPNQRVMMWIMPIMFGWIAFTMPTSSIVLYWVVSTFFGLIQQAI 232


>gi|332296665|ref|YP_004438588.1| membrane protein insertase, YidC/Oxa1 family [Thermodesulfobium
           narugense DSM 14796]
 gi|332179768|gb|AEE15457.1| membrane protein insertase, YidC/Oxa1 family [Thermodesulfobium
           narugense DSM 14796]
          Length = 214

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 71/233 (30%), Positives = 118/233 (50%), Gaps = 26/233 (11%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           ++  + +F       +     + + +FG+ I+L T+ ++ L +PL          M+ +Q
Sbjct: 1   MNSFFSWFDTNVFHPIFYSLLSFLHDFGLVIILITLLIRALLWPLNHISLDQMKKMQKLQ 60

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS--- 450
           PKI EL+EK+ +S PQ LQ  M+  YK + INP  GC P+L+Q+P+  A Y  +      
Sbjct: 61  PKIKELQEKY-KSDPQRLQTEMVAFYKNNKINPFGGCLPMLIQLPILIAFYYFLLSPELK 119

Query: 451 --LEMRH-APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             +E  H A  + WI D+   DP                     I P ++ ++ +IQ K+
Sbjct: 120 SIIEQTHSAVNFLWINDITEKDPFY-------------------ILPALLMITTYIQQKI 160

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
           +   AD+ Q  +L  MP+   F    FPAG++IYW+ SN+I I+Q  ++M+ H
Sbjct: 161 TTNTADRMQRQMLLIMPLFLGFISIQFPAGILIYWNVSNIIGIIQSFIVMRKH 213


>gi|19703356|ref|NP_602918.1| inner membrane protein [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296328798|ref|ZP_06871312.1| stage III sporulation protein J [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|38503076|sp|Q8RHA4|OXAA_FUSNN RecName: Full=Inner membrane protein oxaA
 gi|19713418|gb|AAL94217.1| Inner membrane protein [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296154133|gb|EFG94937.1| stage III sporulation protein J [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 205

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 60/221 (27%), Positives = 116/221 (52%), Gaps = 22/221 (9%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  + + +  L++     VGNFGI+I++ T+ +K++  PL  KQ  S   MK +QP++++
Sbjct: 5   YNLLKQFLAFLLNTTDKYVGNFGISIIIVTILIKIILLPLTLKQDKSMKEMKKLQPELEK 64

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +++K+     Q+L    ++LY+ H +NPL GC PIL+Q+P+ FA++ V+   + +     
Sbjct: 65  IKQKYANDK-QMLNIKTMELYREHKVNPLGGCLPILVQLPILFALFGVLRSGI-IPADSS 122

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W++ LA  DP                     + P++     F+Q K+     +     
Sbjct: 123 FLWMR-LADPDPFY-------------------VLPVLNGAVSFLQQKLMGTSDNAQMKN 162

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           ++   P++ +      P+GL +YW  S++I+++QQ  IMK 
Sbjct: 163 MMYVFPIMMIVISYRMPSGLQLYWLTSSLIAVIQQYFIMKK 203


>gi|295425822|ref|ZP_06818503.1| ParB/SpoJ family partitioning protein [Lactobacillus amylolyticus
           DSM 11664]
 gi|295064515|gb|EFG55442.1| ParB/SpoJ family partitioning protein [Lactobacillus amylolyticus
           DSM 11664]
          Length = 296

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/257 (22%), Positives = 108/257 (42%), Gaps = 21/257 (8%)

Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384
              P      +W   + I      L+     +  N+G+ I++ T+ V+++  PL      
Sbjct: 43  HQAPVSHTSGNWWDRWIIYYVSAFLLWLAKLMGNNYGVTIIVFTILVRIILLPLNAISIR 102

Query: 385 STANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
           S+  M+ IQP++D LR+K+        Q+L +   +LYK   +NP  GC P+L+Q+PV +
Sbjct: 103 SSTKMQQIQPQVDALRKKYPGRDTESRQLLSQETNKLYKEAGVNPYTGCLPLLIQLPVMY 162

Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501
           A+Y  I  + ++     + W+ DL   DP  I  +  +               +   LS 
Sbjct: 163 ALYMAILRTPQL-QNGHFLWM-DLGKPDPYYIMPILAM---------------VFTFLST 205

Query: 502 FIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
           +I    +P  A  G    + + M ++       F + + +YW  SN+   VQ   +    
Sbjct: 206 YISQISTPKSAQNGMTKFMTYGMSIMVGAVAIGFQSAITLYWVISNLFQAVQTFFLQNPI 265

Query: 561 GAEIGLIDRLRSTFSKN 577
             +     ++ +   + 
Sbjct: 266 KYKREQEAKVTAERERK 282


>gi|256843834|ref|ZP_05549321.1| stage III sporulation protein J [Lactobacillus crispatus 125-2-CHN]
 gi|256849611|ref|ZP_05555043.1| stage III sporulation protein J [Lactobacillus crispatus MV-1A-US]
 gi|262046279|ref|ZP_06019242.1| stage III sporulation protein J [Lactobacillus crispatus MV-3A-US]
 gi|295693884|ref|YP_003602494.1| stage iii sporulation protein j [Lactobacillus crispatus ST1]
 gi|312984010|ref|ZP_07791358.1| membrane protein OxaA [Lactobacillus crispatus CTV-05]
 gi|256613739|gb|EEU18941.1| stage III sporulation protein J [Lactobacillus crispatus 125-2-CHN]
 gi|256713727|gb|EEU28716.1| stage III sporulation protein J [Lactobacillus crispatus MV-1A-US]
 gi|260573609|gb|EEX30166.1| stage III sporulation protein J [Lactobacillus crispatus MV-3A-US]
 gi|295031990|emb|CBL51469.1| Stage III sporulation protein J [Lactobacillus crispatus ST1]
 gi|310894512|gb|EFQ43586.1| membrane protein OxaA [Lactobacillus crispatus CTV-05]
          Length = 291

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 114/256 (44%), Gaps = 23/256 (8%)

Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381
               A P      +W   + +      ++     +  ++G AI++ TV V+++  PL   
Sbjct: 34  ANGQATPISHTSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTVIVRVILVPLNAI 93

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIP 438
              ST  M++IQP+I+ELR+K+     +     Q+   +LYK   +NP  GC P+L+Q+P
Sbjct: 94  SIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLP 153

Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           V +A+Y  I  + ++     + W+ DL+  DP  I  +  ++  +               
Sbjct: 154 VMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAMIFTF--------------- 196

Query: 499 LSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           LS +I    +P  +  G   ++ + M ++      +F + + +YW  SN+   +Q  ++ 
Sbjct: 197 LSTYISQLSTPKSSQNGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQALQTFILQ 256

Query: 558 KMHGAEIGLIDRLRST 573
             +  +       ++ 
Sbjct: 257 --NPIKYRREQEAKAE 270


>gi|254302384|ref|ZP_04969742.1| inner membrane protein YidC [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322576|gb|EDK87826.1| inner membrane protein YidC [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 205

 Score =  128 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 116/221 (52%), Gaps = 22/221 (9%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  + + +  L++     VGNFGI+I++ T+ +K+L  PL  KQ  S   MK +QP++++
Sbjct: 5   YNLLKQFLAFLLNTTDKYVGNFGISIIIVTILIKILLLPLTLKQDKSMKEMKKLQPELEK 64

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +++K+     Q+L    ++LY+ H +NPL GC PIL+Q+P+ FA++ V+   + +     
Sbjct: 65  IKQKYANDK-QMLNIKTMELYREHKVNPLGGCLPILVQLPILFALFGVLRSGI-IPTDSS 122

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W+K L+  DP                     I P++     F+Q K+     +     
Sbjct: 123 FLWMK-LSEPDPFF-------------------ILPVLNGAVSFLQQKLMGTSDNAQMKN 162

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           ++   P++ +      P+GL +YW  S++I+++QQ  IMK 
Sbjct: 163 MMYVFPIMMIVISYKMPSGLQLYWLTSSLIAVIQQYFIMKK 203


>gi|229917458|ref|YP_002886104.1| 60 kDa inner membrane insertion protein [Exiguobacterium sp. AT1b]
 gi|229468887|gb|ACQ70659.1| 60 kDa inner membrane insertion protein [Exiguobacterium sp. AT1b]
          Length = 286

 Score =  128 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 71/229 (31%), Positives = 112/229 (48%), Gaps = 26/229 (11%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
               +F +    +   ++Y       +GI+I++ T+ V+LL  PL  KQ  S   M+ +Q
Sbjct: 41  FWAKYFVWPLAWLLKEVAYLVGGPWQYGISIIIATIIVRLLILPLMIKQTKSMGAMQVLQ 100

Query: 394 PKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P++ +LREK+        + LQ+ M++LY+ + INPLAGC PIL+Q+P+ FA Y  I  +
Sbjct: 101 PEMLKLREKYSSKDQETQRKLQEEMMKLYQEYQINPLAGCLPILIQMPILFAFYDAIRRT 160

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
            E+  A  + W  DL A DPT                    + PI+ ++  F Q K+S  
Sbjct: 161 PEIFEA-NFLWF-DLGAPDPTF-------------------VLPILAAILTFAQQKISMA 199

Query: 511 PA--DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
               +    M+L   PV+      + PA L +YW    +ISI+    IM
Sbjct: 200 GQEQNPQLKMMLYIFPVMIFVMSINLPAALSLYWVVGYIISIIVTMAIM 248


>gi|237752891|ref|ZP_04583371.1| inner membrane protein oxaA [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375158|gb|EEO25249.1| inner membrane protein oxaA [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 418

 Score =  128 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 88/441 (19%), Positives = 164/441 (37%), Gaps = 33/441 (7%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
                 +A+ L+++    +  FY    +E       N     +        A   +    
Sbjct: 10  SQARIMIAVVLALVFFIPYSYFYQPNSLENNATIVNNDMVKLESTPKAQDVALANVLPTN 69

Query: 63  QALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
            +   S  +  ++    I  I+  G +   + L+        +S  ++L S         
Sbjct: 70  MSSEDSAIIATIEAEGFIYKIDKLG-RIAIVELKE--EKYHKDSKPLSLFSNDVASQTNP 126

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181
             L+   + + +     N+ ++  +  ++   +P  L               L+   + K
Sbjct: 127 KILEIRFSDSVLNNQALNSPYSASANHLVLTDSPQSLTLTQE----------LNGLKVQK 176

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
           ++    N         P+  I    P    N       F   +  ++       +   + 
Sbjct: 177 VLTFYPNGYYKATIKIPQNYIYFVSPGMRPNVENDAYVFKGAIIKEADDTITTIEDGDAQ 236

Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301
                 +   L   D+Y+ ++F   K  +         D                  G +
Sbjct: 237 GQLNFANAKILAAVDRYYTTLFFNDKGFNATILSNANED-------------PMPFIGGN 283

Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361
                  + G K +  +   +     P    ++++G   F AKP+F+L+   Y+  GN+G
Sbjct: 284 GELVLEGYIGPKNYRLLESID-----PFLTDVVEYGVITFFAKPLFLLLEKLYDFCGNWG 338

Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421
            AI+L T+ V+++ +PL  K  VS   +K + PK+ EL++K+K   PQ LQ  M+ LYK 
Sbjct: 339 WAIILLTLIVRIVLYPLTYKGMVSMQKLKELAPKMKELQQKYKG-EPQKLQVHMMDLYKK 397

Query: 422 HNINPLAGCWPILLQIPVFFA 442
           H  NP+ GC P+LLQIPVFFA
Sbjct: 398 HGANPMGGCLPLLLQIPVFFA 418


>gi|227508124|ref|ZP_03938173.1| inner membrane insertion protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227511149|ref|ZP_03941198.1| inner membrane insertion protein [Lactobacillus buchneri ATCC
           11577]
 gi|227523336|ref|ZP_03953385.1| inner membrane insertion protein [Lactobacillus hilgardii ATCC
           8290]
 gi|227085631|gb|EEI20943.1| inner membrane insertion protein [Lactobacillus buchneri ATCC
           11577]
 gi|227089527|gb|EEI24839.1| inner membrane insertion protein [Lactobacillus hilgardii ATCC
           8290]
 gi|227192353|gb|EEI72420.1| inner membrane insertion protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 278

 Score =  128 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 27/262 (10%)

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
             P  E        + +      ++        N+G+ I++ T+ V+++  PL   Q  S
Sbjct: 26  NSPITEHSTGIWDGWVVLNFSRAIIWLSKFFSDNYGMGIIIFTILVRIVILPLMIYQTRS 85

Query: 386 TANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
               + +QP++  L++K+        Q LQ    +LY    INPLAGC P+++Q+P+ FA
Sbjct: 86  MRKTQEVQPQLKALQKKYSSRDAETMQKLQAEQKKLYAEAGINPLAGCLPMIVQMPILFA 145

Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           +Y+ I  +  +R +  + W++ L   DP                   + + P++ +L  F
Sbjct: 146 LYQAIWRTDILR-SGTFFWLQ-LGHPDP-------------------IFVLPVLAALFTF 184

Query: 503 IQMKMSP--PPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           I   ++    P       ++   MP+  +    S P+ L +YW  +N   + Q  VI   
Sbjct: 185 ISSWLAMKGQPESNSMTTMMTIGMPIFILIMAVSLPSALSLYWVITNAFQVGQTLVIQNP 244

Query: 560 HGAEIGLIDRLRSTFSKNYNSQ 581
                    + +         Q
Sbjct: 245 WKIRREREQKQKEEREHKRAVQ 266


>gi|293380888|ref|ZP_06626924.1| putative stage III sporulation protein J [Lactobacillus crispatus
           214-1]
 gi|290922561|gb|EFD99527.1| putative stage III sporulation protein J [Lactobacillus crispatus
           214-1]
          Length = 291

 Score =  128 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 114/256 (44%), Gaps = 23/256 (8%)

Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381
               A P      +W   + +      ++     +  ++G AI++ TV V+++  PL   
Sbjct: 34  ANGQATPISHTSGNWWDRWIVYYMSAFILGLAKLMGNSYGWAIIVFTVIVRVILVPLNAI 93

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIP 438
              ST  M++IQP+I+ELR+K+     +     Q+   +LYK   +NP  GC P+L+Q+P
Sbjct: 94  SIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLP 153

Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           V +A+Y  I  + ++     + W+ DL+  DP  I  +  ++  +               
Sbjct: 154 VMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAMIFTF--------------- 196

Query: 499 LSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           LS +I    +P  +  G   ++ + M ++      +F + + +YW  SN+   +Q  ++ 
Sbjct: 197 LSTYISQLSTPKSSQNGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQALQTFILQ 256

Query: 558 KMHGAEIGLIDRLRST 573
             +  +       ++ 
Sbjct: 257 --NPIKYRREQEAKAE 270


>gi|228993751|ref|ZP_04153656.1| Membrane protein oxaA 2 [Bacillus pseudomycoides DSM 12442]
 gi|228765962|gb|EEM14611.1| Membrane protein oxaA 2 [Bacillus pseudomycoides DSM 12442]
          Length = 260

 Score =  128 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 33/244 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLT--TVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           W ++   P+ +++ +  + V      I +   T+ ++    PLA  QY S   MK +QP+
Sbjct: 37  WDHYFVYPISLMLQFVAHHVPGGSFGIAIIIITLVIRSAMIPLAVSQYRSQMKMKKMQPQ 96

Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           I +L+EK           +  QK M +L KT   NPLAGC P+L+Q+P+F A+Y  IS +
Sbjct: 97  IQKLKEKHGNVSKDIEKQKQYQKEMSELMKTGGWNPLAGCLPLLIQMPIFSALYYAISRT 156

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
            E+R    + W+ +L  ADP +                   I PI+ +L+ FIQMK+   
Sbjct: 157 EEIR-TSSFLWV-NLGHADPYH-------------------ILPILAALATFIQMKVMQS 195

Query: 511 PADKGQAMILN-----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
               G+ + +       MP + +F   + P+GL++YW   N+ +++Q  V+ K+   E G
Sbjct: 196 NVTPGEQVQMLKVQQFMMPAMILFMGFAAPSGLVLYWITGNIFTMLQTIVLRKVMDREEG 255

Query: 566 LIDR 569
            +  
Sbjct: 256 QLQN 259


>gi|237743156|ref|ZP_04573637.1| inner membrane protein oxaA [Fusobacterium sp. 7_1]
 gi|256027563|ref|ZP_05441397.1| inner membrane protein [Fusobacterium sp. D11]
 gi|260495364|ref|ZP_05815491.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_33]
 gi|289765522|ref|ZP_06524900.1| inner membrane protein [Fusobacterium sp. D11]
 gi|229433452|gb|EEO43664.1| inner membrane protein oxaA [Fusobacterium sp. 7_1]
 gi|260197142|gb|EEW94662.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_33]
 gi|289717077|gb|EFD81089.1| inner membrane protein [Fusobacterium sp. D11]
          Length = 201

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 63/221 (28%), Positives = 117/221 (52%), Gaps = 22/221 (9%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
             +I + +  L++     VGNFGI+I++ T+ +K+L  PL  KQ  S   MK +QP++++
Sbjct: 1   MSYIRQFLAFLLNTTDKYVGNFGISIIIVTIIIKILLLPLTLKQDKSMKEMKKLQPELEK 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +++K+     Q+L    ++LY+ H +NPL GC PIL+Q+P+ +A++ V+   +  + +  
Sbjct: 61  IKQKYANDK-QMLNIKTMELYREHKVNPLGGCLPILIQLPILWALFGVLRSGIIPKDSS- 118

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W++ LA  DP                     I P++     F+Q K+     +     
Sbjct: 119 FLWMR-LADPDPFY-------------------ILPVLNGAVSFLQQKLMGTSDNAQMKN 158

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           ++   P++ +      P+GL IYW  S++I+++QQ  IMK 
Sbjct: 159 MMYVFPIMMIVISYKMPSGLQIYWLTSSLIAVIQQYFIMKK 199


>gi|159040588|ref|YP_001539841.1| 60 kDa inner membrane insertion protein [Salinispora arenicola
           CNS-205]
 gi|157919423|gb|ABW00851.1| 60 kDa inner membrane insertion protein [Salinispora arenicola
           CNS-205]
          Length = 338

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 32/264 (12%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYVSTANM 389
             I W    +      + +     L  N+     I+   V V+++ FP+  KQ  S   M
Sbjct: 8   YAISWILLLWHQAWDAIGVPDGAVLGTNWAWILAIIFLVVTVRVILFPVFVKQIKSQRAM 67

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP++  L+EK K    + LQK M++LY+    NPL GC P+ LQIPVF  ++ V+  
Sbjct: 68  QALQPQVKALQEKHKG-DRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHVLRR 126

Query: 450 ---SLEMRHAPFWGWIKDLAAADPTNIFTLFG----------------ILPFYLPGFMHV 490
                 +     +GW  D    D  ++  LF                 +        +  
Sbjct: 127 LNPDKPLDKKTLYGWTVD--QFDSASVAKLFTAPIAGKFGSSAEELARLGADGTTVKIMA 184

Query: 491 GIWPIIMSLSMFIQMK----MSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYW 542
           GI  ++M  + ++  +     +    D  Q MI   M    P   + + + FP G+IIYW
Sbjct: 185 GILVLVMMGTTYLTSRQMILKTGWAEDPQQRMIQRLMLYGIPASLLISGAIFPIGVIIYW 244

Query: 543 SWSNVISIVQQAVIMKMHGAEIGL 566
             +N+ ++ QQ  +++       +
Sbjct: 245 VTNNMFTLAQQQWVLRKFPPPPNV 268


>gi|308801639|ref|XP_003078133.1| putative PPF-1 protein (ISS) [Ostreococcus tauri]
 gi|116056584|emb|CAL52873.1| putative PPF-1 protein (ISS) [Ostreococcus tauri]
          Length = 455

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 20/227 (8%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            ++G +I+L TV VKL  FPL+K+Q  S+  M+ +QP+I EL+  +    P+ LQ    +
Sbjct: 133 YSYGYSILLLTVLVKLATFPLSKQQVESSIQMQAMQPRIKELQAMYAN-DPERLQLEQAR 191

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLAAADPTNIFTL 476
           LY+    NPLAGC P+   +PVF  +Y+ +S +  E      + WI  L           
Sbjct: 192 LYREAGFNPLAGCLPLFATLPVFIGLYRALSNAAAEHLLDDGFYWIPSLGGPTSIAARND 251

Query: 477 FGILPFYLPGFMHVGIW-----------PIIMSLSMFIQMKM---SPPPADKGQAM---I 519
                +  P                   P+++ +S F+   +    P   D  Q     I
Sbjct: 252 GNGFAWLWPFVDGHPPLGWYETGCYLVLPVLLVVSQFVSQTIISPQPKTDDPAQQQSQAI 311

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           L ++P +  F   + PAGL +YW ++N+I+  Q  V+++     I +
Sbjct: 312 LKFLPFMIGFFSLNVPAGLTLYWFFNNIITTAQT-VVLRKITKPIEV 357


>gi|330253081|gb|AEC08175.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
          Length = 432

 Score =  127 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 111/237 (46%), Gaps = 30/237 (12%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++   +G AI+L T+ VK   +PL K+Q  ST  M+N+QPKI  +++++  +  + +Q  
Sbjct: 135 HVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLE 193

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA-PFWGWIKDLAAADPTNI 473
             +LYK   +NPLAG + I    P           S+  R +     W+           
Sbjct: 194 TSRLYKQAGVNPLAGFFWI----PSLGG-----PTSIAARQSGSGISWL----------F 234

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFV 528
             + G  P      +   + P+++  S ++ M++  PP   D  Q     +  ++P++  
Sbjct: 235 PFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIG 294

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581
           +   S P+GL IYW  +NV+S  QQ  + K+ GA+  + +     + +  +K   +Q
Sbjct: 295 YFALSVPSGLSIYWLTNNVLSTAQQVYLRKLGGAKPNMDENASKIISAGRAKRSIAQ 351


>gi|298246125|ref|ZP_06969931.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter
           racemifer DSM 44963]
 gi|297553606|gb|EFH87471.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter
           racemifer DSM 44963]
          Length = 353

 Score =  127 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 24/243 (9%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +    + P+F  +  FY L G+FG+AI++ TV +KLL FPL  +Q  S+  M+ +QPKI 
Sbjct: 9   FNIIFSYPIFNGLVVFYRLFGDFGLAIIVLTVLIKLLLFPLTLQQLRSSKAMQVLQPKIA 68

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------SIS 450
           E+++K      Q    AM QLYK + + PLAGC P+++Q+PV + +Y  +        ++
Sbjct: 69  EIKKKHPG-DVQSQSLAMNQLYKEYGVKPLAGCLPMVIQLPVLYGLYFAVGGILRDQHLT 127

Query: 451 LE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP--GFMHVGIWPIIMSLSMFIQMKM 507
           +E +    +          D    +  F    +++         I PI+  L+ F+ ++M
Sbjct: 128 IETLNRELYPFVAPFKGVPDINLRWFEFLNPHWFISLGQPDPTHILPILAGLATFVSLRM 187

Query: 508 -------------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
                        +P P  +    +   MP V +F   +FPAGL +YW+ S++   VQQ 
Sbjct: 188 AQPRNAQAKKDKSTPDPMVQSMQTMQYVMPFVTIFIGWTFPAGLALYWTVSSIFQAVQQY 247

Query: 555 VIM 557
            + 
Sbjct: 248 FVT 250


>gi|315039282|ref|YP_004032850.1| stage III sporulation protein J [Lactobacillus amylovorus GRL 1112]
 gi|325957756|ref|YP_004293168.1| stage III sporulation protein J [Lactobacillus acidophilus 30SC]
 gi|312277415|gb|ADQ60055.1| stage III sporulation protein J [Lactobacillus amylovorus GRL 1112]
 gi|325334321|gb|ADZ08229.1| stage III sporulation protein J [Lactobacillus acidophilus 30SC]
 gi|327184389|gb|AEA32836.1| stage III sporulation protein J [Lactobacillus amylovorus GRL 1118]
          Length = 298

 Score =  127 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 21/257 (8%)

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379
                   P      +W   + +      ++     +  ++G AI++ TV V+++  PL 
Sbjct: 39  QGANGQVAPVSHTSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTVIVRVILLPLN 98

Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQ 436
                ST  M++IQP+I+ELR+K+     +     Q+   +LYK   +NP AGC P+++Q
Sbjct: 99  AISIRSTTKMQSIQPQINELRKKYPGRDTESRSLLQQETNKLYKEAGVNPYAGCLPLIIQ 158

Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           +PV +A+Y  I  + ++     + W+ DL+  DP  I  +  +   +             
Sbjct: 159 LPVMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYFIMPILAMAFTF------------- 203

Query: 497 MSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
             LS +I    +P  +  G   I+ + M ++       F + + +YW  SN+   VQ  +
Sbjct: 204 --LSTYISQLSTPASSQNGMTKIMTYGMSIMVGVMALQFQSAITLYWVISNLFQAVQTFI 261

Query: 556 IMKMHGAEIGLIDRLRS 572
           +      +     +  +
Sbjct: 262 LQNPLKYKREQEAKAEA 278


>gi|260584254|ref|ZP_05852001.1| stage III sporulation protein J [Granulicatella elegans ATCC
           700633]
 gi|260157772|gb|EEW92841.1| stage III sporulation protein J [Granulicatella elegans ATCC
           700633]
          Length = 271

 Score =  127 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 103/222 (46%), Gaps = 26/222 (11%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
            I      +++  +    ++G+ I++ T+  +++  P+   QY +T     +QP+I++LR
Sbjct: 38  IIYNLSQFIITLSHIFGNSYGLGIIVFTIITRIVLVPVMHFQYKTTRQTAILQPEINKLR 97

Query: 401 EKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           EK+     Q     ++ +  LY+   +N  AGC P+ +Q+PV  A+Y+ IS +  ++   
Sbjct: 98  EKYSARDHQTQEILREEISALYEREGVNQYAGCLPVAIQLPVMIALYQAISRTEALKTGS 157

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + W  +L   DP                     I PI++  + +    ++    D G A
Sbjct: 158 -FLWF-NLDQPDPFF-------------------ILPILVVATTYATSWLTMKMQDSGAA 196

Query: 518 -MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             I+ + +P +  F   +FP+ L +YW   N+  ++Q  ++ 
Sbjct: 197 GKIMLFVLPAMIGFTALTFPSALSLYWVVGNIFMVIQTLIMN 238


>gi|219848108|ref|YP_002462541.1| 60 kDa inner membrane insertion protein [Chloroflexus aggregans DSM
           9485]
 gi|219542367|gb|ACL24105.1| 60 kDa inner membrane insertion protein [Chloroflexus aggregans DSM
           9485]
          Length = 313

 Score =  127 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 17/235 (7%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
              +      +  L+ +F +L GN  + I+L T+  +L   PL      S+  M+ +QP 
Sbjct: 1   MNIWSAFVGLLEQLLLFFSSLTGNMALGIVLFTIAARLFILPLTLSSLRSSRRMQEVQPI 60

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEM 453
           + E++ K+    PQ LQ+  +++Y+ + INP+ GC P+LLQ+P+FF +Y+ +      E 
Sbjct: 61  LKEIQRKY-GKDPQRLQEETLRVYREYKINPVGGCLPLLLQLPIFFGVYQAVYHLMVPEQ 119

Query: 454 R---HAPFWGWIKD------LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           R    A     +KD      L+A        +    P    GF ++ + P++  +   +Q
Sbjct: 120 RVNLSAAAAEMLKDERLAQILSAPFFGMDLGVPAFGPNGFAGFAYL-VLPVLSIVLQLVQ 178

Query: 505 MKM-SPPPADKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
             M +P   D  Q      +  MP VF +   +FP G ++YW  S+VI ++QQ  
Sbjct: 179 QLMATPRVQDPQQKAFTQAMLIMPFVFGYIAFTFPTGAVLYWVVSSVIGVIQQYF 233


>gi|292669288|ref|ZP_06602714.1| stage III sporulation protein J [Selenomonas noxia ATCC 43541]
 gi|292649129|gb|EFF67101.1| stage III sporulation protein J [Selenomonas noxia ATCC 43541]
          Length = 224

 Score =  127 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 54/190 (28%), Positives = 100/190 (52%), Gaps = 21/190 (11%)

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433
           + +PL  KQ  S   M+ IQPK+ +++EK+K +P Q+LQ+   +L++   +NPLAGC P+
Sbjct: 49  VTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNNP-QMLQQKTGELFRNAGVNPLAGCLPL 107

Query: 434 LLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           L+Q+P+   +Y  +   +     A  + W+ +++  DP                     I
Sbjct: 108 LVQMPILMGMYYALFNFTFPSAAAAAFFWLPNMSEPDPLY-------------------I 148

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            P++ +L+ F+Q KM+    +    +++  MP+   +    FP+GL++YW   NV+ I+Q
Sbjct: 149 LPVLSALTTFLQQKMTSTEMNAQMKIMMTVMPLFIGWISLKFPSGLVLYWVTMNVVQIIQ 208

Query: 553 QAVIMKMHGA 562
           Q  + +  G 
Sbjct: 209 QWWMYRSEGP 218


>gi|290968158|ref|ZP_06559703.1| stage III sporulation protein J family protein [Megasphaera
           genomosp. type_1 str. 28L]
 gi|290781833|gb|EFD94416.1| stage III sporulation protein J family protein [Megasphaera
           genomosp. type_1 str. 28L]
          Length = 223

 Score =  127 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 32/235 (13%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGI-----AIMLTTVFVKLLFFPLAKKQYVSTAN 388
           +       +   M   ++Y Y    + G      AI++ T+ +K +  PL  KQ  S   
Sbjct: 1   MFAHIISPLTYIMSTFLTYCYTFTQHIGYPSYGAAIIMLTLIIKFILSPLTAKQIKSMQG 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ IQPKI EL++K+K +  + LQ+ M +LYK   +NPL+GC PI++Q+P   +I+  + 
Sbjct: 61  MQVIQPKIKELQKKYKGN-QKKLQEEMRKLYKETGVNPLSGCLPIIIQMPFLISIFYALR 119

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
                 H   + W+  L + DPT+                   + P++ +LS F+  K  
Sbjct: 120 NYPYDPHFESFLWLPSLGSPDPTH-------------------VLPVLSALSTFLIQKQM 160

Query: 509 PPPA------DKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
                        Q  I+   MP+   +    FP+GL+IYW  SNV    QQ ++
Sbjct: 161 TGAQVTEGEGQASQQKIMQIVMPLFIGWISWRFPSGLVIYWVLSNVFQWAQQMIM 215


>gi|229082700|ref|ZP_04215147.1| Membrane protein oxaA 1 [Bacillus cereus Rock4-2]
 gi|228700612|gb|EEL53151.1| Membrane protein oxaA 1 [Bacillus cereus Rock4-2]
          Length = 178

 Score =  127 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 27/184 (14%)

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILL 435
             KQ  ST  M+ +QP++ +L+EK+        Q LQ+ M+QLY+ + +NPLAGC PI +
Sbjct: 1   MIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFI 60

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           Q+P+ FA Y  I  + E++    + W  DL  ADP                     I P+
Sbjct: 61  QMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPFY-------------------ILPV 99

Query: 496 IMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           + +++ FIQ K++       +   AM+L  MP++ +    +FPA L +YW   N+  I Q
Sbjct: 100 VAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQ 159

Query: 553 QAVI 556
              I
Sbjct: 160 MYFI 163


>gi|330468742|ref|YP_004406485.1| 60 kDa inner membrane insertion protein [Verrucosispora maris
           AB-18-032]
 gi|328811713|gb|AEB45885.1| 60 kDa inner membrane insertion protein [Verrucosispora maris
           AB-18-032]
          Length = 300

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 30/234 (12%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            ++ + I+   + V+ + FP+  KQ  +   M+ +QP+I  L+EK K    + LQK +++
Sbjct: 41  WSWVLGIVFLVLTVRAVLFPVFVKQIKAQRAMQALQPQIKALQEKHKD-DRETLQKELVE 99

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEMRHAPFWGWIKDLAAADPTNIF 474
           LY+    NPL GC P+L+QIPVF  ++ V+     S+       +GW   +   D  +  
Sbjct: 100 LYRAGQANPLMGCLPMLVQIPVFLGLFHVLRHLKPSMPEHMKTLYGWT--VTQFDSASTA 157

Query: 475 TLFG----------------ILPFYLPGFMHVGIWPIIMSLSMFIQMKM----SPPPADK 514
           TLFG                +    +   +   I  +IM  + ++  +     +    D 
Sbjct: 158 TLFGAPIAANFRSGTQELALLGADGVTVRVVAAILIVIMIATTYLSSRQMILRTGWAEDP 217

Query: 515 GQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            Q M+   M    P+  + +   FP G+IIYW  +N+ S+ QQ  +++ +    
Sbjct: 218 QQKMMQRLMLYGIPLSLLVSGLIFPIGVIIYWVTTNLFSLGQQTWVLRKYPPPP 271


>gi|259502133|ref|ZP_05745035.1| stage III sporulation protein J [Lactobacillus antri DSM 16041]
 gi|259169946|gb|EEW54441.1| stage III sporulation protein J [Lactobacillus antri DSM 16041]
          Length = 281

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 112/250 (44%), Gaps = 27/250 (10%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W ++I       + +  N  G +G+ I++ T+ +++L  PLA  Q  S   M+ + P++ 
Sbjct: 41  WDHYIVYNFSQFIIWLSNHTGGYGMGIIIFTIIIRVLLLPLAFYQTKSMVRMQEVAPQLK 100

Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
            +++K+          +Q+   +LYK   ++P+A   P+++Q+P+ +A+Y+ I  + E+R
Sbjct: 101 AIQKKYSSRDRDSMMKMQEETQKLYKEAGVHPMASMLPMIVQLPIMWALYQAIWRTPELR 160

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-- 512
           H   + W++ L   DP                     + P++ ++  F+   +S      
Sbjct: 161 H-GTFLWLQ-LGHTDPYY-------------------VLPVLAAVFTFVSSWLSMASMPE 199

Query: 513 -DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
            +    M+  +MP++  F    F + + +YW  SN   +VQ  ++           ++ R
Sbjct: 200 KNSMTTMMTWFMPIMIFFMALGFSSAITLYWVVSNAFQVVQTLLLQNPFKIRREREEKQR 259

Query: 572 STFSKNYNSQ 581
              ++    +
Sbjct: 260 VAKARKRKIE 269


>gi|251800247|ref|YP_003014978.1| hypothetical protein Pjdr2_6289 [Paenibacillus sp. JDR-2]
 gi|247547873|gb|ACT04892.1| 60 kDa inner membrane insertion protein [Paenibacillus sp. JDR-2]
          Length = 258

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 66/227 (29%), Positives = 111/227 (48%), Gaps = 25/227 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             +      L  +     G++G+AI+L T+ V+    PL  KQY S+  M+ IQP++ E+
Sbjct: 47  NVVYYFALTLDKFADWFNGSYGLAILLITIIVRTAILPLTLKQYRSSKAMQAIQPQMAEI 106

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           ++K K +P Q  Q+  ++L++ + +NP+AGC P+L+Q+PVF A+Y  I  + E+R   F 
Sbjct: 107 KKKHKDNP-QKQQEETMKLFQANKVNPMAGCLPLLVQMPVFMALYNSIYWNPEVRTHEFL 165

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQ 516
           G               L    P+Y          PII + + F+Q KM          G 
Sbjct: 166 G-------------LQLGEPGPWYF--------LPIIAAATTFVQSKMMQKQQTQTMPGM 204

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             +L   PV+      +FP+ L +YW +SN+ +I+Q   +      +
Sbjct: 205 GAMLMIFPVLIFVMALNFPSALPLYWIFSNLYTIIQNYFLYVRSSNK 251


>gi|147772782|emb|CAN71675.1| hypothetical protein VITISV_036218 [Vitis vinifera]
          Length = 623

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/255 (25%), Positives = 114/255 (44%), Gaps = 42/255 (16%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++   +G AI+L TV VK   FPL KKQ  S   M+++QP+I  +++++     + +Q  
Sbjct: 174 HVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQRYAG-DQERIQLE 232

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470
             +LYK   INPLAGC P L  IPV+  +Y+ +S  + E      + WI  L+       
Sbjct: 233 TARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLSGPTTIAA 292

Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--------- 513
               + I  LF    G  P      +   + P+++ +S +I +++               
Sbjct: 293 RQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPMLLIVSQYISVQIMQSSQQWELLGHLKG 352

Query: 514 --------------------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
                               K    +  ++P++  +   S P+GL +YW  +N++S  QQ
Sbjct: 353 VPKLELETMIGLSQSNDPSLKTSQALTKFLPLMIGYFALSVPSGLSLYWFTNNILSTAQQ 412

Query: 554 AVIMKMHGAEIGLID 568
             + K+ GA+I +  
Sbjct: 413 VWLQKLGGAQIPVKQ 427


>gi|238061909|ref|ZP_04606618.1| inner membrane insertion protein [Micromonospora sp. ATCC 39149]
 gi|237883720|gb|EEP72548.1| inner membrane insertion protein [Micromonospora sp. ATCC 39149]
          Length = 327

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 30/256 (11%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYVSTANM 389
             I W    + +    + +     +  N+     I+   V V+++ FP+  KQ  S   M
Sbjct: 9   YAISWILLTWHSAWDAIGVPVDAVIGTNWAWILAIVFLVVTVRVILFPVFVKQIKSQRAM 68

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP++ EL+EK K    + LQK M++LY+    NPL GC P+ LQIPVF  ++ V+  
Sbjct: 69  QALQPRVKELQEKHKG-DRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHVLRR 127

Query: 450 -SLEMRHAPFWGWIKDLAAADPTNIFTLFG----------------ILPFYLPGFMHVGI 492
                 +   +GW  +    D  +   LF                 +        +  GI
Sbjct: 128 LDPAKVNKTLYGWTVE--QFDSASSAKLFTAPIAGKFGSTADELARLGANGTTVKVIAGI 185

Query: 493 WPIIMSLSMFIQMK----MSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSW 544
             ++M  + ++  +     +    D  Q MI   M    P+  + + + FP G+IIYW  
Sbjct: 186 LVLVMMGTTYLTSRQMILKTGWAEDPQQKMIQRLMLYGIPLSLLVSGAIFPIGVIIYWVT 245

Query: 545 SNVISIVQQAVIMKMH 560
           +N+ ++ QQ  +++ +
Sbjct: 246 NNLFTLGQQQWVLRKY 261


>gi|312869223|ref|ZP_07729395.1| putative stage III sporulation protein J [Lactobacillus oris
           PB013-T2-3]
 gi|311095244|gb|EFQ53516.1| putative stage III sporulation protein J [Lactobacillus oris
           PB013-T2-3]
          Length = 269

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 112/250 (44%), Gaps = 27/250 (10%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W ++I       + +  N  G +G+ I++ T+ +++L  PLA  Q  S   M+ I P++ 
Sbjct: 29  WDHYIVYNFSQFIIWLSNHTGGYGMGIIIFTIIIRVLLLPLAFYQTKSMVRMQEITPQLK 88

Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
            +++K+          +Q+   +LYK   ++P+A   P+++Q+P+ +A+Y+ I  + E+R
Sbjct: 89  AVQKKYSSRDRDSMMKMQEETQKLYKEAGVHPMASMLPMIVQLPIMWALYQAIWRTPELR 148

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-- 512
           H   + W++ L   DP                     + P++ ++  F+   +S      
Sbjct: 149 H-GTFLWLQ-LGHTDPYY-------------------VLPVLAAVFTFVSSWLSMASMPE 187

Query: 513 -DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
            +    M+  +MP++  F    F + + +YW  SN   +VQ  ++           ++ R
Sbjct: 188 KNSMTTMMTWFMPIMIFFMALGFSSAITLYWVVSNAFQVVQTLLLQNPFKIRREREEKQR 247

Query: 572 STFSKNYNSQ 581
              ++    +
Sbjct: 248 VEKARKRKIE 257


>gi|223995523|ref|XP_002287435.1| chloroplast membrane protein [Thalassiosira pseudonana CCMP1335]
 gi|220976551|gb|EED94878.1| chloroplast membrane protein [Thalassiosira pseudonana CCMP1335]
          Length = 407

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/309 (19%), Positives = 116/309 (37%), Gaps = 25/309 (8%)

Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338
            D H  +               ++ +    +            +++     +  +   G 
Sbjct: 10  DDIHNLHHLTTIMPSPDQHQVTTLLSQTTTWLSDAAAVADAAKDENSWWESYIQIYKNGL 69

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +     +   +         +G++I L T  V+ L  P + +Q  S+  MK ++P   +
Sbjct: 70  AFVHDNIVDEPLRKLG-FDQTWGVSIFLFTAGVRALLVPFSIQQSKSSEYMKALKPYQQK 128

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAP 457
           ++EK+     Q   +A+ +L++    NPLAGC     QIP+F  +Y+ V  ++ E R   
Sbjct: 129 IKEKYTDKNMQ--NRAISKLFEDAQANPLAGCVTSFAQIPIFLGLYRSVTRLAQEGRLDE 186

Query: 458 FWGWIKDLAAA----------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
            + WI  L             +      + G+ P      +   + P+++ L     M +
Sbjct: 187 PFLWIPSLQGPVTAETNYRGTEWLTQGWVDGVPPLSWETTLAFCVMPVLLVLGQSFTMNV 246

Query: 508 SPPPADKGQ-----------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
              P D  Q             IL ++P++  F     PAGL IYW  SN+ ++ Q  +I
Sbjct: 247 LQQPDDDSQDEETKKQMESTKTILKFLPLMIGFFSLQVPAGLTIYWFTSNLFTVSQSLII 306

Query: 557 MKMHGAEIG 565
              + A   
Sbjct: 307 RGYYAANPP 315


>gi|206970211|ref|ZP_03231164.1| stage III sporulation protein J [Bacillus cereus AH1134]
 gi|229072507|ref|ZP_04205709.1| Membrane protein oxaA 2 [Bacillus cereus F65185]
 gi|229082266|ref|ZP_04214729.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-2]
 gi|229181313|ref|ZP_04308643.1| Membrane protein oxaA 2 [Bacillus cereus 172560W]
 gi|229193300|ref|ZP_04320251.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 10876]
 gi|206734788|gb|EDZ51957.1| stage III sporulation protein J [Bacillus cereus AH1134]
 gi|228590277|gb|EEK48145.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 10876]
 gi|228602206|gb|EEK59697.1| Membrane protein oxaA 2 [Bacillus cereus 172560W]
 gi|228700698|gb|EEL53221.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-2]
 gi|228710483|gb|EEL62456.1| Membrane protein oxaA 2 [Bacillus cereus F65185]
          Length = 260

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FG+AI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWNHYFVYPISYMIQFVAHHIPGASFGVAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   E 
Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 254


>gi|206978224|ref|ZP_03239104.1| stage III sporulation protein J [Bacillus cereus H3081.97]
 gi|217962498|ref|YP_002341070.1| OxaA-like protein precursor [Bacillus cereus AH187]
 gi|222098473|ref|YP_002532531.1| oxaa-like protein precursor [Bacillus cereus Q1]
 gi|206743583|gb|EDZ55010.1| stage III sporulation protein J [Bacillus cereus H3081.97]
 gi|217066063|gb|ACJ80313.1| stage III sporulation protein J [Bacillus cereus AH187]
 gi|221242532|gb|ACM15242.1| probable stage III sporulation protein J [Bacillus cereus Q1]
          Length = 260

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ ++   E 
Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMEREE 254


>gi|116671593|ref|YP_832526.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24]
 gi|116611702|gb|ABK04426.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24]
          Length = 275

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 25/246 (10%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
                         M         + ++I+   + ++    P+  +Q  +   M+ +QP 
Sbjct: 19  VSTIMVGFHDGLAAMGMPAADGWTWTLSIIGLVLVIRAALIPVFLQQVNAQRRMRRLQPD 78

Query: 396 IDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-- 449
           +  L++K+K        Q + +  + LYK H  +P + C P+L+Q P F A+++V+S   
Sbjct: 79  LKSLQDKYKGKADQLSRQAMAQEQMALYKKHGTSPFSACLPLLIQAPFFLALFQVLSGIS 138

Query: 450 SLEMRHAPFWGWIKD-LAAADPTNIFTLFGILPF--------YLPGFMHVGIWPIIMSLS 500
           S   R         + +   D ++IF                 L   +   +  + M+ +
Sbjct: 139 SAAGRGQGIGTMSHEQVVQFDQSSIFGAPLSASLLHGSGGGDALAVTVLAIVMILAMTAA 198

Query: 501 MFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
            F+  K+             PA   Q MIL  +PV+F      FP G++IYW+ SN+ ++
Sbjct: 199 QFLTQKLIMARFASGEAEAGPAMIQQKMILYVLPVIFGAGGIVFPIGVLIYWTVSNLWTL 258

Query: 551 VQQAVI 556
            QQ V+
Sbjct: 259 AQQFVV 264


>gi|30023056|ref|NP_834687.1| OxaA-like protein precursor [Bacillus cereus ATCC 14579]
 gi|229049708|ref|ZP_04194265.1| Membrane protein oxaA 2 [Bacillus cereus AH676]
 gi|229112464|ref|ZP_04242001.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-15]
 gi|229130275|ref|ZP_04259234.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-Cer4]
 gi|38502940|sp|Q815V9|OXAA2_BACCR RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|29898616|gb|AAP11888.1| 60 kDa inner membrane protein YIDC [Bacillus cereus ATCC 14579]
 gi|228653208|gb|EEL09087.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-Cer4]
 gi|228670844|gb|EEL26151.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-15]
 gi|228722621|gb|EEL74009.1| Membrane protein oxaA 2 [Bacillus cereus AH676]
 gi|326942840|gb|AEA18736.1| OxaA-like protein precursor [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 260

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   E 
Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 254


>gi|331702707|ref|YP_004399666.1| membrane protein oxaA [Lactobacillus buchneri NRRL B-30929]
 gi|329130050|gb|AEB74603.1| Membrane protein oxaA [Lactobacillus buchneri NRRL B-30929]
          Length = 278

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 104/258 (40%), Gaps = 27/258 (10%)

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
             P           + +      ++        N+G+ I++ T+ V+++  PL   Q  S
Sbjct: 26  NAPITNHSTGIWDGWVVLNFSRAIIWLSKFFSDNYGMGIIIFTILVRIVILPLMIYQTRS 85

Query: 386 TANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
               + +QP++  L++K+        Q LQ    +LY    INPLAGC P+++Q+P+ FA
Sbjct: 86  MRKTQEVQPQLKALQKKYSSRDAETVQKLQAEQKKLYAEAGINPLAGCLPLIVQMPILFA 145

Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           +Y+ I  +  +R +  + W++ L   DP                     + PI+ +L  F
Sbjct: 146 LYQAIWRTHILR-SGTFFWLQ-LGHPDPYF-------------------VLPILAALFTF 184

Query: 503 IQMKMSP--PPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           I   ++    P       ++   MP   +    S P+ L +YW  +N   + Q  VI   
Sbjct: 185 ISSWLAMKGQPESNSMTTMMTVGMPFFILIMAISLPSALSLYWVITNAFQVGQTLVIQNP 244

Query: 560 HGAEIGLIDRLRSTFSKN 577
                   ++ R    K 
Sbjct: 245 WKIRRERENKQREEREKQ 262


>gi|291165949|gb|EFE27996.1| stage III sporulation protein J [Filifactor alocis ATCC 35896]
          Length = 243

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 40/254 (15%)

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
           ML+   Y +  N+G+AI+  T+ VKL   PL   Q  S   M  IQP I ++++K+ +  
Sbjct: 1   MLLKMIYTVTQNYGLAIIFFTIIVKLAMLPLTLSQNKSMMEMNKIQPLIQDIQKKYPKDK 60

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF--------- 458
            Q   +   QLYK H +NP+ GC P+L+Q+P+ FA+++ +   +E               
Sbjct: 61  -QKQAELTTQLYKEHGVNPMMGCLPLLVQMPILFALFRALRNPVEYVFGSETLFQVADTS 119

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--------- 509
           + W+K+L++ D   I            GF    I+PI+ + + FI  KM+          
Sbjct: 120 FLWLKNLSSPDIITI-----------GGFAFPFIFPIVAAAATFIDTKMTMLKNDKKKEK 168

Query: 510 ----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
                      P +  Q  +L  MP++  +   SFPAGL IYW+ S + SI Q+ ++ ++
Sbjct: 169 QKDGKQNQPENPGESMQKTMLYMMPLMIFWWGRSFPAGLSIYWAVSTLFSIAQRKIVERI 228

Query: 560 HGAEIGLIDRLRST 573
             ++      +   
Sbjct: 229 SLSKEKGTQAIERR 242


>gi|257057913|ref|YP_003135745.1| preprotein translocase subunit YidC [Saccharomonospora viridis DSM
           43017]
 gi|256587785|gb|ACU98918.1| preprotein translocase subunit YidC [Saccharomonospora viridis DSM
           43017]
          Length = 346

 Score =  126 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/270 (20%), Positives = 100/270 (37%), Gaps = 33/270 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++  ++ +            + + I+  T  V+ L F     Q  S   
Sbjct: 1   MLDFIYYPVSFILWVWHKVFGFVFGEDNAIAWVLGIVFLTFTVRGLLFKPFVNQVRSMRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M++  P++  +++K+     Q     + +L + H +NP   C PILLQIPVF  +  V+ 
Sbjct: 61  MQDFAPEVKRIQKKYAN-DRQRQAMELQRLQREHGVNPFGSCLPILLQIPVFIGLNWVLR 119

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTL--------------FGILPFYLPGFMHVGIWP 494
                  + ++    D+A+     IF +               G   +            
Sbjct: 120 NFRPGAESNYFFDADDVASYVDAQIFGINLGDAINHLGLAGGGGDSGWNWDVAPLAVPLM 179

Query: 495 IIMSLSMFIQMK-----MSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWS 545
           I+  ++  +  +      +P  A    A++    L   P   V   + FP GL+IYW  +
Sbjct: 180 IVAGIATHLTARHSVARQNPASATPQTAVMNRLTLYVFPAGVVVFGAFFPIGLLIYWLAN 239

Query: 546 NVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
           NV ++ QQ  + K    E     +      
Sbjct: 240 NVWTLGQQRFVYKKIDKEEEAKRQAAKEKR 269


>gi|311112576|ref|YP_003983798.1| membrane protein OxaA [Rothia dentocariosa ATCC 17931]
 gi|310944070|gb|ADP40364.1| membrane protein OxaA [Rothia dentocariosa ATCC 17931]
          Length = 342

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 102/258 (39%), Gaps = 26/258 (10%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F++ +    ++F      + M         + + I+  T+ ++ +  PL  +Q  S   M
Sbjct: 11  FKLAVSAVLWFFHTIFTSIGMDPSSGFT--WVLCIICLTLVMRAVTIPLFMRQIKSMRGM 68

Query: 390 KNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
             +Q  I +L+ K+K        Q + +  + L+K H  +P + C PI+ Q P+F  +Y+
Sbjct: 69  NAMQGDIAKLQAKYKGKKDQLSRQAMAQEQMALFKKHGTSPFSSCMPIIAQTPIFLGLYQ 128

Query: 446 VISI---SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG-------FMHVGIWPI 495
           V+     +            + +   +   IF          PG            I  +
Sbjct: 129 VLMGVSGAAANNEDILLLPAELVKQFNEAYIFGSPIFSTMMNPGNGNHTATVAQAIIMIL 188

Query: 496 IMSLSMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
           +MS + F   K              P  + Q M++   P++F     +FP G++ YW+ S
Sbjct: 189 LMSGTQFFIQKQLSAKNISEAAKSSPMFRQQQMMMYVFPLIFAVTGVNFPIGVMYYWTVS 248

Query: 546 NVISIVQQAVIMKMHGAE 563
           N  ++ QQ  +++ +   
Sbjct: 249 NFWALGQQWWVIRNNPNP 266


>gi|330470829|ref|YP_004408572.1| 60 kDa inner membrane insertion protein [Verrucosispora maris
           AB-18-032]
 gi|328813800|gb|AEB47972.1| 60 kDa inner membrane insertion protein [Verrucosispora maris
           AB-18-032]
          Length = 325

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 28/260 (10%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYVSTANM 389
             I W    + +    + +     L  N+     I+   V V+++ FP+  KQ  S   M
Sbjct: 9   YAISWILLAWHSAWDAIGVPETAVLGTNWSWILAIIFLVVTVRVILFPIFVKQIKSQRAM 68

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP++  L+EK K    + LQK M++LY+    NPL GC P+ LQIPVF  ++ V+  
Sbjct: 69  QALQPQVKALQEKHKG-DRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHVLRR 127

Query: 450 ---SLEMRHAPFWGWI--------------KDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
                   +   +GW                 +A+   +    L  +        +  GI
Sbjct: 128 LNPDPAKANKDIYGWTVEQFNSASDATLFTAPIASKFGSTAAELAQLGANGTTVKVMAGI 187

Query: 493 WPIIMSLSMFIQMKM----SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSW 544
             ++M  + ++  +     +    D  Q MI   M    P+  + + + FP G+IIYW  
Sbjct: 188 LVLVMMGTTYLTSRQMILKTGWAEDPQQRMIQRLMLYGIPLSLLISGAIFPIGVIIYWVT 247

Query: 545 SNVISIVQQAVIMKMHGAEI 564
           +N+ ++ QQ  +++     +
Sbjct: 248 NNLFTLGQQQWVLRKFPPPV 267


>gi|229175718|ref|ZP_04303224.1| Membrane protein oxaA 2 [Bacillus cereus MM3]
 gi|228607669|gb|EEK64985.1| Membrane protein oxaA 2 [Bacillus cereus MM3]
          Length = 260

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 74/242 (30%), Positives = 128/242 (52%), Gaps = 37/242 (15%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            +  P ++ Q      I+  MP + +F   + P+GL++YW   N+ ++ Q  V+ ++   
Sbjct: 195 SNITPGEQVQMLKVQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMER 252

Query: 563 EI 564
           E 
Sbjct: 253 EE 254


>gi|303228587|ref|ZP_07315414.1| putative OxaA-like protein [Veillonella atypica ACS-134-V-Col7a]
 gi|303230686|ref|ZP_07317436.1| putative OxaA-like protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302514741|gb|EFL56733.1| putative OxaA-like protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302516766|gb|EFL58681.1| putative OxaA-like protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 218

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 104/206 (50%), Gaps = 24/206 (11%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
             ++G+AI++ TV +K +  PL  KQ  S   M+ +QP++ EL+EK+K   PQ LQ  M 
Sbjct: 27  FPSYGVAIIIITVIIKAILAPLTVKQIKSMKAMQELQPRMKELQEKYKN-DPQRLQAEMG 85

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            +YK   +NPLAGC P+L+Q+P   AI+  +           + W+  L  ADP      
Sbjct: 86  AMYKEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYNPEFEHFLWLPSLGEADPYY---- 141

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPPPADKGQAMILN-WMPVVFVFALS 532
                          I P++ +LS ++  +   M    A   Q  I+  +MP+   +   
Sbjct: 142 ---------------ILPVLSALSTWLMSRQTGMGASGAAAQQQKIMQIFMPLFIGYISL 186

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558
           +FP+GL+IYW  SNV  +VQQ  I K
Sbjct: 187 NFPSGLVIYWIVSNVFQLVQQHFIYK 212


>gi|47567064|ref|ZP_00237781.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus
           G9241]
 gi|229158625|ref|ZP_04286683.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 4342]
 gi|47556382|gb|EAL14716.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus
           G9241]
 gi|228624609|gb|EEK81378.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 4342]
          Length = 260

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   E 
Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 254


>gi|256848509|ref|ZP_05553951.1| cell division protein [Lactobacillus coleohominis 101-4-CHN]
 gi|256714776|gb|EEU29755.1| cell division protein [Lactobacillus coleohominis 101-4-CHN]
          Length = 277

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 27/249 (10%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W ++I       + +  N  G +G+ I++ T+ ++++  PL   Q  S   M+ + P++
Sbjct: 36  IWDHYIIYNCSRFIIWLSNHFGGYGMGIIIFTIIIRIIILPLMYYQTKSMMRMQELAPEL 95

Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
            +L++K+        Q LQ    +LYK   +NP A   P+++Q+PV +A+Y+ I  +  +
Sbjct: 96  KKLQKKYSSRDRETMQKLQVEQQKLYKEAGVNPFASMLPLIVQLPVMWALYQAIWRTSTL 155

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512
           RH   + W++ L   DP                     + PI+ +L  FI   +S     
Sbjct: 156 RH-GTFLWLQ-LGRPDPYY-------------------VLPILAALFTFISSWLSMASMP 194

Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
             +     +  +MP++  F    F + + +YW  +N   +VQ  ++            + 
Sbjct: 195 EKNSMSTAMTWFMPIMIFFMALGFSSAITLYWVVTNAFQVVQTLLLQNPFKIRREREAKQ 254

Query: 571 RSTFSKNYN 579
           R+   +   
Sbjct: 255 RAERQRKNK 263


>gi|228955284|ref|ZP_04117292.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228804417|gb|EEM51028.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 262

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FG+AI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 38  IWNHYFVYPISYMIQFVAHHIPGASFGVAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 98  ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   E 
Sbjct: 197 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 256


>gi|257452994|ref|ZP_05618293.1| inner membrane protein [Fusobacterium sp. 3_1_5R]
 gi|257466625|ref|ZP_05630936.1| inner membrane protein [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917780|ref|ZP_07914020.1| inner membrane protein oxaA [Fusobacterium gonidiaformans ATCC
           25563]
 gi|317059534|ref|ZP_07924019.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_5R]
 gi|313685210|gb|EFS22045.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_5R]
 gi|313691655|gb|EFS28490.1| inner membrane protein oxaA [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 205

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 113/221 (51%), Gaps = 22/221 (9%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  + + +  L+    N+V NFGI+I++ T+ V+++  PL  KQ  S   MK IQP+++ 
Sbjct: 5   YELLKQLISSLLLSVDNVVQNFGISIIIATIIVRIILLPLTLKQDKSMKAMKKIQPELEI 64

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L+EK+     Q+L +  ++LY+ H +NP  GC P+L+Q+P+ FA++ V+   + +     
Sbjct: 65  LKEKYGNDK-QLLNQKTMELYQKHKVNPAGGCLPLLVQLPILFALFGVLRGGI-IPEDSK 122

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W++ L   DP  IF                   P++     F Q K+     +     
Sbjct: 123 FLWLE-LTKPDPFYIF-------------------PLLNGAISFFQQKLMGNSDNPQMKN 162

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           ++   P++ +F     P GL +YW  S++ +++QQ  IMK 
Sbjct: 163 MMYMFPIMMIFISYKMPGGLQLYWLTSSLTAVLQQYFIMKK 203


>gi|284047382|ref|YP_003397722.1| membrane protein insertase, YidC/Oxa1 family [Conexibacter woesei
           DSM 14684]
 gi|283951603|gb|ADB54347.1| membrane protein insertase, YidC/Oxa1 family [Conexibacter woesei
           DSM 14684]
          Length = 309

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 110/226 (48%), Gaps = 11/226 (4%)

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
            +L+ +   +   +G++I+L T+ V+++  PL  KQ  S   ++ + P++  ++ K++  
Sbjct: 19  QVLLFFHDTVGTGWGLSIILLTITVRVILLPLTLKQVKSMQRLQLLAPELRRIQAKYRSD 78

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---------SLEMRHAP 457
             Q  Q+ M++ Y+ + +NPLA C+P+L Q+P F  +Y ++           + +     
Sbjct: 79  K-QRQQQEMMKFYQENRVNPLASCFPLLFQLPFFIGLYYMLRTDLRFDICGQTAKACADA 137

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
                  + A  P +   LF            + +  ++   +      +S    D+ Q 
Sbjct: 138 TAANFASVGAK-PGSESFLFIPDLTGRATGAVLVVLIVLYVGTQIASGLLSTASMDRNQR 196

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           MI+  +P+VFV  + +FPAGL++YW  +N  +IVQQ ++ K  G  
Sbjct: 197 MIMLGLPIVFVAFIINFPAGLMLYWITTNCWTIVQQLIVRKTVGLP 242


>gi|269129164|ref|YP_003302534.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata
           DSM 43183]
 gi|268314122|gb|ACZ00497.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata
           DSM 43183]
          Length = 351

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 22/253 (8%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            F+ L +   ++ +     +      +    +  +I+L TVF++LL FPL  KQ  ++  
Sbjct: 1   MFDWLYEIVAWFIVLIHKGLGTIVDPDSGLAWAGSIILLTVFLRLLMFPLFVKQIHASRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ + P+I  LR+K+ +   Q L + ++++Y+ +  NPLAGC P+L+Q+PVF  +++V++
Sbjct: 61  MQELSPQIQALRKKY-KHDKQRLNQEVMRVYQENGANPLAGCLPLLVQMPVFIGLFQVLN 119

Query: 449 I-SLEMRHAPFWGWIKDL----------AAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
             S        +G   +L           A  P      +G   +       V +   I 
Sbjct: 120 GISKAKEGESKYGISPELIHSAQHADIFGAVIPDTFLNAWGDGAWDAVAVTAVAVL--IS 177

Query: 498 SLSMFIQMKMSP---PPADK-----GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
           S + F  M+ S    P  D          ++ ++  +       FP G+++YW  SN  +
Sbjct: 178 STTTFFTMRASMKRQPVMDPDNPMVAAQKMMVFLAPLLGLFGLGFPLGVLLYWMTSNTWT 237

Query: 550 IVQQAVIMKMHGA 562
           + QQ  I   +  
Sbjct: 238 LAQQHYIYSKYPP 250


>gi|228942189|ref|ZP_04104729.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975118|ref|ZP_04135677.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981757|ref|ZP_04142052.1| Membrane protein oxaA 2 [Bacillus thuringiensis Bt407]
 gi|228777869|gb|EEM26141.1| Membrane protein oxaA 2 [Bacillus thuringiensis Bt407]
 gi|228784639|gb|EEM32659.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817523|gb|EEM63608.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
          Length = 262

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 38  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 98  ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   E 
Sbjct: 197 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 256


>gi|218235777|ref|YP_002369825.1| OxaA-like protein precursor [Bacillus cereus B4264]
 gi|228961262|ref|ZP_04122882.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229147568|ref|ZP_04275914.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST24]
 gi|229153210|ref|ZP_04281389.1| Membrane protein oxaA 2 [Bacillus cereus m1550]
 gi|296505459|ref|YP_003667159.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171]
 gi|218163734|gb|ACK63726.1| stage III sporulation protein J [Bacillus cereus B4264]
 gi|228630309|gb|EEK86959.1| Membrane protein oxaA 2 [Bacillus cereus m1550]
 gi|228635893|gb|EEK92377.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST24]
 gi|228798468|gb|EEM45461.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|296326511|gb|ADH09439.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171]
          Length = 260

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   E 
Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 254


>gi|296271541|ref|YP_003654173.1| 60 kDa inner membrane insertion protein [Thermobispora bispora DSM
           43833]
 gi|296094328|gb|ADG90280.1| 60 kDa inner membrane insertion protein [Thermobispora bispora DSM
           43833]
          Length = 318

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 61/269 (22%), Positives = 107/269 (39%), Gaps = 26/269 (9%)

Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384
           + +P    L     +          +    +   N+ + I+  TV ++L  +PL  KQ  
Sbjct: 1   MDLPFLNWLYTAVAWLITQIHSGYGVVLPADSGLNWALTIITLTVLMRLAIYPLFVKQMR 60

Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
           S+  ++ + PK+  LRE   +   Q L +  +++Y+   +NPL GC PIL Q P+F +I+
Sbjct: 61  SSRKLQELAPKLQRLRE-TYKHDRQRLAEEQMRVYQEAGVNPLGGCLPILAQSPIFISIF 119

Query: 445 KVISISLEMR---HAPFWGW-----IKDLAAADPTNIFTL------FGILPFYLPGFMHV 490
            V+    E R                  + A  P   FT       FG  P      +  
Sbjct: 120 TVLRAIAEDRAVYGMSQALVDSARAAHIIGAPLPATFFTSAADIQKFGADPMTTKIVLAC 179

Query: 491 GIWPIIMSLSMFIQMKMS------PPPADKG--QAMILNWMPVVFVFALSSFPAGLIIYW 542
            +   I + + F+ ++ S        P +    Q  IL ++  +      +FP GLI+YW
Sbjct: 180 FVA--ISACTTFLTVRQSVRRSIQQMPDNPMVQQQKILMYVSPLLALFSLNFPLGLILYW 237

Query: 543 SWSNVISIVQQAVIMKMHGAE-IGLIDRL 570
             +N+ ++ QQ      H    I     +
Sbjct: 238 VTTNLWTLGQQHWYYSRHPMPIIDAKGNV 266


>gi|229142366|ref|ZP_04270885.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST26]
 gi|228641136|gb|EEK97448.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST26]
          Length = 262

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 38  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 98  ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ ++   E 
Sbjct: 197 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMEREE 256


>gi|301056511|ref|YP_003794722.1| OxaA-like protein precursor [Bacillus anthracis CI]
 gi|300378680|gb|ADK07584.1| OxaA-like protein precursor [Bacillus cereus biovar anthracis str.
           CI]
          Length = 260

 Score =  125 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 130/240 (54%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++ +  PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSVMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ +++Q  V+ K+   E 
Sbjct: 195 SNSTPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 254


>gi|315640360|ref|ZP_07895476.1| stage III sporulation protein J [Enterococcus italicus DSM 15952]
 gi|315483896|gb|EFU74376.1| stage III sporulation protein J [Enterococcus italicus DSM 15952]
          Length = 280

 Score =  125 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 32/236 (13%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQK 413
            GN GI I+L T+ ++++  PL   Q  S    +++QP++ +L+ ++        Q L++
Sbjct: 56  FGNAGIGIILFTIIIRVILLPLMHFQTKSMRKTQDLQPQLKKLQAQYSSRDTQTQQKLRE 115

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
              +LY  +N+NP  GC P+L+Q+P+  A+++ IS    +     + W++ L   DP   
Sbjct: 116 ETQKLYAENNVNPYIGCLPLLVQMPILMALWQAISRVPAL-TEGHFLWLQ-LGLKDPYY- 172

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNW-MPVVFVFA 530
                             I PI+ +L  F    +S            I+ + MP++ +F 
Sbjct: 173 ------------------ILPILAALFTFASTYLSSMSQVESNASMKIMTFVMPLMILFM 214

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIM-----KMHGAEIGLIDRLRSTFSKNYNSQ 581
             +  +GL +YW  SN   ++Q  +I      +    E  L+ + +    K   +Q
Sbjct: 215 GVNLASGLSLYWVISNGFQVIQTLLINNPFVIRKEREEAALLAKEKERALKKAKNQ 270


>gi|94266688|ref|ZP_01290363.1| 60 kDa inner membrane insertion protein [delta proteobacterium
           MLMS-1]
 gi|93452676|gb|EAT03233.1| 60 kDa inner membrane insertion protein [delta proteobacterium
           MLMS-1]
          Length = 121

 Score =  125 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/126 (45%), Positives = 82/126 (65%), Gaps = 8/126 (6%)

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +LLQIPVFFA+YKV+  S+E+RHAPF  WI DL+A D   I        F +P    + +
Sbjct: 1   MLLQIPVFFALYKVLLQSVELRHAPFMLWINDLSAPDRLYIG-------FDIPWLGGIPV 53

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
             ++M+ SMFIQ KM+P  AD  QA I+ ++P+VF F   +F +GL++YW  +NV++I Q
Sbjct: 54  LTLLMAASMFIQQKMTPI-ADPMQARIMLFLPLVFFFLFLNFASGLVLYWFINNVLTIAQ 112

Query: 553 QAVIMK 558
           Q  I +
Sbjct: 113 QYTIYR 118


>gi|52140514|ref|YP_086317.1| OxaA-like protein precursor [Bacillus cereus E33L]
 gi|196040458|ref|ZP_03107758.1| stage III sporulation protein J [Bacillus cereus NVH0597-99]
 gi|51973983|gb|AAU15533.1| probable stage III sporulation protein J [Bacillus cereus E33L]
 gi|196028590|gb|EDX67197.1| stage III sporulation protein J [Bacillus cereus NVH0597-99]
          Length = 260

 Score =  125 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 129/240 (53%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ +++Q  V+ K+   E 
Sbjct: 195 SNSTPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 254


>gi|49480363|ref|YP_039040.1| OxaA-like protein precursor [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49331919|gb|AAT62565.1| probable stage III sporulation protein J [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 260

 Score =  125 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 129/240 (53%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ +++Q  V+ K+   E 
Sbjct: 195 SNSTPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 254


>gi|116493571|ref|YP_805306.1| preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC
           25745]
 gi|122264965|sp|Q03D58|OXAA_PEDPA RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|116103721|gb|ABJ68864.1| Preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC
           25745]
          Length = 279

 Score =  125 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 116/249 (46%), Gaps = 29/249 (11%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
            +      ++       GN+G  I++ T+ ++++  PL   Q  +T     +QPK+ +L+
Sbjct: 40  IVYNFSRFIIYLSKLFGGNYGWGIIVFTIIIRIIILPLMIYQTRTTMKTAELQPKLKQLQ 99

Query: 401 EKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +K+        Q L++   +LY    +NP+AGC P+++Q+PV +A+Y  +S +  ++   
Sbjct: 100 QKYSSRDAESQQKLREEQQKLYAEAGVNPMAGCLPLIIQLPVMYALYAAVSRTQVLK-EG 158

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL----SMFIQMKMSPPPAD 513
            + W++ L+  DP                     I PI+ +L    S ++ MK  P  + 
Sbjct: 159 TFLWLQ-LSDKDPYF-------------------ILPILAALFTFMSTWLSMKSQPAGSQ 198

Query: 514 KGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
            G    + + MP+V +    +FPA + +YW  +N+  + Q  +I      +    +++++
Sbjct: 199 NGMTSAMTFGMPLVILITALNFPAAITLYWVVTNLFQVGQTLIIQNPFKIQKEREEKIQT 258

Query: 573 TFSKNYNSQ 581
             +K    +
Sbjct: 259 EKAKRKAIE 267


>gi|229087531|ref|ZP_04219663.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-44]
 gi|228695778|gb|EEL48631.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-44]
          Length = 260

 Score =  125 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 67/240 (27%), Positives = 114/240 (47%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF--VKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + V      I +  +   V+    PLA  QY S   MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHVPGASFGIAIIIITLIVRSAMIPLAISQYRSQMKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L+EK           +  QK M +L K    NPLAGC P+L+Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKEKHGDVRKDIEKQKQYQKEMSELMKAGGWNPLAGCLPLLIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           + E+R    + W+ +L  ADP +                   I PI+ +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPILAALTTFIQMKIMQ 194

Query: 510 PPADKGQAMILN-----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
                G+ + +       MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   + 
Sbjct: 195 SNTSAGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWVTGNLFTMTQMIVLRKVMERKE 254


>gi|312879852|ref|ZP_07739652.1| membrane protein insertase, YidC/Oxa1 family [Aminomonas
           paucivorans DSM 12260]
 gi|310783143|gb|EFQ23541.1| membrane protein insertase, YidC/Oxa1 family [Aminomonas
           paucivorans DSM 12260]
          Length = 253

 Score =  125 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 67/253 (26%), Positives = 123/253 (48%), Gaps = 24/253 (9%)

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           M   +++FY L  ++G+AI+L T+ V++L  PL+ KQ +S   M+ IQP++  ++EK+  
Sbjct: 1   MLGTLNFFYGLTHSYGLAIILLTLAVRVLLHPLSHKQLMSMQRMQKIQPRLKVIQEKYAG 60

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              + L + M++LYK + +NP AGC P+L+Q+P+F  +Y+V+    +   A F G   D 
Sbjct: 61  DKEK-LNQEMMKLYKENGVNPAAGCMPLLVQLPIFILLYRVLMQ-YDFAKATFLGVGLDT 118

Query: 466 AAADPTNIFTLFGILPFYLPGFM-----------------HVGIWPIIMSLSMFIQMKMS 508
           +A           +        +                  V I  +++    + Q ++S
Sbjct: 119 SALGALAAAVGMPVKNASFGSVLQGLAAHPEGLMRLDLYGPVVILIVLVGFLTWFQQRLS 178

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
               +   A +  +MP+   F   S P G+++YW  S+ IS+ QQ  +M     E+    
Sbjct: 179 SAN-NPQMAFLNWFMPLFMSFICLSLPGGVMLYWGSSSFISVAQQWRVMHKAEQEM---- 233

Query: 569 RLRSTFSKNYNSQ 581
           +++ T  KN   +
Sbjct: 234 QVKPTLHKNKPEE 246


>gi|229032660|ref|ZP_04188623.1| Membrane protein oxaA 2 [Bacillus cereus AH1271]
 gi|228728659|gb|EEL79672.1| Membrane protein oxaA 2 [Bacillus cereus AH1271]
          Length = 260

 Score =  125 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAISQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ ++   E 
Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMEREE 254


>gi|210624040|ref|ZP_03294157.1| hypothetical protein CLOHIR_02109 [Clostridium hiranonis DSM 13275]
 gi|210153247|gb|EEA84253.1| hypothetical protein CLOHIR_02109 [Clostridium hiranonis DSM 13275]
          Length = 235

 Score =  125 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 34/242 (14%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
               I K    ++   Y   G++G+AI+L T  VKLL  PL  KQ  ST  M+ I P+++
Sbjct: 1   MTNLIGKLFGNILGAIYGFTGSYGVAIILFTFLVKLLLMPLTIKQTKSTVAMQEITPRVN 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM---- 453
           E++EK+K +P     K +++LY+  NINP+AGC P+L+Q P+   ++ ++   + +    
Sbjct: 61  EIQEKYKNNPE-RQNKEIMELYQRANINPMAGCLPLLIQFPILIGLFNLLKDPVGLGAFA 119

Query: 454 ------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK- 506
                 +    + W+++L   D                      I  I+   S FI  K 
Sbjct: 120 SQAAFNQANGQFLWMQNLTNPDT---------------------ILAILSGASAFIMQKI 158

Query: 507 MSPPPADKGQAMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           M+P     GQ  ++ +M   +  +    FPAGL +YW+ SN+ +I+QQ ++ K   A+  
Sbjct: 159 MTPKEQVNGQMKMMTYMMAGLSFYWGFIFPAGLTLYWTISNIFAILQQVIVTKPLKAKFE 218

Query: 566 LI 567
             
Sbjct: 219 AD 220


>gi|324328956|gb|ADY24216.1| OxaA-like protein precursor [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 260

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKKKYGDVSKNLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ ++   E 
Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMEREE 254


>gi|297592067|gb|ADI46852.1| ALB3_1f [Volvox carteri f. nagariensis]
          Length = 474

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/320 (19%), Positives = 126/320 (39%), Gaps = 22/320 (6%)

Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327
            +       +LS G   Y  +         P  +    +   A A     +     D   
Sbjct: 44  GSEITLLTSHLSAGIPDYLDRADLLPTFSFPLANAGAASESVAAAVTANILSASPTDQRA 103

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
               +         +   +   +    ++  ++G +I+L T+ VK++ +PL K+Q  ST 
Sbjct: 104 GG-WVAPLADVLEQVLYVLKDCLD-LLHVPYSYGYSIILLTLIVKIVTYPLTKQQVESTL 161

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
            ++ ++P++D ++++F     + +QK    LY+   +NPLAGC P L   P+F  +Y  +
Sbjct: 162 AVQALKPRVDLIKDRFGDDKEK-IQKETSILYEQAGVNPLAGCLPTLATTPIFIGLYSSL 220

Query: 448 SISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI-----------WP 494
           +      +     + WI  LA               +  P                   P
Sbjct: 221 TNVANEGLLDTQGFYWIPSLAGPTTLAQRQSGLGTSWLFPLVDGAPAIGWDAAVAYLTLP 280

Query: 495 IIMSLSMFIQMKMSPPPADKG------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
           +++ L  +  +  + P +D        Q  +L  +PV+  +   + P+GL +Y+  + ++
Sbjct: 281 VLLILVQYASLYSTGPTSDATDVNARLQRALLLGLPVMIGWFALNVPSGLSLYYLSNTIL 340

Query: 549 SIVQQAVIMKMHGAEIGLID 568
           S  QQ  + K+ GA++ +  
Sbjct: 341 STAQQVYLKKLGGAKVAIKK 360


>gi|229542318|ref|ZP_04431378.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1]
 gi|229326738|gb|EEN92413.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1]
          Length = 262

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 34/228 (14%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    ++++     L G++G++I+L T+ ++L   PL   Q  S   M+ +QP+I +L
Sbjct: 39  YIVYPLSWLIIKAAQFLGGSYGLSIILITIIIRLAILPLNITQLKSAKAMQALQPEIKKL 98

Query: 400 REKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +EK+        Q LQ+ M++LY+ ++INP AGC PIL+Q+P+    Y  I+ +  +R  
Sbjct: 99  QEKYASKDAVTRQKLQQEMMKLYQEYHINPAAGCLPILIQMPILIGFYHAINRTPAIR-E 157

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP------ 510
             + W  DL + D                      +  +I  ++ F+Q K+         
Sbjct: 158 SAFLWF-DLGSVD---------------------YVLAVIAGITTFLQQKVMMSGGNYDA 195

Query: 511 -PADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            P  K Q  ++ W MP++ +      P+ L +YW   N+  IVQ   I
Sbjct: 196 NPQMKMQMNMMLWFMPIMIIVIGVGLPSALPLYWIVGNIFMIVQSYFI 243


>gi|229062687|ref|ZP_04199996.1| Membrane protein oxaA 2 [Bacillus cereus AH603]
 gi|228716657|gb|EEL68354.1| Membrane protein oxaA 2 [Bacillus cereus AH603]
          Length = 260

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 74/242 (30%), Positives = 127/242 (52%), Gaps = 37/242 (15%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWNHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            +  P ++ Q      I+  MP + +F   + P+GL++YW   N+ ++ Q  V+ ++   
Sbjct: 195 SNVTPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRVMER 252

Query: 563 EI 564
           E 
Sbjct: 253 EE 254


>gi|229163993|ref|ZP_04291932.1| Membrane protein oxaA 2 [Bacillus cereus R309803]
 gi|228619495|gb|EEK76382.1| Membrane protein oxaA 2 [Bacillus cereus R309803]
          Length = 260

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 73/242 (30%), Positives = 125/242 (51%), Gaps = 37/242 (15%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ V+    PLA  QY S   MK +QP
Sbjct: 36  IWNHYFVYPISYMIQFVAHHIPGASFGIAIIVITLVVRSAMIPLAVSQYRSQMKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L ++   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKKKYGDVSKDLEKQKQYQKEMSELMRSGGWNPLAGCWPIFIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            +    ++ Q      I+  MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   
Sbjct: 195 SNMASGEQSQMLKVQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMER 252

Query: 563 EI 564
           E 
Sbjct: 253 EE 254


>gi|289422592|ref|ZP_06424435.1| 60 kDa inner membrane insertion protein [Peptostreptococcus
           anaerobius 653-L]
 gi|289157164|gb|EFD05786.1| 60 kDa inner membrane insertion protein [Peptostreptococcus
           anaerobius 653-L]
          Length = 230

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 36/250 (14%)

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           IA  + +++   +  VG++G+AI+L T+ VK++  PL  KQ  ST  M  I PKI E++ 
Sbjct: 4   IANALGLVLKAIHTAVGSYGLAIILFTILVKIILMPLMVKQTKSTFAMSEINPKIKEIQA 63

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-----SISLEMRHA 456
           K+K   P+   + + +LYK  +INPL+GC P+L+Q+P+ FA++ V          E + A
Sbjct: 64  KYKN-KPEKQNEEISKLYKESDINPLSGCLPMLVQLPILFALFWVFRDPMKYGVFETKQA 122

Query: 457 -----PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
                  + W+K L   D                      I  I+  +S ++   ++  P
Sbjct: 123 FDAANVGFVWVKSLTKPD---------------------YILAILSGVSAYVMQMVT-VP 160

Query: 512 ADKGQ--AMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
            D+ Q    ++N+M P + +F   SFPA L +YW+ SN+ S++Q  +I K    ++    
Sbjct: 161 KDQMQGSMKVMNYMMPALSLFWGFSFPAALTLYWTVSNLFSVLQHKIITKPLKDKLIREK 220

Query: 569 RLRSTFSKNY 578
            L++    + 
Sbjct: 221 ELKANGKISK 230


>gi|237736113|ref|ZP_04566594.1| inner membrane protein YIDC [Fusobacterium mortiferum ATCC 9817]
 gi|229421824|gb|EEO36871.1| inner membrane protein YIDC [Fusobacterium mortiferum ATCC 9817]
          Length = 206

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 64/214 (29%), Positives = 119/214 (55%), Gaps = 21/214 (9%)

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +  L+   Y+L GNFG+AI+L T+ +K++  PL  KQ  S  +MK +QP+I++++++++ 
Sbjct: 12  ISALLHLMYSLTGNFGVAIILATIVIKIILLPLTLKQDKSMKSMKVLQPEIEKIKQQYQN 71

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
             P+++ +  ++LY+ H +NP+ GC P+L+Q+P+ +A++ V+   + +     + W++ L
Sbjct: 72  -DPKMMNQKTMELYQKHKVNPMGGCLPLLIQLPILWALFGVLRDPVTVPQDSTFLWMQ-L 129

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525
              DP                     I PI+  +  F+Q K+     +     ++   P+
Sbjct: 130 VNPDPYY-------------------ILPILNGVVSFLQQKVMGSSDNPQMKNMMYMFPL 170

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           + VF     PAGL IYW  S+V ++VQQ +IMK 
Sbjct: 171 MMVFISYKMPAGLQIYWLASSVAAVVQQYLIMKK 204


>gi|240254150|ref|NP_173858.5| ALB4 (ALBINA 4) [Arabidopsis thaliana]
 gi|223590242|sp|Q9FYL3|ALB31_ARATH RecName: Full=ALBINO3-like protein 1, chloroplastic; AltName:
           Full=Arabidopsis thaliana envelope membrane integrase;
           AltName: Full=Protein ALBINA 4; Short=Ath4; AltName:
           Full=Protein ARTEMIS; Flags: Precursor
 gi|91680591|emb|CAJ45566.1| Alb protein [Arabidopsis thaliana]
 gi|332192418|gb|AEE30539.1| ALBINO3-like protein 1 [Arabidopsis thaliana]
          Length = 499

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 26/274 (9%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
                WF  IA  M  ++          ++  ++G AI+L TV VK   FPL KKQ  S 
Sbjct: 91  TQSNDWFSGIANYMETILKVLKDGLSTVHVPYSYGFAIILLTVLVKAATFPLTKKQVESA 150

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
             MK++ P+I  ++E++     ++      +LYK   INPLAGC P L  IPV+  +Y+ 
Sbjct: 151 MAMKSLTPQIKAIQERYAGDQEKIQL-ETARLYKLAGINPLAGCLPTLATIPVWIGLYRA 209

Query: 447 ISI-SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWP 494
           +S  + E      + WI  LA           + I  LF    G  P   P  +   + P
Sbjct: 210 LSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFIEGHPPLGWPDTLAYLVLP 269

Query: 495 IIMSLSMF--IQMKMSPPPADKGQ---AMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
           +++  S +  IQ+  S    D        +   +P++  +   S P+GL +YW  +N++S
Sbjct: 270 LLLVFSQYLSIQIMQSSQSNDPAMKSSQAVTKLLPLMIGYFALSVPSGLSLYWLTNNILS 329

Query: 550 IVQQAVIMKMHGAE--IGLIDRLRSTFSKNYNSQ 581
             QQ  + K  GA+  +     L +   K    +
Sbjct: 330 TAQQVWLQKYGGAKNPVEKFTNLVTKEDKTQQIE 363


>gi|259500780|ref|ZP_05743682.1| SpoIIIJ family protein [Lactobacillus iners DSM 13335]
 gi|315654127|ref|ZP_07907043.1| SpoIIIJ family protein [Lactobacillus iners ATCC 55195]
 gi|259167474|gb|EEW51969.1| SpoIIIJ family protein [Lactobacillus iners DSM 13335]
 gi|315488823|gb|EFU78469.1| SpoIIIJ family protein [Lactobacillus iners ATCC 55195]
          Length = 296

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 57/301 (18%), Positives = 122/301 (40%), Gaps = 32/301 (10%)

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
            ++ ++    K I     +   +           + ++P         W  +I   +   
Sbjct: 6   VSDFLSKKNLKKIIVIATILLISLTITGCVSTSSNGSVPPLSNNSGSFWDRYILYYISSF 65

Query: 350 MSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP- 407
           + +   ++ N +G +I++ T+ V+++  PL      S A  +++QP+++ LR+K+     
Sbjct: 66  ILWLAAILHNAYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEMEALRKKYSDRDA 125

Query: 408 --PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
              + LQ+   +LYK   +NP  GC P+L+Q+P+  A+++ I  + E+     + W+ DL
Sbjct: 126 ETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRTPEL-QNGRFLWM-DL 183

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-----QMKMSPPPADKGQAMIL 520
              DP                     + PI+ ++  FI     Q+  +    +     + 
Sbjct: 184 GHPDPYM-------------------VMPILAAIFTFIASYIGQLSQAKSSNNAMTKGMT 224

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
             MPV       S  + L +YW  SN+   +Q   +   +  +     +L+    K   +
Sbjct: 225 YVMPVFIGVMACSLQSALSLYWVISNLFQAIQTFFLQ--NPIKYYRELKLKQLQEKERKA 282

Query: 581 Q 581
           +
Sbjct: 283 K 283


>gi|228988273|ref|ZP_04148368.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228771445|gb|EEM19916.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 262

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 38  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 98  ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   E 
Sbjct: 197 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 256


>gi|229118494|ref|ZP_04247848.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-3]
 gi|228665064|gb|EEL20552.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-3]
          Length = 260

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   E 
Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 254


>gi|228923750|ref|ZP_04087028.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228835879|gb|EEM81242.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 260

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHISGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   E 
Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 254


>gi|229094136|ref|ZP_04225216.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-42]
 gi|228689239|gb|EEL43060.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-42]
          Length = 262

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 129/240 (53%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 38  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 98  ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 158 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ +++Q  V+ K+   E 
Sbjct: 197 SNSTPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 256


>gi|42784207|ref|NP_981454.1| OxaA-like protein precursor [Bacillus cereus ATCC 10987]
 gi|42740138|gb|AAS44062.1| stage III sporulation protein J [Bacillus cereus ATCC 10987]
          Length = 260

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 72/240 (30%), Positives = 126/240 (52%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +    ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ ++   E 
Sbjct: 195 SNITAGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMEREE 254


>gi|228910857|ref|ZP_04074666.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 200]
 gi|228848808|gb|EEM93653.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 200]
          Length = 262

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 38  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 98  ELQKLKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   E 
Sbjct: 197 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 256


>gi|218900170|ref|YP_002448581.1| stage III sporulation protein J [Bacillus cereus G9842]
 gi|218542481|gb|ACK94875.1| stage III sporulation protein J [Bacillus cereus G9842]
          Length = 260

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 37/242 (15%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            +  P ++ Q      I+  MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   
Sbjct: 195 SNITPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMER 252

Query: 563 EI 564
           E 
Sbjct: 253 EE 254


>gi|229551109|ref|ZP_04439834.1| stage III sporulation protein [Lactobacillus rhamnosus LMS2-1]
 gi|229315570|gb|EEN81543.1| stage III sporulation protein [Lactobacillus rhamnosus LMS2-1]
          Length = 287

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 21/252 (8%)

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           P  E    +   Y +      ++       GN G+ I+  T+ +++L FPL+     S A
Sbjct: 38  PVSENSTGFWDRYVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYLSIKSMA 97

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
             + I P++ EL++K+     +   K      +LY +  +NP+ GC PI++Q+P   A+Y
Sbjct: 98  KQQEIAPQLKELQKKYSSKDTETQTKLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALY 157

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           + I  +  +  +  + W+ +L+  DP  I                  I   + +L   I 
Sbjct: 158 QAILRTSSL-QSGTFLWM-NLSQPDPLWIMQ----------------ILATLFTLGTSIL 199

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
             M+ P  +    +++   P +      + P+ L IYW  +N  S+VQQ +I        
Sbjct: 200 SMMAQPTRNSSSWVMMIISPAMIFVFSVTLPSALAIYWVVTNAFSMVQQLLIQNPFKIRR 259

Query: 565 GLIDRLRSTFSK 576
              ++ R+   K
Sbjct: 260 EREEKARAEKEK 271


>gi|229020261|ref|ZP_04177030.1| Membrane protein oxaA 2 [Bacillus cereus AH1273]
 gi|229026485|ref|ZP_04182840.1| Membrane protein oxaA 2 [Bacillus cereus AH1272]
 gi|228734793|gb|EEL85433.1| Membrane protein oxaA 2 [Bacillus cereus AH1272]
 gi|228741014|gb|EEL91243.1| Membrane protein oxaA 2 [Bacillus cereus AH1273]
          Length = 262

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 125/242 (51%), Gaps = 37/242 (15%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ V+    PLA  QY S   MK +QP
Sbjct: 38  IWNHYFVYPISFMIQFVAHHIPGGSFGIAIIVITLVVRSAMIPLAVSQYRSQMKMKKMQP 97

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K           +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 98  ELQKLKKKHGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196

Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            +  P ++ Q      I+  MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   
Sbjct: 197 SNVTPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMER 254

Query: 563 EI 564
           E 
Sbjct: 255 EE 256


>gi|229014209|ref|ZP_04171330.1| Membrane protein oxaA 2 [Bacillus mycoides DSM 2048]
 gi|229169740|ref|ZP_04297440.1| Membrane protein oxaA 2 [Bacillus cereus AH621]
 gi|228613779|gb|EEK70904.1| Membrane protein oxaA 2 [Bacillus cereus AH621]
 gi|228747163|gb|EEL97045.1| Membrane protein oxaA 2 [Bacillus mycoides DSM 2048]
          Length = 260

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 37/242 (15%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWNHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            +  P ++ Q      I+  MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   
Sbjct: 195 SNVTPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMER 252

Query: 563 EI 564
           E 
Sbjct: 253 EE 254


>gi|257878643|ref|ZP_05658296.1| inner membrane protein [Enterococcus faecium 1,230,933]
 gi|257881309|ref|ZP_05660962.1| inner membrane protein [Enterococcus faecium 1,231,502]
 gi|257885584|ref|ZP_05665237.1| inner membrane protein [Enterococcus faecium 1,231,501]
 gi|257890526|ref|ZP_05670179.1| inner membrane protein [Enterococcus faecium 1,231,410]
 gi|257893101|ref|ZP_05672754.1| inner membrane protein [Enterococcus faecium 1,231,408]
 gi|258615273|ref|ZP_05713043.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Enterococcus faecium
           DO]
 gi|260558224|ref|ZP_05830420.1| inner membrane protein [Enterococcus faecium C68]
 gi|261206914|ref|ZP_05921603.1| inner membrane protein [Enterococcus faecium TC 6]
 gi|289566509|ref|ZP_06446933.1| preprotein translocase YidC subunit [Enterococcus faecium D344SRF]
 gi|293553544|ref|ZP_06674171.1| membrane protein OxaA 1 [Enterococcus faecium E1039]
 gi|293563248|ref|ZP_06677700.1| membrane protein OxaA 1 [Enterococcus faecium E1162]
 gi|293569162|ref|ZP_06680468.1| membrane protein OxaA 1 [Enterococcus faecium E1071]
 gi|294616662|ref|ZP_06696433.1| membrane protein OxaA 1 [Enterococcus faecium E1636]
 gi|294619742|ref|ZP_06699147.1| membrane protein OxaA 1 [Enterococcus faecium E1679]
 gi|294623756|ref|ZP_06702584.1| membrane protein OxaA 1 [Enterococcus faecium U0317]
 gi|314940134|ref|ZP_07847314.1| putative stage III sporulation protein J [Enterococcus faecium
           TX0133a04]
 gi|314943035|ref|ZP_07849839.1| putative stage III sporulation protein J [Enterococcus faecium
           TX0133C]
 gi|314948153|ref|ZP_07851549.1| putative stage III sporulation protein J [Enterococcus faecium
           TX0082]
 gi|314953433|ref|ZP_07856351.1| putative stage III sporulation protein J [Enterococcus faecium
           TX0133A]
 gi|314993828|ref|ZP_07859164.1| putative stage III sporulation protein J [Enterococcus faecium
           TX0133B]
 gi|314998147|ref|ZP_07863029.1| putative stage III sporulation protein J [Enterococcus faecium
           TX0133a01]
 gi|257812871|gb|EEV41629.1| inner membrane protein [Enterococcus faecium 1,230,933]
 gi|257816967|gb|EEV44295.1| inner membrane protein [Enterococcus faecium 1,231,502]
 gi|257821440|gb|EEV48570.1| inner membrane protein [Enterococcus faecium 1,231,501]
 gi|257826886|gb|EEV53512.1| inner membrane protein [Enterococcus faecium 1,231,410]
 gi|257829480|gb|EEV56087.1| inner membrane protein [Enterococcus faecium 1,231,408]
 gi|260075398|gb|EEW63704.1| inner membrane protein [Enterococcus faecium C68]
 gi|260078542|gb|EEW66244.1| inner membrane protein [Enterococcus faecium TC 6]
 gi|289161718|gb|EFD09594.1| preprotein translocase YidC subunit [Enterococcus faecium D344SRF]
 gi|291588131|gb|EFF19973.1| membrane protein OxaA 1 [Enterococcus faecium E1071]
 gi|291590482|gb|EFF22220.1| membrane protein OxaA 1 [Enterococcus faecium E1636]
 gi|291594012|gb|EFF25481.1| membrane protein OxaA 1 [Enterococcus faecium E1679]
 gi|291596710|gb|EFF27933.1| membrane protein OxaA 1 [Enterococcus faecium U0317]
 gi|291602299|gb|EFF32524.1| membrane protein OxaA 1 [Enterococcus faecium E1039]
 gi|291604787|gb|EFF34269.1| membrane protein OxaA 1 [Enterococcus faecium E1162]
 gi|313587859|gb|EFR66704.1| putative stage III sporulation protein J [Enterococcus faecium
           TX0133a01]
 gi|313591719|gb|EFR70564.1| putative stage III sporulation protein J [Enterococcus faecium
           TX0133B]
 gi|313594536|gb|EFR73381.1| putative stage III sporulation protein J [Enterococcus faecium
           TX0133A]
 gi|313598235|gb|EFR77080.1| putative stage III sporulation protein J [Enterococcus faecium
           TX0133C]
 gi|313640639|gb|EFS05219.1| putative stage III sporulation protein J [Enterococcus faecium
           TX0133a04]
 gi|313645407|gb|EFS09987.1| putative stage III sporulation protein J [Enterococcus faecium
           TX0082]
          Length = 272

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 27/207 (13%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQK 413
            GN GI I+L T+ ++++  PL   Q  S    + +QPK+  L++++    P+    L++
Sbjct: 53  FGNAGIGIILFTLIIRVILLPLMHFQTKSMRKTQELQPKLKALQQQYSSRDPETQSKLRE 112

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
              +LY  + +NP AGC P+L+Q+P+  A+++ IS   E++    + W+ +L  ADPT  
Sbjct: 113 EQQRLYAENGVNPYAGCLPLLVQMPILMALWQSISRVPELKQ-GHFLWL-NLGNADPTF- 169

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNW-MPVVFVFA 530
                             I PI+ ++  F    +S            I+N+ MPV+ +  
Sbjct: 170 ------------------ILPILAAIFTFASTYLSSMSQIESNASMKIMNFVMPVMILVM 211

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIM 557
             +  +GL +YW  SN   +VQ  +I 
Sbjct: 212 GVNLASGLSLYWVVSNAFQVVQTLLIN 238


>gi|229199168|ref|ZP_04325850.1| Membrane protein oxaA 2 [Bacillus cereus m1293]
 gi|228584311|gb|EEK42447.1| Membrane protein oxaA 2 [Bacillus cereus m1293]
          Length = 262

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 38  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 98  ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ ++   E 
Sbjct: 197 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMEREE 256


>gi|224100107|ref|XP_002311746.1| 60 kDa inner membrane protein [Populus trichocarpa]
 gi|222851566|gb|EEE89113.1| 60 kDa inner membrane protein [Populus trichocarpa]
          Length = 281

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++   +G AI+L TV VK   FPL+KKQ  S   M+++QP+I  +++ +     + +Q  
Sbjct: 57  HVPYAYGFAIILLTVLVKAATFPLSKKQVESAMAMRSLQPQIKAVQQLYAG-DQERIQLE 115

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470
             +LYK   INPLAGC P L  IPV+  +Y+ +S  + E      + WI  LA       
Sbjct: 116 TARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAE 175

Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMF--IQMKMSPPPADKG---QA 517
               + I  LF    G  P      +   + P ++ +  +  +Q+  S    D       
Sbjct: 176 RQNGSGISWLFPFVDGQPPLGWSDTVAYLVLPAMLVVLQYMSVQIMQSSQSDDPNVKNSQ 235

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            I+ ++P++  +   S P+GL +YW  +N++S  QQ  + K+ GA+
Sbjct: 236 AIMKFLPLMIGYFSLSVPSGLSLYWLTNNILSTTQQVWLQKLGGAK 281


>gi|164686450|ref|ZP_02210478.1| hypothetical protein CLOBAR_00015 [Clostridium bartlettii DSM
           16795]
 gi|164604461|gb|EDQ97926.1| hypothetical protein CLOBAR_00015 [Clostridium bartlettii DSM
           16795]
          Length = 254

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 16/231 (6%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
               I   + +++ +  N+VG++  +I++ T+ V+L   PL  KQ  ST  M++IQPK+ 
Sbjct: 1   MLNAIGNFLGVILGFIVNIVGDYAWSIIIFTILVRLCLMPLMIKQIKSTKAMQDIQPKMQ 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           E++EK+K   P+  Q+ +++LYK   INP+AGC P+ +Q+P+   ++ ++   +      
Sbjct: 61  EIQEKYKN-KPEKQQEELMKLYKDAKINPMAGCLPMFIQLPILMGLFALLRDPVA----- 114

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
                  + A +        G L        H     I+  +S +   K S    D+ QA
Sbjct: 115 -----HGVFATEAAYHAANHGFLWIASVSQTHNLSLGILSGVSAYFMQK-SMATTDESQA 168

Query: 518 MILNWMPVVFVFALSS----FPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            ++  M +V           + AGL +YW+ SN+ SI Q  ++     A++
Sbjct: 169 QMMKSMTLVMTAMSFWWGYTYEAGLALYWTMSNIFSIAQYYLVTSPLKAKM 219


>gi|299117626|emb|CBN75468.1| Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus
           siliculosus]
          Length = 449

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 21/232 (9%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +GI+I+  T+FVK + FPL  +Q  ST  M+ + PK+ EL+ ++  +P +   +A+ QLY
Sbjct: 136 YGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNP-EAANQAVQQLY 194

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAAD----PTNIF 474
           +T N+NPLAGC P L QIP+F ++Y+ +   + E +    + WI  L        PT + 
Sbjct: 195 QTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMM 254

Query: 475 TLF-----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ---------AMIL 520
           +       G         +     PII+ ++  I  ++  P  D  Q           I+
Sbjct: 255 SWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNIV 314

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
            ++P++  +   S P+ L +YW  +N IS      I +   A+      +++
Sbjct: 315 KFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFI-RNQIADETGDPNMKA 365


>gi|309807784|ref|ZP_07701716.1| putative stage III sporulation protein J [Lactobacillus iners
           LactinV 01V1-a]
 gi|308168886|gb|EFO70972.1| putative stage III sporulation protein J [Lactobacillus iners
           LactinV 01V1-a]
          Length = 294

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 55/271 (20%), Positives = 114/271 (42%), Gaps = 32/271 (11%)

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPL 378
               + ++P         W  +I   +   + +   ++ N +G +I++ T+ V+++  PL
Sbjct: 31  STSSNGSVPPLSNNSGSFWDRYILYYISSFILWLAAILHNAYGWSIVVFTIIVRVVLLPL 90

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILL 435
                 S A  +++QP+++ LR+K+        + LQ+   +LYK   +NP  GC P+L+
Sbjct: 91  NAISIKSMAKQQSLQPEMEALRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLI 150

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           Q+P+  A+++ I  + E+     + W+ DL   DP                     + PI
Sbjct: 151 QMPIMIALWQAILRTPEL-QNGRFLWM-DLGHPDPYM-------------------VMPI 189

Query: 496 IMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           + ++  FI     Q+  +    +     +   MPV       S  + L +YW  SN+   
Sbjct: 190 LAAIFTFIASYIGQLSQAKSSNNAMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQA 249

Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +Q   +   +  +     +L+    K   ++
Sbjct: 250 IQTFFLQ--NPIKYYRELKLKQLQEKERKAK 278


>gi|229076403|ref|ZP_04209368.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-18]
 gi|229099477|ref|ZP_04230406.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-29]
 gi|229105635|ref|ZP_04236268.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-28]
 gi|228677771|gb|EEL32015.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-28]
 gi|228683973|gb|EEL37922.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-29]
 gi|228706838|gb|EEL59046.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-18]
          Length = 262

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 38  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 98  ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   E 
Sbjct: 197 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 256


>gi|302190769|ref|ZP_07267023.1| stage III sporulation protein J [Lactobacillus iners AB-1]
 gi|309804034|ref|ZP_07698115.1| putative stage III sporulation protein J [Lactobacillus iners
           LactinV 11V1-d]
 gi|312871192|ref|ZP_07731290.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
           3008A-a]
 gi|312872789|ref|ZP_07732854.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
           2062A-h1]
 gi|312874783|ref|ZP_07734802.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
           2053A-b]
 gi|325913658|ref|ZP_08176020.1| putative stage III sporulation protein J [Lactobacillus iners UPII
           60-B]
 gi|329919822|ref|ZP_08276773.1| putative stage III sporulation protein J [Lactobacillus iners SPIN
           1401G]
 gi|308163802|gb|EFO66068.1| putative stage III sporulation protein J [Lactobacillus iners
           LactinV 11V1-d]
 gi|311089528|gb|EFQ47953.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
           2053A-b]
 gi|311091831|gb|EFQ50210.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
           2062A-h1]
 gi|311093206|gb|EFQ51552.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
           3008A-a]
 gi|325477017|gb|EGC80167.1| putative stage III sporulation protein J [Lactobacillus iners UPII
           60-B]
 gi|328937169|gb|EGG33597.1| putative stage III sporulation protein J [Lactobacillus iners SPIN
           1401G]
          Length = 291

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 55/271 (20%), Positives = 114/271 (42%), Gaps = 32/271 (11%)

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPL 378
               + ++P         W  +I   +   + +   ++ N +G +I++ T+ V+++  PL
Sbjct: 31  STSSNGSVPPLSNNSGSFWDRYILYYISSFILWLAAILHNAYGWSIVVFTIIVRVVLLPL 90

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILL 435
                 S A  +++QP+++ LR+K+        + LQ+   +LYK   +NP  GC P+L+
Sbjct: 91  NAISIKSMAKQQSLQPEMEALRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLI 150

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           Q+P+  A+++ I  + E+     + W+ DL   DP                     + PI
Sbjct: 151 QMPIMIALWQAILRTPEL-QNGRFLWM-DLGHPDPYM-------------------VMPI 189

Query: 496 IMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           + ++  FI     Q+  +    +     +   MPV       S  + L +YW  SN+   
Sbjct: 190 LAAIFTFIASYIGQLSQAKSSNNAMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQA 249

Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +Q   +   +  +     +L+    K   ++
Sbjct: 250 IQTFFLQ--NPIKYYRELKLKQLQEKERKAK 278


>gi|309804916|ref|ZP_07698978.1| putative stage III sporulation protein J [Lactobacillus iners
           LactinV 09V1-c]
 gi|309809716|ref|ZP_07703570.1| putative stage III sporulation protein J [Lactobacillus iners SPIN
           2503V10-D]
 gi|312873301|ref|ZP_07733356.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
           2052A-d]
 gi|308165855|gb|EFO68076.1| putative stage III sporulation protein J [Lactobacillus iners
           LactinV 09V1-c]
 gi|308169895|gb|EFO71934.1| putative stage III sporulation protein J [Lactobacillus iners SPIN
           2503V10-D]
 gi|311091181|gb|EFQ49570.1| putative stage III sporulation protein J [Lactobacillus iners LEAF
           2052A-d]
          Length = 291

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 55/271 (20%), Positives = 114/271 (42%), Gaps = 32/271 (11%)

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPL 378
               + ++P         W  +I   +   + +   ++ N +G +I++ T+ V+++  PL
Sbjct: 31  STSSNGSVPPLSNNSGSFWDRYILYYISSFILWLATILHNAYGWSIVVFTIIVRVVLLPL 90

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILL 435
                 S A  +++QP+++ LR+K+        + LQ+   +LYK   +NP  GC P+L+
Sbjct: 91  NAISIKSMAKQQSLQPEMEALRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLI 150

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           Q+P+  A+++ I  + E+     + W+ DL   DP                     + PI
Sbjct: 151 QMPIMIALWQAILRTPEL-QNGRFLWM-DLGHPDPYM-------------------VMPI 189

Query: 496 IMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           + ++  FI     Q+  +    +     +   MPV       S  + L +YW  SN+   
Sbjct: 190 LAAIFTFIASYIGQLSQAKSSNNAMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQA 249

Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +Q   +   +  +     +L+    K   ++
Sbjct: 250 IQTFFLQ--NPIKYYRELKLKQLQEKERKAK 278


>gi|163942740|ref|YP_001647624.1| OxaA-like protein precursor [Bacillus weihenstephanensis KBAB4]
 gi|163864937|gb|ABY45996.1| 60 kDa inner membrane insertion protein [Bacillus
           weihenstephanensis KBAB4]
          Length = 260

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 37/242 (15%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWNHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKQKYGDVGKNLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            +  P ++ Q      I+  MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   
Sbjct: 195 SNVTPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMER 252

Query: 563 EI 564
           E 
Sbjct: 253 EE 254


>gi|30265065|ref|NP_847442.1| OxaA-like protein precursor [Bacillus anthracis str. Ames]
 gi|47530571|ref|YP_021920.1| OxaA-like protein precursor [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187877|ref|YP_031130.1| OxaA-like protein precursor [Bacillus anthracis str. Sterne]
 gi|165870877|ref|ZP_02215529.1| stage III sporulation protein J [Bacillus anthracis str. A0488]
 gi|167634953|ref|ZP_02393271.1| stage III sporulation protein J [Bacillus anthracis str. A0442]
 gi|167639999|ref|ZP_02398267.1| stage III sporulation protein J [Bacillus anthracis str. A0193]
 gi|170685875|ref|ZP_02877098.1| stage III sporulation protein J [Bacillus anthracis str. A0465]
 gi|170707039|ref|ZP_02897496.1| stage III sporulation protein J [Bacillus anthracis str. A0389]
 gi|177652211|ref|ZP_02934714.1| stage III sporulation protein J [Bacillus anthracis str. A0174]
 gi|190567249|ref|ZP_03020164.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I]
 gi|196032983|ref|ZP_03100396.1| stage III sporulation protein J [Bacillus cereus W]
 gi|218906219|ref|YP_002454053.1| stage III sporulation protein J [Bacillus cereus AH820]
 gi|227817795|ref|YP_002817804.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684]
 gi|229601480|ref|YP_002869262.1| stage III sporulation protein J [Bacillus anthracis str. A0248]
 gi|254687356|ref|ZP_05151213.1| OxaA-like protein precursor [Bacillus anthracis str. CNEVA-9066]
 gi|254725369|ref|ZP_05187152.1| OxaA-like protein precursor [Bacillus anthracis str. A1055]
 gi|254733735|ref|ZP_05191451.1| OxaA-like protein precursor [Bacillus anthracis str. Western North
           America USA6153]
 gi|254740573|ref|ZP_05198264.1| OxaA-like protein precursor [Bacillus anthracis str. Kruger B]
 gi|254753165|ref|ZP_05205201.1| OxaA-like protein precursor [Bacillus anthracis str. Vollum]
 gi|254761508|ref|ZP_05213529.1| OxaA-like protein precursor [Bacillus anthracis str. Australia 94]
 gi|38502946|sp|Q81XH4|OXAA2_BACAN RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|30259742|gb|AAP28928.1| stage III sporulation protein J [Bacillus anthracis str. Ames]
 gi|47505719|gb|AAT34395.1| stage III sporulation protein J [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49181804|gb|AAT57180.1| stage III sporulation protein J [Bacillus anthracis str. Sterne]
 gi|164713386|gb|EDR18911.1| stage III sporulation protein J [Bacillus anthracis str. A0488]
 gi|167512080|gb|EDR87458.1| stage III sporulation protein J [Bacillus anthracis str. A0193]
 gi|167529703|gb|EDR92452.1| stage III sporulation protein J [Bacillus anthracis str. A0442]
 gi|170128142|gb|EDS97012.1| stage III sporulation protein J [Bacillus anthracis str. A0389]
 gi|170670339|gb|EDT21079.1| stage III sporulation protein J [Bacillus anthracis str. A0465]
 gi|172082217|gb|EDT67283.1| stage III sporulation protein J [Bacillus anthracis str. A0174]
 gi|190561753|gb|EDV15723.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I]
 gi|195994412|gb|EDX58367.1| stage III sporulation protein J [Bacillus cereus W]
 gi|218540128|gb|ACK92526.1| stage III sporulation protein J [Bacillus cereus AH820]
 gi|227006381|gb|ACP16124.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684]
 gi|229265888|gb|ACQ47525.1| stage III sporulation protein J [Bacillus anthracis str. A0248]
          Length = 260

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +    ++ Q + +    MP + +F   + P+GL++YW   N+ +++Q  V+ K+   E 
Sbjct: 195 SNSTSGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 254


>gi|256391922|ref|YP_003113486.1| hypothetical protein Caci_2731 [Catenulispora acidiphila DSM 44928]
 gi|256358148|gb|ACU71645.1| 60 kDa inner membrane insertion protein [Catenulispora acidiphila
           DSM 44928]
          Length = 334

 Score =  123 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 110/263 (41%), Gaps = 30/263 (11%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
              +I    F  +         +      ++ ++I+  T+ ++    PL +KQ  S  +M
Sbjct: 8   LNPIIWAVSFVMVLWHRVFGAIFGEGSSVSWVLSILFLTITIRAAMIPLFRKQIKSMQHM 67

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP++  L++K+K    Q LQ+  ++LYK +  +P A C PIL+Q+P F A+Y+V+S 
Sbjct: 68  QRLQPQLQALQKKYKLDK-QKLQQETMKLYKDNGTSPFASCIPILVQLPFFTALYRVLSH 126

Query: 450 SLEMR--------HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF----------MHVG 491
           +   R         A          A  P   FT    L     G           +   
Sbjct: 127 AASGRAVGALSQADATNIQHSTFFGAPIPLRFFTTQTYLNTAANGQFAHTSLVNLRIVAL 186

Query: 492 IWPIIMSLSMFIQMKMS-----------PPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
           +  ++ + S F+  +M            P P  + Q ++L  MPV  +F   S   G+++
Sbjct: 187 VMVVLYAASQFLTQRMMLTKNTNLDNSVPNPMMQSQKIMLYVMPVGMLFFGLSVQIGVVL 246

Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563
           Y   +NV +I QQ   ++     
Sbjct: 247 YLMTTNVWTIGQQFYTLRNSPVP 269


>gi|228917653|ref|ZP_04081195.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228842030|gb|EEM87135.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 262

 Score =  123 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 72/239 (30%), Positives = 124/239 (51%), Gaps = 31/239 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           W  ++       + +   +    +FGIAI++ T+ ++    PLA  QY S A MK +QP+
Sbjct: 39  WDHYFVYPISFMIQLVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98

Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           + +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS +
Sbjct: 99  LQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 158

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507
            E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+   
Sbjct: 159 EEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQS 197

Query: 508 SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           +    ++ Q + +    MP + +F   + P+GL++YW   N+ +++Q  V+ K+   E 
Sbjct: 198 NSTSGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 256


>gi|309805916|ref|ZP_07699948.1| putative stage III sporulation protein J [Lactobacillus iners
           LactinV 03V1-b]
 gi|325912298|ref|ZP_08174695.1| putative stage III sporulation protein J [Lactobacillus iners UPII
           143-D]
 gi|308167692|gb|EFO69839.1| putative stage III sporulation protein J [Lactobacillus iners
           LactinV 03V1-b]
 gi|325475957|gb|EGC79126.1| putative stage III sporulation protein J [Lactobacillus iners UPII
           143-D]
          Length = 291

 Score =  123 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/271 (20%), Positives = 114/271 (42%), Gaps = 32/271 (11%)

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPL 378
               + ++P         W  +I   +   + +   ++ N +G +I++ T+ V+++  PL
Sbjct: 31  STSSNGSVPPLSNNSGSFWDRYILYYISSFILWLAAILHNAYGWSIVVFTIIVRVVLLPL 90

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILL 435
                 S A  +++QP+++ LR+K+        + LQ+   +LYK   +NP  GC P+L+
Sbjct: 91  NAISIKSMAKQQSLQPEMEALRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLI 150

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           Q+P+  A+++ I  + E+     + W+ DL   DP                     + PI
Sbjct: 151 QMPIMIALWQAILRTPEL-QNGRFLWM-DLGHPDPYM-------------------VMPI 189

Query: 496 IMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           + ++  FI     Q+  +    +     +   MPV       S  + L +YW  SN+   
Sbjct: 190 LAAIFTFIASYIGQLSQAKSSNNAMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQA 249

Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +Q   +   +  +     +L+    K   ++
Sbjct: 250 IQTFFLQ--NPIKYYRELKLKQMQEKERKAK 278


>gi|196047512|ref|ZP_03114722.1| stage III sporulation protein J [Bacillus cereus 03BB108]
 gi|225867005|ref|YP_002752383.1| stage III sporulation protein J [Bacillus cereus 03BB102]
 gi|196021626|gb|EDX60323.1| stage III sporulation protein J [Bacillus cereus 03BB108]
 gi|225786361|gb|ACO26578.1| stage III sporulation protein J [Bacillus cereus 03BB102]
          Length = 260

 Score =  123 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 129/240 (53%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ +++Q  V+ K+   E 
Sbjct: 195 SNSTPVEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 254


>gi|281412770|ref|YP_003346849.1| membrane protein insertase, YidC/Oxa1 family [Thermotoga
           naphthophila RKU-10]
 gi|281373873|gb|ADA67435.1| membrane protein insertase, YidC/Oxa1 family [Thermotoga
           naphthophila RKU-10]
          Length = 443

 Score =  123 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 73/399 (18%), Positives = 154/399 (38%), Gaps = 32/399 (8%)

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
            + +    +  F ++D  T  ++ +         +        +          +   K+
Sbjct: 59  RKHVFTYGNDGFDVLDEGTPLTVIEEPIVTGVGKVSEGFSDEVSIVYNYGYVKKIFTIKN 118

Query: 229 LVEQKYSDIEK--SSISNFHESNSWLGISDKYWASVFIPSKETSFH-SQFKYLSDGHARY 285
                +    +    +       S    +D+Y  + F      +      K+        
Sbjct: 119 DENYTFFVDIESSKPVEVTVPRVSVDTSTDRYLENYFASFNPGTRTLVLLKHDEGLLFEG 178

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
             K +  +  I+       T    A  +++  +      + IP F       W+  +   
Sbjct: 179 TLKINGQKRFIVFMGPNKRTLIKKAFPEDYDVLIKAL--VKIPGFNK-----WYDPVFYG 231

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +     +  +L  NFG AI+L T+ V+L+ +PL   Q  S  NM+ +QP+I+ +++K+K 
Sbjct: 232 LVWFFWWLKDLTKNFGWAIVLFTLIVRLILYPLYHAQTKSLINMRKLQPQIEAIKKKYKD 291

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-MRHAPFWGWIKD 464
              Q  Q+A+++LY+   +NP +GC  +L+Q+P+F  ++ VI   +E   ++  +   KD
Sbjct: 292 PTKQ--QEALLKLYREAGVNPASGCLMLLIQLPIFMLLWSVIRYYVEEFAYSGNFLIWKD 349

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+A   +N +                    II  ++ +    ++   A      I   M 
Sbjct: 350 LSAGGFSNNWLFL-----------------IITIVASYYTTLLTSQDARTAWQGI--IMS 390

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           V+F F     P+GL +Y++ + +I +       K +  +
Sbjct: 391 VIFPFLFVGLPSGLFLYYATNTLIQLAVTYYTYKRYKIK 429


>gi|229135853|ref|ZP_04264621.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST196]
 gi|228647593|gb|EEL03660.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST196]
          Length = 262

 Score =  123 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 37/242 (15%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 38  IWNHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 98  ELQKLKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196

Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            +  P ++ Q      I+  MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   
Sbjct: 197 SNVTPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMER 254

Query: 563 EI 564
           E 
Sbjct: 255 EE 256


>gi|228968133|ref|ZP_04129137.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228791568|gb|EEM39166.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 262

 Score =  123 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 37/242 (15%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 38  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 98  ELQKLKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196

Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            +  P ++ Q      I+  MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   
Sbjct: 197 SNITPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMER 254

Query: 563 EI 564
           E 
Sbjct: 255 EE 256


>gi|75764154|ref|ZP_00743733.1| 60 kDa inner membrane protein YIDC [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228903521|ref|ZP_04067644.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 4222]
 gi|74488358|gb|EAO51995.1| 60 kDa inner membrane protein YIDC [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228856097|gb|EEN00634.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 4222]
          Length = 260

 Score =  123 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 37/242 (15%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 36  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWPI +Q+P+F A+Y  IS 
Sbjct: 96  ELQKLKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194

Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            +  P ++ Q      I+  MP + +F   + P+GL++YW   N+ ++ Q  V+ K+   
Sbjct: 195 SNITPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMER 252

Query: 563 EI 564
           E 
Sbjct: 253 EE 254


>gi|57901135|gb|AAW57888.1| albino3-like protein [Gonium pectorale]
          Length = 483

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 20/233 (8%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++   +G +I+L T+ VKLL +PL K+Q  S   ++ ++P+ID ++++F     + + K 
Sbjct: 130 HVPYTYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGDDKDK-VSKE 188

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH--APFWGWIKDLAAADPTN 472
              LY+   +NPLAGC P L  IP+F  +Y  ++         A  + WI  LA      
Sbjct: 189 TSALYEAAGVNPLAGCLPTLATIPIFIGLYSSLTNVANAGSLDAEGFYWIPSLAGPTTLA 248

Query: 473 IFTLFGILPFYLPGFMHVGI-----------WPIIMSLSMFIQMKMSPPPADK------G 515
           +        + LP                   P+ +    +    ++ PP D        
Sbjct: 249 MRQSGLGTSWLLPLVDGAPPIGWPEAAAYLSLPVALVAVQYASSALTSPPIDPKDENAGT 308

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
           Q  +L  +P++  +   + P+GL +Y+  + V+S   Q  + K+ GA + + +
Sbjct: 309 QRALLVALPLMIGWFSLNVPSGLSLYYLSNTVLSAATQVYLKKLGGANVKMNE 361


>gi|309390347|gb|ADO78227.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium
           praevalens DSM 2228]
          Length = 216

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 108/221 (48%), Gaps = 15/221 (6%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            F ++   M   + + YN+VGN+G AI++ T+ +K+  +PL  KQ  S   M+ IQP++ 
Sbjct: 1   MFDWLINGMAYALDFIYNIVGNYGSAIIIFTLLIKIALYPLTAKQTRSMREMQEIQPEMK 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +++ K++    +  Q+ M++LY+ H +NP AGC P+++Q+ +   +Y+ I    +   + 
Sbjct: 61  KIQNKYEDDKEK-QQEEMMKLYQEHGVNPAAGCLPMIVQMAILIPLYRTIFALGDKMASE 119

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + WI                      P    V +  +IM     +  K+S    +    
Sbjct: 120 AFLWI------------GTITNGSLAEPDIAIVLLNAVIMLGQTHMTQKLS--GGEGKSN 165

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            ++  MP+  +F     P+G+++YW  S + ++ QQ  + K
Sbjct: 166 KMMYMMPLFIIFIGFRLPSGVLLYWFTSTLFTVAQQYFLSK 206


>gi|257871385|ref|ZP_05651038.1| inner membrane protein [Enterococcus gallinarum EG2]
 gi|257805549|gb|EEV34371.1| inner membrane protein [Enterococcus gallinarum EG2]
          Length = 274

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 29/245 (11%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W  +I       +       GN GI I+L T+ ++++  PL   Q  S    + +QPK+ 
Sbjct: 37  WDRYIVYYFAEAIKMLS--FGNAGIGIILFTLIIRIILMPLMHFQTKSMRKTQELQPKLK 94

Query: 398 ELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
            L++++     +   K      +LY  +N+NP AGC P+L+Q+P+  A+++ IS    + 
Sbjct: 95  ALQQQYASKDSETQNKLRAETQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPAL- 153

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
               + W++ L   DP                     I PI+ +L  F    +S     +
Sbjct: 154 QEGKFLWLQ-LGDRDPYF-------------------ILPILAALFTFASTYLSSMSQIE 193

Query: 515 GQA--MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
             A   I+N+ MP++ +    +  +GL +YW  SN   +VQ  ++           +  R
Sbjct: 194 SNASLKIMNFAMPLMILLMGINIASGLSLYWVVSNAFQVVQTLILNNPFKIRQEREEAAR 253

Query: 572 STFSK 576
               +
Sbjct: 254 KERER 258


>gi|326692346|ref|ZP_08229351.1| preprotein translocase subunit YidC [Leuconostoc argentinum KCTC
           3773]
          Length = 279

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 99/252 (39%), Gaps = 31/252 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W   +A     ++        N+G+ I++ T+ ++ L  PL   Q  S   M+ +QP + 
Sbjct: 43  WGAIVAAFTSAILGSAAWFGNNYGMGIIIFTILIRFLILPLMVYQVHSMMKMQGVQPALK 102

Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
            L+ K+        Q++      LYK   +NP A   P+++Q+PV  A+Y+ I  S  ++
Sbjct: 103 ALQAKYPGKDTESRQLMMAEQQALYKEAGVNPFASLLPLIVQMPVLIALYQAIYTSPVLK 162

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
            +  + W++ L + DP                     + PI+ ++  F    +S      
Sbjct: 163 -SGKFLWLQ-LGSHDPYY-------------------VLPILAAVFTFASSWLSMQST-P 200

Query: 515 GQAMILNWMPVVF-VFALSS---FPAGLIIYWSWSNVISIVQQAVIM--KMHGAEIGLID 568
            Q  +   MP +F V    S    P+ L +YW   NV   +Q   +        E  L+ 
Sbjct: 201 EQNGMTKAMPYIFPVVIFFSAIAVPSALSLYWVVGNVFQTIQTFFLQNPFKIRRERELLK 260

Query: 569 RLRSTFSKNYNS 580
           +      +    
Sbjct: 261 QKERELQRKIKK 272


>gi|312897432|ref|ZP_07756856.1| putative OxaA-like protein [Megasphaera micronuciformis F0359]
 gi|310621493|gb|EFQ05029.1| putative OxaA-like protein [Megasphaera micronuciformis F0359]
          Length = 217

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 32/232 (13%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGI-----AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
              ++  M   + Y Y    + G      AI++ T+ +KL+  PL  KQ  S   M+ +Q
Sbjct: 1   MDVLSGIMSTFLDYCYAFTQSVGYPSYGIAIIMLTIIIKLVLSPLTAKQIRSMEGMQLLQ 60

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           PKI EL++K+K +  + +Q+ M +LY+   +NPL+GC PIL+Q+P   +I+  +      
Sbjct: 61  PKIKELQKKYKGN-QKKMQEEMSKLYREMGVNPLSGCLPILIQMPFLVSIFYALRSYPYD 119

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPA 512
                + W+  L   D T                    I P++ +LS F+  K M+    
Sbjct: 120 PAYESFLWLSSLGQPDETY-------------------ILPVLSALSTFLIQKQMTGAQP 160

Query: 513 DK-----GQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           D       Q  I+   MP+   +   +FP+GL+IYW  SNV    QQ ++ +
Sbjct: 161 DAEGPQAMQQKIMKVAMPLFIGWISLTFPSGLVIYWIISNVFQGAQQMIMGR 212


>gi|15644210|ref|NP_229260.1| inner membrane protein, putative [Thermotoga maritima MSB8]
 gi|38503261|sp|Q9X1H2|OXAA_THEMA RecName: Full=Inner membrane protein oxaA
 gi|4982026|gb|AAD36529.1|AE001797_9 inner membrane protein, putative [Thermotoga maritima MSB8]
          Length = 445

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 73/399 (18%), Positives = 154/399 (38%), Gaps = 32/399 (8%)

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
            + +    +  F ++D  T  ++ +         +        +          +   K+
Sbjct: 61  RKHVFTYGNDGFDVLDEGTPLTVIEEPIVTGVGKVSEGFSDEVSIVYNYGYVKKIFTIKN 120

Query: 229 LVEQKYSDIEK--SSISNFHESNSWLGISDKYWASVFIPSKETSFH-SQFKYLSDGHARY 285
                +    +    +       S    +D+Y  + F      +      K+        
Sbjct: 121 NENYTFFVDIESSKPVDVTVPRVSVDTSTDRYLENYFASFNPKTRTLVLLKHDEGLLFEG 180

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
             K +  +  I+       T    A  +++  +      + IP F       W+  +   
Sbjct: 181 TLKVNGQKRFIVFMGPNKRTLIKKAFPEDYDVLIKAL--VNIPGFNK-----WYDSVFYG 233

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +     +  +L  NFG AIML T+ V+L+ +PL   Q  S  NM+ +QP+I+ +++K+K 
Sbjct: 234 LVWFFWWLKDLTKNFGWAIMLFTLIVRLILYPLYHAQTKSLINMRKLQPQIEAIKKKYKD 293

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-MRHAPFWGWIKD 464
              Q  Q+A+++LY+   +NP +GC  +L+Q+P+F  ++ VI   +E   ++  +   KD
Sbjct: 294 PTKQ--QEALLKLYREAGVNPASGCLMLLIQLPIFMLLWSVIRYYVEEFAYSGSFLIWKD 351

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+A   +N +                    +I  ++ +    ++   A      I   M 
Sbjct: 352 LSAGGFSNNWLFL-----------------VITIVASYYTTLLTSQDARTAWQGI--IMS 392

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           V+F F     P+GL +Y++ + +I +       K +  +
Sbjct: 393 VIFPFLFVGLPSGLFLYYATNTLIQLAVTYYTYKRYKIK 431


>gi|199598237|ref|ZP_03211658.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001]
 gi|258509936|ref|YP_003172687.1| stage III sporulation protein J [Lactobacillus rhamnosus GG]
 gi|199590840|gb|EDY98925.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001]
 gi|257149863|emb|CAR88836.1| Stage III sporulation protein J [Lactobacillus rhamnosus GG]
 gi|259651196|dbj|BAI43358.1| preprotein translocase subunit YidC [Lactobacillus rhamnosus GG]
          Length = 278

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 21/252 (8%)

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           P  E    +   Y +      ++       GN G+ I+  T+ +++L FPL+     S A
Sbjct: 29  PVSENSTGFWDRYVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYLSIKSMA 88

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
             + I P++ EL++K+     +   K      +LY +  +NP+ GC PI++Q+P   A+Y
Sbjct: 89  KQQEIAPQLKELQKKYSSKDTETQTKLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALY 148

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           + I  +  +  +  + W+ +L+  DP  I                  I   + +L   I 
Sbjct: 149 QAILRTSSL-QSGTFLWM-NLSQPDPLWIMQ----------------ILATLFTLGTSIL 190

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
             M+ P  +    +++   P +      + P+ L IYW  +N  S+VQQ +I        
Sbjct: 191 SMMAQPTRNSSSWVMMIISPAMIFVFSVTLPSALAIYWVVTNAFSMVQQLLIQNPFKIRR 250

Query: 565 GLIDRLRSTFSK 576
              ++ R+   K
Sbjct: 251 EREEKARAEKEK 262


>gi|228930050|ref|ZP_04093060.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228936911|ref|ZP_04099661.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229124560|ref|ZP_04253745.1| Membrane protein oxaA 2 [Bacillus cereus 95/8201]
 gi|228658900|gb|EEL14555.1| Membrane protein oxaA 2 [Bacillus cereus 95/8201]
 gi|228822753|gb|EEM68635.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829549|gb|EEM75176.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 262

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 38  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 98  ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 158 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +    ++ Q + +    MP + +F   + P+GL++YW   N+ +++Q  V+ K+   E 
Sbjct: 197 SNSTSGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 256


>gi|148270463|ref|YP_001244923.1| 60 kDa inner membrane insertion protein [Thermotoga petrophila
           RKU-1]
 gi|170289142|ref|YP_001739380.1| 60 kDa inner membrane insertion protein [Thermotoga sp. RQ2]
 gi|147736007|gb|ABQ47347.1| 60 kDa inner membrane insertion protein [Thermotoga petrophila
           RKU-1]
 gi|170176645|gb|ACB09697.1| 60 kDa inner membrane insertion protein [Thermotoga sp. RQ2]
          Length = 443

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 73/399 (18%), Positives = 154/399 (38%), Gaps = 32/399 (8%)

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
            + +    +  F ++D  T  ++ +         +        +          +   K+
Sbjct: 59  RKHVFTYGNDGFDVLDEGTPLTVIEEPIVTGVGKVSEGFSDEVSIVYNYGYVKKIFTIKN 118

Query: 229 LVEQKYSDIEK--SSISNFHESNSWLGISDKYWASVFIPSKETSFH-SQFKYLSDGHARY 285
                +    +    +       S    +D+Y  + F      +      K+        
Sbjct: 119 DENYTFFVDIESSKPVEVTVPRVSVDTSTDRYLENYFASFNPGTRTLVLLKHDEGLLFEG 178

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
             K +  +  I+       T    A  +++  +      + IP F       W+  +   
Sbjct: 179 TLKINGQKRFIVFMGPNKRTLIKKAFPEDYDVLIKAL--VKIPGFNK-----WYDPVFYG 231

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +     +  +L  NFG AI+L T+ V+L+ +PL   Q  S  NM+ +QP+I+ +++K+K 
Sbjct: 232 LVWFFWWLKDLTKNFGWAIVLFTLIVRLILYPLYHAQTKSLINMRKLQPQIEAIKKKYKD 291

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-MRHAPFWGWIKD 464
              Q  Q+A+++LY+   +NP +GC  +L+Q+P+F  ++ VI   +E   ++  +   KD
Sbjct: 292 PTKQ--QEALLKLYREAGVNPASGCLMLLIQLPIFMLLWSVIRYYVEEFAYSGNFLIWKD 349

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L+A   +N +                    II  ++ +    ++   A      I   M 
Sbjct: 350 LSAGGFSNNWLFL-----------------IITIVASYYTTLLTSQDARTAWQGI--IMS 390

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           V+F F     P+GL +Y++ + +I +       K +  +
Sbjct: 391 VIFPFLFVGLPSGLFLYYATNTLIQLAVTYYTYKRYKIK 429


>gi|118480108|ref|YP_897259.1| OxaA-like protein precursor [Bacillus thuringiensis str. Al Hakam]
 gi|229187267|ref|ZP_04314412.1| Membrane protein oxaA 2 [Bacillus cereus BGSC 6E1]
 gi|118419333|gb|ABK87752.1| stage III sporulation protein J [Bacillus thuringiensis str. Al
           Hakam]
 gi|228596277|gb|EEK53952.1| Membrane protein oxaA 2 [Bacillus cereus BGSC 6E1]
          Length = 262

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 129/240 (53%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 38  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 98  ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 158 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +  P ++ Q + +    MP + +F   + P+GL++YW   N+ +++Q  V+ K+   E 
Sbjct: 197 SNSTPVEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 256


>gi|227893841|ref|ZP_04011646.1| stage III sporulation protein J [Lactobacillus ultunensis DSM
           16047]
 gi|227864330|gb|EEJ71751.1| stage III sporulation protein J [Lactobacillus ultunensis DSM
           16047]
          Length = 291

 Score =  122 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 28/258 (10%)

Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378
                    P      +W   + +      ++     +  ++G AI++ T+ V+++  PL
Sbjct: 38  TQGANGHVAPISHTSGNWWDRWIVYYMSAFILWLANLMNNSYGWAIIVFTIIVRVILLPL 97

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILL 435
                 ST  M++IQP+I+ELR+K+     +     Q+   +LYK   +NP  GC P+L+
Sbjct: 98  NAISIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQRETNKLYKEAGVNPYTGCLPVLV 157

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           Q+PV +A+Y  I  + ++     + W+ DL+  DP                     I PI
Sbjct: 158 QLPVMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYF-------------------IMPI 196

Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           +     F+    +P  +  G   I+ + M ++       F + + +YW  SN+   VQ  
Sbjct: 197 LAMAFTFLS---TPASSQNGMTKIMTYGMSIMVGVMALQFQSAITLYWVISNMFQAVQTF 253

Query: 555 VIMKMHGAEIGLIDRLRS 572
           ++      +     +  +
Sbjct: 254 ILQNPIKYKKEQEAKAEA 271


>gi|239616662|ref|YP_002939984.1| 60 kDa inner membrane insertion protein [Kosmotoga olearia TBF
           19.5.1]
 gi|239505493|gb|ACR78980.1| 60 kDa inner membrane insertion protein [Kosmotoga olearia TBF
           19.5.1]
          Length = 445

 Score =  122 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 74/390 (18%), Positives = 142/390 (36%), Gaps = 42/390 (10%)

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
               L  I  +   +    I                 + +   +  ++   + + V   Y
Sbjct: 81  SNGELIPISFSYEEDENGNILVYFFYDSGTKTFVVKNDPYYDFDIILSFSEEITAVSVPY 140

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
                  +               ++ +   P K+ +    +        +     S    
Sbjct: 141 ISEINQKVHP------------NFFITYAKPDKQKTVCISYSEEGRFDVKRFYPNSGRAT 188

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
                  +   +   A  + +  I    ++     F          +I   +   + + Y
Sbjct: 189 ISAFAGPVKLIHISEAFPEIYEEIKKDLEEFGAIGF--------TSYIFHGLVAFLYWLY 240

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
            L  +FG AI+L T+ V+L+ +PL   Q  S   M+ +QP+I+++++K+K    Q  Q+A
Sbjct: 241 KLTKSFGWAIILFTIVVRLVLYPLYHLQTKSMIQMRAVQPEIEKIKKKYKDP--QKQQQA 298

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNI 473
           + +LY+  NINP  GC  +L+Q+PVFF +Y VI    EM  ++P +    DL+       
Sbjct: 299 LTKLYREKNINPATGCLTLLIQLPVFFVLYAVIRYFGEMFAYSPKFLIWSDLST------ 352

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533
                         +   I  I+    M +         D   A       V+F F   S
Sbjct: 353 --------GGFVINLPFIIITILAGFYMSLF-----TSQDPRAARQGMIFNVMFPFLFYS 399

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           FP+GL +Y++ + VI ++    + +  G +
Sbjct: 400 FPSGLFLYYTTNTVIQMLITIYVYRKFGIK 429


>gi|313885423|ref|ZP_07819173.1| stage III sporulation protein J [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619153|gb|EFR30592.1| stage III sporulation protein J [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 277

 Score =  122 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 116/260 (44%), Gaps = 25/260 (9%)

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
             P  +    +   Y +      ++       GN+ I I++ TV ++++  P+ K Q  S
Sbjct: 27  NAPLSQDSTGFWDRYILYYLSQFIIWLSDLFGGNYAIGIIIFTVIIRVILLPVTKMQIES 86

Query: 386 TANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
              M+ IQP++  L+EK+        +++Q    ++ + +++N  AGC P+L+Q+PV  A
Sbjct: 87  QRKMQEIQPELSRLKEKYPNRDAASMEMMQAEQKEIMEKNDVNQFAGCLPLLIQLPVLMA 146

Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           +Y+ I  + E+ +  ++ W   L   DP  I  +               I  ++   + +
Sbjct: 147 LYQTIQRTTEI-NQGYFLW-TSLGQRDPYFILPI---------------IAALLTFATSY 189

Query: 503 IQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           + MK  P      Q  I+ + MP++ +F   S PA L +YW  +N  ++ Q  V+   + 
Sbjct: 190 LSMKAQPEKNSSMQ--IMLFTMPLMILFIGISLPAALSLYWVVTNAFTVAQTLVLN--NP 245

Query: 562 AEIGLIDRLRSTFSKNYNSQ 581
            +I    + +    K    Q
Sbjct: 246 YKIIAERQAKKDAEKEKQRQ 265


>gi|228948751|ref|ZP_04111028.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228810883|gb|EEM57227.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 262

 Score =  122 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 129/240 (53%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   +FGIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 38  IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++K+ +        +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 98  ELQKLKQKYGEVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 158 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +    ++ Q + +    MP + +F   + P+GL++YW   N+ +++Q  V+ K+   E 
Sbjct: 197 SNSTSGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 256


>gi|330718059|ref|ZP_08312659.1| membrane protein OxaA [Leuconostoc fallax KCTC 3537]
          Length = 279

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 29/250 (11%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W  F+A     ++   +    N+G  I++ T+ V+LL  PL      S   M+ +QPK+
Sbjct: 42  IWNAFVAAFTSSILGMAHWFGSNYGWGIVVFTIMVRLLILPLMVFSIGSMMKMQVVQPKL 101

Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             L+ K+        Q++      LYK   +NP A   P+++Q+P+  A+Y+ IS S E+
Sbjct: 102 KALQAKYPGKDTESRQLMMAEQQALYKEAGVNPFASFLPLIVQMPILIALYQAISSSQEL 161

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R +  + W+  L   DP                     I PI+ ++  F    +S    +
Sbjct: 162 R-SGEFLWLA-LGNRDPYF-------------------ILPILAAVFTFASSWLSMQS-N 199

Query: 514 KGQAMILNWMPVVF-VFALSS---FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
             Q+ +  +MP +F V    S    P+ L +YW  SN     Q  V       +     +
Sbjct: 200 PDQSGVTKFMPYIFPVVIFFSALAVPSALSLYWVVSNAFQTAQTLVYQNPFKIKREREIK 259

Query: 570 LRSTFSKNYN 579
           L +       
Sbjct: 260 LAAEKRMQRK 269


>gi|323455292|gb|EGB11161.1| hypothetical protein AURANDRAFT_22501 [Aureococcus anophagefferens]
          Length = 366

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 106/209 (50%), Gaps = 16/209 (7%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            ++GI+I+L T F++ + +PL    Y ST   K ++P +D++++++     Q +  A  +
Sbjct: 66  NSWGISIILFTAFLRTVIYPLNFISYESTERNKALKPYMDKIKDRY-GEDQQAVNLATAK 124

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAPFWGWIKDLAAA--DP---- 470
           LY+    NPLAGC P + QIPVF A+Y+ V++++ + +    + ++ +L     D     
Sbjct: 125 LYEMTETNPLAGCLPAIAQIPVFIALYRSVLNLAFDQKIGEGFFFVPNLEGPTYDNGRGI 184

Query: 471 --TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MILNW 522
                  + G+        +     P+ + ++  I M++  PP D           +L +
Sbjct: 185 QWLTDNWVDGVPSLGWHDTLAFLALPVALVITQSISMRVLTPPPDPNDKSAQNANRVLKY 244

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           +P++  +  ++ P+GL +YW  SNV S+ 
Sbjct: 245 LPLMIGWFSANVPSGLGLYWMTSNVFSVA 273


>gi|269926527|ref|YP_003323150.1| 60 kDa inner membrane insertion protein [Thermobaculum terrenum
           ATCC BAA-798]
 gi|269790187|gb|ACZ42328.1| 60 kDa inner membrane insertion protein [Thermobaculum terrenum
           ATCC BAA-798]
          Length = 342

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 106/226 (46%), Gaps = 29/226 (12%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  + + +   + +F  L G+  +AI+L T+ +KL+  PL+     ++   + I P I +
Sbjct: 6   WNALIQLITDGLLFFQGLTGSTALAIILFTILIKLILLPLSLPSLRNSRKQQQIAPLIKQ 65

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           + +K        +    + LY+ + INP++GC P+L+Q P+F A+++ I       +   
Sbjct: 66  IYKKH-GKDRAAISAETMALYQQYGINPMSGCLPLLIQFPIFLALWRAIIHLSTGSNVGG 124

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--- 515
             WI +LA  D                      + P + +L+ ++Q +M+  P D+    
Sbjct: 125 LLWIDNLARPDH---------------------VLPFLAALAQWLQTRMAMQPKDQIIDP 163

Query: 516 QAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           Q      ++  MP++ +F   +  AG ++YW  S++ S VQQ  + 
Sbjct: 164 QQRSMNSMMQIMPLMVIFIGWNIAAGAVLYWFVSSLFSAVQQYFVT 209


>gi|227518112|ref|ZP_03948161.1| stage III sporulation protein J precursor [Enterococcus faecalis
           TX0104]
 gi|229547133|ref|ZP_04435858.1| stage III sporulation protein J precursor [Enterococcus faecalis
           TX1322]
 gi|229550703|ref|ZP_04439428.1| stage III sporulation protein J precursor [Enterococcus faecalis
           ATCC 29200]
 gi|293382666|ref|ZP_06628594.1| stage III sporulation protein J [Enterococcus faecalis R712]
 gi|293387922|ref|ZP_06632458.1| stage III sporulation protein J [Enterococcus faecalis S613]
 gi|307268912|ref|ZP_07550276.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX4248]
 gi|307274008|ref|ZP_07555218.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0855]
 gi|307276503|ref|ZP_07557623.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX2134]
 gi|307284055|ref|ZP_07564225.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0860]
 gi|307287186|ref|ZP_07567257.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0109]
 gi|307296586|ref|ZP_07576406.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0411]
 gi|312901300|ref|ZP_07760583.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0470]
 gi|312908818|ref|ZP_07767757.1| putative stage III sporulation protein J [Enterococcus faecalis
           DAPTO 512]
 gi|312951724|ref|ZP_07770618.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0102]
 gi|312979540|ref|ZP_07791222.1| putative stage III sporulation protein J [Enterococcus faecalis
           DAPTO 516]
 gi|227074446|gb|EEI12409.1| stage III sporulation protein J precursor [Enterococcus faecalis
           TX0104]
 gi|229304136|gb|EEN70132.1| stage III sporulation protein J precursor [Enterococcus faecalis
           ATCC 29200]
 gi|229307715|gb|EEN73702.1| stage III sporulation protein J precursor [Enterococcus faecalis
           TX1322]
 gi|291079972|gb|EFE17336.1| stage III sporulation protein J [Enterococcus faecalis R712]
 gi|291082659|gb|EFE19622.1| stage III sporulation protein J [Enterococcus faecalis S613]
 gi|306495922|gb|EFM65510.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0411]
 gi|306501784|gb|EFM71075.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0109]
 gi|306503426|gb|EFM72675.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0860]
 gi|306506830|gb|EFM75980.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX2134]
 gi|306509316|gb|EFM78376.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0855]
 gi|306514720|gb|EFM83271.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX4248]
 gi|310625256|gb|EFQ08539.1| putative stage III sporulation protein J [Enterococcus faecalis
           DAPTO 512]
 gi|310630297|gb|EFQ13580.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0102]
 gi|311287722|gb|EFQ66278.1| putative stage III sporulation protein J [Enterococcus faecalis
           DAPTO 516]
 gi|311291677|gb|EFQ70233.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0470]
 gi|315030126|gb|EFT42058.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX4000]
 gi|315033561|gb|EFT45493.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0017]
 gi|315036384|gb|EFT48316.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0027]
 gi|315143599|gb|EFT87615.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX2141]
 gi|315148263|gb|EFT92279.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX4244]
 gi|315151287|gb|EFT95303.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0012]
 gi|315153713|gb|EFT97729.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0031]
 gi|315155127|gb|EFT99143.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0043]
 gi|315158743|gb|EFU02760.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0312]
 gi|315165732|gb|EFU09749.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX1302]
 gi|315168216|gb|EFU12233.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX1341]
 gi|315170517|gb|EFU14534.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX1342]
 gi|315174186|gb|EFU18203.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX1346]
 gi|315573995|gb|EFU86186.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0309B]
 gi|315581946|gb|EFU94137.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0309A]
 gi|329576312|gb|EGG57827.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX1467]
          Length = 266

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 28/251 (11%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W  +I       + +   L G+ GI I+L T+ ++++  PL   Q  S    + +QP++
Sbjct: 26  IWDRYIVYYFAQAIKFLS-LGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQL 84

Query: 397 DELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             L++K+    P+  +   +   +LY  +N+NP  GC P+L+Q+P+  A+Y+ IS   E+
Sbjct: 85  KALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPEL 144

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           +    + W+  L   DP                     I PI+ ++  F    +S     
Sbjct: 145 K-EGTFLWLS-LDKPDPY-------------------LILPILAAVFTFASTYLSSMSQL 183

Query: 514 KGQA--MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
           +  A   I+N+ MP +  F   S  + L +YW  SN     Q  ++           +  
Sbjct: 184 ETNASLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTGQTLLLNNPFKIRKEREEAA 243

Query: 571 RSTFSKNYNSQ 581
           R   ++    +
Sbjct: 244 RQAKARERALE 254


>gi|221195222|ref|ZP_03568278.1| 60 kDa inner membrane insertion protein [Atopobium rimae ATCC
           49626]
 gi|221185125|gb|EEE17516.1| 60 kDa inner membrane insertion protein [Atopobium rimae ATCC
           49626]
          Length = 252

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 13/226 (5%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            + +I   +  ++S      G++G+A+++ TV ++LL  PL  KQ  S A M+ +QPK+ 
Sbjct: 1   MWDWIINLLTSILSGIQGFCGDWGLAVIILTVIIRLLLVPLTNKQTASMARMQVVQPKLK 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           E+++++   P    Q+ M +LY     NPL GC PI LQ+P+FFA++ V        H  
Sbjct: 61  EIQDRYADDPV-RQQEEMRKLYAEIKFNPLGGCLPIFLQMPIFFALFTVARNVP---HDA 116

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADK 514
            +  I    A+ P  +F   G     + G +   ++ I+  +  FI M M+        K
Sbjct: 117 HFYGILSSIASSPAEVFASSG-----ITGVIPYLVFVILFGVLTFIPMMMNANNGASEQK 171

Query: 515 GQAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            Q M++   M +V ++   + PA +++Y+  S++  ++QQ +I   
Sbjct: 172 QQQMLMGGMMSLVMLWFGWTVPAAVLLYYVTSSLWQVIQQKLITNK 217


>gi|227529865|ref|ZP_03959914.1| stage III sporulation protein J precursor [Lactobacillus vaginalis
           ATCC 49540]
 gi|227350234|gb|EEJ40525.1| stage III sporulation protein J precursor [Lactobacillus vaginalis
           ATCC 49540]
          Length = 276

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 105/234 (44%), Gaps = 27/234 (11%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W ++I       + +  N  G +G+ I++ T+ +++L  PL   Q  S    + + PK+ 
Sbjct: 36  WDHYIVYNFSRFIIWLSNNCGGYGMGIIIFTIIIRVLLLPLMFYQTKSMLKTQELAPKLK 95

Query: 398 ELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
            +++K+     +    +Q+   +LYK   +NP A   P+++Q+P+ +A+Y+ I  + E+R
Sbjct: 96  AIQKKYSSRDRESMVKMQEETSKLYKEAGVNPWASMLPMIIQLPIMWALYQAIWRTPELR 155

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
           H   + W++ L   DP                     I PI+ +L  F+   +S     +
Sbjct: 156 H-GTFLWLQ-LGHTDPYY-------------------ILPILAALFTFLSSWLSMASMPE 194

Query: 515 GQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             AM   +  +MP++  F    F + + +YW  SN   +VQ  ++         
Sbjct: 195 RNAMTSAMTWFMPIMVFFMALGFSSAITLYWVVSNAFQVVQTLLLQNPFKIRRE 248


>gi|29377772|ref|NP_816926.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Enterococcus
           faecalis V583]
 gi|227555681|ref|ZP_03985728.1| stage III sporulation protein J precursor [Enterococcus faecalis
           HH22]
 gi|255971546|ref|ZP_05422132.1| preprotein translocase subunit YidC [Enterococcus faecalis T1]
 gi|255974519|ref|ZP_05425105.1| preprotein translocase subunit YidC [Enterococcus faecalis T2]
 gi|256618530|ref|ZP_05475376.1| preprotein translocase subunit YidC [Enterococcus faecalis ATCC
           4200]
 gi|256761851|ref|ZP_05502431.1| preprotein translocase subunit YidC [Enterococcus faecalis T3]
 gi|256854978|ref|ZP_05560339.1| pheromone cCF10 percursor/lipoprotein [Enterococcus faecalis T8]
 gi|256957018|ref|ZP_05561189.1| preprotein translocase subunit YidC [Enterococcus faecalis DS5]
 gi|256960828|ref|ZP_05564999.1| preprotein translocase subunit YidC [Enterococcus faecalis Merz96]
 gi|256963980|ref|ZP_05568151.1| preprotein translocase subunit YidC [Enterococcus faecalis
           HIP11704]
 gi|257078696|ref|ZP_05573057.1| preprotein translocase subunit YidC [Enterococcus faecalis JH1]
 gi|257081344|ref|ZP_05575705.1| preprotein translocase subunit YidC [Enterococcus faecalis E1Sol]
 gi|257084001|ref|ZP_05578362.1| preprotein translocase subunit YidC [Enterococcus faecalis Fly1]
 gi|257417422|ref|ZP_05594416.1| preprotein translocase subunit YidC [Enterococcus faecalis AR01/DG]
 gi|257418845|ref|ZP_05595839.1| preprotein translocase subunit yidC [Enterococcus faecalis T11]
 gi|257421340|ref|ZP_05598330.1| pheromone lipoprotein [Enterococcus faecalis X98]
 gi|294781245|ref|ZP_06746592.1| putative stage III sporulation protein J [Enterococcus faecalis
           PC1.1]
 gi|300861757|ref|ZP_07107837.1| putative stage III sporulation protein J [Enterococcus faecalis
           TUSoD Ef11]
 gi|38502948|sp|Q82YV1|OXAA_ENTFA RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|29345240|gb|AAO82996.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Enterococcus
           faecalis V583]
 gi|227175191|gb|EEI56163.1| stage III sporulation protein J precursor [Enterococcus faecalis
           HH22]
 gi|255962564|gb|EET95040.1| preprotein translocase subunit YidC [Enterococcus faecalis T1]
 gi|255967391|gb|EET98013.1| preprotein translocase subunit YidC [Enterococcus faecalis T2]
 gi|256598057|gb|EEU17233.1| preprotein translocase subunit YidC [Enterococcus faecalis ATCC
           4200]
 gi|256683102|gb|EEU22797.1| preprotein translocase subunit YidC [Enterococcus faecalis T3]
 gi|256709491|gb|EEU24538.1| pheromone cCF10 percursor/lipoprotein [Enterococcus faecalis T8]
 gi|256947514|gb|EEU64146.1| preprotein translocase subunit YidC [Enterococcus faecalis DS5]
 gi|256951324|gb|EEU67956.1| preprotein translocase subunit YidC [Enterococcus faecalis Merz96]
 gi|256954476|gb|EEU71108.1| preprotein translocase subunit YidC [Enterococcus faecalis
           HIP11704]
 gi|256986726|gb|EEU74028.1| preprotein translocase subunit YidC [Enterococcus faecalis JH1]
 gi|256989374|gb|EEU76676.1| preprotein translocase subunit YidC [Enterococcus faecalis E1Sol]
 gi|256992031|gb|EEU79333.1| preprotein translocase subunit YidC [Enterococcus faecalis Fly1]
 gi|257159250|gb|EEU89210.1| preprotein translocase subunit YidC [Enterococcus faecalis ARO1/DG]
 gi|257160673|gb|EEU90633.1| preprotein translocase subunit yidC [Enterococcus faecalis T11]
 gi|257163164|gb|EEU93124.1| pheromone lipoprotein [Enterococcus faecalis X98]
 gi|294451708|gb|EFG20163.1| putative stage III sporulation protein J [Enterococcus faecalis
           PC1.1]
 gi|300848282|gb|EFK76039.1| putative stage III sporulation protein J [Enterococcus faecalis
           TUSoD Ef11]
 gi|323479237|gb|ADX78676.1| inner membrane protein [Enterococcus faecalis 62]
 gi|327536429|gb|AEA95263.1| stage III sporulation protein J [Enterococcus faecalis OG1RF]
          Length = 275

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 28/251 (11%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W  +I       + +   L G+ GI I+L T+ ++++  PL   Q  S    + +QP++
Sbjct: 35  IWDRYIVYYFAQAIKFLS-LGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQL 93

Query: 397 DELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             L++K+    P+  +   +   +LY  +N+NP  GC P+L+Q+P+  A+Y+ IS   E+
Sbjct: 94  KALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPEL 153

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           +    + W+  L   DP                     I PI+ ++  F    +S     
Sbjct: 154 K-EGTFLWLS-LDKPDPY-------------------LILPILAAVFTFASTYLSSMSQL 192

Query: 514 KGQA--MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
           +  A   I+N+ MP +  F   S  + L +YW  SN     Q  ++           +  
Sbjct: 193 ETNASLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTGQTLLLNNPFKIRKEREEAA 252

Query: 571 RSTFSKNYNSQ 581
           R   ++    +
Sbjct: 253 RQAKARERALE 263


>gi|299820845|ref|ZP_07052734.1| stage III sporulation protein J [Listeria grayi DSM 20601]
 gi|299817866|gb|EFI85101.1| stage III sporulation protein J [Listeria grayi DSM 20601]
          Length = 282

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 28/233 (12%)

Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           W ++I  P+  L+ +F  NL G++ I I++ T+ ++L+  PL  KQ  S   M  IQPK+
Sbjct: 37  WSHYIVFPLSWLIRWFSDNLGGSYAIGIIVVTIIIRLIIMPLMIKQIKSQKEMTKIQPKM 96

Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
            EL++K+        Q LQ+  ++LY+ HN+NP+ GC P+L+Q+P+    Y+ IS + E+
Sbjct: 97  KELQQKYASKDNETKQKLQQETMRLYQEHNVNPMMGCLPLLIQMPILIGFYQAISRTAEI 156

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510
           + +  + W+  L   D                      I PI+ +++ F   K+      
Sbjct: 157 K-SDTFLWMT-LGHPDQFF-------------------ILPILAAITTFFSSKIGMMGQV 195

Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             +K  AMI   MPV+ +    S P+ L +YW   N+ + +Q  +I      +
Sbjct: 196 QQNKSMAMITYIMPVMILVMGISLPSALALYWIIGNIFTFLQTLLINNPFKNK 248


>gi|154249719|ref|YP_001410544.1| 60 kDa inner membrane insertion protein [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153655|gb|ABS60887.1| 60 kDa inner membrane insertion protein [Fervidobacterium nodosum
           Rt17-B1]
          Length = 448

 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 147/385 (38%), Gaps = 46/385 (11%)

Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242
             T+      +       +I    P     T+   +  I         + +  D  K ++
Sbjct: 89  TYTINYGEKAEKDSYKSLQITFDYPNRLKKTYIFDDKLITYSYKV---KIESPDSVKIAL 145

Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302
                +++     +  +   F P K+ +   +F    DG                     
Sbjct: 146 PLIWSNDTVRSAMN--FFVSFRPDKDYASIVKFSGKLDGTKVV---------------GN 188

Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW----GWFYFIAKPMFMLMSYFYNLVG 358
           +   F++ G  +   + H   + +    E++        W+ FIA  +    ++      
Sbjct: 189 SLEFFVYMGPYKKTVLKHVFGEDSGRLIELIKTIPGVGTWYSFIADGLTEFFNWINTFTR 248

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           NFG+ I++ T+ V+L+ +P    Q      M+ +QP ++ +++K+K    Q  Q+ +++L
Sbjct: 249 NFGLTIIVFTIIVRLILYPFYHAQTKQMIQMRKLQPAVEAIKKKYKDP--QKQQEELMKL 306

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAAADPTNIFTLF 477
           YK + INP +GC  +L+Q+P+F  +Y VI    E+      +   KDL+A          
Sbjct: 307 YKENKINPSSGCLMLLIQLPIFMLLYGVIQSYQELFSVSGGFLIWKDLSAG--GWGANWL 364

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537
            ++   L  +    I               S       Q +I+     +F F   + P+G
Sbjct: 365 FLIITILTSYYLALIT--------------SQDSRTAWQQIIMG---AIFPFFFINLPSG 407

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGA 562
           + +YW+ +++I +V    I K +  
Sbjct: 408 IFLYWTMNSIIQLVITFYIYKRYKI 432


>gi|89897803|ref|YP_521290.1| hypothetical protein DSY5057 [Desulfitobacterium hafniense Y51]
 gi|219670952|ref|YP_002461387.1| hypothetical protein Dhaf_4959 [Desulfitobacterium hafniense DCB-2]
 gi|89337251|dbj|BAE86846.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219541212|gb|ACL22951.1| 60 kDa inner membrane insertion protein [Desulfitobacterium
           hafniense DCB-2]
          Length = 231

 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 60/244 (24%), Positives = 114/244 (46%), Gaps = 35/244 (14%)

Query: 336 WGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
             +  ++ + +  L +    +   ++G+AI+L T+ +K L +PL  KQ  S      IQP
Sbjct: 2   STFVVWMTELLKWLYNLTDLVGFASYGLAIILLTIIIKTLIYPLTWKQMKSMRKTMEIQP 61

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           K+ E+++K+K +P + L +  ++LYK HN+NP  GC P+L+Q+P+F+A+Y  +       
Sbjct: 62  KLQEIQKKYKNNPEK-LNQETMELYKKHNLNPAGGCLPLLVQLPIFWALYNTLFH----- 115

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------ 508
                         D         +  ++        +  I+   + F+Q K++      
Sbjct: 116 -------------FDNYIADPSQAMFLWFSITENGNLVLAILAGATTFLQTKLTTASNPA 162

Query: 509 ---------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
                    P  A   Q M+L +MP+   +   + P+GL +Y+   N++S++QQ  I + 
Sbjct: 163 MKAQNNTGKPDAAQSTQKMMLYFMPLFMAYITWTVPSGLGLYFFTMNIVSVLQQLYINRK 222

Query: 560 HGAE 563
              E
Sbjct: 223 LNKE 226


>gi|227543716|ref|ZP_03973765.1| stage III sporulation protein J precursor [Lactobacillus reuteri
           CF48-3A]
 gi|300908781|ref|ZP_07126244.1| stage III sporulation protein J [Lactobacillus reuteri SD2112]
 gi|227186284|gb|EEI66355.1| stage III sporulation protein J precursor [Lactobacillus reuteri
           CF48-3A]
 gi|300894188|gb|EFK87546.1| stage III sporulation protein J [Lactobacillus reuteri SD2112]
          Length = 277

 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 107/251 (42%), Gaps = 27/251 (10%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W ++I       + +     G +G+ I++ T+ ++++  PL   Q  +    + + P++
Sbjct: 36  IWDHYIIYNCSQFIIWLSKHFGGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQL 95

Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             +++K+        Q +Q    +LYK   +NP A   P+L+Q+PV +A+Y+ I  +  +
Sbjct: 96  KAIQKKYSSRDRESMQKMQMETQKLYKEAGVNPWASMLPLLVQLPVMWALYQAIWRTSAL 155

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512
           R+   + W++ L   DP                     I PI+ +L  FI   +S     
Sbjct: 156 RN-GTFLWLQ-LGHPDPYY-------------------IMPILAALFTFISSWLSMASMP 194

Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
             +     +  +MP++  F    F + + +YW  +N   +VQ  +I           ++ 
Sbjct: 195 EKNSMTTTMTWFMPIMVFFMALGFSSAITLYWVVTNAFQVVQTLIIQNPFKIRREREEKQ 254

Query: 571 RSTFSKNYNSQ 581
           R+  +K    +
Sbjct: 255 RAEKAKRRKIE 265


>gi|225016764|ref|ZP_03705956.1| hypothetical protein CLOSTMETH_00676 [Clostridium methylpentosum
           DSM 5476]
 gi|224950432|gb|EEG31641.1| hypothetical protein CLOSTMETH_00676 [Clostridium methylpentosum
           DSM 5476]
          Length = 348

 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 66/289 (22%), Positives = 124/289 (42%), Gaps = 51/289 (17%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     P+  ++   Y +V N+G+AI++ T+ +K+   P+A KQ  S+A M   QP+I E
Sbjct: 7   YELFGTPLGYVIWAIYQVVKNYGVAIIIFTIILKVAMLPIAIKQQKSSAKMGAFQPRIAE 66

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---------- 448
           + +K+ ++P Q  Q+ + +LY+    +P+ GC P+L+Q  + F I  V+           
Sbjct: 67  INKKYAKNP-QKKQEELTKLYEEEGYSPMKGCLPMLIQFVILFGIIDVVYKPLTHILHLS 125

Query: 449 -------------ISLEMRHAPFWGWIKDLAAADPTNI---------------FTLFGIL 480
                         +  M        I D    DP+                     G+ 
Sbjct: 126 KDVIAKAAEIIGGNAGAMNQQ---LKIVDAIQQDPSKFSELGQNVIDKVNSLDLNFLGLN 182

Query: 481 PFYLPGFMHVGIW-PIIMSLS----MFIQMKMSPPPADK---GQAMILNWMPVVFVFALS 532
              +P +  + I  PI+  +     MF+ MKM+P           M++  MP+  V+   
Sbjct: 183 LGSVPNWTSILIIIPILAGIFSFLQMFVSMKMNPMGETPGAGSMKMMMFVMPIFSVWITF 242

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           S P G+ IYW  + V+ I Q  ++ K++  +  L ++  +   +   ++
Sbjct: 243 SVPVGVGIYWILTYVVGIGQVLLLNKLYNPK-ELREQAIAEMEERQKAR 290


>gi|269217839|ref|ZP_06161693.1| preprotein translocase, YidC subunit [Actinomyces sp. oral taxon
           848 str. F0332]
 gi|269212774|gb|EEZ79114.1| preprotein translocase, YidC subunit [Actinomyces sp. oral taxon
           848 str. F0332]
          Length = 382

 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 60/274 (21%), Positives = 121/274 (44%), Gaps = 36/274 (13%)

Query: 340 YFIAKPMFMLMSYFYNLV-------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
            ++   +  ++   +            + ++I+  TV V+LL  PL  KQ  S+   + I
Sbjct: 1   MWVIAWIMEILRRVFVAFGLPDGAGAAWVLSIIGLTVVVRLLVLPLYNKQIRSSRQAQVI 60

Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           QP++ ++++K+K          +Q+ M  +Y+ H  +P A C P+L+Q+P+ FA+Y+VIS
Sbjct: 61  QPEVQKIQKKYKGKKDMVSRRRMQEEMQAVYRKHGTSPFATCLPMLVQMPILFALYRVIS 120

Query: 449 ISLEM---RHAPFWGWIKDLAA-ADPTNIFTLFGILPF----YLPGFMHVGIWPIIMSLS 500
               +   R        K+LA   + + +F       F         + +G+  +IMS +
Sbjct: 121 AFPGISSGRREALGPITKELATDFEKSTVFGAPLATNFRTAASTNSQIVIGVLVLIMSAT 180

Query: 501 MFIQM----KMSPP--------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
           MF       + + P        P  + Q +++  MP++++F        +++YW   N+ 
Sbjct: 181 MFYTQHQLMRKNMPESALDKSNPMYRTQQIMMYGMPIMYIFMGGVLQVAVLVYWVAGNIW 240

Query: 549 SIVQQAVIMKMHGAE-----IGLIDRLRSTFSKN 577
           ++ QQA  ++ +             RLR    + 
Sbjct: 241 NLCQQAWFIRNNPTPGSQAYKERQKRLREKRERK 274


>gi|15613732|ref|NP_242035.1| stage III sporulation protein J [Bacillus halodurans C-125]
 gi|38503193|sp|Q9KDP2|OXAA2_BACHD RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|10173785|dbj|BAB04888.1| stage III sporulation protein J [Bacillus halodurans C-125]
          Length = 280

 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 66/270 (24%), Positives = 124/270 (45%), Gaps = 51/270 (18%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
            W +F   PM  L++   NL+  ++G++I++ T+ ++L   PL  KQ  S   M+ I+P+
Sbjct: 36  IWNHFFVYPMSWLITTVANLLNGSYGLSIIIVTILIRLALLPLTLKQQKSMRAMQVIRPE 95

Query: 396 IDELREKFKQSP------PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +++K+K+         Q +QK ++ LY+ H +NP+AGC P+ +Q+P+  A Y  I  
Sbjct: 96  MEAIQKKYKEKGSKDPKVQQEMQKELLGLYQKHGVNPMAGCLPLFIQLPILMAFYFAIMR 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           + E+R+   + W  DL   D                      I P +  ++ + Q KM+ 
Sbjct: 156 TEEIRY-HTFLWF-DLGQPD---------------------YILPFVAGITTYFQFKMTM 192

Query: 510 ------------------PPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISI 550
                                 + Q  ++ + MPV+ + A  S P+ L +YW   N+  I
Sbjct: 193 SHQQQMQKTNPSDSDNPMANMMQMQMKVMLYVMPVMIIIAGLSLPSALSLYWVIGNIFMI 252

Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           +Q   I+    A    +++ +   SK   +
Sbjct: 253 IQTYFIV--VKAPPLEVEQTKQKSSKPNKA 280


>gi|184154473|ref|YP_001842814.1| cell division protein [Lactobacillus reuteri JCM 1112]
 gi|183225817|dbj|BAG26334.1| cell division protein [Lactobacillus reuteri JCM 1112]
          Length = 277

 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 107/251 (42%), Gaps = 27/251 (10%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W ++I       + +     G +G+ I++ T+ ++++  PL   Q  +    + + P++
Sbjct: 36  IWDHYIIYNCSQFIIWLSKHFGGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQL 95

Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             +++K+        Q +Q    +LYK   +NP A   P+L+Q+PV +A+Y+ I  +  +
Sbjct: 96  KAIQKKYSSRDRESMQKMQMETQKLYKEAGVNPWASMLPLLVQLPVMWALYQAIWRTSAL 155

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512
           R+   + W++ L   DP                     I PI+ +L  FI   +S     
Sbjct: 156 RN-GTFLWLQ-LGHPDPYY-------------------IMPILAALFTFISSWLSMASMP 194

Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
             +     +  +MP++  F    F + + +YW  +N   +VQ  +I           ++ 
Sbjct: 195 EKNSMTTTMTWFMPIMVFFMALGFSSAITLYWVVTNAFQVVQTLIIQNPFKIRREREEKQ 254

Query: 571 RSTFSKNYNSQ 581
           R+  +K    +
Sbjct: 255 RAEKAKRRKIE 265


>gi|148545141|ref|YP_001272511.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM
           20016]
 gi|194467400|ref|ZP_03073387.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri
           100-23]
 gi|227364304|ref|ZP_03848397.1| stage III sporulation protein J precursor [Lactobacillus reuteri
           MM2-3]
 gi|325683503|ref|ZP_08163019.1| stage III sporulation protein J [Lactobacillus reuteri MM4-1A]
 gi|148532175|gb|ABQ84174.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM
           20016]
 gi|194454436|gb|EDX43333.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri
           100-23]
 gi|227070617|gb|EEI08947.1| stage III sporulation protein J precursor [Lactobacillus reuteri
           MM2-3]
 gi|324977853|gb|EGC14804.1| stage III sporulation protein J [Lactobacillus reuteri MM4-1A]
          Length = 263

 Score =  121 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 107/251 (42%), Gaps = 27/251 (10%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W ++I       + +     G +G+ I++ T+ ++++  PL   Q  +    + + P++
Sbjct: 22  IWDHYIIYNCSQFIIWLSKHFGGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQL 81

Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             +++K+        Q +Q    +LYK   +NP A   P+L+Q+PV +A+Y+ I  +  +
Sbjct: 82  KAIQKKYSSRDRESMQKMQMETQKLYKEAGVNPWASMLPLLVQLPVMWALYQAIWRTSAL 141

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512
           R+   + W++ L   DP                     I PI+ +L  FI   +S     
Sbjct: 142 RN-GTFLWLQ-LGHPDPYY-------------------IMPILAALFTFISSWLSMASMP 180

Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
             +     +  +MP++  F    F + + +YW  +N   +VQ  +I           ++ 
Sbjct: 181 EKNSMTTTMTWFMPIMVFFMALGFSSAITLYWVVTNAFQVVQTLIIQNPFKIRREREEKQ 240

Query: 571 RSTFSKNYNSQ 581
           R+  +K    +
Sbjct: 241 RAEKAKRRKIE 251


>gi|68160684|gb|AAY86788.1| lr0252 [Lactobacillus reuteri]
          Length = 277

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 108/251 (43%), Gaps = 27/251 (10%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W ++I       + +     G +G+ I++ T+ ++++  PL   Q  +    + + P++
Sbjct: 36  IWDHYIIYNCSQFIIWLSKHFGGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQL 95

Query: 397 DELREKFKQSPPQVLQKAMI---QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             +++K+     + +QK  +   +LYK   +NP A   P+L+Q+PV + +Y+ I  +  +
Sbjct: 96  KAIQKKYSSRDRESMQKMQMETHKLYKEAGVNPWASMLPLLVQLPVMWGLYQAIWRTSAL 155

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512
           R+   + W++ L   DP                     I PI+ +L  FI   +S     
Sbjct: 156 RN-GTFLWLQ-LGHPDPYY-------------------IMPILAALFTFISSWLSMASMP 194

Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
             +     +  +MP++  F    F + + +YW  +N   +VQ  +I           ++ 
Sbjct: 195 EKNSMTTTMTWFMPIMVFFMALGFSSAITLYWVVTNAFQVVQTLIIQNPFKIRREREEKQ 254

Query: 571 RSTFSKNYNSQ 581
           R+  +K    +
Sbjct: 255 RAEKAKRRKIE 265


>gi|65317011|ref|ZP_00389970.1| COG0706: Preprotein translocase subunit YidC [Bacillus anthracis
           str. A2012]
          Length = 262

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 71/240 (29%), Positives = 126/240 (52%), Gaps = 33/240 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            W ++   P+  ++ +  + +   + GIAI++ T+ ++    PLA  QY S A MK +QP
Sbjct: 38  IWDHYFVYPISFMIQFVAHHIPGASXGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97

Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           ++ +L++ +          +  QK M +L K+   NPLAGCWP+L+Q+P+F A+Y  IS 
Sbjct: 98  ELQKLKQXYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           + E+R    + W+ +L  ADP +                   I PII +L+ FIQMK+  
Sbjct: 158 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196

Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +    ++ Q + +    MP + +F   + P+GL++YW   N+ +++Q  V+ K+   E 
Sbjct: 197 SNSTSGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 256


>gi|312903103|ref|ZP_07762284.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0635]
 gi|310633494|gb|EFQ16777.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0635]
 gi|315163327|gb|EFU07344.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0645]
 gi|315578835|gb|EFU91026.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX0630]
          Length = 266

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 28/251 (11%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W  +I       + +   L G+ GI I+L T+ ++++  PL   Q  S    + +QP++
Sbjct: 26  IWDRYIVYYFAQAIKFLS-LGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQL 84

Query: 397 DELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             L++K+    P+  +   +   +LY  +N+NP  GC P+L+Q+P+  A+Y+ IS   E+
Sbjct: 85  KALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPEL 144

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           +    + W+  L   DP                     I PI+ ++  F    +S     
Sbjct: 145 K-EGTFLWLS-LDKPDPY-------------------LILPILAAVFTFASTYLSSMSQL 183

Query: 514 KGQA--MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
           +  A   I+N+ MP +  F   S  + L +YW  SN    VQ  ++           +  
Sbjct: 184 ETNASLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTVQTLLLNNPFKIRKEREEAA 243

Query: 571 RSTFSKNYNSQ 581
           R   ++    +
Sbjct: 244 RQAKARERALE 254


>gi|163791581|ref|ZP_02185983.1| Membrane protein chaperone oxaA [Carnobacterium sp. AT7]
 gi|159873159|gb|EDP67261.1| Membrane protein chaperone oxaA [Carnobacterium sp. AT7]
          Length = 275

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 27/260 (10%)

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           P  +        Y I     +++       G++G+ I++ T+ ++L+  P+   Q  ST 
Sbjct: 27  PITDQSTGIWDKYIIFNFSRIIVWLSNLFGGSYGVGIIIFTLIIRLILLPVMHGQTKSTR 86

Query: 388 NMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
            M  +QP++ EL+ K+          L++   +LY    +NP+AGC P+L+Q+PV  A+Y
Sbjct: 87  KMAELQPQLKELQTKYASKDTDTQNKLKEETSKLYSEAGVNPVAGCLPLLIQMPVLIAMY 146

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           + IS + E+     + W+ +L A DP                     I P+I ++  +  
Sbjct: 147 QAISRT-EVLKTGNFLWM-NLGAPDPLF-------------------ILPVIAAILTYAT 185

Query: 505 MK---MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            K   MS   ++     ++  MP + +F   + P+ L +YW   N  S+ Q  ++     
Sbjct: 186 TKLSTMSQAESNPTTTTMMYMMPALILFMGITLPSALSLYWVVGNAFSVGQTMLLNNPFK 245

Query: 562 AEIGLIDRLRSTFSKNYNSQ 581
                 +++++   +    +
Sbjct: 246 IIKEREEKIQAERDRKRALE 265


>gi|224001688|ref|XP_002290516.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973938|gb|EED92268.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 446

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 17/266 (6%)

Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375
             +     D                 + K +   +         +GI+I+  TV +K L 
Sbjct: 96  EAVTASSADPNAQNGWFGFLTLPIEGLLKLIHGGLDSMGMSSNAWGISIIAMTVVIKALT 155

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435
           FPL K Q  ST  M+ +QP I  L+ K++ +P  +  + + ++Y+T+ +NPLAGC P L+
Sbjct: 156 FPLTKSQLESTNKMQALQPTIKSLQAKYQSNPEVM-NQKIAEVYQTNEVNPLAGCIPSLV 214

Query: 436 QIPVFFAIYK-VISISLEMRHAPFWGWIKDLAAA----------DPTNIFTLFGILPFYL 484
           QIPVF  +Y+ V++++ E      + ++ +L             D      + G+     
Sbjct: 215 QIPVFIGLYRAVLNLAKENALDEPFLFLPNLEGPTYGADPAHGSDWLFKNWVDGVPGLGW 274

Query: 485 PGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAM---ILNWMPVVFVFALSSFPAGLII 540
              +     P+ +++S  I M M  P   D  Q     IL  +P +  +   + PA L +
Sbjct: 275 EDTIAFLSIPVFLTISQVISMNMMQPKTDDPQQQQANVILKVLPFMIGWFALNVPAALGV 334

Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGL 566
           YW  +N+++      +      +  +
Sbjct: 335 YWVVNNIVTTATTLYVRNSMP-KPDV 359


>gi|81429494|ref|YP_396495.1| membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei
           23K]
 gi|78611137|emb|CAI56190.1| Membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei
           23K]
          Length = 277

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 29/243 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y I      L+       G++G AI+  T+ ++L+  PL   Q  +    + + P+I  L
Sbjct: 41  YIIYNFSRFLLWLADIFGGSYGWAIVAFTIIIRLIILPLTWWQSKTMMKQQEVAPEIQAL 100

Query: 400 REKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           ++K+        Q L++   +LY    +NP+ GC P+L+Q+PV  A+Y+ I  +  ++  
Sbjct: 101 QKKYASKDVETQQKLREETQKLYAEAGVNPVIGCLPLLVQMPVLIALYQAIYRTSALKSG 160

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ---MKMSPPPAD 513
             + W++ L  ADP                     I  I+ ++  F       MS P  +
Sbjct: 161 S-FLWMQ-LGKADPYF-------------------IMAILAAVFTFATSYLTMMSQPTKN 199

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
                +L  MP++      +  + + IYW  +N  S+ Q  VI   +  +I      +  
Sbjct: 200 ATTTAMLWVMPIMIFVMAMNIASAVSIYWVVTNAFSVGQTMVIQ--NPFKIRREREAKEQ 257

Query: 574 FSK 576
             +
Sbjct: 258 VKR 260


>gi|295398138|ref|ZP_06808187.1| stage III sporulation protein J [Aerococcus viridans ATCC 11563]
 gi|294973657|gb|EFG49435.1| stage III sporulation protein J [Aerococcus viridans ATCC 11563]
          Length = 277

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 57/244 (23%), Positives = 116/244 (47%), Gaps = 27/244 (11%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W  +I      ++ +  ++ GN+G+ I+  T+ ++++  PL K Q  ST  M+ +QP++ 
Sbjct: 38  WDRYIVYNFSRIIVWLSDIFGNYGVGIIAFTLIIRIILIPLTKYQTQSTEKMQMMQPELK 97

Query: 398 ELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
            L+EK+    P   Q LQ+   +L + ++ +  +GC P+L+Q+P+  A+Y+ IS + E+ 
Sbjct: 98  ALQEKYASKDPETQQKLQEETAKLNEKYDYSMWSGCLPMLIQLPILMALYQSISRT-EIL 156

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPP 511
               + W++ L   D                      + PII ++  +   +++    P 
Sbjct: 157 SQGHFLWLE-LGVPDQLF-------------------VIPIIAAILTWYNTRLTTIGTPN 196

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
           ++   AM+   MPV+ +F   + P+ + +YW  S   +I+Q  V+           D++R
Sbjct: 197 SNPSMAMMQWTMPVMILFMGVTLPSAISLYWVASTGFTILQTLVMNNPFKKRDAREDQIR 256

Query: 572 STFS 575
               
Sbjct: 257 KEKE 260


>gi|225181149|ref|ZP_03734595.1| 60 kDa inner membrane insertion protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225168118|gb|EEG76923.1| 60 kDa inner membrane insertion protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 220

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 70/221 (31%), Positives = 123/221 (55%), Gaps = 9/221 (4%)

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           I   +  ++ +F N+ GN+GIAI+L T+ ++L+ +PL  KQ  S   M+ +QP++ +L+E
Sbjct: 4   IVDFLNEILMFFNNVTGNYGIAIILLTLLIRLVTWPLQNKQLTSAKAMQELQPELKKLQE 63

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           K+K    + L +A ++L+K H +NP A C P+L+Q+PV +A+++V+   + +    F G 
Sbjct: 64  KYKNDKEK-LNQATMELWKEHKVNPAASCLPLLIQMPVLWAMFQVLRDQVTIADTMFLGM 122

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
              ++  D   +  LF          +   +  II  ++ F+Q KM     DK Q  ++ 
Sbjct: 123 DMTVSVMDLRELGLLFAATS------IGYYLLVIISGVTTFLQQKMMMS--DKSQQAMMI 174

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            MP++ +F    FPAGL++YW  +N +SI Q  +I K    
Sbjct: 175 MMPLMLLFFSLQFPAGLVLYWVVNNSLSIGQHFLINKNVKK 215


>gi|257088483|ref|ZP_05582844.1| preprotein translocase yidC [Enterococcus faecalis CH188]
 gi|256997295|gb|EEU83815.1| preprotein translocase yidC [Enterococcus faecalis CH188]
          Length = 275

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 28/251 (11%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W  +I       + +   L G+ GI I+L T+ ++++  PL   Q  S    + +QP++
Sbjct: 35  IWDRYIVYYFAQAIKFLS-LGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQL 93

Query: 397 DELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             L++K+    P+  +   +   +LY  +N+NP  GC P+L+Q+P+  A+Y+ IS   E+
Sbjct: 94  KALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPEL 153

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           +    + W+  L   DP                     I PI+ ++  F    +S     
Sbjct: 154 K-EGTFLWLS-LDKPDPY-------------------LILPILAAVFTFASTYLSSMSQL 192

Query: 514 KGQA--MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
           +  A   I+N+ MP +  F   S  + L +YW  SN    VQ  ++           +  
Sbjct: 193 ETNASLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTVQTLLLNNPFKIRKEREEAA 252

Query: 571 RSTFSKNYNSQ 581
           R   ++    +
Sbjct: 253 RQAKARERALE 263


>gi|191639866|ref|YP_001989032.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23]
 gi|239630800|ref|ZP_04673831.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301067927|ref|YP_003789950.1| preprotein translocase subunit YidC [Lactobacillus casei str.
           Zhang]
 gi|190714168|emb|CAQ68174.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23]
 gi|239527083|gb|EEQ66084.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300440334|gb|ADK20100.1| Preprotein translocase subunit YidC [Lactobacillus casei str.
           Zhang]
 gi|327383980|gb|AEA55456.1| Membrane protein oxaA 1 [Lactobacillus casei LC2W]
 gi|327387164|gb|AEA58638.1| Membrane protein oxaA 1 [Lactobacillus casei BD-II]
          Length = 278

 Score =  120 bits (300), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 102/240 (42%), Gaps = 21/240 (8%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +      ++       GN G+ I+  T+ +++L FPL+     S +  + I P++ EL
Sbjct: 41  YVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYMSIKSMSKQQEIAPQLKEL 100

Query: 400 REKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           ++K+     +   +      +LY +  +NP+ GC PI++Q+P   A+Y+ I  +  +   
Sbjct: 101 QKKYSSKDTETQTRLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSL-QT 159

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
             + W+ +L+  DP  I  +   L       +           SM  Q     P  +   
Sbjct: 160 GTFLWM-NLSQPDPLWIMQILATLFTLGTSVL-----------SMMAQ-----PTRNSSS 202

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
            +++   PV+      + P+ L IYW  +N  S++QQ +I            + ++   K
Sbjct: 203 WLMMIVSPVMIFVFSITLPSALAIYWVVTNAFSMIQQLLIQNPFKIRREREAKAQAEKEK 262


>gi|222100006|ref|YP_002534574.1| Inner membrane protein oxaA [Thermotoga neapolitana DSM 4359]
 gi|221572396|gb|ACM23208.1| Inner membrane protein oxaA [Thermotoga neapolitana DSM 4359]
          Length = 445

 Score =  120 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 66/311 (21%), Positives = 136/311 (43%), Gaps = 32/311 (10%)

Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313
             + Y+AS    + ++      K+          + +  +   +       T    A  +
Sbjct: 152 YMENYFASF---NSKSRTLVLVKHDEGLRFEGTLEVNGQKRLTVFMGPNKRTLIKKAFPE 208

Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373
           ++ ++        IP F       W+  +   +     +  +L  +FG AI+L T+ V+L
Sbjct: 209 DYESLMKAL--GNIPGFNR-----WYDTVFYGLVWFFWWLKDLTKSFGWAIVLFTLIVRL 261

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433
           + +PL   Q  S  NM+ +QP+I+ +++K+K    Q  Q+A+++LYK   +NP +GC  +
Sbjct: 262 ILYPLYHAQTKSLINMRKLQPQIEAIKKKYKDPAKQ--QEALLKLYKEAGVNPASGCLML 319

Query: 434 LLQIPVFFAIYKVISISLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           L+Q+P+F  ++ VI   +E   ++  +   KDL+A                  GF +  I
Sbjct: 320 LIQLPIFILLWSVIRYYVEEFAYSGGFLIWKDLSA-----------------GGFANNWI 362

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           + +I  +S +    ++    D   A     M ++F F     P+GL +Y++ + +I +  
Sbjct: 363 FLVITIVSSYYTTLLT--SQDVRTAWQGLIMSIIFPFLFVGLPSGLFLYYTTNTLIQLAV 420

Query: 553 QAVIMKMHGAE 563
                + +  +
Sbjct: 421 TYYTYRRYKIK 431


>gi|257875890|ref|ZP_05655543.1| inner membrane protein [Enterococcus casseliflavus EC20]
 gi|257810056|gb|EEV38876.1| inner membrane protein [Enterococcus casseliflavus EC20]
          Length = 274

 Score =  120 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 27/226 (11%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQK 413
            GN GI I+L T+ ++++  PL   Q  S    + +QPK+  L++++     +    L++
Sbjct: 54  FGNAGIGIILFTLIIRVILMPLMHFQTKSMRKTQELQPKLKALQQQYASKDTETQSKLKE 113

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
              +LY  +N+NP AGC P+L+Q+P+  A+++ IS    +     + W++ L   DP   
Sbjct: 114 ETQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPAL-QEGKFLWLQ-LGDRDPYF- 170

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--MILNW-MPVVFVFA 530
                             I PI+ +L  F    +S     +  A   I+N+ MP++ +  
Sbjct: 171 ------------------ILPILAALFTFASTYLSSMSQVESNASLKIMNFAMPMMILLM 212

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
             +  +GL +YW  SN   +VQ  ++           +  R    +
Sbjct: 213 GINIASGLSLYWVVSNAFQVVQTMILNNPFKIRQEREEAARKERER 258


>gi|257866272|ref|ZP_05645925.1| inner membrane protein [Enterococcus casseliflavus EC30]
 gi|257873212|ref|ZP_05652865.1| inner membrane protein [Enterococcus casseliflavus EC10]
 gi|257800230|gb|EEV29258.1| inner membrane protein [Enterococcus casseliflavus EC30]
 gi|257807376|gb|EEV36198.1| inner membrane protein [Enterococcus casseliflavus EC10]
          Length = 274

 Score =  120 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 27/226 (11%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQK 413
            GN GI I+L T+ ++++  PL   Q  S    + +QPK+  L++++     +    L++
Sbjct: 54  FGNAGIGIILFTLIIRVILMPLMHFQTKSMRKTQELQPKLKALQQQYASKDTETQSKLKE 113

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
              +LY  +N+NP AGC P+L+Q+P+  A+++ IS    +     + W++ L   DP   
Sbjct: 114 ETQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPAL-QEGKFLWLQ-LGDRDPYF- 170

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--MILNW-MPVVFVFA 530
                             I PI+ +L  F    +S     +  A   I+N+ MP++ +  
Sbjct: 171 ------------------ILPILAALFTFASTYLSSMSQVESNASLKIMNFAMPMMILLM 212

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
             +  +GL +YW  SN   +VQ  ++           +  R    +
Sbjct: 213 GINIASGLSLYWVVSNAFQVVQTMILNNPFKIRQEREEAARKERER 258


>gi|227533510|ref|ZP_03963559.1| stage III sporulation protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227188839|gb|EEI68906.1| stage III sporulation protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 264

 Score =  120 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 21/240 (8%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +      ++       GN G+ I+  T+ +++L FPL+     S +  + I P++ EL
Sbjct: 27  YVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYMSIKSMSKQQEIAPQLKEL 86

Query: 400 REKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           ++K+          L+    +LY +  +NP+ GC PI++Q+P   A+Y+ I  +  +   
Sbjct: 87  QKKYSSKDTESQTRLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSL-QT 145

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
             + W+ +L+  DP  I  +   L       +           SM  Q     P  +   
Sbjct: 146 GTFLWM-NLSQPDPLWIMQILATLFTLGTSVL-----------SMMAQ-----PTRNSSS 188

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
            +++   PV+      + P+ L IYW  +N  S++QQ +I            + ++   K
Sbjct: 189 WLMMIVSPVMIFVFSITLPSALAIYWVVTNAFSMIQQLLIQNPFKIRREREAKAQAEKEK 248


>gi|116496323|ref|YP_808057.1| preprotein translocase subunit YidC [Lactobacillus casei ATCC 334]
 gi|116106473|gb|ABJ71615.1| Preprotein translocase subunit YidC [Lactobacillus casei ATCC 334]
          Length = 278

 Score =  120 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 21/240 (8%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +      ++       GN G+ I+  T+ +++L FPL+     S +  + I P++ EL
Sbjct: 41  YVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYMSIKSMSKQQEIAPQLKEL 100

Query: 400 REKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           + K+     +   +      +LY +  +NP+ GC PI++Q+P   A+Y+ I  +  +   
Sbjct: 101 QRKYSSKDTETQTRLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSL-QT 159

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
             + W+ +L+  DP  I  +   L       +           SM  Q     P  +   
Sbjct: 160 GTFLWM-NLSQPDPLWIMQILATLFTLGTSVL-----------SMMAQ-----PTRNSSS 202

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
            +++   PV+      + P+ L IYW  +N  S++QQ +I            + ++   K
Sbjct: 203 WLMMIVSPVMIFVFSITLPSALAIYWVVTNAFSMIQQLLIQNPFKIRREREAKAQAEKEK 262


>gi|299541768|ref|ZP_07052091.1| membrane protein oxaA 1 precursor [Lysinibacillus fusiformis ZC1]
 gi|298725506|gb|EFI66147.1| membrane protein oxaA 1 precursor [Lysinibacillus fusiformis ZC1]
          Length = 256

 Score =  120 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 23/224 (10%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W  FI  P+   + YF +L+G +   I+  T+ ++L   PL  KQ  S+  M+ IQPK+ 
Sbjct: 36  WNEFIVWPLVSAIKYFADLLGTYAWGIIAVTIIIRLAILPLMIKQTKSSKKMQEIQPKLK 95

Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           EL++K+        Q  Q+ M++L     +NPLAGC P+++Q+P+    Y  IS      
Sbjct: 96  ELQKKYASKDAQTQQQYQQEMMKLMSESGVNPLAGCLPVIIQMPILIGFYHAISR----- 150

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
                  +   +  D  N F      P             I   L  FI ++  P   + 
Sbjct: 151 -------MNATSTFDLGNFFIFPLADP--------APALAITAGLMQFIVLRTGPAMDNP 195

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              +++  MP + +    + PA L +YW   N+ISI Q   I K
Sbjct: 196 QMKIMMYIMPFMIIGFGMALPAALSLYWVIGNIISIFQNLYIYK 239


>gi|325567645|ref|ZP_08144312.1| stage III sporulation protein J [Enterococcus casseliflavus ATCC
           12755]
 gi|325159078|gb|EGC71224.1| stage III sporulation protein J [Enterococcus casseliflavus ATCC
           12755]
          Length = 274

 Score =  120 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 27/226 (11%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQK 413
            GN GI I+L T+ ++++  PL   Q  S    + +QPK+  L++++     +    L++
Sbjct: 54  FGNAGIGIILFTLIIRVILMPLMHFQTKSMRKTQELQPKLKALQQQYASKDTETQSKLKE 113

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
              +LY  +N+NP AGC P+L+Q+P+  A+++ IS    +     + W++ L   DP   
Sbjct: 114 ETQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPAL-QEGKFLWLQ-LGDRDPYF- 170

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--MILNW-MPVVFVFA 530
                             I PI+ +L  F    +S     +  A   I+N+ MP++ +  
Sbjct: 171 ------------------ILPILAALFTFASTYLSSMSQVESNASLKIMNFAMPMMILLM 212

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
             +  +GL +YW  SN   ++Q  ++           +  R    +
Sbjct: 213 GINIASGLSLYWVVSNAFQVLQTMILNNPFKIRQEREEAARKERER 258


>gi|220933190|ref|YP_002510098.1| 60 kDa inner membrane insertion protein [Halothermothrix orenii H
           168]
 gi|219994500|gb|ACL71103.1| 60 kDa inner membrane insertion protein [Halothermothrix orenii H
           168]
          Length = 217

 Score =  120 bits (299), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 117/221 (52%), Gaps = 17/221 (7%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
             ++ + M   +    N V N+G+AI++ T+F+KLL +PL  KQ  S   M+++QP++ +
Sbjct: 1   MGWLTEIMTDTLILLNNWVHNYGLAIIILTIFIKLLLYPLTAKQTKSMKAMQDLQPEMKK 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           ++EK+K +  +  Q+ M++LY+ HN+NP AGC+P++LQ+ + + +++ IS          
Sbjct: 61  IQEKYKDNKEK-QQEEMMKLYQEHNVNPAAGCFPMILQLFIIWPLFRAISG--------- 110

Query: 459 WGWIKDLAAADPTNIFTLFGIL--PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
              +KD+ A +      +  +       P    + I  I M    ++  K +    +   
Sbjct: 111 ---LKDIMAPEEATFLWIGNLTEGSLATPDITLIIINVIAMIGQTYLTQKWT--GNNSQN 165

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             I+  MP + ++     PAG+++YW    V++++QQ +I 
Sbjct: 166 NAIMWVMPFIILWFGFKLPAGVLLYWLTQTVLTVIQQYIIY 206


>gi|315026681|gb|EFT38613.1| putative stage III sporulation protein J [Enterococcus faecalis
           TX2137]
          Length = 266

 Score =  120 bits (299), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 28/251 (11%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W  +I       + +   L G+ GI I+L T+ ++++  PL   Q  S    + +QP++
Sbjct: 26  IWDRYIVYYFAQAIKFLS-LGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQL 84

Query: 397 DELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             L++K+    P+  +   +   +LY  +N+NP  GC P+L+Q+P+  A+Y+ IS   E+
Sbjct: 85  KALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPEL 144

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           +    + W+  L   DP                     I PI+ ++  F    +S     
Sbjct: 145 K-EGTFMWLS-LDKPDPY-------------------LILPILAAVFTFASTYLSSMSQL 183

Query: 514 KGQA--MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
           +  A   I+N+ MP +  F   S  + L +YW  SN     Q  ++           +  
Sbjct: 184 ETNASLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTGQTLLLNNPFKIRKEREEAA 243

Query: 571 RSTFSKNYNSQ 581
           R   ++    +
Sbjct: 244 RQAKARERALE 254


>gi|116334864|ref|YP_796391.1| preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367]
 gi|116100211|gb|ABJ65360.1| Preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367]
          Length = 277

 Score =  120 bits (299), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 107/256 (41%), Gaps = 29/256 (11%)

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
             P             +      ++   +   G++G+ I+  T+ ++++  PL   Q  S
Sbjct: 25  NKPITNQSTGIWDGLIVLNFSRAIIWLAHLFGGSYGVGIIAFTIIIRVILMPLMIFQTRS 84

Query: 386 TANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
               + +QP++  L++K+        Q LQ    +LY    INP+ GC P L+Q+P+ +A
Sbjct: 85  MRKTQEVQPQLKALQKKYSSKDRETMQKLQAEQQKLYSEAGINPMMGCLPALVQLPIIWA 144

Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           +Y+ I  +  +R +  + W++ L   DP                     I PI+ +L+ F
Sbjct: 145 LYQAIWRTAVLR-SGTFLWLQ-LGHKDPYF-------------------ILPILAALATF 183

Query: 503 IQMKMSP---PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +   ++    P  +    M++  MPVV  F   +  + L +YW+ S V  + Q  +I   
Sbjct: 184 LSSWLTTKSAPETNSMNTMMIVGMPVVVFFTAMNVASSLSLYWTVSYVFQVGQTLLIQ-- 241

Query: 560 HGAEIGLIDRLRSTFS 575
           +  +I      +    
Sbjct: 242 NPWKIQAERDAKEKEK 257


>gi|169830199|ref|YP_001700357.1| membrane protein oxaA 1 [Lysinibacillus sphaericus C3-41]
 gi|168994687|gb|ACA42227.1| Membrane protein oxaA 1 precursor [Lysinibacillus sphaericus C3-41]
          Length = 256

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 23/224 (10%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W  FI  P+   + YF +L+G +   I+  T+ ++L   PL  KQ  S+  M+ IQPK+ 
Sbjct: 36  WNEFIVWPLVSAIKYFADLLGTYAWGIIAVTIIIRLAILPLMIKQTKSSKKMQEIQPKLK 95

Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           EL++K+        Q  Q+ M++L     +NPLAGC P+++Q+P+    Y  IS      
Sbjct: 96  ELQKKYASKDAQTQQQYQQEMMKLMSESGVNPLAGCLPVIIQMPILIGFYHAISR----- 150

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
                  +   +  D  N F      P             I   L  FI ++  P   + 
Sbjct: 151 -------MNATSTFDLGNFFIFPLADP--------APALAITAGLMQFIVLRTGPAMDNP 195

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              +++  MP + +    + PA L +YW   N+ISI Q   I K
Sbjct: 196 QMKIMMYIMPFMIIAFGMALPAALSLYWVIGNIISIFQNLYIYK 239


>gi|126651992|ref|ZP_01724184.1| OxaA-like protein precursor [Bacillus sp. B14905]
 gi|126591261|gb|EAZ85370.1| OxaA-like protein precursor [Bacillus sp. B14905]
          Length = 256

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 23/224 (10%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W  FI  P+   + YF  L+G +   I+  T+ ++L   PL  KQ  S+  M+ IQPK+ 
Sbjct: 36  WNEFIVWPLVSAIKYFAELLGTYAWGIIAVTIIIRLAILPLMIKQTKSSKKMQEIQPKLK 95

Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           EL++K+        Q  Q+ M++L     +NPLAGC P+++Q+P+    Y  IS      
Sbjct: 96  ELQKKYASKDAQTQQQYQQEMMKLMSESGVNPLAGCLPVIIQMPILIGFYHAISR----- 150

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
                  +   +  D  N F      P             I   L  FI ++  P   + 
Sbjct: 151 -------MNATSTFDLGNFFIFPLADP--------APALAITAGLMQFIVLRTGPAMDNP 195

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              +++  MP + +    + PA L +YW   N+ISI Q   I K
Sbjct: 196 QMKIMMYIMPFMIIAFGMALPAALSLYWVIGNIISIFQNLYIYK 239


>gi|257087831|ref|ZP_05582192.1| preprotein translocase subunit YidC [Enterococcus faecalis D6]
 gi|256995861|gb|EEU83163.1| preprotein translocase subunit YidC [Enterococcus faecalis D6]
          Length = 275

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 28/251 (11%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W  +I       + +   L G+ GI I+L T+ ++++  PL   Q  S    + +QP++
Sbjct: 35  IWDRYIVYYFAQAIKFLS-LGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQL 93

Query: 397 DELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             L++K+    P+  +   +   +LY  +N+NP  GC P+L+Q+P+  A+Y+ IS   E+
Sbjct: 94  KALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPEL 153

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           +    + W+  L   DP                     I PI+ ++  F    +S     
Sbjct: 154 K-EGTFMWLS-LDKPDPY-------------------LILPILAAVFTFASTYLSSMSQL 192

Query: 514 KGQA--MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
           +  A   I+N+ MP +  F   S  + L +YW  SN     Q  ++           +  
Sbjct: 193 ETNASLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTGQTLLLNNPFKIRKEREEAA 252

Query: 571 RSTFSKNYNSQ 581
           R   ++    +
Sbjct: 253 RQAKARERALE 263


>gi|303274404|ref|XP_003056523.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545]
 gi|226462607|gb|EEH59899.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545]
          Length = 511

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 114/237 (48%), Gaps = 18/237 (7%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
              G +I+ TT  VK L +P  K Q  S  NM+N+QP+++ +REK++    Q+    + +
Sbjct: 145 YPLGSSIIFTTFVVKALTYPFTKVQVESALNMQNLQPQVNAVREKYRDDQEQMNI-EINR 203

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTL 476
           LY+ + ++PLAGC P+LL +PV + +Y+  +  S++      W +I  LA   P      
Sbjct: 204 LYEDNQVSPLAGCGPLLLTLPVVWGLYRAFNNASIDGSFDEPWFFIPSLAGPTPDRSLAW 263

Query: 477 FGIL------PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---------KGQAMILN 521
              L      P          + PI+   S ++ M +  P  D         + Q+ +LN
Sbjct: 264 LLPLDDNYQPPLGWHDASLYLVVPILTVASQYVSMSILSPVKDLNDPNTAETEQQSFLLN 323

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           ++P+   +   + PAGL +YW ++N+ +   Q  + +  G  +  +++++    K  
Sbjct: 324 FLPLFIGYISLTVPAGLTLYWLFNNIFTTATQVYL-RQGGGAVAKVEKIKDVKLKVP 379


>gi|312144701|ref|YP_003996147.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium sp.
           'sapolanicus']
 gi|311905352|gb|ADQ15793.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium sp.
           'sapolanicus']
          Length = 216

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 110/221 (49%), Gaps = 15/221 (6%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            F ++   M   + + Y +VGN+G+AI++ T+ +K++ +PL  KQ  S   M+ IQP++ 
Sbjct: 1   MFDWLINGMTYALDFIYGIVGNYGLAIVIFTLIIKIVLYPLTAKQTRSMREMQEIQPEMK 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +++ K++    +  Q+ M++LYK H +NP AGC+P+++Q+ +   +Y+ I    +     
Sbjct: 61  KIQNKYEDDKEK-QQEEMMKLYKDHGVNPAAGCFPMIVQMAILIPLYRTIFTLGDQMANE 119

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + WI  +                   P    V +  + M     I  ++S     +   
Sbjct: 120 AFLWIGTITQ------------GSLAEPDIAIVLLNAVAMLAQTHITQQIS--GGGEKSN 165

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            ++  MP+  VF     PAG+++YW  S + ++ QQ V+ K
Sbjct: 166 KMMYMMPLFIVFIGFRLPAGVLVYWFVSTLFTVGQQYVLSK 206


>gi|304318135|ref|YP_003853280.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779637|gb|ADL70196.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 218

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 23/217 (10%)

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           I   +  L+ + Y+ VGN+G+AI++ T+ ++++  P   +Q  +   MK I P +++L++
Sbjct: 4   IGMYLGQLLKFIYDFVGNYGVAIIIFTILIRIVLLPFYVQQMGTMKKMKEINPLVEDLKK 63

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           K+ +  PQ L + M++LYK  N+NP++GC P+LL + + + ++ ++        A  + W
Sbjct: 64  KYAK-DPQKLNEEMMKLYKEKNVNPMSGCLPMLLPLVILWPLFAMLRNYPAFSTAS-FLW 121

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
           +K LA  DP                     I PI+  ++ +I   M     D  Q  +  
Sbjct: 122 LKSLAEKDPYF-------------------ILPILSGVTTYISSAM--IQTDNSQKSMNL 160

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            M    ++   S PAG+ IYW  SN+  I QQ   ++
Sbjct: 161 IMSAFMIWITVSLPAGIGIYWVTSNIFQIAQQYFFLR 197


>gi|159897293|ref|YP_001543540.1| 60 kDa inner membrane insertion protein [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159890332|gb|ABX03412.1| 60 kDa inner membrane insertion protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 311

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
             F+       + + ++L GN G AI+  T+ V+L   PL  KQ  S   +  IQPK+ E
Sbjct: 1   MNFLGPIFLPFLEWLFHLFGNLGWAIIAFTILVRLGMLPLTLKQLRSQRKIMVIQPKLRE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMR 454
           L+ K+ +   + L +  ++LY+ H  NP+ GC P+L+ +P+ F +++ I           
Sbjct: 61  LQRKYSKDREK-LTQETMKLYREHGANPVGGCLPLLISLPILFGVWQAIQLFGTSVPATA 119

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-PAD 513
               + W+  L          L               I PI+     FI   M+     D
Sbjct: 120 EQVQFLWLPRLT--------PLIENNVTVNSAHDPYFILPILAIALQFITTLMAMQRNPD 171

Query: 514 KGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
             QA    ++ +MP +F F    FPAG  +Y    ++I +VQQ  
Sbjct: 172 PQQASMNKVMMFMPFIFGFIYFQFPAGATLYSVTGSLIQLVQQYF 216


>gi|28379981|ref|NP_786873.1| cell division protein [Lactobacillus plantarum WCFS1]
 gi|300769104|ref|ZP_07078993.1| stage III sporulation protein J [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308182185|ref|YP_003926313.1| cell division protein [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|38502978|sp|Q88RX1|OXAA1_LACPL RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|28272822|emb|CAD65751.1| cell division protein [Lactobacillus plantarum WCFS1]
 gi|300493344|gb|EFK28523.1| stage III sporulation protein J [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308047676|gb|ADO00220.1| cell division protein [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 277

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 108/266 (40%), Gaps = 33/266 (12%)

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
             P  +    +     I      ++        ++G+ I++ T+ ++++  PL   Q  +
Sbjct: 25  NTPITDKSTGFWDGLIILNFSRAIIWLSNLFGHSYGLGIIVFTLIIRIIILPLMIFQTRN 84

Query: 386 TANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
              M+ +QP++  L++K+        Q LQ  M +LY  H ++P+A   P+L+Q+P+  A
Sbjct: 85  MVAMQEVQPQMKALQKKYSSRDMETQQKLQAEMKKLYAKHGVHPMASMLPLLVQLPILIA 144

Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           +Y+ I  +  ++    + W++ L + DP                     + PI+ ++  F
Sbjct: 145 LYQAIWRTQALKTGS-FLWLQ-LGSKDPYY-------------------VLPILAAIFTF 183

Query: 503 IQMKM---SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV---- 555
               +   S P  +     +   MPV+ +    + P+ L +YW  SN   + Q  +    
Sbjct: 184 ASSWLAMKSQPEQNGMTTSMTYLMPVIILITAINVPSALSLYWVISNAFQVGQTLLLQNP 243

Query: 556 --IMKMHGAEIGLIDRLRSTFSKNYN 579
             I +   A+       + T  K   
Sbjct: 244 FKINREREAKKQAERDRKRTLEKARK 269


>gi|157363658|ref|YP_001470425.1| 60 kDa inner membrane insertion protein [Thermotoga lettingae TMO]
 gi|157314262|gb|ABV33361.1| 60 kDa inner membrane insertion protein [Thermotoga lettingae TMO]
          Length = 443

 Score =  119 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 22/229 (9%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
             W+  +  P+     + + +  NFG AI++ TV V+ + +PL   Q  S   M+ +QP+
Sbjct: 222 SSWYDPVFYPLVWFFWWLFEMTRNFGWAIIIFTVIVRFVLYPLYHAQTKSMIKMRKVQPR 281

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-MR 454
           I+ +R+K+K    Q  Q+ ++++Y+   INP  GC  +L+Q+PVFF +Y VI    E   
Sbjct: 282 IEAIRKKYKDPTKQ--QEELMKVYREEGINPAGGCLMLLIQLPVFFLLYAVIRYFQEEFA 339

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
               +    DL+                   GF    I+ I   ++ +    ++   +  
Sbjct: 340 FGSKFLLWNDLSV-----------------GGFGPNAIFIIATVVASYFNTLITSQDSRS 382

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
               IL  M ++F F   S P+GL +Y++ + VI +V    I K +  +
Sbjct: 383 AWQGIL--MSLIFPFLFVSLPSGLFLYYTVNTVIQLVITYYIYKRYKIK 429


>gi|219120081|ref|XP_002180787.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407503|gb|EEC47439.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 467

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 22/229 (9%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            ++G++I + T  V+ L  PL+ +Q  S   +K+++P + +++ K+K +  +   +A  +
Sbjct: 138 QSWGVSIAIFTTIVRTLLVPLSIEQSKSAEYIKSLKPYVADIKAKYKNN-QEAQNRATAK 196

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAPFWGWIKDLAAA-------- 468
           LY+    NPLAGC+  L+Q+PVF  +Y+ V  ++++      + WI  L           
Sbjct: 197 LYEDAQQNPLAGCFVALIQLPVFLGLYRGVRLLAMDGVLEEPFLWIPSLEGPVAPPNFQG 256

Query: 469 -DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----------Q 516
            D      + G         +   I P+I+ +   + M++  PP D+             
Sbjct: 257 LDWLVQGWVNGAPALGWETTLAFLIMPVILVVLQSVTMQVLQPPVDEDATKEERETLERS 316

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             IL ++P++  F     PAGL IYW  SN+ ++ Q   +     A   
Sbjct: 317 QTILKFLPLLIGFFALQVPAGLTIYWFTSNIFTLTQSLAVRAYFSANPP 365


>gi|254558115|ref|YP_003064532.1| cell division protein [Lactobacillus plantarum JDM1]
 gi|254047042|gb|ACT63835.1| cell division protein [Lactobacillus plantarum JDM1]
          Length = 277

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 108/266 (40%), Gaps = 33/266 (12%)

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
             P  +    +     I      ++        ++G+ I++ T+ ++++  PL   Q  +
Sbjct: 25  NTPITDKSTGFWDSLIILNFSRAIIWLSNLFGHSYGLGIIVFTLIIRIIILPLMIFQTRN 84

Query: 386 TANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
              M+ +QP++  L++K+        Q LQ  M +LY  H ++P+A   P+L+Q+P+  A
Sbjct: 85  MVAMQEVQPQMKALQKKYSSRDMETQQKLQAEMKKLYAKHGVHPMASMLPLLVQLPILIA 144

Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           +Y+ I  +  ++    + W++ L + DP                     + PI+ ++  F
Sbjct: 145 LYQAIWRTQALKTGS-FLWLQ-LGSKDPYY-------------------VLPILAAIFTF 183

Query: 503 IQMKM---SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV---- 555
               +   S P  +     +   MPV+ +    + P+ L +YW  SN   + Q  +    
Sbjct: 184 ASSWLAMKSQPEQNGMTTSMTYLMPVIILITAINVPSALSLYWVISNAFQVGQTLLLQNP 243

Query: 556 --IMKMHGAEIGLIDRLRSTFSKNYN 579
             I +   A+       + T  K   
Sbjct: 244 FKINREREAKKQAERDRKRTLEKARK 269


>gi|170018056|ref|YP_001728975.1| preprotein translocase subunit YidC [Leuconostoc citreum KM20]
 gi|169804913|gb|ACA83531.1| Preprotein translocase subunit YidC [Leuconostoc citreum KM20]
          Length = 279

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 103/251 (41%), Gaps = 31/251 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W   +A     ++        N+G+ I++ T+ ++ L  PL   Q  S   M+ +QP + 
Sbjct: 43  WSAIVAAFTSSILGTSAWFGNNYGLGIIVFTILIRFLILPLMVYQIQSMMKMQVVQPALK 102

Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
            L+ K+        Q++      LYK   +NP A   P+++Q+PV FA+Y+ I  S  ++
Sbjct: 103 ALQAKYPGKDTESRQLMMAEQQALYKKEGVNPFASMLPLIVQMPVLFALYQSIYNSPVLK 162

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
            +  + W++ L + DP                     + P++ ++  F    +S      
Sbjct: 163 -SGKFLWLQ-LGSHDPYY-------------------VLPVLAAVFTFASSWLSMQST-P 200

Query: 515 GQAMILNWMPVVF-VFALSS---FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
            Q  +   MP +F V    S    P+ L +YW   N+   +Q   +   +  +I     L
Sbjct: 201 EQNGMTKAMPYIFPVVIFFSAMAVPSALSLYWVVGNLFQTIQTFFLQ--NPFKIRREREL 258

Query: 571 RSTFSKNYNSQ 581
            +   ++   +
Sbjct: 259 AAQKERDMKRK 269


>gi|307128506|ref|YP_003880536.1| inner membrane protein YidC [Candidatus Sulcia muelleri CARI]
 gi|306482968|gb|ADM89838.1| inner membrane protein YidC [Candidatus Sulcia muelleri CARI]
          Length = 520

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 71/476 (14%), Positives = 162/476 (34%), Gaps = 34/476 (7%)

Query: 71  VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130
           V ++N  L  SI+  G    +L L+ Y    +++  +  +    +  + +  E       
Sbjct: 55  VIIENNVLKLSISTIGGNIKNLFLKRYKNYHNNDENLYLI---KDNSSLFGLEFTNKYCK 111

Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190
                               T     KL    +   ++      + +  F I     ++ 
Sbjct: 112 KLNTYEVEFIPKIKEDEFKYTINMHAKLDNNVSIYYVYVIYKKNNYNIDFSIRTKGFSDF 171

Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250
           +       +  +   K Q   N +      I       L ++     +K ++    ++  
Sbjct: 172 LSTNLEWNQKLLRLEKDQKIENNYNKIFYSI-----NKLKKKINFLNQKKNLHKKAKNIY 226

Query: 251 WLGISDKYWASVFIPSK-----ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305
           W+    +++ S+ +        ++     F    + H+  +      +I     K    +
Sbjct: 227 WIANKQQFFVSILLFKTPLKIYKSKKIIFFLKNENVHSINKISNLKIKIINKNNKEFNLS 286

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           N  +    ++  +                     Y        L S       N+G+ I+
Sbjct: 287 NKWYFCPLDYNLLKK--NKYGFENLIQFGGGVVKYINRYVFLYLFSILEKTNFNYGLIII 344

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
           L T+ VKL+  P+   QY   + ++           +         +   ++L K   IN
Sbjct: 345 LMTIIVKLIILPITYNQYKLNSIIEIF---------RTSFDDINQNKFKNLKLDKKIVIN 395

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
                   ++QIP+F++++ +    + +R    + WI +L   D  +IF L   +P Y  
Sbjct: 396 ---SILYAIIQIPIFYSLFNLFPTLINLRGKS-FLWIDNLTYYD--SIFNLKFNIPIYGN 449

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541
              H+ +  I+ S+S+ I  K++          I   M ++ +  ++++ +GL +Y
Sbjct: 450 ---HISLLTILYSISLLILRKINNSKYKTNNNSI-YIMSIIILLFINNYSSGLYLY 501


>gi|256370584|ref|YP_003108409.1| putative inner membrane protein translocase component YidC
           [Candidatus Sulcia muelleri SMDSEM]
 gi|256009376|gb|ACU52736.1| putative inner membrane protein translocase component YidC
           [Candidatus Sulcia muelleri SMDSEM]
          Length = 571

 Score =  118 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 78/493 (15%), Positives = 176/493 (35%), Gaps = 35/493 (7%)

Query: 75  NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE 134
           N  L  S++  G    +L L+              L           +      T    +
Sbjct: 91  NNVLKLSLSTIGGNIKNLFLKKNPNISIETENFSLL-------KENSSLFGLEFTNKFGK 143

Query: 135 LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQI 194
              +  +  +   K       I +  +   N+  +    + +   + I   + +  + + 
Sbjct: 144 KIETYKLEFIPEIKEDLFKYTINMHAQLEPNVSIDYVYVVYKGNNYYIDFFIKSKGLSEY 203

Query: 195 RFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251
                      +         T   +   I+   +    +  + D +K S     ++  W
Sbjct: 204 VSKNSLNFEWSQKILNLEKEKTIEKKYTNISFRINSKKNKINFFDKKKYSFKE-LDNLYW 262

Query: 252 LGISDKYWASVF-----IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTN 306
           +    +++AS+      +    +     +    +  +  +         +   + +    
Sbjct: 263 IANKQQFFASILCFKNQLTIDNSKKILIYSENINSDSELKFSELKIPFLLKKEEELNCDY 322

Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL---VGNFGIA 363
             + G  ++  +   +       FE +I +G         +  ++ F        N GI 
Sbjct: 323 KWYFGPLDYHILKQSKD-----GFEQIIPFGKGIAKVLNRYFFLNLFELFEKANINSGII 377

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L T+ VKLL  P+   QY     M+N   +   ++ KF  +P     + +I+ YK   
Sbjct: 378 IILMTIVVKLLLSPITYSQYKFNFFMQNFFMQNFLMQTKFFLNP-----QILIEFYKKIG 432

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           INP+      ++QIP+F+++       + +R    + W K+L+ +D   I  L   +P Y
Sbjct: 433 INPIYSLLGNMIQIPIFYSLMNFFPTLINLRGK-RFLWAKNLSYSD--RILNLNFNIPIY 489

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
                   I+ I++   +F+  K+           I     ++ +F  +++P+G+ IY+ 
Sbjct: 490 GNHISLFNIFNILI---LFVFTKIRNRKKFSKTNRIYILFYIMMLFFFNNYPSGIYIYYI 546

Query: 544 WSNVISIVQQAVI 556
            SN+I+I+  ++I
Sbjct: 547 SSNIINILFYSLI 559


>gi|320333667|ref|YP_004170378.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus
           maricopensis DSM 21211]
 gi|319754956|gb|ADV66713.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus
           maricopensis DSM 21211]
          Length = 493

 Score =  118 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 25/238 (10%)

Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
           +           L     F  I+  +   M + Y+++ N+G+ I++ TV ++   +PL +
Sbjct: 255 HLYQEGYTTLPDLFRPNIFGQISLLIVKFMEWLYSVLHNWGLVILVLTVVLRAAIWPLMQ 314

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
            Q  +TA M+ +QPK+ E++EK+K   PQ +Q   +++Y+ +N+NP  GC    +  P+ 
Sbjct: 315 TQGKTTARMQLLQPKLKEVQEKYKD-DPQKMQAETMRMYREYNVNPA-GCLSSFIPFPIL 372

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            A++  I    E       GW+ DL+  DP  I     +    L  ++     P      
Sbjct: 373 IALWSTIRN-FEF--DSGLGWLPDLSIPDPLYILAALYVAVNLLQLYVSTRKSP-----E 424

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           MF Q                 ++ ++F +   +FPAG+ +YW  S VI  +QQ  I +
Sbjct: 425 MFRQQS---------------FIYLIFAYFALTFPAGVTLYWIISTVIGTIQQVFINR 467


>gi|296875720|ref|ZP_06899785.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis
           ATCC 15912]
 gi|296433290|gb|EFH19072.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis
           ATCC 15912]
          Length = 279

 Score =  118 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 34/236 (14%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---P 408
            F +  GN G+ I++ T+ ++ +  PL + Q  ST  M+ IQP + EL+ K+        
Sbjct: 54  RFLSFGGNIGVGIIVFTIVIRTVLLPLFQYQMNSTRKMQEIQPLLKELQAKYPGKDLDSR 113

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L + M  LYK   +   +   P+L+Q+PV  A+++ +S  +E      + W+ DL A 
Sbjct: 114 TKLSEEMRALYKEKGVKTSSAFLPLLIQMPVLMALFQALSR-VEFLKVGHFLWL-DLGAI 171

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPV 525
           DPT                    I P++ +L  F    ++    P  +     ++  MPV
Sbjct: 172 DPTY-------------------ILPVLAALFTFFSSWLTNKAMPERNGSATTMMYVMPV 212

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +  F      +G+ +YW  SN   + Q  ++             +    +K   S+
Sbjct: 213 MIFFFALFSASGVALYWVTSNAYQVGQTYLLN-------NPFKIIAEREAKEQASR 261


>gi|238855503|ref|ZP_04645808.1| membrane protein OxaA 1 [Lactobacillus jensenii 269-3]
 gi|260665207|ref|ZP_05866056.1| stage III sporulation protein J [Lactobacillus jensenii SJ-7A-US]
 gi|282931529|ref|ZP_06337028.1| stage III sporulation protein J [Lactobacillus jensenii 208-1]
 gi|313472762|ref|ZP_07813250.1| stage III sporulation protein J [Lactobacillus jensenii 1153]
 gi|238831869|gb|EEQ24201.1| membrane protein OxaA 1 [Lactobacillus jensenii 269-3]
 gi|260560944|gb|EEX26919.1| stage III sporulation protein J [Lactobacillus jensenii SJ-7A-US]
 gi|281304336|gb|EFA96439.1| stage III sporulation protein J [Lactobacillus jensenii 208-1]
 gi|313448863|gb|EEQ68258.2| stage III sporulation protein J [Lactobacillus jensenii 1153]
          Length = 285

 Score =  118 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 64/283 (22%), Positives = 114/283 (40%), Gaps = 40/283 (14%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +                 W  +         L+     L  N+G  I++ T+ V+LL F
Sbjct: 25  VLTGCANSTGHVSHTSGSWWDRYVIF-YFSQFLLWLADLLGKNYGWTIIVFTILVRLLLF 83

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPI 433
           PL      ST   + +QP+ID+LR K+  +     Q+L     +LYK   INP  GC+P+
Sbjct: 84  PLNAISIKSTTKQQQLQPEIDKLRAKYPGNDAESRQLLNAETQKLYKEAGINPYLGCFPM 143

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           LLQ+P  FA+Y+ I  + ++     + W+ +L+ ADP                     + 
Sbjct: 144 LLQLPFMFALYQAIYSTKQL-QDGTFLWM-NLSKADPYY-------------------VM 182

Query: 494 PIIMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
           PI+ ++  F+     QM      +      ++   P++      SFP  + +YW  S++ 
Sbjct: 183 PILAAVFTFMSSYVAQMSAPESSSQSMTKAMMWITPLIVAVPAISFPTAITLYWVVSSIF 242

Query: 549 SIVQQAVIMK----------MHGAEIGLIDRLRSTFSKNYNSQ 581
           S++Q  ++               AE     ++R  + K    +
Sbjct: 243 SVIQTFILQNPFKYAREQEAKKQAEKERQRKIRRAYKKINRKK 285


>gi|9743337|gb|AAF97961.1|AC000103_11 F21J9.16 [Arabidopsis thaliana]
          Length = 519

 Score =  118 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 109/268 (40%), Gaps = 20/268 (7%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
            +   + Y  A  +  ++               + +  V ++   +   Q  S   MK++
Sbjct: 117 TVHVPYSYGFAIILLTVLVKAATFPLTKKQVFTMISFLVHVIELVVYSLQVESAMAMKSL 176

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SL 451
            P+I  ++E++     ++      +LYK   INPLAGC P L  IPV+  +Y+ +S  + 
Sbjct: 177 TPQIKAIQERYAGDQEKIQL-ETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 235

Query: 452 EMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPIIMSLS 500
           E      + WI  LA           + I  LF    G  P   P  +   + P+++  S
Sbjct: 236 EGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFIEGHPPLGWPDTLAYLVLPLLLVFS 295

Query: 501 MF--IQMKMSPPPADKGQ---AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
            +  IQ+  S    D        +   +P++  +   S P+GL +YW  +N++S  QQ  
Sbjct: 296 QYLSIQIMQSSQSNDPAMKSSQAVTKLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVW 355

Query: 556 IMKMHGAE--IGLIDRLRSTFSKNYNSQ 581
           + K  GA+  +     L +   K    +
Sbjct: 356 LQKYGGAKNPVEKFTNLVTKEDKTQQIE 383


>gi|271970552|ref|YP_003344748.1| Preprotein translocase subunit YidC-like protein [Streptosporangium
           roseum DSM 43021]
 gi|270513727|gb|ACZ92005.1| Preprotein translocase subunit YidC-like protein [Streptosporangium
           roseum DSM 43021]
          Length = 316

 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 25/227 (11%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           + + I+  TV ++LL FPL  KQ  S+  M+ + PK+ ELR+++K    Q + + ++ LY
Sbjct: 36  WALTIITLTVLMRLLIFPLFLKQMRSSKKMQELAPKVQELRKRYKNDK-QRMNQEVMALY 94

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL----------AAAD 469
           +    NPL GC PI+ Q P+F +++ V+           +G  + L           A  
Sbjct: 95  QGQGANPLGGCLPIVAQFPIFISMFTVLQAMAN--GQLKFGMTQHLVDSARAAHIFGAPL 152

Query: 470 PTNIFTLFGILPFYLP----GFMHVGIWPIIMSLSMFIQ--------MKMSPPPADKGQA 517
           P   +T    +           + + I+  I SL+ F+         M   P      Q 
Sbjct: 153 PATFWTSSADIIKLGADPVVTKVVLAIFVAISSLTTFLTVRQSVTRSMAQMPDNPMAQQQ 212

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            IL ++  +F     +FP GLI+YW  +N+ ++ QQ      + + +
Sbjct: 213 KILMYISPLFAIFSLNFPLGLILYWVTTNLWTLGQQHWFYSRNPSPV 259


>gi|282934245|ref|ZP_06339522.1| stage III sporulation protein J [Lactobacillus jensenii 208-1]
 gi|281301719|gb|EFA93986.1| stage III sporulation protein J [Lactobacillus jensenii 208-1]
          Length = 285

 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 65/283 (22%), Positives = 115/283 (40%), Gaps = 40/283 (14%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +     +           W  +         L+     L  N+G  I++ T+ V+LL F
Sbjct: 25  VLTGCANNTGNVSHTSGSWWDRYVI-YYFSQFLLWLADLLGKNYGWTIIVFTILVRLLLF 83

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPI 433
           PL      ST   + +QP+ID+LR K+  +     Q+L     +LYK   INP  GC+P+
Sbjct: 84  PLNAISIKSTTKQQQLQPEIDKLRAKYPGNDAESRQLLNAETQKLYKEAGINPYLGCFPM 143

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           LLQ+P  FA+Y+ I  + ++     + W+ +L+ ADP                     + 
Sbjct: 144 LLQLPFMFALYQAIYSTKQL-QDGTFLWM-NLSKADPYY-------------------VM 182

Query: 494 PIIMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
           PI+ ++  F+     QM      +      ++   P++      SFP  + +YW  S++ 
Sbjct: 183 PILAAVFTFMSSYVAQMSAPESSSQSMTKAMMWITPLIVAVPAISFPTAITLYWVVSSIF 242

Query: 549 SIVQQAVIMK----------MHGAEIGLIDRLRSTFSKNYNSQ 581
           S+VQ  ++               AE     ++R  + K    +
Sbjct: 243 SVVQTFILQNPFKYAREQEAKKQAEKERQRKIRRAYKKLNRKK 285


>gi|326202768|ref|ZP_08192635.1| membrane protein insertase, YidC/Oxa1 family [Clostridium
           papyrosolvens DSM 2782]
 gi|325986845|gb|EGD47674.1| membrane protein insertase, YidC/Oxa1 family [Clostridium
           papyrosolvens DSM 2782]
          Length = 280

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 63/277 (22%), Positives = 120/277 (43%), Gaps = 50/277 (18%)

Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
            F  I +P+   + + YN +   N+G+A+++ T+ ++    PL  KQY S+A M+ +QP 
Sbjct: 1   MFDVIIRPLGQFLYWIYNTIAFHNYGLALVIFTIIIRAAMIPLTLKQYKSSAEMQKVQPL 60

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL---- 451
           + E++ K+     + L + M++LY+ H INP  GC P+L+Q+P+  ++++ I+  L    
Sbjct: 61  LQEIQRKYANDKAK-LNEEMMKLYQEHKINPAGGCLPLLIQMPILLSLWQAITKPLKYML 119

Query: 452 --------EMRHAPFWGWIKDLAAADPTNIFTLFGILP---------------------- 481
                    +  A         +  +    F   G                         
Sbjct: 120 GFTPEQLKNLAEASNIPINSAYSEINTITHFMSIGQGSKVGNLNMFFPSHGFGINLGDIP 179

Query: 482 -------FYLPGFMHVGIWPIIMSLSMFIQMKMSPP------PADKGQAMILNWMPVVFV 528
                     P +  + + PII +++ ++ ++MS P       A+     ++   P++ +
Sbjct: 180 TWHFNKIMSEPKYAVLLLLPIIATITTYLSVRMSMPKATSDKAANPMGNSMMYVSPIMTL 239

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
                FPAGL +YW   NV +IVQQ  + K    +  
Sbjct: 240 LFSFQFPAGLALYWITGNVFAIVQQYYVNKYVLKKKE 276


>gi|256851671|ref|ZP_05557059.1| stage III sporulation protein J [Lactobacillus jensenii 27-2-CHN]
 gi|260661612|ref|ZP_05862524.1| stage III sporulation protein J [Lactobacillus jensenii 115-3-CHN]
 gi|297205280|ref|ZP_06922676.1| stage III sporulation protein J [Lactobacillus jensenii JV-V16]
 gi|256615629|gb|EEU20818.1| stage III sporulation protein J [Lactobacillus jensenii 27-2-CHN]
 gi|260547669|gb|EEX23647.1| stage III sporulation protein J [Lactobacillus jensenii 115-3-CHN]
 gi|297149858|gb|EFH30155.1| stage III sporulation protein J [Lactobacillus jensenii JV-V16]
          Length = 290

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 65/283 (22%), Positives = 115/283 (40%), Gaps = 40/283 (14%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +     +           W  +         L+     L  N+G  I++ T+ V+LL F
Sbjct: 30  VLTGCANNTGNVSHTSGSWWDRYVI-YYFSQFLLWLADLLGKNYGWTIIVFTILVRLLLF 88

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPI 433
           PL      ST   + +QP+ID+LR K+  +     Q+L     +LYK   INP  GC+P+
Sbjct: 89  PLNAISIKSTTKQQQLQPEIDKLRAKYPGNDAESRQLLNAETQKLYKEAGINPYLGCFPM 148

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           LLQ+P  FA+Y+ I  + ++     + W+ +L+ ADP                     + 
Sbjct: 149 LLQLPFMFALYQAIYSTKQL-QDGTFLWM-NLSKADPYY-------------------VM 187

Query: 494 PIIMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
           PI+ ++  F+     QM      +      ++   P++      SFP  + +YW  S++ 
Sbjct: 188 PILAAVFTFMSSYVAQMSAPESSSQSMTKAMMWITPLIVAVPAISFPTAITLYWVVSSIF 247

Query: 549 SIVQQAVIMK----------MHGAEIGLIDRLRSTFSKNYNSQ 581
           S+VQ  ++               AE     ++R  + K    +
Sbjct: 248 SVVQTFILQNPFKYAREQEAKKQAEKERQRKIRRAYKKLNRKK 290


>gi|227891666|ref|ZP_04009471.1| stage III sporulation protein J precursor [Lactobacillus salivarius
           ATCC 11741]
 gi|227866469|gb|EEJ73890.1| stage III sporulation protein J precursor [Lactobacillus salivarius
           ATCC 11741]
          Length = 263

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 30/228 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           W ++I       +    ++ GN +G  I++ T+ V+++  PL   Q  S      +QPK+
Sbjct: 22  WDHYIVWNFIRAIQGLSHIFGNSYGWGIVIFTIIVRIIILPLMIYQMKSMRQTMELQPKL 81

Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             L+EK+        Q+L K   +LY    INP A   P+++Q+P+ FA+Y+ I  S  +
Sbjct: 82  KALQEKYPGKDMESRQMLAKEQQKLYSEAGINPFASMLPLIVQMPILFALYQAIFRSDVL 141

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           + +  + W++ L   DP                     I PI+ ++  ++  K++   A 
Sbjct: 142 K-SGTFFWMQ-LGDKDPYY-------------------ILPILAAVFTWLTSKLN-SMAQ 179

Query: 514 KGQAMI---LNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             Q  I   + W MP++      + PA L +YW  +N+ S  Q  +I 
Sbjct: 180 PEQNTITTVMTWSMPIMIFVFALNVPAALSLYWVITNLFSAGQTLLIN 227


>gi|322373859|ref|ZP_08048394.1| membrane protein [Streptococcus sp. C150]
 gi|321277231|gb|EFX54301.1| membrane protein [Streptococcus sp. C150]
          Length = 305

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 105/259 (40%), Gaps = 39/259 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM----KN 391
           W W         ++  +  NL   FG+ I+  T+ V+L+  PL   Q    A      + 
Sbjct: 36  WVWNLLGRPMSHIITYFANNLGLGFGLGIVFVTIIVRLIILPLGLHQSRGAAYQAAKREY 95

Query: 392 IQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           + P ++ + E+ + +  Q  +      ++Q  + + ++ +   GC P+L+Q+P F A+Y 
Sbjct: 96  LAPILEPINERLRNAETQEEKMAAQSELMQAQRENGVSLMGGVGCLPLLIQLPFFSALYY 155

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  + H   + W  +L + D                         II++   + Q 
Sbjct: 156 AARYTPGVLH-DHFLWF-NLNSRD---------------------FPLIIIIAALYYFQS 192

Query: 506 KMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            +S     + Q   +      MP++ +    S PA +I+YW    + SI+QQ +    + 
Sbjct: 193 WLSIQQVPEEQRKQMAVTMYSMPIMMIVFGISSPAAVILYWFVGGIFSIIQQLITN--YI 250

Query: 562 AEIGLIDRLRSTFSKNYNS 580
            +  L +++   F+KN   
Sbjct: 251 IKPRLQEKVAEEFAKNPPK 269


>gi|282858213|ref|ZP_06267403.1| preprotein translocase subunit YidC [Pyramidobacter piscolens
           W5455]
 gi|282583944|gb|EFB89322.1| preprotein translocase subunit YidC [Pyramidobacter piscolens
           W5455]
          Length = 308

 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 107/248 (43%), Gaps = 22/248 (8%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            +  ++  +F  +++ Y++ GN+G AI+  TV V+L   PL  KQ  S   M+ +QP++ 
Sbjct: 1   MWKALSDYLFQFLNFLYSMTGNWGWAIVALTVIVRLALHPLNAKQMRSMQQMQRLQPRLK 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
            L+EK+       L +  + LYK + +NP +GC P+++Q+P+   ++ V+  +       
Sbjct: 61  VLQEKYANDRDT-LSRETMALYKENKVNPASGCLPLIIQLPILILLFNVLRDASAQFGES 119

Query: 458 FW----GWIKDLAA----------------ADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
            +         L++                 D              +  ++ +    + +
Sbjct: 120 TFCGVPLAGTVLSSIAKAVGFSGDPLTAGFMDTCRAVGANPAGLSAVGVWLPITFLLLFI 179

Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
               + Q K+S    +   A +   MP+   F   S P GL++YW  S++ +++QQ   +
Sbjct: 180 VFLTWYQQKLS-AQGNPQMATMNVVMPIFMGFICLSMPGGLLLYWMLSSLFAVIQQWFTV 238

Query: 558 KMHGAEIG 565
                E  
Sbjct: 239 HKVAKEEK 246


>gi|228476491|ref|ZP_04061181.1| membrane protein OxaA 2 [Streptococcus salivarius SK126]
 gi|228251912|gb|EEK10958.1| membrane protein OxaA 2 [Streptococcus salivarius SK126]
          Length = 305

 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 104/255 (40%), Gaps = 31/255 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM----KN 391
           W W         ++  +  NL   FG+ I+  T+ V+L+  PL   Q  S A      + 
Sbjct: 36  WVWNLLGRPMSHVITYFADNLGLGFGLGIIFVTIIVRLIILPLGLHQSRSAAYQSAKREY 95

Query: 392 IQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           + P ++ + E+ + +  Q  +      ++Q  + + ++ +   GC P+L+Q P F A+Y 
Sbjct: 96  LAPILEPINERLRNAETQEEKMAAQSELMQAQRENGLSLMGGVGCLPLLIQFPFFSALYY 155

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +     + W  +L   D                 F  + I   +     ++ +
Sbjct: 156 AARYTPGVLQ-DNFLWF-NLGHRD-----------------FPLIIIIAALYYFQSWLSI 196

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           +  P    K  A  +  MP++ +F   S PA +I+YW    + SI+QQ +    +  +  
Sbjct: 197 QQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWFVGGIFSIIQQLITN--YIIKPR 254

Query: 566 LIDRLRSTFSKNYNS 580
           L +++   F KN   
Sbjct: 255 LKEKVAEEFKKNPPK 269


>gi|301300482|ref|ZP_07206681.1| putative stage III sporulation protein J [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851929|gb|EFK79614.1| putative stage III sporulation protein J [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 263

 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 30/228 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           W ++I       +    ++ GN +G  I++ T+ V+++  PL   Q  S      +QPK+
Sbjct: 22  WDHYIVWNFIRAIQGLSHIFGNSYGWGIVIFTIIVRIIILPLMIYQMKSMRQTMELQPKL 81

Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             L+EK+        Q+L K   +LY    INP A   P+++Q+P+ FA+Y+ I  S  +
Sbjct: 82  KALQEKYPGKDMESRQMLAKEQQKLYSEAGINPFASILPLIVQMPILFALYQAIFRSDVL 141

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           + +  + W++ L   DP                     I PI+ ++  ++  K++   A 
Sbjct: 142 K-SGTFFWMQ-LGDKDPYY-------------------ILPILAAIFTWLTSKLN-SMAQ 179

Query: 514 KGQAMI---LNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             Q  I   + W MP++      + PA L +YW  +N+ S  Q  +I 
Sbjct: 180 PEQNTITTVMTWSMPIMIFVFALNVPAALSLYWVITNLFSAGQTLLIN 227


>gi|258541100|ref|YP_003175599.1| stage III sporulation protein J [Lactobacillus rhamnosus Lc 705]
 gi|257152776|emb|CAR91748.1| Stage III sporulation protein J [Lactobacillus rhamnosus Lc 705]
          Length = 278

 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 21/252 (8%)

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           P  E    +   Y +      ++       GN G+ I+  T+ +++L FPL+     S A
Sbjct: 29  PVSENSTGFWDRYVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYLSIKSMA 88

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
             + I P++ EL++K+     +   K      +LY +  +NP+ GC PI++Q+P   A+Y
Sbjct: 89  KQQEIAPQLKELQKKYSSKDTETQTKLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALY 148

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           + I  +  +  +  + W+ +L+  DP  I                  I   + +L   I 
Sbjct: 149 QAILRTSSL-QSGTFLWM-NLSQPDPLWIMQ----------------ILATLFTLGTSIL 190

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
             M+ P  +    +++   P +      + P+ L IY   +N  S+VQQ +I        
Sbjct: 191 SMMAQPTRNSSSWVMMIISPAMIFVFSVTLPSALAIYSVVTNAFSMVQQLLIQNPFKIRR 250

Query: 565 GLIDRLRSTFSK 576
              ++ R+   K
Sbjct: 251 EREEKARAEKEK 262


>gi|315654393|ref|ZP_07907301.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
 gi|315491428|gb|EFU81045.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
          Length = 441

 Score =  117 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 28/256 (10%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
            GW       M  L          + +AI+  T+ V+L+  PL  KQ  ++  M   QP+
Sbjct: 28  VGWILRGVHEMITLFGVESGAGIGWVLAIVGMTIVVRLIIVPLFIKQIKASRAMSLAQPE 87

Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +  + +K+K    Q      Q+ M  + K +  +  A C P+L+Q+PV FA+Y+++    
Sbjct: 88  LTAITKKYKGKRDQQTMMRQQEEMKAVQKKYGASMSASCLPLLVQMPVLFALYRLLYYMS 147

Query: 452 EMRHAPF--------WGWIKDLAAADPTNIFTLFGILPFYLPGF----MHVGIWPIIMSL 499
            + H            G  +  A  D T      G   F         + +GI    + +
Sbjct: 148 AVAHGTMPEHDSIGGMGQQQAKALWDSTFFGESLGQTMFGPTSTLQTKIVIGIMVAFLVI 207

Query: 500 SMFIQMK-MSPPPADKGQ-----------AMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
           +MF+Q   +S       Q             ++ +MP+V++F       GL+IYW  SN 
Sbjct: 208 TMFVQTAFLSMKNMSDEQLNSDNPMVKSTKSMMYFMPLVYLFTGPVVQVGLLIYWVTSNT 267

Query: 548 ISIVQQAVIMKMHGAE 563
            S+VQQ  +++ +   
Sbjct: 268 WSLVQQYFMIRAYPTR 283


>gi|90962705|ref|YP_536621.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118]
 gi|90821899|gb|ABE00538.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118]
          Length = 279

 Score =  117 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 30/228 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           W ++I       +    ++ GN +G  I++ T+ V+++  PL   Q  S      +QPK+
Sbjct: 38  WDHYIVWNFIRAIQGLSHIFGNSYGWGIVIFTIIVRIIILPLMIYQMKSMRQTMELQPKL 97

Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             L+EK+        Q+L K   +LY    INP A   P+++Q+P+ FA+Y+ I  S  +
Sbjct: 98  KALQEKYPGKDMESRQMLAKEQQKLYSEAGINPFASMLPLIVQMPILFALYQAIFRSDVL 157

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           + +  + W++ L   DP                     I PI+ ++  ++  K++   A 
Sbjct: 158 K-SGTFFWMQ-LGDKDPYY-------------------ILPILAAIFTWLTSKLN-SMAQ 195

Query: 514 KGQAMI---LNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             Q  I   + W MP++      + PA L +YW  +N+ S  Q  +I 
Sbjct: 196 PEQNTITTVMTWSMPIMIFVFALNVPAALSLYWVITNLFSAGQTLLIN 243


>gi|327438165|dbj|BAK14530.1| preprotein translocase subunit YidC [Solibacillus silvestris
           StLB046]
          Length = 260

 Score =  117 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 23/234 (9%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            + +   + +    F     N+  AI++ TV ++L+  PL  KQ  S+  M+ +QPK+ E
Sbjct: 41  VWPLVSFIKLFADMFEGNAANYAFAIIIVTVIIRLIILPLTIKQVKSSKKMQEMQPKLKE 100

Query: 399 LREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           L+ K+        Q  Q+ M+QL +T  +NPLAGC PIL+Q+P+    Y  IS       
Sbjct: 101 LQAKYSSKDAATQQKYQQEMMQLMQTSGVNPLAGCLPILIQMPILIGFYHAISRMN---- 156

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
                     A  D       F  +P   P      ++ +I  L  ++ +   P   +  
Sbjct: 157 ----------ATPD-AFELGTFLAVPLAEPSI----VFAVIAGLIQYVVLMTGPAVDNPQ 201

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM-HGAEIGLID 568
             +++  MP++ V      PA L +YW   N +S++Q  VI K  +  +    D
Sbjct: 202 MKIMMYIMPLMIVGFGIILPAALSLYWVVGNFVSVLQNLVIYKPWNKNKPDATD 255


>gi|312864045|ref|ZP_07724281.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           vestibularis F0396]
 gi|311100458|gb|EFQ58665.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           vestibularis F0396]
          Length = 305

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 31/255 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM----KN 391
           W W         ++  +  NL   FG+ I+  T+ V+L+  PL   Q  S A      + 
Sbjct: 36  WVWNLLGRPMSHVITYFANNLGLGFGLGIIFVTIIVRLIILPLGLHQSRSAAYQSAKREY 95

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           + P ++ + E+ + +  Q      Q  ++Q  + + ++ +   GC P+L+Q P F A+Y 
Sbjct: 96  LAPILEPINERLRNAKTQEEKLAAQSELMQAQRENGLSLMGGVGCLPLLIQFPFFSALYY 155

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +     + W  +L   D                 F  + I   +     ++ +
Sbjct: 156 AARYTPGVL-KDDFLWF-NLGHRD-----------------FPLIIIIAALYYFQSWLSV 196

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           +  P    K  A  +  MP++ +F   S PA +I+YW    + SI+QQ +    +  +  
Sbjct: 197 QQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWFVGGIFSIIQQLITN--YIIKPR 254

Query: 566 LIDRLRSTFSKNYNS 580
           L +++   F KN   
Sbjct: 255 LKEKVAEEFKKNPPK 269


>gi|322517496|ref|ZP_08070369.1| membrane protein [Streptococcus vestibularis ATCC 49124]
 gi|322123978|gb|EFX95537.1| membrane protein [Streptococcus vestibularis ATCC 49124]
          Length = 305

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 105/255 (41%), Gaps = 31/255 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM----KN 391
           W W         ++  + +NL   FG+ I+  T+ V+L+  PL   Q  S A      + 
Sbjct: 36  WVWNLLGRPMSHVITYFAHNLNLGFGLGIIFVTIIVRLIILPLGLHQSRSAAYQSAKREY 95

Query: 392 IQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           + P ++ + E+ + +  Q  +      ++Q  + + ++ +   GC P+L+Q P F A+Y 
Sbjct: 96  LAPVLEPINERLRNAETQEEKMAAQSELMQAQRENGLSLMGGVGCLPLLIQFPFFSALYY 155

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +     + W  +L   D                 F  + I   +     ++ +
Sbjct: 156 AARYTPGVL-KDDFLWF-NLGHRD-----------------FPLIIIIAALYYFQSWLSI 196

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           +  P    K  A  +  MP++ +F   S PA +I+YW    + SI+QQ +    +  +  
Sbjct: 197 QQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWFVGGIFSIIQQLITN--YIIKPR 254

Query: 566 LIDRLRSTFSKNYNS 580
           L +++   F KN   
Sbjct: 255 LKEKVAEEFKKNPPK 269


>gi|312867510|ref|ZP_07727718.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           parasanguinis F0405]
 gi|311096916|gb|EFQ55152.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           parasanguinis F0405]
          Length = 293

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 34/236 (14%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---P 408
            F +  G+ G+ I++ T+ ++ +  PL + Q  ST  M+ IQP + EL+ K+        
Sbjct: 46  RFLSFGGSIGVGIIVFTIVIRTVLLPLFQYQMNSTRKMQEIQPLLKELQAKYPGKDLDSR 105

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L + M  LYK   +   +   P+L+Q+PV  A+++ +S  +E      + W+ DL A 
Sbjct: 106 TKLSEEMRALYKEKGVKTSSAFLPLLIQMPVLMALFQALSR-VEFLKVGHFLWL-DLGAI 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPV 525
           DPT                    I P++ +L  F    ++    P  +     ++  MPV
Sbjct: 164 DPTY-------------------ILPVLAALFTFFSSWLTNKAMPERNGSATTMMYVMPV 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +  F      +G+ +YW  SN   + Q  ++             +    +K   S+
Sbjct: 205 MIFFFALFSASGVALYWVTSNAYQVGQTYLLN-------NPFKIIAEREAKEQASR 253


>gi|134103814|ref|YP_001109475.1| putative inner membrane protein translocase component YidC
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291005728|ref|ZP_06563701.1| putative inner membrane protein translocase component YidC
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133916437|emb|CAM06550.1| preprotein translocase YidC subunit [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 336

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 99/259 (38%), Gaps = 26/259 (10%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            F         +F  +    ++         + ++++     ++ L F     Q  S   
Sbjct: 3   DFIYYPVSAILWFWHEVFGFVLDPASGFA--WALSVVFLVFTLRALLFKPFVHQVRSMKK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+   P I  L+EK+     Q + + M +L   H  NP++GC P+L+Q+PVF  ++ V++
Sbjct: 61  MQEFAPHIKALQEKYGD-DRQKMAQEMQKLQAEHGFNPVSGCLPMLVQVPVFIGLFHVLN 119

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTL------------FGILPFYLPGFMHVGI-WPI 495
                  + +    +D+A+    ++F                         + VG+   I
Sbjct: 120 GFRPGAPSNYVFGAEDVASFVEADLFGAKLSNTISQAPEMLAHFQTDRTSMLLVGVPLMI 179

Query: 496 IMSLSMFIQ-----MKMSPPPADKGQAMILNWMPV----VFVFALSSF-PAGLIIYWSWS 545
             +++          + +   A   Q  ++N M +    +F      F P  ++IYW  +
Sbjct: 180 AAAIATHFTARHGVQRQTAEAAQNPQTAVMNRMTLWLFPMFAIIGGPFLPLAILIYWLAN 239

Query: 546 NVISIVQQAVIMKMHGAEI 564
           N  ++ QQ V+ +    E 
Sbjct: 240 NFWTLGQQRVVYRRIDREE 258


>gi|167759573|ref|ZP_02431700.1| hypothetical protein CLOSCI_01930 [Clostridium scindens ATCC 35704]
 gi|167662800|gb|EDS06930.1| hypothetical protein CLOSCI_01930 [Clostridium scindens ATCC 35704]
          Length = 360

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 59/268 (22%), Positives = 112/268 (41%), Gaps = 23/268 (8%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           W     +     +L S   +  G  G++I++ T+ V     PL  KQ  +      + P+
Sbjct: 24  WLLGKVMNFIYTILDSILPSDSGLVGLSIIIYTILVYTCMMPLTIKQQRTAKMSSVMNPE 83

Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--- 448
           +  +++K+K    Q      Q+ M Q+Y  +  +   GC P+L+Q+P  FA+Y VI    
Sbjct: 84  LQAIQKKYKNKRDQASMLKQQEEMQQVYDKYGTSMTGGCLPLLIQMPFLFALYPVIYDIQ 143

Query: 449 -ISLEMRHAPF----WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
                +++AP     +  I +L  +    I              +   + PII  L+ ++
Sbjct: 144 TYVPAIKNAPDAVNRFITIPNLTVSPTVMIKNSGDYGLPAAVIIVTAILLPIISGLTQYL 203

Query: 504 QMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            +++S            P       +   MP+  +F + + P G+ +YW  S V+  VQQ
Sbjct: 204 SIRLSQSISGQQLDKDNPMAGTMKTMNMTMPLFSIFMVFTLPTGIGLYWIISAVVRCVQQ 263

Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            +I K H +++ + D +     K    +
Sbjct: 264 LMINK-HLSKMSVDDLIEKNREKAAKKR 290


>gi|115757016|ref|XP_790253.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115961418|ref|XP_001176925.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 441

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 83/210 (39%), Gaps = 37/210 (17%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ-------SPPQVLQ 412
           +  +I++ T+ V+   FPL  K    T  + N  P   ++ ++                 
Sbjct: 165 WWASIVVGTLIVRACVFPLMLKNMKYTIRLNNCMPIFQKISKEMNDAKACGDQFEMTRKS 224

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468
             + Q  K +++NPL     ILLQ P+F      + ++ ++ +E        W  DL  +
Sbjct: 225 MELQQFMKKNDVNPLKSFAGILLQAPIFISFFIGLRRMATLPVESMQTGGLWWFTDLTTS 284

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM------SPPPADKGQAMILNW 522
           DP                       P+I SLSMF+ M++      S   A K    +L  
Sbjct: 285 DPYY-------------------ALPVIASLSMFLVMELGGEAGVSNAQAQKM-RNVLRV 324

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           MP V +  ++S P  +  YW  SN  S+ Q
Sbjct: 325 MPFVVLPFIASLPKAVFCYWLTSNFFSVFQ 354


>gi|320095103|ref|ZP_08026812.1| membrane protein OxaA [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319977970|gb|EFW09604.1| membrane protein OxaA [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 447

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 111/234 (47%), Gaps = 31/234 (13%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAM 415
           + ++I+L T+ V++   PL  KQ  S+  M+ +QP+I +++EK+K        Q + +  
Sbjct: 37  WVLSIVLLTILVRVAIVPLLLKQIRSSRAMQAVQPEIRKIQEKYKGKKDMVSRQKMTEET 96

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH---------APFWGWIKDLA 466
             LY+ H ++P A C P+L+Q+PV FA+Y+ I    ++           A   G I    
Sbjct: 97  QALYRKHKVSPFASCLPLLVQMPVLFAMYRAIYAVKDLAEGTYTYSGQAASSLGPITQTT 156

Query: 467 AADPTNIFTLFGILPFYL--------PGFMHVGIWPIIMSLSMFIQMKM----SPP---- 510
           A++  N  T+FG+   +            +   +  I+M    F+ M++    + P    
Sbjct: 157 ASE-INGSTVFGVPLSHTLRTETSNSSAAIVFVVAIILMVALQFVSMRLSFSRNMPDMGS 215

Query: 511 -PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            P  + Q  ++  MPV+FVF+   F  G+++Y   S+  ++ Q    +K+    
Sbjct: 216 NPMARSQRSMMYVMPVMFVFSGVFFQMGVVVYTVTSSFWALGQAYWTIKVMPTP 269


>gi|157114183|ref|XP_001652200.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes
           aegypti]
 gi|108877434|gb|EAT41659.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes
           aegypti]
          Length = 422

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 95/269 (35%), Gaps = 48/269 (17%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLT-TVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     +   M + +         ++   T+ V+L+ FPL      + A M N  P++  
Sbjct: 119 WTPVGIVQNCMEFLHVGCDLPWWGVIAIGTICVRLVLFPLVIASQRNAAKMNNHMPQMQV 178

Query: 399 LREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVI 447
           L+ K  ++             + M+   K  N+NPL      L Q P+F      + ++ 
Sbjct: 179 LQMKMTEARQAGNSIDSARYAQEMVAFMKEKNLNPLKNMLVPLAQAPIFISFFMGLRQMA 238

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +  +E        W  DL   D                        PII S++MF+ +++
Sbjct: 239 NTPVESMREGGLFWFTDLTVCDQFY-------------------ALPIITSITMFLTIEL 279

Query: 508 SP----PPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ--------- 552
                   A   Q +  +L  MP+       +FP  ++ YW+ SN  S++Q         
Sbjct: 280 GTDSARMSAQNMQMVRYVLRAMPLFIFPFTINFPGAILCYWACSNFFSLLQVGFLRIPKV 339

Query: 553 --QAVIMKMHGAEIGLIDRLRSTFSKNYN 579
                I ++   +   +   +  F++   
Sbjct: 340 RDYFKIERLVTHKPETLPIKKKKFTEGMK 368


>gi|171779011|ref|ZP_02920019.1| hypothetical protein STRINF_00894 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282369|gb|EDT47794.1| hypothetical protein STRINF_00894 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 271

 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 111/257 (43%), Gaps = 29/257 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+       +      F     + ++ G  G+ I+L T+ ++ +  PL   Q  S   M+
Sbjct: 25  EVTASSTNGWEQIVYFFAKAIQWLSINGRIGVGIVLFTIIIRAIMMPLYNMQIKSGQKMQ 84

Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           N+QP++ +L+EK+          L +    LYK + +NP A   P+++Q+P+  A+Y+ +
Sbjct: 85  NLQPELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVVQLPILMALYQAL 144

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +    ++    + WI+ L+  DP                     I P++ +L  F+   +
Sbjct: 145 TRVAFLK-TGTFLWIE-LSQPDPYY-------------------ILPVLAALFTFLSTWL 183

Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           +   A   +    ++   MP++  F      +G+++YW+ SN   + Q  ++   +  +I
Sbjct: 184 TNKAAREKNFAMTLMTYVMPIIIFFFGFRLASGVVLYWTVSNAFQVFQILLLN--NPFKI 241

Query: 565 GLIDRLRSTFSKNYNSQ 581
                 +    K + ++
Sbjct: 242 IAEREAKERAEKEHAAK 258


>gi|297622618|ref|YP_003704052.1| membrane protein insertase, YidC/Oxa1 family [Truepera radiovictrix
           DSM 17093]
 gi|297163798|gb|ADI13509.1| membrane protein insertase, YidC/Oxa1 family [Truepera radiovictrix
           DSM 17093]
          Length = 562

 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 24/223 (10%)

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           ++  + +++   Y +VG++G+AI+L T+  + L +PL   Q  S   M+ IQPK+ EL++
Sbjct: 311 LSLGIIVVLEAIYGVVGSWGLAIILLTLLFRALVWPLISAQTKSMVGMQKIQPKMQELQK 370

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           K+K    + L +  ++LY+   +NP  GC PIL+Q+P+F  +++V    +       + W
Sbjct: 371 KYKNDREK-LTQETMKLYQEAGVNPAGGCLPILVQMPIFIILWRVF---INFEFNEGFLW 426

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
           I DL  +DP                     + PI+    M  Q  ++     +     L 
Sbjct: 427 IPDLGLSDPFY-------------------LLPILYVAVMVGQSVVASKGNTQMLRQQLL 467

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
               VFVF +  FPAG+ +Y   S +I ++QQ +I +   A  
Sbjct: 468 I-SGVFVFFIFGFPAGVTLYLITSMLIQVLQQWLIQRNMDAAP 509


>gi|209558773|ref|YP_002285245.1| Membrane protein oxaA 1 precursor [Streptococcus pyogenes NZ131]
 gi|209539974|gb|ACI60550.1| Membrane protein oxaA 1 precursor [Streptococcus pyogenes NZ131]
          Length = 269

 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 27/212 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
            + +  G+ G+ I+L T+ ++L+  PL   Q  S+  M++IQP++ EL++K+     Q  
Sbjct: 45  QWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTQTR 104

Query: 412 QK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
            K       LYK + +NP A   P+L+Q+PV  A+++ ++    ++    + W++ LA  
Sbjct: 105 MKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLK-TGTFLWVE-LAQH 162

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525
           D                   H+ + P++ ++  F+   ++   A   +    +++  MP+
Sbjct: 163 D-------------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPL 203

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +  F   +  +G+++YW+ SN   +VQ  ++ 
Sbjct: 204 MIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 235


>gi|255547956|ref|XP_002515035.1| conserved hypothetical protein [Ricinus communis]
 gi|223546086|gb|EEF47589.1| conserved hypothetical protein [Ricinus communis]
          Length = 499

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 18/232 (7%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++   +G AI+L TV VK   FPL KKQ  S   M+++QP+I  +++++  +  ++    
Sbjct: 130 HVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQQYAGNQEKIQL-E 188

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNI 473
             +LYK   INP AGC P L  IPV+  +Y+ +S  + E      + WI  LA       
Sbjct: 189 TARLYKLAGINPFAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAA 248

Query: 474 FTLFGILPFYLPGFMHVGIW-----------PIIMSLSMFI-----QMKMSPPPADKGQA 517
                 + +  P                   P+++ +S +I     Q   +  P  K   
Sbjct: 249 RQNGSGISWLFPFVDGHPPLGWYDTFAYLVLPVLLVVSQYISVQIMQSSQNNDPNMKSSQ 308

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            I   +P++  +   S P+GL +YW  +N++S  QQ  + K+ GA+  +   
Sbjct: 309 AITQLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVSQE 360


>gi|331268192|ref|YP_004394684.1| membrane protein oxaA [Clostridium botulinum BKT015925]
 gi|329124742|gb|AEB74687.1| Membrane protein oxaA [Clostridium botulinum BKT015925]
          Length = 220

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 8/212 (3%)

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           ++G+ I++ T+ ++++ FPL  KQ  S   M  IQP++ +L+EK+K   PQ  Q+ M++L
Sbjct: 16  SYGLTIIVLTLIIRIVLFPLNYKQIKSQVGMTEIQPELKKLQEKYKN-DPQRQQQEMMKL 74

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           YK + +NPL GC P+L+Q P+  A++ V +     +  P    +  L       +     
Sbjct: 75  YKEYGVNPLGGCLPLLVQWPILIALFYVFNNL--SKIEPSIVNVTFLGVK----LMEPAI 128

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN-WMPVVFVFALSSFPAG 537
           + P Y   ++   +  ++   S  I    +   A   Q  +++ +M +  V+    FP  
Sbjct: 129 LKPEYWYTWILPIVSALLTYFSTVIMTSKNADSAQVKQTKMMSGFMTLFVVYMSFKFPTA 188

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           L++YW  +++  I Q  +  +    +  LI  
Sbjct: 189 LVLYWITNSLFQIGQTIITQRSQQKKKELIQE 220


>gi|15672111|ref|NP_266285.1| hypothetical protein L131778 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281490609|ref|YP_003352589.1| preprotein translocase subunit YidC [Lactococcus lactis subsp.
           lactis KF147]
 gi|38503175|sp|Q9CJ72|OXAA1_LACLA RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|12722977|gb|AAK04227.1|AE006251_3 hypothetical protein L131778 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281374415|gb|ABX75661.2| Preprotein translocase subunit YidC [Lactococcus lactis subsp.
           lactis KF147]
          Length = 269

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 111/243 (45%), Gaps = 34/243 (13%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP--- 408
            F +  G  G+ I+L T+ ++    PL   Q  S+  M+ IQP+I +++ K+        
Sbjct: 46  RFLSFGGLTGVGIILFTIVIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKDMESR 105

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           +++ + + +LY  + +NP  GC P+++Q+PV +A+Y+ +S    ++H   + W + + A 
Sbjct: 106 RLMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKH-GTFLWFE-IGAK 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525
           DPT                    I PI+ ++  F+   +    A   +     +   MP+
Sbjct: 164 DPTF-------------------ILPILAAVFTFLSSYLMMKSAPERNAMTTSMTYIMPI 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAV------IMKMHGAEIGL-IDRLRSTFSKNY 578
             +    +F AG+ +YW  SN   + Q  +      I+    A++ +  D++++      
Sbjct: 205 FILIMGVNFAAGIALYWVISNAFQVFQTMLLANPYKIIAAREAKVQVEKDKIKAREKALK 264

Query: 579 NSQ 581
            ++
Sbjct: 265 KAR 267


>gi|315223127|ref|ZP_07864995.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           anginosus F0211]
 gi|315187816|gb|EFU21563.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           anginosus F0211]
          Length = 305

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 104/264 (39%), Gaps = 39/264 (14%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF----PLAKKQYVST 386
                + W          +  +  N+   FG+AI++ T+ V+L+        + K    +
Sbjct: 29  GKPAGFVWDIIGRPMSLAIQYFANNMGLGFGVAIIIVTLIVRLIILPLGLYQSWKSTYQS 88

Query: 387 ANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
             M  ++P  + ++E+ K +  Q      Q+A++   K + +N L   GC P+L+Q+P F
Sbjct: 89  EKMNYLKPIFEPIQERMKNAETQEEKLAAQQALMTAQKENGVNMLGGIGCLPLLIQLPFF 148

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            A+Y     +  +  +                   +F  +P      +      +I+ + 
Sbjct: 149 SALYFSAQYTEGVAKS-------------------VFLGIPLGKASVL----LTVIVGVL 185

Query: 501 MFIQMKMSPPPADKGQA----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            FIQ  ++    D+ Q      ++   P++ V    + PAG+ +YW     I I+QQ +I
Sbjct: 186 YFIQSALTLVGIDEVQKEQMKKMMYMSPLMIVIFSFTAPAGVTLYWVVGGFIMIIQQLII 245

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580
              H     L  R+   +  N   
Sbjct: 246 N--HYIRPQLRKRVAEEYKNNPPK 267


>gi|288574742|ref|ZP_06393099.1| 60 kDa inner membrane insertion protein [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570483|gb|EFC92040.1| 60 kDa inner membrane insertion protein [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 259

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 23/246 (9%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            +   +  M+ L+S  +N VG++G+A+++ T+ V+LL  PL  KQ VS   M+ +QP+I 
Sbjct: 1   MWEAASNAMYGLLSTIHNFVGSWGLAVIVLTLLVRLLLHPLNHKQLVSMQKMQKLQPRIK 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
            L+EK+K      L +  + LYK + +NP AGC P+L+Q+P+   +++V+  S +   A 
Sbjct: 61  MLQEKYKDDKE-GLSRETMALYKENKVNPAAGCLPLLVQLPILILLFRVLMNS-DFGGAS 118

Query: 458 FWGWIKDLA------------AADPTNIFT-----LFGILPFYLPGFMHVGIWPIIMSL- 499
           F G   + +            AA+ TNI            P  L  F   G   +++ L 
Sbjct: 119 FLGITLEGSVLTTMAEALGVVAAEGTNIGFMTVVKAIMANPSGLASFGLYGPNLLLLGLI 178

Query: 500 --SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
               + Q +MS    +   AM+  +MPV   F   S P G+++YW  S+ I + QQ  ++
Sbjct: 179 IFVTWYQQRMS-STGNPQMAMMNWFMPVFMGFICLSLPGGVMLYWGASSFIGVGQQWWVL 237

Query: 558 KMHGAE 563
                E
Sbjct: 238 HKTSQE 243


>gi|322390329|ref|ZP_08063857.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis
           ATCC 903]
 gi|321142977|gb|EFX38427.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis
           ATCC 903]
          Length = 279

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 34/236 (14%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---P 408
            F +  G+ G+ I++ T+ ++ +  PL + Q  ST  M+ IQP + EL+ K+        
Sbjct: 54  RFLSFGGSIGVGIIVFTIVIRTVLLPLFQYQMNSTRKMQEIQPLLKELQAKYPGKDLDSR 113

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L + M  LYK   +   +   P+L+Q+PV  A+++ +S  +E      + W+ DL A 
Sbjct: 114 TKLSEEMRALYKEKGVKTSSAFLPLLIQMPVLMALFQALSR-VEFLKVGHFLWL-DLGAI 171

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525
           DPT                    I P++ +L  F    ++       +     ++  MPV
Sbjct: 172 DPTY-------------------ILPVLAALFTFFSSWLTNKALPERNGSATTMMYVMPV 212

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +  F      +G+ +YW  SN   + Q  ++             +    +K   S+
Sbjct: 213 MIFFFALFSASGVALYWVTSNAYQVGQTYLLN-------NPFKIIAEREAKEQASR 261


>gi|256548863|gb|ACU82913.1| 60 kD inner-membrane protein [Buchnera aphidicola (Acyrthosiphon
           pisum)]
          Length = 310

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/319 (17%), Positives = 128/319 (40%), Gaps = 22/319 (6%)

Query: 71  VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130
           + +KN  +   +N+ G   ++ +L  Y   + S+ P   L   + +   Y A+   +   
Sbjct: 1   IFIKNDVISLVVNMYGGDVEEASLLAYKDTLYSSRPFKLL--ETGSDFIYQAQSGLIGKD 58

Query: 131 N-NIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDEH-YLFKIVD 184
             +  + +S  +++      +      +L     + + N +++++T  L  + Y  +I  
Sbjct: 59  GPDSSINDSRPLYSANKNFFVLGPNEKELRVPIKWLSKNGVIYKKTFILKPNRYDVQIEY 118

Query: 185 TVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
            V N S + +  +  G+I +           +         G      D    + K+  I
Sbjct: 119 DVYNASKESLNMNIFGQIKQTINLPKKRNVYSGNFALQTFRGAAYSSDDNKYEKYKFDMI 178

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
             +   +    + W+ +  +Y+A  +IP            L   H      + +  I I 
Sbjct: 179 ANNKNLHIITESGWIAMLQQYFAVAWIPDNLGKNTIYTSSLD--HDTAVIGYKSPIINIP 236

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
           P       + L+ G +    +         P  ++ +D+GW +F+++P+F L++  Y+++
Sbjct: 237 PNSRSIIKSKLWIGPEIQKEMKLVA-----PNLDLTVDYGWLWFLSQPLFKLLTILYSII 291

Query: 358 GNFGIAIMLTTVFVKLLFF 376
           GN+G +I+L T  ++ L +
Sbjct: 292 GNWGFSIILITFIMRGLTY 310


>gi|55820342|ref|YP_138784.1| OxaA-like protein [Streptococcus thermophilus LMG 18311]
 gi|116627178|ref|YP_819797.1| OxaA-like protein precursor [Streptococcus thermophilus LMD-9]
 gi|55736327|gb|AAV59969.1| cytochrome oxidase biogenesis (Oxa1) family protein, similar to
           SpoIIIJ [Streptococcus thermophilus LMG 18311]
 gi|116100455|gb|ABJ65601.1| Preprotein translocase subunit YidC [Streptococcus thermophilus
           LMD-9]
 gi|312277657|gb|ADQ62314.1| Preprotein translocase subunit YidC [Streptococcus thermophilus
           ND03]
          Length = 305

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 103/255 (40%), Gaps = 31/255 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM----KN 391
           W W         ++  +  NL   FG+ I+  T+ V+ +  PL   Q  S A      + 
Sbjct: 36  WVWNLLGRPMSHVITYFANNLGLGFGLGIIFVTIIVRSIILPLGLHQSRSAAYQSAKREY 95

Query: 392 IQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           + P ++ + E+ + +  Q  +      ++Q  + + ++ +   GC P+L+Q P F A+Y 
Sbjct: 96  LAPILEPINERLRNAKTQEEKMAAQSELMQAQRENGLSLMGGIGCLPLLIQFPFFSALYY 155

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +     + W  +L   D                 F  + I   +     ++ +
Sbjct: 156 AARYTPGVL-KDDFLWF-NLGHRD-----------------FPLIIIIAALYYFQSWLSI 196

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           +  P    K  A  +  MP++ +F   S PA +I+YW    + SI+QQ +    +  +  
Sbjct: 197 QQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWLVGGIFSIIQQLITN--YIIKPR 254

Query: 566 LIDRLRSTFSKNYNS 580
           L +++   F KN   
Sbjct: 255 LKEKVAEEFKKNPPK 269


>gi|225871157|ref|YP_002747104.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. equi
           4047]
 gi|225700561|emb|CAW95058.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. equi
           4047]
          Length = 306

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 97/286 (33%), Gaps = 31/286 (10%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
           TN +         +      +            W Y      F++  +  +    +G+AI
Sbjct: 5   TNRILFSGLALSVLLTLTGCVGRDAKGHPEGIIWDYLGKPVSFLIDYFANSTALGYGLAI 64

Query: 365 MLTTVFVKLLF--------FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           ++ T+ V+ +         +  + +           +P    ++           Q  ++
Sbjct: 65  IVVTIIVRTIILPLGLYQSWKASYQSEKMAYLKPFFEPINQRIKNATSTEEKMAAQTELM 124

Query: 417 QLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
              + + +NPL   GC P+L+Q+P F A+Y  +  +   +                    
Sbjct: 125 AAQRENGVNPLGGIGCLPLLIQMPFFSAMYVAVQFT---KGVST---------------- 165

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534
           + F  +       +   +   +  +  ++ M   P    +    +L  MP++ +      
Sbjct: 166 STFMGIDLGHRSVLLTAVIAALYFVQSWLSMMAVPEEQREQMKAMLYTMPIMMIVMSFYL 225

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           PAGL +YW      SI+QQ +    +  +  L  ++   F+KN   
Sbjct: 226 PAGLGLYWLVGGFFSIIQQLITT--YLLKPRLRKQIAEEFAKNPPK 269


>gi|227494185|ref|ZP_03924501.1| inner membrane insertion protein [Actinomyces coleocanis DSM 15436]
 gi|226831919|gb|EEH64302.1| inner membrane insertion protein [Actinomyces coleocanis DSM 15436]
          Length = 433

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/252 (21%), Positives = 115/252 (45%), Gaps = 25/252 (9%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
                      M +++         + ++I+  T+ V+ L  PL  +Q  +   M+ +QP
Sbjct: 13  FVAVIMVGIHKMLVMLGMNDGPGFAWVLSIIGLTMIVRTLLIPLFFRQIKAARGMQLVQP 72

Query: 395 KIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           ++ +L+EK+K    Q  ++     M+ LY+ H  +P A C PIL+Q+P+FFA+++V++ +
Sbjct: 73  ELKKLQEKYKDRKDQASKQKMSEEMMALYREHGTSPFASCMPILMQMPIFFALFRVLAST 132

Query: 451 LEMRHA----PFWGWIKDLAAAD--PTNIFTLFGILPF---YLPGFMHVGIWPIIMSLSM 501
             +          G + +  A D   +N+F  F    F        + + +  ++M  S 
Sbjct: 133 ATLAEGKYPGGSIGPLNEKLAQDIEDSNLFGAFLSDTFVTASGSARVVLVVLILLMMGSQ 192

Query: 502 FIQMK----MSPP-----PADKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
           F  M+     + P     P +     Q +++  MP++   +   F  G+++YW  +N+ +
Sbjct: 193 FFTMRQLTMKNMPESAKDPNNPMMRSQIIMMYLMPLMIGASGFYFQTGVLVYWFTTNMWT 252

Query: 550 IVQQAVIMKMHG 561
           + QQ   ++   
Sbjct: 253 MGQQFWTIERMP 264


>gi|300215289|gb|ADJ79705.1| 60 kDa inner membrane protein [Lactobacillus salivarius CECT 5713]
          Length = 279

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 30/228 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           W ++I       +    ++ GN +G  I++ T+ V+++  PL   Q  S      +QPK+
Sbjct: 38  WDHYIVWNFIRAIQGLSHIFGNSYGWGIVIFTIIVRIIILPLMIYQMKSMRQTMELQPKL 97

Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             L+ K+        Q+L K   +LY    INP A   P+++Q+P+ FA+Y+ I  S  +
Sbjct: 98  KALQGKYPGKDMESRQMLAKEQQKLYSEAGINPFASMLPLIVQMPILFALYQAIFRSDVL 157

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           + +  + W++ L   DP                     I PI+ ++  ++  K++   A 
Sbjct: 158 K-SGTFFWMQ-LGDKDPYY-------------------ILPILAAIFTWLTSKLN-SMAQ 195

Query: 514 KGQAMI---LNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             Q  I   + W MP++      + PA L +YW  +N+ S  Q  +I 
Sbjct: 196 PEQNTITTVMTWSMPIMIFVFALNVPAALSLYWVITNLFSAGQTLLIN 243


>gi|217966559|ref|YP_002352065.1| hypothetical protein [Dictyoglomus turgidum DSM 6724]
 gi|217335658|gb|ACK41451.1| 60 kDa inner membrane insertion protein [Dictyoglomus turgidum DSM
           6724]
          Length = 209

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 65/229 (28%), Positives = 114/229 (49%), Gaps = 29/229 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
               +A  +  ++  FY L GN+G+AI+   + V+++ +PL   Q  S    + IQP+I 
Sbjct: 1   MINALANGLGYILELFYKLTGNYGLAIIFLVILVRIILYPLTHAQLKSLFMQQKIQPEIK 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +++EKFK   PQ + K ++ LY+ + INP+ GC P+L+Q P+  A+Y+++    +    P
Sbjct: 61  KIQEKFKD-DPQEMNKQIMLLYQQYKINPMMGCLPLLIQFPILIALYQLLLH-YKYAVTP 118

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ---MKMSPPPADK 514
            + WI DL   D                      I  IIM++  +       +S  P  K
Sbjct: 119 QFLWISDLTKPD---------------------YILLIIMAIVTYFSGELSSLSAAPEQK 157

Query: 515 GQAMILNWMP-VVFVFAL--SSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            Q  I+N    ++F         PAG+++YW  S++  ++QQ V+ ++H
Sbjct: 158 NQQRIMNIFTTLLFTGMFLLYKVPAGVMLYWLVSSLFQLLQQVVVFRLH 206


>gi|269977737|ref|ZP_06184697.1| membrane protein OxaA [Mobiluncus mulieris 28-1]
 gi|306817498|ref|ZP_07451242.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|307699977|ref|ZP_07637028.1| membrane protein insertase, YidC/Oxa1 family [Mobiluncus mulieris
           FB024-16]
 gi|269934041|gb|EEZ90615.1| membrane protein OxaA [Mobiluncus mulieris 28-1]
 gi|304649722|gb|EFM47003.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|307615015|gb|EFN94233.1| membrane protein insertase, YidC/Oxa1 family [Mobiluncus mulieris
           FB024-16]
          Length = 445

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 28/233 (12%)

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKA 414
            + ++I+  TVFV+LL  PL  KQ  +T  M   QP++  +++K+K    Q     +Q+ 
Sbjct: 51  GWVLSIVGLTVFVRLLLVPLFVKQIKATRAMSLAQPEMSAIQKKYKGKRDQQSMIRMQEE 110

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-----EMRHAPFWGWIKDLAAAD 469
              + + +  +  A C PIL Q+PVFFA+Y+++          +      G +  + A D
Sbjct: 111 TRAVQRKYGASMSASCLPILFQMPVFFALYRLLYNMKPIADGVLPGHDSIGGMGQVQAQD 170

Query: 470 ---PTNIFTLFGILPFYLPGFMHVGIWPIIMSL----SMFIQMK-MSPPPADKGQ----- 516
               T      G+  F     M   I   +M      SM  Q   ++     + Q     
Sbjct: 171 LWHSTFFGQSLGLTMFGPGSIMSTKIVVGLMVAYLVLSMLFQTAFLTMKNMSQEQLNSDN 230

Query: 517 ------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                   ++  MP++++F       GL++YW  SN   I+QQ  IM+     
Sbjct: 231 PMVKSTKSMMYLMPLMYLFTGPVVQVGLLVYWVTSNTWMILQQFFIMRAFPTR 283


>gi|28493772|ref|NP_787933.1| inner membrane protein translocase component YidC [Tropheryma
           whipplei str. Twist]
 gi|28476814|gb|AAO44902.1| stage III sporulation protein J-like protein [Tropheryma whipplei
           str. Twist]
          Length = 333

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 34/264 (12%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                +   + +      ++ ++I+   + ++    P+  KQ  +   M  I P++  ++
Sbjct: 48  VFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLIPVFLKQIRAQRKMLEIAPEVRRIQ 107

Query: 401 EKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS------ 450
           EK+K        Q + + M+++Y+    NPL+ C PI+LQ+PVFF +Y+VI  +      
Sbjct: 108 EKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLPIVLQMPVFFGLYQVIESAQNAGTG 167

Query: 451 ---------LEMRHAPFWG--WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
                    ++ R +  +G   + D  + D      L     F L   +  G+   IM  
Sbjct: 168 VGPLNGPLGMDFRDSRIFGVVPLHDSFSHDFY---ALQAGQAFNLITMIVAGVLTAIMIA 224

Query: 500 SMFIQM-KMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
                  K+ P             K Q ++L  +P++F+    SFP G++IYW+ SNV S
Sbjct: 225 VQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFLGMGFSFPVGILIYWTASNVWS 284

Query: 550 IVQQAVIMKMHGAEIGLIDRLRST 573
            VQQAV +  + +   L   LR  
Sbjct: 285 AVQQAVAIYRNPSPGSLAFELRRK 308


>gi|300174207|ref|YP_003773373.1| membrane protein OxaA [Leuconostoc gasicomitatum LMG 18811]
 gi|299888586|emb|CBL92554.1| Membrane protein oxaA 1 precursor [Leuconostoc gasicomitatum LMG
           18811]
          Length = 279

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 100/261 (38%), Gaps = 35/261 (13%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
                W   +A     ++        N+G+ I++ T+ ++ L  PL   Q  S   M+ +
Sbjct: 38  ASHSLWSAVVAAFTSAILGASAWFGNNYGMGIIVFTILIRFLILPLMVYQIQSMMKMQIV 97

Query: 393 QPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           QP +  L+ K+        Q++      LYK   +NP A   P+++Q+PV  A+Y+ I  
Sbjct: 98  QPALKALQSKYPGKDTESRQLMMAEQQALYKDAGVNPFASMLPLIVQMPVLIALYQSIYN 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S  +R +  + W++ L   DP                     I PI+ +L  F    +S 
Sbjct: 158 SQVLR-SGKFLWLQ-LGNNDPYY-------------------ILPILAALFTFASSWLST 196

Query: 510 PPADKGQAMILNWMPVVF-VFALSS---FPAGLIIYWSWSNVISIVQQAV------IMKM 559
                 Q  +   MP +F V    S    P+ L +YW   N+   +Q         I + 
Sbjct: 197 QAT-PEQNGMTKAMPYIFPVVIFFSAIAVPSALSLYWVVGNLFQTIQTFFLQNPFKIRRQ 255

Query: 560 HGAEIGLIDRLRSTFSKNYNS 580
              E+     ++    K   S
Sbjct: 256 RELELQKERDMKRKIKKAKRS 276


>gi|30684018|ref|NP_850125.1| ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane
           transporter [Arabidopsis thaliana]
 gi|330253079|gb|AEC08173.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
          Length = 348

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 18/208 (8%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++   +G AI+L T+ VK   +PL K+Q  ST  M+N+QPKI  +++++  +  + +Q  
Sbjct: 135 HVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLE 193

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470
             +LYK   +NPLAGC P L  IPV+  +Y+ +S  + E      + WI  L        
Sbjct: 194 TSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIAA 253

Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518
               + I  LF    G  P      +   + P+++  S ++ M++  PP   D  Q    
Sbjct: 254 RQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTL 313

Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWS 545
            +  ++P++  +   S P+GL IYW  S
Sbjct: 314 LVFKFLPLMIGYFALSVPSGLSIYWLVS 341


>gi|225867929|ref|YP_002743877.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701205|emb|CAW98134.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp.
           zooepidemicus]
          Length = 306

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 96/286 (33%), Gaps = 31/286 (10%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
           TN +         +      +            W Y      F++  +  +    +G+AI
Sbjct: 5   TNRILFSGLALSVLLTLTGCVGRDAKGHPEGIIWDYLGKPVSFLIDYFANSTALGYGLAI 64

Query: 365 MLTTVFVKLLF--------FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           ++ T+ V+ +         +  + +           +P    ++           Q  ++
Sbjct: 65  IVVTIIVRTIILPLGLYQSWKASYQSEKMAYLKPFFEPINQRIKNATSTEEKMAAQTELM 124

Query: 417 QLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
              + + +NPL   GC P+L+Q+P F A+Y  +  +                        
Sbjct: 125 AAQRENGVNPLGGIGCLPLLIQMPFFSAMYVAVQFT-------------------KGVST 165

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534
           + F  +       +   +   +  +  ++ M   P    +    +L  MP++ +      
Sbjct: 166 STFMGIDLGHRSVLLTAVIAALYFVQSWLSMMAVPEEQREQMKAMLYTMPIMMIVMSFYL 225

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           PAGL +YW      SI+QQ +    +  +  L  ++   F+KN   
Sbjct: 226 PAGLGLYWLVGGFFSIIQQLITT--YLLKPRLRKQIAEEFAKNPPK 269


>gi|110802031|ref|YP_699906.1| putative inner membrane protein translocase component YidC
           [Clostridium perfringens SM101]
 gi|110682532|gb|ABG85902.1| membrane protein OxaA [Clostridium perfringens SM101]
          Length = 238

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 12/219 (5%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
              F A   F+     + +   + I I L T+ V+L+  PL  KQ  S   M+ IQP+I 
Sbjct: 13  TMIFQAIHGFVASLDIFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIA 72

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L++K+K +P +  Q+ M++LYK +N+NP++GC P+L+Q+P+ FA+Y V     E++   
Sbjct: 73  KLQKKYKNNPEKA-QQEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFYGLGELKGVS 131

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + W+ DL A D T I  +      YL   +           + F Q +    P      
Sbjct: 132 -FLWLGDLWAPDRTFILPILSAATTYLSSLLM----------TKFTQSQTGGAPGGMNMN 180

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            +   M  +       FP+ L++YW   N+I +VQ   I
Sbjct: 181 TMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQTYFI 219


>gi|55822232|ref|YP_140673.1| OxaA-like protein precursor [Streptococcus thermophilus CNRZ1066]
 gi|55738217|gb|AAV61858.1| hypothetical protein, SpoIIIJ family protein [Streptococcus
           thermophilus CNRZ1066]
          Length = 305

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 103/255 (40%), Gaps = 31/255 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM----KN 391
           W W         ++  +  NL   FG+ I+  T+ V+ +  PL   Q  S A      + 
Sbjct: 36  WVWNLLGRPMSHVITYFANNLGLGFGLGIIFVTIIVRSIILPLGLHQSRSAAYQSAKREY 95

Query: 392 IQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           + P ++ + E+ + +  Q  +      ++Q  + + ++ +   GC P+L+Q P F A+Y 
Sbjct: 96  LAPILEPINERLRNAKTQEEKMAAQSELMQAQRENGLSLMGGIGCLPLLIQFPFFSALYY 155

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +     + W  +L   D                 F  + I   +     ++ +
Sbjct: 156 AARYTPGVL-KDDFLWF-NLGHRD-----------------FPLIIIIAALYYFQSWLSI 196

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           +  P    K  A  +  MP++ +F   S PA +I+YW    + SI+QQ +    +  +  
Sbjct: 197 QQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWLVGGIFSIIQQLITN--YIIKPR 254

Query: 566 LIDRLRSTFSKNYNS 580
           L +++   F KN   
Sbjct: 255 LKEKVAEEFKKNPPK 269


>gi|125623022|ref|YP_001031505.1| preprotein translocase subunit [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124491830|emb|CAL96750.1| preprotein translocase subunit [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300069769|gb|ADJ59169.1| preprotein translocase subunit [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 269

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 111/243 (45%), Gaps = 34/243 (13%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP--- 408
            F +  G  G+ I+L T+ ++    PL   Q  S+  M+ IQP+I +++ K+        
Sbjct: 46  RFLSFGGLTGVGIILFTIIIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKDMESR 105

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           +++ + + +LY  + +NP  GC P+++Q+PV +A+Y+ +S    ++H   + W + + A 
Sbjct: 106 RLMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKH-GTFLWFE-IGAK 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525
           DPT                    I PI+ ++  F+   +    A   +     +   MP+
Sbjct: 164 DPTF-------------------ILPILAAIFTFLSSYLMMKSAPERNAMTTSMTYIMPI 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAV------IMKMHGAEIGL-IDRLRSTFSKNY 578
             +    +F +G+ +YW  SN   + Q  +      I+    A++ +  D++++      
Sbjct: 205 FILIMGVNFASGIALYWVISNAFQVFQTMLLANPYKIIAAREAKVQVEKDKVKAREKALK 264

Query: 579 NSQ 581
            ++
Sbjct: 265 KAR 267


>gi|297592153|gb|ADI46937.1| ALB3_1m [Volvox carteri f. nagariensis]
          Length = 455

 Score =  115 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 24/235 (10%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++   +G +I+L T+ VK+L +PL K+Q  S   ++ ++P++D ++++F     + ++K 
Sbjct: 132 HVPYAYGYSIILLTLVVKILTYPLVKQQVESALAVQALKPRVDLIKDRFGDDTEK-IRKE 190

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRHAPFWGWIKDLAAADPTN 472
              LY+   +NPLAGC P L  IPVF  +Y  ++      +     + WI  LA      
Sbjct: 191 TSVLYEQAGVNPLAGCLPTLATIPVFIGLYTSLTNVANGGLLDTQGFYWIPSLAGPTTLA 250

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLS-MFI------------QMKMSPPPADK----- 514
                    +  P        PI    +  ++               ++ PP D      
Sbjct: 251 QRQSGLGTSWLFPFVDGAP--PIGWGAAATYLVLPVLLVLVQYVSSYLTNPPIDPNDENA 308

Query: 515 -GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
             Q ++L  +P++  +   + P+GL +Y+  + V+S  QQ  + K+ GA + + +
Sbjct: 309 SMQRILLLGLPLMIGWFALNVPSGLSLYYLSNTVLSAAQQVYLKKLGGARVSINE 363


>gi|116510957|ref|YP_808173.1| preprotein translocase subunit YidC [Lactococcus lactis subsp.
           cremoris SK11]
 gi|116106611|gb|ABJ71751.1| Preprotein translocase subunit YidC [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 269

 Score =  115 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 111/243 (45%), Gaps = 34/243 (13%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP--- 408
            F +  G  G+ I+L T+ ++    PL   Q  S+  M+ IQP+I +++ K+        
Sbjct: 46  RFLSFGGLTGVGIILFTIIIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKDMESR 105

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           +++ + + +LY  + +NP  GC P+++Q+PV +A+Y+ +S    ++H   + W + + A 
Sbjct: 106 RLMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKH-GTFLWFE-IGAK 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525
           DPT                    I PI+ ++  F+   +    A   +     +   MP+
Sbjct: 164 DPTF-------------------ILPILAAIFTFLSSYLMMKSAPERNAMTTSMTYIMPI 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAV------IMKMHGAEIGL-IDRLRSTFSKNY 578
             +    +F +G+ +YW  SN   + Q  +      I+    A++ +  D++++      
Sbjct: 205 FILIMGVNFASGIALYWVISNAFQVFQTMLLANPYKIIAAREAKVQVEKDKVKAREKALK 264

Query: 579 NSQ 581
            ++
Sbjct: 265 KAR 267


>gi|239622135|ref|ZP_04665166.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239515326|gb|EEQ55193.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 338

 Score =  115 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 22/217 (10%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAM 415
           +GIAIM   + +++   PL   Q  +   ++ +QP+I  ++ K+         + +Q+ +
Sbjct: 42  WGIAIMCLVLVIRICLLPLFLSQMRAMQRIQVLQPQIQRIQHKYAARKDPRSKEAMQREI 101

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRHAPFWGWIKDLAAAD--PT 471
           + L + +N NPL  C P L+Q P+  +++  +    ++   +A   G I    A D   +
Sbjct: 102 MALQQRYNANPLGSCLPSLIQAPILCSLFYTLQSLPAIADGNAEPLGGIDHTMAGDIESS 161

Query: 472 NIFTLFGILPF----YLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKG-------QA 517
           +IF +     F         + +G+   +M L++F    M        D         Q 
Sbjct: 162 SIFGVRIADSFGTVASPQSRIIIGVAVALMCLTLFAIQWMLIHRNTSKDAMVSPQFRVQK 221

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           M +   P ++V + ++ P G+++YW  +N+ ++ Q  
Sbjct: 222 MTVFVFPAIYVVSGATLPFGVLLYWLTNNLWNLGQTL 258


>gi|300811989|ref|ZP_07092445.1| putative stage III sporulation protein J [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
 gi|313124785|ref|YP_004035044.1| preprotein translocase subunit yidc [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
 gi|300497015|gb|EFK32081.1| putative stage III sporulation protein J [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
 gi|312281348|gb|ADQ62067.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
          Length = 289

 Score =  115 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 29/238 (12%)

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           P      +W   + +      ++       G++G AI++ TV ++++  PL   Q  ST 
Sbjct: 40  PISHNSSNWWDAWVVYYLSQFVLWIAKVCGGSYGWAIIIFTVIIRVILLPLNAVQINSTR 99

Query: 388 NMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
            M+ IQP++  L+EK+          L +   +LYK   +NP AGC P+++Q+PV +A+Y
Sbjct: 100 KMQEIQPELKALQEKYSSKDLETRNKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWALY 159

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           + I  + EM     + W+ DL   DP                     I PI+ ++  F+ 
Sbjct: 160 QAIWRTPEM-QNGKFLWM-DLGKPDPYY-------------------ILPILATVFTFLS 198

Query: 505 MKMS----PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             ++    P  +      ++   M ++       F + + +YW  SN+  + Q  V+ 
Sbjct: 199 SYIATLSVPKSSQTTMTKMMSYVMAIMVGIWAIVFQSAISLYWVISNLFQVGQTLVLQ 256


>gi|251781821|ref|YP_002996123.1| OxaA-like protein [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
 gi|242390450|dbj|BAH80909.1| OxaA-like protein precursor [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 307

 Score =  115 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 101/289 (34%), Gaps = 39/289 (13%)

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           N +         +      +            W +      + +  +  N    +G+AI+
Sbjct: 6   NRILFSGLALSILFTLTGCVGRDAHGNPKGMIWEFLGKPMSYFIDYFANNAGLGYGLAII 65

Query: 366 LTTVFVKLLF--------FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
           + T+ V+ L         +  + +           +P    +++   Q      Q  ++ 
Sbjct: 66  IVTIVVRTLILPLGLYQSWKASYQSEKMAFLKPVFEPINKRIKQASSQEEKMAAQTELMA 125

Query: 418 LYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
             + H INPL   GC P+L+Q+P F A+Y     +  +  + F G   DL +        
Sbjct: 126 AQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR------- 176

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFAL 531
                           +   I++   F Q  +S     + Q      ++  MP++ +   
Sbjct: 177 --------------SLVLTAIIAALYFFQSWLSMMAVSEEQREQMKAMMYTMPIMMIVMS 222

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            S PAG+ +YW      SI+QQ +    +  +  L  ++   ++KN   
Sbjct: 223 FSLPAGVGLYWLVGGFFSIIQQLITT--YILKPRLHKQIEEEYAKNPPK 269


>gi|104774817|ref|YP_619797.1| hypothetical protein Ldb2216 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116514946|ref|YP_813852.1| preprotein translocase subunit YidC [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|103423898|emb|CAI98940.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|116094261|gb|ABJ59414.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
          Length = 289

 Score =  115 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 29/233 (12%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
             +W   + +      ++       G++G AI++ TV ++++  PL   Q  ST  M+ I
Sbjct: 45  SSNWWDAWVVYYLSQFVLWIAKVCGGSYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEI 104

Query: 393 QPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           QP++  L+EK+          L +   +LYK   +NP AGC P+++Q+PV +A+Y+ I  
Sbjct: 105 QPELKALQEKYSSKDLETRNKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAIWR 164

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS- 508
           + EM     + W+ DL   DP                     I PI+ ++  F+   ++ 
Sbjct: 165 TPEM-QNGKFLWM-DLGKPDPYY-------------------ILPILATVFTFLSSYIAT 203

Query: 509 ---PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
              P  +      ++   M ++       F + + +YW  SN+  + Q  V+ 
Sbjct: 204 LSVPKSSQTTMTKMMSYVMAIMVGIWAIVFQSAISLYWVISNLFQVGQTLVLQ 256


>gi|326405712|gb|ADZ62783.1| preprotein translocase subunit YidC [Lactococcus lactis subsp.
           lactis CV56]
          Length = 269

 Score =  115 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 111/243 (45%), Gaps = 34/243 (13%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP--- 408
            F +  G  G+ I+L T+ ++    PL   Q  S+  M+ IQP+I +++ K+        
Sbjct: 46  RFLSFGGLTGVGIILFTIVIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKNMESR 105

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           +++ + + +LY  + +NP  GC P+++Q+PV +A+Y+ +S    ++H   + W + + A 
Sbjct: 106 RLMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKH-GTFLWFE-IGAK 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525
           DPT                    I PI+ ++  F+   +    A   +     +   MP+
Sbjct: 164 DPTF-------------------ILPILAAVFTFLSSYLMMKSAPERNAMTTSMTYIMPI 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAV------IMKMHGAEIGL-IDRLRSTFSKNY 578
             +    +F AG+ +YW  SN   + Q  +      I+    A++ +  D++++      
Sbjct: 205 FILIMGVNFAAGIALYWVISNAFQVFQTMLLANPYKIIAAREAKVQVEKDKIKAREKALK 264

Query: 579 NSQ 581
            ++
Sbjct: 265 KAR 267


>gi|182626422|ref|ZP_02954175.1| membrane protein OxaA [Clostridium perfringens D str. JGS1721]
 gi|177908296|gb|EDT70849.1| membrane protein OxaA [Clostridium perfringens D str. JGS1721]
          Length = 238

 Score =  115 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 12/219 (5%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
              F A   F+     + +   + I I L T+ V+L+  PL  KQ  S   M+ IQP+I 
Sbjct: 13  TMIFQAIHGFVASLDIFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIA 72

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L++K+K +P +  Q+ M++LYK +N+NP++GC P+L+Q+P+ FA+Y V     E++   
Sbjct: 73  KLQKKYKNNPEKA-QQEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFYGLGELKGVS 131

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + W+ DL A D T I  +      YL   +           + F Q +    P      
Sbjct: 132 -FLWLGDLWAPDRTFILPILSAATTYLSSLLM----------TKFTQSQAGGAPGGMNMN 180

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            +   M  +       FP+ L++YW   N+I +VQ   I
Sbjct: 181 TMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQTYFI 219


>gi|195978754|ref|YP_002123998.1| OxaA-like protein precursor [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|195975459|gb|ACG62985.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 306

 Score =  115 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 97/285 (34%), Gaps = 31/285 (10%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
           TN +         +      +            W Y      F++  +  +    +G+AI
Sbjct: 5   TNRILFSGLALSVLLTLTGCVGRDAKGHPEGIIWDYLGKPVSFLIDYFANSTALGYGLAI 64

Query: 365 MLTTVFVKLLF--------FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           ++ T+ V+ +         +  + +           +P    ++           Q  ++
Sbjct: 65  IVVTIIVRTIILPLGLYQSWKASYQSEKMAYLKPFFEPINQRIKNATSTEEKMAAQTELM 124

Query: 417 QLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
              + + +NPL   GC P+L+Q+P F A+Y  +  +   +                    
Sbjct: 125 AAQRENGVNPLGGIGCLPLLIQMPFFSAMYVAVQFT---KGVST---------------- 165

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534
           + F  +       +   +   +  +  ++ M   P    +    +L  MP++ +      
Sbjct: 166 STFMGIDLGHRSVLLTAVIAALYFVQSWLSMMAVPEEQREQMKAMLYTMPIMMIVMSFYL 225

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           PAGL +YW      SI+QQ +    +  +  L  ++   F+KN  
Sbjct: 226 PAGLGLYWLVGGFFSIIQQLITT--YLLKPRLRKQIAEEFAKNPP 268


>gi|227432921|ref|ZP_03914864.1| stage III sporulation protein J precursor [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
 gi|227351322|gb|EEJ41605.1| stage III sporulation protein J precursor [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
          Length = 278

 Score =  115 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 100/246 (40%), Gaps = 31/246 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W   +A     ++        N+G+ I+L T+F++ L  PL   Q  S   M+ +QP + 
Sbjct: 43  WSAIVAVFTRAILGASSWFGNNYGMGIILFTIFIRFLILPLMVYQVQSMMKMQVVQPALK 102

Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           EL+ K+        Q++      LYK   +NP A   P+++Q+P+  A+Y+ I  S  +R
Sbjct: 103 ELQAKYPGKDTESRQLMMAEQQALYKDAGVNPFASMLPLIVQMPILIALYQSIWNSPVLR 162

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
            +  + W++ L + DP                     I P++ +L  F    +S    + 
Sbjct: 163 -SGKFLWLQ-LGSNDPYF-------------------ILPVLAALFTFASSWLSMQS-NP 200

Query: 515 GQAMILNWMPVVFVFALSS----FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
            Q  +   MP +F   +       P+ L +YW   N    VQ   +   +  +I      
Sbjct: 201 DQNGMTKAMPYIFPVIIFFSAVAVPSALSLYWVVGNAFQTVQTFFLQ--NPFKIRREREA 258

Query: 571 RSTFSK 576
            +   K
Sbjct: 259 AAQLEK 264


>gi|332687274|ref|YP_004457048.1| inner membrane protein translocase component YidC [Melissococcus
           plutonius ATCC 35311]
 gi|332371283|dbj|BAK22239.1| inner membrane protein translocase component YidC, short form
           OxaI-like [Melissococcus plutonius ATCC 35311]
          Length = 275

 Score =  115 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 27/227 (11%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
            F +L  N GI I+  T+ ++++  PL   Q  S   M++IQP++ +L++K+    P+  
Sbjct: 49  QFLSLNRNIGIGIVFFTIVIRVILLPLMYFQTKSMRKMQDIQPQLKKLQQKYSSKDPETQ 108

Query: 412 Q---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           +       +LY  +N+NP AGC P+L+Q+P+  A+Y+ IS   E++    + W+  L   
Sbjct: 109 RLFRDEQQRLYTENNVNPYAGCLPLLVQMPILMALYQAISRIPELKQ-GNFMWLA-LNKP 166

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNW-MPV 525
           DP                     I PI+ ++  F    +S            I+N+ MPV
Sbjct: 167 DPY-------------------LILPILAAVFTFASTYLSNMSQLESNISLKIMNFFMPV 207

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           +         +GL +YW+ SN     Q  V+           +  + 
Sbjct: 208 MIFLMGIQLASGLSLYWTVSNAFQAGQTLVLNNPFKIRREREEEAKK 254


>gi|116619134|ref|YP_819505.1| preprotein translocase subunit YidC [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
 gi|116097981|gb|ABJ63132.1| Preprotein translocase subunit YidC [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 278

 Score =  115 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 100/246 (40%), Gaps = 31/246 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W   +A     ++        N+G+ I+L T+F++ L  PL   Q  S   M+ +QP + 
Sbjct: 43  WSAIVAVFTRAILGASSWFGNNYGMGIILFTIFIRFLILPLMVYQVQSMMKMQVVQPALK 102

Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           EL+ K+        Q++      LYK   +NP A   P+++Q+P+  A+Y+ I  S  +R
Sbjct: 103 ELQAKYPGKDTESRQLMMAEQQALYKDAGVNPFASMLPLIVQMPILIALYQSIWNSPVLR 162

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
            +  + W++ L + DP                     I P++ +L  F    +S    + 
Sbjct: 163 -SGKFLWLQ-LGSNDPYF-------------------ILPVLAALFTFASSWLSMQS-NP 200

Query: 515 GQAMILNWMPVVFVFALSS----FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
            Q  +   MP +F   +       P+ L +YW   N    VQ   +   +  +I      
Sbjct: 201 DQNGMTKAMPYIFPVIIFFSALAVPSALSLYWVVGNAFQTVQTFFLQ--NPFKIRREREA 258

Query: 571 RSTFSK 576
            +   K
Sbjct: 259 AAQLEK 264


>gi|293191008|ref|ZP_06609052.1| membrane protein OxaA [Actinomyces odontolyticus F0309]
 gi|292820695|gb|EFF79661.1| membrane protein OxaA [Actinomyces odontolyticus F0309]
          Length = 446

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 31/263 (11%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F   I + W +     + +L+         + ++I+L T+ V++   PL  KQ  S+  M
Sbjct: 9   FAWAISYVWVWI--HDLLVLLGMSSGSGMAWVLSIVLLTILVRIAIIPLFLKQIRSSRAM 66

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + IQP++ +++EK+K    QV ++ M++    L + H ++P A C P+L+Q+PV F +Y+
Sbjct: 67  QAIQPEMRKIQEKYKGKKDQVSRQKMMEETQALQRKHKVSPFASCLPMLVQMPVLFGMYR 126

Query: 446 VIS--ISLEMRHAPFWGWIKD----LAAADPTNIFTLFGIL---------PFYLPGFMHV 490
            I    S+      + G   D    L  +  T I     +           +  P  + V
Sbjct: 127 AIIAVSSISNGTYTYRGEATDHLGPLTESVSTEIVNSTVLGVPLSHTLRESWGQPTIVAV 186

Query: 491 GIWPI-IMSLSMFIQMKM----SPP-----PADKGQAMILNWMPVVFVFALSSFPAGLII 540
            I  I +M +  F+ M++    + P     P  + Q  ++  MP++F+F+ + F  G+++
Sbjct: 187 FIAAIVLMVVLQFVSMRLSFSRNMPDMGDNPMAQSQRSMMYVMPLMFIFSGAFFQMGVVV 246

Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563
           Y   ++  ++ Q    +K+    
Sbjct: 247 YTVTASFWALAQSLWTIKVMPTP 269


>gi|332143490|ref|YP_004429228.1| putative inner membrane protein translocase component YidC
           [Alteromonas macleodii str. 'Deep ecotype']
 gi|327553512|gb|AEB00231.1| putative inner membrane protein translocase component YidC
           [Alteromonas macleodii str. 'Deep ecotype']
          Length = 103

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 20/117 (17%)

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S+E+RHA F  WI DL+  DP                     + PI+   SM++  K+
Sbjct: 1   MESVELRHADFVLWITDLSTKDPYF-------------------VLPILTGASMYLLQKL 41

Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            P    D  Q  I+ WMPV        FPAGL++YW  SNVI++VQ  +I       
Sbjct: 42  QPTTITDPMQQKIMQWMPVAMSVFFLWFPAGLVLYWLVSNVITLVQAKMIYASMEKR 98


>gi|254556467|ref|YP_003062884.1| integral membrane protein [Lactobacillus plantarum JDM1]
 gi|300767190|ref|ZP_07077102.1| membrane protein [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308180409|ref|YP_003924537.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|254045394|gb|ACT62187.1| integral membrane protein [Lactobacillus plantarum JDM1]
 gi|300495009|gb|EFK30165.1| membrane protein [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308045900|gb|ADN98443.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 307

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 41/255 (16%)

Query: 339 FYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + ++AKP   +M +       N+G AI+  TV V+L+  P+   Q   +   +     + 
Sbjct: 37  YEYLAKPGQNVMEWLSQLFGNNYGWAIIGLTVIVRLVLLPMMINQQRKSTYQQEKMSAVR 96

Query: 398 ELREKFKQSPPQVLQKA--------MIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
              EK +        +         ++QLY+ + I+     GC P+L+Q+P+F A+Y  I
Sbjct: 97  PQMEKIQARQKAATTQEEKAAISNELMQLYRDNGISMTGGIGCLPLLIQLPIFSALYYAI 156

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S E+  A F G                       +       I  I+  LS   Q  +
Sbjct: 157 RYSPELSKATFMG-----------------------ISLGKSSLILAILAFLSYLAQGYL 193

Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           S     + Q   +  M    PV+ +F   S PAGL +Y+    + + +Q  +I       
Sbjct: 194 SMIGLPEEQKKTMRLMLIMSPVMILFVSMSAPAGLGLYFFVGGLFACLQTLIIN---FFR 250

Query: 564 IGLIDRLRSTFSKNY 578
             +   + +   K+ 
Sbjct: 251 PRIRREVEAELKKHP 265


>gi|313891402|ref|ZP_07825018.1| putative stage III sporulation protein J [Dialister microaerophilus
           UPII 345-E]
 gi|313120177|gb|EFR43353.1| putative stage III sporulation protein J [Dialister microaerophilus
           UPII 345-E]
          Length = 266

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 113/234 (48%), Gaps = 26/234 (11%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQY 383
            F++ +      ++A+ M   + + Y +       ++GIAI+  TV +K++  PLA KQ 
Sbjct: 3   DFQIPVLSTLVGYLAEIMRFCLQFCYGITQDLGYPSYGIAIIALTVIIKVILLPLAIKQI 62

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            S   M+ +QP++  +++K+K        + + +LY    ++PL+GC P+L+Q+P   AI
Sbjct: 63  KSMKGMQEVQPQLAAIQKKYKNDK-MRQSQEIQRLYAEKGVSPLSGCLPLLIQMPFLIAI 121

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           +  +       +   + W++ LA  DPT                    + P+I ++S +I
Sbjct: 122 FYALQGFPYDPNHASFLWLESLAVPDPTY-------------------VLPVISAVSTWI 162

Query: 504 QMKMSPPPADKGQAMILNWMPVV-FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             K +      GQ  ++  +  +   +    FP+GL+IYW  SN+   +QQ ++
Sbjct: 163 ISKQTSGANVAGQQKMMMMVMPLMIGYISVKFPSGLVIYWIVSNLFQGIQQTIM 216


>gi|227876537|ref|ZP_03994648.1| inner membrane protein translocase component YidC [Mobiluncus
           mulieris ATCC 35243]
 gi|227842851|gb|EEJ53049.1| inner membrane protein translocase component YidC [Mobiluncus
           mulieris ATCC 35243]
          Length = 445

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKA 414
            + ++I+  TVFV+LL  PL  KQ  +T  M   QP++  +++K+K    Q     +Q+ 
Sbjct: 51  GWVLSIVGLTVFVRLLLVPLFVKQIKATRAMSLAQPEMSAIQKKYKGKRDQQSMIRMQEE 110

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-----EMRHAPFWGWIKDLAAAD 469
              + + +  +  A C PIL Q+PVFFA+Y+++          +      G +  + A D
Sbjct: 111 TRAVQRKYGASMSASCLPILFQMPVFFALYRLLYNMKPIADGVLPGHDSIGGMGQVQAQD 170

Query: 470 ---PTNIFTLFGILPFYLPGFMHVGIWPIIMSL----SMFIQMK-MSPPPADKGQ----- 516
               T      G+  F     M   I   IM      SM  Q   ++     + Q     
Sbjct: 171 LWHSTFFGQSLGLTMFGPGSVMSTKIVVGIMVAYLVLSMLFQTAFLTMKNMSQEQLNSDN 230

Query: 517 ------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                   ++  MP++++F       GL++YW  SN   I+QQ  IM+     
Sbjct: 231 PMVKSTKSMMYLMPLMYLFTGPVVQVGLLVYWVTSNTWMILQQFFIMRAFPTR 283


>gi|28378260|ref|NP_785152.1| integral membrane protein [Lactobacillus plantarum WCFS1]
 gi|38502980|sp|Q88WR8|OXAA2_LACPL RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|28271095|emb|CAD64000.1| integral membrane protein [Lactobacillus plantarum WCFS1]
          Length = 307

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 41/255 (16%)

Query: 339 FYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + ++AKP   +M +       N+G AI+  TV V+L+  P+   Q   +   +     + 
Sbjct: 37  YEYLAKPGQNVMEWLSQLFGNNYGWAIIGLTVIVRLVLLPMMINQQRKSTYQQEKMSAVR 96

Query: 398 ELREKFKQSPPQVLQKA--------MIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
              EK +        +         ++QLY+ + I+     GC P+L+Q+P+F A+Y  I
Sbjct: 97  PQMEKIQARQKAATTQEEKAAISNELMQLYRDNGISMTGGIGCLPLLIQLPIFSALYYAI 156

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S E+  A F G                       +       I  I+  LS   Q  +
Sbjct: 157 RYSPELSKATFMG-----------------------ISLGKSSLILAILAFLSYLAQGYL 193

Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           S     + Q   +  M    PV+ +F   S PAGL +Y+    + + +Q  +I       
Sbjct: 194 SMIGLPEEQKKTMRLMLIMSPVMILFVSMSAPAGLGLYFFVGGLFACLQTLIIN---FFR 250

Query: 564 IGLIDRLRSTFSKNY 578
             +   + +   K+ 
Sbjct: 251 PRIRREVEAELKKHP 265


>gi|323705845|ref|ZP_08117417.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323534841|gb|EGB24620.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 218

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 60/217 (27%), Positives = 111/217 (51%), Gaps = 23/217 (10%)

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           I   +  L+ + Y+ VGN+G+AI++ T+ ++++  P   +Q  +   MK I P ++E+++
Sbjct: 4   IGMYLGQLLKFIYDFVGNYGVAIIIFTILIRVILLPFYVQQMGTMRKMKEISPLVEEIKK 63

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           K+ +  PQ + + M++LYK  N+NP++GC P+LL + + + ++ ++        A  + W
Sbjct: 64  KYAK-DPQKMNEEMMKLYKEKNVNPMSGCLPMLLPLIILWPLFAMLRSYPAFSTAS-FLW 121

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
           +K LA  DP                     I PI+  ++ +I   M     D  Q  +  
Sbjct: 122 LKSLAEKDPYF-------------------ILPILSGVTTYISSAM--IQTDNNQKSMNL 160

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            M    ++   S PAG+ IYW  SN+  IVQQ + ++
Sbjct: 161 IMSAFMIWITVSLPAGVGIYWVTSNIFQIVQQYIFLR 197


>gi|206901409|ref|YP_002251654.1| sporulation associated-membrane protein [Dictyoglomus thermophilum
           H-6-12]
 gi|206740512|gb|ACI19570.1| sporulation associated-membrane protein [Dictyoglomus thermophilum
           H-6-12]
          Length = 209

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 29/230 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
               +A  +  ++  FY L GN+G+AI+   + V+++ +PL   Q  S    + IQP+I 
Sbjct: 1   MINALANGLGYILELFYKLTGNYGVAIIFLVILVRIILYPLTHAQLKSLFMQQKIQPEIK 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +++EKFK   P+ + K ++ LY+ + INP+ GC P+L+Q P+  A+Y+++    +    P
Sbjct: 61  KIQEKFKD-DPKEMNKQIMLLYQQYKINPMMGCLPLLIQFPILIALYQLLLH-YKYAVTP 118

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADK 514
            + WI DL   D                      I  I+M+L  +   ++S     P  K
Sbjct: 119 KFLWISDLTKPD---------------------YILLIVMALVTYFSGELSSLASSPEQK 157

Query: 515 GQAMILNWMPVVFV---FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            Q  I+N    +     F L   PAG+++YW  S++  ++QQ ++ ++H 
Sbjct: 158 SQQRIMNIFTTMLFTGMFLLYKVPAGVMLYWLVSSLFQLLQQVIVFRLHK 207


>gi|168214845|ref|ZP_02640470.1| membrane protein OxaA [Clostridium perfringens CPE str. F4969]
 gi|169343448|ref|ZP_02864448.1| membrane protein OxaA [Clostridium perfringens C str. JGS1495]
 gi|169298400|gb|EDS80489.1| membrane protein OxaA [Clostridium perfringens C str. JGS1495]
 gi|170713745|gb|EDT25927.1| membrane protein OxaA [Clostridium perfringens CPE str. F4969]
          Length = 238

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 12/219 (5%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
              F A   F+     + +   + I I L T+ V+L+  PL  KQ  S   M+ IQP+I 
Sbjct: 13  TMIFQAIHGFVASLDIFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIA 72

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L++K+K +P +  Q+ M++LYK +N+NP++GC P+L+Q+P+ FA+Y V +   E++   
Sbjct: 73  KLQKKYKNNPEKA-QQEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFTGLAELKGVS 131

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + W+ DL A D T I  +      YL   +           + F Q +    P      
Sbjct: 132 -FLWLGDLWAPDRTFILPILSAATTYLSSLLM----------TKFTQSQAGGAPGGMNMN 180

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            +   M  +       FP+ L++YW   N+I +VQ   I
Sbjct: 181 TMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQTYFI 219


>gi|325685110|gb|EGD27241.1| ParB/SpoJ family partitioning protein [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 289

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 29/239 (12%)

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
           +P      +W   + +      ++       G++G AI++ TV ++++  PL   Q  ST
Sbjct: 39  MPISHNSSNWWDAWVVYYLSQFVLWIAKVCGGSYGWAIIIFTVIIRVILLPLNAVQINST 98

Query: 387 ANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
             M+ IQP++  L+EK+          L +   +LYK   +NP AGC P+++Q+PV +A+
Sbjct: 99  RKMQEIQPELKALQEKYSSKDLETRNKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWAL 158

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           Y+ I  + EM     + W+ DL   DP                     I PI+ ++  F+
Sbjct: 159 YQAIWRTPEM-QNGKFLWM-DLGKPDPYY-------------------ILPILATVFTFL 197

Query: 504 QMKMS----PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
              ++    P  +      ++   M ++       F + + +YW  SN+  + Q  V+ 
Sbjct: 198 SSYIATLSVPKSSQTTMTKMMSYVMAIMVGIWAIVFQSAISLYWVISNLFQVGQTLVLQ 256


>gi|238478612|ref|NP_001154364.1| ALB4 (ALBINA 4) [Arabidopsis thaliana]
 gi|332192419|gb|AEE30540.1| ALBINO3-like protein 1 [Arabidopsis thaliana]
          Length = 462

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 20/228 (8%)

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432
           +  +     +  S   MK++ P+I  ++E++     ++      +LYK   INPLAGC P
Sbjct: 100 IANYMETILKVESAMAMKSLTPQIKAIQERYAGDQEKIQL-ETARLYKLAGINPLAGCLP 158

Query: 433 ILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GIL 480
            L  IPV+  +Y+ +S  + E      + WI  LA           + I  LF    G  
Sbjct: 159 TLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFIEGHP 218

Query: 481 PFYLPGFMHVGIWPIIMSLSMF--IQMKMSPPPADKGQ---AMILNWMPVVFVFALSSFP 535
           P   P  +   + P+++  S +  IQ+  S    D        +   +P++  +   S P
Sbjct: 219 PLGWPDTLAYLVLPLLLVFSQYLSIQIMQSSQSNDPAMKSSQAVTKLLPLMIGYFALSVP 278

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE--IGLIDRLRSTFSKNYNSQ 581
           +GL +YW  +N++S  QQ  + K  GA+  +     L +   K    +
Sbjct: 279 SGLSLYWLTNNILSTAQQVWLQKYGGAKNPVEKFTNLVTKEDKTQQIE 326


>gi|154508234|ref|ZP_02043876.1| hypothetical protein ACTODO_00728 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797868|gb|EDN80288.1| hypothetical protein ACTODO_00728 [Actinomyces odontolyticus ATCC
           17982]
          Length = 446

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 122/263 (46%), Gaps = 31/263 (11%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F   I + W +     + +L+         + ++I+L T+ V++   PL  KQ  S+  M
Sbjct: 9   FAWAISYVWVWI--HDLLVLLGMSSGSGMAWVLSIVLLTILVRIAIIPLFLKQIRSSRAM 66

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + IQP++ +++EK+K    QV ++ M++    L + H ++P A C P+L+Q+PV F +Y+
Sbjct: 67  QAIQPEMRKIQEKYKGKKDQVSRQKMMEETQALQRKHKVSPFASCLPMLVQMPVLFGMYR 126

Query: 446 VIS--ISLEMRHAPFWGWIKD----LAAADPTNIFTLFGIL---------PFYLPGFMHV 490
            I    S+      + G   D    L  +  T I     +           +  P  + V
Sbjct: 127 AIIAVSSISNGTYTYRGEATDHLGPLTESVSTEIVNSTVLGVPLSHTLRESWGQPTIVAV 186

Query: 491 GIWPI-IMSLSMFIQMKM----SPP-----PADKGQAMILNWMPVVFVFALSSFPAGLII 540
            I  I +M +  F+ M++    + P     P  + Q  ++  MP++F+F+ + F  G++I
Sbjct: 187 FIAAIVLMVVLQFVSMRLSFSRNMPDMGDNPMAQSQRSMMYVMPLMFIFSGAFFQMGVVI 246

Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563
           Y   ++  ++ Q    +K+    
Sbjct: 247 YTVTASFWALAQSLWTIKVMPTP 269


>gi|226362891|ref|YP_002780671.1| inner membrane protein translocase component YidC [Rhodococcus
           opacus B4]
 gi|226241378|dbj|BAH51726.1| putative OxaA family protein [Rhodococcus opacus B4]
          Length = 367

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 57/282 (20%), Positives = 104/282 (36%), Gaps = 48/282 (17%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            F      G  +   K    +     +    + ++++     ++ + +    KQ  +T  
Sbjct: 3   DFIYYPVSGILWVWHKVFGAIPFLGPDSGITWALSVVFLVFTLRAVLYKPFVKQVRTTRQ 62

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QP+I  L++K+     Q     M +L K H  NP+ GC P+L Q PVF  ++ V+ 
Sbjct: 63  MQELQPQIKALQKKYSG-DRQRQAVEMQKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVLR 121

Query: 449 I--------------------------SLE---------MRHAPFWGWIKDLAAADPTNI 473
                                      S+E         +  AP   WI    A    + 
Sbjct: 122 SFNRTGTGIGQLGMSVEANANTPNYFFSVEDVQSFLSARLFGAPISAWITMPKAQ--LDA 179

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-----MSPPPADKGQAMILN-----WM 523
           F  +G +P  L   +      II S++     +      SP  A   Q+ I+N       
Sbjct: 180 FAAYGPIPTVLNIAVVAVPLMIIASIATHFNSRASVARQSPEAAANPQSAIMNKLALWVF 239

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           P+  +      P  +++YW  +N+ +  QQ ++ +   AE  
Sbjct: 240 PLGVLVGGPFLPIAILLYWVSNNIWTYGQQHIVFRRIDAEEE 281


>gi|206896386|ref|YP_002247364.1| membrane protein OxaA 1 [Coprothermobacter proteolyticus DSM 5265]
 gi|206739003|gb|ACI18081.1| membrane protein OxaA 1 [Coprothermobacter proteolyticus DSM 5265]
          Length = 221

 Score =  114 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 26/227 (11%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
               I+    M++++ Y++V N+ + I+L T+ +KL+  PL  +Q  ++  +  IQ ++ 
Sbjct: 1   MVQSISNFFSMILNWLYSVVPNYPVDIILMTILLKLILEPLTYQQLRTSFVISRIQGELQ 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           E+ +K+K  P Q   +   ++YK H +NPL GC   LLQIP+FF +Y  +  +   +  P
Sbjct: 61  EIAKKYKNDPQQA-AQEQSKIYKEHGVNPLIGCLLPLLQIPIFFGLYGSLVQNPNFKGLP 119

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPA 512
            + W+ D++  DPT                    I  I M +  + Q K +      P  
Sbjct: 120 -FLWVPDISKPDPTW-------------------ITVIAMVVVTYFQFKFTSQATTDPAM 159

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            + Q M++    ++  +   SFP G+ +YW   ++ISI++  +I KM
Sbjct: 160 QRQQNMMMWIFVIMIGWIARSFPFGVALYWMAFSLISILESFIIRKM 206


>gi|323126634|gb|ADX23931.1| OxaA-like protein precursor [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 307

 Score =  114 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 101/289 (34%), Gaps = 39/289 (13%)

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           N +         +      +            W +      + +  +  N    +G+AI+
Sbjct: 6   NRILFSGLALSILFTLTGCVGRDAHGNPKGMIWEFLGKPMSYFIDYFANNAGLGYGLAII 65

Query: 366 LTTVFVKLLF--------FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
           + T+ V+ L         +  + +           +P    +++   Q      Q  ++ 
Sbjct: 66  IVTIVVRTLILPLGLYQSWKASYQSEKMAFLKPVFEPINKRIKQASSQEEKMAAQTELMA 125

Query: 418 LYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
             + H INPL   GC P+L+Q+P F A+Y     +  +  + F G   DL +        
Sbjct: 126 AQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQYTKGVSISTFMG--IDLGSR------- 176

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFAL 531
                           +   I++   F Q  +S     + Q      ++  MP++ +   
Sbjct: 177 --------------SLVLTAIIAALYFFQSWLSMMAVSEEQREQMKAMMYTMPIMMIVMS 222

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            S PAG+ +YW      SI+QQ +    +  +  L  ++   ++KN   
Sbjct: 223 FSLPAGVGLYWLVGGFFSIIQQLITT--YILKPRLHKQIEEEYAKNPPK 269


>gi|110801038|ref|YP_697348.1| putative inner membrane protein translocase component YidC
           [Clostridium perfringens ATCC 13124]
 gi|168211555|ref|ZP_02637180.1| membrane protein OxaA [Clostridium perfringens B str. ATCC 3626]
 gi|110675685|gb|ABG84672.1| membrane protein OxaA [Clostridium perfringens ATCC 13124]
 gi|170710464|gb|EDT22646.1| membrane protein OxaA [Clostridium perfringens B str. ATCC 3626]
          Length = 238

 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 66/238 (27%), Positives = 113/238 (47%), Gaps = 16/238 (6%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
              F A   F+     + +   + I I L T+ V+L+  PL  KQ  S   M+ IQP+I 
Sbjct: 13  TMIFQAIHGFVASLDIFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIA 72

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L++K+K +P +  Q+ M++LYK +N+NP++GC P+L+Q+P+ FA+Y V +   E++   
Sbjct: 73  KLQKKYKNNPEKA-QQEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFTGLTELQGVS 131

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + W+ DL A D T I  +      YL   +           + F Q +    P      
Sbjct: 132 -FLWLGDLWAPDRTFILPILSAATTYLSSLLM----------TKFTQSQAGGAPGGMNMN 180

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM----KMHGAEIGLIDRLR 571
            +   M  +       FP+ L++YW   N+I +VQ   I+    +    E      ++
Sbjct: 181 TMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQTYFIVVLPSRKRAKEKEQYKDIK 238


>gi|56965671|ref|YP_177405.1| stage III sporulation protein J [Bacillus clausii KSM-K16]
 gi|56911917|dbj|BAD66444.1| stage III sporulation protein J [Bacillus clausii KSM-K16]
          Length = 265

 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 39/262 (14%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
           +   P       +   +F+    F++  +     G+FG  I++ T+ ++LL  PLA K  
Sbjct: 23  NTNEPITAESTGFWNSFFVYPMSFLITFFSDLTGGHFGWGIIIVTILIRLLILPLALKSQ 82

Query: 384 VSTANMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438
            ST  M+ ++P++ E++EK K+        + +Q  M+ LY+ H +NP AGC P L+QIP
Sbjct: 83  KSTRAMQVLRPEMQEIQEKMKKAQGNPEKQREVQAEMLSLYQKHGVNPAAGCLPALVQIP 142

Query: 439 VFFAIYKVISISLEM--RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           +  A+Y  I  + E+    A  + W  +L + D                      I P+I
Sbjct: 143 IVMALYFAIMRTEEIGVGPASAFLWF-NLGSPD---------------------YILPVI 180

Query: 497 MSLSMFIQMKMSPPPA--------DKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNV 547
             ++ F+Q KMS                  I+ + MPV+ V A  + P+ L +YW   N+
Sbjct: 181 AGITTFVQFKMSMSQMPANPLGEGMPNPMNIMLYIMPVMIVIAGITLPSALALYWVVGNL 240

Query: 548 ISIVQQAVIM-KMHGAEIGLID 568
             IVQ   I+ + +  +  +  
Sbjct: 241 FMIVQTYFIIVRPNMTKEEVQK 262


>gi|307243391|ref|ZP_07525548.1| stage III sporulation protein J family protein [Peptostreptococcus
           stomatis DSM 17678]
 gi|306493201|gb|EFM65197.1| stage III sporulation protein J family protein [Peptostreptococcus
           stomatis DSM 17678]
          Length = 233

 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              IA    + +   Y ++GN+G++I++ T+ VK++  PL  KQ  ST  M  I PK+ E
Sbjct: 1   MGQIASLFGIALKAIYGVIGNYGLSIIVFTIIVKMILMPLTVKQTKSTFAMSEINPKVKE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL------- 451
           ++ K+K   P+   + + +LYK   INPL+GC PIL+Q+P+   ++ V    +       
Sbjct: 61  IQAKYKN-KPEKQNEEISKLYKESGINPLSGCLPILIQMPILMGLFYVFKDPVTHGVFAS 119

Query: 452 ---EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-M 507
                     + WIK L+  D                      I  +   +S ++  K M
Sbjct: 120 KAAMAAANGNFLWIKALSKPD---------------------YILAVFSGVSAYLMQKVM 158

Query: 508 SPPPADKGQAMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           +P    +G   +++W+   + ++    FPA L +YW  SN+ S+ Q  +I +   +++  
Sbjct: 159 TPKDQIEGPMKMMSWLLAGMSLYWGFIFPAALTLYWGVSNIFSVFQYYLITRPLKSKLEQ 218

Query: 567 ----IDRLRSTFSKN 577
                +  +S+F K 
Sbjct: 219 EKADKEAGKSSFKKK 233


>gi|20809127|ref|NP_624298.1| preprotein translocase subunit YidC [Thermoanaerobacter
           tengcongensis MB4]
 gi|38503074|sp|Q8R6K6|OXAA_THETN RecName: Full=Membrane protein oxaA
 gi|20517807|gb|AAM25902.1| Preprotein translocase subunit YidC [Thermoanaerobacter
           tengcongensis MB4]
          Length = 206

 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 23/220 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              IA  +  L+ + ++ VGN+G+AI++ TVF+++L  P   +Q      MK IQP ++E
Sbjct: 1   MATIAMYLGQLLEFIHHYVGNYGVAIIVFTVFIRILLLPFYIQQMAMMKKMKEIQPLVEE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L++K+    PQ L    ++LY+   INP  GC P+LL + + + ++ ++        A  
Sbjct: 61  LKKKY-GKDPQKLNMETMKLYQEKKINPFGGCLPMLLPLIILWPLFTMLRTYPAFSTAS- 118

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W+  LA  DP                     I PI+ +++ +I   M     DK Q  
Sbjct: 119 FLWMHSLAERDPYY-------------------IIPILATVTTYISSAM--VATDKSQNS 157

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +   M +   +   + PAG+ IYW  SN+  IVQQ + M+
Sbjct: 158 MNIMMSLFMGWITVTLPAGVGIYWVTSNIFQIVQQYIFMR 197


>gi|167770830|ref|ZP_02442883.1| hypothetical protein ANACOL_02183 [Anaerotruncus colihominis DSM
           17241]
 gi|167666870|gb|EDS11000.1| hypothetical protein ANACOL_02183 [Anaerotruncus colihominis DSM
           17241]
          Length = 355

 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 56/278 (20%), Positives = 115/278 (41%), Gaps = 53/278 (19%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     P+  +M   + ++  +G+A++L T+ V++   PL+ KQ  S   M+  +P+++E
Sbjct: 5   YTIFGYPLGWIMWACFKVLPIYGVALVLFTLIVRVCLVPLSIKQQKSMVKMQIFRPRMEE 64

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRH- 455
           +++K+  +  ++  + M++LY+  + NP +GC P+L+Q+P+ F +Y VI   +   +R  
Sbjct: 65  IQKKYANNREKM-NEEMMKLYEEEHYNPASGCLPMLIQMPILFGLYDVIQRPITHLLRIS 123

Query: 456 ----------APFWGWIKDLAA---------------ADPTNIFTLF-----------GI 479
                     A       +LA                 D  +    F           G 
Sbjct: 124 GPVIDQATEIAATVLNNANLAKDYSRQIRIIDAVNTNPDAFSGLGDFVSKVQTLDLSIGP 183

Query: 480 LPFYLPGFMHVGIWPIIMSLSM-------FIQMKM------SPPPADKGQAMILNWMPVV 526
           +         + +  +I   S        F+ M+       +   A      ++  MP++
Sbjct: 184 IDLTQQPTFALNLLILIPIFSFLTSLLVSFVSMRQTADMSGNAAAAAGMSKSMMIMMPLM 243

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
             +     PAGL +YW  SN++  VQ  ++ K    + 
Sbjct: 244 SAWISFVVPAGLGVYWIISNILMAVQTYLLNKFMNPKE 281


>gi|226355228|ref|YP_002784968.1| 60 kDa inner membrane insertion protein [Deinococcus deserti
           VCD115]
 gi|226317218|gb|ACO45214.1| putative 60 kDa inner membrane insertion protein, Membrane protein
           OxaA [Deinococcus deserti VCD115]
          Length = 542

 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 93/495 (18%), Positives = 171/495 (34%), Gaps = 61/495 (12%)

Query: 74  KNPSLIGSINLKGAQFDDLNLRGY------HLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127
            +       N +G       ++ Y                  L +  +  N        V
Sbjct: 53  TSNLQDVVFNARGEVI-GWYVKNYAGTPFIKRRSDGTYDFSALKNGKSIINMVGTRKSLV 111

Query: 128 STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVT 187
             A+ ++     TV        L       +       I   +T++L        V T  
Sbjct: 112 VQADGLDPAQPATVTTPKVTSDLPKNRQDAVFRYTQGGITVTKTVTLHPRNYKMDVRTSV 171

Query: 188 NNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE 247
               +Q      G      P+        +       G   +   +Y+ +++        
Sbjct: 172 EGGPEQYTLLFPGLGNAENPRVQALPASGEPAAAQGSGTLEVENIQYAALQEVP------ 225

Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307
                G++ +   +  +  +     +            Q +   +    + G      + 
Sbjct: 226 ----SGMNSQVALATIVRPQ-QGTRADVALTGGRQGLIQVRLEGDSSLEVYGGRNELIHL 280

Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367
             +G  E P +                   +F  I+  +  LM   Y  +GN+G+ ++  
Sbjct: 281 YQSGYTELPGLFEPN---------------FFGKISLMIVKLMESLYKFIGNWGLVLVAL 325

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHN 423
           T+ ++L+ +PL + Q  +TA M+ +QPKI E++EK+K          +Q  M QLY+ +N
Sbjct: 326 TLLLRLIMWPLMQAQGRTTARMQIMQPKIKEIQEKYKDKRDMESQRAMQSEMQQLYRDYN 385

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
            NP  GC+  LL  PV  A++  I    E      + W+ DLA  DP  I  L  ++   
Sbjct: 386 FNPA-GCFSTLLPFPVLIALWSTIRN-FEF--DSGFLWLPDLAIPDPFYILALIYLVVNI 441

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
              ++     P      MF Q                 ++ ++F++   +FPAG+ IY  
Sbjct: 442 GQLYVMTRKTP-----DMFKQQ---------------AFIYLIFLYFALTFPAGVTIYII 481

Query: 544 WSNVISIVQQAVIMK 558
            S +I I+QQ +I K
Sbjct: 482 LSTLIGIIQQVIINK 496


>gi|325126646|gb|ADY85976.1| Stage III sporulation protein J [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 289

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 29/233 (12%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
             +W   + +      ++       G++G AI++ TV ++++  PL   Q  ST  M+ I
Sbjct: 45  SSNWWDAWVVYYLSQFVLWIAKVCGGSYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEI 104

Query: 393 QPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           QP++  L+EK+          L +   +LYK   +NP AGC P+++Q+PV +A+Y+ I  
Sbjct: 105 QPELKALQEKYSSKDLETRNKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAIWR 164

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS- 508
           + EM     + W+ DL   DP                     I PI+ ++  F+   ++ 
Sbjct: 165 TPEM-QNGKFLWM-DLGKPDPYY-------------------ILPILATVFTFLSSYIAT 203

Query: 509 ---PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
              P  +      ++   M ++       F + + +YW  SN+  + Q  V+ 
Sbjct: 204 LSVPKSSQTTMTKMMSYVMAIMVGIWAIVFQSAIPLYWVISNLFQVGQTLVLQ 256


>gi|157311737|ref|NP_001098600.1| mitochondrial inner membrane protein OXA1L [Danio rerio]
 gi|156230848|gb|AAI52010.1| Oxa1l protein [Danio rerio]
          Length = 469

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 95/295 (32%), Gaps = 42/295 (14%)

Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGA-KEFPTIHHYEKDLAIPRFEMLI 334
               D      A   A  +   P  +   T  +          +     + ++    +  
Sbjct: 94  SEPPDAAISAPASIPAPAVDPTPSVTPPITEQVAEAPLTALDVLQGVGAEASLSELGL-- 151

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
                      +  L+ + +  +G      I+  T+  +   FP+  K     A + N+ 
Sbjct: 152 ---CNSTPVGLIQNLLEFMHVSIGLPWWGAIVAGTIVARCAVFPVIVKGQREAAKLNNVM 208

Query: 394 PKIDELREKFKQSPPQVLQKAM-------IQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
           P++ +L  +  ++     +          +   K  ++NP  G    L+Q P+F + +  
Sbjct: 209 PEMTKLTNRMNEAKQSGNKFEFSKAYTDLMMFQKKKDVNPFRGFLVPLVQAPIFLSFFIA 268

Query: 447 ISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           +    E+           W  DL AADP                     I PI ++ +M 
Sbjct: 269 LRKMSELPVPSLQTGGLWWFTDLTAADPFY-------------------ILPIAVTGTMV 309

Query: 503 IQMKMSPPPA--DK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
             +++       +        +   MP V +    +FP  +  YW  SN+ S+ Q
Sbjct: 310 AILELGAESGVDNPNLRAMKTVFRIMPFVILPLTINFPTAVFTYWMTSNLFSLAQ 364


>gi|295111773|emb|CBL28523.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
           [Synergistetes bacterium SGP1]
          Length = 259

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 60/244 (24%), Positives = 113/244 (46%), Gaps = 27/244 (11%)

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
             L+   Y +  ++G+AI+L TV V++   PL +KQ VS   M+ +QP+I  L+ K+   
Sbjct: 1   MWLLETLYGVTNSWGLAIILLTVIVRIAMHPLTQKQMVSMQRMQKLQPRIKVLQNKYGDD 60

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---------SLEMRHAP 457
               L + M+ LYK   I+P AGC P+L+Q+P+F  +Y+V+           ++ +  + 
Sbjct: 61  KET-LNREMMALYKEEKISPAAGCLPLLIQLPIFILLYRVLYNNDFAGATFLTVHLDGSV 119

Query: 458 FWGWIKDLAAADP----------------TNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501
                  L   D                  + FT   +L   +  ++   I  I+++   
Sbjct: 120 LTTMADALNLVDKAGVPIPRDQLGVVMVFFSSFTNLPLLFSNVGMWLPNMILLILIAFLT 179

Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           + Q  +S    +   AM+  +MP++  F       G+++YW  S+++ +V Q  +M+   
Sbjct: 180 WYQQHLSSA-GNPQMAMMSWFMPLLLTFICIGLQGGVLLYWGVSSLMGVVHQLRVMRKTD 238

Query: 562 AEIG 565
            E+ 
Sbjct: 239 EEMR 242


>gi|327285652|ref|XP_003227547.1| PREDICTED: mitochondrial inner membrane protein OXA1L-like [Anolis
           carolinensis]
          Length = 421

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 93/268 (34%), Gaps = 36/268 (13%)

Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361
            T             ++   +   A+            +     +  L+   +  VG   
Sbjct: 74  GTQVVQPIVSPPIEASLPTADLGQAVQELSFAELGLGAHTPVGLIQNLLECLHVDVGLPW 133

Query: 362 IA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ--- 417
              I+  TV  + L FPL  K       + N  P+I +L  +  ++     +    +   
Sbjct: 134 WGAIVAGTVVARCLVFPLIVKGQREAVKLNNHLPQITQLTTRMNEAKQSGNKFEFAKAYS 193

Query: 418 ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAAD 469
                 KTHN+NPL G    L+Q P+F + +  +    E+           W  DL AAD
Sbjct: 194 DLALYQKTHNVNPLRGFLVPLVQAPIFISFFIALRKMAELPVPSMQTGGLWWFADLTAAD 253

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKG---QAMILNWMP 524
           P                     I P+ ++++M+  +++       +        +   MP
Sbjct: 254 PYY-------------------ILPLAVTVTMWAILELGAESGVSNPNLRVMKTVFRVMP 294

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +  +    SFP  +  YW  SN+ S+VQ
Sbjct: 295 IAILPLTISFPTAIFTYWMTSNLFSLVQ 322


>gi|18311639|ref|NP_563573.1| putative inner membrane protein translocase component YidC
           [Clostridium perfringens str. 13]
 gi|168207740|ref|ZP_02633745.1| membrane protein OxaA [Clostridium perfringens E str. JGS1987]
 gi|168218053|ref|ZP_02643678.1| membrane protein OxaA [Clostridium perfringens NCTC 8239]
 gi|38503106|sp|Q8XH28|OXAA_CLOPE RecName: Full=Membrane protein oxaA
 gi|18146323|dbj|BAB82363.1| stage III sporulation protein J [Clostridium perfringens str. 13]
 gi|170660941|gb|EDT13624.1| membrane protein OxaA [Clostridium perfringens E str. JGS1987]
 gi|182379924|gb|EDT77403.1| membrane protein OxaA [Clostridium perfringens NCTC 8239]
          Length = 238

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 12/219 (5%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
              F A   F+     + +   + I I L T+ V+L+  PL  KQ  S   M+ IQP+I 
Sbjct: 13  TMIFQAIHGFVASLDIFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIA 72

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L++K+K +P +  Q+ M++LYK +N+NP++GC P+L+Q+P+ FA+Y V +   E++   
Sbjct: 73  KLQKKYKNNPEKA-QQEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFTGLTELQGVS 131

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + W+ DL A D T I  +      YL   +           + F Q +    P      
Sbjct: 132 -FLWLGDLWAPDRTFILPILSAATTYLSSLLM----------TKFTQSQAGGAPGGMNMN 180

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            +   M  +       FP+ L++YW   N+I +VQ   I
Sbjct: 181 TMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQTYFI 219


>gi|258512905|ref|YP_003186339.1| membrane protein insertase, YidC/Oxa1 family [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257479631|gb|ACV59950.1| membrane protein insertase, YidC/Oxa1 family [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 344

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 24/223 (10%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
               +  I   +  LM YF +L GN +GI+I+   + V+L+  PL  +Q      M  +Q
Sbjct: 37  PKNAWGSILHGISDLMDYFAHLFGNDYGISILFMAILVRLVVLPLFLRQIRFQRAMVKLQ 96

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P+I ++R K+ +   Q +Q+ +++LY+   +NPLAGC+P+L+Q P  +A Y  I  ++ M
Sbjct: 97  PEIQKIRTKY-KFDNQKMQEELMKLYQEAGMNPLAGCFPMLIQFPFLWAFYGAIVGNIGM 155

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R                +    +F +  +         + P++ +LS  +   +S     
Sbjct: 156 RQ---------------STFLGIFPLGHWDTH-----YVLPVLAALSTLLSSWLSMQS-Q 194

Query: 514 KGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
             Q   + ++ PV+  F     P GL++YW ++N++  +Q  +
Sbjct: 195 PVQQKSMLFVYPVMIFFFTFRLPGGLVLYWIYTNLLVALQVYL 237


>gi|311029446|ref|ZP_07707536.1| membrane protein OxaA [Bacillus sp. m3-13]
          Length = 256

 Score =  113 bits (283), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 113/230 (49%), Gaps = 27/230 (11%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           W ++   P+ + ++   +    ++GI+I++ T+ ++ L  PLA KQ  +   M+ ++P++
Sbjct: 34  WNHYFVYPLSLALTTVADWTSGSYGISIIIVTIAIRTLILPLALKQQKNMLAMQKLKPEM 93

Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           + L++K+K          +Q+ ++ LY+TH +NP AGC+P+L+Q+PV  A Y  I  + E
Sbjct: 94  EALQKKYKDKKKPDDQKEMQQELMALYQTHKVNPAAGCFPMLIQMPVIMAFYYAIGRTTE 153

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511
           +    F+     L   DP                     I P++ +++ FIQ +++    
Sbjct: 154 IAEHSFFW--VSLGQPDPLY-------------------ILPVVAAITTFIQTRVTLTDD 192

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
                 M++N +PV  + A  + P+ L +YW   N+  I Q   + K   
Sbjct: 193 VQPQMKMVMNIIPVFILIAGLTLPSALALYWVIGNLFGIGQGLYLKKRMK 242


>gi|116514957|ref|YP_802586.1| hypothetical protein BCc_007 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116256811|gb|ABJ90493.1| preprotein translocase, membrane component [Buchnera aphidicola
           str. Cc (Cinara cedri)]
          Length = 285

 Score =  113 bits (283), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 76/303 (25%), Positives = 139/303 (45%), Gaps = 27/303 (8%)

Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313
           +  KY+ +  I      +   F             F +              +      +
Sbjct: 1   MLQKYFFTTRILKYLKLYT--FYSHQLNDFFSSFNFISKLSYFKSYILYNIFSNFLCKLE 58

Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373
               +     +       ++  +G  + IA P+F L+++FY    N+GIAI+  T+ +K+
Sbjct: 59  MQINLSKISDN-----LSLINRYGKLHIIAYPLFHLLNFFYKFFNNWGIAIIFVTILIKI 113

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433
           + +PL K QY S   MK +QPKID L+ K+  +  ++  K +++LY +   NP    +  
Sbjct: 114 IIYPLTKLQYTSVLQMKLLQPKIDILKNKYADNKDKM-NKKILELYSSKKFNPFNSFFSF 172

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q P+F A Y V+S S+E+++APF+ WIKDL++ DP +                   + 
Sbjct: 173 LIQTPIFLAFYSVLSSSVELKNAPFFLWIKDLSSYDPYH-------------------VL 213

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
           P++M +S+ +            +   L++  V F      FP+GLI+Y+  SN+++++Q 
Sbjct: 214 PLLMGISILLTQISEIDDKTTRKRKFLSFFSVFFAAFFLWFPSGLILYYITSNIVTLIQH 273

Query: 554 AVI 556
             I
Sbjct: 274 WFI 276


>gi|118442981|ref|YP_876977.1| inner membrane protein translocase component YidC [Clostridium
           novyi NT]
 gi|118133437|gb|ABK60481.1| Membrane protein oxaA [Clostridium novyi NT]
          Length = 246

 Score =  113 bits (283), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 26/238 (10%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +  F       + S   N   ++G+ I++ T+ ++L+ FPL  KQ  S   M  IQP++ 
Sbjct: 22  FIQFFQVMHNWIHSVVANPNISYGLTIIIVTIIIRLVLFPLNYKQIKSQVAMNEIQPELK 81

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L+ K+K   PQ  Q+ M++LYK + +NPL GC P+L+Q P+  A+Y V +         
Sbjct: 82  KLQNKYKN-DPQKQQQEMMKLYKEYGVNPLGGCLPLLIQWPILIALYYVFNN-------- 132

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-----VGIWPIIMSLSMFIQMK-MSPPP 511
                  L+  DP+     F  L    P  +        I PI+  L  ++    M+   
Sbjct: 133 -------LSKIDPSITNVTFLGLKLMNPAILSPSHWYTWILPILSGLLTYLSTAIMTSKN 185

Query: 512 ADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           AD  Q     M+  +M +   +    F   L++YW  +++  I Q  V  +    +  
Sbjct: 186 ADSAQIKQTRMMGGFMTLFITYMSFKFSTALVLYWVTNSLFQIGQTLVTQRSQKVKKE 243


>gi|166032896|ref|ZP_02235725.1| hypothetical protein DORFOR_02617 [Dorea formicigenerans ATCC
           27755]
 gi|166027253|gb|EDR46010.1| hypothetical protein DORFOR_02617 [Dorea formicigenerans ATCC
           27755]
          Length = 358

 Score =  113 bits (283), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 25/259 (9%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           W     +     ML     +  G  GI+I+L T+ V  L  P+   Q  S+     +QP+
Sbjct: 24  WVLGKVMNFIYTMLDGALPSDTGLVGISIILYTILVYTLMLPMTINQQRSSKMQAVVQPE 83

Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +  +++K+K    Q      Q+ + Q+Y  + ++ + GC P+L+Q+P  FA+Y VI    
Sbjct: 84  VMAIQKKYKNKKDQASMLKQQEEIQQVYDKYGVSMMGGCLPLLIQMPFLFALYPVIYSIS 143

Query: 452 EM-----RHAPFWGWIKDLA-AADPTNIFTLFGILPFYLPGFMHV--GIWPIIMSLSMFI 503
           +        A  +  I D+             G    Y    + +   + P++ + + ++
Sbjct: 144 DYVPNITAQANKFLTIPDMTITPGNMLSMAKSGETMGYSAAALVITAILLPVLSAFTQYL 203

Query: 504 QMKMSPP------------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
            MK+S              P       +   MP+  +  + + P G+ IYW  S ++ +V
Sbjct: 204 NMKLSMAVNGSNRPADKDDPTAATMRTMNMTMPLFSLVMVFTLPTGIGIYWIVSAIVRMV 263

Query: 552 QQAVIMKMHGAEIGLIDRL 570
           QQ  I K H ++I + D +
Sbjct: 264 QQVFINK-HLSKISVDDMI 281


>gi|153854259|ref|ZP_01995558.1| hypothetical protein DORLON_01552 [Dorea longicatena DSM 13814]
 gi|149753034|gb|EDM62965.1| hypothetical protein DORLON_01552 [Dorea longicatena DSM 13814]
          Length = 363

 Score =  113 bits (283), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 68/291 (23%), Positives = 125/291 (42%), Gaps = 31/291 (10%)

Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN--------FGIAIMLTTVFVK 372
            E+ + +P      +W     +   +  +M++ YN +           G++I+L T+FV 
Sbjct: 1   MEEKIMVPSLLTAANWPIVGQLCWILGKVMNFIYNFLDKCLPSDSGLVGLSIILYTIFVY 60

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA 428
            L  PL  KQ  ++     + P+I  +++K+K    Q      Q+ + Q+Y  +  +  A
Sbjct: 61  TLLLPLTIKQQRTSKMSSVMNPEIQAIQKKYKNKKDQASMMKQQEEIQQVYDKYGTSMSA 120

Query: 429 GCWPILLQIPVFFAIYKVISI----SLEMRHAP----FWGWIKDLAAADPTNIFTLFGIL 480
           GC P+L+Q+P+ FA+Y VI        E++ AP     +  + DL  +    I       
Sbjct: 121 GCLPLLIQMPLLFALYPVIYNIQKYVPEIKTAPKAVNVFLTLPDLTISPMQMIKNSGSYG 180

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFA 530
              +   +   + P++  L+ +  +K+S            P       +   MP+  VF 
Sbjct: 181 FPAIMIIITAILLPVLSGLTQYGSIKLSQAISGQQLDKDNPMASTMNTMNITMPLFSVFM 240

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           + S P G+ +YW  S V+  VQQ  I K H ++I + + L     K    +
Sbjct: 241 VFSLPTGIGLYWIVSAVVRCVQQVFINK-HLSKISVEEILEQNKEKAEEKR 290


>gi|323452174|gb|EGB08049.1| hypothetical protein AURANDRAFT_11603 [Aureococcus anophagefferens]
          Length = 219

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 17/217 (7%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           +VG++G+AI+L T+ +K + FPL  +Q  ST  M+ +QP I  ++ K+   P Q+    M
Sbjct: 2   VVGSYGVAIVLFTLLLKAVTFPLNYQQIESTTKMQALQPAIKRIQAKYAADPQQMNIM-M 60

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAA------ 468
            +LY+ + +NPLAGC P L+QIP+F A+Y+ +   + E      + WI +L         
Sbjct: 61  AELYQENELNPLAGCLPALVQIPIFIALYRSLLSLAKEDLLEESFLWIPNLEGPVYGAQN 120

Query: 469 -DPTNIF--TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK------GQAMI 519
            D    F      I P      +     P ++ ++      +  PPAD           +
Sbjct: 121 ADWLFKFDQWNGAIPPLGWHDTVAYLALPCLLVVAQSASTTLLQPPADPNNEAAQTSNQV 180

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           L ++P++  F   + PAGL IYW  +N+I+      I
Sbjct: 181 LKYLPLMVGFFSLNVPAGLTIYWFCNNIITTASTLYI 217


>gi|291230686|ref|XP_002735298.1| PREDICTED: Inner membrane protein OXA1L, mitochondrial-like
           [Saccoglossus kowalevskii]
          Length = 424

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 57/326 (17%), Positives = 107/326 (32%), Gaps = 29/326 (8%)

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
           ++  S         G ++KY     +        S    +    +    +          
Sbjct: 16  RNQHSWRTHHVLIHGNNNKYSLCTKLTRHHWKILSTTSVIRHNSSTTHTQTQPVADVTEK 75

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
              I  ++ + A +         +K   +P  E+ +         +     +    NL  
Sbjct: 76  LSQIDPSSTVVAQSVTPEVTEIVQKVQEVPFSELGLGNFTPVGAIQNCLEFLHI--NLHL 133

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVL 411
            +  AI   TV  + L FP+  +   +   + N+ P +  L  K  +             
Sbjct: 134 PWWSAISCCTVIARFLIFPVVIRGQRNAVKLNNVMPTVQRLTNKMNEIRSSGSQLEIARA 193

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAA 467
              +    K H +NP+      L+Q P+F      + K+ ++ +E        W  DL  
Sbjct: 194 TNELQMFMKKHGVNPMKNMLVPLVQAPIFISFFIGLRKMAALPVESMQTGGLYWFTDLTI 253

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSMFIQMKMSPPPADKGQAMILNWMPVV 526
           ADP  I           P    + +  II +     +Q   +P   +     ++  +P V
Sbjct: 254 ADPYYIM----------PAIATLSMLCIIELGGETGVQ---NPQMQN--MKTVMRILPFV 298

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQ 552
            +   +S PA +  YW  SN IS+ Q
Sbjct: 299 ILPFTASMPASVFCYWLTSNFISLGQ 324


>gi|329121491|ref|ZP_08250115.1| ParB/SpoJ family partitioning protein [Dialister micraerophilus DSM
           19965]
 gi|327469406|gb|EGF14876.1| ParB/SpoJ family partitioning protein [Dialister micraerophilus DSM
           19965]
          Length = 266

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 113/234 (48%), Gaps = 26/234 (11%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQY 383
            F++ +      ++A+ M   + + Y +       ++GIAI+  TV +K++  PLA KQ 
Sbjct: 3   DFQIPVLSTLVGYLAEIMRFCLQFCYGITQDLGYPSYGIAIIALTVIIKVILLPLAIKQI 62

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            S   M+ +QP++  +++K+K        + + +LY    ++PL+GC P+L+Q+P   AI
Sbjct: 63  KSMKGMQEVQPQLAAIQKKYKNDK-MRQSQEIQRLYAEKGVSPLSGCLPLLIQMPFLIAI 121

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           +  +       +   + W++ LA  DPT                    + P+I ++S +I
Sbjct: 122 FYALQGFPYDPNHVSFLWLESLAVPDPTY-------------------VLPVISAVSTWI 162

Query: 504 QMKMSPPPADKGQAMILNWMPVV-FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             K +      GQ  ++  +  +   +    FP+GL+IYW  SN+   +QQ ++
Sbjct: 163 ISKQTSGANVAGQQKMMMMVMPLMIGYISVKFPSGLVIYWIVSNLFQGIQQTIM 216


>gi|167748061|ref|ZP_02420188.1| hypothetical protein ANACAC_02805 [Anaerostipes caccae DSM 14662]
 gi|317472414|ref|ZP_07931739.1| YidC/Oxa1 family membrane protein insertase [Anaerostipes sp.
           3_2_56FAA]
 gi|167652053|gb|EDR96182.1| hypothetical protein ANACAC_02805 [Anaerostipes caccae DSM 14662]
 gi|316900134|gb|EFV22123.1| YidC/Oxa1 family membrane protein insertase [Anaerostipes sp.
           3_2_56FAA]
          Length = 331

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 103/246 (41%), Gaps = 22/246 (8%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           + F     ++        + N G+ I+L T+  KL+ FPL  KQ  S    +  QP++ +
Sbjct: 21  WVFGEIMKWIYNGLSAVGIENLGLCIILFTLISKLIIFPLTIKQQRSMKINQVAQPEMMK 80

Query: 399 LREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           +++K++    Q      Q+ M ++Y  +  +P  GC   L+Q P+  A+Y V+       
Sbjct: 81  IQKKYRGKRDQASMMKQQEEMQKVYDKYGTSPTGGCATTLIQFPIIMALYYVVRN----- 135

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-IWPIIMSLSMFIQMKMSPPPAD 513
                G+I ++        F L   +       + +  I P++ +   ++  + S    D
Sbjct: 136 ---LEGYIPNI--PKSAYEFVLGINIQNTPGFKLSIYLIIPLLSAFFQYLSARTSMADMD 190

Query: 514 K------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
                      ++  MP++ +F   + P G+ IYW+ S V   VQQ +I   +     + 
Sbjct: 191 SDNPAAGMSKNMMLMMPIMSLFMCITLPVGIGIYWTASAVFQWVQQILIN-NYYNHTNMQ 249

Query: 568 DRLRST 573
             +  +
Sbjct: 250 KIIEKS 255


>gi|163931198|pdb|3BLC|A Chain A, Crystal Structure Of The Periplasmic Domain Of The
           Escherichia Coli Yidc
 gi|163931199|pdb|3BLC|B Chain B, Crystal Structure Of The Periplasmic Domain Of The
           Escherichia Coli Yidc
          Length = 330

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 101/304 (33%), Gaps = 22/304 (7%)

Query: 56  VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
              D    A      + +K   L  +IN +G   +   L  Y  +++S  P   L   ++
Sbjct: 22  SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETS 79

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFER 170
            +  Y A+             N       +               +   + +A    F +
Sbjct: 80  PQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPXTYTDAAGNTFTK 139

Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVL 224
           T  L    Y   +   V N     +  S  G++ +         T ++ F +     A  
Sbjct: 140 TFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAY 199

Query: 225 GDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                      +  I  +   N      W+    +Y+A+ +IP  + + +  F   + G+
Sbjct: 200 STPDAAYAAYAFDTIADNENLNISSKGGWVAXLQQYFATAWIPHNDGTNN--FYTANLGN 257

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
                 + +  + + PG++    + L+ G +              P  ++ +D+GW +FI
Sbjct: 258 GIAAIGYKSQPVLVQPGQTGAXNSTLWVGPEIQDK-----XAAVAPHLDLTVDYGWLWFI 312

Query: 343 AKPM 346
           ++P+
Sbjct: 313 SQPL 316


>gi|332638155|ref|ZP_08417018.1| cell division protein [Weissella cibaria KACC 11862]
          Length = 277

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 94/245 (38%), Gaps = 29/245 (11%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
               IA     ++        N+G+ I++ T+ ++LL  PL   Q  S   M+ + P + 
Sbjct: 41  HGIIIANFSRSILGVSAWFGNNYGLGIIVFTLLIRLLILPLMVYQTRSMRKMQEVAPALK 100

Query: 398 ELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
            ++ K+     +    +Q     LYK   +NP A   P+++Q+P+  A+Y  I  + ++ 
Sbjct: 101 AIQAKYPNRDTESMAAMQAEQSALYKEAGVNPFASLLPLIVQMPILIALYTAIRTTKQL- 159

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PP 511
               + W + L   D                   H+ I PI+ +L  F    +     P 
Sbjct: 160 ETGTFLWAQ-LGQHD-------------------HLFILPILAALFTFASSYLVMLGQPE 199

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
            +     +   MP++      + P+ L +YW  SN   + Q   I   +  EI      +
Sbjct: 200 KNGMTTSMTYIMPIMIFIFAINVPSALSLYWVVSNAFQVAQTWTIQ--NPFEIRREREAK 257

Query: 572 STFSK 576
               +
Sbjct: 258 KQAER 262


>gi|15896967|ref|NP_350316.1| putative inner membrane protein translocase component YidC
           [Clostridium acetobutylicum ATCC 824]
 gi|38503142|sp|Q97CW0|OXAA_CLOAB RecName: Full=Membrane protein oxaA
 gi|15026843|gb|AAK81656.1|AE007868_12 Inner membrane protein, SpoIIIJ [Clostridium acetobutylicum ATCC
           824]
 gi|325511144|gb|ADZ22780.1| putative inner membrane protein translocase component YidC
           [Clostridium acetobutylicum EA 2018]
          Length = 254

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 115/237 (48%), Gaps = 22/237 (9%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +  F       + +   +   ++G+AI++ T+ +K L  P + KQ  S+  M  +QP++ 
Sbjct: 11  FVQFFDSINKFVYNIVPDKNYSYGLAIIILTIIIKTLLVPFSIKQIKSSVLMNALQPELK 70

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L+ K  +S PQ LQ+  ++LYK  N+NP  GC  +++Q P+  A+Y V   SL ++   
Sbjct: 71  KLQTK-LKSDPQKLQQETMKLYKEKNVNPFGGCLLLIIQYPILIALYYVFY-SLHIKGIG 128

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQ 516
            + WI DL+     + +T +              I PI+   + ++   ++ PP+ D  Q
Sbjct: 129 -FLWIHDLSQKATFSNWTTW--------------ILPIVSGATTYLSGILTMPPSSDPAQ 173

Query: 517 AM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
                 +   M +  ++   +F A L++YW+ SN+  + Q  +I+    A++     
Sbjct: 174 RKQTTTMNIGMSIFLLWMSWNFSAALVLYWTVSNLFQMAQSKIIITAVTAKLEAEKN 230


>gi|159477094|ref|XP_001696646.1| inner membrane ALBINO3-like protein 1 [Chlamydomonas reinhardtii]
 gi|158282871|gb|EDP08623.1| inner membrane ALBINO3-like protein 1 [Chlamydomonas reinhardtii]
 gi|294845969|gb|ADF43128.1| ALB3p [Chlamydomonas reinhardtii]
          Length = 495

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 21/230 (9%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++  ++G +I+L T+ VKLL +PL K+Q  S   ++ ++P+ID ++++F +   + +QK 
Sbjct: 136 HVPYSYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGEDKDK-IQKE 194

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRHAPFWGWIKDLAAADPTN 472
              LY+   +NPLAGC P L  IP+F  ++  ++      +     + ++  LA      
Sbjct: 195 TSVLYEQAGVNPLAGCLPTLATIPIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMA 254

Query: 473 IFTLFGILPFYLP------------GFMHVGIWPIIMSLSMFIQMKMSPPPADK------ 514
           +        +  P                    P+++    +    ++ PP D       
Sbjct: 255 MRQSGLGTSWLWPLGPDGAPPIGWEDAAAYLTLPLLLVAVQYASSSVTSPPIDPKDENAN 314

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            Q  +L ++P++  +   + PAGL +Y+  + V+S   Q  + K+ GA +
Sbjct: 315 TQRALLVFLPLMVGWFSLNVPAGLSLYYLANTVLSSAIQIYLKKLGGANV 364


>gi|38502952|sp|Q83MN6|OXAA_TROWT RecName: Full=Membrane protein oxaA
          Length = 310

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 34/264 (12%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                +   + +      ++ ++I+   + ++    P+  KQ  +   M  I P++  ++
Sbjct: 25  VFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLIPVFLKQIRAQRKMLEIAPEVRRIQ 84

Query: 401 EKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS------ 450
           EK+K        Q + + M+++Y+    NPL+ C PI+LQ+PVFF +Y+VI  +      
Sbjct: 85  EKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLPIVLQMPVFFGLYQVIESAQNAGTG 144

Query: 451 ---------LEMRHAPFWG--WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
                    ++ R +  +G   + D  + D      L     F L   +  G+   IM  
Sbjct: 145 VGPLNGPLGMDFRDSRIFGVVPLHDSFSHDFY---ALQAGQAFNLITMIVAGVLTAIMIA 201

Query: 500 SMFIQM-KMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
                  K+ P             K Q ++L  +P++F+    SFP G++IYW+ SNV S
Sbjct: 202 VQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFLGMGFSFPVGILIYWTASNVWS 261

Query: 550 IVQQAVIMKMHGAEIGLIDRLRST 573
            VQQAV +  + +   L   LR  
Sbjct: 262 AVQQAVAIYRNPSPGSLAFELRRK 285


>gi|38372242|sp|Q8S339|ALB31_CHLRE RecName: Full=Inner membrane ALBINO3-like protein 1, chloroplastic;
           Flags: Precursor
 gi|20136422|gb|AAM11662.1|AF492768_1 albino3-like protein [Chlamydomonas reinhardtii]
          Length = 495

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 21/230 (9%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++  ++G +I+L T+ VKLL +PL K+Q  S   ++ ++P+ID ++++F +   + +QK 
Sbjct: 136 HVPYSYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGEDKDK-IQKE 194

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRHAPFWGWIKDLAAADPTN 472
              LY+   +NPLAGC P L  IP+F  ++  ++      +     + ++  LA      
Sbjct: 195 TSVLYEQAGVNPLAGCLPTLATIPIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMA 254

Query: 473 IFTLFGILPFYLP------------GFMHVGIWPIIMSLSMFIQMKMSPPPADK------ 514
           +        +  P                    P+++    +    ++ PP D       
Sbjct: 255 MRQSGLGTSWLWPLGPDGAPPIGWEDAAAYLTLPLLLVAVQYASSSVTSPPIDPKDENAN 314

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            Q  +L ++P++  +   + PAGL +Y+  + V+S   Q  + K+ GA +
Sbjct: 315 TQRALLVFLPLMVGWFSLNVPAGLSLYYLANTVLSSAIQIYLKKLGGANV 364


>gi|237752890|ref|ZP_04583370.1| inner membrane protein oxaA [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375157|gb|EEO25248.1| inner membrane protein oxaA [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 99

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 20/106 (18%)

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQA 517
             WI DL+  DP                     + PI+M  +M++Q  ++P    D  Q 
Sbjct: 1   MLWITDLSVMDPYF-------------------VLPILMGATMYLQQHLTPTAFNDPMQE 41

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            I  ++P++F     +FP+GL++YW  +N+ SI+QQ +I K    +
Sbjct: 42  KIFKFLPLIFTIFFVTFPSGLVLYWFVNNIFSILQQLLINKSLERK 87


>gi|295101866|emb|CBK99411.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
           [Faecalibacterium prausnitzii L2-6]
          Length = 361

 Score =  113 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 61/302 (20%), Positives = 120/302 (39%), Gaps = 59/302 (19%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
            D    Y +  P+  +M + YNL+ N+G  I++ T+ ++LL  PL   Q  S A M   Q
Sbjct: 3   RDMNILYILGVPLGYVMEWIYNLIPNYGWDIIIFTIVIRLLSIPLQLNQQKSMAKMSAFQ 62

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE- 452
           P I ++++K+K   P+  Q+ +++L +     P AGC P+L+   V F + +V+   L+ 
Sbjct: 63  PMIADIQKKYKD-KPEKQQEELMKLQQEFGYKPTAGCMPMLVNFLVMFGVIEVVYRPLQR 121

Query: 453 ------------------------------------MRHAPFWGWIKDLAAADPTNIFTL 476
                                               +           +   D  N  T 
Sbjct: 122 IFHIGAEAITAAGDAMTALGISFTQVTRDTNIIAQVLAGESTV---TSVFTPDQLNTITE 178

Query: 477 FGILPFY-------------LPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMI--- 519
           FG    +                 + + I+PI+  ++MFI   +S      + Q  +   
Sbjct: 179 FGQHMDFFGIDLTRVPQYSLAADNLPLLIFPILAVVTMFISTHISMKASGQEMQGSMKLT 238

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           +  MP+++VF   + P    +Y+  SN++  VQ   +M+       + +++++  +    
Sbjct: 239 MYMMPLMYVFFCFTVPCAFSLYYVISNIVMTVQTQ-VMRKIYDPEKMKEQVKAEIASRRK 297

Query: 580 SQ 581
            +
Sbjct: 298 EE 299


>gi|323340870|ref|ZP_08081121.1| membrane protein [Lactobacillus ruminis ATCC 25644]
 gi|323091721|gb|EFZ34342.1| membrane protein [Lactobacillus ruminis ATCC 25644]
          Length = 300

 Score =  113 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 91/262 (34%), Gaps = 34/262 (12%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
                + + +        L+     + G+ G AI+L T  V+L+  P+  KQ  +    +
Sbjct: 30  GKPYGFVYDHMAVPTQHFLVWLSNLMGGSLGWAIILLTFVVRLILMPVMLKQSRNATIQQ 89

Query: 391 N--------IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
                    +       +     +    + + ++ LY+ + I+     GC P+L+Q+P+F
Sbjct: 90  EKISHLKPLMDDIAKRQQAAQTDAEKMAISQELMSLYRDNGISMTGGIGCLPLLIQMPIF 149

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            A+Y  I  S E+    ++  I                         + + I        
Sbjct: 150 AALYAAIQYSPEL-SKSYFYGIN-------------------LGHSSIILTILSFAAYAL 189

Query: 501 MFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
                 +  P   + Q  ++ +M PV+        PAGL +Y+    V + +Q  +I  M
Sbjct: 190 QGWISMLGMPKEQRKQMQMMMFMSPVMITVMTFVSPAGLGLYFFVGGVFACIQTLIINAM 249

Query: 560 HGAEIGLIDRLRSTFSKNYNSQ 581
                 +  ++     K    +
Sbjct: 250 ---RPKIKQQIAEELKKTPPKK 268


>gi|294846010|gb|ADF43168.1| ALB3m [Chlamydomonas reinhardtii]
          Length = 493

 Score =  113 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 21/230 (9%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++  ++G +I+L T+ VKLL +PL K+Q  S   ++ ++P+ID ++++F +   + +QK 
Sbjct: 134 HVPYSYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGEDKDK-IQKE 192

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRHAPFWGWIKDLAAADPTN 472
              LY+   +NPLAGC P L  IP+F  ++  ++      +     + ++  LA      
Sbjct: 193 TSVLYEQAGVNPLAGCLPTLATIPIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMA 252

Query: 473 IFTLFGILPFYLP------------GFMHVGIWPIIMSLSMFIQMKMSPPPADK------ 514
           +        +  P                    P+++    +    ++ PP D       
Sbjct: 253 MRQSGLGTSWLWPLGPDGAPPIGWEDAAAYLTLPLLLVAVQYASSSVTSPPIDPKDENAN 312

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            Q  +L ++P++  +   + PAGL +Y+  + V+S   Q  + K+ GA +
Sbjct: 313 TQRALLVFLPLMVGWFSLNVPAGLSLYYLANTVLSSAIQIYLKKLGGANV 362


>gi|257127031|ref|YP_003165145.1| hypothetical protein Lebu_2303 [Leptotrichia buccalis C-1013-b]
 gi|257050970|gb|ACV40154.1| 60 kDa inner membrane insertion protein [Leptotrichia buccalis
           C-1013-b]
          Length = 228

 Score =  113 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 114/222 (51%), Gaps = 19/222 (8%)

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           +   +  ++     +VGN+GIAI++ T  ++++ FPL  KQ  S   M+++QP++++++E
Sbjct: 7   LVDFVVHVLKAINGVVGNYGIAIIIVTFLMRIIVFPLTLKQEKSMKKMRDLQPELEKIKE 66

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
           K K +P Q LQ+   ++YK + +NPL GC P+L+Q+P+F A+Y           A  + W
Sbjct: 67  KHKDNP-QELQRRTAEIYKENGVNPLGGCLPLLIQMPIFVALYYAFIGDAIPADA-KFLW 124

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-----DKGQ 516
              L   D   +   F              + PI+     FIQ K+          ++  
Sbjct: 125 FT-LKQPDRLFMLGKF-----------AFNLLPILNVGVTFIQQKIMTSATSGQETNQQM 172

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
             +L  MP++ +F   + P+G+ +Y+  S  +S+VQQ  I+K
Sbjct: 173 QSMLYMMPLMMLFIFYNMPSGVTLYYLVSGALSLVQQYFILK 214


>gi|111020651|ref|YP_703623.1| putative inner membrane protein translocase component YidC
           [Rhodococcus jostii RHA1]
 gi|110820181|gb|ABG95465.1| probable membrane protein, OxaA family protein [Rhodococcus jostii
           RHA1]
          Length = 370

 Score =  113 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/282 (19%), Positives = 103/282 (36%), Gaps = 48/282 (17%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            F      G  +   K    +     +    + ++++     ++ + +    KQ  +T  
Sbjct: 3   DFIYYPVSGILWVWHKVFGAIPFLGPDSGITWALSVVFLVFTLRAVLYKPFVKQVRTTRQ 62

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QP+I  L++K+     Q     M +L K H  NP+ GC P+L Q PVF  ++ V+ 
Sbjct: 63  MQELQPQIKALQKKYSG-DRQRQAVEMQKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVLR 121

Query: 449 I--------------------------SLE---------MRHAPFWGWIKDLAAADPTNI 473
                                      S+E         +  AP   WI    A    + 
Sbjct: 122 SFNRTGTGIGQLGMSVEANANTPNYFFSVEDVQSFLSARLFGAPISAWITMPKAQ--LDA 179

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-----MSPPPADKGQAMILN-----WM 523
           F  +G +P  L   +      II S++     +      SP  A   Q+ I+N       
Sbjct: 180 FAAYGPIPTVLNIAVVAVPLMIIASIATHFNSRASVARQSPEAAANPQSAIMNKLALWIF 239

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           P+  +      P  +++YW  +N+ +  QQ ++ +    E  
Sbjct: 240 PLGVLVGGPFLPIAILLYWVSNNIWTYGQQHIVFRRIDQEEE 281


>gi|296110738|ref|YP_003621119.1| cell division protein [Leuconostoc kimchii IMSNU 11154]
 gi|295832269|gb|ADG40150.1| cell division protein [Leuconostoc kimchii IMSNU 11154]
          Length = 279

 Score =  113 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 29/250 (11%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
                W   +A     ++        N+G+ I++ T+ ++ L  PL   Q  S   M+ +
Sbjct: 38  ASHSFWSAVVAAFTSAILGASGWFGNNYGVGIIVFTILIRFLILPLMVYQIQSMMKMQIV 97

Query: 393 QPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           QP +  L+ K+        Q++      LYK   +NP A   P+++Q+PV  A+Y+ I  
Sbjct: 98  QPALKALQAKYPGKDTESRQLMMAEQQALYKDAGVNPFASMLPLIVQMPVLIALYQSIYN 157

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S  ++ +  + W++ L   DP                     + PI+ +L  F    +S 
Sbjct: 158 SPVLK-SGKFLWLQ-LGNNDPYY-------------------VLPILAALFTFASSWLST 196

Query: 510 PPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
                 +     +    PVV  F+  + P+ L +YW   N+   +Q   +   +  ++  
Sbjct: 197 QATPEQNAMTKAMPYIFPVVIFFSAMAVPSALSLYWVVGNLFQTIQTFALQ--NPFKLRR 254

Query: 567 IDRLRSTFSK 576
              L++   +
Sbjct: 255 QRELKAQKER 264


>gi|94993599|ref|YP_601697.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS10750]
 gi|94547107|gb|ABF37153.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS10750]
          Length = 275

 Score =  113 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 27/212 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
            + +  G+ G+ I+L T+ ++L+  PL   Q  S+  M++IQP++ EL++K+     Q  
Sbjct: 51  QWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTQTR 110

Query: 412 QK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
            K       LYK + +NP A   P+L+Q+PV  A+++ ++    ++    + W++ LA  
Sbjct: 111 MKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLK-TGTFLWVE-LAQH 168

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525
           D                   H+ + P++ ++  F+   ++   A   +    +++  MP+
Sbjct: 169 D-------------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPL 209

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +  F   +  +G+++YW+ SN   +VQ  ++ 
Sbjct: 210 MIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 241


>gi|19745380|ref|NP_606516.1| hypothetical protein spyM18_0229 [Streptococcus pyogenes MGAS8232]
 gi|71902868|ref|YP_279671.1| hypothetical protein M28_Spy0202 [Streptococcus pyogenes MGAS6180]
 gi|94987840|ref|YP_595941.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS9429]
 gi|94989717|ref|YP_597817.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS10270]
 gi|94991720|ref|YP_599819.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS2096]
 gi|38503059|sp|Q8P2P8|OXAA1_STRP8 RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|19747487|gb|AAL97015.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
 gi|71801963|gb|AAX71316.1| conserved hypothetical protein [Streptococcus pyogenes MGAS6180]
 gi|94541348|gb|ABF31397.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS9429]
 gi|94543225|gb|ABF33273.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS10270]
 gi|94545228|gb|ABF35275.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS2096]
          Length = 275

 Score =  113 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 27/212 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
            + +  G+ G+ I+L T+ ++L+  PL   Q  S+  M++IQP++ EL++K+     Q  
Sbjct: 51  QWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTQTR 110

Query: 412 QK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
            K       LYK + +NP A   P+L+Q+PV  A+++ ++    ++    + W++ LA  
Sbjct: 111 MKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLK-TGTFLWVE-LAQH 168

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525
           D                   H+ + P++ ++  F+   ++   A   +    +++  MP+
Sbjct: 169 D-------------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPL 209

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +  F   +  +G+++YW+ SN   +VQ  ++ 
Sbjct: 210 MIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 241


>gi|322411167|gb|EFY02075.1| OxaA-like protein precursor [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 307

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 100/289 (34%), Gaps = 39/289 (13%)

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           N +         +      +            W +      + +  +  N    +G+AI+
Sbjct: 6   NRILFSGLALSILFTLTGCVGRDAHGNPKGMIWEFLGKPMSYFIDYFANNAGLGYGLAII 65

Query: 366 LTTVFVKLLF--------FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
           + T+ V+ L         +  + +           +P    +++   Q      Q  ++ 
Sbjct: 66  IVTIVVRTLILPLGLYQSWKASYQSEKMAFLKPVFEPINKRIKQASSQEEKMAAQTELMA 125

Query: 418 LYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475
             + H INPL   GC P+L+Q+P F A+Y     +  +  + F G   DL +        
Sbjct: 126 AQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR------- 176

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFAL 531
                           +   I++   F Q  +S     + Q      ++  MP++ +   
Sbjct: 177 --------------SLVLTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIVMS 222

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            S PAG+ +YW      SI+QQ +    +  +  L  +    ++KN   
Sbjct: 223 FSLPAGVGLYWLVGGFFSIIQQLITT--YILKPRLHKQFEEEYAKNPPK 269


>gi|50913585|ref|YP_059557.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS10394]
 gi|73921525|sp|Q5XDY9|OXAA1_STRP6 RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|50902659|gb|AAT86374.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS10394]
          Length = 275

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 104/212 (49%), Gaps = 27/212 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
            + +  G+ G+ I+L T+ ++L+  PL   Q  S+  M++IQP++ EL++K+     Q  
Sbjct: 51  QWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTQTR 110

Query: 412 QK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
            K       LYK + +NP A   P+L+Q+PV  A+++ ++    ++    + W++ LA  
Sbjct: 111 MKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLK-TGTFLWVE-LAQH 168

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525
           D                   H+ + P++ ++  F+   ++       +    +++  MP+
Sbjct: 169 D-------------------HLYLLPVLAAVFTFLSTWLTNLATKEKNVMMTVMIYVMPL 209

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +  F   +  +G+++YW+ SN   +VQ  ++ 
Sbjct: 210 MIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 241


>gi|130491697|ref|NP_001076302.1| hypothetical protein LOC562963 [Danio rerio]
 gi|126631996|gb|AAI34231.1| Zgc:163091 protein [Danio rerio]
          Length = 469

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/295 (15%), Positives = 94/295 (31%), Gaps = 42/295 (14%)

Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGA-KEFPTIHHYEKDLAIPRFEMLI 334
               D      A      +   P  +   T  +          +     + ++    +  
Sbjct: 94  SEPPDAAISAPASIPTPAVDPTPSVTPPITEQVAEAPLTALDVLQGVGAEASLSELGL-- 151

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
                      +  L+ + +  +G      I+  T+  +   FP+  K     A + N+ 
Sbjct: 152 ---CNSTPVGLIQNLLEFMHVSIGLPWWGAIVAGTIVARCAVFPVIVKGQREAAKLNNVM 208

Query: 394 PKIDELREKFKQSPPQVLQKAM-------IQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
           P++ +L  +  ++     +          +   K  ++NP  G    L+Q P+F + +  
Sbjct: 209 PEMTKLTNRMNEAKQSGNKFEFSKAYTDLMMFQKKKDVNPFRGFLVPLVQAPIFLSFFIA 268

Query: 447 ISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           +    E+           W  DL AADP                     I PI ++ +M 
Sbjct: 269 LRKMSELPVPSLQTGGLWWFTDLTAADPFY-------------------ILPIAVTGTMV 309

Query: 503 IQMKMSPPPA--DK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
             +++       +        +   MP V +    +FP  +  YW  SN+ S+ Q
Sbjct: 310 AILELGAESGVDNPNLRAMKTVFRIMPFVILPLTINFPTAVFTYWMTSNLFSLAQ 364


>gi|15674429|ref|NP_268603.1| hypothetical protein SPy_0247 [Streptococcus pyogenes M1 GAS]
 gi|21909712|ref|NP_663980.1| hypothetical protein SpyM3_0176 [Streptococcus pyogenes MGAS315]
 gi|28895093|ref|NP_801443.1| hypothetical protein SPs0181 [Streptococcus pyogenes SSI-1]
 gi|54038807|sp|P65632|OXAA1_STRP3 RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|54041695|sp|P65631|OXAA1_STRP1 RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|13621523|gb|AAK33324.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
 gi|21903896|gb|AAM78783.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
 gi|28810338|dbj|BAC63276.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 275

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 104/212 (49%), Gaps = 27/212 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
            + +  G+ G+ I+L T+ ++L+  PL   Q  S+  M++IQP++ EL+ K+     Q  
Sbjct: 51  QWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQRKYAGKDTQTR 110

Query: 412 QK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
            K       LYK + +NP A   P+L+Q+PV  A+++ ++    ++    + W++ LA  
Sbjct: 111 MKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLK-TGTFLWVE-LAQH 168

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525
           D                   H+ + P++ ++  F+   ++   A   +    +++  MP+
Sbjct: 169 D-------------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPL 209

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +  F   +  +G+++YW+ SN   +VQ  ++ 
Sbjct: 210 MIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 241


>gi|225570322|ref|ZP_03779347.1| hypothetical protein CLOHYLEM_06419 [Clostridium hylemonae DSM
           15053]
 gi|225160854|gb|EEG73473.1| hypothetical protein CLOHYLEM_06419 [Clostridium hylemonae DSM
           15053]
          Length = 356

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 116/282 (41%), Gaps = 31/282 (10%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF--------GIAIMLTTVFVKLLFFPLAKK 381
                +W     IA  +  +M++ Y ++ N         G++I+  T+ V  +  PL  K
Sbjct: 6   LLTAANWPIVGQIAWLLGKVMNFIYTVLDNILPSDNGLIGLSIIFYTIIVYTIMLPLTVK 65

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQI 437
           Q  +      + P+I  +++K+K    Q      Q+ + Q+Y  +  +   GC P+L+Q+
Sbjct: 66  QQKTAKMSSVMNPEIQAIQKKYKNKKDQASMMKQQEEVQQVYDKYGTSMTGGCLPLLIQM 125

Query: 438 PVFFAIYKVIS----ISLEMRHAPF----WGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489
           P+ FA+Y VI         ++ A      +  I DL  A    I              + 
Sbjct: 126 PLLFALYPVIYDMQRYVPAIKGAATSVNKFITIPDLTMAPIQMIKESGSFGIAPAVVIIT 185

Query: 490 VGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLI 539
             + P++  L+ ++ +K+S            P       +   MP+  VF + +  +G+ 
Sbjct: 186 AILLPVLSGLTQYLSIKLSQNISGQQMDKDNPMAGTMKTMNMTMPIFSVFMVFTLSSGIG 245

Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +YW  S V+  VQQ +I K H ++  + D +     K    +
Sbjct: 246 LYWIVSAVVRCVQQVLINK-HLSKTSVEDIIEKNKEKAAEKR 286


>gi|256827813|ref|YP_003151772.1| preprotein translocase subunit YidC [Cryptobacterium curtum DSM
           15641]
 gi|256583956|gb|ACU95090.1| preprotein translocase subunit YidC [Cryptobacterium curtum DSM
           15641]
          Length = 257

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 117/232 (50%), Gaps = 2/232 (0%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            +      +F  +S+FY+  G++G+AI+  T+  +LL +PL +KQ  S+  M+ +QP + 
Sbjct: 1   MWDAFKDFIFWCISFFYSFFGDWGMAIVTVTIIFRLLVYPLMQKQIKSSFQMQKVQPLLK 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           E++ K+     Q +Q+ M ++Y     NP+AGC PI LQ+P+F A+++V+          
Sbjct: 61  EIQTKYAD-DQQRMQEEMQKIYAEAKFNPIAGCLPIFLQMPIFIALFQVLQEMTTRTQGS 119

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + +   +     +        +  ++P  + + I+       M +Q +     A K Q 
Sbjct: 120 TYQFYHLVPDLTLSPSSAFGQGVLTFIPYIILLLIFAGATFAPMILQQRGQADSAQKRQT 179

Query: 518 MILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
           ++++ +M +  +F   + PAG++++W  S++  + QQ + M++   E     
Sbjct: 180 IMMSGFMSLFMLFIGWTSPAGVLLFWGASSLFGVAQQQITMRVLKREDEAKQ 231


>gi|186503883|ref|NP_001118405.1| ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane
           transporter [Arabidopsis thaliana]
 gi|330253080|gb|AEC08174.1| inner membrane protein ALBINO3 [Arabidopsis thaliana]
          Length = 342

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 18/207 (8%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           ++   +G AI+L T+ VK   +PL K+Q  ST  M+N+QPKI  +++++  +  + +Q  
Sbjct: 135 HVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLE 193

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470
             +LYK   +NPLAGC P L  IPV+  +Y+ +S  + E      + WI  L        
Sbjct: 194 TSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIAA 253

Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518
               + I  LF    G  P      +   + P+++  S ++ M++  PP   D  Q    
Sbjct: 254 RQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTL 313

Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSW 544
            +  ++P++  +   S P+GL IYW  
Sbjct: 314 LVFKFLPLMIGYFALSVPSGLSIYWLA 340


>gi|218291090|ref|ZP_03495113.1| 60 kDa inner membrane insertion protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218238975|gb|EED06182.1| 60 kDa inner membrane insertion protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 342

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 58/223 (26%), Positives = 110/223 (49%), Gaps = 24/223 (10%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
               +  I   +  LM YF +L GN +GI+I+L  + V+L+  PL  +Q      M  +Q
Sbjct: 37  PKNVWGSILHGISDLMDYFAHLFGNDYGISILLMAILVRLVVLPLFLRQIRFQRAMVKLQ 96

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P+I ++R K+ +   Q +Q+ +++LY+   +NPLAGC+P+L+Q+P  +A Y  I  ++ M
Sbjct: 97  PEIQKIRTKY-KFDNQKMQEELMKLYQEAGMNPLAGCFPMLIQLPFLWAFYGAIVGNVGM 155

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R                +    +F +  +         I P++ +LS  +   +S     
Sbjct: 156 RQ---------------STFLGIFPLGHWDTH-----YILPVLAALSTLLSSWLSMQS-Q 194

Query: 514 KGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
             Q   + ++ P++  F     P GL++YW ++N++  +Q  +
Sbjct: 195 PVQQKSMLFVYPLMIFFFAFRLPGGLVLYWIYTNLLVALQVYL 237


>gi|28572956|ref|NP_789736.1| putative inner membrane protein translocase component YidC
           [Tropheryma whipplei TW08/27]
 gi|38502953|sp|Q83N53|OXAA_TROW8 RecName: Full=Membrane protein oxaA
 gi|28411089|emb|CAD67474.1| conserved integral membrane protein [Tropheryma whipplei TW08/27]
          Length = 310

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 34/264 (12%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                +   + +      ++ ++I+   + ++    P+  KQ  +   M  I P++  ++
Sbjct: 25  VFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLIPVFLKQIRAQRKMLEIAPEVRRIQ 84

Query: 401 EKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS------ 450
           EK+K        Q + + M+++Y+    NPL+ C PI+LQ+PVFF +Y+VI  +      
Sbjct: 85  EKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLPIVLQMPVFFGLYQVIESAQNAGTG 144

Query: 451 ---------LEMRHAPFWG--WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
                    ++ R +  +G   + D  + D      L     F L   +  G+   IM  
Sbjct: 145 VGPLNGPLGMDFRDSRIFGVVPLHDSFSHDFY---ALQAGQAFNLITMIVAGVLTAIMIA 201

Query: 500 SMFIQM-KMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
                  K+ P             K Q ++L  +P++F+    SFP G++IYW+ SNV S
Sbjct: 202 VQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFLGMGFSFPVGILIYWTASNVWS 261

Query: 550 IVQQAVIMKMHGAEIGLIDRLRST 573
            VQQAV +  + +   L   LR  
Sbjct: 262 GVQQAVAIYRNPSPGSLAFELRRK 285


>gi|332365878|gb|EGJ43635.1| stage III sporulation protein J [Streptococcus sanguinis SK355]
          Length = 271

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 29/232 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409
            F +  G+ GI I+L T+ ++ +  P+ + Q  S+  ++ +QP I  L+EK+     +  
Sbjct: 46  RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESR 105

Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L +   +LYK   +NP A   P+L+Q+PV  A+++ ++  +E      + W+ +L A 
Sbjct: 106 TALAEETQKLYKEMGVNPYASFIPLLIQMPVLLALFQALTR-VEFMKTGHFLWL-NLGAT 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525
           DPT                    I P++ +L  F    +S       + G  +++  MPV
Sbjct: 164 DPTF-------------------ILPLLAALFTFFSTWLSNKALPERNGGMTVMMYLMPV 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           V  F      +G+ +YW+ SN   +VQ  ++   +  +I      +    + 
Sbjct: 205 VIFFFALYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254


>gi|262281818|ref|ZP_06059587.1| membrane protein oxaA 1 [Streptococcus sp. 2_1_36FAA]
 gi|262262272|gb|EEY80969.1| membrane protein oxaA 1 [Streptococcus sp. 2_1_36FAA]
          Length = 271

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/257 (20%), Positives = 101/257 (39%), Gaps = 29/257 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+       +      F     F +   + GI I+L T+ ++ +  P+ + Q  S+  M+
Sbjct: 25  EVTSQSTDLWEKFVFFFAETIRFLSFNSSLGIGIILFTIVIRTVLLPVFQIQMNSSRKMQ 84

Query: 391 NIQPKIDELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP I  L+ K+     +          +LYK   +NPLA   P+ +Q+PV  A+++ +
Sbjct: 85  EAQPHIKALQAKYPGKDMESRNLLATETQKLYKELGVNPLASFIPLFIQMPVLLALFQAL 144

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +  +E      + W+ +LA  DP                     I P++ +L  F+   +
Sbjct: 145 TR-VEFMKTGHFLWL-NLAEKDPYF-------------------ILPVLAALFTFLSSWL 183

Query: 508 SP---PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--KMHGA 562
           +       +    ++   MP++  +   SF +G+ +YW+ SN   + Q  V+       A
Sbjct: 184 NNKGLAEKNGAMTVMTYLMPLLIFWFALSFSSGVALYWTVSNAYQVGQTLVLSNPFKMIA 243

Query: 563 EIGLIDRLRSTFSKNYN 579
           E            +   
Sbjct: 244 EREAKLNAAREQEEKKK 260


>gi|312866151|ref|ZP_07726372.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei
           F0415]
 gi|311098555|gb|EFQ56778.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei
           F0415]
          Length = 319

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/260 (20%), Positives = 95/260 (36%), Gaps = 31/260 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
                  W         ++  +  NL   +G  +++  V V+LL  PL   Q  S A   
Sbjct: 30  GKPTGTVWNLLGKPMSNLITYFAQNLGLGYGWGLVIVIVLVRLLILPLGLHQSRSAAYQA 89

Query: 391 --------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
                     +P   +L+E   Q      Q  ++Q  + + I+ L   GC P+L+Q P F
Sbjct: 90  AKREHLAPIFEPINKKLKEATTQEEKMAAQTELMQANRDNGISMLGGMGCLPLLIQFPFF 149

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            A+Y     +  +     + W  +L   D                    V I  I+  + 
Sbjct: 150 SAMYWAARYTPGIL-KSNFLWF-NLGNRD-----------------IPIVAIIAILYLIQ 190

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            ++  +  P    K   M +   P++ V    S P+ ++IYW    + SI+QQ +    +
Sbjct: 191 AWLGAQQMPEEQRKQAGMTMYMTPIIMVIFGFSQPSAVVIYWFVGGIFSIIQQLIAN--Y 248

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
             +  L  ++   F KN   
Sbjct: 249 IFKPRLRKQVEEEFKKNPPK 268


>gi|241895504|ref|ZP_04782800.1| stage III sporulation protein J precursor [Weissella
           paramesenteroides ATCC 33313]
 gi|241871250|gb|EER75001.1| stage III sporulation protein J precursor [Weissella
           paramesenteroides ATCC 33313]
          Length = 277

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 98/269 (36%), Gaps = 27/269 (10%)

Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374
              +      +          +     IA     ++        N+GI I++ T+ ++LL
Sbjct: 18  VALLIMIIAAVMYDGHVAGNGFWRGIIIANFSRSILGVSAWFGDNYGIGIIVFTLLIRLL 77

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCW 431
             PL   Q  S   M+ I P + +L+EK+        Q +Q    QLYK   +NP A   
Sbjct: 78  ILPLMVYQTGSMRKMQEIGPALKKLQEKYSSRDPETMQAMQAEQKQLYKDAGVNPFASFI 137

Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491
           P+++Q+P+  A+Y  I  + ++     + W++ L   DP                     
Sbjct: 138 PLIVQMPILIALYTAIRTT-KLLETGTFFWVQ-LGDRDPYF------------------- 176

Query: 492 IWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
           I PI+ +L  F    +        +     +   MP++      S P+ L +YW  SN  
Sbjct: 177 ILPILAALFTFASSYLVMMGQPEKNGMTTSMTYIMPIMIFIFAISVPSALSLYWVISNAF 236

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
            + Q   I            +  +  +K 
Sbjct: 237 QVAQTWTIQNPFEIRREREAKKEAERAKQ 265


>gi|257792846|ref|YP_003183452.1| 60 kDa inner membrane insertion protein [Eggerthella lenta DSM
           2243]
 gi|317489239|ref|ZP_07947756.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp.
           1_3_56FAA]
 gi|325832339|ref|ZP_08165338.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1]
 gi|257476743|gb|ACV57063.1| 60 kDa inner membrane insertion protein [Eggerthella lenta DSM
           2243]
 gi|316911640|gb|EFV33232.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp.
           1_3_56FAA]
 gi|325486175|gb|EGC88629.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1]
          Length = 261

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 10/231 (4%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            +      +F ++ +FY+  G++G+AI++ TV  ++L  PL  KQ  S+  M+ +QP + 
Sbjct: 1   MWDVFKDWIFDIIHFFYDFCGDWGLAIIIVTVIFRILISPLMHKQTKSSFQMQKVQPLMQ 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           EL+ K+    P  LQ+ M +LY     NPLAGC P+LLQ+P+F A+++V+S     R + 
Sbjct: 61  ELQRKYADDQP-RLQEEMQKLYAEVKFNPLAGCLPMLLQMPIFMALFQVLSEM-GSRTSG 118

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI----QMKMSPPPAD 513
                 +L    P+ +      L      F+   I  +I + + F+        +     
Sbjct: 119 TTYEFYNLV---PSLVMRPSEALAVGFGTFVPYLILMVIFAGATFLPMVLMQMGNKDNPQ 175

Query: 514 KGQAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           + Q MI+   M V  ++   S PAG++++W  S+++ I QQ + M++    
Sbjct: 176 RKQTMIMAAVMSVFMLWISWSSPAGVLLFWGASSLMGIAQQQISMRIMKKR 226


>gi|320547389|ref|ZP_08041678.1| membrane protein [Streptococcus equinus ATCC 9812]
 gi|320447985|gb|EFW88739.1| membrane protein [Streptococcus equinus ATCC 9812]
          Length = 305

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 83/235 (35%), Gaps = 35/235 (14%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL---- 411
                 +  ++    +  L    + K    +  M  ++P    + E+ + +  Q      
Sbjct: 60  FGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYLKPIFAPINERMRNAKTQEEKLAA 119

Query: 412 QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
           Q  ++   K + IN L   GC P+L+Q+P F A+Y     +  +  +             
Sbjct: 120 QTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAAQYTNGVAES------------- 166

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM----ILNWMPV 525
                  F  +       +   +  I+     F Q  +S     + Q       +  MP+
Sbjct: 167 ------TFLGIDLGTRSMLLTAVIAILY----FFQSWLSMQAVAEEQRAAMKGTMYVMPL 216

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           + VF   S PA +++YW      SI+QQ + M     +  L  ++   F KN   
Sbjct: 217 MMVFFGMSMPASVLLYWLVGGFFSIIQQLITM--FIIKPKLRKQIAEEFEKNPPK 269


>gi|227514115|ref|ZP_03944164.1| inner membrane insertion protein [Lactobacillus fermentum ATCC
           14931]
 gi|227087486|gb|EEI22798.1| inner membrane insertion protein [Lactobacillus fermentum ATCC
           14931]
          Length = 277

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 102/235 (43%), Gaps = 27/235 (11%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W ++I       + +  N+ G +G+ I++ T+ ++++  PL   Q  S    + + P++
Sbjct: 36  IWDHYIVYNCSRFIIWLSNIFGGYGMGIIIFTIIIRIIILPLMFYQTKSMMKTQELAPQL 95

Query: 397 DELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             L++K+     + +Q+      +LYK   +NP A   P+L+Q+PV +A+Y+ I  + ++
Sbjct: 96  KALQKKYSSKDRETMQQLQIEQQKLYKEAGVNPFASMLPLLIQLPVMWALYQAIWRTAQL 155

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512
           +    + W++ L   DP                     + PI+ ++  FI   +S     
Sbjct: 156 K-TGTFLWLQ-LGHTDPYF-------------------VLPILAAVFTFISSWLSMASMP 194

Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             +     +   MP++  F    F A + +YW  +N   +VQ  VI         
Sbjct: 195 EKNSMTTTMTWVMPIMIFFMALQFSAAITLYWVVTNAFQVVQTLVIQNPFKIRRE 249


>gi|290891476|ref|ZP_06554535.1| hypothetical protein AWRIB429_1925 [Oenococcus oeni AWRIB429]
 gi|290478918|gb|EFD87583.1| hypothetical protein AWRIB429_1925 [Oenococcus oeni AWRIB429]
          Length = 286

 Score =  112 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 100/249 (40%), Gaps = 29/249 (11%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   ++        ++G  I++ T+ ++ L  PL      S+ NM  + P + +++
Sbjct: 48  ITGFFANSILGVSKLCGNSYGFGIVIFTLLIRFLILPLMVYSISSSKNMAKVAPLVKKVQ 107

Query: 401 EKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
            K+K          LQ+    +YK   +NP A   P+L+Q+PV +A+++ +S +  ++  
Sbjct: 108 AKYKGKRDRDSMTKLQEETSSIYKEAGVNPYASLLPVLIQLPVLWALFQSVSSTPALKTG 167

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
             + W++ L + DP                     + PI+ +L  FI   MS     K Q
Sbjct: 168 S-FFWLQ-LGSPDPYF-------------------VLPILAALFTFISSWMSTASMGKDQ 206

Query: 517 ---AMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
              A  +    P + +F+  +  + L +YW  +N   +VQ   +     A      +  +
Sbjct: 207 PGFAKAMPYIFPFIILFSALAVSSALSLYWVATNAFQVVQTFFLQNPFKARAEEKAKELA 266

Query: 573 TFSKNYNSQ 581
              +    +
Sbjct: 267 ELERKKAIK 275


>gi|116630436|ref|YP_819589.1| preprotein translocase subunit YidC [Lactobacillus gasseri ATCC
           33323]
 gi|238853336|ref|ZP_04643716.1| membrane protein OxaA 1 [Lactobacillus gasseri 202-4]
 gi|311111578|ref|ZP_07712975.1| membrane protein OxaA 1 [Lactobacillus gasseri MV-22]
 gi|116096018|gb|ABJ61170.1| Preprotein translocase subunit YidC [Lactobacillus gasseri ATCC
           33323]
 gi|238834024|gb|EEQ26281.1| membrane protein OxaA 1 [Lactobacillus gasseri 202-4]
 gi|311066732|gb|EFQ47072.1| membrane protein OxaA 1 [Lactobacillus gasseri MV-22]
          Length = 291

 Score =  112 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 113/269 (42%), Gaps = 21/269 (7%)

Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367
           +   A               P      +W   Y +      ++     +  ++G AI++ 
Sbjct: 19  MLTLALVVTGCASTNGSSVAPISHTSGNWWDRYIVYYISQFILWIASLVRDSYGWAIIIF 78

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNI 424
           T+ V+++  PL      S A  + +QP++D LR+K+        Q LQ+   +LYK   I
Sbjct: 79  TIIVRIILLPLNAISIKSMAKQQKVQPQMDALRKKYPGKDVESRQKLQEETSKLYKEAGI 138

Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484
           NP  GC P+L+Q+PV +A+Y+ I  + ++     + W+ DL   DP  I       P   
Sbjct: 139 NPYTGCLPMLIQLPVMYALYQAIWRTPQL-QNGRFLWM-DLGRPDPYYIM------PVLA 190

Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWS 543
             F  +         S +I    +P  +  G    + + MP++   +     + + +YW 
Sbjct: 191 AAFTFI---------STYISQMSTPQSSQNGMTKGMTYLMPLIIGVSAIGIQSAISLYWV 241

Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
            SN+  +VQ  ++      +  L ++ ++
Sbjct: 242 ISNLFQVVQTFILQNPFKYQRELEEQKKA 270


>gi|145346453|ref|XP_001417701.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like
           protein [Ostreococcus lucimarinus CCE9901]
 gi|144577929|gb|ABO95994.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like
           protein [Ostreococcus lucimarinus CCE9901]
          Length = 264

 Score =  112 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 65/215 (30%), Positives = 116/215 (53%), Gaps = 17/215 (7%)

Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422
           AI++ T+ VK + +PL + Q VS+ NMKN+QP+I  +REK++    + + K + ++Y+ +
Sbjct: 49  AIIIVTILVKFVTYPLTRDQVVSSLNMKNLQPQIAAIREKYED-DQERMNKEINRVYEEN 107

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
            +NPLAGC P LL  PV   +Y+  + +  +  A    W    + A PT+   L  +LP 
Sbjct: 108 GVNPLAGCGPALLTFPVLAGLYRAFNNA-GIDGAFDEAWFFLPSLAGPTDARDLSWLLPL 166

Query: 483 YLPGFMHVG--------IWPIIMSLSMFIQMKMSPP----PADKG--QAMILNWMPVVFV 528
                  +G        I+P++ ++S F+ M++  P      D+   Q+++L  +P+   
Sbjct: 167 DSDYAPPIGWEEASLYLIFPVLTTISQFVSMEVLKPEETEKTDEMKNQSVLLKLLPLFIG 226

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           +   + PAGL +YW W+NV +   Q  + +  GA+
Sbjct: 227 YISLTVPAGLALYWFWNNVFTTGIQVFL-RNGGAK 260


>gi|184156317|ref|YP_001844657.1| hypothetical protein LAF_1841 [Lactobacillus fermentum IFO 3956]
 gi|183227661|dbj|BAG28177.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
 gi|299783733|gb|ADJ41731.1| Putative uncharacterized protein [Lactobacillus fermentum CECT
           5716]
          Length = 277

 Score =  112 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 102/235 (43%), Gaps = 27/235 (11%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W ++I       + +  N+ G +G+ I++ T+ ++++  P+   Q  S    + + P++
Sbjct: 36  IWDHYIVYNCSRFIIWLSNIFGGYGMGIIIFTIIIRIIILPMMFYQTKSMMKTQELAPQL 95

Query: 397 DELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             L++K+     + +Q+      +LYK   +NP A   P+L+Q+PV +A+Y+ I  + ++
Sbjct: 96  KALQKKYSSKDRETMQQLQIEQQKLYKEAGVNPFASMLPLLIQLPVMWALYQAIWRTAQL 155

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512
           +    + W++ L   DP                     + PI+ ++  FI   +S     
Sbjct: 156 K-TGTFLWLQ-LGHTDPYF-------------------VLPILAAVFTFISSWLSMASMP 194

Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             +     +   MP++  F    F A + +YW  +N   +VQ  VI         
Sbjct: 195 EKNSMTTTMTWVMPIMIFFMALQFSAAITLYWVVTNAFQVVQTLVIQNPFKIRRE 249


>gi|170052227|ref|XP_001862125.1| inner membrane protein oxa1-1, mitochondrial [Culex
           quinquefasciatus]
 gi|167873150|gb|EDS36533.1| inner membrane protein oxa1-1, mitochondrial [Culex
           quinquefasciatus]
          Length = 419

 Score =  112 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 98/263 (37%), Gaps = 49/263 (18%)

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           + +     +    +L   +   I + TV V++L FPL      + A M N  P++  L+ 
Sbjct: 121 MVQNCMEFLHITADL--PWWGCIAIGTVCVRMLLFPLVIASQRNAAKMNNNMPQMQVLQM 178

Query: 402 KFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISIS 450
           K  ++             + M+Q  K  ++NPL      L Q P+F      + ++ ++ 
Sbjct: 179 KMTEARQAGNAIDSARYAQEMVQFMKEKDLNPLKNMLVPLAQAPIFISFFMGLRQMANVP 238

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP- 509
           ++        W  DL   D                        PII S++MF+ +++   
Sbjct: 239 VDSLREGGLFWFPDLTICDQFY-------------------ALPIITSITMFLTIELGTD 279

Query: 510 ---PPADKGQ--AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ-----------Q 553
                A   Q    +L  MP+  +    +FP  + +YW +SN  S+VQ            
Sbjct: 280 SARMSAANMQTVRYVLRAMPLFILPFTINFPGAICLYWVFSNFFSLVQVGFLRIPAVRDY 339

Query: 554 AVIMKMHGAEIGLIDRLRSTFSK 576
             I ++   +   +   +  F++
Sbjct: 340 FKIDRLITHKPETLPIKKKKFAE 362


>gi|118587491|ref|ZP_01544916.1| conserved hypothetical protein [Oenococcus oeni ATCC BAA-1163]
 gi|118432141|gb|EAV38882.1| conserved hypothetical protein [Oenococcus oeni ATCC BAA-1163]
          Length = 286

 Score =  112 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 99/249 (39%), Gaps = 29/249 (11%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   ++        ++G  I++ T+ ++ L  PL      S+ NM  + P + +++
Sbjct: 48  ITGFFANSILGVSKLCGNSYGFGIVIFTLLIRFLILPLMVYSISSSKNMAKVAPLVKKVQ 107

Query: 401 EKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
            K+K          LQ+    +YK   +NP A   P+L+Q+PV +A+++ +S +  ++  
Sbjct: 108 AKYKGKRDRDSMTKLQEETSSIYKEAGVNPYASLLPVLIQLPVLWALFQSVSSTPALKTG 167

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
             + W + L + DP                     + PI+ +L  FI   MS     K Q
Sbjct: 168 S-FFWFQ-LGSPDPYF-------------------VLPILAALFTFISSWMSTASMGKDQ 206

Query: 517 ---AMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
              A  +    P + +F+  +  + L +YW  +N   +VQ   +     A      +  +
Sbjct: 207 PGFAKAMPYIFPFIILFSALAVSSALSLYWVATNAFQVVQTFFLQNPFKARAEEKAKELA 266

Query: 573 TFSKNYNSQ 581
              +    +
Sbjct: 267 ELERKKAIK 275


>gi|217077890|ref|YP_002335608.1| inner membrane protein OxaA [Thermosipho africanus TCF52B]
 gi|217037745|gb|ACJ76267.1| inner membrane protein OxaA [Thermosipho africanus TCF52B]
          Length = 434

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 64/303 (21%), Positives = 120/303 (39%), Gaps = 26/303 (8%)

Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325
                 +    + S G      KF+ N +     K       ++ G  +   I     D 
Sbjct: 139 DDRLRNNIFLSFYSKGDIISIIKFNGNTLGGNSVKGSNLRFLVYIGPYKKTLIKSAFSDD 198

Query: 326 AIPRFEMLIDW----GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381
                EML       GWF FI  P+     +  +   NFG+ I++ T+ V+ + +PL   
Sbjct: 199 YDLISEMLKTVSGVGGWFDFILYPLVYFFGWINDFTRNFGLTIIVFTIIVRFVLYPLYHS 258

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
           Q  S   M+ +QP ++++++K+K    Q  Q+ +++ Y+ + INP +GC    +Q+P+F 
Sbjct: 259 QTKSMIKMRKLQPIVEQIKKKYKDP--QKQQQELLKAYRENKINPASGCLMAFVQLPIFI 316

Query: 442 AIYKVISISLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            +Y+VI    E    +  + +  DL A           ++   + G+    I        
Sbjct: 317 ILYQVIRYYQEEFAFSGRFLFWNDLTAG--GFSANWIFLVIQIVAGYYLALI-------- 366

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
                       D   A     M  +F F     P+G+ +Y++ + +I +     I K +
Sbjct: 367 ---------TSQDSRTAWQSIIMSFIFPFLFIGLPSGVFLYYTANTLIQLGITYYIYKRY 417

Query: 561 GAE 563
             +
Sbjct: 418 KIK 420


>gi|222152571|ref|YP_002561746.1| OxaA-like protein [Streptococcus uberis 0140J]
 gi|222113382|emb|CAR41025.1| membrane protein OxaA 2 precursor [Streptococcus uberis 0140J]
          Length = 307

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 71/208 (34%), Gaps = 23/208 (11%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +  + +            P   +++    Q      Q  ++   + + IN L   GC P
Sbjct: 83  SWKASYQSEKMAFLKPIFDPINQKMKNATTQEEKLAAQTELMAAQRENGINMLGGMGCLP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +L+Q+P F A+Y     +                        + F  +       +  GI
Sbjct: 143 LLIQMPFFSAMYFAALHT-------------------KGISTSTFMGIDLGSRSLVLTGI 183

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
             ++     ++ M+            ++  MP++ +F   S PAG+ +YW      SI+Q
Sbjct: 184 IAVLYYFQSWLSMQAVAEEQRAQMKTMMYTMPIMMIFMTLSLPAGVGLYWLVGGFFSIIQ 243

Query: 553 QAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           Q +    +  +  L  ++   F  N   
Sbjct: 244 QLITT--YVLKPKLRQQIEEEFKNNPPK 269


>gi|229824628|ref|ZP_04450697.1| hypothetical protein GCWU000282_01975 [Catonella morbi ATCC 51271]
 gi|229785999|gb|EEP22113.1| hypothetical protein GCWU000282_01975 [Catonella morbi ATCC 51271]
          Length = 266

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 29/225 (12%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y I      ++     L G++G+ I+L T+ + +   PL K Q  S   M  IQP+I+EL
Sbjct: 33  YIIYPLSQFIIWLSNLLGGSYGLGIILFTIIILVALTPLTKMQMDSQFQMAEIQPEIEEL 92

Query: 400 REKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +++F        + LQ+A   L K   +N  AGC P+L+Q+PV FA+Y+VI+ +  +R  
Sbjct: 93  KKQFPNRDRASMEALQQAQQDLMKERGVNQFAGCLPLLIQLPVMFALYQVITRTEVLRD- 151

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
             + W+  L  ADP                     I PI+ ++  +    ++   A+  Q
Sbjct: 152 GHFLWLA-LGKADPYF-------------------ILPILAAVLTWYSSYLT-VKANPIQ 190

Query: 517 ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
                 +    P + +    +FPA + +YW  SN + +VQ  +  
Sbjct: 191 NGASKAMTYVAPAMILLVSFNFPAAVTLYWVVSNAVRVVQTFIFY 235


>gi|15674505|ref|NP_268679.1| OxaA-like protein [Streptococcus pyogenes M1 GAS]
 gi|71910109|ref|YP_281659.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS5005]
 gi|38503157|sp|Q9A1C3|OXAA2_STRP1 RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|13621607|gb|AAK33400.1| hypothetical protein SPy_0351 [Streptococcus pyogenes M1 GAS]
 gi|71852891|gb|AAZ50914.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS5005]
          Length = 307

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 31/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +  + +           +P    +++   Q      Q  ++   + H INPL   GC P
Sbjct: 83  SWKASYQSEKMAFLKPVFEPINKRIKQANSQEEKMAAQTELMAAQRAHGINPLGGIGCLP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +L+Q+P F A+Y     +  +  + F G   DL +                        +
Sbjct: 143 LLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR---------------------SLV 179

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
              I++   F Q  +S     + Q      ++  MP++ +F   S PAG+ +YW      
Sbjct: 180 LTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFF 239

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           SI+QQ +    +  +  L  +++  ++KN   
Sbjct: 240 SIIQQLITT--YLLKPRLHKQIKEEYAKNPPK 269


>gi|308803795|ref|XP_003079210.1| chloroplast membrane protein (ISS) [Ostreococcus tauri]
 gi|116057665|emb|CAL53868.1| chloroplast membrane protein (ISS) [Ostreococcus tauri]
          Length = 453

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 67/214 (31%), Positives = 115/214 (53%), Gaps = 17/214 (7%)

Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422
           AI++ T+ VK++ +PL K Q VS+ NMKN+QP+I  +REK++    + + K + ++Y+ +
Sbjct: 91  AIIIVTILVKMVTYPLTKDQVVSSLNMKNLQPQIAAIREKYED-DQERMNKEINRVYEEN 149

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
            +NPLAGC P LL  PV   +Y+  + +  +  A    W    + A PT+   L  +LP 
Sbjct: 150 GVNPLAGCGPALLSFPVLAGLYRAFNNA-GIDGAFDEPWFFLPSLAGPTDARDLSWLLPL 208

Query: 483 YLPGFMHVG--------IWPIIMSLSMFIQMKMSPPPAD------KGQAMILNWMPVVFV 528
                  +G        ++PI+ +LS F+ M++  P  D      + Q+++L  +P    
Sbjct: 209 DADLAPPIGWDDASLYLLFPIMTTLSQFVSMEVLKPEEDEKTKEMQNQSVLLKLLPFFIG 268

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           +   + PAGL +YW W+NV +   Q  + +  GA
Sbjct: 269 YISLTVPAGLALYWFWNNVFTTGIQVYL-RNGGA 301


>gi|255527590|ref|ZP_05394454.1| 60 kDa inner membrane insertion protein [Clostridium
           carboxidivorans P7]
 gi|296186788|ref|ZP_06855189.1| stage III sporulation protein J family protein [Clostridium
           carboxidivorans P7]
 gi|255508723|gb|EET85099.1| 60 kDa inner membrane insertion protein [Clostridium
           carboxidivorans P7]
 gi|296048502|gb|EFG87935.1| stage III sporulation protein J family protein [Clostridium
           carboxidivorans P7]
          Length = 219

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 27/235 (11%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +  F       +     N   ++GIAI+L T+ ++++  PL  KQ  S+  M  +QP+  
Sbjct: 8   FVQFFELVHHGVAGVIPNKNISYGIAIILVTLIIRIILLPLNIKQTKSSLVMSELQPETK 67

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +++EK+K   PQ  Q+ M++LYK    +PL+GC P+L+Q P+F A+Y V +    +    
Sbjct: 68  KIQEKYKN-DPQRAQQEMMKLYKEKGASPLSGCLPMLIQWPIFIALYYVFNNLHGIDGV- 125

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + WI DL   D                         I+  L+ +    +     D  QA
Sbjct: 126 HFLWISDLGKRDIF---------------------LAILSGLTTYFSGSLMMMSGDSAQA 164

Query: 518 M----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
                +   M +  VF   S  + L++YW  +N I I Q  V+ K+   +  +  
Sbjct: 165 KQSTTMNVGMSIFMVFISWSLKSALVLYWVVNNSIQIAQTLVMKKVDKNKGNIKA 219


>gi|139473067|ref|YP_001127782.1| membrane protein OxaA 1 precursor [Streptococcus pyogenes str.
           Manfredo]
 gi|306828048|ref|ZP_07461313.1| stage III sporulation protein J [Streptococcus pyogenes ATCC 10782]
 gi|134271313|emb|CAM29531.1| membrane protein OxaA 1 precursor [Streptococcus pyogenes str.
           Manfredo]
 gi|304429764|gb|EFM32808.1| stage III sporulation protein J [Streptococcus pyogenes ATCC 10782]
          Length = 269

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 27/212 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
            + +  G+ G+ I+L T+ ++L+  PL   Q  S+  M++IQP++ EL++K+     Q  
Sbjct: 45  QWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTQTR 104

Query: 412 QK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
            K       LYK + +NP A   P+L+Q+PV  A+++ ++    ++    + W++ LA  
Sbjct: 105 MKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLK-TGTFLWVE-LAQH 162

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525
           D                   H+ + P++ ++  F+   ++   A   +    +++  MP+
Sbjct: 163 D-------------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPL 203

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +  F   +  +G+++YW+ SN   +VQ  ++ 
Sbjct: 204 MIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 235


>gi|225707022|gb|ACO09357.1| Inner membrane protein OXA1L, mitochondrial precursor [Osmerus
           mordax]
          Length = 421

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/313 (18%), Positives = 109/313 (34%), Gaps = 57/313 (18%)

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359
               + + + A       +H    ++++    +    G    +     ML  +  +L   
Sbjct: 66  TQPISESLVEAAPTALDVLHGPGAEVSLAELGL----GCSTPVGLVQNMLEFFHVDLGVP 121

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-- 417
           +  AI++ TV  ++L FP+  K     A + N+ P++ +L  K  ++     +    +  
Sbjct: 122 WWGAIVIGTVLARMLVFPVIVKGQREAAKLNNVMPEMTKLTSKMNEAKQSGNKFDFAKAY 181

Query: 418 -----LYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468
                  K H++NPL G    L Q PVF     A+ K+    +         W  DL AA
Sbjct: 182 ADLTMFQKKHDVNPLRGFLVPLAQTPVFISFFIALRKMSYHPVPSMQTGGLFWFTDLTAA 241

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMI---LNWM 523
           DP                     I P+ ++ +MF  +++       +     +      M
Sbjct: 242 DPYF-------------------ILPLAVTGTMFFILELGAESGIDNPNMRAMKTVFRIM 282

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK------------------MHGAEIG 565
           P + +    +FP  +  YW  SN  S+ Q A++                        + G
Sbjct: 283 PFIILPLTINFPTAVFTYWLTSNCFSLGQVALLKHPLVRQKLRIPEKIIHPPSSMPPQDG 342

Query: 566 LIDRLRSTFSKNY 578
           L D ++  +    
Sbjct: 343 LFDGIKKGWKNAQ 355


>gi|28209867|ref|NP_780811.1| putative inner membrane protein translocase component YidC
           [Clostridium tetani E88]
 gi|38502981|sp|Q899S4|OXAA_CLOTE RecName: Full=Membrane protein oxaA
 gi|28202302|gb|AAO34748.1| conserved membrane protein [Clostridium tetani E88]
          Length = 220

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 27/224 (12%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
             F       + S   N   ++G+AI+  T+ +KL+  PL  K   ST  +  IQP+I +
Sbjct: 9   VEFFVIIHKFISSIITNPNYSYGVAIIFVTLIIKLILLPLNIKSMRSTIRINEIQPEIQK 68

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +++K+K   PQ LQ+  ++LYK +NINP   C P+LLQ P+  A+Y V +    +     
Sbjct: 69  IQKKYKN-DPQRLQQEQMKLYKEYNINPFGSCLPLLLQWPILIALYYVFNNIQGISGVS- 126

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W+KDLA+ D                      +  ++   + +    +  P  D  QA 
Sbjct: 127 FLWVKDLASPD---------------------IVLAVLAGATQYYSGLLMNPKGDNTQAK 165

Query: 519 ----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
               +   M ++ +F  S   A L+IYW   N+I + Q  +  K
Sbjct: 166 TASNMNLSMSIMMIFISSRLKAALVIYWVTGNLIQMGQTILTKK 209


>gi|319938685|ref|ZP_08013049.1| membrane protein oxaA 2 [Streptococcus anginosus 1_2_62CV]
 gi|319811735|gb|EFW08001.1| membrane protein oxaA 2 [Streptococcus anginosus 1_2_62CV]
          Length = 305

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 102/264 (38%), Gaps = 39/264 (14%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF----PLAKKQYVST 386
                + W          +  +  N+   FG+AI++ T+ V+L+        + K    +
Sbjct: 29  GKPAGFVWDIIGRPMSLAIQYFANNMGLGFGVAIIIVTLIVRLIILPLGLYQSWKATYQS 88

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPL--AGCWPILLQIPVF 440
             M  ++P  + ++E+ K +  Q  + A  Q      K + +N L   GC P+L+Q+P F
Sbjct: 89  EKMNYLKPIFEPIQERMKNAETQEEKLAAQQALMAAQKENGVNMLGGIGCLPLLIQLPFF 148

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            A+Y     +  +  +                   +F  +P      +      II+ + 
Sbjct: 149 SALYFSAQYTEGVAKS-------------------VFLGIPLGKASIL----LTIIVGIL 185

Query: 501 MFIQMKMSPPPADKGQA----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            FIQ  ++    D+ Q      ++   P++ V    + PAG+ +YW     I I+QQ +I
Sbjct: 186 YFIQSALTLVGVDEVQKEQMKKMMYMSPLMIVIFSFTAPAGVTLYWVVGGFIMIIQQLII 245

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580
              H     L  R+   +  N   
Sbjct: 246 N--HYIRPQLRKRVAEEYKNNPPK 267


>gi|71910022|ref|YP_281572.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS5005]
 gi|71852804|gb|AAZ50827.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS5005]
          Length = 269

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 104/212 (49%), Gaps = 27/212 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
            + +  G+ G+ I+L T+ ++L+  PL   Q  S+  M++IQP++ EL+ K+     Q  
Sbjct: 45  QWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQRKYAGKDTQTR 104

Query: 412 QK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
            K       LYK + +NP A   P+L+Q+PV  A+++ ++    ++    + W++ LA  
Sbjct: 105 MKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLK-TGTFLWVE-LAQH 162

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525
           D                   H+ + P++ ++  F+   ++   A   +    +++  MP+
Sbjct: 163 D-------------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPL 203

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +  F   +  +G+++YW+ SN   +VQ  ++ 
Sbjct: 204 MIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 235


>gi|329117329|ref|ZP_08246046.1| putative stage III sporulation protein J [Streptococcus parauberis
           NCFD 2020]
 gi|326907734|gb|EGE54648.1| putative stage III sporulation protein J [Streptococcus parauberis
           NCFD 2020]
          Length = 270

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 27/212 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---P 408
            + +  G+ G+ I+L T+ +++L  PL   Q  S+  M+++QP++ EL+ K+        
Sbjct: 45  QWLSFNGSIGVGIILFTLIIRILLMPLFNIQIKSSQRMQDLQPELKELQTKYAGKDTESR 104

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L +    LYK + +NP A  +P+L+Q+PV  A+++ +S    +R    + WI+ LA A
Sbjct: 105 MALAEESQALYKRNGVNPYASIFPLLIQMPVMIALFQALSRVPFLREGS-FLWIE-LAKA 162

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNW-MPV 525
           DP                     I PI+ +L  F+   ++            ++ + MP+
Sbjct: 163 DPYF-------------------ILPILAALFTFLSTWLTNLAAKEKNMVMTMMTYAMPL 203

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +  F   S  +G+++YW+ SN   + Q  ++ 
Sbjct: 204 MIFFMGISLASGVVLYWTVSNAFQVFQLLLLN 235


>gi|167766868|ref|ZP_02438921.1| hypothetical protein CLOSS21_01385 [Clostridium sp. SS2/1]
 gi|167711416|gb|EDS21995.1| hypothetical protein CLOSS21_01385 [Clostridium sp. SS2/1]
 gi|291558407|emb|CBL37207.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
           [butyrate-producing bacterium SSC/2]
          Length = 333

 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 103/269 (38%), Gaps = 21/269 (7%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +    +        +      F +I + ++  ++       N G+ I+L T+  KL+  
Sbjct: 2   MLLAQAQQSTGNGGILAPFVIIFGWIIRAIYDGLAAMGIY--NVGLCIILFTLVSKLILL 59

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWP 432
           P+  KQ  S    +++QP+I+++ +K++    Q      Q+ M ++Y  +  +P  GC P
Sbjct: 60  PVTMKQQRSMKINQHMQPEINKITKKYRNKRDQASMMKQQEEMQKVYAKYGSSPTGGCLP 119

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
            L+Q P+  A+Y VI      R    +            N+F    +          + I
Sbjct: 120 TLIQFPIIMALYYVI------RGVNTYIPQIARDVQFKPNLFLGMDLNSAPGFRLTPLLI 173

Query: 493 WPIIMSLSMFIQMKMSPPPADK--------GQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
            P++  +  F+  K S                  ++  MP++      S P G+ +YWS 
Sbjct: 174 IPVLSFIFQFLSAKTSMSTTQMDDSTPGAGMTKSMMYTMPLMSFVMCISLPIGIGLYWSA 233

Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           S +   +QQ      H     +   +  +
Sbjct: 234 SALFQYIQQVAFN-YHYDHADMDKIIEKS 261


>gi|331701545|ref|YP_004398504.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus
           buchneri NRRL B-30929]
 gi|329128888|gb|AEB73441.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus
           buchneri NRRL B-30929]
          Length = 343

 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 100/255 (39%), Gaps = 40/255 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           + ++A+P   +M +    VG++G AI++ TV V+L   P+  +Q  ++   +     I  
Sbjct: 37  YDYLARPAQAIMEWIAQFVGSYGWAIIVLTVVVRLFLLPIMVRQMKASTIQQEKMQLIRP 96

Query: 399 LREKFKQS--------PPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVIS 448
              + ++               +AM+ LYK + I+     GC P+L+Q+P+F A+Y  I 
Sbjct: 97  QMAELQKRQKAASTPEEQTAASQAMMALYKQNGISMTGGIGCLPLLIQMPIFTALYAAIR 156

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
            S E+ H                   T+F  +      ++      ++   S  +Q  ++
Sbjct: 157 YSPELSH-------------------TVFMGIRLGQSSWL----LAVLSFASYLLQGYIA 193

Query: 509 PPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
                  Q      ++   P++ +    S PAGL IY+    + + +Q  +I        
Sbjct: 194 MLGTPAAQKKQMGAMMLLSPIMILVFTLSAPAGLGIYFFIGGLFACLQTLIIN---MYRP 250

Query: 565 GLIDRLRSTFSKNYN 579
            +  R+         
Sbjct: 251 RIRKRIAKENEGKKA 265


>gi|21909792|ref|NP_664060.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS315]
 gi|28896515|ref|NP_802865.1| OxaA-like protein precursor [Streptococcus pyogenes SSI-1]
 gi|209558852|ref|YP_002285324.1| OxaA-like protein precursor [Streptococcus pyogenes NZ131]
 gi|38503041|sp|Q8K8J2|OXAA2_STRP3 RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|21903977|gb|AAM78863.1| putative SpoIIIJ family protein [Streptococcus pyogenes MGAS315]
 gi|28811769|dbj|BAC64698.1| hypothetical protein [Streptococcus pyogenes SSI-1]
 gi|209540053|gb|ACI60629.1| Membrane protein oxaA 2 precursor [Streptococcus pyogenes NZ131]
          Length = 307

 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 31/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +  + +           +P    +++   Q      Q  ++   + H INPL   GC P
Sbjct: 83  SWKASYQSEKMAFLKPVFEPINKRIKQANSQEEKMAAQTELMAAQRAHGINPLGGIGCLP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +L+Q+P F A+Y     +  +  + F G   DL +                        +
Sbjct: 143 LLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR---------------------SLV 179

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
              I++   F Q  +S     + Q      ++  MP++ +F   S PAG+ +YW      
Sbjct: 180 LTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFF 239

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           SI+QQ +    +  +  L  +++  ++KN   
Sbjct: 240 SIIQQLITT--YLLKPRLHKQIKEEYAKNPPK 269


>gi|148274159|ref|YP_001223720.1| putative inner membrane protein translocase component YidC
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|147832089|emb|CAN03062.1| unnamed protein product [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 320

 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 108/251 (43%), Gaps = 28/251 (11%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
                    ++  +    +    + ++I+   + V+    P+  +Q  +   M  + P++
Sbjct: 16  ELILVGFHTLWTTLGLDPDNGATWVLSIVGLVLVVRAALIPIFVRQIKNQRRMMEVAPQL 75

Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS-- 450
            ++++K+K    Q     + +  + LYK    NPL+ C P+LLQ+P+FF++Y V+  +  
Sbjct: 76  KKIQDKYKGKRDQFSREAMSRETMALYKDTGTNPLSSCLPLLLQMPIFFSLYSVLHRAAV 135

Query: 451 -----LEMRHA---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
                + + +A     +G    L A   + I T  G     +   +      I+MS S F
Sbjct: 136 EELPGIGLLNAQLSRSFGESSFLGAPLQSAISTANG----NVTVIVIATTMVILMSASQF 191

Query: 503 IQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           I                 P  K Q ++L  +P+VF  +  +FP G++ YW  SN  ++ Q
Sbjct: 192 ITQLQIMAKNMSEETKASPMFKQQRILLYILPLVFAVSGIAFPLGVMFYWLVSNFWTMGQ 251

Query: 553 QAVIMKMHGAE 563
           Q ++++     
Sbjct: 252 QFLVIRNMPTP 262


>gi|71902952|ref|YP_279755.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS6180]
 gi|71802047|gb|AAX71400.1| inner membrane protein [Streptococcus pyogenes MGAS6180]
          Length = 307

 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 31/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +  + +           +P    +++   Q      Q  ++   + H INPL   GC P
Sbjct: 83  SWKASYQSEKMAFLKPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +L+Q+P F A+Y     +  +  + F G   DL +                        +
Sbjct: 143 LLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR---------------------SLV 179

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
              I++   F Q  +S     + Q      ++  MP++ +F   S PAG+ +YW      
Sbjct: 180 LTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFF 239

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           SI+QQ +    +  +  L  +++  ++KN   
Sbjct: 240 SIIQQLITT--YLLKPRLHKQIKEEYAKNPPK 269


>gi|312136222|ref|YP_004003560.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor
           owensensis OL]
 gi|311776273|gb|ADQ05760.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
           owensensis OL]
          Length = 341

 Score =  111 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 65/254 (25%), Positives = 119/254 (46%), Gaps = 34/254 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
            WF F+A P+  L+   Y+ +       ++GIA++L T+ V+ L  PL  KQ  S + M 
Sbjct: 4   TWFDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIHSMSKMA 63

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            + P++ E+++K+K    + LQ+ M++LY+    NP AGCWP+L+Q+P+ F++Y V    
Sbjct: 64  EVAPRLQEIQQKYKN-DQKKLQEEMLKLYQETGYNPAAGCWPLLIQMPILFSLYYVFQNP 122

Query: 451 LEMRHAPFWGWIKDLAAA-----------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           L         ++KDL              D      L             + + PI+ + 
Sbjct: 123 LVYVLGKSHQYVKDLVTGATGYAITQRIVDEAQKLGLDMHFLGINLAKKELLVLPILSAA 182

Query: 500 SMFI--------QMKMSPPPADKGQAMI--------LNWMPVVFVFALSSFPAGLIIYWS 543
           +M +        Q K +P  +      +        + + P++  F     P+GL++YW+
Sbjct: 183 TMLLSVWFSSNSQKKFNPQYSQSQSNAMAESINKSFMIFSPLMSYFIALQVPSGLVLYWT 242

Query: 544 WSNVISIVQQAVIM 557
            +N+ +I+QQ +  
Sbjct: 243 VTNLFTILQQFIAN 256


>gi|331698376|ref|YP_004334615.1| membrane protein [Pseudonocardia dioxanivorans CB1190]
 gi|326953065|gb|AEA26762.1| membrane protein insertase, YidC/Oxa1 family [Pseudonocardia
           dioxanivorans CB1190]
          Length = 391

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 102/280 (36%), Gaps = 55/280 (19%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            F         +F  +   +++         + ++++   + ++ +       Q  S   
Sbjct: 3   NFLYYPVSAVMWFWHQAFALVLGPSSGFA--WALSVVFLVLTLRAIMIKPFLSQVRSGRR 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ + P++ E+R++      Q +     +L K H ++ L GC P+L+Q+PVF A+  V+ 
Sbjct: 61  MRALAPQLAEIRKRHANDK-QKMLAETQKLQKEHGVSTLGGCLPLLIQMPVFLALLHVLR 119

Query: 449 I------SLE----------------------MRHAPFWGWIKDLAAADPTNIFTLFGIL 480
                  + E                      +  AP   W+       P ++   FG  
Sbjct: 120 YFNRPGLTFEQNAAIGNYVFGPDEVRSFLEARLFGAPLSSWVSM-----PQSLLDSFGSH 174

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSP--------PPADK-GQAMILN-WM---PVVF 527
                  +      ++ +++  I  + S          P +   QA  +  +M   P +F
Sbjct: 175 VERWEVVVVAVPLMLLAAVATHITARNSQRQQLAAQTAPPEPGTQAAQMAGFMKLTPWIF 234

Query: 528 ------VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
                      +FP  +++YW  +N  ++VQQ ++ K   
Sbjct: 235 PLGVILGGLFFTFPIAILLYWLTNNGWTMVQQHLVHKAMD 274


>gi|322388371|ref|ZP_08061974.1| stage III sporulation protein J [Streptococcus infantis ATCC
           700779]
 gi|321140684|gb|EFX36186.1| stage III sporulation protein J [Streptococcus infantis ATCC
           700779]
          Length = 271

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 109/257 (42%), Gaps = 31/257 (12%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+  D   F+      F     F +   + G+ I+L TV ++ +  P+ + Q V++  M+
Sbjct: 25  EVSADSADFWSNLVYFFAETIRFLSFDVSIGLGIILFTVLIRTILLPVFQTQMVASRKMQ 84

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP I ELRE++     +    L +   +L+K   I   A  WP+L+Q+P+  A+++ +
Sbjct: 85  EAQPLIKELRERYPGRDMESRTKLDQETRKLFKELGIKQSASFWPLLIQMPILLALFQAL 144

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + W  +L  AD T                    + PI+ +L  F+   +
Sbjct: 145 SN-VDFLKTGHFLWF-NLGGADTTF-------------------VLPILAALFTFLSSWL 183

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           S       +     ++  MPV+  F   S P+G+ +YW+ SN   + Q  ++        
Sbjct: 184 SNKALPEKNGAMTGMMYGMPVIIFFFAISAPSGVALYWAVSNAYQVFQTYLLN----NPF 239

Query: 565 GLIDRLRSTFSKNYNSQ 581
            +I+   +      + +
Sbjct: 240 KIIEEREADVKAKKDLE 256


>gi|163845720|ref|YP_001633764.1| 60 kDa inner membrane insertion protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222523425|ref|YP_002567895.1| 60 kDa inner membrane insertion protein [Chloroflexus sp. Y-400-fl]
 gi|163667009|gb|ABY33375.1| 60 kDa inner membrane insertion protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222447304|gb|ACM51570.1| 60 kDa inner membrane insertion protein [Chloroflexus sp. Y-400-fl]
          Length = 314

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 15/234 (6%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
              +      +  L+ +F +L GN  + I+L T+  +L   PL      S+  M+ +QP 
Sbjct: 1   MNIWSAFVGLLEQLLLFFSSLTGNMALGIVLFTIAARLFILPLTLSSLRSSRRMQEVQPI 60

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEM 453
           + E++ K+    PQ LQ+  +++Y+ H INP+ GC P+LLQ+P+FF +Y+ +      E 
Sbjct: 61  LKEIQRKY-GKDPQRLQEETLRVYREHKINPVGGCLPLLLQLPIFFGVYQAVYHLMVPEQ 119

Query: 454 R-----HAPFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGIWPIIMSLSMFIQM 505
           R      A      + LA       F +   +P + P         I P++  +   +Q 
Sbjct: 120 RVNLSAAAAEMLKDERLAQILAAPFFGMDLGVPAFGPNGFAGFAYLILPVLSIVLQLMQQ 179

Query: 506 KM-SPPPADKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
            M +P   D  Q      +  MP VF +   +FP G ++YW  S+V+ +VQQ  
Sbjct: 180 LMATPRVQDPQQKAFTQAMLIMPFVFGYIAFTFPTGAVLYWVVSSVVGVVQQYF 233


>gi|300362682|ref|ZP_07058858.1| stage III sporulation protein J [Lactobacillus gasseri JV-V03]
 gi|300353673|gb|EFJ69545.1| stage III sporulation protein J [Lactobacillus gasseri JV-V03]
          Length = 291

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 21/239 (8%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           +W   Y +      ++     +  ++G AI++ T+ V+++  PL      S A  + +QP
Sbjct: 46  NWWDRYIVYYISQFILWIASLVRDSYGWAIIIFTIIVRIILLPLNAISIKSMAKQQKVQP 105

Query: 395 KIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           ++D LR+K+        Q LQ+   +LYK   INP  GC P+L+Q+PV +A+Y+ I  + 
Sbjct: 106 QMDALRKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTP 165

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           ++     + W+ DL   DP  I       P     F  +         S +I    +P  
Sbjct: 166 QL-QNGRFLWM-DLGRPDPYYIM------PVLAAAFTFI---------STYISQMSTPQS 208

Query: 512 ADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           +  G    + + MP++   +     + + +YW  SN+  +VQ  ++      +  L ++
Sbjct: 209 SQNGMTKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFILQNPFKYQRELEEQ 267


>gi|170783400|ref|YP_001711734.1| putative inner membrane protein translocase component YidC
           [Clavibacter michiganensis subsp. sepedonicus]
 gi|169157970|emb|CAQ03180.1| membrane insertion protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 320

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 108/251 (43%), Gaps = 28/251 (11%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
                    ++  +    +    + ++I+   + V+    P+  +Q  +   M  + P++
Sbjct: 16  ELILVGFHTLWTTLGLDPDNGATWVLSIVGLVLVVRAALIPIFVRQIKNQRRMMEVVPQL 75

Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL- 451
            ++++K+K    Q     + +  + LYK    NPL+ C P+LLQ+P+FF++Y V+  +  
Sbjct: 76  KKIQDKYKGKRDQFSREAMSRETMALYKDTGTNPLSSCLPLLLQMPIFFSLYSVLHRAAV 135

Query: 452 -EMRH--------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            E+          +  +G    L A   + I T  G +   +     V    I+MS S F
Sbjct: 136 EELPGIGLLNEQLSRSFGESSFLGAPLQSAISTANGNITVIVIATTMV----ILMSASQF 191

Query: 503 IQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           I                 P  K Q ++L  +P+VF  +  +FP G++ YW  SN  ++ Q
Sbjct: 192 ITQLQIMAKNMSEETKASPMFKQQRILLYILPLVFAVSGIAFPLGVMFYWLVSNFWTMGQ 251

Query: 553 QAVIMKMHGAE 563
           Q ++++     
Sbjct: 252 QFLVIRNMPTP 262


>gi|256398143|ref|YP_003119707.1| hypothetical protein Caci_9053 [Catenulispora acidiphila DSM 44928]
 gi|256364369|gb|ACU77866.1| 60 kDa inner membrane insertion protein [Catenulispora acidiphila
           DSM 44928]
          Length = 328

 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 62/283 (21%), Positives = 114/283 (40%), Gaps = 40/283 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
              +I    F  +         +  +   ++ +AI+  T+ ++    PL +KQ  S  NM
Sbjct: 6   LSPIIWATSFVMMLWHRAFGAIFGSDSSASWVLAIIFLTITIRAAMIPLFRKQIKSMQNM 65

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP+I  L++K+K    Q LQ+ M++LYK +  +P A C PILLQ P F  +Y+V+S 
Sbjct: 66  QRLQPQIQALQKKYKLDK-QKLQQEMMKLYKDNGTSPFASCMPILLQTPFFMGLYRVLS- 123

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTL-FGILPFYLPGFMHVGIWPIIMSLS-------- 500
                H      +  L+ +D  +     F   P  L    H       + ++        
Sbjct: 124 -----HVSAGNAVGALSQSDSVSAMHASFFGAPLSLSFLHHTPAQMSRIGVTSVTNLQII 178

Query: 501 -----------MFIQMKMSPP-----------PADKGQAMILNWMPVVFVFALSSFPAGL 538
                       F+  +M              P  + Q ++L  MP   +F   +   G+
Sbjct: 179 AIIMAIIYATSQFLTQRMMMAKNTNLDNSVPNPMMQSQKIMLYVMPFGMLFFSLNVQIGV 238

Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           ++Y   +NV +I QQ   ++         +  +  F++N   +
Sbjct: 239 VLYLMTTNVWTIGQQFYTLRNSPMPGSQAE--KEMFARNKAKE 279


>gi|32307520|gb|AAP79165.1| plastid membrane protein albino 3 [Bigelowiella natans]
          Length = 440

 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 11/228 (4%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            + G++I+L TVFVKLL FPL ++Q   T  M  IQPKI E++ K+K  P +   + +  
Sbjct: 151 QSIGLSIVLFTVFVKLLTFPLNEQQIKGTERMGIIQPKIKEIQAKYKDDPNK-SAEKLQS 209

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAAAD--PTNIF 474
           +Y  + +NPLAG  P   QIP+F A+Y+ +            + W+ +L      P    
Sbjct: 210 VYAENQVNPLAGLLPAFAQIPIFIALYRALQNLATDGQMNQPFLWLPNLEGPTFGPIGTN 269

Query: 475 TLF-----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-KGQAMILNWMPVVFV 528
            LF     G+  +           PI +  S  +  ++         Q     ++P++F 
Sbjct: 270 WLFTGFHDGVPQYGWHDTAAYLSLPIFLIFSQIVSQRLLVSKEQYDAQPQWTKFLPIIFG 329

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
           +   + P+GL +YW  +N+++      + +    +  ++  LR   SK
Sbjct: 330 YFSLNVPSGLAVYWVANNIVTTGTNIALKQKFKNDPEVVA-LRERISK 376


>gi|126278077|ref|XP_001379890.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 518

 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 79/213 (37%), Gaps = 35/213 (16%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415
           L   +  AI+  TV  +++ FPL  K       + N  P+I +   +  ++     +   
Sbjct: 219 LGLPWWGAIVTCTVVARIMIFPLIVKGQREAVKINNHMPEIQKFSTRMNEAKLSGDKFEF 278

Query: 416 IQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKD 464
            +         K H+++PL G    L Q PVF + +  +     +           W +D
Sbjct: 279 SRAFSELQLYQKKHDVSPLRGFIVPLAQAPVFISFFIALREMAYLPVPSMQNGGLWWFQD 338

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK-----GQAMI 519
           L AADP                       P++++ SM+  +++                +
Sbjct: 339 LTAADPLY-------------------ALPLLVTASMWAILELGAETGVNNANLRMMKTV 379

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
              +P++ +    +FP  +  YW  SN+ S+ Q
Sbjct: 380 FRVLPLIVLPFTINFPTAVFTYWFSSNLFSLAQ 412


>gi|317499291|ref|ZP_07957564.1| YidC/Oxa1 family membrane protein insertase [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|316893460|gb|EFV15669.1| YidC/Oxa1 family membrane protein insertase [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 336

 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 103/269 (38%), Gaps = 21/269 (7%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +    +        +      F +I + ++  ++       N G+ I+L T+  KL+  
Sbjct: 5   MLLAQAQQSTGNGGILAPFVIIFGWIIRAIYDGLAAMGIY--NVGLCIILFTLVSKLILL 62

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWP 432
           P+  KQ  S    +++QP+I+++ +K++    Q      Q+ M ++Y  +  +P  GC P
Sbjct: 63  PVTMKQQRSMKINQHMQPEINKITKKYRNKRDQASMMKQQEEMQKVYAKYGSSPTGGCLP 122

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
            L+Q P+  A+Y VI      R    +            N+F    +          + I
Sbjct: 123 TLIQFPIIMALYYVI------RGVNTYIPQIARDVQFKPNLFLGMDLNSAPGFRLTPLLI 176

Query: 493 WPIIMSLSMFIQMKMSPPPADK--------GQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
            P++  +  F+  K S                  ++  MP++      S P G+ +YWS 
Sbjct: 177 IPVLSFIFQFLSAKTSMSTTQMDDSTPGAGMTKSMMYTMPLMSFVMCISLPIGIGLYWSA 236

Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           S +   +QQ      H     +   +  +
Sbjct: 237 SALFQYIQQVAFN-YHYDHADMDKIIEKS 264


>gi|157149832|ref|YP_001449500.1| membrane protein oxaA 1 precursor [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157074626|gb|ABV09309.1| Membrane protein oxaA 1 precursor [Streptococcus gordonii str.
           Challis substr. CH1]
          Length = 271

 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 29/257 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+       +      F     F +  G+ GI I+L T+ ++ +  P+ + Q  S+  M+
Sbjct: 25  EVTSQSTDLWEKFVYFFAETIRFLSFNGSTGIGIILFTIIIRTVLLPVFQIQMTSSRKMQ 84

Query: 391 NIQPKIDELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP I  L+ K+     +          +LYK   +NPLA   P+ +Q+PV  A+Y+ +
Sbjct: 85  EAQPHIKALQAKYPGKDMESRNLLATETQKLYKELGVNPLASFIPLFVQMPVLIALYQAL 144

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +    +R    + W+ +LA  DP                     I P++ +L  F+   +
Sbjct: 145 TRVAFLR-TGHFLWL-NLAETDPYY-------------------ILPVLAALFTFLSTWL 183

Query: 508 SP---PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--KMHGA 562
           +       +    ++   MP++  +   +F +G+ +YW+ SN   + Q  V+       A
Sbjct: 184 NNKGLAERNGAMTVMTYLMPLMIFWFALTFSSGVALYWTVSNAYQVGQTLVLSNPFKMIA 243

Query: 563 EIGLIDRLRSTFSKNYN 579
           E            +   
Sbjct: 244 EREAKLNAAREQEEKKK 260


>gi|257437741|ref|ZP_05613496.1| stage III sporulation protein J [Faecalibacterium prausnitzii
           A2-165]
 gi|257200048|gb|EEU98332.1| stage III sporulation protein J [Faecalibacterium prausnitzii
           A2-165]
          Length = 360

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 58/297 (19%), Positives = 118/297 (39%), Gaps = 54/297 (18%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
               Y +  P+  +M + Y L+ N+G  I+L T+ + ++  PL   Q  S A M   QP 
Sbjct: 5   MNPLYILGWPLGYVMEWIYKLIPNYGWDIILFTLLITVIKIPLQLNQQKSMARMSAFQPM 64

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--- 452
           + E+++K++   P+  Q+ +++L +     P AGC P+L+   V F + +V+   L+   
Sbjct: 65  VAEIQKKYRD-KPEKQQEELMKL-QEQGYKPTAGCMPMLVNFLVMFGVIEVVYRPLQRIF 122

Query: 453 ------MRHAPFWGWIKDLA-------------------------AADPT-------NIF 474
                 +  A        ++                           D            
Sbjct: 123 HIGADALTAAGEALTAMGISFTTVTRDTNIIAQVISGESTVSSCFTPDQVATITEFGQHM 182

Query: 475 TLFGILPFYLPGF------MHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMI---LNWMP 524
             FGI    +P +      + + I P++  ++MF+   +S      + Q  +   +  MP
Sbjct: 183 DFFGIDLTRVPQYSLAAENLPLLILPVLAIVTMFLSTHISMKASGQEMQGSMKLTMYMMP 242

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +++VF   + P+   +Y+  SN++  VQ  ++MK       +   + +  +     Q
Sbjct: 243 LMYVFFCFTVPSAFSLYYVVSNILMTVQS-LLMKKIYDPEKMKAEVAAEMAARKKEQ 298


>gi|322391229|ref|ZP_08064701.1| stage III sporulation protein J [Streptococcus peroris ATCC 700780]
 gi|321145982|gb|EFX41371.1| stage III sporulation protein J [Streptococcus peroris ATCC 700780]
          Length = 271

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 110/257 (42%), Gaps = 31/257 (12%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+  D   F+      F +   F +   + G+ I+L TV ++ +  P+ + Q V++  M+
Sbjct: 25  EVSADSADFWSKLVYFFAVTIRFLSFDISIGLGIILFTVLIRTILLPVFQTQMVASRKMQ 84

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I ELRE++     +    L +   +L+K   I   A  WP+L+Q+P+  A+++ +
Sbjct: 85  EAQPRIKELRERYPGRDMESRTKLDQETRKLFKELGIKQSATFWPLLIQMPILLALFQAL 144

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + W  +L  AD T                    + PI+ +L  F    +
Sbjct: 145 SN-VDFLKTGHFLWF-NLGGADTTF-------------------VLPILAALFTFFSSWL 183

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           S       +     ++  MPV+  F   S P+G+ +YW+ SN   ++Q  ++        
Sbjct: 184 SNKALPEKNAAMTGMMYGMPVIIFFFAISAPSGVALYWAVSNAYQVLQTYLLN----NPF 239

Query: 565 GLIDRLRSTFSKNYNSQ 581
            +I    +      + +
Sbjct: 240 KIIAEREADLQAKKDLE 256


>gi|302872912|ref|YP_003841548.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575771|gb|ADL43562.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 341

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 34/254 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
            W  F+A P+  L+   Y+ +       ++GIA++L T+ V+ L  PL  KQ  S + M 
Sbjct: 4   TWLDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIHSMSKMA 63

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            + P++ E+++K+K    + LQ+ M++LY+    NP AGCWP+L+Q+P+ F++Y V    
Sbjct: 64  EVAPRLQEIQQKYKN-DQKKLQEEMLKLYQETGYNPAAGCWPLLIQMPILFSLYYVFQNP 122

Query: 451 LEMRHAPFWGWIKDLAAA-----------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           L         +++DL              D      L             + + PI+ + 
Sbjct: 123 LVYVLGKSHQYVRDLVTGATGYGITQRIVDEAQKLGLDMHFLGINLAKKELLVLPILSAA 182

Query: 500 SMFIQ----------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
           +M +                    S   A+      +   P++  F     P+GL++YW+
Sbjct: 183 TMLLSVWFSSNSQKKFNPQYSQSQSNAMAESMNRSFMIISPLMSYFIALQVPSGLVLYWT 242

Query: 544 WSNVISIVQQAVIM 557
            +N+ +I+QQ V  
Sbjct: 243 VTNLFTILQQFVAN 256


>gi|225869761|ref|YP_002745708.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. equi
           4047]
 gi|225699165|emb|CAW92392.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. equi
           4047]
          Length = 275

 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+       +      F     + +  G+ GI I+L T+ ++LL  PL   Q  S   M+
Sbjct: 30  EVTAQSSSSWEQLVYFFAKAIQWLSFDGSTGIGIILFTIMIRLLLLPLFNMQIKSGQKMQ 89

Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           +IQP++  L++K+          L +    LYK + +NP     P+L+Q+PV FA+++ +
Sbjct: 90  DIQPELKALQKKYAAKDTATRMKLAEESQALYKKYGVNPYMSLLPLLIQMPVMFALFQSL 149

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +    +R    + W++ LA  D                   H+ I PI+ ++  F+   +
Sbjct: 150 TRVAFLR-EGTFLWVE-LARHD-------------------HLFILPILAAVFTFLSTWL 188

Query: 508 SPPPADKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +   A +  AM   +   MPV   F   +  +G+++YW+ SN   +VQ  +  
Sbjct: 189 TNLAAREKTAMITIMTYVMPVFIFFMGFNLASGVVLYWAVSNAFQVVQLLLFN 241


>gi|260662535|ref|ZP_05863430.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN]
 gi|260553226|gb|EEX26169.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN]
          Length = 259

 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 102/235 (43%), Gaps = 27/235 (11%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W ++I       + +  N+ G +G+ I++ T+ ++++  P+   Q  S    + + P++
Sbjct: 18  IWDHYIVYNCSRFIIWLSNIFGGYGMGIIIFTIIIRIIILPMMFYQTKSMMKTQELAPQL 77

Query: 397 DELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
             L++K+     + +Q+      +LYK   +NP A   P+L+Q+PV +A+Y+ I  + ++
Sbjct: 78  KALQKKYSSKDRETMQQLQIEQQKLYKEAGVNPFASMLPLLIQLPVMWALYQAIWRTAQL 137

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512
           +    + W++ L   DP                     + PI+ ++  FI   +S     
Sbjct: 138 K-TGTFLWLQ-LGHTDPYF-------------------VLPILAAVFTFISSWLSMASMP 176

Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             +     +   MP++  F    F A + +YW  +N   +VQ  VI         
Sbjct: 177 EKNSMTTTMTWVMPIMIFFMALQFSAAITLYWVVTNAFQVVQTLVIQNPFKIRRE 231


>gi|139474368|ref|YP_001129084.1| OxaA-like protein precursor [Streptococcus pyogenes str. Manfredo]
 gi|134272615|emb|CAM30882.1| membrane protein OxaA 2 precursor [Streptococcus pyogenes str.
           Manfredo]
          Length = 307

 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 31/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +  + +    T      +P    +++   Q      Q  ++   + H INPL   GC P
Sbjct: 83  SWKASYQSEKMTFLKPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +L+Q+P F A+Y     +  +  + F G   DL +                        +
Sbjct: 143 LLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR---------------------SLV 179

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
              I++   F Q  +S     + Q      ++  MP++ +F   S PAG+ +YW      
Sbjct: 180 LTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFF 239

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           SI+QQ +    +  +  L  +++  ++K    
Sbjct: 240 SIIQQLITT--YLLKPRLHKQIKEEYAKTPPK 269


>gi|168183723|ref|ZP_02618387.1| membrane protein OxaA [Clostridium botulinum Bf]
 gi|237797102|ref|YP_002864654.1| putative inner membrane protein translocase component YidC
           [Clostridium botulinum Ba4 str. 657]
 gi|182673143|gb|EDT85104.1| membrane protein OxaA [Clostridium botulinum Bf]
 gi|229260568|gb|ACQ51601.1| putative sporulation protein/membrane protein insertase, OxaA
           family [Clostridium botulinum Ba4 str. 657]
          Length = 217

 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 31/238 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +  F       + +   N   ++GIAI+L T+ ++LL  PL  KQ  S+  M  +QP+I 
Sbjct: 8   FVQFFKFIHGAVSNVISNPNFSYGIAIILVTLIIRLLILPLNIKQTKSSLRMNELQPEIK 67

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L+ K+K   PQ L +  ++LYK   +NPL GC P+L+Q P+F A+Y V +    +    
Sbjct: 68  KLQAKYKN-DPQRLNQKTMELYKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTGINGIS 126

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-- 515
            + W+KDLA  D                      +  ++   + +    +   P +    
Sbjct: 127 -FLWVKDLAKPD---------------------VVLAVLSGATTYFSGTLMTSPDNSQAG 164

Query: 516 QAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           Q   +N  M +  +       + L++YW  +N+I I+Q  VIMK       L  ++ +
Sbjct: 165 QMKSMNIGMSIFMIVISWKLKSALVLYWVINNLIQIIQT-VIMKKM----ELRGKVEA 217


>gi|125718923|ref|YP_001036056.1| membrane protein (preprotein translocase) oxaA 1 precursor
           [Streptococcus sanguinis SK36]
 gi|323350582|ref|ZP_08086244.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis
           VMC66]
 gi|125498840|gb|ABN45506.1| Membrane protein (preprotein translocase) oxaA 1 precursor,
           putative [Streptococcus sanguinis SK36]
 gi|322123264|gb|EFX94949.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis
           VMC66]
 gi|324992539|gb|EGC24460.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis
           SK405]
 gi|324995932|gb|EGC27843.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis
           SK678]
 gi|325697377|gb|EGD39263.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis
           SK160]
 gi|327488846|gb|EGF20645.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis
           SK1058]
          Length = 271

 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 29/232 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409
            F +  G+ GI I+L T+ ++ +  P+ + Q  S+  ++ +QP I  L+EK+     +  
Sbjct: 46  RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESR 105

Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L +   +LYK   +NP A   P+ +Q+PV  A+++ ++  ++      + W+ +L A 
Sbjct: 106 TALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525
           DPT                    I P++ +L  F    +S       + G  +++  MPV
Sbjct: 164 DPTF-------------------ILPLLAALFTFFSTWLSNKALPERNGGMTVMMYLMPV 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           V  F      +G+ +YW+ SN   +VQ  ++   +  +I      +    + 
Sbjct: 205 VIFFFALYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254


>gi|225869297|ref|YP_002745245.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp.
           zooepidemicus]
 gi|225702573|emb|CAX00574.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp.
           zooepidemicus]
          Length = 275

 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+       +      F     + +  G+ GI I+L T+ ++LL  PL   Q  S   M+
Sbjct: 30  EVTAQSSSSWEQLVYFFAKAIQWLSFDGSTGIGIILFTIMIRLLLLPLFNMQIKSGQKMQ 89

Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           +IQP++  L++K+          L +    LYK + +NP     P+L+Q+PV FA+++ +
Sbjct: 90  DIQPELKALQKKYAAKDTATRMKLAEESQALYKKYGVNPYMSLLPLLIQMPVMFALFQSL 149

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +    +R    + W++ LA  D                   H+ I PI+ ++  F+   +
Sbjct: 150 TRVAFLR-EGTFLWVE-LARHD-------------------HLFILPILAAVFTFLSTWL 188

Query: 508 SPPPADKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +   A +  AM   +   MP+   F   +  +G+++YW+ SN   +VQ  +  
Sbjct: 189 TNLAAREKTAMITIMTYVMPIFIFFMGFNLASGVVLYWAVSNAFQVVQLLLFN 241


>gi|315605512|ref|ZP_07880549.1| stage III sporulation protein J [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315312779|gb|EFU60859.1| stage III sporulation protein J [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 447

 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 122/264 (46%), Gaps = 33/264 (12%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F   I + W +     + +L+ +       + ++I+L TV V++   PL  KQ  S+  M
Sbjct: 9   FAWAISYLWVWI--HDLLVLLGFSSGSGVAWVLSIVLLTVLVRIAIIPLFLKQIRSSRAM 66

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + IQP++ +++EK+K    Q  ++ M++    L + H ++P A C P+L+Q+PV F +Y+
Sbjct: 67  QAIQPEMRKIQEKYKGKKDQASRQKMMEETQALQRKHKVSPFASCLPMLVQMPVLFGMYR 126

Query: 446 VI-------SISLEMRHAPFWGWIKDLAAADPTNIFT--LFGIL-------PFYLP-GFM 488
            I       + +   R       +  L A+  + I    +FG+         F  P    
Sbjct: 127 AIIAVSSIANGTYTYRGEST-DHLGPLNASVSSEIVNSTVFGVPLSHTLRDSFDQPMAVA 185

Query: 489 HVGIWPIIMSLSMFIQMKM----SPP-----PADKGQAMILNWMPVVFVFALSSFPAGLI 539
                 ++M +  F+ M+M    + P     P  + Q  ++  MP++F+F+   F  G++
Sbjct: 186 VFVAAIVMMVVLQFVSMRMSFSRNMPDMGDNPMAQSQRSMMYVMPLMFIFSGVFFQMGVV 245

Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563
           IY   ++V ++ Q    +K+    
Sbjct: 246 IYTVTASVWALAQAYWTIKVMPTP 269


>gi|94993686|ref|YP_601784.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS10750]
 gi|94547194|gb|ABF37240.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS10750]
          Length = 307

 Score =  110 bits (274), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 31/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +  + +    T      +P    +++   Q      Q  ++   + H INPL   GC P
Sbjct: 83  SWKASYQSEKMTFLKPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +L+Q+P F A+Y     +  +  + F G   DL +                        +
Sbjct: 143 LLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR---------------------SLV 179

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
              I++   F Q  +S     + Q      ++  MP++ +F   S PAG+ +YW      
Sbjct: 180 LTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFF 239

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           SI+QQ +    +  +  L  +++  ++K    
Sbjct: 240 SIIQQLITT--YLLKPRLHKQIKEEYAKTPPK 269


>gi|146297758|ref|YP_001181529.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145411334|gb|ABP68338.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 349

 Score =  110 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 34/254 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
            W  F+A P+  L+   Y+ +       ++GIAI+L T+ V+ L  PL  KQ  ST+ M 
Sbjct: 4   TWLDFLAIPLGRLLKLIYDFLHGANIPGSYGIAIILLTLIVRGLLLPLYIKQIASTSKMA 63

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            + P+I E+++K+K    ++ Q+ M++LY+    NP +GCWP+L+QIP+ FA+Y V    
Sbjct: 64  EVAPRIQEIQQKYKGDQRKM-QEEMLKLYQETGYNPASGCWPLLVQIPILFALYYVFQNP 122

Query: 451 LEMRHAPFWGWIKDLAA-----ADPTNIFTLFGILPFYLPGFMH------VGIWPIIMSL 499
           L         +++DL       A    I      L   +  F        + + PI+ + 
Sbjct: 123 LVYVLGKTHQYVRDLVQGKAGYAITQTIINEAQKLGLDMHFFGINLAQKELIVLPILSAA 182

Query: 500 SMFIQ----------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
           +MF+                    S   A+     ++ + P++  F     PAGL++YW+
Sbjct: 183 TMFLSIWFSTNSQKRFNPQYAQSQSNAMAEGMNRTMMIFSPLMSYFIALQVPAGLVVYWT 242

Query: 544 WSNVISIVQQAVIM 557
            +N+ SI+QQ +  
Sbjct: 243 VTNLFSILQQFIAN 256


>gi|160944271|ref|ZP_02091500.1| hypothetical protein FAEPRAM212_01780 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444453|gb|EDP21457.1| hypothetical protein FAEPRAM212_01780 [Faecalibacterium prausnitzii
           M21/2]
          Length = 357

 Score =  110 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 57/295 (19%), Positives = 113/295 (38%), Gaps = 49/295 (16%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
               +FY ++ P+  +M + Y L+ N+G  I+L T+ + ++  PL   Q  S A M   Q
Sbjct: 3   KGMNFFYILSGPLGYVMEWIYKLLPNYGWDIILFTLLINIVKIPLQTSQQKSMAKMSAFQ 62

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE- 452
           P I E++ K+K   P+  Q+ +++L +     P AGC P+LL   V   +  V+   LE 
Sbjct: 63  PMIAEIQTKYKN-KPEKQQEELMKLQQDFGYKPTAGCVPMLLNFLVMLGVIGVVYNPLER 121

Query: 453 MRH----------------------------------APFWGWIKDLAAADPTNIFTLFG 478
           + H                                  A   G +   +      I     
Sbjct: 122 IFHISAAALASAGEAMTAAGISFTAITRDTNIIAEVLAGNSGVLGCFSVEQIATITEFGQ 181

Query: 479 ILPFYLPGFMHVG--------IWPIIMSLSMFIQMKMSP-PPADKGQAMI---LNWMPVV 526
            + F       +         + P++  ++MF+   +S      + Q  +   +  MP++
Sbjct: 182 HMNFLGIDLTRIPKLGLSLDIVLPLLSVITMFLSTHISMKASGQQMQGSMKLTMYMMPLM 241

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           ++F   +FP    +Y+  SN++   Q   +M+       +   + +  +     +
Sbjct: 242 YLFFCFTFPLAFSLYYVISNIVMTAQTQ-VMRKFYDPEKMRKEVEAEIAAKRKQE 295


>gi|261368848|ref|ZP_05981731.1| stage III sporulation protein J [Subdoligranulum variabile DSM
           15176]
 gi|282569122|gb|EFB74657.1| stage III sporulation protein J [Subdoligranulum variabile DSM
           15176]
          Length = 339

 Score =  110 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 75/273 (27%), Positives = 125/273 (45%), Gaps = 46/273 (16%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
               YF+A  +  L+   YNL+GN+   +++ T+ +KLL FPLA  Q  STA M   QP 
Sbjct: 1   MQILYFLAILIGPLVKVLYNLIGNYAATMIVATLILKLLLFPLAIHQQKSTAKMSVFQPL 60

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL---- 451
           ++E+++K+K +P +  Q+ M++L + H  NP+AGC P+LL + V F    V+   +    
Sbjct: 61  MNEIQQKYKNNPEK-QQEEMMKLQQEHGFNPMAGCLPMLLTMLVLFGFLGVVYYPVHYIF 119

Query: 452 -----EMRHA----------------PFWGWIKDLAAADPTNIFT------------LFG 478
                 +R A                     I + A  DP+ I               FG
Sbjct: 120 GVSDAAVRQACETLGLATANATTMQTSLIQAIHNGAVIDPSIISADVVNEIKNFNTVFFG 179

Query: 479 ILPFYLPGF--MHVGIWPIIMSLSMFI----QMKMSPP--PADKGQAMILNWMPVVFVFA 530
           +    +PGF    + I+PII +++M +      K+S           +++  M ++FV  
Sbjct: 180 MDMCDIPGFNLTPIAIFPIIAAVTMILSYIFTQKLSGMGSQMQGSMKVMMWVMNLMFVSF 239

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             + P G  +Y+  SN+  I Q  V  K++  E
Sbjct: 240 CFNAPVGFSLYYGVSNLFQIGQSFVTYKIYSPE 272


>gi|170760805|ref|YP_001788987.1| putative inner membrane protein translocase component YidC
           [Clostridium botulinum A3 str. Loch Maree]
 gi|169407794|gb|ACA56205.1| putative sporulation protein/membrane protein insertase, OxaA
           family [Clostridium botulinum A3 str. Loch Maree]
          Length = 217

 Score =  110 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 31/238 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +  F       + +   N   ++GIAI+L T+ ++LL  PL  KQ  S+  M  +QP+I 
Sbjct: 8   FVQFFKFIHGAVSNVISNPNFSYGIAIILVTLIIRLLILPLNIKQTKSSLRMNELQPEIK 67

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L+ K+K   PQ L +  ++LYK   +NPL GC P+L+Q P+F A+Y V +    +    
Sbjct: 68  KLQAKYKN-DPQKLNQKTMELYKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTGINGIS 126

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-- 515
            + W+KDLA  D                      +  ++   + +    +   P +    
Sbjct: 127 -FLWVKDLAKPD---------------------VVLAVLSGATTYFSGTLMTSPDNSQAG 164

Query: 516 QAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           Q   +N  M +  +       + L++YW  +N+I I+Q  VIMK       L  ++ +
Sbjct: 165 QMKSMNIGMSIFMIVISWKLKSALVLYWVINNLIQIIQT-VIMKKM----ELRGKVEA 217


>gi|187777370|ref|ZP_02993843.1| hypothetical protein CLOSPO_00926 [Clostridium sporogenes ATCC
           15579]
 gi|187774298|gb|EDU38100.1| hypothetical protein CLOSPO_00926 [Clostridium sporogenes ATCC
           15579]
          Length = 217

 Score =  110 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 29/227 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +  F A     + +   N   ++GIAI+L T+ ++LL  PL  KQ  S+  M  +QP+I 
Sbjct: 8   FVQFFAFIHAAVSNVISNPNFSYGIAIILVTLIIRLLILPLNIKQTKSSLRMNELQPEIK 67

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L+ K+K   PQ L +  ++LYK   +NPL GC P+L+Q P+F A+Y V +    +    
Sbjct: 68  KLQAKYKN-DPQRLNQKTMELYKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTGINGVS 126

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + W+KDLA  D                      +  ++   + +    +     D  QA
Sbjct: 127 -FLWVKDLAKPD---------------------VVLAVLSGATTYFSGTL-MASGDSSQA 163

Query: 518 MILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
             +      M +  +       + L++YW  +N+I I+Q  VIMK  
Sbjct: 164 GQMKSMNIGMSIFMIVISWKLKSALVLYWVINNLIQIIQT-VIMKKM 209


>gi|332523606|ref|ZP_08399858.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           porcinus str. Jelinkova 176]
 gi|332314870|gb|EGJ27855.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           porcinus str. Jelinkova 176]
          Length = 297

 Score =  110 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 74/210 (35%), Gaps = 31/210 (14%)

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPIL 434
             + +            P    ++    Q      Q  ++   K + IN L   GC P+L
Sbjct: 73  KASYQSEKMAYLKPVFDPINQRVKNATTQEEKFAAQSELMAAQKENGINMLGGMGCLPLL 132

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P F A+Y     +  +     +  I DL +                        I  
Sbjct: 133 IQMPFFSAMYFAALHTKGI-STSHFLGI-DLGSK---------------------SLILT 169

Query: 495 IIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
            I+++  F Q  +S     + Q      ++  MP++ +F   + PAG+ +YW      SI
Sbjct: 170 AIIAVLYFFQSWLSMQAVAEEQRAQMKTMMYTMPIMMIFMTMTLPAGVGLYWLVGGFFSI 229

Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           +QQ +    +  +  L  ++   F  N   
Sbjct: 230 IQQLITT--YFIKPKLRQQIEEEFKNNPPK 257


>gi|325695448|gb|EGD37348.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis
           SK150]
          Length = 271

 Score =  110 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 105/232 (45%), Gaps = 29/232 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409
            F +  G+ GI I+L T+ ++ +  P+ + Q  S+  ++ +QP I +L+EK+     +  
Sbjct: 46  RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESR 105

Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L +   +LYK   +NP A   P+ +Q+PV  A+++ ++  ++      + W+ +L A 
Sbjct: 106 TALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525
           DPT                    I P++ +L  F    +S       + G  +++  MPV
Sbjct: 164 DPTF-------------------ILPLLAALFTFFSTWLSNKALPERNGGMTVMMYLMPV 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           V  F      +G+ +YW+ SN   +VQ  ++   +  +I      +    + 
Sbjct: 205 VIFFFAFYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254


>gi|251799884|ref|YP_003014615.1| hypothetical protein Pjdr2_5925 [Paenibacillus sp. JDR-2]
 gi|247547510|gb|ACT04529.1| 60 kDa inner membrane insertion protein [Paenibacillus sp. JDR-2]
          Length = 272

 Score =  110 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 110/237 (46%), Gaps = 36/237 (15%)

Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----I 392
           + +++  P   L+ +  +    ++G+A+++ T+ V+++  PL  +QY     MK     I
Sbjct: 43  FNHYVVFPFSYLIQHIASFFGDSYGMAVIVMTLLVRIVLLPLMLRQYKGQQGMKQKMSVI 102

Query: 393 QPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVIS 448
           QP++++L+EK+K+  P+    LQK  ++LY  H  NP+  GC P+L+Q+P+   +Y  I 
Sbjct: 103 QPELNKLKEKYKEKTPENQAKLQKETMELYSKHQFNPMAIGCLPMLIQMPILTGLYYAIK 162

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
           ++ E+     + W + L   D                      I P + +   ++Q ++S
Sbjct: 163 MTPELAQHS-FLWFQ-LGTPDH---------------------ILPFLAAAIYYVQFRVS 199

Query: 509 PPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
               D  Q   +  +    PV+      S PA + +YW       I+Q  V  K++ 
Sbjct: 200 QIGMDSAQQKQMAMLGLLSPVMMGIFSFSAPAAVPLYWVVGGTFMIIQTLVSKKLYP 256


>gi|309799090|ref|ZP_07693343.1| membrane protein OxaA 1 [Streptococcus infantis SK1302]
 gi|308117325|gb|EFO54748.1| membrane protein OxaA 1 [Streptococcus infantis SK1302]
          Length = 277

 Score =  110 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 106/233 (45%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+  +   F+      F     F +   + G+ I+L T+ ++ +  P+ + Q V++  M+
Sbjct: 31  EITAESTGFWSKFVYFFAETIRFLSFDTSIGLGIILFTLLIRTILLPVFQIQMVASRKMQ 90

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
            +QP + ELRE++     +    L + M QL+K H +   A  WPIL+Q+PV  A+++ +
Sbjct: 91  EVQPLVKELRERYPGRDMESRTKLDQEMRQLFKQHGVKQSASLWPILIQMPVLLALFQAL 150

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  +E      + WI +L   D T                    + PI+ ++  F+   +
Sbjct: 151 SR-VEFLKTGHFLWI-NLGGVDTTF-------------------VLPILAAIFTFLSTWL 189

Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  MPV+  F     P+G+ +YW+ SN   ++Q  ++ 
Sbjct: 190 SNKAMVEKNGAMTGMMYAMPVMIFFFAMYSPSGVALYWAVSNAYQVLQTYLLN 242


>gi|42519904|ref|NP_965834.1| stage III sporulation protein J precursor [Lactobacillus johnsonii
           NCC 533]
 gi|227889159|ref|ZP_04006964.1| membrane protein chaperone oxaA [Lactobacillus johnsonii ATCC
           33200]
 gi|41584194|gb|AAS09800.1| stage III sporulation protein J precursor [Lactobacillus johnsonii
           NCC 533]
 gi|227850388|gb|EEJ60474.1| membrane protein chaperone oxaA [Lactobacillus johnsonii ATCC
           33200]
          Length = 291

 Score =  110 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 29/231 (12%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           +W   Y +      ++     +  ++G AI++ T+ V+++  PL      S A  + +QP
Sbjct: 46  NWWDRYIVYYISQFILWIASLVHDSYGWAIIIFTIIVRIILLPLNAISIRSMAKQQKVQP 105

Query: 395 KIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           ++D LR+K+        Q LQ+   +LYK   INP  GC P+L+Q+PV +A+Y+ I  + 
Sbjct: 106 QMDALRKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTP 165

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL----SMFIQMKM 507
           ++     + W+ DL   DP                     I PI+ ++    S +I    
Sbjct: 166 QL-QNGRFLWM-DLGRPDPYY-------------------IMPILAAVFTFMSTYISQMS 204

Query: 508 SPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +P  +  G    + + MP++   +     + + +YW  SN+  +VQ  ++ 
Sbjct: 205 TPQSSQNGMTKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFILQ 255


>gi|19745513|ref|NP_606649.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS8232]
 gi|50913669|ref|YP_059641.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS10394]
 gi|94987926|ref|YP_596027.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS9429]
 gi|94991810|ref|YP_599909.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS2096]
 gi|306827963|ref|ZP_07461230.1| membrane protein [Streptococcus pyogenes ATCC 10782]
 gi|38503058|sp|Q8P2D8|OXAA2_STRP8 RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|73921526|sp|Q5XDQ5|OXAA2_STRP6 RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|19747631|gb|AAL97148.1| hypothetical protein spyM18_0404 [Streptococcus pyogenes MGAS8232]
 gi|50902743|gb|AAT86458.1| 60 kDa inner membrane protein [Streptococcus pyogenes MGAS10394]
 gi|94541434|gb|ABF31483.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS9429]
 gi|94545318|gb|ABF35365.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS2096]
 gi|304429882|gb|EFM32924.1| membrane protein [Streptococcus pyogenes ATCC 10782]
          Length = 307

 Score =  110 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 31/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +  + +    T      +P    +++   Q      Q  ++   + H INPL   GC P
Sbjct: 83  SWKASYQSEKMTFLKPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +L+Q+P F A+Y     +  +  + F G   DL +                        +
Sbjct: 143 LLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR---------------------SLV 179

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
              I++   F Q  +S     + Q      ++  MP++ +F   S PAG+ +YW      
Sbjct: 180 LTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFF 239

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           SI+QQ +    +  +  L  +++  ++K    
Sbjct: 240 SIIQQLITT--YLLKPRLHKQIKEEYAKTPPK 269


>gi|22537748|ref|NP_688599.1| OxaA-like protein precursor [Streptococcus agalactiae 2603V/R]
 gi|38503010|sp|Q8DY84|OXAA2_STRA5 RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|22534639|gb|AAN00472.1|AE014265_1 lipoprotein, putative [Streptococcus agalactiae 2603V/R]
 gi|319745517|gb|EFV97819.1| membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 310

 Score =  110 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 78/213 (36%), Gaps = 27/213 (12%)

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL-- 427
           L    + K       M   +P  + + E+ + +  Q      Q  ++   + + ++    
Sbjct: 78  LGLYQSWKASYQAEKMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGG 137

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487
            GC P+L+Q+P F AI+     +                   P      F  L       
Sbjct: 138 IGCLPLLIQMPFFSAIFFAARYT-------------------PGVSSATFLGLNLGQKSL 178

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
               I  I+  +  ++ M+  P    +    ++  MP++ VF   S PA + +YW    +
Sbjct: 179 TLTVIIAILYFVQSWLSMQGVPDEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGI 238

Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            SI+QQ V    +  +  L  ++   ++KN   
Sbjct: 239 FSIIQQLVTT--YVLKPKLRRKVEEEYTKNPPK 269


>gi|228478121|ref|ZP_04062732.1| preprotein translocase subunit YidC [Streptococcus salivarius
           SK126]
 gi|228250301|gb|EEK09554.1| preprotein translocase subunit YidC [Streptococcus salivarius
           SK126]
          Length = 284

 Score =  110 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 26/225 (11%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-A 414
             G+ G+ I++ T+ ++ +  PL  +Q  S+  ++ +QP++  L+ ++     +     A
Sbjct: 66  FGGSIGLGIIIFTILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYA 125

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
              LYK H +NP A   P+L+Q P+  A+Y  ++   E+R    + W+ DL   DP    
Sbjct: 126 QQDLYKEHGVNPYASFVPLLIQFPILMALYGALTRVPELR-EGTFLWV-DLGQKDPYF-- 181

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWM-PVVFVFAL 531
                            I PI+ +   F+   ++   A    AM  ++N M P+   +  
Sbjct: 182 -----------------ILPILAAAFTFLSTWLTNKAAKDRSAMLLVMNIMLPIFIFWFG 224

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
           +   +G+ +YW+ SN   +VQ  V        I   +RL +   +
Sbjct: 225 TQISSGVALYWAVSNAFQVVQILVFNNPFKI-IEERNRLEAEEKE 268


>gi|306830233|ref|ZP_07463416.1| ParB/SpoJ family partitioning protein [Streptococcus mitis ATCC
           6249]
 gi|304427600|gb|EFM30697.1| ParB/SpoJ family partitioning protein [Streptococcus mitis ATCC
           6249]
          Length = 277

 Score =  110 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  D    +      F  +  F +   + G+ I+L T+ ++ +  P+ + Q V++  M+
Sbjct: 31  DITADSTDLWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQIVASRKMQ 90

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  L+E++     +    L + M ++YK   +   +  WPIL+Q+PV  A+++ +
Sbjct: 91  EAQPRIKALQEQYPGRDMESRTKLDQEMRKVYKELGVKHSSSIWPILIQMPVLLALFQAL 150

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  +E      + W+ +L   D +                    I PI+ ++  F+   +
Sbjct: 151 SR-VEFLKTGHFLWV-NLGGVDTSF-------------------ILPILAAVFTFLSSWL 189

Query: 508 SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S     +       ++  MPV+      S P+G+ +YW+ SN   ++Q   + 
Sbjct: 190 SNKALPERSGAMTGMMYGMPVLIFIFAISAPSGVALYWAVSNAYQVLQTYFLN 242


>gi|167745103|pdb|3BS6|A Chain A, 1.8 Angstrom Crystal Structure Of The Periplasmic Domain
           Of The Membrane Insertase Yidc
 gi|167745104|pdb|3BS6|B Chain B, 1.8 Angstrom Crystal Structure Of The Periplasmic Domain
           Of The Membrane Insertase Yidc
          Length = 280

 Score =  110 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 86/263 (32%), Gaps = 17/263 (6%)

Query: 67  MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126
               + +K   L  +IN +G   +   L  Y  +++S  P   L   ++ +  Y A+   
Sbjct: 2   QGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGL 59

Query: 127 VSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLF 180
                     N       +               +   + +A    F +T  L    Y  
Sbjct: 60  TGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPXTYTDAAGNTFTKTFVLKRGDYAV 119

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQK 233
            +   V N     +  S  G++ +         T ++ F +     A          + K
Sbjct: 120 NVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYK 179

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293
           +  I  +   N      W+    +Y+A+ +IP  + + +  F   + G+      + +  
Sbjct: 180 FDTIADNENLNISSKGGWVAXLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQP 237

Query: 294 ITILPGKSITTTNFLFAGAKEFP 316
           + + PG++    + L+ G +   
Sbjct: 238 VLVQPGQTGAXNSTLWVGPEIQD 260


>gi|55821782|ref|YP_140224.1| cytochrome oxidase biogenesis (Oxa1) family protein, SpoIIIJ
           [Streptococcus thermophilus LMG 18311]
 gi|55823700|ref|YP_142141.1| hypothetical protein str1810 [Streptococcus thermophilus CNRZ1066]
 gi|116628498|ref|YP_821117.1| preprotein translocase subunit YidC [Streptococcus thermophilus
           LMD-9]
 gi|55737767|gb|AAV61409.1| cytochrome oxidase biogenesis (Oxa1) family protein, similar to
           SpoIIIJ [Streptococcus thermophilus LMG 18311]
 gi|55739685|gb|AAV63326.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
 gi|116101775|gb|ABJ66921.1| Preprotein translocase subunit YidC [Streptococcus thermophilus
           LMD-9]
 gi|312279125|gb|ADQ63782.1| Preprotein translocase subunit YidC [Streptococcus thermophilus
           ND03]
          Length = 268

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 25/206 (12%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-A 414
             G+ G+ I++ T+ ++ +  PL  +Q  S+  ++ +QP++  L+ ++     +     A
Sbjct: 50  FGGSIGLGIIIFTILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYA 109

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
             +LYK H +NP A   P+++Q P+  A+Y  ++   E+R    + W+ DL   DP    
Sbjct: 110 QQELYKEHGVNPYASFLPLIIQFPILMALYGALTRVPELREGS-FLWV-DLGQKDPYF-- 165

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWM-PVVFVFAL 531
                            I PI+ +   F+   ++   A    AM  ++N M P+   +  
Sbjct: 166 -----------------ILPILAAAFTFLSTWLTNKVAKDRSAMLIVMNIMLPIFIFWFG 208

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIM 557
           +   +G+ +YW+ SN   +VQ  V  
Sbjct: 209 TQISSGVALYWTVSNAFQVVQILVFN 234


>gi|76787971|ref|YP_330226.1| OxaA-like protein precursor [Streptococcus agalactiae A909]
 gi|76563028|gb|ABA45612.1| membrane protein [Streptococcus agalactiae A909]
          Length = 310

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 78/213 (36%), Gaps = 27/213 (12%)

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL-- 427
           L    + K       M   +P  + + E+ + +  Q      Q  ++   + + ++    
Sbjct: 78  LGLYQSWKASYQAEKMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGG 137

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487
            GC P+L+Q+P F AI+     +                   P      F  L       
Sbjct: 138 IGCLPLLIQMPFFSAIFFAARYT-------------------PGVSSATFLGLNLGQKSL 178

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
               I  I+  +  ++ M+  P    +    ++  MP++ VF   S PA + +YW    +
Sbjct: 179 TLTVIIAILYFVQSWLSMQGVPDEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGI 238

Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            SI+QQ V    +  +  L  ++   ++KN   
Sbjct: 239 FSIIQQLVTT--YVLKPKLRRKVEEEYTKNPPK 269


>gi|331700391|ref|YP_004336630.1| membrane protein [Pseudonocardia dioxanivorans CB1190]
 gi|326955080|gb|AEA28777.1| membrane protein insertase, YidC/Oxa1 family [Pseudonocardia
           dioxanivorans CB1190]
          Length = 365

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 102/261 (39%), Gaps = 35/261 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++ +++              + +A++     ++ + +     Q  S   
Sbjct: 1   MLNFIYYPVSAILWFWHKAFGFVFSPTSGVAWALAVVFLVFTLRAILYKPFVGQVRSMRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+  QP+I +LR+K+     Q + + M +L     +NP+ GC P+L+Q+PVF  ++ V+ 
Sbjct: 61  MQEFQPEIQKLRKKYANDK-QKMTQEMQRLQSEQGVNPVGGCLPVLIQVPVFIGLFHVLR 119

Query: 449 ISLEMRHAPFWGWIKDL---------AAADPTNIFTLFGILPF-----YLPGFMHVGI-W 493
                +   +    +D+          A    +I  L G          +   + V I  
Sbjct: 120 EFKPGKTENYIFNAEDVRSFVDADLFGAKLGASIVPLQGAPSLESLGTTVGQMLVVMIPL 179

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAM----------ILNWMPVVFVFALSSFPAGLIIYWS 543
            I+  +   I  + S     + QA           +L   P+  V      P  ++ YW 
Sbjct: 180 MIMAGVFTHITARHSVARQTEVQAANPQSAIMNKLMLYVFPIGVVVGAPFLPLAILFYWV 239

Query: 544 WSNVISIVQQAVIMKMHGAEI 564
            +N+ ++ QQ ++ K   AE 
Sbjct: 240 SNNLWTLAQQRIVYKKIDAEE 260


>gi|295106384|emb|CBL03927.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
           [Gordonibacter pamelaeae 7-10-1-b]
          Length = 256

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 117/231 (50%), Gaps = 10/231 (4%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            +      +F ++ +FY+  G++G+AI++ TV  ++L  PL  KQ  S+  M+ +QP + 
Sbjct: 1   MWDAFKDLIFQIIQFFYDFCGDWGLAIIIVTVIFRVLISPLMHKQTKSSFQMQKVQPLMK 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           E++ K+    PQ  Q+ M +LY     NPLAGC P+LLQ+P+F A+++V+S     R   
Sbjct: 61  EIQTKYAD-DPQRQQEEMQKLYAEVKFNPLAGCLPMLLQMPIFMALFQVLSEMGA-RTEG 118

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI----QMKMSPPPAD 513
                 +L    P+ +             F+   I  ++ + + F+    Q   +   A 
Sbjct: 119 STYEFYNLV---PSLVERPSEAFAQGFGTFVPYLILMVVFAGATFLPMVLQQMNNKDSAQ 175

Query: 514 KGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           + Q +I+   M V  ++   S PAG++++W  S++I + QQ + M++    
Sbjct: 176 RKQMVIMSAVMSVFMLWISWSSPAGVLLFWGASSLIGLGQQQISMRIMKKR 226


>gi|313890878|ref|ZP_07824502.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313120776|gb|EFR43891.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 309

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 75/210 (35%), Gaps = 31/210 (14%)

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPIL 434
             + +           +P    ++    Q      Q  ++   K + IN L   GC P+L
Sbjct: 85  KASYQSEKMAYLKPVFEPINQRMKNATSQEEKFAAQSELMAAQKENGINMLGGMGCLPLL 144

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P F A+Y     +  +     +  I DL +                        I  
Sbjct: 145 IQMPFFSAMYFAALHTKGI-STSHFLGI-DLGSK---------------------SLILT 181

Query: 495 IIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
            I+++  F Q  +S     + Q      ++  MP++ +F   + PAG+ +YW      SI
Sbjct: 182 AIIAILYFFQSWLSMQAVAEEQRAQMKTMMYTMPIMMIFMTMTLPAGVGLYWLVGGFFSI 241

Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           +QQ +    +  +  L  ++   F  N   
Sbjct: 242 IQQLITT--YFIKPKLRQQIEEEFKNNPPK 269


>gi|226315530|ref|YP_002775426.1| membrane protein OxaA precursor [Brevibacillus brevis NBRC 100599]
 gi|226098480|dbj|BAH46922.1| membrane protein OxaA precursor [Brevibacillus brevis NBRC 100599]
          Length = 252

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 113/231 (48%), Gaps = 25/231 (10%)

Query: 337 GWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
            W  +   P+  L+     L+  N+G+ I++ T+ ++++  PL  KQ  S+  M+ IQP+
Sbjct: 36  IWDKYFVYPLSWLIKESALLLGNNYGLGILVATIIIRIIVLPLMVKQIKSSKKMQEIQPE 95

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           + ++REK+K   PQ  Q   + +++   +NPLAGC P+L+Q+P+  A Y  I  + E+  
Sbjct: 96  MQKIREKYKN-DPQKAQAETMAMFQKSGVNPLAGCLPMLVQMPILIAFYHAIIRTSEINS 154

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--AD 513
              + W+  L   DP                     I PII +++ ++Q KM       +
Sbjct: 155 Q-TFMWLT-LGQKDPYY-------------------ILPIIAAITTYLQSKMMGQANQGN 193

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
               M++  MP++ +    + P+ L +YW + N+ +IVQ   + +  G   
Sbjct: 194 PQMQMMIIMMPLMILAIAVTLPSALSLYWVYGNLFTIVQTYFLYRDKGKMP 244


>gi|116491815|ref|YP_811359.1| preprotein translocase subunit YidC [Oenococcus oeni PSU-1]
 gi|116092540|gb|ABJ57694.1| Preprotein translocase subunit YidC [Oenococcus oeni PSU-1]
          Length = 286

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 99/249 (39%), Gaps = 29/249 (11%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
                   ++        ++G  I++ T+ ++ L  PL      S+ NM  + P + +++
Sbjct: 48  ITGFFANSILGVSKLCGNSYGFGIVIFTLLIRFLILPLMVYSISSSKNMAKVAPLVKKVQ 107

Query: 401 EKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
            K+K          LQ+    +YK   +NP A   P+L+Q+PV +A+++ +S +  ++  
Sbjct: 108 AKYKGKRDRDSMTKLQEETSSIYKEAGVNPYASLLPVLIQLPVLWALFQSVSSTPALKTG 167

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
             + W++ L + DP                     + PI  +L  FI   MS     K Q
Sbjct: 168 S-FFWLQ-LGSPDPYF-------------------VLPIFAALFTFISSWMSTASMGKDQ 206

Query: 517 ---AMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
              A  +    P + +F+  +  + L +YW  +N   +VQ   +     A      +  +
Sbjct: 207 PGFAKAMPYIFPFIILFSALAVSSALSLYWVATNAFQVVQTFFLQNPFKARAEEKAKELA 266

Query: 573 TFSKNYNSQ 581
              +    +
Sbjct: 267 ELERKKAIK 275


>gi|262278043|ref|ZP_06055830.1| 60 kD inner-membrane protein [alpha proteobacterium HIMB114]
 gi|262223790|gb|EEY74255.1| 60 kD inner-membrane protein [alpha proteobacterium HIMB114]
          Length = 142

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 3/140 (2%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID-- 59
             N N  VA+ LS +++  WQ  Y     E+ N + +  Q  +      +    + ++  
Sbjct: 1   MENRNVLVAVILSTLVIMIWQFEYADQYSEQENIQTQIEQVDQNKPIAPSLDKNIKVEKK 60

Query: 60  -DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
             R  A+    RV  +N ++ GSI+L GA  DD+ L+ Y++D +++S  V LL+P    +
Sbjct: 61  ISREDAIKDVERVSFENDNIKGSISLTGALIDDVILKNYNVDQTTDSKKVVLLNPKQIND 120

Query: 119 AYFAELDYVSTANNIELPNS 138
           +YF E  + ++ N     N 
Sbjct: 121 SYFLETGWATSGNETVPDNQ 140


>gi|324989805|gb|EGC21748.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis
           SK353]
          Length = 271

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 105/232 (45%), Gaps = 29/232 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409
            F +  G+ GI I+L T+ ++ +  P+ + Q  S+  ++ +QP I +L+EK+     +  
Sbjct: 46  RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESR 105

Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L +   +LYK   +NP A   P+ +Q+PV  A+++ ++  ++      + W+ +L A 
Sbjct: 106 TALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525
           DPT                    I P++ +L  F    +S       + G  +++  MPV
Sbjct: 164 DPTF-------------------ILPLLAALFTFFSTWLSNKALPERNGGMTVMMYLMPV 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           V  F      +G+ +YW+ SN   +VQ  ++   +  +I      +    + 
Sbjct: 205 VIFFFALYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254


>gi|327462709|gb|EGF09031.1| stage III sporulation protein J [Streptococcus sanguinis SK1057]
          Length = 271

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 105/232 (45%), Gaps = 29/232 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409
            F +  G+ GI I+L T+ ++ +  P+ + Q  S+  ++ +QP I  L+EK+     +  
Sbjct: 46  RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESR 105

Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L +   +LYK   +NP A   P+ +Q+PV  A+++ ++  ++      + W+ +L A 
Sbjct: 106 TALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525
           DPT                    I P++ +L  F+   +S       + G  +++  +PV
Sbjct: 164 DPTF-------------------ILPLLAALFTFLSTWLSNKALPERNGGMTVMMYLLPV 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           +  F      +G+ +YW+ SN   +VQ  ++   +  +I      +    + 
Sbjct: 205 MIFFFALYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254


>gi|242042503|ref|XP_002468646.1| hypothetical protein SORBIDRAFT_01g049540 [Sorghum bicolor]
 gi|241922500|gb|EER95644.1| hypothetical protein SORBIDRAFT_01g049540 [Sorghum bicolor]
          Length = 449

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 93/238 (39%), Gaps = 34/238 (14%)

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           P          F  +A    +L +       N+   I LTTV ++L+  PL   Q  ST 
Sbjct: 134 PGEVAAAAAESFPPVAALQHLLDAVQSFTGLNWWATIALTTVMIRLVTVPLLINQMKSTM 193

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            +  ++P+I+ + E+ + S          + + +L+  H + PL     + +Q P+F + 
Sbjct: 194 KLNEMRPEIEAINEEMRNSTDPRSMEVGKQKLGELFLRHGVTPLTPLKGLFIQGPIFMSF 253

Query: 444 YKVISISLE----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           +  IS  +E    M+    + W  DL   D                      I P++ SL
Sbjct: 254 FFAISNMVEKVPSMKGGGMY-WFTDLTTPDNLF-------------------ILPVLTSL 293

Query: 500 SMFIQMKMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           +    ++++        P  K    +  +  V+FV     FP  +  YW  SN+ S+V
Sbjct: 294 TFLATVELNMQDGMEGNPMAKTMKKVSRFFGVMFVPFTIGFPKAIFFYWVTSNLFSLV 351


>gi|213692302|ref|YP_002322888.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|213523763|gb|ACJ52510.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 296

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 96/219 (43%), Gaps = 22/219 (10%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQK 413
            + GIAIM   + +++   PL   Q  +T  M+ +QP+I  ++ K+         + +Q+
Sbjct: 3   HSLGIAIMCLVLIIRICLLPLFFSQMRATQRMQVLQPQIQRIQRKYAARKDPRSKEAMQR 62

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRHAPFWGWIKDLAAAD-- 469
            ++ L + HN NPL  C   L+Q P+  +++  +    +    +A     I  + A D  
Sbjct: 63  EIMALQQRHNANPLGSCLLSLIQAPILCSLFYTLQSLPASAAGNAEPLSGIDRVMAGDIE 122

Query: 470 PTNIFTLFGILPF----YLPGFMHVGIWPIIMSLSMFIQMKM-----SPP-PADKGQ--- 516
            ++IF +     F         + +G+   +M L +F    +     +P    D  Q   
Sbjct: 123 SSSIFGVRIADSFGTVVSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQFRT 182

Query: 517 AMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
             +  +  P ++V +  + P G+++YW  +N+ +  Q  
Sbjct: 183 QKLTAFVFPAIYVVSGGTLPFGVLLYWLTNNLWNFGQTL 221


>gi|94989800|ref|YP_597900.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS10270]
 gi|94543308|gb|ABF33356.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes
           MGAS10270]
          Length = 307

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 31/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +  + +    T      +P    +++   Q      Q  ++   + H INPL   GC P
Sbjct: 83  SWKASYQSEKMTFLKPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +L+Q+P F A+Y     +  +  + F     DL +                        +
Sbjct: 143 LLIQMPFFSAMYFAAQYTKGVSTSTFMS--IDLGSR---------------------SLV 179

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
              I++   F Q  +S     + Q      ++  MP++ +F   S PAG+ +YW      
Sbjct: 180 LTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFF 239

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           SI+QQ +    +  +  L  +++  ++KN   
Sbjct: 240 SIIQQLITT--YLLKPRLHKQIKEEYAKNPPK 269


>gi|116492484|ref|YP_804219.1| preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC
           25745]
 gi|116102634|gb|ABJ67777.1| Preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC
           25745]
          Length = 316

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 99/258 (38%), Gaps = 40/258 (15%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK----NI 392
            + Y        +    + L G++G+AI+L T  V+L+  PL   Q       +     I
Sbjct: 36  IYDYLAIPTQHFMNYLSHLLCGSYGLAIILVTFVVRLILLPLMLNQSRKATIQQEKMAFI 95

Query: 393 QPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKV 446
           QP++  L+ + +          + + M+ LYK +N++     GC PI++Q PVF A+Y  
Sbjct: 96  QPQLKVLQARNQAAKTPEERAAISQEMMALYKDNNVSMTGGIGCLPIIIQFPVFAALYAA 155

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
           I  S E+                      LF  +    P  +   I  ++      +Q  
Sbjct: 156 IQYSPELHQ-------------------GLFLGINLAKPSILLAAISFLVY----LLQGW 192

Query: 507 MSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           +        Q  ++  M    P++ +F   S P GL +Y++   V + +Q   I      
Sbjct: 193 LGTLGVAPEQRKMMRSMMIVSPLMILFFTFSSPGGLGLYFAVGGVFACIQTLAIN---LY 249

Query: 563 EIGLIDRLRSTFSKNYNS 580
              +  R++    KN   
Sbjct: 250 RPKIKARIQEEMKKNPPK 267


>gi|332360026|gb|EGJ37840.1| stage III sporulation protein J [Streptococcus sanguinis SK1056]
          Length = 271

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 110/248 (44%), Gaps = 30/248 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           +G++  +       + +     G+ GI I+L T+ ++ +  P+ + Q  S+  ++ +QP 
Sbjct: 31  YGFWEKLVYFFADTIRFLS-FGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPH 89

Query: 396 IDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           I +L+EK+     +    L +   +LYK   +NP A   P+ +Q+PV  A+++ ++  ++
Sbjct: 90  IKQLQEKYPGKDMESRTALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VD 148

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511
                 + W+ +L A DPT                    I P++ +L  F    +S    
Sbjct: 149 FMKTGHFLWL-NLGATDPTF-------------------ILPLLAALFTFFSTWLSNKAL 188

Query: 512 --ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
              + G  +++  MPVV  F      +G+ +YW+ SN   +VQ  ++   +  +I     
Sbjct: 189 PERNGGMTVMMYLMPVVIFFFALYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAERE 246

Query: 570 LRSTFSKN 577
            +    + 
Sbjct: 247 AKERSERQ 254


>gi|294623037|ref|ZP_06701926.1| membrane protein OxaA 2 [Enterococcus faecium U0317]
 gi|291597593|gb|EFF28755.1| membrane protein OxaA 2 [Enterococcus faecium U0317]
          Length = 316

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 92/252 (36%), Gaps = 39/252 (15%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395
                +     N   ++G A++  TV V+++  PL   Q   T                 
Sbjct: 45  PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453
             +L+    +      Q  M Q+Y+ + ++     GC P+L+Q+P+F A+Y     +  +
Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R + F+G   DL +                        +   I  ++  +Q  +S     
Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201

Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           + Q   +  M    P + VF   S PAG+ +YW    V S +Q  +   M   +  L  +
Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259

Query: 570 LRSTFSKNYNSQ 581
           +     KN   Q
Sbjct: 260 VAEELKKNPPKQ 271


>gi|329668161|gb|AEB94109.1| stage III sporulation protein J precursor [Lactobacillus johnsonii
           DPC 6026]
          Length = 273

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 29/231 (12%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           +W   Y +      ++     +  ++G AI++ T+ V+++  PL      S A  + +QP
Sbjct: 28  NWWDRYIVYYISQFILWIASLVHDSYGWAIIIFTIIVRIILLPLNAISIRSMAKQQKVQP 87

Query: 395 KIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           ++D LR+K+        Q LQ+   +LYK   INP  GC P+L+Q+PV +A+Y+ I  + 
Sbjct: 88  QMDALRKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTP 147

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL----SMFIQMKM 507
           ++     + W+ DL   DP                     I PI+ ++    S +I    
Sbjct: 148 QL-QNGRFLWM-DLGRPDPYY-------------------IMPILAAVFTFMSTYISQMS 186

Query: 508 SPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +P  +  G    + + MP++   +     + + +YW  SN+  +VQ  ++ 
Sbjct: 187 TPQSSQNGMTKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFILQ 237


>gi|148381582|ref|YP_001256123.1| membrane protein OxaA [Clostridium botulinum A str. ATCC 3502]
 gi|153931466|ref|YP_001385959.1| putative inner membrane protein translocase component YidC
           [Clostridium botulinum A str. ATCC 19397]
 gi|153936249|ref|YP_001389366.1| putative inner membrane protein translocase component YidC
           [Clostridium botulinum A str. Hall]
 gi|153940502|ref|YP_001393001.1| putative inner membrane protein translocase component YidC
           [Clostridium botulinum F str. Langeland]
 gi|168181112|ref|ZP_02615776.1| membrane protein OxaA [Clostridium botulinum NCTC 2916]
 gi|170756937|ref|YP_001783280.1| putative inner membrane protein translocase component YidC
           [Clostridium botulinum B1 str. Okra]
 gi|226951097|ref|YP_002806188.1| membrane protein OxaA [Clostridium botulinum A2 str. Kyoto]
 gi|148291066|emb|CAL85203.1| membrane protein [Clostridium botulinum A str. ATCC 3502]
 gi|152927510|gb|ABS33010.1| putative sporulation protein/membrane protein insertase, OxaA
           family [Clostridium botulinum A str. ATCC 19397]
 gi|152932163|gb|ABS37662.1| putative sporulation protein/membrane protein insertase, OxaA
           family [Clostridium botulinum A str. Hall]
 gi|152936398|gb|ABS41896.1| membrane protein OxaA [Clostridium botulinum F str. Langeland]
 gi|169122149|gb|ACA45985.1| putative sporulation protein/membrane protein insertase, OxaA
           family [Clostridium botulinum B1 str. Okra]
 gi|182668148|gb|EDT80127.1| membrane protein OxaA [Clostridium botulinum NCTC 2916]
 gi|226842892|gb|ACO85558.1| membrane protein OxaA [Clostridium botulinum A2 str. Kyoto]
 gi|295320977|gb|ADG01355.1| membrane protein OxaA [Clostridium botulinum F str. 230613]
 gi|322807969|emb|CBZ05544.1| inner membrane protein translocase component YidC, short form
           OxaI-like [Clostridium botulinum H04402 065]
          Length = 217

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 33/239 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +  F       + +   N   ++GIAI+L T+ ++LL  PL  KQ  S+  M  +QP+I 
Sbjct: 8   FVQFFKFIHGAVSNVISNPNFSYGIAIILVTLIIRLLILPLNIKQTKSSLRMNELQPEIK 67

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L+ K+K   PQ L +  ++LYK   +NPL GC P+L+Q P+F A+Y V +    +    
Sbjct: 68  KLQAKYKN-DPQKLNQKTMELYKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTGINGIS 126

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + W+KDLA  D                      +  ++   + +    +    AD  QA
Sbjct: 127 -FLWVKDLAKPD---------------------VVLAVLSGATTYFSGTL-MTTADSSQA 163

Query: 518 MILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
             +      M +  +       + L++YW  +N+I I+Q  VIMK       L  ++ +
Sbjct: 164 GQMKSMNIGMSIFMIVISWKLKSALVLYWVINNLIQIIQT-VIMKKM----ELRGKVEA 217


>gi|327460763|gb|EGF07098.1| stage III sporulation protein J [Streptococcus sanguinis SK1]
 gi|328944626|gb|EGG38787.1| stage III sporulation protein J [Streptococcus sanguinis SK1087]
          Length = 271

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 105/232 (45%), Gaps = 29/232 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409
            F +  G+ GI I+L T+ ++ +  P+ + Q  S+  ++ +QP I +L+EK+     +  
Sbjct: 46  RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESR 105

Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L +   +LYK   +NP A   P+ +Q+PV  A+++ ++  ++      + W+ +L A 
Sbjct: 106 TALAEETQKLYKEMGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525
           DPT                    I P++ +L  F    +S       + G  +++  MPV
Sbjct: 164 DPTF-------------------ILPLLAALFTFFSTWLSNKALPERNGGMTVMMYLMPV 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           +  F      +G+ +YW+ SN   +VQ  ++   +  +I      +    + 
Sbjct: 205 MIFFFALYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254


>gi|288906262|ref|YP_003431484.1| hypothetical protein GALLO_2078 [Streptococcus gallolyticus UCN34]
 gi|306832308|ref|ZP_07465462.1| stage III sporulation protein J [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325979273|ref|YP_004288989.1| hypothetical protein SGGBAA2069_c20730 [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288732988|emb|CBI14569.1| conserved hypothetical membrane protein [Streptococcus gallolyticus
           UCN34]
 gi|304425747|gb|EFM28865.1| stage III sporulation protein J [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325179201|emb|CBZ49245.1| unnamed protein product [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 271

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 107/255 (41%), Gaps = 27/255 (10%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+       +      F     + ++ G  G+ I+L T+ ++ +  PL   Q  S   M+
Sbjct: 25  EVTASSTNGWDQIVYFFAKAIQWLSINGRIGVGIVLFTIIIRAIMMPLYNMQIKSGQKMQ 84

Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           ++QP++ +L+EK+          L +    LYK + +NP A   P+++Q+P+  A+Y+ +
Sbjct: 85  DLQPELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVVQLPILMALYQAL 144

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +    ++    + WI+ L+  DP                     I P++ +L  F+   +
Sbjct: 145 TRVAFLK-TGTFLWIE-LSKPDPYF-------------------ILPVLAALFTFLSSWL 183

Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           +   A   +    ++   MP++  F      +G+++YWS S    + Q  ++        
Sbjct: 184 TNKAAREKNIAMTVMTYVMPIMIFFMSFRLASGVVLYWSVSYAFQVFQILLLNNPFKIIA 243

Query: 565 GLIDRLRSTFSKNYN 579
             ++  ++   +   
Sbjct: 244 KRLEEEQAEKERAAK 258


>gi|295103712|emb|CBL01256.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
           [Faecalibacterium prausnitzii SL3/3]
          Length = 353

 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 115/293 (39%), Gaps = 49/293 (16%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
             +FY ++ P+  +M + Y L+ N+G  I+L T+ + ++  PL   Q  S A M   QP 
Sbjct: 1   MNFFYILSGPLGYVMEWIYKLLPNYGWDIILFTLLINIVKIPLQTSQQKSMAKMSAFQPM 60

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-MR 454
           I E++ K+K   P+  Q+ +++L +     P AGC P+LL   V F +  V+   LE + 
Sbjct: 61  IAEIQTKYKN-KPEKQQEELMKLQQDFGYKPTAGCVPMLLNFLVMFGVIGVVYNPLERIF 119

Query: 455 H----------------------------------APFWGWIKDLAAADPTNIFTLFGIL 480
           H                                  A   G +    A     I      +
Sbjct: 120 HISAAALASAGEALTAAGISFTAITRDTNIIAEVVAGNSGVLGCFTAQQIATITEFSQHM 179

Query: 481 PFYLPGFMHVG--------IWPIIMSLSMFIQMKMSP-PPADKGQAMI---LNWMPVVFV 528
            F+      +         + P++  ++MF+   +S      + Q  +   +  MP++++
Sbjct: 180 NFFGIDLTRIPKLGLSLDIVLPLLSVITMFLSTHISMKASGQQMQGSMKLTMYMMPLMYL 239

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           F   ++P    +Y+  SN++   Q   +M+       +   + +  +     +
Sbjct: 240 FFCFTYPLAFSLYYVISNIVMTAQTQ-VMRKFYDPEKMRKEVEAEIAAKRKQE 291


>gi|307297278|ref|ZP_07577084.1| membrane protein insertase, YidC/Oxa1 family [Thermotogales
           bacterium mesG1.Ag.4.2]
 gi|306916538|gb|EFN46920.1| membrane protein insertase, YidC/Oxa1 family [Thermotogales
           bacterium mesG1.Ag.4.2]
          Length = 448

 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 81/402 (20%), Positives = 158/402 (39%), Gaps = 35/402 (8%)

Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGR-IMRHKPQTATNTFGVQEGFIA 222
              ++  ++  D   +F +  T    +         G  I+    +  + +F +      
Sbjct: 64  EFYVYNESLGKDGFNVFDVEGTELLPTSFSYDKDEEGNVIVSFNYEQGSKSFIILNSPYY 123

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
                  VE  ++   + ++      N  +G    Y+ +    S + +  +         
Sbjct: 124 DF----RVELNFNQKIEVALPFISYQNQTIGPDSSYYLTYDKFSGQKTLFAITAMQGTFK 179

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
            +     +   I       +   +   A  + +  I    +D             +F +I
Sbjct: 180 FQRYESETGRGILESFAGPMRLIHMRQALPEHYDAIVKDLQDFG--------GVTFFSWI 231

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
              +   + + Y   GNFG A++L T+  + + +PL   Q  S   M+ +QP+++++++K
Sbjct: 232 YHGIVYFLFWLYQWSGNFGWALILFTIVTRFILYPLYHIQTKSMLMMRMLQPEVEKIKKK 291

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-MRHAPFWGW 461
           +K    Q  Q+AM+ LYK    NP +GC PILLQ+PV   +Y  I    E M + P +  
Sbjct: 292 YKDPRKQ--QEAMMALYKEKGYNPASGCLPILLQLPVLILLYNAIRYFSEVMAYTPGFLI 349

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
            KDL+             +PF +   + VGI+  ++               D   A    
Sbjct: 350 WKDLSV------GNFVLNIPFIIIT-VVVGIFSSLL------------TAQDARSARSGV 390

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            M V+F    ++FP+GL++YW+  +V+      V+ K +G +
Sbjct: 391 IMQVIFPILFATFPSGLLLYWTTQSVLQFFISWVVYKRNGIK 432


>gi|153956505|ref|YP_001397270.1| inner membrane protein translocase component YidC [Clostridium
           kluyveri DSM 555]
 gi|219856808|ref|YP_002473930.1| hypothetical protein CKR_3465 [Clostridium kluyveri NBRC 12016]
 gi|146349363|gb|EDK35899.1| OxaA [Clostridium kluyveri DSM 555]
 gi|219570532|dbj|BAH08516.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 221

 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 27/230 (11%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +  F       + S   N   ++GIAI+L T+ ++++  PL  KQ  S+  M  IQP++ 
Sbjct: 8   FVQFFEFLHRNVTSLIPNQNISYGIAIILMTLIIRIIILPLGVKQLKSSLIMNEIQPEVK 67

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L+EK+ +  PQ  Q+ M++LYK    +P +GC P+L+Q P+  A+Y V +    +    
Sbjct: 68  KLQEKY-KKDPQRAQQEMMKLYKEKGASPFSGCLPLLIQWPILIALYYVFNNLSGINGVS 126

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            + WI DLA  D                         I+  ++ ++         +  QA
Sbjct: 127 -FLWISDLAKRDIF---------------------LAILSGITTYLSTYFMMSSNNSEQA 164

Query: 518 MILNWMPV----VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                M +      VF    F + L++YW  SN+I I Q  VI ++   +
Sbjct: 165 KQTQTMNIGMSGFMVFMSLGFKSALVLYWVVSNLIQIAQTLVIKRIGSKK 214


>gi|306834432|ref|ZP_07467546.1| stage III sporulation protein J [Streptococcus bovis ATCC 700338]
 gi|304423418|gb|EFM26570.1| stage III sporulation protein J [Streptococcus bovis ATCC 700338]
          Length = 271

 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 108/255 (42%), Gaps = 27/255 (10%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+       +      F     + ++ G  G+ I+L T+ ++ +  PL   Q  S   M+
Sbjct: 25  EVTASSTNGWDQIVYFFAKAIQWLSINGRIGVGIVLFTIIIRAIMMPLYNMQIKSGQKMQ 84

Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           ++QP++ +L+EK+          L +    LYK + +NP A   P+++Q+P+  A+Y+ +
Sbjct: 85  DLQPELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVVQLPILMALYQAL 144

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +    ++    + WI+ L+  DP                     I P++ +L  F+   +
Sbjct: 145 TRVAFLK-TGTFLWIE-LSKPDPYF-------------------ILPVLAALFTFLSSWL 183

Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           +   A   +    ++   MP++  F      +G+++YWS S    + Q  ++        
Sbjct: 184 TNKAAREKNIAMTVMTYVMPIMIFFMSFRLASGVVLYWSVSYAFQVFQILLLNNPFKIIA 243

Query: 565 GLIDRLRSTFSKNYN 579
             ++  ++   ++  
Sbjct: 244 KRLEEEQAEKERSAK 258


>gi|94985665|ref|YP_605029.1| 60 kDa inner membrane insertion protein [Deinococcus geothermalis
           DSM 11300]
 gi|94555946|gb|ABF45860.1| 60 kDa inner membrane insertion protein [Deinococcus geothermalis
           DSM 11300]
          Length = 526

 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 95/496 (19%), Positives = 165/496 (33%), Gaps = 66/496 (13%)

Query: 74  KNPSLIGSINLKGAQFDDLNLRGY------HLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127
            +       N +G       ++ Y                  L +     N         
Sbjct: 53  TSNLQDVVFNARGEVI-GWYVKSYAGTPFIKKRADGTYDFSALKNTKTIVNMVGDRKALA 111

Query: 128 STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN-ILFERTISLDEHYLFKIVDTV 186
            TA  +  P                    + VF+   N     +T+ L        V T 
Sbjct: 112 VTAEGVLDPAQPAQTAAPQLTQNLAQNRQEAVFRYTQNGATVTKTVVLHPRNFKVDVQTT 171

Query: 187 TNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246
                        G      P       G Q   +   G  ++   +Y+ +++      H
Sbjct: 172 VEGGPQTYTMLFPGLGKADNPSVKAVPVGGQPATVQGSGTLTVPNIQYAALQEKPSQIAH 231

Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTN 306
                            I   +    +                S      + G      +
Sbjct: 232 ---------------ALIVRPQAGTTANATLTGGEQGLIAVHLSGPSSLEVYGGKNELVH 276

Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366
              +G    P +                   +F  I+  +  LM   Y LVGN+G+ I+L
Sbjct: 277 LYQSGYLNLPGLFQPN---------------FFGQISLLIVKLMEGLYKLVGNWGLVIVL 321

Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTH 422
            T+ ++L+ +PL + Q  +TA M+ +QPKI E+++K+K        + +Q  M QLY+ H
Sbjct: 322 LTILLRLIMWPLMQAQGRTTARMQVMQPKIKEIQDKYKDKRDIESQRAMQMEMAQLYREH 381

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
           N NP  GC+   L  PV  A++  I    E      + W+ DLA  DP  I  L  +   
Sbjct: 382 NFNPA-GCFSTFLPFPVLIALWSTIRN-FEF--DSGFLWLPDLAVPDPFYILALIYLC-- 435

Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
                +++G          ++  + +P   D  +     +  ++F++   +FPAG+ IY 
Sbjct: 436 -----VNIGQL--------YVMTRKNP---DMFRQQAFIY--IIFLYFALTFPAGVTIYI 477

Query: 543 SWSNVISIVQQAVIMK 558
             S +I I QQ +I +
Sbjct: 478 ILSTLIGIGQQILINR 493


>gi|10122033|gb|AAG13422.1|AC051634_3 putative Oxa1 protein [Oryza sativa Japonica Group]
          Length = 487

 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 96/242 (39%), Gaps = 34/242 (14%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           E+       +F    +  ++ Y +   G N+   I L TV ++    PL   Q  +T  +
Sbjct: 113 EVAAAAADSFFPVAALQHVIDYIHTFTGLNWWACIALATVLIRSATVPLLVNQLKATQKL 172

Query: 390 KNIQPKIDELREKF--KQSPPQVLQKAMI-QLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
             I+P+++ ++E+            KA +  L++ H ++P      +L+Q P+F + +  
Sbjct: 173 NAIRPEMEAIKEEMNAMDPKSAKEGKAKMTALFQKHGVSPFTPLKGLLIQGPIFMSFFFA 232

Query: 447 ISISLE----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           I   ++    M+      W  DL   DP                     I P++ +L   
Sbjct: 233 IRNMIDKVPSMKGGGS-LWFTDLTTPDPLY-------------------ILPVLTALIFL 272

Query: 503 IQMKMS---PPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           + ++++       +     + N+   M V+ V    SF  G+  YW  SN+ ++    VI
Sbjct: 273 VTVELNLQEGMEGNPMARKMKNFSRGMAVLTVPFTMSFAKGIFCYWITSNLFTLTYGFVI 332

Query: 557 MK 558
            +
Sbjct: 333 RR 334


>gi|308068957|ref|YP_003870562.1| membrane protein oxaA 2 precursor [Paenibacillus polymyxa E681]
 gi|305858236|gb|ADM70024.1| Membrane protein oxaA 2 precursor [Paenibacillus polymyxa E681]
          Length = 277

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 37/241 (15%)

Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----I 392
           + +++  P+  L+        G+FG+AIM  T  V+L   PL  +Q  +   MK     +
Sbjct: 47  FNHYVVFPLSWLIQQLAQWFGGSFGLAIMTLTFIVRLALLPLMMRQTRAQQGMKRKMSVM 106

Query: 393 QPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVI 447
           QP +D +++K++        Q +Q+ M+ LYK H  NPL  GC PIL+Q+P+   +Y  I
Sbjct: 107 QPDLDRIKKKYENKKDTTSQQSMQQEMMSLYKEHQFNPLNIGCLPILIQLPILSGMYTAI 166

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
            ++ E+     + W + L   D                      I  I++++    Q K+
Sbjct: 167 RLTPELASHS-FLWFR-LGQPD---------------------WILAIVVAVVYLAQAKL 203

Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           S       Q      M    P++      + PA + +YW+ S    ++Q     + +  E
Sbjct: 204 SQLQMTPDQRKQFAIMGYLSPIMMAVFSFNAPAAMPLYWTVSGTFLLLQSLWFRRRYPIE 263

Query: 564 I 564
            
Sbjct: 264 E 264


>gi|306832024|ref|ZP_07465179.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325978972|ref|YP_004288688.1| inner membrane protein oxaA [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|304425950|gb|EFM29067.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325178900|emb|CBZ48944.1| Inner membrane protein oxaA [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 306

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 84/244 (34%), Gaps = 35/244 (14%)

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           +   +          +  ++    +  L    + K    +  M  ++P  + + E+ + +
Sbjct: 51  YFANNVGLGFGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYLKPIFEPINERMRNA 110

Query: 407 PPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
             Q      Q  ++   K + IN L   GC P+L+Q+P F A+Y     +          
Sbjct: 111 TTQEEKLAAQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAAQYT---------- 160

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-- 518
                         + F  +           +  ++     F Q  +S     + Q    
Sbjct: 161 ---------QGVSESTFLGIDLGTRSIPLTAVIAVLY----FFQSWLSMQGVAEEQRAAM 207

Query: 519 --ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
              +  MP++ VF   S PA +++YW      SI+QQ + M     +  L  ++   F K
Sbjct: 208 KGTMYVMPLMMVFFGMSMPASVLLYWLVGGFFSIIQQLITM--FIIKPRLRKKIAVEFEK 265

Query: 577 NYNS 580
           N   
Sbjct: 266 NPPK 269


>gi|322412738|gb|EFY03646.1| hypothetical protein SDD27957_10315 [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 269

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 110/233 (47%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+       +     +F     + +  G+ G+ I+L T+ ++LL  PL   Q  S+  M+
Sbjct: 24  EVTAQSTSGWDQLVYLFARAIQWLSFDGSIGVGIILFTLIIRLLLMPLFNMQIRSSQKMQ 83

Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           +IQP++ EL++K+          L +    LYK + +NP A   P+L+Q+PV  A+++ +
Sbjct: 84  DIQPELRELQKKYAGKDTETRMKLAEESQALYKKYGVNPYASLMPLLIQMPVMIALFQAL 143

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +    ++    + W++ LA  D                   H+ I P++ +L  F+   +
Sbjct: 144 TRVPFLK-TGTFLWVE-LAQHD-------------------HLYILPVLAALFTFLSTWL 182

Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +   A   +    +++  MP++  F   +  +G+++YW+ SN   +VQ  ++ 
Sbjct: 183 TNLAAREKNIMMTIMIYVMPLMIFFMGFTLASGVVLYWTVSNAFQVVQLLLLN 235


>gi|195977384|ref|YP_002122628.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|195974089|gb|ACG61615.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 269

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+       +      F     + +  G+ GI I+L T+ ++LL  PL   Q  S   M+
Sbjct: 24  EVTAQSSSSWEQLVYFFAKAIQWLSFDGSTGIGIILFTIMIRLLLLPLFNMQIKSGQKMQ 83

Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           +IQP++  L++K+          L +    LYK + +NP     P+L+Q+PV FA+++ +
Sbjct: 84  DIQPELKALQKKYAAKDTATRMKLAEESQALYKKYGVNPYMSLLPLLIQMPVMFALFQSL 143

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S    +R    + W++ LA  D                   H+ I PI+ ++  F+   +
Sbjct: 144 SRVAFLR-EGTFLWVE-LARHD-------------------HLFILPILAAVFTFLSTWL 182

Query: 508 SPPPADKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +   A +  AM   +   MP+   F   +  +G+++YW+ SN   +VQ  +  
Sbjct: 183 TNLAAREKTAMITIMTYVMPIFIFFMGFNLASGVVLYWAVSNAFQVVQLLLFN 235


>gi|168187281|ref|ZP_02621916.1| membrane protein OxaA [Clostridium botulinum C str. Eklund]
 gi|169294774|gb|EDS76907.1| membrane protein OxaA [Clostridium botulinum C str. Eklund]
          Length = 246

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 26/238 (10%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +  F       + S   N   ++G+ I++ T+ ++L+ FPL  KQ  S   M  IQP++ 
Sbjct: 22  FIQFFQVMHNWVHSVVTNPNISYGLTIIIVTIIIRLVLFPLNYKQIKSQVAMNEIQPELK 81

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L+ K+K   PQ  Q+ M++LYK + +NPL GC P+L+Q P+  A+Y V           
Sbjct: 82  KLQNKYKN-DPQKQQQEMMKLYKEYGVNPLGGCLPLLIQWPILIALYYVF---------- 130

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-----VGIWPIIMSLSMFIQM-KMSPPP 511
                 +L+  DP+     F  L    P  +        I P++  L  ++    M+   
Sbjct: 131 -----SNLSKIDPSISNVTFLGLKLMNPAVLSPSQWYTWILPLLSGLLTYLSTAMMTSKN 185

Query: 512 ADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           AD  Q     M+  +M +   +    F   L++YW  +++  I Q  V       +  
Sbjct: 186 ADSAQVKQTRMMSGFMTLFITYMSFKFSTALVLYWVTNSLFQIGQTLVTQHSQNKKKE 243


>gi|163915277|ref|NP_001106402.1| oxidase (cytochrome c) assembly 1-like [Xenopus (Silurana)
           tropicalis]
 gi|156230714|gb|AAI52066.1| LOC100127562 protein [Xenopus (Silurana) tropicalis]
          Length = 425

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 91/256 (35%), Gaps = 53/256 (20%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-- 417
           +  AI+  TV  ++L FPL  K     A + N  P+I  +  +  ++     +    +  
Sbjct: 136 WWGAIVTGTVLARILVFPLIVKGQREAAKLNNHMPQISSMTNRMNEAKQSGNKFEFSKAY 195

Query: 418 -----LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAA 468
                  K H++NPL G    L+Q P+F + +  +     +      +    W  DL AA
Sbjct: 196 SDLTLYQKKHDVNPLRGFLVPLVQAPIFISFFVALRQMSYLPVPSMQSGGLWWFTDLTAA 255

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILN----WM 523
           DP                     I P+ ++ +M+  +++      D     I+      M
Sbjct: 256 DPFY-------------------ILPLTVTCTMWGVLELGAESGVDNPNLKIMKTVFRVM 296

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAV-----IMKMHGAEIGLI----------- 567
           P++ +    +FP  +  YW  SNV S+ Q +      + K       +            
Sbjct: 297 PLIILPLTINFPTAVFTYWVTSNVFSLAQVSFLRIPAVRKKLKIPERIKHDASALPPQEG 356

Query: 568 --DRLRSTFSKNYNSQ 581
               L+  +     +Q
Sbjct: 357 FIKNLKKGWKNAQMAQ 372


>gi|268320270|ref|YP_003293926.1| hypothetical protein FI9785_1808 [Lactobacillus johnsonii FI9785]
 gi|262398645|emb|CAX67659.1| conserved membrane protein [Lactobacillus johnsonii FI9785]
          Length = 291

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 106/231 (45%), Gaps = 29/231 (12%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           +W   Y +      ++     +  ++G AI++ T+ V+++  PL      S A  + +QP
Sbjct: 46  NWWDRYIVYYISQFILWIASLVHDSYGWAIIIFTIIVRIILLPLNAISIRSMAKQQKVQP 105

Query: 395 KIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           ++D LR+K+        Q LQ+   +LYK   INP  GC P+L+Q+PV +A+Y+ I  + 
Sbjct: 106 QMDALRKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTP 165

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL----SMFIQMKM 507
           ++     + W+ DL   DP  +                    PI+ ++    S +I    
Sbjct: 166 QL-QNGRFLWM-DLGRPDPYYLM-------------------PILAAVFTFMSTYISQMS 204

Query: 508 SPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +P  +  G    + + MP++   +     + + +YW  SN+  +VQ  ++ 
Sbjct: 205 TPQSSQNGMTKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFILQ 255


>gi|288906005|ref|YP_003431227.1| membrane protein [Streptococcus gallolyticus UCN34]
 gi|288732731|emb|CBI14305.1| putative conserved membrane protein [Streptococcus gallolyticus
           UCN34]
          Length = 306

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 84/244 (34%), Gaps = 35/244 (14%)

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           +   +          +  ++    +  L    + K    +  M  ++P  + + E+ + +
Sbjct: 51  YFANNVGLGFGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYLKPIFEPINERMRNA 110

Query: 407 PPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
             Q      Q  ++   K + IN L   GC P+L+Q+P F A+Y     +          
Sbjct: 111 TTQEEKLAAQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAAQYT---------- 160

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-- 518
                         + F  +           +  ++     F Q  +S     + Q    
Sbjct: 161 ---------QGVSESTFLGIDLGTRSIPLTAVIAVLY----FFQSWLSMQGVAEEQRAAM 207

Query: 519 --ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
              +  MP++ VF   S PA +++YW      SI+QQ + M     +  L  ++   F K
Sbjct: 208 KGTMYVMPLMMVFFGMSMPASVLLYWLVGGFFSIIQQLITM--FIIKPRLRKKIAVEFEK 265

Query: 577 NYNS 580
           N   
Sbjct: 266 NPPK 269


>gi|260654889|ref|ZP_05860377.1| membrane protein insertase, YidC/Oxa1 family [Jonquetella anthropi
           E3_33 E1]
 gi|260630391|gb|EEX48585.1| membrane protein insertase, YidC/Oxa1 family [Jonquetella anthropi
           E3_33 E1]
          Length = 261

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 121/247 (48%), Gaps = 23/247 (9%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +   +K ++  +S  Y++VG++G AI++ T+ ++ +  PL KKQ VS   M+ +QP+I  
Sbjct: 5   WAAASKALYDFLSLIYSVVGSWGWAILILTLIIRAVLHPLNKKQMVSMQKMQKLQPRIKV 64

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L+EK+     + L +  + LY+ + +NP +GC P+L+Q+P+   +++V+  S     A F
Sbjct: 65  LQEKYAN-DRETLGRETMALYRENKVNPASGCLPLLIQLPILILLFQVLRTS-SFGGASF 122

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHV--------------------GIWPIIMS 498
           +G   + +        T F        GF  +                        I++ 
Sbjct: 123 FGISLEGSVYTQLAQATGFAFNNPSELGFFALMSHVFKNPSGLSNVLIWLPNLALVILIC 182

Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
              ++Q KMS     +  A +L +MP++  F   S P G+ +YW+ S++++ +QQ  +++
Sbjct: 183 YLTWLQQKMSSAGNQQMGA-MLVFMPILMAFICLSLPGGVALYWAASSLLAAIQQIQVVR 241

Query: 559 MHGAEIG 565
               E  
Sbjct: 242 KVENEEK 248


>gi|260558940|ref|ZP_05831127.1| inner membrane protein [Enterococcus faecium C68]
 gi|293559780|ref|ZP_06676300.1| membrane protein OxaA 2 [Enterococcus faecium E1162]
 gi|314950195|ref|ZP_07853480.1| putative OxaA-like protein [Enterococcus faecium TX0082]
 gi|260075048|gb|EEW63363.1| inner membrane protein [Enterococcus faecium C68]
 gi|291606263|gb|EFF35677.1| membrane protein OxaA 2 [Enterococcus faecium E1162]
 gi|313643505|gb|EFS08085.1| putative OxaA-like protein [Enterococcus faecium TX0082]
          Length = 316

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 93/252 (36%), Gaps = 39/252 (15%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395
                +     N   ++G A++  TV V+++  PL   Q   T                 
Sbjct: 45  PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453
             +L+    +      Q  M Q+Y+ + ++     GC P+L+Q+P+F A+Y     +  +
Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R + F+G   DL +                        +  +I  ++  +Q  +S     
Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVVIAGVAYLLQGYISTIGIP 201

Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           + Q   +  M    P + VF   S PAG+ +YW    V S +Q  +   M   +  L  +
Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259

Query: 570 LRSTFSKNYNSQ 581
           +     +N   Q
Sbjct: 260 VAEELKQNPPKQ 271


>gi|332983465|ref|YP_004464906.1| membrane protein insertase, YidC/Oxa1 family [Mahella australiensis
           50-1 BON]
 gi|332701143|gb|AEE98084.1| membrane protein insertase, YidC/Oxa1 family [Mahella australiensis
           50-1 BON]
          Length = 238

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 114/233 (48%), Gaps = 25/233 (10%)

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
           +   +  ++ +   +VG++  AI++ T+ ++ +  PL   Q  ST  M  IQPK+ EL +
Sbjct: 1   MTAALASILEWINGMVGSYAYAIIIFTILIRTVLAPLDIMQRRSTQKMNAIQPKLKELEK 60

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP---- 457
           K+     Q LQ+  ++LY+   INPL GC P ++Q+ + F ++ VI   +     P    
Sbjct: 61  KY-GKDKQKLQQKQMELYQKEKINPLGGCLPAIVQMVLLFMLFAVIRQLVGTPDNPGALV 119

Query: 458 --FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--- 512
              + WIKD++  D   + T  G +  Y        I P +  ++ ++ MK+S PP    
Sbjct: 120 GQSFLWIKDISLPDAFWVTTKTGEINGYF-------ILPALSGITQYLYMKLSMPPQTSS 172

Query: 513 ----DKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
               +     Q  +  + P+  ++  S++ +   +YW  SN+  +V + +I+K
Sbjct: 173 AQQQNPMGCSQETMNIFFPLFSLYITSTYASAFALYWVVSNIFQVV-EFLIIK 224


>gi|251783353|ref|YP_002997658.1| membrane protein oxaA 1 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391985|dbj|BAH82444.1| membrane protein oxaA 1 precursor [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
          Length = 271

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 110/233 (47%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+       +     +F     + +  G+ G+ I+L T+ ++LL  PL   Q  S+  M+
Sbjct: 26  EVTAQSTSGWDQMVYLFARAIQWLSFDGSIGVGIILFTLIIRLLLMPLFNMQIKSSQKMQ 85

Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           +IQP++ EL++K+          L +    LYK + +NP A   P+L+Q+PV  A+++ +
Sbjct: 86  DIQPELRELQKKYAGKDTETRMKLAEESQALYKKYGVNPYASLMPLLIQMPVMIALFQAL 145

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +    ++    + W++ LA  D                   H+ I P++ +L  F+   +
Sbjct: 146 TRVPFLK-TGTFLWVE-LAQHD-------------------HLYILPVLAALFTFLSTWL 184

Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +   A   +    +++  MP++  F   +  +G+++YW+ SN   +VQ  ++ 
Sbjct: 185 TNLAAREKNIMMTIMIYVMPLMIFFMGFTLASGVVLYWTVSNAFQVVQLLLLN 237


>gi|125623406|ref|YP_001031889.1| OxaA-like protein precursor [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124492214|emb|CAL97143.1| Membrane protein oxaA 2 precursor [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300070153|gb|ADJ59553.1| OxaA-like protein precursor [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 320

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 97/276 (35%), Gaps = 39/276 (14%)

Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--- 375
            H    + +P         +   +      +  +  NL   +G  I+  T+ ++ L    
Sbjct: 27  THVVDGVRVPTEAATHGITYNLLVRPMSAFVDLFANNLHLGYGWGIIFVTLIIRFLILPL 86

Query: 376 -----FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--A 428
                +     Q           P  + L++          Q+A++   K + IN L   
Sbjct: 87  GLNQAYKSTYMQEKMAYLAPVFAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSI 146

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           GC P+L+Q P F A+Y   + +  +  + F+G                   +P   P   
Sbjct: 147 GCLPMLIQWPFFIALYNAAAYTTGISSSTFYG-------------------IPLGHPSI- 186

Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWM-PVVFVFALSSFPAGLIIYWSW 544
              +  II  +  FIQ  +S       Q      +  M P + V      PAG+ +YW+ 
Sbjct: 187 ---VLVIISGVLYFIQTWISTLSMTPEQKKSGMAMLIMSPAMIVVFSFMSPAGVALYWAV 243

Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
              + ++QQ +I  +   +  +  R+   F+KN   
Sbjct: 244 GGFVIVIQQVIITFIM--KPRMRRRIDEEFTKNPPK 277


>gi|307105163|gb|EFN53413.1| hypothetical protein CHLNCDRAFT_136603 [Chlorella variabilis]
          Length = 496

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 40/241 (16%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA------------------NMKNIQPKIDEL 399
            ++G +I+  T  +KL  FPL KKQ                       N++ ++P+ID +
Sbjct: 165 YSYGWSIVALTALIKLATFPLTKKQARPGPGPPAPFRPCLPPRVESALNVQRLKPQIDAI 224

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--SISLEMRHAP 457
           +E++  +    +Q+    LY+   ++PLAGC P L  IP+F  +Y+ +    + +   + 
Sbjct: 225 KEQYGDNKD-AVQRETSALYEKAGVDPLAGCLPSLATIPIFIGLYRSLSDFSTQQEAGSA 283

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-----------IWPIIMSLSMFIQMK 506
            + WI  LA               + LP    V              P+ + +S  I   
Sbjct: 284 AFYWIPSLAGPTSVAAQKAGSGTAWLLPLVDGVPPIGWDLASRYLALPVALYISNAI--- 340

Query: 507 MSPPPADKGQAMIL-----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           ++PP  D   A          +P++  +   + PAGL +Y+  + V +  QQ  + K+ G
Sbjct: 341 ITPPQTDDSGAAKFTQNLVKVLPLMIGWFALNVPAGLSLYYFSNTVFTTAQQVYLKKLGG 400

Query: 562 A 562
           A
Sbjct: 401 A 401


>gi|322386704|ref|ZP_08060329.1| ParB/SpoJ family partitioning protein [Streptococcus cristatus ATCC
           51100]
 gi|321269377|gb|EFX52312.1| ParB/SpoJ family partitioning protein [Streptococcus cristatus ATCC
           51100]
          Length = 273

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 29/253 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+  +   F+      F  M  F +  G+ GI I+L T+ ++ +  P+ + Q  S+  M+
Sbjct: 27  EVTANSSDFWEKLVYFFAEMIQFLSFNGSTGIGIILFTLIIRTVLLPVFQFQTTSSRKMQ 86

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
            +QP I +L+EK+          L +   +LYK   +NP A   P+ +Q+PV  A+++ +
Sbjct: 87  EVQPHIKKLQEKYPGKDMDSRAALAEETSKLYKEMGVNPYAAFLPLFIQMPVLVALFQAL 146

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +  +E      + W+ +L   DPT                    I PI+ +L  F    +
Sbjct: 147 TR-VEFLKTGHFLWL-NLGTTDPTF-------------------ILPILAALFTFFSTWL 185

Query: 508 SPPPADKGQ---AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           S     +     A++   MPV+  F      +G+ +YW+ SN   + Q  ++   +  +I
Sbjct: 186 SNKALPEKNGGTAVMTYLMPVLIFFFAVYAASGVALYWTVSNAYQVGQTLLL--SNPFKI 243

Query: 565 GLIDRLRSTFSKN 577
                 ++   + 
Sbjct: 244 IAEREAKAKAERQ 256


>gi|116511365|ref|YP_808581.1| OxaA-like protein precursor [Lactococcus lactis subsp. cremoris
           SK11]
 gi|116107019|gb|ABJ72159.1| Preprotein translocase subunit YidC [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 320

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 97/276 (35%), Gaps = 39/276 (14%)

Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--- 375
            H    + +P         +   +      +  +  NL   +G  I+  T+ ++ L    
Sbjct: 27  THVVDGVRVPTEAATHGITYNLLVRPMSAFVDLFANNLHLGYGWGIIFVTLIIRFLILPL 86

Query: 376 -----FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--A 428
                +     Q           P  + L++          Q+A++   K + IN L   
Sbjct: 87  GLNQAYKSTYMQEKMAYLAPVFAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSI 146

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           GC P+L+Q P F A+Y   + +  +  + F+G                   +P   P   
Sbjct: 147 GCLPMLIQWPFFIALYNAAAYTTGISSSTFYG-------------------IPLGHPSI- 186

Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWM-PVVFVFALSSFPAGLIIYWSW 544
              +  II  +  FIQ  +S       Q      +  M P + V      PAG+ +YW+ 
Sbjct: 187 ---VLVIISGVLYFIQTWISTLSMTPEQKKSGMAMLIMSPAMIVVFSFMSPAGVALYWAV 243

Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
              + ++QQ +I  +   +  +  R+   F+KN   
Sbjct: 244 GGFVIVIQQVIITFIM--KPRMRRRIDEEFTKNPPK 277


>gi|241999556|ref|XP_002434421.1| cytochrome oxidase biogenesis protein, putative [Ixodes scapularis]
 gi|215497751|gb|EEC07245.1| cytochrome oxidase biogenesis protein, putative [Ixodes scapularis]
          Length = 426

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 82/227 (36%), Gaps = 31/227 (13%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  +  +   +   ++  G      I L TV VKLL FP   K   +T +M N  P++  
Sbjct: 123 WAPSGMVQHCLDLLHSSTGLPWWATIALGTVVVKLLVFPAILKGQKNTIHMNNHLPQMQV 182

Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           L+ K  ++               ++   K   INPL      ++Q PVF + +  +    
Sbjct: 183 LQAKLSEARSSVFVLDSARYANELMLFMKEKQINPLKNMIIPMVQAPVFISFFFALRGMA 242

Query: 452 EMRHAPF----WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
            +    F      W  DL   DP        +LP        V        +        
Sbjct: 243 NLPMESFKTGGMLWFTDLTIPDPYC------LLPLITIRLSRVVALGAESGV-------- 288

Query: 508 SPPPADKGQ--AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
               AD  Q    +   MP+V      +FPA L+ YW+ SN+ ++ Q
Sbjct: 289 ---RADNLQWTRYVFRAMPIVIFPFTMNFPAALLCYWATSNMFTLAQ 332


>gi|320161691|ref|YP_004174916.1| hypothetical protein ANT_22900 [Anaerolinea thermophila UNI-1]
 gi|319995545|dbj|BAJ64316.1| hypothetical membrane protein [Anaerolinea thermophila UNI-1]
          Length = 276

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 62/238 (26%), Positives = 115/238 (48%), Gaps = 21/238 (8%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK--IDE 398
            I     +L+  +  L  NFGIAI+L T+ ++L+  PL   Q   +  M  +Q      E
Sbjct: 6   IIQPFTNVLLLIYSYLGQNFGIAIILFTLLIRLITHPLMVSQIKGSQKMMELQNHPRYKE 65

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-----EM 453
           L+EK+K    Q LQ+   +L +   INP A C P+L+Q P+   +Y+ +  ++     ++
Sbjct: 66  LQEKYKN-DRQKLQEEQAKLIQELKINPFASCLPLLIQFPIIIGLYQSLYKAMPNTPHDL 124

Query: 454 RHAPFWGW-IKDLAAADPTNIFTLFGILP-----FYLPGFMHVGIWPIIMSLSMFIQMKM 507
            +     +   D+ A  P N   L+  L      +       + +  I+++L+ +IQ ++
Sbjct: 125 LNLTRILYSFVDINAILPINNQFLWMDLSQPERLYLPFLPFGIPVLAIVVALTTYIQGRL 184

Query: 508 -SPPPADKGQAMILN------WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            +PPP++      +       +MP +  +   +  +GL +Y+  SNVI I+Q A++ K
Sbjct: 185 ITPPPSNPNDQTAMMSGMMNLYMPFLMGYMGLTLASGLSLYFIVSNVIGILQYALLGK 242


>gi|331265592|ref|YP_004325222.1| preprotein translocase subunit YidC1 [Streptococcus oralis Uo5]
 gi|326682264|emb|CBY99881.1| preprotein translocase subunit YidC1 [Streptococcus oralis Uo5]
          Length = 277

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 108/256 (42%), Gaps = 29/256 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  D   F+      F  +  F +   + G+ I+L T+ ++ +  P+ + Q V++  M+
Sbjct: 31  DITADSTDFWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQMVASRKMQ 90

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L + M ++YK   I   +  WPIL+Q+PV  A+++ +
Sbjct: 91  EAQPRIKALREQYPGRDMESRTKLDQEMRKVYKELGIKHSSSLWPILIQMPVLLALFQAL 150

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L   D +                    + PI+ ++  F+   +
Sbjct: 151 SR-VDFLKTGHFLWI-NLGGVDTSF-------------------VLPILAAVFTFLSSWL 189

Query: 508 SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--KMHGA 562
           S     +       ++  MPV+      S P+G+ +YW+ SN   ++Q   +       A
Sbjct: 190 SNKALSEKSGATTGMMYGMPVLIFVFAISAPSGVALYWAVSNAYQVLQTYFLNNPFKIIA 249

Query: 563 EIGLIDRLRSTFSKNY 578
           E   + +         
Sbjct: 250 EREAVAQAEKDLEGKK 265


>gi|69247382|ref|ZP_00604326.1| 60 kDa inner membrane protein [Enterococcus faecium DO]
 gi|68194854|gb|EAN09327.1| 60 kDa inner membrane protein [Enterococcus faecium DO]
          Length = 308

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395
                +     N   ++G A++  TV V+++  PL   Q   T                 
Sbjct: 44  PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 103

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453
             +L+    +      Q  M Q+Y+ + ++     GC P+L+Q+P+F A+Y     +  +
Sbjct: 104 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 163

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R + F+G   DL +                        +   I  ++  +Q  +S     
Sbjct: 164 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 200

Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           + Q   +  M    P + VF   S PAG+ +YW    V S +Q  +   M   +  L  +
Sbjct: 201 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 258

Query: 570 LRSTFSKNYNSQ 581
           +     +N   Q
Sbjct: 259 VAEELKQNPPKQ 270


>gi|306834162|ref|ZP_07467282.1| membrane protein [Streptococcus bovis ATCC 700338]
 gi|304423735|gb|EFM26881.1| membrane protein [Streptococcus bovis ATCC 700338]
          Length = 306

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 83/240 (34%), Gaps = 27/240 (11%)

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           +   +          +  ++    +  L    + K    +  M  ++P  + + E+ + +
Sbjct: 51  YFANNVGLGFGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYLKPIFEPINERMRNA 110

Query: 407 PPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
             Q      Q  ++   K + IN L   GC P+L+Q+P F A+Y     +          
Sbjct: 111 TTQEEKLAAQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAAQYT---------- 160

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
                         + F  +           +  ++     ++ M+             +
Sbjct: 161 ---------QGVSESTFLGIDLGTRSIPLTAVIAVLYLFQSWLSMQGVAEEQRAAMKGTM 211

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
             MP++ VF   S PA +++YW      SI+QQ + M     +  L  ++ + F KN   
Sbjct: 212 YAMPLMMVFFGMSMPASVLLYWLVGGFFSIIQQLITM--LIIKPKLRQKIAAEFEKNPPK 269


>gi|307702545|ref|ZP_07639498.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037]
 gi|307623891|gb|EFO02875.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037]
          Length = 289

 Score =  108 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 108/256 (42%), Gaps = 29/256 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  D   F+      F  +  F +   + G+ I+L T+ ++ +  P+ + Q V++  M+
Sbjct: 29  DITADSTDFWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQMVASRKMQ 88

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L + M ++YK   I   +  WPIL+Q+PV  A+++ +
Sbjct: 89  EAQPRIKALREQYPGRDMESRTKLDQEMRKVYKELGIKHSSSLWPILIQMPVLLALFQAL 148

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L   D +                    + PI+ ++  F+   +
Sbjct: 149 SR-VDFLKTGHFLWI-NLGGVDTSF-------------------VLPILAAVFTFLSSWL 187

Query: 508 SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--KMHGA 562
           S     +       ++  MPV+      S P+G+ +YW+ SN   ++Q   +       A
Sbjct: 188 SNKALSEKSGATTGMMYGMPVLIFVFAISAPSGVALYWAVSNAYQVLQTYFLNNPFKIIA 247

Query: 563 EIGLIDRLRSTFSKNY 578
           E   + +         
Sbjct: 248 EREAVAQAEKDLEGKK 263


>gi|171780265|ref|ZP_02921169.1| hypothetical protein STRINF_02053 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281613|gb|EDT47048.1| hypothetical protein STRINF_02053 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 249

 Score =  108 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 82/235 (34%), Gaps = 35/235 (14%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL---- 411
                 +  ++    +  L    + K    +  M  ++P    + E+ + +  Q      
Sbjct: 5   FGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYLKPIFAPINERMRNATTQEEKLAA 64

Query: 412 QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
           Q  ++   K + IN L   GC P+L+Q+P F A+Y     +  +  +             
Sbjct: 65  QTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAAQYTQGVSGS------------- 111

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM----ILNWMPV 525
                  F  +           +  I+     F Q  +S     + Q       +  MP+
Sbjct: 112 ------TFLGIDLGSRSMPLTAVIAILY----FFQSWLSMQAVAEEQRAAMKGTMYVMPL 161

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           + VF   S PA +++YW      SI+QQ + M     +  L  ++   F KN   
Sbjct: 162 MMVFFGMSMPASVLLYWLVGGFFSIIQQLITM--FIIKPKLRKQIAEEFEKNPPK 214


>gi|296455143|ref|YP_003662287.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum
           subsp. longum JDM301]
 gi|296184575|gb|ADH01457.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum
           subsp. longum JDM301]
          Length = 335

 Score =  108 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 106/248 (42%), Gaps = 22/248 (8%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
              +     +       F  M     +  ++ +AI++  + V+   FPL  KQ  S   M
Sbjct: 20  LTPVEWLQTWIMKIVHDFFAMLGMSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKM 79

Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + + PK+  ++ K+K    Q     + +  ++LY+ ++ NP   C P+L+Q PVF +++ 
Sbjct: 80  QALAPKMQRIQNKYKGKTDQASKEAMSRETMKLYQDNDANPAGSCLPMLIQGPVFMSMFY 139

Query: 446 VISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPF-------YLPGFMHVGIWPIIM 497
            +S    +           D+A A       +FGI+            G + +GI+  +M
Sbjct: 140 TLSAIPYIANGKRDALGAFDVATAKQFTQTDVFGIVSVTDNFTRASTAGKVVIGIFVFLM 199

Query: 498 SLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
              +++   ++              +  Q  +L   PV+++F+  SFP  +++YW  +NV
Sbjct: 200 CFCLWLIQYINMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGVSFPFAVLVYWLTNNV 259

Query: 548 ISIVQQAV 555
            ++ +   
Sbjct: 260 CNLCRTLW 267


>gi|293364547|ref|ZP_06611270.1| SpoJ protein [Streptococcus oralis ATCC 35037]
 gi|322376167|ref|ZP_08050675.1| SpoIIIJ family protein [Streptococcus sp. C300]
 gi|291316959|gb|EFE57389.1| SpoJ protein [Streptococcus oralis ATCC 35037]
 gi|321278849|gb|EFX55894.1| SpoIIIJ family protein [Streptococcus sp. C300]
          Length = 277

 Score =  108 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 108/256 (42%), Gaps = 29/256 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  D   F+      F  +  F +   + G+ I+L T+ ++ +  P+ + Q V++  M+
Sbjct: 31  DITADSTDFWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQMVASRKMQ 90

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L + M ++YK   I   +  WPIL+Q+PV  A+++ +
Sbjct: 91  EAQPRIKALREQYPGRDMESRTKLDQEMRKVYKELGIKHSSSLWPILIQMPVLLALFQAL 150

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L   D +                    + PI+ ++  F+   +
Sbjct: 151 SR-VDFLKTGHFLWI-NLGGVDTSF-------------------VLPILAAVFTFLSSWL 189

Query: 508 SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--KMHGA 562
           S     +       ++  MPV+      S P+G+ +YW+ SN   ++Q   +       A
Sbjct: 190 SNKALSEKSGATTGMMYGMPVLIFVFAISAPSGVALYWAVSNAYQVLQTYFLNNPFKIIA 249

Query: 563 EIGLIDRLRSTFSKNY 578
           E   + +         
Sbjct: 250 EREAVAQAEKDLEGKK 265


>gi|302336545|ref|YP_003801752.1| membrane protein insertase, YidC/Oxa1 family [Olsenella uli DSM
           7084]
 gi|301320385|gb|ADK68872.1| membrane protein insertase, YidC/Oxa1 family [Olsenella uli DSM
           7084]
          Length = 252

 Score =  108 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/241 (20%), Positives = 106/241 (43%), Gaps = 15/241 (6%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            + +    +  ++       G++GIA+++ T  ++L+  PL  +   S+A M+ +QPK+ 
Sbjct: 1   MWDWFISFLMHVLESLAGWAGDWGIAVIILTFIMRLIVMPLMTRSTASSARMQALQPKMK 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           E++ ++    P+ + + M + Y  H  NPL GC P+L+Q+PVF A++ V        H  
Sbjct: 61  EIQNRYAD-DPERMNEEMRKFYSEHKFNPLGGCLPVLVQMPVFVALFTVAKNVPADAH-- 117

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
                  L+     +      +    + G +   ++ +   +   + M M+       Q 
Sbjct: 118 ------FLSIMPSLSQSAAGALASGGVAGALVYILFDVAFGVLTLVPMIMNLQNTSDEQR 171

Query: 518 M---IL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM--HGAEIGLIDRLR 571
               I+   M V+ ++   S P  +++Y+  S +  + QQ ++ +      +     +L 
Sbjct: 172 QQTLIMGVVMAVMMLWFGWSAPGAVLLYYDTSAIWQVAQQKIVTQRVMQKVKEETEAKLA 231

Query: 572 S 572
           S
Sbjct: 232 S 232


>gi|312128801|ref|YP_003993675.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311778820|gb|ADQ08306.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 341

 Score =  108 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 34/254 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
            W  F+A P+  L+   Y+ +       ++GIA++L T+ V+ L  PL  KQ  ST+ M 
Sbjct: 4   TWLDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSKMA 63

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            + P++ E+++K+K    + +Q+ M++LY+    NP  GCWP+L+Q+P+ F++Y V    
Sbjct: 64  EVAPRLQEIQQKYKN-DQKKMQEEMLKLYQETGYNPAGGCWPLLIQLPILFSLYYVFQNP 122

Query: 451 LEMRHAPFWGWIKDLAAA-----------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           L         ++KDL              D      L             + + PI+ + 
Sbjct: 123 LVYVLGKSHQYVKDLITGATGYNITQRIVDEAQKLGLDMHFFGINLAQKELIVLPILSAA 182

Query: 500 SMFIQ----------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
             F+                    S   A+     ++ + P++  F     P+GL++YW+
Sbjct: 183 FSFLSILYSMNSQKKFNPQYSQSQSNAMAESMNKSLMIFSPLMSYFIALQVPSGLVLYWT 242

Query: 544 WSNVISIVQQAVIM 557
            +N+ +I+QQ +  
Sbjct: 243 VTNLFTILQQFIAN 256


>gi|323128077|gb|ADX25374.1| hypothetical protein SDE12394_09760 [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 269

 Score =  108 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 110/233 (47%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+       +     +F     + +  G+ G+ I+L T+ ++LL  PL   Q  S+  M+
Sbjct: 24  EVTAQSTSGWDQMVYLFARAIQWLSFDGSIGVGIILFTLIIRLLLMPLFNMQIKSSQKMQ 83

Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           +IQP++ EL++K+          L +    LYK + +NP A   P+L+Q+PV  A+++ +
Sbjct: 84  DIQPELRELQKKYAGKDTETRMKLAEESQALYKKYGVNPYASLMPLLIQMPVMIALFQAL 143

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +    ++    + W++ LA  D                   H+ I P++ +L  F+   +
Sbjct: 144 TRVPFLK-TGTFLWVE-LAQHD-------------------HLYILPVLAALFTFLSTWL 182

Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +   A   +    +++  MP++  F   +  +G+++YW+ SN   +VQ  ++ 
Sbjct: 183 TNLAAREKNIMMTIMIYVMPLMIFFMGFTLASGVVLYWTVSNAFQVVQLLLLN 235


>gi|257867718|ref|ZP_05647371.1| inner membrane protein [Enterococcus casseliflavus EC30]
 gi|257874045|ref|ZP_05653698.1| inner membrane protein [Enterococcus casseliflavus EC10]
 gi|257876623|ref|ZP_05656276.1| inner membrane protein [Enterococcus casseliflavus EC20]
 gi|257801801|gb|EEV30704.1| inner membrane protein [Enterococcus casseliflavus EC30]
 gi|257808209|gb|EEV37031.1| inner membrane protein [Enterococcus casseliflavus EC10]
 gi|257810789|gb|EEV39609.1| inner membrane protein [Enterococcus casseliflavus EC20]
          Length = 306

 Score =  108 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 99/259 (38%), Gaps = 39/259 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394
             + + +     M+     N   ++G AI+  T+ V+++  PL   Q   T         
Sbjct: 34  MIYRFLVKPLGDMITMLVENFNWSYGWAIIAVTIVVRVIILPLGIHQSRKTMVQSEKMQF 93

Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
                      L++   +      Q  M ++Y  +N++     GC P+L+Q+P+F A+Y 
Sbjct: 94  LKPQVDIAQANLKKATTREEQMQAQAEMQKIYSENNVSMFGGIGCLPLLIQMPIFSALYF 153

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  ++++ F+G    ++  DP+ +F     L +   G++     P           
Sbjct: 154 TARYTQGIQNSEFFG----VSLGDPSILFVAIAGLSYLAQGYISTIGIP----------- 198

Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
                   + Q   +  M    P++ VF   S PAG+ +YW    V S +Q  +   +  
Sbjct: 199 --------EEQKKTMKTMLIVSPLMIVFMSMSAPAGVTLYWVVGGVFSCIQTFITNVIM- 249

Query: 562 AEIGLIDRLRSTFSKNYNS 580
            +  +  ++ +    N   
Sbjct: 250 -KPKIRAQVEAEMKANPPK 267


>gi|269838379|ref|YP_003320607.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus
           DSM 20745]
 gi|269787642|gb|ACZ39785.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 278

 Score =  108 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 31/230 (13%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +      +   +     + G+ G+A++L T+ +K+   P+  +   STA ++ IQP + E
Sbjct: 4   WEQFVDLIAGGLQGLAAVTGSAGLAVILFTLLLKIALLPITVRTRRSTAALRAIQPALRE 63

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEMRH 455
           L+EK+     Q      ++LY+ H INP AGC P +++IP F  +   I     S +   
Sbjct: 64  LQEKYPD-DRQRRSAETLKLYQQHGINPAAGCLPTVIKIPFFIGLIAAIRELSRSGDGAW 122

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-- 513
              + W+ DLA ADP +                   I PI   L   +   M+ P     
Sbjct: 123 TESFLWLPDLATADPLH-------------------ILPIAAGLFQLLTGMMARPAGQRG 163

Query: 514 ----KGQAMILNWM--PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
               KGQA     +  P + V      PAG ++YW+ S + SI +Q ++ 
Sbjct: 164 AARGKGQARAGLALLSPAIVVAIGWHAPAGPVLYWAVSALFSIGEQWLMT 213


>gi|319949435|ref|ZP_08023496.1| putative inner membrane protein translocase component YidC [Dietzia
           cinnamea P4]
 gi|319436897|gb|EFV91956.1| putative inner membrane protein translocase component YidC [Dietzia
           cinnamea P4]
          Length = 400

 Score =  108 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 53/288 (18%), Positives = 106/288 (36%), Gaps = 49/288 (17%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           +++ I   +  L+ +      N   + ++++   V ++ L F  A KQ   +  M+ +QP
Sbjct: 19  FWHKIFAFLGGLLPWVEAPDSNGVIWALSVIFLVVTLRALLFWPAAKQIRFSRKMQELQP 78

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI------- 447
           K+ EL++++K    ++      +L K    NPL GC P+L+QIPVF  ++ V+       
Sbjct: 79  KMKELQKRYKNDREKLAV-ETRKLQKQEGFNPLLGCLPMLIQIPVFLGLFHVLRSFNRMG 137

Query: 448 --------------------SISLE--------MRHAPFWGWIKDLAAADPTNIFTLFGI 479
                                 + E        +  AP   +I          +     +
Sbjct: 138 EQFGALGMTAEETRNTGNYVFNADEVQSFLDARLFGAPLSSFISQPVEQFQAFVEPGAAL 197

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQ-----MKMSPPPADKGQAMILN-----WMPVVFVF 529
                   +      II +++          + SP  A   QA I+N       P+  + 
Sbjct: 198 DFARWNIILVAVPLMIISAVTTHFNARVSLSRQSPEAAANPQAKIMNQLMLWAFPIGILV 257

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
             + +P  +++Y   +N+ ++ QQ  + +    E       R    K 
Sbjct: 258 TGAFWPMAILVYMVTNNLWTLGQQYFLYERMAKEDDAAALARREEQKA 305


>gi|291517735|emb|CBK71351.1| Preprotein translocase subunit YidC [Bifidobacterium longum subsp.
           longum F8]
          Length = 305

 Score =  108 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 102/231 (44%), Gaps = 22/231 (9%)

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F  M     +  ++ +AI++  + V+   FPL  KQ  S   M+ + PK+  ++ K+K  
Sbjct: 7   FFAMLGMSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKMQALAPKMQRIQNKYKGK 66

Query: 407 PPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR-HAPFWGW 461
             Q  ++      ++LY+ +++NP   C P+L+Q PVF +++  +S    +         
Sbjct: 67  TDQASREAMSRETMKLYQDNDVNPAGSCLPMLIQGPVFMSMFYTLSAIPYIANGKRDALG 126

Query: 462 IKDLAAADPTNIFTLFGILPF-------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
             D+A A       +FGI+            G + +GI+  +M   ++     +      
Sbjct: 127 AFDVATAKQFTQTDVFGIVSVTDNFTRASTAGKVVIGIFVFLMCFCLWFMQYFNMKRNMP 186

Query: 515 ----------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
                      Q  +L   PV+++F+ ++ P  +++YW  +NV ++ +   
Sbjct: 187 AASMNKQAETMQKAMLWLFPVMYIFSGATMPFAVLVYWLTNNVCNLCRTLW 237


>gi|240168405|ref|ZP_04747064.1| putative inner membrane protein translocase component YidC
           [Mycobacterium kansasii ATCC 12478]
          Length = 381

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 104/278 (37%), Gaps = 39/278 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            + +     +          + +  +    + +++M     ++ L +    +Q  +T  M
Sbjct: 10  LDFVYYPVSWIMWVWYKLFALIFGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 69

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-- 447
           + +QP+I  L++K+     Q +   M +L + H  NP+ GC P+L QIPVF  +Y V+  
Sbjct: 70  QELQPQIKALQKKY-GKDRQRMAMEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 128

Query: 448 ------------SISLEMRHAPFWGWIK-DLAAADPTNIF------------TLFGILPF 482
                          +E R    + +   D+      N+F             L   + F
Sbjct: 129 FNRTTGGFGQPQMSVVENRLTGNYVFTPTDVGHFLDANLFGAPIGASMTQRGGLDAFVDF 188

Query: 483 YLPGFMHVGI-WPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMPVVFVFAL 531
             P  + VG+   I+  ++ +        + SP  A   Q  ++        P+  V   
Sbjct: 189 SRPAVIAVGVPVMILAGIATYFNSRASIARQSPEAAANPQTAMMNKLALYVFPLGVVVGG 248

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
              P  +I+YW  +N+ +  QQ  +  M   E     +
Sbjct: 249 PFLPLAIILYWFSNNIWTFAQQHYVFGMIEKEDEAKRQ 286


>gi|25011697|ref|NP_736092.1| OxaA-like protein precursor [Streptococcus agalactiae NEM316]
 gi|38503012|sp|Q8E3U9|OXAA2_STRA3 RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|24413237|emb|CAD47316.1| Unknown [Streptococcus agalactiae NEM316]
          Length = 310

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 77/213 (36%), Gaps = 27/213 (12%)

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL-- 427
           L    + K       M   +P  + + E+ + +  Q      Q  ++   + + ++    
Sbjct: 78  LGLYQSWKASYQAEKMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGG 137

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487
            GC P+L+Q+P F AI+     +                   P      F  L       
Sbjct: 138 IGCLPLLIQMPFFSAIFFAARYT-------------------PGVSSATFLGLNLGQKSL 178

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
               I  I+  +  ++ M+  P    +    ++  MP+  VF   S PA + +YW    +
Sbjct: 179 TLTVIIAILYFVQSWLSMQGVPDEQRQQMKTMMYVMPIAMVFMSISLPASVALYWFIGGI 238

Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            SI+QQ V    +  +  L  ++   ++KN   
Sbjct: 239 FSIIQQLVTT--YVLKPKLRRKVEEEYTKNPPK 269


>gi|282851875|ref|ZP_06261237.1| putative stage III sporulation protein J [Lactobacillus gasseri
           224-1]
 gi|282556982|gb|EFB62582.1| putative stage III sporulation protein J [Lactobacillus gasseri
           224-1]
          Length = 256

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 21/254 (8%)

Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367
           +   A               P      +W   Y +      ++     +  ++G AI++ 
Sbjct: 19  MLTLALVVTGCASTNGSSVAPISHTSGNWWDRYIVYYISQFILWIASLVRDSYGWAIIIF 78

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNI 424
           T+ V+++  PL      S A  + +QP++D LR+K+        Q LQ+   +LYK   I
Sbjct: 79  TIIVRIILLPLNAISIKSMAKQQKVQPQMDALRKKYPGKDVESRQKLQEETSKLYKEAGI 138

Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484
           NP  GC P+L+Q+PV +A+Y+ I  + ++     + W+ DL   DP  I       P   
Sbjct: 139 NPYTGCLPMLIQLPVMYALYQAIWRTPQL-QNGRFLWM-DLGRPDPYYIM------PVLA 190

Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWS 543
             F  +         S +I    +P  +  G    + + MP++   +     + + +YW 
Sbjct: 191 AAFTFI---------STYISQMSTPQSSQNGMTKGMTYLMPLIIGVSAIGIQSAISLYWV 241

Query: 544 WSNVISIVQQAVIM 557
            SN+  +VQ  ++ 
Sbjct: 242 ISNLFQVVQTFILQ 255


>gi|257879967|ref|ZP_05659620.1| inner membrane protein [Enterococcus faecium 1,230,933]
 gi|257814195|gb|EEV42953.1| inner membrane protein [Enterococcus faecium 1,230,933]
          Length = 309

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395
                +     N   ++G A++  TV V+++  PL   Q   T                 
Sbjct: 45  PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453
             +L+    +      Q  M Q+Y+ + ++     GC P+L+Q+P+F A+Y     +  +
Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R + F+G   DL +                        +   I  ++  +Q  +S     
Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201

Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           + Q   +  M    P + VF   S PAG+ +YW    V S +Q  +   M   +  L  +
Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259

Query: 570 LRSTFSKNYNSQ 581
           +     +N   Q
Sbjct: 260 VAEELKQNPPKQ 271


>gi|315222384|ref|ZP_07864289.1| putative stage III sporulation protein J [Streptococcus anginosus
           F0211]
 gi|315188545|gb|EFU22255.1| putative stage III sporulation protein J [Streptococcus anginosus
           F0211]
          Length = 271

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 27/218 (12%)

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
             F +   F +  G+ GI I+L T+ ++ +  P+ + Q  ++  M+  QP + EL+ K+ 
Sbjct: 39  YFFAVTIRFLSFNGSTGIGIILFTLIIRTVLLPVFQLQINASRKMQEAQPLVKELQAKYP 98

Query: 405 QSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
               +    L +   +LYK   + P A  WP+L+Q+PV  A+Y  ++  +E      + W
Sbjct: 99  GRDMESRSRLAEETQKLYKELGVKPSASFWPLLIQMPVLIALYHALTR-VEFLKVGHFLW 157

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAM 518
           + +L A DP                     I P++ ++  F+   +S       +     
Sbjct: 158 L-NLGATDPYY-------------------ILPVLAAVFTFLSTWLSNKGMAERNGLMTG 197

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           ++  MP+   F   S  +G+ +YWS S    + Q  ++
Sbjct: 198 MMFVMPLFVFFFAMSVASGVALYWSTSYAYQVFQTLLL 235


>gi|302531354|ref|ZP_07283696.1| preprotein translocase YidC subunit [Streptomyces sp. AA4]
 gi|302440249|gb|EFL12065.1| preprotein translocase YidC subunit [Streptomyces sp. AA4]
          Length = 375

 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 102/262 (38%), Gaps = 44/262 (16%)

Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++  ++ +           ++ + I+  T  V+ + F     Q  S   
Sbjct: 1   MLDFIYYPVSFILWCWHKVFGFVFGEATAISWILGIIFLTFTVRGIMFKPFVNQVRSMKK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M++  P++ ++++K+     Q   + M +L + H +NPL  C P++LQIPVF  +  V+ 
Sbjct: 61  MQDFAPEMKKIQKKYAN-DRQRQAQEMQKLQREHGVNPLGSCLPMILQIPVFIGLNHVLR 119

Query: 449 ISLEM-------RHAPFWGWIKDLAAADPTNIFTL----------------FGILPFYLP 485
            +  M       +   ++    D+ +     +F +                     ++  
Sbjct: 120 -AFTMPPAGGGPKTENYFFNEHDVNSYVSAKLFGVNMGEAVNNGVGAVAGHVANGGWHWE 178

Query: 486 GFMHVGIWPIIMSLSMFIQ-----MKMSPPPADKGQAMIL-----NWMPVVFVFALSSFP 535
                    II S++  +       + +   A   Q  I+        P+  +   + FP
Sbjct: 179 VLPVALPLMIIASIATHLTARHSVSRQNASAAGTPQTAIMNKLTMYVFPLGVLVFGAFFP 238

Query: 536 AGLIIYWSWSNVISIVQQAVIM 557
            GL+ YW  +N  +++QQ ++ 
Sbjct: 239 LGLLFYWLANNGWTLMQQRLVY 260


>gi|77408490|ref|ZP_00785228.1| SpoIIIJ family protein [Streptococcus agalactiae COH1]
 gi|77172932|gb|EAO76063.1| SpoIIIJ family protein [Streptococcus agalactiae COH1]
          Length = 266

 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 79/213 (37%), Gaps = 27/213 (12%)

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL-- 427
           L    + K       M   +P  + + E+ + +  Q      Q  ++   + + ++    
Sbjct: 34  LGLYQSWKASYQAEKMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGG 93

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487
            GC P+L+Q+P F AI+     +                   P      F  L       
Sbjct: 94  IGCLPLLIQMPFFSAIFFAARYT-------------------PGVSSATFLGLNLGQKSL 134

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
           +   I  I+  +  ++ M+  P    +    ++  MP++ VF   S PA + +YW    +
Sbjct: 135 ILTVIIAILYFVQSWLSMQGVPDEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGI 194

Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            SI+QQ V    +  +  L  ++   ++KN   
Sbjct: 195 FSIIQQLVTT--YVLKPKLRRKVEEEYTKNPPK 225


>gi|312794741|ref|YP_004027664.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312181881|gb|ADQ42051.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 341

 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 34/254 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
            W  F+A P+  L+ + Y+ +       ++GIA++L T+ V+ L  PL  KQ  ST+ M 
Sbjct: 4   TWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSKMA 63

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            + P++ E+++K+K    ++ Q+ M++LY+    NP  GCWP+L+Q P+ FA+Y V    
Sbjct: 64  EVAPRLQEIQQKYKNDQRKM-QEEMLKLYQETGYNPAGGCWPLLIQAPILFALYYVFQNP 122

Query: 451 LEMRHAPFWGWIKDLAAA-----------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           L         +++DL              D      L             + + PI+ + 
Sbjct: 123 LVYVLGKSHQYVRDLITGATGYAITQRIVDEAQKLGLDMHFFGINLAQKELIVLPILSAA 182

Query: 500 SMFIQ----------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
             F+                    S   A+     ++ + P++  F     P+GL++YW+
Sbjct: 183 FSFLSILYSMNSQKKFNPQYSQSQSNAMAESMNRSLMIFSPLMSYFIALQVPSGLVLYWT 242

Query: 544 WSNVISIVQQAVIM 557
            SN+  I+QQ +  
Sbjct: 243 VSNLFQILQQFIAN 256


>gi|329117705|ref|ZP_08246422.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           parauberis NCFD 2020]
 gi|326908110|gb|EGE55024.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           parauberis NCFD 2020]
          Length = 310

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 71/212 (33%), Gaps = 31/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +  + +            P    ++    Q      Q  ++   K + IN L   GC P
Sbjct: 83  SWKASYQSEKMAYLKPIFDPINQRMKNASTQEEKFAAQSDLMAAQKANGINMLGGMGCLP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +L+Q+P F A+Y     +                        + F  +          GI
Sbjct: 143 LLIQMPFFSAMYFAAMYT-------------------KGISTSTFMGIDLGSRSLALTGI 183

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
             I+     F Q  +S     + Q      ++  MP++ +F   S PAG+ +YW      
Sbjct: 184 IAILY----FFQSWLSMQAVAEEQRAQMKTMMYTMPIMMIFMTLSLPAGVGLYWLVGGFF 239

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           SI+QQ +    +  +  L  ++   +  N   
Sbjct: 240 SIIQQLITT--YIIKPKLRQKIEEEYKNNPPK 269


>gi|307185547|gb|EFN71509.1| Mitochondrial inner membrane protein OXA1L [Camponotus floridanus]
          Length = 413

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 97/267 (36%), Gaps = 40/267 (14%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKN 391
            I     Y     +   + + +          I++ T+ V++L FP+  K   +  N  N
Sbjct: 107 SIGLASSYTPVGLIQKFLEFMHISCDIPWWTTIVIGTICVRVLIFPIVIKAQKNMINFSN 166

Query: 392 IQPKIDELREKF-------KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
             P I EL+ K               +   M+Q  K ++++P+      L+Q PVF + +
Sbjct: 167 CMPVITELQMKMTEARQNGDHFESARIANEMMQYMKKNDVSPVKNFIVPLIQAPVFLSFF 226

Query: 445 KVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             +       +E      + W+ DL   DP                     I PI+ S++
Sbjct: 227 LALRGMANTPVESLKYGGFWWLHDLTVHDPYY-------------------IMPIVTSVT 267

Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA-- 554
           M+I +++     +     +  +    +P + +  +  FP  ++ YW  +N +S+VQ    
Sbjct: 268 MYITIELGADGTNLKSMGMFRYVLRAVPFIILPFMIHFPGAILTYWVSTNFVSLVQTGIL 327

Query: 555 ---VIMKMHGAEIGLIDRLRSTFSKNY 578
               + K       +  +  +   K  
Sbjct: 328 KVPYVRKTLDMPTRIKHKSAADGKKKN 354


>gi|262204659|ref|YP_003275867.1| membrane protein insertase, YidC/Oxa1 family [Gordonia bronchialis
           DSM 43247]
 gi|262088006|gb|ACY23974.1| membrane protein insertase, YidC/Oxa1 family [Gordonia bronchialis
           DSM 43247]
          Length = 411

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 56/300 (18%), Positives = 116/300 (38%), Gaps = 59/300 (19%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN------------FGIAIMLTTVFVKLLFFPLAKKQYVS 385
              FI  P+  +M  ++ L  +            + ++++     ++ + +    KQ  +
Sbjct: 1   MLNFIYYPVSGIMWVWHWLFDHILPNSPGGDGVAWALSVVFLVFTLRAILYKPFVKQIRT 60

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           T  M+ I P++  +R+K+ +   ++  + M +L K H  NPL GC P+LLQIPVF  ++ 
Sbjct: 61  TKKMQEINPELQAIRKKYAKDRVKM-TEEMQKLQKEHGFNPLLGCLPMLLQIPVFIGLFH 119

Query: 446 VI--------------SISLEMRHAPFWGWIKD--------------LAAA--DPTNIFT 475
           V+                  E R+ P + +  D              L++    P   + 
Sbjct: 120 VLRSFNRTATGMGQLGMSPTETRNTPNYFFSVDQVQNFLDARLFGVPLSSFITQPVTEWQ 179

Query: 476 LF---GILPFYLPGFMHVGIWP--IIMSLSMFIQMKMSPPPADKG-----QAMIL----- 520
            F   G    +    + + + P  II S++  +  + S     +      Q  ++     
Sbjct: 180 AFVNPGEPIDFTRVQIAIVVVPMMIIASIATHMNSRASVARQPEAALENPQTRMMNMLAL 239

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
              P+  +     FP  +++YW  +N+ +  QQ ++     A+     +L        N+
Sbjct: 240 YIFPLGILVTGPFFPVAILLYWMSNNIWTYGQQHLVFGRI-AKEEEEAKLAKQEKLKANA 298


>gi|257886890|ref|ZP_05666543.1| inner membrane protein [Enterococcus faecium 1,141,733]
 gi|293568628|ref|ZP_06679943.1| membrane protein OxaA 2 [Enterococcus faecium E1071]
 gi|293571649|ref|ZP_06682670.1| membrane protein OxaA 2 [Enterococcus faecium E980]
 gi|257822944|gb|EEV49876.1| inner membrane protein [Enterococcus faecium 1,141,733]
 gi|291588588|gb|EFF20421.1| membrane protein OxaA 2 [Enterococcus faecium E1071]
 gi|291608319|gb|EFF37620.1| membrane protein OxaA 2 [Enterococcus faecium E980]
          Length = 316

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395
                +     N   ++G A++  TV V+++  PL   Q   T                 
Sbjct: 45  PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453
             +L+    +      Q  M Q+Y+ + ++     GC P+L+Q+P+F A+Y     +  +
Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R + F+G   DL +                        +   I  ++  +Q  +S     
Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201

Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           + Q   +  M    P + VF   S PAG+ +YW    V S +Q  +   M   +  L  +
Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259

Query: 570 LRSTFSKNYNSQ 581
           +     +N   Q
Sbjct: 260 VAEELKQNPPKQ 271


>gi|50955953|ref|YP_063241.1| putative inner membrane protein translocase component YidC
           [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50952435|gb|AAT90136.1| preprotein translocase, YidC subunit [Leifsonia xyli subsp. xyli
           str. CTCB07]
          Length = 324

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 112/262 (42%), Gaps = 36/262 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGN----------FGIAIMLTTVFVKLLFFPLAKKQYVST 386
              + I   + +++  ++ L+            + ++I+  T+ V+    P+  +Q  + 
Sbjct: 6   TLLWPIKWVVELILVAWHWLLYQVGFDPAAGLTWVLSIVGLTIVVRAALIPVFFRQIKNQ 65

Query: 387 ANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
             M  I P++ ++++K+K    Q     + +  + LYK    NPL+ C P+LLQ+PVFFA
Sbjct: 66  RRMLEIAPQLKKIQDKYKGKKDQFSREAMSRETMDLYKKTGTNPLSSCLPLLLQMPVFFA 125

Query: 443 IYKVISISLEMRHAPFWGWIKDLA-----------AADPTNIFTLFGILPFYLPGFMHVG 491
           +++V++ + +  HA        LA           A    +        P      +   
Sbjct: 126 LFQVLNGA-QGGHAGVGPLNSGLAEQFGSATLFGVAPLHQSFQGAMNANPVQTSVVIIAA 184

Query: 492 IWPIIMSLSMFIQMKM---------SPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIY 541
           I  + M+ S FI             +       Q  IL ++ P VF+F+  +FP G++ Y
Sbjct: 185 IMVVFMTGSQFITQLQIVSKNTSPETKASPQFKQQRILLYLLPFVFLFSGFAFPLGVMFY 244

Query: 542 WSWSNVISIVQQAVIMKMHGAE 563
           W  SN  ++ QQ ++++     
Sbjct: 245 WLTSNFWTMGQQFLVIRNMPTP 266


>gi|325688910|gb|EGD30918.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis
           SK115]
          Length = 271

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 29/232 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409
            F +  G+ GI I+L T+ ++ +  P+ + Q  S+  ++ +QP I  L+EK+     +  
Sbjct: 46  RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESR 105

Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L +   +LYK   +NP A   P+ +Q+PV  A+++ ++  ++      + W+ +L A 
Sbjct: 106 TALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525
           DPT                    I P++ +L  F+   +S       + G  +++  +PV
Sbjct: 164 DPTF-------------------ILPLLAALFTFLSTWLSNKALPERNGGMTVMMYLLPV 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
              F      +G+ +YW+ SN   +VQ  ++   +  +I      +    + 
Sbjct: 205 AIFFFALYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254


>gi|257890476|ref|ZP_05670129.1| inner membrane protein [Enterococcus faecium 1,231,410]
 gi|257826836|gb|EEV53462.1| inner membrane protein [Enterococcus faecium 1,231,410]
          Length = 316

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 91/252 (36%), Gaps = 39/252 (15%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395
                +     N   ++G A++  TV V+++  PL   Q   T                 
Sbjct: 45  PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453
             +L+    +      Q  M Q+Y+ + ++     GC P+L+Q+P+F A+Y     +  +
Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R +    +  DL +                        +  +I  ++  +Q  +S     
Sbjct: 165 RESS--FYSIDLGSP---------------------SMVLVVIAGVAYLLQGYISTIGIP 201

Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           + Q   +  M    P + VF   S PAG+ +YW    V S +Q  +   M   +  L  +
Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259

Query: 570 LRSTFSKNYNSQ 581
           +     +N   Q
Sbjct: 260 VAEELKQNPPKQ 271


>gi|257884106|ref|ZP_05663759.1| inner membrane protein [Enterococcus faecium 1,231,501]
 gi|257819944|gb|EEV47092.1| inner membrane protein [Enterococcus faecium 1,231,501]
          Length = 316

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395
                +     N   ++G A++  TV V+++  PL   Q   T                 
Sbjct: 45  PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453
             +L+    +      Q  M Q+Y+ + ++     GC P+L+Q+P+F A+Y     +  +
Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R + F+G   DL +                        +   I  ++  +Q  +S     
Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201

Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           + Q   +  M    P + VF   S PAG+ +YW    V S +Q  +   M   +  L  +
Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259

Query: 570 LRSTFSKNYNSQ 581
           +     +N   Q
Sbjct: 260 VAEELKQNPPKQ 271


>gi|76787291|ref|YP_329128.1| membrane protein oxaA [Streptococcus agalactiae A909]
 gi|77407082|ref|ZP_00784085.1| SpoIIIJ family protein [Streptococcus agalactiae H36B]
 gi|76562348|gb|ABA44932.1| membrane protein oxaA, putative [Streptococcus agalactiae A909]
 gi|77174313|gb|EAO77179.1| SpoIIIJ family protein [Streptococcus agalactiae H36B]
          Length = 271

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 99/212 (46%), Gaps = 27/212 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409
            + +   + G+ I+L T+ ++ +  PL   Q  S+  M+ IQP++ EL++K+    P   
Sbjct: 46  QWLSFNHSIGLGIILFTLIIRAIMMPLYNMQMKSSQKMQEIQPRLKELQKKYPGKDPDSR 105

Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L   M  +YK   +NP A   P+L+Q+PV +A+++ ++    ++   F     +L+  
Sbjct: 106 LKLNDEMQSMYKAEGVNPYASVLPLLIQLPVLWALFQALTRVSFLKVGTFLS--LELSQP 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ---AMILNWMPV 525
           DP                     I P++ +L  F+   ++   A +      ++   MP+
Sbjct: 164 DPYY-------------------ILPVLAALFTFLSTWLTNKAAVEKNIALTLMTYVMPL 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           + +    +F +G+++YW+ SN   + Q  ++ 
Sbjct: 205 IILVTSFNFASGVVLYWTVSNAFQVFQILLLN 236


>gi|294616351|ref|ZP_06696144.1| membrane protein OxaA 2 [Enterococcus faecium E1636]
 gi|291590865|gb|EFF22581.1| membrane protein OxaA 2 [Enterococcus faecium E1636]
          Length = 316

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 91/252 (36%), Gaps = 39/252 (15%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395
                +     N   ++G A++  TV V+++  PL   Q   T                 
Sbjct: 45  PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453
             +L+    +      Q  M Q+Y+ + ++     GC P+L+Q+P+F A+Y     +  +
Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R + F+G   DL +                        +   I  ++  +Q  +S     
Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201

Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           + Q   +  M    P + VF   S PAG+ +YW    V S +Q  +   M   +  L  +
Sbjct: 202 EEQKKTMRTMLIVSPALIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259

Query: 570 LRSTFSKNYNSQ 581
           +     K    Q
Sbjct: 260 VAEELKKKPPKQ 271


>gi|169632026|ref|YP_001705675.1| putative inner membrane protein translocase component YidC
           [Mycobacterium abscessus ATCC 19977]
 gi|169243993|emb|CAM65021.1| Membrane protein OxaA [Mycobacterium abscessus]
          Length = 361

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 56/296 (18%), Positives = 104/296 (35%), Gaps = 43/296 (14%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
           D     F      G  +   K    L+         + +++M     ++ + +    +Q 
Sbjct: 3   DWFNLGFIYYPVSGIMWVWYKLFAYLLGPKNFFA--WALSVMFLVFTLRAILYKPFVRQI 60

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            +T  M+ +QP+I  L++K+K    Q +   M +L + H  NP+ GC P+L QIPVF  +
Sbjct: 61  RTTRQMQELQPQIKALQKKYKN-DRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGL 119

Query: 444 YKVISI-------------SLEMRHAP--FWGWIKDLA---------AADPTNIFTLFGI 479
           + V+               ++E   A   ++    D+A         A     +    G+
Sbjct: 120 FHVLRSFNRTTGGFGQVHMTVEANRATGNYFFSANDVANFLDANLFGAPLGATMIQTTGL 179

Query: 480 LPFYLPGFMHVG----IWPIIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWMPV 525
             F     + V        II  ++ +   +      SP      Q  I+        P+
Sbjct: 180 DAFTEFNRLAVAGVSIPLMIIAGVATYFNSRASIARQSPEAQANPQTQIMNRLALYVFPL 239

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR--LRSTFSKNYN 579
             V      P  +I+YW  +N+ +  QQ  +      E     +  L    +    
Sbjct: 240 GVVVGGPFLPIAIILYWVSNNIWTFGQQHYVFNRIAKEEEEKKQADLERRAANAPK 295


>gi|315611930|ref|ZP_07886848.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis ATCC
           49296]
 gi|315315919|gb|EFU63953.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis ATCC
           49296]
          Length = 277

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 108/256 (42%), Gaps = 29/256 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  D   F+      F  +  F +   + G+ I+L T+ ++ +  P+ + Q V++  M+
Sbjct: 31  DITADSTDFWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQMVASRKMQ 90

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L + M ++YK   I   +  WPIL+Q+PV  A+++ +
Sbjct: 91  EAQPRIKALREQYPGRDMESRTQLDQEMRKVYKELGIKHSSSLWPILIQMPVLLALFQAL 150

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L   D +                    + PI+ ++  F+   +
Sbjct: 151 SR-VDFLKTGHFLWI-NLGGVDTSF-------------------VLPILAAVFTFLSSWL 189

Query: 508 SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--KMHGA 562
           S     +       ++  MPV+      S P+G+ +YW+ SN   ++Q   +       A
Sbjct: 190 SNKALSEKSGATTGMMYGMPVLIFVFAISAPSGVALYWAVSNAYQVLQTYFLNNPFKIIA 249

Query: 563 EIGLIDRLRSTFSKNY 578
           E   + +         
Sbjct: 250 EREAVAQAEKDLEGKK 265


>gi|257893080|ref|ZP_05672733.1| inner membrane protein [Enterococcus faecium 1,231,408]
 gi|257829459|gb|EEV56066.1| inner membrane protein [Enterococcus faecium 1,231,408]
          Length = 316

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395
                +     N   ++G A++  TV V+++  PL   Q   T                 
Sbjct: 45  PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453
             +L+    +      Q  M Q+Y+ + ++     GC P+L+Q+P+F A+Y     +  +
Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R + F+G   DL +                        +   I  ++  +Q  +S     
Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201

Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           + Q   +  M    P + VF   S PAG+ +YW    V S +Q  +   M   +  L  +
Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259

Query: 570 LRSTFSKNYNSQ 581
           +     +N   Q
Sbjct: 260 VAEELKQNPPKQ 271


>gi|291455688|ref|ZP_06595078.1| membrane protein OxaA [Bifidobacterium breve DSM 20213]
 gi|291382616|gb|EFE90134.1| membrane protein OxaA [Bifidobacterium breve DSM 20213]
          Length = 336

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 109/248 (43%), Gaps = 22/248 (8%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
              +     +       F +M     +  ++ +AI++  + V+   FPL  KQ  S   M
Sbjct: 21  LTPVEWLQTWIMKIVHDFFVMLGMSPVGVSWILAIIILVLVVQACIFPLFYKQIKSMRKM 80

Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + + PK+  ++ K+K    Q     + +  ++LY+ +N+NP   C P+L+Q PVF +++ 
Sbjct: 81  QALAPKMQRIQNKYKGKTDQASKEAMSRETMKLYQDNNVNPAGSCLPMLIQGPVFMSMFY 140

Query: 446 VISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIM 497
            +S    +           D+A A       +FGI+            G + +G++  +M
Sbjct: 141 TLSAIPYIANGKRDPLGAFDVATAKQFTQTDVFGIVSVTDNFTRAATAGKVVIGVFVFLM 200

Query: 498 SLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
              +++   ++              +  Q  +L   PV+++F+ +SFP  +++YW  +NV
Sbjct: 201 CFCLWLMQYINMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGASFPFAVLVYWLTNNV 260

Query: 548 ISIVQQAV 555
            ++ +   
Sbjct: 261 CNLCRTLW 268


>gi|158294169|ref|XP_315429.4| AGAP005421-PA [Anopheles gambiae str. PEST]
 gi|157015441|gb|EAA11925.4| AGAP005421-PA [Anopheles gambiae str. PEST]
          Length = 419

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 88/265 (33%), Gaps = 50/265 (18%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     +   M + +  +       I + TV V+ L FPL      + A M N  P++  
Sbjct: 115 WTPVGIVQNCMEFLHIGLDLPWWGCIAIGTVCVRTLLFPLVIASQRNAAKMNNYMPQLQV 174

Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS- 450
           L+ K  ++             + M+   K  N+NPL      L Q P+F + +  +    
Sbjct: 175 LQMKMTEARQAGNAIDSARYGQEMVLFMKEKNLNPLKNMLVPLAQAPIFISFFMGLREMA 234

Query: 451 ---LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504
              +E        W  DL   D                        PII SL++F     
Sbjct: 235 NTPVESMRDGGLFWFTDLTICDQFY-------------------ALPIITSLTLFATIEL 275

Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV----- 555
                +MS          IL  +P+       +FP  ++ YW+ SN  S+VQ        
Sbjct: 276 GTDSARMSAANMQ-TAKYILRALPLFIFPFTINFPGAILCYWACSNFFSLVQVGFLRIPK 334

Query: 556 ------IMKMHGAEIGLIDRLRSTF 574
                 I ++   +   +   +  F
Sbjct: 335 VRDFFKIDRIVTHKPETLPIKKKGF 359


>gi|319940011|ref|ZP_08014365.1| membrane protein oxaA 1 [Streptococcus anginosus 1_2_62CV]
 gi|319810725|gb|EFW07052.1| membrane protein oxaA 1 [Streptococcus anginosus 1_2_62CV]
          Length = 271

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 27/218 (12%)

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
             F +   F +  G+ GI I+L T+ ++ +  P+ + Q  ++  M+  QP + EL+ K+ 
Sbjct: 39  YFFAVTIRFLSFNGSTGIGIILFTLIIRTVLLPVFQLQINASRKMQEAQPLVKELQAKYP 98

Query: 405 QSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
               +    L +   +LYK   + P A  WP+L+Q+PV  A+Y  ++  +E      + W
Sbjct: 99  GRDMESRSRLAEETQKLYKELGVKPSASFWPLLIQMPVLIALYHALTR-VEFLKVGHFLW 157

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAM 518
           + +L A DP                     I P++ ++  F+   +S       +     
Sbjct: 158 L-NLGATDPYY-------------------ILPVLAAVFTFLSTWLSNKGMAERNGLMTG 197

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           ++  MP+   F   S  +G+ +YWS S    + Q  ++
Sbjct: 198 MMFVMPLFVFFFAMSVASGVALYWSTSYAYQVFQTLLL 235


>gi|227551947|ref|ZP_03981996.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus
           faecium TX1330]
 gi|257895460|ref|ZP_05675113.1| inner membrane protein [Enterococcus faecium Com12]
 gi|293378327|ref|ZP_06624496.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecium
           PC4.1]
 gi|227178852|gb|EEI59824.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus
           faecium TX1330]
 gi|257832025|gb|EEV58446.1| inner membrane protein [Enterococcus faecium Com12]
 gi|292643191|gb|EFF61332.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecium
           PC4.1]
          Length = 316

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395
                +     N   ++G A++  TV V+++  PL   Q   T                 
Sbjct: 45  PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453
             +L+    +      Q  M Q+Y+ + ++     GC P+L+Q+P+F A+Y     +  +
Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R + F+G   DL +                        +   I  ++  +Q  +S     
Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201

Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           + Q   +  M    P + VF   S PAG+ +YW    V S +Q  +   M   +  L  +
Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259

Query: 570 LRSTFSKNYNSQ 581
           +     +N   Q
Sbjct: 260 VAEELKQNPPKQ 271


>gi|325571080|ref|ZP_08146652.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus
           casseliflavus ATCC 12755]
 gi|325156165|gb|EGC68351.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus
           casseliflavus ATCC 12755]
          Length = 308

 Score =  107 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 99/259 (38%), Gaps = 39/259 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394
             + + +     M+     N   ++G AI+  T+ V+++  PL   Q   T         
Sbjct: 37  MIYRFLVKPLGDMITMLVENFNWSYGWAIIAVTIVVRVIILPLGIHQSRKTMIQSEKMQF 96

Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
                      L++   +      Q  M ++Y  +N++     GC P+L+Q+P+F A+Y 
Sbjct: 97  LKPQVDIAQANLKKATTREEQMQAQAEMQKIYSENNVSMFGGIGCLPLLIQMPIFSALYF 156

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  ++++ F+G    ++  DP+ +F     + +   G++     P           
Sbjct: 157 TARYTQGIQNSEFFG----VSLGDPSILFVAIAGISYLAQGYISTIGIP----------- 201

Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
                   + Q   +  M    P++ VF   S PAG+ +YW    V S +Q  +   +  
Sbjct: 202 --------EEQKKTMKTMLIVSPLMIVFMSMSAPAGVTLYWVVGGVFSCIQTFITNVIM- 252

Query: 562 AEIGLIDRLRSTFSKNYNS 580
            +  +  ++ +    N   
Sbjct: 253 -KPKIRAQVEAEMKANPPK 270


>gi|183602664|ref|ZP_02964028.1| conserved hypothetical transmembrane protein in the 60 kDa inner
           membrane protein family [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219684025|ref|YP_002470408.1| hypothetical protein BLA_1550 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|241191630|ref|YP_002969024.1| Preprotein translocase subunit [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241197035|ref|YP_002970590.1| Preprotein translocase subunit [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183218082|gb|EDT88729.1| conserved hypothetical transmembrane protein in the 60 kDa inner
           membrane protein family [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219621675|gb|ACL29832.1| membrane protein oxaA [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240250022|gb|ACS46962.1| Preprotein translocase subunit [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240251589|gb|ACS48528.1| Preprotein translocase subunit [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|289177766|gb|ADC85012.1| Inner membrane protein [Bifidobacterium animalis subsp. lactis
           BB-12]
 gi|295794622|gb|ADG34157.1| Preprotein translocase subunit [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 336

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 110/249 (44%), Gaps = 27/249 (10%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
                  ++   +  +    +  +       ++ +AI+   + V+   FPL  K      
Sbjct: 18  KILTPIEWLMTWVMWVFHKLFTFIGMPEHGISWALAIIFLVIVVQACVFPLYYKSMKGMR 77

Query: 388 NMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            M+ +QPK+ +++ K+K        + +Q+ M++LYK +N NP   C P+LLQ PVF  +
Sbjct: 78  AMQAMQPKMMKIQNKYKGKNDPASKEAMQREMMKLYKDNNANPAGSCLPMLLQGPVFMCM 137

Query: 444 YKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGILPFY------LPGFMHVGIWPII 496
           + V+S    + R         D+A A+  +  T FG+            G + +GI+  +
Sbjct: 138 FYVLSAIPYIARGKRSPLGAFDVATAESFSQSTYFGVKITDSFTTATTTGKVVIGIFVAL 197

Query: 497 MSL----SMFIQMKMSPPPA------DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546
           M        F  M+ +  PA         Q  +L   P++++F+  + P  ++IYW  +N
Sbjct: 198 MCACLWYMQFYSMRRNTAPASVNRQSQMMQKAMLWVFPIMYIFSGVAMPFAVLIYWLANN 257

Query: 547 VISIVQQAV 555
           + ++++   
Sbjct: 258 ICNLLRTMW 266


>gi|312623586|ref|YP_004025199.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312204053|gb|ADQ47380.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 341

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 34/254 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
            W  F+A P+  L+ + Y+ +       ++GIAI+L T+ V+ L  PL  KQ  ST+ M 
Sbjct: 4   TWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAIILLTLIVRGLLLPLYIKQIQSTSKMA 63

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            + P++ E+++K+K    + +Q+ M++LY+    NP  GCWP+L+QIP+ F++Y V    
Sbjct: 64  EVAPRLQEIQQKYKN-DQKKMQEEMLKLYQETGYNPAGGCWPLLIQIPILFSLYYVFQNP 122

Query: 451 LEMRHAPFWGWIKDLAAADPTN-----IFTLFGILPFYLPGFMH------VGIWPIIMSL 499
           L         ++KDL            I      L   +  F        + + PI+ ++
Sbjct: 123 LVYVLGKSHQYVKDLITGATGYNITQRIVNEAQKLGLDMHFFGINLAQKELIVLPILSAV 182

Query: 500 SMFI--------QMKMSP--------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
             F+        Q K +P          A+     ++ + P++  F     P+GL++YW+
Sbjct: 183 FSFLSILYSMNSQKKFNPQYSSSQTNAMAEGMNRSLMIFSPLMSYFIALQVPSGLVLYWT 242

Query: 544 WSNVISIVQQAVIM 557
            SN+  I+QQ +  
Sbjct: 243 VSNLFQILQQFIAN 256


>gi|222530703|ref|YP_002574585.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222457550|gb|ACM61812.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 341

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 34/254 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
            W  F+A P+  L+ + Y+ +       ++GIAI+L T+ V+ L  PL  KQ  ST+ M 
Sbjct: 4   TWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAIILLTLIVRGLLLPLYIKQIQSTSKMA 63

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            + P++ E+++K+K    + +Q+ M++LY+    NP  GCWP+L+QIP+ F++Y V    
Sbjct: 64  EVAPRLQEIQQKYKN-DQKKMQEEMLKLYQETGYNPAGGCWPLLIQIPILFSLYYVFQNP 122

Query: 451 LEMRHAPFWGWIKDLAAADPTN-----IFTLFGILPFYLPGFMH------VGIWPIIMSL 499
           L         ++KDL            I      L   +  F        + + PI+ ++
Sbjct: 123 LVYVLGKSHQYVKDLITGATGYNITQRIVNEAQKLGLDMHFFGINLAQKELIVLPILSAV 182

Query: 500 SMFI--------QMKMSP--------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
             F+        Q K +P          A+     ++ + P++  F     P+GL++YW+
Sbjct: 183 FSFLSILYSMNSQKKFNPQYSSSQTNAMAEGMNRSLMIFSPLMSYFIALQVPSGLVLYWT 242

Query: 544 WSNVISIVQQAVIM 557
            SN+  I+QQ +  
Sbjct: 243 VSNLFQILQQFIAN 256


>gi|293553834|ref|ZP_06674449.1| membrane protein OxaA 2 [Enterococcus faecium E1039]
 gi|294620202|ref|ZP_06699536.1| membrane protein OxaA 2 [Enterococcus faecium E1679]
 gi|314940176|ref|ZP_07847354.1| putative OxaA-like protein [Enterococcus faecium TX0133a04]
 gi|314942407|ref|ZP_07849250.1| putative OxaA-like protein [Enterococcus faecium TX0133C]
 gi|314952317|ref|ZP_07855328.1| putative OxaA-like protein [Enterococcus faecium TX0133A]
 gi|314994240|ref|ZP_07859543.1| putative OxaA-like protein [Enterococcus faecium TX0133B]
 gi|314997155|ref|ZP_07862141.1| putative OxaA-like protein [Enterococcus faecium TX0133a01]
 gi|291593555|gb|EFF25095.1| membrane protein OxaA 2 [Enterococcus faecium E1679]
 gi|291602040|gb|EFF32277.1| membrane protein OxaA 2 [Enterococcus faecium E1039]
 gi|313588729|gb|EFR67574.1| putative OxaA-like protein [Enterococcus faecium TX0133a01]
 gi|313591327|gb|EFR70172.1| putative OxaA-like protein [Enterococcus faecium TX0133B]
 gi|313595576|gb|EFR74421.1| putative OxaA-like protein [Enterococcus faecium TX0133A]
 gi|313598807|gb|EFR77652.1| putative OxaA-like protein [Enterococcus faecium TX0133C]
 gi|313640615|gb|EFS05195.1| putative OxaA-like protein [Enterococcus faecium TX0133a04]
          Length = 316

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395
                +     N   ++G A++  TV V+++  PL   Q   T                 
Sbjct: 45  PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453
             +L+    +      Q  M Q+Y+ + ++     GC P+L+Q+P+F A+Y     +  +
Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R + F+G   DL +                        +   I  ++  +Q  +S     
Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201

Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           + Q   +  M    P + VF   S PAG+ +YW    V S +Q  +   M   +  L  +
Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259

Query: 570 LRSTFSKNYNSQ 581
           +     +N   Q
Sbjct: 260 VAEELKQNPPKQ 271


>gi|256381073|ref|YP_003104733.1| 60 kDa inner membrane insertion protein [Actinosynnema mirum DSM
           43827]
 gi|255925376|gb|ACU40887.1| 60 kDa inner membrane insertion protein [Actinosynnema mirum DSM
           43827]
          Length = 358

 Score =  106 bits (265), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 101/262 (38%), Gaps = 39/262 (14%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++  ++ + G          + ++++     ++ L F     Q  S   
Sbjct: 1   MLNFIYYPVSFILWCWHWVFGRIFGESSGIAWALSVIFLVFTLRALLFKPFVGQVRSMRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+   P++ ++++K+     Q   + M +L   H +NPL GC P+L+QIPVF  ++ V+ 
Sbjct: 61  MQEFAPELQKIKKKYAN-DRQRQAQEMQKLQAEHGVNPLGGCLPMLVQIPVFIGLFHVLR 119

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFG---------------ILPFYLPGFMHVGI- 492
                    ++    D A  D      LFG               +        M V I 
Sbjct: 120 SFKPGWGEVYFF---DKAGVDSFVQAKLFGANLSTFITMPADQLELFSTSRTAVMAVAIP 176

Query: 493 WPIIMSLSMFIQ-----MKMSPPPADKGQAMIL-----NWMPVVFVFALSSFPAGLIIYW 542
             ++ +++          + +   A+  Q  I+        P+  +     FP  +++YW
Sbjct: 177 LAVVAAVATHFTGRHSVARQTQAAAENPQTAIMNKLVVYVFPLGALAGGFFFPVAILLYW 236

Query: 543 SWSNVISIVQQAVIMKMHGAEI 564
             +N  +++QQ V+      E 
Sbjct: 237 LSNNGWTLMQQRVVYGRIDREE 258


>gi|317133706|ref|YP_004093020.1| membrane protein insertase, YidC/Oxa1 family [Ethanoligenens
           harbinense YUAN-3]
 gi|315471685|gb|ADU28289.1| membrane protein insertase, YidC/Oxa1 family [Ethanoligenens
           harbinense YUAN-3]
          Length = 405

 Score =  106 bits (265), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 72/311 (23%), Positives = 127/311 (40%), Gaps = 66/311 (21%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
               F  I  P+  L+ + Y L  N+G+AI+L T+ +++L  PLA KQ  S A+   +QP
Sbjct: 6   FTNIFDIINIPLGFLLRFCYQLTNNYGLAIILLTLIIRILLVPLAVKQQKSMAHTVRLQP 65

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS---- 450
           K+  L++K   +  Q LQ+  ++LY+    NP+ GC P+L Q+P+ + +Y VI       
Sbjct: 66  KLQALQKKHANNK-QKLQEEQMKLYQEEGANPMGGCLPLLFQLPILYGLYNVIYHPLLYI 124

Query: 451 -----------------------------------------LEMRHAPFWGWIKDLAAAD 469
                                                    +E+  A       D  +  
Sbjct: 125 VQLSVDVKNRVVYDLFSILKTTYPSVFGKMSTPSQALSNGQVEIYAAKLMPNHMDKLSFL 184

Query: 470 PTNI----FTLFGILPFYLPGF-MHVGIW-PIIMSLSMFIQMKM------------SPPP 511
           P N+    F   G+    +PG+ + + +  PI   LS FIQ+ +            + P 
Sbjct: 185 PANVLKLDFNFLGLDLSVVPGWQISIYLLIPIFCYLSSFIQVWLSTRINKENNIAANAPG 244

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI--GLIDR 569
                  ++  MP++  +   S P+G+ +YW  SN+I + Q  ++ K +  +      DR
Sbjct: 245 TGGMNIGMMLIMPLMSAYISISVPSGVGLYWIASNLIMLAQILLLNKFYNPKELAEKYDR 304

Query: 570 LRSTFSKNYNS 580
                 +   +
Sbjct: 305 ESEHRKRERAA 315


>gi|77405816|ref|ZP_00782900.1| SpoIIIJ family protein [Streptococcus agalactiae H36B]
 gi|77412537|ref|ZP_00788832.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111]
 gi|77161405|gb|EAO72421.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111]
 gi|77175603|gb|EAO78388.1| SpoIIIJ family protein [Streptococcus agalactiae H36B]
          Length = 266

 Score =  106 bits (265), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 78/213 (36%), Gaps = 27/213 (12%)

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL-- 427
           L    + K       M   +P  + + E+ + +  Q      Q  ++   + + ++    
Sbjct: 34  LGLYQSWKASYQAEKMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGG 93

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487
            GC P+L+Q+P F AI+     +                   P      F  L       
Sbjct: 94  IGCLPLLIQMPFFSAIFFAARYT-------------------PGVSSATFLGLNLGQKSL 134

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
               I  I+  +  ++ M+  P    +    ++  MP++ VF   S PA + +YW    +
Sbjct: 135 TLTVIIAILYFVQSWLSMQGVPDEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGI 194

Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            SI+QQ V    +  +  L  ++   ++KN   
Sbjct: 195 FSIIQQLVTT--YVLKPKLRRKVEEEYTKNPPK 225


>gi|76799037|ref|ZP_00781232.1| Membrane protein oxaA 2 precursor [Streptococcus agalactiae 18RS21]
 gi|76585623|gb|EAO62186.1| Membrane protein oxaA 2 precursor [Streptococcus agalactiae 18RS21]
          Length = 266

 Score =  106 bits (265), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 78/213 (36%), Gaps = 27/213 (12%)

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL-- 427
           L    + K       M   +P  + + E+ + +  Q      Q  ++   + + ++    
Sbjct: 34  LGLYQSWKASYQAEKMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGG 93

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487
            GC P+L+Q+P F AI+     +                   P      F  L       
Sbjct: 94  IGCLPLLIQMPFFSAIFFAARYT-------------------PGVSSATFLGLNLGQKSL 134

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
               I  I+  +  ++ M+  P    +    ++  MP++ VF   S PA + +YW    +
Sbjct: 135 TLTVIIAILYFVQSWLSMQGVPDEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGI 194

Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            SI+QQ V    +  +  L  ++   ++KN   
Sbjct: 195 FSIIQQLVTT--YVLKPKLRRKVEEEYTKNPPK 225


>gi|257898075|ref|ZP_05677728.1| inner membrane protein [Enterococcus faecium Com15]
 gi|257835987|gb|EEV61061.1| inner membrane protein [Enterococcus faecium Com15]
          Length = 316

 Score =  106 bits (265), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395
                +     N   ++G A++  TV V+++  PL   Q   T                 
Sbjct: 45  PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453
             +L+    +      Q  M Q+Y+ + ++     GC P+L+Q+P+F A+Y     +  +
Sbjct: 105 QQKLKAATTREEQMSAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R + F+G   DL +                        +   I  ++  +Q  +S     
Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201

Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           + Q   +  M    P + VF   S PAG+ +YW    V S +Q  +   M   +  L  +
Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259

Query: 570 LRSTFSKNYNSQ 581
           +     +N   Q
Sbjct: 260 VAEELKQNPPKQ 271


>gi|312370989|gb|EFR19273.1| hypothetical protein AND_22764 [Anopheles darlingi]
          Length = 415

 Score =  106 bits (265), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 82/231 (35%), Gaps = 37/231 (16%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     +   M + +  +       I + TV V+ L FPL      + A M N  P++  
Sbjct: 108 WTPVGIVQNCMEFLHIGLDLPWWGCIAIGTVVVRTLLFPLVIASQKNAAKMNNHMPQMQV 167

Query: 399 LREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS- 450
           L+ K  ++             + ++   K   +NPL      L Q P+F + +  +    
Sbjct: 168 LQVKMTEARQAGNAIDAARYGQELMLFMKEKKLNPLKNMLVPLAQAPIFISFFMGLREMA 227

Query: 451 ---LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
              ++        W  DL   D                        PII S+++F+ +++
Sbjct: 228 NTPVDSMREGGLFWFTDLTVCDQFY-------------------ALPIITSMTLFLTIEL 268

Query: 508 ------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
                       +    IL  +P+       +FP  ++ YW+ SN  S++Q
Sbjct: 269 GTDSARMSAAGMQTAKYILRALPIFIFPFTINFPGAILCYWACSNFFSLLQ 319


>gi|324999878|ref|ZP_08120990.1| preprotein translocase subunit YidC [Pseudonocardia sp. P1]
          Length = 388

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 107/266 (40%), Gaps = 40/266 (15%)

Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  +M  ++ +            + ++++     ++L+ +     Q  S   
Sbjct: 1   MLDFIYYPVSFIMWVWHKVFGFVLGEDSGFAWALSVVFLVFTLRLILYKPFVTQVRSMRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ + P++ +LR+K+     Q L   M +L + +  NPL GC PIL+QIPVF  ++ V+ 
Sbjct: 61  MQEMAPEMQKLRKKYAN-DRQKLATEMQKLQQQNGANPLMGCLPILVQIPVFIGLFHVLR 119

Query: 449 ISLEMRHAPFWGWIK--------DL------AAADPT-NIFTLFGILPFYLPGFMHVGIW 493
                +   ++   +        DL      +A  P  N  ++  +   Y+  ++ +   
Sbjct: 120 EFKPGKTENYFFNAQENASFVDSDLFGSKLGSAIFPLQNTASVTDLGGNYVAQWVVMVPL 179

Query: 494 PIIMSLSMFIQMKMS---------------PPPADKGQAMILNWMPVVFVFALSSFPAGL 538
            I   +   I  + S                P A+  Q ++L   P+  V      P  +
Sbjct: 180 MIAAGIFTHITARHSVARQQAQIAAGTAAANPQAEIMQKLMLYVFPIGVVVGAPFLPLAV 239

Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEI 564
           + YW  +N+ ++ QQ  + K   AE 
Sbjct: 240 LFYWVSNNLWTLWQQHHVYKRIDAEE 265


>gi|257883078|ref|ZP_05662731.1| inner membrane protein [Enterococcus faecium 1,231,502]
 gi|257818736|gb|EEV46064.1| inner membrane protein [Enterococcus faecium 1,231,502]
          Length = 316

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395
                +     N   ++G A++  TV V+++  PL   Q   T                 
Sbjct: 45  PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453
             +L+    +      Q  M Q+Y+ + ++     GC P+L+Q+P+F A+Y     +  +
Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R + F+G   DL +                        +   I  ++  +Q  +S     
Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201

Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           + Q   +  M    P + VF   S PAG+ +YW    V S +Q  +   +   +  L  +
Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVIM--KPRLKAQ 259

Query: 570 LRSTFSKNYNSQ 581
           +     +N   Q
Sbjct: 260 VAEELKQNPPKQ 271


>gi|320458433|dbj|BAJ69054.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 287

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 91/212 (42%), Gaps = 22/212 (10%)

Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYK 420
           M   + +++   PL   Q  +T  M+ +QP+I  ++ K+         + +Q+ ++ L +
Sbjct: 1   MCLVLIIRICLLPLFFSQMRATQRMQVLQPQIQRIQRKYAARKDPRSKEAMQREIMALQQ 60

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRHAPFWGWIKDLAAAD--PTNIFTL 476
            HN NPL  C   L+Q P+  +++  +    +    +A     I  + A D   ++IF +
Sbjct: 61  RHNANPLGSCLLSLIQAPILCSLFYTLQSLPASAAGNAEPLSGIDRVMAGDIESSSIFGV 120

Query: 477 FGILPF----YLPGFMHVGIWPIIMSLSMFIQMKM-----SPP-PADKGQ---AMILNW- 522
                F         + +G+   +M L +F    +     +P    D  Q     +  + 
Sbjct: 121 RIADSFGTVVSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQFRTQKLTAFV 180

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
            P ++V +  + P G+++YW  +N+ +  Q  
Sbjct: 181 FPAIYVVSGGTLPFGVLLYWLTNNLWNFGQTL 212


>gi|292559000|gb|ADE32001.1| putative inner membrane protein [Streptococcus suis GZ1]
          Length = 304

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 39/259 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF----PLAKKQYVSTANMKN 391
           W + + +A    ++  +  N    FG+AI++ T+ V+L         + K    +  M  
Sbjct: 36  WVYNFLVAPMGNLIKFFAENQGLGFGVAIIIVTLIVRLFIMPLGIYQSWKSTYQSEKMNY 95

Query: 392 IQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           ++P +  ++E+ K +  Q  Q    +      K + ++     GC PIL+Q+P F A++ 
Sbjct: 96  LKPILGPIQERMKNASSQEEQLAAQQEYFAAQKQYGVSVFGGMGCLPILIQMPFFTALFY 155

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  A F G   DL +                        I   I  +  + Q 
Sbjct: 156 AARYTEGISEATFLG--IDLGS---------------------ASLILTAIAGILYYAQS 192

Query: 506 KMSPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            +     D+ Q   +     M P++ V    S PAG+ +YW     I +VQQA+      
Sbjct: 193 LLMQVGMDEEQKKQMKAVAIMNPLMIVMFSWSSPAGVTLYWVVGGFIGLVQQALTN--FI 250

Query: 562 AEIGLIDRLRSTFSKNYNS 580
            +  +  ++   F  N   
Sbjct: 251 LKPRIRAKVEEEFKNNPPK 269


>gi|332358080|gb|EGJ35912.1| stage III sporulation protein J [Streptococcus sanguinis SK49]
          Length = 271

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 27/211 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409
            F +  G+ GI I+L T+ ++ +  P+ + Q  S+  ++ +QP I +L+EK+     +  
Sbjct: 46  RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESR 105

Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L +   +LYK   +NP A   P+ +Q+PV  A+++ ++  ++      + W+ +L A 
Sbjct: 106 TALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525
           DPT                    I P++ +L  F    +S       + G  +++  MPV
Sbjct: 164 DPTF-------------------ILPLLAALFTFFSTWLSNKALPERNGGMTVMMYLMPV 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           V  F      +G+ +YW+ SN   +VQ  ++
Sbjct: 205 VIFFFALYAASGVALYWAVSNAYQVVQTLLL 235


>gi|149598665|ref|XP_001516970.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 411

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 88/235 (37%), Gaps = 36/235 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ Y + ++   +  AI+  TV  + L FPL  K       + N  P+I 
Sbjct: 100 SYTPVGMVQNLLEYIHIDMGLPWWGAIVTCTVAARCLIFPLIVKGQREAVKINNHMPEIQ 159

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +L  +  ++     +    +         K H+++PL G    L Q P+F + +  +   
Sbjct: 160 KLSARMNEAKMSGDKFEFSRAYSDLQLYQKKHDVSPLRGFIVPLAQAPIFISFFIALREM 219

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +      +    W  DL  ADP                       P++++ SM+  ++
Sbjct: 220 AYLPVPSMQSGGLLWFPDLTVADPFY-------------------ALPLLVTASMWAVLE 260

Query: 507 MSPPPA-DKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +      +     ++      MP+V +     FP  +  YW  SN+ S+ Q A +
Sbjct: 261 LGAETGVNNANLRVMKTVIRVMPLVVLPFTIHFPTAVFTYWLSSNLFSLAQVAFL 315


>gi|306826338|ref|ZP_07459671.1| ParB/SpoJ family partitioning protein [Streptococcus sp. oral taxon
           071 str. 73H25AP]
 gi|304431451|gb|EFM34434.1| ParB/SpoJ family partitioning protein [Streptococcus sp. oral taxon
           071 str. 73H25AP]
          Length = 277

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 104/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  D   F+      F  +  F +   + G+ I+L T+ ++ +  P+ + Q V++  M+
Sbjct: 31  DITADSTDFWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQMVASRKMQ 90

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L + M ++YK   I   +  WPIL+Q+PV  A+++ +
Sbjct: 91  EAQPRIKALREQYPGRDMESRTKLDQEMRKVYKELGIKHSSSLWPILIQMPVLLALFQAL 150

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L   D +                    + PI+ ++  F+   +
Sbjct: 151 SR-VDFLKTGHFLWI-NLGGVDTSF-------------------VLPILAAVFTFLSSWL 189

Query: 508 SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S     +       ++  MP++      S P+G+ +YW+ SN   ++Q   + 
Sbjct: 190 SNKALSEKSGATTGMMYGMPILIFVFAISAPSGVALYWAVSNAYQVLQTYFLN 242


>gi|298345820|ref|YP_003718507.1| hypothetical protein HMPREF0573_10694 [Mobiluncus curtisii ATCC
           43063]
 gi|304390476|ref|ZP_07372429.1| preprotein translocase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|298235881|gb|ADI67013.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
 gi|304326232|gb|EFL93477.1| preprotein translocase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 441

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 28/256 (10%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
            GW       M  L+         + +AI+  T+ V+L+  PL  KQ  ++  M   QP+
Sbjct: 28  VGWVLRGVHEMITLLGVESGAGIGWVLAIVGMTIVVRLIIVPLFIKQIKASRAMSLAQPE 87

Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +  + +K+K    Q      Q+ M  + K +  +  A C P+L+Q+PV  A+Y+++    
Sbjct: 88  LTAITKKYKGKRDQQTMMRQQEEMKAVQKKYGASMSASCLPLLVQMPVLLALYRLLYYMS 147

Query: 452 EMRHAPF--------WGWIKDLAAADPTNIFTLFGILPFYLPGF----MHVGIWPIIMSL 499
            + H            G  +  A  D T      G   F         + +GI    + +
Sbjct: 148 AVAHGTMPEHVSIGGMGQQQAKALWDSTFFGESLGQTMFGPTSTLQTKIVIGIMVAFLVI 207

Query: 500 SMFIQMK-MSPPPADKGQ-----------AMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
           +MF+Q   +S       Q             ++ +MP+V++F       GL+IYW+ SN 
Sbjct: 208 TMFVQTAFLSMKNMSDEQLNSDNPMVKSTKSMMYFMPLVYLFTGPVVQVGLLIYWATSNT 267

Query: 548 ISIVQQAVIMKMHGAE 563
            S+VQQ  +++ +   
Sbjct: 268 WSLVQQYFMIRAYPTR 283


>gi|22122905|gb|AAM92288.1| putative cytochrome oxidase assembly protein [Oryza sativa Japonica
           Group]
 gi|78708924|gb|ABB47899.1| Inner membrane protein OXA1-like, mitochondrial precursor,
           putative, expressed [Oryza sativa Japonica Group]
          Length = 413

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 96/242 (39%), Gaps = 34/242 (14%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           E+       +F    +  ++ Y +   G N+   I L TV ++    PL   Q  +T  +
Sbjct: 113 EVAAAAADSFFPVAALQHVIDYIHTFTGLNWWACIALATVLIRSATVPLLVNQLKATQKL 172

Query: 390 KNIQPKIDELREKF--KQSPPQVLQKAMI-QLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
             I+P+++ ++E+            KA +  L++ H ++P      +L+Q P+F + +  
Sbjct: 173 NAIRPEMEAIKEEMNAMDPKSAKEGKAKMTALFQKHGVSPFTPLKGLLIQGPIFMSFFFA 232

Query: 447 ISISLE----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           I   ++    M+      W  DL   DP                     I P++ +L   
Sbjct: 233 IRNMIDKVPSMKGGGS-LWFTDLTTPDPLY-------------------ILPVLTALIFL 272

Query: 503 IQMKMS---PPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           + ++++       +     + N+   M V+ V    SF  G+  YW  SN+ ++    VI
Sbjct: 273 VTVELNLQEGMEGNPMARKMKNFSRGMAVLTVPFTMSFAKGIFCYWITSNLFTLTYGFVI 332

Query: 557 MK 558
            +
Sbjct: 333 RR 334


>gi|315657685|ref|ZP_07910567.1| preprotein translocase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492157|gb|EFU81766.1| preprotein translocase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 441

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 28/256 (10%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
            GW       M  L+         + +AI+  T+ V+L+  PL  KQ  ++  M   QP+
Sbjct: 28  VGWVLRGVHEMITLLGVESGAGIGWVLAIVGMTIVVRLIIVPLFIKQIKASRAMSLAQPE 87

Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +  + +K+K    Q      Q+ M  + K +  +  A C P+L+Q+PV  A+Y+++    
Sbjct: 88  LTAITKKYKGKRDQQTMMRQQEEMKAVQKKYGASMSASCLPLLVQMPVLLALYRLLYYMS 147

Query: 452 EMRHAPF--------WGWIKDLAAADPTNIFTLFGILPFYLPGF----MHVGIWPIIMSL 499
            + H            G  +  A  D T      G   F         + +GI    + +
Sbjct: 148 AVAHGTMPEHVSIGGMGQQQAKALWDSTFFGESLGQTMFGPTSTLQTKIVIGIMVAFLVI 207

Query: 500 SMFIQMK-MSPPPADKGQ-----------AMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
           +MF+Q   +S       Q             ++ +MP+V++F       GL+IYW+ SN 
Sbjct: 208 TMFVQTAFLSMKNMSDEQLNSDNPMVKSTKSMMYFMPLVYLFTGPVVQVGLLIYWATSNT 267

Query: 548 ISIVQQAVIMKMHGAE 563
            S+VQQ  +++ +   
Sbjct: 268 WSLVQQYFMIRAYPTR 283


>gi|270290419|ref|ZP_06196644.1| preprotein translocase YidC subunit [Pediococcus acidilactici 7_4]
 gi|270281200|gb|EFA27033.1| preprotein translocase YidC subunit [Pediococcus acidilactici 7_4]
          Length = 322

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 32/255 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK----N 391
           + +          +    + + G++G+AI+L T  V+L+  PL   Q       +     
Sbjct: 35  FIYDNLAVPMQHFMDYLSHLVGGSYGLAIILITFVVRLILLPLMVNQSRKATVQQEKMSY 94

Query: 392 IQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           IQP++  L+E+ +          + + M+ LY+ +NI+     GC P+L+Q PVF A+Y 
Sbjct: 95  IQPQLKVLQERNQTAKTPEEKAAVSQEMMALYRDNNISMTGGIGCLPLLIQFPVFAALYA 154

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
            I  S E+ H   +  I    ++   +I +    L     G + V               
Sbjct: 155 AIQYSPEL-HQGIFLGIDLSKSSLLLSIISFLVYLLQGWLGTLGV--------------- 198

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
              P    K    ++   P++ +F   S PAGL +Y++   V + +Q  +I         
Sbjct: 199 ---PEEQRKTMRSMMVISPLMILFFTFSTPAGLGLYFAVGGVFACIQTLLIN---FYRPR 252

Query: 566 LIDRLRSTFSKNYNS 580
           +  ++     KN   
Sbjct: 253 IRAQIHEEMKKNPPK 267


>gi|306791526|ref|ZP_07429828.1| membrane protein insertase, YidC/Oxa1 family [Mycobacterium
           tuberculosis SUMu005]
 gi|308339875|gb|EFP28726.1| membrane protein insertase, YidC/Oxa1 family [Mycobacterium
           tuberculosis SUMu005]
          Length = 394

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 100/265 (37%), Gaps = 39/265 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            + +     +               +    + +++M     ++ L +    +Q  +T  M
Sbjct: 10  LDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 69

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP+I  L++K+     Q +   M +L + H  NP+ GC P+L QIPVF  +Y V+  
Sbjct: 70  QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 128

Query: 450 ---SLEMRHAPFWGWIKD-------LAAADPTNIF--TLFGI---------------LPF 482
              +      P    I++        +  D  +     LFG                + F
Sbjct: 129 FNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGLDAFVDF 188

Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVVFVFAL 531
             P  + VG+   I+  ++ +   + S         A+   AM+    L   P+  V   
Sbjct: 189 SRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFPLGVVVGG 248

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556
              P  +I+YW  +N+ +  QQ  +
Sbjct: 249 PFLPLAIILYWFSNNIWTFGQQHYV 273


>gi|291004516|ref|ZP_06562489.1| putative inner membrane protein translocase component YidC
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 350

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 56/277 (20%), Positives = 106/277 (38%), Gaps = 39/277 (14%)

Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            F FI  P+  ++ +++ +            + +++      ++++    A  Q  +   
Sbjct: 1   MFDFILYPVSAILWFWHKIFGFVLGPDNGFAWALSVFFLVFSLRVVLLKPAISQMRAGRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+   P+I +LREK K    Q + + M +L   H +NPL GC P LLQIPVF +++ V+ 
Sbjct: 61  MQKFAPQIQKLREKHKN-DRQRMAQEMQKLQSEHGVNPLGGCLPALLQIPVFLSLFTVLR 119

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFG---------------ILPFYLPGFMHVGI- 492
              + +      +I D           +FG               +        + VG+ 
Sbjct: 120 ---DFKPGAPSNYIFDADGVRSFVEADIFGAKLSNWIVQSDQELALFGTTRTDMIMVGVP 176

Query: 493 WPIIMSLSMFIQMKMSP------PPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYW 542
             II S++ F  M++S         A+   AM+    +   PV  + +    P  +++YW
Sbjct: 177 LMIIASVATFFSMRISMKRQTEAAMANPQTAMMGKLMMYIAPVGAIVSGPFLPIAVLLYW 236

Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
             +N  ++ Q   +      E            K   
Sbjct: 237 MANNFWTLGQAHFLTNKIDREEQKAKEAEIAAKKEAP 273


>gi|25010517|ref|NP_734912.1| hypothetical protein gbs0444 [Streptococcus agalactiae NEM316]
 gi|77414752|ref|ZP_00790879.1| SpoIIIJ family protein [Streptococcus agalactiae 515]
 gi|38503014|sp|Q8E6W4|OXAA1_STRA3 RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|23094870|emb|CAD46088.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77159202|gb|EAO70386.1| SpoIIIJ family protein [Streptococcus agalactiae 515]
 gi|319744392|gb|EFV96751.1| ParB/SpoJ family partitioning protein [Streptococcus agalactiae
           ATCC 13813]
          Length = 271

 Score =  106 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 98/212 (46%), Gaps = 27/212 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409
            + +   + G+ I+L T+ ++ +  PL   Q  S+  M+ IQP++ EL++K+    P   
Sbjct: 46  QWLSFNHSIGLGIILFTLIIRAIMMPLYNMQMKSSQKMQEIQPRLKELQKKYPGKDPDSR 105

Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L   M  +YK   +NP A   P+L+Q+PV +A+++ ++    ++   F     +L+  
Sbjct: 106 LKLNDEMQSMYKAEGVNPYASVLPLLIQLPVLWALFQALTRVSFLKVGTFLS--LELSQP 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ---AMILNWMPV 525
           DP                     I P++ +L  F+   ++   A +      ++   MP 
Sbjct: 164 DPYY-------------------ILPVLAALFTFLSTWLTNKAAVEKNIALTLMTYVMPF 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           + +    +F +G+++YW+ SN   + Q  ++ 
Sbjct: 205 IILVTSFNFASGVVLYWTVSNAFQVFQILLLN 236


>gi|270293445|ref|ZP_06199653.1| SpoJ protein [Streptococcus sp. M143]
 gi|270278107|gb|EFA23956.1| SpoJ protein [Streptococcus sp. M143]
          Length = 270

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  D    +      F  +  F +   + G+ I+L T+ ++ +  P+ + Q V++  M+
Sbjct: 25  DVAADSTDIWSKFVYFFAEIIRFLSFDVSIGVGIILFTILIRTILLPVFQTQMVASRKMQ 84

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  L+E++     +    L + M ++YK   +   +  WPIL+Q+PV  A+++ +
Sbjct: 85  EAQPRIKALQEQYPGRDMESRTKLDQEMRKVYKELGVKHSSSLWPILIQMPVLLALFQAL 144

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +  ++      + W+ +L   D +                    I PI+ ++  F+   +
Sbjct: 145 TR-VDFLKTGHFLWV-NLGGVDTSF-------------------ILPILAAVFTFLSSWL 183

Query: 508 SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S     +       ++  MPV+      S P+G+ +YW+ SN   ++Q   + 
Sbjct: 184 SNKALPERSGAMTGMMYGMPVLIFIFAISSPSGVALYWAVSNAYQVLQTYFLN 236


>gi|54027644|ref|YP_121886.1| putative inner membrane protein translocase component YidC
           [Nocardia farcinica IFM 10152]
 gi|54019152|dbj|BAD60522.1| putative membrane protein [Nocardia farcinica IFM 10152]
          Length = 359

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 56/296 (18%), Positives = 111/296 (37%), Gaps = 53/296 (17%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++ +++ + G          + +A++     ++++ +    KQ  +T  
Sbjct: 1   MLDFIYWPVSWILWFWHRVFGFAFGADNGLTWALAVVFLVFTLRIVLYKPFVKQVRTTKQ 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QP+I EL++K+K    Q +   M +L K H  NPL GC P+L Q+PVF  ++ V+ 
Sbjct: 61  MQELQPQIKELQKKYKN-DRQKMALEMQKLQKEHGFNPLMGCLPVLAQVPVFLGLFHVLR 119

Query: 449 ISLEMRH---------------APFWGWIKDLAAADPTNIFTL----------------- 476
                 H               A +     D+ +     IF                   
Sbjct: 120 SFNRTGHGFGQLGLTPEQNANTANYVFNAADVQSFLSARIFGAPISAFITTPQAEFLAFE 179

Query: 477 -FGILPFYLPGFMHVGIWPIIMSLSMFIQ-----MKMSPPPADKGQAMILN-----WMPV 525
            +G +P  L   +      +I  L+          + +P  A   QA ++N       P+
Sbjct: 180 DYGGIPSRLSIALVAIPLMVIAGLATHFNARASVARQTPEAAANPQAALMNKLALWVFPL 239

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +      P  +++YW  +N+ +  QQ ++      E     + +         +
Sbjct: 240 GVLVGGPFLPIAILLYWVSNNIWTYGQQHLVFGRMAKEEEAKKQAKLEQRAQNAPK 295


>gi|256751458|ref|ZP_05492336.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256749677|gb|EEU62703.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 206

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 23/220 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              IA  +  L+ + ++ VGN+GIAI++ T+ +++L  P   +Q  +   MK IQP + E
Sbjct: 1   MTTIAVYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMNTMKKMKEIQPLVQE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L++K+ +  PQ L    ++LY+   +NP  GC P+LL + + + ++ ++        A  
Sbjct: 61  LQKKYVK-DPQKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTAS- 118

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + WI  LA  DP                     I PI+ +++ +I   M     DK Q  
Sbjct: 119 FLWIHSLAQKDPYY-------------------IIPILAAVTTYISSAM--VATDKSQNS 157

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +   M +   +   S PAG+ IYW  SN+  IVQQ + M+
Sbjct: 158 MNIMMSIFMGWITVSLPAGVGIYWVTSNIFQIVQQYIFMR 197


>gi|116333652|ref|YP_795179.1| preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367]
 gi|116098999|gb|ABJ64148.1| Preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367]
          Length = 300

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 99/263 (37%), Gaps = 40/263 (15%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
                + + Y       ++    +   G++G AI++ TV V+++  P+  +Q  S    +
Sbjct: 29  GKPYGFVYDYLAVPGQHVMDWLAHIFGGSYGWAIIILTVIVRMVLLPIMVRQMRSATVQQ 88

Query: 391 --------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
                    +     + +        Q   +AM+ LY+ + I+     GC P+L+Q+P+F
Sbjct: 89  EKISMIRPQMTALQKQQKAAKTPEEQQAASQAMMALYRNNGISMTGGIGCLPLLIQMPIF 148

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            A+Y  I  S E+ +                   T+F  +P     +    I  ++  LS
Sbjct: 149 AALYAAIRYSPELSN-------------------TVFLGIPLGKSSW----ILALLSFLS 185

Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             +Q  +S     + Q   +       PV+ +F   S PAGL +Y+    + + +Q  +I
Sbjct: 186 YLLQGYLSMLGMPEDQKKQMRMTLLLSPVMILFFTMSSPAGLGLYFFVGGLFACLQTLII 245

Query: 557 MKMHGAEIGLIDRLRSTFSKNYN 579
                    +   ++        
Sbjct: 246 N---FYRPRIRREIKEKMKDQPA 265


>gi|188587521|ref|YP_001919066.1| 60 kDa inner membrane insertion protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179352208|gb|ACB86478.1| 60 kDa inner membrane insertion protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 213

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 66/233 (28%), Positives = 119/233 (51%), Gaps = 26/233 (11%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
               I   +  ++S+FY L G++G+AI++ T+ V+ L FPL  KQ  ST  M+ +QP++ 
Sbjct: 1   MLDPIISVLGSILSFFYELTGSYGLAIVILTIGVRALTFPLMAKQMQSTNKMQELQPELK 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA- 456
           +L+EK+K      L K  ++L+K H +NP AGC P+++Q+PV  A+++++    +     
Sbjct: 61  KLQEKYKDDKET-LNKKTMELWKKHKVNPAAGCLPLIVQMPVLIAMFRLLRDYQQFLGDV 119

Query: 457 -PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
            P +  I DL+ +DP                     I PI+   + F+Q K++       
Sbjct: 120 DPVFLGI-DLSQSDPFF-------------------ILPILAGGTTFLQQKLTMTSQSNS 159

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
             M++     + +F  S+ PAGL +Y+   N+ S++   ++MK +  E     
Sbjct: 160 SMMMIMP--FMIIFISSTLPAGLPLYFVVGNIFSLI-AHLVMKKNKPETQKEG 209


>gi|167038671|ref|YP_001666249.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167041021|ref|YP_001664006.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter sp.
           X514]
 gi|300913768|ref|ZP_07131085.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter
           sp. X561]
 gi|307725546|ref|YP_003905297.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter
           sp. X513]
 gi|320117063|ref|YP_004187222.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
 gi|166855261|gb|ABY93670.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter sp.
           X514]
 gi|166857505|gb|ABY95913.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|300890453|gb|EFK85598.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter
           sp. X561]
 gi|307582607|gb|ADN56006.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter
           sp. X513]
 gi|319930154|gb|ADV80839.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
          Length = 206

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 23/220 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              IA  +  L+ + ++ VGN+GIAI++ T+ +++L  P   +Q  +   MK IQP + E
Sbjct: 1   MTTIAVYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMNTMKKMKEIQPLVQE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L++K+ +  PQ L    ++LY+   +NP  GC P+LL + + + ++ ++        A  
Sbjct: 61  LQKKYAK-DPQKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTAS- 118

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + WI  LA  DP                     I PI+ +++ +I   M     DK Q  
Sbjct: 119 FLWIHSLAQKDPYY-------------------IIPILAAVTTYISSAM--VATDKSQNS 157

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +   M +   +   S PAG+ IYW  SN+  IVQQ + M+
Sbjct: 158 MNIMMSIFMGWITVSLPAGVGIYWVTSNIFQIVQQYIFMR 197


>gi|325686634|gb|EGD28660.1| stage III sporulation protein J [Streptococcus sanguinis SK72]
          Length = 271

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 27/211 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409
            F +  G+ GI I+L T+ ++ +  P+ + Q  S+  ++ +QP I +L+EK+     +  
Sbjct: 46  RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESR 105

Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L +   +LYK   INP A   P+ +Q+PV  A+++ ++  ++      + W+ +L A 
Sbjct: 106 TALAEETQKLYKEKGINPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525
           DPT                    I P++ +L  F    +S       + G  +++  MPV
Sbjct: 164 DPTF-------------------ILPLLAALFTFFSTWLSNKALPERNGGMTVMMYLMPV 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           V  F      +G+ +YW+ SN   +VQ  ++
Sbjct: 205 VIFFFALYAASGVALYWAVSNAYQVVQTLLL 235


>gi|304384699|ref|ZP_07367045.1| membrane protein [Pediococcus acidilactici DSM 20284]
 gi|304328893|gb|EFL96113.1| membrane protein [Pediococcus acidilactici DSM 20284]
          Length = 322

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 32/255 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK----N 391
           + +          +    + + G++G+AI+L T  V+L+  PL   Q       +     
Sbjct: 35  FIYDNLAVPMQHFMDYLSHLVGGSYGLAIILITFVVRLILLPLMVNQSRKATVQQEKMSY 94

Query: 392 IQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           IQP++  L+E+ +          + + M+ LY+ +NI+     GC P+L+Q PVF A+Y 
Sbjct: 95  IQPQLKVLQERNQTAKTPEEKAAVSQEMMALYRDNNISMTGGIGCLPLLIQFPVFAALYA 154

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
            I  S E+ H   +  I    ++   +I +    L     G + V               
Sbjct: 155 AIQYSPEL-HQGIFLGIDLSKSSLLLSIISFLVYLLQGWLGTLGV--------------- 198

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
              P    K    ++   P++ +F   S PAGL +Y++   V + +Q  +I         
Sbjct: 199 ---PEEQRKTMRSMMVISPLMILFFTFSTPAGLGLYFAVGGVFACIQTLLIN---FYRPR 252

Query: 566 LIDRLRSTFSKNYNS 580
           +  ++     KN   
Sbjct: 253 IRAQIHEEMKKNPPK 267


>gi|22536592|ref|NP_687443.1| SpoIIIJ family protein [Streptococcus agalactiae 2603V/R]
 gi|76799479|ref|ZP_00781620.1| Membrane protein oxaA 1 precursor [Streptococcus agalactiae 18RS21]
 gi|77412336|ref|ZP_00788649.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111]
 gi|38502994|sp|Q8CX16|OXAA1_STRA5 RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|22533428|gb|AAM99315.1|AE014210_5 SpoIIIJ family protein [Streptococcus agalactiae 2603V/R]
 gi|76585169|gb|EAO61786.1| Membrane protein oxaA 1 precursor [Streptococcus agalactiae 18RS21]
 gi|77161625|gb|EAO72623.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111]
          Length = 271

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 98/212 (46%), Gaps = 27/212 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409
            + +   + G+ I+L T+ ++ +  PL   Q  S+  M+ IQP++ EL++K+    P   
Sbjct: 46  QWLSFNHSIGLGIILFTLIIRAIMMPLYNMQMKSSQKMQEIQPRLKELQKKYPGKDPDNR 105

Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L   M  +YK   +NP A   P+L+Q+PV +A+++ ++    ++   F     +L+  
Sbjct: 106 LKLNDEMQSMYKAEGVNPYASVLPLLIQLPVLWALFQALTRVSFLKVGTFLS--LELSQP 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ---AMILNWMPV 525
           DP                     I P++ +L  F+   ++   A +      ++   MP 
Sbjct: 164 DPYY-------------------ILPVLAALFTFLSTWLTNKAAVEKNIALTLMTYVMPF 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           + +    +F +G+++YW+ SN   + Q  ++ 
Sbjct: 205 IILVTSFNFASGVVLYWTVSNAFQVFQILLLN 236


>gi|320547570|ref|ZP_08041855.1| ParB/SpoJ family partitioning protein [Streptococcus equinus ATCC
           9812]
 gi|320447645|gb|EFW88403.1| ParB/SpoJ family partitioning protein [Streptococcus equinus ATCC
           9812]
          Length = 271

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 102/233 (43%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E+       +      F     + ++ G  G+ I+L T+ ++ +  PL   Q  S+  M+
Sbjct: 25  EVTASSTNGWEQIVYFFAKAIQWLSINGRIGVGIILFTIIIRAILMPLFNMQIKSSQKMQ 84

Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           ++QP++ +L+EK+          L +    LYK + +NP A   P+++Q+P+  A+Y+ +
Sbjct: 85  DLQPELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVIQLPILMALYQAL 144

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +    ++    + WI+ L+  DP                     I P++ +   F+   +
Sbjct: 145 TRVAFLK-TGTFLWIE-LSQPDPYY-------------------ILPVLAAFFTFLSTWL 183

Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S   A   +    M+   MP++  F      +G+++YWS S    + Q  V+ 
Sbjct: 184 SNKAAREKNMAMTMMTYVMPIMIFFLAFRLASGVVLYWSVSYAFQVFQVLVLN 236


>gi|261209462|ref|ZP_05923825.1| inner membrane protein [Enterococcus faecium TC 6]
 gi|289566873|ref|ZP_06447281.1| OxaA-like protein precursor [Enterococcus faecium D344SRF]
 gi|260076590|gb|EEW64354.1| inner membrane protein [Enterococcus faecium TC 6]
 gi|289161322|gb|EFD09214.1| OxaA-like protein precursor [Enterococcus faecium D344SRF]
          Length = 316

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 91/252 (36%), Gaps = 39/252 (15%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395
                +     N   ++G A++  TV V+++  PL   Q   T                 
Sbjct: 45  PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQVLKPQVEAA 104

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453
             +L+    +      Q  M Q+Y+ + ++     GC P+L+Q+P+F A+Y     +  +
Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           R + F+G   DL +                        +   I   +  +Q  +S     
Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGGAYLLQGYISTIGIP 201

Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           + Q   +  M    P + VF   S PAG+ +YW    V S +Q  +   +   +  L  +
Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVIM--KPRLKAQ 259

Query: 570 LRSTFSKNYNSQ 581
           +     +N   Q
Sbjct: 260 VAEELKQNPPKQ 271


>gi|125575428|gb|EAZ16712.1| hypothetical protein OsJ_32188 [Oryza sativa Japonica Group]
          Length = 413

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 96/242 (39%), Gaps = 34/242 (14%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           E+       +F    +  ++ Y +   G N+   I L TV ++    PL   Q  +T  +
Sbjct: 113 EVAAAAADSFFPVAALQHVIDYIHTFTGLNWWACIALATVLIRSATVPLLVNQLKATQKL 172

Query: 390 KNIQPKIDELREKF--KQSPPQVLQKAMI-QLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
             I+P+++ ++E+            KA +  L++ H ++P      +L+Q P+F + +  
Sbjct: 173 NAIRPEMEAIKEEMNAMDPKSAKEGKAKMTALFQKHGVSPFTPLKGLLIQGPIFMSFFFA 232

Query: 447 ISISLE----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           I   ++    M+      W  DL   DP                     I P++ +L   
Sbjct: 233 IRNMIDKVPSMKGGGS-LWFTDLTTPDPLY-------------------ILPVLTALIFL 272

Query: 503 IQMKMS---PPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           + ++++       +     + N+   M V+ V    SF  G+  YW  SN+ ++    VI
Sbjct: 273 VTVELNLQEGMEGNPMARKMKNFSRGMAVLTVPFTMSFAKGIFCYWITSNLFTLTYGFVI 332

Query: 557 MK 558
            +
Sbjct: 333 RR 334


>gi|312876167|ref|ZP_07736154.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796982|gb|EFR13324.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 341

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 34/254 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
            W  F+A P+  L+ + Y+ +       ++GIA++L T+ V+ L  PL  KQ  ST+ M 
Sbjct: 4   TWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSKMA 63

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            + P++ E+++K+K    ++ Q+ M++LY+    NP  GCWP+L+Q+P+ F++Y V    
Sbjct: 64  EVAPRLQEIQQKYKNDQRKM-QEEMLKLYQETGYNPAGGCWPLLIQLPILFSLYYVFQNP 122

Query: 451 LEMRHAPFWGWIKDLAAA-----------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           L         ++KDL              D      L             + + PI+ + 
Sbjct: 123 LVYVLGKSHQYVKDLITGATGYNITQRIVDEAQKLGLDMHFFGINLAQKELIVLPILSAA 182

Query: 500 SMFI--------QMKMSPPPADKGQAMI--------LNWMPVVFVFALSSFPAGLIIYWS 543
             F+        Q K +P  +      +        + + P++  F     P+GL++YW+
Sbjct: 183 FSFLSILYSMNSQKKFNPQYSQSQSNAMAESINRSLMIFSPLMSYFIALQVPSGLVLYWT 242

Query: 544 WSNVISIVQQAVIM 557
            +N+ +I+QQ +  
Sbjct: 243 VTNLFTILQQFIAN 256


>gi|257462451|ref|ZP_05626864.1| inner membrane protein [Fusobacterium sp. D12]
 gi|317060110|ref|ZP_07924595.1| inner membrane protein YIDC [Fusobacterium sp. D12]
 gi|313685786|gb|EFS22621.1| inner membrane protein YIDC [Fusobacterium sp. D12]
          Length = 125

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 21/141 (14%)

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
              H +NP  GC P+++Q+P+ FA++ V+   + +     + W++ L   DP  IF    
Sbjct: 4   SNKHKVNPAGGCLPLIIQLPILFALFGVLRGGI-IPEDSKFLWLE-LTKPDPFYIF---- 57

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
                          P++     F Q K+     +     ++   P++ +F     P GL
Sbjct: 58  ---------------PLLNGAVSFFQQKLMGNSDNPQMKNMMYMFPIMMIFISYKMPGGL 102

Query: 539 IIYWSWSNVISIVQQAVIMKM 559
            +YW  S++ +++QQ  IMK 
Sbjct: 103 QLYWLTSSLTAVLQQYFIMKK 123


>gi|300857413|ref|YP_003782397.1| putative membrane protein OxaA [Clostridium ljungdahlii DSM 13528]
 gi|300437528|gb|ADK17295.1| predicted membrane protein OxaA [Clostridium ljungdahlii DSM 13528]
          Length = 218

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 26/234 (11%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +  F       + S   N   ++GIAI+L T+ ++++  PL  KQ  S+  M  IQP++ 
Sbjct: 8   FVQFFEFLHHSVTSVIPNQNMSYGIAIILMTIIIRIIILPLGIKQARSSLIMNEIQPEVK 67

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L+EK+ +  PQ  Q+ M++LYK    +P +GC P+L+Q P+  A+Y V +    +    
Sbjct: 68  KLQEKY-KKDPQKAQQEMMKLYKEKGASPFSGCLPLLIQWPILIALYYVFNNLSGINGVS 126

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--PADKG 515
            + WI DLA  D                         I+  ++ F+   +          
Sbjct: 127 -FLWIGDLAKTDIF---------------------LAILSGVTTFLSGYLMMSGNSEQAK 164

Query: 516 QAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
           QA  +N  M  V VF    F A L++YW  SN+I I Q  V+ K+   +  +  
Sbjct: 165 QAKTMNIAMSAVMVFMSIKFKAALVLYWVVSNLIQIAQTVVLKKIEMKKGNIKA 218


>gi|213693342|ref|YP_002323928.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|213524803|gb|ACJ53550.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|320459524|dbj|BAJ70145.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 335

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 103/248 (41%), Gaps = 22/248 (8%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
              +     +       F +M     +  ++ +AI++  + V+   FPL  KQ  S   M
Sbjct: 20  LTPVEWLQTWIMKIVHDFFVMLGMSPIGVSWVLAIIILVLVVQACIFPLFCKQMKSMRKM 79

Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + + PK+  ++ K+K    Q     + +  ++LY+ ++ NP   C P+L+Q PVF +++ 
Sbjct: 80  QALAPKMKRIQNKYKGKTDQASKEAMSRETMKLYQDNDANPAGSCLPMLIQGPVFMSMFY 139

Query: 446 VISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIM 497
            +S    +           D+A A       +FGI+            G + +G +  +M
Sbjct: 140 TLSAIPYIANGKRGALGAFDVATAKQFTQTDVFGIVSVTDNFSRAATSGKVVIGTFVFLM 199

Query: 498 SLSMFIQMKMSPPPADK----------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
              ++     +                 Q  +L   PV+++F+ ++ P  +++YW  +NV
Sbjct: 200 CFCLWFMQYFNMKRNMPAASMNKQAETMQKAMLWLFPVMYIFSGATMPFAVLVYWLTNNV 259

Query: 548 ISIVQQAV 555
            ++ +   
Sbjct: 260 CNLCRTLW 267


>gi|296167146|ref|ZP_06849553.1| membrane protein OxaA [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897468|gb|EFG77067.1| membrane protein OxaA [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 369

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 60/287 (20%), Positives = 109/287 (37%), Gaps = 48/287 (16%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAK 380
            E+L D+    F+  P+  +M  +Y L            + +++M     ++ L +    
Sbjct: 1   MELLFDFFSLDFVYYPVSWIMWAWYKLFAAMLGPSNFFAWALSVMFLVFSLRALLYKPFV 60

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
           +Q  +T  M+ +QP+I  L++K+     Q +   M +L + H  NP+ GC P+L QIPVF
Sbjct: 61  RQIRTTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVF 119

Query: 441 FAIYKVISI---SLEMRHAPFWGWIKD-------LAAADPTNIF--TLFGILP------- 481
             +Y V+     +      P     ++        +  D  +     LFG          
Sbjct: 120 IGLYHVLRSFNRTTGGFGQPHLSVAQNRLTGNYVFSPTDVGHFLDANLFGAPIGAFMTQR 179

Query: 482 --------FYLPGFMHVGI-WPIIMSLSMFIQMK-----MSPPPADKGQAMIL-----NW 522
                   F  P  + VG    I+  ++ +   +      SP  A   Q  ++       
Sbjct: 180 TGLDAFTYFSRPAVIAVGAPVMILAGIATYFNSRASVARQSPEAAANPQTAMMNKLALYV 239

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            P+  V      P  +I+YW  +N+ +  QQ  +  M   E     +
Sbjct: 240 FPLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQ 286


>gi|253800971|ref|YP_003033973.1| hypothetical protein TBMG_03969 [Mycobacterium tuberculosis KZN
           1435]
 gi|253322475|gb|ACT27078.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
          Length = 366

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 100/265 (37%), Gaps = 39/265 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            + +     +               +    + +++M     ++ L +    +Q  +T  M
Sbjct: 10  LDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 69

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP+I  L++K+     Q +   M +L + H  NP+ GC P+L QIPVF  +Y V+  
Sbjct: 70  QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 128

Query: 450 ---SLEMRHAPFWGWIKD-------LAAADPTNIF--TLFGI---------------LPF 482
              +      P    I++        +  D  +     LFG                + F
Sbjct: 129 FNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGLDAFVDF 188

Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVVFVFAL 531
             P  + VG+   I+  ++ +   + S         A+   AM+    L   P+  V   
Sbjct: 189 SRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFPLGVVVGG 248

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556
              P  +++YW  +N+ +  QQ  +
Sbjct: 249 PFLPLAIVLYWFSNNIWTFGQQHYV 273


>gi|134097490|ref|YP_001103151.1| putative inner membrane protein translocase component YidC
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133910113|emb|CAM00226.1| 60 kDa membrane insertion protein [Saccharopolyspora erythraea NRRL
           2338]
          Length = 342

 Score =  105 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 95/246 (38%), Gaps = 30/246 (12%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           + +++      ++++    A  Q  +   M+   P+I +LREK K    Q + + M +L 
Sbjct: 24  WALSVFFLVFSLRVVLLKPAISQMRAGRKMQKFAPQIQKLREKHKN-DRQRMAQEMQKLQ 82

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG- 478
             H +NPL GC P LLQIPVF +++ V+    + +      +I D           +FG 
Sbjct: 83  SEHGVNPLGGCLPALLQIPVFLSLFTVLR---DFKPGAPSNYIFDADGVRSFVEADIFGA 139

Query: 479 --------------ILPFYLPGFMHVGI-WPIIMSLSMFIQMKMSP------PPADKGQA 517
                         +        + VG+   II S++ F  M++S         A+   A
Sbjct: 140 KLSNWIVQSDQELALFGTTRTDMIMVGVPLMIIASVATFFSMRISMKRQTEAAMANPQTA 199

Query: 518 MI----LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           M+    +   PV  + +    P  +++YW  +N  ++ Q   +      E          
Sbjct: 200 MMGKLMMYIAPVGAIVSGPFLPIAVLLYWMANNFWTLGQAHFLTNKIDREEQKAKEAEIA 259

Query: 574 FSKNYN 579
             K   
Sbjct: 260 AKKEAP 265


>gi|313660934|ref|ZP_07817814.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis KZN V2475]
          Length = 363

 Score =  105 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 100/265 (37%), Gaps = 39/265 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            + +     +               +    + +++M     ++ L +    +Q  +T  M
Sbjct: 7   LDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 66

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP+I  L++K+     Q +   M +L + H  NP+ GC P+L QIPVF  +Y V+  
Sbjct: 67  QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 125

Query: 450 ---SLEMRHAPFWGWIKD-------LAAADPTNIF--TLFGI---------------LPF 482
              +      P    I++        +  D  +     LFG                + F
Sbjct: 126 FNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGLDAFVDF 185

Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVVFVFAL 531
             P  + VG+   I+  ++ +   + S         A+   AM+    L   P+  V   
Sbjct: 186 SRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFPLGVVVGG 245

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556
              P  +++YW  +N+ +  QQ  +
Sbjct: 246 PFLPLAIVLYWFSNNIWTFGQQHYV 270


>gi|310641889|ref|YP_003946647.1| oxaa-like protein [Paenibacillus polymyxa SC2]
 gi|309246839|gb|ADO56406.1| OxaA-like protein [Paenibacillus polymyxa SC2]
          Length = 277

 Score =  105 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 37/241 (15%)

Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----I 392
           + +++  P+  L+ +      G+FG+AIM  T  V+L   PL  +Q  +   MK     +
Sbjct: 47  FNHYVVFPLSWLIQHLAQWFGGSFGLAIMTLTFIVRLALLPLMMRQTRAQQGMKRKMSAM 106

Query: 393 QPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVI 447
           QP +D +++K++        Q +Q+ M+ LYK H  NPL  GC PIL+Q+P+   +Y  I
Sbjct: 107 QPDLDRIKKKYENKKDANSQQSMQQEMMSLYKEHQFNPLNIGCLPILIQLPILSGMYTAI 166

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
            ++ E+     + W + L   D                      I  I++++    Q K+
Sbjct: 167 RLTPELASHS-FLWFR-LGQPD---------------------WILAIVVAVVYLAQAKL 203

Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           S       Q      M    P++      + PA + +YW+ S    ++Q     K +  E
Sbjct: 204 SQLQMTADQHKQFAIMGYLSPIMMAVFSFNAPAAMPLYWTVSGTFLLLQSLWFRKRYPIE 263

Query: 564 I 564
            
Sbjct: 264 E 264


>gi|304414030|ref|ZP_07395398.1| putative inner membrane protein [Candidatus Regiella insecticola
           LSR1]
 gi|304283244|gb|EFL91640.1| putative inner membrane protein [Candidatus Regiella insecticola
           LSR1]
          Length = 380

 Score =  105 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 52/271 (19%), Positives = 103/271 (38%), Gaps = 19/271 (7%)

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM----FMLMSYFY 354
            KS T       G      +   + D     F+ +     +  +         +L+    
Sbjct: 114 HKSDTENQVSSMGKTRAQLLLKSDLDQLPQYFQKIKYAHLWAPLRLLCLGIEAILLWLNT 173

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQVLQK 413
                +GI I+L ++  KL   P       +   + ++Q ++    E  K     +   +
Sbjct: 174 IHSFGWGITIILLSLLFKLFILPANILLTRAQRKVSHLQARLAPELEYIKANFTGEEAHQ 233

Query: 414 AMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
             + ++K   ++P          L   P   AI+ V+S    +   P + WI+DLA  D 
Sbjct: 234 KFMAVHKQQGVSPFYNLRSLLLTLAPFPFLIAIFNVLSEMDLIAGHP-FLWIEDLAYPD- 291

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-----QMKMSPPPADKGQAMILNWMPV 525
             I+ L   +P        + + PI+M+L   +     Q K+      + Q + L +M  
Sbjct: 292 -AIYHLGFHIPLLGAS---INLLPILMTLLTILAAVIHQNKIISTKELRKQKLNLYFMAE 347

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            F      FP+ +++YW ++N+  ++QQ  +
Sbjct: 348 GFFLLFYPFPSTMVLYWIFANIWQLIQQRFV 378


>gi|319946179|ref|ZP_08020419.1| ParB/SpoJ family partitioning protein [Streptococcus australis ATCC
           700641]
 gi|319747561|gb|EFV99814.1| ParB/SpoJ family partitioning protein [Streptococcus australis ATCC
           700641]
          Length = 271

 Score =  105 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 94/224 (41%), Gaps = 30/224 (13%)

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTH 422
           L T+ ++ +  P+ + Q  S+  M+ IQP + E++ K+          + + M  LYK  
Sbjct: 60  LFTLLIRTILLPVFQYQMTSSRKMQEIQPLVKEIQAKYPGKDLESRTRMSEEMRALYKEK 119

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
            +   +   P+ +Q+PV  A+++ +S  +E      + W+ D++A DPT           
Sbjct: 120 GVKTSSAFLPLFIQMPVLMALFQALSR-VEFLKVGHFLWL-DMSATDPTF---------- 167

Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFALSSFPAGLI 539
                    I P++ ++  F    +S    P  + G   ++  MPV+  F      +G+ 
Sbjct: 168 ---------ILPVLAAVFTFFSTWLSNKAMPEKNGGMTAMMYAMPVMIFFFAMYSASGVA 218

Query: 540 IYWSWSNVISIVQQAVIM---KMHGAEIGLIDRLRSTFSKNYNS 580
           +YW  SN   + Q  ++    K+  A       ++    +   +
Sbjct: 219 LYWVVSNAYQVGQTYLLNNPFKIIAAREAEQQAIKDIEKQKRRA 262


>gi|226467554|emb|CAX69653.1| preprotein translocase YidC subunit [Schistosoma japonicum]
          Length = 367

 Score =  105 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 97/257 (37%), Gaps = 33/257 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
             Y+       ++   +  +       I  TT+ ++L  FP+  +Q    AN  +  P+ 
Sbjct: 67  NSYWPWGWYQCMLETLHVHLELPWWGAIAATTIAIRLCVFPIIIRQRRHLANFTDNMPQF 126

Query: 397 DELREKF-------KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
             L+E+                 + M +L K +++NPL     + LQ+P+F +++  I  
Sbjct: 127 TILQERMTRARLSGNYIEVMRASQEMNELMKNNDLNPLKSLKYMFLQVPIFLSVFTGIRG 186

Query: 450 SLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
            + +      +    W  DL A+DP  I      LPF     + +           F   
Sbjct: 187 LVNLPVTSMQSGGIAWFTDLTASDPYYI------LPFLSMSTLLLV----------FETG 230

Query: 506 KMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM----KMH 560
             +P P        ++   P++    + + P+ L+ YW+ SN++S +Q  ++     + +
Sbjct: 231 AETPSPHIQPVVRTVMRVFPIIGFVFVVNMPSALVWYWTVSNMLSFLQSLILRYPPFRSY 290

Query: 561 GAEIGLIDRLRSTFSKN 577
                +   L     K 
Sbjct: 291 FNLPPVRAPLSVVNKKR 307


>gi|317509424|ref|ZP_07967042.1| YidC/Oxa1 family membrane protein insertase [Segniliparus rugosus
           ATCC BAA-974]
 gi|316252253|gb|EFV11705.1| YidC/Oxa1 family membrane protein insertase [Segniliparus rugosus
           ATCC BAA-974]
          Length = 320

 Score =  105 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 57/300 (19%), Positives = 109/300 (36%), Gaps = 59/300 (19%)

Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              F+  P+  ++  ++ +            + ++++     ++ L +  A +Q      
Sbjct: 1   MLDFVYYPVSGVLWLWHWVFSQILGPESGFGWALSVVALVCTLRALLYAPAIRQIRFMRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447
           M+ IQP++  ++ K+ +   Q     M +L K H  NPL GC P+LLQIPVF  +Y V+ 
Sbjct: 61  MQEIQPQMKAIQTKYAK-DRQRQALEMQKLQKEHGFNPLLGCLPMLLQIPVFIGLYHVLS 119

Query: 448 ----------------------------------SISLEMR--HAPFWGWIKDLAAADPT 471
                                                LE R    P   +I + AA+   
Sbjct: 120 SFNRTAGAFFSGGGSMTPEQNRNTKNYVFSPHDVQSFLESRFFGVPLSSYITEPAASFNA 179

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSPPPAD---KGQAMILNWM--- 523
            I     +               +I S++  +  +  +S  PAD   + QA ++  M   
Sbjct: 180 FIKAGSAVDFQRWQIAAVAIPLMLIASVATHMNSRASLSRQPADVSEQPQAAMMRVMSLW 239

Query: 524 --PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR--LRSTFSKNYN 579
             P+  +    + P  L++YW  +N  +  QQ ++ +    E     R  +    +    
Sbjct: 240 VFPLGVLIFGWASPIALLLYWVSNNAWTYGQQHLVFRKIDREDEEKKRQAVERRAANAPK 299


>gi|77414384|ref|ZP_00790539.1| SpoIIIJ family protein [Streptococcus agalactiae 515]
 gi|77159574|gb|EAO70730.1| SpoIIIJ family protein [Streptococcus agalactiae 515]
          Length = 266

 Score =  105 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 77/213 (36%), Gaps = 27/213 (12%)

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL-- 427
           L    + K       M   +P  + + E+ + +  Q      Q  ++   + + ++    
Sbjct: 34  LGLYQSWKASYQAEKMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGG 93

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487
            GC P+L+Q+P F AI+     +                   P      F  L       
Sbjct: 94  IGCLPLLIQMPFFSAIFFAARYT-------------------PGVSSATFLGLNLGQKSL 134

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
               I  I+  +  ++ M+  P    +    ++  MP+  VF   S PA + +YW    +
Sbjct: 135 TLTVIIAILYFVQSWLSMQGVPDEQRQQMKTMMYVMPIAMVFMSISLPASVALYWFIGGI 194

Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            SI+QQ V    +  +  L  ++   ++KN   
Sbjct: 195 FSIIQQLVTT--YVLKPKLRRKVEEEYTKNPPK 225


>gi|254818675|ref|ZP_05223676.1| putative inner membrane protein translocase component YidC
           [Mycobacterium intracellulare ATCC 13950]
          Length = 362

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 54/285 (18%), Positives = 100/285 (35%), Gaps = 41/285 (14%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
              +   + +     +               +    + +++M     ++ L +    +Q 
Sbjct: 2   SFDVFSLDFVYYPVSWIMWVWYKLFASMLGPSNFFAWALSVMFLVFSLRALLYKPFVRQI 61

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            +T  M+ +QP+I  L++K+     Q +   M +L + H  NP+ GC P+L QIPVF  +
Sbjct: 62  RTTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFIGL 120

Query: 444 YKVISI---SLEMRHAPFWGWI------------KDLAAADPTNIFT------------L 476
           Y V+     +      P                  D+A     N+F             L
Sbjct: 121 YHVLRSFNRTTGGFGQPHLSVAENRLTGNYVFTPTDVAHFLDANLFGAPIGAFMTQRTGL 180

Query: 477 FGILPFYLPGFMHVGIWP--IIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWMP 524
                F  P  + VG  P  I+  ++ +   +      SP  A   Q  ++        P
Sbjct: 181 DAFTVFSRPAVIAVG-LPVMILAGVATYFNSRASVARQSPEAAANPQTAMMNKLALYVFP 239

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           +  V      P  +I+YW  +N+ +  QQ  +  M   E     +
Sbjct: 240 LGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQ 284


>gi|314935960|ref|ZP_07843310.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80]
 gi|313655966|gb|EFS19708.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80]
          Length = 289

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 106/265 (40%), Gaps = 43/265 (16%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           ++    +PM  ++ +  +     ++GIAI++  + ++++  P     Y ++  M+     
Sbjct: 32  FYNTFVEPMAKILHWLGHSVFHDDYGIAIIVLVLVIRIILLPFMLSNYKNSHMMREKMKI 91

Query: 396 --------IDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + M+++YK ++INP+    GC P+L+Q+P+   +Y
Sbjct: 92  AKPEVEGVQEKVKRARTQEEKMAANQEMMEVYKKYDINPMKSALGCLPVLIQMPIVMGLY 151

Query: 445 KVISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   +   +   P + W  +L   D                         II  +  F
Sbjct: 152 FVLRYRIGGGITEHPHFLWF-NLVHPDIW---------------------ITIIAGVLYF 189

Query: 503 IQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           IQ  +S     + Q  +   M    P++ ++   S  + L +YWS S    I+Q     K
Sbjct: 190 IQAWVSSKQMPEEQRQMTYMMMIVSPIMIIWISLSSASALGLYWSVSAAFLIIQTFFANK 249

Query: 559 MHG--AEIGLIDRLRSTFSKNYNSQ 581
            +   A+  +   + +    N N +
Sbjct: 250 HYEKVAKQEIGPMVEAHKENNSNKK 274


>gi|322374156|ref|ZP_08048690.1| SpoIIIJ family protein [Streptococcus sp. C150]
 gi|321277122|gb|EFX54193.1| SpoIIIJ family protein [Streptococcus sp. C150]
          Length = 268

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 25/195 (12%)

Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNIN 425
            T+ ++ +  PL  +Q  S+  ++ +QP++  L+ ++  S  +     A  +LYK H +N
Sbjct: 61  FTILIRAVMIPLYNRQIKSSRELQELQPELRRLQGEYPGSENREALANAQQELYKEHGVN 120

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           P A   P+L+Q P+  A+Y  ++   E+R    + W+ DL   DP               
Sbjct: 121 PYASFVPLLIQFPILMALYGALTRVPELR-EGTFLWV-DLGQKDPYF------------- 165

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWM-PVVFVFALSSFPAGLIIYW 542
                 I PI+ +   F+   ++   A +  +M  ++N + PV   +  +   +G+ +YW
Sbjct: 166 ------ILPILAAAFTFLSTWLTNKAAKERSSMLLVMNILLPVFIFWFGTQISSGVALYW 219

Query: 543 SWSNVISIVQQAVIM 557
           + SN   +VQ  V  
Sbjct: 220 AVSNAFQVVQILVFN 234


>gi|319946450|ref|ZP_08020687.1| SpoIIIJ family protein [Streptococcus australis ATCC 700641]
 gi|319747418|gb|EFV99674.1| SpoIIIJ family protein [Streptococcus australis ATCC 700641]
          Length = 312

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 94/260 (36%), Gaps = 40/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF----PLAKKQYVSTANMKN 391
           + W          +  +  +L   FG+ I+L TV V+++ F      + K    +  M  
Sbjct: 36  FIWNLIGKPMGEAINFFATDLGLGFGLGIILVTVIVRVIIFPLGIYQSWKATYQSEKMNY 95

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           ++P    ++E+ K +  Q         ++   K + ++P    GC P+L+Q+P F A+Y 
Sbjct: 96  LKPIFAPIQERIKNAETQEEKLLANSELMNAQKENGVSPFGGIGCLPLLIQMPFFSALYF 155

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +                   P      F  +              +++++  +IQ 
Sbjct: 156 AAQYT-------------------PGISKDSFLGIGLGSKSL----ALTLVVAVLYYIQS 192

Query: 506 KMSPPP-ADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            +S     D+ Q   +       P++        PAG+ +YW     + I+QQ VI   +
Sbjct: 193 MLSLHGIEDENQRETMKKTALVSPIMIAVFSLMAPAGVTLYWVVGGFVQIIQQFVIN--Y 250

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
                L  ++   +  N   
Sbjct: 251 LIRPRLRKQVAEEYKNNPPK 270


>gi|227510513|ref|ZP_03940562.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
 gi|227190165|gb|EEI70232.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
          Length = 343

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 103/255 (40%), Gaps = 40/255 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           + ++A+P   +M     +VG++G AI++ TV V++   P+  +Q  S+   +     I  
Sbjct: 37  YDYLARPAQSIMEAIAQIVGSYGWAIVVLTVIVRMFLLPIMVRQMKSSTIQQERMQMIRP 96

Query: 399 LREKFKQS--------PPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVIS 448
              K +Q               +AM+ LY+ +NI+     GC P+++Q+P+F A+Y  I 
Sbjct: 97  QMRKLQQRQKAAKTTEEQTAASQAMMALYRQNNISMTGGIGCLPLIIQMPIFTALYAAIR 156

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
            S E+ H                   T+F  +      ++      ++  LS  +Q  + 
Sbjct: 157 YSPELSH-------------------TVFMGIRLGQSSWL----LAVLSFLSYLLQGYLM 193

Query: 509 PPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
                K Q      ++   P++ +    S PAGL IY+    + + +Q  ++        
Sbjct: 194 MLGTPKAQKKQMGAMMLMSPIMILLFTISAPAGLGIYFFIGGLFACLQTIIMN---LYRP 250

Query: 565 GLIDRLRSTFSKNYN 579
           G+  ++         
Sbjct: 251 GIRKKIAKEMEGKKP 265


>gi|323490539|ref|ZP_08095745.1| membrane protein oxaA [Planococcus donghaensis MPA1U2]
 gi|323395805|gb|EGA88645.1| membrane protein oxaA [Planococcus donghaensis MPA1U2]
          Length = 260

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 36/241 (14%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK------- 390
           +  F+      L        G++G+AI++ T+ ++L+  P   + Y     MK       
Sbjct: 32  YTVFVKPFDVSLNYLGDLFGGSYGLAIVVITIIIRLVLMPFMLRTYKRQQGMKVKMDAMR 91

Query: 391 -NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVIS 448
             ++     L+E   +     LQ+ M+ LYK H +NPL  GC P+++Q+P+   +Y  I 
Sbjct: 92  PEMEDIQKRLKETKDKEEQMKLQQEMMGLYKKHEVNPLNMGCLPVVIQMPIIMGLYFAIL 151

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
            S ++  A  + W   L + D                      I  +I     F Q K+S
Sbjct: 152 HSPDV-QAHEFLWFS-LGSPD---------------------IIMTLIAGAVYFFQAKVS 188

Query: 509 PPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
                + Q   +       P++ +F   +  A L +YW+   ++ I+Q  +  K +    
Sbjct: 189 LWTMPEQQQKQMKLFIYISPIMIMFISFTSMAALPVYWTVGGILLIIQTFIGRKFYSNHP 248

Query: 565 G 565
            
Sbjct: 249 E 249


>gi|296395443|ref|YP_003660327.1| YidC/Oxa1 familymembrane protein insertase [Segniliparus rotundus
           DSM 44985]
 gi|296182590|gb|ADG99496.1| membrane protein insertase, YidC/Oxa1 family [Segniliparus rotundus
           DSM 44985]
          Length = 320

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 57/299 (19%), Positives = 113/299 (37%), Gaps = 58/299 (19%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              F+  P+  ++  ++ +            + ++++     ++ L +  A +Q      
Sbjct: 1   MLDFVYYPVSGVLWVWHWVFSQVLGPKSGFAWALSVVALVCTIRALLYAPAVRQIRFMRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447
           M+ +QP++  ++ K+     Q     M +L + H  NPL GC P+LLQIPVF  +Y V+ 
Sbjct: 61  MQELQPQMKAIQAKY-GKDRQRQALEMQKLQQEHGFNPLLGCLPMLLQIPVFIGLYHVLS 119

Query: 448 ----------------------------------SISLEMR--HAPFWGWIKDLAAADPT 471
                                                LE R    P   +I + AA+   
Sbjct: 120 SFNRTAGAFFSGGGSLTPEQNRNTSNYVFSPADVQSFLESRFFGVPLSSYILEPAASFDA 179

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSPPPAD---KGQAMILNWM--- 523
            I     +        +      II S++  +  +  +S  PAD   + QA ++  M   
Sbjct: 180 FIRAGSAVEFQRWQIALVAVPLMIIASVATHMNSRASLSRQPADVAEQPQAAMMRVMSLW 239

Query: 524 --PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
             P+  +    + P  L++YW  +N  +  QQ ++ +    E     +L++   +  N+
Sbjct: 240 VFPLGVLIFGWASPIALLLYWVSNNAWTYGQQHLVFRKIDQEDE-EKKLQAIQRRAANA 297


>gi|195442310|ref|XP_002068901.1| GK18022 [Drosophila willistoni]
 gi|194164986|gb|EDW79887.1| GK18022 [Drosophila willistoni]
          Length = 469

 Score =  104 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 85/215 (39%), Gaps = 38/215 (17%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PP 408
               +  AI + T+ V+ L FPL      ++A M N  P++  L+ K  ++         
Sbjct: 151 WDIPWWGAIAIGTLVVRTLIFPLVIVAQRNSAKMSNNMPQMQLLQLKMTEARQSGNAIES 210

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKD 464
               + M+   +   +NPL      L Q P+F      + ++ +  +E        W +D
Sbjct: 211 ARYAQEMMLFMREKGVNPLKNMVVPLAQAPLFISFFMGLRQMANAPVESMRDGGLWWFQD 270

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQA 517
           L  ADP                     + P+I S ++++         ++S    +    
Sbjct: 271 LTLADPFY-------------------LLPLITSATLYLTIEIGTDSARLSAANMNTM-K 310

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            +L  +P+V      +FP+ ++ YW+ SN IS+ Q
Sbjct: 311 YVLRALPLVIFPFTMNFPSAILTYWACSNFISLGQ 345


>gi|300791163|ref|YP_003771454.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei
           U32]
 gi|299800677|gb|ADJ51052.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei
           U32]
          Length = 384

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 105/261 (40%), Gaps = 43/261 (16%)

Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++  ++ +           ++ + I+  T  V+ + F     Q  S   
Sbjct: 1   MLDFIYYPVSFILWCWHKVFGFVFGEATAVSWILGIIFLTFTVRGIMFKPFVNQVRSMKK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M++  P++ ++++K+     Q     M +L K H +NPL  C P+LLQIPVF  +  V+ 
Sbjct: 61  MQDFAPEMKKIQKKYAN-DRQRQAAEMQKLQKEHGVNPLGSCLPMLLQIPVFIGLNHVLR 119

Query: 449 ISLEM-------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG---------- 491
            +  M       +   ++    D+ +     +F +      Y    +  G          
Sbjct: 120 -AFTMPPPGGGPKTENYFFTQADVHSYVSAKLFGVNLGEAVYNGVGVVSGGAANVGFQWS 178

Query: 492 IWP------IIMSLSMFIQMK-----MSPPPADKGQAMI----LNWMPVVFVFALSSFPA 536
           + P      I+ S++  +  +      +   A    A++    +   P+  +   + FP 
Sbjct: 179 VLPVALPLMIVASIATHLTARHSVARQNAASATPQTAIMNKLTMYIFPLGVLVFGALFPL 238

Query: 537 GLIIYWSWSNVISIVQQAVIM 557
           GL+ YW  +N  +++QQ ++ 
Sbjct: 239 GLLFYWLANNGWTLMQQRLVY 259


>gi|283457086|ref|YP_003361650.1| YidC Inner membrane protein (Preprotein translocase subunit YidC)
           [Bifidobacterium dentium Bd1]
 gi|283103720|gb|ADB10826.1| YidC Inner membrane protein (Preprotein translocase subunit YidC)
           [Bifidobacterium dentium Bd1]
          Length = 309

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 102/223 (45%), Gaps = 22/223 (9%)

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           +   + +  ++ ++I+   + V    FPL  K   S   M+ IQPK+  ++ K+K    Q
Sbjct: 14  LLGMHPVGFSWVLSIIFLVLVVHACVFPLYYKTMKSMRKMQEIQPKMARIQNKYKGKNDQ 73

Query: 410 V----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM-RHAPFWGWIKD 464
                +Q+ M++LY+ ++ NP+  C P+L+Q P+F  ++  +S    + R         D
Sbjct: 74  ASKEAMQREMMKLYQDNDANPMGSCLPMLIQGPIFMCMFYTLSAIPYIARGKRAALGAFD 133

Query: 465 LAAADPTNIFTLFGILPFY------LPGFMHVGIWPIIMSLSMFIQM----KMSPPPADK 514
            A A      T+F            + G + + I+  +M   ++       K + P    
Sbjct: 134 QATALQFTKTTVFNTNVTDNFMTANIGGKVVIAIFVALMCFCLWFMQYNNMKRNMPQNGP 193

Query: 515 ------GQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISI 550
                     ++ WM P++++F+ ++ P  +++YW  +N++++
Sbjct: 194 QTKQTEMMQKMMLWMFPIMYIFSGATMPFAVLVYWLANNILNL 236


>gi|313884144|ref|ZP_07817910.1| membrane protein insertase, YidC/Oxa1 family [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620591|gb|EFR32014.1| membrane protein insertase, YidC/Oxa1 family [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 314

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 91/256 (35%), Gaps = 36/256 (14%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE- 398
           Y        L    +   G++GIAI++ T+  ++   P   K    +             
Sbjct: 40  YIGIPTSHFLDWLAHIFGGSYGIAIIIVTLITRIFMIPSTLKMTKGSMTSAAKMKVAQPE 99

Query: 399 -------LREKFKQSPPQVLQKAMIQLYKTHNINPL---AGCWPILLQIPVFFAIYKVIS 448
                  +           LQ+ ++ +YK ++IN L   +GC P+L+Q+P+  A+Y  I 
Sbjct: 100 INEIQAEIEAATSDQEKMQLQQELMTVYKKYDINMLGGVSGCLPLLIQMPIISAVYAAIR 159

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
            S  ++++                    F  +         V    II  +  ++  K  
Sbjct: 160 SSEAIKNSH-------------------FLGINLGERSLGIVIAVVIIGFIQGWLSTKAM 200

Query: 509 PPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           P   +         ++   P++  +      AGL IY+   ++ SI QQ  +   H  + 
Sbjct: 201 PASDNPQAQQTSKSMMLINPLMIGYITYISAAGLGIYFLVGSIFSIFQQLYMN--HVVKP 258

Query: 565 GLIDRLRSTFSKNYNS 580
            +   + +   +  N+
Sbjct: 259 KVQAEIDAHAERFKNA 274


>gi|118620076|ref|YP_908408.1| putative inner membrane protein translocase component YidC
           [Mycobacterium ulcerans Agy99]
 gi|118572186|gb|ABL06937.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99]
          Length = 371

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 100/265 (37%), Gaps = 39/265 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            E +     +          +    +    + +++M     ++ L +    +Q  +T  M
Sbjct: 10  LEFVYYPVSWIMWVWYKLFALVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 69

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP+I  L++K+     Q +   M +L + H  NP+ GC P+L QIPVF  +Y V+  
Sbjct: 70  QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 128

Query: 450 S--------------LEMRHAPFWGWIK-DLAAADPTNIFT------------LFGILPF 482
                          +E R    + +   D+      N+F             L   + F
Sbjct: 129 FNRTTGGFGQPHLSVVENRLTGNYVFTPTDVGHFLDVNLFGAPIGASMTQRGGLDAFVDF 188

Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWMPVVFVFAL 531
             P  + VG+   ++  ++ +   +      SP  A   Q  ++        P+  V   
Sbjct: 189 SRPAVIAVGVPVMVLAGVATYFNSRASVARQSPEAAANPQTAMMNKLALYVFPLGVVVGG 248

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556
              P  +I+YW  +N+ +  QQ  +
Sbjct: 249 PFLPLAIILYWFSNNIWTFGQQHYV 273


>gi|46190726|ref|ZP_00121168.2| COG0706: Preprotein translocase subunit YidC [Bifidobacterium
           longum DJO10A]
 gi|322692115|ref|YP_004221685.1| hypothetical protein BLLJ_1929 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320456971|dbj|BAJ67593.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 305

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 103/231 (44%), Gaps = 22/231 (9%)

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           F +M     +  ++ +AI++  + V+   FPL  KQ  S   M+ + PK+  ++ K+K  
Sbjct: 7   FFVMLGVSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKMQALAPKMQRIQNKYKGK 66

Query: 407 PPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR-HAPFWGW 461
             Q  ++      ++LY+ +++NP   C P+L+Q PVF +++  +S    +         
Sbjct: 67  TDQASREAMSRETMKLYQDNDVNPAGSCLPMLIQGPVFMSMFYTLSAIPYIANGKRDALG 126

Query: 462 IKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIMSLSMFIQM----KMSPP 510
             D+A A       +FGI+            G   +GI+  +M   ++       K +  
Sbjct: 127 AFDVATAKQFTQTDVFGIVSVTDNFTSAAASGKAVIGIFVFLMCFCLWFMQYFSMKRNMA 186

Query: 511 PADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
            A         Q  +L   PV+++F+  + P  +++YW  +NV ++ +   
Sbjct: 187 AASMNKQTETMQKAMLWLFPVMYIFSGVAMPFAVLVYWLTNNVCNLCRTLW 237


>gi|195326627|ref|XP_002030027.1| GM24796 [Drosophila sechellia]
 gi|194118970|gb|EDW41013.1| GM24796 [Drosophila sechellia]
          Length = 441

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 87/232 (37%), Gaps = 39/232 (16%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     +   M + +          I + T+ V+ + FPL      ++A M N  P++  
Sbjct: 131 WSPVGMVQNCMEFLHCTWEIPWWGTIAIGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQM 190

Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVI 447
           L+ K  ++             + M+   +   +NPL      L Q P+F      + ++ 
Sbjct: 191 LQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKNMVVPLAQAPLFISFFMGLRQMA 250

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504
           +  +E        W  DL  ADP                     + P+I S ++++    
Sbjct: 251 NAPVESMRDGGLFWFTDLTMADPYY-------------------LLPLITSATLYLTIEI 291

Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
                ++S    +     +L  +P+V      +FPA ++ YW+ SN IS+ Q
Sbjct: 292 GTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQ 342


>gi|71013508|ref|XP_758604.1| hypothetical protein UM02457.1 [Ustilago maydis 521]
 gi|46098262|gb|EAK83495.1| hypothetical protein UM02457.1 [Ustilago maydis 521]
          Length = 550

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 89/241 (36%), Gaps = 36/241 (14%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS--- 385
              +        +I   +  +          +   I +TTV ++LL  P++     +   
Sbjct: 209 ELGLNHWVTPPGWITNLLEFV---GTTTGLPWWGTITITTVALRLLIAPISIAGQKNAIR 265

Query: 386 ----TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
                  MK     I   +    Q   Q    A  +L + +N NP+    PIL Q P+ F
Sbjct: 266 LGNIQPEMKRNMDDIKHYKAAGDQMQMQKAVMATQKLLRDNNANPIKSLVPILFQFPLMF 325

Query: 442 AIYKVI-----SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           + +  +     S S    H   + W  DL   DPT I      L  +    +   +    
Sbjct: 326 SYFLALERIAKSGSESFAHGGPF-WTTDLTVPDPTWILPAISTLATFAVAEVGFKVG--- 381

Query: 497 MSLSMFIQMKMSPPPADKGQAMILNW-----MPVVFVFALSSFPAGLIIYWSWSNVISIV 551
                      +   +D  Q+ ++ +     MP+   +  ++FP+G+++YW+ +N+ S+ 
Sbjct: 382 -----------TNSQSDPAQSQMMKYIFRGFMPI-LAWFSTTFPSGVLVYWATTNLYSLA 429

Query: 552 Q 552
           Q
Sbjct: 430 Q 430


>gi|171741737|ref|ZP_02917544.1| hypothetical protein BIFDEN_00828 [Bifidobacterium dentium ATCC
           27678]
 gi|171277351|gb|EDT45012.1| hypothetical protein BIFDEN_00828 [Bifidobacterium dentium ATCC
           27678]
          Length = 336

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 107/260 (41%), Gaps = 22/260 (8%)

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
           +    +              +             F+ +   + +  ++ ++I+   + V 
Sbjct: 4   QNQFLLDSGFWGWLYKLLTPIEWLMTQIMAIFHKFLTLLGMHPVGFSWVLSIIFLVLVVH 63

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLA 428
              FPL  K   S   M+ IQPK+  ++ K+K    Q     +Q+ M++LY+ ++ NP+ 
Sbjct: 64  ACVFPLYYKTMKSMRKMQEIQPKMARIQNKYKGKNDQASKEAMQREMMKLYQDNDANPMG 123

Query: 429 GCWPILLQIPVFFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGILPFY---- 483
            C P+L+Q P+F  ++  +S    + R         D A A      T+F          
Sbjct: 124 SCLPMLIQGPIFMCMFYTLSAIPYIARGKRAALGAFDQATALQFTKTTVFNTNVTDNFMT 183

Query: 484 --LPGFMHVGIWPIIMSLSMFIQM----KMSPPPADK------GQAMILNWM-PVVFVFA 530
             + G + + I+  +M   ++       K + P              ++ WM P++++F+
Sbjct: 184 ANIGGKVVIAIFVALMCFCLWFMQYNNMKRNMPQNGPQTKQTEMMQKMMLWMFPIMYIFS 243

Query: 531 LSSFPAGLIIYWSWSNVISI 550
            ++ P  +++YW  +N++++
Sbjct: 244 GATMPFAVLVYWLANNILNL 263


>gi|283797193|ref|ZP_06346346.1| SpoJ protein [Clostridium sp. M62/1]
 gi|291075151|gb|EFE12515.1| SpoJ protein [Clostridium sp. M62/1]
          Length = 414

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 61/305 (20%), Positives = 109/305 (35%), Gaps = 81/305 (26%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412
           V N G+ I+L T+  +LL FPL  KQ  S+  M  + P+I  +++K+K    Q      Q
Sbjct: 36  VFNIGVCIILFTIITRLLLFPLTLKQQKSSKMMALMNPEIAAIQKKYKGKTDQTSMAKQQ 95

Query: 413 KAMIQLYKTHNINPLAGCWPILLQI-------------PVFFAIYKVISISLE--MRHAP 457
             M  +Y+ +  +P AGC P+L+Q              P +    +V   ++   +++ P
Sbjct: 96  VEMKAVYEKYGSSPTAGCLPLLIQFPIILALYRVIYNIPAYVPSVRVFFENVVEPLQNQP 155

Query: 458 FW------------------------------------GW---------IKDLAAA--DP 470
            +                                     W         I D+ A   D 
Sbjct: 156 DFASKLIEVGGKMSNGFTAEALANPNKVIDLLYKFTPDNWKGLENAFPSIADVIAQNADK 215

Query: 471 TNIFTLFGILPFYLPGFMHVG------IWPIIMSLSMFIQMKMSP--------PPADKGQ 516
                 F  +      F          I PI+  ++ ++  K+           P  +  
Sbjct: 216 IEQMNSFLGINLATAPFTGFSNITVAWIIPILAGITQWLSTKLMSTNQTMDKDAPGAQMM 275

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
             ++  MP++ VF   + PAG+ IYW    +I I QQ  +      ++ + + +R    K
Sbjct: 276 NSMMITMPLMSVFFCFTLPAGIGIYWVVQGIILIFQQMFVNSYMK-KVDMDELIRKNVEK 334

Query: 577 NYNSQ 581
               +
Sbjct: 335 MNKKR 339


>gi|228474911|ref|ZP_04059640.1| putative membrane protein [Staphylococcus hominis SK119]
 gi|228271143|gb|EEK12523.1| putative membrane protein [Staphylococcus hominis SK119]
          Length = 289

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 105/265 (39%), Gaps = 43/265 (16%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           ++    +PM  ++ +  +     ++GIAI++  + ++++  P     Y ++  M+     
Sbjct: 32  FYNTFVEPMAKILHWLGHSVFHDDYGIAIIVLVLVIRIILLPFMLSNYKNSHMMREKMKI 91

Query: 396 --------IDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + M+++YK ++INP+    GC P+L+Q+P+   +Y
Sbjct: 92  AKPEVEGVQEKVKRARTQEEKMAANQEMMEVYKKYDINPMKSALGCLPVLIQMPIVMGLY 151

Query: 445 KVISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   +   +   P + W  +L   D                         II  +  F
Sbjct: 152 FVLRYRIGGGITEHPHFLWF-NLVHPDIW---------------------ITIIAGVLYF 189

Query: 503 IQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           IQ  +S     + Q  +   M    P++ ++   S  + L +YWS      I+Q     K
Sbjct: 190 IQAWVSSKQMPEEQRQMTYMMMIVSPIMIIWISLSSASALGLYWSVGAAFLIIQTFFANK 249

Query: 559 MHG--AEIGLIDRLRSTFSKNYNSQ 581
            +   A+  +   + +    N N +
Sbjct: 250 HYEKVAKQEIGPMVEAHKENNSNKK 274


>gi|294781807|ref|ZP_06747140.1| stage III sporulation protein J [Fusobacterium sp. 1_1_41FAA]
 gi|294481917|gb|EFG29685.1| stage III sporulation protein J [Fusobacterium sp. 1_1_41FAA]
          Length = 206

 Score =  104 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 23/208 (11%)

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
               VGNFG++I++ T+ +K+   PL  KQ  ST  MK +QP+I++L+EK+     Q+L 
Sbjct: 19  TDKYVGNFGVSIIIVTILIKIALLPLTLKQDKSTKEMKKLQPEIEKLKEKYANDK-QMLN 77

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
              ++LYK H +NPL GC P+LLQ+P+ FA++ V+   + +     + W+K L   DP  
Sbjct: 78  IKTMELYKEHKVNPLGGCLPLLLQLPILFALFGVLRSGI-IPADSSFLWLK-LPEPDPFF 135

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-ILNWMPVVFVFAL 531
                              I P++     F Q K+        Q   ++   P++ +F  
Sbjct: 136 -------------------ILPVLNGAVSFFQQKLMGSADSNPQMKNMMYIFPIMMIFIS 176

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKM 559
              P+GL +YW  S+V+++VQQ  IMK 
Sbjct: 177 YRMPSGLQLYWLTSSVLAVVQQYFIMKK 204


>gi|306823999|ref|ZP_07457373.1| membrane protein OxaA [Bifidobacterium dentium ATCC 27679]
 gi|309801939|ref|ZP_07696053.1| membrane protein insertase, YidC/Oxa1 family [Bifidobacterium
           dentium JCVIHMP022]
 gi|304552997|gb|EFM40910.1| membrane protein OxaA [Bifidobacterium dentium ATCC 27679]
 gi|308221387|gb|EFO77685.1| membrane protein insertase, YidC/Oxa1 family [Bifidobacterium
           dentium JCVIHMP022]
          Length = 336

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 107/260 (41%), Gaps = 22/260 (8%)

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
           +    +              +             F+ +   + +  ++ ++I+   + V 
Sbjct: 4   QNQFLLDSGFWGWLYKLLTPIEWLMTQIMAIFHKFLTLLGMHPVGFSWVLSIIFLVLVVH 63

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLA 428
              FPL  K   S   M+ IQPK+  ++ K+K    Q     +Q+ M++LY+ ++ NP+ 
Sbjct: 64  ACVFPLYYKTMKSMRKMQEIQPKMARIQNKYKGKNDQASKEAMQREMMKLYQDNDANPMG 123

Query: 429 GCWPILLQIPVFFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGILPFY---- 483
            C P+L+Q P+F  ++  +S    + R         D A A      T+F          
Sbjct: 124 SCLPMLIQGPIFMCMFYTLSAIPYIARGKRAALGAFDQATALQFTKTTVFNTNVTDNFMT 183

Query: 484 --LPGFMHVGIWPIIMSLSMFIQM----KMSPPPADK------GQAMILNWM-PVVFVFA 530
             + G + + I+  +M   ++       K + P              ++ WM P++++F+
Sbjct: 184 ANIGGKVVIAIFVALMCFCLWFMQYNNMKRNMPQNGPQTKQTEMMQKMMLWMFPIMYIFS 243

Query: 531 LSSFPAGLIIYWSWSNVISI 550
            ++ P  +++YW  +N++++
Sbjct: 244 GATMPFAVLVYWLANNILNL 263


>gi|322515972|ref|ZP_08068912.1| SpoIIIJ family protein [Streptococcus vestibularis ATCC 49124]
 gi|322125571|gb|EFX96906.1| SpoIIIJ family protein [Streptococcus vestibularis ATCC 49124]
          Length = 284

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 27/202 (13%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-A 414
             G+ G+ I++ T+ ++ +  PL  +Q  S+  ++ +QP++  L+ ++     +     A
Sbjct: 66  FGGSIGLGIIIFTILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYA 125

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
             +LYK H +NP A   P+++Q P+  A+Y  ++   E+R    + W+ DL   DP    
Sbjct: 126 QQELYKEHGVNPYASLLPLIIQFPILMALYGALTRVPELR-EGTFLWV-DLGQKDPYF-- 181

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534
                            I PI+ +   F+   ++   A    A +L  M ++    +  F
Sbjct: 182 -----------------ILPILAAAFTFLSTWLTNKAAKDRSA-MLLVMNIMLSIFIFWF 223

Query: 535 ----PAGLIIYWSWSNVISIVQ 552
                +G+ +YW+ SN   +VQ
Sbjct: 224 GTQISSGVALYWAVSNAFQVVQ 245


>gi|300120462|emb|CBK20016.2| Oxa1 [Blastocystis hominis]
          Length = 441

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 97/250 (38%), Gaps = 33/250 (13%)

Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
           Y   L     +  +           +  L+++  ++   +  AI   T+ ++L+  PL  
Sbjct: 110 YMTGLNDAALKYGLFGVTIGTPTTWVVSLLTWVNSMGIPWWGAIAGVTLGLRLVLLPLTI 169

Query: 381 KQYVSTANMKNIQPKIDELREKF-------KQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433
           K     A +  IQP++++L E+          +  Q ++  M+ LYK   ++P +  +  
Sbjct: 170 KSTRQRAKLAEIQPELNKLLERARLSQSMGMAADAQGMRDEMLSLYKNAGVSPFSPLFGA 229

Query: 434 LLQIPVFFAIYKVIS---ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
            +QIPV  + +  +     ++         W  +LAAADP                    
Sbjct: 230 FIQIPVVISCFMGVRKLCETVPAVTTGGLSWFTNLAAADPYF------------------ 271

Query: 491 GIWPIIMSLSMFIQMKMSPPPADKG----QAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546
            + P++  LS     ++     +         ++  M +  VF  +  PAGL  YW+ ++
Sbjct: 272 -VLPVVTGLSTLFMTELGADGMNGNGQVGMKYMMRGMSLFMVFIAAKLPAGLCFYWTVNS 330

Query: 547 VISIVQQAVI 556
           +++  Q   I
Sbjct: 331 ILACCQTLAI 340


>gi|254777659|ref|ZP_05219175.1| putative inner membrane protein translocase component YidC
           [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 353

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 109/288 (37%), Gaps = 50/288 (17%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAK 380
            ++L D+    F+  P+  +M  +Y L            + +++M     ++ L +    
Sbjct: 1   MDLLFDFFSLDFVYYPVSWIMWVWYKLFAAMLGPSNFFAWALSVMFLVFTLRALLYKPFV 60

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
           +Q  +T  M+ +QP+I  L++K+     Q +   M +L + H  NP+ GC P+L QIPVF
Sbjct: 61  RQIRTTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVF 119

Query: 441 FAIYKVISI---SLEMRHAPFWGWIKD---------------------LAAADPTNIFTL 476
             +Y V+     +      P    +++                       A     +   
Sbjct: 120 LGLYHVLRSFNRTTGGFGQPHLSVVQNRLTGNYVFTPTDVGHFLDANLFGAPIGAFMTQR 179

Query: 477 FGILPFYL---PGFMHVGIWP--IIMSLSMFIQMK-----MSPPPADKGQAMIL-----N 521
            G+  F     P  + VG  P  I+  ++ +   +      SP  A   Q  ++      
Sbjct: 180 TGLDAFTYFSRPAVIAVG-LPVMILAGVATYFNSRASVARQSPEAAANPQTAMMNKLALY 238

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
             P+  V      P  +I+YW  +N+ +  QQ  +  M   E     +
Sbjct: 239 VFPLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQ 286


>gi|41410445|ref|NP_963281.1| putative inner membrane protein translocase component YidC
           [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|38503196|sp|Q9L7M1|OXAA_MYCPA RecName: Full=Membrane protein oxaA
 gi|6969277|gb|AAF33698.1| unknown [Mycobacterium avium subsp. paratuberculosis]
 gi|41399279|gb|AAS06897.1| hypothetical protein MAP_4347c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 353

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 109/288 (37%), Gaps = 50/288 (17%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAK 380
            ++L D+    F+  P+  +M  +Y L            + +++M     ++ L +    
Sbjct: 1   MDLLFDFFSLDFVYYPVSWIMWVWYKLFAAMLGPSNFFAWALSVMFLVFTLRALLYKPFV 60

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
           +Q  +T  M+ +QP+I  L++K+     Q +   M +L + H  NP+ GC P+L QIPVF
Sbjct: 61  RQIRTTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVF 119

Query: 441 FAIYKVISI---SLEMRHAPFWGWIKD---------------------LAAADPTNIFTL 476
             +Y V+     +      P    +++                       A     +   
Sbjct: 120 LGLYHVLRSFNRTTGGFGQPHLSVVQNRLTGNYVFTPTDVGHFLDANLFGAPIGAFMTQR 179

Query: 477 FGILPFYL---PGFMHVGIWP--IIMSLSMFIQMK-----MSPPPADKGQAMIL-----N 521
            G+  F     P  + VG  P  I+  ++ +   +      SP  A   Q  ++      
Sbjct: 180 TGLDAFTYFSRPAVIAVG-LPVMILAGVATYFNSRASVARQSPEAAANPQTAMMNKLALY 238

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
             P+  V      P  +I+YW  +N+ +  QQ  +  M   E     +
Sbjct: 239 VFPLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQ 286


>gi|253752397|ref|YP_003025538.1| membrane protein OxaA 2 precursor [Streptococcus suis SC84]
 gi|253754223|ref|YP_003027364.1| membrane protein OxaA 2 precursor [Streptococcus suis P1/7]
 gi|253756157|ref|YP_003029297.1| membrane protein OxaA 2 precursor [Streptococcus suis BM407]
 gi|251816686|emb|CAZ52327.1| membrane protein OxaA 2 precursor [Streptococcus suis SC84]
 gi|251818621|emb|CAZ56455.1| membrane protein OxaA 2 precursor [Streptococcus suis BM407]
 gi|251820469|emb|CAR47193.1| membrane protein OxaA 2 precursor [Streptococcus suis P1/7]
          Length = 304

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 99/253 (39%), Gaps = 40/253 (15%)

Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKNIQ 393
           + ++ +PM  L+ +F  +    FG+AI++ T+ V+ +        + K  + +  M  ++
Sbjct: 37  WDWLGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYLK 96

Query: 394 PKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
           P +  ++E+ K +  Q  Q    +      K + ++ L   GC P+L+Q+P F AIY   
Sbjct: 97  PILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIY--- 153

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
                 RH P       L                  +       I  ++  +  + Q  +
Sbjct: 154 ---FAARHTPGISEATFLG-----------------INLGSTSLILTVVAGILYYAQSLL 193

Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                D+ Q   +  M    P++ +      PAG+ +YW    +  I+QQA+       +
Sbjct: 194 MQVGMDEEQKKQMKTMALMNPIMIMMFSFGSPAGVTLYWVVGGLFGILQQAITN--FILK 251

Query: 564 IGLIDRLRSTFSK 576
             +  ++   F  
Sbjct: 252 PRIRKQVEEEFKN 264


>gi|257869607|ref|ZP_05649260.1| inner membrane protein [Enterococcus gallinarum EG2]
 gi|257803771|gb|EEV32593.1| inner membrane protein [Enterococcus gallinarum EG2]
          Length = 306

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 98/261 (37%), Gaps = 39/261 (14%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
               + + +     ++     N   ++G AI+  T+ V+L+  PL   Q   T       
Sbjct: 32  NGMIYRFLVKPLGNLITMLVENFDWSYGWAIIAVTIVVRLIILPLGIHQSKKTMIQSEKM 91

Query: 394 P--------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAI 443
                        L++   +      Q  M ++Y  +N++     GC P+L+Q+P+F A+
Sbjct: 92  QFLKPQVDIAQANLKKATTREEQMQAQADMQKIYSENNVSMFGGIGCLPLLIQMPIFSAL 151

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           Y     +  ++++ F+G                   +    P F+ V I      +S  I
Sbjct: 152 YFTARYTQGIQNSEFFG-------------------ISLGQPSFLFVAI----AGISYLI 188

Query: 504 QMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           Q  +S     + Q   +  M    P++ VF   S PAG+ +YW    V S +Q  +   +
Sbjct: 189 QGYISTIGIPEEQKKTMKTMLIVSPLMIVFMSLSAPAGVTLYWVVGGVFSCLQTFITNVI 248

Query: 560 HGAEIGLIDRLRSTFSKNYNS 580
              +  +  ++ +    N   
Sbjct: 249 M--KPKIRAQVEAEMKANPPK 267


>gi|226309516|ref|YP_002769478.1| OxaA family protein [Rhodococcus erythropolis PR4]
 gi|226188635|dbj|BAH36739.1| putative OxaA family protein [Rhodococcus erythropolis PR4]
          Length = 368

 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 106/297 (35%), Gaps = 56/297 (18%)

Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++  ++ +            + ++++     ++ + +    KQ  +T  
Sbjct: 1   MLNFIYYPVSAILWVWHKVFGFILGPDNGIAWALSVVFLVFTLRAVLYKPFVKQVRTTRQ 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QP+I  L++K+     Q     M +L K H  NP+ GC P+L Q PVF  ++ V+ 
Sbjct: 61  MQELQPQIKALQKKYSG-DRQRQAVEMQKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVLR 119

Query: 449 I-------------SLE----------------------MRHAPFWGWIKDLAAADPTNI 473
                         S E                      +  AP    I    A     +
Sbjct: 120 SFNRTGTGMGQLGMSAEDNLNTPNYVFSATDVQSFLDARLFGAPISAAITTPVAQLQAYV 179

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWM 523
                 LP  L   +      II S++     +      S   A   Q+ I+        
Sbjct: 180 TENVPELPSRLNIILVAAPLMIIASIATHFNSRASVARQSEAAAANPQSAIMNKLALYVF 239

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           P+  +      P  +++YW  +N+ +  QQ ++ +   AE     +  +   +N N+
Sbjct: 240 PLGVLVGGPFLPIAILLYWVSNNIWTYGQQHLVFRKIDAEEEAKKQ-EAITRRNDNA 295


>gi|319758802|gb|ADV70744.1| preprotein translocase subunit YidC [Streptococcus suis JS14]
          Length = 326

 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 99/253 (39%), Gaps = 40/253 (15%)

Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKNIQ 393
           + ++ +PM  L+ +F  +    FG+AI++ T+ V+ +        + K  + +  M  ++
Sbjct: 59  WDWLGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYLK 118

Query: 394 PKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
           P +  ++E+ K +  Q  Q    +      K + ++ L   GC P+L+Q+P F AIY   
Sbjct: 119 PILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFAA 178

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
                 RH P       L                  +       I  ++  +  + Q  +
Sbjct: 179 ------RHTPGISEATFLG-----------------INLGSTSLILTVVAGILYYAQSLL 215

Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                D+ Q   +  M    P++ +      PAG+ +YW    +  I+QQA+       +
Sbjct: 216 MQVGMDEEQKKQMKTMALMNPIMIMMFSFGSPAGVTLYWVVGGLFGILQQAITN--FILK 273

Query: 564 IGLIDRLRSTFSK 576
             +  ++   F  
Sbjct: 274 PRIRKQVEEEFKN 286


>gi|23465227|ref|NP_695830.1| hypothetical protein BL0644 [Bifidobacterium longum NCC2705]
 gi|189440301|ref|YP_001955382.1| preprotein translocase subunit [Bifidobacterium longum DJO10A]
 gi|239622847|ref|ZP_04665878.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|317482355|ref|ZP_07941375.1| YidC/Oxa1 family membrane protein insertase [Bifidobacterium sp.
           12_1_47BFAA]
 gi|38503029|sp|Q8G6J6|OXAA_BIFLO RecName: Full=Membrane protein oxaA
 gi|23325856|gb|AAN24466.1| conserved hypothetical transmembrane protein in the 60 kDa inner
           membrane protein family [Bifidobacterium longum NCC2705]
 gi|189428736|gb|ACD98884.1| Preprotein translocase subunit [Bifidobacterium longum DJO10A]
 gi|239514844|gb|EEQ54711.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|316916235|gb|EFV37637.1| YidC/Oxa1 family membrane protein insertase [Bifidobacterium sp.
           12_1_47BFAA]
          Length = 335

 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 22/248 (8%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
              +     +       F +M     +  ++ +AI++  + V+   FPL  KQ  S   M
Sbjct: 20  LTPVEWLQTWIMKIVHDFFVMLGVSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKM 79

Query: 390 KNIQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + + PK+  ++ K+K    Q  ++      ++LY+ +++NP   C P+L+Q PVF +++ 
Sbjct: 80  QALAPKMQRIQNKYKGKTDQASREAMSRETMKLYQDNDVNPAGSCLPMLIQGPVFMSMFY 139

Query: 446 VISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIM 497
            +S    +           D+A A       +FGI+            G   +GI+  +M
Sbjct: 140 TLSAIPYIANGKRDALGAFDVATAKQFTQTDVFGIVSVTDNFTSAAASGKAVIGIFVFLM 199

Query: 498 SLSMFIQM----KMSPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
              ++       K +   A         Q  +L   PV+++F+  + P  +++YW  +NV
Sbjct: 200 CFCLWFMQYFSMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGVAMPFAVLVYWLTNNV 259

Query: 548 ISIVQQAV 555
            ++ +   
Sbjct: 260 CNLCRTLW 267


>gi|195069813|ref|XP_001997036.1| GH23226 [Drosophila grimshawi]
 gi|193906228|gb|EDW05095.1| GH23226 [Drosophila grimshawi]
          Length = 449

 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 87/232 (37%), Gaps = 39/232 (16%)

Query: 340 YFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     +   M + +      +   I + T+ V+ L FPL      ++A M N  P++  
Sbjct: 137 WSPVGMVQQCMEFLHCTWDIPWWGTIAIGTICVRTLIFPLVILAQRNSARMSNNMPQMQV 196

Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIYKVI 447
           L+ K  ++             + M+   +   +NPL      L Q P     F  + ++ 
Sbjct: 197 LQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKNMIVPLAQAPLFLSFFMGLRQMA 256

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504
           +  +E        W  DL  ADP                     + P+I S ++++    
Sbjct: 257 NTPVESMRDGGLFWFTDLTMADPFY-------------------LLPVITSATLYLTIEL 297

Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
                ++S    +     +L  +P+V      +FPA ++ YW+ SN IS+ Q
Sbjct: 298 GTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQ 348


>gi|194868587|ref|XP_001972309.1| GG13956 [Drosophila erecta]
 gi|190654092|gb|EDV51335.1| GG13956 [Drosophila erecta]
          Length = 441

 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 88/232 (37%), Gaps = 39/232 (16%)

Query: 340 YFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     +   + + +      +   I + T+ V+ + FPL      ++A M N  P++  
Sbjct: 131 WSPVGMVQNCLEFLHCTWDIPWWGTIAIGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQM 190

Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVI 447
           L+ K  ++             + M+   +   +NPL      L Q P+F      + ++ 
Sbjct: 191 LQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKNMVVPLAQAPLFISFFMGLRQMA 250

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504
           +  +E        W  DL  ADP                     + P+I S ++++    
Sbjct: 251 NAPVESMRDGGLFWFTDLTLADPFY-------------------LLPLITSATLYLTIEI 291

Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
                ++S    +     +L  +P+V      +FPA ++ YW+ SN IS+ Q
Sbjct: 292 GTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQ 342


>gi|146319369|ref|YP_001199081.1| preprotein translocase subunit YidC [Streptococcus suis 05ZYH33]
 gi|145690175|gb|ABP90681.1| Preprotein translocase subunit YidC [Streptococcus suis 05ZYH33]
          Length = 326

 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 99/253 (39%), Gaps = 40/253 (15%)

Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKNIQ 393
           + ++ +PM  L+ +F  +    FG+AI++ T+ V+ +        + K  + +  M  ++
Sbjct: 59  WDWLGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYLK 118

Query: 394 PKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
           P +  ++E+ K +  Q  Q    +      K + ++ L   GC P+L+Q+P F AIY   
Sbjct: 119 PILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFAA 178

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
                 RH P       L                  +       I  ++  +  + Q  +
Sbjct: 179 ------RHTPGISEATFLG-----------------INLGSTSLILTVVAGILYYAQSLL 215

Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                D+ Q   +  M    P++ +      PAG+ +YW    +  I+QQA+       +
Sbjct: 216 MQVGMDEEQKKQMKTMALMNPIMIMMFSFGSPAGVTLYWVVGGLFGILQQAITN--FILK 273

Query: 564 IGLIDRLRSTFSK 576
             +  ++   F  
Sbjct: 274 PRIRKQVEEEFKN 286


>gi|195021527|ref|XP_001985412.1| GH17044 [Drosophila grimshawi]
 gi|193898894|gb|EDV97760.1| GH17044 [Drosophila grimshawi]
          Length = 457

 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 87/232 (37%), Gaps = 39/232 (16%)

Query: 340 YFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     +   M + +      +   I + T+ V+ L FPL      ++A M N  P++  
Sbjct: 137 WSPVGMVQQCMEFLHCTWDIPWWGTIAIGTICVRTLIFPLVILAQRNSARMSNNMPQMQV 196

Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIYKVI 447
           L+ K  ++             + M+   +   +NPL      L Q P     F  + ++ 
Sbjct: 197 LQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKNMIVPLAQAPLFLSFFMGLRQMA 256

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504
           +  +E        W  DL  ADP                     + P+I S ++++    
Sbjct: 257 NTPVESMRDGGLFWFTDLTMADPFY-------------------LLPVITSATLYLTIEL 297

Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
                ++S    +     +L  +P+V      +FPA ++ YW+ SN IS+ Q
Sbjct: 298 GTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQ 348


>gi|182416735|ref|ZP_02948134.1| membrane protein OxaA [Clostridium butyricum 5521]
 gi|237669614|ref|ZP_04529592.1| 60 kDa inner membrane insertion protein [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182379392|gb|EDT76887.1| membrane protein OxaA [Clostridium butyricum 5521]
 gi|237654848|gb|EEP52410.1| putative sporulation protein/membrane protein insertase, OxaA
           family [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 258

 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 18/231 (7%)

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
               +L  ++ +AI+  TV V+LL  P   K   ST  M+ IQP+I ++++K+ +S PQ 
Sbjct: 23  MGVTDLGLSYVLAILAFTVAVRLLILPFNIKAAKSTRGMQKIQPEIKKIQDKY-KSDPQK 81

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAAD 469
           +   +++LYK +N++ + GC P LL +P+  A+Y V    +L       + WIKD+ A D
Sbjct: 82  MNTEVMKLYKDNNVSMVGGCLPTLLPLPILMALYWVFMGINLPEGQVASFLWIKDVFAPD 141

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFV 528
           P  I  +   L  YLP                ++  K +P          +N M   +  
Sbjct: 142 PYYILAIVAALSTYLPS---------------YLMTKATPQQPGGMSMGTMNLMMAGMMG 186

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           F   +F A L++YW   N+I  VQ   +      +  +         +   
Sbjct: 187 FMSLNFKAILVLYWIMGNLIQAVQTYFLNYRPAVKDKIKQETAVNRQEENK 237


>gi|15611057|ref|NP_218438.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis H37Rv]
 gi|15843555|ref|NP_338592.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis CDC1551]
 gi|31795094|ref|NP_857587.1| putative inner membrane protein translocase component YidC
           [Mycobacterium bovis AF2122/97]
 gi|148663788|ref|YP_001285311.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis H37Ra]
 gi|148825129|ref|YP_001289883.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis F11]
 gi|167969459|ref|ZP_02551736.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis H37Ra]
 gi|215405979|ref|ZP_03418160.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis 02_1987]
 gi|215413849|ref|ZP_03422514.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis 94_M4241A]
 gi|215425183|ref|ZP_03423102.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis T92]
 gi|215432902|ref|ZP_03430821.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis EAS054]
 gi|215448268|ref|ZP_03435020.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis T85]
 gi|219555768|ref|ZP_03534844.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis T17]
 gi|254233403|ref|ZP_04926729.1| hypothetical protein TBCG_03848 [Mycobacterium tuberculosis C]
 gi|254366457|ref|ZP_04982501.1| conserved transmembrane protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254548925|ref|ZP_05139372.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|260184850|ref|ZP_05762324.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis CPHL_A]
 gi|260198981|ref|ZP_05766472.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis T46]
 gi|260203134|ref|ZP_05770625.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis K85]
 gi|289441364|ref|ZP_06431108.1| conserved membrane protein [Mycobacterium tuberculosis T46]
 gi|289445522|ref|ZP_06435266.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289556189|ref|ZP_06445399.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
 gi|289567878|ref|ZP_06448105.1| conserved membrane protein [Mycobacterium tuberculosis T17]
 gi|289572573|ref|ZP_06452800.1| membrane protein oxaA [Mycobacterium tuberculosis K85]
 gi|289747765|ref|ZP_06507143.1| conserved transmembrane protein [Mycobacterium tuberculosis
           02_1987]
 gi|289748459|ref|ZP_06507837.1| conserved membrane protein [Mycobacterium tuberculosis T92]
 gi|289756056|ref|ZP_06515434.1| membrane protein oxaA [Mycobacterium tuberculosis EAS054]
 gi|289760094|ref|ZP_06519472.1| membrane protein oxaA [Mycobacterium tuberculosis T85]
 gi|289764112|ref|ZP_06523490.1| conserved transmembrane protein [Mycobacterium tuberculosis GM
           1503]
 gi|294995603|ref|ZP_06801294.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis 210]
 gi|297733603|ref|ZP_06962721.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis KZN R506]
 gi|298527393|ref|ZP_07014802.1| membrane protein oxaA [Mycobacterium tuberculosis 94_M4241A]
 gi|306778285|ref|ZP_07416622.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|306778815|ref|ZP_07417152.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|306786842|ref|ZP_07425164.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|306795591|ref|ZP_07433893.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|306801566|ref|ZP_07438234.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|306970172|ref|ZP_07482833.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
 gi|306974404|ref|ZP_07487065.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|307082112|ref|ZP_07491282.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|307086723|ref|ZP_07495836.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|308375034|ref|ZP_07667929.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|54038804|sp|P65627|OXAA_MYCBO RecName: Full=Membrane protein oxaA
 gi|54041693|sp|P65626|OXAA_MYCTU RecName: Full=Membrane protein oxaA
 gi|2808706|emb|CAA16234.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium
           tuberculosis H37Rv]
 gi|13883933|gb|AAK48406.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31620692|emb|CAD96138.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis
           AF2122/97]
 gi|124603196|gb|EAY61471.1| hypothetical protein TBCG_03848 [Mycobacterium tuberculosis C]
 gi|134151969|gb|EBA44014.1| conserved transmembrane protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507940|gb|ABQ75749.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis H37Ra]
 gi|148723656|gb|ABR08281.1| conserved transmembrane protein [Mycobacterium tuberculosis F11]
 gi|289414283|gb|EFD11523.1| conserved membrane protein [Mycobacterium tuberculosis T46]
 gi|289418480|gb|EFD15681.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289440821|gb|EFD23314.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
 gi|289537004|gb|EFD41582.1| membrane protein oxaA [Mycobacterium tuberculosis K85]
 gi|289541631|gb|EFD45280.1| conserved membrane protein [Mycobacterium tuberculosis T17]
 gi|289688293|gb|EFD55781.1| conserved transmembrane protein [Mycobacterium tuberculosis
           02_1987]
 gi|289689046|gb|EFD56475.1| conserved membrane protein [Mycobacterium tuberculosis T92]
 gi|289696643|gb|EFD64072.1| membrane protein oxaA [Mycobacterium tuberculosis EAS054]
 gi|289711618|gb|EFD75634.1| conserved transmembrane protein [Mycobacterium tuberculosis GM
           1503]
 gi|289715658|gb|EFD79670.1| membrane protein oxaA [Mycobacterium tuberculosis T85]
 gi|298497187|gb|EFI32481.1| membrane protein oxaA [Mycobacterium tuberculosis 94_M4241A]
 gi|308213435|gb|EFO72834.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|308328152|gb|EFP17003.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|308328614|gb|EFP17465.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|308343887|gb|EFP32738.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|308347671|gb|EFP36522.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|308351589|gb|EFP40440.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|308352296|gb|EFP41147.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
 gi|308356299|gb|EFP45150.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|308360186|gb|EFP49037.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|308363873|gb|EFP52724.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|323717337|gb|EGB26542.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
 gi|326905754|gb|EGE52687.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
 gi|328460699|gb|AEB06122.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207]
          Length = 366

 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 100/265 (37%), Gaps = 39/265 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            + +     +               +    + +++M     ++ L +    +Q  +T  M
Sbjct: 10  LDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 69

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP+I  L++K+     Q +   M +L + H  NP+ GC P+L QIPVF  +Y V+  
Sbjct: 70  QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 128

Query: 450 ---SLEMRHAPFWGWIKD-------LAAADPTNIF--TLFGI---------------LPF 482
              +      P    I++        +  D  +     LFG                + F
Sbjct: 129 FNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGLDAFVDF 188

Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVVFVFAL 531
             P  + VG+   I+  ++ +   + S         A+   AM+    L   P+  V   
Sbjct: 189 SRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFPLGVVVGG 248

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556
              P  +I+YW  +N+ +  QQ  +
Sbjct: 249 PFLPLAIILYWFSNNIWTFGQQHYV 273


>gi|306830170|ref|ZP_07463354.1| SpoIIIJ family protein [Streptococcus mitis ATCC 6249]
 gi|304427696|gb|EFM30792.1| SpoIIIJ family protein [Streptococcus mitis ATCC 6249]
          Length = 312

 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 79/213 (37%), Gaps = 32/213 (15%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+ L   GC+P
Sbjct: 86  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMLGGVGCFP 145

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+Q+P F AIY    ++ E   +  +  I DL +                        I
Sbjct: 146 ILIQMPFFSAIYFAAQLT-EGVASSTFLGI-DLGSP---------------------SMI 182

Query: 493 WPIIMSLSMFIQMKMSPPP-ADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
                 +  ++Q  +S     D+ Q      ++   P++ V      PA + +YW     
Sbjct: 183 LVAFAGILYYLQSILSLHGVEDEMQREQLKKMIYMSPLMIVVFSFFSPASVTLYWVVGGF 242

Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           + I+QQ ++   +     L  ++R  F+KN   
Sbjct: 243 MMILQQFIVN--YVVRPKLRKKVREEFAKNPPK 273


>gi|121635907|ref|YP_976130.1| putative inner membrane protein translocase component YidC
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|121639832|ref|YP_980056.1| putative inner membrane protein translocase component YidC
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224992327|ref|YP_002647017.1| putative inner membrane protein translocase component YidC
           [Mycobacterium bovis BCG str. Tokyo 172]
 gi|121491554|emb|CAL70011.1| Probable conserved transmembrane protein [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|121495480|emb|CAL73969.1| Probable conserved transmembrane protein [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|224775443|dbj|BAH28249.1| putative inner membrane protein translocase component YidC
           [Mycobacterium bovis BCG str. Tokyo 172]
          Length = 366

 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 100/265 (37%), Gaps = 39/265 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            + +     +               +    + +++M     ++ L +    +Q  +T  M
Sbjct: 10  LDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 69

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP+I  L++K+     Q +   M +L + H  NP+ GC P+L QIPVF  +Y V+  
Sbjct: 70  QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 128

Query: 450 ---SLEMRHAPFWGWIKD-------LAAADPTNIF--TLFGI---------------LPF 482
              +      P    I++        +  D  +     LFG                + F
Sbjct: 129 FNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGLDVFVDF 188

Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVVFVFAL 531
             P  + VG+   I+  ++ +   + S         A+   AM+    L   P+  V   
Sbjct: 189 SRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFPLGVVVGG 248

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556
              P  +I+YW  +N+ +  QQ  +
Sbjct: 249 PFLPLAIILYWFSNNIWTFGQQHYV 273


>gi|312862441|ref|ZP_07722684.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           vestibularis F0396]
 gi|311102084|gb|EFQ60284.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           vestibularis F0396]
          Length = 284

 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 27/202 (13%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-A 414
             G+ G+ I++ T+ ++ +  PL  +Q  S+  ++ +QP++  L+ ++     +     A
Sbjct: 66  FGGSIGLGIIIFTILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYA 125

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
             +LYK H +NP A   P+++Q P+  A+Y  ++   E+R    + W+ DL   DP    
Sbjct: 126 QQELYKEHGVNPYASLLPLIIQFPILMALYGALTRVPELR-EGTFLWV-DLGQKDPYF-- 181

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534
                            I PI+ +   F+   ++   A    A +L  M ++    +  F
Sbjct: 182 -----------------ILPILAAAFTFLSTWLTNKAAKDRSA-MLLVMNIMLSIFIFWF 223

Query: 535 ----PAGLIIYWSWSNVISIVQ 552
                +G+ +YW+ SN   +VQ
Sbjct: 224 GTQISSGVALYWAVSNAFQVVQ 245


>gi|326390366|ref|ZP_08211925.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325993643|gb|EGD52076.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 206

 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 23/220 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              IA  +  L+ + ++ VGN+GIAI++ T+ +++L  P   +Q  +   MK IQP ++E
Sbjct: 1   MATIAMYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMSTMKKMKEIQPLVEE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L++K+ +  PQ L    ++LY+   +NP  GC P+LL + + + ++ ++        A  
Sbjct: 61  LQKKYAK-DPQKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTAS- 118

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W+  LA  DP                     I PI+ +++ +I   M     DK Q  
Sbjct: 119 FLWMHSLAQKDPYY-------------------IIPILATVTTYISSAM--VATDKSQNS 157

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +   M +   +   S PAG+ IYW  SN+  IVQQ + M+
Sbjct: 158 MNIMMSIFMGWVTVSLPAGVGIYWVTSNIFQIVQQYIFMR 197


>gi|218755713|ref|ZP_03534509.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis GM 1503]
 gi|297636608|ref|ZP_06954388.1| putative inner membrane protein translocase component YidC
           [Mycobacterium tuberculosis KZN 4207]
 gi|308371552|ref|ZP_07667203.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
 gi|308336269|gb|EFP25120.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
          Length = 363

 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 100/265 (37%), Gaps = 39/265 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            + +     +               +    + +++M     ++ L +    +Q  +T  M
Sbjct: 7   LDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 66

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP+I  L++K+     Q +   M +L + H  NP+ GC P+L QIPVF  +Y V+  
Sbjct: 67  QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 125

Query: 450 ---SLEMRHAPFWGWIKD-------LAAADPTNIF--TLFGI---------------LPF 482
              +      P    I++        +  D  +     LFG                + F
Sbjct: 126 FNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGLDAFVDF 185

Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVVFVFAL 531
             P  + VG+   I+  ++ +   + S         A+   AM+    L   P+  V   
Sbjct: 186 SRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFPLGVVVGG 245

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556
              P  +I+YW  +N+ +  QQ  +
Sbjct: 246 PFLPLAIILYWFSNNIWTFGQQHYV 270


>gi|322690180|ref|YP_004209914.1| hypothetical protein BLIF_2003 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320461516|dbj|BAJ72136.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 310

 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 22/242 (9%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
              +       F +M     +  ++ +AI++  + V+   FPL  KQ  S   M+ + PK
Sbjct: 1   MQTWIMKIVHDFFVMLGVSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKMQALAPK 60

Query: 396 IDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +  ++ K+K    Q  ++      ++LY+ +++NP   C P+L+Q PVF +++  +S   
Sbjct: 61  MQRIQNKYKGKTDQASREAMSRETMKLYQDNDVNPAGSCLPMLIQGPVFMSMFYTLSAIP 120

Query: 452 EMR-HAPFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIMSLSMFI 503
            +           D+A A       +FGI+            G   +GI+  +M   ++ 
Sbjct: 121 YIANGKRDALGAFDVATAKQFTQTDVFGIVSVTDNFTSAAASGKAVIGIFVFLMCFCLWF 180

Query: 504 QM----KMSPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
                 K +   A         Q  +L   PV+++F+  + P  +++YW  +NV ++ + 
Sbjct: 181 MQYFSMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGVAMPFAVLVYWLTNNVCNLCRT 240

Query: 554 AV 555
             
Sbjct: 241 LW 242


>gi|310288302|ref|YP_003939561.1| preprotein translocase subunit YidC [Bifidobacterium bifidum S17]
 gi|309252239|gb|ADO53987.1| preprotein translocase subunit YidC [Bifidobacterium bifidum S17]
          Length = 336

 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 52/296 (17%), Positives = 111/296 (37%), Gaps = 34/296 (11%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +              L        +    F+ +     +  ++ +AI+   + V     
Sbjct: 8   LLDRGIWGWLYKLLTPLEWLMTQVMVLFHKFLTLLGMAPIGISWVLAIVFLVLVVHACIL 67

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWP 432
           P+  KQ  S   M+ +QPK+  ++ K+K    Q     + + M++LY+ ++ NP+  CW 
Sbjct: 68  PIYLKQMKSMRKMQALQPKMQHIQNKYKGKKDQASKEAMSREMMKLYQDNDANPMGSCWT 127

Query: 433 ILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL---- 484
            ++Q PVF  ++ ++     I+   R A       D A A+      +FG+         
Sbjct: 128 AVIQGPVFMCMFYMLSAIPYIATGKRGA---LGAFDQATAEQFAQTRVFGVSVTDTFGTA 184

Query: 485 --PGFMHVGIWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALS 532
              G + +G + ++M   M+     +               K Q  +    P++++F+  
Sbjct: 185 NNSGKVVIGFFILLMCACMWYMQFNNMRKNLPKASMQGSTYKMQQAMTWGFPIMYIFSGI 244

Query: 533 SFPAGLIIYWSWSNVISIVQQAV-IMK------MHGAEIGLIDRLRSTFSKNYNSQ 581
            FP  +++YW  +N  ++ +    + K          E  + D  +    +    Q
Sbjct: 245 MFPFAVLVYWLTNNACNLARSLFQVYKFPTPGSRAAEEKEIRDHRQENARRAKAGQ 300


>gi|229491230|ref|ZP_04385058.1| putative membrane protein [Rhodococcus erythropolis SK121]
 gi|229321968|gb|EEN87761.1| putative membrane protein [Rhodococcus erythropolis SK121]
          Length = 368

 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 106/297 (35%), Gaps = 56/297 (18%)

Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++  ++ +            + ++++     ++ + +    KQ  +T  
Sbjct: 1   MLNFIYYPVSAILWVWHKVFGFILGPDNGIAWALSVVFLVFTLRAVLYKPFVKQVRTTRQ 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QP+I  L++K+     Q     M +L K H  NP+ GC P+L Q PVF  ++ V+ 
Sbjct: 61  MQELQPQIKALQKKYSG-DRQRQAVEMQKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVLR 119

Query: 449 I-------------SLE----------------------MRHAPFWGWIKDLAAADPTNI 473
                         S E                      +  AP    I    A     +
Sbjct: 120 SFNRTGTGMGQLGMSAEDNLNTPNYVFSATDVQSFLDARLFGAPISAAITTPVAQLQAYV 179

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWM 523
                 LP  L   +      II S++     +      S   A   Q+ I+        
Sbjct: 180 TENVPELPSRLNIILVAAPLMIIASIATHFNSRASVARQSEAAAANPQSAIMNKLALYVF 239

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           P+  +      P  +++YW  +N+ +  QQ ++ +   AE     +  +   +N N+
Sbjct: 240 PLGVLVGGPFLPIAILLYWVSNNIWTYGQQHLVFRKIDAEEEAKKQ-EAITRRNDNA 295


>gi|294786223|ref|ZP_06751477.1| membrane protein OxaA [Parascardovia denticolens F0305]
 gi|315225756|ref|ZP_07867544.1| membrane protein OxaA [Parascardovia denticolens DSM 10105]
 gi|294485056|gb|EFG32690.1| membrane protein OxaA [Parascardovia denticolens F0305]
 gi|315119888|gb|EFT83020.1| membrane protein OxaA [Parascardovia denticolens DSM 10105]
          Length = 329

 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 87/221 (39%), Gaps = 19/221 (8%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434
           F           A    +Q   ++ + K   +  + + +  +++Y+ +++NP   C P L
Sbjct: 65  FIKQMVSMRNMQAVQPQLQKIQNKYKGKTDPASREAMSRETMKIYQDNHVNPAGSCIPAL 124

Query: 435 LQIPVFFAIYKVI-SISLEMRHAPFWGWIKDLAA---ADPTNIFTLFGILPF---YLPGF 487
           +Q PVF A++  +  ++     A       D A         +F +     F      G 
Sbjct: 125 IQSPVFMAMFYTLSMVTYISNGARGPLGAFDKAVSTEFAQARVFNITLSSMFTTANPGGK 184

Query: 488 MHVGIWPIIMSLSMFIQMKMS---PPPADKGQ------AMILNW-MPVVFVFALSSFPAG 537
           + +GI+  +M  +MF     +     P    Q       M++++  PV+++F+  +FP  
Sbjct: 185 ITIGIFVALMCFTMFYSQWHNTRRNMPRASMQGRSYRTQMMMSFIFPVMYIFSGIAFPFA 244

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE--IGLIDRLRSTFSK 576
           +++YW  +N+ ++ Q                  + +  + +
Sbjct: 245 VLVYWLTNNIWTLGQTFWQTYNMPTPGSPAAEAKEKRDYKR 285


>gi|196003362|ref|XP_002111548.1| hypothetical protein TRIADDRAFT_23561 [Trichoplax adhaerens]
 gi|190585447|gb|EDV25515.1| hypothetical protein TRIADDRAFT_23561 [Trichoplax adhaerens]
          Length = 305

 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 94/238 (39%), Gaps = 39/238 (16%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           Y     +   +   ++ VG      IM+ T  ++ L  PL  + Y ++A M NI P +  
Sbjct: 35  YTPIGLLQHAIDSLHSYVGLPWWGSIMVATAILRALTLPLVVRSYRNSARMNNISPTVSR 94

Query: 399 LREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISIS 450
           L  K + +P Q       + +  L++ HN NP       LLQ+PVF      + ++ +  
Sbjct: 95  LMNKMRAAPTQQEAALYSQELRLLFQKHNCNPFKSLISPLLQVPVFISFFLGLRRMCTAP 154

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507
           LE        W  DL AADP                     + P++  ++M + +++   
Sbjct: 155 LESMKDGGMYWFTDLTAADPYY-------------------VLPVLSCVTMLLTLELGTE 195

Query: 508 ----SPPPADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
               +     +    ++     ++ +  +   + FP  +  YW  SN  S++Q  ++ 
Sbjct: 196 VGARNSGMQQQATMKVMKIVFRFLAIGMLPVTAQFPTAIFCYWLTSNSCSMLQMVILN 253


>gi|326503820|dbj|BAK02696.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 421

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 100/247 (40%), Gaps = 35/247 (14%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           E+       +F    +  ++   +   G N+   I LTTV ++    PL   Q  S+  +
Sbjct: 121 EVAAAATDSFFPVAALQHVIDTIHTFTGLNWWACIALTTVLIRTATIPLLVSQLKSSQKL 180

Query: 390 KNIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
             I+P+++ +++    + P+     +  M  L++ H ++P +    IL+Q P+F + +  
Sbjct: 181 NAIKPEMEAIKDAMDSTDPKSALEGKYKMTALFQKHGVSPFSPLKGILIQGPMFMSFFFA 240

Query: 447 ISISLE----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           I+  +E    M+    + W  DL   DP  I                    P++ +L+  
Sbjct: 241 INNMVEKVPSMKGGGVF-WFTDLTTPDPLYIC-------------------PVLAALTFL 280

Query: 503 IQMKMS---PPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             ++++       +     +  +   M ++ V    +F  G+  YW  SN+ S+    ++
Sbjct: 281 ATVELNLQEGMEGNSMAGKMKTFSRGMALMTVPFTMNFAKGIFCYWITSNLFSLG-YGIV 339

Query: 557 MKMHGAE 563
           M+     
Sbjct: 340 MRRPAVR 346


>gi|222151988|ref|YP_002561148.1| hypothetical protein MCCL_1745 [Macrococcus caseolyticus JCSC5402]
 gi|222121117|dbj|BAH18452.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 286

 Score =  103 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 106/289 (36%), Gaps = 36/289 (12%)

Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV-----GNFGIAIM 365
             K+   +  +   + +   +   +     F        +    + +      N+G+AI+
Sbjct: 1   MKKKSIWLLVFTAAIILSGCDYSKESNRNGFFYDTFVHPLDQLIHWLGAHMGHNYGLAII 60

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMK--------NIQPKIDELREKFKQSPPQVLQKAMIQ 417
             T+ V+L  FP   K Y + + M+         +    + ++    Q       + M+ 
Sbjct: 61  AITLIVRLALFPFMMKTYKNQSVMREKMALIKPQMTEIQERVKRARTQEEKMEANQEMMA 120

Query: 418 LYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLE--MRHAPFWGWIKDLAAADPTNIF 474
           LYK + INPL  GC P+L+Q+P+   ++ V+    E  +   P + W +           
Sbjct: 121 LYKENGINPLNMGCLPLLIQLPIVTGLFYVLKYPTEGGITQYPNFLWFE----------- 169

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534
                            I  I+ +L  ++ M+  P        M++   P++ V+  +  
Sbjct: 170 -------LTKTDIAMTVIAGIVYALQAYVSMQNIPEEQKAQMRMMMFISPIMIVWMSAIS 222

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEI--GLIDRLRSTFSKNYNSQ 581
           PA L +YW+      ++Q  +  K +  ++   +   + +        Q
Sbjct: 223 PAALPLYWAVGGAFLVLQTWLGNKFYKKKVHEEIAPLIEAHEENERAKQ 271


>gi|237738569|ref|ZP_04569050.1| inner membrane protein YIDC [Fusobacterium sp. 2_1_31]
 gi|229424052|gb|EEO39099.1| inner membrane protein YIDC [Fusobacterium sp. 2_1_31]
          Length = 206

 Score =  103 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 23/208 (11%)

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
               VGNFG++I++ T+ +K+   PL  KQ  S   MK IQP++++L+EK+     Q+L 
Sbjct: 19  TDKYVGNFGVSIIIVTILIKIALLPLTLKQDKSMKEMKKIQPELEKLKEKYANDK-QMLN 77

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
              ++LYK H +NPL GC P+LLQ+P+ FA++ V+   + +     + W+K L   DP  
Sbjct: 78  IKTMELYKEHKVNPLGGCLPLLLQLPILFALFGVLRSGI-IPADSSFLWLK-LPEPDPFF 135

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-ILNWMPVVFVFAL 531
                              + P++     F Q K+        Q   ++   P++ +F  
Sbjct: 136 -------------------VLPVLNGAVSFFQQKLMGSADSNPQMKNMMYIFPIMMIFIS 176

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKM 559
              P+GL +YW  S+++++VQQ  IMK 
Sbjct: 177 YRMPSGLQLYWLTSSILAVVQQYFIMKK 204


>gi|270292097|ref|ZP_06198312.1| SpoIIIJ family protein [Streptococcus sp. M143]
 gi|270279625|gb|EFA25467.1| SpoIIIJ family protein [Streptococcus sp. M143]
          Length = 309

 Score =  103 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 94/260 (36%), Gaps = 40/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--------FPLAKKQYVSTA 387
           + W    A     +  +  ++   FG+ I++ T+ V+L+         +          A
Sbjct: 39  FIWNTIGAPMAEAIKYFANDMGLGFGMGIIIVTIIVRLIILPLGIYQSWKATLHSEKMNA 98

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
               ++P    L+E   Q      Q+A+    K H I+ L   GC+PILLQ+P F AIY 
Sbjct: 99  LKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMLGGVGCFPILLQMPFFSAIYF 158

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  +                    F  +    P  +          +  +IQ 
Sbjct: 159 AAQHTEGVAGSS-------------------FLGIELGSPSML----LVAFAGILYYIQS 195

Query: 506 KMSPPP-ADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            +S     D+ Q      ++   P++ V      PA + +YW     + I+QQ ++   +
Sbjct: 196 LLSLHGVEDEMQREQLKKMIYMSPLMIVIFSLFSPASVTLYWVVGGFMMILQQFIVN--Y 253

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
                L  ++R  + KN   
Sbjct: 254 VVRPKLRQKVREEYEKNPPK 273


>gi|326804334|ref|YP_004322152.1| stage III sporulation protein J [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650548|gb|AEA00731.1| stage III sporulation protein J [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 253

 Score =  103 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 27/224 (12%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +     +++        ++G+ I++ T+  +LL  PL   Q  +T  M+ +QP++  L
Sbjct: 15  YVLYNLSQIIIWLSGVFGNSYGMGIIVFTILARLLLTPLYSLQMKNTEKMQKMQPELRAL 74

Query: 400 REKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +EK+        Q LQ+   +L + ++ N  AGC P+L+Q+P+  A+Y+ IS +  + + 
Sbjct: 75  QEKYASRDAETQQKLQEETAKLQEKYDTNQFAGCLPLLIQLPILTALYQAISRTEALTN- 133

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---D 513
             + W++ L   DP                     I PII ++S++    +S   +    
Sbjct: 134 GHFLWME-LGKPDPYF-------------------ILPIIAAVSIWYSTHLSQIASGIKS 173

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
                +   MPV   F + + P+ L +Y + +NV +I Q  +I 
Sbjct: 174 GSMTAMQYVMPVFIFFVMMNLPSALALYMATANVFTIGQTLLIN 217


>gi|187934380|ref|YP_001887736.1| inner membrane protein translocase component YidC [Clostridium
           botulinum B str. Eklund 17B]
 gi|187722533|gb|ACD23754.1| putative sporulation protein/membrane protein insertase, OxaA
           family [Clostridium botulinum B str. Eklund 17B]
          Length = 259

 Score =  103 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 18/230 (7%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            FE +I +    F     F++     ++  ++ +AI++ T+ ++L+  PL  K   ST  
Sbjct: 1   MFEKIIQFMANIFNYLHDFIVNLGVSDVGLSYVLAILIFTLMIRLIILPLNIKAAKSTQK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QPK+ +L+EK+K +P + L + M + YK ++++   GC P LL +P+  A+Y V  
Sbjct: 61  MQAVQPKMKKLQEKYKGNPEK-LNEEMRKFYKENDVSVTGGCLPSLLPLPILMALYYVFF 119

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
               M  A  + WI DL A D T I  +   L  YLP                ++  K +
Sbjct: 120 RIEGMNGAS-FLWIADLGAKDKTMILPILAALSTYLPS---------------YLMTKAT 163

Query: 509 PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           P          +   M ++  F   +F + L++YW   NVI  +Q   + 
Sbjct: 164 PMDDSPMNMGTMSLVMALMMGFMSINFKSILVLYWIIGNVIQSIQTYFLN 213


>gi|307265440|ref|ZP_07546996.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|306919554|gb|EFN49772.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter
           wiegelii Rt8.B1]
          Length = 206

 Score =  103 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 23/220 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              IA  +  L+ + ++ VGN+GIAI++ T+ +++L  P   +Q  +   MK IQP I+E
Sbjct: 1   MATIAMYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMSTMKKMKEIQPLIEE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L++K+ +  PQ L    ++LY+   +NP  GC P+LL + + + ++ ++        A  
Sbjct: 61  LQKKYAK-DPQKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTAS- 118

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W+  LA  DP                     I PI+ +++ +I   M     DK Q  
Sbjct: 119 FLWMHSLAQKDPYY-------------------IIPILATVTTYISSAM--VATDKSQNS 157

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +   M +   +   S PAG+ IYW  SN+  IVQQ + M+
Sbjct: 158 MNIMMSIFMGWVTVSLPAGVGIYWVTSNIFQIVQQYIFMR 197


>gi|251780751|ref|ZP_04823671.1| putative sporulation protein/membrane protein insertase, OxaA
           family [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243085066|gb|EES50956.1| putative sporulation protein/membrane protein insertase, OxaA
           family [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 259

 Score =  103 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 18/230 (7%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            FE +I +    F     F+L     ++  ++ +AI++ T+ ++LL  PL  K   ST  
Sbjct: 1   MFEKIIQFMANIFNYLHDFILNLGVSDVGLSYVLAILIFTLMIRLLILPLNIKAAKSTQK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QP++ +L+EK+K +P + L + M + YK ++++   GC P LL +P+  A+Y V  
Sbjct: 61  MQAVQPQMKKLQEKYKGNPEK-LNEEMRKFYKENDVSLTGGCLPSLLPLPILMALYYVFF 119

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
               M  A  + WIKDL A D T I  +   +  YLP                ++  K +
Sbjct: 120 RIEGMNGAS-FLWIKDLGARDTTMILPILAAISTYLPS---------------YLMTKAT 163

Query: 509 PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           P          +   M ++  F   +F + L++YW   NVI  +Q   + 
Sbjct: 164 PMDDSPMNMGTMSLVMALMMGFMSINFKSILVLYWIIGNVIQTIQTYFLN 213


>gi|223933720|ref|ZP_03625694.1| 60 kDa inner membrane insertion protein [Streptococcus suis
           89/1591]
 gi|330833337|ref|YP_004402162.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3]
 gi|223897601|gb|EEF63988.1| 60 kDa inner membrane insertion protein [Streptococcus suis
           89/1591]
 gi|329307560|gb|AEB81976.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3]
          Length = 304

 Score =  103 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 99/253 (39%), Gaps = 40/253 (15%)

Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKNIQ 393
           + ++ +PM  L+ +F  +    FG+AI++ T+ V+ +        + K  + +  M  ++
Sbjct: 37  WDWLGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYLK 96

Query: 394 PKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
           P +  ++E+ K +  Q  Q    +      K + ++ L   GC P+L+Q+P F AIY   
Sbjct: 97  PILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFAA 156

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
                 RH P       L                  +       I  ++  +  + Q  +
Sbjct: 157 ------RHTPGISEATFLG-----------------INLGSTSLILTVVAGILYYAQSLL 193

Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                D+ Q   +  M    P++ +      PAG+ +YW    +  I+QQA+       +
Sbjct: 194 MQVGMDEEQKKQMKTMALMNPIMIMMFSFGSPAGVTLYWVVGGLFGILQQAITN--FILK 251

Query: 564 IGLIDRLRSTFSK 576
             +  ++   F  
Sbjct: 252 PRIRKQVEEEFKN 264


>gi|188588551|ref|YP_001922719.1| putative inner membrane protein translocase component YidC
           [Clostridium botulinum E3 str. Alaska E43]
 gi|188498832|gb|ACD51968.1| putative sporulation protein/membrane protein insertase, OxaA
           family [Clostridium botulinum E3 str. Alaska E43]
          Length = 259

 Score =  103 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 18/230 (7%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            FE +I +    F     F+L     ++  ++ +AI++ T+ ++LL  PL  K   ST  
Sbjct: 1   MFEKIIQFMANIFNYLHDFILNLGVSDVGLSYVLAILIFTLMIRLLILPLNIKAAKSTQK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QP++ +L+EK+K +P + L + M + YK ++++   GC P LL +P+  A+Y V  
Sbjct: 61  MQAVQPQMKKLQEKYKGNPEK-LNEEMRKFYKENDVSLTGGCLPSLLPLPILMALYYVFF 119

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
               M  A  + WIKDL A D T I  +   +  YLP                ++  K +
Sbjct: 120 RIEGMNGAS-FLWIKDLGARDTTMILPVLAAISTYLPS---------------YLMTKAT 163

Query: 509 PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           P          +   M ++  F   +F + L++YW   NVI  +Q   + 
Sbjct: 164 PMDDSPMNMGTMSLVMALMMGFMSINFKSILVLYWIIGNVIQTIQTYFLN 213


>gi|308235529|ref|ZP_07666266.1| membrane protein insertase, YidC/Oxa1 family [Gardnerella vaginalis
           ATCC 14018]
 gi|311114011|ref|YP_003985232.1| membrane protein OxaA [Gardnerella vaginalis ATCC 14019]
 gi|310945505|gb|ADP38209.1| membrane protein OxaA [Gardnerella vaginalis ATCC 14019]
          Length = 335

 Score =  103 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 109/256 (42%), Gaps = 21/256 (8%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            + +            +               ++     +  ++ ++I+   + V    F
Sbjct: 8   LLDNGIWGWFYKILTPVEWLMTQVMSLFHKLFVLIGMNEIGFSWVLSIVFLVLVVHACIF 67

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWP 432
           P   K      NM+ I PK+ ++++K+K        + +Q+ M++LY+ +N NP   C P
Sbjct: 68  PAFIKSIKGMRNMQAIAPKMKKIQQKYKGKSDPASKEAMQREMMKLYQENNANPAGSCLP 127

Query: 433 ILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL------P 485
           +++Q P F +I+  +S+     R         D+A A       +FG+            
Sbjct: 128 MMIQGPAFMSIWYTLSVIPFIARGKHTALGAFDVATAQQFVKTHVFGVGVSDTFMTVQAG 187

Query: 486 GFMHVGIWPIIMSLSMFIQM----KMSPPPADK------GQAMILNWMPVVFVFALSSFP 535
           G + + I+ I+M  +M+       + + PP  K       Q +++   P+++VF+  + P
Sbjct: 188 GKVVIVIFVILMCAAMWYMQFNNIRKNLPPESKQGPQYTMQKLMMWGFPLIYVFSAFALP 247

Query: 536 AGLIIYWSWSNVISIV 551
             +++YW  +N+++++
Sbjct: 248 FAMLVYWLVNNIMNML 263


>gi|227513522|ref|ZP_03943571.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           buchneri ATCC 11577]
 gi|227524665|ref|ZP_03954714.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           hilgardii ATCC 8290]
 gi|227083395|gb|EEI18707.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           buchneri ATCC 11577]
 gi|227088149|gb|EEI23461.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           hilgardii ATCC 8290]
          Length = 343

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 103/255 (40%), Gaps = 40/255 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           + ++A+P   +M     +VG++G AI++ TV V++   P+  +Q  S+   +     I  
Sbjct: 37  YDYLARPAQSIMEAIAQIVGSYGWAIVVLTVIVRMFLLPIMVRQMKSSTIQQERMQMIRP 96

Query: 399 LREKFKQS--------PPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVIS 448
              + +Q               +AM+ LY+ +NI+     GC P+++Q+P+F A+Y  I 
Sbjct: 97  QMRELQQRQKAAKTTEEQTAASQAMMALYRQNNISMTGGIGCLPLIIQMPIFTALYAAIR 156

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
            S E+ H                   T+F  +      ++      ++  LS  +Q  + 
Sbjct: 157 YSPELSH-------------------TVFMGIRLGQSSWL----LAVLSFLSYLLQGYLM 193

Query: 509 PPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
                K Q      ++   P++ +    S PAGL IY+    + + +Q  ++        
Sbjct: 194 MLGTPKAQKKQMGAMMLMSPIMILLFTISAPAGLGIYFFIGGLFACLQTIIMN---LYRP 250

Query: 565 GLIDRLRSTFSKNYN 579
           G+  ++         
Sbjct: 251 GIRKKIAKEMEGKKP 265


>gi|222153767|ref|YP_002562944.1| membrane protein OxaA 1 [Streptococcus uberis 0140J]
 gi|222114580|emb|CAR43555.1| membrane protein OxaA 1 precursor [Streptococcus uberis 0140J]
          Length = 270

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 52/251 (20%), Positives = 104/251 (41%), Gaps = 27/251 (10%)

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
           K    +       A  R  +       +      F     + +  G+ GI I+L T+ ++
Sbjct: 6   KIAALLPMLTLLAACSRGNVSAQSSNGWDQLVYFFAKSVQWLSFNGSIGIGIILFTLLIR 65

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAG 429
           +L  PL   Q  S+  M++IQP++ +L+ K+          L +    LYK H +NP A 
Sbjct: 66  ILLMPLFNMQMKSSQKMQDIQPELKKLQMKYPGKDTESRMALAEESQALYKAHGVNPYAS 125

Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489
             P+L+Q+PV  A+++ ++    ++    + W+  LA  DP                   
Sbjct: 126 MLPLLIQMPVMIALFQALTRVPFLK-TGTFMWVS-LAQHDPYF----------------- 166

Query: 490 VGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546
             I P++ ++  F+   ++   A   +    ++   MP++         +G+++YW  SN
Sbjct: 167 --ILPVLAAVLTFLSTWLTNLAAREKNVVMTIMTYMMPIMIFLMGFKLASGVVLYWVVSN 224

Query: 547 VISIVQQAVIM 557
              + Q  ++ 
Sbjct: 225 AFQVFQLLLLN 235


>gi|110740108|dbj|BAF01955.1| chloroplast membrane protein [Arabidopsis thaliana]
          Length = 201

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 9/113 (7%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFVFALS 532
           G  P      +   + P+++  S ++ M++  PP   D  Q     +  ++P++  +   
Sbjct: 8   GHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFAL 67

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581
           S P+GL IYW  +NV+S  QQ  + K+ GA+  + +     + +  +K   +Q
Sbjct: 68  SVPSGLSIYWLTNNVLSTAQQVYLRKLGGAKPNMDENASKIISAGRAKRSIAQ 120


>gi|289579532|ref|YP_003478159.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter
           italicus Ab9]
 gi|289529245|gb|ADD03597.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter
           italicus Ab9]
          Length = 206

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 23/220 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              IA  +  L+ + Y  VGN+G AI++ T+ +++L  P   +Q  +   MK IQP I E
Sbjct: 1   MATIAMYLGELLEFIYKYVGNYGTAIIIFTILIRILLLPFYVQQMNTMKKMKEIQPLIQE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L++K+ +  PQ L    ++LY+   +NP  GC P+LL + + + ++ ++        A  
Sbjct: 61  LQKKYAK-DPQKLNIETMKLYQEKKVNPFGGCLPMLLPLIILWPLFAMLRTYPAFSTAS- 118

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W+  LA  DP                     I PI+ +++ +I   M     DK Q  
Sbjct: 119 FLWMHSLAERDPYY-------------------IIPILATVTTYISSAM--VATDKSQNS 157

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +   M +   +   S PAG+ IYW  SN+  IVQQ + M+
Sbjct: 158 MNIIMSIFIGWITVSLPAGIGIYWVTSNIFQIVQQYIFMR 197


>gi|253681205|ref|ZP_04862003.1| OxaA [Clostridium botulinum D str. 1873]
 gi|253562443|gb|EES91894.1| OxaA [Clostridium botulinum D str. 1873]
          Length = 247

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 8/233 (3%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +  F       + + F N   ++G+ I++ T+ ++++ FPL  KQ  S   M  IQP+I 
Sbjct: 22  FVKFFQVIHSWVHTLFTNPNISYGLTIIVLTLIIRIVLFPLNYKQIKSQVAMTEIQPEIK 81

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +L+EK+K   PQ  Q+ M++LYK + +NPL GC P+LLQ P+  A++ V +     +  P
Sbjct: 82  KLQEKYKN-DPQRQQQEMMKLYKEYGVNPLGGCLPLLLQWPILIALFYVFNNL--SKIEP 138

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
               +  L       +     + P Y   ++   +  ++   S  I    +   A   Q 
Sbjct: 139 SIVNVTFLGVK----LMEPAILKPEYWYTWILPIVSALLTYFSTVIMTSKNSDSAQVKQT 194

Query: 518 MILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            +++ +M +  V+    FP  L++YW  +++  I Q  +  +    +  L+  
Sbjct: 195 KMMSGFMTLFVVYMSFKFPTALVLYWITNSLFQIGQTVITQRSQQKKKELVQE 247


>gi|255994567|ref|ZP_05427702.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium saphenum
           ATCC 49989]
 gi|255993280|gb|EEU03369.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium saphenum
           ATCC 49989]
          Length = 240

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 42/258 (16%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
             I  PM  ++S+ Y+ +GN+G+ ++L T+ VKL+ FPL K Q ++T  M  +QPK+ ++
Sbjct: 6   NLIVLPMGKILSFLYSFIGNYGVTLILLTLIVKLVTFPLYKSQMLNTLKMAELQPKMKDI 65

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS--------- 450
           + +F      +L   M +LYK    NP  GC P+L+Q+P+ F ++ ++            
Sbjct: 66  QARF-GHDKALLGAKMQELYKEEKYNPAGGCLPMLIQMPIIFGLFSLLRDPLSYISDQQL 124

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +   H P + WI DL+  D                      I PI+  ++ FI   +S  
Sbjct: 125 IFAVHEP-FLWIADLSHPDKW--------------------ILPILAGVATFISFSLSQQ 163

Query: 511 PADKGQA-------MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
                          ++ +  PV  V    SFPAGL IYW +      +Q  + + ++  
Sbjct: 164 AQMGTGQANPASGMKVMKYIFPVAIVLIGRSFPAGLAIYWFFG---QFIQIFISIHLNSV 220

Query: 563 EIGLIDRLRSTFSKNYNS 580
              +  +   +      +
Sbjct: 221 RKKMNQQKEKSKRMKKAA 238


>gi|242040481|ref|XP_002467635.1| hypothetical protein SORBIDRAFT_01g031260 [Sorghum bicolor]
 gi|241921489|gb|EER94633.1| hypothetical protein SORBIDRAFT_01g031260 [Sorghum bicolor]
          Length = 420

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 94/246 (38%), Gaps = 35/246 (14%)

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            P          F  +A    ++ +       N+   I LTT+ ++    PL   Q  +T
Sbjct: 117 FPGEVAAAAADSFPPVAALQHIIDAIHTFTGLNWWACIALTTLIIRSATIPLLVNQLKAT 176

Query: 387 ANMKNIQPKIDELREKF--KQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAI 443
             ++ I P+++ ++++            +A ++ L+K H ++P      +L+Q P+F + 
Sbjct: 177 TKLRAINPEMEAIKDQMNSMDPKSAQEGQAKMKALFKKHGVSPFTPMKGLLIQGPMFMSF 236

Query: 444 YKVISISLEMRHAPFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           Y  IS  +E    P +      W  DL   D                      + P++  
Sbjct: 237 YFAISNMVE--KVPSFKGGGALWFTDLTTPDSLY-------------------VLPVLTG 275

Query: 499 LSMFIQMKMS---PPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           L+  + ++++       +     +  +   M V+ V    +F   +  YW  SN+ +++ 
Sbjct: 276 LTFLVTVELNLQEGMEGNPMAGKMKTFSRGMAVLTVPFTMNFAKAIFCYWITSNIFTLLY 335

Query: 553 QAVIMK 558
             VI +
Sbjct: 336 GIVIRR 341


>gi|118466815|ref|YP_884420.1| inner membrane protein translocase component YidC [Mycobacterium
           avium 104]
 gi|118168102|gb|ABK68999.1| membrane protein OxaA [Mycobacterium avium 104]
          Length = 350

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 99/279 (35%), Gaps = 41/279 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            + +     +               +    + +++M     ++ L +    +Q  +T  M
Sbjct: 7   LDFVYYPVSWIMWVWYKLFAAMLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 66

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP+I  L++K+     Q +   M +L + H  NP+ GC P+L QIPVF  +Y V+  
Sbjct: 67  QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 125

Query: 450 ---SLEMRHAPFWGWIKD---------------------LAAADPTNIFTLFGILPFYL- 484
              +      P    +++                       A     +    G+  F   
Sbjct: 126 FNRTTGGFGQPHLSVVQNRLTGNYVFTPTDVGHFLDANLFGAPIGAFMTQRTGLDAFTYF 185

Query: 485 --PGFMHVGIWP--IIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWMPVVFVFA 530
             P  + VG  P  I+  ++ +   +      SP  A   Q  ++        P+  V  
Sbjct: 186 SRPAVIAVG-LPVMILAGVATYFNSRASVARQSPEAAANPQTAMMNKLALYVFPLGVVVG 244

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
               P  +I+YW  +N+ +  QQ  +  M   E     +
Sbjct: 245 GPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQ 283


>gi|198465469|ref|XP_001353642.2| GA19566 [Drosophila pseudoobscura pseudoobscura]
 gi|198150173|gb|EAL31156.2| GA19566 [Drosophila pseudoobscura pseudoobscura]
          Length = 438

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 85/211 (40%), Gaps = 38/211 (18%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQ 412
           +  AI + T+ V+ + FPL      ++A M N  P++  L+ K  ++             
Sbjct: 150 WWGAIAVGTLVVRTIIFPLVILAQRNSAKMNNNMPQMQLLQLKMTEARQSGNAIESARYA 209

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468
           + M+   +   +NPL      L Q P+F      + ++ +  ++        W +DL  A
Sbjct: 210 QEMMLFMRDKGVNPLKNMIVPLAQAPLFISFFMGLRQMANTPVDSMRDGGLWWFQDLTLA 269

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQAMILN 521
           DP                     I P+I S ++++         ++S    +     +L 
Sbjct: 270 DPFY-------------------ILPLITSATLYLTIEIGTDSARLSAANMNTM-KYVLR 309

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            +P+V      +FPA ++ YW+ SN IS+ Q
Sbjct: 310 ALPLVIFPFTMNFPAAILTYWACSNFISLGQ 340


>gi|183985455|ref|YP_001853746.1| transmembrane protein [Mycobacterium marinum M]
 gi|183178781|gb|ACC43891.1| conserved transmembrane protein [Mycobacterium marinum M]
          Length = 371

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 99/256 (38%), Gaps = 39/256 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +          +    +    + +++M     ++ L +    +Q  +T  M+ +QP+I  
Sbjct: 19  WIMWVWYKLFALVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKA 78

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS-------- 450
           L++K+     Q +   M +L + H  NP+ GC P+L QIPVF  +Y V+           
Sbjct: 79  LQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRSFNRTTGGFG 137

Query: 451 ------LEMRHAPFWGWIK-DLAAADPTNIFT------------LFGILPFYLPGFMHVG 491
                 +E R    + +   D+      N+F             L   + F  P  + VG
Sbjct: 138 QPHLSVVENRLTGNYVFTPTDVGHFLDANLFGAPIGASMTQRGGLDAFVDFSRPAVIAVG 197

Query: 492 I-WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVVFVFALSSFPAGLII 540
           +   ++  ++ +   + S         A+   AM+    L   P+  V      P  +I+
Sbjct: 198 VPVMVLAGVATYFNSRASVARQSAEAAANPQTAMMNKLALYVFPLGVVVGGPFLPLAIIL 257

Query: 541 YWSWSNVISIVQQAVI 556
           YW  +N+ +  QQ  +
Sbjct: 258 YWFSNNIWTFGQQHYV 273


>gi|194751063|ref|XP_001957846.1| GF23816 [Drosophila ananassae]
 gi|190625128|gb|EDV40652.1| GF23816 [Drosophila ananassae]
          Length = 448

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 94/254 (37%), Gaps = 39/254 (15%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            + +       P F  +   GW         M   +    +  +  AI + T+ V+ + F
Sbjct: 117 ELVNLVNASGEPTFASIGLGGWSPVGIVQNCMEFLHCTWELP-WWGAIAVGTLVVRTIIF 175

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAG 429
           PL      ++A M N  P++  L+ K  ++             + M+   +   +NPL  
Sbjct: 176 PLVILAQRNSAKMNNNMPQMQLLQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKN 235

Query: 430 CWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
               L Q P+F      + ++ +  ++        W  DL  ADP               
Sbjct: 236 MVVPLAQAPLFISFFMGLRQMANTPVDSMRDGGLFWFTDLTLADPLY------------- 282

Query: 486 GFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
                 + P+I S ++++         ++S    +     +L  +P+V      +FPA +
Sbjct: 283 ------LLPLITSATLYLTIEIGTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAI 335

Query: 539 IIYWSWSNVISIVQ 552
           + YW+ SN IS+ Q
Sbjct: 336 LTYWACSNFISLGQ 349


>gi|220930846|ref|YP_002507755.1| hypothetical protein Ccel_3488 [Clostridium cellulolyticum H10]
 gi|220001174|gb|ACL77775.1| 60 kDa inner membrane insertion protein [Clostridium cellulolyticum
           H10]
          Length = 281

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 58/278 (20%), Positives = 120/278 (43%), Gaps = 51/278 (18%)

Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
            F  + +P+   + + Y  +   N+G+A+++ T+ V+ +  PL  +QY S+A M+ +QP 
Sbjct: 1   MFDILIRPLGQFLYWIYKTIAFENYGLALIIFTIIVRSIMVPLTLRQYKSSAEMQKVQPL 60

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------- 447
           + E++ K+     + L + M++LY+ H INP  GC P+L+Q+P+  A+++ I        
Sbjct: 61  LQEIQRKYANDKAK-LNEEMMKLYQEHKINPAGGCLPLLIQMPILLALWQAITKPLKYML 119

Query: 448 --------SISLEM-------------------RHAPFWGWIKDLAAADPTNIFTLFGIL 480
                   ++++E                    R         ++          L  I 
Sbjct: 120 GFTATQLNNLAVESKIPINSAYSEINTITHFMSRGEGEKVGNLNMFFPSHGFGINLGDIP 179

Query: 481 PFYLPGFMHVGIWPIIMSLSM------FIQMKMSPP-------PADKGQAMILNWMPVVF 527
            ++    ++     +++ L +      ++ ++MS P        A+     ++   P++ 
Sbjct: 180 TWHFNEIVNNPKNAVLLLLPLIATLTTYLTVRMSMPKSKTTDKAANPMGNSMMYISPIMT 239

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           +     FPAGL +YW   NV +I QQ  + K    +  
Sbjct: 240 LIFSFQFPAGLALYWIAGNVFAIAQQYYVNKYVLNKKE 277


>gi|312133635|ref|YP_004000974.1| yidc2 [Bifidobacterium longum subsp. longum BBMN68]
 gi|311772893|gb|ADQ02381.1| YidC2 [Bifidobacterium longum subsp. longum BBMN68]
          Length = 335

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 104/248 (41%), Gaps = 22/248 (8%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
              +     +       F +M     +  ++ +AI++  + V+   FPL  KQ  S   M
Sbjct: 20  LTPVEWLQTWIMKIVHDFFVMLGVSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKM 79

Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + + PK+  ++ K+K    Q     + +  ++LY+ ++ NP   C P+L+Q PVF +++ 
Sbjct: 80  QALAPKMQRIQNKYKGKTDQASKEAMSRETMKLYQDNDANPAGSCLPMLIQGPVFMSMFY 139

Query: 446 VISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIM 497
            +S    +           D+A A       +FGI+            G   +GI+  +M
Sbjct: 140 TLSAIPYIANGKRDALGAFDVATAKQFTQTDVFGIVSVTDNFTSAAASGKAVIGIFVFLM 199

Query: 498 SLSMFIQM----KMSPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
              ++       K +   A         Q  +L   PV+++F+  + P  +++YW  +NV
Sbjct: 200 CFCLWFMQYFSMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGVAMPFAVLVYWLTNNV 259

Query: 548 ISIVQQAV 555
            ++ +   
Sbjct: 260 CNLCRTLW 267


>gi|302024343|ref|ZP_07249554.1| membrane protein OxaA 2 precursor [Streptococcus suis 05HAS68]
          Length = 249

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 81/233 (34%), Gaps = 35/233 (15%)

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ- 412
                   I  +L    +  L    + K  + +  M  ++P +  ++E+ K +  Q  Q 
Sbjct: 2   PRFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYLKPILGPIQERMKNASSQEEQL 61

Query: 413 ---KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
              +      K + ++ L   GC P+L+Q+P F AIY         RH P       L  
Sbjct: 62  AAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFAA------RHTPGISEATFLG- 114

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM---- 523
                           +       I  ++  +  + Q  +     D+ Q   +  M    
Sbjct: 115 ----------------INLGSTSLILTVVAGILYYAQSLLMQVGMDEEQKKQMKTMALMN 158

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
           P++ +      PAG+ +YW    +  I+QQA+       +  +  ++   F  
Sbjct: 159 PIMIMMFSFGSPAGVTLYWVVGGLFGILQQAITN--FILKPRIRKQVEEEFKN 209


>gi|227547516|ref|ZP_03977565.1| inner membrane insertion protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|227212031|gb|EEI79927.1| inner membrane insertion protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
          Length = 335

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 22/248 (8%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
              +     +       F +M     +  ++ +AI++  + V+   FPL  KQ  S   M
Sbjct: 20  LTPVEWLQTWIMKIVHDFFVMLGVSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKM 79

Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + + PK+  ++ K+K    Q     + + +++LY+ ++ NP   C P+L+Q PVF +++ 
Sbjct: 80  QALAPKMQRIQNKYKGKTDQASKEAMSREIMKLYQDNDANPAGSCLPMLIQGPVFMSMFY 139

Query: 446 VISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIM 497
            +S    +           D+A A       +FGI+            G   +GI+  +M
Sbjct: 140 TLSAIPYIANGKRDALGAFDVATAKQFTQTDVFGIVSVTDNFTSAAASGKAVIGIFVFLM 199

Query: 498 SLSMFIQM----KMSPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
              ++       K +   A         Q  +L   PV+++F+  + P  +++YW  +NV
Sbjct: 200 CFCLWFMQYFSMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGVAMPFAVLVYWLTNNV 259

Query: 548 ISIVQQAV 555
            ++ +   
Sbjct: 260 CNLCRTLW 267


>gi|21356443|ref|NP_648417.1| CG6404, isoform B [Drosophila melanogaster]
 gi|24662345|ref|NP_729634.1| CG6404, isoform A [Drosophila melanogaster]
 gi|5052482|gb|AAD38571.1|AF145596_1 BcDNA.GH02220 [Drosophila melanogaster]
 gi|23093704|gb|AAF50127.2| CG6404, isoform A [Drosophila melanogaster]
 gi|23093705|gb|AAN11911.1| CG6404, isoform B [Drosophila melanogaster]
 gi|220943722|gb|ACL84404.1| CG6404-PA [synthetic construct]
 gi|220953572|gb|ACL89329.1| CG6404-PA [synthetic construct]
          Length = 441

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 88/232 (37%), Gaps = 39/232 (16%)

Query: 340 YFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     +   + + +      +   I + T+ V+ + FPL      ++A M N  P++  
Sbjct: 131 WSPVGMVQNCLEFLHCTWDIPWWGTIAIGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQM 190

Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVI 447
           L+ K  ++             + M+   +   +NPL      L Q P+F      + ++ 
Sbjct: 191 LQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKNMVVPLAQAPLFISFFMGLRQMA 250

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504
           +  +E        W  DL  ADP                     + P+I S ++++    
Sbjct: 251 NAPVESMRDGGLFWFTDLTMADPFY-------------------LLPLITSATLYLTIEI 291

Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
                ++S    +     +L  +P+V      +FPA ++ YW+ SN IS+ Q
Sbjct: 292 GTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQ 342


>gi|224283948|ref|ZP_03647270.1| 60 kDa inner membrane insertion protein [Bifidobacterium bifidum
           NCIMB 41171]
          Length = 336

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/296 (17%), Positives = 110/296 (37%), Gaps = 34/296 (11%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +              L        +    F+ +     +  ++ +AI+   + V     
Sbjct: 8   LLDRGIWGWLYKLLTPLEWLMTQVMVLFHKFLTLLGMAPIGISWVLAIVFLVLVVHACIL 67

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWP 432
           P+  KQ  S   M+ +QPK+  ++ K+K    Q     + + M++LY+ ++ NP+  CW 
Sbjct: 68  PIYLKQMKSMRKMQALQPKMQHIQNKYKGKKDQASKEAMSREMMKLYQDNDANPMGSCWT 127

Query: 433 ILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL---- 484
            ++Q PVF  ++ ++     I+   R A       D A A       +FG+         
Sbjct: 128 AVIQGPVFMCMFYMLSAIPYIATGKRGA---LGAFDQATAKQFAQTRVFGVSVTDTFGTA 184

Query: 485 --PGFMHVGIWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALS 532
              G + +G + ++M   M+     +               K Q  +    P++++F+  
Sbjct: 185 NNSGKVVIGFFILLMCACMWYMQFNNMRKNLPKASMQGSTYKMQQAMTWGFPIMYIFSGI 244

Query: 533 SFPAGLIIYWSWSNVISIVQQAV-IMK------MHGAEIGLIDRLRSTFSKNYNSQ 581
            FP  +++YW  +N  ++ +    + K          E  + D  +    +    Q
Sbjct: 245 MFPFAVLVYWLTNNACNLARSLFQVYKFPTPGSRAAEEKEIRDHRQENARRAKAGQ 300


>gi|303233448|ref|ZP_07320116.1| membrane protein insertase, YidC/Oxa1 family [Atopobium vaginae
           PB189-T1-4]
 gi|302480456|gb|EFL43548.1| membrane protein insertase, YidC/Oxa1 family [Atopobium vaginae
           PB189-T1-4]
          Length = 253

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 53/236 (22%), Positives = 115/236 (48%), Gaps = 17/236 (7%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            +      +  ++       G++G+A+++ T+ ++++  PL  K   S+A M+ +QP++ 
Sbjct: 1   MWDIFITLLTQVLEGIEQFCGDWGLAVIILTLIIRVILIPLMTKSTESSARMQALQPQMQ 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
            +++K+   P   + + M + Y  H  N L GC P++LQ+PVFF ++ V S   +  +A 
Sbjct: 61  AIKDKYSDDPA-RMNEEMQKFYSEHKFNMLGGCLPMVLQMPVFFGLFTVASKIPQ--NAS 117

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           F+  +  ++ + P ++F   GI    +  F       ++ +++ FI M M+     + Q 
Sbjct: 118 FFSLLPTISLS-PADVFQQQGIQTAAIYIF-----LVVLFAVTTFIPMVMNLKNTSEQQR 171

Query: 518 M----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV----IMKMHGAEIG 565
                +   M    ++   + P  +++Y++ S++  IVQQ +    +MK    E  
Sbjct: 172 SQTITMGVVMSCFMLWFGWTVPTAVLLYYNTSSLWQIVQQKLVTDRVMKRVKEETE 227


>gi|195127181|ref|XP_002008047.1| GI12049 [Drosophila mojavensis]
 gi|193919656|gb|EDW18523.1| GI12049 [Drosophila mojavensis]
          Length = 423

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 38/215 (17%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PP 408
               +  AI + T+ V+ L FPL      ++A M N  P++  L+ K  ++         
Sbjct: 117 WDIPWWGAIAIGTLCVRTLIFPLVILAQRNSAKMSNNMPQMQVLQLKMTEARQSGNAIES 176

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKD 464
               + M+   +   +NPL      L Q P+F      + ++ +  +E        W  D
Sbjct: 177 ARYAQEMMLFMREKGVNPLKNMIVPLAQAPLFISFFMGLRQMANTPVESMRDGGLFWFTD 236

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQA 517
           L  ADP                     + P+I S ++++         ++S    +    
Sbjct: 237 LTLADPYY-------------------LLPVITSATLYLTIELGTDSARLSAANMNTM-K 276

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            +L  +P+V      +FPA ++ YW+ SN IS+ Q
Sbjct: 277 YVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQ 311


>gi|262066864|ref|ZP_06026476.1| stage III sporulation protein J [Fusobacterium periodonticum ATCC
           33693]
 gi|291379415|gb|EFE86933.1| stage III sporulation protein J [Fusobacterium periodonticum ATCC
           33693]
          Length = 206

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 23/209 (11%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
                VGNFG++I++ T+ +K+   PL  KQ  S   MK +QP+ID+++EK+     Q+L
Sbjct: 18  NTDKYVGNFGVSIIIVTILIKIALLPLTLKQDKSMKEMKKLQPEIDKIKEKYANDK-QML 76

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
               ++LYK H +NPL GC P+LLQ+P+ FA++ V+   + +     + W+K L+  DP 
Sbjct: 77  NIKTMELYKEHKVNPLGGCLPLLLQLPILFALFGVLRSGI-IPADSSFLWLK-LSEPDPF 134

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-ILNWMPVVFVFA 530
                               I P++     F+Q K+        Q   ++   P++ +  
Sbjct: 135 Y-------------------ILPVLNGAVSFLQQKLMGSADSNPQMKNMMYIFPIMMIMI 175

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
               P+GL +YW  S+++++VQQ  IMK 
Sbjct: 176 SYKMPSGLQVYWLTSSILAVVQQYFIMKK 204


>gi|303240053|ref|ZP_07326574.1| membrane protein insertase, YidC/Oxa1 family [Acetivibrio
           cellulolyticus CD2]
 gi|302592322|gb|EFL62049.1| membrane protein insertase, YidC/Oxa1 family [Acetivibrio
           cellulolyticus CD2]
          Length = 285

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 50/265 (18%)

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           +   G +G+AI++ TVF+KL+  PL  KQ+ S A ++ IQP I EL+ K+K    + L +
Sbjct: 22  HMSFGRYGLAIIIFTVFIKLVLLPLTVKQFKSNAQLQEIQPLIQELQRKYKNDNNK-LNE 80

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL--AAADPT 471
            M+++Y  H  NP +GC P+L+Q+P+ F++  VI   L          I +L  A  +  
Sbjct: 81  EMMKVYAEHKYNPASGCLPLLVQLPILFSLIYVIGQPLTYMLNYSTADINNLLNAVPEAM 140

Query: 472 NIFTLF---------------------GILPFYLPGFMH---------VGIWPIIMSLSM 501
            I   +                     G++P + P  +          + + PI+  ++ 
Sbjct: 141 KIKGFYAQIGAVNFHNILNMKFLGLDLGLVPTWRPNVLFGPEMGRYLPLILIPILSVITT 200

Query: 502 FIQMKMSPPPADK-----------------GQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
           F+  K+      K                     +    P++ ++    FPAGL +YW  
Sbjct: 201 FLSNKLMTAATMKKNNNSSGNDSAQDAAAAMTKNMTLIAPIMTLWVSFQFPAGLGLYWLV 260

Query: 545 SNVISIVQQAVIMKMHGAEIGLIDR 569
            N+  I QQ  + K    +  + D+
Sbjct: 261 GNIFQIFQQLYLNKYVINKKEVKDK 285


>gi|150019909|ref|YP_001312163.1| inner membrane protein translocase component YidC [Clostridium
           beijerinckii NCIMB 8052]
 gi|149906374|gb|ABR37207.1| 60 kDa inner membrane insertion protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 254

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 18/232 (7%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            F+ ++++    F +   F++     ++  ++ +AI + T+ +++L  P   K   S+  
Sbjct: 1   MFQAIVNFMKGIFDSLHDFIVSMGISDVGLSYVLAIFIFTLIIRILILPFNIKAAKSSQG 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ IQP++ +L+ K+K   PQ L    ++LYK +N++   GC P LL +P+  A+Y V  
Sbjct: 61  MQKIQPEVKKLQAKYKD-DPQKLNTETMRLYKENNVSVAGGCLPSLLPLPILMALYWVFM 119

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
               +  A  + WI DL A D   I  +   L  Y+P                ++  K +
Sbjct: 120 GIQGIEGAS-FLWIHDLFAPDKYYILPVLAALSTYIPS---------------YLMSKST 163

Query: 509 PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           P          +   M  +      +F + L++YW   N+I  +Q   +   
Sbjct: 164 PSQPGGMNMGSMNLVMAGMMGVMSLNFKSILVLYWIIGNLIQTIQTYFLNYR 215


>gi|289550293|ref|YP_003471197.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis
           HKU09-01]
 gi|315660247|ref|ZP_07913102.1| SpoJ family protein [Staphylococcus lugdunensis M23590]
 gi|289179825|gb|ADC87070.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis
           HKU09-01]
 gi|315494674|gb|EFU83014.1| SpoJ family protein [Staphylococcus lugdunensis M23590]
          Length = 291

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 104/259 (40%), Gaps = 35/259 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ-- 393
           ++     PM  ++ +  + + N  +G+AI++  + ++++  P     Y ++  M+     
Sbjct: 32  FYNTFVDPMEKILHWLGSGIFNNDYGLAIIVLVLVIRIVLLPFMLSNYKNSHMMREKMKV 91

Query: 394 ------PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + M+Q+YK ++INP+A   GC P+L+Q+P+   +Y
Sbjct: 92  AKPEVSEVQEKVKRARTQEEKMAANQEMMQVYKKYDINPMASMLGCLPVLIQMPIVMGLY 151

Query: 445 KVISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   +   + H P + W  +L   D                      I  ++  +  +
Sbjct: 152 FVLRYQIGGGITHHPHFLWF-NLVKPD-----------------IWITAIAGVLYFIQSY 193

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG- 561
           I  K  P    +   M++   P++ ++      A L +YWS S    IVQ       +  
Sbjct: 194 ISTKTMPDEQRQMAYMMMIVSPIMIIWISYQSAAALGLYWSVSAAFLIVQTYFANMYYSK 253

Query: 562 -AEIGLIDRLRSTFSKNYN 579
            A+  +   ++    +   
Sbjct: 254 RAKEEVAPMIKQYEKEKNQ 272


>gi|311065163|ref|YP_003971889.1| inner membrane insertion protein [Bifidobacterium bifidum PRL2010]
 gi|310867483|gb|ADP36852.1| Inner membrane insertion protein [Bifidobacterium bifidum PRL2010]
          Length = 309

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 105/263 (39%), Gaps = 34/263 (12%)

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           +     +  ++ +AI+   + V     P+  KQ  S   M+ +QPK+  ++ K+K    Q
Sbjct: 14  LLGMAPIGISWVLAIVFLVLVVHACILPIYLKQMKSMRKMQALQPKMQHIQNKYKGKKDQ 73

Query: 410 V----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI----SISLEMRHAPFWGW 461
                + + M++LY+ ++ NP+  CW  ++Q PVF  ++ ++     I+   R A     
Sbjct: 74  ASKEAMSREMMKLYQDNDANPMGSCWTAVIQGPVFMCMFYMLSAIPYIATGKRGA---LG 130

Query: 462 IKDLAAADPTNIFTLFGILPFYL------PGFMHVGIWPIIMSLSMFIQMKMSP------ 509
             D A A       +FG+            G + +G + ++M   M+     +       
Sbjct: 131 AFDQATAKQFAQTRVFGVSVTDTFGTANNSGKVVIGFFILLMCACMWYMQFNNMRKNLPK 190

Query: 510 ----PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV-IMK------ 558
                   K Q  +    P++++F+   FP  +++YW  +N  ++ +    + K      
Sbjct: 191 ASMQGSTYKMQQAMTWGFPIMYIFSGIMFPFAVLVYWLTNNACNLARSLFQVYKFPTPGS 250

Query: 559 MHGAEIGLIDRLRSTFSKNYNSQ 581
               E  + D  +    +    Q
Sbjct: 251 RAAEEKEIRDHRQENARRAKAGQ 273


>gi|260834921|ref|XP_002612458.1| hypothetical protein BRAFLDRAFT_214259 [Branchiostoma floridae]
 gi|229297835|gb|EEN68467.1| hypothetical protein BRAFLDRAFT_214259 [Branchiostoma floridae]
          Length = 383

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 92/266 (34%), Gaps = 45/266 (16%)

Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371
                 +    +    P     +  G +  I      +  +   L   +  +I+  T+  
Sbjct: 42  PTAHDIMQAAAETGVDPSLTE-LGLGGWSPICLLQSSIDMFHSTLHLPWWASIVCCTLLA 100

Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV-------LQKAMIQLYKTHNI 424
           + L FPL  K   +  N+ N+ P+I ++ EK  ++               +    K H +
Sbjct: 101 RSLMFPLIVKGQKNAINLNNVMPQIQKMNEKINEARTMGNKFEVAHQTAELQAFMKKHGV 160

Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF----WGWIKDLAAADPTNIFTLFGIL 480
           NPL      L+Q+PVF + +  +     +           W  DL A+DP          
Sbjct: 161 NPLKNFLVPLVQMPVFISFFVGLRRMATLPIMSMATGGIFWFTDLTASDPYF-------- 212

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPADKGQAMILNWMPVVFVFALSSFP 535
                      I P++ S++M   +++        P  K    ++  + ++ +   +SFP
Sbjct: 213 -----------ILPVMTSITMLTIIELGSELGVENPQMKMMKNVMRVVSLMILPLTASFP 261

Query: 536 ---------AGLIIYWSWSNVISIVQ 552
                      +  YW  SN  +I Q
Sbjct: 262 THSFPKVYCIAIFTYWMTSNTFTIAQ 287


>gi|322378154|ref|ZP_08052639.1| SpoIIIJ family protein [Streptococcus sp. M334]
 gi|321280884|gb|EFX57899.1| SpoIIIJ family protein [Streptococcus sp. M334]
          Length = 276

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 101/233 (43%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  D   F+      F  +  F +   + G+ I+L TV ++ L  P+ + Q V++  M+
Sbjct: 31  DITADSADFWSKFVYFFAEIIRFLSFDISIGVGIILFTVLIRTLLLPVFQVQMVASRKMQ 90

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 91  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRHSDSLWPILIQMPVILALFQAL 150

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI                     L G     + PI+ ++  F+   +
Sbjct: 151 SR-VDFLKTGHFLWIN--------------------LGGVDTTLVLPILAAVFTFLSTWL 189

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P+G+ +YW+ SN   ++Q   + 
Sbjct: 190 SNKALSERNGATTAMMYGIPVLIFVFGVYAPSGVALYWAVSNAYQVLQTYFLN 242


>gi|301121274|ref|XP_002908364.1| mitochondrial inner membrane protein OXA1 [Phytophthora infestans
           T30-4]
 gi|262103395|gb|EEY61447.1| mitochondrial inner membrane protein OXA1 [Phytophthora infestans
           T30-4]
          Length = 371

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 36/251 (14%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANM 389
           +        Y ++      +   ++  G      I+ TTV V+ +FFP+      + A M
Sbjct: 61  DFASVSDLGYSLSDMAIRSLDVIHSTTGLPWWATIIATTVAVRTVFFPVTVISMRNAAKM 120

Query: 390 KNIQPKIDELREKFKQSPPQ------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
           K  QP +++L+ +   +P Q        Q     L K H++NP       L QIPVF   
Sbjct: 121 KLFQPDMEKLKAQMDANPTQSPESTKEFQTKYKALMKKHDVNPFKSVLTPLSQIPVFLGF 180

Query: 444 YKVIS----ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           +  +        E  H    GW+ DL+ ADPT                      P+I S 
Sbjct: 181 FWGLQDISKYFPEYAHEG-IGWVPDLSVADPT-------------------LALPVISSA 220

Query: 500 SMFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
            M   +++            L +      ++ V    +F +G+ +YW  SN+ ++ Q A+
Sbjct: 221 LMAASVELGGDAMGGDMQRNLKFGMRCFALMMVPLTMNFQSGIFVYWVTSNMFTLTQTAL 280

Query: 556 IMKMHGAEIGL 566
            M+++  +  L
Sbjct: 281 -MRLNVVKRAL 290


>gi|297545654|ref|YP_003677956.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296843429|gb|ADH61945.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 206

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 23/220 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              IA  +  L+ + Y  VGN+GIAI++ T+ +++L  P   +Q  +   MK IQP I E
Sbjct: 1   MATIAMYLGELLEFIYKYVGNYGIAIIIFTILIRILLLPFYVQQMNTMKKMKEIQPLIQE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L++K+ +  PQ L    ++LY+   +NP  GC P+LL + + + ++ ++        A  
Sbjct: 61  LQKKYAK-DPQKLNIETMKLYQEKKVNPFGGCLPMLLPLIILWPLFAMLRTYPAFSTAS- 118

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           + W+  LA  DP                     I PI+ +++ +I   M     DK Q  
Sbjct: 119 FLWMHSLAERDPYY-------------------IIPILATVTTYISSAM--VATDKSQNS 157

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +   M +   +   S PAG+ IYW  SN+  IVQQ + M+
Sbjct: 158 MNIMMSIFIGWITVSLPAGIGIYWVTSNIFQIVQQYIFMR 197


>gi|293336635|ref|NP_001168896.1| hypothetical protein LOC100382702 [Zea mays]
 gi|223973535|gb|ACN30955.1| unknown [Zea mays]
          Length = 423

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 95/247 (38%), Gaps = 37/247 (14%)

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            P          F  +A    ++ +       N+ + I LTT  +++   PL   Q  +T
Sbjct: 120 FPGEVAAAAADSFPPVAALQHIIDAIHTFTGLNWWVCIALTTFIIRIATVPLLVNQLKAT 179

Query: 387 ANMKNIQPKIDELREKF--KQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAI 443
             ++ I P+++ ++++            +A ++ L+K H ++PL     +L+Q P+F + 
Sbjct: 180 TKLRAINPEMEVIKDQMNSMDPKSVQEGQAKMKALFKKHGVSPLTPMKGLLIQGPIFMSF 239

Query: 444 YKVISISLEMRHAPFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           +  IS  +E    P +      W  DL   D                      I P++  
Sbjct: 240 FFAISNMVE--KVPSFKGGGTLWFTDLTTPDSLY-------------------ILPMLTG 278

Query: 499 LSMFIQMKMS---PPPADKGQAMILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIV 551
           L+    ++++       +      + +      V+ V    +F   +  YW+ SN+ +++
Sbjct: 279 LTFLATVELNLQEGMEGNPMAGK-MKYFSRGVAVLTVPFTMNFATAVFCYWTSSNIFTLL 337

Query: 552 QQAVIMK 558
              VI +
Sbjct: 338 YGLVIRR 344


>gi|195493250|ref|XP_002094335.1| GE20254 [Drosophila yakuba]
 gi|194180436|gb|EDW94047.1| GE20254 [Drosophila yakuba]
          Length = 441

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 88/232 (37%), Gaps = 39/232 (16%)

Query: 340 YFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     +   M + +      +   I + T+ V+ + FPL      ++A M N  P++  
Sbjct: 131 WSPVGMVQNCMEFLHCTWDIPWWGTIAIGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQM 190

Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVI 447
           L+ K  ++             + M+   +   +NPL      L Q P+F      + ++ 
Sbjct: 191 LQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKNMVVPLAQAPLFISFFMGLRQMA 250

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504
           +  +E        W  DL  ADP                     + P+I S ++++    
Sbjct: 251 NAPVESMRDGGLFWFTDLTLADPFY-------------------LLPMITSATLYLTIEI 291

Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
                ++S    +     +L  +P+V      +FPA ++ YW+ SN IS+ Q
Sbjct: 292 GTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQ 342


>gi|313141100|ref|ZP_07803293.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|313133610|gb|EFR51227.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 337

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 52/296 (17%), Positives = 110/296 (37%), Gaps = 34/296 (11%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +              L        +    F+ +     +  ++ +AI+   + V     
Sbjct: 9   LLDRGIWGWLYKLLTPLEWLMTQVMVLFHKFLTLLGMAPIGISWVLAIVFLVLVVHACIL 68

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWP 432
           P+  KQ  S   M+ +QPK+  ++ K+K    Q     + + M++LY+ ++ NP+  CW 
Sbjct: 69  PIYLKQMKSMRKMQALQPKMQHIQNKYKGKKDQASKEAMSREMMKLYQDNDANPMGSCWT 128

Query: 433 ILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL---- 484
            ++Q PVF  ++ ++     I+   R A       D A A       +FG+         
Sbjct: 129 AVIQGPVFMCMFYMLSAIPYIATGKRGA---LGAFDQATAKQFAQTRVFGVSVTDTFGTA 185

Query: 485 --PGFMHVGIWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALS 532
              G + +G + ++M   M+     +               K Q  +    P++++F+  
Sbjct: 186 NNSGKVVIGFFILLMCACMWYMQFNNMRKNLPKASMQGSTYKMQQAMTWGFPIMYIFSGI 245

Query: 533 SFPAGLIIYWSWSNVISIVQQAV-IMK------MHGAEIGLIDRLRSTFSKNYNSQ 581
            FP  +++YW  +N  ++ +    + K          E  + D  +    +    Q
Sbjct: 246 MFPFAVLVYWLTNNACNLARSLFQVYKFPTPGSRAAEEKEIRDHRQENARRAKAGQ 301


>gi|195589346|ref|XP_002084413.1| GD12846 [Drosophila simulans]
 gi|194196422|gb|EDX09998.1| GD12846 [Drosophila simulans]
          Length = 414

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 86/265 (32%), Gaps = 35/265 (13%)

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
             +            E   +         P  + L           P    +++     G
Sbjct: 75  SATKGEEFMQAVPKTELVDLPDIPAAPVPPPTDGLNVMDVMNAAGDPPSPPLAWAAGRRG 134

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           +    I    +  +      + K   +   M+ +Q K+ E R+           + M+  
Sbjct: 135 HVRTIIFPLVILAQ----RNSAKMNNNMPQMQMLQLKMTEARQSGNAIESARYAQEMMLF 190

Query: 419 YKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
            +   +NPL      L Q P+F      + ++ +  +E        W  DL  ADP    
Sbjct: 191 MREKGVNPLKNMVVPLAQAPLFISFFMGLRQMANAPVESMRDGGLFWFTDLTMADPYY-- 248

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQAMILNWMPVVF 527
                            + P+I S ++++         ++S    +     +L  +P+V 
Sbjct: 249 -----------------LLPLITSATLYLTIEIGTDSARLSAANMNTM-KYVLRALPIVI 290

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQ 552
                +FPA ++ YW+ SN IS+ Q
Sbjct: 291 FPFTMNFPAAILTYWACSNFISLGQ 315


>gi|328706364|ref|XP_001946799.2| PREDICTED: mitochondrial inner membrane protein OXA1L-like
           [Acyrthosiphon pisum]
          Length = 423

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 86/237 (36%), Gaps = 31/237 (13%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ-------SPPQVLQ 412
           +  AI+  T  ++LL FPL       TA M N  P+I   +EK  +              
Sbjct: 145 WWGAIIAGTTILRLLVFPLVVTSQRHTARMNNNMPQIQAYQEKMTEARLHGNPYEMARAS 204

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF----WGWIKDLAAA 468
           + ++   KT+ +NPL G     +Q P+F +++  +     +    F      W  D+   
Sbjct: 205 QELMLFMKTNQVNPLKGMILPAIQFPIFLSMFLGLRGMAMLPLESFKYGGLWWFTDITLP 264

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW----MP 524
           D   I  +  ++   +   +   I  +  S   F                 L +    +P
Sbjct: 265 DQYFILPIVTVVTLGVTLELGADIGKLASSGVGF--------------GKYLKYGVRVLP 310

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +V    + +FP  + +YW+ +N IS+ Q   +     +     +       +   S+
Sbjct: 311 LVVFPFIVNFPCAVCLYWASTNFISLGQVLFL--KIPSVRNYFNIEEKRIVEKPKSK 365


>gi|294790220|ref|ZP_06755378.1| membrane protein OxaA [Scardovia inopinata F0304]
 gi|294458117|gb|EFG26470.1| membrane protein OxaA [Scardovia inopinata F0304]
          Length = 330

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 17/198 (8%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434
           F           A    +Q    + + K  Q+  + + +  ++LY+ ++ NP   C P L
Sbjct: 65  FIKQMVSMRNMQAMQPQLQKIQRKYKGKNDQASREAMSRETMKLYQENHANPAGSCLPAL 124

Query: 435 LQIPVFFAIYKVIS--ISLEMRHAPFWGWI-----KDLAAADPTNIFTLFGILPFYLPGF 487
           LQ PVF A++  +S    +        G        + A A   NI            G 
Sbjct: 125 LQSPVFMAMFYTLSAVTYIANGQRGPLGAFNKEVSTEFANAKVFNITLASMFNSEDTGGK 184

Query: 488 MHVGIWPIIMSLSMFIQMKMS---PPPADKGQ------AMILNW-MPVVFVFALSSFPAG 537
           + +GI+  +M L+MF     +     P    Q       M +++  P++++F+  +FP  
Sbjct: 185 ITIGIFVALMCLTMFYSQWHNVRRNMPRTSMQGNSYRTQMAMSFIFPIMYIFSGITFPFA 244

Query: 538 LIIYWSWSNVISIVQQAV 555
           +++YW  +N+ ++ Q   
Sbjct: 245 VLVYWLTNNMWTLGQTFW 262


>gi|328956995|ref|YP_004374381.1| membrane protein OxaA [Carnobacterium sp. 17-4]
 gi|328673319|gb|AEB29365.1| membrane protein OxaA [Carnobacterium sp. 17-4]
          Length = 307

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 107/257 (41%), Gaps = 39/257 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           + + + +     +++     L G++G+AI++ T+ V+L+  PL   Q   +   +     
Sbjct: 35  FIYEFLVVPTQQVIIQLAELLGGSYGLAIIVITLVVRLIILPLNLSQSKKSIIQQEKMAL 94

Query: 396 IDELREKFKQ--------SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           I    E+ ++              Q+ ++ LYK +N++ L   GC P+L+Q+P+F A+++
Sbjct: 95  IKPEMEEVQKKQKSAVTAEEKAAAQQELMSLYKDNNMSMLGGIGCLPLLIQMPIFTAMFQ 154

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
            I++S E+ ++ F G+    +  D                         I      F+Q 
Sbjct: 155 AINLSKEIGNSTFLGF----SLGDQN-------------------IALAIAAGAVYFVQS 191

Query: 506 KMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            +S       Q      ++   P++ +    + PAGL +YW    + ++ Q  +   ++ 
Sbjct: 192 YVSMIGLPDEQKKQMRTMMYVSPIMILMVSFTSPAGLGLYWFVGGIFAVFQTLITNFIY- 250

Query: 562 AEIGLIDRLRSTFSKNY 578
            +  +  ++ +   K  
Sbjct: 251 -KPRIKAQVEAEAKKRP 266


>gi|74228374|dbj|BAE24033.1| unnamed protein product [Mus musculus]
          Length = 433

 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 87/231 (37%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ Y + +L   +  AI   TV  + L FPL  K     A + +  P++ 
Sbjct: 113 SYTPVGLIQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHHHMPEMQ 172

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++     Q    +         K H+I  L      L Q PVF + +  +   
Sbjct: 173 KFSARIREAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREM 232

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + + P++++ +M+  ++
Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWCVLE 273

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         I+  MP+V +     FP+ + +YW  SNV S+ Q
Sbjct: 274 LGAETGVQSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324


>gi|309798989|ref|ZP_07693246.1| membrane protein OxaA 2 [Streptococcus infantis SK1302]
 gi|308117393|gb|EFO54812.1| membrane protein OxaA 2 [Streptococcus infantis SK1302]
          Length = 308

 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 95/256 (37%), Gaps = 32/256 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--------FPLAKKQYVSTA 387
           + W    A     +  +  +    FG+ I++ T+ V+LL         +          A
Sbjct: 36  FIWNTIGAPMAEAIKYFATDQGLGFGLGIIIVTIIVRLLILPLGIYQSWKATLHSEKMNA 95

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
               ++P    L+E   Q      Q+A+    K H I+     GC+PIL+Q+P F AIY 
Sbjct: 96  LKDVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILIQMPFFSAIYF 155

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  A + G                   +P   P  + V    I+  L   + +
Sbjct: 156 AAQHTEGVAQASYLG-------------------IPLGSPSMILVAFAGILYYLQSLLSL 196

Query: 506 KMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
                   + Q   + +M P++ V      PA + +YW     + I+QQ +I   +    
Sbjct: 197 HGVEDETQREQIKKMLYMSPLMIVVFSVFSPASVTLYWVVGGFMMILQQFIIN--YMVRP 254

Query: 565 GLIDRLRSTFSKNYNS 580
            L  ++R  F+KN   
Sbjct: 255 HLRKKVREEFAKNPPK 270


>gi|302768040|ref|XP_002967440.1| hypothetical protein SELMODRAFT_408456 [Selaginella moellendorffii]
 gi|300165431|gb|EFJ32039.1| hypothetical protein SELMODRAFT_408456 [Selaginella moellendorffii]
          Length = 411

 Score =  101 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 34/248 (13%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
              F + A   +++ +        + ++I LTTV V+ +  PL   Q  STA    ++P 
Sbjct: 138 SESFPWTAAVQYVIYATHVVTGLPWWLSIALTTVAVRTMVLPLVIYQVKSTARFALLRPD 197

Query: 396 IDELREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +++++   +Q+          ++ M +L+  H  +P       LLQ P+F   +  +   
Sbjct: 198 LEKIKVDMEQANYDPVALAENKRKMAELFAKHKTDPFTPLIGALLQGPIFMCFFFGLRTM 257

Query: 451 LE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
            E           W  DL   D                      I P I + +  I +++
Sbjct: 258 AEKMDSFKEGGAFWFTDLTTPDELF-------------------ILPFITTATFLITVEL 298

Query: 508 SP------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-MKMH 560
           +        P  K    IL  M V+F+   + FP  L  YW  SN+ S++Q A++  K  
Sbjct: 299 NAVDGMQGQPNQKTMKNILRGMGVLFLPLTAQFPKALFCYWVTSNLWSMLQGALLRNKKF 358

Query: 561 GAEIGLID 568
            A + + D
Sbjct: 359 KAYLDIPD 366


>gi|195376879|ref|XP_002047220.1| GJ13319 [Drosophila virilis]
 gi|194154378|gb|EDW69562.1| GJ13319 [Drosophila virilis]
          Length = 447

 Score =  101 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 55/309 (17%), Positives = 106/309 (34%), Gaps = 40/309 (12%)

Query: 263 FIPSKETSFHSQFKYLSDGHARY-QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321
            IP   ++     +Y S         + +   + +           +   + +  ++   
Sbjct: 61  LIPLYSSAAAGGLRYASSKTDVPPNMESAKELVDLPAIPDAPIPPAIQNISTDPESLMET 120

Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381
                 P F  +   GW         M   +    +  +   I + T+ V+ L FPL   
Sbjct: 121 IDMAGEPTFASIGLGGWSPVGMVQNCMEFLHCTWDIP-WWGTIAIGTIVVRTLIFPLVIL 179

Query: 382 QYVSTANMKNIQPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPIL 434
              ++A M N  P++  L+ K  ++             + M+   K   +NPL      L
Sbjct: 180 AQRNSAKMSNNMPQMQVLQLKMTEARQSGNAIESARYAQEMMLFMKEKGVNPLKNMIVPL 239

Query: 435 LQIP----VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
            Q P     F  + ++ +  +E        W  DL  ADP                    
Sbjct: 240 AQAPLFLSFFMGLRQMANTPVESMRDGGLFWFTDLTLADPFY------------------ 281

Query: 491 GIWPIIMSLSMFIQ-------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
            + P+I S ++++         ++S    +     +L  +P+V      +FPA ++ YW+
Sbjct: 282 -LLPVITSATLYLTIELGTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAILTYWA 339

Query: 544 WSNVISIVQ 552
            SN IS+ Q
Sbjct: 340 CSNFISLGQ 348


>gi|261338550|ref|ZP_05966434.1| membrane protein OxaA [Bifidobacterium gallicum DSM 20093]
 gi|270276572|gb|EFA22426.1| membrane protein OxaA [Bifidobacterium gallicum DSM 20093]
          Length = 337

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 112/270 (41%), Gaps = 31/270 (11%)

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
            +   +              +     +       F+       +  ++ ++I+   + V+
Sbjct: 3   NQEFLLDGGFWGWLYKLLTPIEWLMTWIMNLFHEFLTFIGMPQVGASWVLSIIFLVLVVQ 62

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLA 428
              FPL  KQ  S  +M+ IQPK+ +++ K+K    Q     +Q+ M++LY+ +++NP  
Sbjct: 63  ACIFPLFYKQMKSMRHMQAIQPKMMKIQNKYKGKTDQASKDAMQREMMKLYQDNHVNPAG 122

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT-------------NIFT 475
            C P+L+Q PVF  ++ V+S    +      G    L A D               ++ T
Sbjct: 123 SCLPMLIQGPVFMCMFYVLSAIPYI----AIGKRDTLGAFDQATAKQFADTHFFGISLQT 178

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPV 525
            F      + G + +G++   M   ++   + +              +  Q ++L   P+
Sbjct: 179 RFTDPSTMVGGKVVIGLFVAAMCFCLWFMQRYTMKHNTAAASMNKQTETMQKVMLWGFPI 238

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           +++F+  + P  +++YW  +N+ ++++   
Sbjct: 239 MYIFSGIAMPFAVLVYWLTNNICNLLRSVW 268


>gi|306821796|ref|ZP_07455391.1| stage III sporulation protein J [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550163|gb|EFM38159.1| stage III sporulation protein J [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 260

 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 29/238 (12%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              I+     ++ +FYN+  N+ ++I+L T+  K++  PL   Q  S + MK IQP+ID+
Sbjct: 1   MSQISYFFGHILEFFYNMTSNYALSIVLFTILTKIILLPLTISQMRSMSAMKLIQPEIDK 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           + +K+K    Q   + + +LYK +NINP AGC P+L+Q+P+  A+Y VI   ++   A  
Sbjct: 61  INKKYKN-DRQKQSELLSKLYKDNNINPAAGCLPLLIQLPILTAMYSVIREPIKYVFANN 119

Query: 459 ----------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
                     + W+K L   D  N+            G     I P++ ++  ++Q+KMS
Sbjct: 120 EALYKTADIGFFWVKHLTDVDKINV-----------GGMDLPFILPVMSAIFTYLQLKMS 168

Query: 509 PP-------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
                     A      +   MP++ +     FPAGL++YW    ++ I+QQ  I K 
Sbjct: 169 TARSSSDNEMAQGMSKNMSVMMPIMMLIWGVMFPAGLMLYWVTGTIVQIIQQYFIGKY 226


>gi|297585523|ref|YP_003701303.1| YidC/Oxa1 family membrane protein insertase [Bacillus
           selenitireducens MLS10]
 gi|297143980|gb|ADI00738.1| membrane protein insertase, YidC/Oxa1 family [Bacillus
           selenitireducens MLS10]
          Length = 286

 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 97/256 (37%), Gaps = 37/256 (14%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE- 398
           Y I    ++L  +     G++G +I++ TV ++    PL  KQ  +    K    +I   
Sbjct: 52  YVIYPFSYLLTFFADLFGGSYGASIIMMTVLIRTGLMPLMLKQQRTQLGTKKKMIEIQPE 111

Query: 399 -------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISI 449
                   ++K +    Q +Q+ M+ +Y  H  NPL   GC P+L+Q+P+    Y+ I  
Sbjct: 112 LEALKAKYKDKKEPEAQQEMQQEMMGIYTKHQFNPLTSMGCLPMLIQLPILIGFYQAIMR 171

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           + E+     + W   L   D                      I PI+ +L  FIQ ++S 
Sbjct: 172 TEEIASQ-QFLWFS-LGETD---------------------LILPILAALVYFIQFRISL 208

Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
              ++ Q   +       PV+         A L +YW+   +  I Q  V   M   +  
Sbjct: 209 FGMEETQKKQMAVFGYLTPVMMGGFSFMVSAALPLYWTIGGLFLIAQTLVFKWMFREKNR 268

Query: 566 LIDRLRSTFSKNYNSQ 581
            +        +   S+
Sbjct: 269 ELRERALMKKEAAPSE 284


>gi|148704412|gb|EDL36359.1| oxidase assembly 1-like, isoform CRA_c [Mus musculus]
          Length = 411

 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 81/216 (37%), Gaps = 35/216 (16%)

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
           F  L   +  AI   TV  + L FPL  K     A + N  P++ +   + +++     Q
Sbjct: 106 FTELGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQ 165

Query: 413 KAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGW 461
               +         K H+I  L      L Q PVF + +  +     +           W
Sbjct: 166 AEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVPSLQTGGLWW 225

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----Q 516
            +DL  +DP                   + + P++++ +M+  +++      +       
Sbjct: 226 FQDLTVSDP-------------------IYVLPLVVTATMWCVLELGAETGVQSNDLQFM 266

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
             I+  MP+V +     FP+ + +YW  SNV S+ Q
Sbjct: 267 RNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 302


>gi|148704413|gb|EDL36360.1| oxidase assembly 1-like, isoform CRA_d [Mus musculus]
          Length = 433

 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ Y + +L   +  AI   TV  + L FPL  K     A + N  P++ 
Sbjct: 113 SYTPVGLIQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQ 172

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++     Q    +         K H+I  L      L Q PVF + +  +   
Sbjct: 173 KFSARIREAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREM 232

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + + P++++ +M+  ++
Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWCVLE 273

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         I+  MP+V +     FP+ + +YW  SNV S+ Q
Sbjct: 274 LGAETGVQSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324


>gi|26346514|dbj|BAC36908.1| unnamed protein product [Mus musculus]
          Length = 433

 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ Y + +L   +  AI   TV  + L FPL  K     A + N  P++ 
Sbjct: 113 SYTPVGLIQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQ 172

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++     Q    +         K H+I  L      L Q PVF + +  +   
Sbjct: 173 KFSARIREAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREM 232

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + + P++++ +M+  ++
Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWCVLE 273

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         I+  MP+V +     FP+ + +YW  SNV S+ Q
Sbjct: 274 LDAETGVQSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324


>gi|58037139|ref|NP_081212.1| mitochondrial inner membrane protein OXA1L precursor [Mus musculus]
 gi|38372481|sp|Q8BGA9|OXA1L_MOUSE RecName: Full=Mitochondrial inner membrane protein OXA1L; AltName:
           Full=Oxidase assembly 1-like protein; Short=OXA1-like
           protein; Flags: Precursor
 gi|26336841|dbj|BAC32104.1| unnamed protein product [Mus musculus]
 gi|26342657|dbj|BAC34985.1| unnamed protein product [Mus musculus]
          Length = 433

 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ Y + +L   +  AI   TV  + L FPL  K     A + N  P++ 
Sbjct: 113 SYTPVGLIQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQ 172

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++     Q    +         K H+I  L      L Q PVF + +  +   
Sbjct: 173 KFSARIREAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREM 232

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + + P++++ +M+  ++
Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWCVLE 273

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         I+  MP+V +     FP+ + +YW  SNV S+ Q
Sbjct: 274 LGAETGVQSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324


>gi|184155770|ref|YP_001844110.1| hypothetical protein LAF_1294 [Lactobacillus fermentum IFO 3956]
 gi|260663514|ref|ZP_05864404.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN]
 gi|183227114|dbj|BAG27630.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
 gi|260552055|gb|EEX25108.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN]
          Length = 303

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 58/257 (22%), Positives = 102/257 (39%), Gaps = 41/257 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + ++AKPM  LM +F  L GN +G AI+   V V+L+  PL   Q   +  M+     + 
Sbjct: 36  YDYLAKPMQHLMEWFAGLFGNSYGWAIVALVVVVRLILLPLMMSQMKKSTMMQERMAMLQ 95

Query: 398 ELREKFKQSPPQVLQ--------KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
                 ++   Q           +AM+  YK +N++     GC P+L+Q+PVF A+Y  I
Sbjct: 96  PQMRALQERQKQAKTPEEQAAASQAMMSFYKDNNVSLTGGIGCLPLLIQLPVFSALYFAI 155

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S ++  A F+G                       L       +  I+  ++  IQ  +
Sbjct: 156 RYSPDLAQASFFG-----------------------LQLGQRSALLAIMAFVAYLIQGWL 192

Query: 508 SPPPADKGQAMIL----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           S     + Q   +       P++ +F      AGL +Y+    V +I+Q  ++       
Sbjct: 193 SMLGVPEDQKKQMRMALMMSPIMILFISWQASAGLGLYFFIGGVFAILQTWLVN---IYR 249

Query: 564 IGLIDRLRSTFSKNYNS 580
             +  ++     KN   
Sbjct: 250 PRIRKQIHEEMKKNPPK 266


>gi|226326925|ref|ZP_03802443.1| hypothetical protein PROPEN_00785 [Proteus penneri ATCC 35198]
 gi|225204762|gb|EEG87116.1| hypothetical protein PROPEN_00785 [Proteus penneri ATCC 35198]
          Length = 235

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 75/247 (30%), Gaps = 22/247 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      +      +  Q    P+    +        
Sbjct: 1   MDSQRNL-LFIALLFVSFLIWQQWEGDKVSQNTTTTAQVSQQADVPSSDSLAVTG----- 54

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              +   +  + +K   L   IN +G   D+ +L  Y  +++S +P   L   +  +  Y
Sbjct: 55  --NSNEQAKLITVKTDVLDLRINTQGGTIDEADLLAYPAELNSTTPFRLL--ETTPQFLY 110

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISLD 175
            A+   +      +   S  V++    + +      +L               +  I   
Sbjct: 111 QAQSGLIGPDGPDQK--SRPVYSADKNEFVLGENQDELRVPMTFVNEEGVKFIKTFILKK 168

Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFIAVLGDKSLV 230
             Y   +   + N +   +  +  G++ +         T ++ F +     A        
Sbjct: 169 GQYDISVDYKIENTTDKTLTMNFYGQLKQSVKLPESRDTGSSNFALHTYRGAAYSSDETN 228

Query: 231 EQKYSDI 237
            +K    
Sbjct: 229 YKKIQLW 235


>gi|323446883|gb|EGB02892.1| hypothetical protein AURANDRAFT_16967 [Aureococcus anophagefferens]
          Length = 196

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 27/214 (12%)

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           ++  + +VG++G+AI+L T+ +K + FPL  +Q  ST  M+ +QP I  ++ K+   P Q
Sbjct: 1   ITLIHGVVGSYGVAIVLFTLLLKAVTFPLNYQQIESTTKMQALQPAIKRIQAKYAADPQQ 60

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAA 468
           +    M +LY+ + +NPLAGC P L+QIP+F A+Y+ +   + E      + WI +L   
Sbjct: 61  MNIM-MAELYQENELNPLAGCLPALVQIPIFIALYRSLLSLAKEDLLEESFLWIPNLEGP 119

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK------GQAMILNW 522
                     +  F                 +  +Q     PPAD           +L +
Sbjct: 120 -VYGAQNADWLFKFDHAS-------------TTLLQ-----PPADPNNEAAQTSNQVLKY 160

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +P++  F   + PAGL IYW  +N+I+      I
Sbjct: 161 LPLMVGFFSLNVPAGLTIYWFCNNIITTASTLYI 194


>gi|168060995|ref|XP_001782477.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666030|gb|EDQ52696.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 419

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 86/244 (35%), Gaps = 34/244 (13%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK- 395
                 A    ++          + ++I  TTV ++++  P+   Q  +TA +  ++P+ 
Sbjct: 162 DCSAPTAALQHLIDFVHTQGGLPWWLSIAATTVGIRVMVLPVLVWQMKATARLTLMRPEL 221

Query: 396 ---IDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
               + ++E         + +  ++ L+  HN NP        +Q P+F + +  I    
Sbjct: 222 ERITNTIKESGYDPKVTEVNQKRMKELFAQHNTNPFMPLMGAFVQAPLFISFFFAIRNMA 281

Query: 452 E---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-- 506
           E           W  DL  ADP                     I PI+  L     ++  
Sbjct: 282 ERVPSFKEGGALWFTDLTTADPYF-------------------ILPIMSGLFTLATIELG 322

Query: 507 -MSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            M           +  +     V+ V   +SFP  L  YW  +NV S++Q  V+ +    
Sbjct: 323 AMDGMQGQPMIGKMKMFFRGFAVLIVPLTASFPKALFCYWLTTNVCSLIQTTVL-RQPAV 381

Query: 563 EIGL 566
           +  L
Sbjct: 382 KRTL 385


>gi|296875963|ref|ZP_06900022.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus
           parasanguinis ATCC 15912]
 gi|296433038|gb|EFH18826.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus
           parasanguinis ATCC 15912]
          Length = 305

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 83/229 (36%), Gaps = 36/229 (15%)

Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQL 418
             ++  + +  L    + K    +  M  ++P +  ++E+ K +  Q      Q+ ++  
Sbjct: 67  VTLIVRLIILPLGLYQSWKATYQSEKMNYLKPILGPIQERMKNASTQEEKLLAQQELMAA 126

Query: 419 YKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            + + ++     GC P+L+Q+P F A++     +  +  +                    
Sbjct: 127 QRENGVSMFGGVGCLPLLIQMPFFSALFFAAQHTKGVAESS------------------- 167

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL----NWMPVVFVFAL 531
           F  +    P  +   I  ++     +IQ  +S     D+ Q   +       P++     
Sbjct: 168 FLGIALGKPSLLLTAIVAVLY----YIQSMLSLHGIEDETQKESMRKASLMSPIMIGVFS 223

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
               AG+ +YW    VI I+QQ VI   +     L  R+   +  N   
Sbjct: 224 LISSAGVTLYWVVGGVIQIIQQFVIN--YLIRPNLRKRVAEEYKNNPPK 270


>gi|326383905|ref|ZP_08205589.1| putative inner membrane protein translocase component YidC
           [Gordonia neofelifaecis NRRL B-59395]
 gi|326197364|gb|EGD54554.1| putative inner membrane protein translocase component YidC
           [Gordonia neofelifaecis NRRL B-59395]
          Length = 384

 Score =  100 bits (248), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 105/283 (37%), Gaps = 65/283 (22%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN------------FGIAIMLTTVFVKLLFFPLAKKQYVS 385
              FI  P+  +M  ++ L  +            + ++++     ++ + +    KQ  +
Sbjct: 1   MLNFIYYPVSWIMWVWHWLFDSVMPNSPGWDGIAWALSVVFLVFTLRAILYKPFVKQIRT 60

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           T  M+ I P++  +R+K+     ++  + M +L K H  NPL GC P+ +QIPVF  ++ 
Sbjct: 61  TKQMQEINPQMQAIRKKYANDRVKM-TEEMQKLQKEHGFNPLLGCLPMFMQIPVFIGLFH 119

Query: 446 VI---------------------SISLEMRHAPFWGWIKD--------------LAAA-- 468
           V+                       + + R    + +  D              L++   
Sbjct: 120 VLRSFNRMGAGTSMPIGGSSSGGMTAEQTRETANYAFSADQVQNFLDARLFGVPLSSYIT 179

Query: 469 ---DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM-------KMSPPPADKGQAM 518
              +    F   G    +    +   + P+++  S+   M       + S    D  Q  
Sbjct: 180 EPVEQFKAFVEPGQPIDFTRWQIAAVVIPLMIVASIATHMNSRASVARQSAEAMDNPQTR 239

Query: 519 IL-----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           I+        P+  +     FP  +++YW  +N+ +  QQ ++
Sbjct: 240 IMNKLALYVFPLGILVTGPFFPVAILLYWVSNNLWTYGQQHLV 282


>gi|302877173|ref|YP_003845806.1| membrane protein insertase, YidC/Oxa1 family [Clostridium
           cellulovorans 743B]
 gi|307687872|ref|ZP_07630318.1| putative inner membrane protein translocase component YidC
           [Clostridium cellulovorans 743B]
 gi|302580030|gb|ADL54042.1| membrane protein insertase, YidC/Oxa1 family [Clostridium
           cellulovorans 743B]
          Length = 224

 Score =  100 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 26/225 (11%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
                  + +L S   NL  + G++I++ ++F K+  FPL  KQ  S+  M+ IQP++ +
Sbjct: 10  TTIFEWIVNLLDSGINNLNISVGLSIIVFSIFFKICLFPLNIKQIKSSFKMREIQPEVAK 69

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L+ K+ +S PQ L +A +QLYK    +P AGC P+LLQ PV  A+Y V   + E+     
Sbjct: 70  LQAKY-KSDPQKLNQATMQLYKESGASPFAGCLPLLLQWPVLMAMYFVFKDA-EIIKGHS 127

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-KGQA 517
           + W+ DL+A DP                     I P++ + + +I    S         A
Sbjct: 128 FLWLTDLSARDPRY-------------------ILPVLTAATTYISTTYSTKQTQTAEAA 168

Query: 518 MILNWMPV----VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
             ++ M +    + +F   +  + +++Y+   N+    Q  +I K
Sbjct: 169 KNMSTMTIVTTGMMLFMSLTLNSAVVMYYVIGNIFQFAQTYLIQK 213


>gi|322390080|ref|ZP_08063615.1| SpoIIIJ family protein [Streptococcus parasanguinis ATCC 903]
 gi|321143207|gb|EFX38650.1| SpoIIIJ family protein [Streptococcus parasanguinis ATCC 903]
          Length = 305

 Score =  100 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 84/229 (36%), Gaps = 36/229 (15%)

Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQL 418
             ++  + +  L    + K    +  M  ++P +  ++E+ K +  Q      Q+ ++  
Sbjct: 67  VTLIVRLIILPLGLYQSWKATYQSEKMNYLKPILGPIQERMKNASTQEEKLLAQQELMAA 126

Query: 419 YKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            + + ++     GC P+L+Q+P F A++     +                 AD +     
Sbjct: 127 QRENGVSMFGGVGCLPLLIQMPFFSALFFAAQHTK--------------GVADSS----- 167

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL----NWMPVVFVFAL 531
           F  +    P  +   I  ++     +IQ  +S     D+ Q   +       P++     
Sbjct: 168 FLGIALGKPSLLLTAIVAVLY----YIQSMLSLHGIEDETQKESMRKASLMSPIMIGVFS 223

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
               AG+ +YW    VI I+QQ VI   +     L  R+   +  N   
Sbjct: 224 LISSAGVTLYWVVGGVIQIIQQFVIN--YLIRPNLRKRVAEEYKNNPPK 270


>gi|168702122|ref|ZP_02734399.1| hypothetical protein GobsU_21520 [Gemmata obscuriglobus UQM 2246]
          Length = 845

 Score =  100 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 84/530 (15%), Positives = 175/530 (33%), Gaps = 97/530 (18%)

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF---ERTISLDE 176
           +          NN +     T W ++S K         +  K      F    +T +L  
Sbjct: 216 FTVFHYPTPDDNNPDPLLGETNWTVVSEKRPADGPHEVVFEKELGEPYFVKIRKTYTLAR 275

Query: 177 HYLFKIVDTVTNN----SIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
                 +             + +   + ++   +       +      +A++G +     
Sbjct: 276 TDYHIGLHVGIEKLKVPGAAKGKGQLKYQLSGPRGLPIEGEWYTSTYRVAIVGWRERNGT 335

Query: 233 ---KYSDIEK-------SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF------- 275
              +Y D                  +  ++ ++++++AS            +        
Sbjct: 336 LRRQYEDAASIGSKRGGEKARREDNTFHYMAVANQFFASAVAIDYSADEAKKTHPWSYVR 395

Query: 276 -----------KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH----- 319
                                  + ++  I + PG+S     F++ G  +   +      
Sbjct: 396 ATTELPLDKKQDPQMPNFDDITVRAASETIDLEPGQSTAHRYFIYNGPAKVGLLKLLPKV 455

Query: 320 ----------------------------HYEKDLAIPRFEMLIDWGWFYF-IAKPMFMLM 350
                                        +  D AI RF   I W      +   M +L+
Sbjct: 456 EVNGQKVPAVREELVDQYKDTMMMSSITDFRSDTAIGRFASFIFWTDLVIAMTNLMHILL 515

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKIDELREKFKQS 406
           +  ++++G++ ++I++ TV V+L+    ++             K +QP+ ++L+EK+K  
Sbjct: 516 AAIHSVLGHWALSIVMLTVCVRLVLMYPSRKQTAMSMKMMEVQKRLQPEFEKLQEKYKDD 575

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV-------ISISLEMRHAPFW 459
                 +   +L   +  NP A     LL     FA   V       +  S+  R    +
Sbjct: 576 FNT-YNREKTRLMMANGANPFAMAGGCLL----LFAQMPVMMGLYFCLQESIFFRLDS-F 629

Query: 460 GWIKDLAAADPTNIFT---LFGILPFYLPGFMHVG----IWPIIMSLSMFIQM-KMSPPP 511
            WI +LAA D    +T    +   P  +  F+++G    + P++    M  Q  KM PP 
Sbjct: 630 LWIDNLAAPDMLKWWTEQIPYVSTPDDIGSFIYLGPYFNLLPLLAVGLMLFQQSKMMPPA 689

Query: 512 ADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            D     Q M++  M ++         AGL +Y+  S   +I+++ +I K
Sbjct: 690 TDPQAEQQRMMMKLMMIMMAVFFYKVAAGLALYFIVSTAWAIIERQLIPK 739


>gi|227515638|ref|ZP_03945687.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           fermentum ATCC 14931]
 gi|227086068|gb|EEI21380.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           fermentum ATCC 14931]
          Length = 303

 Score =  100 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 41/257 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + ++AKPM  LM +F  L GN +G AI+   V V+L+  PL   Q   +  M+     + 
Sbjct: 36  YDYLAKPMQHLMEWFAGLFGNSYGWAIVALVVVVRLILLPLMMSQMKKSTMMQERMAMLQ 95

Query: 398 ELREKFKQSPPQVLQ--------KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
                 ++   +           +AM+  YK +N++     GC P+L+Q+PVF A+Y  I
Sbjct: 96  PQMRALQERQKRAKTPEEQAAASQAMMSFYKDNNVSLTGGIGCLPLLIQLPVFSALYFAI 155

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S ++  A F+G                       L       +  I+  ++  IQ  +
Sbjct: 156 RYSPDLAQASFFG-----------------------LQLGQRSALLAIMAFVAYLIQGWL 192

Query: 508 SPPPADKGQAMIL----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           S     + Q   +       P++ +F      AGL +Y+    V +I+Q  ++       
Sbjct: 193 SMLGVPEDQKKQMRMALMMSPIMILFISWQASAGLGLYFFIGGVFAILQTWLVN---IYR 249

Query: 564 IGLIDRLRSTFSKNYNS 580
             +  ++     KN   
Sbjct: 250 PRIRKQIHEEMKKNPPK 266


>gi|227530490|ref|ZP_03960539.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           vaginalis ATCC 49540]
 gi|227349595|gb|EEJ39886.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           vaginalis ATCC 49540]
          Length = 322

 Score =  100 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 35/253 (13%)

Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            + ++AKPM  LM +   +L  N+G AI++  V V+ +  P+   Q   +  M+    KI
Sbjct: 35  TYTYLAKPMQHLMEWLASHLGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKMAKI 94

Query: 397 DEL--------REKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKV 446
             L        RE         +   M+ +Y+ +N++     GC P+L+Q PVF A+Y  
Sbjct: 95  QPLLKDLQKKQREAKTPEEQAAVGAQMMAVYRENNVSLTGGIGCLPLLIQFPVFAALYAA 154

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
           I  S ++ HA F G    +A   P+ +F +   + + +  ++ +   P            
Sbjct: 155 IRYSPDLYHATFMG----IALGKPSILFAILSFVAYAVQSYLGLVGVP------------ 198

Query: 507 MSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
                  K Q  +  WM P +  F   +  AGL +Y+    + +I+Q  +I         
Sbjct: 199 ----EEQKKQMKMAIWMSPFMTFFISLTSSAGLGLYFFIGGLFAILQTLMIN---AYRPR 251

Query: 566 LIDRLRSTFSKNY 578
           +  ++     KN 
Sbjct: 252 IRRQIAEENKKNP 264


>gi|332686710|ref|YP_004456484.1| inner membrane protein translocase component YidC [Melissococcus
           plutonius ATCC 35311]
 gi|332370719|dbj|BAK21675.1| inner membrane protein translocase component YidC, OxaA protein
           [Melissococcus plutonius ATCC 35311]
          Length = 315

 Score =  100 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 94/258 (36%), Gaps = 39/258 (15%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +   +     M+     +   N+G AI++ T+ V+++  PL   Q   +         + 
Sbjct: 39  YNLLVQPMSNMITYLVNHFNWNYGWAIIVITIVVRIIILPLGLYQSHKSLVQSEKMQALK 98

Query: 398 ELREKFKQSPPQVLQKA--------MIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
              +  + +  Q   +         M ++YK +N++ +   GC P+L+Q+P+F A++   
Sbjct: 99  PQLDIAQSNLKQAKTQEEQLNARADMQRVYKENNVSMVGGIGCLPLLIQMPIFSALFFAA 158

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             +  +  A                    F  +    P  + V     +   +  +Q  +
Sbjct: 159 KYTKGITQA-------------------NFLGISLGKPSLVFVA----LAGAAYLLQGYL 195

Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           S     + Q   +  M    P++ VF   S PAG+ +YW    + + +Q  +   +    
Sbjct: 196 STIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQTFITNVLM--R 253

Query: 564 IGLIDRLRSTFSKNYNSQ 581
             +  ++      N   Q
Sbjct: 254 PKIKAKIEEDLKNNPPKQ 271


>gi|70725945|ref|YP_252859.1| lipoprotein [Staphylococcus haemolyticus JCSC1435]
 gi|82593013|sp|Q4L7X2|OXAA_STAHJ RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|68446669|dbj|BAE04253.1| lipoprotein precursor [Staphylococcus haemolyticus JCSC1435]
          Length = 291

 Score =  100 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 105/260 (40%), Gaps = 35/260 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           ++    +PM  ++ +  + V N  +GIAI++  + ++++  P     Y ++  M+     
Sbjct: 32  FYNTFVEPMSKVLHWLGHSVFNDDYGIAIIVLVLVIRIILLPFMLSNYKNSHLMREKMKV 91

Query: 396 --------IDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + M+++YK ++INP+    GC P+L+Q+PV   +Y
Sbjct: 92  AKPEVDGVQEKVKRARTQEEKMAANQEMMEVYKKYDINPMKSALGCLPVLIQMPVVMGLY 151

Query: 445 KVISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   +   +   P + W  +L   D                      I  ++  +  +
Sbjct: 152 FVLRYRIGGGIAEHPHFLWF-NLIHPD-----------------IWITIIAGVLYFIQAW 193

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG- 561
           +  K  P    +   M++   P++ ++   S  + L +YWS S    +VQ       +  
Sbjct: 194 VSSKQMPQEQRQMTYMMMIVSPIMIIWISLSSASALGLYWSVSAAFLVVQTYFANMYYEK 253

Query: 562 -AEIGLIDRLRSTFSKNYNS 580
            A+  +   +      N NS
Sbjct: 254 VAQREVAPMIEKFKENNSNS 273


>gi|269216520|ref|ZP_06160374.1| inner membrane protein OxaA [Slackia exigua ATCC 700122]
 gi|269130049|gb|EEZ61131.1| inner membrane protein OxaA [Slackia exigua ATCC 700122]
          Length = 254

 Score =  100 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 118/228 (51%), Gaps = 14/228 (6%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            +      +F  + +FYN+VG++G+AI++ TV  +++  P+  KQ  S+  M+ +QP ++
Sbjct: 1   MWDAFKDLIFACVQFFYNIVGDWGLAIIIITVIFRIIVAPIMHKQSKSSYQMQKMQPLMN 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRH 455
           E++ KF    P  +Q+ M ++Y     NPLAGC P+LLQ+P+F A+++ +    S E   
Sbjct: 61  EIQTKFAD-DPTRMQEEMQKMYAETKFNPLAGCLPMLLQMPIFMAMFQTLRNIGSYEDTS 119

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
             F+G + DL AA  T      G        F+   I  ++ +L+ F+ M +     D  
Sbjct: 120 YTFYGLVPDLTAAPSTMFSQGIG-------AFIPYLILMLVFALATFMPMILQNIKNDSK 172

Query: 516 QAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           Q   +  M     V+ ++     PAG++++W  S++  I QQ +  + 
Sbjct: 173 QRNQMLIMGVIMTVMMLWISWGSPAGVLLFWGVSSIFGIAQQQLTNRY 220


>gi|297243216|ref|ZP_06927151.1| preprotein translocase subunit YidC [Gardnerella vaginalis AMD]
 gi|296888750|gb|EFH27487.1| preprotein translocase subunit YidC [Gardnerella vaginalis AMD]
          Length = 337

 Score =  100 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 107/256 (41%), Gaps = 21/256 (8%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            + +            +              + +     +  ++  +I+   + V    F
Sbjct: 8   ILDNGFLGWFYKILTPVEWLMTQIMSLFHKLLTLLGMNEIGFSWVFSIVFLVLVVHACIF 67

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWP 432
           P   K       M+ I PK+ ++++K+K        + +Q+ M++LY+ +  NP   C P
Sbjct: 68  PAFIKSIKGMRKMQAIAPKVKKIQQKYKGKNDPASKEAMQREMMKLYQDNKANPAGSCLP 127

Query: 433 ILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGI------LPFYLP 485
           +++Q P F +I+  +S+     R         D+A A       +FG+      +     
Sbjct: 128 MMIQGPAFMSIWYTLSVIPFIARGKHAALGAFDIATAQQFVKTRVFGVGVADTFMTTAGA 187

Query: 486 GFMHVGIWPIIMSLSMFIQM----KMSPPPADKG------QAMILNWMPVVFVFALSSFP 535
           G + + I+ ++M  +M+       + + PP  K       Q +++   P+++VF+  + P
Sbjct: 188 GKIVIVIFVVLMCAAMWYMQFNNIRKNLPPESKQGSQYTVQKLMMWGFPLIYVFSAFAMP 247

Query: 536 AGLIIYWSWSNVISIV 551
             +++YW  +NVI+++
Sbjct: 248 FAMLVYWLVNNVINML 263


>gi|74178496|dbj|BAE32503.1| unnamed protein product [Mus musculus]
 gi|74181916|dbj|BAE32657.1| unnamed protein product [Mus musculus]
          Length = 433

 Score = 99.7 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ Y + +L   +  AI   TV  + L FPL  K     A + N  P++ 
Sbjct: 113 SYTPVGLIQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQ 172

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++     Q    +         K H+I  L      L Q PVF + +  +   
Sbjct: 173 KFSARIREAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREM 232

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + + P++++ +M+  ++
Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWCVLE 273

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         I+  MP+V +     FP+ + +YW  SNV S+ Q
Sbjct: 274 LGAETGVQSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324


>gi|258614348|ref|ZP_05712118.1| integral membrane protein [Enterococcus faecium DO]
          Length = 222

 Score = 99.7 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 78/209 (37%), Gaps = 31/209 (14%)

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQ 436
             +     A    ++    +L+    +      Q  M Q+Y+ + ++     GC P+L+Q
Sbjct: 1   MIQSEKMQALKPQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQ 60

Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           +P+F A+Y     +  +R + F+G   DL +                        +   I
Sbjct: 61  MPIFSALYFTARYTEGIRESSFYG--IDLGSP---------------------SMVLVAI 97

Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
             ++  +Q  +S     + Q   +  M    P + VF   S PAG+ +YW    V S +Q
Sbjct: 98  AGVAYLLQGYISTIGIPEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQ 157

Query: 553 QAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +   M   +  L  ++     +N   Q
Sbjct: 158 TFITNVMM--KPRLKAQVAEELKQNPPKQ 184


>gi|20073181|gb|AAH27191.1| Oxa1l protein [Mus musculus]
          Length = 411

 Score = 99.7 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 81/216 (37%), Gaps = 35/216 (16%)

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
           F  L   +  AI   TV  + L FPL  K     A + N  P++ +   + +++     Q
Sbjct: 106 FTELGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQ 165

Query: 413 KAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGW 461
               +         K H+I  L      L Q PVF + +  +     +           W
Sbjct: 166 AEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVPSLQTGGLWW 225

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----Q 516
            +DL  +DP                   + + P++++ +M+  +++      +       
Sbjct: 226 FQDLTVSDP-------------------IYVLPLVVTATMWCVLELGAETGVQSNDLQFM 266

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
             I+  MP+V +     FP+ + +YW  SNV S+ Q
Sbjct: 267 RNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 302


>gi|257785164|ref|YP_003180381.1| 60 kDa inner membrane insertion protein [Atopobium parvulum DSM
           20469]
 gi|257473671|gb|ACV51790.1| 60 kDa inner membrane insertion protein [Atopobium parvulum DSM
           20469]
          Length = 252

 Score = 99.7 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 121/246 (49%), Gaps = 17/246 (6%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            + +I   ++ +++   +  G++G+A++L T+ ++++  P+  KQ  S A M  +QPK+ 
Sbjct: 1   MWDWIVNFLYTVLAGLQSFSGDWGMAVILLTIIIRIILVPMTNKQTASMARMSVVQPKLK 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHA 456
           E++E++   P     + M +LY   N NPL GC P+LLQ P+F A++ V   + ++ R  
Sbjct: 61  EIQERYADDPV-RQNEEMRKLYAEINFNPLGGCLPLLLQSPIFIALFTVAKMVPVDSR-- 117

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPAD 513
             +  I    A   ++IFT+ G +       +   I+ ++  L+ F+ M ++        
Sbjct: 118 --FYGILPSIARTTSDIFTVDGFV-----SAIPYMIFVLLFGLTTFLSMAVNARTSSGEQ 170

Query: 514 KGQAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           + Q  ++   M ++ ++   + PA +++Y+  S V  + QQ +I K       L     +
Sbjct: 171 RTQQYMMGGIMTLMMLWFGWTVPAAVLLYYVTSGVWQLAQQQLITKRIMEREKLKA--EA 228

Query: 573 TFSKNY 578
             +   
Sbjct: 229 QMANKP 234


>gi|551760|gb|AAA73145.1| inner membrane protein [Buchnera aphidicola]
          Length = 273

 Score = 99.7 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 84/291 (28%), Gaps = 33/291 (11%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           ME   N+F+   L  +    WQ +      +   NE  N                     
Sbjct: 1   MELQRNFFIFAFL-FVSFLLWQAWQSQSLKKNKKNEETNS-----------------FFH 42

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                    ++ +KN  L   IN+ G   ++ +L  Y   ++S   +  L   + +   Y
Sbjct: 43  LNHKKEDKNQIIIKNDVLRLVINMYGGDIEEASLLDYKTQLNSPENLKLL--ETKSDFVY 100

Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFK-----NANNILFERTISL 174
            A+   +     +  +     +++             +L               +  I  
Sbjct: 101 QAQSGLIGKDGLDNSINKIRPLYSAKKNFFELGHNEKELRVPITFIAKNGITYIKNFILK 160

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227
              Y  ++   + N S  ++  +  G++ +           +         G      D 
Sbjct: 161 PGKYNVEVEYDINNLSNKKLELNIFGQLKQTVKLPKNRDIYSGNFALQTFRGAAYSSSDA 220

Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278
              + K+ +I      +    + W+ +  +Y+   ++P    S  +     
Sbjct: 221 KYEKYKFDNIANHEHLHIITHHGWIAMLQQYFVVAWVPDTNISSSNIIYTS 271


>gi|120407004|ref|YP_956833.1| putative inner membrane protein translocase component YidC
           [Mycobacterium vanbaalenii PYR-1]
 gi|119959822|gb|ABM16827.1| 60 kDa inner membrane insertion protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 374

 Score = 99.7 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 94/238 (39%), Gaps = 39/238 (16%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
              + +++M     ++ + +    +Q  +T  M+ +QP+I  L++K+     Q +   M 
Sbjct: 42  FFAWALSVMFLVFTLRAILYKPFVRQIRTTRQMQELQPQIKALQKKY-GKDRQRMALEMQ 100

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS--------------LEMRHAP-FWGW 461
           +L + H  NP+ GC P+L QIPVF  +Y V+                  E R  P ++  
Sbjct: 101 KLQREHGFNPILGCLPMLAQIPVFLGLYHVLMSFNRTQTGIGRLGLSVEENRSLPNYFFS 160

Query: 462 IKDLAAADPTNIFT------------LFGILPFYLPGFMHVGIWPIIM-SLSMFIQMK-- 506
             D+      N+F             L     F     + VG+  +IM  ++ +   +  
Sbjct: 161 ATDVGHFLDANLFGAPLGATMIQQHGLDAFTEFNRLSVIVVGVPIMIMAGIATYFNSRAS 220

Query: 507 ---MSPPPADKGQAMIL-----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
               SP  A   Q  ++        P+  V      P  +I+YW  +N+ +  QQ  +
Sbjct: 221 VARQSPEAAANPQTAMMNKLALYVFPLGVVVGGPFLPLAIILYWFANNIWTFGQQHYV 278


>gi|307709883|ref|ZP_07646331.1| membrane protein oxaA 1 [Streptococcus mitis SK564]
 gi|307619373|gb|EFN98501.1| membrane protein oxaA 1 [Streptococcus mitis SK564]
          Length = 274

 Score = 99.7 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 101/233 (43%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  +   F+      F  +  F +   + G+ I+L TV ++ L  P+ + Q V++  M+
Sbjct: 29  DITANSADFWSKFVYFFAEIIRFLSFDISIGVGIILFTVLIRTLLLPVFQVQMVASRKMQ 88

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 89  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI                     L G     + PI+ ++  F+   +
Sbjct: 149 SR-VDFLKTGHFLWIN--------------------LGGVDTTLVLPILAAVFTFLSTWL 187

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P+G+ +YW+ SN   ++Q   + 
Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFGVYAPSGVALYWAVSNAYQVLQTYFLN 240


>gi|256617039|ref|ZP_05473885.1| inner membrane protein [Enterococcus faecalis ATCC 4200]
 gi|307277162|ref|ZP_07558266.1| putative OxaA-like protein [Enterococcus faecalis TX2134]
 gi|256596566|gb|EEU15742.1| inner membrane protein [Enterococcus faecalis ATCC 4200]
 gi|306506092|gb|EFM75258.1| putative OxaA-like protein [Enterococcus faecalis TX2134]
          Length = 310

 Score = 99.7 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           + + + +      +     N   N+G AI+  T+ V+++  PL   Q   +         
Sbjct: 37  FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96

Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           I          +++   +      Q  + ++YK +N++ +   GC P+L+Q+P+F +++ 
Sbjct: 97  IKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  A F G   +L   +                      I   +  L+   Q 
Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193

Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            +S     + Q   +  M    P++ VF   S PAG+ +YW    + + +Q A+      
Sbjct: 194 YISMIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251

Query: 562 AEIGLIDRLRSTFSKNYNSQ 581
               +  +++     N   Q
Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271


>gi|157149880|ref|YP_001449837.1| OxaA-like protein precursor [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157074674|gb|ABV09357.1| Membrane protein oxaA 2 precursor [Streptococcus gordonii str.
           Challis substr. CH1]
          Length = 310

 Score = 99.7 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 99/261 (37%), Gaps = 39/261 (14%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF----PLAKKQYVSTANM 389
             + + + +A    ++  +  +L   FG+AI+L TV V+L+        +      +   
Sbjct: 35  QGFVYQFLVAPMSQVIKYFASDLGLGFGLAIILVTVIVRLIILPLGLYQSWNATYQSEKR 94

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPL--AGCWPILLQIPVFFAI 443
             + P    + E+ K +  Q  + A  Q      K + I+ L   GC P+L+Q+P F A+
Sbjct: 95  NYLSPIFTPINERMKNAETQEEKLAAQQALMAAQKENGISMLGGVGCLPLLIQMPFFSAL 154

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           +     +  +  +                    F  +           I  +++ +  +I
Sbjct: 155 FYAARYTKGIAESS-------------------FLGINLGQQSM----ILIVVVGVLYYI 191

Query: 504 QMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           Q  +S    D+ Q   +  M    P++ V    + PAG+ +YW     + I+QQ +I   
Sbjct: 192 QSLLSLVGLDEEQKEQMKKMIYVSPLMIVIFSLTAPAGVTLYWVVGGFVQILQQFIIN-- 249

Query: 560 HGAEIGLIDRLRSTFSKNYNS 580
                 +  R+   + KN   
Sbjct: 250 FFIRPYMKKRVAEEYEKNPPK 270


>gi|217928118|gb|ACK57254.1| CG6404-like protein [Drosophila affinis]
          Length = 305

 Score = 99.7 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 85/211 (40%), Gaps = 38/211 (18%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQ 412
           +  AI + T+ V+ + FPL      ++A M N  P++  L+ K  ++             
Sbjct: 111 WWGAIAVGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQLLQLKMTEARQSGNAIESARYA 170

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468
           + M+   +   +NPL      L Q P+F      + ++ +  ++        W +DL  A
Sbjct: 171 QEMMLFMRDKGVNPLKNMIVPLAQAPLFISFFMGLRQMANTPVDSMRDGGLWWFQDLTLA 230

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQAMILN 521
           DP                     I P+I S ++++         ++S    +     +L 
Sbjct: 231 DPFY-------------------ILPLITSATLYLTIEIGTDSARLSAANMNTM-KYVLR 270

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            +P+V      +FPA ++ YW+ SN IS+ Q
Sbjct: 271 ALPLVIFPFTMNFPAAILTYWACSNFISLGQ 301


>gi|297588064|ref|ZP_06946708.1| YidC/Oxa1 family membrane protein insertase [Finegoldia magna ATCC
           53516]
 gi|297574753|gb|EFH93473.1| YidC/Oxa1 family membrane protein insertase [Finegoldia magna ATCC
           53516]
          Length = 221

 Score = 99.7 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 42/236 (17%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           +  F I+I+L T+  KL+  P+      +      +QP+I E++ K+K   PQ  Q  M 
Sbjct: 7   ISYFAISILLLTLIYKLITLPVTIHTQKTQEQNALMQPEIKEIQRKYKN-DPQTQQLKMQ 65

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---------ISLEMRHAPFWGWIKDLAA 467
           +LYK +N NPL+GC PI+LQ+ +  A+++V+          ++     A  + WI DL  
Sbjct: 66  ELYKKYNFNPLSGCLPIILQMVLVLALFRVMREPGKYMFDNVAKINEIARNFFWIPDLTK 125

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-------KGQAMIL 520
            DP     LFG               P+I + + F+  K+S P  +         Q  ++
Sbjct: 126 PDPV----LFG--------------LPLINAFTQFLVAKISMPTNNKDKKSNEPDQMEMM 167

Query: 521 -----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
                 +MP+   F  S + +GLI+YW +SNV+ ++ + +I   +  +  + + +R
Sbjct: 168 NKSMIYFMPIFMFFISSKYASGLILYWGFSNVLEVIIRLII--KNKDKKDVAEEVR 221


>gi|315611871|ref|ZP_07886790.1| SpoIIIJ family protein [Streptococcus sanguinis ATCC 49296]
 gi|315316049|gb|EFU64082.1| SpoIIIJ family protein [Streptococcus sanguinis ATCC 49296]
          Length = 312

 Score = 99.3 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 79/209 (37%), Gaps = 24/209 (11%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+ L   GC+P
Sbjct: 86  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMLGGVGCFP 145

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+Q+P F AIY     +  +  A + G                   +P   P  + V  
Sbjct: 146 ILIQMPFFSAIYFAAQHTDGVAQASYLG-------------------IPLGSPSMILVAC 186

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551
             ++  L   + +        + Q   + +M P++ VF     PA + +YW     + I+
Sbjct: 187 AGVLYYLQSLLSLHGVEDEMQREQLKKMIYMSPLMIVFFSFFAPASVTLYWVVGGFMMIL 246

Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           QQ ++   +     L  ++R  F+KN   
Sbjct: 247 QQFIVN--YVVRPKLRKKVREEFAKNPPK 273


>gi|160932432|ref|ZP_02079822.1| hypothetical protein CLOLEP_01267 [Clostridium leptum DSM 753]
 gi|156868391|gb|EDO61763.1| hypothetical protein CLOLEP_01267 [Clostridium leptum DSM 753]
          Length = 352

 Score = 99.3 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 52/275 (18%), Positives = 111/275 (40%), Gaps = 54/275 (19%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
              F +I      L+ +FY    N+G++I+L T+ +K++ FP + KQ  S A    +Q K
Sbjct: 1   MQIFSWIGNVFGYLLWFFYEFTKNYGVSIILFTIVLKIIMFPFSIKQQKSMAKNTRLQGK 60

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW----PILLQIPVFFAIYKVISISL 451
             E+++K+  +  Q + + M +LY+   +NP+ GC     P+++ + +++++   +  +L
Sbjct: 61  QKEIQKKYGDNK-QKMSEEMQKLYQQEGVNPMGGCLTSIIPLIIMMGIYYSVVNPLQNTL 119

Query: 452 EMRHA-------------------PFWGWIKDL--------------AAADPTNI----- 473
            +  +                     +    DL              +A +  NI     
Sbjct: 120 HIAGSKVTEAMQLLQQVPGVGNLFSGFYGEIDLVKHFDFFKDFLPMFSADEAANIASFGQ 179

Query: 474 -FTLFGILPFYLP----GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM------ILNW 522
            F   G+     P        + + P++  +S  +   + P       AM      ++  
Sbjct: 180 GFNFLGLNLLDTPQSSSFSSMLWLIPVLCLVSSLVTQWLMPKITGNQMAMQGCMKWMMFI 239

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +P+   +   + PA +  YW  + V+  +Q  V+ 
Sbjct: 240 LPLFSAWIAYTVPAAVGFYWIINTVLQFLQTWVLN 274


>gi|257421952|ref|ZP_05598942.1| integral membrane protein [Enterococcus faecalis X98]
 gi|257163776|gb|EEU93736.1| integral membrane protein [Enterococcus faecalis X98]
          Length = 309

 Score = 99.3 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           + + + +      +     N   N+G AI+  T+ V+++  PL   Q   +         
Sbjct: 37  FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96

Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           I          +++   +      Q  + ++YK +N++ +   GC P+L+Q+P+F +++ 
Sbjct: 97  IKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  A F G   +L   +                      I   +  L+   Q 
Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193

Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            +S     + Q   +  M    P++ VF   S PAG+ +YW    + + +Q A+      
Sbjct: 194 YISMIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251

Query: 562 AEIGLIDRLRSTFSKNYNSQ 581
               +  +++     N   Q
Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271


>gi|229545175|ref|ZP_04433900.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus
           faecalis TX1322]
 gi|229309720|gb|EEN75707.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus
           faecalis TX1322]
          Length = 310

 Score = 99.3 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           + + + +      +     N   N+G AI+  T+ V+++  PL   Q   +         
Sbjct: 37  FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96

Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           I          +++   +      Q  + ++YK +N++ +   GC P+L+Q+P+F +++ 
Sbjct: 97  IKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  A F G   +L   +                      I   +  L+   Q 
Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193

Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            +S     + Q   +  M    P++ VF   S PAG+ +YW    + + +Q A+      
Sbjct: 194 YISMIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251

Query: 562 AEIGLIDRLRSTFSKNYNSQ 581
               +  +++     N   Q
Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271


>gi|312905127|ref|ZP_07764248.1| putative OxaA-like protein [Enterococcus faecalis TX0635]
 gi|310631517|gb|EFQ14800.1| putative OxaA-like protein [Enterococcus faecalis TX0635]
          Length = 310

 Score = 99.3 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           + + + +      +     N   N+G AI+  T+ V+++  PL   Q   +         
Sbjct: 37  FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96

Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           I          +++   +      Q  + ++YK +N++ +   GC P+L+Q+P+F +++ 
Sbjct: 97  IKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  A F G   +L   +                      I   +  L+   Q 
Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193

Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            +S     + Q   +  M    P++ VF   S PAG+ +YW    + + +Q A+      
Sbjct: 194 YISMIGIPEEQKKTMKSMLIVPPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251

Query: 562 AEIGLIDRLRSTFSKNYNSQ 581
               +  +++     N   Q
Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271


>gi|304404107|ref|ZP_07385769.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus
           curdlanolyticus YK9]
 gi|304347085|gb|EFM12917.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus
           curdlanolyticus YK9]
          Length = 280

 Score = 99.3 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 31/242 (12%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           +      + ++I  P   ++ +      G++G++I++ T+ V+L+  PL  +Q      M
Sbjct: 39  DSSTPGTFNHYIVYPFSAVIQHVATWFDGSYGLSIIVITLLVRLILMPLMIRQQTGQLAM 98

Query: 390 KNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVF 440
           +     +           + K      + LQ+  +QLY+ H +NPL  GC P+L+Q+P+ 
Sbjct: 99  RAKMKTLTPELNAVKEKYKSKKDAESQRKLQQETMQLYQQHGVNPLAIGCLPLLIQLPIL 158

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             +Y  I ++ E++    + W K L +ADP        I+PF   G   +          
Sbjct: 159 TGLYYAIRMTPELK-THAFLWFK-LGSADP--------IMPFIAAGVYLIQ--------- 199

Query: 501 MFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            F+  ++S       K  AM++   P++      + PA L +YW+   V  I Q  +  +
Sbjct: 200 SFVSQRLSGSDASQQKQMAMLMYLSPIMMGLFSFTAPAALPLYWAVGGVFMIGQSWLAYR 259

Query: 559 MH 560
           ++
Sbjct: 260 LY 261


>gi|227553936|ref|ZP_03983983.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus
           faecalis HH22]
 gi|229549423|ref|ZP_04438148.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus
           faecalis ATCC 29200]
 gi|255972127|ref|ZP_05422713.1| inner membrane protein [Enterococcus faecalis T1]
 gi|255975194|ref|ZP_05425780.1| inner membrane protein [Enterococcus faecalis T2]
 gi|256763098|ref|ZP_05503678.1| inner membrane protein [Enterococcus faecalis T3]
 gi|256853765|ref|ZP_05559130.1| inner membrane protein [Enterococcus faecalis T8]
 gi|256956682|ref|ZP_05560853.1| inner membrane protein [Enterococcus faecalis DS5]
 gi|256961301|ref|ZP_05565472.1| inner membrane protein [Enterococcus faecalis Merz96]
 gi|256963572|ref|ZP_05567743.1| inner membrane protein [Enterococcus faecalis HIP11704]
 gi|257079637|ref|ZP_05573998.1| inner membrane protein [Enterococcus faecalis JH1]
 gi|257082017|ref|ZP_05576378.1| inner membrane protein [Enterococcus faecalis E1Sol]
 gi|257084568|ref|ZP_05578929.1| inner membrane protein [Enterococcus faecalis Fly1]
 gi|257087436|ref|ZP_05581797.1| inner membrane protein [Enterococcus faecalis D6]
 gi|257090596|ref|ZP_05584957.1| inner membrane protein [Enterococcus faecalis CH188]
 gi|257416643|ref|ZP_05593637.1| inner membrane protein [Enterococcus faecalis AR01/DG]
 gi|257419859|ref|ZP_05596853.1| inner-membrane protein [Enterococcus faecalis T11]
 gi|293383585|ref|ZP_06629495.1| SpoJ protein [Enterococcus faecalis R712]
 gi|294780917|ref|ZP_06746271.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis
           PC1.1]
 gi|300860707|ref|ZP_07106794.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis
           TUSoD Ef11]
 gi|307270839|ref|ZP_07552126.1| putative OxaA-like protein [Enterococcus faecalis TX4248]
 gi|307271511|ref|ZP_07552783.1| putative OxaA-like protein [Enterococcus faecalis TX0855]
 gi|307285813|ref|ZP_07565947.1| putative OxaA-like protein [Enterococcus faecalis TX0860]
 gi|307287716|ref|ZP_07567759.1| putative OxaA-like protein [Enterococcus faecalis TX0109]
 gi|307290544|ref|ZP_07570456.1| putative OxaA-like protein [Enterococcus faecalis TX0411]
 gi|312899834|ref|ZP_07759153.1| putative OxaA-like protein [Enterococcus faecalis TX0470]
 gi|312906136|ref|ZP_07765148.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 512]
 gi|312909481|ref|ZP_07768336.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 516]
 gi|312953484|ref|ZP_07772324.1| putative OxaA-like protein [Enterococcus faecalis TX0102]
 gi|227176922|gb|EEI57894.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus
           faecalis HH22]
 gi|229305660|gb|EEN71656.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus
           faecalis ATCC 29200]
 gi|255963145|gb|EET95621.1| inner membrane protein [Enterococcus faecalis T1]
 gi|255968066|gb|EET98688.1| inner membrane protein [Enterococcus faecalis T2]
 gi|256684349|gb|EEU24044.1| inner membrane protein [Enterococcus faecalis T3]
 gi|256710708|gb|EEU25751.1| inner membrane protein [Enterococcus faecalis T8]
 gi|256947178|gb|EEU63810.1| inner membrane protein [Enterococcus faecalis DS5]
 gi|256951797|gb|EEU68429.1| inner membrane protein [Enterococcus faecalis Merz96]
 gi|256954068|gb|EEU70700.1| inner membrane protein [Enterococcus faecalis HIP11704]
 gi|256987667|gb|EEU74969.1| inner membrane protein [Enterococcus faecalis JH1]
 gi|256990047|gb|EEU77349.1| inner membrane protein [Enterococcus faecalis E1Sol]
 gi|256992598|gb|EEU79900.1| inner membrane protein [Enterococcus faecalis Fly1]
 gi|256995466|gb|EEU82768.1| inner membrane protein [Enterococcus faecalis D6]
 gi|256999408|gb|EEU85928.1| inner membrane protein [Enterococcus faecalis CH188]
 gi|257158471|gb|EEU88431.1| inner membrane protein [Enterococcus faecalis ARO1/DG]
 gi|257161687|gb|EEU91647.1| inner-membrane protein [Enterococcus faecalis T11]
 gi|291079097|gb|EFE16461.1| SpoJ protein [Enterococcus faecalis R712]
 gi|294452043|gb|EFG20491.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis
           PC1.1]
 gi|300849746|gb|EFK77496.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis
           TUSoD Ef11]
 gi|306498399|gb|EFM67904.1| putative OxaA-like protein [Enterococcus faecalis TX0411]
 gi|306501454|gb|EFM70757.1| putative OxaA-like protein [Enterococcus faecalis TX0109]
 gi|306502574|gb|EFM71841.1| putative OxaA-like protein [Enterococcus faecalis TX0860]
 gi|306511783|gb|EFM80781.1| putative OxaA-like protein [Enterococcus faecalis TX0855]
 gi|306512752|gb|EFM81397.1| putative OxaA-like protein [Enterococcus faecalis TX4248]
 gi|310627782|gb|EFQ11065.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 512]
 gi|310628693|gb|EFQ11976.1| putative OxaA-like protein [Enterococcus faecalis TX0102]
 gi|311290154|gb|EFQ68710.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 516]
 gi|311293084|gb|EFQ71640.1| putative OxaA-like protein [Enterococcus faecalis TX0470]
 gi|315025408|gb|EFT37340.1| putative OxaA-like protein [Enterococcus faecalis TX2137]
 gi|315030217|gb|EFT42149.1| putative OxaA-like protein [Enterococcus faecalis TX4000]
 gi|315032896|gb|EFT44828.1| putative OxaA-like protein [Enterococcus faecalis TX0017]
 gi|315035618|gb|EFT47550.1| putative OxaA-like protein [Enterococcus faecalis TX0027]
 gi|315146680|gb|EFT90696.1| putative OxaA-like protein [Enterococcus faecalis TX4244]
 gi|315150156|gb|EFT94172.1| putative OxaA-like protein [Enterococcus faecalis TX0012]
 gi|315152151|gb|EFT96167.1| putative OxaA-like protein [Enterococcus faecalis TX0031]
 gi|315155338|gb|EFT99354.1| putative OxaA-like protein [Enterococcus faecalis TX0043]
 gi|315159086|gb|EFU03103.1| putative OxaA-like protein [Enterococcus faecalis TX0312]
 gi|315161678|gb|EFU05695.1| putative OxaA-like protein [Enterococcus faecalis TX0645]
 gi|315164815|gb|EFU08832.1| putative OxaA-like protein [Enterococcus faecalis TX1302]
 gi|315166401|gb|EFU10418.1| putative OxaA-like protein [Enterococcus faecalis TX1341]
 gi|315170298|gb|EFU14315.1| putative OxaA-like protein [Enterococcus faecalis TX1342]
 gi|315173668|gb|EFU17685.1| putative OxaA-like protein [Enterococcus faecalis TX1346]
 gi|315574363|gb|EFU86554.1| putative OxaA-like protein [Enterococcus faecalis TX0309B]
 gi|315579045|gb|EFU91236.1| putative OxaA-like protein [Enterococcus faecalis TX0630]
 gi|315580162|gb|EFU92353.1| putative OxaA-like protein [Enterococcus faecalis TX0309A]
 gi|323481394|gb|ADX80833.1| Oxa1p cytochrome oxidase export family protein [Enterococcus
           faecalis 62]
 gi|327535690|gb|AEA94524.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus
           faecalis OG1RF]
 gi|329572240|gb|EGG53900.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis
           TX1467]
          Length = 310

 Score = 99.3 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           + + + +      +     N   N+G AI+  T+ V+++  PL   Q   +         
Sbjct: 37  FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96

Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           I          +++   +      Q  + ++YK +N++ +   GC P+L+Q+P+F +++ 
Sbjct: 97  IKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  A F G   +L   +                      I   +  L+   Q 
Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193

Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            +S     + Q   +  M    P++ VF   S PAG+ +YW    + + +Q A+      
Sbjct: 194 YISMIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251

Query: 562 AEIGLIDRLRSTFSKNYNSQ 581
               +  +++     N   Q
Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271


>gi|225859797|ref|YP_002741307.1| membrane protein OxaA 1 [Streptococcus pneumoniae 70585]
 gi|225721177|gb|ACO17031.1| membrane protein OxaA 1 [Streptococcus pneumoniae 70585]
          Length = 276

 Score = 99.3 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 104/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  +   F+  +   F  +  F +   + G+ I+L TV ++ +  P+ + Q V++  M+
Sbjct: 31  DITAESADFWSKSVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 90

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 91  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 150

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L + D T                    + PI+ ++  F+   +
Sbjct: 151 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 189

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 190 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242


>gi|154686651|ref|YP_001421812.1| OxaA-like protein precursor [Bacillus amyloliquefaciens FZB42]
 gi|154352502|gb|ABS74581.1| YqjG [Bacillus amyloliquefaciens FZB42]
          Length = 278

 Score = 99.3 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 92/224 (41%), Gaps = 30/224 (13%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE--------LREKFKQSP 407
             G +G++I+L T+ V+++  PL   Q+      +     I          +++      
Sbjct: 61  FHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRVFQEKMAVIKPQVDSIQAKMKQTKDAEK 120

Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            + LQ  M++LY+ HN+NP+  GC P+L+Q P+    Y  I  + E+             
Sbjct: 121 QKELQMEMMKLYREHNLNPMAMGCLPMLVQFPILIGFYYAIRSTPEIA------------ 168

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSMFIQMKMSPPPADK--GQ-AMILNW 522
               ++ F  F +    +   +  G    +   +S  +  K SP   +    Q A I+ +
Sbjct: 169 ----SHSFLWFSLGHSDILVSLCAGAMYFLQAYISQKLNEKYSPAAQNPAAMQSAKIMVF 224

Query: 523 -MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             PV+      + PA L +YW  S +   VQ  ++ + H  +  
Sbjct: 225 IFPVMMTVFSLNVPAALPLYWFTSGLFLTVQNVLLQQTHHKKKQ 268


>gi|307068652|ref|YP_003877618.1| preprotein translocase subunit YidC [Streptococcus pneumoniae
           AP200]
 gi|306410189|gb|ADM85616.1| Preprotein translocase subunit YidC [Streptococcus pneumoniae
           AP200]
          Length = 268

 Score = 99.3 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 104/248 (41%), Gaps = 27/248 (10%)

Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375
             +            ++  +   F+      F  +  F +   + G+ I+L TV ++ + 
Sbjct: 8   SLLIMTACATNGVTSDITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVL 67

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWP 432
            P+ + Q V++  M+  QP+I  LRE++     +    L++ M +++K   +      WP
Sbjct: 68  LPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWP 127

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+Q+PV  A+++ +S  ++      + WI +L + D T                    +
Sbjct: 128 ILIQMPVILALFQALSR-VDFLKTGHFLWI-NLGSVDTT-------------------LV 166

Query: 493 WPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
            PI+ ++  F+   +S       +     ++  +PV+        P G+ +YW+ SN   
Sbjct: 167 LPILAAVFTFLSTWLSNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQ 226

Query: 550 IVQQAVIM 557
           ++Q   + 
Sbjct: 227 VLQTYFLN 234


>gi|74221219|dbj|BAE42101.1| unnamed protein product [Mus musculus]
          Length = 433

 Score = 99.3 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ Y + +L   +  AI   TV  + L FPL  K     A + N  P++ 
Sbjct: 113 SYTPVGLIQNLLEYIHVDLSLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQ 172

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++     Q    +         K H+I  L      L Q PVF + +  +   
Sbjct: 173 KFSARIREAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREM 232

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + + P++++ +M+  ++
Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWCVLE 273

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         I+  MP+V +     FP+ + +YW  SNV S+ Q
Sbjct: 274 LGAETGVQSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324


>gi|262282148|ref|ZP_06059917.1| membrane protein oxaA 2 [Streptococcus sp. 2_1_36FAA]
 gi|262262602|gb|EEY81299.1| membrane protein oxaA 2 [Streptococcus sp. 2_1_36FAA]
          Length = 310

 Score = 99.3 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 99/261 (37%), Gaps = 39/261 (14%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF----PLAKKQYVSTANM 389
             + + + +A    ++  +  +L   FG+AI+L TV V+L+        +      +   
Sbjct: 35  QGFVYQFLVAPMSQVIKYFASDLGLGFGLAIILVTVIVRLIILPLGLYQSWNATYQSEKR 94

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPL--AGCWPILLQIPVFFAI 443
             + P    + E+ K +  Q  + A  Q      K + I+ L   GC P+L+Q+P F A+
Sbjct: 95  NYLSPIFTPINERMKNAETQEEKLAAQQALMAAQKENGISMLGGVGCLPLLIQMPFFSAL 154

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           +     +  +  +                    F  +           I  +++ +  +I
Sbjct: 155 FYAARYTKGIAESS-------------------FLGINLGQQSM----ILIVVVGVLYYI 191

Query: 504 QMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           Q  +S    D+ Q   +  M    P++ V    + PAG+ +YW     + I+QQ +I   
Sbjct: 192 QSLLSLVGLDEEQKEQMKKMIYVSPLMIVIFSLTAPAGVTLYWVVGGFVQILQQFIIN-- 249

Query: 560 HGAEIGLIDRLRSTFSKNYNS 580
                 +  R+   + KN   
Sbjct: 250 FFIRPYMKKRVAEEYEKNPPK 270


>gi|299783425|gb|ADJ41423.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           fermentum CECT 5716]
          Length = 290

 Score = 99.3 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 41/257 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + ++AKPM  LM +F  L GN +G AI+   V V+L+  PL   Q   +  M+     + 
Sbjct: 23  YDYLAKPMQHLMEWFAGLFGNSYGWAIVALVVVVRLILLPLMMSQMKKSTMMQERMAMLQ 82

Query: 398 ELREKFKQSPPQVLQ--------KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
                 ++   +           +AM+  YK +N++     GC P+L+Q+PVF A+Y  I
Sbjct: 83  PQMRALQERQKRAKTPEEQAAASQAMMSFYKDNNVSLTGGIGCLPLLIQLPVFSALYFAI 142

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S ++  A F+G                       L       +  I+  ++  IQ  +
Sbjct: 143 RYSPDLAQASFFG-----------------------LQLGQRSALLAIMAFVAYLIQGWL 179

Query: 508 SPPPADKGQAMIL----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           S     + Q   +       P++ +F      AGL +Y+    V +I+Q  ++       
Sbjct: 180 SMLGVPEDQKKQMRMALMMSPIMILFISWQASAGLGLYFFIGGVFAILQTWLVN---IYR 236

Query: 564 IGLIDRLRSTFSKNYNS 580
             +  ++     KN   
Sbjct: 237 PRIRKQIHEEMKKNPPK 253


>gi|225861860|ref|YP_002743369.1| membrane protein OxaA 1 [Streptococcus pneumoniae Taiwan19F-14]
 gi|225726646|gb|ACO22497.1| membrane protein OxaA 1 [Streptococcus pneumoniae Taiwan19F-14]
 gi|327389035|gb|EGE87382.1| 60Kd inner membrane family protein [Streptococcus pneumoniae
           GA04375]
 gi|332199116|gb|EGJ13196.1| 60Kd inner membrane family protein [Streptococcus pneumoniae
           GA41317]
          Length = 257

 Score = 99.3 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  +   F+      F  +  F +   + G+ I+L TV ++ +  P+ + Q V++  M+
Sbjct: 12  DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 71

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 72  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 131

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L + D T                    + PI+ ++  F+   +
Sbjct: 132 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 170

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 171 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 223


>gi|312868335|ref|ZP_07728535.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           parasanguinis F0405]
 gi|311096080|gb|EFQ54324.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus
           parasanguinis F0405]
          Length = 294

 Score = 99.3 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 83/229 (36%), Gaps = 36/229 (15%)

Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQL 418
             ++  + +  L    + K    +  M  ++P +  ++E+ K +  Q      Q+ ++  
Sbjct: 56  VTLIVRLIILPLGLYQSWKATYQSEKMNYLKPILGPIQERMKNASSQEEKLLAQQELMAA 115

Query: 419 YKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            + + ++     GC P+L+Q+P F A++     +                 AD       
Sbjct: 116 QRENGVSMFGGVGCLPLLIQMPFFSALFFAAQHTK--------------GVADS-----N 156

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL----NWMPVVFVFAL 531
           F  +    P  +   I  ++     +IQ  +S     D+ Q   +       P++     
Sbjct: 157 FLGIALGKPSLLLTAIVAVLY----YIQSMLSLHGIEDETQKESMRKASLMSPIMIGVFS 212

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
               AG+ +YW    VI I+QQ VI   +     L  R+   +  N   
Sbjct: 213 LISSAGVTLYWVVGGVIQIIQQFVIN--YLIRPNLRKRVAEEYKNNPPK 259


>gi|258655508|ref|YP_003204664.1| hypothetical protein Namu_5412 [Nakamurella multipartita DSM 44233]
 gi|258558733|gb|ACV81675.1| 60 kDa inner membrane insertion protein [Nakamurella multipartita
           DSM 44233]
          Length = 385

 Score = 98.9 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 58/295 (19%), Positives = 111/295 (37%), Gaps = 49/295 (16%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQ 382
           M  ++    +I  P+  +M  ++ +            + ++++     ++ + F    KQ
Sbjct: 1   MTFNFWSLDYIYYPVSGIMWVWHKIFGAVLGPDQAITWVLSVIFLIFTLRAILFKPFMKQ 60

Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
             S   M+ IQP++ +LREK+K    Q L + M++L K   +NPLA C P L+Q PVF  
Sbjct: 61  MESQLKMQAIQPRMKQLREKYKDDK-QRLSEEMMKLNKEAGVNPLASCLPALIQAPVFIG 119

Query: 443 IYKVIS---------------------------------ISLEMRHAPFWGWIKDLAAAD 469
           ++ V+                                   +     AP  G++   A   
Sbjct: 120 LFHVLRMFQPVNDGPGGPSVWFYRENVYFFNHADVVSMGGAKLPGGAPLVGYMTMQADQL 179

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMS-LSMFIQMKMSPPPADKGQAMIL-----NWM 523
                    I+ + +P  +  GI   + S  S+  Q +M+   A   Q  I+        
Sbjct: 180 AFMDGVREAIIWWGVPLTILAGIATHMTSRRSVARQAQMNVDAAANPQTAIMNKLMLYMF 239

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           P+  +F    FP  ++ YW  +N  +  Q  V  ++   +     ++     +  
Sbjct: 240 PLFVIFGGPFFPLAILFYWLANNSWTFGQLYVAHRIQDRKALAQAQVVEEAKEAS 294


>gi|227519877|ref|ZP_03949926.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus
           faecalis TX0104]
 gi|227072671|gb|EEI10634.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus
           faecalis TX0104]
          Length = 310

 Score = 98.9 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           + + + +      +     N   N+G AI+  T+ V+++  PL   Q   +         
Sbjct: 37  FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96

Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           I          +++   +      Q  + ++YK +N++ +   GC P+L+Q+P+F +++ 
Sbjct: 97  IKPQVDVAQAKMKQASTREEQMAAQAELQRIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  A F G   +L   +                      I   +  L+   Q 
Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193

Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            +S     + Q   +  M    P++ VF   S PAG+ +YW    + + +Q A+      
Sbjct: 194 YISMIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251

Query: 562 AEIGLIDRLRSTFSKNYNSQ 581
               +  +++     N   Q
Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271


>gi|109082863|ref|XP_001099660.1| PREDICTED: mitochondrial inner membrane protein OXA1L [Macaca
           mulatta]
          Length = 437

 Score = 98.9 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 88/231 (38%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            +     +  L+ + + +L   +  AI   TVF + L FPL        A + N  P+I 
Sbjct: 118 SHTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVVGQREAAKIHNHLPEIQ 177

Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVF----FAIYKV 446
           +   + +++               + LY K H I         L Q P+F     A+ ++
Sbjct: 178 KFSSRVREAKLAGDDTEFYKASSEMALYQKKHGIKLFKPLILPLTQAPIFLSFFIALREM 237

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
            ++ +         W +DL  +DPT                    + P++++ +M+  ++
Sbjct: 238 ANLPVASLQTGGLWWFQDLTVSDPTY-------------------VLPLVVTATMWAVLE 278

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         ++  MP++ +     FP  + IYW  SN+ S+ Q
Sbjct: 279 LGAETGVQSSDLQWMRNVIRVMPLIALPVTMHFPTAVFIYWLSSNLFSLGQ 329


>gi|15903894|ref|NP_359444.1| SpoIIIJ family protein [Streptococcus pneumoniae R6]
 gi|111658725|ref|ZP_01409362.1| hypothetical protein SpneT_02000138 [Streptococcus pneumoniae
           TIGR4]
 gi|116516129|ref|YP_817257.1| SpoIIIJ family protein [Streptococcus pneumoniae D39]
 gi|182684977|ref|YP_001836724.1| spoIIIJ family protein [Streptococcus pneumoniae CGSP14]
 gi|183603316|ref|ZP_02714133.2| membrane protein OxaA 1 [Streptococcus pneumoniae SP195]
 gi|183603675|ref|ZP_02718782.2| membrane protein OxaA 1 [Streptococcus pneumoniae CDC3059-06]
 gi|183603897|ref|ZP_02722826.2| membrane protein OxaA 1 [Streptococcus pneumoniae MLV-016]
 gi|221232758|ref|YP_002511912.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae ATCC
           700669]
 gi|225857614|ref|YP_002739125.1| membrane protein OxaA 1 [Streptococcus pneumoniae P1031]
 gi|298501539|ref|YP_003723479.1| membrane protein OxaA family protein [Streptococcus pneumoniae
           TCH8431/19A]
 gi|307128242|ref|YP_003880273.1| membrane protein OxaA 1 [Streptococcus pneumoniae 670-6B]
 gi|38503004|sp|Q8DN93|OXAA1_STRR6 RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|15459542|gb|AAL00655.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116076705|gb|ABJ54425.1| SpoIIIJ family protein [Streptococcus pneumoniae D39]
 gi|182630311|gb|ACB91259.1| spoIIIJ family protein [Streptococcus pneumoniae CGSP14]
 gi|183571669|gb|EDT92197.1| membrane protein OxaA 1 [Streptococcus pneumoniae SP195]
 gi|183575420|gb|EDT95948.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC3059-06]
 gi|183577374|gb|EDT97902.1| membrane protein OxaA 1 [Streptococcus pneumoniae MLV-016]
 gi|220675220|emb|CAR69809.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae ATCC
           700669]
 gi|225725643|gb|ACO21495.1| membrane protein OxaA 1 [Streptococcus pneumoniae P1031]
 gi|298237134|gb|ADI68265.1| membrane protein OxaA family protein [Streptococcus pneumoniae
           TCH8431/19A]
 gi|301802719|emb|CBW35488.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae INV200]
 gi|306485304|gb|ADM92173.1| membrane protein OxaA 1 [Streptococcus pneumoniae 670-6B]
          Length = 276

 Score = 98.9 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  +   F+      F  +  F +   + G+ I+L TV ++ +  P+ + Q V++  M+
Sbjct: 31  DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 90

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 91  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 150

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L + D T                    + PI+ ++  F+   +
Sbjct: 151 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 189

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 190 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242


>gi|242241497|ref|ZP_04795942.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           epidermidis W23144]
 gi|242235040|gb|EES37351.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           epidermidis W23144]
          Length = 305

 Score = 98.9 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 105/264 (39%), Gaps = 43/264 (16%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394
           +F    +PM  L+ +  N     NFG+AI++  +F++L+  P     Y ++  M+     
Sbjct: 47  FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 106

Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + ++++YK +++NP+    GC PIL+Q+P+   +Y
Sbjct: 107 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 166

Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   L   +   P + W  +L   D                         +I  +  F
Sbjct: 167 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 204

Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556
           IQ     K  P    +   M++   P++ ++      + L +YWS S +  ++Q     I
Sbjct: 205 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANI 264

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580
                A+  +   +     ++  S
Sbjct: 265 YYSKLAKKEVQPFIEKYEREHNPS 288


>gi|194466629|ref|ZP_03072616.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri
           100-23]
 gi|194453665|gb|EDX42562.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri
           100-23]
          Length = 316

 Score = 98.9 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 41/255 (16%)

Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + ++AKPM  LM +   ++  N+G AI++  V V+ +  P+   Q   +  M+    K+ 
Sbjct: 36  YDYMAKPMQHLMEWLASHMGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKMSKVQ 95

Query: 398 EL--------REKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
            L        +          + + M+ LY+ +NI+     GC P+L+Q+P+F A+Y  I
Sbjct: 96  PLIKELTEKQKAAKTPEEQAAVSQQMMALYRDNNISLTGGIGCLPLLIQLPIFAALYAAI 155

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S ++ HA F+G                   +P   P      I  ++  ++   Q  +
Sbjct: 156 RYSPDLYHATFFG-------------------IPLGKPSI----ILAVLSFIAYAAQSYL 192

Query: 508 SPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                 + Q   +    WM P +  F   +  AGL +Y+    + +I+Q  ++       
Sbjct: 193 GLVGVPEAQKKQMKAAIWMSPFMTFFISITSSAGLGLYFFIGGLFAILQTLMVN---AYR 249

Query: 564 IGLIDRLRSTFSKNY 578
             +  ++     KN 
Sbjct: 250 PRIRRQIEEESKKNP 264


>gi|315144755|gb|EFT88771.1| putative OxaA-like protein [Enterococcus faecalis TX2141]
          Length = 310

 Score = 98.9 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           + + + +      +     N   N+G AI+  T+ V+++  PL   Q   +         
Sbjct: 37  FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96

Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           I          +++   +      Q  + ++YK +N++ +   GC P+L+Q+P+F +++ 
Sbjct: 97  IKPQVDVAQAKMKQASTREEQMAAQAELQRIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  A F G   +L   +                      I   +  L+   Q 
Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193

Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            +S     + Q   +  M    P++ VF   S PAG+ +YW    + + +Q A+      
Sbjct: 194 YISMIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251

Query: 562 AEIGLIDRLRSTFSKNYNSQ 581
               +  +++     N   Q
Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271


>gi|2988415|gb|AAC08053.1| 60K inner-membrane protein homolog [Treponema pallidum]
          Length = 167

 Score = 98.9 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 50/167 (29%), Positives = 89/167 (53%), Gaps = 10/167 (5%)

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWI 462
            +   Q + + M  LY+    NPL+GC P L+Q+P+ FA+Y++ +   E R A F   WI
Sbjct: 5   YKGNTQKIHEEMAXLYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPYWI 64

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-- 520
            DL+ AD  +++TL   LP  +  +  + + P++  +S  +  K++  P  + Q   +  
Sbjct: 65  PDLSLAD--SVWTLPFALP--VTQWTQMRMLPVLYVVSQIMFSKLTQVPHTEQQKTSMTI 120

Query: 521 --NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
               MP+ F F     P+GL++YW+  N +++VQQ ++MK    +  
Sbjct: 121 MTYVMPLFFFFFFYDAPSGLLVYWTAMNGVTLVQQ-LVMKRTANKNK 166


>gi|12841194|dbj|BAB25113.1| unnamed protein product [Mus musculus]
          Length = 433

 Score = 98.9 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 86/231 (37%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ Y + +L   +  AI   TV  + L FPL  K     A + N  P++ 
Sbjct: 113 SYTPVGLIQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQ 172

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++     Q    +         K H+I  L      L   PVF + +  +   
Sbjct: 173 KFSARIREAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTHAPVFISFFIALREM 232

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + + P++++ +M+  ++
Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWCVLE 273

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         I+  MP+V +     FP+ + +YW  SNV S+ Q
Sbjct: 274 LGAETGVQSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324


>gi|169825323|ref|YP_001692934.1| hypothetical protein FMG_1626 [Finegoldia magna ATCC 29328]
 gi|302380113|ref|ZP_07268586.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna
           ACS-171-V-Col3]
 gi|303234455|ref|ZP_07321093.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna
           BVS033A4]
 gi|167832128|dbj|BAG09044.1| putative membrane protein [Finegoldia magna ATCC 29328]
 gi|302312055|gb|EFK94063.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna
           ACS-171-V-Col3]
 gi|302494410|gb|EFL54178.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna
           BVS033A4]
          Length = 243

 Score = 98.5 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 65/236 (27%), Positives = 112/236 (47%), Gaps = 42/236 (17%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           +  F I+I+L T+  KL+  P+      +      +QP++ E++ K+K   PQ  Q  M 
Sbjct: 29  ISYFAISILLLTLIYKLITLPVTIHTQKTQEQNALMQPEMKEIQRKYKN-DPQTQQLKMQ 87

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---------ISLEMRHAPFWGWIKDLAA 467
           +LYK +N NPL+GC PI+LQ+ +  A+++V+          +S     A  + WI DL  
Sbjct: 88  ELYKKYNFNPLSGCLPIILQMVLVLALFRVMREPGKYMFDNVSKINEIARNFFWIPDLTK 147

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-------KGQAMIL 520
            DP     LFG               P+I + + F+  K+S P            Q  ++
Sbjct: 148 PDPV----LFG--------------LPLINAFTQFLVAKISMPAKSKDKKSNEPDQMEMM 189

Query: 521 -----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
                 +MP+   F  S + +GLI+YW +SNVI ++ + +I   +  +  + + +R
Sbjct: 190 NKSMIYFMPIFMFFISSKYASGLILYWGFSNVIEVLIRLII--KNKDKKDVAEEVR 243


>gi|332199472|gb|EGJ13548.1| 60Kd inner membrane family protein [Streptococcus pneumoniae
           GA47901]
          Length = 257

 Score = 98.5 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  +   F+      F  +  F +   + G+ I+L TV ++ +  P+ + Q V++  M+
Sbjct: 12  DITAESADFWSKLVYFFAKIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 71

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 72  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 131

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L + D T                    + PI+ ++  F+   +
Sbjct: 132 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 170

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 171 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 223


>gi|307705714|ref|ZP_07642560.1| membrane protein oxaA 1 [Streptococcus mitis SK597]
 gi|307620728|gb|EFN99818.1| membrane protein oxaA 1 [Streptococcus mitis SK597]
          Length = 274

 Score = 98.5 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 101/233 (43%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  +   F+      F  +  F +   + G+ I+L TV ++ L  P+ + Q V++  M+
Sbjct: 29  DITANSADFWSKFVYSFAEIIRFLSFNISIGVGIILFTVLIRTLLLPVFQVQMVASRKMQ 88

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 89  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI                     L G     + PI+ ++  F+   +
Sbjct: 149 SR-VDFLKTGHFLWIN--------------------LGGVDTTLVLPILAAVFTFLSTWL 187

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P+G+ +YW+ SN   ++Q   + 
Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFGVYAPSGVALYWAVSNAYQVLQTYFLN 240


>gi|268610508|ref|ZP_06144235.1| 60 kDa inner membrane insertion protein [Ruminococcus flavefaciens
           FD-1]
          Length = 371

 Score = 98.5 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 62/304 (20%), Positives = 113/304 (37%), Gaps = 62/304 (20%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
            G +  I  P   LM   Y +  N+ ++I++ T+  +LL FP++     S+A M+ + PK
Sbjct: 2   TGLYDIIGVPFGYLMRLIYAIFKNYAVSIIVFTIVTRLLMFPVSYSTQKSSARMQLLNPK 61

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS---LE 452
           +++LR+ F  +P Q LQ+   +LY+   +NP+A C P  +Q+ + F +  V+      + 
Sbjct: 62  LEKLRKSFANNP-QRLQEEQQKLYQEEGVNPMASCLPTFIQMFLLFGVLDVVYKPLTHIL 120

Query: 453 MRHAPFWGWIKDLAAADPTNI------------------------------------FTL 476
                      ++A  DP+                                      FT+
Sbjct: 121 DMGKSVINSALEIAGVDPSKTGLRGELKIMESLAADKGKFASLGSDFVNKVYEFNQKFTI 180

Query: 477 FGILPFYLPGF---------MHVGIWPIIMSLSM----FIQMKMSPPPADKGQAM----- 518
           FG      P           + +   P +  L+     F             Q       
Sbjct: 181 FGANLGKTPTLHPETWNKEAVILAAIPFLAGLAQLLYSFYTQMHQKKVNPSMQQAGGGCM 240

Query: 519 --ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
             +L  MP+  ++   +FPAGL  YW WS++IS +    + +        I  +     +
Sbjct: 241 NVMLYGMPIFSIWMAFTFPAGLGFYWIWSSLISFIITFALNQYFT--PERIKVINEKEKE 298

Query: 577 NYNS 580
              +
Sbjct: 299 KAKA 302


>gi|15828468|ref|NP_302731.1| inner membrane protein translocase component YidC [Mycobacterium
           leprae TN]
 gi|221230945|ref|YP_002504361.1| putative inner membrane protein translocase component YidC
           [Mycobacterium leprae Br4923]
 gi|38502903|sp|Q50205|OXAA_MYCLE RecName: Full=Membrane protein oxaA
 gi|13093898|emb|CAC32242.1| putative conserved membrane protein [Mycobacterium leprae]
 gi|219934052|emb|CAR72810.1| putative conserved membrane protein [Mycobacterium leprae Br4923]
          Length = 380

 Score = 98.5 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/290 (17%), Positives = 99/290 (34%), Gaps = 42/290 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            +++     +               +    + +++M     ++ L +    +Q  +T  M
Sbjct: 11  LDIVYYPVSWIMWVWYKLFAAVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 70

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP+I  L+ K+     Q +   M +L + H  NP+ GC P+L QIPVF  +Y  +  
Sbjct: 71  QELQPRIRALQRKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHALRS 129

Query: 450 ---SLEMRHAPFW-------------------------GWIKDLAAADPTNIFTLFGILP 481
              +      P                            W   + A   T    L   + 
Sbjct: 130 FNRTTGGFGQPHMSVTENRMTGNYVFTPVDVGHFLDANLWGAPIGAY-MTQRSGLDAFID 188

Query: 482 FYLPGFMHVGI-WPIIMSLSMFIQMKMS----------PPPADKGQAMILNWMPVVFVFA 530
           F  P  + VGI   ++  ++ +   + S           P       + L   P   V  
Sbjct: 189 FSRPAVILVGIPMMVLAGVATYFNSRASIARQSAEAAENPQTALMNKIALYVFPFGVVVG 248

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
               P  +I+YW  +N+ +  QQ  +  M   E     + ++   +  N+
Sbjct: 249 GPFLPLAIILYWFSNNIWTFGQQHYVFSMIEKEDEAKKQ-KAIERRTANA 297


>gi|150021506|ref|YP_001306860.1| 60 kDa inner membrane insertion protein [Thermosipho melanesiensis
           BI429]
 gi|149794027|gb|ABR31475.1| 60 kDa inner membrane insertion protein [Thermosipho melanesiensis
           BI429]
          Length = 433

 Score = 98.5 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 61/291 (20%), Positives = 121/291 (41%), Gaps = 26/291 (8%)

Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325
           +     +    +   G      KFS   +     K       ++ G  +   I     D 
Sbjct: 138 NDRLKNNIFLSFYEKGDILSIIKFSGKTLGGNKVKGANLRFLVYIGPYKKTLIKSGFSDD 197

Query: 326 AIPRFEMLIDW----GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381
                EML       GWF FI  P+     +  +   NFG+ I++ T+ ++ + +PL   
Sbjct: 198 YEVILEMLKTISGVGGWFDFILYPLVYFFGWINDFTKNFGLTIIVFTIIIRFVLYPLYHS 257

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
           Q  S   M+ +QP ++++++K+K    Q  Q+ +++ Y+ + INP +GC   L+Q+P+F 
Sbjct: 258 QTKSMIKMRKLQPIVEQIKKKYKDP--QKQQQELLKAYRENKINPASGCLMALVQLPIFI 315

Query: 442 AIYKVISISLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            +Y+VI    E    +  +   +DL A           ++   + G+    I        
Sbjct: 316 ILYQVIRYYQEEFAFSGKFLIWRDLTAG--GFSANWVFLIIQIVAGYYLALIT------- 366

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
                  S       Q++I+++   +F F     P+G+ +Y++ + +I + 
Sbjct: 367 -------SQDTRTAWQSIIMSF---IFPFLFIGLPSGVFLYYTANTLIQVG 407


>gi|146319668|ref|YP_001199380.1| hypothetical protein SSU05_2014 [Streptococcus suis 05ZYH33]
 gi|146321863|ref|YP_001201574.1| hypothetical protein SSU98_2016 [Streptococcus suis 98HAH33]
 gi|253752665|ref|YP_003025806.1| membrane protein OxaA 1 precursor [Streptococcus suis SC84]
 gi|253754491|ref|YP_003027632.1| membrane protein OxaA 1 precursor [Streptococcus suis P1/7]
 gi|253756424|ref|YP_003029564.1| membrane protein OxaA 1 precursor [Streptococcus suis BM407]
 gi|166977421|sp|A4W485|OXAA_STRS2 RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|145690474|gb|ABP90980.1| conserved hypothetical protein [Streptococcus suis 05ZYH33]
 gi|145692669|gb|ABP93174.1| conserved hypothetical protein [Streptococcus suis 98HAH33]
 gi|251816954|emb|CAZ52603.1| membrane protein OxaA 1 precursor [Streptococcus suis SC84]
 gi|251818888|emb|CAZ56731.1| membrane protein OxaA 1 precursor [Streptococcus suis BM407]
 gi|251820737|emb|CAR47499.1| membrane protein OxaA 1 precursor [Streptococcus suis P1/7]
 gi|292559284|gb|ADE32285.1| Hypothetical protein SSGZ1_1829 [Streptococcus suis GZ1]
 gi|319759082|gb|ADV71024.1| hypothetical protein SSUJS14_1975 [Streptococcus suis JS14]
          Length = 270

 Score = 98.5 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 103/253 (40%), Gaps = 28/253 (11%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
                 +  +      ++ +        GI I+L T+ ++ L  PL + Q  S+  M+ +
Sbjct: 28  SQSTDAWDRLIYWFASIIQFLSINGQ-IGIGIILFTILIRTLLLPLFQIQMNSSRKMQEL 86

Query: 393 QPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           QP++ +L+ ++  +     Q L +A   LYK + ++  A   P+ +Q+P+  A+++ ++ 
Sbjct: 87  QPQLKKLQAEYPGTDMESRQQLYEATQALYKENGVSMRASMIPLFIQMPILLALFQALTR 146

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
            +E      + W+ +L   DP                     I PI+ ++  F+   ++ 
Sbjct: 147 -VEALKVGHFLWL-NLGEPDPFF-------------------ILPILAAVFTFLSSWLTN 185

Query: 510 PPA--DKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
             A        I+ + MPV+  F   +  +G+ +YW+ SN   + Q  V           
Sbjct: 186 KSAIEKNMAMTIMTYVMPVMIFFFAVAAASGVALYWTVSNAYQVAQTLVFNNPFKIIAER 245

Query: 567 IDRLRSTFSKNYN 579
             ++ +   +   
Sbjct: 246 QAKIDAEKERQAK 258


>gi|169832952|ref|YP_001695392.1| membrane protein OxaA 1 [Streptococcus pneumoniae Hungary19A-6]
 gi|168995454|gb|ACA36066.1| membrane protein OxaA 1 [Streptococcus pneumoniae Hungary19A-6]
          Length = 276

 Score = 98.5 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  +   F+      F  +  F +   + G+ I+L T+ ++ +  P+ + Q V++  M+
Sbjct: 31  DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTILIRTVLLPVFQVQMVASRKMQ 90

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 91  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 150

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L + D T                    + PI+ ++  F+   +
Sbjct: 151 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 189

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 190 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242


>gi|227904438|ref|ZP_04022243.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           acidophilus ATCC 4796]
 gi|227867813|gb|EEJ75234.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           acidophilus ATCC 4796]
          Length = 322

 Score = 98.5 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 95/254 (37%), Gaps = 35/254 (13%)

Query: 339 FYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           + ++ +P+  +M    +++      G  I++ T  V+L+  PL   Q   +   +    +
Sbjct: 43  YQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQEKMAR 102

Query: 396 IDELREKFKQSPPQVLQKAMI---------QLYKTHNINPL--AGCWPILLQIPVFFAIY 444
           +    +  + +                   +LY  + ++     GC P+L+Q+P+ + IY
Sbjct: 103 LQPQMKLIQNAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGIGCLPLLIQLPIMWGIY 162

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           + +  S E+ H+ F+G                   +       +   I  +   +  +I 
Sbjct: 163 QAVFYSQELAHSTFFG-------------------ISLSQKSVVLAIIATVFTVIQGYIS 203

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
               P    K    ++ + P++ +F   SF   L +YW+  N + I+QQ ++  +     
Sbjct: 204 TISIPEEQKKTMQSMMLFNPIMTLFFSLSFSGALALYWAAGNFVMIIQQLIVTFILT--P 261

Query: 565 GLIDRLRSTFSKNY 578
            +   +     +  
Sbjct: 262 KVKQHVADELKEKP 275


>gi|194398180|ref|YP_002038622.1| SpoIIIJ family protein [Streptococcus pneumoniae G54]
 gi|194357847|gb|ACF56295.1| SpoIIIJ family protein [Streptococcus pneumoniae G54]
          Length = 274

 Score = 98.5 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  +   F+      F  +  F +   + G+ I+L TV ++ +  P+ + Q V++  M+
Sbjct: 29  DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 88

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 89  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L + D T                    + PI+ ++  F+   +
Sbjct: 149 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 187

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240


>gi|169334989|ref|ZP_02862182.1| hypothetical protein ANASTE_01395 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257727|gb|EDS71693.1| hypothetical protein ANASTE_01395 [Anaerofustis stercorihominis DSM
           17244]
          Length = 249

 Score = 98.5 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 65/230 (28%), Positives = 118/230 (51%), Gaps = 17/230 (7%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
                ++ + YN VG++G+AI+L  +F KL+  P++ KQ  ST  MK I P++ +++EKF
Sbjct: 1   MLFGKVLLFIYNFVGSYGLAIILFALFAKLILLPISYKQIKSTQIMKVINPEVQKVQEKF 60

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE------MRHAP 457
           K    +   + M ++Y+ +N NP++GC P+ LQ P+   ++ VI           M+H  
Sbjct: 61  KNDKAK-QGEEMWKVYEKYNYNPMSGCLPLFLQFPIIIGLFGVIRQPEAYVFIDGMKHVS 119

Query: 458 F-WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
             + WIKD++     +   +     F LP F+ + I P+I  ++ +IQ K +        
Sbjct: 120 MSFLWIKDISV----SALDIARANGFALPTFLAM-IIPLINVIATYIQQKQATANQATEM 174

Query: 517 ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
                M+ N M ++  +   +FP  L IYW+ + ++ I+Q  ++ K    
Sbjct: 175 GGTMQMMNNMMTLMIGWMSLTFPGALSIYWASTTILGILQTEIMYKFMPI 224


>gi|213966247|ref|ZP_03394431.1| preprotein translocase YidC subunit [Corynebacterium amycolatum
           SK46]
 gi|213951099|gb|EEB62497.1| preprotein translocase YidC subunit [Corynebacterium amycolatum
           SK46]
          Length = 382

 Score = 98.5 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 111/283 (39%), Gaps = 65/283 (22%)

Query: 338 WFYFIAKPMFMLMSYFYNL---------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              F+  P+  ++ +++             ++ +AI+L  V +++L F     Q  S   
Sbjct: 1   MLNFVYWPISAILWFWHKASGFLFDPSSGISWVLAIILLVVTIRILLFKPMLNQQRSAIK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ + P++  ++EK+K    Q    AM QL K   +NPL GC PIL+Q+PVF  ++ V+ 
Sbjct: 61  MQQLAPEMQAIKEKYKN-DQQAQALAMRQLQKEMGVNPLGGCLPILVQMPVFIGLFHVLR 119

Query: 449 I-------------SLEM-RHAPFWGWIKD----------LAAA---------DPTNIFT 475
                         S+E   + P + +  D          L A          D    FT
Sbjct: 120 SFNRTGTSGNALGMSVEQNWNTPNYIFGVDEVRSFLLARVLNAPLSSSVGMGEDQYAAFT 179

Query: 476 LFGILPFYLPGFMHVGIWP--IIMSLSMFIQMKMS--------------------PPPAD 513
           + G    +    + +   P  +I +L+     +MS                        D
Sbjct: 180 VPGTPADFTRMDIMIVAIPLIVIAALATHFNARMSVERTRARQEAGLVKRQEGPMGQQMD 239

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
               M+L + P++ +   + +  GL++Y   +NV +  QQ  I
Sbjct: 240 MMNKMMLWFFPIMILVTGAFWHIGLLVYMVTNNVWTYFQQRYI 282


>gi|148544447|ref|YP_001271817.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM
           20016]
 gi|184153811|ref|YP_001842152.1| hypothetical protein LAR_1156 [Lactobacillus reuteri JCM 1112]
 gi|227363125|ref|ZP_03847260.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           reuteri MM2-3]
 gi|325682769|ref|ZP_08162285.1| membrane protein OxaA 2 [Lactobacillus reuteri MM4-1A]
 gi|148531481|gb|ABQ83480.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM
           20016]
 gi|183225155|dbj|BAG25672.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
 gi|227071843|gb|EEI10131.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           reuteri MM2-3]
 gi|324977119|gb|EGC14070.1| membrane protein OxaA 2 [Lactobacillus reuteri MM4-1A]
          Length = 316

 Score = 98.5 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 41/255 (16%)

Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + ++AKPM  LM +   ++  N+G AI++  V V+ +  P+   Q   +  M+    K+ 
Sbjct: 36  YDYMAKPMQHLMEWLASHMGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKMSKVQ 95

Query: 398 EL--------REKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
            L        +          + + M+ LY+ +NI+     GC P+L+Q+P+F A+Y  I
Sbjct: 96  PLIKELTEKQKAAKTPEEQAAVSQQMMALYRDNNISLTGGIGCLPLLIQLPIFAALYAAI 155

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S ++ HA F+G                   +P   P      I  ++  ++   Q  +
Sbjct: 156 RYSPDLYHATFFG-------------------IPLGKPSI----ILAVLSFIAYAAQSYL 192

Query: 508 SPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                 + Q   +    WM P +  F   +  AGL +Y+    + +I+Q  ++       
Sbjct: 193 GLVGVPEAQKKQMKAAIWMSPFMTFFISITSSAGLGLYFFIGGLFAILQTLMVN---AYR 249

Query: 564 IGLIDRLRSTFSKNY 578
             +  ++     KN 
Sbjct: 250 PRIRRQIEEESKKNP 264


>gi|15901862|ref|NP_346466.1| SpoIIIJ family protein [Streptococcus pneumoniae TIGR4]
 gi|148989738|ref|ZP_01821047.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae
           SP6-BS73]
 gi|148992121|ref|ZP_01821895.1| SpoIIIJ family protein [Streptococcus pneumoniae SP9-BS68]
 gi|148998805|ref|ZP_01826242.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae
           SP11-BS70]
 gi|149007810|ref|ZP_01831406.1| SpoIIIJ family protein [Streptococcus pneumoniae SP18-BS74]
 gi|149011894|ref|ZP_01833042.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae
           SP19-BS75]
 gi|149023609|ref|ZP_01836112.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae
           SP23-BS72]
 gi|168484114|ref|ZP_02709066.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1873-00]
 gi|168487013|ref|ZP_02711521.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1087-00]
 gi|168492462|ref|ZP_02716605.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC0288-04]
 gi|298229605|ref|ZP_06963286.1| membrane protein OxaA 1 [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254931|ref|ZP_06978517.1| membrane protein OxaA 1 [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|303260531|ref|ZP_07346498.1| spoIIIJ family protein [Streptococcus pneumoniae SP-BS293]
 gi|303262888|ref|ZP_07348824.1| spoIIIJ family protein [Streptococcus pneumoniae SP14-BS292]
 gi|303265199|ref|ZP_07351111.1| spoIIIJ family protein [Streptococcus pneumoniae BS397]
 gi|303266566|ref|ZP_07352452.1| spoIIIJ family protein [Streptococcus pneumoniae BS457]
 gi|303268650|ref|ZP_07354441.1| spoIIIJ family protein [Streptococcus pneumoniae BS458]
 gi|38503144|sp|Q97NI6|OXAA1_STRPN RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|14973552|gb|AAK76106.1| SpoIIIJ family protein [Streptococcus pneumoniae TIGR4]
 gi|147755366|gb|EDK62416.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae
           SP11-BS70]
 gi|147760660|gb|EDK67633.1| SpoIIIJ family protein [Streptococcus pneumoniae SP18-BS74]
 gi|147763849|gb|EDK70782.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae
           SP19-BS75]
 gi|147924854|gb|EDK75937.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae
           SP6-BS73]
 gi|147929170|gb|EDK80181.1| SpoIIIJ family protein [Streptococcus pneumoniae SP9-BS68]
 gi|147929708|gb|EDK80699.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae
           SP23-BS72]
 gi|172042591|gb|EDT50637.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1873-00]
 gi|183570087|gb|EDT90615.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1087-00]
 gi|183573390|gb|EDT93918.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC0288-04]
 gi|302635971|gb|EFL66470.1| spoIIIJ family protein [Streptococcus pneumoniae SP14-BS292]
 gi|302638329|gb|EFL68797.1| spoIIIJ family protein [Streptococcus pneumoniae SP-BS293]
 gi|302641815|gb|EFL72171.1| spoIIIJ family protein [Streptococcus pneumoniae BS458]
 gi|302643903|gb|EFL74164.1| spoIIIJ family protein [Streptococcus pneumoniae BS457]
 gi|302645280|gb|EFL75515.1| spoIIIJ family protein [Streptococcus pneumoniae BS397]
 gi|332071754|gb|EGI82246.1| 60Kd inner membrane family protein [Streptococcus pneumoniae
           GA17545]
 gi|332071835|gb|EGI82325.1| 60Kd inner membrane family protein [Streptococcus pneumoniae
           GA17570]
 gi|332199188|gb|EGJ13267.1| 60Kd inner membrane family protein [Streptococcus pneumoniae
           GA47368]
          Length = 274

 Score = 98.5 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  +   F+      F  +  F +   + G+ I+L TV ++ +  P+ + Q V++  M+
Sbjct: 29  DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 88

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 89  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L + D T                    + PI+ ++  F+   +
Sbjct: 149 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 187

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240


>gi|58337788|ref|YP_194373.1| family protein [Lactobacillus acidophilus NCFM]
 gi|58255105|gb|AAV43342.1| putative family protein [Lactobacillus acidophilus NCFM]
          Length = 322

 Score = 98.1 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 97/254 (38%), Gaps = 35/254 (13%)

Query: 339 FYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           + ++ +P+  +M    +++      G  I++ T  V+L+  PL   Q   +   +    +
Sbjct: 43  YQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQEKMAR 102

Query: 396 IDELREKFKQSPPQVLQK--AMI-------QLYKTHNINPL--AGCWPILLQIPVFFAIY 444
           +    +  + +           +       +LY  + ++     GC P+L+Q+P+ + IY
Sbjct: 103 LQPQMKLIQNAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGIGCLPLLIQLPIMWGIY 162

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           + +  S E+ H+ F+G                   +       +   I  +   +  +I 
Sbjct: 163 QAVFYSQELAHSTFFG-------------------ISLSQKSVVLAIIATVFTVIQGYIS 203

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
               P    K    ++ + P++ +F   SF   L +YW+  N + I+QQ ++  +   ++
Sbjct: 204 TIGIPEEQKKTMQSMMLFNPIMTLFFSLSFSGALALYWAAGNFVMIIQQLIVTFILTPKV 263

Query: 565 GLIDRLRSTFSKNY 578
                +     +  
Sbjct: 264 K--QHVADELKEKP 275


>gi|225855530|ref|YP_002737042.1| membrane protein OxaA 1 [Streptococcus pneumoniae JJA]
 gi|225724047|gb|ACO19900.1| membrane protein OxaA 1 [Streptococcus pneumoniae JJA]
 gi|301794976|emb|CBW37440.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae INV104]
          Length = 276

 Score = 98.1 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  +   F+      F  +  F +   + G+ I+L TV ++ +  P+ + Q V++  M+
Sbjct: 31  DITAESADFWSKLVYFFAKIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 90

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 91  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 150

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L + D T                    + PI+ ++  F+   +
Sbjct: 151 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 189

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 190 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242


>gi|227543950|ref|ZP_03973999.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           reuteri CF48-3A]
 gi|300909700|ref|ZP_07127161.1| membrane protein OxaA 2 [Lactobacillus reuteri SD2112]
 gi|68160786|gb|AAY86839.1| lr0974 [Lactobacillus reuteri]
 gi|227186066|gb|EEI66137.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           reuteri CF48-3A]
 gi|300893565|gb|EFK86924.1| membrane protein OxaA 2 [Lactobacillus reuteri SD2112]
          Length = 316

 Score = 98.1 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 41/255 (16%)

Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + ++AKPM  LM +   ++  N+G AI++  V V+ +  P+   Q   +  M+    K+ 
Sbjct: 36  YDYMAKPMQHLMEWLASHMGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKMSKVQ 95

Query: 398 EL--------REKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
            L        +          + + M+ LY+ +NI+     GC P+L+Q+P+F A+Y  I
Sbjct: 96  PLIKELTEKQKAAKTPEEQAAVSQQMMALYRDNNISLTGGIGCLPLLIQLPIFAALYAAI 155

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S ++ HA F+G                   +P   P      I  ++  ++   Q  +
Sbjct: 156 RYSPDLYHATFFG-------------------IPLGKPSI----ILAVLSFIAYAAQSYL 192

Query: 508 SPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                 + Q   +    WM P +  F   +  AGL +Y+    + +I+Q  ++       
Sbjct: 193 GLVGVPEAQKKQMKAAIWMSPFMTFFISITSSAGLGLYFFIGGLFAILQTLMVN---AYR 249

Query: 564 IGLIDRLRSTFSKNY 578
             +  ++     KN 
Sbjct: 250 PRIRRQIEEESKKNP 264


>gi|303254945|ref|ZP_07341026.1| SpoIIIJ family protein [Streptococcus pneumoniae BS455]
 gi|302598081|gb|EFL65146.1| SpoIIIJ family protein [Streptococcus pneumoniae BS455]
          Length = 274

 Score = 98.1 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  +   F+      F  +  F +   + G+ I+L TV ++ +  P+ + Q V++  M+
Sbjct: 29  DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 88

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 89  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L + D T                    + PI+ ++  F+   +
Sbjct: 149 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 187

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVTLYWTVSNAYQVLQTYFLN 240


>gi|148704410|gb|EDL36357.1| oxidase assembly 1-like, isoform CRA_a [Mus musculus]
          Length = 351

 Score = 98.1 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 79/209 (37%), Gaps = 35/209 (16%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-- 417
           +  AI   TV  + L FPL  K     A + N  P++ +   + +++     Q    +  
Sbjct: 53  WWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQAEFYKAT 112

Query: 418 -----LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAA 468
                  K H+I  L      L Q PVF + +  +     +           W +DL  +
Sbjct: 113 IEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVPSLQTGGLWWFQDLTVS 172

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----QAMILNWM 523
           DP                   + + P++++ +M+  +++      +         I+  M
Sbjct: 173 DP-------------------IYVLPLVVTATMWCVLELGAETGVQSNDLQFMRNIIRVM 213

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           P+V +     FP+ + +YW  SNV S+ Q
Sbjct: 214 PLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 242


>gi|308174180|ref|YP_003920885.1| Sec-independent factor for membrane protein insertion [Bacillus
           amyloliquefaciens DSM 7]
 gi|307607044|emb|CBI43415.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ
           family) [Bacillus amyloliquefaciens DSM 7]
 gi|328554124|gb|AEB24616.1| OxaA-like protein precursor [Bacillus amyloliquefaciens TA208]
 gi|328912515|gb|AEB64111.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ
           family) [Bacillus amyloliquefaciens LL3]
          Length = 278

 Score = 98.1 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 92/224 (41%), Gaps = 30/224 (13%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE--------LREKFKQSP 407
             G +G++I+L T+ V+++  PL   Q+      +     I          +++      
Sbjct: 61  FHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRVFQEKMAVIKPQVDSIQAKMKKTKDAEK 120

Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            + LQ  M++LY+ HN+NP+  GC P+L+Q P+    Y  I  + E+             
Sbjct: 121 QKELQMEMMKLYREHNLNPMAMGCLPMLVQFPILIGFYYAIRSTPEIA------------ 168

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSMFIQMKMSPPPADK--GQ-AMILNW 522
               ++ F  F +    +   +  G    +   +S  +  K SP   +    Q A I+ +
Sbjct: 169 ----SHSFLWFSLGHSDMLVSLCAGAMYFLQAYVSQKLNEKYSPAAQNPAAMQSAKIMVF 224

Query: 523 -MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             PV+      + PA L +YW  S +   VQ  ++ + H  +  
Sbjct: 225 IFPVMMTVFSLNVPAALPLYWFTSGLFLTVQNVLLQQTHHKKKQ 268


>gi|205373230|ref|ZP_03226034.1| membrane protein oxaA precursor [Bacillus coahuilensis m4-4]
          Length = 253

 Score = 97.8 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 36/245 (14%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK------- 390
           +  F+     +L      L GNFG+AI++ T+ ++L+  P   K + +   MK       
Sbjct: 30  YDTFVFPFAKLLEWLGNTLGGNFGLAIIIITIIIRLVLMPFMLKTFKNQQEMKGKMDKLK 89

Query: 391 -NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVIS 448
             +Q    +L+E       + LQ+ M+QLY+ H +NPL  GC P+++Q+P+   +Y  I 
Sbjct: 90  PEMQEIQKKLKETKDTEEQRKLQQEMMQLYQKHGVNPLNMGCLPLIIQMPILLGLYYAII 149

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
            S ++     + W            F L               I  +I  +  F Q K+S
Sbjct: 150 GSPDIA-THTFLW------------FNLGEAN----------IIMALIAGVVYFGQAKVS 186

Query: 509 P---PPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
                     Q  I++++ PV+ +    + PA L +YW+   V  I Q     K + AE 
Sbjct: 187 LIGIAEEQLQQMKIISYLSPVMILIFSLNAPAALPLYWTVGGVFVIGQTLFAKKYYQAEP 246

Query: 565 GLIDR 569
            L + 
Sbjct: 247 TLNEE 251


>gi|251812194|ref|ZP_04826667.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|251804291|gb|EES56948.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           epidermidis BCM-HMP0060]
          Length = 305

 Score = 97.8 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 105/264 (39%), Gaps = 43/264 (16%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394
           +F    +PM  L+ +  N     NFG+AI++  +F++L+  P     Y ++  M+     
Sbjct: 47  FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 106

Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + ++++YK +++NP+    GC PIL+Q+P+   +Y
Sbjct: 107 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 166

Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   L   +   P + W  +L   D                         +I  +  F
Sbjct: 167 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 204

Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556
           IQ     K  P    +   M++   P++ ++      + L +YWS S +  ++Q     +
Sbjct: 205 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANV 264

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580
                A+  +   +     ++  S
Sbjct: 265 YYSKLAKKEVQPFIEKYEREHNPS 288


>gi|293366055|ref|ZP_06612743.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291319778|gb|EFE60136.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 305

 Score = 97.8 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 104/263 (39%), Gaps = 43/263 (16%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394
           +F    +PM  L+ +  N     NFG+AI++  +F++L+  P     Y ++  M+     
Sbjct: 47  FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 106

Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + ++++YK +++NP+    GC PIL+Q+P+   +Y
Sbjct: 107 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 166

Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   L   +   P + W  +L   D                         +I  +  F
Sbjct: 167 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 204

Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556
           IQ     K  P    +   M++   P++ ++      + L +YWS S +  ++Q     I
Sbjct: 205 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANI 264

Query: 557 MKMHGAEIGLIDRLRSTFSKNYN 579
                A+  +   +     ++  
Sbjct: 265 YYSKLAKKEVQPFIEKYEREHNP 287


>gi|293387301|ref|ZP_06631858.1| SpoJ protein [Enterococcus faecalis S613]
 gi|291083338|gb|EFE20301.1| SpoJ protein [Enterococcus faecalis S613]
          Length = 292

 Score = 97.8 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           + + + +      +     N   N+G AI+  T+ V+++  PL   Q   +         
Sbjct: 37  FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96

Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
           I          +++   +      Q  + ++YK +N++ +   GC P+L+Q+P+F +++ 
Sbjct: 97  IKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  A F G   +L   +                      I   +  L+   Q 
Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193

Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            +S     + Q   +  M    P++ VF   S PAG+ +YW    + + +Q A+      
Sbjct: 194 YISMIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251

Query: 562 AEIGLIDRLRSTFSKNYNSQ 581
               +  +++     N   Q
Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271


>gi|274318365|ref|NP_001162055.1| oxidase assembly 1-like [Rattus norvegicus]
 gi|149063882|gb|EDM14152.1| rCG23545, isoform CRA_c [Rattus norvegicus]
          Length = 433

 Score = 97.8 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 86/231 (37%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ Y + +L   +  AI   TV  + L FPL  K     A + N  P++ 
Sbjct: 113 SYTPVGLIQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQ 172

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++     Q    +         K H+I         L Q P+F + +  +   
Sbjct: 173 KFSARIREAKLSGDQAEFYKATIEMTHYQKKHDIKFFRPLILPLTQAPIFISFFIALREM 232

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF---- 502
             +           W +DL  +DP                   + + P++++ +M+    
Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWGVLE 273

Query: 503 IQMKMSPPPAD-KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +  +     +D +    ++  MP+  +     FP+ + +YW  SNV S+ Q
Sbjct: 274 LGAETGMQSSDLQLMRNVIRVMPLAVLPVTIHFPSAVFMYWLSSNVFSLCQ 324


>gi|307707727|ref|ZP_07644206.1| membrane protein OxaA 1 [Streptococcus mitis NCTC 12261]
 gi|307616225|gb|EFN95419.1| membrane protein OxaA 1 [Streptococcus mitis NCTC 12261]
          Length = 274

 Score = 97.8 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 100/233 (42%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  D   F+      F  +  F +   + G+ I+L T+ ++ +  P+ + Q V++  M+
Sbjct: 29  DITADSTDFWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTVLLPVFQVQMVASRKMQ 88

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 89  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI                     L G     + PI+ ++  F+   +
Sbjct: 149 SR-VDFLKTGHFLWIN--------------------LGGVDTTLVLPILAAVFTFLSTWL 187

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240


>gi|227890587|ref|ZP_04008392.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           salivarius ATCC 11741]
 gi|227867525|gb|EEJ74946.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           salivarius ATCC 11741]
 gi|300214345|gb|ADJ78761.1| 60 kDa inner membrane protein [Lactobacillus salivarius CECT 5713]
          Length = 307

 Score = 97.8 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 97/254 (38%), Gaps = 33/254 (12%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +  +A P   L+ +    L G++G +I++ T  V+L+  P+   Q       +     I 
Sbjct: 37  YEKLAIPTQHLLEWLSGVLGGSYGWSIIVITFIVRLIMMPIMINQSKKATIQQEKIAMIR 96

Query: 398 ELREKFKQS--------PPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
               K ++               +AM++LY+ +NI+ +   GC P+L+Q+P+F A+Y  I
Sbjct: 97  PQLAKIQEQQKNAKTPEERNAASQAMMKLYQENNISMVGGIGCLPLLIQMPIFAALYAAI 156

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S E+                     T F  +      F  V +  +I +L  ++    
Sbjct: 157 QYSPEL-------------------SKTTFMGINLGHRSFTFVVLTFVIYALQGWLSTLG 197

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
            P    K    ++   PV+        PAGL +Y+    + + +Q  +I  M      + 
Sbjct: 198 LPEEQKKQMQSMIIVSPVMLTGMTYISPAGLGLYFFIGGIFACIQTLIINFM---RPRIR 254

Query: 568 DRLRSTFSKNYNSQ 581
             ++         +
Sbjct: 255 KDIKKELKNKPIKE 268


>gi|149063883|gb|EDM14153.1| rCG23545, isoform CRA_d [Rattus norvegicus]
          Length = 411

 Score = 97.8 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 80/218 (36%), Gaps = 35/218 (16%)

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
             F  L   +  AI   TV  + L FPL  K     A + N  P++ +   + +++    
Sbjct: 104 QSFAELGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLSG 163

Query: 411 LQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFW 459
            Q    +         K H+I         L Q P+F + +  +     +          
Sbjct: 164 DQAEFYKATIEMTHYQKKHDIKFFRPLILPLTQAPIFISFFIALREMANLPVPSLQTGGL 223

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF----IQMKMSPPPAD-K 514
            W +DL  +DP                   + + P++++ +M+    +  +     +D +
Sbjct: 224 WWFQDLTVSDP-------------------IYVLPLVVTATMWGVLELGAETGMQSSDLQ 264

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
               ++  MP+  +     FP+ + +YW  SNV S+ Q
Sbjct: 265 LMRNVIRVMPLAVLPVTIHFPSAVFMYWLSSNVFSLCQ 302


>gi|289434661|ref|YP_003464533.1| SpoJ family translocase subunit [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|289170905|emb|CBH27447.1| SpoJ family translocase subunit [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 275

 Score = 97.8 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 97/251 (38%), Gaps = 36/251 (14%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393
            Y I      +M     +  N+G+AI++TT+ ++ L  PL  +   +   M++       
Sbjct: 36  TYLIQPFTSFIMFVASFVGDNYGVAIIITTLIIRALIMPLNMRTAKAQMGMQSKMAVAKP 95

Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449
                   L+    +     +QK M+ +Y  +NINP+  GC P+L+Q+P+  A Y  I  
Sbjct: 96  EIDEIQARLKRATSKEEQATIQKEMMTVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S E+     + W  +L + D                      +  +I  L    Q  +S 
Sbjct: 156 SSEIASHS-FLWF-NLGSPDM---------------------VLAVIAGLVYLAQYFVSM 192

Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
                 Q   +  +    P++ +F   + P+ L +YW+   +    Q  +  K++  +  
Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHP 252

Query: 566 LIDRLRSTFSK 576
            +  +     +
Sbjct: 253 EVKIMEQEEKE 263


>gi|237650612|ref|ZP_04524864.1| membrane protein OxaA 1 [Streptococcus pneumoniae CCRI 1974]
 gi|237821072|ref|ZP_04596917.1| membrane protein OxaA 1 [Streptococcus pneumoniae CCRI 1974M2]
          Length = 274

 Score = 97.8 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  +   F+      F  +  F +   + G+ I+L TV ++ +  P+ + Q V++  M+
Sbjct: 29  DITAESADFWSKLVYFFAKIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 88

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 89  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L + D T                    + PI+ ++  F+   +
Sbjct: 149 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 187

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240


>gi|301800797|emb|CBW33449.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae OXC141]
          Length = 276

 Score = 97.8 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  +   F+      F  +  F +   + G+ I+L TV ++ +  P+ + Q V++  M+
Sbjct: 31  DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 90

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 91  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 150

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L + D T                    + PI+ ++  F+   +
Sbjct: 151 SR-VDFLKTGQFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 189

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 190 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242


>gi|90961500|ref|YP_535416.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118]
 gi|90820694|gb|ABD99333.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118]
          Length = 307

 Score = 97.8 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 97/254 (38%), Gaps = 33/254 (12%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +  +A P   L+ +    L G++G +I++ T  V+L+  P+   Q       +     I 
Sbjct: 37  YEKLAMPTQHLLEWLSGVLGGSYGWSIIVITFIVRLIMMPIMINQSKKATIQQEKIAMIR 96

Query: 398 ELREKFKQS--------PPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
               K ++               +AM++LY+ +NI+ +   GC P+L+Q+P+F A+Y  I
Sbjct: 97  PQLAKIQEQQKNAKTPEERNAASQAMMKLYQENNISMVGGIGCLPLLIQMPIFAALYAAI 156

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S E+                     T F  +      F  V +  +I +L  ++    
Sbjct: 157 QYSPEL-------------------SKTTFMGINLGHRSFTFVVLTFVIYALQGWLSTLG 197

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
            P    K    ++   PV+        PAGL +Y+    + + +Q  +I  M      + 
Sbjct: 198 LPEEQKKQMQSMIIVSPVMLTGMTYISPAGLGLYFFIGGIFACIQTLIINFM---RPRIR 254

Query: 568 DRLRSTFSKNYNSQ 581
             ++         +
Sbjct: 255 KDIKKELKNKPIKE 268


>gi|289167102|ref|YP_003445369.1| oxaA1 [Streptococcus mitis B6]
 gi|288906667|emb|CBJ21501.1| oxaA1 [Streptococcus mitis B6]
          Length = 276

 Score = 97.8 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 100/233 (42%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  D   F+      F  +  F +   + G+ I+L TV ++ +  P+ + Q V++  M+
Sbjct: 31  DITADSADFWSKFVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 90

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 91  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 150

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI                     L G     + P++ ++  F+   +
Sbjct: 151 SR-VDFLKTGHFLWIN--------------------LGGVDTTLVLPVLAAVFTFLSTWL 189

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 190 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242


>gi|332222935|ref|XP_003260624.1| PREDICTED: mitochondrial inner membrane protein OXA1L [Nomascus
           leucogenys]
          Length = 436

 Score = 97.8 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 82/231 (35%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ + + +L   +  AI   TVF + L FPL        A + N  P+I 
Sbjct: 118 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 177

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++          +         K H I         + Q P+F + +  +   
Sbjct: 178 KFSSRIREAKLAGDHTEYYKASSEMAFYQKKHGIKLFKPLILPVTQAPIFISFFIALREM 237

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + I P+ ++ +M+  ++
Sbjct: 238 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 278

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         ++  MP++ +     FP  + +YW  SN+ S+ Q
Sbjct: 279 LGAETGVQSSDLQWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLAQ 329


>gi|229544288|ref|ZP_04433347.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1]
 gi|229325427|gb|EEN91103.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1]
          Length = 258

 Score = 97.8 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 36/242 (14%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           YF++    ++ +    L G++GIAI++ T+ ++L+  P     +     M++    +   
Sbjct: 37  YFVSPFSVVIKATAQLLHGDYGIAIIVLTLIIRLILMPFMLHTFKKQQIMQDKMKVLKPE 96

Query: 400 REKFK--------QSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISIS 450
            +K +        +     LQ+ M+ LY+ H +NPL  GC PI++Q+P+    Y  I  S
Sbjct: 97  MDKLQTKIKAAKTKEEQAKLQQEMMGLYQKHGVNPLNMGCLPIIIQMPILMGFYYAIRGS 156

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
            E+                 T+ F  F +    +P         I+  +  FIQ ++S  
Sbjct: 157 KEIA----------------THSFLWFNLGQTDIP-------MAILAGVIYFIQAQISLI 193

Query: 511 PADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
              + Q   + +M    P++ +F   S PA L +YW+ S +  I Q  +  K + +    
Sbjct: 194 GIPEEQKKQMKYMMLMSPIMILFVSFSAPAVLPLYWTVSGLFMIGQTLIQKKFYQSHPPK 253

Query: 567 ID 568
            +
Sbjct: 254 EE 255


>gi|116490952|ref|YP_810496.1| preprotein translocase subunit YidC [Oenococcus oeni PSU-1]
 gi|118586222|ref|ZP_01543686.1| integral membrane protein [Oenococcus oeni ATCC BAA-1163]
 gi|116091677|gb|ABJ56831.1| Preprotein translocase subunit YidC [Oenococcus oeni PSU-1]
 gi|118433338|gb|EAV40040.1| integral membrane protein [Oenococcus oeni ATCC BAA-1163]
          Length = 344

 Score = 97.8 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 89/254 (35%), Gaps = 15/254 (5%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
                 ++   M  + +  +      G AI+  T  ++++ FP+   Q            
Sbjct: 39  WLWIGQYMVAFMHWMANDVFKSTNGIGFAIIAITAVIRIVLFPIMFDQQRKATIQSEKMA 98

Query: 395 KIDELREKFKQSPPQVLQKA--------MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444
            +     K + +      +         M+ +Y+ +N++ + G     +L+Q+P+  ++Y
Sbjct: 99  MLQPQLSKVQAAMKTAQTQEEKVAVNTAMMSVYRENNVSMIGGVNFLSMLIQLPIISSLY 158

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
             I +S  +            ++       + F  +  Y P      I  I      +  
Sbjct: 159 TAIRLSTSVLKTDHINPATYSSSF--LLNGSHFFGIALYKPSITIAVIAGIFYLAQSWFM 216

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           +K +P    K    ++ + P++  F      A L +Y+       ++Q  +++K      
Sbjct: 217 LKTTPEAQRKQMQTMIWFTPIMMFFFAIFQSAALGLYFVVGGFFVLIQTLILLK---IRP 273

Query: 565 GLIDRLRSTFSKNY 578
            L +++R  F    
Sbjct: 274 KLQEKIRKEFKVKN 287


>gi|290890426|ref|ZP_06553501.1| hypothetical protein AWRIB429_0891 [Oenococcus oeni AWRIB429]
 gi|290479822|gb|EFD88471.1| hypothetical protein AWRIB429_0891 [Oenococcus oeni AWRIB429]
          Length = 344

 Score = 97.4 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 91/254 (35%), Gaps = 15/254 (5%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
                 ++   M  + +  +      G AI+  T  ++++ FP+   Q            
Sbjct: 39  WLWIGQYMVAFMHWMANDVFKSTNGIGFAIIAITAVIRIVLFPIMFDQQRKATIQSEKMA 98

Query: 395 KIDELREKFKQSPPQVLQKA--------MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444
            +     K + +      +         M+ +Y+ +N++ + G     +L+Q+P+  ++Y
Sbjct: 99  MLQPQLSKVQAAMKTAQTQEEKVAVNTAMMSVYRENNVSMIGGVNFLSMLIQLPIISSLY 158

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
             I +S  +            ++       + F  +  Y P      I  I      +  
Sbjct: 159 TAIRLSTSVLKTDHINPATYSSSF--LLNGSHFFGIALYKPSITIAVIAGIFYLAQSWFM 216

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           +K +P    K    ++ + P++  F      A L +Y+       ++Q  +++K+H    
Sbjct: 217 LKTTPEAQRKQMQTMIWFTPIMMFFFAIFQSAALGLYFVVGGFFVLIQTLILLKIH---P 273

Query: 565 GLIDRLRSTFSKNY 578
            L +++R  F    
Sbjct: 274 KLQEKIRKEFKVKN 287


>gi|289450229|ref|YP_003475561.1| YidC/Oxa1 family membrane protein insertase [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289184776|gb|ADC91201.1| membrane protein insertase, YidC/Oxa1 family [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
          Length = 321

 Score = 97.4 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 59/318 (18%), Positives = 121/318 (38%), Gaps = 85/318 (26%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           M+        +      +M   Y++  N+G+ I++ TV ++L+  P + KQ+ +T   + 
Sbjct: 1   MIYTASILSPLYVAFSWIMRNLYDIFNNYGLVIIIFTVAIRLIMIPFSVKQHKTTLKTQA 60

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-- 449
           + P++D+L+ +      Q LQ+A + LY+ HN++   GC P LL + + + +Y+++S   
Sbjct: 61  LAPQLDDLK-RVYGKDRQGLQEATMALYRKHNVSQFGGCLPSLLPLIIIWPVYRMVSSPL 119

Query: 450 ----------------------------------------------SLEMRHAPFWGWIK 463
                                                         + E  +A   GW+K
Sbjct: 120 QYISGAVTENITKLAQHLNQSGLITASELKNLAYSDIPVLTVLHTHATEFANAVEQGWLK 179

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMH---------VGIWPIIMSLSMFIQMKM------- 507
                DP  +    G      P  +          + I  ++  +S F+  KM       
Sbjct: 180 ASQLIDPYFLGVNLGDTATINPKLLFGDQMSRYLPILIIVLLAVVSTFLMSKMMEWTNPS 239

Query: 508 -------------SPP---PADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNV 547
                        +P      D  Q  ++      MP++ ++   S PA + IYW   N+
Sbjct: 240 YKKIKESKARAKNNPARSEVTDMTQQGMMKGMKFTMPLITLYMCFSMPAAMSIYWIVGNL 299

Query: 548 ISIVQQAVIMKMHGAEIG 565
           ++++QQ ++  ++  +  
Sbjct: 300 MAMLQQYILYALYTKKTK 317


>gi|57867621|ref|YP_189262.1| hypothetical protein SERP1697 [Staphylococcus epidermidis RP62A]
 gi|81673891|sp|Q5HMD1|OXAA2_STAEQ RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|57638279|gb|AAW55067.1| membrane protein, putative [Staphylococcus epidermidis RP62A]
 gi|319399577|gb|EFV87832.1| 60Kd inner membrane family protein [Staphylococcus epidermidis
           FRI909]
 gi|329726156|gb|EGG62628.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus
           epidermidis VCU144]
          Length = 290

 Score = 97.4 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 105/264 (39%), Gaps = 43/264 (16%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394
           +F    +PM  L+ +  N     NFG+AI++  +F++L+  P     Y ++  M+     
Sbjct: 32  FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 91

Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + ++++YK +++NP+    GC PIL+Q+P+   +Y
Sbjct: 92  AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 151

Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   L   +   P + W  +L   D                         +I  +  F
Sbjct: 152 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 189

Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556
           IQ     K  P    +   M++   P++ ++      + L +YWS S +  ++Q     I
Sbjct: 190 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANI 249

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580
                A+  +   +     ++  S
Sbjct: 250 YYSKLAKKEVQPFIEKYEREHNPS 273


>gi|312870531|ref|ZP_07730649.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus oris
           PB013-T2-3]
 gi|311093928|gb|EFQ52254.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus oris
           PB013-T2-3]
          Length = 314

 Score = 97.4 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 55/252 (21%), Positives = 104/252 (41%), Gaps = 35/252 (13%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + ++AKPM  LM +   +L  N+G AI++  V V+ +  P+   Q   +   +    K+ 
Sbjct: 36  YDYMAKPMQHLMEWLAAHLGNNYGWAIIVIVVVVRSILLPVMFSQMKKSTITQEKMAKVR 95

Query: 398 EL--------REKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
            L        +          + + M+ LY+ +NI+     GC P+L+Q+PVF A+Y  I
Sbjct: 96  PLIKELSEKQKAAKTPEEQAAVSQQMMALYRDNNISITGGIGCLPLLIQLPVFAALYAAI 155

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S ++ HA F+G    +A   P+ I  +   + +    ++ +   P             
Sbjct: 156 RYSPDLYHAEFFG----IALGKPSIILAVLSFIAYAAQSYLGLIGVP------------- 198

Query: 508 SPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
                 K Q  +  WM P +  F   +  AGL +Y+    + +I+Q  ++         +
Sbjct: 199 ---EEQKKQMKMAIWMSPFMTFFISLTSSAGLGLYFFIGGLFAILQTLMVN---AYRPRI 252

Query: 567 IDRLRSTFSKNY 578
             R+      + 
Sbjct: 253 RKRIEEESKNHP 264


>gi|303280353|ref|XP_003059469.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545]
 gi|226459305|gb|EEH56601.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545]
          Length = 240

 Score = 97.4 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 58/257 (22%), Positives = 99/257 (38%), Gaps = 42/257 (16%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           E++      +     +  ++ YF+      +  AI   T  +++  FPL   Q  S   M
Sbjct: 1   EVIAIAADSWITTAGLMYVIEYFHLAHGMEWYAAIAAATCVMRVCAFPLTIMQQKSAGKM 60

Query: 390 KNIQPKIDELRE------KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
              +P++  L+E      +  +         +  ++  H+++P     P+L Q PVF + 
Sbjct: 61  HLAKPEMTALQESINEARRAGEHERAARLGRVFAIWSKHDVHPAKMLAPLLFQAPVFISF 120

Query: 444 YKVISISLE----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           Y  IS   E    MR    + W +DL+ ADPT                      PII SL
Sbjct: 121 YFAISRMAEGLPSMRD-GGFAWFQDLSIADPTF-------------------ALPIISSL 160

Query: 500 SMFIQMKMSPPPAD--KGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
           +    ++ +P        Q  +  W    + V  V   +SFP+G+ +YW  SNV S  Q 
Sbjct: 161 TFLAAVEFAPQNPAVKSSQREMTKWGLRALGVAMVPLTASFPSGVFVYWITSNVFSFAQT 220

Query: 554 AVIM-----KMHGAEIG 565
            ++      +  G    
Sbjct: 221 VLLRVPFAKRAMGIPED 237


>gi|145221425|ref|YP_001132103.1| putative inner membrane protein translocase component YidC
           [Mycobacterium gilvum PYR-GCK]
 gi|145213911|gb|ABP43315.1| 60 kDa inner membrane insertion protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 376

 Score = 97.4 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 93/271 (34%), Gaps = 39/271 (14%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
                  + +                          + +++M     ++ + +    KQ 
Sbjct: 2   SFNWMSLDFIYYPVSAIMWVWYKAFAFLLGPTNFFAWALSVMFLVFTLRAILYKPFVKQI 61

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            +T  M+ +QP+I  L++K+     Q +   M +L + H  NP+ GC P+L Q+PVF  +
Sbjct: 62  RTTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQVPVFLGL 120

Query: 444 YKVISIS--------------LEMRH-APFWGWIKDLAAADPTNIFT------------L 476
           Y  +                  E R    ++    D+      N+F             L
Sbjct: 121 YHTLMSFNRTQTGIGRLGLSVEENRQLGNYFFSATDVQHFLDANLFGAPLGATMIQQHGL 180

Query: 477 FGILPFYLPGFMHVGI-WPIIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWMPV 525
                F     + VG+   I+  ++ +   +      SP  A   Q  ++        P+
Sbjct: 181 DAFTEFNRTSVIIVGVPIMILAGIATYFNSRASVARQSPEAAANPQTAMMNKLALYVFPL 240

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             V      P  +I+YW  +N+ +  QQ  +
Sbjct: 241 GVVVGGPFLPLAIIMYWLANNIWTFGQQHYV 271


>gi|223718097|ref|NP_005006.3| mitochondrial inner membrane protein OXA1L [Homo sapiens]
          Length = 495

 Score = 97.4 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ + + +L   +  AI   TVF + L FPL        A + N  P+I 
Sbjct: 178 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 237

Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++               + LY K H I         + Q P+F + +  +   
Sbjct: 238 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 297

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + I P+ ++ +M+  ++
Sbjct: 298 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 338

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         ++  MP++ +     FP  + +YW  SN+ S+VQ
Sbjct: 339 LGAETGVQSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 389


>gi|2546979|emb|CAA05127.1| OXA1L [Homo sapiens]
 gi|119586653|gb|EAW66249.1| oxidase (cytochrome c) assembly 1-like [Homo sapiens]
          Length = 495

 Score = 97.4 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ + + +L   +  AI   TVF + L FPL        A + N  P+I 
Sbjct: 178 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 237

Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++               + LY K H I         + Q P+F + +  +   
Sbjct: 238 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 297

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + I P+ ++ +M+  ++
Sbjct: 298 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 338

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         ++  MP++ +     FP  + +YW  SN+ S+VQ
Sbjct: 339 LGAETGVQSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 389


>gi|315446823|ref|YP_004079702.1| preprotein translocase subunit YidC [Mycobacterium sp. Spyr1]
 gi|315265126|gb|ADU01868.1| preprotein translocase subunit YidC [Mycobacterium sp. Spyr1]
          Length = 371

 Score = 97.4 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 93/265 (35%), Gaps = 39/265 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            + +                          + +++M     ++ + +    KQ  +T  M
Sbjct: 3   LDFIYYPVSAIMWVWYKAFAFLLGPTNFFAWALSVMFLVFTLRAILYKPFVKQIRTTRQM 62

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP+I  L++K+     Q +   M +L + H  NP+ GC P+L Q+PVF  +Y  +  
Sbjct: 63  QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQVPVFLGLYHTLMS 121

Query: 450 S--------------LEMRH-APFWGWIKDLAAADPTNIFT------------LFGILPF 482
                           E R    ++    D+      N+F             L     F
Sbjct: 122 FNRTQTGIGRLGLSVEENRQLGNYFFSATDVQHFLDANLFGAPLGATMIQQHGLDAFTEF 181

Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWMPVVFVFAL 531
                + VG+   I+  ++ +   +      SP  A   Q  ++        P+  V   
Sbjct: 182 NRTSVIIVGVPIMILAGIATYFNSRASVARQSPEAAANPQTAMMNKLALYVFPLGVVVGG 241

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556
              P  +I+YW  +N+ +  QQ  +
Sbjct: 242 PFLPLAIIMYWLANNIWTFGQQHYV 266


>gi|309379511|emb|CBX21877.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 250

 Score = 97.4 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 62/222 (27%), Gaps = 15/222 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+         A+++ I+  W+  +  P+      +    Q          +  A     
Sbjct: 1   MDF-KRLTAFFAIALAIMIGWEKMFPAPQTAPAPGQAAQQQRQTVATASAEAALAPATP- 58

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                     + +   ++   I+ K      L L  Y      + P V  L     +  Y
Sbjct: 59  ----------ITVTTDAVQAVIDEKSGDLRRLTLLKYKATGDEHKPFV--LFGDGKEYTY 106

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179
            A+ + +    N  L             +      ++L     N +  ++  +     YL
Sbjct: 107 VAQSELLDAQGNNVLKGIGFTAPQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 166

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
             +   + N        S   RI+R + Q     +  +    
Sbjct: 167 VNVRFDIANTGGKPANLSADYRIVRDRSQPEGQGYFTRSYLG 208


>gi|329735686|gb|EGG71969.1| putative stage III sporulation protein J [Staphylococcus
           epidermidis VCU028]
          Length = 293

 Score = 97.0 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 105/264 (39%), Gaps = 43/264 (16%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394
           +F    +PM  L+ +  N     NFG+AI++  +F++L+  P     Y ++  M+     
Sbjct: 32  FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 91

Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + ++++YK +++NP+    GC PIL+Q+P+   +Y
Sbjct: 92  AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 151

Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   L   +   P + W  +L   D                         +I  +  F
Sbjct: 152 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 189

Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556
           IQ     K  P    +   M++   P++ ++      + L +YWS S +  ++Q     I
Sbjct: 190 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANI 249

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580
                A+  +   +     ++  S
Sbjct: 250 YYSKLAKKEVQPFIEKYEREHNPS 273


>gi|163790185|ref|ZP_02184618.1| integral membrane protein [Carnobacterium sp. AT7]
 gi|159874460|gb|EDP68531.1| integral membrane protein [Carnobacterium sp. AT7]
          Length = 307

 Score = 97.0 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 96/255 (37%), Gaps = 39/255 (15%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ------ 393
           + +     +++       G++G++I+  T+ V+L+  PL   Q   +   +         
Sbjct: 39  FLVVPTQQVIIQLADFFGGSYGLSIIAITLAVRLIIMPLNLSQSKKSIIQQEKMALIKPE 98

Query: 394 --PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISI 449
                 + +           Q+ ++ LYK +N++ L   GC P+L+Q+PVF A+++ I++
Sbjct: 99  MDEVQKKQKAAVTAEEKAAAQQELMSLYKDNNMSMLGGIGCLPLLIQMPVFTAMFQAINL 158

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S E+ ++ F G                F +    +          I      F+Q  +S 
Sbjct: 159 STEISNSTFLG----------------FSLGNQNIA-------LAIAAGAVYFVQSYVSM 195

Query: 510 PPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
                 Q      ++   P++ +    + PAGL +YW    + ++ Q  +       +  
Sbjct: 196 IGLPDEQKKQMRTMMYVSPIMILMVSFTSPAGLGLYWFVGGIFAVFQTIITN--FIFKPR 253

Query: 566 LIDRLRSTFSKNYNS 580
           +  +L          
Sbjct: 254 IKAQLEEEARNRPAK 268


>gi|85662644|gb|AAI12332.1| Oxidase (cytochrome c) assembly 1-like [Homo sapiens]
          Length = 496

 Score = 97.0 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ + + +L   +  AI   TVF + L FPL        A + N  P+I 
Sbjct: 178 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 237

Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++               + LY K H I         + Q P+F + +  +   
Sbjct: 238 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 297

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + I P+ ++ +M+  ++
Sbjct: 298 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 338

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         ++  MP++ +     FP  + +YW  SN+ S+VQ
Sbjct: 339 LGAETGVQSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 389


>gi|148985978|ref|ZP_01819031.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae
           SP3-BS71]
 gi|147921951|gb|EDK73076.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae
           SP3-BS71]
          Length = 274

 Score = 97.0 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  +   F+      F  +  F +   + G+ I+L TV ++ +  P+ + Q V++  M+
Sbjct: 29  DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 88

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 89  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L + D T                    + PI+ ++  F+   +
Sbjct: 149 SR-VDFLKTGQFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 187

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240


>gi|116872811|ref|YP_849592.1| OxaA-like protein precursor [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741689|emb|CAK20813.1| oxaA/SpoIIIJ family membrane protein [Listeria welshimeri serovar
           6b str. SLCC5334]
          Length = 275

 Score = 97.0 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 39/253 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393
            Y I      +M     +  N+G+AI++TT+ ++ L  PL  +   +   M++       
Sbjct: 36  TYLIQPFTSFIMFVASFVGDNYGVAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95

Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449
                   L+    +     +QK M+ +Y  +NINPL  GC P+L+Q+P+  A Y  I  
Sbjct: 96  EIDEIQARLKRATSKEEQATIQKEMMTVYSKYNINPLQMGCLPLLIQMPILMAFYYAIRG 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S E+  +  + W  +L  +D                      +  II  L    Q  +S 
Sbjct: 156 SSEIA-SHTFLWF-NLGESDM---------------------VLAIIAGLVYLAQYFVSM 192

Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-- 563
                 Q   +  +    P++ +F   + P+ L +YW+   +    Q  +  K++  +  
Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHP 252

Query: 564 -IGLIDRLRSTFS 575
            I ++++    F 
Sbjct: 253 EIKVMEQEEKEFE 265


>gi|307710908|ref|ZP_07647334.1| membrane protein oxaA 1 [Streptococcus mitis SK321]
 gi|307617264|gb|EFN96438.1| membrane protein oxaA 1 [Streptococcus mitis SK321]
          Length = 274

 Score = 97.0 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 100/233 (42%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  D   F+      F  +  F +   + G+ I+L TV ++ L  P+ + Q V++  M+
Sbjct: 29  DITADSADFWSKFVYFFAEIIRFLSFDISIGVGIILFTVLIRTLLLPVFQVQMVASRKMQ 88

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 89  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI                     L G     + PI+ ++  F+   +
Sbjct: 149 SR-VDFLKTGHFLWIN--------------------LGGVDTTLVLPILAAVFTFLSTWL 187

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240


>gi|293364737|ref|ZP_06611454.1| SpoIIIJ family protein [Streptococcus oralis ATCC 35037]
 gi|291316187|gb|EFE56623.1| SpoIIIJ family protein [Streptococcus oralis ATCC 35037]
          Length = 312

 Score = 97.0 bits (239), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 77/212 (36%), Gaps = 30/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 86  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 145

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+Q+P F AIY     +  +  + F G   DL +     +    GIL +        G+
Sbjct: 146 ILIQMPFFSAIYFAAQYTDGVASSTFLG--IDLGSP-SLLLVAFAGILYYLQSLLSLHGV 202

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
                               D+ Q      ++   P++ V      PA + +YW     +
Sbjct: 203 -------------------EDEMQRDQLKRMIYVSPLMIVVFSFFAPASVTLYWVVGGFM 243

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            I+QQ ++   +     L  ++R  F+KN   
Sbjct: 244 MILQQFIVN--YVVRPKLRKKVREEFAKNPPK 273


>gi|307702984|ref|ZP_07639931.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037]
 gi|307623377|gb|EFO02367.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037]
          Length = 309

 Score = 96.6 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 77/212 (36%), Gaps = 30/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+Q+P F AIY     +  +  + F G   DL +     +    GIL +        G+
Sbjct: 143 ILIQMPFFSAIYFAAQYTDGVASSTFLG--IDLGSP-SLLLVAFAGILYYLQSLLSLHGV 199

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
                               D+ Q      ++   P++ V      PA + +YW     +
Sbjct: 200 -------------------EDEMQRDQLKRMIYVSPLMIVVFSFFAPASVTLYWVVGGFM 240

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            I+QQ ++   +     L  ++R  F+KN   
Sbjct: 241 MILQQFIVN--YVVRPKLRKKVREEFAKNPPK 270


>gi|307110546|gb|EFN58782.1| hypothetical protein CHLNCDRAFT_140542 [Chlorella variabilis]
          Length = 426

 Score = 96.6 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 95/230 (41%), Gaps = 23/230 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANM-------K 390
            +   + +  L++  +  +G     +IM+ T  ++L   P+   Q  +T  M       +
Sbjct: 156 SWLPTRLIQGLLTGLHGALGLEWWQSIMVATCAMRLATLPIMIMQIKNTYRMSLARPEME 215

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            +   + E + K         Q+ ++ ++K +N NP      +L+Q P+F   +  +   
Sbjct: 216 VLMNHVKEEQAKGNMEAALEHQQHVMAVWKKYNCNPFKSMAGMLVQAPIFIGFFSALRGF 275

Query: 451 LEMR----HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
              +          W  DL  ADPT +      L F         +  I +  +  +Q +
Sbjct: 276 AAHKVPSLTEGGALWFTDLTVADPTYMLPALAGLSF---------LLTIELGAADGMQGQ 326

Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             PP   K    ++  + +V   A ++ PA + +YWS SNV S++Q +++
Sbjct: 327 --PPEMQKKLKNVMRVVALVIPLASTALPASVFMYWSASNVFSLLQTSLL 374


>gi|298253034|ref|ZP_06976826.1| preprotein translocase subunit YidC [Gardnerella vaginalis 5-1]
 gi|297532429|gb|EFH71315.1| preprotein translocase subunit YidC [Gardnerella vaginalis 5-1]
          Length = 337

 Score = 96.6 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 107/256 (41%), Gaps = 21/256 (8%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            + +            +  +           + +     +  ++  +I+   + V    F
Sbjct: 8   ILDNGFLGWFYKILTPVEWFMTQIMSLFHKLLTLLGMNEVGFSWVFSIVFLVLVVHACIF 67

Query: 377 PLAKKQYVSTANMKNIQPKIDELRE----KFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432
           P   K       M+ I PKI ++++    K   +  + +Q+ M++LY+ +  NP   C P
Sbjct: 68  PAFIKSIKGMRKMQAIAPKIKKIQQKYKGKNDPASKEAMQREMMKLYQDNKANPAGSCLP 127

Query: 433 ILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGI------LPFYLP 485
           +++Q P F +I+  +S+     R         D+A A       +FG+      +     
Sbjct: 128 MMIQGPAFMSIWYTLSVIPFIARGKHAALGAFDIATAQQFVKTRVFGVGVADTFMTTAGA 187

Query: 486 GFMHVGIWPIIMSLSMFIQM----KMSPPPADKG------QAMILNWMPVVFVFALSSFP 535
           G + + I+ ++M  +M+       + + PP  K       Q +++   P+++VF+  + P
Sbjct: 188 GKIVIVIFVVLMCAAMWYMQFNNIRKNLPPESKQGSQYTVQKLMMWGFPLIYVFSAFAMP 247

Query: 536 AGLIIYWSWSNVISIV 551
             +++YW  +NVI+++
Sbjct: 248 FAMLVYWLVNNVINML 263


>gi|317130857|ref|YP_004097139.1| membrane protein insertase, YidC/Oxa1 family [Bacillus
           cellulosilyticus DSM 2522]
 gi|315475805|gb|ADU32408.1| membrane protein insertase, YidC/Oxa1 family [Bacillus
           cellulosilyticus DSM 2522]
          Length = 274

 Score = 96.6 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 101/253 (39%), Gaps = 42/253 (16%)

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
             P  E    +   Y +    +++  +     GN+G +I+L T+ +++   PL  KQY +
Sbjct: 33  NEPIDENTAGFFNHYVVYPFSYLIKFFAAMFNGNYGASIILMTILLRMALMPLMLKQYKN 92

Query: 386 TANMKN--------IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILL 435
              MK         +Q   ++ ++K  Q   +  Q+ ++ +Y+ HN NP+   GC P+++
Sbjct: 93  QIVMKEKMSVIQPEMQKINEQYKDKKDQESQRKKQQELMAVYQKHNFNPIASMGCLPMII 152

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           Q+P+    Y  I  + E+     + W  +L   D                      I P 
Sbjct: 153 QLPILMGFYWAIMRTPEIASHS-FLWF-NLGETD---------------------LILPF 189

Query: 496 IMSLSMFIQMKMSPPP--ADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVIS 549
           + +   F+Q K+S        GQ  ++  M    PV+         A L +YW+   +  
Sbjct: 190 LAAFVYFVQFKVSQIGVIPQPGQENMMKMMGFITPVMMGVFSFGMAAALPLYWTIGGLFL 249

Query: 550 IVQQAV---IMKM 559
           I Q  +   I K 
Sbjct: 250 IFQTLLSKAIYKK 262


>gi|156401497|ref|XP_001639327.1| predicted protein [Nematostella vectensis]
 gi|156226455|gb|EDO47264.1| predicted protein [Nematostella vectensis]
          Length = 308

 Score = 96.6 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 94/238 (39%), Gaps = 37/238 (15%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ-------SPPQVLQ 412
           +  +I+  T+  + L FPL  K   + A + N++P+++E++ + +               
Sbjct: 41  WVWSIVAATIAFRTLMFPLIVKSQANAARLNNVKPELEEVQAQLRDLMNSNNAIGKAAAS 100

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468
             + QLYK ++ +P+      L+Q+P+F      + ++ ++ +E        W  DL A 
Sbjct: 101 ARLQQLYKDNDCHPIKSIIAPLVQVPLFISFFVGLRRMANLPVESFKEGGLFWFTDLTAY 160

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMI---LNWM 523
           DP                     + PI+ SL+M   +++       +     +      M
Sbjct: 161 DPYF-------------------VLPIVCSLTMLASIELGGEAGVSNPQMQHMKTFFRVM 201

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            V  +   + FPA +  YW  SN+ S+ Q +++     A             KN  +Q
Sbjct: 202 CVAMIPLTAQFPAAIFTYWVTSNLFSLGQVSLL--KVKAVREYFGIPEMKVHKNLPAQ 257


>gi|223933965|ref|ZP_03625923.1| 60 kDa inner membrane insertion protein [Streptococcus suis
           89/1591]
 gi|302024559|ref|ZP_07249770.1| membrane protein OxaA 1 precursor [Streptococcus suis 05HAS68]
 gi|330833639|ref|YP_004402464.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3]
 gi|223897357|gb|EEF63760.1| 60 kDa inner membrane insertion protein [Streptococcus suis
           89/1591]
 gi|329307862|gb|AEB82278.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3]
          Length = 270

 Score = 96.6 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 103/253 (40%), Gaps = 28/253 (11%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
                 +  +      ++ +        GI I+L T+ ++ L  PL + Q  S+  M+ +
Sbjct: 28  SQSTDAWDRLIYWFASIIQFLSINGQ-IGIGIILFTILIRTLLLPLFQIQMNSSRKMQEL 86

Query: 393 QPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           QP++ +L+ ++  +     Q L +A   LYK + ++  A   P+ +Q+P+  A+++ ++ 
Sbjct: 87  QPQLKKLQAEYPGTDMESRQQLYEATQALYKENGVSMRASMIPLFIQMPILLALFQALTR 146

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
            +E      + W+ +L   DP                     I PI+ ++  F+   ++ 
Sbjct: 147 -VEALKVGHFLWL-NLGEPDPFF-------------------ILPIMAAVFTFLSSWLTN 185

Query: 510 PPA--DKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
             A        I+ + MPV+  F   +  +G+ +YW+ SN   + Q  V           
Sbjct: 186 KSAIEKNMAMTIMTYVMPVMIFFFAVAAASGVALYWTVSNAYQVAQTLVFNNPFKIIAER 245

Query: 567 IDRLRSTFSKNYN 579
             ++ +   +   
Sbjct: 246 QAKIDAEKERQAK 258


>gi|283782566|ref|YP_003373320.1| membrane protein insertase, YidC/Oxa1 family [Gardnerella vaginalis
           409-05]
 gi|283441507|gb|ADB13973.1| membrane protein insertase, YidC/Oxa1 family [Gardnerella vaginalis
           409-05]
          Length = 337

 Score = 96.6 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 106/256 (41%), Gaps = 21/256 (8%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            + +            +              + +     +  ++  +I+   + V    F
Sbjct: 8   ILDNGFLGWFYKILTPVEWLMTQIMSLFHKLLTLLGMNEVGFSWVFSIVFLVLVVHACIF 67

Query: 377 PLAKKQYVSTANMKNIQPKIDELRE----KFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432
           P   K       M+ I PKI ++++    K   +  + +Q+ M++LY+ +  NP   C P
Sbjct: 68  PAFIKSIKGMRKMQAIAPKIKKIQQKYKGKNDPASKEAMQREMMKLYQDNKANPAGSCLP 127

Query: 433 ILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGI------LPFYLP 485
           +++Q P F +I+  +S+     R         D+A A       +FG+      +     
Sbjct: 128 MMIQGPAFMSIWYTLSVIPFIARGKHAALGAFDIATAQQFVKTRVFGVGVADTFMTTAGA 187

Query: 486 GFMHVGIWPIIMSLSMFIQM----KMSPPPADKG------QAMILNWMPVVFVFALSSFP 535
           G + + I+ ++M  +M+       + + PP  K       Q +++   P+++VF+  + P
Sbjct: 188 GKIVIVIFVVLMCAAMWYMQFNNIRKNLPPESKQGSQYTVQKLMMWGFPLIYVFSAFAMP 247

Query: 536 AGLIIYWSWSNVISIV 551
             +++YW  +NVI+++
Sbjct: 248 FAMLVYWLVNNVINML 263


>gi|282876503|ref|ZP_06285369.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus
           epidermidis SK135]
 gi|281294755|gb|EFA87283.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus
           epidermidis SK135]
          Length = 290

 Score = 96.6 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 105/264 (39%), Gaps = 43/264 (16%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394
           +F    +PM  L+ +  N     NFG+AI++  +F++L+  P     Y ++  M+     
Sbjct: 32  FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 91

Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + ++++YK +++NP+    GC PIL+Q+P+   +Y
Sbjct: 92  AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 151

Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   L   +   P + W  +L   D                         +I  +  F
Sbjct: 152 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 189

Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556
           IQ     K  P    +   M++   P++ ++      + L +YWS S +  ++Q     +
Sbjct: 190 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANV 249

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580
                A+  +   +     ++  S
Sbjct: 250 YYSKLAKKEVQPFIEKYEREHNPS 273


>gi|37589026|gb|AAH01669.2| OXA1L protein [Homo sapiens]
          Length = 437

 Score = 96.6 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ + + +L   +  AI   TVF + L FPL        A + N  P+I 
Sbjct: 120 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 179

Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++               + LY K H I         + Q P+F + +  +   
Sbjct: 180 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 239

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + I P+ ++ +M+  ++
Sbjct: 240 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 280

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         ++  MP++ +     FP  + +YW  SN+ S+VQ
Sbjct: 281 LGAETGVQSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 331


>gi|27468607|ref|NP_765244.1| lipoprotein precursor [Staphylococcus epidermidis ATCC 12228]
 gi|38502988|sp|Q8CMK8|OXAA2_STAES RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|27316154|gb|AAO05288.1|AE016749_234 lipoprotein precursor [Staphylococcus epidermidis ATCC 12228]
          Length = 290

 Score = 96.6 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 104/263 (39%), Gaps = 43/263 (16%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394
           +F    +PM  L+ +  N     NFG+AI++  +F++L+  P     Y ++  M+     
Sbjct: 32  FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 91

Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + ++++YK +++NP+    GC PIL+Q+P+   +Y
Sbjct: 92  AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 151

Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   L   +   P + W  +L   D                         +I  +  F
Sbjct: 152 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 189

Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556
           IQ     K  P    +   M++   P++ ++      + L +YWS S +  ++Q     I
Sbjct: 190 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANI 249

Query: 557 MKMHGAEIGLIDRLRSTFSKNYN 579
                A+  +   +     ++  
Sbjct: 250 YYSKLAKKEVQPFIEKYEREHNP 272


>gi|114652024|ref|XP_001156985.1| PREDICTED: oxidase (cytochrome c) assembly 1-like isoform 4 [Pan
           troglodytes]
 gi|114652026|ref|XP_509840.2| PREDICTED: mitochondrial inner membrane protein OXA1L isoform 5
           [Pan troglodytes]
          Length = 435

 Score = 96.2 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ + + +L   +  AI   TVF + L FPL        A + N  P+I 
Sbjct: 118 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 177

Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++               + LY K H I         + Q P+F + +  +   
Sbjct: 178 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 237

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + I P+ ++ +M+  ++
Sbjct: 238 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 278

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         ++  MP++ +     FP  + +YW  SN+ S+VQ
Sbjct: 279 LGAETGVQSSDLQWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 329


>gi|38372882|sp|Q15070|OXA1L_HUMAN RecName: Full=Mitochondrial inner membrane protein OXA1L; AltName:
           Full=Hsa; AltName: Full=OXA1Hs; AltName: Full=Oxidase
           assembly 1-like protein; Short=OXA1-like protein; Flags:
           Precursor
 gi|619491|emb|CAA56712.1| OXA1Hs [Homo sapiens]
 gi|194389996|dbj|BAG60514.1| unnamed protein product [Homo sapiens]
          Length = 435

 Score = 96.2 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ + + +L   +  AI   TVF + L FPL        A + N  P+I 
Sbjct: 118 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 177

Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++               + LY K H I         + Q P+F + +  +   
Sbjct: 178 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 237

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + I P+ ++ +M+  ++
Sbjct: 238 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 278

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         ++  MP++ +     FP  + +YW  SN+ S+VQ
Sbjct: 279 LGAETGVQSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 329


>gi|256847493|ref|ZP_05552939.1| inner membrane insertion protein [Lactobacillus coleohominis
           101-4-CHN]
 gi|256716157|gb|EEU31132.1| inner membrane insertion protein [Lactobacillus coleohominis
           101-4-CHN]
          Length = 315

 Score = 96.2 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 100/254 (39%), Gaps = 33/254 (12%)

Query: 339 FYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + ++AKPM  LM +  +L+  N+G AI++  + V+L+  P+   Q   +  M+     I 
Sbjct: 40  YEYLAKPMQHLMEWLASLMGNNYGWAIIVIVIVVRLILLPVMMSQMKKSTLMQEKMSMIQ 99

Query: 398 ELREKFKQSPPQVLQKA--------MIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
               + ++                 M+ LY+ +NI+     GC P+L+Q+PVF A+Y  I
Sbjct: 100 PQLREIQRQQKAAKTPEEQAAATQAMMALYRDNNISMTGGIGCLPLLIQLPVFAALYAAI 159

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S ++ HA                    F  +P   P  M   +  +      ++ M  
Sbjct: 160 RYSPDLYHA-------------------TFLGIPLGKPSIMLAILSFVAYLFQGWLSMIG 200

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
            P        M++   PV+  F   +  AGL +Y+    + +I+Q  +I         L 
Sbjct: 201 MPKNQQAQMRMMMLMSPVMIFFISMTSSAGLGLYFFIGGLFAILQTWLIN---AYRPHLK 257

Query: 568 DRLRSTFSKNYNSQ 581
            ++          +
Sbjct: 258 KQIAQEVKNRPAPK 271


>gi|329734155|gb|EGG70473.1| putative stage III sporulation protein J [Staphylococcus
           epidermidis VCU045]
          Length = 282

 Score = 96.2 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 104/263 (39%), Gaps = 43/263 (16%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394
           +F    +PM  L+ +  N     NFG+AI++  +F++L+  P     Y ++  M+     
Sbjct: 32  FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 91

Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + ++++YK +++NP+    GC PIL+Q+P+   +Y
Sbjct: 92  AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 151

Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   L   +   P + W  +L   D                         +I  +  F
Sbjct: 152 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 189

Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556
           IQ     K  P    +   M++   P++ ++      + L +YWS S +  ++Q     I
Sbjct: 190 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANI 249

Query: 557 MKMHGAEIGLIDRLRSTFSKNYN 579
                A+  +   +     ++  
Sbjct: 250 YYSKLAKKEVQPFIEKYEREHNP 272


>gi|332365176|gb|EGJ42939.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis
           SK1059]
          Length = 271

 Score = 96.2 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 29/232 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409
            F +  G+ GI I+L T+ ++ +  P+ + Q  S+  ++ +QP I  L+EK+     +  
Sbjct: 46  RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESR 105

Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L +   +LYK   +NP A   P+ +Q+PV  A+++ ++  ++      + W+ +L A 
Sbjct: 106 TALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525
           DPT                    I P++ +L  F+   +S       + G  +++  +PV
Sbjct: 164 DPTF-------------------ILPLLAALFTFLSTWLSNKALPERNGGMTVMMYLLPV 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
              F      +G+ +YW+ SN   +VQ  ++   +  +I      +    + 
Sbjct: 205 AIFFFAFYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254


>gi|114652028|ref|XP_001156923.1| PREDICTED: oxidase (cytochrome c) assembly 1-like isoform 3 [Pan
           troglodytes]
          Length = 408

 Score = 96.2 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ + + +L   +  AI   TVF + L FPL        A + N  P+I 
Sbjct: 118 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 177

Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++               + LY K H I         + Q P+F + +  +   
Sbjct: 178 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 237

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + I P+ ++ +M+  ++
Sbjct: 238 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 278

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         ++  MP++ +     FP  + +YW  SN+ S+VQ
Sbjct: 279 LGAETGVQSSDLQWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 329


>gi|224053781|ref|XP_002297976.1| inner membrane protein [Populus trichocarpa]
 gi|222845234|gb|EEE82781.1| inner membrane protein [Populus trichocarpa]
          Length = 459

 Score = 95.8 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 89/236 (37%), Gaps = 34/236 (14%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           E+ I     YF    +  ++   ++    N+  +I++TT+ ++    PL   Q  +T  +
Sbjct: 130 EVAIAAADSYFPVAALQHVIDAVHSFTGFNWWASIIVTTLLIRGATVPLLINQLKATTKL 189

Query: 390 KNIQPKIDELRE----KFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIY 444
             ++P ++E+R+    K          +  ++ L+K + ++PL     + +Q P+F + +
Sbjct: 190 TLMRPHLEEIRQQMSDKAMDPMALAEGQKQMKKLFKEYGVSPLTPLKGLFIQGPIFVSFF 249

Query: 445 KVISISLE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501
             IS   E      +    W  DL   D                      I PI+  L+ 
Sbjct: 250 LAISNMTEKVPSFKSGGAYWFLDLTTPDSLY-------------------ILPILTGLTF 290

Query: 502 FIQMKMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           +I ++ +        P       +     V  V     FP  +  YW  SN+ S+ 
Sbjct: 291 WITVECNMQEGLEGNPIAATMKKVSRVFAVASVPLTMGFPNAIFCYWVTSNLFSLF 346


>gi|261884151|ref|ZP_06008190.1| putative inner membrane protein translocase component YidC
           [Campylobacter fetus subsp. venerealis str. Azul-94]
          Length = 146

 Score = 95.8 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 62/142 (43%), Positives = 100/142 (70%), Gaps = 1/142 (0%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
              +I++GWF FIAKPMF+L+S+ +N +GN+G AI+  T+ ++++ FPL  K  VS   +
Sbjct: 1   MVDVIEYGWFTFIAKPMFLLLSWLHNYIGNWGFAIVALTIVIRIVLFPLTYKGMVSMNKL 60

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           K++ PK+ E++ K+K  P + L   +++LYK +  NP+ GC PIL+QIP+FFAIY+V+  
Sbjct: 61  KDLAPKMKEIQAKYKGDPSK-LNAHVMELYKKNGANPMGGCLPILIQIPIFFAIYRVLLN 119

Query: 450 SLEMRHAPFWGWIKDLAAADPT 471
           ++E++ AP+  WIKDLA  +  
Sbjct: 120 AIELKGAPWIFWIKDLAIMEQA 141


>gi|315038841|ref|YP_004032409.1| hypothetical protein LA2_08525 [Lactobacillus amylovorus GRL 1112]
 gi|312276974|gb|ADQ59614.1| hypothetical protein LA2_08525 [Lactobacillus amylovorus GRL 1112]
          Length = 322

 Score = 95.8 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 98/268 (36%), Gaps = 47/268 (17%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYVS 385
               G + ++ + +   +        +        G  I++ T  V+L+  PL   Q   
Sbjct: 33  APHSGIYGWVYQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNK 92

Query: 386 TANMKNIQPKIDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCWPIL 434
           +   +    ++          ++ K      Q+       +LY  + ++     GC P++
Sbjct: 93  SVRQQEKMARLQPQMKLIQTAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGMGCLPLI 152

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ + IY+ +  S ++ H+ F+G    L+                         +  
Sbjct: 153 IQLPIMWGIYQAVFYSPQLAHSTFFG--ISLSQK---------------------SVVLA 189

Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISI 550
           I+ ++   IQ  +S     + Q   +  M    P++ +F   SF   L +YW+  N+++I
Sbjct: 190 IVATVFTVIQGYISLIGIPEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVTI 249

Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           +QQ ++         +   +     +  
Sbjct: 250 IQQLIVT--FVLTPKVKQHVAEELKEKP 275


>gi|332523130|ref|ZP_08399382.1| putative stage III sporulation protein J [Streptococcus porcinus
           str. Jelinkova 176]
 gi|332314394|gb|EGJ27379.1| putative stage III sporulation protein J [Streptococcus porcinus
           str. Jelinkova 176]
          Length = 270

 Score = 95.8 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 102/233 (43%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++       +      F     + +   + G+ I+L T+ ++LL  PL   Q  S+  M+
Sbjct: 24  DISAHSTSGWDQLVYFFAKSVQWLSFNRSIGVGIILFTILIRLLLMPLFNIQIKSSQKMQ 83

Query: 391 NIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           ++QP++ +++ K+     +           LYK + +NP A  +P+++Q+P+  A+++ +
Sbjct: 84  DLQPELKKIQAKYPGKDSESRMALADETQALYKNNGVNPYASLFPLVIQMPIMIALFQAL 143

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +    ++    + W  +LA  D                   H+ I PI+ +L  F+   +
Sbjct: 144 TRVPFLK-TGTFLW-AELAQHD-------------------HLYILPILAALFTFLSSWL 182

Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +   A   +    ++   MPV+  F      +G+++YW  SN   + Q  ++ 
Sbjct: 183 TNLAAKEKNMVMTVMTYMMPVMIFFMGFKLASGVVLYWVISNAFQVFQLLLLN 235


>gi|327468457|gb|EGF13942.1| stage III sporulation protein J [Streptococcus sanguinis SK330]
          Length = 271

 Score = 95.8 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 29/232 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409
            F +  G+ GI I+L T+ ++ +  P+ + Q  S+  ++ +QP I  L+EK+     +  
Sbjct: 46  RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESR 105

Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L +   +LYK   +NP A   P+ +Q+PV  A+++ ++  ++      + W+ +L A 
Sbjct: 106 TALAEETQKLYKEMGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525
           DPT                    I P++ +L  F+   +S       + G  +++  +PV
Sbjct: 164 DPTF-------------------ILPLLAALFTFLSTWLSNKALPERNGGMTVMMYLLPV 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
              F      +G+ +YW+ SN   +VQ  ++   +  +I      +    + 
Sbjct: 205 AIFFFAFYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254


>gi|332018694|gb|EGI59266.1| Mitochondrial inner membrane protein OXA1L [Acromyrmex echinatior]
          Length = 442

 Score = 95.8 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 106/259 (40%), Gaps = 40/259 (15%)

Query: 340 YFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     +  L+ + + NL   + +AI++TT+  + L FPL  K   +   + N  PKI +
Sbjct: 145 WTPTGIVHNLLEFMHINLDMPWWLAIVITTICARSLLFPLVIKTQKNVIRLTNHMPKIQD 204

Query: 399 LREKFKQSPPQVLQK-------AMIQLYKTHNINPLAGCWPILLQIPVF----FAIYKVI 447
              +  ++               M++  KT+ I+        L+Q PVF    FA+ K+ 
Sbjct: 205 FNIRLTEARNCGDHMQSAQIATEMMKYMKTNKISFTQNVMMPLVQAPVFISFFFALRKMA 264

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           ++ +E      + W+KDL   DP                     I PII S++MFI +++
Sbjct: 265 NLPVESLKDGGFLWLKDLTVYDPYY-------------------IMPIITSVTMFITIEL 305

Query: 508 SPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV-----IMK 558
                +     ++ +    +P V +  +  FP  ++ YW  +N +S++Q        I K
Sbjct: 306 GTDGTNIYAMGVMRYVLRALPFVALPFMLHFPGTILTYWVATNTVSLIQTGFLKIPRIKK 365

Query: 559 MHGAEIGLIDRLRSTFSKN 577
             G    +    +++    
Sbjct: 366 ALGMPSMIKRNPKASTKSK 384


>gi|301300964|ref|ZP_07207129.1| sodium pump decarboxylase, gamma subunit [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851431|gb|EFK79150.1| sodium pump decarboxylase, gamma subunit [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 260

 Score = 95.8 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 90/241 (37%), Gaps = 32/241 (13%)

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS---- 406
                L G++G +I++ T  V+L+  P+   Q       +     I     K ++     
Sbjct: 3   WLSGVLGGSYGWSIIVITFIVRLIMMPIMINQSKKATIQQEKIAMIRPQLAKIQEQQKNA 62

Query: 407 ----PPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
                     +AM++LY+ +NI+ +   GC P+L+Q+P+F A+Y  I  S E+       
Sbjct: 63  KTPEERNAASQAMMKLYQENNISMVGGIGCLPLLIQMPIFAALYAAIQYSPEL------- 115

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
                         T F  +      F  V +  +I +L  ++     P    K    ++
Sbjct: 116 ------------SKTTFMGINLGHRSFTFVVLTFVIYALQGWLSTLGLPEEQKKQMQSMI 163

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
              PV+        PAGL +Y+    + + +Q  +I  M      +   ++         
Sbjct: 164 IVSPVMLTGMTYISPAGLGLYFFIGGIFACIQTLIINFM---RPRIRKDIKKELKNKPIK 220

Query: 581 Q 581
           +
Sbjct: 221 E 221


>gi|315303048|ref|ZP_07873756.1| membrane protein OxaA 2 [Listeria ivanovii FSL F6-596]
 gi|313628583|gb|EFR97008.1| membrane protein OxaA 2 [Listeria ivanovii FSL F6-596]
          Length = 275

 Score = 95.8 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 36/238 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393
            Y I      +M     +  N+G+AI++TT+ ++ L  PL  +   +   M++       
Sbjct: 36  TYLIQPFTSFIMFVASFVGDNYGVAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95

Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449
                   L+    +     +QK M+ +Y  +NINP+  GC P+L+Q+P+  A Y  I  
Sbjct: 96  EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S E+  +  + W  +L + D                      +  II  L    Q  +S 
Sbjct: 156 SSEIA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192

Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                 Q   +  +    P++ +F   + P+ L +YW+   +    Q  +  K++  +
Sbjct: 193 IGYSPEQKKQMRIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNK 250


>gi|149003816|ref|ZP_01828644.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69]
 gi|147758150|gb|EDK65153.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69]
          Length = 274

 Score = 95.8 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 102/233 (43%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++  +   F+      F  +  F +   + G+ I+L TV +  +  P+ + Q V++  M+
Sbjct: 29  DITAESADFWSKLVYFFAKIIRFLSFDISIGVGIILFTVLICTVLLPVFQVQMVASRKMQ 88

Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             QP+I  LRE++     +    L++ M +++K   +      WPIL+Q+PV  A+++ +
Sbjct: 89  EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           S  ++      + WI +L + D T                    + PI+ ++  F+   +
Sbjct: 149 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 187

Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           S       +     ++  +PV+        P G+ +YW+ SN   ++Q   + 
Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240


>gi|327472485|gb|EGF17916.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis
           SK408]
          Length = 271

 Score = 95.4 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 103/232 (44%), Gaps = 29/232 (12%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409
            F +  G+ GI I+L T+ ++ +  P+ + Q  S+  ++  QP I  L+EK+     +  
Sbjct: 46  RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEAQPHIKRLQEKYPGKDMESR 105

Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
             L +   +LYK   +NP A   P+ +Q+PV  A+++ ++  ++      + W+ +L A 
Sbjct: 106 TALAEETQKLYKEMGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525
           DPT                    I P++ +L  F+   +S       + G  +++  +PV
Sbjct: 164 DPTF-------------------ILPLLAALFTFLSTWLSNKALPERNGGMTVMMYLLPV 204

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
              F      +G+ +YW+ SN   +VQ  ++   +  +I      +    + 
Sbjct: 205 AIFFFAFYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254


>gi|112830|sp|P22833|OXAA_PROMI RecName: Full=Inner membrane protein oxaA
 gi|150874|gb|AAA83954.1| ORF1; putative [Proteus mirabilis]
          Length = 237

 Score = 95.4 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 70/242 (28%), Gaps = 18/242 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  + IAL  +    WQ +      +      +  Q    P+    +        
Sbjct: 1   MDSQRNL-LFIALLFVSFLIWQQWEGDKVSQNTTTTTQVSQQADMPSSDSLAVTG----- 54

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              +   +  + +K   L   IN +G   D+ +L  Y  +++S +P   L   +  +  Y
Sbjct: 55  --NSNEQAKLITVKTDVLDLRINTQGGTIDEADLLAYPAELNSKTPFRLL--ETTPQFLY 110

Query: 121 FAELDYVSTANNIELPNSNTVWNLIS---GKILTPTTPIKLVFKNANNILFERTISLDEH 177
            A+   +      +               G+                    +  I     
Sbjct: 111 QAQSGLIGPDGPDQKSRPVYSATQQEFILGENQDELRVPMTFVNEEGVKFVKTFILKKGQ 170

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
           Y   I   V N +   +  +  G++ +         T ++ F +     A         +
Sbjct: 171 YDIGIEYKVENPTDKTLTMNFYGQLKQSVKLPEHRDTGSSNFALHTYRGAAYSSDETNYK 230

Query: 233 KY 234
           KY
Sbjct: 231 KY 232


>gi|297694703|ref|XP_002824610.1| PREDICTED: mitochondrial inner membrane protein OXA1L [Pongo
           abelii]
          Length = 435

 Score = 95.4 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 83/231 (35%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ + + +L   +  AI   TVF + L FPL        A + N  P+I 
Sbjct: 118 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 177

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++          +         K H I         + Q P+F + +  +   
Sbjct: 178 KFSSRIREAKLAGDHIEYYKASSEMAFYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 237

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + I P+ ++ +M+  ++
Sbjct: 238 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 278

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         ++  MP++ +     FP  + +YW  SN+ S+VQ
Sbjct: 279 LGAETGVQSSDLQWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 329


>gi|296141904|ref|YP_003649147.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella
           paurometabola DSM 20162]
 gi|296030038|gb|ADG80808.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella
           paurometabola DSM 20162]
          Length = 390

 Score = 95.4 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 55/276 (19%), Positives = 99/276 (35%), Gaps = 55/276 (19%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           + ++++   + ++ + +    +Q  +T  M+  QP++  LR+K+     Q L   M +L 
Sbjct: 39  WALSVIFLVLTLRAILYKPFVRQIRTTRQMQEFQPQMQALRKKY-GKDRQKLALEMQKLQ 97

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVI------------------SISLEMRH-APFWG 460
           K H  NPL GC P LLQ+PVF  ++ V+                    + E RH A ++ 
Sbjct: 98  KEHGFNPLLGCLPALLQVPVFIGLFHVLRSFNRMAGGATQMFGSPDMTAYETRHTANYFF 157

Query: 461 WIKDLA------------------------AADPTNIFTLFGILPFYLPGFMHVGI-WPI 495
              D+                         A  P NI   +    F     + + +   I
Sbjct: 158 SATDVQSFLDARLFGVPLSSYVQEPVAQFQAFMPVNINNDYIAPNFEKWQILALSVPLMI 217

Query: 496 IMSLSMFIQMKMSPPPA-----DKGQAMILN-----WMPVVFVFALSSFPAGLIIYWSWS 545
           + +L+     + S         D  Q  I+N       P+  +      P  ++IYW   
Sbjct: 218 VAALATHFNARASIARQPVASLDNPQTAIMNRLMLWVFPIGVLVGGFFLPVAILIYWVTQ 277

Query: 546 NVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           N+ +  QQ ++      E     RL          +
Sbjct: 278 NIWTYCQQHIVFGKLDKEDEEKKRLAQEKRAENAPK 313


>gi|259503597|ref|ZP_05746499.1| membrane protein OxaA 2 [Lactobacillus antri DSM 16041]
 gi|259168421|gb|EEW52916.1| membrane protein OxaA 2 [Lactobacillus antri DSM 16041]
          Length = 314

 Score = 95.4 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 104/252 (41%), Gaps = 35/252 (13%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + ++AKPM  LM +   +L  N+G AI++  V V+ +  P+   Q   +   +    K+ 
Sbjct: 36  YDYMAKPMQHLMEWLAAHLGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTITQEKMAKVQ 95

Query: 398 EL--------REKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
            L        +          + + M+ LY+ +NI+     GC P+L+Q+PVF A+Y  I
Sbjct: 96  PLIKELSEKQKAAQTPEEQAAVSQQMMALYRDNNISITGGIGCLPLLIQLPVFAALYAAI 155

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S ++ HA F+G    +A   P+ +  +   + +    ++ +   P             
Sbjct: 156 RYSPDLYHAEFFG----IALGKPSILLAVLSFIAYAAQSYLGLVGVP------------- 198

Query: 508 SPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
                 K Q  +  WM P +  F   +  AGL +Y+    + +I+Q  ++         +
Sbjct: 199 ---EEQKKQMKMAIWMSPFMTFFISLTSSAGLGLYFFIGGLFAILQTIMVN---AYRPRI 252

Query: 567 IDRLRSTFSKNY 578
             R+      + 
Sbjct: 253 RQRIEEESKNHP 264


>gi|296139617|ref|YP_003646860.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella
           paurometabola DSM 20162]
 gi|296027751|gb|ADG78521.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella
           paurometabola DSM 20162]
          Length = 287

 Score = 95.4 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 88/242 (36%), Gaps = 48/242 (19%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           + ++++     V+ +          +   ++ ++P++D+LR K     PQ L     +L 
Sbjct: 32  WALSVVFLVFTVRAVLLWPGLVSARAGRRLERMRPELDKLRRKH-GKDPQKLALETQKLQ 90

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVI-------------------------------- 447
           + H + PL GC P L QIPVFF +Y V+                                
Sbjct: 91  REHGVRPLLGCLPALAQIPVFFGLYHVLRSFNRTGTGLGQLGLTPDQNANTANYVFSATD 150

Query: 448 ---SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
               +S  +  AP    I   ++      F  FG +P              I  L+  I 
Sbjct: 151 VQSFLSARLFGAPISVSIS--SSDTVLASFAQFGGIPSLTTIAAVAIPLMAIACLATHIN 208

Query: 505 MKMSP--PPADKGQAM--------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
            + S      D   AM        +L  MP+  + +    P  +++YW  +NV +  QQ 
Sbjct: 209 ARFSVRHQAIDPTSAMQSDLMRTLMLWVMPLGSIISGPILPIAILLYWVANNVWTYGQQQ 268

Query: 555 VI 556
           ++
Sbjct: 269 LV 270


>gi|91095209|ref|XP_968413.1| PREDICTED: similar to cytochrome oxidase biogenesis protein (oxa1
           mitochondrial) [Tribolium castaneum]
 gi|270015977|gb|EFA12425.1| hypothetical protein TcasGA2_TC001816 [Tribolium castaneum]
          Length = 436

 Score = 95.1 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 93/258 (36%), Gaps = 41/258 (15%)

Query: 314 EFPTIHHYEKDLAIPRF-EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
               I      L  P F  + +       IA+  F  +    NL   +  AI++ T+ ++
Sbjct: 113 TVSEIVSQVNALGEPTFASLGLGGKTPVGIAQTCFEYLHI--NLGVPWWEAIVIGTLVIR 170

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNIN 425
           +  FPL      + A M N  P++  ++ K  ++             + ++   K   +N
Sbjct: 171 ICLFPLVIIAQRNAAKMNNYMPQLQAIQLKMTEARQSGNQLEVARYSQELMIFMKEKQLN 230

Query: 426 PLAGCWPILLQIPVFFAIYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           PL      L Q+PVF + +  +       +E        W  DL   D   +        
Sbjct: 231 PLKNMIVPLAQMPVFVSFFMALREMSNVPIESLRTGGLWWFTDLTVPDQYFLM------- 283

Query: 482 FYLPGFMHVGIWPIIMSLSMFI-------QMKMSPPPADKGQAMILNWMPVVFVFALSSF 534
                       P+I S ++F          K+S          +L  +PV+ +    +F
Sbjct: 284 ------------PLITSATLFATIELGTDTAKLSSQNLQTM-KYVLRAVPVIVLPFTINF 330

Query: 535 PAGLIIYWSWSNVISIVQ 552
           P  ++ YW  SN IS++Q
Sbjct: 331 PGAILCYWVSSNFISLLQ 348


>gi|126438349|ref|YP_001074040.1| putative inner membrane protein translocase component YidC
           [Mycobacterium sp. JLS]
 gi|126238149|gb|ABO01550.1| 60 kDa inner membrane insertion protein [Mycobacterium sp. JLS]
          Length = 367

 Score = 95.1 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 94/270 (34%), Gaps = 39/270 (14%)

Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384
                 +++                     +    + +++M     ++ + +    +Q  
Sbjct: 2   FNWFSLDIIYYPVSAIMWVWYKAFAFLLGPDNFFAWALSVMFLVFTLRAILYKPFVRQIR 61

Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
           +T  M+ +QP+I  L++K+     Q +   M +L K H  NP+ GC P+L QIPVF  +Y
Sbjct: 62  TTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQKEHGFNPILGCLPMLAQIPVFLGLY 120

Query: 445 KVISI-------------SLE--------MRHAPFWGWIKD---LAAADPTNIFTLFGIL 480
            V+               S+E        +  A   G   D     A     +    G+ 
Sbjct: 121 HVLMSFNRTQTGIGRLGLSVEENRSLPNYLFSATDVGHFLDANLFGAPLGATMIQQHGLE 180

Query: 481 PFY----LPGFMHVGIWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMPVV 526
            F     +   +      ++  ++          + +P  A   Q  ++        P+ 
Sbjct: 181 AFTEFNRVAVVVVGVPIMLLAGIATHFNSRASVARQTPEAAANPQTALMNKLALYVFPLG 240

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            V      P  +I+YW  +N+ +  QQ  +
Sbjct: 241 VVVGGPFLPLAVIMYWLANNIWTYGQQHYV 270


>gi|125974852|ref|YP_001038762.1| protein translocase subunit yidC [Clostridium thermocellum ATCC
           27405]
 gi|256003891|ref|ZP_05428878.1| 60 kDa inner membrane insertion protein [Clostridium thermocellum
           DSM 2360]
 gi|281418693|ref|ZP_06249712.1| membrane protein insertase, YidC/Oxa1 family [Clostridium
           thermocellum JW20]
 gi|125715077|gb|ABN53569.1| protein translocase subunit yidC [Clostridium thermocellum ATCC
           27405]
 gi|255992229|gb|EEU02324.1| 60 kDa inner membrane insertion protein [Clostridium thermocellum
           DSM 2360]
 gi|281407777|gb|EFB38036.1| membrane protein insertase, YidC/Oxa1 family [Clostridium
           thermocellum JW20]
 gi|316941974|gb|ADU76008.1| membrane protein insertase, YidC/Oxa1 family [Clostridium
           thermocellum DSM 1313]
          Length = 291

 Score = 95.1 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 106/268 (39%), Gaps = 60/268 (22%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
            G++G+AI+L TVF+KLL  PL+ KQY S+  M+ +QP I E++ K+K   PQ   + ++
Sbjct: 21  FGSYGLAIILFTVFIKLLLLPLSIKQYKSSLKMQEMQPLIQEIQRKYKN-DPQKQSEELM 79

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL----------------EMRHAPFWG 460
            LYK HN +P +GC    +Q+P+  ++Y VI   L                ++  A    
Sbjct: 80  NLYKEHNFSPASGCLTSFIQLPIIVSLYYVIREPLTYMFNMTKDQIEALVNQLNQAANGL 139

Query: 461 W-IKDLAAADPT----------------NIFTLFGILP-----FYLPGFMHVGIWPIIMS 498
             I   +                      I    G +P       +  ++ + + P++  
Sbjct: 140 PQINTRSIYFQIEAALRSGKLDVVEELGFIKFDLGKIPKLNFTEDVATYLPLLLIPVLAI 199

Query: 499 LSMFIQMKMSPPPAD---------------------KGQAMILNWMPVVFVFALSSFPAG 537
           ++ +   KM                                ++   PV+        PA 
Sbjct: 200 VATYFSSKMMMKRTQSLRSSTNSKKSKNQSQDDMTAAMNKSMMWIAPVMTGIISFQAPAA 259

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           L +YW  SNV  I+Q+ +I K    +  
Sbjct: 260 LGLYWLTSNVFQIIQEFIINKFIMKKKE 287


>gi|57089985|ref|XP_537362.1| PREDICTED: similar to Inner membrane protein OXA1L, mitochondrial
           precursor (Oxidase assembly 1-like protein) (OXA1-like
           protein) (OXA1Hs) (Hsa) isoform 1 [Canis familiaris]
          Length = 435

 Score = 95.1 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 85/231 (36%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ + + NL   +  AI   TV  + L FPL  K     A + N  P+I 
Sbjct: 117 SYTPVGLIQNLLEFMHVNLGLPWWGAIAACTVLARCLVFPLIVKGQREAAKIHNHLPEIQ 176

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++     Q    +         K H++         L Q P+F + +  +   
Sbjct: 177 KFSTRIREAKLAGDQAEFYKASSEMTFYQKKHDVKLFRPLILPLTQAPIFISFFIALREM 236

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF---- 502
             +           W +DL  +DPT                    I P++++ +M+    
Sbjct: 237 ANLPVPSLQTGGLLWFQDLTLSDPTY-------------------ILPLVVTATMWGVLE 277

Query: 503 IQMKMSPPPAD-KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +  +     +D +    ++  MP+  +     FP  + +YW  SN+ S+ Q
Sbjct: 278 LGAETGMQSSDLQWMRNLIRVMPLAVLPITIHFPTAVFMYWLSSNMFSLGQ 328


>gi|28193182|emb|CAD62333.1| unnamed protein product [Homo sapiens]
          Length = 419

 Score = 95.1 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ + + +L   +  AI   TVF + L FPL        A + N  P+I 
Sbjct: 102 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 161

Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++               + LY K H I         + Q P+F + +  +   
Sbjct: 162 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 221

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + I P+ ++ +M+  ++
Sbjct: 222 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 262

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         ++  MP++ +     FP  + +YW  SN+ S+VQ
Sbjct: 263 LGAETGVQSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 313


>gi|331265654|ref|YP_004325284.1| Preprotein translocase subunit YidC2 [Streptococcus oralis Uo5]
 gi|326682326|emb|CBY99943.1| Preprotein translocase subunit YidC2 [Streptococcus oralis Uo5]
          Length = 309

 Score = 95.1 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 77/212 (36%), Gaps = 30/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQKRLKEATTQEEKLEAQQALWDTQKEHGISVFGGVGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+Q+P F AIY     +  +  + F G   +L +     +    GIL +        G+
Sbjct: 143 ILIQMPFFSAIYFAAQYTDGVASSTFLG--INLGSP-SLLLVAFAGILYYLQSLLSLHGV 199

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
                               D+ Q      ++   P++ V      PA + +YW     +
Sbjct: 200 -------------------EDEMQREQLKKMIYMSPLMIVVFSFFAPASVTLYWVVGGFM 240

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            I+QQ ++   +     L  ++R  F+KN   
Sbjct: 241 MILQQFIVN--YVVRPKLRKKVREEFAKNPPK 270


>gi|307710735|ref|ZP_07647163.1| membrane protein oxaA 1 [Streptococcus mitis SK321]
 gi|307617341|gb|EFN96513.1| membrane protein oxaA 1 [Streptococcus mitis SK321]
          Length = 308

 Score = 95.1 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 76/209 (36%), Gaps = 24/209 (11%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           ILLQ+P F AIY     +  +  A + G                   +P   P  + V  
Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551
             I+  L   + +        + Q   + +M P++ V      PA + +YW     + I+
Sbjct: 184 AGILYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243

Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           QQ ++   +     L  ++R   +KN   
Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPPK 270


>gi|301781256|ref|XP_002926062.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial inner membrane
           protein OXA1L-like [Ailuropoda melanoleuca]
          Length = 637

 Score = 95.1 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 84/231 (36%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ + + NL   +  AI   T+  + L FPL  K     A + N  P+I 
Sbjct: 321 SYTPVGLIQNLLEFMHVNLGLPWWGAIAACTILARCLVFPLIVKGQREAAKIHNHLPEIQ 380

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++          +         K ++I         L Q P+F + +  +   
Sbjct: 381 KFSTRMREAKLAGDHAEFYKASSEMTFYQKKYDIKLFRPLILPLTQAPIFISFFIALREM 440

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + + P++++ +M+  ++
Sbjct: 441 ANLPVPSLQTGGLLWFQDLTLSDP-------------------IYVLPLVVTATMWGVLE 481

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         ++  MP+  +     FP  + +YW  SN+ S+VQ
Sbjct: 482 LGAETGVQSSDLQWMRNVIRVMPLAVLPITIHFPTAVFMYWLSSNMFSLVQ 532


>gi|194016676|ref|ZP_03055289.1| Oxa1 family cytochrome oxidase biogenesis protein [Bacillus pumilus
           ATCC 7061]
 gi|194011282|gb|EDW20851.1| Oxa1 family cytochrome oxidase biogenesis protein [Bacillus pumilus
           ATCC 7061]
          Length = 272

 Score = 95.1 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ------ 393
           YF+     +++        ++G++IM  T+ V+LL FPL   Q+     M+         
Sbjct: 38  YFVQPFSELIIWLANFFHDDYGLSIMFVTLIVRLLIFPLFANQFKKQRVMQEKMALVKPQ 97

Query: 394 --PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISIS 450
                 +L++  +    + LQ  M+++YK +N+NPL  GC P+L+QIP+    Y  I  +
Sbjct: 98  IDEIQSKLKKTKEPEKQKELQMEMMKVYKENNVNPLAMGCLPMLIQIPIVLGFYSAIRST 157

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSM-FIQMKMS 508
            E+                 T+ F  F +    L   +  G    +   ++  F +   +
Sbjct: 158 PEIA----------------THSFLWFNLGQTDLLVAIFAGAMYFLQFYVTQRFAKQSGT 201

Query: 509 PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
              A   QA ++    P++ +F   + PA L +YW  S ++  +Q  ++ 
Sbjct: 202 QTEAALKQAKVMGMIFPIMMLFISINAPAALPLYWMTSGLLLTIQTIILN 251


>gi|114652033|ref|XP_001156862.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
          Length = 419

 Score = 95.1 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ + + +L   +  AI   TVF + L FPL        A + N  P+I 
Sbjct: 102 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 161

Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++               + LY K H I         + Q P+F + +  +   
Sbjct: 162 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 221

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + I P+ ++ +M+  ++
Sbjct: 222 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 262

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +      +         ++  MP++ +     FP  + +YW  SN+ S+VQ
Sbjct: 263 LGAETGVQSSDLQWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 313


>gi|15807143|ref|NP_295872.1| inner membrane protein, 60 kDa [Deinococcus radiodurans R1]
 gi|38503229|sp|Q9RSH5|OXAA_DEIRA RecName: Full=Membrane protein oxaA
 gi|6459947|gb|AAF11697.1|AE002049_2 inner membrane protein, 60 kDa, putative [Deinococcus radiodurans
           R1]
          Length = 428

 Score = 95.1 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 75/399 (18%), Positives = 144/399 (36%), Gaps = 59/399 (14%)

Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
                   +      + +       ++   +   V N    Q+     G      P+   
Sbjct: 36  NRQDAVFRYAQNGVQVTKTITLHPRNFKVDVRTEVRN-GPAQVNMLFPGLGKADNPRVQA 94

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
              G Q   +   G  S+   +Y+ ++++     H                 I   +   
Sbjct: 95  VPVGGQPASVQGSGTLSVQNIQYAALQENPSQIAH---------------ALIVRPQQGT 139

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331
               +          A   A     + G      +   +G  E P +             
Sbjct: 140 KVDVQLTGGPQGLVTATLPATSSLEVYGGKNELIHLYQSGYTELPGLFQPN--------- 190

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
                 +F  I+  +  LM   Y ++GN+G+ IM  T+ ++L+ +PL + Q  +TA M+ 
Sbjct: 191 ------FFGQISLLIVKLMEALYKVIGNWGLVIMALTILLRLVMWPLMQAQGRTTARMQL 244

Query: 392 IQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           +QP   E++EK+K        + +Q  M QL + + +NP  GC+  LL  PV  A++  I
Sbjct: 245 VQPLQKEIQEKYKGKTDPESQRAMQMEMAQLMRDYQVNPA-GCFSTLLPFPVLIALWATI 303

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
               E      + W+ DLA  DP  I  +  +       F+++G          ++  + 
Sbjct: 304 RN-FEF--DSGFLWLPDLATPDPFYILAVIYL-------FVNLGQL--------YVSTRK 345

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546
           +P      Q  ++    +VF++   +FP+G+ +Y   S 
Sbjct: 346 TPEMF--RQQAMIY---LVFLYFALTFPSGVTLYIILST 379


>gi|226308231|ref|YP_002768191.1| OxaA family protein [Rhodococcus erythropolis PR4]
 gi|226187348|dbj|BAH35452.1| putative OxaA family protein [Rhodococcus erythropolis PR4]
          Length = 318

 Score = 95.1 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 54/268 (20%), Positives = 99/268 (36%), Gaps = 46/268 (17%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           +    +F L+S   +    + ++++     +K L F    KQ  +   M+ +QP+I  L+
Sbjct: 14  WFWHKVFSLISGSPDNGVVWALSVVFLVFTLKALLFKPFVKQVRTQLVMQKLQPQIKALQ 73

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEMRHAP 457
           +K+     Q L   M +L K HN +PL GC P+L+Q PVF  +Y V+     +    H P
Sbjct: 74  KKYSG-DRQKLTVEMAKLQKEHNYSPLLGCLPMLVQAPVFIGLYHVLRSFNRTGAASHVP 132

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFY--------------------------------LP 485
           F    + ++ AD  N    F                                      + 
Sbjct: 133 FLSPTEPMSVADNANTANYFFSASDVQSFLDAKLFGAPLSAMISSPAAQLEAFGDVSRIS 192

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----QAMILN-----WMPVVFVFALSSFP 535
             +      I  +++     + S            Q  I+N       PV  +   +  P
Sbjct: 193 IILVAVPLMIFAAVATHFTSRASIARQVDTGTVNPQTAIMNKLALWVFPVGVIAFGAFAP 252

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             +++Y+  +N  ++ QQ ++     AE
Sbjct: 253 VAILLYFVSNNCWTLGQQHLVYGRIAAE 280


>gi|321475104|gb|EFX86068.1| hypothetical protein DAPPUDRAFT_193442 [Daphnia pulex]
          Length = 444

 Score = 95.1 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 82/231 (35%), Gaps = 37/231 (16%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              +  +  ++ + +  V       I +    V+ L FPL  K   + A M N  P++  
Sbjct: 135 MSPSGLIQSILEWLHIGVDLPWWGCIAIGVFTVRTLMFPLVIKAQRNAAKMTNNMPQLQV 194

Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---- 447
           L++K   +           +   +    K   +NPL      L+Q PVF + +  +    
Sbjct: 195 LQQKMTDARQAGNAMEAARMGYEIQSFMKEKGLNPLKNLMVPLIQAPVFMSFFFALKGMA 254

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +  +E        W  DL   DP                     I P++ S++++  M++
Sbjct: 255 NAPVESMQYGGLFWFSDLTVCDPYY-------------------ILPMLTSVTVWATMEL 295

Query: 508 SPPPADKGQAMI------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
               A                +P +      +F   ++ YW  +NVIS+VQ
Sbjct: 296 GADSAKLSSQGFPLLIYFFRAIPFIMFPITMNFSGAILCYWLTTNVISLVQ 346


>gi|302753696|ref|XP_002960272.1| hypothetical protein SELMODRAFT_73518 [Selaginella moellendorffii]
 gi|300171211|gb|EFJ37811.1| hypothetical protein SELMODRAFT_73518 [Selaginella moellendorffii]
          Length = 315

 Score = 95.1 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 34/248 (13%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
              F + A   +++ +        + ++I LTTV V+ +  PL   Q  STA    ++P 
Sbjct: 42  SESFPWTAAVQYVIYATHVVTGLPWWLSIALTTVAVRTMVLPLVIYQVKSTARFALLRPD 101

Query: 396 IDELREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +++++   +Q+          ++ M +L+  H  +P       LLQ P+F   +  +   
Sbjct: 102 LEKIKVDMEQANYDPVALAENKRKMAELFAKHKTDPFTPLIGALLQGPIFMCFFFGLRTM 161

Query: 451 LE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
            E           W  DL   D                      I P I + +  I +++
Sbjct: 162 AEKMDSFKEGGAFWFTDLTTPDELY-------------------ILPFITTATFLITVEL 202

Query: 508 SP------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-MKMH 560
           +        P  K    IL  M V+F+   + FP  L  YW  SN+ S++Q A++  K  
Sbjct: 203 NAVDGMQGQPNQKTMKNILRGMGVLFLPLTAQFPKALFCYWVTSNLWSMLQGALLRNKKF 262

Query: 561 GAEIGLID 568
            A + + D
Sbjct: 263 KAYLDIPD 270


>gi|322387091|ref|ZP_08060702.1| SpoIIIJ family protein [Streptococcus infantis ATCC 700779]
 gi|321142078|gb|EFX37572.1| SpoIIIJ family protein [Streptococcus infantis ATCC 700779]
          Length = 308

 Score = 95.1 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 79/209 (37%), Gaps = 24/209 (11%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQTRLKEAETQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +L+Q+P F AIY     +  +  A F G    +A   P+ I   F  + +Y+   +    
Sbjct: 143 LLIQMPFFSAIYFAAQHTEGVSEASFLG----IALGSPSWILIAFAGILYYVQSLLS--- 195

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIV 551
              +  +              + Q   + +M  + +   S F PA + +YW     + I+
Sbjct: 196 ---LHGV---------EDETQREQLKKMIYMSPMMIVMFSIFSPASVTLYWVVGGFMMIL 243

Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           QQ ++   +     L  ++R   +KN   
Sbjct: 244 QQFIVN--YIIRPKLRKKVREELAKNPPK 270


>gi|328774396|gb|EGF84433.1| hypothetical protein BATDEDRAFT_34302 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 459

 Score = 94.7 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 38/266 (14%)

Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI--AIML 366
            A       +       AI +   L   G   +    +F ++S +  +         I+ 
Sbjct: 153 IAEGTNIGDLMTETALGAITQIGDLHSLGLANYNPVGLFQIISEYIYVYSGMPWWATIVA 212

Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ-------SPPQVLQKAMIQLY 419
            T+ V+++  PLA K  V+ A +  ++PK D ++++          +  Q   + + Q+Y
Sbjct: 213 LTIIVRIIVAPLAIKAQVAGAVLGGLRPKTDPIQKRVTHLRSIGDTAGSQREAQKLFQVY 272

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFT 475
           K +NI+PL      ++Q P+F +++  I    E+         +GWI +L+ ADPT    
Sbjct: 273 KDNNISPL-SIGWGIIQAPIFISVFMAIKYMAELPVPGFTTGGFGWITNLSTADPTY--- 328

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWM---PVVFVFA 530
                           I PI+ S+ M I M+ SP    +    AMIL  M    VV +  
Sbjct: 329 ----------------ILPILSSIGMLITMEYSPKLTGSPPQSAMILMIMRVASVVMIPV 372

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVI 556
           +   P  + IY   S V+ I Q  ++
Sbjct: 373 MGGLPVAVFIYMLVSTVLMIAQMYLL 398


>gi|213418901|ref|ZP_03351967.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E01-6750]
          Length = 246

 Score = 94.7 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 75/255 (29%), Gaps = 23/255 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229
              Y   +  +V N     +  S  G++ +         T ++ F +     A       
Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228

Query: 230 VEQKYSDIEKSSISN 244
             +KY     +   N
Sbjct: 229 KYEKYKFDTIADNEN 243


>gi|157692895|ref|YP_001487357.1| OxaA-like protein precursor [Bacillus pumilus SAFR-032]
 gi|157681653|gb|ABV62797.1| Oxa1 family cytochrome oxidase biogenesis protein [Bacillus pumilus
           SAFR-032]
          Length = 272

 Score = 94.7 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 28/230 (12%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ------ 393
           YF+     +++        ++G++IM  T+ V+LL FPL   Q+     M+         
Sbjct: 38  YFVQPFSELIIWLANFFHDDYGLSIMFVTLIVRLLIFPLFANQFKKQRVMQEKMALVKPQ 97

Query: 394 --PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISIS 450
                 +L++  +    + LQ  M+++YK +N+NPL  GC P+L+QIP+    Y  I  +
Sbjct: 98  IDDIQSKLKKTKEPEKQKELQMEMMKVYKENNVNPLAMGCLPMLIQIPIVLGFYSAIRST 157

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSM-FIQMKMS 508
            E+                 T+ F  F +    L   +  G    +   ++  F +   +
Sbjct: 158 PEIA----------------THSFLWFNLGQTDLLVAIFAGAMYFLQFYVTQRFAKQSGT 201

Query: 509 PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
              A   QA ++    P++ +F   + PA L +YW  S ++  VQ  ++ 
Sbjct: 202 QTEAALKQAKVMGMIFPIMMLFISINAPAALPLYWMTSGLLLTVQTIILN 251


>gi|306824473|ref|ZP_07457819.1| SpoIIIJ family protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304433260|gb|EFM36230.1| SpoIIIJ family protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 312

 Score = 94.7 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 79/212 (37%), Gaps = 30/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K + I+     GC+P
Sbjct: 86  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKENGISMFGGVGCFP 145

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+Q+P F AIY     +  +  + F G    ++   P+ I   F  + +YL   + +  
Sbjct: 146 ILIQMPFFSAIYFAAQYTDGVSSSTFLG----ISLGSPSMILVAFAGILYYLQSLLSLH- 200

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
                               D+ Q      ++   P++ V      PA + +YW     +
Sbjct: 201 -----------------GVEDEMQRDQLKKMIYMSPLMIVVFSLFAPASVTLYWVVGGFM 243

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            I+QQ ++   +     L  ++R  F+KN   
Sbjct: 244 MILQQFIVN--YVVRPKLRQKVREEFAKNPPK 273


>gi|148985555|ref|ZP_01818744.1| OxaA-like protein precursor [Streptococcus pneumoniae SP3-BS71]
 gi|168492050|ref|ZP_02716193.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC0288-04]
 gi|147922275|gb|EDK73396.1| OxaA-like protein precursor [Streptococcus pneumoniae SP3-BS71]
 gi|183573673|gb|EDT94201.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC0288-04]
 gi|301800737|emb|CBW33385.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae OXC141]
          Length = 308

 Score = 94.3 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 76/209 (36%), Gaps = 24/209 (11%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           ILLQ+P F AIY     +  +  A + G                   +P   P  + V  
Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551
             ++  L   + +        + Q   + +M P++ V      PA + +YW     + I+
Sbjct: 184 AGVLYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243

Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           QQ ++   +     L  ++R   +KN   
Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPPK 270


>gi|15901798|ref|NP_346402.1| OxaA-like protein precursor [Streptococcus pneumoniae TIGR4]
 gi|111658862|ref|ZP_01409483.1| hypothetical protein SpneT_02000033 [Streptococcus pneumoniae
           TIGR4]
 gi|148993164|ref|ZP_01822730.1| OxaA-like protein precursor [Streptococcus pneumoniae SP9-BS68]
 gi|149007450|ref|ZP_01831093.1| OxaA-like protein precursor [Streptococcus pneumoniae SP18-BS74]
 gi|168489980|ref|ZP_02714179.1| membrane protein OxaA 2 [Streptococcus pneumoniae SP195]
 gi|182684910|ref|YP_001836657.1| oxaA-like protein precursor [Streptococcus pneumoniae CGSP14]
 gi|225859731|ref|YP_002741241.1| OxaA-like protein precursor [Streptococcus pneumoniae 70585]
 gi|225861793|ref|YP_002743302.1| OxaA-like protein precursor [Streptococcus pneumoniae Taiwan19F-14]
 gi|303254101|ref|ZP_07340216.1| OxaA-like protein precursor [Streptococcus pneumoniae BS455]
 gi|303260348|ref|ZP_07346318.1| oxaA-like protein precursor [Streptococcus pneumoniae SP-BS293]
 gi|303262496|ref|ZP_07348438.1| oxaA-like protein precursor [Streptococcus pneumoniae SP14-BS292]
 gi|303265127|ref|ZP_07351040.1| oxaA-like protein precursor [Streptococcus pneumoniae BS397]
 gi|303266011|ref|ZP_07351906.1| oxaA-like protein precursor [Streptococcus pneumoniae BS457]
 gi|303268057|ref|ZP_07353858.1| oxaA-like protein precursor [Streptococcus pneumoniae BS458]
 gi|307128174|ref|YP_003880205.1| membrane protein OxaA 2 [Streptococcus pneumoniae 670-6B]
 gi|38503145|sp|Q97NP5|OXAA2_STRPN RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|254778167|sp|C1CTN0|OXAA_STRZT RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|14973482|gb|AAK76042.1| SpoIIIJ family protein [Streptococcus pneumoniae TIGR4]
 gi|147761022|gb|EDK67991.1| OxaA-like protein precursor [Streptococcus pneumoniae SP18-BS74]
 gi|147928138|gb|EDK79156.1| OxaA-like protein precursor [Streptococcus pneumoniae SP9-BS68]
 gi|182630244|gb|ACB91192.1| oxaA-like protein precursor [Streptococcus pneumoniae CGSP14]
 gi|183571634|gb|EDT92162.1| membrane protein OxaA 2 [Streptococcus pneumoniae SP195]
 gi|225721166|gb|ACO17020.1| membrane protein OxaA 2 [Streptococcus pneumoniae 70585]
 gi|225727287|gb|ACO23138.1| membrane protein OxaA 2 [Streptococcus pneumoniae Taiwan19F-14]
 gi|301802653|emb|CBW35419.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae INV200]
 gi|302598934|gb|EFL65965.1| OxaA-like protein precursor [Streptococcus pneumoniae BS455]
 gi|302636396|gb|EFL66889.1| oxaA-like protein precursor [Streptococcus pneumoniae SP14-BS292]
 gi|302638514|gb|EFL68979.1| oxaA-like protein precursor [Streptococcus pneumoniae SP-BS293]
 gi|302642417|gb|EFL72763.1| oxaA-like protein precursor [Streptococcus pneumoniae BS458]
 gi|302644452|gb|EFL74704.1| oxaA-like protein precursor [Streptococcus pneumoniae BS457]
 gi|302645344|gb|EFL75578.1| oxaA-like protein precursor [Streptococcus pneumoniae BS397]
 gi|306485236|gb|ADM92105.1| membrane protein OxaA 2 [Streptococcus pneumoniae 670-6B]
 gi|327389140|gb|EGE87486.1| 60Kd inner membrane family protein [Streptococcus pneumoniae
           GA04375]
 gi|332071953|gb|EGI82441.1| 60Kd inner membrane family protein [Streptococcus pneumoniae
           GA17545]
 gi|332072057|gb|EGI82544.1| 60Kd inner membrane family protein [Streptococcus pneumoniae
           GA17570]
          Length = 308

 Score = 94.3 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 76/209 (36%), Gaps = 24/209 (11%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           ILLQ+P F AIY     +  +  A + G                   +P   P  + V  
Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551
             ++  L   + +        + Q   + +M P++ V      PA + +YW     + I+
Sbjct: 184 AGVLYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243

Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           QQ ++   +     L  ++R   +KN   
Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPPK 270


>gi|322375832|ref|ZP_08050343.1| SpoIIIJ family protein [Streptococcus sp. C300]
 gi|321279100|gb|EFX56142.1| SpoIIIJ family protein [Streptococcus sp. C300]
          Length = 309

 Score = 94.3 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 78/212 (36%), Gaps = 30/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQKRLKEATTQEEKLEAQQALWDTQKEHGISVFGGVGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IL+Q+P F AIY     +  +  +  +  I   +   P+ I   F  + +YL   + +  
Sbjct: 143 ILIQMPFFSAIYFAAQYTDGVA-SSTFLGINLGS---PSMILVAFAGILYYLQSLLSLH- 197

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
                               D+ Q      ++   P++ V      PA + +YW     +
Sbjct: 198 -----------------GVEDEMQREQLKKMIYMSPLMIVVFSFFAPASVTLYWVVGGFM 240

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            I+QQ ++   +     L  ++R  F+KN   
Sbjct: 241 MILQQFIVN--YVVRPKLRKKVREEFAKNPPK 270


>gi|149012436|ref|ZP_01833467.1| OxaA-like protein precursor [Streptococcus pneumoniae SP19-BS75]
 gi|168494784|ref|ZP_02718927.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC3059-06]
 gi|221232700|ref|YP_002511854.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae ATCC
           700669]
 gi|298230172|ref|ZP_06963853.1| OxaA-like protein precursor [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254778|ref|ZP_06978364.1| OxaA-like protein precursor [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298503746|ref|YP_003725686.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus
           pneumoniae TCH8431/19A]
 gi|147763492|gb|EDK70428.1| OxaA-like protein precursor [Streptococcus pneumoniae SP19-BS75]
 gi|183575319|gb|EDT95847.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC3059-06]
 gi|220675162|emb|CAR69746.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae ATCC
           700669]
 gi|298239341|gb|ADI70472.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus
           pneumoniae TCH8431/19A]
          Length = 308

 Score = 94.3 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 76/209 (36%), Gaps = 24/209 (11%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           ILLQ+P F AIY     +  +  A + G                   +P   P  + V  
Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551
             ++  L   + +        + Q   + +M P++ V      PA + +YW     + I+
Sbjct: 184 AGVLYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243

Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           QQ ++   +     L  ++R   +KN   
Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPPK 270


>gi|154486340|ref|ZP_02027747.1| hypothetical protein BIFADO_00149 [Bifidobacterium adolescentis
           L2-32]
 gi|154084203|gb|EDN83248.1| hypothetical protein BIFADO_00149 [Bifidobacterium adolescentis
           L2-32]
          Length = 344

 Score = 94.3 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 115/272 (42%), Gaps = 34/272 (12%)

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP-MFMLMSYFYNLVGNFGIAIMLTTVFV 371
            +   +        + +    ++W     +A    FM+M     +  ++ ++I+   + V
Sbjct: 2   NQDQFLLDSGFWGWLYKLLYPVEWLMTQIMAGFHRFMVMLGMNEIGFSWVMSIVFLVIVV 61

Query: 372 KLLFFPLAKKQYVSTANMK--------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           +   FPL  K       M+         +Q   ++ + K   +  + LQ+ M++LY+ ++
Sbjct: 62  QACVFPLFYKSMKGMRKMQAQMAVLQPKMQRIQNKYKGKNDPASKEALQREMMKLYQDND 121

Query: 424 INPLAGC---WPILLQIPVFFAIYKVISISLEM-----RHAPFWGWIKDLAAADPTNIFT 475
            NP+ GC    P+ +Q PVF  ++  +S    +     R+    G   D+A A       
Sbjct: 122 ANPMGGCTSMLPMFVQGPVFMCMFYTLSAIPYIARGKFRNGSGLGAF-DIATAKQFTSTN 180

Query: 476 LFGIL------PFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMIL 520
           +FG+          + G + +GI+  +M   +++      K +          +    ++
Sbjct: 181 VFGVNVAENFTTADIHGKIIIGIFVALMCFCLWLMQYNSMKRNMAQSAANKQTEMMQKMM 240

Query: 521 NWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551
            WM P++++F+  + P  +++YW  +N+ +++
Sbjct: 241 LWMFPIMYIFSGVAMPFAVLVYWLTNNICNLL 272


>gi|886322|gb|AAB53138.1| ORF312; L222-ORF13; similar to C-terminal 60 kda inner membrane
           proteins of E. coli and Pseudomonas putida; putative
           [Mycobacterium leprae]
          Length = 312

 Score = 94.3 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 95/279 (34%), Gaps = 41/279 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            +++     +               +    + +++M     ++ L +    +Q  +T  +
Sbjct: 11  LDIVYYPVSWIMWVWYKLFAAVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQI 70

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + +QP+I  L+ K+     Q +   M +L + H  NP+ GC P+L QIPVF  +Y  +  
Sbjct: 71  EELQPRIRALQRKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHALRS 129

Query: 450 ---SLEMRHAPFW-------------------------GWIKDLAAADPTNIFTLFGILP 481
              +      P                            W   + A   T    L   + 
Sbjct: 130 FNRTTGGFGQPHMSVTENRMTGNYVFTPVDVGHFLDANLWGAPIGAY-MTQRSGLDAFID 188

Query: 482 FYLPGFMHVGI-WPIIMSLSMFIQMKMS----------PPPADKGQAMILNWMPVVFVFA 530
           F  P  + VGI   ++  ++ +   + S           P       + L   P   V  
Sbjct: 189 FSRPAVILVGIPMMVLAGVATYFNSRASIARQSAEAAENPQTALMNKIALYVFPFGVVVG 248

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
               P  +I+YW  +N+ +  QQ  +  M   E    +R
Sbjct: 249 GPFLPLAIILYWFSNNIWTFGQQHYVFSMIEKEDEAKNR 287


>gi|164656152|ref|XP_001729204.1| hypothetical protein MGL_3671 [Malassezia globosa CBS 7966]
 gi|159103094|gb|EDP41990.1| hypothetical protein MGL_3671 [Malassezia globosa CBS 7966]
          Length = 474

 Score = 94.3 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 93/267 (34%), Gaps = 51/267 (19%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  +  +  L+              I++ T  ++L   PL      ++  + NIQP++  
Sbjct: 138 WSPSGLLQHLLDGVQYYTNLPWWATIIVVTCGIRLAIAPLLVYVQANSIRLSNIQPQMQA 197

Query: 399 LREKFKQSPPQVLQKAMI-------QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           + +  + +     Q+ M        +L   +N +P        +Q+P+F + Y  ++   
Sbjct: 198 MIKDLEYAKSTGNQQEMQNAAINVRKLLSDNNCSPFKSLLLPAVQMPIFLSFYFALTG-- 255

Query: 452 EMRHAP-------FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI- 503
            +  AP          W  DL  ADP                       PII S    + 
Sbjct: 256 -LAKAPLPALTTGGIAWFPDLTLADPYY-------------------ALPIISSAMTLLV 295

Query: 504 --------QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ--- 552
                      M+     +    +L  + V+  + +SSFP+ +++YWS +N  S+ Q   
Sbjct: 296 LETGAETGTTAMNQSSQARFMKNVLRGVTVLAAWLISSFPSAVLLYWSTTNTFSLFQLLA 355

Query: 553 --QAVIMKMHGAEIGLIDRLRSTFSKN 577
                + ++      +   ++    + 
Sbjct: 356 LRTRFLKRLWRLPEKVEHPVKPHIKEK 382


>gi|148998505|ref|ZP_01825946.1| OxaA-like protein precursor [Streptococcus pneumoniae SP11-BS70]
 gi|149021925|ref|ZP_01835912.1| OxaA-like protein precursor [Streptococcus pneumoniae SP23-BS72]
 gi|168487113|ref|ZP_02711621.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1087-00]
 gi|168576625|ref|ZP_02722491.1| membrane protein OxaA 2 [Streptococcus pneumoniae MLV-016]
 gi|225855465|ref|YP_002736977.1| OxaA-like protein precursor [Streptococcus pneumoniae JJA]
 gi|225857549|ref|YP_002739060.1| OxaA-like protein precursor [Streptococcus pneumoniae P1031]
 gi|307068584|ref|YP_003877550.1| preprotein translocase subunit YidC [Streptococcus pneumoniae
           AP200]
 gi|147755698|gb|EDK62744.1| OxaA-like protein precursor [Streptococcus pneumoniae SP11-BS70]
 gi|147929963|gb|EDK80951.1| OxaA-like protein precursor [Streptococcus pneumoniae SP23-BS72]
 gi|183569986|gb|EDT90514.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1087-00]
 gi|183577623|gb|EDT98151.1| membrane protein OxaA 2 [Streptococcus pneumoniae MLV-016]
 gi|225723420|gb|ACO19273.1| membrane protein OxaA 2 [Streptococcus pneumoniae JJA]
 gi|225724602|gb|ACO20454.1| membrane protein OxaA 2 [Streptococcus pneumoniae P1031]
 gi|301794918|emb|CBW37379.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae INV104]
 gi|306410121|gb|ADM85548.1| Preprotein translocase subunit YidC [Streptococcus pneumoniae
           AP200]
 gi|332072161|gb|EGI82647.1| 60Kd inner membrane family protein [Streptococcus pneumoniae
           GA41301]
 gi|332199290|gb|EGJ13368.1| 60Kd inner membrane family protein [Streptococcus pneumoniae
           GA41317]
 gi|332199987|gb|EGJ14061.1| 60Kd inner membrane family protein [Streptococcus pneumoniae
           GA47901]
          Length = 308

 Score = 94.3 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 76/209 (36%), Gaps = 24/209 (11%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           ILLQ+P F AIY     +  +  A + G                   +P   P  + V  
Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551
             ++  L   + +        + Q   + +M P++ V      PA + +YW     + I+
Sbjct: 184 AGVLYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243

Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           QQ ++   +     L  ++R   +KN   
Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPPK 270


>gi|325957280|ref|YP_004292692.1| hypothetical protein LAC30SC_08260 [Lactobacillus acidophilus 30SC]
 gi|325333845|gb|ADZ07753.1| hypothetical protein LAC30SC_08260 [Lactobacillus acidophilus 30SC]
          Length = 322

 Score = 94.3 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 97/268 (36%), Gaps = 47/268 (17%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYVS 385
               G + ++ + +   +        +        G  I++ T  V+L+  PL   Q   
Sbjct: 33  APHSGIYGWVYQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNK 92

Query: 386 TANMKNIQPKIDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCWPIL 434
           +   +    ++          ++ K      Q+       +LY  + ++     GC P++
Sbjct: 93  SVRQQEKMARLQPQMKLIQTAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGMGCLPLI 152

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ + IY+ +  S ++ H+ F+G    L+                         +  
Sbjct: 153 IQLPIMWGIYQAVFYSPQLAHSTFFG--ISLSQK---------------------SVVLA 189

Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISI 550
           I+ ++   IQ  +S     + Q   +  M    P++ +F   SF   L +YW+  N++ I
Sbjct: 190 IVATVFTVIQGYISLIGIPEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMI 249

Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           +QQ ++         +   +     +  
Sbjct: 250 IQQLIVT--FVLTPKVKQHVAEELKEKP 275


>gi|229488335|ref|ZP_04382201.1| putative membrane protein [Rhodococcus erythropolis SK121]
 gi|229323839|gb|EEN89594.1| putative membrane protein [Rhodococcus erythropolis SK121]
          Length = 317

 Score = 93.9 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 54/268 (20%), Positives = 98/268 (36%), Gaps = 46/268 (17%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           +    +F L+S   +    + ++++     +K L F    KQ  +   M+ +QP+I  L+
Sbjct: 14  WFWHKVFSLVSGSPDNGVVWALSVVFLVFTLKALLFKPFVKQVRTQLVMQKLQPQIKALQ 73

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEMRHAP 457
           +K+     Q L   M +L K HN +PL GC P+L+Q PVF  +Y V+     +    H P
Sbjct: 74  KKYSG-DRQKLTVEMAKLQKEHNYSPLLGCLPMLVQAPVFIGLYHVLRSFNRTGAASHVP 132

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFY--------------------------------LP 485
           F    + ++ AD  N    F                                      + 
Sbjct: 133 FLSPTEPMSVADNANTANYFFSASDVQSFLDAKLFGAPLSAMISSPAAQLEAFGDVSRIS 192

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----QAMILN-----WMPVVFVFALSSFP 535
             +      I  +++     + S            Q  I+N       PV  +   +  P
Sbjct: 193 IILVAVPLMIFAAVATHFTSRASIARQVDTGTVNPQTAIMNKLALWVFPVGVIAFGAFAP 252

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             +++Y+  +N  ++ QQ  +     AE
Sbjct: 253 VAILLYFVSNNCWTLGQQHFVYGRIAAE 280


>gi|217964474|ref|YP_002350152.1| membrane protein OxaA 2 [Listeria monocytogenes HCC23]
 gi|217333744|gb|ACK39538.1| membrane protein OxaA 2 [Listeria monocytogenes HCC23]
 gi|307570961|emb|CAR84140.1| inner membrane protein oxaA2 precursor [Listeria monocytogenes L99]
          Length = 275

 Score = 93.9 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 101/253 (39%), Gaps = 39/253 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393
            Y I      +M     + GN+GIAI++TT+ ++ L  PL  +   +   M++       
Sbjct: 36  TYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95

Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449
                   L+    +     +QK M+ +Y  +NINP+  GC P+L+Q+P+  A Y  I  
Sbjct: 96  EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S E+     + W  +L + D                      +  II  L    Q  +S 
Sbjct: 156 SSEIA-EHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192

Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-- 563
                 Q   +  +    P++ +F   + P+ L +YW+   +    Q  +  K++  +  
Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHP 252

Query: 564 -IGLIDRLRSTFS 575
            I ++++    F 
Sbjct: 253 EIKVMEQEEKEFE 265


>gi|119026646|ref|YP_910491.1| membrane protein oxaA [Bifidobacterium adolescentis ATCC 15703]
 gi|118766230|dbj|BAF40409.1| membrane protein oxaA [Bifidobacterium adolescentis ATCC 15703]
          Length = 345

 Score = 93.9 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 115/272 (42%), Gaps = 34/272 (12%)

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP-MFMLMSYFYNLVGNFGIAIMLTTVFV 371
            +   +        + +    ++W     +A    FM+M     +  ++ ++I+   + V
Sbjct: 2   NQDQFLLDSGFWGWLYKLLYPVEWLMTQIMAGFHRFMVMLGMNEIGFSWVMSIVFLVIVV 61

Query: 372 KLLFFPLAKKQYVSTANMK--------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           +   FPL  K       M+         +Q   ++ + K   +  + LQ+ M++LY+ ++
Sbjct: 62  QACVFPLFYKSMKGMRKMQAQMAVLQPKMQRIQNKYKGKNDPASKEALQREMMKLYQDND 121

Query: 424 INPLAGC---WPILLQIPVFFAIYKVISISLEM-----RHAPFWGWIKDLAAADPTNIFT 475
            NP+ GC    P+ +Q PVF  ++  +S    +     R+    G   D+A A       
Sbjct: 122 ANPMGGCTSMLPMFVQGPVFMCMFYTLSAIPYIARGKFRNGSGLGAF-DIATAKQFTSTN 180

Query: 476 LFGIL------PFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMIL 520
           +FG+          + G + +GI+  +M   +++      K +          +    ++
Sbjct: 181 VFGVNVAENFTTADIHGKIIIGIFVALMCFCLWLMQYNSMKRNMAQSAANKQTEMMQKMM 240

Query: 521 NWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551
            WM P++++F+  + P  +++YW  +N+ +++
Sbjct: 241 LWMFPIMYIFSGVAMPFAVLVYWLTNNICNLL 272


>gi|115433064|ref|XP_001216669.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114189521|gb|EAU31221.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 504

 Score = 93.9 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 89/243 (36%), Gaps = 38/243 (15%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390
             +   + +  +  +  ++ +F+   G    A I+   + V+L           ++  + 
Sbjct: 118 KALGLDYGWGPSSLIEYVIEHFHIWGGLPWWASIVGAGLLVRLALLKPMLGAADTSTKIN 177

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAI 443
           N++     LR K   +  +  Q  M+Q       L+  H + P       LLQ+P+ F  
Sbjct: 178 NLRDVSTPLRTKMTTAAREGKQTEMMQARMELNNLHAQHGVKPWKSFV-PLLQVPLGFGC 236

Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           Y+V+     +          GWIKDL  ADP                     + P   +L
Sbjct: 237 YRVVKGMTALPVPGLALESVGWIKDLTVADPYF-------------------VLPATTAL 277

Query: 500 SMFIQMK------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            M++  +      ++         M L  MP +    +S FP+ L +Y+  +   ++ Q 
Sbjct: 278 FMYLSFRKGGESGINNLTNSSLGKMFLYGMPAMTFAFMSFFPSALQLYFVATGAFALGQS 337

Query: 554 AVI 556
            ++
Sbjct: 338 YLL 340


>gi|328466765|gb|EGF37883.1| OxaA-like protein precursor [Listeria monocytogenes 1816]
          Length = 275

 Score = 93.9 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 39/253 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393
            Y I      +M     + GN+GIAI++TT+ ++ L  PL  +   +   M++       
Sbjct: 36  TYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95

Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449
                   L+    +     +QK M+ +Y  +NINP+  GC P+L+Q+P+  A Y  I  
Sbjct: 96  EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S E+  +  + W  +L + D                      +  II  L    Q  +S 
Sbjct: 156 SSEIA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192

Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-- 563
                 Q   +  +    P++ +F   + P+ L +YW+   +    Q  +  K++  +  
Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHP 252

Query: 564 -IGLIDRLRSTFS 575
            I ++++    F 
Sbjct: 253 EIKVMEQEEKEFE 265


>gi|308234064|ref|ZP_07664801.1| membrane protein insertase, YidC/Oxa1 family [Atopobium vaginae DSM
           15829]
 gi|328943461|ref|ZP_08240926.1| inner membrane protein OxaA [Atopobium vaginae DSM 15829]
 gi|327491430|gb|EGF23204.1| inner membrane protein OxaA [Atopobium vaginae DSM 15829]
          Length = 252

 Score = 93.9 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 119/248 (47%), Gaps = 19/248 (7%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            + +    +  ++    +L G++G+A+++ T+ +++L  PL  K   S+A M+ +QPK+ 
Sbjct: 1   MWDWFIGILTQILELLQSLCGDWGLAVIILTLIIRVLLIPLMTKSTESSAQMQVLQPKMQ 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           E+++K+   P   + + M + Y  H  N L GC P LLQ+P+FF ++ V S   +   A 
Sbjct: 61  EIKDKYADDPA-RMNEEMQKFYSEHKFNMLGGCLPTLLQMPIFFGLFTVASKIPQ--DAS 117

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
           F+  +  ++ + P  +F   G+      G     +  I   +  FI M ++   +   Q 
Sbjct: 118 FFNILPSISLS-PQTVFEQQGL-----SGAAIYILLVITFGVMTFIPMVITSSASSSQQR 171

Query: 518 M----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
                +   M V  ++   + P  +++Y++ S+V  I+QQ ++         ++ R++  
Sbjct: 172 SQTITMGAVMSVFMLWFGWTVPTAVLLYYNTSSVWQIIQQKLVT------DRVMARVKKE 225

Query: 574 FSKNYNSQ 581
             +   +Q
Sbjct: 226 TEEKMKNQ 233


>gi|168484274|ref|ZP_02709226.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1873-00]
 gi|169833583|ref|YP_001695329.1| OxaA-like protein precursor [Streptococcus pneumoniae Hungary19A-6]
 gi|194397013|ref|YP_002038558.1| OxaA-like protein precursor [Streptococcus pneumoniae G54]
 gi|168996085|gb|ACA36697.1| membrane protein OxaA 2 [Streptococcus pneumoniae Hungary19A-6]
 gi|172042503|gb|EDT50549.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1873-00]
 gi|194356680|gb|ACF55128.1| SpoIIIJ family protein [Streptococcus pneumoniae G54]
 gi|332199401|gb|EGJ13478.1| 60Kd inner membrane family protein [Streptococcus pneumoniae
           GA47368]
          Length = 308

 Score = 93.9 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 76/209 (36%), Gaps = 24/209 (11%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +LLQ+P F AIY     +  +  A + G                   +P   P  + V  
Sbjct: 143 LLLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551
             ++  L   + +        + Q   + +M P++ V      PA + +YW     + I+
Sbjct: 184 AGVLYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243

Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           QQ ++   +     L  ++R   +KN   
Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPPK 270


>gi|15241690|ref|NP_201011.1| OXA1; P-P-bond-hydrolysis-driven protein transmembrane transporter
           [Arabidopsis thaliana]
 gi|38372434|sp|Q42191|OXA1_ARATH RecName: Full=Mitochondrial inner membrane protein OXA1; AltName:
           Full=Oxidase assembly 1 protein; Short=AtOXA1; Flags:
           Precursor
 gi|2462077|emb|CAA72619.1| Oxa1 protein [Arabidopsis thaliana]
 gi|6624207|dbj|BAA88473.1| AtOXA1 [Arabidopsis thaliana]
 gi|10176922|dbj|BAB10166.1| Oxa1 protein [Arabidopsis thaliana]
 gi|21618094|gb|AAM67144.1| AtOXA1 [Arabidopsis thaliana]
 gi|22655115|gb|AAM98148.1| AtOXA1 [Arabidopsis thaliana]
 gi|30387505|gb|AAP31918.1| At5g62050 [Arabidopsis thaliana]
 gi|332010172|gb|AED97555.1| mitochondrial inner membrane protein OXA1 [Arabidopsis thaliana]
          Length = 429

 Score = 93.9 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 94/291 (32%), Gaps = 34/291 (11%)

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
           +         G          A      T+       A    E+ +     +F    +  
Sbjct: 80  YRYMSSAPGVGSEKIGVMSDIAEVITDSTLQDVPAQAAAAVSEVTLAAADSFFPIAALQQ 139

Query: 349 LMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE----KF 403
            +   +      +  +I++ T+ ++    PL  KQ   T  +  ++P+++ +RE    K 
Sbjct: 140 CIDMVHTFTGFEWWASIVVATILIRSSTVPLLIKQMKDTTKLALMRPRLESIREEMQNKG 199

Query: 404 KQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE---MRHAPFW 459
             S      +  ++ L+K + + P      + +Q P+F   +  I    E          
Sbjct: 200 MDSVTMAEGQKKMKNLFKEYGVTPFTPMKGMFIQGPLFICFFLAIRNMAEKVPSFQTGGA 259

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP------PAD 513
            W  DL   D                      I P+I  L+  I ++ +        P  
Sbjct: 260 LWFTDLTTPDSLY-------------------ILPVITGLTFLITVECNAQEGMEGNPMA 300

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
                +     ++ V    SFP  +  YW  SN+ S++   VI +    ++
Sbjct: 301 GTVKTVCRVFALLTVPMTMSFPQAIFCYWITSNLFSLMYGLVIKRPQVKKM 351


>gi|289167183|ref|YP_003445450.1| oxaA2 [Streptococcus mitis B6]
 gi|288906748|emb|CBJ21582.1| oxaA2 [Streptococcus mitis B6]
          Length = 308

 Score = 93.9 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 76/209 (36%), Gaps = 24/209 (11%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGIGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +LLQ+P F AIY     +  +  A + G                   +P   P  + V  
Sbjct: 143 VLLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAF 183

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551
             I+  L   + +        + Q   + +M P++ V      PA + +YW     + I+
Sbjct: 184 AGILYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243

Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           QQ ++   +     L  ++R   +KN   
Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPPK 270


>gi|327184010|gb|AEA32457.1| hypothetical protein LAB52_07690 [Lactobacillus amylovorus GRL
           1118]
          Length = 322

 Score = 93.9 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 100/258 (38%), Gaps = 43/258 (16%)

Query: 339 FYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           + ++ +P+  +M    +++      G  I++ T  V+L+  PL   Q   +   +    +
Sbjct: 43  YQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQEKMAR 102

Query: 396 IDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCWPILLQIPVFFAIY 444
           +          ++ K      Q+       +LY  + ++     GC P+++Q+P+ + IY
Sbjct: 103 LQPQMKLIQTAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGMGCLPLIIQLPIMWGIY 162

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           + +  S ++ H+ F+G    L+                         +  I+ ++   IQ
Sbjct: 163 QAVFYSPQLAHSTFFG--ISLSQK---------------------SVVLAIVATVFTVIQ 199

Query: 505 MKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
             +S     + Q   +  M    P++ +F   SF   L +YW+  N++ I+QQ ++    
Sbjct: 200 GYISLIGIPEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIIQQLIVT--F 257

Query: 561 GAEIGLIDRLRSTFSKNY 578
                +   +     +  
Sbjct: 258 VLTPKVKQHVAEELKEKP 275


>gi|330684781|gb|EGG96474.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus
           epidermidis VCU121]
          Length = 289

 Score = 93.9 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 100/252 (39%), Gaps = 35/252 (13%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394
           ++     PM  L+ +  N  L  ++G+AI++    ++L+  P     Y ++  M+     
Sbjct: 32  FYNTFVDPMKHLLQWLGNDVLHNDYGLAIIILVFVIRLVLLPFMLSNYKNSHMMREKMKV 91

Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + ++++YK +++NP+    GC P+L+Q+P+   +Y
Sbjct: 92  AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIMGLY 151

Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   L   +   P + W  +L   D                      I  ++  +  +
Sbjct: 152 FVLKDKLVSGLSVHPHFLWF-NLTKPD-----------------IWITIIAGVLYFIQAY 193

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG- 561
           +  K  P    +   M++   P++ ++   S  + L +YWS S    +VQ       +  
Sbjct: 194 VSSKTMPQEQRQMGYMMMIVSPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANMYYSK 253

Query: 562 -AEIGLIDRLRS 572
            A+  +   L  
Sbjct: 254 LAKKEVEPLLEK 265


>gi|16803419|ref|NP_464904.1| OxaA-like protein precursor [Listeria monocytogenes EGD-e]
 gi|46907607|ref|YP_013996.1| OxaA-like protein precursor [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47094519|ref|ZP_00232187.1| SpoJ family protein [Listeria monocytogenes str. 4b H7858]
 gi|47095963|ref|ZP_00233566.1| SpoJ family protein [Listeria monocytogenes str. 1/2a F6854]
 gi|224499955|ref|ZP_03668304.1| OxaA-like protein precursor [Listeria monocytogenes Finland 1988]
 gi|224501677|ref|ZP_03669984.1| OxaA-like protein precursor [Listeria monocytogenes FSL R2-561]
 gi|226223980|ref|YP_002758087.1| SpoIIIJ protein [Listeria monocytogenes Clip81459]
 gi|254824561|ref|ZP_05229562.1| OxaA-like protein [Listeria monocytogenes FSL J1-194]
 gi|254827640|ref|ZP_05232327.1| OxaA-like protein [Listeria monocytogenes FSL N3-165]
 gi|254829862|ref|ZP_05234517.1| OxaA-like protein precursor [Listeria monocytogenes 10403S]
 gi|254852573|ref|ZP_05241921.1| OxaA-like protein [Listeria monocytogenes FSL R2-503]
 gi|254898455|ref|ZP_05258379.1| OxaA-like protein precursor [Listeria monocytogenes J0161]
 gi|254912054|ref|ZP_05262066.1| SpoJ family protein [Listeria monocytogenes J2818]
 gi|254932564|ref|ZP_05265923.1| OxaA-like protein [Listeria monocytogenes HPB2262]
 gi|254936381|ref|ZP_05268078.1| OxaA-like protein [Listeria monocytogenes F6900]
 gi|255521766|ref|ZP_05389003.1| OxaA-like protein precursor [Listeria monocytogenes FSL J1-175]
 gi|284801765|ref|YP_003413630.1| OxaA-like protein precursor [Listeria monocytogenes 08-5578]
 gi|284994907|ref|YP_003416675.1| OxaA-like protein precursor [Listeria monocytogenes 08-5923]
 gi|300766399|ref|ZP_07076356.1| SpoJ family protein [Listeria monocytogenes FSL N1-017]
 gi|38503111|sp|Q8Y7A9|OXAA2_LISMO RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|67461028|sp|Q71ZU1|OXAA2_LISMF RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|16410795|emb|CAC99457.1| lmo1379 [Listeria monocytogenes EGD-e]
 gi|46880875|gb|AAT04173.1| SpoJ family protein [Listeria monocytogenes serotype 4b str. F2365]
 gi|47015709|gb|EAL06639.1| SpoJ family protein [Listeria monocytogenes str. 1/2a F6854]
 gi|47017102|gb|EAL07967.1| SpoJ family protein [Listeria monocytogenes str. 4b H7858]
 gi|225876442|emb|CAS05151.1| Putative SpoIIIJ protein [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258600019|gb|EEW13344.1| OxaA-like protein [Listeria monocytogenes FSL N3-165]
 gi|258605886|gb|EEW18494.1| OxaA-like protein [Listeria monocytogenes FSL R2-503]
 gi|258608972|gb|EEW21580.1| OxaA-like protein [Listeria monocytogenes F6900]
 gi|284057327|gb|ADB68268.1| OxaA-like protein precursor [Listeria monocytogenes 08-5578]
 gi|284060374|gb|ADB71313.1| OxaA-like protein precursor [Listeria monocytogenes 08-5923]
 gi|293584123|gb|EFF96155.1| OxaA-like protein [Listeria monocytogenes HPB2262]
 gi|293590021|gb|EFF98355.1| SpoJ family protein [Listeria monocytogenes J2818]
 gi|293593800|gb|EFG01561.1| OxaA-like protein [Listeria monocytogenes FSL J1-194]
 gi|300512903|gb|EFK39993.1| SpoJ family protein [Listeria monocytogenes FSL N1-017]
 gi|332311821|gb|EGJ24916.1| Membrane protein oxaA 2 [Listeria monocytogenes str. Scott A]
          Length = 275

 Score = 93.5 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 39/253 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393
            Y I      +M     + GN+GIAI++TT+ ++ L  PL  +   +   M++       
Sbjct: 36  TYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95

Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449
                   L+    +     +QK M+ +Y  +NINP+  GC P+L+Q+P+  A Y  I  
Sbjct: 96  EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S E+  +  + W  +L + D                      +  II  L    Q  +S 
Sbjct: 156 SSEIA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192

Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-- 563
                 Q   +  +    P++ +F   + P+ L +YW+   +    Q  +  K++  +  
Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHP 252

Query: 564 -IGLIDRLRSTFS 575
            I ++++    F 
Sbjct: 253 EIKVMEQEEKEFE 265


>gi|16800484|ref|NP_470752.1| OxaA-like protein precursor [Listeria innocua Clip11262]
 gi|38503124|sp|Q92BX6|OXAA2_LISIN RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|16413889|emb|CAC96647.1| lin1416 [Listeria innocua Clip11262]
          Length = 275

 Score = 93.5 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 39/253 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393
            Y I      +M     + GN+GIAI++TT+ ++ L  PL  +   +   M++       
Sbjct: 36  TYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95

Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449
                   L+    +     +QK M+ +Y  +NINP+  GC P+L+Q+P+  A Y  I  
Sbjct: 96  EIDEIQARLKRATSKEEQANIQKEMMAVYSKYNINPIQMGCLPLLIQMPILMAFYYAIRG 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S E+  +  + W  +L + D                      +  II  L    Q  +S 
Sbjct: 156 SSEIA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192

Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-- 563
                 Q   +  +    P++ +F   + P+ L +YW+   +    Q  +  K++  +  
Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHP 252

Query: 564 -IGLIDRLRSTFS 575
            I ++++    F 
Sbjct: 253 EIKVMEQEEKEFE 265


>gi|153956073|ref|YP_001396838.1| hypothetical protein CKL_3476 [Clostridium kluyveri DSM 555]
 gi|219856408|ref|YP_002473530.1| hypothetical protein CKR_3065 [Clostridium kluyveri NBRC 12016]
 gi|146348931|gb|EDK35467.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219570132|dbj|BAH08116.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 297

 Score = 93.5 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 71/295 (24%), Positives = 119/295 (40%), Gaps = 59/295 (20%)

Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
              FIA P+  L+ + Y  +   N+G+AI+  TV +K L  PL  KQY + + + NIQ K
Sbjct: 1   MIDFIAFPIGHLLKFIYEHIAFNNYGVAIIELTVIIKTLLLPLYIKQYHAASGISNIQYK 60

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV--------- 446
           + E+++K K +  + L + +++LYK +N+NP +GC P+L Q+P+ F++Y V         
Sbjct: 61  VQEIQKKHKNNKEK-LNQEIMKLYKENNVNPASGCLPLLFQMPILFSLYYVVSQPLKYMT 119

Query: 447 ------ISISLEM--RHAPFWGWIKDLA-------------------AADPTNIFTLFGI 479
                 I    EM  + +     + DL+                     D        G+
Sbjct: 120 GKSPAAIQQLFEMIPQGSDRITNMHDLSIINYFSKHLDKLSDVKGMLEKDDLLNMNFLGM 179

Query: 480 LPFYLPGFMHVGIWP---------IIMSLSMFIQMKMSPPPA----------DKGQAMIL 520
               +P      I           ++ + + +I  K S              D  Q  + 
Sbjct: 180 NLGSVPNLHFNHIDTNNLLILLIPLLAAATTYISTKYSTNQTVSQTSDKQIADSMQGNMN 239

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
               VV  F   + PAG+ IYW   N+  I QQ  + K    +  L +  +    
Sbjct: 240 LIASVVTGFMAFTLPAGMGIYWITGNIYQIFQQMFMNK-FVIKKSLNNNKKGKKR 293


>gi|312865633|ref|ZP_07725857.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei
           F0415]
 gi|311098754|gb|EFQ56974.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei
           F0415]
          Length = 266

 Score = 93.5 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 98/228 (42%), Gaps = 27/228 (11%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411
            + +  G+ GI I+L T+ V+L   PL  +Q  S+  M+ +QP++  +++++      + 
Sbjct: 45  QWLSFGGSVGIGIILITLIVRLALVPLYNRQMKSSREMQELQPELKRIQKEYADDRN-LQ 103

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
                +LYK + +N  A   PIL+Q+PV  A+Y+ +     +    F  W  +L   D T
Sbjct: 104 YAKTQELYKENGVNQWAAFLPILIQLPVMMALYQALIRVPALSQGNFLIW--NLGKNDGT 161

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN---WMPVVFV 528
                               I PI+ +   F+ M +S     +  A +      MP+   
Sbjct: 162 F-------------------ILPILAAFFTFLSMWLSNKATKEKNAFMTATSIIMPLFIF 202

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
           +  + F +G+ +YW+  N   + Q  V++  +  +I      +    K
Sbjct: 203 WIGTRFTSGIALYWAIGNAFQVAQ--VLIFHNPFKIIAERERKEALEK 248


>gi|282850778|ref|ZP_06260153.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus gasseri
           224-1]
 gi|282558186|gb|EFB63773.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus gasseri
           224-1]
          Length = 166

 Score = 93.5 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 18/156 (11%)

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
           LYK   INP  GC P+L+Q+PV +A+Y+ I  + ++     + W+ DL   DP  I    
Sbjct: 1   LYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTPQL-QNGRFLWM-DLGRPDPYYIM--- 55

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPA 536
              P     F  +         S +I    +P  +  G    + + MP++   +     +
Sbjct: 56  ---PVLAAAFTFI---------STYISQMSTPQSSQNGMTKGMTYLMPLIIGVSAIGIQS 103

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
            + +YW  SN+  +VQ  ++      +  L ++ ++
Sbjct: 104 AISLYWVISNLFQVVQTFILQNPFKYQRELEEQKKA 139


>gi|229822836|ref|ZP_04448906.1| hypothetical protein GCWU000282_00125 [Catonella morbi ATCC 51271]
 gi|229787649|gb|EEP23763.1| hypothetical protein GCWU000282_00125 [Catonella morbi ATCC 51271]
          Length = 323

 Score = 93.5 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 94/254 (37%), Gaps = 39/254 (15%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ------ 393
           Y        L      L  ++G+AI++ T+  ++   P + K    T   +         
Sbjct: 44  YLGKPAAAFLDFLAGFLFNSYGLAIIIVTLLTRVFMLPSSLKMTRDTMISQARMKVAQPE 103

Query: 394 --PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL---AGCWPILLQIPVFFAIYKVIS 448
                +E+      +    LQ+ ++ +YK +NIN L   +GC P+LLQ+PV  A+Y  I 
Sbjct: 104 INEIQEEINASKDPAERARLQQELMGVYKKYNINMLGGLSGCLPLLLQMPVISAVYAAIR 163

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM-FIQMKM 507
            S                    + I     +          + I  + +S+   ++  K 
Sbjct: 164 TS--------------------SAIQNSTFLGIQLGQRSTLIVILVVAVSILQSWLMQKQ 203

Query: 508 SPPPADKGQA----MILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            P      +A     ++ WM P++F +   +  AGL +Y+    V  I QQ      H  
Sbjct: 204 MPSTPGNEKAGQTSQVMFWMNPILFGWMTWTTDAGLGLYFLAGAVFMIGQQLYTN--HVV 261

Query: 563 EIGLIDRLRSTFSK 576
           +  + + +    + 
Sbjct: 262 KPKIQEIIDQDMAN 275


>gi|118472161|ref|YP_891135.1| inner membrane protein translocase component YidC [Mycobacterium
           smegmatis str. MC2 155]
 gi|118173448|gb|ABK74344.1| membrane protein OxaA [Mycobacterium smegmatis str. MC2 155]
          Length = 367

 Score = 93.5 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 94/270 (34%), Gaps = 39/270 (14%)

Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384
                 +++                          + +++M     ++ + +    KQ  
Sbjct: 2   FNFFSLDIIYYPVSAIMWVWYKAFSFLLGPTNFFAWALSVMFLVFTLRAILYKPFVKQIR 61

Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
           +T  M+ +QP+I  L++K+     Q +   M +L K H  NP+ GC P+L Q+PVF  +Y
Sbjct: 62  TTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQKEHGFNPILGCLPMLAQVPVFLGLY 120

Query: 445 KVISI-------------SLE--------MRHAPFWGWIKD---LAAADPTNIFTLFGIL 480
            V+               S+E        +  A       D     A     +    G+ 
Sbjct: 121 HVLMSFNRTQTGIGRLGLSVEENRSLGNYVFSATDVQHFLDANLFGAPLGATMIQQHGLE 180

Query: 481 PFYLPGFMHVGI----WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVV 526
            F     + V I      I+  ++     + S         A+   AM+    L   P+ 
Sbjct: 181 AFTEFNRLAVIIVGVPIMILAGIATHFNSRASVARQSVEAAANPQTAMMNKLALYVFPLG 240

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            V      P  +I+YW  +N+ +  QQ  +
Sbjct: 241 VVVGGPFLPLAVIMYWLANNIWTYGQQHYV 270


>gi|229816993|ref|ZP_04447275.1| hypothetical protein BIFANG_02248 [Bifidobacterium angulatum DSM
           20098]
 gi|229785738|gb|EEP21852.1| hypothetical protein BIFANG_02248 [Bifidobacterium angulatum DSM
           20098]
          Length = 347

 Score = 93.5 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 109/274 (39%), Gaps = 33/274 (12%)

Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML-MSYFYNLVGNFGIAIMLTTV 369
              +   +        + +    ++W     +A     L M     +  ++ ++I+   +
Sbjct: 1   MGNQDQFLLDSGFWGWLYKLLYPVEWLMTQIMAVFHKFLVMLGMNEIGFSWVLSIVFLVI 60

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQP--------KIDELREKFKQSPPQVLQKAMIQLYKT 421
            V++  FPL  K       M+              ++ + K   +  + +Q+  ++LY+ 
Sbjct: 61  VVQICVFPLFYKSIKGMRKMQADMQVLQPKLKRIQNKYKGKNDPASKEAMQRETMKLYQD 120

Query: 422 HNINPLAGC---WPILLQIPVFFAIYKVISISLEM-RHA---PFWGWIKDLAAADPTNIF 474
              NP+ GC    P+ +Q PVF  ++  +S    + R            D+A A      
Sbjct: 121 TGTNPMGGCTSMLPMFVQGPVFMCMFYTLSAIPYIARGKFRDGQGLGAFDIATAKEFTST 180

Query: 475 TLFGILPFY------LPGFMHVGIWPIIMSLSMFIQM----KMSPPPADK-------GQA 517
           T+FG+          + G + +GI+  +M   +++      K + P  +         Q 
Sbjct: 181 TVFGVNVADNFTTATVSGKIVIGIFVALMCFCLWLMQFNSMKRNMPQNNAQNKQAEMMQK 240

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           M+L   P++++F+  + P  +++YW  +NV +++
Sbjct: 241 MMLWVFPIMYIFSGIAMPFAVLVYWLTNNVCNLL 274


>gi|212535248|ref|XP_002147780.1| mitochondrial export translocase Oxa1, putative [Penicillium
           marneffei ATCC 18224]
 gi|210070179|gb|EEA24269.1| mitochondrial export translocase Oxa1, putative [Penicillium
           marneffei ATCC 18224]
          Length = 518

 Score = 93.1 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/316 (16%), Positives = 108/316 (34%), Gaps = 38/316 (12%)

Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319
           +    P   TS + + +  S  +    +  S +        + +              + 
Sbjct: 51  SIASRPILSTSQNCRLRLKSSSYLPPVSVSSLSFARFNSTSTESAQATGDVTPLGESQLP 110

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPL 378
             +       +   +   + +  +  M  L+ + +      +  +I +  +  +L  F  
Sbjct: 111 SIDDIPEKIGYLKDLGLDYGWGPSAFMEWLIEHIHIWGGMPWYASIAVAAIVTRLALFHP 170

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCW 431
           A K   + A    I+ ++ ELR+K  Q   Q         +  +  LY  H+I       
Sbjct: 171 ALKAADNAAKTSPIKDEMMELRKKRMQLLSQGRQLDAAKAKVELDDLYAKHDIKMWRNFV 230

Query: 432 PILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487
             LLQIP+ F I++V+     +         + WI DL + DP                 
Sbjct: 231 -PLLQIPLGFGIFRVVRGMTTLPIPGLVVEEFAWIHDLTSYDPYY--------------- 274

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAM------ILNWMPVVFVFALSSFPAGLIIY 541
               + PI+ S  M++ M+                  I   +P + +  ++  PA L +Y
Sbjct: 275 ----VLPILTSGFMYLAMRKGMDSGVNEMGKTALGRSITIGLPAMSLLFIAWQPAALQLY 330

Query: 542 WSWSNVISIVQQAVIM 557
           ++ S++ S+ Q  +  
Sbjct: 331 FAVSSLFSLGQGYLFN 346


>gi|239637384|ref|ZP_04678366.1| putative membrane protein [Staphylococcus warneri L37603]
 gi|239596984|gb|EEQ79499.1| putative membrane protein [Staphylococcus warneri L37603]
          Length = 289

 Score = 93.1 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 100/252 (39%), Gaps = 35/252 (13%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394
           ++     PM  L+ +  N  L  ++G+AI++    ++L+  P     Y ++  M+     
Sbjct: 32  FYNTFVDPMKHLLQWLGNDVLHNDYGLAIIILVFVIRLVLLPFMLSNYKNSHMMREKMKV 91

Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + ++++YK +++NP+    GC P+L+Q+P+   +Y
Sbjct: 92  AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIMGLY 151

Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   L   +   P + W  +L   D                      I  ++  +  +
Sbjct: 152 FVLKDKLVNGLSVHPHFLWF-NLTKPD-----------------IWITIIAGVLYFIQAY 193

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG- 561
           +  K  P    +   M++   P++ ++   S  + L +YWS S    +VQ       +  
Sbjct: 194 VSSKTMPQEQRQMGYMMMIVSPIMIIWIALSSASALGLYWSVSAAFLVVQTHFANMYYSK 253

Query: 562 -AEIGLIDRLRS 572
            A+  +   L  
Sbjct: 254 LAKKEVEPLLEK 265


>gi|77409832|ref|ZP_00786473.1| SpoIIIJ family protein [Streptococcus agalactiae COH1]
 gi|77171560|gb|EAO74788.1| SpoIIIJ family protein [Streptococcus agalactiae COH1]
          Length = 195

 Score = 93.1 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 82/181 (45%), Gaps = 27/181 (14%)

Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
             S+  M+ IQP++ EL++K+    P     L   M  +YK   +NP A   P+L+Q+PV
Sbjct: 1   MKSSQKMQEIQPRLKELQKKYPGKDPDSRLKLNDEMQSMYKAEGVNPYASVLPLLIQLPV 60

Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
            +A+++ ++    ++   F     +L+  DP                     I P++ +L
Sbjct: 61  LWALFQALTRVXFLKVGTFLS--LELSQPDPYY-------------------ILPVLAAL 99

Query: 500 SMFIQMKMSPPPADKGQ---AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             F+   ++   A +      ++   MP + +    +F +G+++YW+ SN   + Q  ++
Sbjct: 100 FTFLSTWLTNKAAVEKNIALTLMTYVMPFIILVTSFNFASGVVLYWTVSNAFQVFQILLL 159

Query: 557 M 557
            
Sbjct: 160 N 160


>gi|78369430|ref|NP_001030412.1| mitochondrial inner membrane protein OXA1L precursor [Bos taurus]
 gi|122064647|sp|Q3SYV3|OXA1L_BOVIN RecName: Full=Mitochondrial inner membrane protein OXA1L; AltName:
           Full=Oxidase assembly 1-like protein; Short=OXA1-like
           protein; Flags: Precursor
 gi|74268195|gb|AAI03368.1| Oxidase (cytochrome c) assembly 1-like [Bos taurus]
 gi|296483636|gb|DAA25751.1| mitochondrial inner membrane protein OXA1L precursor [Bos taurus]
          Length = 441

 Score = 93.1 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 83/231 (35%), Gaps = 36/231 (15%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ + + NL   +  AI   TV  + L FPL  K     A + N  P+I 
Sbjct: 118 SYTPVGLIQNLLEFMHVNLGLPWWGAIAACTVLARCLVFPLIVKGQREAAKIHNHLPEIQ 177

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++          +         K H+I         L Q P+F + +  +   
Sbjct: 178 KFSARIREAKLTGNHTEFYRASSEMTFYQKKHDIKLFRPLILPLTQAPIFISFFIALREM 237

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF---- 502
             +           W +DL  +DP                   + + P++++ +M+    
Sbjct: 238 ANLPVPSLQTGGLWWFQDLTLSDP-------------------IYVLPLVVTATMWGVLE 278

Query: 503 IQMKMSPPPAD-KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +  +     +D +     +  MP+  +     FP  + +YW  SN+ S+ Q
Sbjct: 279 LGAETGMQSSDLQWMRNFIRLMPLAVLPITIHFPTAVFMYWLSSNMFSLGQ 329


>gi|328474988|gb|EGF45780.1| OxaA-like protein precursor [Listeria monocytogenes 220]
          Length = 273

 Score = 93.1 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 39/253 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393
            Y I      +M     + GN+GIAI++TT+ ++ L  PL  +   +   M++       
Sbjct: 36  TYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95

Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449
                   L+    +     +QK M+ +Y  +NINP+  GC P+L+Q+P+  A Y  I  
Sbjct: 96  EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S E+  +  + W  +L + D                      +  II  L    Q  +S 
Sbjct: 156 SSEIA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192

Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-- 563
                 Q   +  +    P++ +F   + P+ L +YW+   +    Q  +  K++  +  
Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHP 252

Query: 564 -IGLIDRLRSTFS 575
            I ++++    F 
Sbjct: 253 EIKVMEQEEKEFE 265


>gi|327440675|dbj|BAK17040.1| preprotein translocase subunit YidC [Solibacillus silvestris
           StLB046]
          Length = 253

 Score = 93.1 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 55/260 (21%), Positives = 92/260 (35%), Gaps = 30/260 (11%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +   E       F          +       L +  Y L     I I+   +   +L  
Sbjct: 16  LLAGCESVENKEGFFYSTFVRPMDWTLNTFGELFNGSYGLAIIAIILIIRLVLMPFMLKT 75

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL--QKAMIQLYKTHNINPL-AGCWPI 433
             ++       +    Q +  + R K  ++P + +  Q+ M+ LYK HNINPL  GC P 
Sbjct: 76  YRSQATMKVKMDFVRPQMEDIQTRLKAAKTPEERMTVQQEMMSLYKEHNINPLNMGCLPA 135

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+P+   +Y  I  S E++    + W  DL + D                        
Sbjct: 136 LIQMPIIMGLYYAILYSAEIKTHS-FLWF-DLGSTDIW---------------------M 172

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVIS 549
             I  +  F+Q K+S     + Q   +  M    P++ V    S  A L +YW+   +  
Sbjct: 173 TAIAGVVYFVQAKVSLQTVPEAQKNQMKLMIYVSPIMIVIISLSSMAALPLYWAVGGLFL 232

Query: 550 IVQQAVIMKMHGAEIGLIDR 569
           IVQ  +  K   +       
Sbjct: 233 IVQTYIGRKFFSSIPETKGN 252


>gi|304439080|ref|ZP_07398999.1| membrane protein OxaA [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372439|gb|EFM26026.1| membrane protein OxaA [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 238

 Score = 93.1 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 24/201 (11%)

Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431
           ++L  P+   Q  +   M  +QP++++++ K+K   PQ L     QLYK  N N L+GC 
Sbjct: 44  RVLMLPIGISQMRNQKKMAELQPELEKIQTKYKN-DPQTLAAKQRQLYKDANYNMLSGCL 102

Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491
           P+++Q+ V    Y+V          P     K+    D  +I   F  +   +       
Sbjct: 103 PMIVQMMVLIGFYRVFY-------EPATYVFKEPGLYD--SIAKNFFYIK-DIDLKDTTL 152

Query: 492 IWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541
           I PI+ +++ F+   ++             +      +   MPV+      +F + L++Y
Sbjct: 153 ILPIVAAVTTFLSSWITQNSTANKASQTAQSQSMMNTMTLVMPVMIFMMGRNFASALVLY 212

Query: 542 WSWSNVISIVQQAV---IMKM 559
           W+ SN+  ++QQ +   I+K 
Sbjct: 213 WTVSNLFQVLQQLIQNVIIKR 233


>gi|295425290|ref|ZP_06817993.1| membrane protein chaperone OxaA [Lactobacillus amylolyticus DSM
           11664]
 gi|295065066|gb|EFG55971.1| membrane protein chaperone OxaA [Lactobacillus amylolyticus DSM
           11664]
          Length = 321

 Score = 93.1 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 98/272 (36%), Gaps = 34/272 (12%)

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFP 377
                  IP    +  W + +       +++     +      G AI++ T+ V+ +  P
Sbjct: 27  GGNPQKGIPPHGGIYGWVYTWIGIPLQNVMLKTANAIKGANGAGWAIVIITLVVRTILLP 86

Query: 378 LAKKQYVSTANMKNIQPKIDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL- 427
           L   Q   +   +    ++          ++ K      Q+       +LY+ +N++   
Sbjct: 87  LMLVQQKKSVTQQEKMARLQPQMKLIQEGMKHKPMTPEQQMQLSKWQRELYQKNNVSLTG 146

Query: 428 -AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486
             GC P+L+Q+P+   IY  ++ S  +R A F+G                   +      
Sbjct: 147 GIGCLPLLIQMPIMMGIYSAVAYSSVLREASFFG-------------------ISLNSKS 187

Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546
            +   I  +   +  +I +   P    K    ++   P++ +F   SF   L +YW+  N
Sbjct: 188 LVLAIIATVFAVIQGYISLIGIPKEQKKTMQSMMFMNPIMTLFFSLSFSGALALYWAAGN 247

Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
            ++I+QQ ++            R+ +    + 
Sbjct: 248 FVTIIQQILVT--FVITPREKKRVAAEIKDHP 277


>gi|310800716|gb|EFQ35609.1| YidC/Oxa1 family membrane protein insertase [Glomerella graminicola
           M1.001]
          Length = 476

 Score = 93.1 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 91/247 (36%), Gaps = 38/247 (15%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTA 387
            F   +   + +  +  M     + +   G      I  T + ++L+ F        ++A
Sbjct: 141 GFLKTLGLDFGWGPSSVMQWAFEHIHVYSGLPWWGSIAATGILLRLVMFKPLLMAQETSA 200

Query: 388 NMKNIQP---------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438
            M+ +Q           + E   +   +    +++ +  + K   +NPL G    LLQIP
Sbjct: 201 RMQKLQQNPKYEEVRKGVQEAMSRGDTAAMTEMRRDLSVMNKNAGVNPLKG-LWGLLQIP 259

Query: 439 VFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
             + +++V++ +  +         + W+ DL  +DP                     + P
Sbjct: 260 FGYGMFRVLNGAAAIPVPGMETGGFLWVSDLTVSDPLF-------------------LLP 300

Query: 495 IIMSLSMFIQMKMSP---PPADKGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           I   L+MF  +K+      P  K Q   ++  +  + V   +  PAG+  Y+  +  + +
Sbjct: 301 IAGPLAMFAMVKLGSRYATPQAKAQQKLMMYILGPISVIFTAYLPAGVQWYFFVAGAVGV 360

Query: 551 VQQAVIM 557
            Q  +  
Sbjct: 361 FQNWLFN 367


>gi|238917977|ref|YP_002931494.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC
           27750]
 gi|238873337|gb|ACR73047.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC
           27750]
          Length = 423

 Score = 93.1 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 55/293 (18%), Positives = 102/293 (34%), Gaps = 79/293 (26%)

Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP-----PQVLQKAMIQLYKT 421
            T+ VK+L  PL  KQ   T     + P+I  ++EK+K         Q +Q     +Y+ 
Sbjct: 48  FTLLVKMLMLPLQIKQQKMTKLQSVMNPEIKAIQEKYKGKNSDTVAMQKMQAETKAVYEK 107

Query: 422 HNINPLAGCWPILLQI-------------PVFFAIYKVISISL----------------- 451
           + ++    C  +L+Q+             P++ +  KV+ +++                 
Sbjct: 108 YGVSQWGSCVQLLIQMPILFALYRVFQQIPLYISQIKVLFLNILGVNGVDGISSVSGYAD 167

Query: 452 ---EMRHAPF--------------------------WGWIKDLAAA--DPTNIFTLFGIL 480
              E+                               +    D+     D  N    F  +
Sbjct: 168 TLNEIYGKTVDWSNTSTAVTTLNSFTADQWTKLKEAFPAFSDMITQNLDKINHMNTFLGV 227

Query: 481 PFY--LPGFMHVGIW-PIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFV 528
                    +H+ I  PI+  ++ FI +K+S           PA     M+  +MP++  
Sbjct: 228 NMSQNPGFGLHIAILIPILAGVTQFISVKVSQAGMEQPDSDNPAAASMKMMTYFMPIMSA 287

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           F   S P+GL +YW  + VI  +Q   I + +  +IG    +     K    +
Sbjct: 288 FLAISLPSGLGVYWIATAVIQTIQTIFINRYYD-KIGTDKIVEKNVEKRNKKR 339


>gi|297797165|ref|XP_002866467.1| hypothetical protein ARALYDRAFT_496379 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312302|gb|EFH42726.1| hypothetical protein ARALYDRAFT_496379 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 429

 Score = 92.7 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 98/303 (32%), Gaps = 34/303 (11%)

Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336
           YL        A +         G          A      T+       A    E+ +  
Sbjct: 68  YLPMAPMSAFAFYRYMSTAPGVGSEKIGVMSDIAEVITDSTLQDVPAQAAAAVSEVTLAA 127

Query: 337 GWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
              +F    +   +   ++     +  +I++ T+ ++    PL  KQ   T  +  ++P+
Sbjct: 128 ADSFFPIAALQHCIDMVHSFTGFGWWASIVVATILIRSSTVPLLIKQMKDTTKLALMRPR 187

Query: 396 IDELRE----KFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           ++ +RE    K   S      +  ++ L+K + + P      + +Q P+F   +  I   
Sbjct: 188 LESIREEMQNKGMDSVTMAEGQKKMKNLFKEYGVTPFTPMKGMFIQGPLFICFFLAIRNM 247

Query: 451 LE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
            E           W  DL   D                      I P+I  L+  I ++ 
Sbjct: 248 AEKVPSFQTGGALWFTDLTTPDSLY-------------------ILPVITGLTFLITVEC 288

Query: 508 SPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           +        P       +     ++ V    SFP  +  YW  SN+ S++   VI +   
Sbjct: 289 NAQEGMEGNPMAGTVKNVCRGFALLTVPMTMSFPQAIFCYWITSNLFSLMYGLVIKRPQV 348

Query: 562 AEI 564
            ++
Sbjct: 349 KKM 351


>gi|312142024|ref|YP_004009360.1| integral membrane protein [Rhodococcus equi 103S]
 gi|325677525|ref|ZP_08157189.1| membrane protein OxaA [Rhodococcus equi ATCC 33707]
 gi|311891363|emb|CBH50684.1| putative integral membrane protein [Rhodococcus equi 103S]
 gi|325551772|gb|EGD21470.1| membrane protein OxaA [Rhodococcus equi ATCC 33707]
          Length = 363

 Score = 92.7 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/298 (18%), Positives = 107/298 (35%), Gaps = 59/298 (19%)

Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++  ++ +            + +A+M     ++ + +    KQ  +T  
Sbjct: 1   MLDFIYYPVSWILWVWHKVFGAVLGPDNGFAWALAVMFLVFTLRAILYKPFVKQVRTTRQ 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447
           M+ +QP+I  L++K+ +   Q +   M +L K H  NP+ GC P+LLQ PVF  ++ V+ 
Sbjct: 61  MQELQPQIKALQKKYSK-DRQRMALEMQKLQKEHGFNPVMGCLPVLLQAPVFIGLFHVLR 119

Query: 448 ----------------------------------SISLEMRHAPFWGWIKDLAAADPTNI 473
                                              +S  +  AP    I    A      
Sbjct: 120 SFNRTGTGMGQLGMTPEQNAAIGNYAFSPDDVQSFLSARLFGAPISAAITTPQAQ--LEA 177

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK------MSPPPADKGQAMI----LNWM 523
           F L+G +P  L          +I S++     +       +   A+   A++    L   
Sbjct: 178 FGLYGTVPTVLNIAAVAIPLMVIASVATHFNSRASVARQSAAAAANPQSAIMNKLALWVF 237

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR--LRSTFSKNYN 579
           P+  +         +++YW  +N+ +  QQ ++ +   AE     +  +         
Sbjct: 238 PLGVLVGGPFLMIAILLYWVSNNIWTYAQQHIVFRRIDAEEAAKKQAVIERRADNAPK 295


>gi|256372785|ref|YP_003110609.1| 60 kDa inner membrane insertion protein [Acidimicrobium
           ferrooxidans DSM 10331]
 gi|256009369|gb|ACU54936.1| 60 kDa inner membrane insertion protein [Acidimicrobium
           ferrooxidans DSM 10331]
          Length = 336

 Score = 92.7 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 33/254 (12%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
             F  + + +  +++++Y ++ ++GIAI L TV V +   PL  +   S   M+ IQPK+
Sbjct: 9   EIFRPLFELLAGIVTFWYAIIPSYGIAIALLTVTVMVALSPLTIRSTRSMLQMQAIQPKL 68

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEM 453
            EL+ +        L +A  +L+K   ++PL GC P+LLQ P+ F +Y VI     ++  
Sbjct: 69  KELQ-RQYGKDRAGLAEAQQRLFKEEGVSPLGGCLPMLLQFPLLFVMYDVIRGLTHTVTS 127

Query: 454 RHAPFWGWI-------------KDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMS 498
            HA     +              D    D   I      L  ++     +   +  +I  
Sbjct: 128 HHAIVAAPLYISHASKLYKNLVADRGHMDFVGINLALTPLHLHVGFVHALPYYVLVLIAV 187

Query: 499 LSMFIQMK----MSPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
              ++Q++     +P  A         Q        VVF       PAG+ +Y+  S + 
Sbjct: 188 GIQYLQIQQIASKNPTAAAANRSALLTQQ----LTTVVFGVIYLDVPAGVAVYFLVSGLF 243

Query: 549 SIVQQAVIMKMHGA 562
            + QQ V+ +    
Sbjct: 244 RVAQQEVMWRRDPV 257


>gi|6117974|gb|AAF03934.1|AF139908_4 membrane protein homolog [Listeria monocytogenes]
          Length = 237

 Score = 92.7 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 39/250 (15%)

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ-------- 393
           I      +M     + GN+GIAI++TT+ ++ L  PL  +   +   M++          
Sbjct: 1   IQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEID 60

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLE 452
                L+    +     +QK M+ +Y  +NINP+  GC P+L+Q+P+  A Y  I  S E
Sbjct: 61  EIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSE 120

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
           +  +  + W  +L + D                      +  II  L    Q  +S    
Sbjct: 121 IA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSMIGY 157

Query: 513 DKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE---IG 565
              Q   +  +    P++ +F   + P+ L +YW+   +    Q  +  K++  +   I 
Sbjct: 158 SPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHPEIK 217

Query: 566 LIDRLRSTFS 575
           ++++    F 
Sbjct: 218 VMEQEEKEFE 227


>gi|52786308|ref|YP_092137.1| OxaA-like protein precursor [Bacillus licheniformis ATCC 14580]
 gi|319645111|ref|ZP_07999344.1| YqjG protein [Bacillus sp. BT1B_CT2]
 gi|52348810|gb|AAU41444.1| YqjG [Bacillus licheniformis ATCC 14580]
 gi|317392920|gb|EFV73714.1| YqjG protein [Bacillus sp. BT1B_CT2]
          Length = 274

 Score = 92.7 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 34/216 (15%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP--------KIDELREKFKQSP 407
             GN+G++I+  T+ V++L FPL   QY     M+                L++      
Sbjct: 59  FHGNYGLSIIFVTIIVRVLVFPLFANQYKKQRAMQEKMALVKPELDAIQSRLKKTKDPVK 118

Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            + +Q+ M+QLY+ HNINPL  GC P+L+Q P+    Y  I  + E+             
Sbjct: 119 QREIQQEMMQLYQKHNINPLAMGCLPMLIQFPILIGFYYAIRSTPEIA------------ 166

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-----PADKGQAMILN 521
               ++ F  F +    +   +  G    +  +  ++  K++       PA +  A I+ 
Sbjct: 167 ----SHSFLWFNLGHSDIIVSLSAG---FMYFIQFYVSQKLNAQNAQSNPAAQQSAKIMG 219

Query: 522 -WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            + PV+      + PA L +YW  S ++  +Q  V+
Sbjct: 220 FFFPVMMTIFSINVPAALPLYWLTSGLLLTIQSVVL 255


>gi|255025839|ref|ZP_05297825.1| OxaA-like protein precursor [Listeria monocytogenes FSL J2-003]
          Length = 229

 Score = 92.7 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 99/242 (40%), Gaps = 39/242 (16%)

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ--------PKIDELRE 401
           M     + GN+GIAI++TT+ ++ L  PL  +   +   M++               L+ 
Sbjct: 1   MFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKR 60

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
              +     +QK M+ +Y  +NINP+  GC P+L+Q+P+  A Y  I  S E+  +  + 
Sbjct: 61  ATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIA-SHTFL 119

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520
           W  +L + D                      +  II  L    Q  +S       Q   +
Sbjct: 120 WF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSMIGYSPEQKKQM 157

Query: 521 NWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE---IGLIDRLRST 573
             +    P++ +F   + P+ L +YW+   +    Q  +  K++  +   I ++++    
Sbjct: 158 KIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHPEIKVMEQEEKE 217

Query: 574 FS 575
           F 
Sbjct: 218 FE 219


>gi|52080933|ref|YP_079724.1| OxaA-like protein [Bacillus licheniformis ATCC 14580]
 gi|52004144|gb|AAU24086.1| translocase for membrane proteins OxaA2 [Bacillus licheniformis
           ATCC 14580]
          Length = 273

 Score = 92.7 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 34/216 (15%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP--------KIDELREKFKQSP 407
             GN+G++I+  T+ V++L FPL   QY     M+                L++      
Sbjct: 58  FHGNYGLSIIFVTIIVRVLVFPLFANQYKKQRAMQEKMALVKPELDAIQSRLKKTKDPVK 117

Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            + +Q+ M+QLY+ HNINPL  GC P+L+Q P+    Y  I  + E+             
Sbjct: 118 QREIQQEMMQLYQKHNINPLAMGCLPMLIQFPILIGFYYAIRSTPEIA------------ 165

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-----PADKGQAMILN 521
               ++ F  F +    +   +  G    +  +  ++  K++       PA +  A I+ 
Sbjct: 166 ----SHSFLWFNLGHSDIIVSLSAG---FMYFIQFYVSQKLNAQNAQSNPAAQQSAKIMG 218

Query: 522 -WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            + PV+      + PA L +YW  S ++  +Q  V+
Sbjct: 219 FFFPVMMTIFSINVPAALPLYWLTSGLLLTIQSVVL 254


>gi|172041701|ref|YP_001801415.1| putative inner membrane protein translocase component YidC
           [Corynebacterium urealyticum DSM 7109]
 gi|171853005|emb|CAQ05981.1| preprotein translocase YidC subunit [Corynebacterium urealyticum
           DSM 7109]
          Length = 324

 Score = 92.7 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 111/312 (35%), Gaps = 62/312 (19%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            F         +F  K    ++     +   + ++I+   V +++L       Q  S+  
Sbjct: 3   NFIYYPISAVLWFWHKVFGYVLDPTAGIT--WALSIVFLVVTIRILLVKPTANQLRSSRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447
           M+  QPK+ EL+ K+     Q L   + +  +   + P+A C P+L+Q+P+F  ++ V+ 
Sbjct: 61  MQEFQPKMKELQRKYAN-DQQKLMVEVRKAQQEMGVRPMAACLPMLVQMPIFIGLFHVLR 119

Query: 448 -------------SISLEMRHAPFWGW-----------------IKDLAAADP--TNIFT 475
                            E R+ P + +                 +    + DP     F+
Sbjct: 120 SFNRTGTGTGQLGMSIEETRNTPNYVFGVEEVQSFLDARLFGAPLSSYISMDPSGYGAFS 179

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLS--MFIQMKMSPPPADKGQAM--------------- 518
             GI P +    +   + P+++  +  M    ++S     K QA                
Sbjct: 180 PAGIAPDFTKANIIAVVLPLMLGAAVIMHFTARLSLNRNKKRQANNPKPAADDLKAQQMQ 239

Query: 519 ---------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
                    +L +MP++ +     +  GL +Y   + + + +QQ ++  +   E     +
Sbjct: 240 MQMDMMQRIMLWFMPLIILAGGFLWQVGLALYMFTNGLWTFIQQRILFGIMDKEEEEERQ 299

Query: 570 LRSTFSKNYNSQ 581
            +    +    +
Sbjct: 300 AKLEARRTSAPK 311


>gi|115757014|ref|XP_784750.2| PREDICTED: similar to Oxa1l protein [Strongylocentrotus purpuratus]
 gi|115961416|ref|XP_001176782.1| PREDICTED: similar to Oxa1l protein [Strongylocentrotus purpuratus]
          Length = 228

 Score = 92.4 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 30/150 (20%)

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468
             + Q  K +++NPL     ILLQ P+F      + ++ ++ +E        W  DL  +
Sbjct: 1   MELQQFMKKNDVNPLKSFAGILLQAPIFISFFIGLRRMATLPVESMQTGGLWWFTDLTTS 60

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM------SPPPADKGQAMILNW 522
           DP                       P+I SLSMF+ M++      S   A K    +L  
Sbjct: 61  DPYY-------------------ALPVIASLSMFLVMELGGEAGVSNAQAQKM-RNVLRV 100

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           MP V +  ++S P  +  YW  SN  S+ Q
Sbjct: 101 MPFVVLPFIASLPKAVFCYWLTSNFFSVFQ 130


>gi|148989975|ref|ZP_01821250.1| SpoIIIJ family protein [Streptococcus pneumoniae SP6-BS73]
 gi|149003634|ref|ZP_01828499.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69]
 gi|237650993|ref|ZP_04525245.1| OxaA-like protein precursor [Streptococcus pneumoniae CCRI 1974]
 gi|237822551|ref|ZP_04598396.1| OxaA-like protein precursor [Streptococcus pneumoniae CCRI 1974M2]
 gi|147758366|gb|EDK65366.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69]
 gi|147924635|gb|EDK75721.1| SpoIIIJ family protein [Streptococcus pneumoniae SP6-BS73]
          Length = 308

 Score = 92.4 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 77/209 (36%), Gaps = 24/209 (11%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           ILLQ+P F AIY     +  +  A + G                   +P   P  + V  
Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551
             ++  L   + +        + Q   + +M P++ V      PA + +YW     + I+
Sbjct: 184 AGVLYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243

Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           QQ ++   +     L  ++R   +KN + 
Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPSK 270


>gi|308804920|ref|XP_003079772.1| putative cytochrome oxidase assembly protein (ISS) [Ostreococcus
           tauri]
 gi|116058229|emb|CAL53418.1| putative cytochrome oxidase assembly protein (ISS) [Ostreococcus
           tauri]
          Length = 337

 Score = 92.4 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 41/251 (16%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           E++      +     +   M YF+      + +AI+  TVF++ + FPL   Q  +TA M
Sbjct: 60  EVVPVAVQSWPTTAALMYAMEYFHVAHGLEWWLAIVGATVFMRTVTFPLVVMQMRNTARM 119

Query: 390 KNIQPKIDELREKFKQSPPQ------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
           +  +P+++ L+ K K +P Q           M +++K +++NP     P+L+  PVF + 
Sbjct: 120 QLCKPELEALQAKMKSNPSQDPELATAYYAEMQKVWKKYDVNPFKSFAPVLINAPVFISF 179

Query: 444 YKVISI------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
           Y  IS       S E      +    DL+ ADPT                      PI+ 
Sbjct: 180 YFAISKMAAGVPSFETGGPSMY---PDLSIADPTYS-------------------LPILS 217

Query: 498 SLSMFIQMKM-SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           SL+    +++ +       Q+  + W      V  V   +SFP G+ +YW  SN+ S VQ
Sbjct: 218 SLTFLASVELGTVEGMQTSQSAQMKWFLRALAVAMVPLTASFPQGVFVYWITSNMFSGVQ 277

Query: 553 QAVIMKMHGAE 563
            + I +  G +
Sbjct: 278 TS-ITRTKGFK 287


>gi|260103137|ref|ZP_05753374.1| membrane protein OxaA [Lactobacillus helveticus DSM 20075]
 gi|260083047|gb|EEW67167.1| membrane protein OxaA [Lactobacillus helveticus DSM 20075]
          Length = 320

 Score = 92.4 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 47/268 (17%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYVS 385
               G + ++ + +   +        +        G  I++ TV V+L+  PL   Q   
Sbjct: 33  APHSGIYGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQNK 92

Query: 386 TANMKNIQPKIDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCWPIL 434
           +   +    ++          ++ K      Q+       +LY  + ++     GC P++
Sbjct: 93  SVRQQEKMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLPLI 152

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ + IY+ +  S ++ H+ F+G    L+                         +  
Sbjct: 153 IQLPIMWGIYQAVFYSPQLAHSTFFG--ISLSQK---------------------SVVLA 189

Query: 495 IIMSLSMFIQMKMS----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           II ++   IQ  +S    P    K    ++ + P++ +F   SF   L +YW+  N++ I
Sbjct: 190 IIATIFTVIQGYISLIGIPEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLVMI 249

Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           +QQ ++  +      +   +        
Sbjct: 250 IQQVIVTFILT--PSVKKHIADELKDKP 275


>gi|302388594|ref|YP_003824416.1| membrane protein insertase, YidC/Oxa1 family [Clostridium
           saccharolyticum WM1]
 gi|302199222|gb|ADL06793.1| membrane protein insertase, YidC/Oxa1 family [Clostridium
           saccharolyticum WM1]
          Length = 427

 Score = 92.0 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 84/258 (32%), Gaps = 33/258 (12%)

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
               +      LV    I   L  V   +  +  + K              +D +     
Sbjct: 105 YGTSMTGGCVQLVIQMPILFALYQVIYHIPAYVQSVKAVYENVVTAINSLGVDHVGML-- 162

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI-PVFFAIYKVISISL---------EMR 454
               Q      I L +  +++   G    L Q+ P  ++  +V+  S+         ++ 
Sbjct: 163 ---TQFAADNKINLSRIGSLSSSNGMVDYLYQLNPSQWSSLQVLFPSIKETIAVNAAQIS 219

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------ 508
           H   +  I   +        +     P     F    + PI+  LS +   ++       
Sbjct: 220 HMNSFLGINLASTP------SSVLFPPGGGFHFSLAILIPILAGLSQWFSTRLMTVNQPQ 273

Query: 509 -----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                     +    +   MP++ VF   +F +G+ IYW  S+V  I+QQ  + + H  +
Sbjct: 274 HGNDENNTMAQSMKSMNTIMPLMSVFFCFTFASGIGIYWIASSVFQIIQQVAVNR-HLNQ 332

Query: 564 IGLIDRLRSTFSKNYNSQ 581
           I + + ++    K    +
Sbjct: 333 IDMDEMIKKNVEKANKKR 350


>gi|298709559|emb|CBJ48574.1| Oxa1 or Cox18/Oxa2 homolog, mitochondrial integral inner membrane
           protein [Ectocarpus siliculosus]
          Length = 552

 Score = 92.0 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 73/220 (33%), Gaps = 30/220 (13%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
               ++M      +           +  +L         +         + + +   ++ 
Sbjct: 254 YWEAIVMVSVAARIAVLPAVATFLGMSKRLNMIKPEMAVHQGKMQDIKNRMEANPEIKEA 313

Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS---LEMRHAPFWG 460
             +   ++ + M  L K H I+       +  Q PVF +++                   
Sbjct: 314 AMAEMMLVSQEMGNLLKQHRIHFPKMMLSMFAQFPVFISLFLATRDMGTYFPGYMTGGLD 373

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADK--- 514
           W+ +L A DPT                      PI+ S SM + M++    P        
Sbjct: 374 WMMNLNAPDPTWT-------------------LPILTSGSMILLMELGSDMPAAHGPDKP 414

Query: 515 --GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
                ++   M VVFV    S PAG+++YW+ +NV  ++Q
Sbjct: 415 NFNPKVMFRVMSVVFVPVAFSMPAGVLVYWTTTNVFGMLQ 454


>gi|299143467|ref|ZP_07036547.1| stage III sporulation protein J [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298517952|gb|EFI41691.1| stage III sporulation protein J [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 232

 Score = 92.0 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 21/209 (10%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           F ++I+++T+ +KLL  P+      +   M  +QP+I++L++K++   P+ L     QLY
Sbjct: 24  FALSIIISTIIIKLLVVPINISMIKNQKKMAELQPEIEKLKKKYQN-DPKTLAVKQQQLY 82

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           K  N N L+GC P++LQ  V  A Y+V          P      D A  D  +    +  
Sbjct: 83  KEANYNMLSGCLPMILQFVVLIAFYRVFW-------EPAKYAFTDKAMFDAMSKNFFYIA 135

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQ---------MK-MSPPPADKGQAMILNWMPVVFVF 529
               L       I  II +++ F+           K M    ++     ++  MP++   
Sbjct: 136 ---NLQEKDPTMILGIIAAITTFLTSFVSNQNPAQKTMQNKQSNSMMTSMMIVMPIMIFT 192

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
               F +GL++YW+ SNV +IVQQ +  +
Sbjct: 193 MARKFQSGLVLYWTVSNVFAIVQQLITNR 221


>gi|213408000|ref|XP_002174771.1| inner membrane protein oxa1-2 [Schizosaccharomyces japonicus
           yFS275]
 gi|212002818|gb|EEB08478.1| inner membrane protein oxa1-2 [Schizosaccharomyces japonicus
           yFS275]
          Length = 368

 Score = 92.0 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 85/252 (33%), Gaps = 41/252 (16%)

Query: 337 GWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
              ++    +  ++   +      +  +I  T + +++L FPL      +++ M  I P+
Sbjct: 85  THTWWPYPYLQSILEVIHVYSGMPWWASIAATAIGMRVLMFPLMLGMIRTSSRMAAIGPQ 144

Query: 396 IDELREKFKQSP-------PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           +         +         Q     + +LYK + INP+       +Q  +F + +  + 
Sbjct: 145 VAGHMATLHGARLAGDSLAMQKATLEVQRLYKENGINPMRLLRAPFIQGILFVSFFYALK 204

Query: 449 ISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
              +          +GW+ DL   DP +                     PI   L M+  
Sbjct: 205 TMADFPVPGLEHGGFGWVMDLTKPDPMH-------------------AIPIANGLLMWAN 245

Query: 505 MKM------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-- 556
           +++      +  P           M +       +FP  + +YW  SN+ SI Q   +  
Sbjct: 246 IELGSENGTNKSPVAPSMKRFFRLMCLASPLFTMNFPMAIFMYWLPSNLFSIFQGFFLRS 305

Query: 557 --MKMHGAEIGL 566
             ++ +     +
Sbjct: 306 KRIRRYLDIPEI 317


>gi|291541858|emb|CBL14968.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
           [Ruminococcus bromii L2-63]
          Length = 335

 Score = 92.0 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 58/286 (20%), Positives = 117/286 (40%), Gaps = 65/286 (22%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
              F F+   +  ++   + L+ +FG++I++ T+ V+L  FP   KQ  S A    +  K
Sbjct: 1   MQIFGFLGSLLGYVLWGAFYLLKDFGLSIIVFTIIVRLCMFPFTIKQQKSMAGTARLSKK 60

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI----LLQIPVFFAIYKVISISL 451
             E++EK+K +  Q  Q+ + +LY+   + P  GC  +    L+   VF+A+   ++ +L
Sbjct: 61  QKEIQEKYKNNR-QKAQEEISKLYEKEGVKPTGGCLTMIVPFLVLFGVFYAVAYPLTNTL 119

Query: 452 EMRHAP--------------------------FWGWIKDLA------------AADPTNI 473
            +  A                              ++KD +            +AD  N 
Sbjct: 120 HIDSAKVTEALNYVNTIPGYTAASGATNATYQEIYFLKDFSCFQNIDAIQQIFSADQLNT 179

Query: 474 FTLF-----------GILPFYLPGFMHVGIWPII----MSLSMFIQMKMSPPPADKGQAM 518
            T+F             +P     +  + ++P+I      L+ FI M+++    +  Q  
Sbjct: 180 ITMFEKGFNTFGMNLFAIPQDYGLWSPMILFPVICFASNVLTQFITMRINGKN-NPMQQQ 238

Query: 519 ------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                 ++  MP+   +     P+ +  YW  S+++S+VQ  ++ K
Sbjct: 239 QGCMKVMMYAMPLFSAYIAYIVPSAVAFYWIVSSLVSLVQSVIVGK 284


>gi|227431097|ref|ZP_03913155.1| Oxa1 family cytochrome oxidase biogenesis protein [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
 gi|227353137|gb|EEJ43305.1| Oxa1 family cytochrome oxidase biogenesis protein [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
          Length = 307

 Score = 92.0 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 95/268 (35%), Gaps = 43/268 (16%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNL---VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
                   + +I +P+  LM+   +    V   G AI++ T   +L+  P    Q V+T 
Sbjct: 23  GYNQHSRMYRWIGQPLAELMTNIAHFIGGVNGIGWAIIVITAIFRLILLPFFLNQQVNTT 82

Query: 388 NMKNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQI 437
             +    K+           R+       Q    AM+ LY+ ++++ + G     + +Q+
Sbjct: 83  VNQIKMQKLKPEIDKLQTLSRKAATTEEQQKASMAMMSLYRENDVSVIGGISFLTMAMQL 142

Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
           P+F  +Y  I  +  ++ A F G+  DL                          ++ I+ 
Sbjct: 143 PIFSGLYSAILHAPALQGASFLGF--DLGKP---------------------QLVFAIVA 179

Query: 498 SLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            +   IQ  +      + Q      ++   PV+           + +Y+    + +++Q 
Sbjct: 180 GIIYLIQAWLMMQHMPEEQRKTSAAMMLVSPVMIFVFAMIASGAIGLYFVIGGIFALIQT 239

Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            +    H    GL  R+ + F     + 
Sbjct: 240 LI---QHYQRPGLEKRVTAEFKIQKTAD 264


>gi|266620970|ref|ZP_06113905.1| stage III sporulation protein J [Clostridium hathewayi DSM 13479]
 gi|288867392|gb|EFC99690.1| stage III sporulation protein J [Clostridium hathewayi DSM 13479]
          Length = 428

 Score = 92.0 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/338 (12%), Positives = 97/338 (28%), Gaps = 16/338 (4%)

Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318
           +A+V     +  F     +           F+     ++   ++         +   P +
Sbjct: 16  FATVLGIIMDWLFKLTSIFGIQNIGLCIILFTLVTKLLMFPLTLKQQKSSKLMSIMQPEL 75

Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378
           +  +      + +  +        A       S     +       +L  ++  +   P 
Sbjct: 76  NAIQAKYKGKKDQESMMKQNVEIQALYEKYGTSMTGGCLQLVIQMPILFALYQVIYHIPA 135

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-LAGCWPIL--L 435
                               +      +      K  + + K    N  L      L   
Sbjct: 136 YVSSVKDVFMNVVTSITSLGVDHVGMLTQFATDNKVNMAMVKDMATNNGLVDFLYQLNPT 195

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-P 494
           Q      ++  I  ++    A        L     +  F++     F       + I  P
Sbjct: 196 QWSALQDLFPSIQGTIVENAAKIEHMNSFLGINLASTPFSVMFPNGFTGGFHFSLAILIP 255

Query: 495 IIMSLSMFIQMKMSP-----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
           I+  LS ++  ++                 +   M+   MP++ VF   +F +G+ IYW 
Sbjct: 256 ILAGLSQWLSARLMTVNQPSTGNDDGNSMAQSMKMMNTMMPLMSVFFCFTFASGIGIYWI 315

Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            S+V  ++QQ ++ +     I + + ++    K    +
Sbjct: 316 ASSVFQVIQQVLVNRYMD-RIDIDEMVKQNVEKANKKR 352


>gi|148927718|ref|ZP_01811160.1| 60 kDa inner membrane insertion protein [candidate division TM7
           genomosp. GTL1]
 gi|147886931|gb|EDK72459.1| 60 kDa inner membrane insertion protein [candidate division TM7
           genomosp. GTL1]
          Length = 320

 Score = 92.0 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 60/281 (21%), Positives = 120/281 (42%), Gaps = 44/281 (15%)

Query: 341 FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
            +     +L++ +  + GN FG+A+++ T+ V+   +PL KKQ   T  M+ IQP++ ++
Sbjct: 5   IVQPIFNVLLAIYGIIPGNDFGVALIIFTILVRFAMWPLLKKQLHQTRLMRQIQPELKKV 64

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH---- 455
           + + K +   +  + M++LY+   + P +    +L+Q+P+F A+++VI I    RH    
Sbjct: 65  KARAKGNK-MLESQMMMELYRERGVRPFSSIGLLLIQLPIFIALFRVIQILTSQRHDISR 123

Query: 456 -----APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP------IIMSLSMFIQ 504
                    G I++L A        LFG++          G++       I+ ++  +IQ
Sbjct: 124 YTYDFMQNLGAIRELVAHPDKFNEMLFGVINLTQHAVTSQGVYVPLLLLAILAAVLQYIQ 183

Query: 505 MKMSPPPADK-------------------------GQAMILNWMPVVFVFALSSFPAGLI 539
            K   P  D                              ++  +P V  F     P  L+
Sbjct: 184 SKQVLPQQDSKKKLRDILKDSSKGKAVDQSEVTAIMSGRMIMLLPAVLFFIGLYLPGALV 243

Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           +Y++ S++++I QQ V++     E+  I        +    
Sbjct: 244 LYYAVSSLVAIAQQRVVLSKDLEEMETIA--DKDNKRTPKK 282


>gi|89097506|ref|ZP_01170395.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911]
 gi|89087802|gb|EAR66914.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911]
          Length = 262

 Score = 91.6 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 89/231 (38%), Gaps = 36/231 (15%)

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
                  GNFG++I+L T+ ++L   PL  KQY    +MK     +    +K +    + 
Sbjct: 50  MVAELFNGNFGLSIILITLIIRLALMPLMLKQYKRQQDMKGKMDVLKPEMDKIQAQLKKT 109

Query: 411 LQKA--------MIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
             +         M  LY+ H +NPL  GC PIL+Q+P+    Y  I  S E+     + W
Sbjct: 110 KDQKEQQKLQQEMFALYRKHGVNPLNMGCLPILIQMPILMGFYYAIRSSHEIATHS-FLW 168

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521
             +L   D                      +      +  ++Q K++       Q   + 
Sbjct: 169 F-NLGQPD---------------------LLITAAAGIVYYLQFKVTQANMPVQQQNQMK 206

Query: 522 WM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
           +M    PV+ V    S PA L +YW+      IVQ  +  +++       +
Sbjct: 207 FMGLLSPVMIVVFSFSAPAALPLYWTVGGTFLIVQTLIGRRLYQTAPAAKE 257


>gi|108802369|ref|YP_642566.1| putative inner membrane protein translocase component YidC
           [Mycobacterium sp. MCS]
 gi|119866062|ref|YP_936014.1| putative inner membrane protein translocase component YidC
           [Mycobacterium sp. KMS]
 gi|108772788|gb|ABG11510.1| 60 kDa inner membrane insertion protein [Mycobacterium sp. MCS]
 gi|119692151|gb|ABL89224.1| 60 kDa inner membrane insertion protein [Mycobacterium sp. KMS]
          Length = 367

 Score = 91.6 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 94/270 (34%), Gaps = 39/270 (14%)

Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384
                 +++                     +    + +++M     ++ + +    +Q  
Sbjct: 2   FNWFSLDIIYYPVSAIMWVWYKAFAFLLGPDNFFAWALSVMFLVFTLRAILYKPFVRQIR 61

Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
           +T  M+ +QP+I  L++K+     Q +   M +L K H  NP+ GC P+L QIPVF  +Y
Sbjct: 62  TTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQKEHGFNPILGCLPMLAQIPVFLGLY 120

Query: 445 KVISI-------------SLE--------MRHAPFWGWIKD---LAAADPTNIFTLFGIL 480
            V+               S+E        +  A   G   D     A     +    G+ 
Sbjct: 121 HVLMSFNRTQTGIGRLGLSVEENRSLPNYLFSATDVGHFLDANLFGAPLGATMIQQHGLE 180

Query: 481 PFY----LPGFMHVGIWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMPVV 526
            F     +   +      ++  ++          + +P  A   Q  ++        P+ 
Sbjct: 181 AFTEFNRVAVVVVGVPIMLLAGIATHFNSRASVARQTPEAAANPQTALMNKLALYVFPLG 240

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            V      P  +I+YW  +N+ +  QQ  +
Sbjct: 241 VVVGGPFLPLAVIMYWLANNIWTYGQQHYV 270


>gi|328464786|gb|EGF36101.1| hypothetical protein AAULH_09168 [Lactobacillus helveticus MTCC
           5463]
          Length = 320

 Score = 91.6 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 47/268 (17%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYVS 385
               G + ++ + +   +        +        G  I++ TV V+L+  PL   Q   
Sbjct: 33  APHSGIYGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQNK 92

Query: 386 TANMKNIQPKIDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCWPIL 434
           +   +    ++          ++ K      Q+       +LY  + ++     GC P++
Sbjct: 93  SVRQQEKMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLPLI 152

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ + IY+ +  S ++ H+ F+G    L+                         +  
Sbjct: 153 IQLPIMWGIYQAVFYSPQLAHSTFFG--ISLSQK---------------------SVVLA 189

Query: 495 IIMSLSMFIQMKMS----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           II ++   IQ  +S    P    K    ++ + P++ +F   SF   L +YW+  N++ I
Sbjct: 190 IIATIFTVIQGYISLIGIPEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLVMI 249

Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           +QQ ++  +      +   +        
Sbjct: 250 IQQVIVTFILT--PSVKKHVADELKDKP 275


>gi|257065515|ref|YP_003145187.1| preprotein translocase subunit YidC [Slackia heliotrinireducens DSM
           20476]
 gi|256793168|gb|ACV23838.1| preprotein translocase subunit YidC [Slackia heliotrinireducens DSM
           20476]
          Length = 257

 Score = 91.6 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 106/225 (47%), Gaps = 9/225 (4%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            +      +F  + +F N+ G++G+AI++ TV  +++  P+   Q  S+  M+ +QP + 
Sbjct: 1   MWEAFKDWIFDCIQFFANVCGDWGLAIIIITVIFRVIVSPIMHSQIKSSYQMQKVQPLMQ 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           E++ K+       +Q+ M +LY   + NPLAGC P+ LQ+P+F A+++ +    E+    
Sbjct: 61  EIQTKYAN-DQARMQEEMQKLYAETHFNPLAGCLPMFLQMPIFIAMFQTLR---ELASHG 116

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
                      +     T   +       F+   +  ++ + + F+ M +    +D  Q 
Sbjct: 117 TGEVYTFYTIVEDLTK-TPKDMWAVGFGDFLPYLVLMLVFAFATFVPMMLQNMKSDSAQR 175

Query: 518 MILNWMPVVFV----FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
             +  M  +      +   S PAG++++W  S++I I QQ +  +
Sbjct: 176 NQMLIMGGMMTLMMLWISWSSPAGVLLFWGASSIIGIAQQQITQR 220


>gi|161507844|ref|YP_001577808.1| hypothetical protein lhv_1585 [Lactobacillus helveticus DPC 4571]
 gi|160348833|gb|ABX27507.1| hypothetical protein lhv_1585 [Lactobacillus helveticus DPC 4571]
          Length = 320

 Score = 91.6 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 100/270 (37%), Gaps = 47/270 (17%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQY 383
            +    G + ++ + +   +        +        G  I++ TV V+L+  PL   Q 
Sbjct: 31  NIAPHSGIYGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQ 90

Query: 384 VSTANMKNIQPKIDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCWP 432
             +   +    ++          ++ K      Q+       +LY  + ++     GC P
Sbjct: 91  NKSVRQQEKMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLP 150

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +++Q+P+ + IY+ +  S ++ H+ F+G    L+                         +
Sbjct: 151 LIIQLPIMWGIYQAVFYSPQLAHSTFFG--ISLSQK---------------------SVV 187

Query: 493 WPIIMSLSMFIQMKMS----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
             II ++   IQ  +S    P    K    ++ + P++ +F   SF   L +YW+  N++
Sbjct: 188 LAIIATIFTVIQGYISLIGIPEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLV 247

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
            I+QQ ++  +      +   +        
Sbjct: 248 MIIQQVIVTFILT--PSVKKHVADELKDKP 275


>gi|15903832|ref|NP_359382.1| OxaA-like protein precursor [Streptococcus pneumoniae R6]
 gi|116517062|ref|YP_817195.1| OxaA-like protein precursor [Streptococcus pneumoniae D39]
 gi|38503005|sp|Q8DNE1|OXAA2_STRR6 RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|15459474|gb|AAL00593.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116077638|gb|ABJ55358.1| SpoIIIJ family protein [Streptococcus pneumoniae D39]
          Length = 308

 Score = 91.6 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 76/209 (36%), Gaps = 24/209 (11%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           ILLQ+P F AIY     +  +  A + G                   +P   P  + V  
Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551
             ++  L   + +        + Q   + +M P++ V      PA + +YW     + I+
Sbjct: 184 AGVLYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243

Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           QQ ++   +     L  ++    +KN + 
Sbjct: 244 QQFIVN--YIVRPKLRKKVHEELAKNPSK 270


>gi|307707578|ref|ZP_07644059.1| membrane protein OxaA 2 [Streptococcus mitis NCTC 12261]
 gi|307616291|gb|EFN95483.1| membrane protein OxaA 2 [Streptococcus mitis NCTC 12261]
          Length = 308

 Score = 91.6 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 93/259 (35%), Gaps = 38/259 (14%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--------FPLAKKQYVSTA 387
           + W  F A     +  +  +    FG+AI++ T+ V+L+         +          A
Sbjct: 36  FIWNTFGAPMAEAIKYFATDQGLGFGMAIIIVTIIVRLIILPLGIYQSWKATLHSEKMNA 95

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
               ++P    L+E   Q      Q+A+    K H I+     GC+PILLQ+P F AIY 
Sbjct: 96  LKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIYF 155

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  A + G    L +     +    G+L +        G+             
Sbjct: 156 AAQHTEGVAQASYLG--IPLGSP-SMILVACAGVLYYLQSLLSLHGV------------- 199

Query: 506 KMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
                  D+ Q      +    P+  V      PA + +YW     + I+QQ ++   + 
Sbjct: 200 ------EDETQREQIKKMAYVSPITIVVFSLISPASVTLYWVVGGFMMILQQFIVN--YI 251

Query: 562 AEIGLIDRLRSTFSKNYNS 580
               L  ++R   +KN   
Sbjct: 252 VRPKLRKKVREELAKNPPK 270


>gi|325696358|gb|EGD38249.1| SpoIIIJ family protein [Streptococcus sanguinis SK160]
          Length = 296

 Score = 91.6 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391
             W          +  +  N    +G+AI++ T+ V+++        + K  + +  M  
Sbjct: 24  LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 83

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
            +P    ++E+ K +  Q      Q+ ++   K + ++     GC P+L+Q+P F A++ 
Sbjct: 84  FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 143

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  +  + WIKDLA +D                          I+ +  +IQ 
Sbjct: 144 AAQYTQGVAGSS-FLWIKDLAKSD---------------------LALTAIVGILYYIQS 181

Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            +S     D+ Q   +    +M P++ V      PA + +YW     I I+     +  +
Sbjct: 182 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINY 239

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
                L  ++   F KN   
Sbjct: 240 IIRPRLRKQVAEEFEKNPPK 259


>gi|317032058|ref|XP_001393915.2| hypothetical protein ANI_1_1524084 [Aspergillus niger CBS 513.88]
          Length = 496

 Score = 91.2 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 93/246 (37%), Gaps = 32/246 (13%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390
             +   + +  +  +   + +F+ + G      I+ T +FV+L           ++  + 
Sbjct: 121 KQLGLDFGWGFSSMIEYSVEHFHIMGGLPWWGAIVATGLFVRLGLLYPTLMAADTSTKLN 180

Query: 391 NIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
           NI+     LR +  Q+  +         +  + QL+K H I P     P+ + IP  F  
Sbjct: 181 NIKHLTTPLRTEMVQANYKNDLMEATRKRAELSQLHKDHGIKPWKAMIPM-IHIPFGFGC 239

Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           Y+V++    +           W++DL  +DP  I  L G +  +                
Sbjct: 240 YRVVNNMCSLPVPGLTTEHVAWLQDLTVSDPYYILPLIGSVILHHTLKKG--------GE 291

Query: 500 SMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-- 556
           +   QMK      D     +  + MP +    +++FP  L +Y+  ++V ++ Q  ++  
Sbjct: 292 TGMNQMK------DSAFKSLFLYGMPTISFLFMANFPGALQLYFLTTSVFALGQTYLLSS 345

Query: 557 --MKMH 560
              +  
Sbjct: 346 ATFRKM 351


>gi|16079445|ref|NP_390269.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310308|ref|ZP_03592155.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221314632|ref|ZP_03596437.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319555|ref|ZP_03600849.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323831|ref|ZP_03605125.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|321311869|ref|YP_004204156.1| OxaA-like protein [Bacillus subtilis BSn5]
 gi|1731070|sp|P54544|OXAA2_BACSU RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|1303958|dbj|BAA12613.1| YqjG [Bacillus subtilis]
 gi|2634823|emb|CAB14320.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ
           family) [Bacillus subtilis subsp. subtilis str. 168]
 gi|320018143|gb|ADV93129.1| OxaA-like protein precursor [Bacillus subtilis BSn5]
          Length = 275

 Score = 91.2 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 36/219 (16%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE--------LREKFKQSP 407
             G +G++I+L T+ V+++  PL   Q+      +     I          L++      
Sbjct: 59  FHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRIFQEKMAVIKPQVDSIQVKLKKTKDPEK 118

Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            + LQ  M++LY+ HNINPL  GC P+L+Q P+   +Y  I  + E+     + W   L 
Sbjct: 119 QKELQMEMMKLYQEHNINPLAMGCLPMLIQSPIMIGLYYAIRSTPEIASHS-FLWFS-LG 176

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------PPPADKGQ-AMI 519
            +D     +                   I+  +  +I  K+S      P      Q A +
Sbjct: 177 QSDILMSLSAG-----------------IMYFVQAYIAQKLSAKYSAVPQNPAAQQSAKL 219

Query: 520 LNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           + +  PV+      + PA L +YW  S +   VQ  V+ 
Sbjct: 220 MVFIFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNIVLQ 258


>gi|134078469|emb|CAK40411.1| unnamed protein product [Aspergillus niger]
          Length = 518

 Score = 91.2 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 93/246 (37%), Gaps = 32/246 (13%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390
             +   + +  +  +   + +F+ + G      I+ T +FV+L           ++  + 
Sbjct: 143 KQLGLDFGWGFSSMIEYSVEHFHIMGGLPWWGAIVATGLFVRLGLLYPTLMAADTSTKLN 202

Query: 391 NIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
           NI+     LR +  Q+  +         +  + QL+K H I P     P+ + IP  F  
Sbjct: 203 NIKHLTTPLRTEMVQANYKNDLMEATRKRAELSQLHKDHGIKPWKAMIPM-IHIPFGFGC 261

Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           Y+V++    +           W++DL  +DP  I  L G +  +                
Sbjct: 262 YRVVNNMCSLPVPGLTTEHVAWLQDLTVSDPYYILPLIGSVILHHTLKKG--------GE 313

Query: 500 SMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-- 556
           +   QMK      D     +  + MP +    +++FP  L +Y+  ++V ++ Q  ++  
Sbjct: 314 TGMNQMK------DSAFKSLFLYGMPTISFLFMANFPGALQLYFLTTSVFALGQTYLLSS 367

Query: 557 --MKMH 560
              +  
Sbjct: 368 ATFRKM 373


>gi|296333458|ref|ZP_06875911.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305675036|ref|YP_003866708.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ
           family) [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296149656|gb|EFG90552.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305413280|gb|ADM38399.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ
           family) [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 275

 Score = 91.2 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 86/223 (38%), Gaps = 44/223 (19%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE--------LREKFKQSP 407
             G +G++I+L T+ V+++  PL   Q+      +     I          L++      
Sbjct: 59  FHGEYGLSIILVTIIVRVVVLPLFVNQFKKQRIFQEKMAVIKPQVDSIQAKLKKTKDPEK 118

Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            + LQ  M++LY+ HNINPL  GC P+L+Q P+    Y  I  + E+     + W   L 
Sbjct: 119 QKELQMEMMKLYQEHNINPLAMGCLPMLIQFPIVIGFYYAIRSTPEIASHS-FLWFS-LG 176

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ----MKMS------PPPADKGQ 516
            +D     +                          FIQ     K+S      P      Q
Sbjct: 177 QSDILVSLS---------------------AGAMYFIQAYVAQKLSAKYSAVPQNPAAQQ 215

Query: 517 -AMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            A ++ +  PV+      + PA L +YW  S +   VQ  V+ 
Sbjct: 216 SAKLMVFIFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNIVLQ 258


>gi|322778978|gb|EFZ09389.1| hypothetical protein SINV_15992 [Solenopsis invicta]
          Length = 279

 Score = 91.2 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 98/233 (42%), Gaps = 35/233 (15%)

Query: 340 YFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  +  +   + + + NL   + + I+  TV  + L FPL      +   + N  P I E
Sbjct: 32  WSPSGIVQNFLEFMHINLNMPWWLTIVTATVCARALIFPLVINSQKNMIKVTNHMPVIQE 91

Query: 399 LREKFKQSPPQVLQKA-------MIQLYKTHNINPLAGCWPILLQIPVF----FAIYKVI 447
           + ++  ++               M+Q  K +N++        L+Q PVF    FA+ K+ 
Sbjct: 92  MHQRLTEARNSGDHMESAKAATEMMQYMKKNNVSMTKNFMAPLIQAPVFISFFFALKKMA 151

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           ++ +E      + W+KDL   DP                     I PI+ S++MFI +++
Sbjct: 152 NLPVESLKEGGFLWVKDLTVYDPYY-------------------IMPIVTSVTMFITIEL 192

Query: 508 SPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
               A+     +  +    +P + +  +  FP  ++ YW  +N +S++Q A +
Sbjct: 193 GTDGANIHAMGMFRYVLRAVPFIALPFMLHFPGTILTYWVATNTVSLLQTAFL 245


>gi|300780240|ref|ZP_07090096.1| membrane protein OxaA [Corynebacterium genitalium ATCC 33030]
 gi|300534350|gb|EFK55409.1| membrane protein OxaA [Corynebacterium genitalium ATCC 33030]
          Length = 389

 Score = 91.2 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 104/264 (39%), Gaps = 42/264 (15%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF----KQSPPQVLQKAM 415
           + ++I L  + V+ L  P     + S+  M  ++P+   L E++    +       +KA+
Sbjct: 32  WVLSICLLVLTVRGLLVPSYWSTFRSSRKMLMMRPEQIALEERYGASLEPDDITAHEKAL 91

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---SISLEMRHAPF-----------WGW 461
            +L K +  NPL+GC P L+Q+P    +Y+++   S+    R               +  
Sbjct: 92  KELNKEYGYNPLSGCIPPLVQLPFILGLYRLLIWMSVPENGRTGSDIGLLNPDDIAGFLE 151

Query: 462 IKDLAAADPTNI------FTLFGILPFYL-PGFMHVGIWPIIM-SLSMFIQMKMSPPPAD 513
              L    P  +      F   G     +    + + I+ II  + +MF+    S    D
Sbjct: 152 ASFLGVPLPAYVSMSQEQFAALGTTGDDVRAVAIPLLIFAIIFTTFNMFVSQLRSRVHMD 211

Query: 514 KGQAM----------ILNWMPVVFVFALSS--FPAGLIIYWSWSNVISIVQQ----AVIM 557
             + M          ++  +PV+  F   +   P  L++YW  SN+ ++ Q      ++ 
Sbjct: 212 WNERMAVRIYDLMWWLMLLIPVMLGFVGMTGLIPIALLMYWFISNLWTLCQTAIMWYLLT 271

Query: 558 KMHGAEIGLIDRLRSTFSKNYNSQ 581
           + +  E   ++ +    +   N +
Sbjct: 272 RKYPLEPHHLEHVEEARTDAQNKE 295


>gi|290995957|ref|XP_002680549.1| predicted protein [Naegleria gruberi]
 gi|284094170|gb|EFC47805.1| predicted protein [Naegleria gruberi]
          Length = 226

 Score = 90.8 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 80/208 (38%), Gaps = 32/208 (15%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-----A 414
           +  AIM TT+  + L  PL      ++A +  ++P + E  E          +K      
Sbjct: 6   WYGAIMATTILFRCLVLPLNIGLTRNSARLDQVRPILFEKSEIMASKTASEEEKVQAAVE 65

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIY----KVISISLEMRHAPFWGWIKDLAAADP 470
             +  K +  +PL      L+  P+F +++    ++     E R      W  DL++ DP
Sbjct: 66  FQETMKENKCHPLLNIISPLIMAPMFLSVFVSVERICLHDPECRGTGGLWWFDDLSSVDP 125

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM----ILNWMPVV 526
           T                      P+I +++  I ++M               ++ ++  V
Sbjct: 126 TAT-------------------LPVISAVTWLISVEMGAAEPRTETMRQVRSVMRFVAAV 166

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQA 554
            V    + P+G+ +YW  SN+ S++Q  
Sbjct: 167 MVPITGALPSGVFVYWITSNIFSMLQIY 194


>gi|213022848|ref|ZP_03337295.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 74

 Score = 90.8 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 501 MFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           MF   KMSP    D  Q  I+ +MPV+F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 1   MFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 59


>gi|225352375|ref|ZP_03743398.1| hypothetical protein BIFPSEUDO_03992 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156882|gb|EEG70251.1| hypothetical protein BIFPSEUDO_03992 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 344

 Score = 90.8 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 106/270 (39%), Gaps = 31/270 (11%)

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
           +    +              +             F++M     +  ++ ++I+   + V+
Sbjct: 3   QNQFLLDSGFWGWLYKLLYPVEWLMTQIMAVFHKFLVMLGMNEIGFSWVMSIVFLVLVVQ 62

Query: 373 LLFFPLAKKQYVSTANMK--------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424
              FPL  K       M+         +Q   ++ + K   +  + +Q+ M++LY+ ++ 
Sbjct: 63  ACVFPLFYKSMKGMRKMQAQMTVLQPKMQRIQNKYKGKNDPASKEAMQREMMKLYQDNDA 122

Query: 425 NPLAGC---WPILLQIPVFFAIYKVISISLEM-RHA---PFWGWIKDLAAADPTNIFTLF 477
           NP+ GC    P+ +Q PVF  ++  +S    + R            D+A A      T+F
Sbjct: 123 NPMGGCTSMLPMFVQGPVFMCMFYTLSAIPYIARGKFRDGQGLGAFDIATAKQFTSTTVF 182

Query: 478 GILPFY------LPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW 522
           G+          + G + + I+  +M   ++       K +          +    ++ W
Sbjct: 183 GVNVADNFTTAAVHGKVVIAIFVALMCFCLWFMQYNSMKRNMAQSAANKQTEMMQKMMLW 242

Query: 523 M-PVVFVFALSSFPAGLIIYWSWSNVISIV 551
           M P++++F+  + P  +++YW  +N+ +++
Sbjct: 243 MFPIMYIFSGIAMPFAVLVYWLTNNICNLL 272


>gi|323466128|gb|ADX69815.1| Preprotein translocase subunit YidC [Lactobacillus helveticus H10]
          Length = 324

 Score = 90.8 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 96/264 (36%), Gaps = 39/264 (14%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYVS 385
               G + ++ + +   +        +        G  I++ TV V+L+  PL   Q   
Sbjct: 37  APHSGIYGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQNK 96

Query: 386 TANMKNIQPKIDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCWPIL 434
           +   +    ++          ++ K      Q+       +LY  + ++     GC P++
Sbjct: 97  SVRQQEKMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLPLI 156

Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +Q+P+ + IY+ +  S ++ H+ F+G                   +       +   I  
Sbjct: 157 IQLPIMWGIYQAVFYSPQLAHSTFFG-------------------ISLSQKSVVLAIIAT 197

Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           I   +  +I +   P    K    ++ + P++ +F   SF   L +YW+  N++ I+QQ 
Sbjct: 198 IFTVIQGYISLIGIPEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLVMIIQQV 257

Query: 555 VIMKMHGAEIGLIDRLRSTFSKNY 578
           ++  +      +   +        
Sbjct: 258 IVTFILT--PSVKKHVADELKDKP 279


>gi|167516128|ref|XP_001742405.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163779029|gb|EDQ92643.1| predicted protein [Monosiga brevicollis MX1]
          Length = 235

 Score = 90.8 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 34/230 (14%)

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
                L   + + I  TT+ ++ L  PL      +   + NIQP++    ++ ++   + 
Sbjct: 18  FNTVMLDAPWAVGICATTILMRTLMLPLVFGSMRNNTILMNIQPQLQLHSQRIRECQTRN 77

Query: 411 LQ-------KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMRHAPFW 459
                      +  L+K H ++PL G  P+ +Q PVF + +  +     + +E       
Sbjct: 78  DHDGAAQAAANLNGLFKEHGVHPLKGLLPLFVQAPVFISFFMALRQMANLPIESMKTGGL 137

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADKGQ 516
            W  DL AADP                     + P+I S +M   ++         +   
Sbjct: 138 LWFTDLTAADPYY-------------------VLPVIASATMLATIEFGSEGVKQNNVMM 178

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
             +   + +V +    + P  + +YW  +N+ S+ Q  +++K+ G +  L
Sbjct: 179 KNVFRGLSIVLLPVTINLPTAIFVYWCTANMFSLSQ-MLMLKIPGLKKSL 227


>gi|199597202|ref|ZP_03210634.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001]
 gi|229552525|ref|ZP_04441250.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           rhamnosus LMS2-1]
 gi|258508719|ref|YP_003171470.1| preprotein translocase subunit YidC [Lactobacillus rhamnosus GG]
 gi|258539898|ref|YP_003174397.1| preprotein translocase YidC [Lactobacillus rhamnosus Lc 705]
 gi|199592006|gb|EDZ00081.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001]
 gi|229314077|gb|EEN80050.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           rhamnosus LMS2-1]
 gi|257148646|emb|CAR87619.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus GG]
 gi|257151574|emb|CAR90546.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus Lc
           705]
 gi|259650025|dbj|BAI42187.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
          Length = 330

 Score = 90.8 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 105/262 (40%), Gaps = 42/262 (16%)

Query: 337 GWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
            ++  I  P+  LM +    V    ++GIAI++ T+ V+L+  PL  +Q  +    +  Q
Sbjct: 42  TFYKIIGLPLQHLMEWIAGFVGSTSSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQEKQ 101

Query: 394 PKIDELREKFKQSPPQVLQKAMIQ-----LYKTHNIN-----PLAGCWPILLQIPVFFAI 443
             +    +  + +  +             + K ++ N     P  GC P+L+Q P+F  +
Sbjct: 102 KILQPQLKIVQDAVKRAKTPEQQMAANNYMRKIYSANGTSMIPSMGCLPMLIQFPIFSGL 161

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           Y+ I+ S E+ HA F+G    +     + I T+   LP+ +   + +   P         
Sbjct: 162 YQAIAYSPEISHATFFG----IQLGHSSFIVTILATLPYIIVSLIMLQGVP--------- 208

Query: 504 QMKMSPPPADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
                       Q   +       P++       + AGL +Y+    +I I+QQA++   
Sbjct: 209 ----------PEQRKAMQATAFLSPIMTFVFCMMYNAGLGLYFGAGGIILIIQQAIVT-- 256

Query: 560 HGAEIGLIDRLRSTFSKNYNSQ 581
           +     +  RL +   +N   +
Sbjct: 257 YIVTPNIRKRLDAEMEENPPVE 278


>gi|324991296|gb|EGC23229.1| SpoIIIJ family protein [Streptococcus sanguinis SK353]
 gi|325687127|gb|EGD29150.1| SpoIIIJ family protein [Streptococcus sanguinis SK72]
 gi|332367395|gb|EGJ45128.1| SpoIIIJ family protein [Streptococcus sanguinis SK1059]
          Length = 307

 Score = 90.8 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391
             W          +  +  N    +G+AI++ T+ V+++        + K  + +  M  
Sbjct: 35  LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
            +P    ++E+ K +  Q      Q+ ++   K + ++     GC P+L+Q+P F A++ 
Sbjct: 95  FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  +  + WIKDLA +D                          I+ +  +IQ 
Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------LALTAIVGILYYIQS 192

Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            +S     D+ Q   +    +M P++ V      PA + +YW     I I+     +  +
Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINY 250

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
                L  ++   F KN   
Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270


>gi|193217059|ref|YP_002000301.1| putative inner membrane protein translocase component YidC
           [Mycoplasma arthritidis 158L3-1]
 gi|193002382|gb|ACF07597.1| preprotein translocase subunit YidC [Mycoplasma arthritidis
           158L3-1]
          Length = 650

 Score = 90.8 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 58/405 (14%), Positives = 132/405 (32%), Gaps = 21/405 (5%)

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237
            +F+I+   T    ++ +  P+ +  +       +  G      A      L  +  ++ 
Sbjct: 248 DIFQILTNETLKYWEEHQNDPKLKWYKEFKDLIASENGTTFLEKATAYFNKLKTKVSANE 307

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
            +       E N     +  Y     I S             +   +  +    N +   
Sbjct: 308 NEDKGLTTSEGNIVANFARSY--RAAIGSYLQLTKHILGSRVENGTQIYSITHINNLGNY 365

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357
              S+ ++ F    +     +   +    +  F  L       F+   +  L +  ++++
Sbjct: 366 SKDSLLSSLFDANSSTPQKALATAKDYWGLGPFYGLFVQPVNLFMNAIITGLGTTGWSVI 425

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE-KFKQSPPQVLQKAMI 416
               + +++  +    + F     Q       +       +  E K  +   Q  Q  + 
Sbjct: 426 LALVVTVIIVRLIAFAVSFKATFSQSRMEEFNQKKAKIEAKYAEYKSDKQMQQRKQLEIA 485

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LYK   I+P +G     + +P+   ++++IS S E++ A ++     +  +  +    +
Sbjct: 486 ELYKKEKISPWSGLISSFITLPILIVVFRIISASPEIKQATWY----SIQLSTSSIRRVI 541

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA-------MILNWMPVVFVF 529
            G L +       VGI  +   +   +  K     A+  Q           N + ++F+ 
Sbjct: 542 AGDLIYLPIIIFSVGIQALAQYMPKILNRKKKSLRANAYQQAALKKENKKFNIISLIFIG 601

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI-------MKMHGAEIGLI 567
               F AGL IYW    + +I+Q   +             E  L 
Sbjct: 602 IGVIFSAGLQIYWIIGGIWTILQHIFVHYFQKTKYFKEKVEPKLF 646


>gi|324507050|gb|ADY42997.1| Inner membrane protein OXA1L [Ascaris suum]
          Length = 379

 Score = 90.8 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 82/246 (33%), Gaps = 40/246 (16%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
              ++  +    M +   +N +       IM  T+ ++L    +        A     + 
Sbjct: 92  LISWWKPSGYFRMALEAMHNHLDLPWWTTIMCATMCLRLAMVFVPIMSQKLVAKQSMYKK 151

Query: 395 KIDELREKFKQSP-------PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF----FAI 443
           ++DE RE+   +         Q +        K+ +I        IL    VF    FAI
Sbjct: 152 ELDEFRERIMDAKKEGNNLLQQQVFLEQRDFLKSKDIRLGRQFLIILANGGVFATQFFAI 211

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
            +++ ++          W  DL   DP                       P+I +++M I
Sbjct: 212 RRMVDVNFPGWATGGALWFTDLTIPDPYY-------------------ALPLISAVTMGI 252

Query: 504 QMKMSPPPADKGQAM-------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             ++          M       +L  +P+      S F +GL +YW  SN IS++    +
Sbjct: 253 VARVGIEMGTSTDQMGPGMRLGMLYGLPLFIFVVSSRFASGLCVYWCTSNFISLI--YAM 310

Query: 557 MKMHGA 562
           +    A
Sbjct: 311 LFKMPA 316


>gi|299538281|ref|ZP_07051566.1| membrane protein oxaA precursor [Lysinibacillus fusiformis ZC1]
 gi|298726483|gb|EFI67073.1| membrane protein oxaA precursor [Lysinibacillus fusiformis ZC1]
          Length = 253

 Score = 90.8 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 99/262 (37%), Gaps = 41/262 (15%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +   +       F   I      F+ +             G++G+AI+  TV ++L+  
Sbjct: 16  VLSGCQAVQNKEGFFYSIFVKPMEFLLEFFGN-----DIFSGSYGLAIIAITVLIRLVLM 70

Query: 377 PLAKKQYVSTANMKNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL- 427
           P+  K Y     MK                ++E   +      Q+ M+ LY+ H INPL 
Sbjct: 71  PIMLKNYRQQQLMKTKMDAFKPEMEAVQKKMKEAKTKEEQTQYQQEMMALYQKHGINPLN 130

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487
            GC P+L+Q+P+   +Y  I  S +++ +  + W   L + D                  
Sbjct: 131 MGCLPMLIQMPIIMGLYFSILYSADVK-SHEFLWFS-LGSPD------------------ 170

Query: 488 MHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWS 543
               +  I+  +   IQ ++S    P   K Q  +     P++ VF   S  A L +YWS
Sbjct: 171 ---IVMTIVAGIVYLIQARVSLWTVPEQQKAQMKMFIYISPIMIVFISMSSMAALPLYWS 227

Query: 544 WSNVISIVQQAVIMKMHGAEIG 565
            S  + I+Q  +  K +     
Sbjct: 228 VSGALLIIQTYIGRKYYSEHPE 249


>gi|125718591|ref|YP_001035724.1| OxaA-like protein precursor [Streptococcus sanguinis SK36]
 gi|125498508|gb|ABN45174.1| Preprotein translocase subunit YidC, putative [Streptococcus
           sanguinis SK36]
          Length = 307

 Score = 90.8 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391
             W          +  +  N    +G+AI++ T+ V+++        + K  + +  M  
Sbjct: 35  LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
            +P    ++E+ K +  Q      Q+ ++   K + ++     GC P+L+Q+P F A++ 
Sbjct: 95  FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  +  + WIKDLA +D                          I+ +  +IQ 
Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------LALTAIVGILYYIQS 192

Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            +S     D+ Q   +    +M P++ V      PA + +YW     I I+     +  +
Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINY 250

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
                L  ++   F KN   
Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270


>gi|332358341|gb|EGJ36167.1| SpoIIIJ family protein [Streptococcus sanguinis SK355]
          Length = 307

 Score = 90.8 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 100/260 (38%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391
             W          +  +  N    +G+AI++ T+ V+++        + K  + +  M  
Sbjct: 35  LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
            +P    ++E+ K +  Q      Q+ ++   K + ++     GC P+L+Q+P F A++ 
Sbjct: 95  FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  +  + WIKDLA +D                         +I+ +  +IQ 
Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------WALTVIVGILYYIQS 192

Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            +S     D+ Q   +    +M P++ V      PA + +YW     I I+     +  +
Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINY 250

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
                L  ++   F KN   
Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270


>gi|327490082|gb|EGF21870.1| SpoIIIJ family protein [Streptococcus sanguinis SK1058]
          Length = 307

 Score = 90.8 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391
             W          +  +  N    +G+AI++ T+ V+++        + K  + +  M  
Sbjct: 35  LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
            +P    ++E+ K +  Q      Q+ ++   K + ++     GC P+L+Q+P F A++ 
Sbjct: 95  FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  +  + WIKDLA +D                          I+ +  +IQ 
Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------LALTAIVGILYYIQS 192

Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            +S     D+ Q   +    +M P++ V      PA + +YW     I I+     +  +
Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINY 250

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
                L  ++   F KN   
Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270


>gi|299822979|ref|ZP_07054865.1| ParB/SpoJ family partitioning protein [Listeria grayi DSM 20601]
 gi|299816508|gb|EFI83746.1| ParB/SpoJ family partitioning protein [Listeria grayi DSM 20601]
          Length = 274

 Score = 90.4 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 84/251 (33%), Gaps = 29/251 (11%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           +   +         ++  +          F        ++    I  ++  + ++     
Sbjct: 24  LDPSQNQDGFFNVYLIKPFASVIKFFASFFDGSYGIAIIITTIIIRAIIMPLNLR-TAKA 82

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQ 436
               Q    A    I      ++    +     +Q+ M  +Y+ ++INPL  GC P+++Q
Sbjct: 83  QMGMQTKMAAAKPEIDDIQARVKRAATKEEQVKIQQEMTLVYQKYDINPLQMGCLPLIIQ 142

Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           +P+  A Y  I  S E+     + W  +L   D                      +  I+
Sbjct: 143 MPILMAFYYAIRGSQEIA-THTFLWF-NLGHPDM---------------------VLAIL 179

Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
             L   +Q  +S       Q   +  M    P + +F   S P+ L +YW+   +    Q
Sbjct: 180 AGLVYLLQYFVSMIGNTPEQKKQMRVMGLISPAMILFISFSAPSALALYWAVGGLFLAGQ 239

Query: 553 QAVIMKMHGAE 563
             +  K++  +
Sbjct: 240 TLLTKKLYMNK 250


>gi|327462013|gb|EGF08342.1| SpoIIIJ family protein [Streptococcus sanguinis SK1057]
          Length = 307

 Score = 90.4 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 98/260 (37%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391
             W          +  +  N    +G+AI++ T+ V+++        + K  + +  M  
Sbjct: 35  LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
            +     ++E+ K +  Q      Q+ ++   K + ++     GC P+L+Q+P F A++ 
Sbjct: 95  FKSIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  +  + WIKDLA +D                          I+ +  +IQ 
Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------LALTAIVGILYYIQS 192

Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            +S     D+ Q   +    +M P++ V      PA + +YW     I I+     +  +
Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINY 250

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
                L  ++   F KN   
Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270


>gi|291484826|dbj|BAI85901.1| OxaA-like protein precursor [Bacillus subtilis subsp. natto
           BEST195]
          Length = 275

 Score = 90.4 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 36/219 (16%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE--------LREKFKQSP 407
             G +G++I+L T+ V+++  PL   Q+      +     I          L++      
Sbjct: 59  FHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRIFQEKMAVIKPQVDSIQVKLKKTKDPEK 118

Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            + LQ  M++LY+ +NINPL  GC P+L+Q P+   +Y  I  + E+     + W   L 
Sbjct: 119 QKELQMEMMKLYQENNINPLAMGCLPMLIQSPIMIGLYYAIRSTPEIASHS-FLWFS-LG 176

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------PPPADKGQ-AMI 519
            +D     +                   I+  +  +I  K+S      P      Q A +
Sbjct: 177 QSDILMSLSAG-----------------IMYFVQAYIAQKLSAKYSAVPQNPAAQQSAKL 219

Query: 520 LNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           + +  PV+      + PA L +YW  S +   VQ  V+ 
Sbjct: 220 MVFIFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNIVLQ 258


>gi|328946838|gb|EGG40975.1| SpoIIIJ family protein [Streptococcus sanguinis SK1087]
 gi|332362242|gb|EGJ40042.1| SpoIIIJ family protein [Streptococcus sanguinis SK1056]
          Length = 307

 Score = 90.4 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391
             W          +  +  N    +G+AI++ T+ V+++        + K  + +  M  
Sbjct: 35  LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
            +P    ++E+ K +  Q      Q+ ++   K + ++     GC P+L+Q+P F A++ 
Sbjct: 95  FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  +  + WIKDLA +D                          I+ +  +IQ 
Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------WALTAIVGILYYIQS 192

Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            +S     D+ Q   +    +M P++ V      PA + +YW     I I+     +  +
Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINY 250

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
                L  ++   F KN   
Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270


>gi|139439861|ref|ZP_01773226.1| Hypothetical protein COLAER_02260 [Collinsella aerofaciens ATCC
           25986]
 gi|133774789|gb|EBA38609.1| Hypothetical protein COLAER_02260 [Collinsella aerofaciens ATCC
           25986]
          Length = 256

 Score = 90.4 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 109/248 (43%), Gaps = 17/248 (6%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            + +I   +F L+        ++G++I++  V ++LL  PL  K   STA M+ +QPK+ 
Sbjct: 1   MWDWIVNILFELLKLIQTFAVDWGLSIIILVVIIRLLLTPLMLKSTKSTARMQVLQPKML 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA- 456
           E++E++    PQ   + M + Y  +  NP+AGC P+L+Q+P+ FA++ ++    +  +  
Sbjct: 61  EIQERYAD-DPQRQAEEMQKFYSENKFNPMAGCLPLLIQMPILFALFTLLRNLPQYFNDG 119

Query: 457 --PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII----MSLSMFIQMKMSPP 510
              F+  + DL      +    F +    L   +   +  +I    MS +   Q   S  
Sbjct: 120 TFSFFNILPDLTTTPSASFADGFMVALPALVCLILFAVLTLIPQLYMSRNQTGQQAQSMR 179

Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
                  +++ WM         S P G+++Y+  S+   ++QQ  + +    +    +  
Sbjct: 180 MMAVVMTVMMLWM-------GWSLPVGVLLYYDVSSAWQVIQQIFVTQKVIDKAKADE-- 230

Query: 571 RSTFSKNY 578
                   
Sbjct: 231 EERLKNAP 238


>gi|282865068|ref|ZP_06274121.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE]
 gi|282559991|gb|EFB65540.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE]
          Length = 263

 Score = 90.4 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 32/251 (12%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           M      F  +   +  L+  F+    +   AI+L T  V+L   PL++           
Sbjct: 1   MSAFMSAFASLVGSLADLLQPFFQ-TASTAAAIILFTALVRLAVHPLSRAAARGQKARTK 59

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +QP+I  LREK  ++P   +QKA+++L+    ++P +GC P LLQ+P FF +Y  +  S 
Sbjct: 60  LQPQIAALREKHAKNPE-RMQKALMELHAAEKVSPFSGCLPSLLQMPAFFLLYH-LFSSG 117

Query: 452 EMRHAPFWGWIKD-LAAA------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF-- 502
            +   P      D L A       D      LFG       G +++G++ ++ +++ F  
Sbjct: 118 SIGGTPNSLLSHDLLGAPLGERWHDALAHGGLFG-----QAGLVYLGLFAVVAAVATFNY 172

Query: 503 ----IQMKMSPPPAD--------KGQAMILNWMPVVFVFALSS---FPAGLIIYWSWSNV 547
                QM  +P             G   +   MP++    L S    P    +Y   S  
Sbjct: 173 GRTKRQMAANPMTPAAGPDGQPVPGMGAMTKVMPLMSFLTLFSVAVVPLAAALYLVTSTT 232

Query: 548 ISIVQQAVIMK 558
            + +++A + +
Sbjct: 233 WTAIERAYLYR 243


>gi|281491036|ref|YP_003353016.1| OxaA/YidC family membrane protein [Lactococcus lactis subsp. lactis
           KF147]
 gi|38503174|sp|Q9CHZ9|OXAA2_LACLA RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|281374794|gb|ADA64314.1| Membrane protein, OxaA/YidC family [Lactococcus lactis subsp.
           lactis KF147]
 gi|326406070|gb|ADZ63141.1| OxaA/YidC family membrane protein [Lactococcus lactis subsp. lactis
           CV56]
          Length = 320

 Score = 90.4 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 95/276 (34%), Gaps = 39/276 (14%)

Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--- 375
            H    + +P         + + +      +  +  NL   +G  I+  T+ ++ L    
Sbjct: 27  THVVDGVRVPTEAATHGITYNFLVRPMSAFVDLFANNLHMGYGWGIIFVTLIIRFLILPL 86

Query: 376 -----FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--A 428
                +     Q           P  + L++          Q+A++   K + IN L   
Sbjct: 87  GLNQAYKSTYMQEKMAYLAPVFAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSI 146

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           GC P+L+Q P F A+Y   + +  +  + F+G                   +P   P   
Sbjct: 147 GCLPMLIQWPFFIALYNAAAYTTGISSSTFYG-------------------IPLGHPSV- 186

Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWM-PVVFVFALSSFPAGLIIYWSW 544
              +  II  +  FIQ  +S       Q      +  M P + V      PAG+ +YW+ 
Sbjct: 187 ---VLVIISGVLYFIQTWISTLSMTPEQKKSGMAMLIMSPAMIVVFSFMSPAGVALYWAV 243

Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
              + ++    I+     +  +  R+   F+KN   
Sbjct: 244 GGFVIVI--QQIIITFIMKPRMRRRIDEEFTKNPPK 277


>gi|325291449|ref|YP_004267630.1| membrane protein insertase, YidC/Oxa1 family [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966850|gb|ADY57629.1| membrane protein insertase, YidC/Oxa1 family [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 230

 Score = 90.0 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 24/210 (11%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           +  +G+AI+L T+ +K++ FPL  KQ  S   M  + P I ++++K+ +   +   + ++
Sbjct: 24  LPYYGVAIILFTIIIKIILFPLTYKQTASMRKMMELTPMITDIQKKYAKDKVKA-NQKVM 82

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
           +LY     NP  GC P+L+Q+P+ +A YK + I      A       +L           
Sbjct: 83  ELYAKEKANPYMGCLPLLIQMPILWAFYKALMIFPYGNEASAMFLGFNLTVK-------- 134

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---------SPPPADKGQAMILNWMPVVF 527
                 Y     +  I PI   LS ++  K           P  A + Q ++L  MP   
Sbjct: 135 ------YGFTPDYHLILPIAAGLSTYLMSKTTSSSTVSASQPESAKQTQKIMLIVMPFFL 188

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            +  +S P+GL IY    N++S +Q   I 
Sbjct: 189 AYITASVPSGLGIYIITMNIVSAIQTLYIN 218


>gi|332654814|ref|ZP_08420556.1| inner membrane protein OxaA [Ruminococcaceae bacterium D16]
 gi|332516157|gb|EGJ45765.1| inner membrane protein OxaA [Ruminococcaceae bacterium D16]
          Length = 401

 Score = 90.0 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 61/277 (22%), Positives = 108/277 (38%), Gaps = 61/277 (22%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              I KP   L+ +FYN   ++GIA++L  + VKL+ FPL+ K   S   M  +  K+ +
Sbjct: 1   MGIILKPFAWLLLFFYNFFSSYGIALILFALVVKLILFPLSLKGKKSMIKMNLLSGKMQQ 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL------- 451
           L+ K      +  Q  + +LY+   +NP+ GC    L + +   +Y +I   L       
Sbjct: 61  LQ-KQYGKDRERYQMEVQKLYEREKVNPMGGCLWSFLPLFILIPLYYIIREPLTYLMDVP 119

Query: 452 --------EMRHAPFWGWIKDLAAADPTNI----------------------FTLFGILP 481
                   E+      G    +A A+  N                       F   GI  
Sbjct: 120 KDAIAKIAEITGIANTGAYPQIAMAEALNKDGMLAQVQAALGDAGNGLFNLDFHFLGINL 179

Query: 482 FYLPGF-----------MHVGIWPIIMSL----SMFIQMKMSPPPADKGQ--------AM 518
             +P +           + + + P++  +    SM I +K +    ++ Q          
Sbjct: 180 ADIPQWNFWANGLSWESIGLFLLPLVSVVMSLLSMQISLKTNQMSRNQAQDEATAKTNRT 239

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           ++  MP++ ++   + PAGL IYW      SI Q+ +
Sbjct: 240 MMIMMPLMSLWIGFTVPAGLSIYWIAQYFFSIFQELI 276


>gi|15672551|ref|NP_266725.1| OxaA-like protein precursor [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12723459|gb|AAK04667.1|AE006291_1 conserved hypothetical protein [Lactococcus lactis subsp. lactis
           Il1403]
          Length = 307

 Score = 90.0 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 95/276 (34%), Gaps = 39/276 (14%)

Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--- 375
            H    + +P         + + +      +  +  NL   +G  I+  T+ ++ L    
Sbjct: 14  THVVDGVRVPTEAATHGITYNFLVRPMSAFVDLFANNLHMGYGWGIIFVTLIIRFLILPL 73

Query: 376 -----FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--A 428
                +     Q           P  + L++          Q+A++   K + IN L   
Sbjct: 74  GLNQAYKSTYMQEKMAYLAPVFAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSI 133

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           GC P+L+Q P F A+Y   + +  +  + F+G                   +P   P   
Sbjct: 134 GCLPMLIQWPFFIALYNAAAYTTGISSSTFYG-------------------IPLGHPSV- 173

Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWM-PVVFVFALSSFPAGLIIYWSW 544
              +  II  +  FIQ  +S       Q      +  M P + V      PAG+ +YW+ 
Sbjct: 174 ---VLVIISGVLYFIQTWISTLSMTPEQKKSGMAMLIMSPAMIVVFSFMSPAGVALYWAV 230

Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
              + ++    I+     +  +  R+   F+KN   
Sbjct: 231 GGFVIVI--QQIIITFIMKPRMRRRIDEEFTKNPPK 264


>gi|25029500|ref|NP_739554.1| putative inner membrane protein translocase component YidC
           [Corynebacterium efficiens YS-314]
 gi|259508318|ref|ZP_05751218.1| membrane protein OxaA [Corynebacterium efficiens YS-314]
 gi|23494789|dbj|BAC19754.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259164136|gb|EEW48690.1| membrane protein OxaA [Corynebacterium efficiens YS-314]
          Length = 316

 Score = 90.0 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 60/304 (19%), Positives = 116/304 (38%), Gaps = 61/304 (20%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++ +++ +            + ++IM  T  V+++          S   
Sbjct: 1   MLNFIYWPISAILWFWHQVFSLVLSPDEGITWALSIMFLTFTVRVVLVKPMVNTMRSQRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447
           M+++ P++ E+REK+K    Q +     +L K   +NP+AGC P+L+QIPVF  ++ V+ 
Sbjct: 61  MQDMAPRMQEIREKYKN-DQQKMMAESRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLR 119

Query: 448 -------------SISLEMRHAPFW--------------GWIKDLAAA--DPTNIFTLFG 478
                            E R+ P +               +   L+A    P   F  F 
Sbjct: 120 SFNRTGEGIGQLGMSIEENRNTPNYIFDVEHVQSFLAADLFGAPLSAYITMPEEAFAAFD 179

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--------------------- 517
                L   +      +I+ ++  +  ++S    ++ +                      
Sbjct: 180 FDVSRLNIALVAAPMILIIVVATHMNARLSVNRQEERKRSGKQVAPANDQMAMQMQMMNK 239

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           M+L +MP+  +F    +  GL+IY   +NV +  QQ  I     AE    D L+    ++
Sbjct: 240 MMLWFMPLTILFTGFIWTIGLLIYMMSNNVWTFFQQRYIFAKMDAEEAAEDELKKAAKRS 299

Query: 578 YNSQ 581
              +
Sbjct: 300 TAPK 303


>gi|169829751|ref|YP_001699909.1| membrane protein oxaA [Lysinibacillus sphaericus C3-41]
 gi|168994239|gb|ACA41779.1| Membrane protein oxaA precursor [Lysinibacillus sphaericus C3-41]
          Length = 252

 Score = 90.0 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 38/244 (15%)

Query: 337 GWFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            ++    KPM  L+ +F N    G++G+AI+  TV ++L+  P+  K Y     MK    
Sbjct: 29  IFYSIFVKPMEFLLEFFGNDIFAGSYGLAIIAITVLIRLVLMPIMLKNYRQQQLMKTKMD 88

Query: 395 KIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445
                       ++E   +      Q+ M+ LY+ H INPL  GC P+L+Q+P+   +Y 
Sbjct: 89  AFKPEMEAVQKKMKEAKTKEEQTQYQQEMMALYQKHGINPLNMGCLPMLIQMPIIMGLYF 148

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
            I  S +++ +  + W   L + D                      +  I+  +   +Q 
Sbjct: 149 SILYSTDVK-SHEFLWFS-LGSPD---------------------IVMTIVAGVVYLVQA 185

Query: 506 KMSP---PPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           ++S    P   K Q  +     P++ VF   S  A L +YWS S  + I+Q  +  K + 
Sbjct: 186 RVSLWTVPEQQKAQMKMFIYISPIMIVFISMSSMAALPLYWSVSGALLILQTYIGRKYYS 245

Query: 562 AEIG 565
               
Sbjct: 246 QHPE 249


>gi|116618818|ref|YP_819189.1| preprotein translocase subunit YidC [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
 gi|116097665|gb|ABJ62816.1| Preprotein translocase subunit YidC [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 307

 Score = 90.0 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 95/268 (35%), Gaps = 43/268 (16%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNL---VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
                   + +I +P+  LM+   +    V   G AI++ T   +L+  P    Q V+T 
Sbjct: 23  GYNQHSRMYRWIGQPLAELMTNIAHFIGGVNGIGWAIIVITAIFRLILLPFFLNQQVNTT 82

Query: 388 NMKNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQI 437
             +    K+           R+       Q    AM+ LY+ ++++ + G     + +Q+
Sbjct: 83  VNQIKMQKLKPEIDKLQTLSRKAATTEEQQKASMAMMSLYRENDVSVIGGISFLTMAMQL 142

Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
           P+F  +Y  I  +  ++ A F G+  DL                          ++ I+ 
Sbjct: 143 PIFSGLYSAILHAPALQGASFLGF--DLGKP---------------------QLVFAIVA 179

Query: 498 SLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            +   IQ  +      + Q      ++   P++           + +Y+    + +++Q 
Sbjct: 180 GIIYLIQAWLMMQHMPEEQRKTSAAMMFVSPIMIFVFAMIASGAIGLYFVIGGIFALIQT 239

Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            +    H    GL  R+ + F     + 
Sbjct: 240 LI---QHYQRPGLEKRVTAEFKIQKTAD 264


>gi|171693303|ref|XP_001911576.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946600|emb|CAP73402.1| unnamed protein product [Podospora anserina S mat+]
          Length = 452

 Score = 90.0 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 83/266 (31%), Gaps = 46/266 (17%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTA 387
            F   +   + +     M  ++ + Y   G    A I L ++ ++ +             
Sbjct: 117 GFLKNLGLDYGFGPTALMEWILEHTYIYTGLPWWASIGLVSLAIRAVLVKPMFTAAEMAQ 176

Query: 388 NMKNIQ---PKIDELREKFKQSPPQVLQKAMI--------QLYKTHNINPLAGCWPILLQ 436
            +++++         +E           +  +         + +      L    P L+Q
Sbjct: 177 KLQDLKRDPKYEQLEKEVMSAFQGGQADQYAMLDKRNKMKAMRRAVGYKMLPASVPALVQ 236

Query: 437 IPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IPV F ++++I    ++           W  DL  +DP                     I
Sbjct: 237 IPVGFGMFRLIRGMADLPVPSMETGGALWFNDLTVSDPLF-------------------I 277

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-----PVVFVFALSSFPAGLIIYWSWSNV 547
            PI+ +  M   M++  P     Q   +  M     P+         PAGL +Y++ S  
Sbjct: 278 LPIVGAGLMIASMRVPLPYMASSQQGTMKIMTMVAAPITLGV-SIFLPAGLQLYFAISTF 336

Query: 548 ISIVQQAVIM-----KMHGAEIGLID 568
           +   QQ +       KM G    +  
Sbjct: 337 LQFGQQWLTYQNWFRKMIGLRPVVFG 362


>gi|307709736|ref|ZP_07646187.1| membrane protein oxaA 1 [Streptococcus mitis SK564]
 gi|307619438|gb|EFN98563.1| membrane protein oxaA 1 [Streptococcus mitis SK564]
          Length = 308

 Score = 89.7 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 73/212 (34%), Gaps = 30/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           ILLQ+P F AIY     +  +  A + G    L +     +    G+L +        G+
Sbjct: 143 ILLQMPFFSAIYFAAQYTEGVAQASYLG--IPLGSP-SMILAACAGVLYYLQSLLSLHGV 199

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
                               D+ Q      +    PV+        PA + +YW     +
Sbjct: 200 -------------------EDETQRDQIKKMAYVSPVMIAGFSLISPASVTLYWVVGGFM 240

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            I+QQ ++   +     L  ++R   +KN   
Sbjct: 241 MILQQFIVN--YIVRPKLRKKVREELAKNPPK 270


>gi|213581272|ref|ZP_03363098.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-0664]
          Length = 215

 Score = 89.7 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 64/211 (30%), Gaps = 18/211 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH 205
              Y   +  +V N     +  S  G++ + 
Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQS 199


>gi|212715145|ref|ZP_03323273.1| hypothetical protein BIFCAT_00031 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661826|gb|EEB22401.1| hypothetical protein BIFCAT_00031 [Bifidobacterium catenulatum DSM
           16992]
          Length = 344

 Score = 89.7 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 106/270 (39%), Gaps = 31/270 (11%)

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372
           +    +              +             F++M     +  ++ ++I+   + V+
Sbjct: 3   QNQFLLDSGFWGWLYKLLYPVEWLMTQIMAVFHKFLVMLGMNEIGFSWVMSIVFLVLVVQ 62

Query: 373 LLFFPLAKKQYVSTANMK--------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424
              FPL  K       M+         +Q   ++ + K   +  + +Q+ M++LY+ ++ 
Sbjct: 63  ACVFPLFYKSMKGMRKMQAQMAVLQPKMQRIQNKYKGKNDPASKEAMQREMMKLYQDNDA 122

Query: 425 NPLAGC---WPILLQIPVFFAIYKVISISLEM-RHA---PFWGWIKDLAAADPTNIFTLF 477
           NP+ GC    P+ +Q PVF  ++  +S    + R            D+A A      T+F
Sbjct: 123 NPMGGCTSMLPMFVQGPVFMCMFYTLSAIPYIARGKFRDGQGLGAFDIATAKQFTSTTVF 182

Query: 478 GILPFY------LPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW 522
           G+          + G + + I+  +M   ++       K +          +    ++ W
Sbjct: 183 GVNVADNFTTAAVHGKVVIAIFVALMCFCLWFMQYNSMKRNMAQSAANKQTEMMQKMMLW 242

Query: 523 M-PVVFVFALSSFPAGLIIYWSWSNVISIV 551
           M P++++F+  + P  +++YW  +N+ +++
Sbjct: 243 MFPIMYIFSGIAMPFAVLVYWLTNNICNLL 272


>gi|255537783|ref|XP_002509958.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis]
 gi|223549857|gb|EEF51345.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis]
          Length = 421

 Score = 89.7 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 88/231 (38%), Gaps = 37/231 (16%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
             F  +A    ++ +       N+  +I+LTT+ ++ +  PL   Q  +T+ +  ++P++
Sbjct: 134 DCFAPVAVLQHVIDAVHNLTGFNWWASIVLTTLIIRTMMVPLMINQLKATSKLTLMRPRL 193

Query: 397 DELREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +E++++   +           K M  L+K +  +P      I +Q PVF   +  I    
Sbjct: 194 EEIKQQMDNTAMDPAAIAEGNKRMKMLFKEYGASPFTPMKGIFVQGPVFVCFFLAIRNMA 253

Query: 452 EMRHAPFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
           E    P +      W  DL+  D   IF                   P++ +L+ +I ++
Sbjct: 254 E--KVPSFKNGGAFWFVDLSTPDSLYIF-------------------PVLTALTFWITVE 292

Query: 507 MSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++        P       I      + V     FP  +  YW  +N+ S  
Sbjct: 293 LNMQEGLEGNPVAGTMKNISRVFAALTVPLTMGFPKAIFCYWVTTNLFSFA 343


>gi|307705543|ref|ZP_07642395.1| membrane protein oxaA 1 [Streptococcus mitis SK597]
 gi|307620820|gb|EFN99904.1| membrane protein oxaA 1 [Streptococcus mitis SK597]
          Length = 308

 Score = 89.7 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 73/212 (34%), Gaps = 30/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           ILLQ+P F AIY     +  +  A + G    L +     +    G+L +        G+
Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG--IPLGSP-SMILAACAGVLYYLQSLLSLHGV 199

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
                               D+ Q      +    PV+        PA + +YW     +
Sbjct: 200 -------------------EDETQRDQIKKMAYVSPVMIAGFSLISPASVTLYWVVGGFM 240

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            I+QQ ++   +     L  ++R   +KN   
Sbjct: 241 MILQQFIVN--YIVRPKLRKKVREELAKNPPK 270


>gi|255579269|ref|XP_002530480.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis]
 gi|223529977|gb|EEF31903.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis]
          Length = 423

 Score = 89.7 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 91/231 (39%), Gaps = 37/231 (16%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
             F  +A    ++ +       N+  +I+LTT+ ++ L  PL   Q  +T+ +  ++P++
Sbjct: 136 DCFPPVAVLHHIIDAVHNLTGFNWWASIVLTTLVIRTLMVPLMINQLKATSKLTLMRPRL 195

Query: 397 DELREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +E++++ + +           K M  L+K + ++P      + +Q PVF   +  I    
Sbjct: 196 EEIKQQMQDTGMDPATIAEGNKQMKMLFKEYGVSPFTPMKGLFIQGPVFVCFFLAIRNMA 255

Query: 452 EMRHAPFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
           E  + P +      W  DL+  D   IF                   P++ +L+ +I ++
Sbjct: 256 E--NVPSFKNGGAFWFVDLSTPDSLYIF-------------------PVLTALTFWITIE 294

Query: 507 MSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++        P       I      + V     FP  +  YW  +N+ S  
Sbjct: 295 LNMQEGLEGNPVAGTMKNISRVFAALTVPLTMGFPKAIFCYWVTTNLFSFA 345


>gi|307198512|gb|EFN79417.1| Mitochondrial inner membrane protein OXA1L [Harpegnathos saltator]
          Length = 275

 Score = 89.7 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 86/216 (39%), Gaps = 34/216 (15%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-------KQSPP 408
               +   I++ TV ++ L FPL      + A   N  P I E+++K             
Sbjct: 5   YDIPWWTTIVIGTVILRTLIFPLVVITQKNMAKFTNHMPVIQEIQQKMTKARHIGDHFES 64

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKD 464
                 +++  K HN+         L+Q P+F     A+ K+ ++ +E      + W++D
Sbjct: 65  ARYASELMEYMKKHNVKIGRNFLIPLVQAPIFISCFLALRKMANLPVESLKQGGFWWMQD 124

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD----KGQAMIL 520
           L   DP                     I PI+  ++M+I +++               + 
Sbjct: 125 LTIHDPYY-------------------IMPIVTCVTMYITIEIGADGTHLKSLGVMRYVF 165

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             +P   +  + +FP  ++ YW+ +N +S++Q +++
Sbjct: 166 RIVPFAILPFILNFPGAILTYWASTNFMSLIQTSLL 201


>gi|126651503|ref|ZP_01723707.1| hypothetical protein BB14905_07464 [Bacillus sp. B14905]
 gi|126591756|gb|EAZ85852.1| hypothetical protein BB14905_07464 [Bacillus sp. B14905]
          Length = 252

 Score = 89.7 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 56/262 (21%), Positives = 99/262 (37%), Gaps = 41/262 (15%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            +   +       F   I      F+ +             G++G+AI+  TV ++L+  
Sbjct: 16  VLSGCQAVQNKEGFFYSIFVKPMEFLLEFFGN-----NIFAGSYGLAIIAITVLIRLVLM 70

Query: 377 PLAKKQYVSTANMKNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL- 427
           P+  K Y     MK                ++E   +      Q+ M+ LY+ H INPL 
Sbjct: 71  PIMLKNYRQQQLMKTKMDAFKPEMEAVQKKMKEAKTKEEQTQYQQEMMALYQKHGINPLN 130

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487
            GC P+L+Q+P+   +Y  I  S +++ +  + W   L + D                  
Sbjct: 131 MGCLPMLIQMPIIMGLYFSILYSTDVK-SHEFLWFS-LGSPD------------------ 170

Query: 488 MHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWS 543
               +  I+  +   +Q ++S    P   K Q  +     P++ VF   S  A L +YWS
Sbjct: 171 ---IVMTIVAGIVYLVQARVSLWTVPEQQKAQMKMFIYISPIMIVFISMSSMAALPLYWS 227

Query: 544 WSNVISIVQQAVIMKMHGAEIG 565
            S  + I+Q  +  K +     
Sbjct: 228 VSGALLILQTYIGRKYYSQHPE 249


>gi|255029969|ref|ZP_05301920.1| OxaA-like protein precursor [Listeria monocytogenes LO28]
          Length = 249

 Score = 89.3 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 93/233 (39%), Gaps = 36/233 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393
            Y I      +M     + GN+GIAI++TT+ ++ L  PL  +   +   M++       
Sbjct: 36  TYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95

Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449
                   L+    +     +QK M+ +Y  +NINP+  GC P+L+Q+P+  A Y  I  
Sbjct: 96  EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S E+  +  + W  +L + D                      +  II  L    Q  +S 
Sbjct: 156 SSEIA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192

Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                 Q   +  +    P++ +F   + P+ L +YW+   +    Q  +  K
Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKK 245


>gi|326693242|ref|ZP_08230247.1| integral membrane protein [Leuconostoc argentinum KCTC 3773]
          Length = 304

 Score = 89.3 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 101/264 (38%), Gaps = 35/264 (13%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNL---VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
                   + +I +P+  +M+   ++   V   G AI++ T  ++L+  P    Q V+T 
Sbjct: 23  GYSQHSRMYRWIGQPLADIMANIAHVIGGVNGIGWAIIIITAILRLILLPFFLNQQVNTT 82

Query: 388 NMKNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQI 437
             +    K+           R+    +  Q    AM+ LY+ ++++ + G     + +Q+
Sbjct: 83  INQIKMQKLKPEIDKLQAISRKAGTSAEQQQASMAMMSLYRENDVSVIGGISFLTLAMQL 142

Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
           PVF  +Y  I  +  ++ A F+G    L+   P  IF +   + + +  ++ V       
Sbjct: 143 PVFSGLYAAILHAPALKGATFFG----LSLGQPQLIFAIAAGVVYLVQAWIAVL------ 192

Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
                      P    K  A ++   P++           + +Y+    + +++Q  ++ 
Sbjct: 193 ---------RMPEEQKKASATMMLISPIMIFVFAMIASGAIGLYFIVGGLFALLQSLIL- 242

Query: 558 KMHGAEIGLIDRLRSTFSKNYNSQ 581
             H    GL  R+   F     + 
Sbjct: 243 --HFQRPGLEKRVAREFKIKKTAD 264


>gi|329314775|gb|AEB89188.1| Membrane protein oxaA [Staphylococcus aureus subsp. aureus T0131]
          Length = 284

 Score = 89.3 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 101/252 (40%), Gaps = 35/252 (13%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           ++     PM  ++ +  N  L  N+G+AI++  + ++++  P     Y ++  M+     
Sbjct: 32  FYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKV 91

Query: 396 IDELREKFKQ--------SPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIY 444
                EK ++               + ++Q+YK +++NP   + GC P+L+Q+P+   +Y
Sbjct: 92  AKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLY 151

Query: 445 KVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   +   +   P + W  DL   D                      I  ++  +  +
Sbjct: 152 FVLKDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAGVLYFIQAY 193

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMH 560
           +  K  P    +   M++   P++ ++   S  + L +YWS S    +VQ     I    
Sbjct: 194 VSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEK 253

Query: 561 GAEIGLIDRLRS 572
            A+  +   + +
Sbjct: 254 VAKKEVQPFIEA 265


>gi|225386358|ref|ZP_03756122.1| hypothetical protein CLOSTASPAR_00102 [Clostridium asparagiforme
           DSM 15981]
 gi|225047540|gb|EEG57786.1| hypothetical protein CLOSTASPAR_00102 [Clostridium asparagiforme
           DSM 15981]
          Length = 412

 Score = 89.3 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 13/127 (10%)

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIW--PIIMSLSMFIQMKMSPPPADKGQ------AM 518
           A  P  +   F         F  +     P++   S +   K+        Q      A 
Sbjct: 209 AYTPMQVIGNFFSHVDGTTVFALIAALAIPLLAGASQWYSSKLMMATTQSPQGDENPGAN 268

Query: 519 ILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574
           ++      MP++ VF   +F  G+ +YW   +V +I+QQ  I   +  ++ + D ++   
Sbjct: 269 MMKSMNVMMPLMSVFFCFTFATGIGLYWVAQSVFTIIQQVGIN-SYLKKVDIDDLVQKNV 327

Query: 575 SKNYNSQ 581
            K    +
Sbjct: 328 EKTNKKR 334



 Score = 52.3 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 5/105 (4%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           + N G+ I+L T+  KLL  PL  KQ  S+  M  +QP++  +++K+K          M+
Sbjct: 13  IVNIGLCIILFTLVTKLLMIPLTIKQQKSSKLMAVMQPELTAIQKKYKGKEGDQKAMMMM 72

Query: 417 -----QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
                 +Y+ +  +   GC P+L+Q+P+ FA+Y+VI       H+
Sbjct: 73  QTETKAVYEKYGTSMTGGCLPMLIQLPIIFALYRVIYNIPAYVHS 117


>gi|325690943|gb|EGD32943.1| SpoIIIJ family protein [Streptococcus sanguinis SK115]
          Length = 307

 Score = 89.3 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391
             W          +  +  N    +G+AI++ T+ V+++        + K  + +  M  
Sbjct: 35  LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
            +P    ++E+ K +  Q      Q+ ++   K + ++     GC P+L+Q+P F A++ 
Sbjct: 95  FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  +  + WIKDLA +D                          I+ +  +IQ 
Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------LALTAIVGILYYIQS 192

Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            +S     D+ Q   +    +M P++ V      PA + +YW     I I+     +  +
Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINY 250

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
                L  ++   F KN   
Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270


>gi|225020858|ref|ZP_03710050.1| hypothetical protein CORMATOL_00866 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305681586|ref|ZP_07404392.1| membrane protein insertase, YidC/Oxa1 family [Corynebacterium
           matruchotii ATCC 14266]
 gi|224946340|gb|EEG27549.1| hypothetical protein CORMATOL_00866 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305658746|gb|EFM48247.1| membrane protein insertase, YidC/Oxa1 family [Corynebacterium
           matruchotii ATCC 14266]
          Length = 319

 Score = 89.3 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 58/301 (19%), Positives = 108/301 (35%), Gaps = 58/301 (19%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           + Y+    +  L     + V N      + +AI+L T  V++L       Q  S   M+ 
Sbjct: 4   FVYWPISVILWLWHKALSFVLNPDSGLTWVLAIVLLTFTVRILLVRPTINQMRSMRKMQE 63

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--- 448
           IQP++ E+R K+K    Q + +   +L K    NPLAGC PIL+Q+PVF  +Y V+    
Sbjct: 64  IQPQMQEIRNKYKN-DQQKMMQETQKLQKEMGFNPLAGCLPILVQMPVFLGLYHVLRSFN 122

Query: 449 -----------ISLEMRHAPFWGWIKD------------------LAAADPTNIFTLFGI 479
                         + R  P + +  +                  ++  +          
Sbjct: 123 RTGTGAGQLGLTPEQNRMTPNYFFSAEDVQSFLDARLFKVPLSAYISMPESMYQAFPGDF 182

Query: 480 LPFYLPGFMHVGIWPIIMSLSM------------FIQMKMSPPPADKGQA-------MIL 520
               +       +  I++++ M                K  P   D+ Q        M+L
Sbjct: 183 TKTNIIMLAAPLVVIIVVAIHMNARLSVDRQKARIASGKQKPAANDQMQMQADMMNKMML 242

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            ++P   +   + +  GL+ Y   +NV +  QQ  + K+   E     + +    +    
Sbjct: 243 WFLPGTILLTCTFWHIGLLFYMVSNNVWTFFQQRWVFKLMDTEEEAELQAKKDAKRASAP 302

Query: 581 Q 581
           +
Sbjct: 303 K 303


>gi|324993653|gb|EGC25572.1| SpoIIIJ family protein [Streptococcus sanguinis SK405]
 gi|324995035|gb|EGC26948.1| SpoIIIJ family protein [Streptococcus sanguinis SK678]
 gi|327462922|gb|EGF09243.1| SpoIIIJ family protein [Streptococcus sanguinis SK1]
 gi|327474526|gb|EGF19931.1| SpoIIIJ family protein [Streptococcus sanguinis SK408]
          Length = 307

 Score = 89.3 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391
             W          +  +  N    +G+AI++ T+ V+++        + K  + +  M  
Sbjct: 35  LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
            +P    ++E+ K +  Q      Q+ ++   K + ++     GC P+L+Q+P F A++ 
Sbjct: 95  FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  +  + WIKDLA +D                          I+ +  +IQ 
Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------LALTAIVGILYYIQS 192

Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            +S     D+ Q   +    +M P++ V      PA + +YW     I I+     +  +
Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINY 250

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
                L  ++   F KN   
Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270


>gi|282881780|ref|ZP_06290438.1| membrane protein OxaA [Peptoniphilus lacrimalis 315-B]
 gi|281298390|gb|EFA90828.1| membrane protein OxaA [Peptoniphilus lacrimalis 315-B]
          Length = 244

 Score = 89.3 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 20/244 (8%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            +  ++   +  ++      +  + ++I++TT+ +K+L  PL   Q  +   M  +QP+I
Sbjct: 11  IFIRYVYNLIAQIIPNEPTNISYYALSIIITTLILKILVLPLTISQMKNQKKMAELQPEI 70

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
            ++++K+K   PQ L     QLYK+ N N L+GC P+++Q+ V    Y+           
Sbjct: 71  AKIQKKYKN-DPQTLAMKQRQLYKSANYNVLSGCLPMIVQLLVLVGFYRCFYKP-----Q 124

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPAD 513
            +       + A               L       I P + +++ F    +   SP    
Sbjct: 125 TYIF-----SQAGFYQAMNKNFFYISNLGVADKTMILPALAAITTFFTSYLATKSPAAGA 179

Query: 514 ------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
                      ++  MP++  F   +  A L+IYW+ SN+ +IVQQ V+       +   
Sbjct: 180 GQDQAKSMMNSMMVAMPIMIFFMGRTLQAELVIYWTVSNIFAIVQQLVVNNFVKKSVEES 239

Query: 568 DRLR 571
           + LR
Sbjct: 240 NELR 243


>gi|313678196|ref|YP_004055936.1| membrane protein [Mycoplasma bovis PG45]
 gi|312950783|gb|ADR25378.1| putative membrane protein [Mycoplasma bovis PG45]
          Length = 721

 Score = 88.9 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 68/496 (13%), Positives = 156/496 (31%), Gaps = 57/496 (11%)

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
                +  ++P++TK     +       N+          N                   
Sbjct: 222 DKDKNIFKINPNSTKLINEGKFISNLDVNSNNDKKKKNDKNAFIYDKELSYQTFANRNNF 281

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
                F R I              ++ S    +   +          + +  G  + F+ 
Sbjct: 282 TGFAKFRRDIF----ETLATNTFYSDKSKYYKKALSQVEKTLKNENYSADFNGFNKYFVD 337

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
            + +K   E +++     ++  ++++ +       + A   I   + S   +   LS+ +
Sbjct: 338 KIKNKKSNELEFAPNVFYALKYYNKALNKYANELNFSALNQISPVKNSVIEEINSLSNDY 397

Query: 283 ARYQAKFSANEITILP-----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337
            +   K S     +        + +  ++ L A A       +    + IP         
Sbjct: 398 NKINDKNSKEATDLRKKITTLNEQLRNSSRLLAPAPYSSMTINLNDAVKIPYAGDEPQRV 457

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF-----------------VKLLFFPLAK 380
            + +                  +  A + T++                  ++     +  
Sbjct: 458 IYNWADAWKLGPFYGLLVFPTAWLSAHLSTSLSHLGGWGTIIVILVLTIILRSAMLAITF 517

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQ-----KAMIQLYKTHNINPLAGCWPILL 435
           KQ V+ +  + ++ K  ++  K+ +            + + +LYK H INP      +L+
Sbjct: 518 KQTVNQSKQEELKSKKAKIDAKYAEFKNNKQMKARQQQEVAELYKKHGINPFDAFVTMLI 577

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
            +P+F  +++VI    E +   + G      +   T+   LF    +   G +   +  I
Sbjct: 578 SLPIFIMMWRVIQSLPEFKSTVWLG-----ISFAETSWRRLFFSGEWQYLGVLL--VVAI 630

Query: 496 IMSLSMFIQMKMSPPP---------------ADKGQAMILNWMPVVFVFALSSFPAGLII 540
           +  ++ F+   ++                  A++ Q      M +VF F    F AGL +
Sbjct: 631 VQGVAQFLPQILNRKKFKERTSLEEEKALKKANRTQR----IMTIVFFFVTLIFSAGLQV 686

Query: 541 YWSWSNVISIVQQAVI 556
           YW  S + +I+Q   I
Sbjct: 687 YWIISGLWTIIQTLSI 702


>gi|260579557|ref|ZP_05847428.1| preprotein translocase YidC subunit [Corynebacterium jeikeium ATCC
           43734]
 gi|258602328|gb|EEW15634.1| preprotein translocase YidC subunit [Corynebacterium jeikeium ATCC
           43734]
          Length = 324

 Score = 88.9 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 63/309 (20%), Positives = 117/309 (37%), Gaps = 67/309 (21%)

Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
             FI  P+  ++ +++ L            + +AIM     +++L       Q  S+  M
Sbjct: 1   MDFIYYPVSGVLWFWHKLFSYVLSPDSGITWALAIMFLVFTIRILLVKPMANQLRSSRKM 60

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-- 447
           + +QPK+ EL+ K+K    Q L   M +L K   +NPLA C P+L+Q+P+F  ++ V+  
Sbjct: 61  QEMQPKMQELQRKYKN-DRQTLAVEMRKLQKEMGVNPLASCLPMLVQMPIFLGLFHVLRS 119

Query: 448 ------------SISLEMRHAPFWGWI--------------KDLA---AADP--TNIFTL 476
                           E R+ P + +                 L+   + DP     F+ 
Sbjct: 120 FNRTGTGVGQLGMTVEETRNTPNYFFGVHEVQSFLDARIFGTPLSGFISMDPNNYRAFSA 179

Query: 477 FGILPFYLPGFMHVGI-WPIIMSLSMFIQMKMSPPPA------DKGQAM----------- 518
            G + F     + V +   ++ S+ M    +MS   A      +  +A            
Sbjct: 180 DGHVDFTRTNIILVVVPMMLVASVLMHFSARMSMDRAAKRRAENPIKANDPKAQQTQMQM 239

Query: 519 ------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
                 +L  MPV+++    ++  GL +Y   +   S +QQ  + K   AE        +
Sbjct: 240 DMMQKMMLWVMPVLYLMGGFAWQVGLALYMVTNMTWSYLQQFFLYKKMDAEEEAQKEAVA 299

Query: 573 TFSKNYNSQ 581
              +    +
Sbjct: 300 AAKRTSAPK 308


>gi|254993106|ref|ZP_05275296.1| OxaA-like protein precursor [Listeria monocytogenes FSL J2-064]
          Length = 249

 Score = 88.9 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 36/230 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393
            Y I      +M     + GN+GIAI++TT+ ++ L  PL  +   +   M++       
Sbjct: 36  TYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95

Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449
                   L+    +     +QK M+ +Y  +NINP+  GC P+L+Q+P+  A Y  I  
Sbjct: 96  EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           S E+  +  + W  +L + D                      +  II  L    Q  +S 
Sbjct: 156 SSEIA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192

Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
                 Q   +  +    P++ +F   + P+ L +YW+   +    Q  +
Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLL 242


>gi|315640647|ref|ZP_07895752.1| membrane protein [Enterococcus italicus DSM 15952]
 gi|315483586|gb|EFU74077.1| membrane protein [Enterococcus italicus DSM 15952]
          Length = 313

 Score = 88.9 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 86/256 (33%), Gaps = 32/256 (12%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
             +      F+          F   +    I + +  + + +     A  Q      +K 
Sbjct: 44  KTLVVPLGDFLTYLATNFNWGFGWAIIIVTIVVRIILLPMGISQSKKAMVQSEKMQYLKP 103

Query: 392 IQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVIS 448
                    ++      Q+  +  M ++YK +N+N L   GC P+L+Q+P+F A+Y  +S
Sbjct: 104 QMDIAQANLKQATTREEQLKAQTEMQKIYKENNVNMLGGIGCLPLLIQMPIFSALYFTVS 163

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
            +  +  A F G                       +       I+  +  LS   Q  +S
Sbjct: 164 YTQGINTATFMG-----------------------VNLGKANLIFVALAGLSYVGQSYLS 200

Query: 509 PPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
                + Q   +  M    P++ VF     PAG+ +YW    + S  Q  +   +   + 
Sbjct: 201 LIGIPEEQKKTMRSMMIVSPLMIVFMSLKAPAGVTLYWVIGGIFSCFQTFITNVLM--KP 258

Query: 565 GLIDRLRSTFSKNYNS 580
            +  ++      N   
Sbjct: 259 RIKKQIEEEMRLNPPK 274


>gi|311068990|ref|YP_003973913.1| OxaA-like protein precursor [Bacillus atrophaeus 1942]
 gi|310869507|gb|ADP32982.1| OxaA-like protein precursor [Bacillus atrophaeus 1942]
          Length = 277

 Score = 88.9 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 89/233 (38%), Gaps = 47/233 (20%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE--------LREKFKQSP 407
             G +G++IML T+ V+++  PL   Q+      +     I          +++      
Sbjct: 59  FNGEYGLSIMLVTIIVRVIVLPLFVHQFKKQRVFQEKMAVIKPQIDSIQAKIKKNKDPEK 118

Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            + LQ  M++LY+ +N+NPL  GC P+L+Q P+    Y  I  + E+     + W   L 
Sbjct: 119 QKELQMEMMKLYQENNLNPLAMGCLPMLVQFPILIGFYYAIRSTPEIASHS-FLWFS-LG 176

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ----MKMS------PPPADKGQ 516
            +D                      +  +      FIQ     K+S      P      Q
Sbjct: 177 QSD---------------------ILVSLCAGAMYFIQAYVAQKLSAKYSAVPQNPAAQQ 215

Query: 517 -AMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI---MKMHGAEI 564
            A I+  + PV+      + PA L +YW  S +   VQ  ++      +  + 
Sbjct: 216 SAKIMVFFFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNVILQQTYHKNKNKE 268


>gi|325695044|gb|EGD36947.1| SpoIIIJ family protein [Streptococcus sanguinis SK150]
          Length = 307

 Score = 88.9 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391
             W          +  +  N    +G+AI++ T+ V+++        + K  + +  M  
Sbjct: 35  LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
            +P    ++E+ K +  Q      Q+ ++   K + ++     GC P+L+Q+P F A++ 
Sbjct: 95  FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  +  + WIKDLA +D                          I+ +  +IQ 
Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------WALTAIVGILYYIQS 192

Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            +S     D+ Q   +    +M P++ V      PA + +YW     I I+     +  +
Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINY 250

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
                L  ++   F KN   
Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270


>gi|295428677|ref|ZP_06821303.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|295127347|gb|EFG56987.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus EMRSA16]
          Length = 290

 Score = 88.9 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 101/252 (40%), Gaps = 35/252 (13%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           ++     PM  ++ +  N  L  N+G+AI++  + ++++  P     Y ++  M+     
Sbjct: 32  FYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKV 91

Query: 396 IDELREKFKQ--------SPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIY 444
                EK ++               + ++Q+YK +++NP   + GC P+L+Q+P+   +Y
Sbjct: 92  AKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLY 151

Query: 445 KVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   +   +   P + W  DL   D                      I  ++  +  +
Sbjct: 152 FVLKDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAGVLYFIQAY 193

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMH 560
           +  K  P    +   M++   P++ ++   S  + L +YWS S    +VQ     I    
Sbjct: 194 VSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEK 253

Query: 561 GAEIGLIDRLRS 572
            A+  L   + +
Sbjct: 254 VAKKELQPFIEA 265


>gi|68537196|ref|YP_251901.1| putative inner membrane protein translocase component YidC
           [Corynebacterium jeikeium K411]
 gi|68264795|emb|CAI38283.1| preprotein translocase YidC subunit [Corynebacterium jeikeium K411]
          Length = 324

 Score = 88.9 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 63/309 (20%), Positives = 117/309 (37%), Gaps = 67/309 (21%)

Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
             FI  P+  ++ +++ L            + +AIM     +++L       Q  S+  M
Sbjct: 1   MDFIYYPVSGVLWFWHKLFSYVLSPDSGITWALAIMFLVFTIRILLVKPMANQLRSSRKM 60

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-- 447
           + +QPK+ EL+ K+K    Q L   M +L K   +NPLA C P+L+Q+P+F  ++ V+  
Sbjct: 61  QEMQPKMQELQRKYKN-DRQTLAVEMRKLQKEMGVNPLASCLPMLVQMPIFLGLFHVLRS 119

Query: 448 ------------SISLEMRHAPFWGWI--------------KDLA---AADP--TNIFTL 476
                           E R+ P + +                 L+   + DP     F+ 
Sbjct: 120 FNRTGTGVGQLGMTVEETRNTPNYFFGVHEVQSFLDARIFGTPLSGFISMDPNNYRAFSA 179

Query: 477 FGILPFYLPGFMHVGI-WPIIMSLSMFIQMKMSPPPA------DKGQAM----------- 518
            G + F     + V +   ++ S+ M    +MS   A      +  +A            
Sbjct: 180 DGHVDFTRTNIILVVVPMMLVASVLMHFSARMSMDRAAKRRAENPIKANDPKAQQTQMQM 239

Query: 519 ------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
                 +L  MPV+++    ++  GL +Y   +   S +QQ  + K   AE        +
Sbjct: 240 DMMQKMMLWVMPVLYLMGGFAWQVGLALYMVTNMTWSYLQQFFLYKKMDAEDEAQKEAVA 299

Query: 573 TFSKNYNSQ 581
              +    +
Sbjct: 300 AAKRTSAPK 308


>gi|326429399|gb|EGD74969.1| hypothetical protein PTSG_07193 [Salpingoeca sp. ATCC 50818]
          Length = 370

 Score = 88.5 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 85/214 (39%), Gaps = 34/214 (15%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------V 410
            ++   I+L+T+ ++ L  P+      +   M N++P++    ++ KQ   Q        
Sbjct: 72  MSWFGGIVLSTIAIRTLMLPITVAMMRNNVTMMNLRPEMQLHADRIKQCAAQGDEEGKIA 131

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF----WGWIKDLA 466
             + + +L K + ++PL        QIPVF + +  +        A      + +  DL 
Sbjct: 132 ASQRLQELMKKNGVSPLKS-LYGFAQIPVFLSFFFALRSITGGEVASIKTGGYSFFTDLT 190

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMILNWM 523
           AADPT                    + P++ + +M +  ++S             +   +
Sbjct: 191 AADPTY-------------------VLPVVTATTMLLSFELSSRMGTAMSPTMKKVFRGL 231

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            +V     ++ P G+  YW  SN+ ++ Q AV+ 
Sbjct: 232 ALVTGAVTATLPMGIHAYWITSNIFTLGQVAVLN 265


>gi|319440491|ref|ZP_07989647.1| putative inner membrane protein translocase component YidC
           [Corynebacterium variabile DSM 44702]
          Length = 424

 Score = 88.5 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 56/296 (18%), Positives = 104/296 (35%), Gaps = 75/296 (25%)

Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++ +++              + ++I+   V ++LL      KQ  S   
Sbjct: 1   MLNFIYYPISWVLWFWHKAWGLILDPDSGITWALSIIFLVVTLRLLLLRPMIKQLRSGRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QP++ E++ K+ +   Q     M +L K   +NPLA C P+L+QIP+F  ++ V+ 
Sbjct: 61  MQEMQPRMQEIKRKYAKDQQQQAL-EMRKLQKEMGVNPLASCLPMLVQIPIFIGLFHVLR 119

Query: 449 I-------------SLE----------------------MRHAPFWGWIKDLAAADPTNI 473
                         S+E                      +  AP   +I      D    
Sbjct: 120 SFNRTGTGTGQLGMSIEETRNTANYGFGIDEVQSFLDARLFGAPLSSYISMPT--DSFGA 177

Query: 474 FTLFGILPFYLPGFMHVGI-WPIIMSLSMFI---------------------------QM 505
           FT  G + F       V I   ++ ++ M                             Q 
Sbjct: 178 FTDDGSVDFTRANIAFVVIPMMLVAAVIMHFNAKHSLVRQARRKAEQAKSKKKGATTPQQ 237

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            M        Q +++  MPV+ +     +  GL +Y   +   + VQQ ++ +   
Sbjct: 238 DMMENQMAMMQKLMVWVMPVLSLVGAYFWHVGLAVYMLTNTSWTFVQQVLVYRKMD 293


>gi|221091302|ref|XP_002169136.1| PREDICTED: similar to Mitochondrial inner membrane protein OXA1L
           [Hydra magnipapillata]
          Length = 424

 Score = 88.5 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 118/357 (33%), Gaps = 87/357 (24%)

Query: 258 YWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317
           +++S  I S   +        +      +   S+      PG S +              
Sbjct: 73  FFSSTSILSNIQACGLHATACTGEAGIEEGGSSSGIADAEPGNSES----SIEPQAVNEI 128

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVK 372
           ++             +                +   ++ +       +   I+ TTV  +
Sbjct: 129 LNDVGSMNTFVTGVDVPITTLEGLGGYTPVGFVHNIFDFIHLSVGLPWWGTIIATTVAFR 188

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNIN 425
            L FPL  K   +TA +  ++P++++L+EK +++               +   +K HN N
Sbjct: 189 ALVFPLMIKGQANTARLAAVKPELEKLQEKLREAANYHNPNIRAQASIELQDFFKKHNCN 248

Query: 426 PLAGCWPILLQIPVFFAIY----KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           PL      L+Q+P+F + +    K+ ++ +E        W  DL+AADP  IF       
Sbjct: 249 PLKSIISPLVQLPLFISFFIAIRKMCNLPVESLQTGGILWFSDLSAADPYMIF------- 301

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541
                       PI  + +M + ++                               + +Y
Sbjct: 302 ------------PIACAFTMLLTIE------------------------------AIFLY 319

Query: 542 WSWSNVISIVQQAV-----------IMKMHGAEIG-------LIDRLRSTFSKNYNS 580
           W  SNV+S+VQ  V           I K+   ++         ++ L++ F     +
Sbjct: 320 WMTSNVLSLVQVMVLKVPGVMTFFNIPKVVPVKMDPNIQTGTFMENLKAGFKNAKEA 376


>gi|15925080|ref|NP_372614.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927665|ref|NP_375198.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus N315]
 gi|21283742|ref|NP_646830.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MW2]
 gi|49486883|ref|YP_044104.1| hypothetical protein SAS1994 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650764|ref|YP_186898.1| hypothetical protein SACOL2082 [Staphylococcus aureus subsp. aureus
           COL]
 gi|82751692|ref|YP_417433.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus
           RF122]
 gi|87161292|ref|YP_494692.1| membrane protein oxaA precursor [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88195993|ref|YP_500806.1| hypothetical protein SAOUHSC_02327 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268542|ref|YP_001247485.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus
           subsp. aureus JH9]
 gi|150394606|ref|YP_001317281.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus
           subsp. aureus JH1]
 gi|151222206|ref|YP_001333028.1| membrane protein oxaA precursor [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156980406|ref|YP_001442665.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu3]
 gi|253317154|ref|ZP_04840367.1| membrane protein oxaA precursor [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253731073|ref|ZP_04865238.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           aureus subsp. aureus USA300_TCH959]
 gi|253733076|ref|ZP_04867241.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           aureus subsp. aureus TCH130]
 gi|255006879|ref|ZP_05145480.2| membrane protein oxaA precursor [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257426229|ref|ZP_05602644.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428887|ref|ZP_05605281.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431497|ref|ZP_05607870.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus 68-397]
 gi|257434206|ref|ZP_05610556.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus E1410]
 gi|257437118|ref|ZP_05613158.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus
           M876]
 gi|257793849|ref|ZP_05642828.1| membrane protein oxaA [Staphylococcus aureus A9781]
 gi|258407017|ref|ZP_05680167.1| membrane protein OxaA [Staphylococcus aureus A9763]
 gi|258422038|ref|ZP_05684955.1| membrane-embedded lipoprotein [Staphylococcus aureus A9719]
 gi|258422909|ref|ZP_05685809.1| membrane-embedded lipoprotein [Staphylococcus aureus A9635]
 gi|258433592|ref|ZP_05688665.1| membrane protein oxaA [Staphylococcus aureus A9299]
 gi|258440487|ref|ZP_05690657.1| membrane-embedded lipoprotein [Staphylococcus aureus A8115]
 gi|258445695|ref|ZP_05693873.1| membrane protein oxaA [Staphylococcus aureus A6300]
 gi|258450149|ref|ZP_05698244.1| membrane-embedded lipoprotein [Staphylococcus aureus A6224]
 gi|258453199|ref|ZP_05701190.1| membrane protein oxaA [Staphylococcus aureus A5948]
 gi|258453396|ref|ZP_05701378.1| membrane protein oxaA [Staphylococcus aureus A5937]
 gi|262049258|ref|ZP_06022133.1| lipoprotein precursor [Staphylococcus aureus D30]
 gi|269203726|ref|YP_003282995.1| hypothetical protein SAAV_2144 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282894735|ref|ZP_06302961.1| membrane protein oxaA [Staphylococcus aureus A8117]
 gi|282904758|ref|ZP_06312632.1| putative lipoprotein [Staphylococcus aureus subsp. aureus C160]
 gi|282906435|ref|ZP_06314286.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282909403|ref|ZP_06317218.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911655|ref|ZP_06319454.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914937|ref|ZP_06322717.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M899]
 gi|282920268|ref|ZP_06327992.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C427]
 gi|282923079|ref|ZP_06330764.1| membrane protein oxaA [Staphylococcus aureus A9765]
 gi|282925479|ref|ZP_06333133.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C101]
 gi|282929015|ref|ZP_06336600.1| membrane protein oxaA [Staphylococcus aureus A10102]
 gi|283771258|ref|ZP_06344147.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus H19]
 gi|283958870|ref|ZP_06376315.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284025125|ref|ZP_06379523.1| hypothetical protein Saura13_11083 [Staphylococcus aureus subsp.
           aureus 132]
 gi|293509008|ref|ZP_06667795.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510921|ref|ZP_06669620.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus M809]
 gi|293547523|ref|ZP_06672198.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M1015]
 gi|294850062|ref|ZP_06790799.1| membrane protein oxaA [Staphylococcus aureus A9754]
 gi|295407021|ref|ZP_06816823.1| membrane protein oxaA [Staphylococcus aureus A8819]
 gi|296276880|ref|ZP_06859387.1| hypothetical protein SauraMR_11054 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297210090|ref|ZP_06926483.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297246020|ref|ZP_06929877.1| membrane protein oxaA [Staphylococcus aureus A8796]
 gi|297589843|ref|ZP_06948483.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MN8]
 gi|300910453|ref|ZP_07127905.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus TCH70]
 gi|304379271|ref|ZP_07362010.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|54038805|sp|P65629|OXAA_STAAN RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|54038806|sp|P65630|OXAA_STAAW RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|54041694|sp|P65628|OXAA_STAAM RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|56749186|sp|Q6G7M0|OXAA_STAAS RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|81694068|sp|Q5HEA9|OXAA_STAAC RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|122538967|sp|Q2FWG4|OXAA_STAA8 RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|123484953|sp|Q2FF36|OXAA_STAA3 RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|123548228|sp|Q2YUI9|OXAA_STAAB RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|189036365|sp|A7X4S6|OXAA_STAA1 RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|189036366|sp|A6U3H6|OXAA_STAA2 RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|189036367|sp|A5IUN6|OXAA_STAA9 RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|189036368|sp|A6QIT4|OXAA_STAAE RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|13701885|dbj|BAB43177.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus N315]
 gi|14247863|dbj|BAB58252.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu50]
 gi|21205184|dbj|BAB95878.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MW2]
 gi|49245326|emb|CAG43801.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57284950|gb|AAW37044.1| membrane protein, putative [Staphylococcus aureus subsp. aureus
           COL]
 gi|82657223|emb|CAI81663.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus
           RF122]
 gi|87127266|gb|ABD21780.1| membrane protein oxaA precursor [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87203551|gb|ABD31361.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741611|gb|ABQ49909.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149947058|gb|ABR52994.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus
           subsp. aureus JH1]
 gi|150375006|dbj|BAF68266.1| membrane protein oxaA precursor [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156722541|dbj|BAF78958.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu3]
 gi|253725200|gb|EES93929.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           aureus subsp. aureus USA300_TCH959]
 gi|253728984|gb|EES97713.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           aureus subsp. aureus TCH130]
 gi|257270934|gb|EEV03107.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274229|gb|EEV05746.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257277738|gb|EEV08408.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus 68-397]
 gi|257280845|gb|EEV10990.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus E1410]
 gi|257283511|gb|EEV13638.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus
           M876]
 gi|257787821|gb|EEV26161.1| membrane protein oxaA [Staphylococcus aureus A9781]
 gi|257841350|gb|EEV65794.1| membrane protein OxaA [Staphylococcus aureus A9763]
 gi|257841938|gb|EEV66370.1| membrane-embedded lipoprotein [Staphylococcus aureus A9719]
 gi|257846933|gb|EEV70947.1| membrane-embedded lipoprotein [Staphylococcus aureus A9635]
 gi|257849323|gb|EEV73302.1| membrane protein oxaA [Staphylococcus aureus A9299]
 gi|257852556|gb|EEV76474.1| membrane-embedded lipoprotein [Staphylococcus aureus A8115]
 gi|257855534|gb|EEV78471.1| membrane protein oxaA [Staphylococcus aureus A6300]
 gi|257856623|gb|EEV79529.1| membrane-embedded lipoprotein [Staphylococcus aureus A6224]
 gi|257859145|gb|EEV82002.1| membrane protein oxaA [Staphylococcus aureus A5948]
 gi|257864377|gb|EEV87123.1| membrane protein oxaA [Staphylococcus aureus A5937]
 gi|259162623|gb|EEW47190.1| lipoprotein precursor [Staphylococcus aureus D30]
 gi|262076016|gb|ACY11989.1| hypothetical protein SAAV_2144 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269941690|emb|CBI50097.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282312880|gb|EFB43281.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C101]
 gi|282316128|gb|EFB46509.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C427]
 gi|282321140|gb|EFB51471.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M899]
 gi|282324420|gb|EFB54733.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282326673|gb|EFB56971.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330385|gb|EFB59903.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282589321|gb|EFB94413.1| membrane protein oxaA [Staphylococcus aureus A10102]
 gi|282593270|gb|EFB98267.1| membrane protein oxaA [Staphylococcus aureus A9765]
 gi|282594791|gb|EFB99768.1| putative lipoprotein [Staphylococcus aureus subsp. aureus C160]
 gi|282762823|gb|EFC02957.1| membrane protein oxaA [Staphylococcus aureus A8117]
 gi|283459463|gb|EFC06556.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus H19]
 gi|283789588|gb|EFC28411.1| putative lipoprotein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817755|gb|ADC38242.1| OxaI/YidC membrane insertion protein [Staphylococcus aureus
           04-02981]
 gi|290919643|gb|EFD96716.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M1015]
 gi|291094712|gb|EFE24984.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466206|gb|EFF08733.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus M809]
 gi|294823010|gb|EFG39442.1| membrane protein oxaA [Staphylococcus aureus A9754]
 gi|294968046|gb|EFG44073.1| membrane protein oxaA [Staphylococcus aureus A8819]
 gi|296885290|gb|EFH24230.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297177019|gb|EFH36274.1| membrane protein oxaA [Staphylococcus aureus A8796]
 gi|297576971|gb|EFH95685.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MN8]
 gi|300888295|gb|EFK83486.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333736|gb|ADL23929.1| OxaI/YidC membrane insertion protein [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302751971|gb|ADL66148.1| OxaI/YidC membrane insertion protein [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304342130|gb|EFM08030.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312830442|emb|CBX35284.1| 60Kd inner membrane family protein [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|315128761|gb|EFT84761.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus CGS03]
 gi|315193252|gb|EFU23650.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus CGS00]
 gi|315196976|gb|EFU27318.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140737|gb|EFW32589.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus
           subsp. aureus MRSA131]
 gi|320143713|gb|EFW35490.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus
           subsp. aureus MRSA177]
 gi|323439193|gb|EGA96920.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus O11]
 gi|323442429|gb|EGB00058.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus O46]
 gi|329724000|gb|EGG60524.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus
           subsp. aureus 21189]
 gi|329726332|gb|EGG62800.1| putative stage III sporulation protein J [Staphylococcus aureus
           subsp. aureus 21172]
 gi|329729297|gb|EGG65705.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus
           subsp. aureus 21193]
          Length = 290

 Score = 88.5 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 101/252 (40%), Gaps = 35/252 (13%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           ++     PM  ++ +  N  L  N+G+AI++  + ++++  P     Y ++  M+     
Sbjct: 32  FYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKV 91

Query: 396 IDELREKFKQ--------SPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIY 444
                EK ++               + ++Q+YK +++NP   + GC P+L+Q+P+   +Y
Sbjct: 92  AKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLY 151

Query: 445 KVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   +   +   P + W  DL   D                      I  ++  +  +
Sbjct: 152 FVLKDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAGVLYFIQAY 193

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMH 560
           +  K  P    +   M++   P++ ++   S  + L +YWS S    +VQ     I    
Sbjct: 194 VSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEK 253

Query: 561 GAEIGLIDRLRS 572
            A+  +   + +
Sbjct: 254 VAKKEVQPFIEA 265


>gi|320010617|gb|ADW05467.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces
           flavogriseus ATCC 33331]
          Length = 256

 Score = 88.5 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 22/246 (8%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           M      F  +   +  L+   +    +   AI+L T  V+L   PL++           
Sbjct: 1   MSAFMSAFASLVGALADLLQPLFQH-ASTAAAIVLFTALVRLAVHPLSRAAARGQKARTK 59

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +QP+I ELR+K  ++P   +QKA+++L+    ++PL+GC P LLQ+P FF +Y  +  S 
Sbjct: 60  LQPQIAELRKKHSKNPD-RMQKALMELHAKEKVSPLSGCLPSLLQMPAFFLLYH-LFSSQ 117

Query: 452 EMRHAPFWGWIKDL-AAADPT-NIFTLFGILPFYLPGFMHVGIWPIIMSLSMF------I 503
            +   P      +L  A         L    PF   G +++G++ I+ +++ F       
Sbjct: 118 RIGGEPNSLLGHELFGAPLGERWHHALSEGGPFGPQGLVYLGLFVIVAAVATFNYGRTKR 177

Query: 504 QMKMSPPPAD--------KGQAMILNWMPVVFVFALSS---FPAGLIIYWSWSNVISIVQ 552
           QM  +P             G   +   MP++    L S    P    +Y   S   + ++
Sbjct: 178 QMAANPMTPATGPDGQPVPGMGAMTKVMPLMSFLTLVSVAYVPLAAALYIVTSTTWTALE 237

Query: 553 QAVIMK 558
           +A + +
Sbjct: 238 RAYLYR 243


>gi|300814725|ref|ZP_07094973.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus sp.
           oral taxon 836 str. F0141]
 gi|300511112|gb|EFK38364.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus sp.
           oral taxon 836 str. F0141]
          Length = 244

 Score = 88.5 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 20/244 (8%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            +  ++   +  ++      +  + ++I++TT+ +K+L  PL   Q  +   M  +QP+I
Sbjct: 11  IFIRYVYNLIAQIIPNEPTNISYYALSIIITTLILKILVLPLTISQMKNQKKMAELQPEI 70

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
            ++++K+K   PQ L     QLYK+ N N L+GC P+++Q+ V F  Y+           
Sbjct: 71  AKIQKKYKN-DPQTLAMKQRQLYKSANYNVLSGCLPMIVQLLVLFGFYRCFYKP-----Q 124

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPAD 513
            +       + A               L       I P + +++ F    +   SP    
Sbjct: 125 TYIF-----SQAGFYQAMNKNFFYISNLGVADKTMILPALAAITTFFTSYLATKSPAAGA 179

Query: 514 ------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
                      ++  MP++  F   +  A LIIYW+ SN+ +IVQQ V+       +   
Sbjct: 180 GQDQAKSMMNSMMVAMPIMIFFMGRTLQAELIIYWTVSNIFAIVQQLVVNNFVKKSVEES 239

Query: 568 DRLR 571
           + LR
Sbjct: 240 NELR 243


>gi|321259157|ref|XP_003194299.1| hypothetical protein CGB_E3570C [Cryptococcus gattii WM276]
 gi|317460770|gb|ADV22512.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
          Length = 468

 Score = 88.5 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/286 (17%), Positives = 96/286 (33%), Gaps = 32/286 (11%)

Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370
              ++  E   A  +   L   G+ +            L++    L  ++  AI  TTV 
Sbjct: 97  QEVLNSEEAVHAAMKLSDLKLIGYDHGILSITGWFTDGLVALHTELGLSWWAAIAGTTVL 156

Query: 371 VKLLFFPLAKKQYVS-------TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           ++L    L                 ++ +  +              ++ + +  L K HN
Sbjct: 157 IRLCLTRLVVNTQKHSVRLAAVNPQIQELMTEAKTASANKDTHMQTLISQRLRDLMKEHN 216

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGI 479
           +NPL      L+Q+P+F   + ++     +          GW+ DL AADP  I     +
Sbjct: 217 VNPLRPLMLPLIQMPIFLTFFSIVRGLANLPLPQLKEGGLGWVTDLTAADPYYILPATSL 276

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DKGQAMILNWMPVVFVFALSSFP 535
           L   L         P             SP       +  Q       P++       FP
Sbjct: 277 LFTNLVFKFGADGVPTAAKAG-------SPMTTAHIRNFIQLTTFLSFPLIM-----YFP 324

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           + L+ YW++S   +++Q  +I++    +  L   +    +    ++
Sbjct: 325 SALLFYWTFSTGFTLLQS-IILRQPIVKRYLGLPITKAQALEPGAE 369


>gi|49484314|ref|YP_041538.1| hypothetical protein SAR2179 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|56749221|sp|Q6GEY5|OXAA_STAAR RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|49242443|emb|CAG41159.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           MRSA252]
          Length = 290

 Score = 88.5 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 101/252 (40%), Gaps = 35/252 (13%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           ++     PM  ++ +  N  L  N+G+AI++  + ++++  P     Y ++  M+     
Sbjct: 32  FYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKV 91

Query: 396 IDELREKFKQ--------SPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIY 444
                EK ++               + ++Q+YK +++NP   + GC P+L+Q+P+   +Y
Sbjct: 92  AKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLY 151

Query: 445 KVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   +   +   P + W  DL   D                      I  ++  +  +
Sbjct: 152 FVLKDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAGVLYFIQAY 193

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMH 560
           +  K  P    +   M++   P++ ++   S  + L +YWS S    +VQ     I    
Sbjct: 194 VSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEK 253

Query: 561 GAEIGLIDRLRS 572
            A+  +   + +
Sbjct: 254 VAKKEVQPFIEA 265


>gi|160902082|ref|YP_001567663.1| 60 kDa inner membrane insertion protein [Petrotoga mobilis SJ95]
 gi|160359726|gb|ABX31340.1| 60 kDa inner membrane insertion protein [Petrotoga mobilis SJ95]
          Length = 465

 Score = 88.1 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 76/470 (16%), Positives = 161/470 (34%), Gaps = 60/470 (12%)

Query: 98  HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP-- 155
           + +++    +  L    N     F   D  +   N+    +   ++++  + +T   P  
Sbjct: 35  NQEINIEMKLYRLKLDQNGHILNFELYDSRTKKYNLVYEYTGDSYDILDTQNMTEILPSN 94

Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
             +      + +       +            N   D    +  G ++      ++    
Sbjct: 95  YNIRLAEDQSYIEVNYFFPNGGQKIYKFYNDPNYHFDVQFKNLYGYVVLPSISFSSGIRY 154

Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275
               F++ +       +                            +++ P +     +Q+
Sbjct: 155 SGNVFVSYIDKSVSTGEALDST----------------------LAIYTPEEIEFSQNQY 192

Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
            +  +   +    +      I   ++          +     +    K            
Sbjct: 193 LFPLNYSDQKIISYLGPTKKIFIKETFDGIEEGIVYSTVIDLMQDLGK------------ 240

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           +G F  I         + + + GNFG AI+L T+ V  + FP+  +Q  S   MK +QP+
Sbjct: 241 FGPFNNIFYWFVNFFWWLFKVTGNFGWAIILFTLIVNAILFPVYGRQKKSMIEMKQLQPE 300

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           ++++R+K+K    Q  Q+  ++LYK   +NP  GC   L+ +P+   +++VI    E  +
Sbjct: 301 LEKIRKKYKNP--QKQQEETLKLYKEKGVNPAGGCLTSLIPLPIMIILWQVIYY-FEGSY 357

Query: 456 A--PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           A  P +    DL+          F +L   +   ++     ++MS              D
Sbjct: 358 AYNPRFLLWTDLSLG--GFQANFFLLLLAIIASLINA----LLMS-------------QD 398

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
              A     M VVF F L   P G+ IY+S + VI  +   V  +++  +
Sbjct: 399 ARSAWTSVIMSVVFPFILIGLPVGVFIYYSLNTVIQTLLTFVYNRIYNVK 448


>gi|257067219|ref|YP_003153475.1| 60 kDa inner membrane insertion protein [Anaerococcus prevotii DSM
           20548]
 gi|256799099|gb|ACV29754.1| 60 kDa inner membrane insertion protein [Anaerococcus prevotii DSM
           20548]
          Length = 245

 Score = 88.1 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 36/229 (15%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           + IAI++ T+ V LL  P+   Q       K  +PK++E+++K+     Q++Q+ M +LY
Sbjct: 33  YAIAIVIMTLLVSLLIIPMTVSQQKQAERTKVFKPKMEEIQKKY-GYDQQIMQQKMQELY 91

Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISISLEMRHA-------PFWGWIKDLAAADPT 471
           K   + P L+GC  +++QI + F +++++S + +             + WI DL   DP 
Sbjct: 92  KEEGVTPGLSGCLVMIIQILILFGLFRMMSDTTKYVFTEGLDNIRTNFYWIPDLLQKDPY 151

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA---------MILNW 522
                                 P++ SLS       S     + Q           +L  
Sbjct: 152 WFG------------------LPLLTSLSQVGVQLFSMKTNPQMQQAGGAMGGMNNMLLL 193

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
           MP+++ F     PAGL +Y++ S++  +V   ++      +   ++  +
Sbjct: 194 MPLMYFFVFRGLPAGLPLYYTLSSLFRLVIMVIMHFSMRNKKMELENEK 242


>gi|170016762|ref|YP_001727681.1| preprotein translocase subunit YidC [Leuconostoc citreum KM20]
 gi|169803619|gb|ACA82237.1| Preprotein translocase subunit YidC [Leuconostoc citreum KM20]
          Length = 304

 Score = 88.1 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 96/264 (36%), Gaps = 43/264 (16%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
               + +I  P+  +M+   +++      G AI++ T  ++L+  P    Q V+T   + 
Sbjct: 27  HSKMYRWIGHPLADIMTNIAHVIGGPNGIGWAIIIITAILRLVLLPFFLNQQVNTTINQI 86

Query: 392 IQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFF 441
               +           R+       Q    AM+ LY+ ++++ + G     + +Q+PVF 
Sbjct: 87  KMQTLKPEIDKLQALSRKAGTTEEQQKASMAMMSLYRENDVSVIGGISFLTMAMQLPVFS 146

Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501
            +Y  I  +  ++ A F G+  +L+                         ++ II  L  
Sbjct: 147 GLYSAILHAPALKGASFLGF--NLSHP---------------------QIVFAIISGLVY 183

Query: 502 FIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            IQ  ++     + Q      ++   P++           + +Y+    + +++Q  +  
Sbjct: 184 LIQAWLAMQHMPEEQKKTSAAMMFISPIMIFGFAMIASGAIGLYFVVGGLFALIQTLI-- 241

Query: 558 KMHGAEIGLIDRLRSTFSKNYNSQ 581
             H    GL  R+   F     + 
Sbjct: 242 -QHFQRPGLEKRVALEFKIKKTAD 264


>gi|327470412|gb|EGF15868.1| SpoIIIJ family protein [Streptococcus sanguinis SK330]
          Length = 307

 Score = 88.1 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391
             W          +  +  N    +G+AI++ T+ V+++        + K  + +  M  
Sbjct: 35  LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
            +P    ++E+ K +  Q      Q+ ++   K + ++     GC P+L+Q+P F A++ 
Sbjct: 95  FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  +  + WIKDLA +D                          I+ +  +IQ 
Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------WALTAIVGILYYIQS 192

Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            +S     D+ Q   +    +M P++ V      PA + +YW     I I+     +  +
Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINY 250

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
                L  ++   F KN   
Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270


>gi|237784737|ref|YP_002905442.1| putative inner membrane protein translocase component YidC
           [Corynebacterium kroppenstedtii DSM 44385]
 gi|237757649|gb|ACR16899.1| putative membrane protein [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 447

 Score = 87.7 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 52/267 (19%), Positives = 101/267 (37%), Gaps = 47/267 (17%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM- 415
           + ++  ++ L  + V+L+  P A  QY ST    N++P I+++RE++K  P    +K   
Sbjct: 29  ISSWIASLFLLVMTVRLILLPFAYAQYKSTRIQVNLRPVINQIREEYKDKPGTAARKERI 88

Query: 416 ---IQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---------SISLEMRHAPF-WGWI 462
               +  K       AGC P+ +Q+P F  +Y+V+           + E  H P  +   
Sbjct: 89  AKEQKARKDAGYRLSAGCLPVFIQLPFFLGLYRVLIHMARPKGGLGTTE--HQPIGFLTS 146

Query: 463 KDLA---------AADPTNIFTLFGILPFYLPGFMHVGIW--PIIMSLSMFIQMKMS--- 508
           +D+             P         L         +     P+++  S F  + MS   
Sbjct: 147 QDVGQFLQAKAFGVPLPAYAAMASERLQAMGTDKSTIYTLAVPLVLIASTFTTINMSYST 206

Query: 509 ----------PPPADKGQAMI--LNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
                      P A + Q +I  +  M    P++F       P  ++ YW  +N+ ++ Q
Sbjct: 207 YRSYRQLEHDNPIAVRMQKIIIPMAIMGSASPLLFGLTS-PVPVAILFYWVGNNLWTMSQ 265

Query: 553 QAVIMKMHGAEIGLIDRLRSTFSKNYN 579
             ++ +    +       R  F++   
Sbjct: 266 NILLYRTIDKKYPYTQEFREHFARTKA 292


>gi|242371581|ref|ZP_04817155.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           epidermidis M23864:W1]
 gi|242350701|gb|EES42302.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           epidermidis M23864:W1]
          Length = 286

 Score = 87.7 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 106/261 (40%), Gaps = 35/261 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394
           +F    +PM  L+ +  N V N  +G+AI++  + ++L+  P     Y ++  M+     
Sbjct: 32  FFNTFVQPMKHLLQWLGNDVFNNDYGLAIIILVLVIRLILLPFMLSNYKNSHMMREKMKV 91

Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + ++++YK +++NP+    GC P+L+Q+P+   +Y
Sbjct: 92  AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIMGLY 151

Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   L   +   P + W  +L   D                      I  ++  +  +
Sbjct: 152 FVLKDKLVSGLSAHPHFLWF-NLTKPD-----------------IWITIIAGVLYFIQAY 193

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMH 560
           +  K  P    +   M++   P++ ++      + L +YWS S +  ++Q     +    
Sbjct: 194 VSSKTMPQEQRQMGYMMMIVSPIMIIWISLQASSALGLYWSVSALFLVIQTHFANVYYSK 253

Query: 561 GAEIGLIDRLRSTFSKNYNSQ 581
            A+  +   +     ++  S+
Sbjct: 254 LAKKEVQPFIEQYEKEHNPSK 274


>gi|213026875|ref|ZP_03341322.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 195

 Score = 87.7 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 60/204 (29%), Gaps = 18/204 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1   MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
              A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y
Sbjct: 51  GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175
            A+             N       +               + + + +A    F +T    
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168

Query: 176 -EHYLFKIVDTVTNNSIDQIRFSP 198
              Y   +  +V N     +   P
Sbjct: 169 RGDYAVNVNYSVQNTGEKPLESPP 192


>gi|145347471|ref|XP_001418188.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like
           protein [Ostreococcus lucimarinus CCE9901]
 gi|144578417|gb|ABO96481.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like
           protein [Ostreococcus lucimarinus CCE9901]
          Length = 304

 Score = 87.7 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 40/243 (16%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           E++      +     +   M YF+      + +AI+  TVF++ + FPL   Q  +TA M
Sbjct: 27  EVVPVASQSWPTTAALMYAMEYFHVAHGLEWWLAIVGATVFMRTITFPLIVMQMRNTAKM 86

Query: 390 KNIQPKIDELREKFKQSPPQ------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
           +  +P+++ L+ K K +P Q         K M +++K +++NP+    PIL+  PVF + 
Sbjct: 87  QLCKPELEALQAKMKSNPQQDPELANAYYKEMQKVWKKYDVNPVKSFAPILINAPVFISF 146

Query: 444 YKVISI------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
           +  IS       S E      +    DL+ ADPT                      PI+ 
Sbjct: 147 FFAISKMAQGVPSFESGGPSMY---PDLSMADPTYS-------------------LPILS 184

Query: 498 SLSMFIQMKMS----PPPADKGQAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           SL+    +++        +   Q       + V  V   +SFP G+ +YW  SN+ S  Q
Sbjct: 185 SLTFLASVELGAVEGMQTSQSAQMKWFLRALAVAMVPLTASFPQGVFVYWITSNIFSGFQ 244

Query: 553 QAV 555
            ++
Sbjct: 245 TSI 247


>gi|260950689|ref|XP_002619641.1| hypothetical protein CLUG_00800 [Clavispora lusitaniae ATCC 42720]
 gi|238847213|gb|EEQ36677.1| hypothetical protein CLUG_00800 [Clavispora lusitaniae ATCC 42720]
          Length = 353

 Score = 87.4 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 93/283 (32%), Gaps = 24/283 (8%)

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
           F     T     S+ +       + E  ++           +   I     Y     +  
Sbjct: 20  FVRFNSTSEAQNSVVSEIKTSLPSFENTSLPETLMTSDQIGYLQSIGLADGYGPTALIER 79

Query: 349 LMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR---EKFK 404
           ++ Y +   G      I+  T   +   FPL  K   + A M  ++P++D+L    +   
Sbjct: 80  MLEYTHVYSGLPWWGTIIAGTFIARAFMFPLYVKSSANMAKMARVKPELDQLMNDIKTGD 139

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPIL---LQIPVFFAIYKVISISLEMRHAPFWGW 461
                +  +   +LYK + I       P+    L    F A  K+ +  +E        W
Sbjct: 140 NEDRMLAMRKRTKLYKENGIKTAHSLLPMAQLPLAYGFFQATRKMAAYPVEGFSTQGAYW 199

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAMIL 520
            +DL   DP                 + + I   ++   M      +     +     ++
Sbjct: 200 FQDLTQVDPY----------------LGLQILTALVVTGMMRSGGETGAQAMNPMMKKVM 243

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            W+P   +    S  + +++Y++ ++V S  Q  V+   +  +
Sbjct: 244 TWLPFASILITQSMSSAVVLYFAANSVFSFFQSLVLKNKYFRK 286


>gi|291548772|emb|CBL25034.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
           [Ruminococcus torques L2-14]
          Length = 444

 Score = 87.4 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 26/145 (17%)

Query: 462 IKDLAA--ADPTNIFTLFGILPF---------------YLPGFMHVGIWPIIMSLSMFIQ 504
           I DLA    D       F  +                  + G +   + P++  L+ FI 
Sbjct: 211 ITDLAQQTMDKVTHLNSFLGINIGEQPLTQLTAAFHNGSVVGIILAVLIPVLAGLTQFIS 270

Query: 505 MKMSPPPA-----DKG--QAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +K+ P PA     +        + + MP++ VF   + PAGL +YW+ S  +  +QQ  I
Sbjct: 271 VKLQPQPAGDDKDNPMASSMKTMTYTMPLISVFMGFTLPAGLGLYWAASAAVRCIQQLAI 330

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581
            K    +  L + ++    K    +
Sbjct: 331 NKYLSTK-SLDEMIKENQKKAQKKR 354



 Score = 47.3 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 5/123 (4%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           +  I     + + + M  + +    + + N G+ I++ T+ +  L  PL  KQ   +   
Sbjct: 13  DWPIIKQIAWLLGQVMNGIFNVLSKIGIENIGVCIIIFTIIIYTLMIPLTIKQQKFSKMS 72

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYK 445
             +QP+I ++++K++    Q       +    +Y+ +  +   GC P+L+Q+P+ FA+Y 
Sbjct: 73  AVMQPEIKKIQKKYEGKKDQASMMKQQEEINLVYEKYGTSMTGGCLPMLIQMPILFALYP 132

Query: 446 VIS 448
           VI 
Sbjct: 133 VIR 135


>gi|283471308|emb|CAQ50519.1| membrane protein OxaA [Staphylococcus aureus subsp. aureus ST398]
          Length = 290

 Score = 87.4 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 101/252 (40%), Gaps = 35/252 (13%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           ++     PM  ++ +  N  L  N+G+AI++  + ++++  P     Y ++  M+     
Sbjct: 32  FYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKV 91

Query: 396 IDELREKFKQ--------SPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIY 444
                EK ++               + ++Q+YK +++NP   + GC P+L+Q+P+   +Y
Sbjct: 92  AKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLY 151

Query: 445 KVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   +   +   P + W  DL   D                      I  ++  +  +
Sbjct: 152 FVLKDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAGVLYFIQAY 193

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMH 560
           +  K  P    +   M++   P++ ++   S  + L +YWS S    +VQ     I    
Sbjct: 194 VSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEK 253

Query: 561 GAEIGLIDRLRS 572
            A+  +   + +
Sbjct: 254 VAKKEVQPFIEA 265


>gi|21325713|dbj|BAC00334.1| Preprotein translocase subunit YidC [Corynebacterium glutamicum
           ATCC 13032]
          Length = 434

 Score = 87.4 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 55/287 (19%), Positives = 105/287 (36%), Gaps = 50/287 (17%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVS 385
           +      +  P+  +M  ++ L+ N         +  ++    + ++ +  P   + Y S
Sbjct: 10  NTIVLDILIYPVSGVMKLWHLLLHNVAGLDDSLAWFFSLFGLVITIRAIIAPFTWQMYKS 69

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFF 441
                +I+P    LRE++K    +   + + +    L K + INPLAGC P L+QIP+  
Sbjct: 70  GRTAAHIRPHRAALREEYKGKYDEASIRELQKRQNDLNKEYGINPLAGCVPGLIQIPIVL 129

Query: 442 AIYKVISISLEMRHA---PFWGWIKDLA--------------AADPTNIF---------- 474
            +Y  +            P +  I  L                  P  +           
Sbjct: 130 GLYWALLRMARPEGGLENPVFQSIGFLTPEEVESFLAGRVSNVPLPAYVSMPTEQLKYLS 189

Query: 475 -TLFGILPFYLPGFMHVGIWPII-MSLSMF--IQMKMSPPPADKGQAMILNWMPVVFVFA 530
            T   +L F LP F+   I   I M++SM+   Q          G    +  M ++    
Sbjct: 190 TTQAEVLSFVLPLFITAAILTAINMAMSMYRSFQTNDYASGFSNGMLKFMIVMSILAPIF 249

Query: 531 ------LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
                    FP  + +YW  +N+ +++Q  ++M +   +  L D  +
Sbjct: 250 PLSLGLTGPFPTAIALYWVSNNLWTLLQTIIMMVILERKYPLTDDFK 296


>gi|210634757|ref|ZP_03298285.1| hypothetical protein COLSTE_02212 [Collinsella stercoris DSM 13279]
 gi|210158697|gb|EEA89668.1| hypothetical protein COLSTE_02212 [Collinsella stercoris DSM 13279]
          Length = 259

 Score = 87.4 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 24/260 (9%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            + +I + +F  +       G++G++I++  V ++L   P+  K   STA M+ +QPK+ 
Sbjct: 1   MWDWIVQILFQALQLIQGFAGDWGLSIIILVVIIRLALTPMMLKSTKSTARMQVLQPKLM 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI------SL 451
           E++E++    PQ   + M + Y  +  NPL GC P+L+Q+P+  A++ ++          
Sbjct: 61  EIQERYAD-DPQRQAEEMQKFYSENKFNPLGGCLPLLIQMPILIALFNLLRDLGHYFPDA 119

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
             +   F+  + +L  +        FG    YL   +  G+   I    M++    +   
Sbjct: 120 AEQGFSFYNILPNLVMSPAQAFVDGFGAALPYLLALILFGVLTFI--PQMYMTRNQTGAQ 177

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM-------------K 558
           A     M++  M ++ +F     PAG+++Y+  S+   ++QQ  +              +
Sbjct: 178 AQST-KMMMVVMTIMMLFMGWGLPAGVLLYYDVSSAWQVIQQIFVTQKVIEKAKAEEEER 236

Query: 559 MHGAEIGLIDRLRSTFSKNY 578
           M  A I + D +R    K  
Sbjct: 237 MTNAPIEV-DVVRREHKKRP 255


>gi|217033105|ref|ZP_03438569.1| hypothetical protein HPB128_27g12 [Helicobacter pylori B128]
 gi|216945178|gb|EEC23869.1| hypothetical protein HPB128_27g12 [Helicobacter pylori B128]
          Length = 369

 Score = 87.4 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 61/383 (15%), Positives = 110/383 (28%), Gaps = 45/383 (11%)

Query: 2   ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             N N  +AIALS + +  +  F+  P        ++           +   A       
Sbjct: 4   NNNTNLILAIALSFLFIALYSYFFQKPNKPTTQTTKQETTNNHTATSPNAPNAFSATQTI 63

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNT 116
            Q   +S    +        I+  G +   + L+     ++            L S    
Sbjct: 64  PQENLLSA---ISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSSKEN 118

Query: 117 KNAYFAELDYVSTANNIEL----------PNSNTVWNLISGKILTPTTPIKLVFKNANNI 166
                 EL  ++      L            +       S   L P   + L        
Sbjct: 119 MQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGAFT 178

Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
           + +     D+ HY  KI     NN        P   I       A        G +    
Sbjct: 179 IIKTLTFYDDLHYDLKIAFKSPNN------LIPSYVITNGYRPVADLDSYTFSGVLLENN 232

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           DK + + +  D   +       +  +L   D+Y+ ++        F +            
Sbjct: 233 DKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS-------- 281

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
             +                    + G K++ ++         P    +I++G   F AK 
Sbjct: 282 --EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKG 334

Query: 346 MFMLMSYFYNLVGNFGIAIMLTT 368
           +F+L+ Y Y  VGN+G AI+  T
Sbjct: 335 VFVLLDYLYQFVGNWGWAIIFLT 357


>gi|14334120|gb|AAK60543.1|AF382189_1 OXA1 [Podospora anserina]
          Length = 426

 Score = 87.4 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 83/266 (31%), Gaps = 46/266 (17%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTA 387
            F   +   + +     M  ++ + Y   G    A I L ++ ++ +             
Sbjct: 117 GFLKNLGLDYGFGPTALMEWILEHTYIYTGLPWWASIGLVSLAIRAVLVKPMFTAAEMAQ 176

Query: 388 NMKNIQ---PKIDELREKFKQSPPQVLQKAMI--------QLYKTHNINPLAGCWPILLQ 436
            +++++         +E           +  +         + +      L    P L+Q
Sbjct: 177 KLQDLKRDPKYEQLEKEVMSAFQGGQADQYAMLDKRNKMKAMRRAVGYKMLPASVPALVQ 236

Query: 437 IPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IPV F ++++I    ++           W  DL  +DP                     I
Sbjct: 237 IPVGFGMFRLIRGMADLPVPSMETGGALWFNDLTVSDPLF-------------------I 277

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-----PVVFVFALSSFPAGLIIYWSWSNV 547
            PI+ +  M   M++  P     Q   +  M     P+         PAGL +Y++ S  
Sbjct: 278 LPIVGAGLMIASMRVPLPYMASSQQGTMKIMTMVAAPITLGV-SIFLPAGLQLYFAISTF 336

Query: 548 ISIVQQAVIM-----KMHGAEIGLID 568
           +   QQ +       KM G    +  
Sbjct: 337 LQFGQQWLTYQNWFRKMIGLRPVVFG 362


>gi|224087219|ref|XP_002308102.1| inner membrane protein [Populus trichocarpa]
 gi|222854078|gb|EEE91625.1| inner membrane protein [Populus trichocarpa]
          Length = 427

 Score = 87.4 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 98/256 (38%), Gaps = 22/256 (8%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIA 363
           +    A A +   +       A    E+ I     Y     +  ++   +N  G N+  +
Sbjct: 86  STTTTAAADKINVVMDTVAQAAPAANEVAIAAADSYLPVAALQYVIDAVHNFTGLNWWAS 145

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK-----FKQSPPQVLQKAMIQL 418
           +++TT+ ++    PL   Q  +T+ +  ++P ++E++++        +     QK M +L
Sbjct: 146 MVVTTLLIRSAMLPLLINQLKATSKLSILRPHLEEVKQRVDCQVMDPTAVSEGQKEMQKL 205

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLE---MRHAPFWGWIKDLAAADPTNIFT 475
           +K H ++P      I +Q PVF + +  IS   E      +    W  DL   D   IF 
Sbjct: 206 FKEHGVSPFTPLKGIFIQGPVFISFFLAISNMAEKVPSFKSGGAYWFVDLTTPDGLYIFP 265

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
                         +     ++++    Q  M   PA      +   + V  V    +FP
Sbjct: 266 -------------VLTALTFLLTVECNTQEGMEGNPAAGTMKNVSRALAVASVPLTMNFP 312

Query: 536 AGLIIYWSWSNVISIV 551
             +  YW  SN+ S+ 
Sbjct: 313 KAVFCYWVTSNLFSLA 328


>gi|322377609|ref|ZP_08052099.1| SpoIIIJ family protein [Streptococcus sp. M334]
 gi|321281374|gb|EFX58384.1| SpoIIIJ family protein [Streptococcus sp. M334]
          Length = 308

 Score = 87.4 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 73/212 (34%), Gaps = 30/212 (14%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432
            +          A    ++P    L+E   Q      Q+A+    K H I+     GC+P
Sbjct: 83  SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           ILLQ+P F AIY     +  +  A + G    L +     +    G+L +        G+
Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG--IPLGSP-SMILVACAGVLYYLQSLLSLHGV 199

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
                               D+ Q      +    P+  V      PA + +YW     +
Sbjct: 200 -------------------EDETQREQIKKMAYVSPITIVVFSLISPASVTLYWVVGGFM 240

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            I+QQ ++   +     L  ++R   +KN   
Sbjct: 241 MILQQFIVN--YIVRPKLRKKVREELAKNPPK 270


>gi|328873194|gb|EGG21561.1| putative oxidase assembly protein [Dictyostelium fasciculatum]
          Length = 422

 Score = 87.0 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 89/235 (37%), Gaps = 32/235 (13%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
             F    +  + ++  +    + + I   TV ++ L  PL  KQ  S A M  ++ ++++
Sbjct: 146 SNFNTGIVESINNFSISSGCPWWLCIAGMTVGLRFLILPLTVKQQRSAAAMALVKEEMEK 205

Query: 399 LREKFKQSPPQVLQ--KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS----LE 452
                  +    ++      ++   H ++P+   +  L Q P +  ++ +I  +     +
Sbjct: 206 HSYLNDGTTEGKMKLFTLQREISVKHGVSPMKLLFVGLAQAPAYIYLFYIIRSACVDFPQ 265

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
                   W  +L+  DP                   V   PII SL  +  M++S    
Sbjct: 266 FVTNGGLLWFPNLSIVDPY------------------VYALPIISSLFQWTSMRLSFTET 307

Query: 513 DKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                 I    L  +P+   +    FPAGL +YW  ++++ +VQ   I K    +
Sbjct: 308 TPLIMKIVFGGLCILPL---YFTLDFPAGLNLYWCINSLLFVVQNY-IFKKPAVK 358


>gi|290581139|ref|YP_003485531.1| hypothetical protein SmuNN2025_1613 [Streptococcus mutans NN2025]
 gi|254998038|dbj|BAH88639.1| conserved hypothetical protein [Streptococcus mutans NN2025]
          Length = 271

 Score = 87.0 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 87/199 (43%), Gaps = 29/199 (14%)

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTH 422
           L T  ++ +  PL   Q  S   M+ +QP++  L+ K+          + +   +LYK +
Sbjct: 60  LFTFLIRTILLPLFNLQLKSGQKMQELQPELKALQTKYPGKDRESRMRMAEESQELYKKY 119

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
            +NP A  +P+L+Q+PV +A+Y+ ++  +E      + W+ D+   DP            
Sbjct: 120 GVNPYASLFPLLIQMPVLWALYQALTR-VEFLKTGSFLWM-DIGDKDPYF---------- 167

Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA----LSSFPAGL 538
                    I P++ ++  F+   ++   A K +  ++  M ++          +  +G+
Sbjct: 168 ---------ILPVLAAIFTFLSSWLTNKAA-KERNGMMITMNIILPIFILLIGFNLASGV 217

Query: 539 IIYWSWSNVISIVQQAVIM 557
            +YW  SN   + Q  ++ 
Sbjct: 218 ALYWVVSNAYQVFQILLLN 236


>gi|242792517|ref|XP_002481970.1| mitochondrial export translocase Oxa1, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218718558|gb|EED17978.1| mitochondrial export translocase Oxa1, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 527

 Score = 87.0 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 104/293 (35%), Gaps = 54/293 (18%)

Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLL 374
             +   +       +   +   + +  +  M  L+ + +   G    A I    +  ++ 
Sbjct: 114 SQLPAIDGIPEKIGYLKELGLDYGWGPSAFMEWLIEHIHIWSGIPWWASIAAAALVTRIA 173

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA-------MIQLYKTHNINPL 427
            F  + K   + A    I+ +  ELR++  Q   Q  Q         M +LY+ H+I   
Sbjct: 174 LFHPSLKAADNAAKTGPIKDEAMELRKQRMQMLSQGRQLEAAKAKLAMDELYQKHDIKLW 233

Query: 428 AGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
                 LLQIP+ F  ++V+     +          GW+ DL + DP             
Sbjct: 234 RNFV-PLLQIPLGFGTFRVVRGMATLPVPALAMEHCGWVHDLTSYDPLY----------- 281

Query: 484 LPGFMHVGIWPIIMSLSMFIQMK------MSPPPADKGQAMILNWMPVVFVFALSSFPAG 537
                   I P + + +M+  MK      +S   +      +   +P + +  ++  PAG
Sbjct: 282 --------ILPALATGAMYFTMKKGVDSGLSGTGSTALGRGLTIGLPAISLLFIAWQPAG 333

Query: 538 LIIYWSWSNVISIVQQAV----IMKM------------HGAEIGLIDRLRSTF 574
           L +Y++ S + S+ Q  +    I +             +G +   +  ++  F
Sbjct: 334 LQLYFAASGLFSLGQAYLFNTPITRKLLGIAPIYKPPANGEKQDSLRMIQQEF 386


>gi|156554266|ref|XP_001603843.1| PREDICTED: similar to cytochrome oxidase biogenesis protein (oxa1
           mitochondrial) [Nasonia vitripennis]
          Length = 436

 Score = 87.0 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 86/229 (37%), Gaps = 35/229 (15%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +  A  +   + + +  V       I++TT+ V+ L  P+  K     A M NIQP+I  
Sbjct: 134 WSPAGLVQQYLDFLHVSVDLPWWATILITTMCVRTLLLPVVIKIQRFAARMHNIQPQIQY 193

Query: 399 LREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---- 447
           L+ +  ++           L   + +  K   ++P+      LLQ PVF + +  +    
Sbjct: 194 LQSQLSEARKMGDRLEAARLSHELYEFMKQKGVSPIKNAALPLLQAPVFLSFFWALKGMV 253

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
              +E        W  DL   DP                     + PII S+++   ++M
Sbjct: 254 QAPVESMKEGGLWWFTDLTVPDPYY-------------------LLPIITSMTLAATIEM 294

Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
                      ++ ++    P +    +  F   ++ YW  +N+ S+VQ
Sbjct: 295 GTDAVRVQSLGLMRYVIRASPYIMFPFIMKFEGAILCYWVSTNMFSLVQ 343


>gi|115252808|emb|CAK98244.1| conserved hypothetical transmembrane protein [Spiroplasma citri]
          Length = 426

 Score = 87.0 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 17/235 (7%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI---MLTTVFVKLLFFPLAKKQYVSTANM 389
              +G F F    + + + Y +  + N    I    LT++ V+L+    + K   +   M
Sbjct: 112 SPFYGCFVFPVAWILVNLIYGFGGLDNGAGIIGALFLTSLIVRLITLMFSWKAQRNQDKM 171

Query: 390 KNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + +Q K  E++ K+K S      Q  Q  M+QLY+   ++PL+      L IP   A+Y 
Sbjct: 172 QLMQIKQAEIQAKYKDSKDPAAKQKQQMEMMQLYRKEGVSPLSTIGSSFLSIPFLIAMYT 231

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
           V+  + E++ A     I  ++  +        G   +    F+++ I  + M L   + +
Sbjct: 232 VVRATRELKMAT----IGQISLIEKPWDMITSGNYVYLALLFVYLPIQILSMILPTILNL 287

Query: 506 KMS------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           + +         A K Q ++   M VVF     S  +G+ IYW +S  I I+Q  
Sbjct: 288 RKTRVITKEQKKARKRQFIMQGVMIVVFFVVTISIASGVAIYWIFSAFIQILQTL 342


>gi|19554125|ref|NP_602127.1| putative inner membrane protein translocase component YidC
           [Corynebacterium glutamicum ATCC 13032]
 gi|62391778|ref|YP_227180.1| inner membrane protein translocase component YidC [Corynebacterium
           glutamicum ATCC 13032]
 gi|38503052|sp|Q8NLK2|OXAA_CORGL RecName: Full=Membrane protein oxaA
 gi|41327120|emb|CAF20964.1| putative preprotein translocase subunit YidC, SpoIIIJ homolog
           [Corynebacterium glutamicum ATCC 13032]
          Length = 422

 Score = 87.0 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 55/284 (19%), Positives = 104/284 (36%), Gaps = 50/284 (17%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
               +  P+  +M  ++ L+ N         +  ++    + ++ +  P   + Y S   
Sbjct: 1   MLDILIYPVSGVMKLWHLLLHNVAGLDDSLAWFFSLFGLVITIRAIIAPFTWQMYKSGRT 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIY 444
             +I+P    LRE++K    +   + + +    L K + INPLAGC P L+QIP+   +Y
Sbjct: 61  AAHIRPHRAALREEYKGKYDEASIRELQKRQNDLNKEYGINPLAGCVPGLIQIPIVLGLY 120

Query: 445 KVISISLEMRHA---PFWGWIKDLA--------------AADPTNIF-----------TL 476
             +            P +  I  L                  P  +            T 
Sbjct: 121 WALLRMARPEGGLENPVFQSIGFLTPEEVESFLAGRVSNVPLPAYVSMPTEQLKYLSTTQ 180

Query: 477 FGILPFYLPGFMHVGIWPII-MSLSMF--IQMKMSPPPADKGQAMILNWMPVVFVFA--- 530
             +L F LP F+   I   I M++SM+   Q          G    +  M ++       
Sbjct: 181 AEVLSFVLPLFITAAILTAINMAMSMYRSFQTNDYASGFSNGMLKFMIVMSILAPIFPLS 240

Query: 531 ---LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
                 FP  + +YW  +N+ +++Q  ++M +   +  L D  +
Sbjct: 241 LGLTGPFPTAIALYWVSNNLWTLLQTIIMMVILERKYPLTDDFK 284


>gi|328956378|ref|YP_004373711.1| membrane protein insertase, YidC/Oxa1 family [Coriobacterium
           glomerans PW2]
 gi|328456702|gb|AEB07896.1| membrane protein insertase, YidC/Oxa1 family [Coriobacterium
           glomerans PW2]
          Length = 260

 Score = 87.0 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 114/238 (47%), Gaps = 9/238 (3%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            + +I   +F ++ +  +L G++G+++++ T+ V+L+  P+  K   STA M+  QPK++
Sbjct: 1   MWDWIVNILFQILKFIQSLAGDWGLSVIILTLIVRLVLAPVLLKSTKSTARMQVYQPKME 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI------SISL 451
           E+++K+    PQ  Q+ + + Y  ++ NPL GC P+LLQ+P+  A++ ++          
Sbjct: 61  EIKQKYAD-DPQRQQQEIQKFYAENHFNPLGGCMPLLLQMPIMIALFTLLKSLPTYFPDF 119

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           +     F+  + DL  +   +     G      P  + + ++ ++  +      K     
Sbjct: 120 DKGSFSFYNLLPDLTTSPSASFAQ--GGASGAAPYLVILVLFGLLSLIPQLYMAKNQTGS 177

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
             +   M+   M VV ++   + PAG+++Y+  S+    VQQ  + +         + 
Sbjct: 178 QAQSMKMMSVVMAVVMLWFGWALPAGVLLYYDVSSAWQTVQQIFVTQKILERTKAEEE 235


>gi|145296949|ref|YP_001139770.1| putative inner membrane protein translocase component YidC
           [Corynebacterium glutamicum R]
 gi|140846869|dbj|BAF55868.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 422

 Score = 87.0 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 55/284 (19%), Positives = 104/284 (36%), Gaps = 50/284 (17%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
               +  P+  +M  ++ L+ N         +  ++    + ++ +  P   + Y S   
Sbjct: 1   MLDILIYPVSGVMKLWHLLLHNVAGLDDSLAWFFSLFGLVITIRAIIAPFTWQMYKSGRT 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIY 444
             +I+P    LRE++K    +   + + +    L K + INPLAGC P L+QIP+   +Y
Sbjct: 61  AAHIRPHRAALREEYKGKYDEASIRELQKRQNDLNKEYGINPLAGCVPGLIQIPIVLGLY 120

Query: 445 KVISISLEMRHA---PFWGWIKDLA--------------AADPTNIF-----------TL 476
             +            P +  I  L                  P  +            T 
Sbjct: 121 WALLRMARPEGGLENPVFQSIGFLTPEEVESFLAGRVSNVPLPAYVSMPTEQLEYLSTTQ 180

Query: 477 FGILPFYLPGFMHVGIWPII-MSLSMF--IQMKMSPPPADKGQAMILNWMPVVFVFA--- 530
             +L F LP F+   I   I M++SM+   Q          G    +  M ++       
Sbjct: 181 AEVLNFVLPLFITAAILTAINMAMSMYRSFQTNDYASGFSNGMLKFMIVMSILAPIFPLS 240

Query: 531 ---LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
                 FP  + +YW  +N+ +++Q  ++M +   +  L D  +
Sbjct: 241 LGLTGPFPTAIALYWVSNNLWTLLQTIIMMVILERKYPLTDDFK 284


>gi|161510304|ref|YP_001575963.1| hypothetical protein USA300HOU_2087 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|160369113|gb|ABX30084.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
          Length = 251

 Score = 87.0 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 93/232 (40%), Gaps = 33/232 (14%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ--------SP 407
           L  N+G+AI++  + ++++  P     Y ++  M+          EK ++          
Sbjct: 13  LNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKVAKPEVEKIQEKVKRARTQEE 72

Query: 408 PQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIYKVI--SISLEMRHAPFWGWI 462
                + ++Q+YK +++NP   + GC P+L+Q+P+   +Y V+   +   +   P + W 
Sbjct: 73  KMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLYFVLKDQLVDGLFKYPHFLWF 132

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
            DL   D                      I  ++  +  ++  K  P    +   M++  
Sbjct: 133 -DLGRPD-----------------IWITIIAGVLYFIQAYVSSKTMPDEQRQMGYMMMVI 174

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMHGAEIGLIDRLRS 572
            P++ ++   S  + L +YWS S    +VQ     I     A+  +   + +
Sbjct: 175 SPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEKVAKKEVQPFIEA 226


>gi|19112969|ref|NP_596177.1| mitochondrial inner membrane translocase Oxa102
           [Schizosaccharomyces pombe 972h-]
 gi|13124377|sp|O43092|OXA12_SCHPO RecName: Full=Mitochondrial inner membrane protein oxa1-2; AltName:
           Full=Cytochrome oxidase biogenesis protein 1-2;
           Short=Sp2; Flags: Precursor
 gi|7363180|emb|CAB83161.1| mitochondrial inner membrane translocase Oxa102
           [Schizosaccharomyces pombe]
          Length = 409

 Score = 87.0 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 84/219 (38%), Gaps = 36/219 (16%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
                +  +I    V +++  FP+  K   ++A +  I PK+ E      ++  +   + 
Sbjct: 110 WSGLPWWASIAACAVAMRIAVFPIMLKMMKTSAKLAIINPKVAEHMSVLSKAKAEGNSEL 169

Query: 415 MIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMRHAPFWGWIK 463
           M+Q       LYK +N+NPL      + Q  +F + +  +     + +E      + W+ 
Sbjct: 170 MMQATTQIQNLYKVNNVNPLNLLSAPVFQGILFISFFYALKTMAGVPVEGFTDGGFWWVN 229

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM------SPPPADKGQA 517
           DL+  DP +IF                   P+   L M + +++      +         
Sbjct: 230 DLSQPDPLHIF-------------------PVANGLLMLLNIELGSETGSNKVAMSPSMK 270

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
               ++ +       +FP  + +YW  SNV S+ Q A +
Sbjct: 271 KFFRFLCLASPLFTMNFPMAIFMYWFPSNVFSVFQGAFL 309


>gi|108705853|gb|ABF93648.1| 60Kd inner membrane protein, expressed [Oryza sativa Japonica
           Group]
          Length = 436

 Score = 86.6 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 87/263 (33%), Gaps = 50/263 (19%)

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            P          F  +A    ++         N+   I LT++ ++ L  PL   Q  +T
Sbjct: 124 FPGEVAAAAADSFAPVAALQHLIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQMKAT 183

Query: 387 ANMKNIQPKIDELRE--------------KFKQSPPQVLQKAMI--------QLYKTHNI 424
           A    I+    E+R               +             +        +L+  H +
Sbjct: 184 AMRPEIEAINLEMRTISSTRIAGNEKSSTRVTDEGSMSTDPQSMLEGKRKLGELFLRHGV 243

Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLE---MRHAPFWGWIKDLAAADPTNIFTLFGILP 481
            PL     + +Q P+F + +  IS  +E           W  DL   D            
Sbjct: 244 TPLTPLKGLFIQAPIFMSFFFAISNMVEKVPSFKGGGIYWFTDLTTPD------------ 291

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNW---MPVVFVFALSSFP 535
                   + I P++ SL+  + ++++       +     + N+   M V+ +    SFP
Sbjct: 292 -------ELLILPMLTSLTFLVTVELNMQDGMEGNPMLKTMKNFSRVMAVLTIPFTMSFP 344

Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558
             +  YW  SN+ S+    V+ K
Sbjct: 345 KAIFFYWVTSNLFSLGYGFVLRK 367


>gi|323351007|ref|ZP_08086664.1| SpoIIIJ family protein [Streptococcus sanguinis VMC66]
 gi|322122731|gb|EFX94440.1| SpoIIIJ family protein [Streptococcus sanguinis VMC66]
          Length = 307

 Score = 86.6 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391
             W          +  +  N    +G+AI++ T+ V+++        + K  + +  M  
Sbjct: 35  LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
            +P    ++++ K +  Q      Q+ ++   K + ++     GC P+L+Q+P F A++ 
Sbjct: 95  FKPIFAPIQDRIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  +  + WIKDLA +D                          I+ +  +IQ 
Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------WALTAIVGILYYIQS 192

Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            +S     D+ Q   +    +M P++ V      PA + +YW     I I+     +  +
Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINY 250

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
                L  ++   F KN   
Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270


>gi|2739285|emb|CAA63844.1| oxa1Sp2 [Schizosaccharomyces pombe]
          Length = 409

 Score = 86.6 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 84/219 (38%), Gaps = 36/219 (16%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
                +  +I    V +++  FP+  K   ++A +  I PK+ E      ++  +   + 
Sbjct: 110 WSGLPWWASIAACAVAMRIAVFPIMLKMMKTSAKLAIINPKVAEHMSVLSKAKAEGNSEL 169

Query: 415 MIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMRHAPFWGWIK 463
           M+Q       LYK +N+NPL      + Q  +F + +  +     + +E      + W+ 
Sbjct: 170 MMQATTQIQNLYKVNNVNPLNLLSAPVFQGILFISFFYALKTMAGVPVEGFTDGGFWWVN 229

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM------SPPPADKGQA 517
           DL+  DP +IF                   P+   L M + +++      +         
Sbjct: 230 DLSQPDPLHIF-------------------PVANGLLMLLNIELGSETGSNKVAMSPSMK 270

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
               ++ +       +FP  + +YW  SNV S+ Q A +
Sbjct: 271 KFFRFLCLASPLFTMNFPMAIFMYWFPSNVFSVFQGAFL 309


>gi|314934160|ref|ZP_07841521.1| putative lipoprotein [Staphylococcus caprae C87]
 gi|313653065|gb|EFS16826.1| putative lipoprotein [Staphylococcus caprae C87]
          Length = 290

 Score = 86.6 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 105/260 (40%), Gaps = 35/260 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394
           +F    +PM  L+ +  N V N  +G+AI++  + ++L+  P     Y ++  M+     
Sbjct: 32  FFNTFVQPMKHLLQWLGNDVFNNDYGLAIIILVLVIRLILLPFMLSNYKNSHMMREKMKV 91

Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + ++++YK +++NP+    GC P+L+Q+P+   +Y
Sbjct: 92  AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIMGLY 151

Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   L   +   P + W  +L   D                      I  ++  +  +
Sbjct: 152 FVLKDKLVNGLSDHPHFLWF-NLTKPD-----------------IWITIIAGVLYFVQAY 193

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG- 561
           +  K  P    +   M++   P++ ++      + L +YWS S +  ++Q       +  
Sbjct: 194 VSSKTMPQEQRQMGYMMMIVSPIMIIWISLQASSALGLYWSVSALFLVIQTHFANLYYSK 253

Query: 562 -AEIGLIDRLRSTFSKNYNS 580
            A+  +   +     ++  S
Sbjct: 254 LAKKEVQPFIEQYEKEHNPS 273


>gi|313887656|ref|ZP_07821338.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312846265|gb|EFR33644.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 244

 Score = 86.6 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 21/232 (9%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            +  FI   +  +M      +  F ++I++ TV +KLL  PL   Q  +   M  +QP++
Sbjct: 10  TFVKFIYDGLAAIMPQEPAAISFFALSIIIATVIIKLLILPLNISQMKNQKKMAKLQPEL 69

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
            +++ K+K   PQ L     +LYK +N N + GC P++L + V  A Y+V          
Sbjct: 70  KKIQTKYKN-DPQTLAAKQQKLYKDNNYNMVGGCLPMVLTMVVLIAFYRVFLN------- 121

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI---QMKMSPPP-- 511
           P      D                   +       I P+I ++S F+       +P    
Sbjct: 122 PQTFAFTD---PGFYEAMNKNFFYIKNIDHADKTLIMPVIAAVSTFLVSFITTKNPATQG 178

Query: 512 ADKGQAMILNWM-----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           A   QA  +        P++       + AGL+IYW  SN+ SIVQQ +  K
Sbjct: 179 AGADQAKSMMSTMMVVMPILIFSMARKYAAGLVIYWIVSNIFSIVQQLITNK 230


>gi|332359134|gb|EGJ36955.1| SpoIIIJ family protein [Streptococcus sanguinis SK49]
          Length = 296

 Score = 86.6 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 39/260 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391
             W          +  +  N    +G+AI++ T+ V+++        + K  + +  M  
Sbjct: 24  LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 83

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445
            +P    ++E+ K +  Q      Q+ +I   K + ++     GC P+L+Q+P F A++ 
Sbjct: 84  FKPIFAPIQERIKNAETQEEKMQAQQELIAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 143

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  +  + WIKDLA +D                          I+ +  +IQ 
Sbjct: 144 AAQYTQGVAGSS-FLWIKDLAKSD---------------------WALTAIVGILYYIQS 181

Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            +S     D+ Q   +    +M P++ V      PA + +YW     I I+     +  +
Sbjct: 182 VLSLHGIEDETQRNSMKQASYMSPIMIVAFSFLSPAAVTLYWVVGGFIQII--QQFIINY 239

Query: 561 GAEIGLIDRLRSTFSKNYNS 580
                L  ++   F KN   
Sbjct: 240 IIRPRLRKQVAEEFEKNPPK 259


>gi|313889769|ref|ZP_07823411.1| putative stage III sporulation protein J [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313121814|gb|EFR44911.1| putative stage III sporulation protein J [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 270

 Score = 86.6 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 104/233 (44%), Gaps = 27/233 (11%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           ++       +      F     + +  G+ G+ I+L T+ ++LL  PL   Q  S+  M+
Sbjct: 24  DISAHSASGWDQLVYFFAKSVQWLSFNGSIGLGIILFTLLIRLLLMPLFNIQIKSSQKMQ 83

Query: 391 NIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           ++QP++ +++ K+     +           LYK++ +NP A  +P+++Q+P+  A+++ +
Sbjct: 84  DLQPELKKIQAKYPGKDSESRMALADETQALYKSNGVNPYASLFPLIIQMPIMIALFQAL 143

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +    ++    + W  +LA  D                   H+ I PI+ +L  F+   +
Sbjct: 144 TRVPFLK-TGTFLW-TELAQHD-------------------HLYILPILAALFTFLSSWL 182

Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +   A   +    ++   MP++  F      +G+++YW  SN   + Q  ++ 
Sbjct: 183 TNLAAKEKNMVMTVMTYMMPLMIFFMGFKLASGVVLYWVISNAFQVFQLLLLN 235


>gi|302408627|ref|XP_003002148.1| mitochondrial export translocase Oxa1 [Verticillium albo-atrum
           VaMs.102]
 gi|261359069|gb|EEY21497.1| mitochondrial export translocase Oxa1 [Verticillium albo-atrum
           VaMs.102]
          Length = 497

 Score = 86.6 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 85/242 (35%), Gaps = 38/242 (15%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF-PLAKKQYVSTANMK 390
             I   + Y  +  M  ++ + Y   G    A + +TV +  L            +A M+
Sbjct: 158 KAIGLDFGYGPSSCMQWILEHVYIYTGMPWWATIGSTVLLLRLLLLKPTLNAQQGSAKMQ 217

Query: 391 NIQP--KIDELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFF 441
            +Q   +   L++K + S     + AM+        ++K   +NP A     L+QIP  +
Sbjct: 218 QLQGNAQYAALKQKMQDSMKSGDKSAMMDARQSINHIHKREGVNPFAA-LWGLVQIPFSY 276

Query: 442 AIYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
            ++ V++      +         W  DL+ +DP                     I P+  
Sbjct: 277 GLFIVLNNMAKIPVPSLENGGLLWFNDLSVSDPFF-------------------ILPVAA 317

Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVF----VFALSSFPAGLIIYWSWSNVISIVQQ 553
            ++M   +K     A   Q   +  M  +F    +      PA +  Y+  S ++   Q 
Sbjct: 318 PIAMIAMLKSGTKFAPVQQQAQMKLMMYIFVPLSLIFTIWLPAAVQFYFLCSTLVGWGQN 377

Query: 554 AV 555
            +
Sbjct: 378 LL 379


>gi|256545946|ref|ZP_05473301.1| sporulation associated-membrane protein [Anaerococcus vaginalis
           ATCC 51170]
 gi|256398368|gb|EEU11990.1| sporulation associated-membrane protein [Anaerococcus vaginalis
           ATCC 51170]
          Length = 252

 Score = 86.6 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 40/239 (16%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           + I+I+L TV V L+  P+   Q    A    IQPK++E+++K+    PQ++Q+ M QLY
Sbjct: 33  YAISIILMTVLVSLITIPMTMNQQKQAAKSGEIQPKVEEIKKKYA-YDPQIMQQKMQQLY 91

Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISI------SLEMRH-APFWGWIKDLAAADPT 471
           K   + P ++ C  ++ Q+ +  ++Y+VI        + EM      + W+  L+ ADP 
Sbjct: 92  KEEGVGPGISSCLVMIFQLLILLSLYRVIQNPNKFIFAGEMHQVKDNFLWVPTLSKADPL 151

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMF----IQMKMSP------PPADKGQAMILN 521
                                 P++ S+S        MK SP       P       +L 
Sbjct: 152 FYG------------------LPLLTSISQLGVQLFTMKTSPQGQAQNTPGMGSMNNMLL 193

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ---QAVIMKMHGAEIGLIDRLRSTFSKN 577
            MPV++ F   + PAGL +YW+ S++  ++    Q ++      +    +++ S  SKN
Sbjct: 194 AMPVIYYFVFRNLPAGLPLYWTTSSLARLLILGGQYLVGLSKRDKEEKDEKINSKNSKN 252


>gi|223043994|ref|ZP_03614035.1| membrane protein OxaA 2 [Staphylococcus capitis SK14]
 gi|222442709|gb|EEE48813.1| membrane protein OxaA 2 [Staphylococcus capitis SK14]
          Length = 290

 Score = 86.6 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 105/260 (40%), Gaps = 35/260 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394
           +F    +PM  L+ +  N V N  +G+AI++  + ++L+  P     Y ++  M+     
Sbjct: 32  FFNTFVQPMKHLLQWLGNDVFNNDYGLAIIILVLVIRLILLPFMLSNYKNSHMMREKMKV 91

Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444
                    ++++    Q       + ++++YK +++NP+    GC P+L+Q+P+   +Y
Sbjct: 92  AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIMGLY 151

Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   L   +   P + W  +L   D                      I  ++  +  +
Sbjct: 152 FVLKDKLVNGLSDHPHFLWF-NLTKPD-----------------IWITIIAGVLYFVQAY 193

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG- 561
           +  K  P    +   M++   P++ ++      + L +YWS S +  ++Q       +  
Sbjct: 194 VSSKTMPQEQRQMGYMMMIVSPIMIIWISLQASSALGLYWSVSALFLVIQTHFANMYYSK 253

Query: 562 -AEIGLIDRLRSTFSKNYNS 580
            A+  +   +     ++  S
Sbjct: 254 LAKKEVQPFIEQYEKEHNPS 273


>gi|24378835|ref|NP_720790.1| hypothetical protein SMU.337 [Streptococcus mutans UA159]
 gi|38503009|sp|Q8DVX3|OXAA1_STRMU RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|24376711|gb|AAN58096.1|AE014881_10 conserved hypothetical protein; putative membrane protein
           [Streptococcus mutans UA159]
          Length = 271

 Score = 86.6 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 87/199 (43%), Gaps = 29/199 (14%)

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTH 422
           L T  ++ +  PL   Q  S   M+ +QP++  L+ K+          + +   +LYK +
Sbjct: 60  LFTFLIRTILLPLFNLQLKSGQKMQELQPELKALQTKYPGKDRESRMRMAEESQELYKKY 119

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
            +NP A  +P+L+Q+PV +A+Y+ ++  +E      + W+ D+   DP            
Sbjct: 120 GVNPYASLFPLLIQMPVLWALYQALTR-VEFLKTGSFLWM-DIGNKDPYF---------- 167

Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA----LSSFPAGL 538
                    I P++ ++  F+   ++   A K +  ++  M ++          +  +G+
Sbjct: 168 ---------ILPVLAAIFTFLSSWLTNKAA-KERNGMMITMNIILPIFILLIGFNLASGV 217

Query: 539 IIYWSWSNVISIVQQAVIM 557
            +YW  SN   + Q  ++ 
Sbjct: 218 ALYWVVSNAYQVFQILLLN 236


>gi|293376115|ref|ZP_06622365.1| putative stage III sporulation protein J [Turicibacter sanguinis
           PC909]
 gi|325845257|ref|ZP_08168561.1| putative stage III sporulation protein J [Turicibacter sp. HGF1]
 gi|292645269|gb|EFF63329.1| putative stage III sporulation protein J [Turicibacter sanguinis
           PC909]
 gi|325488698|gb|EGC91103.1| putative stage III sporulation protein J [Turicibacter sp. HGF1]
          Length = 261

 Score = 86.2 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 31/237 (13%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           F+      +   +  L  N G AI+L T  ++L+  PL  K   S A M+ IQP++ +++
Sbjct: 41  FVLPLATFITFLYNILSQNLGFAIILATAIIRLILMPLYSKSNKSMAVMQEIQPEMQKIQ 100

Query: 401 EKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +K++    Q     +Q  M+ LYK +N NP+ GC    LQ+PVF A Y+ IS     RH 
Sbjct: 101 KKYENKKDQASQAKMQTEMMDLYKKYNYNPMMGCILPFLQMPVFLAFYQAIS-----RH- 154

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM------SPP 510
                IKD AAA+       F  +     G M   I   I++    +  +M      S  
Sbjct: 155 ---PLIKDAAAAE-------FFGINLGATGTMPNYILAFIVAGLTILSQRMMNKNMASSA 204

Query: 511 PADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
             ++   M++  M    P          P    +Y+    +++IVQ  +I K   A+
Sbjct: 205 QQNQTSNMMMKVMTYYFPFAMFSITIGTPFAFGLYFLTGQIMTIVQ-YLIFKKPQAK 260


>gi|293380720|ref|ZP_06626768.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus
           crispatus 214-1]
 gi|290922684|gb|EFD99638.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus
           crispatus 214-1]
          Length = 321

 Score = 86.2 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 79/211 (37%), Gaps = 32/211 (15%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCW 431
                ++Q         ++   + +R K      Q+       +LY  + ++     GC 
Sbjct: 90  QNKSVRQQEKMARLQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCL 149

Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491
           P+++Q+P+ + IY+ +  S ++  + F+G    L++                        
Sbjct: 150 PLIIQLPIMWGIYQAVFYSPQLAQSKFFG--ISLSSK---------------------SV 186

Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNV 547
           +  II ++   IQ  +S     + Q   +  M    P++ +F   SF   L +YW+ SN+
Sbjct: 187 VLAIIATVFTVIQGYISLIGIPEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAASNL 246

Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           + IVQQ ++         +   +        
Sbjct: 247 VMIVQQVIVT--FVLTPSVKKHIADELKDKP 275


>gi|121718317|ref|XP_001276169.1| mitochondrial export translocase Oxa1, putative [Aspergillus
           clavatus NRRL 1]
 gi|119404367|gb|EAW14743.1| mitochondrial export translocase Oxa1, putative [Aspergillus
           clavatus NRRL 1]
          Length = 434

 Score = 86.2 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 88/237 (37%), Gaps = 38/237 (16%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           +   + +  +  +   + + +   G    A I+ T + ++   F        ++  + N+
Sbjct: 48  MGLDYGWGPSSVIEFFIEHLHIWGGLPWWASIVGTGLLLRAALFVPTLGAADTSTKITNL 107

Query: 393 QPKIDELREKFK-------QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           +P  + LR++          +    L+  M +++  H +       P+L QIP  F  Y+
Sbjct: 108 RPITEPLRQQMMQLGGQGNHAEMYKLRAEMQRVHHQHGVKTWKTFIPML-QIPFGFGCYR 166

Query: 446 VISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501
           V+     M          GW++DL  ADP                     + P++ SL M
Sbjct: 167 VVQGMTAMPVPGLALESVGWLRDLTVADPYF-------------------VLPVLSSLCM 207

Query: 502 FIQMKM------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           ++ ++       +         + L  MP +    ++ FP  L +Y+  + +  + Q
Sbjct: 208 YLSLRKGGENGVNQLQGTAFGRLFLYGMPGISFLFMAFFPGALQLYFVATGLFGLGQ 264


>gi|282917439|ref|ZP_06325192.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus D139]
 gi|282318641|gb|EFB48998.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus D139]
          Length = 207

 Score = 86.2 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 77/200 (38%), Gaps = 25/200 (12%)

Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQ 436
             +         ++   ++++    Q       + ++Q+YK +++NP   + GC P+L+Q
Sbjct: 1   MMRQKMKVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQ 60

Query: 437 IPVFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +P+   +Y V+   +   +   P + W  DL   D                      I  
Sbjct: 61  LPIIMGLYFVLKDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAG 102

Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           ++  +  ++  K  P    +   M++   P++ ++   S  + L +YWS S    +VQ  
Sbjct: 103 VLYFIQAYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTH 162

Query: 555 V--IMKMHGAEIGLIDRLRS 572
              I     A+  +   + +
Sbjct: 163 FANIYYEKVAKKEVQPFIEA 182


>gi|212697392|ref|ZP_03305520.1| hypothetical protein ANHYDRO_01962 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675584|gb|EEB35191.1| hypothetical protein ANHYDRO_01962 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 252

 Score = 86.2 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 40/239 (16%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           + I+I+L TV V L+  P+   Q    A    IQPKI+E+++K+    PQ++Q+ M QLY
Sbjct: 33  YAISIILMTVLVSLITIPMTMNQQKQAAKSGEIQPKIEEIKKKYA-YDPQIMQQKMQQLY 91

Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISISL-------EMRHAPFWGWIKDLAAADPT 471
           K   + P L+ C  ++ Q+ +  ++Y+VI             +    + W+  L+ ADP 
Sbjct: 92  KEEGVGPGLSSCLVMIFQLLILLSLYRVIQSPDKYIFQGSMHQVKDNFLWVPTLSKADPL 151

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM----------ILN 521
                                 P++ S+S       +   + + QA           +L 
Sbjct: 152 FYG------------------LPLLTSISQLAVQVFTMKTSPQSQAQNTPGMGSMNNMLM 193

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ---QAVIMKMHGAEIGLIDRLRSTFSKN 577
            MP+++ F   + PAGL +YW+ S++  ++    Q +I      +    +++ S  SKN
Sbjct: 194 IMPIIYYFVFRNLPAGLPLYWTTSSLARLIILGGQYLIGLSKRDKEEENEKINSKNSKN 252


>gi|300173702|ref|YP_003772868.1| membrane protein OxaA [Leuconostoc gasicomitatum LMG 18811]
 gi|299888081|emb|CBL92049.1| Membrane protein oxaA 2 precursor [Leuconostoc gasicomitatum LMG
           18811]
          Length = 305

 Score = 86.2 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 89/261 (34%), Gaps = 32/261 (12%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           E    + W           +++    V   G AI++ T  ++L+  P    Q V+T   +
Sbjct: 26  EHSKMYRWIGHPLANGMTDIAHIIGGVNGIGWAIIIITAILRLILLPFFLNQQVNTTINQ 85

Query: 391 NIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440
                +           R+       Q    AM+ LY+ ++++ + G     + +Q+P+F
Sbjct: 86  IKMQTLKPEIDKLQALTRKAGTTQEQQQASMAMMSLYRENDVSVIGGISFLTMAMQLPIF 145

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             +Y  I  +  ++ A                    F       P  +      +I  + 
Sbjct: 146 SGLYSAILHAPALKGAE-------------------FLGFNLGKPQIVFAIAAGVIYLIQ 186

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            ++ M+  P    K  AM++   P++           + +Y+    + +++Q  +    H
Sbjct: 187 AWLAMQHMPEEQKKTSAMMMFISPIMIFVFAMIASGAIGLYFVVGGLFALIQTLI---QH 243

Query: 561 GAEIGLIDRLRSTFSKNYNSQ 581
               GL  R+   F     + 
Sbjct: 244 YQRPGLEKRVVREFKIKKTAD 264


>gi|298695364|gb|ADI98586.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus
           subsp. aureus ED133]
          Length = 290

 Score = 86.2 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 101/252 (40%), Gaps = 35/252 (13%)

Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           ++     PM  ++ +  N  L  N+G+AI++  + ++++  P     Y ++  M+     
Sbjct: 32  FYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKV 91

Query: 396 IDELREKFKQ--------SPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIY 444
                EK ++               + +IQ+YK +++NP   + GC P+L+Q+P+   +Y
Sbjct: 92  AKPEVEKIQEKVKRARTQEEKMAANQELIQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLY 151

Query: 445 KVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            V+   +   +   P + W  DL   D                      I  ++  +  +
Sbjct: 152 FVLKDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAGVLYFIQAY 193

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMH 560
           +  K  P    +   M++   P++ ++   S  + L +YWS S    +VQ     I    
Sbjct: 194 VSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEK 253

Query: 561 GAEIGLIDRLRS 572
            A+  +   + +
Sbjct: 254 VAKKEVQPFIEA 265


>gi|312437493|gb|ADQ76564.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH60]
          Length = 202

 Score = 86.2 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 76/189 (40%), Gaps = 25/189 (13%)

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIYKVI 447
            ++   ++++    Q       + ++Q+YK +++NP   + GC P+L+Q+P+   +Y V+
Sbjct: 7   EVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLYFVL 66

Query: 448 --SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
              +   +   P + W  DL   D                      I  ++  +  ++  
Sbjct: 67  KDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAGVLYFIQAYVSS 108

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMHGAE 563
           K  P    +   M++   P++ ++   S  + L +YWS S    +VQ     I     A+
Sbjct: 109 KTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEKVAK 168

Query: 564 IGLIDRLRS 572
             +   + +
Sbjct: 169 KEVQPFIEA 177


>gi|227877759|ref|ZP_03995793.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           crispatus JV-V01]
 gi|256850088|ref|ZP_05555518.1| preprotein translocase subunit YidC [Lactobacillus crispatus
           MV-1A-US]
 gi|262047376|ref|ZP_06020333.1| preprotein translocase, YidC subunit [Lactobacillus crispatus
           MV-3A-US]
 gi|227862662|gb|EEJ70147.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           crispatus JV-V01]
 gi|256713060|gb|EEU28051.1| preprotein translocase subunit YidC [Lactobacillus crispatus
           MV-1A-US]
 gi|260572350|gb|EEX28913.1| preprotein translocase, YidC subunit [Lactobacillus crispatus
           MV-3A-US]
          Length = 321

 Score = 86.2 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 94/258 (36%), Gaps = 43/258 (16%)

Query: 339 FYFIAKPMFMLMSYFYNLV-------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           + ++ +P+  +M    +++           I  ++  V +  L      K       M  
Sbjct: 43  YQWLGRPLQNIMIQTAHMIGGDNGAGWGIVIITVVVRVILMPLMLVQQNKSVRQQEKMAR 102

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-------LAGCWPILLQIPVFFAIY 444
           +QP++  ++   +       Q+  +  ++    +          GC P+++Q+P+ + IY
Sbjct: 103 LQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCLPLIIQLPIMWGIY 162

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           + +  S ++  + F+G    L++                        +  II ++   IQ
Sbjct: 163 QAVFYSPQLAQSKFFG--ISLSSK---------------------SVVLAIIATVFTVIQ 199

Query: 505 MKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
             +S     + Q   +  M    P++ +F   SF   L +YW+  N++ IVQQ ++    
Sbjct: 200 GYISLIGIPEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIVQQVIVT--F 257

Query: 561 GAEIGLIDRLRSTFSKNY 578
                +   +        
Sbjct: 258 VLTPSVKKHIADELKDKP 275


>gi|295693356|ref|YP_003601966.1| preprotein translocase subunit yidc [Lactobacillus crispatus ST1]
 gi|295031462|emb|CBL50941.1| Preprotein translocase subunit YidC [Lactobacillus crispatus ST1]
          Length = 321

 Score = 85.8 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 94/258 (36%), Gaps = 43/258 (16%)

Query: 339 FYFIAKPMFMLMSYFYNLV-------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           + ++ +P+  +M    +++           I  ++  V +  L      K       M  
Sbjct: 43  YQWLGRPLQNIMIQTAHMIGGDNGAGWGIVIITVVVRVILMPLMLVQQNKSVRQQEKMAR 102

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-------LAGCWPILLQIPVFFAIY 444
           +QP++  ++   +       Q+  +  ++    +          GC P+++Q+P+ + IY
Sbjct: 103 LQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCLPLIIQLPIMWGIY 162

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           + +  S ++  + F+G    L++                        +  II ++   IQ
Sbjct: 163 QAVFYSPQLAQSKFFG--ISLSSK---------------------SVVLAIIATVFTVIQ 199

Query: 505 MKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
             +S     + Q   +  M    P++ +F   SF   L +YW+  N++ I+QQ ++    
Sbjct: 200 GYISLIGIPEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIIQQVIVT--F 257

Query: 561 GAEIGLIDRLRSTFSKNY 578
                +   +        
Sbjct: 258 VLTPSVKKHIADELKDKP 275


>gi|297601977|ref|NP_001051873.2| Os03g0844700 [Oryza sativa Japonica Group]
 gi|255675045|dbj|BAF13787.2| Os03g0844700 [Oryza sativa Japonica Group]
          Length = 173

 Score = 85.8 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 17/143 (11%)

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTN----- 472
           YK  +++PLAGC P L+ IPV+  +Y+ +S  + E      + WI  LA           
Sbjct: 1   YKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAARQSG 60

Query: 473 --IFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQA---MILN 521
             I  LF    G  P      +   + P+++ +S ++  ++  PP   D  Q     ++ 
Sbjct: 61  QGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQGAQAVVK 120

Query: 522 WMPVVFVFALSSFPAGLIIYWSW 544
           ++P++  +   S P+GL +YW  
Sbjct: 121 FLPLLIGYFALSVPSGLSLYWCV 143


>gi|312140437|ref|YP_004007773.1| integral membrane protein [Rhodococcus equi 103S]
 gi|325675949|ref|ZP_08155632.1| membrane protein OxaA [Rhodococcus equi ATCC 33707]
 gi|311889776|emb|CBH49093.1| putative integral membrane protein [Rhodococcus equi 103S]
 gi|325553187|gb|EGD22866.1| membrane protein OxaA [Rhodococcus equi ATCC 33707]
          Length = 293

 Score = 85.8 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 102/294 (34%), Gaps = 57/294 (19%)

Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              F+  P+  ++ +++              + +A+M     ++LL    A +Q  +   
Sbjct: 1   MLDFVYYPVSAILWFWHKAFGAALGPDNGFAWALAVMFLVFTLRLLLLGPAIRQIRTGLQ 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447
           M+ +QP+I  L++K+     Q +   M +L + H  NPL GC P+L+Q PVF  +Y V+ 
Sbjct: 61  MRELQPQIKALQKKYAG-DRQRMALEMQKLQQEHGFNPLMGCLPMLVQAPVFIGLYHVLR 119

Query: 448 ----------------------------------SISLEMRHAPFWGWIKDLAAADPTNI 473
                                              +S  +  AP    I   +       
Sbjct: 120 SFNRTGTGHGGLGMTAQDNANTANYIFSPADVQSFLSARLFGAPISTAIT--SPQSTLES 177

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK----------GQAMILNWM 523
           F   G +P             +I SL+     + S    +              ++L   
Sbjct: 178 FAAHGGVPTVATIAAVAIPLMVIASLATHFNARASVARQEPDASANPQTAIMNKLMLWVF 237

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           P+  +         +++YW  +N+ +  QQ ++      E  +  R  +   +N
Sbjct: 238 PLGVLVGGPFLMIAILLYWVSNNIWTYAQQHLVFARLDRETAVKQRALAQERQN 291


>gi|291561650|emb|CBL40449.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
           [butyrate-producing bacterium SS3/4]
          Length = 416

 Score = 85.8 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 14/120 (11%)

Query: 475 TLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSP-----------PPADKGQAMILN 521
           T  G+     PG++     I P++ ++S +   K+              P  +    +  
Sbjct: 221 TFLGLNMAEAPGWVPSFAWIIPVLAAVSQWFSTKLMSGNQPSTSADAENPMAQSMKTMTT 280

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            MP+   F   + PAGL IYW  ++V++I+QQ ++      ++ + D +     K    +
Sbjct: 281 TMPLFSAFICITMPAGLGIYWIATSVVTIIQQLIVNAYMD-KVNIDDMIAKNLEKVNKKR 339


>gi|291319996|ref|YP_003515254.1| hypothetical protein MAGa0630 [Mycoplasma agalactiae]
 gi|290752325|emb|CBH40296.1| Conserved hypothetical protein [Mycoplasma agalactiae]
          Length = 715

 Score = 85.8 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 71/495 (14%), Positives = 157/495 (31%), Gaps = 57/495 (11%)

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
                V  ++P N+K     +       NN            +S    +           
Sbjct: 222 DKEKNVFKINPENSKLINEGKFTSKLEVNNNRNSTPFLFDKELSYLTFSSKNDFT----- 276

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
                F R I              ++ S    +   +      +   + +  G  +  + 
Sbjct: 277 -GFAKFRRDIL----ETLATNTFYSDKSSYYRKALSQVESKLREANYSVDYNGFNKYLVD 331

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS-----FHSQFKY 277
            + +K   E +++     ++  ++++ +       + A   I   + S      +    Y
Sbjct: 332 KIKNKKASELEFAPNVFYALKYYNKALNKYASELNFSALNQISPVKNSVIEEINNLSNDY 391

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM----- 332
                   +             + +  T+ L + A            + IP         
Sbjct: 392 NKINDKNSKEAVELKRKITSLNEQLRNTSRLLSPAPYSTMTVKLTDAVNIPYSGDEPQRV 451

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT------------VFVKLLFFPLAK 380
           + +W   + +     +L+     L  +   ++                + ++     +  
Sbjct: 452 IHNWSDAWKLGPFYGLLVFPTAWLSAHLSTSLSHLGGWGTIIVILVLTIILRSAMLAVTF 511

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQ-----KAMIQLYKTHNINPLAGCWPILL 435
           KQ V+ +  + ++ K  ++  K+              + + +LYK H INPL     +++
Sbjct: 512 KQTVNQSKQEELKSKKAKIDAKYADFKNNKQMKARQQQEVAELYKKHGINPLDAFVTMII 571

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF-------GILPFYLPGFM 488
            +PVF  +++VI    E +   + G    L+ A+ +     F       G+L        
Sbjct: 572 SLPVFIMMWRVIQSLPEFKSTVWLG----LSFAETSWRRLFFSGEWQYLGLLVVVAAVQG 627

Query: 489 HVGIWPIIMSLSMF-----IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
                P I++   F     ++ + +   A++ Q      M +VF F    F AGL +YW 
Sbjct: 628 VAQFLPQILNRKKFKERTSLEEEKALKKANRTQR----IMTIVFFFITLIFSAGLQVYWI 683

Query: 544 WSNVISIVQQAVIMK 558
            S + +I+Q   I K
Sbjct: 684 ISGIWTIIQTLSIHK 698


>gi|116198719|ref|XP_001225171.1| hypothetical protein CHGG_07515 [Chaetomium globosum CBS 148.51]
 gi|88178794|gb|EAQ86262.1| hypothetical protein CHGG_07515 [Chaetomium globosum CBS 148.51]
          Length = 600

 Score = 85.8 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 83/258 (32%), Gaps = 41/258 (15%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTA 387
            F   +   + +     M  ++   Y   G    A I +  V +++           +T 
Sbjct: 265 GFLKTLGLEFGWGPTSLMQTVLESVYVYTGLPWWASIAMVAVGLRVALLKPTLDASENTV 324

Query: 388 NMK------NIQPKIDELREKFKQSPPQVLQKAMIQ--LYKTHNINPLAGCWPILLQIPV 439
             +           +++++            +A  +  L        L   +  +LQ+P+
Sbjct: 325 KYQKLLKNPEYAAAMEDMKSLMITGNHMAGAQARAKVSLMNKEAGYSLWKNFAPMLQLPL 384

Query: 440 FFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
            + ++++I     +           W  DL AADP                     I PI
Sbjct: 385 GYGMFRLIKGMSALPVPSFETGGILWFTDLTAADPLF-------------------IMPI 425

Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF----ALSSFPAGLIIYWSWSNVISIV 551
           +  L + + M++  P     Q   +  M +V +          P+GL +Y+  S+V+   
Sbjct: 426 VTGLVVMVGMRIPLPYMAPQQQQTMKTMALVIMPLSTAVGLFLPSGLTLYFLLSSVLHTF 485

Query: 552 Q-----QAVIMKMHGAEI 564
           Q     Q    +M G   
Sbjct: 486 QTYMMHQHWFRRMVGLRP 503


>gi|160941468|ref|ZP_02088803.1| hypothetical protein CLOBOL_06359 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435614|gb|EDP13381.1| hypothetical protein CLOBOL_06359 [Clostridium bolteae ATCC
           BAA-613]
          Length = 438

 Score = 85.8 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/345 (13%), Positives = 101/345 (29%), Gaps = 29/345 (8%)

Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL--PGKSITTTNFLFAGAKEFPT 317
              +I      F S F  L+ G            + I     +  ++        +    
Sbjct: 23  ILGWIMDLLFRFTSTFGILNIGLCIILFTLVTKVLMIPLTIKQQKSSKLMAVMQPEITAI 82

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
              Y+   +  ++ M++         K    +      L+    I   L  V   +  + 
Sbjct: 83  QKKYKGKESDQKYAMMMQTEIKAVYEKYGTSMTGGCLPLLIQMPIIFALYRVIYNIPAYV 142

Query: 378 LAKKQYVST---------ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK--THNINP 426
            + + Y               +         +   ++     +   +  LYK      + 
Sbjct: 143 QSVRVYYEAVVSKLPSGYEASQAFTDLAQAHKMVGERFDYTNVNTVIDLLYKLTGQQWDS 202

Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486
           L   +  + Q      +  V   ++E      +  +          +     +    L  
Sbjct: 203 LVNAFSSVGQAVTETGVRVV--DAIENMQ--NFFGLNIAYTPLQVIMNYFNKVDNTTLMT 258

Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQ------AMILN----WMPVVFVFALSSFPA 536
                  P++  LS +   K+        Q      A ++      MP++ VF   SF +
Sbjct: 259 AFAALCIPLLAGLSQWYSTKL-MTANQPQQSEDAPGANMMKSMNVTMPLMSVFFCFSFAS 317

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           G+ +YW   +V +I+QQ  I   +  ++ + D ++    K    +
Sbjct: 318 GIGLYWVAQSVFTIIQQVGIN-SYLNKVDIDDLVQKNIEKTNKKR 361


>gi|39938735|ref|NP_950501.1| preprotein translocase subunit YidC [Onion yellows phytoplasma
           OY-M]
 gi|39721844|dbj|BAD04334.1| preprotein translocase subunit YidC [Onion yellows phytoplasma
           OY-M]
          Length = 525

 Score = 85.8 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/405 (15%), Positives = 129/405 (31%), Gaps = 53/405 (13%)

Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243
               N+       +   +          + +     +       +L  + Y D    S+ 
Sbjct: 140 FKNKNDKEKTEFKNKLMKDFLTVSAGTNDDYIQNNKYQKKELKDALEFRTYEDKTPLSLE 199

Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303
           N           D Y  ++   S   S +   K+ ++ +                     
Sbjct: 200 NIKLDFD----KDHYAENIKNTSNNDSSNIDIKFTNNNNDHLI-------------SRKL 242

Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363
                    +    +             + I    ++F    +           GN G+ 
Sbjct: 243 FITNSSVPIQFPSRLEWSLFGYFWNVLIISIGSFLYFFSTFLVSGA---SGMFFGNLGLG 299

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLY 419
           I+L T+F++ L +P+  K    + NM  IQP+I+++++K+         Q +Q  ++++Y
Sbjct: 300 IVLATIFIRTLTWPIYTKTSTLSMNMSLIQPEIEKVKQKYALKKDPASAQKMQLEILKVY 359

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           + +N +   G     LQ+P+F AI + +S  +     P   +  D     P        +
Sbjct: 360 RKNNFS-FWGFLLSFLQLPLFIAINQTLSRFI----IPGGIFATDKLIEKP--FLGFINL 412

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-----------------KGQAMILNW 522
            P        + +   ++  +MFI  K+S    D                 K     +  
Sbjct: 413 NPSNPNNAFVIFLLSFLVGATMFILNKISFKKPDYLKTPSYYLTSEQKQKAKQSEKSMKI 472

Query: 523 MPVVFVFALSSF----PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           M V  +  +  F    P  L +YW   N  +I Q  +  K    +
Sbjct: 473 MSVFMILMMVFFSRSNPI-LSLYWIVGNTYTIFQTLLTRKKMQQK 516


>gi|325846396|ref|ZP_08169365.1| membrane protein insertase, YidC/Oxa1 family [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325481580|gb|EGC84620.1| membrane protein insertase, YidC/Oxa1 family [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 252

 Score = 85.8 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 40/239 (16%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           + I+I+L TV V L+  P+   Q    A    IQPKI+E+++K+    PQ++Q+ M QLY
Sbjct: 33  YAISIILMTVLVSLITIPMTMNQQKQAAKSGEIQPKIEEIKKKYA-YDPQIMQQKMQQLY 91

Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISISL-------EMRHAPFWGWIKDLAAADPT 471
           K   + P L+ C  ++ Q+ +  ++Y+VI             +    + W+  L+ ADP 
Sbjct: 92  KEEGVGPGLSSCLVMIFQLLILLSLYRVIQSPDKYIFQGSMHQVKDNFLWVPTLSKADPL 151

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM----------ILN 521
                                 P++ S+S       +   + + QA           +L 
Sbjct: 152 FYG------------------LPLLTSISQLAVQVFTMKTSPQSQAQNTPGMGSMNNMLM 193

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ---QAVIMKMHGAEIGLIDRLRSTFSKN 577
            MP+++ F   + PAGL +YW+ S++  ++    Q +I      +    +++ S  SKN
Sbjct: 194 IMPIIYYFVFRNLPAGLPLYWTTSSLARLIILGGQYLIGLNKRDKEEENEKINSKNSKN 252


>gi|73748802|ref|YP_308041.1| putative inner membrane protein, 60 kDa [Dehalococcoides sp. CBDB1]
 gi|289432822|ref|YP_003462695.1| membrane protein insertase, YidC/Oxa1 family [Dehalococcoides sp.
           GT]
 gi|73660518|emb|CAI83125.1| putative inner membrane protein, 60 kDa [Dehalococcoides sp. CBDB1]
 gi|288946542|gb|ADC74239.1| membrane protein insertase, YidC/Oxa1 family [Dehalococcoides sp.
           GT]
          Length = 315

 Score = 85.4 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 8/223 (3%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
            ++  +  ++   +NL G+FG+ +++ TV ++L  +PL +KQ  +T  M+ I   +D L+
Sbjct: 11  ILSPMINGMVWLSHNLWGSFGLTVIVLTVVIRLALWPLNRKQLTATKKMQEITVHMDALK 70

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           +K      Q L +  ++LYK   ++      P+L+Q P++ A+Y+ I   L +    F  
Sbjct: 71  KKHGN-DRQKLAEEQMKLYKESGVSTTGCLVPMLIQFPIWIALYQAIVRVLAVTPEDFMN 129

Query: 461 WIKDL-AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
               L +         L     +         +  +++ L MF+Q KMS P A   Q   
Sbjct: 130 LSNHLYSWPVVYETLPLSNNFLWMDLSRSDF-VLALLVGLGMFVQQKMSTPKAINQQQAA 188

Query: 520 L-----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
                   MP +F F   SFP+GL  YW  S V+ I+ Q  I 
Sbjct: 189 QSQMLSFMMPFMFFFFSLSFPSGLAFYWFVSAVVGIIMQYFIT 231


>gi|229826869|ref|ZP_04452938.1| hypothetical protein GCWU000182_02253 [Abiotrophia defectiva ATCC
           49176]
 gi|229788487|gb|EEP24601.1| hypothetical protein GCWU000182_02253 [Abiotrophia defectiva ATCC
           49176]
          Length = 424

 Score = 85.4 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 10/117 (8%)

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI---QMKMSPPPAD------KGQAMILNW 522
           ++F LF I            I P++  +  FI   QM  + P  +           ++N+
Sbjct: 226 SVFGLFSISDVPGFAKPLTFIVPVLAGVLQFINGKQMMKNQPQTNTNDQASAINKNMMNF 285

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           MP +  F   +FP G+ +YW   ++  I+QQ    K+    + + + +R    K   
Sbjct: 286 MPFMQAFFCITFPIGIGVYWIAGSIFMIIQQYFFNKLLKN-VDVDEMIRKNQEKAAK 341



 Score = 49.6 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412
           + N  I I+L T  ++ L  P+  KQ         + P++ E+ +K+K          +Q
Sbjct: 39  IENAAICILLFTFIMRALMMPMYYKQQKVGKLTSRMTPELQEISKKYKGKRDMESQRKMQ 98

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           +    +Y+ +  NPL+GC P+L+ +P+ F +Y+++     
Sbjct: 99  QETQAVYEKYGSNPLSGCLPVLITLPIMFGLYRIVQSMPA 138


>gi|256843612|ref|ZP_05549100.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|312984343|ref|ZP_07791685.1| hypothetical protein LBKG_02299 [Lactobacillus crispatus CTV-05]
 gi|256615032|gb|EEU20233.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|310894268|gb|EFQ43348.1| hypothetical protein LBKG_02299 [Lactobacillus crispatus CTV-05]
          Length = 321

 Score = 85.4 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 78/211 (36%), Gaps = 32/211 (15%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCW 431
                ++Q         ++   + +R K      Q+       +LY  + ++     GC 
Sbjct: 90  QNKSVRQQEKMARLQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCL 149

Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491
           P+++Q+P+ + IY+ +  S ++  + F+G    L++                        
Sbjct: 150 PLIIQLPIMWGIYQAVFYSPQLAQSKFFG--ISLSSK---------------------SV 186

Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNV 547
           +  II ++   IQ  +S     + Q   +  M    P++ +F   SF   L +YW+  N+
Sbjct: 187 VLAIIATVFTVIQGYISLIGIPEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNL 246

Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           + IVQQ ++         +   +        
Sbjct: 247 VMIVQQVIVT--FVLTPSVKKHIADELKDKP 275


>gi|115450311|ref|NP_001048756.1| Os03g0116000 [Oryza sativa Japonica Group]
 gi|113547227|dbj|BAF10670.1| Os03g0116000 [Oryza sativa Japonica Group]
          Length = 440

 Score = 85.4 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 89/267 (33%), Gaps = 54/267 (20%)

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            P          F  +A    ++         N+   I LT++ ++ L  PL   Q  +T
Sbjct: 124 FPGEVAAAAADSFAPVAALQHLIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQMKAT 183

Query: 387 ANMKNIQPKIDELR------------------EKFKQSPPQVLQKAMI--------QLYK 420
             +  ++P+I+ +                    +             +        +L+ 
Sbjct: 184 VKLNAMRPEIEAINLEMRTISSTRIAGNEKSSTRVTDEGSMSTDPQSMLEGKRKLGELFL 243

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLE---MRHAPFWGWIKDLAAADPTNIFTLF 477
            H + PL     + +Q P+F + +  IS  +E           W  DL   D        
Sbjct: 244 RHGVTPLTPLKGLFIQAPIFMSFFFAISNMVEKVPSFKGGGIYWFTDLTTPD-------- 295

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNW---MPVVFVFAL 531
                       + I P++ SL+  + ++++       +     + N+   M V+ +   
Sbjct: 296 -----------ELLILPMLTSLTFLVTVELNMQDGMEGNPMLKTMKNFSRVMAVLTIPFT 344

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558
            SFP  +  YW  SN+ S+    V+ K
Sbjct: 345 MSFPKAIFFYWVTSNLFSLGYGFVLRK 371


>gi|197294709|ref|YP_001799250.1| Preprotein translocase subunit YidC [Candidatus Phytoplasma
           australiense]
 gi|171854036|emb|CAM12009.1| Preprotein translocase subunit YidC [Candidatus Phytoplasma
           australiense]
          Length = 471

 Score = 85.4 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 76/480 (15%), Positives = 161/480 (33%), Gaps = 46/480 (9%)

Query: 124 LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIV 183
           +  +S   N+  P   ++   +     +    I ++ K           +L++ +    +
Sbjct: 1   MKNISFKKNLFFPLFLSLTLFLLFFWPSVKMKINILQKVKIENDEFFVYTLNDKHQDIKI 60

Query: 184 DTVTN-----NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
           DT TN     +S ++ +    GR   +   +       ++   A  G+    E K     
Sbjct: 61  DTKTNYDKWKDSQEKEKRFFIGRKKFNINVSEPENKDPKQLPFAFKGNP---ESKDKVEI 117

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
              +       +   I DK +  +          +        +        A    I  
Sbjct: 118 IKKLLTVPAGTNIRYIKDKKFEKLRDLLDFKEGTNHTLTNIFHNLEDTKGSEAKLKQISS 177

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIP-----RFEMLIDWGWFYFIAKPMFMLMSYF 353
            K +   +       +   I  +  ++ +P       E       +  +   +   + +F
Sbjct: 178 DKPLELKSKFTLQEGKNEEIIFFVTNVFLPIQFPQYLEWSAFGYLWNVLIVSVGSFLYFF 237

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF----KQSPPQ 409
                + G+ I+LTT+  + L +P+  K    T NM  IQP+I+++++K+      +  Q
Sbjct: 238 SYPFASLGLGIILTTILFRTLTWPIYTKTTTFTMNMNLIQPEIEKVKQKYALQSDPASAQ 297

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            +Q  ++++Y+ +N +   G     LQ+P+F +I + +   +     P   +  D     
Sbjct: 298 KMQLEILKVYRKNNFS-FWGFLVSFLQLPLFISINQTLGRFI----VPGGIFETDKLIEK 352

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---------------- 513
           P   F  F         +  V +   ++ L+MF   K+S    D                
Sbjct: 353 PFLGFIKFNQ----PNHWFVVSLLSFLVGLTMFFLNKVSFKKPDYLKKPTHHLTLEQKEK 408

Query: 514 -KGQAMILNWMPVVFVFALSSFPAG---LIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            K     +  M    +  +  F      L +YW   N  +I Q  +  K    +  L+  
Sbjct: 409 AKQSEKTMKIMSWFMILMMVLFSCSNPILSLYWIVGNTYTIFQTLITRKNMEKKYFLLKN 468


>gi|332296958|ref|YP_004438880.1| 60 kDa inner membrane insertion protein [Treponema brennaborense
           DSM 12168]
 gi|332180061|gb|AEE15749.1| 60 kDa inner membrane insertion protein [Treponema brennaborense
           DSM 12168]
          Length = 901

 Score = 85.4 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 90/222 (40%), Gaps = 16/222 (7%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389
           +     Y + + +      F  +  N GI+++  +  V +L  PL       Q V     
Sbjct: 5   LYTVIIYPLIQIIEFAFMLFNGVFKNAGISVIGVSFAVSILCLPLYIVAEHWQQVQRDIE 64

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           K + P I  ++  FK     ++     +    H I  L   + +L+QIP F A Y  +S 
Sbjct: 65  KRLDPGISRIKAVFKGDEQYMILSTFYKQNHYHPIMALRSSFGLLIQIPFFIAAYSFLSK 124

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
              +     + +IKD+ A D       F            + + PI M++   +   +  
Sbjct: 125 LPVLAGK-NFLFIKDMGAPDALFSIGTF-----------PINVLPIAMTVINIVAGAIYT 172

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
                   + +  M +VF+  L + P+GL++YW+ +N+ S+V
Sbjct: 173 KGFKAKDKIQIYGMALVFLVILYNSPSGLVLYWTMNNIFSLV 214


>gi|148377328|ref|YP_001256204.1| putative inner membrane protein translocase component YidC
           [Mycoplasma agalactiae PG2]
 gi|148291374|emb|CAL58757.1| Conserved hypothetical protein [Mycoplasma agalactiae PG2]
          Length = 715

 Score = 85.4 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 71/495 (14%), Positives = 159/495 (32%), Gaps = 57/495 (11%)

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
                V  ++P N+K     +       NN            +S    +           
Sbjct: 222 DKEKNVFKINPENSKLINEGKFTSKLEVNNNRNSTPFLFDKELSYLSFSSKNDFT----- 276

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
                F R I              ++ S   ++   +      +   + +  G  +  + 
Sbjct: 277 -GFAKFRRDIL----ETLATNTFYSDKSSYYLKALSQVESKLKEANYSVDYNGFNKYLVD 331

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS-----FHSQFKY 277
            + +K   E +++     ++  ++++ +       + A   I   + S      +    Y
Sbjct: 332 KIKNKKANELEFAPNVFYALKYYNKALNKYASELNFSALNQISPVKNSVIEEINNLSNDY 391

Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM----- 332
                   +      +      + +  T+ L + A            + IP         
Sbjct: 392 NKINDKNSKEAVELKKKITSLNEQLRNTSRLLSPAPYSTMTVKLTDAVNIPYSGDEPQRV 451

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT------------VFVKLLFFPLAK 380
           + +W   + +     +L+     L  +   ++                + ++     +  
Sbjct: 452 IHNWSDAWKLGPFYGLLVFPTAWLSAHLSTSLSHLGGWGTIIVILVLTIILRSAMLAVTF 511

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQ-----KAMIQLYKTHNINPLAGCWPILL 435
           KQ V+ +  + ++ K  ++  K+              + + +LYK H INPL     +++
Sbjct: 512 KQTVNQSKQEELKSKKAKIDAKYADFKNNKQMKARQQQEVAELYKKHGINPLDAFVTMII 571

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF-------GILPFYLPGFM 488
            +PVF  +++VI    E +   + G    L+ A+ +     F       G+L        
Sbjct: 572 SLPVFIMMWRVIQSLPEFKSTVWLG----LSFAETSWRRLFFSGEWQYLGLLVVVAAVQG 627

Query: 489 HVGIWPIIMSLSMF-----IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
                P I++   F     ++ + +   A++ Q      M +VF F    F AGL +YW 
Sbjct: 628 VAQFLPQILNRKKFKERTSLEEEKALKKANRTQR----IMTIVFFFITLIFSAGLQVYWI 683

Query: 544 WSNVISIVQQAVIMK 558
            S + +I+Q   I K
Sbjct: 684 ISGIWTIIQTLSIHK 698


>gi|297824719|ref|XP_002880242.1| hypothetical protein ARALYDRAFT_483801 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326081|gb|EFH56501.1| hypothetical protein ARALYDRAFT_483801 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 434

 Score = 85.0 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 93/239 (38%), Gaps = 40/239 (16%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           E+ I      F    +  L+   ++  G N+  +I LTTV ++ +  P+   Q  +T  +
Sbjct: 127 EVAIAAADSAFPVAALQHLIDGVHSFTGLNWWASIALTTVLIRGVTIPILLNQLKATYKL 186

Query: 390 KNIQPKIDELRE----KFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIY 444
             ++P+++ELR+    K +        +  +QL +K H + P      +++Q P+F + +
Sbjct: 187 NVLRPQLEELRQEMSTKAQDPEAMAEGQRRMQLLFKEHGVTPFTPLKGLIIQGPIFISFF 246

Query: 445 KVISISLEMRHAPFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
             I    E    P +      W  DL  AD T                    I P++ ++
Sbjct: 247 FAIRNMAE--KVPSFKTGGTLWFTDLTTADTTY-------------------ILPLLTAV 285

Query: 500 SMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAG----LIIYWSWSNVISIV 551
           +  I ++ +       +   A  +     +  F       G    L  YW  SN+ ++V
Sbjct: 286 TFLIMVESNMQEGLEGNPV-AGTMKKFSRIIAFLSIPVLIGIEKALFCYWLTSNLFTLV 343


>gi|126652600|ref|ZP_01724764.1| OxaA-like protein precursor [Bacillus sp. B14905]
 gi|126590591|gb|EAZ84708.1| OxaA-like protein precursor [Bacillus sp. B14905]
          Length = 210

 Score = 85.0 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 99/230 (43%), Gaps = 32/230 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ---- 393
            F F+ +P+   + + ++  G++ I ++  T+ V+ +  PL  K      + K++     
Sbjct: 1   MFTFLTQPIIYFIHFIHSFTGSYAIGVISITIAVRAILMPLFIKSAKHQKHSKDLMTSIK 60

Query: 394 ----PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
                   +L+    +S   ++Q+ + +L      + L GC PI++Q+PV F++Y  I I
Sbjct: 61  PELDVLTAKLKNSHDESEKIMVQQKIQELTSDSLKSSLLGCLPIIIQLPVLFSLYYAIKI 120

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
              +     + W+                       G + +GI  II  +  F+Q  +S 
Sbjct: 121 DTVIASE-NFLWMN---------------------LGTVDIGI-SIIACVIYFMQSWLSL 157

Query: 510 PPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                    I+ ++ P++ +      PA + IYW+ S ++  VQQ +I K
Sbjct: 158 DKNQPINMKIMMFINPIMILIFSLFNPAIIPIYWTVSALLLTVQQLIIKK 207


>gi|29831751|ref|NP_826385.1| hypothetical protein SAV_5208 [Streptomyces avermitilis MA-4680]
 gi|29608868|dbj|BAC72920.1| putative membrane protein [Streptomyces avermitilis MA-4680]
          Length = 243

 Score = 85.0 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 17/202 (8%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L T  V+LL  PL++           +QP++ ELR+K  ++P + LQKA+++L+    
Sbjct: 28  IVLFTALVRLLVHPLSRASARGQRARARLQPQVAELRKKHGKNPEK-LQKALLELHAEEK 86

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG-ILPF 482
           ++PL+GC P L Q+P FF +Y + S +                A          G   PF
Sbjct: 87  VSPLSGCLPGLFQLPAFFLLYHLFSNTTIGGEGNELLTHTLFTAPLGDRWADALGDGGPF 146

Query: 483 YLPGFMHVGIWPIIMSLSMF------IQMKMSPPP-ADKGQA-----MILNWMPVVFVFA 530
              G +++G++ I+ +++ F        M  +P P  D  Q       I  +MP++  F 
Sbjct: 147 GTQGLVYLGLFAIVAAVATFNYRRTKRTMAANPLPVGDGEQQVPGLGAINRFMPLMSFFT 206

Query: 531 LSS---FPAGLIIYWSWSNVIS 549
           L +    P    +Y   S   S
Sbjct: 207 LFTVAFVPLAAALYVVTSTTWS 228


>gi|270308300|ref|YP_003330358.1| preprotein translocase YidC subunit [Dehalococcoides sp. VS]
 gi|270154192|gb|ACZ62030.1| preprotein translocase YidC subunit [Dehalococcoides sp. VS]
          Length = 315

 Score = 85.0 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 8/223 (3%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
            ++  +  ++   +NL G+FG+ +++ TV ++L  +PL +KQ  +T  M+ I   ++ L+
Sbjct: 11  ILSPMINGMVWLSHNLWGSFGLTVIVLTVVIRLALWPLNRKQLTATKKMQEITVHMEALK 70

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           +K      Q L +  ++LYK   ++P     P+L+Q P++ A+Y+ I   L +    F  
Sbjct: 71  KKHGN-DRQKLAEEQMKLYKESGVSPTGCLVPMLIQFPIWIALYQAIVRVLAVTPEDFMN 129

Query: 461 WIKDL-AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-----DK 514
               L +         L     +            +++ +SM++Q KMS P A       
Sbjct: 130 LADHLYSWPVVYQTLPLSNHFLWMDLSLPDF-ALALLVGVSMYVQQKMSTPKAINQQQAA 188

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
              M+   MP +F F   SFP+GL  YW  S ++ I+ Q  I 
Sbjct: 189 QGQMMSFMMPFMFFFFSLSFPSGLAFYWFVSAIVGIIMQYFIT 231


>gi|326793318|ref|YP_004311139.1| membrane protein insertase, YidC/Oxa1 family [Clostridium
           lentocellum DSM 5427]
 gi|326544082|gb|ADZ85941.1| membrane protein insertase, YidC/Oxa1 family [Clostridium
           lentocellum DSM 5427]
          Length = 394

 Score = 84.7 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 27/138 (19%)

Query: 471 TNIFTLFGILPFYLPGFMH-----VGIWPIIMSLSMFIQMKMSPP--------------- 510
            +I    G      P  +      V + PII   S +I  K++                 
Sbjct: 208 YSIENFLGFNVVDTPSVLMSTQWWVILIPIIAGASTYIFTKLTMAANGQVQSAAATSNNG 267

Query: 511 ---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK---MHGAEI 564
              P +     +   MP++      + P GL +YW   NVI + QQ ++ K      A++
Sbjct: 268 AANPGESMMKTMNIVMPIMTGVFAYTMPIGLALYWIAGNVIMMGQQWIVNKILEKQDAKL 327

Query: 565 GL-IDRLRSTFSKNYNSQ 581
              +++ R    KN   Q
Sbjct: 328 DAQLEKEREEARKNNKIQ 345



 Score = 43.8 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 4/94 (4%)

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMI 416
           GI+I+L T+  ++L  PL      ++  M  IQP++ +++ K+K    Q       + M 
Sbjct: 29  GISIILFTLVARILLTPLQLSSQRTSRGMSKIQPEMQKIQNKYKGKKDQESQLKQSQEMQ 88

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            LYK + INP AGC P+L+Q+P+  A++ V+   
Sbjct: 89  ALYKKYKINPFAGCLPLLIQLPLIMALFNVLREP 122


>gi|197302264|ref|ZP_03167323.1| hypothetical protein RUMLAC_00991 [Ruminococcus lactaris ATCC
           29176]
 gi|197298695|gb|EDY33236.1| hypothetical protein RUMLAC_00991 [Ruminococcus lactaris ATCC
           29176]
          Length = 443

 Score = 84.7 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 9/111 (8%)

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-----DKG---QAMILNWMPVVFVFA 530
           +    + G +   + P++  L+ FI +K+ P  A     +        +   MP++ V  
Sbjct: 245 LHNGSIVGVILAVLIPVLAGLTQFISVKLQPNAASADKDNPMAGSMNAMTYTMPLISVVM 304

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             + PAGL +YW+ S ++  +QQ  I K    +  L + +     K    +
Sbjct: 305 GFTLPAGLGLYWAASAIVRCIQQLAINKYLSTK-SLDEMIAENQKKAQKKR 354



 Score = 54.2 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 62/123 (50%), Gaps = 5/123 (4%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           +  I     + + + M  + +    + + N G+ I++ T+ V  L  PL  KQ   +   
Sbjct: 13  DWPIIKQIAWLLGQVMNGIFNVLSAIGIENIGVCIIIFTIIVYTLMIPLTIKQQKFSKMS 72

Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
             +QP+I ++++K++    Q      Q+ +  +Y+ +  +   GC P+L+Q+P+ FA+Y 
Sbjct: 73  AVMQPEIKKIQKKYEGKKDQASMMKQQEEINMVYEKYGTSMSGGCLPMLIQMPILFALYP 132

Query: 446 VIS 448
           VI 
Sbjct: 133 VIR 135


>gi|227506191|ref|ZP_03936240.1| inner membrane protein translocase component YidC [Corynebacterium
           striatum ATCC 6940]
 gi|227197215|gb|EEI77263.1| inner membrane protein translocase component YidC [Corynebacterium
           striatum ATCC 6940]
          Length = 330

 Score = 84.7 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 60/311 (19%), Positives = 113/311 (36%), Gaps = 68/311 (21%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++ +++ L+           + ++I+L T  +K +       Q  S+  
Sbjct: 1   MLNFIYWPISAVLWFWHWLLSFVMDPAQGITWILSIVLLTWTLKAVMVKPTITQLRSSRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ IQP+I ELR K+     +   + M ++YK   + P+AGC P+L QIP+F  ++ V+ 
Sbjct: 61  MQEIQPQIQELRTKYANDQTKA-AQEMQRIYKESGVRPMAGCLPVLAQIPMFIGLFHVLR 119

Query: 449 -------ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-------P 494
                  ++  + H        D  A     IF    +  F       V +        P
Sbjct: 120 SFDRTVQVAGGIGHPAGEPMSVDANANTANYIFKPELVQQFLDAKIFGVPLIANLRVNSP 179

Query: 495 II--MSLSM------------------FIQMKMS-----------------PPPADKGQA 517
           I+    ++M                      +MS                    A+  Q 
Sbjct: 180 ILDQQGITMSQAAVIIVPLIVIIAVLTHFNARMSLNRQEARRASGKTAAPQGQNAEMMQQ 239

Query: 518 ------MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
                  ++ W MP + VF+ + +P GL+ Y   + V +  Q  ++ K    E       
Sbjct: 240 QMAIMNKMMLWVMPGMLVFSGAIWPIGLLFYMLANTVWTFFQTRIVYKKMDEEEERELAA 299

Query: 571 RSTFSKNYNSQ 581
           ++   +    +
Sbjct: 300 KAELKRTSAPK 310


>gi|218134370|ref|ZP_03463174.1| hypothetical protein BACPEC_02264 [Bacteroides pectinophilus ATCC
           43243]
 gi|217989755|gb|EEC55766.1| hypothetical protein BACPEC_02264 [Bacteroides pectinophilus ATCC
           43243]
          Length = 265

 Score = 84.7 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 15/125 (12%)

Query: 471 TNIFTLFGILPFYLPGFMHVGI---WPIIMSLSMFIQMKMSPP-----------PADKGQ 516
            N    F  +       + +G+    PI+  ++ ++ ++M              PA    
Sbjct: 61  FNHMNSFLTINMSQNPGLTLGLPILIPILAGVTQYLSVRMMQTQNPATGNNEDNPAAASM 120

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
            M+   MP++      S PAGL +YWS + V  I+QQ +I K    + G+ + ++    K
Sbjct: 121 KMMNTVMPIMSAVMAISLPAGLGLYWSATAVFQILQQFIINKYFDKK-GVDEIVKENVDK 179

Query: 577 NYNSQ 581
               +
Sbjct: 180 INKKR 184


>gi|326803748|ref|YP_004321566.1| membrane protein insertase, YidC/Oxa1 family [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651023|gb|AEA01206.1| membrane protein insertase, YidC/Oxa1 family [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 308

 Score = 84.3 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 35/214 (16%)

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPL--A 428
            +       + T   +  QP + + +E  + +     Q           K +NI+     
Sbjct: 77  TYKQQTSSILGTEKRRYYQPYLMKFQELIQGAETPEEQMEYTRQQQAFMKDNNISLFGNM 136

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           GC+P+L+Q+P+   +Y  I                        N   +     F      
Sbjct: 137 GCFPLLIQLPILSGMYVAI-----------------------YNNQNIANYNFFGFSLGE 173

Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADK----GQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
              +  II  L  F+Q ++S     +     Q   + +MP++  F + + PA + +Y   
Sbjct: 174 PNLVLTIIFILLSFLQTRISMQTMPEEVREQQGKSMLFMPLMLGFVVFNVPAAIGLYLVT 233

Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           + +  ++QQ  I         +  ++ +    N 
Sbjct: 234 TTIWGMLQQLAIN--TFVHPRIKAKVENEMKDNP 265


>gi|227534826|ref|ZP_03964875.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|301066722|ref|YP_003788745.1| preprotein translocase subunit YidC [Lactobacillus casei str.
           Zhang]
 gi|227187582|gb|EEI67649.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|300439129|gb|ADK18895.1| Preprotein translocase subunit YidC [Lactobacillus casei str.
           Zhang]
          Length = 332

 Score = 84.3 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 42/260 (16%)

Query: 337 GWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389
            ++  I  P+  LM +  +LV    ++GIAI++ T+ V+L+  PL  +Q           
Sbjct: 43  TFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQEKQ 102

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKT------HNINPLAGCWPILLQIPVFFAI 443
           K IQP++  ++E  K++     Q AM    +        ++ P  GC P+L+Q+P+F  +
Sbjct: 103 KIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFSGL 162

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           Y+ I+ S E+  A F+G    +       I T+   LP+ +   + +   P         
Sbjct: 163 YQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPYIVVSLIMLQGVP--------- 209

Query: 504 QMKMSPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
                       Q   +    ++ P++       + AGL +Y+    +I I+QQA++   
Sbjct: 210 ----------PEQRKAMQTTAFLNPIMTFVFCMMYNAGLGLYFGAGGIILIIQQAIVT-- 257

Query: 560 HGAEIGLIDRLRSTFSKNYN 579
           +     +  R+ +   +N  
Sbjct: 258 YVVTPNIRKRMDAEMEENPP 277


>gi|73662102|ref|YP_300883.1| preprotein translocase subunit [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82593014|sp|Q49Z38|OXAA_STAS1 RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|72494617|dbj|BAE17938.1| putative preprotein translocase subunit [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
          Length = 289

 Score = 83.9 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 54/270 (20%), Positives = 105/270 (38%), Gaps = 31/270 (11%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKK 381
           D + P       +  FY     +   +   +N        + +++  + +        K 
Sbjct: 21  DYSKPENRDGFFYNTFYVPMDNVIHWLGTSFNNDYGLAIVVLVLVIRIVLLPFMLSNYKN 80

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLA---GCWPIL 434
            ++    MK  +P ID ++EK K+S  Q  +      M+++YK +++NP+    GC PIL
Sbjct: 81  SHMMREKMKVAKPDIDAIQEKVKRSRTQEEKMAANSEMMEVYKKYDMNPMKSMLGCLPIL 140

Query: 435 LQIPVFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +Q+P+   ++ V+    S      P++ W  +LA  D                      I
Sbjct: 141 IQMPIIMGLFFVLKYPSSGGFTEHPYFLWF-NLAKPD-----------------IWITII 182

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
             I+  L  ++  K  P    +   M++   P++ V+   S  + L +YWS S    IVQ
Sbjct: 183 AGILYFLQAYVSSKSMPAEQRQMGYMMMVISPIMIVWISFSSVSALGLYWSVSAAFLIVQ 242

Query: 553 QAVIMKMHG--AEIGLIDRLRSTFSKNYNS 580
             V    +   A+  +   + +       +
Sbjct: 243 TQVANMYYSKLAQREVAPMIEAMEKNKAEA 272


>gi|191638667|ref|YP_001987833.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23]
 gi|190712969|emb|CAQ66975.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23]
 gi|327382708|gb|AEA54184.1| Membrane protein oxaA 2 [Lactobacillus casei LC2W]
 gi|327385895|gb|AEA57369.1| Membrane protein oxaA 2 [Lactobacillus casei BD-II]
          Length = 332

 Score = 83.9 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 42/260 (16%)

Query: 337 GWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389
            ++  I  P+  LM +  +LV    ++GIAI++ T+ V+L+  PL  +Q           
Sbjct: 43  TFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQEKQ 102

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKT------HNINPLAGCWPILLQIPVFFAI 443
           K IQP++  ++E  K++     Q AM    +        ++ P  GC P+L+Q+P+F  +
Sbjct: 103 KIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFSGL 162

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           Y+ I+ S E+  A F+G    +       I T+   LP+ +   + +   P         
Sbjct: 163 YQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPYIVVSLIMLQGVP--------- 209

Query: 504 QMKMSPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
                       Q   +    ++ P++       + AGL +Y+    +I I+QQA++   
Sbjct: 210 ----------PEQRKAMQTTAFLNPIMTFVFCMMYNAGLGLYFGAGGIILIIQQAIVT-- 257

Query: 560 HGAEIGLIDRLRSTFSKNYN 579
           +     +  R+ +   +N  
Sbjct: 258 YVVTPNIRKRMDAEMEENPP 277


>gi|320581780|gb|EFW95999.1| Mitochondrial inner membrane insertase [Pichia angusta DL-1]
          Length = 364

 Score = 83.9 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 74/233 (31%), Gaps = 27/233 (11%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF--------VKLLFFPLAKKQY 383
             +     ++ +  +   +   +   G    A +  T          + +       +  
Sbjct: 71  KSVGLSDGWWPSDLIQTTLEAVHVTTGLPWWATIAATTLGIRFALLPLFMASSDAMARSQ 130

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ----IPV 439
            +    K ++ +++    +  +   Q+  + + +L K + +          +Q    I  
Sbjct: 131 AAAPETKVLRKELNSAMARGDRMTQQLKMQEIKKLNKKYGVKYSRMFLSPGIQLTYGIGS 190

Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           FF I ++ ++ ++        W  DL A DP     L     +               ++
Sbjct: 191 FFGIREMANLPVQGFENQGLYWFNDLTAPDPYIGLQLISACLYAASFRFGGE-----TAV 245

Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           S F                    +P + +    +  A +++Y++ + + SI+Q
Sbjct: 246 SQF----------GPKTQKAFMALPFLSIVFTWNMSAAVLVYFTANGLFSIIQ 288


>gi|325478864|gb|EGC81974.1| membrane protein insertase, YidC/Oxa1 family [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 232

 Score = 83.9 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 35/222 (15%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           + IAI+L T+ V L+  P+   Q       K  +PK++E+++K+     Q++Q+ M QLY
Sbjct: 21  YAIAIILMTLLVSLMIIPMTISQQKQAERTKVFKPKMEEIQKKY-GYDQQIMQQKMQQLY 79

Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISISLEM-------RHAPFWGWIKDLAAADPT 471
           K   + P ++GC  +++QI V F +++++S + +             + WI  L   DP 
Sbjct: 80  KEEGVTPGISGCLVMIIQILVLFGLFRMMSDTTKYVFPEGLDNVKTNFYWIPTLLDKDPY 139

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--------MILNWM 523
                                 P++ SLS F     S     + Q          +   M
Sbjct: 140 WFG------------------LPLLTSLSQFAVQLFSMKTNPQMQQGGAMGGMNNMFLLM 181

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           P+++ F     PAGL +Y++ S++  +V   ++      +  
Sbjct: 182 PLMYFFVFRGLPAGLPLYYTLSSLFRLVIMVIMHFAMRNKKE 223


>gi|289826409|ref|ZP_06545521.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-3139]
          Length = 63

 Score = 83.9 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 31/48 (64%)

Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
             D  Q  I+ +MPV+F      FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 1   MTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 48


>gi|25029343|ref|NP_739397.1| putative inner membrane protein translocase component YidC
           [Corynebacterium efficiens YS-314]
 gi|259505655|ref|ZP_05748557.1| membrane protein OxaA [Corynebacterium efficiens YS-314]
 gi|38503027|sp|Q8FLS3|OXAA_COREF RecName: Full=Membrane protein oxaA
 gi|23494631|dbj|BAC19597.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259166737|gb|EEW51291.1| membrane protein OxaA [Corynebacterium efficiens YS-314]
          Length = 397

 Score = 83.5 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 95/254 (37%), Gaps = 45/254 (17%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK----IDELREKFKQSPPQVLQKAM 415
           + I++    + V+ +  P   K Y S      I+PK     +E + +  +   + +Q+  
Sbjct: 32  WFISLFGLVITVRAIIAPFTWKMYKSGRLTAQIRPKRVAIAEEFKGRHDEDSIREMQQKY 91

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA---PFWGWIKDLAAAD--- 469
             L K + INP AGC P L+QIPV   +Y+V+ +          P    I  L+A +   
Sbjct: 92  KDLNKEYGINPFAGCVPTLIQIPVILGLYQVLLLMARPEGGLENPVPRSIGFLSAEEVQS 151

Query: 470 -----------------PTNIFTLFG-----ILPFYLPGFMHVGIWPII-MSLSMF--IQ 504
                            P    T  G     +L F LP F+   ++    M+LS +  IQ
Sbjct: 152 FLQGRVFNVPLPAYVTMPAEQLTFLGTTREDVLSFVLPLFIVAAVFTAFNMALSTYRNIQ 211

Query: 505 MKMSPPPADKGQAMILNWM----PVVFVFALSS--FPAGLIIYWSWSNVISIVQQ----A 554
                     G      W+    P+  +    +  FP  + +YW  +N+ +  Q      
Sbjct: 212 TNDYASNISNGMFKAFLWLAVLAPLFPLVLGLTGPFPTAIALYWVANNLWTFGQTAIMHY 271

Query: 555 VIMKMHGAEIGLID 568
           +I + +       +
Sbjct: 272 IIERNYPLTEEFKE 285


>gi|85057752|ref|YP_456668.1| 60 kDa inner membrane protein [Aster yellows witches'-broom
           phytoplasma AYWB]
 gi|84789857|gb|ABC65589.1| 60 kDa inner membrane protein [Aster yellows witches'-broom
           phytoplasma AYWB]
          Length = 513

 Score = 83.5 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 79/483 (16%), Positives = 158/483 (32%), Gaps = 42/483 (8%)

Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165
             V +   S     YF  +D     ++        V N    +I   T            
Sbjct: 39  DKVVVFKNSEKHKKYFDPVDSSKLLSDYADIFVVYVINDKKKEIQISTQDEFKGMLAKKK 98

Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
                   + +       +   +   ++  +    +  +   +             A   
Sbjct: 99  EAKYFFSLIKKPDPKLKDEFNFSKLDNKEEYFLTFKTDKETTEFKNKLMKDFLTVAAGTN 158

Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           D  +   KY   E      F + +S    S+K  +      K    +++    +  +   
Sbjct: 159 DDYIENNKYQKKELRDALEFQKIDS----SNKLISVSLENIKLEDDYAENIKNTSNNVLS 214

Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
           +     N   ++P K   T        +    +             + I    ++F    
Sbjct: 215 KINVRFNNGRLMPRKLFITNFS--VPIQFTSRLEWSLFGYFWNILIISIGSFLYFFSTFL 272

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           ++          GN G+ I+L TVF++ L +P+  K    + NM  IQ +I+++++K+  
Sbjct: 273 VYGA---SGMFFGNLGLGIVLATVFIRTLTWPIYTKTSTLSMNMSLIQSEIEKVKQKYAI 329

Query: 406 SPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461
                  Q +Q  ++++Y+ +N +   G     LQ+P+F AI + +S  +     P   +
Sbjct: 330 KKDLASAQKMQLEILKVYRKNNFS-FWGFLLSFLQLPLFIAINQTLSRFI----IPGGIF 384

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-------- 513
             D     P     L  + P        + +   ++  +MFI  K+S    D        
Sbjct: 385 ATDKLIEKP--FLGLINLKPSNPNNAFVIFLLSFLVGATMFILNKISFKKPDYLKTPSYH 442

Query: 514 ----KGQA--------MIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
               + Q          I+  +M ++ VF   S P  L +YW   N  +I Q  +  K  
Sbjct: 443 LTSEQKQKAKQSEKSIKIMSVFMILMMVFFSRSNPI-LSLYWIVGNTYTIFQTLLTRKKI 501

Query: 561 GAE 563
             +
Sbjct: 502 QKK 504


>gi|70984948|ref|XP_747980.1| mitochondrial export translocase Oxa1 [Aspergillus fumigatus Af293]
 gi|66845608|gb|EAL85942.1| mitochondrial export translocase Oxa1, putative [Aspergillus
           fumigatus Af293]
          Length = 436

 Score = 83.5 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 89/243 (36%), Gaps = 38/243 (15%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390
             +   + +  +  +   + + +   G    A ++ T + ++L           ++  M 
Sbjct: 51  KNLGLDYGWGPSSIIQFFIEHIHIWGGLPWWASVVGTGILLRLALLYPTLGAVDTSTKML 110

Query: 391 NIQPKIDELREKF-------KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
           NI+P  + LR++         Q     L+  + +L++   I       P+L QIP  F  
Sbjct: 111 NIKPVTEPLRQQMIMRGKEGNQIEMLKLRAEIQKLHQEQGIVAWKSFIPML-QIPFGFGC 169

Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           Y+V+     +           W+KDL  ADP                     I P   +L
Sbjct: 170 YRVVKGMAALPVPGLTLESVAWLKDLTVADPYF-------------------ILPAASAL 210

Query: 500 SMFIQMKM------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            M++ ++       +         +++  +P +    ++ FP+ L +Y+  + +  + Q 
Sbjct: 211 FMYLSIRKGGENGVNQLQGTALGRLLMFGLPALSFLFMAFFPSALQLYFVTTGLFGLGQA 270

Query: 554 AVI 556
            ++
Sbjct: 271 YLL 273


>gi|313112535|ref|ZP_07798200.1| inner membrane protein [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310625135|gb|EFQ08425.1| inner membrane protein [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 219

 Score = 83.5 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 48/117 (41%), Gaps = 7/117 (5%)

Query: 471 TNIFTLFGILPFYLP--GFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMI---LNWMP 524
           +      GI    +P  G     + P++  ++M +   +S      + Q  +   +  MP
Sbjct: 42  SQHMNFLGIDLTRIPKLGLSLDIVLPLLSVITMLLSTHISMKASGQQMQGSMKLTMYMMP 101

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           ++++F   ++P    +Y+  SN++  VQ   +M+       +   + +  ++    +
Sbjct: 102 LMYLFFCFTYPLAFSLYYVISNIVMTVQTQ-VMRKVYDPDKMRKEIEAQIAEKKKQE 157


>gi|162448266|ref|YP_001621398.1| integral membrane protein [Acholeplasma laidlawii PG-8A]
 gi|161986373|gb|ABX82022.1| integral membrane protein [Acholeplasma laidlawii PG-8A]
          Length = 491

 Score = 83.5 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 81/485 (16%), Positives = 157/485 (32%), Gaps = 52/485 (10%)

Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162
             S I T LSP+                   +    +   N  S ++   +T +  V   
Sbjct: 23  DTSEIDTFLSPNKIVYTMDETNANGPIIETGDFEFYSIQKNKTSSRVDVASTEVTSVSLG 82

Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222
            N             Y+++     T ++ + I  S        +             F  
Sbjct: 83  NNIYEITVRGHKYNVYVYQTGYEGTVSNPNDIVVSALSPTYGVENDADKIKNVNALFFTV 142

Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
           +     L + +    + ++ +N          + KY A+   P           Y  +  
Sbjct: 143 ITNQIDLEKVQVISAQFNTKANTEVIKETGANAQKYLAT---PEN---------YEDNVF 190

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
                   + E   L        N  +  A     I+   ++       +   W W + I
Sbjct: 191 KINSNNVLSFEFHDLNDTVQVIKNLSYKPADNQLPINTKMENT-----WLGYVWDWVFII 245

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
                M        + +FG+ I+  T+ V+ + +P+  K    +  M   QP++ +L+ K
Sbjct: 246 PISFLMQFFASLFGLNSFGLGILFATIIVRTIAWPIYAKANDMSIKMAVAQPELTKLQNK 305

Query: 403 FKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +        Q+ M      LYK H I+ L GC+  +LQ+P+F A+++ +         P 
Sbjct: 306 YALKKDPASQQKMQMEMMQLYKKHGISVL-GCFTPILQMPIFLAMFQTVYRIT----VPG 360

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSP------- 509
             +  ++      N   LFG++     GF  +   +   I+ ++M++   +S        
Sbjct: 361 GMYAANVN-----NHKILFGLIDLSAGGFNDVTSYVLAAIVGVTMWLLQHLSQKKPSYAK 415

Query: 510 -------PPADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                      + QA  +      M  + V    +    L  YW   N+ SI Q   I +
Sbjct: 416 NTGTQVKTEQAEQQAKTMKTVSNVMIGMMVLTTITSVNALGFYWIIGNLFSIGQS-FINR 474

Query: 559 MHGAE 563
               +
Sbjct: 475 KLSEK 479


>gi|299537937|ref|ZP_07051223.1| membrane protein oxaA 2 precursor [Lysinibacillus fusiformis ZC1]
 gi|298726519|gb|EFI67108.1| membrane protein oxaA 2 precursor [Lysinibacillus fusiformis ZC1]
          Length = 210

 Score = 83.5 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 102/230 (44%), Gaps = 32/230 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ---- 393
              F+A+P+  L+ + ++  G++ ++++  T+ V+L+  PL  +      + K +     
Sbjct: 1   MLTFLAQPIINLIHFIHSFTGSYALSVIAITIAVRLILMPLFIRSAKHQKHSKELMTTIK 60

Query: 394 ----PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
                  D+ +    +S  +++Q+ + +L      + L GC PIL+Q+P+ F++Y  I +
Sbjct: 61  PELDALTDKYKNSQSESEKRMVQQQIQELTSASLKSSLLGCLPILIQLPILFSLYYAIKL 120

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
                         DL  A    ++   G +   +           I  L  FIQ  ++ 
Sbjct: 121 --------------DLVIASENFLWMNLGTIDIGVSM---------IACLIYFIQSCIAL 157

Query: 510 PPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
             +      I+ ++ P++ +      PA + IYW+ S ++ IVQQ +I K
Sbjct: 158 EKSQPLNMKIMVFINPIMILIFSLFNPAIIPIYWTVSALLLIVQQLIIKK 207


>gi|302207207|gb|ADL11549.1| Inner membrane protein translocase component YidC [Corynebacterium
           pseudotuberculosis C231]
 gi|302331768|gb|ADL21962.1| Inner membrane protein translocase component YidC [Corynebacterium
           pseudotuberculosis 1002]
 gi|308277460|gb|ADO27359.1| Inner membrane protein translocase component YidC [Corynebacterium
           pseudotuberculosis I19]
          Length = 318

 Score = 83.5 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 106/283 (37%), Gaps = 62/283 (21%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++ +++ +V          ++ +AIML T  ++         Q  S   
Sbjct: 1   MLNFIYWPISAILWFWHKVVSFVFDPGSGISWVLAIMLLTFTIRAFLVKPMLNQMRSARK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QP + E+R+K+     Q +     ++ K   +NP+AGC P L+Q+PVF  ++ V+ 
Sbjct: 61  MQELQPLMQEIRKKY-GKDQQKMMAETRKVQKEVGVNPIAGCLPALVQMPVFIGLFHVLR 119

Query: 449 I-------------SLEM-RHAP-FWGWIKDLAAADPTNIFTLFGILPFYLPG------- 486
                         S+E+ R  P +    +D+ +     IF +       +P        
Sbjct: 120 SFNRTGTGHSQLGLSVEVNRETPNYIFSAEDVQSFLDARIFGVPLSSYISMPADMYKAFQ 179

Query: 487 ---------FMHVGIWPIIMSLSMFIQMKMS---------------------PPPADKGQ 516
                            +I+ ++  +  ++S                         D   
Sbjct: 180 PVDFTRVNIIAVAAPLILIIVVATHMNGRLSVNRQKARRESGLQAAPTSGQMQMQMDLMN 239

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            M+L +MP+  +F    +  GL+ Y   +N+ +  QQ  I   
Sbjct: 240 KMMLWFMPLTILFTGVLWHLGLLFYMVANNIWTFFQQRWIFNK 282


>gi|317488566|ref|ZP_07947111.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp.
           1_3_56FAA]
 gi|316912308|gb|EFV33872.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp.
           1_3_56FAA]
          Length = 663

 Score = 83.5 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 29/231 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
               +A+    ++   Y+L G++ +AI+L TV +K++  PL+     ++  M  I P+++
Sbjct: 1   MLEALARLFSYIVQPCYDLTGSWWMAILLFTVIIKIVLMPLSLWCQWNSIVMVKIMPELN 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
            ++ K+      + +K  + L K H+ +PL    P+  QI V F + +VI          
Sbjct: 61  RIKVKYFGDAETIGEKQTL-LNKKHHYHPLLSLIPLAAQILVLFGLVEVIHG-------- 111

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPP-- 511
               I D  A     +    G++P    G     I P++  LS     F Q +++P    
Sbjct: 112 ----ITDHGAPGTEFL----GMVPIEDGGLSW--IMPLLAGLSAVVMGFAQNRINPLQRE 161

Query: 512 ADKGQAMILNWMPVVF-VFALSSFPAGLIIYWSWSNVISIVQQA---VIMK 558
             K +    N + +V  +       AG+  YW  SN+++IV QA   +IM+
Sbjct: 162 QSKMEKNTTNGLSIVLSLVLGVYVAAGMAFYWICSNLMAIVVQALCNLIMR 212


>gi|239632040|ref|ZP_04675071.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|239526505|gb|EEQ65506.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 320

 Score = 83.5 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 42/260 (16%)

Query: 337 GWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389
            ++  I  P+  LM +  +LV    ++GIAI++ T+ V+L+  PL  +Q           
Sbjct: 31  TFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQEKQ 90

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKT------HNINPLAGCWPILLQIPVFFAI 443
           K IQP++  ++E  K++     Q AM    +        ++ P  GC P+L+Q+P+F  +
Sbjct: 91  KIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFSGL 150

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           Y+ I+ S E+  A F+G    +       I T+   LP+ +   + +   P         
Sbjct: 151 YQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPYIVVSLIMLQGVP--------- 197

Query: 504 QMKMSPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
                       Q   +    ++ P++       + AGL +Y+    +I I+QQA++   
Sbjct: 198 ----------PEQRKAMQTTAFLNPIMTFVFCMMYNAGLGLYFGAGGIILIIQQAIVT-- 245

Query: 560 HGAEIGLIDRLRSTFSKNYN 579
           +     +  R+ +   +N  
Sbjct: 246 YVVTPNIRKRMDAEMEENPP 265


>gi|27468926|ref|NP_765563.1| lipoprotein precursor [Staphylococcus epidermidis ATCC 12228]
 gi|57865393|ref|YP_189577.1| hypothetical protein SERP2021 [Staphylococcus epidermidis RP62A]
 gi|251811869|ref|ZP_04826342.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|282875157|ref|ZP_06284030.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus
           epidermidis SK135]
 gi|293367134|ref|ZP_06613805.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|38502987|sp|Q8CMK4|OXAA1_STAES RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|81673373|sp|Q5HLG6|OXAA1_STAEQ RecName: Full=Membrane protein oxaA 1; Flags: Precursor
 gi|27316474|gb|AAO05649.1|AE016750_254 lipoprotein precursor [Staphylococcus epidermidis ATCC 12228]
 gi|57636051|gb|AAW52839.1| membrane protein, putative [Staphylococcus epidermidis RP62A]
 gi|251804666|gb|EES57323.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|281295922|gb|EFA88443.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus
           epidermidis SK135]
 gi|291318695|gb|EFE59070.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329734603|gb|EGG70914.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus
           epidermidis VCU045]
 gi|329735021|gb|EGG71318.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus
           epidermidis VCU028]
          Length = 278

 Score = 83.5 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 100/270 (37%), Gaps = 43/270 (15%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           E      ++    K M   + +       N+G AI+   + V+ +  P    Q  +   M
Sbjct: 24  EENQTGIFYNVFVKSMDGFLHFLGRVFQDNYGFAIISIVLIVRFILLPFMLIQVKNMHMM 83

Query: 390 KNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIP 438
           +     +          ++    Q       + +++ Y+++ INP   + GC P+L+Q+P
Sbjct: 84  REKTKVVQPELDAIRDKMKHATSQEERNAANQLLMKKYQSYGINPLKNMLGCLPVLIQMP 143

Query: 439 VFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           +   +Y  +    S  +   P + W  DL   D                      I  II
Sbjct: 144 ILMGLYMSLKYPSSHGITEYPHFLWF-DLTQPD---------------------LIMTII 181

Query: 497 MSLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            ++  F+Q  ++     K Q      ++ + P+   +A     A L +YWS S    IVQ
Sbjct: 182 AAIMYFVQPLVNSIHYPKDQRKTYYFMMVFSPIFITYASLHSAAALGLYWSISAAFLIVQ 241

Query: 553 QAVIMKMHGAEIGLID--RLRSTFSKNYNS 580
                  H  ++ L +  +L+    +N ++
Sbjct: 242 MHF-AHSHYKKVALHEAKKLKQKLEQNKDN 270


>gi|255505832|ref|ZP_05348364.3| membrane protein OxaA [Bryantella formatexigens DSM 14469]
 gi|255265692|gb|EET58897.1| membrane protein OxaA [Bryantella formatexigens DSM 14469]
          Length = 427

 Score = 83.1 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 15/153 (9%)

Query: 440 FFAIYKVISISLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           F  I  VI+ + E +RH  ++  I     AD        G         +     PI+  
Sbjct: 200 FPGIADVINSTAENVRHINYFLGIN---IADSPMSIIQTGWSEKDFLAIIVALAIPILAG 256

Query: 499 LSMFIQMKMSPPPADKGQ----------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
           L+ F+  K++P  +                +   MP++ VF   +F  G+ IYW   +V+
Sbjct: 257 LTQFLSTKLTPQQSSNTGTEENTMTSSLKTMNTIMPLMSVFFCFTFSVGIGIYWVAGSVV 316

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             V Q ++ +   ++I + + ++    K    +
Sbjct: 317 RCVIQVIVNR-QVSKIDVDELVKKNLEKYNEKR 348



 Score = 52.7 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 5/122 (4%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F +        FI   +++ +      + N GI I+L TV V LL  P+  K   S+  M
Sbjct: 9   FIIGPFATVLGFIMNGIYLFLDGALG-IQNIGICIILFTVIVNLLLLPMTIKTQKSSKMM 67

Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           +   P+I  L++K+K    Q     + +    LY  + I+    C P+L+Q P+  A+Y+
Sbjct: 68  QVANPEIQALQKKYKNKTDQASQMKMYEEQQALYAKYGISMSGQCLPLLIQFPILLAMYQ 127

Query: 446 VI 447
           VI
Sbjct: 128 VI 129


>gi|300859524|ref|YP_003784507.1| hypothetical protein cpfrc_02107 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686978|gb|ADK29900.1| putative membrane protein [Corynebacterium pseudotuberculosis
           FRC41]
          Length = 318

 Score = 83.1 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 55/283 (19%), Positives = 111/283 (39%), Gaps = 62/283 (21%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++ +++ +V          ++ +AIML T  ++         Q  S   
Sbjct: 1   MLNFIYWPISAILWFWHKVVSFVFDPGSGISWVLAIMLLTFTIRAFLVKPMLNQMRSARK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QP + E+R+K+     Q +     ++ K   +NP+AGC P L+Q+PVF  ++ V+ 
Sbjct: 61  MQELQPLMQEIRKKY-GKDQQKMMAETRKVQKEVGVNPIAGCLPALVQMPVFIGLFHVLR 119

Query: 449 I-------------SLEM-RHAPFWGWIKD--------------LAAA--DPTNIFTLFG 478
                         S+E+ R  P + +  +              L++    P +++  F 
Sbjct: 120 SFNRTGTGHSQLGLSVEVNRETPNYIFSAEDVQSFLDARIFGVPLSSYISMPADMYKAFQ 179

Query: 479 ILPFYLPGFMHVGI-WPIIMSLSMFIQMKMS---------------------PPPADKGQ 516
            + F     + V     +I+ ++  +  ++S                         D   
Sbjct: 180 PIDFTRVNIIAVAAPLILIIVVATHMNGRLSVNRQKARRESGLQAAPTSGQMQMQMDLMN 239

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
            M+L +MP+  +F    +  GL+ Y   +N+ +  QQ  I   
Sbjct: 240 KMMLWFMPLTILFTGVLWHLGLLFYMVANNIWTFFQQRWIFNK 282


>gi|293376114|ref|ZP_06622364.1| putative stage III sporulation protein J [Turicibacter sanguinis
           PC909]
 gi|292645268|gb|EFF63328.1| putative stage III sporulation protein J [Turicibacter sanguinis
           PC909]
          Length = 263

 Score = 83.1 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           F+      +   +  L  N G+AI+L T  V+L+  PL  K   ++A M+ IQP++ +++
Sbjct: 41  FVLPLATFITFLYNLLNQNLGLAIILATAIVRLVLMPLYLKSNKTSAIMQEIQPEMQQIQ 100

Query: 401 EKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +K++    Q     +Q  M+ LYK +N NP+ GC    LQ+PVF A Y+ IS     RH 
Sbjct: 101 KKYENKTDQASQVKMQTEMMDLYKKYNFNPMMGCILPFLQMPVFLAFYQAIS-----RH- 154

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSMFIQMKMSPPPA--- 512
                IKD AA++       F  +       +   I  +I   +S++ Q  M+       
Sbjct: 155 ---PLIKDAAASE-------FLGVNLGATVQLANWILALIVAGISIYSQRLMNKSMMTNS 204

Query: 513 -------DKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
                        ++  +MP        + P    +Y+   +V+ I+Q  ++ +  
Sbjct: 205 SAQQNKTSNMMMKVMTYYMPFAMFSITIATPFAFGLYFLTGSVMQIIQFFIVKRST 260


>gi|207110019|ref|ZP_03244181.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori HPKX_438_CA4C1]
          Length = 136

 Score = 83.1 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 60/131 (45%), Positives = 90/131 (68%), Gaps = 1/131 (0%)

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           P    +I++G   F AK +F+L+ Y Y  VGN+G AI+L T+ V+++ +PL+ K  VS  
Sbjct: 7   PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQ 66

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
            +K + PK+ EL+EK+K   PQ LQ  M+QLYK H  NPL GC P++LQIPVFFAIY+V+
Sbjct: 67  KLKELAPKMKELQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 125

Query: 448 SISLEMRHAPF 458
             ++E++ + +
Sbjct: 126 YNAVELKSSEW 136


>gi|297742331|emb|CBI34480.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score = 83.1 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 107/301 (35%), Gaps = 36/301 (11%)

Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325
           +    F + F+        +Q    ++    +       +  +   A+    +       
Sbjct: 59  NTSGGFGAFFQGKGFSPLSHQVAVGSSYSRYMSTAIGEGSENIGVIAETPVDLIANATVD 118

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV 384
                E+ I     +F+   +  L+   ++  G ++  +I LTT+ ++ +  PL   Q  
Sbjct: 119 VAS--EVSIAAADSFFLVGILQHLIGGVHSYTGLSWAASIALTTLLIRGMTVPLLVNQLK 176

Query: 385 STANMKNIQPKIDELREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
           ST+ +  ++P ++ +RE+ +    +        K M Q++K + + P      +++Q PV
Sbjct: 177 STSKLTLMRPHLEAIREEMQAKGMEPSAVAEGNKRMQQIFKEYGVTPFTPLKGLIIQGPV 236

Query: 440 FFAIYKVISISLE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           F + +  IS  ++           W  DL   D                      I PI+
Sbjct: 237 FVSFFLGISNMVQKVPSFKTGGALWFTDLTTPDSFY-------------------IMPIL 277

Query: 497 MSLSMFIQMKMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
             L+  I ++ +        P           +  + V    +F  G+  YW  SN+ S+
Sbjct: 278 AGLTFLITVEFNMQDGMQGNPTAGTMKKFSRALAFLSVPFTMNFAQGIFCYWIPSNLFSL 337

Query: 551 V 551
            
Sbjct: 338 A 338


>gi|146421675|ref|XP_001486782.1| hypothetical protein PGUG_00159 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 361

 Score = 83.1 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 89/240 (37%), Gaps = 23/240 (9%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMK 390
             I     +     +   +   +   G      I+  TV V+ + FPL  K  ++ A M 
Sbjct: 73  DSIGMAQGWGPTSLVERFLELTHVYTGLPWWGTIIAATVAVRAVMFPLYVKSSINAAKMT 132

Query: 391 NIQPK----IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL---LQIPVFFAI 443
            ++P+    + +LRE                L K H+I+     +P+L   L    F A+
Sbjct: 133 KVKPELDQIMKDLREAENPQEQVQAAHKRKALMKQHDIHMSHQMFPLLQLPLAYGFFQAL 192

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
            K+ +  +E   +  + W +DL   DP     +             + +  + +      
Sbjct: 193 RKMANFPVEGFSSQGYAWFEDLTQVDPYCGLQVIAA---------GIVVLMVRIGGET-- 241

Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                    +     ++ ++P+  +F    F A +++Y++ +++ S VQ  V+   +  +
Sbjct: 242 ----GAATMNPMLKKVMTYVPIASIFITKEFSAAVVLYFAINSMASFVQALVLRNKYFRK 297


>gi|190344393|gb|EDK36061.2| hypothetical protein PGUG_00159 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 361

 Score = 83.1 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 89/240 (37%), Gaps = 23/240 (9%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMK 390
             I     +     +   +   +   G      I+  TV V+ + FPL  K  ++ A M 
Sbjct: 73  DSIGMAQGWGPTSLVERFLELTHVYTGLPWWGTIIAATVAVRAVMFPLYVKSSINAAKMT 132

Query: 391 NIQPK----IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL---LQIPVFFAI 443
            ++P+    + +LRE                L K H+I+     +P+L   L    F A+
Sbjct: 133 KVKPELDQIMKDLREAENPQEQVQAAHKRKALMKQHDIHMSHQMFPLLQLPLAYGFFQAL 192

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
            K+ +  +E   +  + W +DL   DP     +             + +  + +      
Sbjct: 193 RKMANFPVEGFSSQGYAWFEDLTQVDPYCGLQVIAA---------GIVVLMVRIGGET-- 241

Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                    +     ++ ++P+  +F    F A +++Y++ +++ S VQ  V+   +  +
Sbjct: 242 ----GAATMNPMLKKVMTYVPIASIFITKEFSAAVVLYFAINSMASFVQALVLRNKYFRK 297


>gi|114652030|ref|XP_001156574.1| PREDICTED: oxidase (cytochrome c) assembly 1-like isoform 1 [Pan
           troglodytes]
          Length = 387

 Score = 83.1 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 28/154 (18%)

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIK 463
                  M    K H I         + Q P+F + +  +     +           W +
Sbjct: 147 YYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPSLQTGGLWWFQ 206

Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----QAM 518
           DL  +DP                   + I P+ ++ +M+  +++      +         
Sbjct: 207 DLTVSDP-------------------IYILPLAVTATMWAVLELGAETGVQSSDLQWMRN 247

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           ++  MP++ +     FP  + +YW  SN+ S+VQ
Sbjct: 248 VIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 281


>gi|116495158|ref|YP_806892.1| preprotein translocase subunit YidC [Lactobacillus casei ATCC 334]
 gi|116105308|gb|ABJ70450.1| Preprotein translocase subunit YidC [Lactobacillus casei ATCC 334]
          Length = 329

 Score = 83.1 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 42/260 (16%)

Query: 337 GWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389
            ++  I  P+  LM +  +LV    ++GIAI++ T+ V+L+  PL  +Q           
Sbjct: 43  TFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQEKQ 102

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKT------HNINPLAGCWPILLQIPVFFAI 443
           K IQP++  ++E  K++     Q AM    +        ++ P  GC P+L+Q+P+F  +
Sbjct: 103 KIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFSGL 162

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           Y+ I+ S E+  A F+G    +       I T+   LP+ +   + +   P         
Sbjct: 163 YQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPYIVVSLIMLQGVP--------- 209

Query: 504 QMKMSPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
                       Q   +    ++ P++       + AGL +Y+    +I I+QQA++   
Sbjct: 210 ----------PEQRKAMQTTAFLNPIMTFVFCMMYNAGLGLYFGAGGIILIIQQAIVT-- 257

Query: 560 HGAEIGLIDRLRSTFSKNYN 579
           +     +  R+ +   +N  
Sbjct: 258 YIVTPNIRKRMDAEMEENPP 277


>gi|295099702|emb|CBK88791.1| protein translocase subunit yidC [Eubacterium cylindroides T2-87]
          Length = 330

 Score = 83.1 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 97/260 (37%), Gaps = 38/260 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F   I  GWF  +       +        + G+ I++TT+ ++L+ F   +K  +S+  M
Sbjct: 83  FSEAIADGWFDGLIVWPIAQIINTIASYTDAGVGIIVTTLLIQLIVFMFTRKSQMSSQRM 142

Query: 390 KNIQPKIDE----LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + IQP++ +     ++K       ++ +    LYK ++I+P      + +Q+P+   +Y 
Sbjct: 143 QEIQPEMQKIQNKYKDKTDDRSKMMMYQETQNLYKKYDIHPFGSILVMFIQLPIMMGMYY 202

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  + +  F+G            +      +  +        I  ++M +   + M
Sbjct: 203 ATMRAASVVYGSFFG------------LPFSGTPIDGFTQMQFGYIIIYVLMIVCQLLSM 250

Query: 506 KM----------------------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
           KM                      +           + +   +  F   S+P  +  YW 
Sbjct: 251 KMPQILKKIQDKKDHVKEKKYAEENQNSMMNTMNTTMYFSTAMIAFLYISWPIAMSFYWL 310

Query: 544 WSNVISIVQQAVIMKMHGAE 563
            S++I I+Q  V+ K+   +
Sbjct: 311 VSSIIRIIQSVVLHKIMNKD 330


>gi|224142675|ref|XP_002324680.1| inner membrane protein [Populus trichocarpa]
 gi|222866114|gb|EEF03245.1| inner membrane protein [Populus trichocarpa]
          Length = 310

 Score = 82.7 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 91/229 (39%), Gaps = 22/229 (9%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           E+ I     +     +   +   +N    N+  +I++TT+ ++    PL   Q  +T+ +
Sbjct: 5   EVAIAAADSFLPVAVLQHAIDAVHNFTGFNWWASIVVTTLLIRSFTLPLLINQLKATSKL 64

Query: 390 KNIQPKIDELREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
             ++P ++E++++ ++           QK M +L+K H ++P      + +Q PVF + +
Sbjct: 65  SIVRPHLEEVKQRVERQGMDPTAVSEGQKEMKKLFKEHGVSPFTPLKGLFIQAPVFISFF 124

Query: 445 KVISISLE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501
             I+   E      +    W  DL  AD   IF +   L F +    +            
Sbjct: 125 LAITNMAEKVPSFKSGGAFWFVDLTTADDLYIFPVLTALTFLITVECNT----------- 173

Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
             Q  M   PA      +   +    V    SFP  +  YW  SN+ S+
Sbjct: 174 --QEGMEGNPAAGTMKNVSRALAAASVPLTMSFPKAIFCYWITSNLFSL 220


>gi|256850849|ref|ZP_05556238.1| preprotein translocase subunit YidC [Lactobacillus jensenii
           27-2-CHN]
 gi|260661060|ref|ZP_05861974.1| preprotein translocase subunit YidC [Lactobacillus jensenii
           115-3-CHN]
 gi|282934480|ref|ZP_06339735.1| putative membrane protein [Lactobacillus jensenii 208-1]
 gi|297205723|ref|ZP_06923118.1| membrane protein OxaA [Lactobacillus jensenii JV-V16]
 gi|256615911|gb|EEU21099.1| preprotein translocase subunit YidC [Lactobacillus jensenii
           27-2-CHN]
 gi|260547997|gb|EEX23973.1| preprotein translocase subunit YidC [Lactobacillus jensenii
           115-3-CHN]
 gi|281301427|gb|EFA93716.1| putative membrane protein [Lactobacillus jensenii 208-1]
 gi|297148849|gb|EFH29147.1| membrane protein OxaA [Lactobacillus jensenii JV-V16]
          Length = 324

 Score = 82.7 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 97/254 (38%), Gaps = 32/254 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK----- 390
           + +     + + +            G AI + T  ++ +  PL       +   +     
Sbjct: 44  YQFIGIPIRNIMLATENAIGGTNGAGWAIAIITAVIRFVLLPLMLSSSKKSTIQQEKVSR 103

Query: 391 ---NIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIY 444
                +   D L+++      Q+   +   ++Y+ +N++     GC P+++Q P    IY
Sbjct: 104 LQDQFKLIQDALKDRSLTPDKQMQISQLQQKVYRENNLSITGGIGCLPLIVQFPFMIGIY 163

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           + ++ S  +  + F+G    ++   P+ +F + G L +     + +        +S   Q
Sbjct: 164 QAVAYSDALYKSSFFG----VSLGKPSLLFAIVGALFYLAQSLLMLR------GVS--EQ 211

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +         Q+ I    P++ +F   S P  L +Y+    +I+++QQ ++   +    
Sbjct: 212 QR------AAMQSTIF-ISPLMTLFISMSTPGALGLYFLVGGIIALIQQVIVT--YIILP 262

Query: 565 GLIDRLRSTFSKNY 578
               ++ +   +  
Sbjct: 263 RAKAKIDAELKEKP 276


>gi|159126095|gb|EDP51211.1| mitochondrial export translocase Oxa1, putative [Aspergillus
           fumigatus A1163]
          Length = 436

 Score = 82.7 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 88/239 (36%), Gaps = 38/239 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
             + +  +  +   + + +   G    A ++ T + ++L           ++  M NI+P
Sbjct: 55  LDYGWGPSSIIQFFIEHIHIWGGLPWWASVVGTGILLRLALLYPTLGAVDTSTKMLNIKP 114

Query: 395 KIDELREKF-------KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             + LR++         Q     L+  + +L++   I       P+L QIP  F  Y+V+
Sbjct: 115 VTEPLRQQMIMRGKEGNQIEMLKLRAEIQKLHQEQGIVAWKSFIPML-QIPFGFGCYRVV 173

Query: 448 SISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
                +           W+KDL  ADP                     I P   +L M++
Sbjct: 174 KGMAALPVPGLTLESVAWLKDLTVADPYF-------------------ILPAASALFMYL 214

Query: 504 QMKM------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            ++       +         +++  +P +    ++ FP+ L +Y+  + +  + Q  ++
Sbjct: 215 SIRKGGENGVNQLQGTALGRLLMFGLPALSFLFMAFFPSALQLYFVTTGLFGLGQAYLL 273


>gi|218191963|gb|EEC74390.1| hypothetical protein OsI_09733 [Oryza sativa Indica Group]
          Length = 446

 Score = 82.7 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 28/151 (18%)

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE---MRHAPFWGWIKDLAAADPTNI 473
           +L+  H + PL     + +Q P+F + +  IS  +E           W  DL   D    
Sbjct: 246 ELFLRHGVTPLTPLKGLFIQAPIFMSFFFAISNMVEKVPSFKGGGIYWFTDLTTPD---- 301

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMILNW---MPVVF 527
                           + I P++ SL+  + ++++       +     + N+   M V+ 
Sbjct: 302 ---------------ELLILPMLTSLTFLVTVELNMQDGMEGNPMLKTMKNFSRVMAVLT 346

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           +    SFP  +  YW  SN+ S+    V+ K
Sbjct: 347 IPFTMSFPKAIFFYWVTSNLFSLGYGFVLRK 377


>gi|210619554|ref|ZP_03292045.1| hypothetical protein CLONEX_04279 [Clostridium nexile DSM 1787]
 gi|210148841|gb|EEA79850.1| hypothetical protein CLONEX_04279 [Clostridium nexile DSM 1787]
          Length = 247

 Score = 82.7 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 11/103 (10%)

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFA 530
            F +   +     P++  LS +I  K+             P       ++N MP++ VF 
Sbjct: 76  NFSIGLIIVALAIPVLSGLSQWISAKLMQQATSTGNDDDNPMAAQMKTMMNVMPLISVFM 135

Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
             S PAGL IYW  S V+  +QQ VI K    +  + + +   
Sbjct: 136 CFSMPAGLGIYWIASAVVRTIQQLVINKFLSKK-SMDELIEEN 177


>gi|169826543|ref|YP_001696701.1| membrane protein oxaA 2 [Lysinibacillus sphaericus C3-41]
 gi|168991031|gb|ACA38571.1| Membrane protein oxaA 2 precursor [Lysinibacillus sphaericus C3-41]
          Length = 210

 Score = 82.7 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 99/230 (43%), Gaps = 32/230 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            F F+ +P+   + + ++  G++ I ++  T+ V+++  PL  K      + K +   I 
Sbjct: 1   MFTFLTQPIIYFIHFIHSFTGSYAIGVISITIAVRVILMPLFIKSAKHQKHSKELMTVIK 60

Query: 398 E--------LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
                    L+    +S    +Q+ + +L      + L GC PI++Q+PV F++Y  I +
Sbjct: 61  PELDVLTAKLKNSNDESEKITVQQKIQELTSDSLKSSLLGCLPIIIQLPVLFSLYYAIKL 120

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
              +     + W+                       G + +GI  II  +  F+Q  +S 
Sbjct: 121 DTVIASE-NFLWMN---------------------LGTVDIGI-SIIACVIYFMQSWLSL 157

Query: 510 PPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
                    +L ++ P++ +      PA + IYW+ S ++ ++QQ +I K
Sbjct: 158 DKNQPMNVKVLVFINPIMILIFSLFNPAIIPIYWTVSALLLMIQQLIIKK 207


>gi|296111276|ref|YP_003621658.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154]
 gi|295832808|gb|ADG40689.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154]
          Length = 306

 Score = 82.3 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 93/265 (35%), Gaps = 43/265 (16%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNL---VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
                + +I  P+  +M+        V   G AI++ TV ++L+  P    Q ++T   +
Sbjct: 26  QHSRMYRWIGHPLADIMASIAQFIGGVNGIGWAIIIITVILRLVLLPFFLNQQINTTINQ 85

Query: 391 NIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440
                +           R+       Q    AM+ LY+ ++++ + G     + +Q+P+F
Sbjct: 86  IKMQTLKPEIDKLQALTRKAGTTQEQQQASMAMMSLYRENDVSVIGGISFLTMAMQLPIF 145

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             +Y  I  +  ++ A F G+  DL                          I+ +   + 
Sbjct: 146 SGLYSAILHAPALQGATFLGF--DLGKP---------------------QIIFAVAAGIV 182

Query: 501 MFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             IQ  ++     + Q      ++   PV+           + +Y+    + +++Q  + 
Sbjct: 183 YLIQAWLAMQHMPEEQKKTSAAMIFISPVMIFVFAMIASGAIGLYFVIGGLFALLQTLI- 241

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581
              H    GL  R+   F     + 
Sbjct: 242 --QHFQRPGLEKRVAREFKIKKTAD 264


>gi|227892815|ref|ZP_04010620.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           ultunensis DSM 16047]
 gi|227865456|gb|EEJ72877.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           ultunensis DSM 16047]
          Length = 324

 Score = 82.3 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 98/258 (37%), Gaps = 43/258 (16%)

Query: 339 FYFIAKPMFMLMSYFYNLV-------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           + ++ KP+  +M +  +++           I  ++  V +  L      K       M  
Sbjct: 43  YQWLGKPLQNIMIHTAHMIGGQNGAGWGIVIITVVVRVILMPLMLIQQNKSVRQQEKMAR 102

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-------LAGCWPILLQIPVFFAIY 444
           +QP++  ++   K       Q+  +  ++    +          GC P+++Q+P+ + IY
Sbjct: 103 LQPQMKLIQAAMKHKGITPQQQMTLSGWQRELYSKNEMSLTGGIGCLPLIIQLPIMWGIY 162

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           + +  S ++ H+ F+G    L+                         +  II ++   IQ
Sbjct: 163 QAVFYSPQLAHSTFFG--ISLSQK---------------------SLVLAIIATVFTVIQ 199

Query: 505 MKMS----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
             +S    P    K    ++ + P++ +F   SF   L +YW+  N++ IVQQ ++  + 
Sbjct: 200 GYISLIGIPEEQKKTMQSMMLFNPIMTLFFSLSFSGALALYWAAGNLVMIVQQIIVTFIL 259

Query: 561 GAEIGLIDRLRSTFSKNY 578
                +   + +      
Sbjct: 260 T--PQVKKHVANEIKDKP 275


>gi|291457891|ref|ZP_06597281.1| membrane protein OxaA [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291419435|gb|EFE93154.1| membrane protein OxaA [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 436

 Score = 82.3 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 11/116 (9%)

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMF----IQMKMSPPPAD------KGQAMILNWM 523
             L      Y        + PI+  L+ +    +  K +   AD      +    +   M
Sbjct: 243 LNLSTAPSSYGLRPTIYWLIPILAGLTQWASTILMQKQNMAAADGSDQSAQMMKSMNIMM 302

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           P++ V+   SF +G+ +YW  S++  ++QQ  +    G +    + L+ + +K   
Sbjct: 303 PLMSVYFCFSFASGIGLYWIASSLFMLIQQLALNWFFGKKTN-EELLQESMAKANA 357



 Score = 53.8 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 4/131 (3%)

Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382
               IP F  + +            + +      + N G+AI+L T+  ++L FP + KQ
Sbjct: 7   NTSNIPLFGPIWNLIVTILGLIMNAIYVFLDRIGIPNIGLAIILFTLVTRILLFPTSLKQ 66

Query: 383 YVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438
             S+  M+ +QP+I  ++EK+K           Q  M  +Y+ +  +  +GC P++LQ+P
Sbjct: 67  QKSSRMMQVMQPEIKAIQEKYKNKSDNASMMAQQTEMKAVYEKYGTSMTSGCLPLVLQLP 126

Query: 439 VFFAIYKVISI 449
           + FA+Y++I  
Sbjct: 127 IIFALYRIIMN 137


>gi|50405829|ref|XP_456555.1| DEHA2A05368p [Debaryomyces hansenii CBS767]
 gi|49652219|emb|CAG84510.1| DEHA2A05368p [Debaryomyces hansenii]
          Length = 374

 Score = 82.3 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 87/230 (37%), Gaps = 23/230 (10%)

Query: 342 IAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK----I 396
               +  L+ Y +   G      I++TTV V+ + FPL  K  ++ A M  I+P+    +
Sbjct: 93  PTALIERLLEYSHVYTGLPWWATIIVTTVAVRSVMFPLYVKASINGAKMAKIKPELDQVM 152

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL---LQIPVFFAIYKVISISLEM 453
            ELRE                L K ++++     +P+L   +    F  + K+ +  +E 
Sbjct: 153 QELREAENPQEQVQAAHKRKALMKDNDVHMSHQMFPVLQLPIAYGFFQGLRKMANHPVEG 212

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
                  W  DL   DP     +             V +  + +               +
Sbjct: 213 FSTQGNAWFADLTQVDPYCGLQIISA---------AVVVSMVRLGGET------GAAAMN 257

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                ++ ++P++ +F      A +++Y++ +++ S +Q  V+   +  +
Sbjct: 258 PMMKKVMTYVPILSIFITKELSAAVVLYFAANSIFSFIQALVLRNKYFRK 307


>gi|313124172|ref|YP_004034431.1| preprotein translocase subunit yidc [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
 gi|312280735|gb|ADQ61454.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
          Length = 320

 Score = 82.3 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 93/268 (34%), Gaps = 39/268 (14%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYV 384
                G +Y+I + + + + +    + +        G AI++ T+ V+++  PL   Q  
Sbjct: 35  KAPASGPYYWIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLGVRVILMPLMLSQQH 94

Query: 385 STANMKNIQPKIDELREK---------FKQSPPQVLQKAMIQLYKTHNINPL--AGCWPI 433
                +     +    +                  L     ++Y  +N++     GC P+
Sbjct: 95  KATLQQEKMHLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPL 154

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+P+   IY+ ++ S  +  + F+G                   +       +   I 
Sbjct: 155 LIQMPIMIGIYQAVAYSNALAKSTFFG-------------------ISLSSKSMVLAIIA 195

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            +   +  ++ M   P    K     +   P++  F   SF   L +YW+  N++ ++QQ
Sbjct: 196 TVFALIQSYVAMIGIPEEQKKTMQATMLMNPIMTFFFSMSFSGALALYWAVGNLVMVIQQ 255

Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            +       +     R+      +   +
Sbjct: 256 LITT--FIVQPRAKKRVSKELEDSPIVE 281


>gi|255074419|ref|XP_002500884.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299]
 gi|226516147|gb|ACO62142.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299]
          Length = 223

 Score = 82.3 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 90/238 (37%), Gaps = 50/238 (21%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ-----SPPQVLQ 412
             +  AIM TT  +++   P    Q    A M   +P+I+ L  + K            Q
Sbjct: 6   MEWWAAIMATTAIMRVFVMPFMVMQQRVAARMHIAKPEIEALNARIKGMGGDQQVMAEAQ 65

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-----W------ 461
           K +  ++K HN NP     PI +Q P+F + Y  IS     +  P +      W      
Sbjct: 66  KEIFAIWKKHNCNPAYMMLPIAVQAPLFISFYFAISEMA--KGVPSFASGGPDWPLGPIS 123

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM----SPPPADKGQA 517
           + DL AADPT                    I P++ S +    +++    +P  +   Q 
Sbjct: 124 MHDLTAADPTY-------------------IMPVLSSATFLATVELGGAGNPETSGAAQQ 164

Query: 518 MILN-----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV----IMKMHGAEIGL 566
            ++       + V  +   + F  G+ +YW  +N+ S+ Q       ++K   A   +
Sbjct: 165 TMMTKWGLRALSVALIPMTAGFSKGVFVYWITTNMFSLGQTLAFKVPLIKKIVAIPEI 222


>gi|325473998|gb|EGC77186.1| hypothetical protein HMPREF9353_01536 [Treponema denticola F0402]
          Length = 894

 Score = 82.0 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 16/207 (7%)

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMKNIQPKIDELREKFK 404
            +  F     N G AI++ ++FV ++  P+     + Q       K ++ KI +++  FK
Sbjct: 21  FLVAFKIFNENVGGAIVIVSLFVNIVTLPIYAAAEEWQNKERLLQKRLKNKIKDIKAVFK 80

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
                ++  A  +    H +  L G + +L QIP F A Y  +S  L +     + ++ +
Sbjct: 81  GDERYMILSAYYRQNNYHPLYSLRGMFGLLFQIPFFIAAYHFLSE-LALLQGSGFLFLDN 139

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L   D                    +   PI+M+L   + + +        + + L  M 
Sbjct: 140 LGKPD-----------ALLNILSYKINFLPILMTLVNLLSVMIYTKNFSIKEKIQLYIMA 188

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIV 551
           ++F+F L + P+GL+ YW+ +N+ S+ 
Sbjct: 189 IIFLFLLYNSPSGLVFYWTLNNIFSLF 215


>gi|149063881|gb|EDM14151.1| rCG23545, isoform CRA_b [Rattus norvegicus]
          Length = 266

 Score = 82.0 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 63/176 (35%), Gaps = 28/176 (15%)

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
              M+    +I E +    Q+        M    K H+I         L Q P+F + + 
Sbjct: 1   MPEMQKFSARIREAKLSGDQAEFYKATIEMTHYQKKHDIKFFRPLILPLTQAPIFISFFI 60

Query: 446 VISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501
            +     +           W +DL  +DP                   + + P++++ +M
Sbjct: 61  ALREMANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATM 101

Query: 502 F----IQMKMSPPPAD-KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +    +  +     +D +    ++  MP+  +     FP+ + +YW  SNV S+ Q
Sbjct: 102 WGVLELGAETGMQSSDLQLMRNVIRVMPLAVLPVTIHFPSAVFMYWLSSNVFSLCQ 157


>gi|291444979|ref|ZP_06584369.1| membrane protein [Streptomyces roseosporus NRRL 15998]
 gi|291347926|gb|EFE74830.1| membrane protein [Streptomyces roseosporus NRRL 15998]
          Length = 246

 Score = 82.0 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 21/204 (10%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
             +   AI+L T  V+L   PL++           +QP+I ELR+K     P+ +QKA++
Sbjct: 15  TASTAAAIILFTALVRLAVHPLSRAAARGQKARSRLQPQIAELRKKH-GRNPERMQKAIM 73

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD-LAAA-DPTNIF 474
           +L+    ++PL+GC P LLQ+P FF +Y  +  S  +   P      D L A        
Sbjct: 74  ELHAAEKVSPLSGCLPSLLQMPAFFLLYH-LFSSSSIGGEPNALLSHDLLGAPLGGRWHD 132

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMF------IQMKMSPPPAD--------KGQAMIL 520
            L    PF   G +++G++ I+ +++ F       QM  +P             G   + 
Sbjct: 133 ALAHGGPFGGQGLVYLGLFVIVAAVATFSYGRTKRQMAANPMTPAAGPDGQPVPGMGAMT 192

Query: 521 NWMPVVFVFALSS---FPAGLIIY 541
             MP++  F L +    P    +Y
Sbjct: 193 KLMPLLSFFTLITVAVVPLAAALY 216


>gi|225426348|ref|XP_002270313.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 445

 Score = 82.0 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 107/301 (35%), Gaps = 36/301 (11%)

Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325
           +    F + F+        +Q    ++    +       +  +   A+    +       
Sbjct: 59  NTSGGFGAFFQGKGFSPLSHQVAVGSSYSRYMSTAIGEGSENIGVIAETPVDLIANATVD 118

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV 384
                E+ I     +F+   +  L+   ++  G ++  +I LTT+ ++ +  PL   Q  
Sbjct: 119 VAS--EVSIAAADSFFLVGILQHLIGGVHSYTGLSWAASIALTTLLIRGMTVPLLVNQLK 176

Query: 385 STANMKNIQPKIDELREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
           ST+ +  ++P ++ +RE+ +    +        K M Q++K + + P      +++Q PV
Sbjct: 177 STSKLTLMRPHLEAIREEMQAKGMEPSAVAEGNKRMQQIFKEYGVTPFTPLKGLIIQGPV 236

Query: 440 FFAIYKVISISLE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           F + +  IS  ++           W  DL   D                      I PI+
Sbjct: 237 FVSFFLGISNMVQKVPSFKTGGALWFTDLTTPDSFY-------------------IMPIL 277

Query: 497 MSLSMFIQMKMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
             L+  I ++ +        P           +  + V    +F  G+  YW  SN+ S+
Sbjct: 278 AGLTFLITVEFNMQDGMQGNPTAGTMKKFSRALAFLSVPFTMNFAQGIFCYWIPSNLFSL 337

Query: 551 V 551
            
Sbjct: 338 A 338


>gi|255731476|ref|XP_002550662.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240131671|gb|EER31230.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 378

 Score = 82.0 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 101/255 (39%), Gaps = 33/255 (12%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     +  L+ + +   G      I+   V +++  FPL  K   +   M  I+P+++ 
Sbjct: 95  WGPTSIIERLLEFTHVYTGLPWWGTIITAAVAIRIFIFPLYVKASANATKMSKIKPEMEA 154

Query: 399 LREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV----FFAIYKVISISL 451
           + ++ K   Q+      +   +L K H+++ LA     L+QIP     F A+ K+ + ++
Sbjct: 155 IMDEIKAGGQAEQMKAMEKRRKLMKKHDVSMLAS-VYPLVQIPFAYGFFQALRKMANANV 213

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSMFIQMKMSPP 510
           E      + W ++L   DP             L     + I  I+ M             
Sbjct: 214 EGFSDQGYAWFQNLIEVDPY----------LGLHAISCLAIMSIVRMGGET------GQA 257

Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA-----VIMKMHGAEIG 565
              KG   ++  +P+  +    +F A +++Y++ ++V+S++Q          K  G    
Sbjct: 258 TMAKGMQKLMYVLPLASIVITKNFAACVMVYFAANSVLSLIQSLIFKSSFFRKALGMPPK 317

Query: 566 LIDRLRSTFSKNYNS 580
           L   ++   + N  +
Sbjct: 318 LT--IQQLQANNPKA 330


>gi|213407522|ref|XP_002174532.1| mitochondrial inner membrane translocase Oxa101
           [Schizosaccharomyces japonicus yFS275]
 gi|212002579|gb|EEB08239.1| mitochondrial inner membrane translocase Oxa101
           [Schizosaccharomyces japonicus yFS275]
          Length = 361

 Score = 82.0 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 105/306 (34%), Gaps = 37/306 (12%)

Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
           F+YL          +  +      G+S   +  +   +     + H      I       
Sbjct: 7   FRYLKQHRFHVGRPYKLSLGIKYRGQSFRVS-QIRLQSTAPTNLVHSNLAADIIASNSTG 65

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
               ++  A     +          +  +I+LTT+ ++ L  PL  +   +   + +IQP
Sbjct: 66  ISHSYWPYAFIQNAVNGIHCISGAPWWASIILTTIGIRSLMLPLTLRSMKNARALSHIQP 125

Query: 395 KIDEL-------REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           ++ +        + +           A+ ++Y+++NINPL      ++Q  VF + +  +
Sbjct: 126 RVKKYVDAMKAAKLENDTYAVTQNAYAIQKIYRSNNINPLTVAISPIIQATVFISFFYGL 185

Query: 448 S----ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
                 S+   ++    W +DL   DP                     I P +  L +F+
Sbjct: 186 RKMSQASIAGFNSGGLLWFRDLTTYDPYY-------------------ILPTLNGLLVFL 226

Query: 504 QMKMS------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             + +         +       +    ++  F     P+ + +YW  S + + +Q  V  
Sbjct: 227 SFRENARFGTSSAASSVHMQTFMQLFCLLTPFITCHVPSSVFLYWIPSTMFTAIQALVTR 286

Query: 558 KMHGAE 563
           ++  A+
Sbjct: 287 RLDRAK 292


>gi|119498827|ref|XP_001266171.1| mitochondrial export translocase Oxa1, putative [Neosartorya
           fischeri NRRL 181]
 gi|119414335|gb|EAW24274.1| mitochondrial export translocase Oxa1, putative [Neosartorya
           fischeri NRRL 181]
          Length = 410

 Score = 82.0 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 81/239 (33%), Gaps = 38/239 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK--------LLFFPLAKKQYVSTA 387
             + +  +  +   + + +   G    A ++ T  +         L     + K      
Sbjct: 29  LDYGWGPSSIIQFFIEHIHMWGGLPWWASIVGTGLLLRLALLYPTLGAVDTSTKMLNIKP 88

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
             + ++ ++    +   Q     L+  + +L++   I       P+L QIP  F  Y+V+
Sbjct: 89  VTEPLRQQMIMRGKDGNQIEMLKLRAEIQKLHQEQGIVAWKSFIPML-QIPFGFGCYRVV 147

Query: 448 SISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
                +           W+KDL  ADP                     I P   SL M++
Sbjct: 148 KGMAALPVPGLTMESVAWLKDLTVADPYF-------------------ILPAASSLFMYL 188

Query: 504 QMKM------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            ++       +         +++  +P      ++ FP+ L +Y+  + +  + Q  ++
Sbjct: 189 SIRKGGENGVNQLQGTSLGRLLMFGLPAFSFLFMAFFPSALQLYFVTTGLFGLGQAYLL 247


>gi|13508419|ref|NP_110369.1| putative inner membrane protein translocase component YidC
           [Mycoplasma pneumoniae M129]
 gi|2496458|sp|P75112|OXAA_MYCPN RecName: Full=Membrane protein oxaA
 gi|1673823|gb|AAB95810.1| conserved hypothetical protein [Mycoplasma pneumoniae M129]
 gi|301633303|gb|ADK86857.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma pneumoniae
           FH]
          Length = 385

 Score = 82.0 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/268 (17%), Positives = 94/268 (35%), Gaps = 32/268 (11%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
                   I     + +     L  N  +++++    V+L+   +     ++   M  +Q
Sbjct: 124 PASQIVLPIMYATRVPLGSGPELGFNMILSLIVLLFLVRLITIVITLNSTLALEKMNEVQ 183

Query: 394 PKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
            K+ E+  K+K        +  Q  ++ LYK HNI   A    + + +P+F  IY+ I  
Sbjct: 184 GKLAEINAKYKGALDLQSKRNRQMEIMSLYKKHNIKSSASFVQVFVTLPIFLIIYR-IVT 242

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           +L    A       DL+    T IF+ F    +    F+ + + P+      FI  K+  
Sbjct: 243 TLRPIKAIILFNFWDLSKVPLTEIFSNFTSTGWTFIIFLII-VLPV-----QFISQKLPQ 296

Query: 508 ------SPPPADKGQA---------MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
                 +       Q           +      VF    +   AG+ +YW  + + +++Q
Sbjct: 297 IWASKRNENAKAHSQKSIEQLNKTKRMQLIFYFVFAVITAFSAAGVGVYWFLNALFTLLQ 356

Query: 553 QA----VIMKMHGAEIGLIDRLRSTFSK 576
                  I+K          +L     +
Sbjct: 357 SYLTHLFIVKRRTRRRLTYSKLEQMLER 384


>gi|325845290|ref|ZP_08168594.1| putative stage III sporulation protein J [Turicibacter sp. HGF1]
 gi|325488731|gb|EGC91136.1| putative stage III sporulation protein J [Turicibacter sp. HGF1]
          Length = 263

 Score = 81.6 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           F+      +   +  L  N G+AI+L T  V+L+  PL  K   ++A M+ IQP++  ++
Sbjct: 41  FVLPLATFITFLYNLLNQNLGLAIILATAIVRLVLMPLYLKSNKTSAIMQEIQPEMQRIQ 100

Query: 401 EKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
           +K++    Q     +Q  M+ LYK +N NP+ GC    LQ+PVF A Y+ IS     RH 
Sbjct: 101 KKYENKTDQASQVKMQTEMMDLYKKYNFNPMMGCILPFLQMPVFLAFYQAIS-----RH- 154

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPAD 513
                IKD AA++       F  +       +   I  +I++       ++   S     
Sbjct: 155 ---PLIKDAAASE-------FLGVNLGATVQLANWILALIVAGLSIYSQRLMNKSMMTNS 204

Query: 514 KGQA-----MILNWMPVVFVFALSSF----PAGLIIYWSWSNVISIVQQAVIMKMH 560
             Q      M++  M     FA+ S     P    +Y+   +V+ I+Q  ++ +  
Sbjct: 205 SAQQNKTSNMMMKVMTYYMTFAMFSITIATPFAFGLYFLTGSVMQIIQFFIVKRST 260


>gi|239941533|ref|ZP_04693470.1| hypothetical protein SrosN15_11094 [Streptomyces roseosporus NRRL
           15998]
 gi|239987998|ref|ZP_04708662.1| hypothetical protein SrosN1_11878 [Streptomyces roseosporus NRRL
           11379]
          Length = 256

 Score = 81.6 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 22/229 (9%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           M      F  +   +  L+   +    +   AI+L T  V+L   PL++           
Sbjct: 1   MSAFMSAFASLVGSLADLLQPLFQ-TASTAAAIILFTALVRLAVHPLSRAAARGQKARSR 59

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +QP+I ELR+K     P+ +QKA+++L+    ++PL+GC P LLQ+P FF +Y  +  S 
Sbjct: 60  LQPQIAELRKKH-GRNPERMQKAIMELHAAEKVSPLSGCLPSLLQMPAFFLLYH-LFSSS 117

Query: 452 EMRHAPFWGWIKD-LAAA-DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF------I 503
            +   P      D L A         L    PF   G +++G++ I+ +++ F       
Sbjct: 118 SIGGEPNALLSHDLLGAPLGGRWHDALAHGGPFGGQGLVYLGLFVIVAAVATFSYGRTKR 177

Query: 504 QMKMSPPPAD--------KGQAMILNWMPVVFVFALSS---FPAGLIIY 541
           QM  +P             G   +   MP++  F L +    P    +Y
Sbjct: 178 QMAANPMTPAAGPDGQPVPGMGAMTKLMPLLSFFTLITVAVVPLAAALY 226


>gi|225377581|ref|ZP_03754802.1| hypothetical protein ROSEINA2194_03231 [Roseburia inulinivorans DSM
           16841]
 gi|225210557|gb|EEG92911.1| hypothetical protein ROSEINA2194_03231 [Roseburia inulinivorans DSM
           16841]
          Length = 425

 Score = 81.6 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 10/134 (7%)

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---- 512
                   L  +D              +   +   + P+I  L+  + +K+ P  A    
Sbjct: 221 SHVNNFIGLNISDTPFQIIKAAFAGGSILMAVLALLIPVISYLTQVLNIKLMPTAATAGG 280

Query: 513 --DKG--QAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
             D+   Q  ++N  MP+  +    + P GL IYW  S V+  +QQ  + K H  +I L 
Sbjct: 281 DNDQMAQQMKMMNRTMPLFSLVMCFTVPVGLGIYWIASAVVRSIQQFFLNK-HFDKIDLD 339

Query: 568 DRLRSTFSKNYNSQ 581
           D +     K    +
Sbjct: 340 DIIAKNQEKAKKKR 353



 Score = 53.5 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 60/113 (53%), Gaps = 6/113 (5%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           +I   M++LM      + N G++I+L T+ +  L FPL  KQ   +   + + P++  ++
Sbjct: 20  WIMNGMYILMEKVG--ITNVGLSIILFTIVIYALMFPLTYKQQKFSKLSQKMNPELQAVQ 77

Query: 401 EKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           +K+K        Q +Q    Q+Y+ + ++P   C  +L+Q+P+  A+Y+V   
Sbjct: 78  KKYKDKKDTVSMQNMQTETQQIYEKYGVSPTGSCVQMLIQMPLLLALYRVFMN 130


>gi|224001854|ref|XP_002290599.1| cytochrome oxidase-like protein [Thalassiosira pseudonana CCMP1335]
 gi|220974021|gb|EED92351.1| cytochrome oxidase-like protein [Thalassiosira pseudonana CCMP1335]
          Length = 231

 Score = 81.6 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 100/238 (42%), Gaps = 37/238 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           +   ++ +  + +L+++ +++      + + I +TT+  +LL FP+      +++ M ++
Sbjct: 1   FEPTWWPSDQLLLLLNHVHDVYLPAYPYAVTIGVTTLAARLLLFPIYAAGQRNSSRMAHM 60

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           QP++ ++ +   + P Q  Q+ ++     L++ ++ NP+ G    L   P F  ++  + 
Sbjct: 61  QPEMKKIMDATPKQPDQATQQKVMAQTRALWRKYDCNPMKGLVVPLASFPFFMGMFFGLK 120

Query: 449 ISLE----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
            + +    +       W  DL  ADP                   + I P++ + +  + 
Sbjct: 121 KAPDYFPDLLSNGGLFWFTDLTQADP-------------------LMILPVLSAGTFLVM 161

Query: 505 MKMS---PPPADK----GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
            +++      +D          +  + +V V   + F + ++ YW  +N  ++ Q   
Sbjct: 162 TELTKDQMMSSDPVRGRNMVNAMRALAIVMVPLTAYFNSAVLCYWVTNNSFTMGQSLF 219


>gi|50557420|ref|XP_506118.1| YALI0F32021p [Yarrowia lipolytica]
 gi|49651988|emb|CAG78932.1| YALI0F32021p [Yarrowia lipolytica]
          Length = 388

 Score = 81.6 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 87/229 (37%), Gaps = 34/229 (14%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           W  + +     L+ + +   G    A I  TTV V++L FPL  +       M  ++P++
Sbjct: 100 WSLWPSDIYLNLLEHVHVYTGLPWWAAIASTTVIVRVLLFPLFVQAANEQGKMSEVKPEL 159

Query: 397 DELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           + + EK K     +  Q++     ++ K + I+ +   +  +   P+   I+  I    E
Sbjct: 160 NVIDEKLKSAANMTEMQMVAHEKKKILKKYGISQMK-LFYPMAMFPLTIGIFLGIRRMCE 218

Query: 453 MRH-----APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +            W ++LAA DP                        +I +      +++
Sbjct: 219 IGGVQGLSTEGVLWFQNLAAPDPYLG-------------------LQVITAAMYMASIRL 259

Query: 508 SPPPA----DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
                      G   IL W P + V  L   PA L++++  + ++ ++Q
Sbjct: 260 GSETGTNNLSPGMKKILQWAPWISVPFLMKMPAALLLHFFVNGILMLIQ 308


>gi|227873164|ref|ZP_03991455.1| inner membrane insertion protein [Oribacterium sinus F0268]
 gi|227840995|gb|EEJ51334.1| inner membrane insertion protein [Oribacterium sinus F0268]
          Length = 442

 Score = 81.6 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 15/121 (12%)

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMF----IQMKMSPPPA----DKGQAMI--LN-W 522
             L      Y        + PI+  LS +    +  K + P A    D+ Q M+  +N  
Sbjct: 247 LNLSTAPSAYGFTPNIYWLIPILAGLSQWASTLLMQKQTMPTATEEGDQSQQMMKSMNVM 306

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL----IDRLRSTFSKNY 578
           MP++ V+   SF +G+ +YW  S+V  ++QQ ++    G +           ++   +  
Sbjct: 307 MPLMSVWFCFSFASGIGLYWIASSVFMLLQQLILNWYFGKKTNEELLQDAMAKANEKRAK 366

Query: 579 N 579
            
Sbjct: 367 K 367



 Score = 55.4 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 4/139 (2%)

Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374
              I   +    +P F  + +           ++ +      + N G+AI+L T+  ++L
Sbjct: 3   QNLIILTKNTSNLPLFGPIWNLIVSALGWIMNWIYLFLDGIGIPNIGLAIILFTLVTRIL 62

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGC 430
            FP + KQ  S+  M+ +QP+I  ++EK+K           Q  M  +Y+ +  +  AGC
Sbjct: 63  LFPTSLKQQKSSRMMQIMQPEIRAVQEKYKNKTDNASMMAQQTEMKAIYEKYGTSMTAGC 122

Query: 431 WPILLQIPVFFAIYKVISI 449
            P+ LQ+P+ FA+Y++I  
Sbjct: 123 LPLFLQMPIIFALYRIIMN 141


>gi|325685786|gb|EGD27859.1| membrane protein OxaA 2 [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 320

 Score = 81.6 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 93/268 (34%), Gaps = 39/268 (14%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYV 384
                G +Y+I + + + + +    + +        G AI++ T+ V+++  PL   Q  
Sbjct: 35  KAPTSGPYYWIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLVVRVILMPLMLSQQH 94

Query: 385 STANMKNIQPKIDELREK---------FKQSPPQVLQKAMIQLYKTHNINPL--AGCWPI 433
                +     +    +                  L     ++Y  +N++     GC P+
Sbjct: 95  KATLQQEKMHLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPL 154

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+P+   IY+ ++ S  +  + F+G                   +       +   I 
Sbjct: 155 LIQMPIMIGIYQAVAYSNALAKSTFFG-------------------ISLSSKSMVLAIIA 195

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            +   +  ++ M   P    K     +   P++  F   SF   L +YW+  N++ ++QQ
Sbjct: 196 TVFALIQSYVAMIGIPEEQKKTMQATMLMNPIMTFFFSMSFSGALALYWAVGNLVMVIQQ 255

Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            +       +     R+      +   +
Sbjct: 256 LITT--FIVQPRAKKRVSKELEDSPIVE 281


>gi|330719323|ref|ZP_08313923.1| preprotein translocase subunit YidC [Leuconostoc fallax KCTC 3537]
          Length = 313

 Score = 81.2 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/282 (16%), Positives = 98/282 (34%), Gaps = 35/282 (12%)

Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTV 369
           K   TI     D+ +           + +I  P+  +M+   N V      G AI++ T 
Sbjct: 5   KRVLTIIFVIFDIILITGGYDQHSRMYRWIGHPLADIMTSIANFVGGTNGIGWAIIIITA 64

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKT 421
            ++L+  P    Q  ++   +    ++           R+   Q   Q    AM+ LY+ 
Sbjct: 65  VLRLILLPFFLNQQKASTINQIKMQQLKPEIDKLQAITRKAGTQQEQQQASMAMMSLYRE 124

Query: 422 HNINPLAG--CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           +N++   G     + +Q+PVF  +Y  I  S  +R A F+G+                  
Sbjct: 125 NNVSLTGGISFLTMAMQVPVFSGLYSAILHSPSLRDATFFGF------------------ 166

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539
                   +   I  +I     ++  K  P    K  + ++   P++           + 
Sbjct: 167 -NLNQSQIVFSVIAGLIYLAQAWLMAKHLPEEQRKASSAMMYISPIMIFAFSMYASGAIG 225

Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +Y+    +  + Q A+    H     + +++   F     ++
Sbjct: 226 LYFIVGGIFLLFQSAI---NHLQRPAMEEKVSKEFKVEKTAE 264


>gi|300813188|ref|ZP_07093562.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
 gi|300495846|gb|EFK30994.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
          Length = 320

 Score = 81.2 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 94/268 (35%), Gaps = 39/268 (14%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYV 384
                G +Y+I + + + + +    + +        G AI++ T+ V+++  PL   Q  
Sbjct: 35  KAPTSGPYYWIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLGVRVILMPLMLSQQH 94

Query: 385 STANMKNIQPKIDELREK---------FKQSPPQVLQKAMIQLYKTHNINPL--AGCWPI 433
                +     +    +                  L     ++Y  +N++     GC P+
Sbjct: 95  KATLQQEKMHLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPL 154

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+P+   IY+ ++ S  +  + F+G                   +       +   I 
Sbjct: 155 LIQMPIMIGIYQAVAYSNALAKSTFFG-------------------ISLSSKSMVLAIIA 195

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            +   +  ++ M   P    K     +   P++  F   SF   L +YW+  N++ ++QQ
Sbjct: 196 TVFALIQSYVAMIGIPEEQKKTMQATMLMNPIMTFFFSMSFSGALALYWAVGNLVMVIQQ 255

Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            +       +     R+    + +   +
Sbjct: 256 LITT--FIVQPRAKKRVSKELADSPIVE 281


>gi|227549433|ref|ZP_03979482.1| inner membrane protein translocase component YidC [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227078510|gb|EEI16473.1| inner membrane protein translocase component YidC [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 325

 Score = 81.2 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 116/308 (37%), Gaps = 65/308 (21%)

Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++ +++ +            + +AI+  T  +++L       Q  S   
Sbjct: 1   MLNFIYWPISAVLWFWHKIFGFIFAPDSGIAWILAIVFLTFTIRVLLVKPMVNQMRSMRR 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QPK+ E+R K+K    Q + +   +LYK    NPLA C   L+Q+PVF  ++ V+ 
Sbjct: 61  MQEMQPKMQEIRAKYKG-DQQKMAQETQKLYKEMGTNPLASCIVPLVQMPVFIGLFHVLR 119

Query: 449 I-------------SLEM-RHAPFWGWIKD--------------LAAA--DPTNIFTLFG 478
                         S+E  R+   + +  +              L+A    P + F+ F 
Sbjct: 120 SFNRTGTGPGQLGMSVEQNRNTANYIFSPEDVRSFLDADFFGVPLSAYMSMPADAFSAFT 179

Query: 479 ILPFYLPGFMHVGI-WPIIMSLSMFIQMKMSPPPADKGQAM------------------- 518
            L F     + V +   I+ ++   +  ++S    ++ +A                    
Sbjct: 180 GLDFTRVDIILVCMPLVILSAVFTHLNARLSIERQNERRAAGKVAAPVGDQAEMMQQQMQ 239

Query: 519 -----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
                +L   P++ + +   +  GL+ Y   +NV +  Q  ++      E  + +  +  
Sbjct: 240 IMNKMMLWVFPIMILASGFLWHVGLLFYMLANNVWTFFQTRIVFDKMDKEEAMEEEQKRE 299

Query: 574 FSKNYNSQ 581
             +    Q
Sbjct: 300 AKRATAPQ 307


>gi|329726436|gb|EGG62899.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus
           epidermidis VCU144]
          Length = 278

 Score = 81.2 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 42/244 (17%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----IQPKIDELREKFKQSPPQVL 411
              N+G AI+   + V+ +  P    Q  +   M+     +QP++D +R+K K +  Q  
Sbjct: 50  FQDNYGFAIISIVLIVRFILLPFMLIQVKNMHMMREKTKVVQPELDAIRDKMKHATSQKE 109

Query: 412 QKAMIQL----YKTHNINP---LAGCWPILLQIPVFFAIYKVI--SISLEMRHAPFWGWI 462
           + A  QL    Y+++ INP   + GC P+L+Q+P+   +Y  +    S  +   P + W 
Sbjct: 110 RNAANQLLLKKYQSYGINPLKNMLGCLPVLIQMPILMGLYMSLKYPSSHGITEYPHFLWF 169

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM---- 518
            DL   D                      I  II ++  F+Q  ++     K Q      
Sbjct: 170 -DLTQPD---------------------LIMTIIAAIMYFVQPLVNSIHYPKDQRKTYYF 207

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID--RLRSTFSK 576
           ++ + P+   +A     A L +YWS S    IVQ       H  ++ L +  +L+    +
Sbjct: 208 MMVFSPIFITYASLHSAAALGLYWSISAAFLIVQMHF-AHSHYKKVALHEAKKLKQKLEQ 266

Query: 577 NYNS 580
           N ++
Sbjct: 267 NKDN 270


>gi|226326142|ref|ZP_03801660.1| hypothetical protein COPCOM_03961 [Coprococcus comes ATCC 27758]
 gi|225205684|gb|EEG88038.1| hypothetical protein COPCOM_03961 [Coprococcus comes ATCC 27758]
          Length = 423

 Score = 81.2 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 12/115 (10%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-------PADKGQAMILNWM----PVV 526
           G+        +   + P++  LS ++ +K+S         P     A  +  M    P+V
Sbjct: 241 GVKAGAWGIVIMAVLIPVLSGLSQYLSVKLSQQTTAVTNNPQADQMASTMKTMNVTLPLV 300

Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            VF   + P GL IYW  S V+ +VQQ  I K H  +I + + ++    K    +
Sbjct: 301 SVFMCFTLPTGLGIYWVASAVVRMVQQFFINK-HLNKIPMDELIKENMEKAAEKR 354



 Score = 54.2 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           + N G+ I+L T+ +  L  PL  KQ   +     + P++ ++++K+K    Q   + M 
Sbjct: 37  IHNLGVCIILLTIVIYTLLMPLTIKQQKFSKMSAAMNPELQKVQQKYKGKNDQASMQKMQ 96

Query: 417 Q----LYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           +    +Y+ + ++P  GC  + +Q P+ +A+Y VI  
Sbjct: 97  EETQLVYEKYGVSPTGGCLSMFIQFPILWAMYYVIRN 133


>gi|260437685|ref|ZP_05791501.1| inner membrane protein OxaA [Butyrivibrio crossotus DSM 2876]
 gi|292809911|gb|EFF69116.1| inner membrane protein OxaA [Butyrivibrio crossotus DSM 2876]
          Length = 415

 Score = 81.2 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 64/333 (19%), Positives = 117/333 (35%), Gaps = 84/333 (25%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNL------VGNFGIAIMLTTVFVKLLFFPLAKKQ 382
            F   I W           ++ +           V   GI+++L T+ V+L+  P+  KQ
Sbjct: 9   GFLKPIAWLLGQIFNGLFNLIYNIAEWFTDKPYHVPIIGISVILFTIIVRLILLPMTIKQ 68

Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIP 438
              +     + P++ E++ K+K    Q     +Q     +Y+ +  +P  GC  +L+Q+P
Sbjct: 69  QKFSKLSGLMNPELQEIQAKYKDKRDQVSMMNMQAETKAVYEKYGTSPTGGCLTMLIQLP 128

Query: 439 VFFAIYKV--------------------------------------ISISLEMRHAPFWG 460
           + FA+Y+V                                      IS+S     A    
Sbjct: 129 IMFALYRVIYKIPGYVTKIRELCGGIADKITGSGDDWATKLDAINGISVSASTGKATLID 188

Query: 461 WIKDLA------------------AADPTN-IFTLFGILPFYLPGF--MHVGIWPIIMSL 499
            I +L+                  A D  +    LFGI     PG+      I PI+  L
Sbjct: 189 KIYNLSPEKWSEVQNAFSSVDFGNAYDQIHGYNNLFGISLTQAPGWRLSWALIIPILAGL 248

Query: 500 SMFIQMKMS-------------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWS 545
           + ++ +K+                        ++   MP++      SF + + +YW  S
Sbjct: 249 TQWLSVKLMENKNNVNVGSQNDQQAGMASSMKVMNTIMPILSAVFCVSFASCIGLYWIAS 308

Query: 546 NVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
           +V+ IV Q VI K    +  + + ++    K  
Sbjct: 309 SVVQIVVQLVINKKMNNK-DVDEIVKENIEKAN 340


>gi|42519505|ref|NP_965435.1| hypothetical protein LJ1629 [Lactobacillus johnsonii NCC 533]
 gi|41583793|gb|AAS09401.1| hypothetical protein LJ_1629 [Lactobacillus johnsonii NCC 533]
          Length = 327

 Score = 81.2 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 99/258 (38%), Gaps = 32/258 (12%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
               +  F    + + + + +        G AI++ T  V+L+  PL           + 
Sbjct: 40  YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99

Query: 392 ----IQPKIDELREKFKQS-----PPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
               +QP++  ++E  K+          + +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 100 KTQKLQPQMRLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S E+  + F+G                   +       +   I  ++  + 
Sbjct: 160 MGIYQAVAYSKELAASSFFG-------------------ISLGQRSIILTIIATLLYVVQ 200

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            ++ M   P    K   M L   P +  F   S P  L +Y+    +I+I+QQ +     
Sbjct: 201 GYLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLITT--F 258

Query: 561 GAEIGLIDRLRSTFSKNY 578
                +   + +  S+  
Sbjct: 259 VIMPKVKRDVAAELSERP 276


>gi|222624078|gb|EEE58210.1| hypothetical protein OsJ_09169 [Oryza sativa Japonica Group]
          Length = 407

 Score = 81.2 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 87/267 (32%), Gaps = 54/267 (20%)

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            P          F  +A    ++         N+   I LT++ ++ L  PL   Q  +T
Sbjct: 91  FPGEVAAAAADSFAPVAALQHLIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQMKAT 150

Query: 387 ANMKNIQPKIDELR------------------EKFKQSPPQVLQKAMI--------QLYK 420
             +  ++P+I+ +                    +             +        +L+ 
Sbjct: 151 VKLNAMRPEIEAINLEMRTISSTRIAGNEKSSTRVTDEGSMSTDPQSMLEGKRKLGELFL 210

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLE---MRHAPFWGWIKDLAAADPTNIFTLF 477
            H + PL     + +Q P+F + +  IS  +E           W  DL   D        
Sbjct: 211 RHGVTPLTPLKGLFIQAPIFMSFFFAISNMVEKVPSFKGGGIYWFTDLTTPD-------- 262

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP------PADKGQAMILNWMPVVFVFAL 531
                       + I P++ SL+  + ++++        P  K        M V+ +   
Sbjct: 263 -----------ELLILPMLTSLTFLVTVELNMQDGMEGNPMLKTMKNFSRVMAVLTIPFT 311

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558
            SFP  +  YW  SN+ S+    V+ K
Sbjct: 312 MSFPKAIFFYWVTSNLFSLGYGFVLRK 338


>gi|55726011|emb|CAH89782.1| hypothetical protein [Pongo abelii]
          Length = 459

 Score = 81.2 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 83/251 (33%), Gaps = 56/251 (22%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            Y     +  L+ + + +L   +  AI   TVF + L FPL        A + +  P+I 
Sbjct: 122 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHSHLPEIQ 181

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++          +         K H I         + Q P+F + +  +   
Sbjct: 182 KFSSRIREAKLAGDHIEYYKASSEMAFYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 241

Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +           W +DL  +DP                   + I P+ ++ +M+  ++
Sbjct: 242 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 282

Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFP--------------------AGLIIY 541
           +      +         ++  MP++ +      P                    +G  +Y
Sbjct: 283 LGAETGVQSSDLQWMRNVIRVMPLITLPITMHSPRQCLCTGSPPICFPWSKYPVSGFQMY 342

Query: 542 WSWSNVISIVQ 552
           W  SN+ S+VQ
Sbjct: 343 WLSSNLFSLVQ 353


>gi|229816221|ref|ZP_04446531.1| hypothetical protein COLINT_03271 [Collinsella intestinalis DSM
           13280]
 gi|229808229|gb|EEP44021.1| hypothetical protein COLINT_03271 [Collinsella intestinalis DSM
           13280]
          Length = 279

 Score = 81.2 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 111/246 (45%), Gaps = 10/246 (4%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
            +     + +I + +F  +       G++G++I++  V ++LL  P+  K   STA M+ 
Sbjct: 15  KVRIIRMWDWIVQILFQALELIQRFAGDWGLSIIILVVIIRLLLTPMMLKSIKSTARMQV 74

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-- 449
           +QPK+ E++E++  + PQ   + + + Y  +  NP  GC P+L+Q+P+  A++ ++    
Sbjct: 75  LQPKLLEIQERYA-ADPQRQAEELQKFYSENKFNPFGGCLPLLIQMPILVALFNLLRDLG 133

Query: 450 ----SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
                   +   F+  + +L  +        FG    YL   +  G+   I    M++  
Sbjct: 134 HYFPDAAEKGFSFFNILPNLVTSPAQAFADGFGAALPYLIALILFGVLTFI--PQMYMTR 191

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             +         M++  M V+ +      PAG+++Y+  S+   +VQQ  + +    +  
Sbjct: 192 NQTGAQVQST-KMMMVVMTVMMLVMGWGMPAGVLLYYDVSSAWQVVQQIFVTQKVIDKAK 250

Query: 566 LIDRLR 571
             +  R
Sbjct: 251 AEEEAR 256


>gi|58268112|ref|XP_571212.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57227446|gb|AAW43905.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 462

 Score = 81.2 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 51/291 (17%), Positives = 94/291 (32%), Gaps = 32/291 (10%)

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMF 347
            +     G        L +G      ++  E   A  +   L   G+ +           
Sbjct: 73  PQPPADAGAPTLEDLILHSGKSVQDVLNSEEAVHAAMKLSDLKLIGYDHGILSVTGWFTD 132

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS-------TANMKNIQPKIDELR 400
            L++    L   +  AI  TTV ++L    L                 ++ +  +     
Sbjct: 133 GLVALHTELGLPWWAAIAGTTVLIRLCLTRLVVNTQKHSVRLAAVNPQIQELMAEAKVAS 192

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHA 456
                    ++ + +  L K HN+NPL      L+Q+P+F   + ++     +       
Sbjct: 193 ANKDTHMQTLISQRLRDLMKEHNVNPLRPLLLPLVQMPIFLTFFSIVRGLANLPLPQLKE 252

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG- 515
              GW+ DL AADP  I     +L   L         P             SP       
Sbjct: 253 GGLGWVTDLTAADPYYILPATSLLFTNLVFKFGADGVPTAAKAG-------SPMTTAHMR 305

Query: 516 ---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
              Q       P++       FP+ L+ YW++S   +++Q  +I++    +
Sbjct: 306 NFIQLTTFLSFPLIM-----YFPSALLFYWTFSTGFTLLQS-IILRQPIVK 350


>gi|134112063|ref|XP_775567.1| hypothetical protein CNBE2810 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258226|gb|EAL20920.1| hypothetical protein CNBE2810 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 463

 Score = 81.2 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 51/291 (17%), Positives = 94/291 (32%), Gaps = 32/291 (10%)

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMF 347
            +     G        L +G      ++  E   A  +   L   G+ +           
Sbjct: 74  PQPPADAGAPTLEDLILHSGKSVQDVLNSEEAVHAAMKLSDLKLIGYDHGILSVTGWFTD 133

Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS-------TANMKNIQPKIDELR 400
            L++    L   +  AI  TTV ++L    L                 ++ +  +     
Sbjct: 134 GLVALHTELGLPWWAAIAGTTVLIRLCLTRLVVNTQKHSVRLAAVNPQIQELMAEAKVAS 193

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHA 456
                    ++ + +  L K HN+NPL      L+Q+P+F   + ++     +       
Sbjct: 194 ANKDTHMQTLISQRLRDLMKEHNVNPLRPLLLPLVQMPIFLTFFSIVRGLANLPLPQLKE 253

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG- 515
              GW+ DL AADP  I     +L   L         P             SP       
Sbjct: 254 GGLGWVTDLTAADPYYILPATSLLFTNLVFKFGADGVPTAAKAG-------SPMTTAHMR 306

Query: 516 ---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
              Q       P++       FP+ L+ YW++S   +++Q  +I++    +
Sbjct: 307 NFIQLTTFLSFPLIM-----YFPSALLFYWTFSTGFTLLQS-IILRQPIVK 351


>gi|330723621|gb|AEC45991.1| putative inner membrane protein translocase component YidC
           [Mycoplasma hyorhinis MCLD]
          Length = 612

 Score = 80.8 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 64/483 (13%), Positives = 136/483 (28%), Gaps = 31/483 (6%)

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           + SN    Y + + + +  N  E    +     +           K  + +      +  
Sbjct: 125 NTSNNYGQYSSLIMFHNADNTFEYAKGDKTHEFLFLNSAESKYDPKFNWTDIKLPSPKFF 184

Query: 172 ISLDEHY--LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
             + + Y   F+      N  +            +  P         ++    +      
Sbjct: 185 ALVGDKYAEEFQKTQLAVNPILQNQGNFFYTVSNQADPTNEKYFNFSRDIIQYLYNKTMN 244

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
           +E   + +  S        N       K          +       +  S          
Sbjct: 245 IEGFKTKLIPSINVLESYKNEADFEKIKKELQASNDPVKKEALQVLQDYSTLAKTVLIPT 304

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
              +I  +        N        +  I         P       W    F +  +F L
Sbjct: 305 RFTQIDPVNNTYSFAYNLNDNDYYNYEGIAFRSDYPNNPIVTWSDSWKLGPFYSLIVFPL 364

Query: 350 MSY----------FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
                        +         AI++  +  K++ F    K     +    +Q K  ++
Sbjct: 365 SKIILGVSESQSIWELNGWTTIFAIIVVVLLTKIISFIFRFKTIFGQSKQIEMQAKKAKI 424

Query: 400 REKFKQSP-----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
             K++         Q  ++ +  LYK +N +P A    +L+ +P+F A+++VI     ++
Sbjct: 425 DAKYEPYKKNKMMQQRHRQEVADLYKKNNFSPFAPFSQVLVTMPIFIAVWRVIQGIPSLK 484

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-------M 507
              + G    L  A  +      G+  +     + V +  +   L  ++  K        
Sbjct: 485 VTYWVG----LELASISYQKLFEGLWQYLPILIIVVLVQAVQQLLPKYLNKKNTNRIMNQ 540

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA---VIMKMHGAEI 564
           +     K Q      + +VF+F    F A L IYW    +  I Q      + +    + 
Sbjct: 541 NESETMKKQQKTQRIISIVFIFFGVLFQASLQIYWIIGGLWEIGQTLGVHYLQRSTFFKE 600

Query: 565 GLI 567
            + 
Sbjct: 601 KMR 603


>gi|329667744|gb|AEB93692.1| putative membrane protein [Lactobacillus johnsonii DPC 6026]
          Length = 327

 Score = 80.8 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 94/258 (36%), Gaps = 32/258 (12%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
               +  F    + + + + +        G AI++ T  V+L+  PL           + 
Sbjct: 40  YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99

Query: 392 IQPKIDELREKFKQ---------SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
              K+    +  ++              + +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S E+  + F+G                   +       +   I  ++  + 
Sbjct: 160 MGIYQAVAYSKELAASSFFG-------------------ISLGQRSIILTIIATLLYVVQ 200

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            ++ M   P    K   M L   P +  F   S P  L +Y+    +I+I+QQ +     
Sbjct: 201 GYLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLITT--F 258

Query: 561 GAEIGLIDRLRSTFSKNY 578
                +   + +  ++  
Sbjct: 259 VIMPKVKRDVAAELNERP 276


>gi|227485753|ref|ZP_03916069.1| inner membrane insertion protein [Anaerococcus lactolyticus ATCC
           51172]
 gi|227236308|gb|EEI86323.1| inner membrane insertion protein [Anaerococcus lactolyticus ATCC
           51172]
          Length = 236

 Score = 80.8 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 54/207 (26%), Positives = 101/207 (48%), Gaps = 25/207 (12%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           + IAI++ T+ V L+  P+           ++ +PK+DE+++K+     QVLQK M +LY
Sbjct: 33  YAIAIIIMTLLVSLISIPVTISTQKQAEKTRSFKPKMDEIQKKY-GYDQQVLQKKMQELY 91

Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISIS------LEMRH-APFWGWIKDLAAADPT 471
           K   + P L+GC P+++Q+ V F +++++  +        + H    + W+ DL  ADP 
Sbjct: 92  KQEGVTPGLSGCLPMIIQLLVLFGLFEMMRNTGKYVFPEGLNHIRTDFYWVPDLLKADPL 151

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWMPVVFVF 529
                FG+        +   ++ I          K +P       +M  ++  +P+VF F
Sbjct: 152 ----WFGLPLLTSLSQLLTTLFSI----------KTNPQQQQAMGSMNTMMLVLPLVFFF 197

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556
                PAGL +Y++ S+V  ++   V+
Sbjct: 198 TFRQLPAGLPLYYTLSSVFRLLIMVVM 224


>gi|227500990|ref|ZP_03931039.1| sporulation associated-membrane protein [Anaerococcus tetradius
           ATCC 35098]
 gi|227216763|gb|EEI82161.1| sporulation associated-membrane protein [Anaerococcus tetradius
           ATCC 35098]
          Length = 244

 Score = 80.8 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 36/227 (15%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           + IAI++ T+ V LL  P+   Q       K  +PK++E+++K+     Q++QK M QLY
Sbjct: 33  YAIAIIIMTLLVSLLIIPMTVSQQKQAERTKIFKPKMEEIQKKYS-YDQQIMQKKMQQLY 91

Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISISLEM-------RHAPFWGWIKDLAAADPT 471
           K   + P ++GC  +++QI + F +++++  + +             + WI +L   DP 
Sbjct: 92  KEEGVTPGISGCLVMIIQIMILFGLFRMMGDTTKYVFPEGLDNVRTNFYWISNLLDKDPY 151

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--------MILNWM 523
                                 P++ SLS       S     + Q          +   M
Sbjct: 152 WF------------------ALPLLTSLSQVAVQLFSMKTNPQMQQGGAMGNMNNMFLIM 193

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA-EIGLIDR 569
           P+++ F     PAGL +Y++ S+V  +V   ++     A +  L D 
Sbjct: 194 PLMYFFIFRGLPAGLPLYYTLSSVFRLVIMVIMHFYMKANKTELEDE 240


>gi|304373458|ref|YP_003856667.1| Membrane protein oxaA [Mycoplasma hyorhinis HUB-1]
 gi|304309649|gb|ADM22129.1| Membrane protein oxaA [Mycoplasma hyorhinis HUB-1]
          Length = 612

 Score = 80.8 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 68/486 (13%), Positives = 146/486 (30%), Gaps = 37/486 (7%)

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
           + SN    Y + + + +  N  E    +     +           K  + +      +  
Sbjct: 125 NTSNNYGQYSSLIMFHNADNTFEYAKGDKTHEFLFLNSAESKYDPKFNWTDIKLPSPKFF 184

Query: 172 ISLDEHY--LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
             + + Y   F+      N  +     +   ++      T    F      I  L +K++
Sbjct: 185 ALVGDKYAEEFQKTQLAVNPILQNQG-NFFYKVSNQADPTNEKYFNFSRDIIQYLYNKTM 243

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISD--KYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
             + +      SI+      +        K   +   P K+ +      Y +        
Sbjct: 244 NIEGFKTKLIPSINVLESYKNEADFEKIKKELQASNDPVKKEALQVLQDYSTLAKTVLIP 303

Query: 288 KFSANEITILPGKSITTTNFLF-AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
             +          + +    L       +  I         P       W    F +  +
Sbjct: 304 --TRFTQIDPVNNTYSFAYNLNDNDYYNYEGIAFRSDYPNNPIVTWSDSWKLGPFYSLIV 361

Query: 347 FMLMSY----------FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           F L             +         AI++  +  K++ F    K     +    +Q K 
Sbjct: 362 FPLSKIILGVSESQSIWELNGWTTIFAIIVVVLLTKIISFIFRFKTIFGQSKQIEMQAKK 421

Query: 397 DELREKFKQSP-----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
            ++  K++         Q  ++ +  LYK +N +P A    +L+ +P+F A+++VI    
Sbjct: 422 AKIDAKYEPYKKNKMMQQRHRQEVADLYKKNNFSPFAPFSQVLVTMPIFIAVWRVIQGIP 481

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK----- 506
            ++   + G    L  A  +      G+  +     + V +  +   L  ++  K     
Sbjct: 482 SLKVTYWVG----LELASISYQKLFEGLWQYLPILIIVVLVQAVQQLLPKYLNKKNTNRI 537

Query: 507 --MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA---VIMKMHG 561
              +     K Q      + +VF+F    F A L IYW    +  I Q      + +   
Sbjct: 538 MNQNESETMKKQQKTQRIISIVFIFFGVLFQASLQIYWIIGGLWEIGQTLGVHYLQRSTL 597

Query: 562 AEIGLI 567
            +  + 
Sbjct: 598 FKEKMR 603


>gi|293363973|ref|ZP_06610709.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma
           alligatoris A21JP2]
 gi|292552463|gb|EFF41237.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma
           alligatoris A21JP2]
          Length = 610

 Score = 80.8 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 102/272 (37%), Gaps = 35/272 (12%)

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
           + L   + E   I  + +   +  F  LI +   Y          +          I ++
Sbjct: 336 SKLAYSSVEQKPITSWGESWGLGPFYGLIVYPISYVSQHLRQAFPAMAGWETIFVIIIVV 395

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV--LQKAMIQLYKTHN 423
           +      L+    +        +++  + +I+   + F  +       Q+ + +LYK HN
Sbjct: 396 IVIKTFSLIVTFKSIVGQSIQEDLRGKKAQIEAKYKDFANNKMMKARKQQELQKLYKKHN 455

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           INPL     I++ +PVFFA+++VI    E++   + G             F+       +
Sbjct: 456 INPLDQFLSIIISMPVFFAMWRVIQCMPEIKSTVWLG-----------LNFSSTSYQSLF 504

Query: 484 LPGFMHVGIWPIIMSL---SMFIQMKMSP---------------PPADKGQAMILNWMPV 525
              + ++GI  + + +   S  +   ++                  ++K Q +I+    +
Sbjct: 505 AGQWQYLGIIIVALGVQLASQLLPRLLNKKRLKERISIAENDALKKSEKTQKIIM----L 560

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           VF+     F AG+ +YW  + + ++ Q   I 
Sbjct: 561 VFLVITVIFTAGVQVYWIITGLWTVGQTIGIY 592


>gi|319400148|gb|EFV88383.1| 60Kd inner membrane family protein [Staphylococcus epidermidis
           FRI909]
          Length = 278

 Score = 80.8 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 88/243 (36%), Gaps = 40/243 (16%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           E      ++    K M   + +       N+G AI+   + V+ +  P    Q  +   M
Sbjct: 24  EENQTGIFYNVFVKSMDEFLHFLGKVFQDNYGFAIISIVLIVRFILLPFMLIQVKNMHMM 83

Query: 390 KNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIP 438
           +     +          ++    Q       + +++ Y+++ INP   + GC P+L+Q+P
Sbjct: 84  REKTKVVQPELDAIRDKIKHATSQEERNAANQLLLKKYQSYGINPLKNMLGCLPVLIQMP 143

Query: 439 VFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           +   +Y  +    S  +   P + W  DL   D                      I  II
Sbjct: 144 ILMGLYMSLKYPSSHGITEYPHFLWF-DLTQPD---------------------LIMTII 181

Query: 497 MSLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            ++  F+Q  ++     K Q      ++ + P+   +A     A L +YWS S    IVQ
Sbjct: 182 AAIMYFVQPLVNSIHYPKDQRKTYYFMMVFSPIFITYASLHSAAALGLYWSISAAFLIVQ 241

Query: 553 QAV 555
              
Sbjct: 242 MHF 244


>gi|242243775|ref|ZP_04798219.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           epidermidis W23144]
 gi|242232778|gb|EES35090.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           epidermidis W23144]
          Length = 278

 Score = 80.8 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 100/270 (37%), Gaps = 43/270 (15%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           E      ++    K M   + +       N+G AI+   + V+ +  P    Q  +   M
Sbjct: 24  EENQTGIFYNVFVKSMDEFLHFLGRVFQDNYGFAIISIVLIVRFILLPFMLIQVKNMHMM 83

Query: 390 KNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIP 438
           +     +          ++    Q       + +++ Y+++ INP   + GC P+L+Q+P
Sbjct: 84  REKTKVVQPELDAIRDKMKHATSQEERNAANQLLLKKYQSYGINPLKNMLGCLPVLIQMP 143

Query: 439 VFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           +   +Y  +    S  +   P + W  DL   D                      I  II
Sbjct: 144 ILMGLYMSLKYPSSHGITEYPHFLWF-DLTQPD---------------------LIMTII 181

Query: 497 MSLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            ++  F+Q  ++     K Q      ++ + P+   +A     A L +YWS S    IVQ
Sbjct: 182 AAIMYFVQPLVNSIHYPKDQRKTYYFMMVFSPIFITYASLHSAAALGLYWSISAAFLIVQ 241

Query: 553 QAVIMKMHGAEIGLID--RLRSTFSKNYNS 580
                  H  ++ L +  +L+  F  + ++
Sbjct: 242 MHF-AHSHYKKVALHEAKKLKQKFEHHKDN 270


>gi|238854473|ref|ZP_04644812.1| preprotein translocase subunit YidC [Lactobacillus jensenii 269-3]
 gi|260665479|ref|ZP_05866326.1| preprotein translocase subunit YidC [Lactobacillus jensenii
           SJ-7A-US]
 gi|238832900|gb|EEQ25198.1| preprotein translocase subunit YidC [Lactobacillus jensenii 269-3]
 gi|260560747|gb|EEX26724.1| preprotein translocase subunit YidC [Lactobacillus jensenii
           SJ-7A-US]
          Length = 322

 Score = 80.8 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 97/254 (38%), Gaps = 32/254 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK----- 390
           + +     + + +            G AI + T  ++ +  PL       +   +     
Sbjct: 44  YQFIGIPIRNIMLATENAIGGSNGAGWAIAIITAVIRFVLLPLMLSTSKKSTIQQEKVSR 103

Query: 391 ---NIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIY 444
                +   D L+++      Q+   +   ++Y+ +N++     GC P+L+Q P    IY
Sbjct: 104 LQDQFKLIQDALKDRSLTPDKQMQISQLQQKVYRENNLSITGGIGCLPLLVQFPFMIGIY 163

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           + ++ S  +  + F+G    ++   P+ +F + G L +     + +        +S   Q
Sbjct: 164 QAVAYSDALYKSNFFG----VSLGKPSLLFAIVGALFYLAQSLLMLR------GVS--EQ 211

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +         Q+ +    P++ +F   S P  L +Y+    +I+++QQ ++   +    
Sbjct: 212 QR------AAMQSTVF-ISPLMTLFISMSTPGALGLYFLVGGIIALIQQVIVT--YIILP 262

Query: 565 GLIDRLRSTFSKNY 578
               ++ +   +  
Sbjct: 263 RAKAKIDAELKEKP 276


>gi|160882061|ref|YP_001561029.1| 60 kDa inner membrane insertion protein [Clostridium
           phytofermentans ISDg]
 gi|160430727|gb|ABX44290.1| 60 kDa inner membrane insertion protein [Clostridium
           phytofermentans ISDg]
          Length = 442

 Score = 80.4 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 12/114 (10%)

Query: 479 ILPFYLPGFMHVGIW-PIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVF 527
           +     PGF   GI  P+  + S F Q K+             P  +    +   MPVV 
Sbjct: 257 LNILDAPGFTFPGILIPLAAAGSQFAQSKLMMTATPQSTSDDTPGAQSLKTMNTVMPVVS 316

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
               +  P G+ IYW  S+V+ I+QQ  I K +  +I + D +  + +K+   +
Sbjct: 317 GIFCTFLPIGVGIYWIASSVVQILQQIFINK-YLDKIDIDDMIAKSVAKSSKRK 369



 Score = 54.6 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 9/126 (7%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVST 386
           +    G     A  M ++++  Y  +      N  I I++ T  +K+L  PL  KQ   T
Sbjct: 6   LTQVTGILGPFAWVMGIILNGIYEFLSIFGMANIAICIVIFTFVIKMLMLPLTIKQQKGT 65

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFA 442
                + P+I +++ K+K    Q   +     M ++Y  +  +PL+GC P+L+ +P+ FA
Sbjct: 66  RLSAKMNPEIQKVQAKYKGKKDQASMQKQQAEMQEIYAKYGASPLSGCLPLLISLPIMFA 125

Query: 443 IYKVIS 448
           +Y+VI 
Sbjct: 126 LYRVIY 131


>gi|167755168|ref|ZP_02427295.1| hypothetical protein CLORAM_00673 [Clostridium ramosum DSM 1402]
 gi|237733408|ref|ZP_04563889.1| membrane protein [Mollicutes bacterium D7]
 gi|167705218|gb|EDS19797.1| hypothetical protein CLORAM_00673 [Clostridium ramosum DSM 1402]
 gi|229383443|gb|EEO33534.1| membrane protein [Coprobacillus sp. D7]
          Length = 298

 Score = 80.4 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 105/228 (46%), Gaps = 14/228 (6%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + +    P+   + +  + VGN    ++  T+ V ++  P+  K  VST  M+ +QP+++
Sbjct: 55  FDFIFVIPLAKGILFINDYVGNVAFGVIGVTIIVNIITLPIMIKSTVSTQKMQLLQPEME 114

Query: 398 ELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           +++ K+K    Q         +  LYK +N++ + G +   L +P+ FA+++ +     +
Sbjct: 115 KIQRKYKGRKDQASQMRQNAEIQNLYKKNNVS-MFGSFATFLTLPIMFAMWQAVQRIDIL 173

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
                +G   +L A   ++I  L   + + +   +  G     M ++  I  K SP    
Sbjct: 174 YSTYIFG--INLGAKPISHIMDLD--IAYIVLLVLVAGTQFFAMQITQ-IMAKRSPKYRP 228

Query: 514 KGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             Q   +N     M +  V+  ++ PA + +YW  +NVI+I++   I 
Sbjct: 229 SQQMKSMNTMNNVMTIFIVYLAATMPAAMSLYWITTNVINIIRTVYIQ 276


>gi|323342260|ref|ZP_08082492.1| hypothetical protein HMPREF0357_10673 [Erysipelothrix rhusiopathiae
           ATCC 19414]
 gi|322463372|gb|EFY08566.1| hypothetical protein HMPREF0357_10673 [Erysipelothrix rhusiopathiae
           ATCC 19414]
          Length = 280

 Score = 80.4 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 91/265 (34%), Gaps = 32/265 (12%)

Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378
                   I        WG   +        ++   N    +   I    V   ++    
Sbjct: 28  TKQVYADKIISLGDSWTWGSDTWFGALFVWPIAQALNFFSQYVGTIGSIVVVTLIIKIIT 87

Query: 379 AKKQYVSTANMKNIQ---PKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAGCW 431
            K    +T   + +Q   P+   +  K++    Q  +      M +L++ H INP+    
Sbjct: 88  IKGSIKATVQQQKMQLIGPEQARIEAKYQGRNDQQAKLQKATEMQKLFEKHEINPMGALG 147

Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491
              LQ+P+  A+Y+ +  S  + +   +G   +L          +  I  F         
Sbjct: 148 GTFLQLPIMIAMYQAVMRSEAIINGTVFGQTLELTPMQGFTQGNIIIIGIFI-------- 199

Query: 492 IWPIIMSLSMFIQM------------KMSPPPADKGQAMILNWMP-VVFVFALSSFPAGL 538
               +M+LS F+ M            K S       QA ++ +   ++ V    ++  G+
Sbjct: 200 ----LMALSQFLSMFLPQYLAKQKIRKRSYEKQPANQANMMMYSSLIMIVVLALNWQVGM 255

Query: 539 IIYWSWSNVISIVQQAVIMKMHGAE 563
            +YW  S +  +VQ   I   +GA+
Sbjct: 256 SLYWMVSALAQLVQTLFINHKYGAK 280


>gi|50290205|ref|XP_447534.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526844|emb|CAG60471.1| unnamed protein product [Candida glabrata]
          Length = 386

 Score = 80.4 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 81/245 (33%), Gaps = 25/245 (10%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQ 382
              +   E +     +Y+ +  +   + Y +   G      I+  T+ V+L   PL  K 
Sbjct: 80  STHVGYLESIGLAQTWYWPSDLVQHALEYVHAYSGLPWWGTIITVTLLVRLALVPLYVKS 139

Query: 383 YVSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438
             + A    I+P++D++ ++   +      Q +     +L   + I         ++QIP
Sbjct: 140 SDTIARNSRIKPELDKINKQLMGTTDMTEGQKVAMKRKKLLADNGIKNRW-LAAPMVQIP 198

Query: 439 VFFAIYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +    +  I       ++        W  DL  ADP       G+        +      
Sbjct: 199 MAIGFFNGIRHMANFPVQGFQDQGILWFNDLTQADPY-----LGLQVITAAVLISFTRLG 253

Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
                  F                    MP++ + A  +  + +++Y++ +   S++Q  
Sbjct: 254 GETGAQQF----------SPTMKKFFTIMPLLSIPATMNLSSAVVLYFAVNGSFSVLQTL 303

Query: 555 VIMKM 559
            +   
Sbjct: 304 FLRNK 308


>gi|299116044|emb|CBN74460.1| Oxa1 or Cox18/Oxa2 homolog, mitochondrial integral inner membrane
           protein [Ectocarpus siliculosus]
          Length = 411

 Score = 80.4 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 79/246 (32%), Gaps = 35/246 (14%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
                 +      M  +          + + I+  TV ++    P+      + A    +
Sbjct: 51  TFKMALYTPPQVAMMAVDYVHATTGMPYWMTIVAITVGIRTAILPIGLLAARNGARTAAM 110

Query: 393 QPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           +P++DEL+   K              ++    L++ H  + +      ++Q+P+F   + 
Sbjct: 111 KPEMDELQAAIKGDQQSSQPRKADRYRQETKALFQKHKASLVMNAALPIVQLPLFIGFFL 170

Query: 446 VISISLEMRHA---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            +    ++          W +DL A DP  IF                   P++  + M 
Sbjct: 171 GLRRMPDVVPEFATGGVLWFQDLGAPDPYMIF-------------------PVMTGVMMM 211

Query: 503 IQMKMSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
              ++                 +  M ++          G+ +YW+ SN  SI+Q     
Sbjct: 212 AMAELGGEGGALAGSSVKMKAGMRGMALLVTPLTMYVSTGVFVYWTTSNFYSILQTLA-F 270

Query: 558 KMHGAE 563
           K  G +
Sbjct: 271 KSSGIK 276


>gi|81428992|ref|YP_395992.1| membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei
           23K]
 gi|78610634|emb|CAI55685.1| Membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei
           23K]
          Length = 329

 Score = 80.4 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 93/264 (35%), Gaps = 39/264 (14%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            F     + +     + +   ++ F+  +  +G AI++ T  V+++  PL   Q      
Sbjct: 38  GFIYGSSYKYIAVPLQHIMERIADFFGGINGYGWAIIIITFVVRMILLPLMLNQSNKMTA 97

Query: 389 MK--------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN--PLAGCWPILLQIP 438
            +         +     + +          L + M+++YK ++ +  P  GC  +L+Q+P
Sbjct: 98  QQEKTRRLKPQLDIVQAQQKVATTPEEKAELSQLMMKVYKENDSSMMPSLGCLTLLIQLP 157

Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           +F  +Y+ I  S E+  + F+G                       +       I  II +
Sbjct: 158 IFSGLYQAIQYSPEISSSHFFG-----------------------IGLGQPNIIITIIAT 194

Query: 499 LSMFIQMKMSPPPADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           L    Q  +S       Q   +       P +  F     PAGL +Y+    +I I+QQ 
Sbjct: 195 LFYVGQSALSLVGMPAEQKKQMQTTVLMSPAITFFISLFAPAGLALYFLAGGMIMIIQQM 254

Query: 555 VIMKMHGAEIGLIDRLRSTFSKNY 578
           +          +  R+     +  
Sbjct: 255 ITT--FIIMPRVKKRIDQEIKEKP 276


>gi|282934543|ref|ZP_06339795.1| putative membrane protein [Lactobacillus jensenii 208-1]
 gi|313471836|ref|ZP_07812328.1| membrane protein [Lactobacillus jensenii 1153]
 gi|281301381|gb|EFA93673.1| putative membrane protein [Lactobacillus jensenii 208-1]
 gi|313449008|gb|EEQ68251.2| membrane protein [Lactobacillus jensenii 1153]
          Length = 326

 Score = 80.4 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 97/254 (38%), Gaps = 32/254 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK----- 390
           + +     + + +            G AI + T  ++ +  PL       +   +     
Sbjct: 48  YQFIGIPIRNIMLATENAIGGSNGAGWAIAIITAVIRFVLLPLMLSTSKKSTIQQEKVSR 107

Query: 391 ---NIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIY 444
                +   D L+++      Q+   +   ++Y+ +N++     GC P+L+Q P    IY
Sbjct: 108 LQDQFKLIQDALKDRSLTPDKQMQISQLQQKVYRENNLSITGGIGCLPLLVQFPFMIGIY 167

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           + ++ S  +  + F+G    ++   P+ +F + G L +     + +        +S   Q
Sbjct: 168 QAVAYSDALYKSNFFG----VSLGKPSLLFAIVGALFYLAQSLLMLR------GVS--EQ 215

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +         Q+ +    P++ +F   S P  L +Y+    +I+++QQ ++   +    
Sbjct: 216 QR------AAMQSTVF-ISPLMTLFISMSTPGALGLYFLVGGIIALIQQVIVT--YIILP 266

Query: 565 GLIDRLRSTFSKNY 578
               ++ +   +  
Sbjct: 267 RAKAKIDAELKEKP 280


>gi|167957434|ref|ZP_02544508.1| putative inner membrane protein translocase component YidC
           [candidate division TM7 single-cell isolate TM7c]
          Length = 267

 Score = 80.4 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 111/264 (42%), Gaps = 43/264 (16%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           +   + +P+F L+   Y++V   +FG+A+++ T+ ++++ +PL  KQ      M+ IQP+
Sbjct: 4   FDLIVVQPIFNLLMALYSIVPGGDFGVAVIIFTILIRIIMWPLISKQLHQVKIMRKIQPE 63

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
           +D ++ K  +   Q+    M+++YK +NI+P       L+Q+P+FF +Y+VI I    R 
Sbjct: 64  LDRIK-KQAKGNRQMQGMMMLEVYKKYNISPFRSIGLTLIQLPIFFGLYRVIQIFTMHRG 122

Query: 456 A---------PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII------MSLS 500
                          + +L A        LFG +   +      GI P++        + 
Sbjct: 123 DLGKYTYNLLENIPAVSNLIANPNNFNNKLFGFVDLTVQAIGKSGISPLLLALAIGAGIM 182

Query: 501 MFIQMKMSPPPAD-------------------------KGQAMILNWMPVVFVFALSSFP 535
            +I  K + P                                 ++ +MP++    + + P
Sbjct: 183 QYISSKQTMPQKQTKKGLRQIMAEAAEGKEADSSEMNAAVMQKMVKFMPIMLTLIMVNLP 242

Query: 536 AGLIIYWSWSNVISIVQQAVIMKM 559
             + +Y      +++VQQ    K 
Sbjct: 243 GAIALYSCTFTAVAVVQQHFFAKK 266


>gi|219111225|ref|XP_002177364.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411899|gb|EEC51827.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 229

 Score = 80.4 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 81/207 (39%), Gaps = 22/207 (10%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK------QSPPQVLQK 413
           +G +I+  TV ++L  FP+      +++ M ++QP++ +++ +++      +        
Sbjct: 12  YGWSIVGVTVILRLCLFPVMVASQQTSSRMAHLQPELQQIKARYEALGTPSRQDQLQFSG 71

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL----EMRHAPFWGWIKDLAAAD 469
            M  ++  + + P       ++Q+P+F  ++  +        E        W  DL A+D
Sbjct: 72  QMKAIFAKYKVKPFRAFAGPVIQMPLFMGMFFGLRKMPSIFPEELSTGGMYWFTDLTASD 131

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529
           P  I      L F     +               QM      +          M +  V 
Sbjct: 132 PLYILPFTSALSFLALIELGKE------------QMVAQNAQSGHLMVNFFRVMSIGMVP 179

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556
              +F A ++ YW+ +N +++ Q A++
Sbjct: 180 VCVNFEAAMLCYWTSNNFMTLTQTAIL 206


>gi|116630024|ref|YP_815196.1| preprotein translocase subunit YidC [Lactobacillus gasseri ATCC
           33323]
 gi|238853789|ref|ZP_04644155.1| preprotein translocase subunit YidC [Lactobacillus gasseri 202-4]
 gi|311110346|ref|ZP_07711743.1| membrane protein chaperone OxaA [Lactobacillus gasseri MV-22]
 gi|116095606|gb|ABJ60758.1| Preprotein translocase subunit YidC [Lactobacillus gasseri ATCC
           33323]
 gi|238833598|gb|EEQ25869.1| preprotein translocase subunit YidC [Lactobacillus gasseri 202-4]
 gi|311065500|gb|EFQ45840.1| membrane protein chaperone OxaA [Lactobacillus gasseri MV-22]
          Length = 327

 Score = 80.4 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 94/257 (36%), Gaps = 36/257 (14%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
               +  F    + + + + +        G AI++ T  V+L+  PL           + 
Sbjct: 40  YAWVFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99

Query: 392 IQPKIDELREKFKQ---------SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
              K+    +  ++              + +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKDNNMSMMGGMGCLPLLIQLPIM 159

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S E+  + F+G                   +       +   I  ++  + 
Sbjct: 160 IGIYQAVAYSKELAASSFFG-------------------ISLGQRSIVLTIIATLLYVIQ 200

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ----AVI 556
            ++ M   P    K   M L   P +  F   S P  L +Y+    +I+I+QQ     +I
Sbjct: 201 GYLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQVITTFII 260

Query: 557 MKMHGAEIGLIDRLRST 573
           M     +  +   L   
Sbjct: 261 MPK--VKKDVAAELNER 275


>gi|45201239|ref|NP_986809.1| AGR143Wp [Ashbya gossypii ATCC 10895]
 gi|12003128|gb|AAG43464.1|AF195007_3 Yer154p [Eremothecium gossypii]
 gi|44986093|gb|AAS54633.1| AGR143Wp [Ashbya gossypii ATCC 10895]
          Length = 378

 Score = 80.0 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 90/253 (35%), Gaps = 28/253 (11%)

Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPL 378
             E    I     +     + +    +  ++ + +   G      I +TTV V+ L FPL
Sbjct: 69  AGEASNHIGYLASINMADSWLWPTGLLQNILEHVHVYAGLPWWGTICVTTVLVRALLFPL 128

Query: 379 AKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILL 435
             K   + A    ++P++++L RE    +     Q+A ++  K    N +        +L
Sbjct: 129 YVKYSDTIAKTSRVKPELEQLTREVMASTDLVEQQQATLKRRKLLQENGIKNRYLVVPIL 188

Query: 436 QIP----VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491
           Q+P     F AI ++ +  ++        W  DLA ADP           F         
Sbjct: 189 QLPLAISFFAAIRQMANYPVDGFSVQGIWWFADLAQADPYLGLQCLTAAMFMGLSRAGGE 248

Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
                     F                +  ++P++ + A  +  +G+++Y + + V S+ 
Sbjct: 249 -----SGAQQF----------SPQMRKVFTFLPLLTIPATMNLASGVVLYLAVNGVCSVA 293

Query: 552 QQAV-----IMKM 559
           Q  +     I + 
Sbjct: 294 QTLLLRTPAIRRK 306


>gi|319653028|ref|ZP_08007133.1| hypothetical protein HMPREF1013_03748 [Bacillus sp. 2_A_57_CT2]
 gi|317395377|gb|EFV76110.1| hypothetical protein HMPREF1013_03748 [Bacillus sp. 2_A_57_CT2]
          Length = 177

 Score = 80.0 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 73/190 (38%), Gaps = 30/190 (15%)

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVIS 448
            ++    +L+   K    Q LQ+ M  LY++H +NPL   GC PI +Q+P+    +  I 
Sbjct: 11  ELEKIQQKLKTAKKPQEQQKLQQEMFGLYQSHGVNPLNAAGCLPIFIQMPILMGFFYAIR 70

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM- 507
            + E+  A  + W            F L     +            II  +  ++Q +  
Sbjct: 71  GNQEIA-AHSFLW------------FNLGHSDIW----------ITIIAGIVYYLQYRFT 107

Query: 508 --SPPPADKGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH-GAE 563
             +       Q   I    PV+ +    + PA L +YW+   +  + Q  +  +++   +
Sbjct: 108 LTNMTAQTPKQMKLIGLLSPVMIMLVSLNAPAALPLYWTAGGIFLVFQSWLGRRLYTKDK 167

Query: 564 IGLIDRLRST 573
              +  +  +
Sbjct: 168 PDAVQIMSES 177


>gi|227889543|ref|ZP_04007348.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           johnsonii ATCC 33200]
 gi|227850021|gb|EEJ60107.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus
           johnsonii ATCC 33200]
          Length = 327

 Score = 80.0 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 94/258 (36%), Gaps = 32/258 (12%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
               +  F    + + + + +        G AI++ T  V+L+  PL           + 
Sbjct: 40  YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFAVQLIVMPLRLASQRKMTTQQE 99

Query: 392 IQPKIDELREKFKQ---------SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
              K+    +  ++              + +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S E+  + F+G                   +       +   I  ++  + 
Sbjct: 160 MGIYQAVAYSKELAASSFFG-------------------ISLGQRSIILTIIATLLYVVQ 200

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            ++ M   P    K   M L   P +  F   S P  L +Y+    +I+I+QQ +     
Sbjct: 201 GYLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLITT--F 258

Query: 561 GAEIGLIDRLRSTFSKNY 578
                +   + +  ++  
Sbjct: 259 VIMPKVKRDVAAELNERP 276


>gi|182438478|ref|YP_001826197.1| hypothetical protein SGR_4685 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178466994|dbj|BAG21514.1| putative membrane protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 256

 Score = 80.0 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 22/229 (9%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           M      F  +   +  L+  F+    +   AI+L T  V+L   PL++           
Sbjct: 1   MSAFMSAFASLVGSLADLLQPFFQ-TASTAAAIVLFTALVRLAVHPLSRAAARGQKARSR 59

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +QP+I ELR+K  ++P ++ QKA+++L+    ++PL+GC P LLQ+P FF +Y  +  S 
Sbjct: 60  LQPQIAELRKKHGKNPEKM-QKAIMELHAAEKVSPLSGCLPSLLQMPAFFLLYH-LFSSG 117

Query: 452 EMRHAPFWGWIKD-LAAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMK--- 506
            +   P      D L A          G    F   G++++G++ I+ +++ F   +   
Sbjct: 118 SIGGEPNALLSHDLLGAPLGGRWHDALGNGGMFGAQGWVYLGLFAIVTAVATFNYGRTKR 177

Query: 507 ------MSPPPADKGQA-----MILNWMPVVFVFALSS---FPAGLIIY 541
                 M+P     GQA      +   MP++  F L +    P    +Y
Sbjct: 178 QLAANPMTPAAGPDGQAVPGMGAMAKVMPLMSFFTLITVAVVPLAAALY 226


>gi|511461|gb|AAA56921.1| unknown [Coxiella burnetii]
          Length = 131

 Score = 79.6 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 27/42 (64%)

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
           ++  +PV+F     +FPAGL++YW  +NV+  +QQ  + K +
Sbjct: 1   MMWILPVIFTVFFINFPAGLVLYWITNNVVQTLQQWYVNKTY 42


>gi|224477076|ref|YP_002634682.1| hypothetical protein Sca_1592 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|229462937|sp|Q9RGS4|OXAA_STACT RecName: Full=Membrane protein oxaA; Flags: Precursor
 gi|222421683|emb|CAL28497.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 289

 Score = 79.6 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 104/258 (40%), Gaps = 41/258 (15%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ---- 393
           +  F+     ++     +   ++G+AI++  + ++++  P     Y ++  M+       
Sbjct: 33  YNTFVKNMDNIIHWLGASFNNDYGLAIIVLVLAIRIIVLPFMLSNYKNSHMMREKMIIAK 92

Query: 394 PKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKV 446
           P +D ++EK +++  Q       + M+++YK +++NP+    GC P+L+Q+P+   ++ V
Sbjct: 93  PDMDAVKEKVQRARTQEDKMAANQEMMEVYKKYDMNPMQSMLGCLPMLIQMPIIMGLFFV 152

Query: 447 I--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           +       +     + W  +LA  D                         +I  +  F+Q
Sbjct: 153 LKYPSPGGITEHSHFLWF-NLAKPDIW---------------------ITVIAGVLYFLQ 190

Query: 505 MKMSPPPADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
             +S       Q  +        P++ ++   S  A L +YWS S    IVQ  +    +
Sbjct: 191 AYVSTFSMPPEQKQMSYMMMIISPIMIIWVSLSSAAALGLYWSVSAAFLIVQTYIANAYY 250

Query: 561 --GAEIGLIDRLRSTFSK 576
              A+  +   + +   +
Sbjct: 251 SKKAKEEVAPMIAAYEKE 268


>gi|328787232|ref|XP_391901.3| PREDICTED: mitochondrial inner membrane protein OXA1L-like [Apis
           mellifera]
          Length = 426

 Score = 79.6 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 97/269 (36%), Gaps = 35/269 (13%)

Query: 322 EKDLAIPRFEMLIDWGWFYF-IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380
                 P FE L   G+  F +++  +  +    +L   +   I+LT+  +KLL FP + 
Sbjct: 116 LHANGEPTFESLGLGGYGPFGLSQYFYEWLHISCDL--PWWATIILTSTLIKLLTFPCSI 173

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG---CWPILLQI 437
               + A + NI P++ +++E   ++                    L      +PI   I
Sbjct: 174 SIQKNNAKLNNILPQMVKIQENMTEARKCGNSMEAAHFAAELETLFLKNNIKIFPIGAHI 233

Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
           P+F A+ ++ S  +E        W  DL   D                      + P+  
Sbjct: 234 PIFIALREMTSKPVESLKEGGLWWFTDLTLPDQYY-------------------LLPLCT 274

Query: 498 SLSMF-IQMK--MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ-Q 553
           +++M+ I  +   +          +   +PV+       FP  ++ +W+ SN I++++ Q
Sbjct: 275 TVTMYVISTRALKNSGNVSPIMRHLFKAIPVISFLFAMRFPGAILCHWTISNFITLIENQ 334

Query: 554 AVIMKM------HGAEIGLIDRLRSTFSK 576
            +  K           I     +R    K
Sbjct: 335 LLSTKKVRMFCNIPPLIKHKANVREGQKK 363


>gi|300361213|ref|ZP_07057390.1| membrane protein OxaA 2 [Lactobacillus gasseri JV-V03]
 gi|300353832|gb|EFJ69703.1| membrane protein OxaA 2 [Lactobacillus gasseri JV-V03]
          Length = 327

 Score = 79.6 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 94/257 (36%), Gaps = 36/257 (14%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
               +  F    + + + + +        G AI++ T  V+L+  PL           + 
Sbjct: 40  YAWVFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99

Query: 392 IQPKIDELREKFKQ---------SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
              K+    +  ++              + +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKDNNMSMMGGMGCLPLLIQLPIM 159

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S E+  + F+G                   +       +   I  ++  + 
Sbjct: 160 IGIYQAVAYSKELAASSFFG-------------------ISLGQRSIVLTIIATLLYVIQ 200

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ----AVI 556
            ++ M   P    K   M L   P +  F   S P  L +Y+    +I+I+QQ     +I
Sbjct: 201 GYLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQVITTFII 260

Query: 557 MKMHGAEIGLIDRLRST 573
           M     +  +   L   
Sbjct: 261 MPK--VKKDVAAELNER 275


>gi|224477730|ref|YP_002635336.1| putative lipoprotein [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222422337|emb|CAL29151.1| putative lipoprotein precursor [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 287

 Score = 79.6 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 106/241 (43%), Gaps = 40/241 (16%)

Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ--- 393
           ++   AKPM  L+ +   NL  ++G+AI++  + ++L+  P    Q  +   M+ +    
Sbjct: 31  FYNTFAKPMDHLLHWLGNNLGHDYGLAIIIIVLAIRLVMLPFMLSQTKNGQMMRKVMDFA 90

Query: 394 -PKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYK 445
            P+++ ++EK K++  Q       + M+++YK + +NP+    GC PIL+Q+P+ F +Y 
Sbjct: 91  KPEMNAVQEKVKRARTQEEKMAANQEMMEVYKKYELNPMKSMLGCLPILIQMPILFGLYV 150

Query: 446 VI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
            +       +   P + W  DL   D                      +  II  +  F+
Sbjct: 151 SLKWPSHGGITAHPNFLWF-DLTKPD---------------------ILITIIAGVLYFL 188

Query: 504 QMKMSPPPADKGQAMILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           Q  +S     K Q  +   M     +  ++   +  + L +YWS S +  IVQ  V  + 
Sbjct: 189 QSLVSLENMPKEQRQMGYMMMIISPIFIIYISYTSASALGLYWSVSAIFMIVQTFVANRY 248

Query: 560 H 560
           +
Sbjct: 249 Y 249


>gi|154496118|ref|ZP_02034814.1| hypothetical protein BACCAP_00402 [Bacteroides capillosus ATCC
           29799]
 gi|150274673|gb|EDN01737.1| hypothetical protein BACCAP_00402 [Bacteroides capillosus ATCC
           29799]
          Length = 474

 Score = 79.6 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 62/302 (20%), Positives = 115/302 (38%), Gaps = 75/302 (24%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
                 +  P   ++  FY L  N+GIA++L  V VK++ FPL+ K   S   M  +  +
Sbjct: 1   MQGIQLLLTPFVWVLMLFYELFDNYGIALILFAVLVKVILFPLSIKAKRSMIQMNMLNGQ 60

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--ISLEM 453
           + +L+ K   +        + +LY+   +NP+ GC   +L + +   +Y +I   ++  M
Sbjct: 61  MQKLQ-KMYGNNRDKYNLEVQKLYEKEKVNPMGGCLWSMLPLVILLPLYAIIRQPLTYLM 119

Query: 454 RHAPFW-----------------GWIKDLAAADPTNI----------------------- 473
              P                   GWIK+  AAD  N+                       
Sbjct: 120 NLTPDVISEVARVVDWNNAAVSAGWIKE--AADFANVGYNQLYLASLITPENIGAVQAVA 177

Query: 474 -------FTLFGILPFYLPGF------------MHVGIWPIIMSLS----MFIQMKMS-- 508
                  F   G+    +P +            + + + PI+ + S      I MK +  
Sbjct: 178 EGARVINFNFLGLNLAQMPQWQFWTWSSVDWAHIGLFLMPIVSAGSGLLFSLIMMKTNAV 237

Query: 509 -----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                   A+     +L   P++ ++   + PAGL +YW   NV+S++Q+ +  K+   +
Sbjct: 238 NQQSRNAAANSTNKTMLIISPLMSLWIGFAMPAGLSVYWISQNVLSMLQEFLAGKLLKKD 297

Query: 564 IG 565
             
Sbjct: 298 YE 299


>gi|319936675|ref|ZP_08011088.1| membrane protein [Coprobacillus sp. 29_1]
 gi|319808232|gb|EFW04797.1| membrane protein [Coprobacillus sp. 29_1]
          Length = 286

 Score = 79.6 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 103/244 (42%), Gaps = 30/244 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + + +  P+   + +  +++GN    ++  T+F+ +L  P+  K  VST  M+ +QP+++
Sbjct: 55  FDFILTIPIAKGILFITDILGNVAWGVVGMTIFINILILPIMIKSTVSTQKMQMLQPELE 114

Query: 398 ELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           +++ K+     Q  Q      M  LYK H+++  +      L +P+  A+++ +     +
Sbjct: 115 KIQRKYAGRKDQASQMRQSAEMQALYKKHDVSMFSSF-TTFLTLPIMLAMWQSVQRIEIL 173

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI-IMSLSMF-------IQM 505
             A F+G               L       +     V I  + I+ ++ +       I +
Sbjct: 174 YQATFFG-------------LNLGATPMSQITSGNWVYIIIVAIVGITQYLAIEINNIML 220

Query: 506 KMSPPPADKGQAMILNWMPV----VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           K +P      Q   +  M +    + V+   S P  + +YW  +++++I++   I   H 
Sbjct: 221 KRNPRYKVSKQQKSMKTMNIVMTAMIVWFALSMPTAMSLYWITTSLVTIIRTVYIQIYHV 280

Query: 562 AEIG 565
            +  
Sbjct: 281 EKKK 284


>gi|253581091|ref|ZP_04858351.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847627|gb|EES75597.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 429

 Score = 79.6 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 84/281 (29%), Gaps = 28/281 (9%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
            N   A  K         +   +      +     + I   ++ ++      VG+    I
Sbjct: 85  NNDTAAMQKMQEETQAVYQKYGVSPTGSCVQLAIQFPILMALYQVIYKIPAYVGSVR-DI 143

Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424
           + + V                  + K  + ++     K   +               + +
Sbjct: 144 LASAVTSITGVNGYTDILQQFITDNKMTRVQLIMDGSKATSNSVTDFL---------YAL 194

Query: 425 NPLAGCWPILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           +P    W  L +   F      ++ +  E+ H   +  +               G     
Sbjct: 195 SPSQ--WKTLAETSQFAGFTDTLNSTAKEISHVQNFFGLNIADQPLTYIKAAFVGGSALL 252

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DKGQAMIL-------NWMPVVFVFALS 532
               + +   PI+   +  I +K+ P  A    D  Q  ++         MP++      
Sbjct: 253 AIVAILI---PILAWATQMINLKLMPQAAQQSGDSQQDAMMNSMKTMNMVMPLMSAVFCF 309

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           +FP GL IYW  S  +  VQQ VI K    +I + D +   
Sbjct: 310 TFPVGLGIYWVASAAVRSVQQVVINKKMD-KIQIEDLISEN 349



 Score = 50.8 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 59/118 (50%), Gaps = 7/118 (5%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
                +I   ++ L++ F   + N GI I++ ++ +  L  PL  KQ   +     +QP+
Sbjct: 16  ATVMGWIMDGIYRLLNIFG--IQNIGICIVIFSILIYALMTPLQIKQQKFSKLSAIMQPE 73

Query: 396 IDELREKFKQSP-----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           + ++++K+K         Q +Q+    +Y+ + ++P   C  + +Q P+  A+Y+VI 
Sbjct: 74  LQKIQKKYKGKNNDTAAMQKMQEETQAVYQKYGVSPTGSCVQLAIQFPILMALYQVIY 131


>gi|325001534|ref|ZP_08122646.1| putative inner membrane protein translocase component YidC
           [Pseudonocardia sp. P1]
          Length = 302

 Score = 79.6 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 95/264 (35%), Gaps = 45/264 (17%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              F+  P+  +M  ++ L G          + ++++   + V+ L    A  +  S   
Sbjct: 1   MLDFLYYPVSFVMRLWHELFGALLGPASGLAWALSVVFLVLTVRALLVRPAWSRMRSARI 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
            + + P++  LREK +    + L +A   L++ H  +P+AG    LLQIPVF A+  V+ 
Sbjct: 61  TRALGPQLTALREKHR-HDSRRLAEATAALHREHGSSPVAGLGTALLQIPVFVALLHVLR 119

Query: 449 I------SLE----------------------MRHAPFWGWIKDLAAADPTNIFTLFGIL 480
                  S E                      +  AP   W+   A    +         
Sbjct: 120 SFNRPGLSFEQNAAIANYAFGPDQVASFLQARLFGAPLSAWLTMPADQLASFGGAPVAAG 179

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV------FVFALSSF 534
                      +  +   LSM    ++ P     G   +L  MP V              
Sbjct: 180 AVAAVVVPLAVLAAVCTHLSMRF-ARVDPSGQPAGVGRVLAAMPWVAPLGVLVGGLFFPV 238

Query: 535 PAGLIIYWSWSNVISIVQQAVIMK 558
           P  L++YW   ++ ++VQQ VI +
Sbjct: 239 PIALLLYWMTGSLATLVQQLVITR 262


>gi|291547601|emb|CBL20709.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
           [Ruminococcus sp. SR1/5]
          Length = 440

 Score = 79.6 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 14/120 (11%)

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-------------ADKGQ 516
           P      F      L   +   + P++   +  + +K+ P                    
Sbjct: 242 PLYYIMEFFKNHGSLLLAIVALLIPVLAWATQMLNLKLMPQAATQPADGNDQASAMANSM 301

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
             +   MP++  F   +FP GL IYW  S V+   QQ  I + H  ++ + D +     K
Sbjct: 302 KTMNMVMPLMSAFFCFTFPVGLGIYWIASAVVRSAQQFAINR-HLDKMNIDDLVNENMKK 360



 Score = 52.7 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 58/120 (48%), Gaps = 5/120 (4%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
                  +I   ++ ++   +  + N G+ I++ ++ +     PL  KQ   +     +Q
Sbjct: 18  QIASVMGWIMDGIYKMLDGLFG-IQNIGLCIIIFSILIFAFMTPLQIKQQKFSKLSAIMQ 76

Query: 394 PKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           P+I ++++K++    Q     + +    +Y+ + ++P   C  + +Q+P+ FA+Y+VI  
Sbjct: 77  PEIQKIQKKYQGKKDQASMMKMNEETQAVYQKYGVSPTGSCVQLAIQMPILFALYQVIYR 136


>gi|296425195|ref|XP_002842128.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638387|emb|CAZ86319.1| unnamed protein product [Tuber melanosporum]
          Length = 479

 Score = 79.6 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 89/243 (36%), Gaps = 39/243 (16%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTA 387
            F       + Y     +  L+ + +   G      I+L+   ++LL FP   K   + A
Sbjct: 130 GFLKEFGLDYGYGFTTLVQSLIEHVHVYAGTPWFATIILSVGVLRLLQFPFYLKMSDTAA 189

Query: 388 NMKNIQPKIDELREKFKQSP-------PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
            MK + P    L +K + +            +  + QLY    +      +PI  Q+PVF
Sbjct: 190 KMKELNPFAVPLTKKMRDAQIAGDTPGMVAARTELGQLYSRSGVKRRWLFFPI-SQVPVF 248

Query: 441 FAIYKVISIS-----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           +  YK +         E+       W  DL+ ADP                     + P+
Sbjct: 249 YGFYKNLRGMSDIPIPEL-TEGGLSWFTDLSVADPFY-------------------LLPM 288

Query: 496 IMSLSMFIQMKMSPPPADKGQAMILN-----WMPVVFVFALSSFPAGLIIYWSWSNVISI 550
             S S+F Q+ +        Q   +      ++P+V     S +PA L  Y+  +++ S+
Sbjct: 289 ATSASLFAQLSLGGEAGTNLQTEQMKKVLLIFLPLVTFVFTSQWPAVLTFYFLCNSLFSL 348

Query: 551 VQQ 553
           VQ 
Sbjct: 349 VQT 351


>gi|326779124|ref|ZP_08238389.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf.
           griseus XylebKG-1]
 gi|326659457|gb|EGE44303.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf.
           griseus XylebKG-1]
          Length = 256

 Score = 79.6 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 22/229 (9%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           M      F  +   +  L+  F+    +   AI+L T  V+L   PL++           
Sbjct: 1   MSAFMSAFASLVGSLADLLQPFFQ-TASTAAAIVLFTALVRLAVHPLSRAAARGQKARSR 59

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +QP+I ELR+K     P+ +QKA+++L+    ++PL+GC P LLQ+P FF +Y  +  S 
Sbjct: 60  LQPQIAELRKKH-GKNPERMQKAIMELHAAEKVSPLSGCLPSLLQMPAFFLLYH-LFSSG 117

Query: 452 EMRHAPFWGWIKD-LAAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMK--- 506
            +   P      D L A          G    F   G++++G++ I+ +++ F   +   
Sbjct: 118 SIGGEPNALLSHDLLGAPLGGRWHDALGNGGMFGAQGWVYLGLFAIVTAVATFNYGRTKR 177

Query: 507 ------MSPPPADKGQA-----MILNWMPVVFVFALSS---FPAGLIIY 541
                 M+P     GQA      +   MP++  F L +    P    +Y
Sbjct: 178 QLAANPMTPAAGPDGQAVPGMGAMAKVMPLMSFFTLITVAVVPLAAALY 226


>gi|260584053|ref|ZP_05851801.1| membrane protein OxaA 2 [Granulicatella elegans ATCC 700633]
 gi|260158679|gb|EEW93747.1| membrane protein OxaA 2 [Granulicatella elegans ATCC 700633]
          Length = 314

 Score = 79.6 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 97/251 (38%), Gaps = 35/251 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + Y       +L      + GN+ I+IM+ ++ V+++  P   KQ  +    +     + 
Sbjct: 38  YDYLAVPTQTILNWIASAIGGNYVISIMIVSIVVRIILMPTMFKQMKTMLMNQEKMALLK 97

Query: 398 ELREKFKQS--------PPQVLQKAMIQLYKTHNIN----PLAGCWPILLQIPVFFAIYK 445
              +K  +             +Q+  + +Y+ +N++      +GC P+L+ +PV+ A+Y 
Sbjct: 98  PYIDKMNERYGDNPTPEQRMEVQQYTMDIYRLNNVSLTGGVASGCLPVLVTMPVYSALYN 157

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
            I  S E+ ++ F G                  +   YLP  +   +  +I     +I  
Sbjct: 158 AILYSPEISNSSFMG----------------VSLGSTYLPIAIATAVIYLIQG---YISQ 198

Query: 506 KMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            +      K QA    + MPV+ +       AG+ IY+  S + +I+Q  +         
Sbjct: 199 -LYMDETQKAQAKATLFLMPVMMLMFTVGTAAGIGIYFFTSGLTAILQTWIQN--QFIRP 255

Query: 565 GLIDRLRSTFS 575
            +   + +   
Sbjct: 256 KVKAEIDAELE 266


>gi|229829514|ref|ZP_04455583.1| hypothetical protein GCWU000342_01606 [Shuttleworthia satelles DSM
           14600]
 gi|229791945|gb|EEP28059.1| hypothetical protein GCWU000342_01606 [Shuttleworthia satelles DSM
           14600]
          Length = 428

 Score = 79.6 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 8/105 (7%)

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DKG--QAMIL-NWMPV 525
           I   F          +   + PI      F+ MK+ P  A    D+   Q  ++   MP+
Sbjct: 243 IKQGFFADQKDWGLVIVALLIPIASYFFQFLSMKLMPTAAGAGSDQMEQQMKMMNTMMPL 302

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
           V +    + P G ++YW   +V+ ++QQ  + K H  ++ L   +
Sbjct: 303 VSLVFGFTLPVGFVLYWIIGSVVRVIQQYFLNK-HFEKMDLQQII 346



 Score = 52.7 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 49/97 (50%), Gaps = 4/97 (4%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQ 412
           + +  + I++ T+ + +   PL  +Q   +   + I P+   +++K+K    Q      Q
Sbjct: 38  IKDIWVTIVVFTIIIYMALLPLTVRQQKFSILQQKIAPETKAIQKKYKGKRDQASMMAQQ 97

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           +    LY  + I+P+  C  +++Q+P+ F +Y+VI  
Sbjct: 98  EEQQALYDKYGISPMGSCLQMIIQLPILFGLYRVIYN 134


>gi|317148369|ref|XP_001822724.2| hypothetical protein AOR_1_948134 [Aspergillus oryzae RIB40]
          Length = 497

 Score = 79.6 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 111/311 (35%), Gaps = 40/311 (12%)

Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325
           ++  + +  ++  S  H    A+F++         +   T    A  ++   +  ++   
Sbjct: 49  NQSLAGNLSWRPASSIHHASAARFNSTASAASASTATAATAVETAAPEQASDLSDFDITA 108

Query: 326 AIPRFEMLIDW--GWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQ 382
              +   L D    + +  +  +   + +F+   G    A I+ T + V+L         
Sbjct: 109 IPEKIGYLKDLGLDYGWGPSSMIEYFIEHFHIWAGLPWWASIVGTGLLVRLALLKPMLSA 168

Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILL 435
              +  + N++  +  LR K  Q+  +     M+Q       L+  H I          +
Sbjct: 169 ADVSTKIHNLKDVVAPLRAKMAQAANEKRHADMMQTRAELQQLHSDHGIK-FYKTMIPFI 227

Query: 436 QIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491
           Q+P+ F  Y+V+     +      A   GWIKDL  ADP                     
Sbjct: 228 QLPLGFGCYRVVKGMTSLPVPGLAAESVGWIKDLTVADPYF------------------- 268

Query: 492 IWPIIMSLSMFIQMK------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
           + P   + +M++  K      M+          +L  MP      +S FP+ L +Y+  +
Sbjct: 269 LLPAATAFAMYMSFKKGGENGMNQMANSPVGRAVLYGMPAFSFAFMSFFPSALQLYFLST 328

Query: 546 NVISIVQQAVI 556
            + ++ Q  ++
Sbjct: 329 GLFALGQAYML 339


>gi|153815419|ref|ZP_01968087.1| hypothetical protein RUMTOR_01654 [Ruminococcus torques ATCC 27756]
 gi|145847278|gb|EDK24196.1| hypothetical protein RUMTOR_01654 [Ruminococcus torques ATCC 27756]
          Length = 441

 Score = 79.3 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/316 (15%), Positives = 107/316 (33%), Gaps = 31/316 (9%)

Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
           F      L       Q KF+     + P   I      +A  K+  ++   ++++ +   
Sbjct: 50  FTIIVYTLLLPLTIKQQKFTKMSAVMQP--EIQKIQKRYANKKDQASMLKQQEEMNMVYD 107

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
           +  +        +    + +   Y +V N    I      V+ ++ PL +K   +T   K
Sbjct: 108 KYGLKMSSGCLPSLLQLVFLFGLYPVVQN----IPEYVTKVRNVYIPLVEKIQATTGYEK 163

Query: 391 NIQPKIDEL--REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
            +      L    +            ++  +++   N L      + ++P F ++     
Sbjct: 164 IMSSLATGLVPGAESLDYTKAGNMIEVMYKFQSSTWNEL------VDKMPKFESVVNNTM 217

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
              E+ H   +  +   A            +    + G +   + P++  L+ FI +K+S
Sbjct: 218 S--EVSHLNNFLGVDIGAHP---WNLLTDALAAASIAGVIIAVLIPVLAGLTQFISVKLS 272

Query: 509 PP-----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
                        P       +   MP++ V    + PAGL +YW  S  +  VQQ  + 
Sbjct: 273 QAGAGGAAMSDDNPMAASMKTMTYTMPLISVVFGFTLPAGLGLYWVASAAVRSVQQLAVN 332

Query: 558 KMHGAEIGLIDRLRST 573
           K    +  + D ++  
Sbjct: 333 KYLSKK-SIDDIIKEN 347



 Score = 48.1 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 5/128 (3%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
           ++  I     + + + M  + +    + + N G+AI++ T+ V  L  PL  KQ   T  
Sbjct: 12  YDWPIIKQVSWLLGQVMNGIYNALSAIGIENIGVAIIVFTIIVYTLLLPLTIKQQKFTKM 71

Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
              +QP+I ++++++     Q      Q+ M  +Y  + +   +GC P LLQ+   F +Y
Sbjct: 72  SAVMQPEIQKIQKRYANKKDQASMLKQQEEMNMVYDKYGLKMSSGCLPSLLQLVFLFGLY 131

Query: 445 KVISISLE 452
            V+    E
Sbjct: 132 PVVQNIPE 139


>gi|227487666|ref|ZP_03917982.1| inner membrane protein translocase component YidC [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227541375|ref|ZP_03971424.1| inner membrane protein translocase component YidC [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227092360|gb|EEI27672.1| inner membrane protein translocase component YidC [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227182926|gb|EEI63898.1| inner membrane protein translocase component YidC [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 321

 Score = 79.3 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 104/264 (39%), Gaps = 53/264 (20%)

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           +    +    + ++I++ T  V+ L          S   M+ +QPK+  ++EK+K +P +
Sbjct: 22  LIMNPDWGVTWALSIVMLTFTVRALLLKPTMNSMRSMRKMQILQPKMQAIQEKYKNNPEK 81

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS--------------LEMRH 455
           +  +   ++ K    +P+ GC P+L+Q+PVF  ++ V+                  E  +
Sbjct: 82  M-MEETRRVQKEVGASPVKGCLPMLVQMPVFIGLFHVLRSFNRTGTGRGQLGLSIEENYN 140

Query: 456 APFWGWIKD--------------LAAA--DPTNIFTLFGILPFYLPGFMHVGI-WPIIMS 498
            P + +  D              L+A    P +++  FG   F     + V   + ++++
Sbjct: 141 TPNYIFGVDDVRSFLEARLFGVPLSAYISMPEDMYHAFGEGDFTRTNVIMVAAPFILLIA 200

Query: 499 LSMFIQMKMS------------PPPADKGQAM---------ILNWMPVVFVFALSSFPAG 537
           ++  +  + S                +  QA          +L +MP+  +F    +  G
Sbjct: 201 VATHLNGRFSVKRQKQRLASGKQKAPENDQAQMSMNMMNNMMLYFMPLTILFTGFVWHIG 260

Query: 538 LIIYWSWSNVISIVQQAVIMKMHG 561
           L+ Y + +N+ +  QQ  +     
Sbjct: 261 LLCYMAGNNIWTFCQQRYVFSKMD 284


>gi|241890041|ref|ZP_04777339.1| stage III sporulation protein J [Gemella haemolysans ATCC 10379]
 gi|241863663|gb|EER68047.1| stage III sporulation protein J [Gemella haemolysans ATCC 10379]
          Length = 297

 Score = 79.3 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 89/250 (35%), Gaps = 46/250 (18%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----- 391
            ++    KPM + +S  +   G++G +I++ T+ ++LL  P     Y      +      
Sbjct: 30  TFYDIFVKPMDLSLSKIHEYTGSWGWSIVIITLVIRLLVLPFMLNNYKVQNKSRKGQELA 89

Query: 392 ------IQPKIDELREK-----------FKQSPPQVLQKAMIQLYKTHNINPLA--GCWP 432
                 +Q K    +EK             +S    LQ+  + + K ++  PL+  GC P
Sbjct: 90  RPELEVLQKKQQAAKEKEARAISNEEKMQARSELMELQREQMAILKKYDAMPLSLGGCLP 149

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +L+ +P    ++  +S    +  A            D T +    G+       +    I
Sbjct: 150 MLIPLPFLTGLFYTLSNP--LYSAGII---------DSTFL----GVFNLGTRSYTLPII 194

Query: 493 WPIIMSLSMFIQMKMSPPPADK-------GQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
             ++ ++   IQM + P P             M+    P++           + +Y+   
Sbjct: 195 AFVVYAIQTKIQMSLMPTPTQPGQEQMQSQMKMMQWLSPIMITGFSFWVAGAVAVYYIVG 254

Query: 546 NVISIVQQAV 555
            +  I Q  +
Sbjct: 255 GLFMIFQTYL 264


>gi|85104274|ref|XP_961714.1| hypothetical protein NCU01102 [Neurospora crassa OR74A]
 gi|28923262|gb|EAA32478.1| predicted protein [Neurospora crassa OR74A]
          Length = 462

 Score = 79.3 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 87/298 (29%), Gaps = 42/298 (14%)

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
           Q +Y S G     A  +A      P  S                + +  + +    F   
Sbjct: 66  QVRYASTGPDAAVAADAATAAAAAPSSSPVDAVAATPVELTGSDLLNLPEQIG---FLKT 122

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL-----LFFPLAKKQYVSTAN 388
           +   + + +   M  L  + Y   G    A +     +            +++       
Sbjct: 123 LGLDYGWGVTSMMQWLTEHVYVYSGLPWWATLAAVAAIVRVAIFKPSLGASQESQKMQDL 182

Query: 389 MKNIQPKIDELREKFKQSPPQV------LQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
            KN +      + K               ++ M  + K   IN     +   +Q+P+ F 
Sbjct: 183 NKNPKYAAIMAKVKEASFDTTKQNDLVKYRQEMALMTKNAGINYFK-VFIPFIQVPIGFG 241

Query: 443 IYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           ++++I       +E        W  DL  ADP                       PI  +
Sbjct: 242 MFRLIRGMAALPVESLETGGTLWFPDLTVADPYF-------------------ALPIASA 282

Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFV----FALSSFPAGLIIYWSWSNVISIVQ 552
                 M+   P     QA ++  M +V V    FA +  PA L  Y+  S +    Q
Sbjct: 283 CLFVASMRKPIPYMAPQQARMMKSMGLVLVPVSIFATAWLPAALQWYFLVSAIGQYFQ 340


>gi|320589579|gb|EFX02035.1| mitochondrial export translocase [Grosmannia clavigera kw1407]
          Length = 532

 Score = 79.3 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/243 (12%), Positives = 74/243 (30%), Gaps = 39/243 (16%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKN 391
            +   + +  +     L+ + +   G    A I LT +  +   F  +      +A  + 
Sbjct: 167 AMGLDFGWGPSSMCMWLLEHVHVYTGLPWWASIGLTVLLFRSAIFFPSLTAAEQSARFQK 226

Query: 392 IQPKIDELREKFK--------QSPPQVLQKAMIQLYKTHNIN---PLAGCWPILLQIPVF 440
           ++          +            Q     +    K             +  ++ +P  
Sbjct: 227 LRADPKYAAAMTEMQQSAMRGGQLAQGRAMELRMTTKRMQAAAGVSTWKMFIPMINVPFG 286

Query: 441 FAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           + +++++     +           W +DL   DP                     + PI 
Sbjct: 287 YGMFRLLRSMALLPVPALETDGLLWFQDLTVPDPFF-------------------VLPIA 327

Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS----SFPAGLIIYWSWSNVISIVQ 552
            +  M++  + +       QA ++  M +V             AGL +++  S+V+ +VQ
Sbjct: 328 SATIMYLIFRNNIKYMAPEQAQLMKMMQIVITPVSILVTVKMSAGLTLFFFLSSVLQMVQ 387

Query: 553 QAV 555
             +
Sbjct: 388 TWL 390


>gi|150864659|ref|XP_001383584.2| hypothetical protein PICST_57776 [Scheffersomyces stipitis CBS
           6054]
 gi|149385915|gb|ABN65555.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 335

 Score = 79.3 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 93/239 (38%), Gaps = 23/239 (9%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
            I     ++    +  ++   +   G      I++ T+ V++  FP   K   + A    
Sbjct: 48  SIGMAQGWYPTDIVERMLELTHVYTGLPWWGTIVVVTIAVRVALFPFYMKASANVARTAK 107

Query: 392 IQPKIDE----LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL---LQIPVFFAIY 444
           ++P++D+    LR         V  +A  ++ K +NI+  A   PIL   L    F A+ 
Sbjct: 108 VKPQLDQALADLRAAETPQEQYVAMQARKKVMKDNNISMTAQMAPILQLPLAYGFFQALR 167

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           K+ +  +E        W +DLA+ DP                 +           +   Q
Sbjct: 168 KMANYPVEGFSTGGIYWFEDLASVDPYLGLQGIAAAVIIAVVRLG--------GETGSHQ 219

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           M             I   +P++ +F   +F A +++Y++ ++V+S++Q +V+      +
Sbjct: 220 MAKPM-------KNIFTVVPLISIFITKNFSAAVVLYFAVNSVVSLIQSSVLRNKSFRK 271


>gi|259046600|ref|ZP_05737001.1| membrane protein OxaA2 [Granulicatella adiacens ATCC 49175]
 gi|259036765|gb|EEW38020.1| membrane protein OxaA2 [Granulicatella adiacens ATCC 49175]
          Length = 315

 Score = 79.3 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 97/257 (37%), Gaps = 41/257 (15%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           + W + Y +    ++L        GN+ IAI++ +V V+++  P    Q  S    +   
Sbjct: 40  VGWLYEYLVVPTQWLLNQIASMFNGNYAIAIVIVSVLVRVVLMPTQFHQMKSMLVQQEKM 99

Query: 394 PKIDELREKFKQSPPQV--------LQKAMIQLYKTHNINPL----AGCWPILLQIPVFF 441
             +     +      Q         +Q+  + LYK +N++ +    +GC P+L+ +P++ 
Sbjct: 100 AVLKPYIAEITARAEQAATPQEKLEIQQEQMDLYKLNNVSLMGGLGSGCLPLLITLPIWS 159

Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501
            +Y  I +S E+            +++D   I      +P             I  +   
Sbjct: 160 GLYNAILLSNEI------------SSSDFMGIALGKEFVP-----------LAIATAALY 196

Query: 502 FIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           +IQ  +S    D+        +   +PV+        PAG+ IY+  S +I I+Q  +  
Sbjct: 197 YIQSLVSQMGMDEETKKQSRSMNYILPVMMFMMTFQSPAGVGIYFFASALIQILQSWIQN 256

Query: 558 KMHGAEIGLIDRLRSTF 574
                   +  ++    
Sbjct: 257 --TYLRPKIKAQIDEEL 271


>gi|300933178|ref|ZP_07148434.1| putative preprotein translocase subunit [Corynebacterium resistens
           DSM 45100]
          Length = 327

 Score = 79.3 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 100/261 (38%), Gaps = 42/261 (16%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI--- 416
           + I+I++  V ++ L FPLA +QY S  ++ N++P +  L  ++K       +K  +   
Sbjct: 31  WVISIVMLVVTIRGLLFPLAYRQYASGRHLVNLRPSLRRLNAEYKGKKDAEARKEKLARE 90

Query: 417 -QLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEMRHAPFWGWIKDLAAAD--- 469
            +L K  +   + GC P L+Q+P+  A+Y+++      +E   AP  G    L + D   
Sbjct: 91  RELRKNSDYKMVDGCIPALIQVPLIIALYQLLLRIARPVEGIDAPHHG-FGSLTSEDVSH 149

Query: 470 ------------PTNIFTLFGILPFYLP-GFMHVGIWPIIMSLSMF------IQMKMSPP 510
                         +I     +         +     P+    ++F        MK +  
Sbjct: 150 FLDARLFDVPISSYHIMNANTLAELGTTRSSVFWLALPLATCAAVFTTANWAYTMKRNLQ 209

Query: 511 PADKGQ------AMILNWM-PVVFVF-----ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
             D           ++    P +F+F      L   P  +++YW  SN+ + +Q  +I +
Sbjct: 210 TVDHESFAARGFMKLMWVFGPFLFLFPLVFGLLGPAPIAILMYWVCSNLWTAMQTFIIQR 269

Query: 559 MHGAEIGLIDRLRSTFSKNYN 579
                +      R   ++   
Sbjct: 270 TLDKRVPYTTEFREYHAEQKQ 290


>gi|322385984|ref|ZP_08059624.1| SpoIIIJ family protein [Streptococcus cristatus ATCC 51100]
 gi|321269967|gb|EFX52887.1| SpoIIIJ family protein [Streptococcus cristatus ATCC 51100]
          Length = 337

 Score = 78.9 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 96/259 (37%), Gaps = 40/259 (15%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF----PLAKKQYVSTANMKNI 392
            W          +  +  N    +G+AI++ T+ V+L+ F      + K  + +  M   
Sbjct: 67  IWDVLGQPMADSIQFFAKNSGLGYGLAIIIVTLIVRLIIFPLGIYQSWKATLQSEKMNYF 126

Query: 393 QPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKV 446
           +P    ++E+   +  Q      Q+ ++   + + ++     GC P+L+Q+P F A++  
Sbjct: 127 KPIFAPIQERINNAETQEEKLEAQQELMAAQRENGLSMFGGIGCLPLLIQMPFFSALFFA 186

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
              +                        + F  +    P         +I+ +  +IQ  
Sbjct: 187 AQYT-------------------NGVASSTFLGINLGKPSL----ALTLIVGVLYYIQSV 223

Query: 507 MSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
           +S     D+ Q   +    +M P++ V      PA + +YW     I I+QQ +I   + 
Sbjct: 224 LSLHGIEDETQKAQMKSATYMSPIMIVVFSFMSPAAVTLYWVVGGFIQIIQQFIIN--YL 281

Query: 562 AEIGLIDRLRSTFSKNYNS 580
               +  ++   + KN   
Sbjct: 282 IRPRIRKQVAEEYEKNPPK 300


>gi|255719834|ref|XP_002556197.1| KLTH0H07304p [Lachancea thermotolerans]
 gi|238942163|emb|CAR30335.1| KLTH0H07304p [Lachancea thermotolerans]
          Length = 383

 Score = 78.9 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 96/269 (35%), Gaps = 24/269 (8%)

Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAK 380
           E    I     +     +++    +  +M   +   G      I+ TTV V+LL FPL  
Sbjct: 76  EASNHIGYLSSIGLAKSWWWPPDLIQNIMEQIHVYTGLPWWGTIVTTTVIVRLLMFPLYV 135

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-------AMIQLYKTHNINPLAGCWPI 433
           K   + A    I+P++D +  +   +   V  +        ++      N    A    +
Sbjct: 136 KSSDTIARNSKIKPELDAINSELMGTTDMVEAQRVALRRKKLMAENGIKNRYLAAPMLQV 195

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
            + +  F  I ++ +  ++        W +DL+ ADP       G+       F+     
Sbjct: 196 PVALGFFSGIRQMANYPVDGFTNQGLAWFQDLSLADPY-----LGLQVITASVFISFTRL 250

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
                   F                    MP++ + A  +  +G+++Y++ +   S++Q 
Sbjct: 251 GGETGAQQF----------SPAMKNFFTVMPLLSIPATMNLASGVVLYFAVNGACSVLQT 300

Query: 554 AVI-MKMHGAEIGLIDRLRSTFSKNYNSQ 581
            V+  K    ++ + D ++   S    ++
Sbjct: 301 LVLRNKWIRKKLDIADVVKRPASTTGPAK 329


>gi|254567207|ref|XP_002490714.1| Mitochondrial inner membrane insertase [Pichia pastoris GS115]
 gi|238030510|emb|CAY68434.1| Mitochondrial inner membrane insertase [Pichia pastoris GS115]
 gi|328351099|emb|CCA37499.1| Mitochondrial inner membrane protein OXA1 [Pichia pastoris CBS
           7435]
          Length = 376

 Score = 78.9 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 90/249 (36%), Gaps = 22/249 (8%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
              +++    +   + Y +   G      I+ TT+ ++++ FPL  K   + A     +P
Sbjct: 83  AQSWWWPPDVLERTLEYVHVYSGLPWWGTIVATTIAIRVVMFPLFVKSSDTMARSAKAKP 142

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNIN---PLAGCWPILLQIPV----FFAIYKVI 447
           ++DE  +  + +     ++    + K                 LQ P+    F A+  + 
Sbjct: 143 EMDECMKVIRDAQTVGERQKAALMRKQITAKYGIKYRYMMAPFLQFPIAIGFFTALRHMA 202

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
            + ++        W  DL+AADP     L     F     +           S F     
Sbjct: 203 LLPVDGFPTQGAYWFPDLSAADPYLGLQLISAATFMTSMKLGGE-----TGASNF----- 252

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
           SP      Q ++   +P + +    +  +G+++Y++ +   S VQ A++      +I  +
Sbjct: 253 SPG----TQKLLTYVLPTLSIPFTMNLSSGVVLYFATNAACSFVQSALLRNKVFRKIAGL 308

Query: 568 DRLRSTFSK 576
             +     K
Sbjct: 309 QEIVPRVKK 317


>gi|19114471|ref|NP_593559.1| mitochondrial inner membrane translocase Oxa101
           [Schizosaccharomyces pombe 972h-]
 gi|13124375|sp|O14300|OXA11_SCHPO RecName: Full=Mitochondrial inner membrane protein oxa1-1; AltName:
           Full=Cytochrome oxidase biogenesis protein 1-1;
           Short=Sp1; Flags: Precursor
 gi|2370552|emb|CAB11488.1| mitochondrial inner membrane translocase Oxa101
           [Schizosaccharomyces pombe]
 gi|2739283|emb|CAA63843.1| oxa1Sp1 [Schizosaccharomyces pombe]
          Length = 374

 Score = 78.9 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 92/235 (39%), Gaps = 36/235 (15%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           ++  A       +        + ++I+LTT+ V+L   P+    + ++  +  IQP++ +
Sbjct: 65  WWPYALIQNTAYTINVYAGAPWWVSIILTTLGVRLALTPVMIASFRNSTKLSVIQPEMKK 124

Query: 399 ----LREKFKQSPPQVLQKAMIQL---YKTHNINPLAGCWPILLQIPVFFAIYKVIS--- 448
               ++     +    L +  I L   Y  HN+NP A     L Q  VFF+ +  I    
Sbjct: 125 ELEAIKTAKLDNDQLALNQHSIALRGIYLKHNVNPFAIFILPLTQSAVFFSFFYAIRKMS 184

Query: 449 -ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
            +S++        W KDL+  DP                     I PII +  MF  M+M
Sbjct: 185 RLSVDGFTTGGLAWFKDLSIPDPYC-------------------ILPIINAGLMFSGMQM 225

Query: 508 SPPPADKGQAMILNWMPVVFV------FALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +            NW    F+         +  PA + +YW  S++ +IVQ  ++
Sbjct: 226 NRANTASTIGNSTNWRTFFFLCCLLSPLLTAKLPAAIFMYWIPSSLFNIVQGYIL 280


>gi|317500881|ref|ZP_07959093.1| hypothetical protein HMPREF1026_01036 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331089217|ref|ZP_08338119.1| hypothetical protein HMPREF1025_01702 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|316897761|gb|EFV19820.1| hypothetical protein HMPREF1026_01036 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330405769|gb|EGG85298.1| hypothetical protein HMPREF1025_01702 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 441

 Score = 78.9 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 12/102 (11%)

Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPP-----------PADKGQAMILNWMPVVFVFAL 531
            + G +   + P++  L+ FI +K+S             P       +   MP++ V   
Sbjct: 247 SIAGVIIAVLIPVLAGLTQFISVKLSQAGAGGAAMSDDNPMAASMKTMTYTMPLISVVFG 306

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
            + PAGL +YW  S  +  VQQ  + K    +  + D ++  
Sbjct: 307 FTLPAGLGLYWVASAAVRSVQQLAVNKYLSKK-SIDDIIKEN 347



 Score = 48.1 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 5/128 (3%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
           ++  I     + + + M  + +    + + N G+AI++ T+ V  L  PL  KQ   T  
Sbjct: 12  YDWPIIKQVSWLLGQVMNGIYNALSAIGIENIGVAIIVFTIIVYTLLLPLTIKQQKFTKM 71

Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
              +QP+I ++++++     Q      Q+ M  +Y  + +   +GC P LLQ+   F +Y
Sbjct: 72  SAVMQPEIQKIQKRYANKKDQASMLKQQEEMNMVYDKYGLKMSSGCLPSLLQLVFLFGLY 131

Query: 445 KVISISLE 452
            V+    E
Sbjct: 132 PVVQNIPE 139


>gi|325185413|emb|CCA19898.1| mitochondrial inner membrane protein OXA1 putative [Albugo
           laibachii Nc14]
          Length = 362

 Score = 78.9 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 36/212 (16%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-----QSPPQVLQKA 414
           +   I ++TV V+ +    + K   + A +K IQPK+++L+E+ +            Q+ 
Sbjct: 108 WWATIAVSTVIVRSVMIYPSIKGIRNAAKLKIIQPKLEKLKEEMEVGPRTPEKVIDFQRK 167

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL---EMRHAPFWGWIKDLAAADPT 471
              L   ++++   G +  L QIP+F   +  +       E        W  DL AADPT
Sbjct: 168 YKALMSANDVSIFRGLYVPLFQIPMFLGFFWGLRELPKYYESCKEGGALWFTDLGAADPT 227

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK------MSPPPADKGQAMI-LNWMP 524
                               I P++ +  M + ++      ++    DK    I +  M 
Sbjct: 228 Y-------------------ILPVLNAALMLVAVETGSEGGLNNDMRDKM--KIGMRCMS 266

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           V+ +     F  GL ++W  SN  S+ Q A++
Sbjct: 267 VLMIPFTMHFETGLFVFWIASNTCSLAQSAML 298


>gi|302672310|ref|YP_003832270.1| membrane insertion protein [Butyrivibrio proteoclasticus B316]
 gi|302396783|gb|ADL35688.1| membrane insertion protein [Butyrivibrio proteoclasticus B316]
          Length = 436

 Score = 78.9 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 17/119 (14%)

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK------------GQA 517
           P  +         +L  F  V + P++ + + ++  K+ P   D              Q 
Sbjct: 240 PMYMIQTAFANKNFLLFFGGVMV-PVLAAFTQWVNTKLMPQNTDPNAKLDPNDPAAQMQQ 298

Query: 518 MI--LNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
            +  +N M P++  F   S PAG+ +YW    VI  +QQ VI + H  +  +   +   
Sbjct: 299 SMKTMNIMMPLMSAFFCLSLPAGMGVYWIAGAVIRSIQQIVINR-HIDKTDIDAEIAKN 356



 Score = 48.1 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412
           + N G+AI++ T+ + L   PL  KQ   +     + P++  +++K+K          +Q
Sbjct: 37  IPNIGLAIIIFTIVIYLCLLPLTYKQQKFSKLQAKMSPELKAIQDKYKGKKDNDSMLAMQ 96

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
               +LY  + ++    C  +++Q+P+ FA+Y+VIS 
Sbjct: 97  AETKELYAKYGVSQTGSCLQLIIQMPILFALYRVISN 133


>gi|329767321|ref|ZP_08258846.1| hypothetical protein HMPREF0428_00543 [Gemella haemolysans M341]
 gi|328836010|gb|EGF85701.1| hypothetical protein HMPREF0428_00543 [Gemella haemolysans M341]
          Length = 295

 Score = 78.9 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 46/250 (18%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            ++    KPM + +S  +   G++G +I++ T+ ++LL  P     Y      +  Q   
Sbjct: 28  TFYEIFVKPMDLSLSKIHEYTGSWGWSIVIITLVIRLLVLPFMLNNYKVQNKSRKGQELA 87

Query: 397 DELREK----------------------FKQSPPQVLQKAMIQLYKTHNINPLA--GCWP 432
               E                         +S    LQ+  + + K ++  PL+  GC P
Sbjct: 88  RPELEVVQKKQKAAKEKEARAISNEEKMQARSELMELQREQMAIMKKYDAMPLSLGGCLP 147

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +L+ +P    ++  +S  L                       T  G+       +    I
Sbjct: 148 MLIPLPFLTGLFYTLSNPLYSAG---------------ITESTFLGVFNLGTRSYTLPII 192

Query: 493 WPIIMSLSMFIQMKMSPPPADK-------GQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
             I+ ++   + MK+ P P             M+    P++           + +Y+   
Sbjct: 193 AFIVYAIQTTLTMKLMPTPTQPGQEQMQSQMQMMQWLSPIMITVFSFLVAGAVAVYYIVG 252

Query: 546 NVISIVQQAV 555
            +  I Q  +
Sbjct: 253 GIFMIFQTYL 262


>gi|160946600|ref|ZP_02093803.1| hypothetical protein PEPMIC_00558 [Parvimonas micra ATCC 33270]
 gi|158446984|gb|EDP23979.1| hypothetical protein PEPMIC_00558 [Parvimonas micra ATCC 33270]
          Length = 233

 Score = 78.9 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 96/236 (40%), Gaps = 35/236 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F   +      FI + +  ++    + +    I+I++ ++  K++ FP+      +    
Sbjct: 3   FLRNLMGSVLKFIYEGVASILPNEPSSISYLAISIIIISIIFKVVLFPIFLSSIKNQKIQ 62

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
                +  ++REK+ +   Q +   +++  K H I  L GC P++  + +  A++ V+  
Sbjct: 63  AKFAKEQQKIREKY-KHDQQAMNLKLMEFNKEHGIKQLGGCLPMIFNLILVLAMFAVMRE 121

Query: 450 SL-------EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
            L              + WIKDL+A DP                   +   P+I +++ +
Sbjct: 122 PLLYIFGDANANVMKNFLWIKDLSAPDP------------------LLYGLPLINAVTQY 163

Query: 503 IQ-------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           I         K +P    K    +    P +   +  SF AGL +YW+ +N++ I+
Sbjct: 164 IYLDLSNRDQKDNP--GAKSMETMKYIFPFIIFISAKSFSAGLALYWAMTNIVEIL 217


>gi|24380099|ref|NP_722054.1| OxaA-like protein precursor [Streptococcus mutans UA159]
 gi|38503007|sp|Q8DSP8|OXAA2_STRMU RecName: Full=Membrane protein oxaA 2; Flags: Precursor
 gi|24378095|gb|AAN59360.1|AE015001_5 putative inner membrane protein [Streptococcus mutans UA159]
          Length = 310

 Score = 78.5 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 100/255 (39%), Gaps = 31/255 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN----MKN 391
           W + +F A    ++     NL   FG AI++ TV V+LL  PL   Q          M  
Sbjct: 37  WVYKFFAAPMGSVIQYLANNLGLGFGFAIIIVTVIVRLLILPLGLSQVRKMTYQSEKMAY 96

Query: 392 IQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLA--GCWPILLQIPVFFAIYK 445
           ++P  D ++E+ K +  Q  +      ++Q  + + ++     GC P+L+Q+P F A+Y 
Sbjct: 97  LKPVFDPIQERMKNAKTQEEKMAAQTELMQAQRHYGMSMFGGLGCLPLLIQMPFFSALYI 156

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  A                    F  +    P  +   I  I+  +  ++  
Sbjct: 157 STRYTKGIASAS-------------------FLGIKLGSPNMIITVIIGILYLVQSWVST 197

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
              P    +    ++  MP++ V      PAG  +YW  S +  ++QQ +    H  +  
Sbjct: 198 LSVPEAQRQQTRNMMFMMPIMMVMISIGAPAGGALYWLVSGIFGLIQQLITN--HIIKPK 255

Query: 566 LIDRLRSTFSKNYNS 580
           L  ++   F KN   
Sbjct: 256 LRKQIDEEFKKNPPK 270


>gi|169351635|ref|ZP_02868573.1| hypothetical protein CLOSPI_02416 [Clostridium spiroforme DSM 1552]
 gi|169291857|gb|EDS73990.1| hypothetical protein CLOSPI_02416 [Clostridium spiroforme DSM 1552]
          Length = 289

 Score = 78.5 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 109/243 (44%), Gaps = 28/243 (11%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + +    P+   + +    VGN  I ++  T+ V L+  P+  K  VST  ++ +QP+++
Sbjct: 55  FDFLFVIPIAKGILFINQYVGNVAIGVIGVTIVVNLITLPIMVKSTVSTQKIQLLQPEME 114

Query: 398 ELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           +++ K++    Q         +  LYK HN++ + G +   L +P+  A+++ +     +
Sbjct: 115 KIQNKYRGRKDQASQMRQNAEIQNLYKKHNVS-MFGSFATFLTLPIMIAMWQAVQRIDIL 173

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF-------IQMK 506
                +G   +L     ++I              +   +  ++++++ +       I  K
Sbjct: 174 YKTSLFG--INLGEKPISHIMEFS----------IEYIVLLLLVAVTQYFAVQISQIMAK 221

Query: 507 MSPP--PADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
            SP   P+ + Q M  + N M +  V+  ++ PA + +YW  +N+I IV+   I   H  
Sbjct: 222 RSPRYRPSQQMQTMNTMNNVMTLFIVYLAATMPAAMSLYWITTNIIGIVRTVYIQFFHIE 281

Query: 563 EIG 565
           ++ 
Sbjct: 282 KVK 284


>gi|281210233|gb|EFA84401.1| putative oxidase assembly protein [Polysphondylium pallidum PN500]
          Length = 388

 Score = 78.5 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 89/245 (36%), Gaps = 27/245 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
            F    +     +  N    + + I+  TV ++ +  P   K   S   M+ ++ ++++ 
Sbjct: 109 NFNNSIIESFNQFSVNTGIPWWLCIVGATVALRFVILPFTVKTQRSQVKMQKVREEMEKN 168

Query: 400 REKFKQSPPQVLQKA--MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS----LEM 453
                 +    ++ A    +L K H ++ L+     L Q P +   + ++  +     + 
Sbjct: 169 AHLNDGTMEGRMKMASLQSELSKKHGVSALSMMGLGLAQAPFYIYFFVLVRSACMDFPQY 228

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
                  W KDL+  DPT                    I P+  S      ++MS     
Sbjct: 229 VSNGGALWFKDLSVMDPTY-------------------ILPVASSFLQLQSVRMSFNETT 269

Query: 514 K-GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
                +I N +  V +F    F AGL +YW  ++++ ++Q  +  K +  +      +  
Sbjct: 270 PLIMKIIFNGLCFVPLFFTLKFAAGLNVYWCINSLLFVIQNYL-FKQNSVKKFFNIPIVE 328

Query: 573 TFSKN 577
             +K 
Sbjct: 329 ESAKK 333


>gi|238503221|ref|XP_002382844.1| mitochondrial export translocase Oxa1, putative [Aspergillus flavus
           NRRL3357]
 gi|220691654|gb|EED48002.1| mitochondrial export translocase Oxa1, putative [Aspergillus flavus
           NRRL3357]
          Length = 467

 Score = 78.5 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 111/311 (35%), Gaps = 40/311 (12%)

Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325
           ++  + +  ++  S  H    A+F++         +   T    A  ++   +  ++   
Sbjct: 19  NQSLAGNLSWRPASSIHHASAARFNSTASAASASTATAATAVETAAPEQASDLSDFDITA 78

Query: 326 AIPRFEMLIDW--GWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQ 382
              +   L D    + +  +  +   + +F+   G    A I+ T + V+L         
Sbjct: 79  IPEKIGYLKDLGLDYGWGPSSMIEYFIEHFHIWAGLPWWASIVGTGLLVRLALLKPMLSA 138

Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILL 435
              +  + N++  +  LR K  Q+  +     M+Q       L+  H I          +
Sbjct: 139 ADVSTKIHNLKDVVAPLRAKMAQAANEKRHADMMQTRAELQQLHSDHGIK-FYKTMIPFI 197

Query: 436 QIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491
           Q+P+ F  Y+V+     +      A   GWIKDL  ADP                     
Sbjct: 198 QLPLGFGCYRVVKGMTSLPVPGLAAESVGWIKDLTVADPYF------------------- 238

Query: 492 IWPIIMSLSMFIQMK------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
           + P   + +M++  K      M+          +L  MP      +S FP+ L +Y+  +
Sbjct: 239 LLPAATAFAMYMSFKKGGENGMNQMANSPVGRAVLYGMPAFSFAFMSFFPSALQLYFLST 298

Query: 546 NVISIVQQAVI 556
            + ++ Q  ++
Sbjct: 299 GLFALGQAYML 309


>gi|83771459|dbj|BAE61591.1| unnamed protein product [Aspergillus oryzae]
          Length = 467

 Score = 78.1 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 111/311 (35%), Gaps = 40/311 (12%)

Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325
           ++  + +  ++  S  H    A+F++         +   T    A  ++   +  ++   
Sbjct: 19  NQSLAGNLSWRPASSIHHASAARFNSTASAASASTATAATAVETAAPEQASDLSDFDITA 78

Query: 326 AIPRFEMLIDW--GWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQ 382
              +   L D    + +  +  +   + +F+   G    A I+ T + V+L         
Sbjct: 79  IPEKIGYLKDLGLDYGWGPSSMIEYFIEHFHIWAGLPWWASIVGTGLLVRLALLKPMLSA 138

Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILL 435
              +  + N++  +  LR K  Q+  +     M+Q       L+  H I          +
Sbjct: 139 ADVSTKIHNLKDVVAPLRAKMAQAANEKRHADMMQTRAELQQLHSDHGIK-FYKTMIPFI 197

Query: 436 QIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491
           Q+P+ F  Y+V+     +      A   GWIKDL  ADP                     
Sbjct: 198 QLPLGFGCYRVVKGMTSLPVPGLAAESVGWIKDLTVADPYF------------------- 238

Query: 492 IWPIIMSLSMFIQMK------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
           + P   + +M++  K      M+          +L  MP      +S FP+ L +Y+  +
Sbjct: 239 LLPAATAFAMYMSFKKGGENGMNQMANSPVGRAVLYGMPAFSFAFMSFFPSALQLYFLST 298

Query: 546 NVISIVQQAVI 556
            + ++ Q  ++
Sbjct: 299 GLFALGQAYML 309


>gi|289619151|emb|CBI54419.1| unnamed protein product [Sordaria macrospora]
          Length = 460

 Score = 78.1 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 74/243 (30%), Gaps = 39/243 (16%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML-TTVFVKLLFFPLAKKQYVSTA 387
            F   +   + + +   M  L  + Y   G    A +      V++  F  +      + 
Sbjct: 116 GFLKTLGLDYGWGVTSMMQWLTEHVYVYSGLPWWATLAAVAAIVRISIFKPSLNSSQESQ 175

Query: 388 NMK------NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQI 437
            M+           + +++E    +  Q      +  M  + K   IN     +   +Q+
Sbjct: 176 KMQDLNKDPRYAAIMAKVKEASWDTSKQNDLMKYRAEMANMTKAAGINYFK-VFIPFVQV 234

Query: 438 PVFFAIYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           P+ F ++++I       +E        W  DL  ADP                       
Sbjct: 235 PIGFGMFRLIRGMAALPVESMETGGTLWFPDLTVADPYF-------------------AL 275

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS----SFPAGLIIYWSWSNVIS 549
           PI  +      M+   P     Q  ++  M VV V          PA L  Y+  S +  
Sbjct: 276 PIASACLFVASMRKPIPYMAPQQGRMMKSMAVVLVPISIFATAWLPAALQWYFLVSAIGQ 335

Query: 550 IVQ 552
             Q
Sbjct: 336 YFQ 338


>gi|239624140|ref|ZP_04667171.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520526|gb|EEQ60392.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 440

 Score = 78.1 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/345 (13%), Positives = 98/345 (28%), Gaps = 28/345 (8%)

Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL--PGKSITTTNFLFAGAKEFPT 317
              +I      F S F   + G            + I     +  ++        +    
Sbjct: 23  ILGWIMDWLFKFTSFFGIENIGLCIILFTLVTKVLMIPLTIKQQQSSKLMAVMQPEISAI 82

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
              Y+      ++ M++         K    +      L+    I   L  V   +  + 
Sbjct: 83  QKKYKGKENDQKYAMMMQTEIKAVYEKYGTSMTGGCLPLLIQMPIIFALYRVIYNIPAYV 142

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL-- 435
            + + Y        I       +     +     QK  I  +   N+N +          
Sbjct: 143 QSVRGY----YETIISKLPSGYQTAQAFTDLAAAQKMPIDKFDYTNVNTVIDLLYKFTGQ 198

Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY---------LPG 486
           Q       +  +  ++          I+++      NI      +            L  
Sbjct: 199 QWDTLVTSFASVGQAVTDTGVRVVDAIENMQTFFGLNIAYTPFQVIMNYFNKVEGTTLLT 258

Query: 487 FMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPA 536
            +     P+   LS +   K+             PA      +   MP++ VF   SF +
Sbjct: 259 AIAALCIPLFAGLSQWYSTKLMTANQPQTNSDENPAAGMMKSMNVTMPLMSVFFCFSFAS 318

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           G+ +YW   +V +I+QQ  I   +  ++ + D ++    K    +
Sbjct: 319 GIGLYWVAQSVFTIIQQVGIN-SYLNKVNIDDLVQKNIDKTNKKR 362


>gi|261884238|ref|ZP_06008277.1| putative inner membrane protein translocase component YidC
           [Campylobacter fetus subsp. venerealis str. Azul-94]
          Length = 67

 Score = 78.1 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 32/54 (59%)

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
            D  Q  I+ ++P++F F   +FPAGL +YW  +N+ S+ QQ V+ K+   +  
Sbjct: 4   TDPMQEKIMKFLPLIFTFFFVTFPAGLTLYWFINNLCSVAQQLVVNKIFKKQKE 57


>gi|290579922|ref|YP_003484314.1| putative inner membrane protein [Streptococcus mutans NN2025]
 gi|254996821|dbj|BAH87422.1| putative inner membrane protein [Streptococcus mutans NN2025]
          Length = 284

 Score = 78.1 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 100/255 (39%), Gaps = 31/255 (12%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN----MKN 391
           W + +F A    ++     NL   FG AI++ TV V+LL  PL   Q          M  
Sbjct: 11  WVYKFFAAPMGSVIQYLANNLGLGFGFAIIIVTVIVRLLILPLGLSQVRKMTYQSEKMAY 70

Query: 392 IQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLA--GCWPILLQIPVFFAIYK 445
           ++P  D ++E+ K +  Q  +      ++Q  + + ++     GC P+L+Q+P F A+Y 
Sbjct: 71  LKPVFDPIQERMKNAKTQEEKMAAQTELMQAQRHYGMSMFGGLGCLPLLIQMPFFSALYI 130

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +  A                    F  +    P  +   I  I+  +  ++  
Sbjct: 131 STRYTKGIASAS-------------------FLGIKLGSPNMIITVIIGILYLVQSWVST 171

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
              P    +    ++  MP++ V      PAG  +YW  S +  ++QQ +    H  +  
Sbjct: 172 LSVPEAQRQQTRNMMFMMPIMMVMISIGAPAGGALYWLVSGIFGLIQQLITN--HIIKPK 229

Query: 566 LIDRLRSTFSKNYNS 580
           L  ++   F KN   
Sbjct: 230 LRKQIDEEFKKNPPK 244


>gi|104774337|ref|YP_619317.1| hypothetical protein Ldb1491 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116514432|ref|YP_813338.1| preprotein translocase subunit YidC [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|103423418|emb|CAI98291.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|116093747|gb|ABJ58900.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|325126132|gb|ADY85462.1| Membrane protein oxaA 2 [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 320

 Score = 77.7 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 95/268 (35%), Gaps = 39/268 (14%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYV 384
                G +Y+I + + + + +    + +        G AI++ T+ V+++  PL   Q  
Sbjct: 35  KAPTSGPYYWIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLVVRVILMPLMLSQQH 94

Query: 385 STANMKNIQPKIDELREK---------FKQSPPQVLQKAMIQLYKTHNINPL--AGCWPI 433
                +     +    +                  L     ++Y  +N++     GC P+
Sbjct: 95  KATLQQEKMHLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPL 154

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           L+Q+P+   IY+ ++ S  +  + F+G                   +       +   I 
Sbjct: 155 LIQMPIMIGIYQAVAYSNALAKSTFFG-------------------ISLSSKSMVLAIIA 195

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            +   +  ++ M   P    K     +   P++ +F   SF   L +YW+  N++ ++QQ
Sbjct: 196 TVFALIQSYVAMIGIPEEQKKTMQATMLMNPIMTLFFSMSFSGTLALYWAVGNLVMVIQQ 255

Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            +       +     R+    + +   +
Sbjct: 256 LITT--FIVQPRAKKRVSKELADSPIVE 281


>gi|16904212|gb|AAL30813.1|AF435863_1 mitochondrial export translocase Oxa1 [Neurospora crassa]
          Length = 462

 Score = 77.7 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 73/243 (30%), Gaps = 39/243 (16%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL-----LFFPLAKKQY 383
            F   +   + + +   M  L  + Y   G    A +     +            +++  
Sbjct: 118 GFLKTLGLDYGWGVTSMMQWLTEHVYVYSGLPWWATLAAVAAIVRVAIFKPSLGASQESQ 177

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQV------LQKAMIQLYKTHNINPLAGCWPILLQI 437
                 KN +      + K               ++ M  + K   IN     +   +Q+
Sbjct: 178 KMQDLNKNPKYAAIMAKVKEASFDTTKQNDLVKYRQEMALMTKNAGINYFK-VFIPFIQV 236

Query: 438 PVFFAIYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           P+ F ++++I       +E        W  DL  ADP                       
Sbjct: 237 PIGFGMFRLIRGMAALPVESLETGGTLWFPDLTVADPYF-------------------AL 277

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV----FALSSFPAGLIIYWSWSNVIS 549
           PI  +      M+   P     QA ++  M +V V    FA +  PA L  Y+  S +  
Sbjct: 278 PIASACLFVASMRKPIPYMAPQQARMMKSMGLVLVPVSIFATAWLPAALQWYFLVSAIGQ 337

Query: 550 IVQ 552
             Q
Sbjct: 338 YFQ 340


>gi|308504846|ref|XP_003114606.1| hypothetical protein CRE_28281 [Caenorhabditis remanei]
 gi|308258788|gb|EFP02741.1| hypothetical protein CRE_28281 [Caenorhabditis remanei]
          Length = 368

 Score = 77.7 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 85/244 (34%), Gaps = 37/244 (15%)

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
                E L  W W+   +   + L     +L   + + I+  T+ ++ L   +       
Sbjct: 74  GESVLEELGLWSWWKPSSYFRWALEGMHVHLDLPWWLTIVAATLTLRALLVGVPVMSQKL 133

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMI-------QLYKTHNINPLAGCWPILLQIP 438
            A     + +++E R++  ++  +  Q              ++ +I        +     
Sbjct: 134 VAKQSMYRKEMNEFRDRIDEARKENNQLLQQQILLEQRDFLRSKDIRLGRQFLVMAANGA 193

Query: 439 VF----FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           VF    FAI K+I+++          W  DL A DP                       P
Sbjct: 194 VFATQFFAIKKMIAVNYPGLSTGGILWFTDLTATDPYY-------------------ALP 234

Query: 495 IIMSLSMFIQMKM------SPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNV 547
            I + +M +  K+      S           +++ +PVV     S F  GL +YW+ SN 
Sbjct: 235 FISAATMALVTKVGIEMGTSADQMPPIMRAFMSYGLPVVIFGVSSQFATGLCVYWTASNA 294

Query: 548 ISIV 551
           +S++
Sbjct: 295 VSLI 298


>gi|290960105|ref|YP_003491287.1| membrane-protein-insertion protein [Streptomyces scabiei 87.22]
 gi|260649631|emb|CBG72746.1| putative membrane-protein-insertion protein [Streptomyces scabiei
           87.22]
          Length = 279

 Score = 77.7 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 24/212 (11%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
              AI+L T  V+LL  PL++           +QP+I ELR+K  ++P + LQKAM++L+
Sbjct: 24  TAFAIILFTALVRLLVHPLSRAAARGQRARVALQPQIAELRKKHAKNPEK-LQKAMMELH 82

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA--DPTNIFTLF 477
               ++PL+GC P L Q+P FF +Y + S       A      K  AA   D  +     
Sbjct: 83  TKEKVSPLSGCLPSLCQLPAFFLLYHLFSNRTIGGEANALLTHKLFAAPLGDRWHDALGE 142

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMF---IQMKM-------SPPPAD---KGQAMIL---- 520
           G L F   G +++G++ I+  ++ F      +M        P  +D    G A  +    
Sbjct: 143 GGL-FGPQGLVYLGLFVIVAGVATFNFRRTKRMMAAGTAGMPAVSDDQVPGMAASMGAVS 201

Query: 521 NWMPVVFVFALSS---FPAGLIIYWSWSNVIS 549
            +MP +  F L S    P    +Y   S   S
Sbjct: 202 KFMPFMSFFTLLSVAVVPLAAALYVVTSTTWS 233


>gi|325265447|ref|ZP_08132170.1| membrane protein insertase, YidC/Oxa1 family [Clostridium sp. D5]
 gi|324029305|gb|EGB90597.1| membrane protein insertase, YidC/Oxa1 family [Clostridium sp. D5]
          Length = 429

 Score = 77.7 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 7/89 (7%)

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQ-----AMILNW-MPVVFVFALSSF 534
           F + G +   I PI+  L+ F+ +K+ P P  D           + + MP+  VF   + 
Sbjct: 247 FSIIGIILAVIIPIMAGLTQFLSVKLQPQPQVDPSNTMANSMKTMTYTMPLFSVFMGFTL 306

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           PAGL +YW+ S ++  VQQ  I K  G +
Sbjct: 307 PAGLGLYWAISALVRCVQQLAINKYLGKK 335



 Score = 55.8 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 4/97 (4%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412
           + N GI I+L T+ +  L  PL  KQ   +     + P+I ++++K+     Q      Q
Sbjct: 39  IQNIGICIILFTIVIYTLMIPLTIKQQKWSKMSSVMNPEIQKIQKKYANKKDQASMLKQQ 98

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + M  +Y+ +  +P  GC P+L+Q+PV FA+Y VI  
Sbjct: 99  EEMQAIYEKYGTSPTGGCLPMLIQMPVLFALYPVIQN 135


>gi|302657900|ref|XP_003020661.1| mitochondrial export translocase Oxa1, putative [Trichophyton
           verrucosum HKI 0517]
 gi|291184517|gb|EFE40043.1| mitochondrial export translocase Oxa1, putative [Trichophyton
           verrucosum HKI 0517]
          Length = 468

 Score = 77.3 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 84/244 (34%), Gaps = 38/244 (15%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390
             +   + +  +  +  L+   +   G       + T V ++++ F         +  +K
Sbjct: 107 KELGLDYGWGPSSMVQFLLETLHITGGLPWWTATVATAVLIRVVLFNSIVSSAEVSTKLK 166

Query: 391 NIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            ++P+   +RE+      +         +  +  L + H I P       LLQIP+ F  
Sbjct: 167 ALKPRTTPIRERVMHCVRENDNVGALKAKNELALLNQEHGIKPWKAFL-PLLQIPLGFGC 225

Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           ++V+     +           W++D+   DP                       P     
Sbjct: 226 FRVLRGMSALPVPGLDNESVLWLQDVTMPDPYY-------------------ALPFATGA 266

Query: 500 SMFIQMKMSPPP-----ADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            MF+ ++           +     I+ + +P+V    ++ +P  L +Y+  +  +S+ Q 
Sbjct: 267 LMFVALRRGGDTGLSNLMNSTLGKIMVYSLPIVTALTMTFWPGILQLYFLTTGALSVCQT 326

Query: 554 AVIM 557
            ++ 
Sbjct: 327 YIMT 330


>gi|212704003|ref|ZP_03312131.1| hypothetical protein DESPIG_02056 [Desulfovibrio piger ATCC 29098]
 gi|212672508|gb|EEB32991.1| hypothetical protein DESPIG_02056 [Desulfovibrio piger ATCC 29098]
          Length = 846

 Score = 77.3 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 25/214 (11%)

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
               +         N+G++I++ +    + F PL +    + A  K +Q  +     + +
Sbjct: 15  IYRAIYLGSLQFTHNYGLSILVLSCISAVAFIPLGRLAVGTQAREKKLQMIMAPQLARIR 74

Query: 405 QSPPQVLQKAMIQ-LYKTHNINPL---AGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
           +      ++  I  LYK +  +PL      + + LQIP     Y +I    +++  P   
Sbjct: 75  KESKGAERQRRINNLYKRYAYHPLLAVRSAFGVALQIPFLTGAYYMILGLTQLQGQP-CL 133

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAM 518
            I DL+  D                    V   PI+M++   I    +P     D  QA+
Sbjct: 134 MIPDLSQPD---------------GLLWGVNALPIVMTVVNIIATLTTPGLTRKDTLQAI 178

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           I+ +    F+  L +  + L+I+W+ +NV  ++Q
Sbjct: 179 IIAF---FFLALLYNAASALLIFWTMNNVFFLLQ 209


>gi|308190321|ref|YP_003923252.1| inner membrane protein translocase component [Mycoplasma fermentans
           JER]
 gi|307625063|gb|ADN69368.1| inner membrane protein translocase component [Mycoplasma fermentans
           JER]
          Length = 605

 Score = 77.3 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 98/249 (39%), Gaps = 36/249 (14%)

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           P F + +    +   +    M     ++ +    IA+++T +    + +     Q     
Sbjct: 355 PFFGLFVHPIAWLTGSMRENMPSLAGWSTIFVIIIAVVITRLLALAITWKSQVNQSKQED 414

Query: 388 NMKNIQPKIDELRE-KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
                     +  + K  +      Q+ +  LYK +NINPL     I++  P+F A+++V
Sbjct: 415 IKAKKAKIDAKYADFKGNKQMKIRHQQEIAALYKKNNINPLDAFLNIIISFPIFIAMWRV 474

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM- 505
           I    EM+   + G   D AA   T+   LF         + ++GI  + +++  F    
Sbjct: 475 IQSIPEMKSTHWLG--MDFAA---TSWKRLF------AGEWAYLGILVVALAV-QFFSQF 522

Query: 506 ------------------KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
                             + +   ++K Q +I+    +VF+F    F  G+ +YW +S +
Sbjct: 523 TPRLLNRKKFKERTTIEEEKALKKSNKTQNIIM----IVFLFITLMFSCGVQVYWIFSGL 578

Query: 548 ISIVQQAVI 556
            +I+Q   I
Sbjct: 579 WNIIQTISI 587


>gi|224541285|ref|ZP_03681824.1| hypothetical protein CATMIT_00445 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525789|gb|EEF94894.1| hypothetical protein CATMIT_00445 [Catenibacterium mitsuokai DSM
           15897]
          Length = 293

 Score = 77.3 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 28/235 (11%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           + + +  P+   +    +  GN    ++L T+ + L+  P+  K  +ST  M+ +QP+++
Sbjct: 55  FDFILTIPIAKGILLITSWTGNVLWGVILMTILINLIILPVMIKSTISTQKMQMLQPEME 114

Query: 398 ELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
            ++ K++    Q     +Q  ++ LYK +N++ + G     L +P+ FA+Y  +     +
Sbjct: 115 RIQNKYRGKNDQTSQMRMQNEIMNLYKKNNVS-MFGSLWTFLTLPIMFAMYGAVQRIQIL 173

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---- 509
             +  +G    L              L     G     +  ++M+LS F  ++++     
Sbjct: 174 YTSQAFGMNLGLT------------PLSQITSGKFIYIVVILVMALSQFFAIEINNLMLK 221

Query: 510 ------PPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
                 P A + Q   +N  M ++ ++     P  +  YW  +N+I++V+   I 
Sbjct: 222 RNKKYKPSAQQNQMKTMNIVMTLMIIYFGLIMPTAMSFYWITTNLITVVRTVFIQ 276


>gi|319777717|ref|YP_004137368.1| hypothetical protein MfeM64YM_0996 [Mycoplasma fermentans M64]
 gi|318038792|gb|ADV34991.1| Conserved Hypothetical Protein [Mycoplasma fermentans M64]
          Length = 605

 Score = 77.3 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 98/249 (39%), Gaps = 36/249 (14%)

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           P F + +    +   +    M     ++ +    IA+++T +    + +     Q     
Sbjct: 355 PFFGLFVHPIAWLTGSMRENMPSLAGWSTIFVIIIAVVITRLLALAITWKSQVNQSKQED 414

Query: 388 NMKNIQPKIDELRE-KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
                     +  + K  +      Q+ +  LYK +NINPL     I++  P+F A+++V
Sbjct: 415 IKAKKAKIDAKYADFKGNKQMKIRHQQEIAALYKKNNINPLDAFLNIIISFPIFIAMWRV 474

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM- 505
           I    EM+   + G   D AA   T+   LF         + ++GI  + +++  F    
Sbjct: 475 IQSIPEMKSTHWLG--MDFAA---TSWKRLF------AGEWAYLGILVVALAV-QFFSQF 522

Query: 506 ------------------KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
                             + +   ++K Q +I+    +VF+F    F  G+ +YW +S +
Sbjct: 523 TPRLLNRKKFKERTTIEEEKALKKSNKTQNIIM----IVFLFITLMFSCGVQVYWIFSGL 578

Query: 548 ISIVQQAVI 556
            +I+Q   I
Sbjct: 579 WNIIQTISI 587


>gi|225575686|ref|ZP_03784296.1| hypothetical protein RUMHYD_03779 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037090|gb|EEG47336.1| hypothetical protein RUMHYD_03779 [Blautia hydrogenotrophica DSM
           10507]
          Length = 429

 Score = 77.3 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 14/153 (9%)

Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           F     VI  +           + ++A    T I + FG   + +       + P++  L
Sbjct: 210 FAGFSDVIQSTASSLSDMQIFGVLNIADQPLTIIKSAFGSGSWLV--LAAAVLVPLLAWL 267

Query: 500 SMFIQMKMSPPPADK-----------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
           + ++  ++ P  +                 +   MPV       + P G+ IYW    VI
Sbjct: 268 TQWLNFRLMPTASQNNNNNKDNPMMNSMKTMNTIMPVFSAVMCLTLPVGIGIYWISGAVI 327

Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             VQQ +I +    +I +   +     K    +
Sbjct: 328 RSVQQVIINRHMS-KIDMQVLIEENMKKAEKKR 359



 Score = 53.1 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 61/116 (52%), Gaps = 5/116 (4%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
               +I   +F +++  +  + N G+ I++ T+ + LL  PL  KQ   +     +QP+I
Sbjct: 19  SVLGWIMDGIFKVLNSMFG-IENIGLCIIIFTILMYLLMTPLQIKQQKFSKLSAVMQPEI 77

Query: 397 DELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
            ++++K++    Q+  + M +    +Y+ + ++P   C  + +Q P+  A+++VI 
Sbjct: 78  TKIQKKYQGKRDQISMQKMQEETSLVYQKYGVSPTGSCVQLAIQFPILMALWQVIY 133


>gi|154503054|ref|ZP_02040114.1| hypothetical protein RUMGNA_00876 [Ruminococcus gnavus ATCC 29149]
 gi|153796295|gb|EDN78715.1| hypothetical protein RUMGNA_00876 [Ruminococcus gnavus ATCC 29149]
          Length = 432

 Score = 77.3 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 11/109 (10%)

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-------PADKG---QAMILNWM 523
             +  +  F + G +   I PI+  L+ FI +K+          P +        +   M
Sbjct: 239 MLMDALKDFSIVGIILAVIIPIMAGLTQFISVKLMQQQQTTTIDPDNPMARSMNSMNYIM 298

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           P+  VF   + PAGL +YW+ S ++  VQQ  I K    +  + + +  
Sbjct: 299 PLFSVFMGFTLPAGLGLYWAISAIVRCVQQMAINKYLSKK-SVEEMIEE 346



 Score = 45.8 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 9/126 (7%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
             DW     IA     LM   YN      + N GI I+L T+ +  L  PL  KQ   + 
Sbjct: 10  AADWPIVGQIAWVFGKLMDAIYNFLNLFGIQNIGICIILFTIIIYTLMIPLTIKQQKFSK 69

Query: 388 NMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
               + P+I +L++K+     Q     +Q+    +Y+ +  +P  GC P+++Q+P+ FA+
Sbjct: 70  MQSVMMPEIQKLQKKYAGKRDQASMLKMQEEQQLIYEKYGSSPTGGCLPMVIQLPILFAL 129

Query: 444 YKVISI 449
           Y VI  
Sbjct: 130 YPVIQE 135


>gi|15225991|ref|NP_182170.1| OXA1L (INNER MEMBRANE PROTEIN OXA1-LIKE) [Arabidopsis thaliana]
 gi|38372506|sp|Q9SKD3|OXA1L_ARATH RecName: Full=Mitochondrial inner membrane protein OXA1-like;
           Flags: Precursor
 gi|4559387|gb|AAD23047.1| putative cytochrome oxidase biogenesis protein [Arabidopsis
           thaliana]
 gi|19347873|gb|AAL85994.1| putative cytochrome oxidase biogenesis protein [Arabidopsis
           thaliana]
 gi|24030491|gb|AAN41393.1| putative cytochrome oxidase biogenesis protein [Arabidopsis
           thaliana]
 gi|26450688|dbj|BAC42453.1| putative cytochrome oxidase biogenesis protein [Arabidopsis
           thaliana]
 gi|330255608|gb|AEC10702.1| inner membrane OXA1-like protein [Arabidopsis thaliana]
          Length = 431

 Score = 77.3 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 90/235 (38%), Gaps = 32/235 (13%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           E+ I      F    +  L+   ++  G N+  +I LTTV ++ +  P+   Q  +T  +
Sbjct: 125 EVAIAAADSAFPVAALQHLIDAVHSFTGLNWWASIALTTVLIRGVTIPILLNQLKATYKL 184

Query: 390 KNIQPKIDELRE----KFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIY 444
             ++P+++ELR+    K +        +  +QL +K H + P      +++Q P+F + +
Sbjct: 185 NVLRPQLEELRQEMSTKAQDPEAMAEGQRRMQLLFKEHGVTPFTPLKGLIIQGPIFISFF 244

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-YLPGFMHVGIWPIIMSLSMFI 503
             I    E                     F   G L F  L       I P++ +++  I
Sbjct: 245 FAIRNMAE-----------------KVPSFKTGGTLWFTDLTTTDTTYILPLLTAVTFLI 287

Query: 504 QMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAG----LIIYWSWSNVISIV 551
            ++ +       +   A  +     +  F       G    L  YW  SN+ ++V
Sbjct: 288 MVESNMQEGLEGNPV-AGTMKKFSRIIAFLSIPVLIGIEKALFCYWLTSNLFTLV 341


>gi|238926050|ref|YP_002939568.1| stage III sporulation protein J [Eubacterium rectale ATCC 33656]
 gi|238877727|gb|ACR77434.1| stage III sporulation protein J [Eubacterium rectale ATCC 33656]
          Length = 442

 Score = 77.3 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 11/127 (8%)

Query: 443 IYKVISISLEMRHAP--FWGWIKDLAAADP--TNIFTLFGILPFYLPGFMHVGIW-PIIM 497
            +  I  ++E  H     + +   L  +D     I + F   P     F+ + +  P++ 
Sbjct: 225 FFDGIQSAVEKTHDALLHFNYFLGLNISDTPWYIIKSNFTDKPDKWLLFVILALLIPVLS 284

Query: 498 SLSMFIQMKMSPPPA---DKG--QAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
            L+  I +K+ P      D+   Q  ++   MP++      + P GL IYW  S ++  +
Sbjct: 285 YLTQMINIKLMPQATNGNDQMASQMKMMNLMMPLMSFVICFTVPVGLGIYWICSALVRGI 344

Query: 552 QQAVIMK 558
           QQ  + +
Sbjct: 345 QQFFVNR 351



 Score = 52.3 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
                + +     V +  ++I++ T+ + +   PL  KQ   +   + +QP++  ++ K+
Sbjct: 31  WIYSGISNITGGRVESVVLSIVIITIIIYMCLLPLTIKQQKFSKLSQKMQPEMQAIQAKY 90

Query: 404 KQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           K    Q    AM +    LY+ + I+P+  C  +L+Q+P+ FA+Y+V   
Sbjct: 91  KNKKDQASMMAMQEETQLLYQKYGISPMGSCVQMLIQMPILFALYRVFYN 140


>gi|185178696|ref|ZP_02964517.1| membrane protein OxaA [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|184209286|gb|EDU06329.1| membrane protein OxaA [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
          Length = 383

 Score = 77.0 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 117/261 (44%), Gaps = 23/261 (8%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFY-FIAKPMFMLMSYFYNLVGNFGIAI------MLTTVF 370
           + +       P  +   D+G FY     P+  ++ +F     ++   +      ++  + 
Sbjct: 99  LIYSGTGPWYPMSDFSFDYGPFYALFVWPIAQILLHFMYATRDWPAGLNAILGLIIILLI 158

Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINP 426
           ++++   ++ +  + T  +  IQ KI E+  K+K +      Q  Q    +LY+ HN+ P
Sbjct: 159 IRVITMLISARATIQTERISEIQGKIAEINAKYKDAKDMQSRQKKQMETKELYQKHNVKP 218

Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486
           LA    +++ +P+F  IY+V++I   ++      +I DL+A   + IF+ F    +    
Sbjct: 219 LAPFESMIITLPIFLIIYRVVTILRPLKFIS-IFYIWDLSATPISEIFSNFTTSGWPYIF 277

Query: 487 FMHVGIWPIIMS--LSMFIQMKMSPPPA-----DKGQ----AMILNWMPVVFVFALSSFP 535
           F+ + I   I+S  +   +  K +         +K Q     M  N + +V    ++   
Sbjct: 278 FLLIIIPVQILSQKIPQLLAKKQNRSATTVGAKNKQQLKRVRMTQNIIAIVLAVVVAISA 337

Query: 536 AGLIIYWSWSNVISIVQQAVI 556
           +G+ +YW ++ + +I+Q  +I
Sbjct: 338 SGIGLYWFFNAIFTILQSYII 358


>gi|227505680|ref|ZP_03935729.1| inner membrane protein translocase component YidC [Corynebacterium
           striatum ATCC 6940]
 gi|227197648|gb|EEI77696.1| inner membrane protein translocase component YidC [Corynebacterium
           striatum ATCC 6940]
          Length = 322

 Score = 77.0 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 98/262 (37%), Gaps = 27/262 (10%)

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ- 405
            +L + F +    + +AI+   + V+    PL      S      ++P+ + ++ +    
Sbjct: 17  HLLFASFLDESMAWLVAIVFLVLTVRSFIAPLNWLSVRSGRISALMRPEANAIKARLDAA 76

Query: 406 ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
                     +   +L++ +  NPL GC P+ + +P F  +Y+V+  +  +      G +
Sbjct: 77  TTVEEAVAALQDQKELHERYKYNPLVGCLPVFIIVPFFLGLYQVVLRASRIGQVDHVGLL 136

Query: 463 K--DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS---MFIQMK---MSPPPADK 514
              D+ +     +  +           + V I  + +  +   M I      ++    +K
Sbjct: 137 TPGDVTSFRAALLNGVPITDFARDHRDLVVPILVLAIGFTILNMIITQYRSFLTLQFDEK 196

Query: 515 GQAMILNW-------MPVV--FVFALSSFPAGLIIYWSWSNVISIVQQ----AVIMKMHG 561
               +  +       MP +          P  +I YW+W+ + ++VQ      ++ + + 
Sbjct: 197 VPRRMFWFMFSMIILMPWILWSAAMSGPIPVAIIFYWAWTYLYTLVQTLVYEYIMYRRYP 256

Query: 562 AEIGLIDRLRSTFS--KNYNSQ 581
               +    R +F   +N +++
Sbjct: 257 LTDAVTQLRRDSFRAWRNKDTK 278


>gi|291529192|emb|CBK94778.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
           [Eubacterium rectale M104/1]
          Length = 438

 Score = 77.0 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 11/127 (8%)

Query: 443 IYKVISISLEMRHAP--FWGWIKDLAAADP--TNIFTLFGILPFYLPGFMHVGIW-PIIM 497
            +  I  ++E  H     + +   L  +D     I + F   P     F+ + +  P++ 
Sbjct: 221 FFDGIQSAVEKTHDALLHFNYFLGLNISDTPWYIIKSNFTDKPDKWLLFVILALLIPVLS 280

Query: 498 SLSMFIQMKMSPPPA---DKG--QAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
            L+  I +K+ P      D+   Q  ++   MP++      + P GL IYW  S ++  +
Sbjct: 281 YLTQMINIKLMPQATNGNDQMASQMKMMNLMMPLMSFVICFTVPVGLGIYWICSALVRGI 340

Query: 552 QQAVIMK 558
           QQ  + +
Sbjct: 341 QQFFVNR 347



 Score = 52.3 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
                + +     V +  ++I++ T+ + +   PL  KQ   +   + +QP++  ++ K+
Sbjct: 27  WIYSGISNITGGRVESVVLSIVIITIIIYMCLLPLTIKQQKFSKLSQKMQPEMQAIQAKY 86

Query: 404 KQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           K    Q    AM +    LY+ + I+P+  C  +L+Q+P+ FA+Y+V   
Sbjct: 87  KNKKDQASMMAMQEETQLLYQKYGISPMGSCVQMLIQMPILFALYRVFYN 136


>gi|225376872|ref|ZP_03754093.1| hypothetical protein ROSEINA2194_02514 [Roseburia inulinivorans DSM
           16841]
 gi|225211193|gb|EEG93547.1| hypothetical protein ROSEINA2194_02514 [Roseburia inulinivorans DSM
           16841]
          Length = 699

 Score = 77.0 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 52/298 (17%), Positives = 105/298 (35%), Gaps = 63/298 (21%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
                 P+  +M   Y LV N+G++I+L T+  K++  P++     ++  M  IQP+I+E
Sbjct: 6   NTVFGIPLGYVMWGCYQLVKNYGLSIILFTLVSKIVMLPVSIMVQKNSIRMIQIQPQINE 65

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL------- 451
           ++ K        +    ++L+K  + +P+ G  P+LLQIP+   +  VI   +       
Sbjct: 66  IKYKHAGDKD-RIADEQMELFKKAHYSPMLGMVPMLLQIPLVLGLINVIYNPMQHLMHIK 124

Query: 452 ------------------EMRHAPFWGWIKDLAAADPTNIF------------------- 474
                             ++        +  L   D  + F                   
Sbjct: 125 TSVCDQIVAATCSLMGVDQLGSGAQLQAMAALQNPDNLSFFQNALTGTGIDIEAIAAQAA 184

Query: 475 ---TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN---------- 521
              T F  L   +   + V  W +++ L   +   +     +  QA +L           
Sbjct: 185 TINTHFLGLDLSVVPHITVLAWILLIPLFSCLSTVLLCACQN--QANVLQKEQGALGQWG 242

Query: 522 --WMPVVF-VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
                V F  +     P G+ +YW +SN+ S     ++  ++  +  +         +
Sbjct: 243 VTIFTVAFSTYFTFLVPGGVGLYWIFSNLFSTALIYILNAVYNPKKYIDYEALEESKR 300


>gi|268319894|ref|YP_003293550.1| membrane protein [Lactobacillus johnsonii FI9785]
 gi|262398269|emb|CAX67283.1| membrane protein [Lactobacillus johnsonii FI9785]
          Length = 327

 Score = 77.0 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 91/245 (37%), Gaps = 30/245 (12%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
               +  F    + + + + +        G AI++ T  V+L+  PL           + 
Sbjct: 40  YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99

Query: 392 IQPKIDELREKFKQ---------SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
              K+    +  ++              + +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S E+  + F+G                   +       +   I  +   + 
Sbjct: 160 MGIYQAVAYSKELAASSFFG-------------------ISLGQRSIILTVIATLFYVIQ 200

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            ++ M   P    K   M L   P +  F   S P  L +Y+    +I+I+QQ +   + 
Sbjct: 201 GYLSMIGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLITTFVI 260

Query: 561 GAEIG 565
             ++ 
Sbjct: 261 MPKVK 265


>gi|218283269|ref|ZP_03489324.1| hypothetical protein EUBIFOR_01913 [Eubacterium biforme DSM 3989]
 gi|218215959|gb|EEC89497.1| hypothetical protein EUBIFOR_01913 [Eubacterium biforme DSM 3989]
          Length = 330

 Score = 77.0 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 94/256 (36%), Gaps = 30/256 (11%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F+  +  GWF  +       +    +   + G+ I+LTT+ +++L F   +K  +ST  M
Sbjct: 83  FKESMSKGWFEGLIVWPIAQIINLISSKTDAGVGIILTTLLIQMLVFVFTRKSQMSTQRM 142

Query: 390 KNI----QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + I    Q   ++ ++K  +     + + M  LY+ ++I+P        +Q+P+   +Y 
Sbjct: 143 QEISPEIQKIQNKYKDKTDERSKMQMAQEMQNLYQKYDIHPFGSMLITFIQLPIMMGMYY 202

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               S+ +    F G               L G     +       +  I   +SM +  
Sbjct: 203 ATMRSVSVVSGSFMGI--------SLAGTPLDGFKALDIAYIAIYVLMVIFYIVSMKLPQ 254

Query: 506 KMS------------------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
            +                     P      M + +M  +      S+P  +  YW  S+V
Sbjct: 255 WLKKWQDKKDNVKVKKYAQEETNPMANSMNMSMYFMTAMICIMYISWPMAMSFYWLVSSV 314

Query: 548 ISIVQQAVIMKMHGAE 563
           I + Q  ++ ++   +
Sbjct: 315 IRVCQSLILHQVMNKK 330


>gi|269114775|ref|YP_003302538.1| hypothetical protein MHO_0010 [Mycoplasma hominis]
 gi|268322400|emb|CAX37135.1| Hypothetical protein MHO_0010 [Mycoplasma hominis ATCC 23114]
 gi|291163429|gb|ADD80741.1| putative inner membrane protein translocase component YidC
           [Mycoplasma hominis ATCC 23114]
          Length = 664

 Score = 77.0 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 64/419 (15%), Positives = 146/419 (34%), Gaps = 31/419 (7%)

Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230
            I L + +   + +T+   +  +     +  I +   +   +    Q         +S  
Sbjct: 255 EIVLRDIFQILVSNTLQKWASLKTFKDDKVNIFKEALKLNGSENANQIIEKWNQFIRSYE 314

Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290
           ++  +    ++     +           +          ++       +DG   Y+    
Sbjct: 315 QKSKNKTLLANEDEGRKLLQLFTFVKSVFQQYL---SNVNYVKLPSKTNDGSFVYRKSSL 371

Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML- 349
           +   +    +  T T F  +       I  Y++  A   F  +     + F+   +  L 
Sbjct: 372 SPA-SNYNSEYWTNTIFNNSAILSQKPISTYKEYWAQGPFYGIFVQPIYLFMDSIIKGLG 430

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
            + +  ++    + I++  V   + F  L  +  +   N K  + +      K  +   Q
Sbjct: 431 TTGWSIILALIVVIIIVRLVVFGVSFKSLFSQAKMEEFNQKKAKIESKYAAYKGDRQMMQ 490

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
             Q  + +LYK   I+P +  WP  + +P+   +++VI+ S E++ A ++     L+A  
Sbjct: 491 RKQAEISELYKKEKISPWSQIWPQFIALPILIVVFRVINTSPEIKQATWYS--IQLSAN- 547

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------------PPPADKGQA 517
             ++  +F    F     + + +   + +LS ++   ++               A K Q 
Sbjct: 548 --SLNRVFSNKEFIYLPIILISVG--MQALSQYMPKILNWKKKKSLRVDAYQKAAMKKQN 603

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-------MKMHGAEIGLIDR 569
            + N + +VF+   + F AGL IYW     I I+Q   +             E  L  +
Sbjct: 604 RMSNIISLVFIIFGAFFSAGLQIYWIVGAFILILQHIFVHYFQRTKFFKQKVEPKLTAK 662


>gi|238810221|dbj|BAH70011.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 663

 Score = 77.0 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 98/249 (39%), Gaps = 36/249 (14%)

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           P F + +    +   +    M     ++ +    IA+++T +    + +     Q     
Sbjct: 413 PFFGLFVHPIAWLTGSMRENMPSLAGWSTIFVIIIAVVITRLLALAITWKSQVNQSKQED 472

Query: 388 NMKNIQPKIDELRE-KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
                     +  + K  +      Q+ +  LYK +NINPL     I++  P+F A+++V
Sbjct: 473 IKAKKAKIDAKYADFKGNKQMKIRHQQEIAALYKKNNINPLDAFLNIIISFPIFIAMWRV 532

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM- 505
           I    EM+   + G   D AA   T+   LF         + ++GI  + +++  F    
Sbjct: 533 IQSIPEMKSTHWLG--MDFAA---TSWKRLF------AGEWAYLGILVVALAV-QFFSQF 580

Query: 506 ------------------KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
                             + +   ++K Q +I+    +VF+F    F  G+ +YW +S +
Sbjct: 581 TPRLLNRKKFKERTTIEEEKALKKSNKTQNIIM----IVFLFITLMFSCGVQVYWIFSGL 636

Query: 548 ISIVQQAVI 556
            +I+Q   I
Sbjct: 637 WNIIQTISI 645


>gi|331086951|ref|ZP_08336027.1| hypothetical protein HMPREF0987_02330 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330409612|gb|EGG89051.1| hypothetical protein HMPREF0987_02330 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 421

 Score = 77.0 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 10/115 (8%)

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PADKGQAMI 519
           D      +  +    +   +   + PI+  L+ +I +K+ P          P       +
Sbjct: 233 DAPVNLMMDALKTGAILVAIVALLIPILSGLTQWINIKLMPQSPGMDDRENPMANSMKTM 292

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574
              MP+  VF   + PAGL +YW +S +   VQQ  I K +   + + + ++   
Sbjct: 293 NMIMPLFSVFMCFTMPAGLGLYWIFSAICRSVQQVAINK-YLDRMDMDELVKRNM 346



 Score = 49.2 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 4/97 (4%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412
           + N G+ I+L T+ +     PL  KQ   +     + P++  +++K+K    Q     +Q
Sbjct: 38  IENIGLCIILFTIIIYTFMIPLTIKQQKFSKLSAVMNPELQAIQKKYKNKRDQESMLKMQ 97

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + M  +Y  +  + + GC  +++Q P+  A++KVI  
Sbjct: 98  EEMKMVYDKYGTSQMGGCLQLVIQFPILLALWKVIQN 134


>gi|160914809|ref|ZP_02077023.1| hypothetical protein EUBDOL_00816 [Eubacterium dolichum DSM 3991]
 gi|158433349|gb|EDP11638.1| hypothetical protein EUBDOL_00816 [Eubacterium dolichum DSM 3991]
          Length = 328

 Score = 76.6 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 102/275 (37%), Gaps = 38/275 (13%)

Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369
              K           +    F   +  GWF  +       +    +   + G+ I++TT+
Sbjct: 61  IQKKYKDMKPEDIIQIKKTTFGDAMSEGWFNGLIVWPIAQLINITSSFTDAGVGIIITTL 120

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF----KQSPPQVLQKAMIQLYKTHNIN 425
            ++ + F  + K  V+T  M++IQP++++++ K+          +  + M  LYK + IN
Sbjct: 121 LIQFIIFLFSIKSQVATQKMQSIQPELNKIQAKYAGRNDDRSKMLQAQEMQALYKKNQIN 180

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
           P        +Q PV F +Y     +  +    F+G   DL             +  F   
Sbjct: 181 PFGTILVTFIQFPVIFGMYYATMRAYAVVSGSFYG--IDLTV---------TPLEGFTSQ 229

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSP---------------PPADKGQ------AMILNWMP 524
            + HV I+ ++M +   +  KM                   A   Q        ++ +M 
Sbjct: 230 SWWHVVIF-LLMIVFQLVSFKMPQWLQEYRKKKNHVKEKKYAQPKQSGMAGSMNMMMYMS 288

Query: 525 V-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
             +      ++P  +  YW   +V+ ++Q  ++ K
Sbjct: 289 TGMIAIFAINWPLAMSFYWLVGSVVRVLQNILVHK 323


>gi|19554287|ref|NP_602289.1| putative inner membrane protein translocase component YidC
           [Corynebacterium glutamicum ATCC 13032]
 gi|62391944|ref|YP_227346.1| inner membrane protein translocase component YidC [Corynebacterium
           glutamicum ATCC 13032]
 gi|145297091|ref|YP_001139912.1| putative inner membrane protein translocase component YidC
           [Corynebacterium glutamicum R]
 gi|21325870|dbj|BAC00491.1| Preprotein translocase subunit YidC [Corynebacterium glutamicum
           ATCC 13032]
 gi|41223091|emb|CAF19036.1| Preprotein translocase subunit YidC [Corynebacterium glutamicum
           ATCC 13032]
 gi|140847011|dbj|BAF56010.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 317

 Score = 76.6 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/287 (19%), Positives = 107/287 (37%), Gaps = 66/287 (22%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++ +++              + ++IM  T  V+++          S   
Sbjct: 1   MLNFIYWPISAILWFWHKAFSFVLSPDSGITWALSIMFLTFTVRMVLVKPMVNTMRSQRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+++ PK+  +REK+K    Q + +   +L K   +NP+AGC P+L+QIPVF  ++ V+ 
Sbjct: 61  MQDMAPKMQAIREKYKN-DQQKMMEETRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLR 119

Query: 449 I-------------SLE----------------------MRHAPFWGWIKDLAAADPTNI 473
                         ++E                      +  AP   +I   A  D  + 
Sbjct: 120 SFNRTGSGVGQLEMTVEQNANTPNYIFGVDEVQSFLRADLFGAPLSSYITMPA--DAFDA 177

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP----PADKGQAM----------- 518
           F    +    +       I  I+++  M  ++ ++       A K QA            
Sbjct: 178 FLGLDVSRLNIALVAAPMILIIVVATHMNARLSVNRQEARKAAGKQQAASSDQMAMQMQM 237

Query: 519 ----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
               +L +MP   +F    +  GL++Y   +NV +  QQ  I     
Sbjct: 238 MNKMMLWFMPATILFTGFIWTIGLLVYMMSNNVWTFFQQRYIFAKMD 284


>gi|57234200|ref|YP_181756.1| inner membrane protein, 60 kDa [Dehalococcoides ethenogenes 195]
 gi|57224648|gb|AAW39705.1| inner membrane protein, 60 kDa [Dehalococcoides ethenogenes 195]
          Length = 277

 Score = 76.6 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 8/195 (4%)

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428
           + ++L  +PL +KQ  +T  M+ I   ++ L++K      Q L +  ++LYK   ++P  
Sbjct: 1   MVIRLALWPLNRKQLTATKKMQEITVHMEALKKKHGN-DRQKLAEEQMKLYKESGVSPTG 59

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL-AAADPTNIFTLFGILPFYLPGF 487
              P+L+Q P++ A+Y+ I   L +    F      L +         L     +     
Sbjct: 60  CLVPMLIQFPIWIALYQAIVRVLAVTPEDFMNLADHLYSWPVVYQTLPLSNHFLWMDLSL 119

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPA-----DKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
                  +++ +SM++Q KMS P A          M+   MP +F F   SFP+GL  YW
Sbjct: 120 PDF-ALAVLVGVSMYVQQKMSTPKAINQQQAAQGQMMSFMMPFMFFFFSLSFPSGLAFYW 178

Query: 543 SWSNVISIVQQAVIM 557
             S ++ I+ Q  I 
Sbjct: 179 FVSAIVGIIMQYFIT 193


>gi|171920597|ref|ZP_02931850.1| membrane protein OxaA [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|188024459|ref|ZP_02997108.1| membrane protein OxaA [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188518432|ref|ZP_03003923.1| membrane protein OxaA [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|188524211|ref|ZP_03004271.1| membrane protein OxaA [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195867408|ref|ZP_03079412.1| membrane protein OxaA [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198273351|ref|ZP_03205887.1| membrane protein OxaA [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209554229|ref|YP_002285057.1| putative inner membrane protein translocase component YidC
           [Ureaplasma urealyticum serovar 10 str. ATCC 33699]
 gi|225550935|ref|ZP_03771884.1| membrane protein OxaA [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551006|ref|ZP_03771952.1| membrane protein OxaA [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903307|gb|EDT49596.1| membrane protein OxaA [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|188018755|gb|EDU56795.1| membrane protein OxaA [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188998160|gb|EDU67257.1| membrane protein OxaA [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|195659986|gb|EDX53366.1| membrane protein OxaA [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195660884|gb|EDX54137.1| membrane protein OxaA [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198249871|gb|EDY74651.1| membrane protein OxaA [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209541730|gb|ACI59959.1| membrane protein OxaA [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225378821|gb|EEH01186.1| membrane protein OxaA [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225380089|gb|EEH02451.1| membrane protein OxaA [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 383

 Score = 76.6 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 117/261 (44%), Gaps = 23/261 (8%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFY-FIAKPMFMLMSYFYNLVGNFGIAI------MLTTVF 370
           + +       P  +   D+G FY     P+  ++ +F     ++   +      ++  + 
Sbjct: 99  LIYSGTGPWYPMSDFSFDYGPFYALFVWPIAQILLHFMYATRDWPAGLNAILGLIIILLI 158

Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINP 426
           ++++   ++ +  + T  +  IQ KI E+  K+K +      Q  Q    +LY+ HN+ P
Sbjct: 159 IRVITMLISARATIQTERISEIQGKIAEINAKYKDAKDMQSRQKKQMETKELYQKHNVKP 218

Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486
           LA    +++ +P+F  IY+V++I   ++      +I DL+A   + IF+ F    +    
Sbjct: 219 LAPFESMIITLPIFLIIYRVVTILRPLKFIS-IFYIWDLSATPISEIFSNFTTSGWPYIF 277

Query: 487 FMHVGIWPIIMS--LSMFIQMKMSPPPA-----DKGQ----AMILNWMPVVFVFALSSFP 535
           F+ + I   I+S  +   +  K +         +K Q     M  N + +V    ++   
Sbjct: 278 FLLIIIPVQILSQKIPQLLAKKRNRSATTVGAKNKQQLKRVRMTQNIIAIVLAVVVAISA 337

Query: 536 AGLIIYWSWSNVISIVQQAVI 556
           +G+ +YW ++ + +I+Q  +I
Sbjct: 338 SGIGLYWFFNAIFTILQSYII 358


>gi|291526550|emb|CBK92137.1| Preprotein translocase subunit YidC [Eubacterium rectale DSM 17629]
          Length = 438

 Score = 76.2 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 11/127 (8%)

Query: 443 IYKVISISLEMRHAP--FWGWIKDLAAADP--TNIFTLFGILPFYLPGFMHVGIW-PIIM 497
            +  I  ++E  H     + +   L  +D     I + F   P     F+ + +  P++ 
Sbjct: 221 FFDGIQSAVEKTHDALLHFNYFLGLNISDTPWYIIKSNFTDKPDKWLLFVILALLIPVLS 280

Query: 498 SLSMFIQMKMSPPPA---DKG--QAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
            L+  + +K+ P      D+   Q  ++   MP +      + P GL IYW  S ++  +
Sbjct: 281 YLTQMLNIKLMPQATNGNDQMASQMKMMNLMMPFMSFVICFTVPVGLGIYWICSALVRGI 340

Query: 552 QQAVIMK 558
           QQ  + +
Sbjct: 341 QQFFVNR 347



 Score = 52.3 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
                + +     V +  ++I++ T+ + +   PL  KQ   +   + +QP++  ++ K+
Sbjct: 27  WIYSGISNITGGRVESVVLSIVIITIIIYMCLLPLTIKQQKFSKLSQKMQPEMQAIQAKY 86

Query: 404 KQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           K    Q    AM +    LY+ + I+P+  C  +L+Q+P+ FA+Y+V   
Sbjct: 87  KNKKDQASMMAMQEETQLLYQKYGISPMGSCVQMLIQMPILFALYRVFYN 136


>gi|237786652|ref|YP_002907357.1| putative inner membrane protein translocase component YidC
           [Corynebacterium kroppenstedtii DSM 44385]
 gi|237759564|gb|ACR18814.1| preprotein translocase subunit [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 324

 Score = 76.2 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 54/288 (18%), Positives = 102/288 (35%), Gaps = 56/288 (19%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
               +     +  +A   F  +    +    + ++I+     +++  F     Q  S   
Sbjct: 1   MLNFIYYPVSWVMLAWYKFFGLFLNPDSGVTWALSIIFLVFTIRIFLFKPMANQMRSGRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QPK+ E+R K+K    Q     M +L K   +NPLA C P L+Q+P+F ++Y V+ 
Sbjct: 61  MQELQPKMQEIRAKYKN-DQQTQAIEMRKLQKEMGVNPLASCLPALVQMPIFISLYHVLR 119

Query: 449 I-------------SLE-MRHAPFWGW----------IKDLAAADPTNI---------FT 475
                         ++E  R+ P +G+           +   A     I         F+
Sbjct: 120 SFNRTGTGHGELGMTVEQTRNTPNYGFGATEVQSFLDARLFGAPLSAYIRMPEKAFDAFS 179

Query: 476 LFGILPFYLPGFMHVGI-WPIIMSLSMFI----QMKMSPPPADKGQAM------------ 518
             G + F     + V I   II +L+        ++ +                      
Sbjct: 180 ASGSVDFTRTNILAVAIPLMIISALATHFNARNMVRRNKARQAADPKKNAQNPQMAMQAN 239

Query: 519 -----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
                +L   P + +     +  GL+ Y   +NV ++ QQ V+     
Sbjct: 240 MMNNMMLWLFPAMILITGMFWQIGLLTYMLANNVWTLGQQIVLFNKMD 287


>gi|329768863|ref|ZP_08260291.1| hypothetical protein HMPREF0433_00055 [Gemella sanguinis M325]
 gi|328837226|gb|EGF86863.1| hypothetical protein HMPREF0433_00055 [Gemella sanguinis M325]
          Length = 295

 Score = 76.2 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 99/265 (37%), Gaps = 47/265 (17%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----- 391
            ++    KPM M +S  +  VG++G +I++ T+ V+++  P     Y +    +      
Sbjct: 28  TFYETFVKPMDMFLSKIHEYVGSWGWSIVIITLIVRIIILPFMLNNYKTQNKARRGQVLA 87

Query: 392 ------IQPKIDELREK-----------FKQSPPQVLQKAMIQLYKTHNINPLA--GCWP 432
                 +Q K    REK             ++    LQ+  + + K ++ NP++  GC P
Sbjct: 88  RPELEVVQAKQKAAREKEARAISNEEKTQARAELMELQREQMAIMKKYDANPISVGGCLP 147

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +L+Q+P    ++  ++    +  A            D T +    GI       ++   I
Sbjct: 148 LLIQMPFLTGLFFTLTNP--LYSAGII---------DSTYL----GIFSLGTRSYVLPII 192

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMIL-------NWMPVVFVFALSSFPAGLIIYWSWS 545
             ++ +    + M ++PP    GQ  +           PV+           + +Y+   
Sbjct: 193 AFLVYAAQTKLTMAINPPLVQPGQEAMQGQMQMMQWLSPVMIAIFSFWVAGAVAVYYIVG 252

Query: 546 NVISIVQQAVIMKMHGA-EIGLIDR 569
            +  I Q  +  K++   +     +
Sbjct: 253 GLFLIFQTYLGYKIYPPYKPEKEKK 277


>gi|260905353|ref|ZP_05913675.1| preprotein translocase YidC subunit [Brevibacterium linens BL2]
          Length = 270

 Score = 76.2 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 96/249 (38%), Gaps = 25/249 (10%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y++   +  L+        +  +AI++ T+ V+ +  P+   Q  +    K + PKI EL
Sbjct: 17  YWVVTWLTTLLEPLAG-TASAALAIVVLTIIVRAVLIPVGLSQVRAGITRKRLAPKITEL 75

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           + ++K++P  ++Q+ M++LYK    +P+AGC P+L Q+PV  A+Y +   S    HA   
Sbjct: 76  QTRYKKTPE-LMQQKMMELYKEEKASPMAGCLPVLAQMPVLMAVYGIFIQSTIGGHANDL 134

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-----------------------PII 496
                L          L       +      G+                        P+ 
Sbjct: 135 LNHSLLGVPLNAGFVGLLTGGNLSVVSAAVFGVIVIIIAVVAALSRHLLTPDMPQTPPVR 194

Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            S S     +    P   G   +L++MP +        P    +Y   +   ++ ++ V+
Sbjct: 195 ASGSQNSTTEGPAMPDLSGVTRVLSFMPFMTAVIALFVPLAATLYLMTTTAWTLTERLVL 254

Query: 557 MKMHGAEIG 565
            ++      
Sbjct: 255 NRVLKVHEQ 263


>gi|213400719|gb|ACJ47008.1| hypothetical protein [Wolbachia endosymbiont of Dirofilaria
           immitis]
          Length = 171

 Score = 75.8 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 2/164 (1%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282
            D  L E  Y DI K  +     S  +W G +DKYW +  IP K    +   K+ + +  
Sbjct: 8   FDNKLEEWTYKDIAKKHLIKASTSGKNWFGFADKYWLTAIIPEKPDKINVSIKHTNINNI 67

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
            ++QA F  +  +ILPG SI++ N+ FAGAK+   + +Y+  L IP F+  +D+G  YF+
Sbjct: 68  DKFQADFVKSHKSILPGTSISSVNYFFAGAKKLNLLDYYKSALNIPLFDKAVDFGILYFV 127

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            KP+F+L+ YF  ++ NFG+AI+  T+ +KLL  PL+ + Y+S 
Sbjct: 128 TKPVFLLLEYFNFILKNFGLAILALTLVIKLLMLPLSNRSYISM 171


>gi|303319705|ref|XP_003069852.1| 60Kd inner membrane protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240109538|gb|EER27707.1| 60Kd inner membrane protein [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 495

 Score = 75.8 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 98/254 (38%), Gaps = 40/254 (15%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390
             +   + +  +  +  L+   +   G       +   VF+++  F         +A ++
Sbjct: 123 KELGLDYGFGPSSLIETLLESIHIYAGLPWWGSTIAAAVFIRVALFKFNLNASDMSAKLR 182

Query: 391 NIQPKIDELREKFKQSPPQVLQKA------MIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
            +QP    L+E+  ++  +            + + +  +   +   +  +LQIP+ F  +
Sbjct: 183 RMQPITKPLQERMLKAVREGNNLEGLKLKQEMAMIREQHGVKMWKTFVPMLQIPLGFGFF 242

Query: 445 KVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
           +V+     +      +  + W+ D+  +DP                     I P++   S
Sbjct: 243 RVLRGMSSLPVPGLLSEQFLWLNDITLSDPFF-------------------ILPLVTGGS 283

Query: 501 MFIQMKMS-PPPAD----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           M+  +K       D         +L  +PV+   A+S +PA L +Y++ +++++++Q  +
Sbjct: 284 MYFAIKRGGETGMDFANSPLGKFMLYGLPVISTTAMSFWPAVLQLYFASTSLLALIQAYL 343

Query: 556 IM-----KMHGAEI 564
           +      K+ G E 
Sbjct: 344 VTSPGFRKLAGVEP 357


>gi|238883319|gb|EEQ46957.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 374

 Score = 75.8 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 92/253 (36%), Gaps = 29/253 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     +  L+   +   G      I++ T+ V+L+ FPL  +   +   M  I+P+IDE
Sbjct: 91  WGPTSLIERLLEVTHVYTGLPWWGTIVVATIAVRLVLFPLYVRASSNATKMSKIKPQIDE 150

Query: 399 L--REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIYKVISISLE 452
           L  + K   +  Q+      +L    N           +Q+P     F A+ K+ + ++E
Sbjct: 151 LLQQIKTGDTVDQMRAMEKRRLIMKENGVSTLATLFPAVQLPLAYGFFQALRKMANHNVE 210

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
                 + W ++L   DP                 +        M+  M           
Sbjct: 211 GFSDQGYAWFQNLIEVDPYLGLQAISAAAIIAVVRVGGETGQHAMAAGM----------- 259

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ-----QAVIMKMHGAEIGLI 567
                 ++  +P+  +F    F + +I+Y++ +++ S++Q      +   K+ G    L 
Sbjct: 260 ----KKVMTVVPIASIFITKGFASAIILYFAVNSIFSLIQSSLFKSSWFRKIAGMPPKL- 314

Query: 568 DRLRSTFSKNYNS 580
             L    + N  +
Sbjct: 315 -SLAEMQANNPKA 326


>gi|241957285|ref|XP_002421362.1| cytochrome oxidase biogenesis protein, putative; inner membrane
           protein, mitochondrial precursor, putative;
           mitochondrial inner membrane translocase, putative;
           oxidase assembly protein, putative [Candida dubliniensis
           CD36]
 gi|223644706|emb|CAX40696.1| cytochrome oxidase biogenesis protein, putative [Candida
           dubliniensis CD36]
          Length = 376

 Score = 75.8 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 93/253 (36%), Gaps = 29/253 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     +  L+   +   G      I++ T+ V+L+ FPL  +   +   M  I+P+IDE
Sbjct: 93  WGPTSLIERLLEVTHVYTGLPWWGTIVVATIAVRLILFPLYVRASSNATKMSKIKPQIDE 152

Query: 399 L--REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIYKVISISLE 452
           L  + K   +  Q+      +L    N           +Q+P     F A+ K+ + ++E
Sbjct: 153 LLQQIKTGDTVEQMRAMEKRRLIMKENGVSTLATLFPAVQLPLAYGFFQALRKMANHNVE 212

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
                 + W ++L   DP     +           +        M+  M           
Sbjct: 213 GFSDQGYAWFQNLIEVDPYLGLQVISAAAIIAVVRVGGETGQHAMAAGM----------- 261

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ-----QAVIMKMHGAEIGLI 567
                 ++  +P+  +F    F + +I+Y++ +++ S++Q      +   K+ G    L 
Sbjct: 262 ----KKVMTVVPIASIFITKGFASAIILYFAVNSIFSLIQSSLFKSSWFRKIAGMPPKL- 316

Query: 568 DRLRSTFSKNYNS 580
             L    + N  +
Sbjct: 317 -SLAEMQANNPKA 328


>gi|242372092|ref|ZP_04817666.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           epidermidis M23864:W1]
 gi|242350204|gb|EES41805.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus
           epidermidis M23864:W1]
          Length = 275

 Score = 75.8 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 41/264 (15%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN---- 391
            ++    KPM  L+ +   L   N+G+AI++  + V+ +  PL   Q  +   M+     
Sbjct: 32  IFYNTFVKPMDGLLHFLGRLFHDNYGLAIIVIVLIVRFILLPLMLIQVKNMHMMREKTKV 91

Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIY 444
           ++P++D +REK K +  Q       + +++ YK++ INP   + GC P+++QIP+   +Y
Sbjct: 92  VKPELDAIREKIKNADSQEERNAANQLLMKKYKSYGINPFKNMIGCLPVIIQIPILMGLY 151

Query: 445 KVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
             +    S  +   P + W  +L   +                      I  II +   F
Sbjct: 152 MSLKYPTSDGITKYPHFLWF-NLTEPN---------------------LIMTIIAASMYF 189

Query: 503 IQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           IQ  ++     K Q      I+   P+   +A  +  + L +YWS S    I+Q      
Sbjct: 190 IQPLVNSIHYPKDQRTTYYVIMVVSPIFITYASLTSASALGLYWSISAGFLIIQMHFAHS 249

Query: 559 MHGA-EIGLIDRLRSTFSKNYNSQ 581
            +G         L+   ++N   +
Sbjct: 250 YYGKLARQEAANLKKHLNQNQEKE 273


>gi|228474645|ref|ZP_04059376.1| putative membrane protein [Staphylococcus hominis SK119]
 gi|228271308|gb|EEK12676.1| putative membrane protein [Staphylococcus hominis SK119]
          Length = 280

 Score = 75.8 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/241 (20%), Positives = 92/241 (38%), Gaps = 40/241 (16%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK- 390
                ++    KPM  L+    +    N+G+AI++    ++L+  PL   Q  +   ++ 
Sbjct: 25  AQHGLFYTVFVKPMDDLLHVLGHAFNENYGLAIIVIVFILRLILMPLMCIQVKNIHVIRG 84

Query: 391 -------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVF 440
                   I    ++++E       +   K +++ Y  + INP   L G +PIL+QIP+ 
Sbjct: 85  KTDVVKPEINKIQEKIKEAQSPEERRAANKLLMKKYNEYGINPFKNLIGTFPILIQIPIL 144

Query: 441 FAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
             +Y  I    S  +   P + W  +L   D                      I  II +
Sbjct: 145 LGLYTSIKYPTSGGITQHPHFLWF-NLMHTD---------------------IIMTIIAA 182

Query: 499 LSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           +  FIQ  ++     K +      ++   P+   +A     + L +YW+ S    I+Q  
Sbjct: 183 VMYFIQPLVNSIHYPKNERRSYYVMMVLSPLFITYASLHSASALSLYWAISATFLIIQMH 242

Query: 555 V 555
            
Sbjct: 243 F 243


>gi|300934353|ref|ZP_07149609.1| putative inner membrane protein translocase component YidC
           [Corynebacterium resistens DSM 45100]
          Length = 324

 Score = 75.8 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 107/291 (36%), Gaps = 61/291 (20%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            F      G  +F  K    ++     +   + +AI+     +++        Q  S+  
Sbjct: 3   DFIYYPISGVLWFWHKLFSFVLDPSSGVT--WALAIVFLVFTIRIFLIKPMANQLRSSRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447
           M+  QPK+ EL+ K K     +    M +L K   +NPLA C P L+Q+P+F  ++ V+ 
Sbjct: 61  MQEFQPKMQELQRKHKNDRETLAI-EMRKLQKEMGVNPLASCIPALIQMPIFIGLFHVLR 119

Query: 448 -------------SISLEMRHAPFWGWIKD--------------LA---AADP--TNIFT 475
                            E R+ P + +  D              L+   + DP   + F+
Sbjct: 120 SFNRTATSFGAPGMTVQETRNTPNYFFGVDEVQSFLDARLFGSPLSGYISMDPANYSAFS 179

Query: 476 LFGILPFYLPGFMHVGIWPIIMS--LSMFIQMKMSPPPADKGQAM--------------- 518
             G    +    + + I P++++  + M    +MS   + K QA                
Sbjct: 180 PEGAGIDFSRMNIILIIVPLMLASAVMMHFTARMSIDRSKKRQAANPKKDADPRQQQMQM 239

Query: 519 --------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
                   +L  MP +++     +  GL IY   +N  ++ QQ ++     
Sbjct: 240 QMDMMQRMMLWVMPALYLTGGFMWQVGLAIYMFVNNAWTVAQQKLLFAKMD 290


>gi|71980488|ref|NP_493356.2| hypothetical protein C01A2.3 [Caenorhabditis elegans]
 gi|63108013|emb|CAB02698.2| C. elegans protein C01A2.3, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 366

 Score = 75.8 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 84/244 (34%), Gaps = 37/244 (15%)

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
                E L  W W+   +   + L S   +L   + + I+  TV ++ L   +       
Sbjct: 72  GASVLEELGLWTWWKPSSYFRWALESIHVHLDIPWWVTIVAATVTLRALLIGVPVMSQKL 131

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMI-------QLYKTHNINPLAGCWPILLQIP 438
            A     + +++E R++  ++  +  Q              ++ +I        +     
Sbjct: 132 VAKQSMYRKEMNEFRDRIDEARKENNQLLQQQILLEQRDFLRSKDIRLGRQFMVMAANGA 191

Query: 439 VF----FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           VF    FAI K++ ++          W  DL A DP                       P
Sbjct: 192 VFATQFFAIKKMVVVNYPGLSTGGTLWFTDLTATDPYY-------------------ALP 232

Query: 495 IIMSLSMFIQMKM------SPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNV 547
            I + +M +  K+      S           + + +PVV     S F  GL +YW+ SN 
Sbjct: 233 FISAATMALVTKVGIEMGTSADQMPPIMRAFMTYGLPVVIFGVSSQFATGLCVYWTASNA 292

Query: 548 ISIV 551
           +S++
Sbjct: 293 VSLI 296


>gi|238916077|ref|YP_002929594.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC
           27750]
 gi|238871437|gb|ACR71147.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC
           27750]
          Length = 633

 Score = 75.8 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 99/249 (39%), Gaps = 26/249 (10%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              ++  +  +M++ Y L+ ++G+AI+L T+  K++  P++     ++  M  +QP I+ 
Sbjct: 1   MEILSTALGYVMNFCYKLLHDYGLAIILFTLISKIVLLPVSIWVQKNSIKMVKMQPDINR 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +  K        + +   +LYK    NPLA   P+++QI +   +  VI   +    A  
Sbjct: 61  ILIKHYGDKD-EIAEEQSKLYKKEKYNPLASLIPLIIQIILLLGVVAVIKDGINEGVANM 119

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQ 516
                DL                     +    I PII  +S ++              Q
Sbjct: 120 KFCGYDLT--------------WITTKQWGLSIITPIIAGVSAWLLCVAQNASNVLQAEQ 165

Query: 517 AMI----LNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQ----QAVIMKMHGAEIGLI 567
           + +    +    V + ++      AG+ +YW+ SN+ +I+Q       I   +  +   +
Sbjct: 166 SKLNKYGMMIFSVGLSLYLGCFVYAGVALYWTASNIFAILQLYLLNWAINPKNYVDYEAL 225

Query: 568 DRLRSTFSK 576
           +  +   ++
Sbjct: 226 EETKKELAE 234


>gi|289549934|ref|YP_003470838.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis
           HKU09-01]
 gi|315659439|ref|ZP_07912302.1| lipoprotein [Staphylococcus lugdunensis M23590]
 gi|289179466|gb|ADC86711.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis
           HKU09-01]
 gi|315495558|gb|EFU83890.1| lipoprotein [Staphylococcus lugdunensis M23590]
          Length = 273

 Score = 75.8 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 88/242 (36%), Gaps = 39/242 (16%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN------ 391
           +FY   KP+  L+     L  ++GIAI+L  + ++ +  PL   Q      ++       
Sbjct: 31  FFYVFVKPIDWLLHSIGQLFHSYGIAIILIVIIIRSILLPLMLNQMKQMHTLREKRAIVQ 90

Query: 392 --IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKV 446
             I     ++R+       +   + ++  YK + I+P     G  PI +QIP+   +   
Sbjct: 91  DEISDIQTQMRQASTPEIRKEANQLLLAKYKEYGISPFKSILGSLPIFIQIPIILGLLAC 150

Query: 447 I--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           I    S  +   P + W  +L   D                         ++  L  FIQ
Sbjct: 151 IKHPTSDALAQHPHFLWF-NLMHPDIW---------------------LALLAGLLYFIQ 188

Query: 505 MKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
             ++     KGQ      ++   P+  ++A     A + +YW  S    IVQ     + +
Sbjct: 189 PLVNAIHYPKGQRKTYYTMMVLSPLFIIYASLHSAAAISLYWVVSASFLIVQTHFGHRRY 248

Query: 561 GA 562
             
Sbjct: 249 KK 250


>gi|13358167|ref|NP_078441.1| putative inner membrane protein translocase component YidC
           [Ureaplasma parvum serovar 3 str. ATCC 700970]
 gi|170762036|ref|YP_001752687.1| putative inner membrane protein translocase component YidC
           [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|171920376|ref|ZP_02690825.2| membrane protein OxaA [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|183508481|ref|ZP_02958012.1| membrane protein OxaA [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701708|ref|ZP_02971400.1| membrane protein OxaA [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|38503225|sp|Q9PPN7|OXAA_UREPA RecName: Full=Membrane protein oxaA
 gi|11356766|pir||F82871 conserved hypothetical membrane lipoprotein UU602 [imported] -
           Ureaplasma urealyticum
 gi|6899613|gb|AAF31016.1|AE002158_14 conserved hypothetical membrane lipoprotein [Ureaplasma parvum
           serovar 3 str. ATCC 700970]
 gi|168827613|gb|ACA32875.1| membrane protein OxaA [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|171902808|gb|EDT49097.1| membrane protein OxaA [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|182675901|gb|EDT87806.1| membrane protein OxaA [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700974|gb|EDU19256.1| membrane protein OxaA [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 383

 Score = 75.8 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 117/261 (44%), Gaps = 23/261 (8%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFY-FIAKPMFMLMSYFYNLVGNFGIAI------MLTTVF 370
           + +       P  +   D+G FY     P+  ++ +F     ++   +      ++  + 
Sbjct: 99  LIYSGTGPWYPMSDFSFDYGPFYALFVWPIAQILLHFMYATRDWPAGLNAILGLIIILLI 158

Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINP 426
           ++++   ++ +  + T  +  IQ KI E+  K+K +      Q  Q    +LY+ HN+ P
Sbjct: 159 IRVITMLISARATIQTERISEIQGKIAEINAKYKDAKDMQSRQKKQMETKELYQKHNVKP 218

Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486
           LA    +++ +P+F  IY+V++I   ++      +I DL+A   + IF+ F    +    
Sbjct: 219 LAPFESMIITLPIFLIIYRVVTILRPLKFIS-IFYIWDLSATPISEIFSNFTTSGWPYIF 277

Query: 487 FMHVGIWPIIMS--LSMFIQMKMSPPPA-----DKGQ----AMILNWMPVVFVFALSSFP 535
           F+ + I   I+S  +   +  K +         +K Q     M  N + +V    ++   
Sbjct: 278 FLLIIIPVQILSQKIPQLLARKRNRNATTVGAKNKQQLKRVRMTQNIIAIVLAVVVAISA 337

Query: 536 AGLIIYWSWSNVISIVQQAVI 556
           +G+ +YW ++ + +I+Q  +I
Sbjct: 338 SGIGLYWFFNAIFTILQSYII 358


>gi|68469228|ref|XP_721401.1| hypothetical protein CaO19.6565 [Candida albicans SC5314]
 gi|68470253|ref|XP_720888.1| hypothetical protein CaO19.13918 [Candida albicans SC5314]
 gi|77022678|ref|XP_888783.1| hypothetical protein CaO19_6565 [Candida albicans SC5314]
 gi|46442780|gb|EAL02067.1| hypothetical protein CaO19.13918 [Candida albicans SC5314]
 gi|46443318|gb|EAL02601.1| hypothetical protein CaO19.6565 [Candida albicans SC5314]
 gi|76573596|dbj|BAE44680.1| hypothetical protein [Candida albicans]
          Length = 374

 Score = 75.8 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 92/253 (36%), Gaps = 29/253 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +     +  L+   +   G      I++ T+ V+L+ FPL  +   +   M  I+P+IDE
Sbjct: 91  WGPTSLIERLLEVTHVYTGLPWWGTIVVATIAVRLVLFPLYVRASSNATKMSKIKPQIDE 150

Query: 399 L--REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIYKVISISLE 452
           L  + K   +  Q+      +L    N           +Q+P     F A+ K+ + ++E
Sbjct: 151 LLQQIKTGDTVDQMRAMEKRRLIMKENGVSTLATLFPAVQLPLAYGFFQALRKMANHNVE 210

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
                 + W ++L   DP                 +        M+  M           
Sbjct: 211 GFSDQGYAWFQNLIEVDPYLGLQAISAAAIIAVVRVGGETGQHAMAAGM----------- 259

Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ-----QAVIMKMHGAEIGLI 567
                 ++  +P+  +F    F + +I+Y++ +++ S++Q      +   K+ G    L 
Sbjct: 260 ----KKVMTVVPIASIFITKGFASAIILYFAVNSIFSLIQSSLFKSSWFRKIAGMPPKL- 314

Query: 568 DRLRSTFSKNYNS 580
             L    + N  +
Sbjct: 315 -SLAEMQANNPKA 326


>gi|290982689|ref|XP_002674062.1| predicted protein [Naegleria gruberi]
 gi|284087650|gb|EFC41318.1| predicted protein [Naegleria gruberi]
          Length = 424

 Score = 75.8 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 81/259 (31%), Gaps = 28/259 (10%)

Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375
             +   + + A    EM      +   +K +   +   ++    +  +I      ++L+ 
Sbjct: 127 DDVAGQQLEAAENMSEMFSSITDYLNPSKLLEACIIALHDAGLPWWGSIATVGFALRLVM 186

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA-----MIQLYKTHNINPLAGC 430
            PL      S+  M  +   +  L++          ++        ++ K          
Sbjct: 187 SPLNVMSMRSSTIMSKLGTSLTNLKKDQVDPKKSPTEREHARKTYEEITKKEGFKMSHMF 246

Query: 431 WPILLQIPVFFAIYKVISIS---LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487
              LLQ P+F A +  I+     +E        W  DL   DPT +  +     F     
Sbjct: 247 L-PLLQSPIFIAFFFCINRMVREIEGLQWGGMLWFNDLTVKDPTYVLPIISASCFMAVFL 305

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI---LNWMPVVFVFALSSFPAGLIIYWSW 544
           ++                 +    + + Q++I   +       V      PA L +YW  
Sbjct: 306 VNTF---------------LRSSGSGRIQSLIAVGMGVFSFALVPFTGRLPAALFMYWIP 350

Query: 545 SNVISIVQQAVIMKMHGAE 563
           SN   I+   ++M     +
Sbjct: 351 SNFFQILF-YLLMSRKPVK 368


>gi|227834359|ref|YP_002836066.1| preprotein translocase YidC subunit [Corynebacterium aurimucosum
           ATCC 700975]
 gi|262183091|ref|ZP_06042512.1| putative inner membrane protein translocase component YidC
           [Corynebacterium aurimucosum ATCC 700975]
 gi|227455375|gb|ACP34128.1| preprotein translocase YidC subunit [Corynebacterium aurimucosum
           ATCC 700975]
          Length = 329

 Score = 75.8 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 54/311 (17%), Positives = 106/311 (34%), Gaps = 68/311 (21%)

Query: 338 WFYFIAKPMFMLMSYFYN---------LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++ +++            G + IAI+L T  +K +       Q  S+  
Sbjct: 1   MLNFIYWPISAVLWFWHWLLSFVLDSAWGGTWIIAIVLLTWTLKAIMVKPTITQLRSSRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ IQP+I ELR K+     +   + M ++YK   + P+AGC P+  QIP+F  ++ V+ 
Sbjct: 61  MQEIQPQIQELRTKYANDQTKA-AQEMQRIYKESGVRPVAGCLPMFAQIPMFIGLFHVLR 119

Query: 449 I------------------SLEMRHAPFWGWIKDLAAADPTNIFTLFGIL---------- 480
                                E  +A    +I +           +FG+           
Sbjct: 120 SFDRTVAVAGGIGHPAGEAMSEEMNASIANYIFEPELVKQFVDAKIFGVPLVANLRLNSG 179

Query: 481 ------PFYLPGFMHVGIWPIIMSLSMFIQMKMS----------PPPADKGQAM------ 518
                    +   + +     I+++      +M+             A            
Sbjct: 180 LEIVKETTTMQAAVIIVPLIAIIAVLTHFNARMTLNRQEARRAAGKTATPQGQNAEMMQQ 239

Query: 519 --------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
                   +L +MP + VF+   +P GL+ Y   + V +  Q  ++      E       
Sbjct: 240 QMAMMNKMMLWFMPAMLVFSGFIWPIGLLFYMLANTVWTFFQTRIVYAKMDREEEEEAAA 299

Query: 571 RSTFSKNYNSQ 581
           ++   +    +
Sbjct: 300 KAELKRTSAPK 310


>gi|311740346|ref|ZP_07714175.1| membrane protein OxaA [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304530|gb|EFQ80604.1| membrane protein OxaA [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 314

 Score = 75.4 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 112/278 (40%), Gaps = 35/278 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
            +     P+  +M +++ L+ +       + I+I+L  + V+ +  PL      S     
Sbjct: 1   MYEVFMYPVSGIMKFWHWLISSFVGESTAWLISIILLVITVRGVVVPLNWISVRSARIGA 60

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            I+P+ + ++++   +        ++Q    L K++N NP AGC P L+ IP F  +Y+V
Sbjct: 61  LIRPENNRIKKQMNNATTTEEMAELMQEEKNLMKSYNYNPAAGCVPPLIMIPAFIGLYQV 120

Query: 447 I--SISLEMRHAPFWGWIK--DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM- 501
           +    ++E R +   G +   D++A   T  +           G +   I    ++ +M 
Sbjct: 121 LLRMSNIE-RGSTTVGMLNASDVSAFRETTFYGAPLTDFAREHGDLINPILIAAIAFTMA 179

Query: 502 --FIQMKMSPPPADKGQA------MILNWMPVVFVFALSSF------PAGLIIYWSWSNV 547
              I +  S       Q       +++ ++ +V  F L         P  +I+YW  + +
Sbjct: 180 NSVISLVRSFRTTQFDQKVNRRVFILMGFLLLVIPFFLWHLAQTGPIPVAIILYWGCAYL 239

Query: 548 ISIVQQA----VIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             ++Q A    ++ + +     +    R +  +    +
Sbjct: 240 FMLIQTAIFEIILHRDYPLTEDVHAMRRESIRRWRKRE 277


>gi|289549616|ref|YP_003470520.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis
           HKU09-01]
 gi|289179148|gb|ADC86393.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis
           HKU09-01]
          Length = 258

 Score = 75.4 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 84/212 (39%), Gaps = 39/212 (18%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMKNIQPKIDELREKFKQSPPQVLQK 413
            N+G+AI++    V+L+  PL              MK +QPKI+ +++K K +  Q L+ 
Sbjct: 52  HNYGLAIVIIVCLVRLILMPLMLHNQKQMAITSMKMKELQPKIEPIQQKMKAAATQQLKN 111

Query: 414 AMIQLYKTHNI----NP---LAGCWPILLQIPVFFAIYKVI--SISLEMRHAPFWGWIKD 464
              Q  +        NP   + GC P+L+QIP+ F +Y  +    S  +   P + W   
Sbjct: 112 EAYQELQQLYQQHQLNPLTTMFGCLPMLIQIPILFGLYATLKWPTSGGILSYPTFMWFH- 170

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM- 523
           L + D                          I     F+Q  +S     K Q M+   M 
Sbjct: 171 LTSPDSMIAM---------------------IAGFMYFVQSWLSARQMPKEQRMMGYVMM 209

Query: 524 ---PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
              P+  ++     P+ L +YW  +  + I+Q
Sbjct: 210 IVSPLFILYIAFQSPSALALYWFVNAALLILQ 241


>gi|314935647|ref|ZP_07842999.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80]
 gi|313656212|gb|EFS19952.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80]
          Length = 280

 Score = 75.4 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 94/244 (38%), Gaps = 40/244 (16%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
           ++      ++    KPM  L+    +    N+G+AI++    ++L+  PL   Q  +   
Sbjct: 22  YKEAQHGLFYTVFVKPMDDLLHVLGHAFNENYGLAIIVIVFILRLILMPLMCIQVKNIHV 81

Query: 389 MK--------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQI 437
           ++         I    ++++E       +   K +++ Y  + INP   L G +PIL+QI
Sbjct: 82  IRGKTEVVKPEINKIQEKIKEAQSPEERRAANKLLMKKYNEYGINPFKNLIGTFPILIQI 141

Query: 438 PVFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           P+   +Y  I    S  +   P + W  +L   D                      I  I
Sbjct: 142 PILLGLYTSIKYPTSGGITQHPHFLWF-NLMHTD---------------------IIMTI 179

Query: 496 IMSLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           I ++  FIQ  ++     K +      ++   P+   +A     + L +YW+ S    I+
Sbjct: 180 IAAVMYFIQPLVNSIHYPKNERRSYYVMMVLSPLFITYASLHSASALSLYWAISATFLII 239

Query: 552 QQAV 555
           Q   
Sbjct: 240 QMHF 243


>gi|331083516|ref|ZP_08332628.1| hypothetical protein HMPREF0992_01552 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330404209|gb|EGG83757.1| hypothetical protein HMPREF0992_01552 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 424

 Score = 75.4 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 12/129 (9%)

Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           F     V++ + +  H         L  AD        G    +    +   + P++   
Sbjct: 203 FQGFADVLNQTADKLH--PMQNFLGLNIADNPWALIQSGWSTQHYLLILAAVLIPVLAWG 260

Query: 500 SMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
           +  + MK+          +P   +     +  +MP++  F   +FP G+ IYW    VI 
Sbjct: 261 TQVLNMKLVQTASNTSNGTPSQMEATMKTMNMFMPLMTAFICFTFPVGIGIYWIIGAVIR 320

Query: 550 IVQQAVIMK 558
            VQQ +I +
Sbjct: 321 SVQQIIINR 329



 Score = 59.2 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 78/148 (52%), Gaps = 10/148 (6%)

Query: 336 WGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
                ++A+ +  LM+  Y++ V N G+ I++ T+ +     PL  KQ         + P
Sbjct: 10  MPIVNWVAEVLGWLMNGIYSIGVHNLGLCIIIFTLVIYAFMTPLQIKQQKFAKMNAVMAP 69

Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           ++  +++K++    Q     +Q+  + +Y+ + ++P   C  +L+Q+P+FFA+Y+VI   
Sbjct: 70  ELQNIQKKYRGKKDQNSQLKMQEETMGVYEKYGVSPTGSCLQMLIQMPIFFALYQVI--- 126

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFG 478
             ++   + G IKD+ A+  ++I  + G
Sbjct: 127 --IKIPGYIGGIKDVFASAVSHITDVSG 152


>gi|313904721|ref|ZP_07838095.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium
           cellulosolvens 6]
 gi|313470514|gb|EFR65842.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium
           cellulosolvens 6]
          Length = 420

 Score = 75.4 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 46/120 (38%), Gaps = 12/120 (10%)

Query: 472 NIFTLFGILPFYLPGFMHVGI-WPIIMSLSMFIQMKMSPPPADKG---------QAMIL- 520
                 G     +   + VGI  PII   + +I MK+ P  A            Q   + 
Sbjct: 239 FHGIFSGTANSAMIFALIVGIAIPIIAWFTNWINMKLMPQQAQSSDGSDNSVAKQMNTMN 298

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
             MPV       SF  G+ IYW    V+ IVQQ +I +  G +I   + +R    KN   
Sbjct: 299 TIMPVFSAVLCISFNMGIGIYWIVGAVVRIVQQVIINRHIG-QIDTDEMIRKAEEKNRKK 357



 Score = 56.5 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 61/112 (54%), Gaps = 6/112 (5%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
           ++   +++++        N G+ I   T+ + ++  P+  KQ  S+  +  IQP++ +++
Sbjct: 22  WLMNGIYVVLDTVGW--ANTGLCIAFFTIIIYIVLTPIQIKQQKSSKVIAVIQPELQKIQ 79

Query: 401 EKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           +K++    Q  Q+      + LY  + ++P   C P+L+Q+P+ FA+Y+VI 
Sbjct: 80  KKYQGKKDQASQQKMSEETMALYAKYGVSPTGSCLPMLIQLPIMFALYQVIL 131


>gi|242003776|ref|XP_002422855.1| mitochondrial inner membrane protein OXA1L, putative [Pediculus
           humanus corporis]
 gi|212505737|gb|EEB10117.1| mitochondrial inner membrane protein OXA1L, putative [Pediculus
           humanus corporis]
          Length = 201

 Score = 75.4 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 31/181 (17%)

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
              +   ++  Q KI+E +              + +  KT  I  L    P   Q P+F 
Sbjct: 1   MQNNLPQIQGYQNKINEAKLTGNYYEVAHHVNELQEFMKTKQIGALGFFIPAFAQAPIFL 60

Query: 442 AIYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
           +++  +       +E        W  DL   DP                     + P+++
Sbjct: 61  SMFWGLRAMTNLPVESMKTGGLFWFTDLTVPDPYY-------------------VLPVMV 101

Query: 498 SLSMFIQMKMSPPPADKG---QAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           S + F  M+ +    +     Q +    +  ++PV+      +FPA L  YW+ SN+ S+
Sbjct: 102 SCTFFAIME-TGAEGNSMGTIQQIWLRYLFRFLPVILFPITMNFPAALQCYWTMSNLTSL 160

Query: 551 V 551
            
Sbjct: 161 G 161


>gi|315049391|ref|XP_003174070.1| inner membrane protein OXA1 [Arthroderma gypseum CBS 118893]
 gi|311342037|gb|EFR01240.1| inner membrane protein OXA1 [Arthroderma gypseum CBS 118893]
          Length = 485

 Score = 75.0 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/326 (12%), Positives = 105/326 (32%), Gaps = 49/326 (15%)

Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320
           S  I    ++ ++     S G  +   +F++   T     + T  +      +   +   
Sbjct: 41  SSLIGGNGSALNAIRTARSSGAIKISPRFASTAATPSAIDTATGESTTNTVPETITSGSD 100

Query: 321 YEKDLAIPRFEMLI-----------DWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTT 368
                ++   ++ +              + +  +  +  L+   +   G       +   
Sbjct: 101 ALSGGSLTDIDLSLIPEKIGYLKELGLDYGWGPSSMVQFLLETLHITGGLPWWGATVAAA 160

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKT 421
           V +++  F         +  +  I+P    +RE+      +         ++ +  L + 
Sbjct: 161 VLIRVALFKSILSASEVSGKLHAIKPLATPIRERMLHCARENDNVGALKAKQELSALNEQ 220

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLF 477
           H + P       L+Q+P+ F  ++V+     +      +    W+  +  +DP       
Sbjct: 221 HGVKPWKAFV-PLIQVPLGFGCFRVLRGMSALPVPGLDSESVLWLHSVTMSDPFY----- 274

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMK------MSPPPADKGQAMILNWMPVVFVFAL 531
                           P+  S  MF+ +K       S          +L  +P + +  +
Sbjct: 275 --------------ALPVATSAMMFLALKRGGDAGTSNLTNSPLGKAMLYGLPAITMATM 320

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIM 557
           S +P  L +Y+  +  +S+ Q  ++ 
Sbjct: 321 SFWPGILQLYFLTTGFLSMCQAYLMT 346


>gi|227489035|ref|ZP_03919351.1| hypothetical protein HMPREF0294_2185 [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227090980|gb|EEI26292.1| hypothetical protein HMPREF0294_2185 [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 397

 Score = 75.0 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 96/269 (35%), Gaps = 43/269 (15%)

Query: 347 FMLMSYFYNLVGNFGIAI--MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
              +     +  N    +  +   + V+ L  PLA K YVS      ++P +  L+E ++
Sbjct: 16  HTFLHGGLGVNENIAWILSFVGLIITVRSLIAPLAWKMYVSARRTAIMRPHMASLKEDYR 75

Query: 405 QSPPQVLQKA----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKV---ISISLEMRHAP 457
               +  Q        QL   H +NP+AGC P+L+Q PV   +Y++   I+         
Sbjct: 76  GKLDKESQAELSRKSQQLMDEHEVNPMAGCAPMLIQFPVILGLYRMVLRIARPEGGLGTS 135

Query: 458 FWGWIKDLAAADPTNIFT--LFGILPFYLPGF--------------MHVGIWPIIMSLSM 501
            +  +  L++AD  +      FG+                      +   I PI+++ + 
Sbjct: 136 PYPPVGFLSSADVGSFLETRAFGLPIAAYASMPEAQLNELGTTGDHLVHTITPIVIAATC 195

Query: 502 FIQMKMSPPPADKGQAM------------ILNWM----PVVFVFALSS--FPAGLIIYWS 543
           F+ + M        + M             + +     P + +    +   P  +I YW 
Sbjct: 196 FMTLNMILSTIRSFETMDWRSGFAVNVSFSMVFFAIYTPFMILTLAFNGPIPVAIIFYWF 255

Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
            +N  ++ Q  V+  M      L    + 
Sbjct: 256 VNNFWTMSQLIVLWTMLTVRHPLTPEFKE 284


>gi|320034138|gb|EFW16083.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 495

 Score = 75.0 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 98/254 (38%), Gaps = 40/254 (15%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390
             +   + +  +  +  L+   +   G       +   VF+++  F         +A ++
Sbjct: 123 KELGLDYGFGPSSLIETLLESIHIYAGLPWWGSTIAAAVFIRVALFKFNLNASDMSAKLR 182

Query: 391 NIQPKIDELREKFKQSPPQVLQKA------MIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
            +QP    L+E+  ++  +            + + +  +   +   +  +LQIP+ F  +
Sbjct: 183 RMQPITKPLQERMLKAVREGNNLEGLKLKQEMAMIREQHGVKMWKTFVPMLQIPLGFGFF 242

Query: 445 KVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
           +V+     +      +  + W+ D+  +DP                     I P++   S
Sbjct: 243 RVLRGMSSLPVPGLLSEQFLWLNDITLSDPFF-------------------ILPLVTGGS 283

Query: 501 MFIQMKMS-PPPAD----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           M+  +K       D         +L  +PV+   A+S +PA L +Y++ +++++++Q  +
Sbjct: 284 MYFAIKRGGETGMDFANSPLGKFMLYGLPVISTTAMSFWPAVLQLYFASTSLLALIQAYL 343

Query: 556 IM-----KMHGAEI 564
           +      K+ G E 
Sbjct: 344 VTSPGFRKLAGVEP 357


>gi|212704367|ref|ZP_03312495.1| hypothetical protein DESPIG_02422 [Desulfovibrio piger ATCC 29098]
 gi|212672226|gb|EEB32709.1| hypothetical protein DESPIG_02422 [Desulfovibrio piger ATCC 29098]
          Length = 125

 Score = 75.0 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 8/124 (6%)

Query: 1   MERNWNYFVAIALSVIIVYAWQN------FYVYPRIEEMNNERKNIQTVKQPNQVDNSYA 54
           M+   N  +AI L +++V  W        + V P   E+           Q  Q +    
Sbjct: 1   MQDGKNLIMAIVLCLLVVVGWSYLADYMGWVVKPDPAEIAKMEAAQAEQAQKAQAEAEAK 60

Query: 55  AVLIDDRAQALSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
                +   A + +P   V +  P     ++  G       L+ Y   +  +SP + ++ 
Sbjct: 61  QKAQAEPLPAFTPAPGVDVTVDAPLYKAVLHSGGGVLRSFELKKYTTGLDEDSPRINMVD 120

Query: 113 PSNT 116
           P   
Sbjct: 121 PQTA 124


>gi|119183245|ref|XP_001242683.1| hypothetical protein CIMG_06579 [Coccidioides immitis RS]
          Length = 495

 Score = 75.0 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 98/254 (38%), Gaps = 40/254 (15%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390
             +   + +  +  +  L+   +   G       +   VF+++  F         +A ++
Sbjct: 123 KELGLDYGFGPSSLIETLLESIHIYAGLPWWGSTIAAAVFIRVALFKFNLNASDMSAKLR 182

Query: 391 NIQPKIDELREKFKQSPPQVLQKA------MIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
            +QP    L+E+  ++  +            + + +  +   +   +  +LQIP+ F  +
Sbjct: 183 RMQPITKPLQERMLKAVREGNNLEGLKLKQEMAMIREQHGVKMWKTFVPMLQIPLGFGFF 242

Query: 445 KVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
           +V+     +      +  + W+ D+  +DP                     I P++   S
Sbjct: 243 RVLRGMSSLPVPGLLSEQFLWLNDITLSDPFF-------------------ILPLVTGGS 283

Query: 501 MFIQMKMS-PPPAD----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           M+  +K       D         +L  +PV+   A+S +PA L +Y++ +++++++Q  +
Sbjct: 284 MYFAIKRGGETGMDFANSPLGKFMLYGLPVISTTAMSFWPAVLQLYFASTSLLALIQAYL 343

Query: 556 IM-----KMHGAEI 564
           +      K+ G E 
Sbjct: 344 VTSPGFRKLAGVEP 357


>gi|224437585|ref|ZP_03658541.1| inner membrane protein [Helicobacter cinaedi CCUG 18818]
 gi|313144038|ref|ZP_07806231.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313129069|gb|EFR46686.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 317

 Score = 75.0 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 101/232 (43%), Gaps = 19/232 (8%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           ++ + + + + + +   +   +    N+G++I+L ++ ++L    L        A+   +
Sbjct: 4   ILYYIFIFPVEQVLEWALFTLFKATKNYGVSIILLSLIMQLFMLKLTFYFDKKAASFGAL 63

Query: 393 QPK-IDELREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIYKVIS 448
           + +   +++E  +      LQ  +  LYK  + +P   L G   + LQIP F A+   + 
Sbjct: 64  KAQCDSKIKEFKRVFKGAELQSYIRTLYKQKHFHPIFALFGLGGLALQIPFFIAMIH-LV 122

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
            + E   +  + WI DL+  D   +F L             + I P++M+    I +  S
Sbjct: 123 ENAEYLQSVRFLWIDDLSKPDSIMLFGL------------SIHILPLLMTAFTLINVFYS 170

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
               D      L    ++F+  L S P+ L++YW+ +   S++++    K H
Sbjct: 171 SKELDARVQGSLIA--LLFLVLLYSMPSALVLYWTCNMFFSLLKEIFKHKKH 220


>gi|302506228|ref|XP_003015071.1| mitochondrial export translocase Oxa1, putative [Arthroderma
           benhamiae CBS 112371]
 gi|291178642|gb|EFE34431.1| mitochondrial export translocase Oxa1, putative [Arthroderma
           benhamiae CBS 112371]
          Length = 484

 Score = 75.0 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 90/243 (37%), Gaps = 36/243 (14%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390
             +   + +  +  +  L+   +   G       + T V ++++ F         +A +K
Sbjct: 123 KELGLDYGWGPSSMVQFLLETLHITGGLPWWTATVATAVLIRVVLFNSIVSSAEVSAKLK 182

Query: 391 NIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            IQP+   +RE+      +         +  +  L + H I P       LLQIP+ F  
Sbjct: 183 AIQPRTTPIRERMMHCVRENDNVGALKAKNELALLNQEHGIKPWKAFL-PLLQIPLGFGC 241

Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--- 496
           ++V+     +           W++++   DP           + +P      I+  +   
Sbjct: 242 FRVLRGMSALPVPGLDNESVLWLQNVTMPDPY----------YAIPIATGALIFVALRRG 291

Query: 497 --MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
               LS  +  K+           ++  +P+V  F ++ +P  L +Y+  + V+S+ Q  
Sbjct: 292 GDTGLSNLMNSKLG--------KSVVYSLPIVTAFTMTFWPGILQLYFLTTGVLSVCQTY 343

Query: 555 VIM 557
           ++ 
Sbjct: 344 IMT 346


>gi|325663379|ref|ZP_08151829.1| hypothetical protein HMPREF0490_02570 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325470833|gb|EGC74063.1| hypothetical protein HMPREF0490_02570 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 421

 Score = 75.0 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 9/100 (9%)

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PADKGQAMI 519
           D      +  +    +   +   + PI+  L+ +I +K+ P          P       +
Sbjct: 233 DAPVNLMMDALKTGAILVAIVALLIPILSGLTQWINIKLMPQSPGMDDRENPMANSMKTM 292

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
              MP+  VF   + PAGL +YW +S +   VQQ  I K 
Sbjct: 293 NMIMPLFSVFMCFTMPAGLGLYWIFSAICRSVQQVAINKY 332



 Score = 49.2 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 4/97 (4%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412
           + N G+ I+L T+ +     PL  KQ   +     + P++  +++K+K    Q     +Q
Sbjct: 38  IENIGLCIILFTIIIYTFMIPLTIKQQKFSKLSAVMNPELQAIQKKYKNKRDQESMLKMQ 97

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           + M  +Y  +  + + GC  +++Q P+  A++KVI  
Sbjct: 98  EEMKMVYDKYGTSQMGGCLQLVIQFPILLALWKVIQN 134


>gi|325831899|ref|ZP_08164996.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1]
 gi|325486220|gb|EGC88672.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1]
          Length = 639

 Score = 74.6 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 29/207 (14%)

Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421
           +AI+L TV +K++  PL+     ++  M  I P+++ ++ K+     + + +    L K 
Sbjct: 1   MAILLFTVIIKIVLMPLSLWCQWNSIVMVKIMPELNRIKVKYFG-DAEAIGEKQTLLNKK 59

Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           H+ +PL    P+  QI V F + +VI              I D  A     +    G++P
Sbjct: 60  HHYHPLLSLIPLAAQILVLFGLVEVIHG------------ITDHGAPGTEFL----GMVP 103

Query: 482 FYLPGFMHVGIWPIIMSLSM----FIQMKMSPPP--ADKGQAMILNWMPVVF-VFALSSF 534
               G     I P++  LS     F Q +++P      K +    N + +V  +      
Sbjct: 104 IEDGGLSW--IMPLLAGLSAVVMGFAQNRINPLQREQSKMEKNTTNGLSIVLSLVLGVYV 161

Query: 535 PAGLIIYWSWSNVISIVQQA---VIMK 558
            AG+  YW  SN+++IV QA   +IM+
Sbjct: 162 AAGMAFYWICSNLMAIVVQALCNLIMR 188


>gi|323337853|gb|EGA79093.1| Oxa1p [Saccharomyces cerevisiae Vin13]
          Length = 354

 Score = 74.6 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 101/311 (32%), Gaps = 28/311 (9%)

Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321
             +  +       F+          A   +   T LP     T++     A     I + 
Sbjct: 24  TIVLPRPHPSWISFQAKRFNSTGPNANDVSEIQTQLPSIDELTSSAPSLSASTSDLIANT 83

Query: 322 EKDLA-----IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLF 375
            + +      I     +     +Y+ +  +  ++   +   G      I  TT+ ++ L 
Sbjct: 84  TQTVGELSSHIGYLNSIGLAQTWYWPSDIIQHVLEAVHVYSGLPWWGTIAATTILIRCLM 143

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-------LA 428
           FPL  K   + A   +I+P++D L  K   +      + +    K    +         A
Sbjct: 144 FPLYVKSSDTVARNSHIKPELDALNNKLMSTTDLQQGQLVAMQRKKLLSSHGIKNRWLAA 203

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
               I + +  F A+  + +  ++        W  DL  ADP     +     F     +
Sbjct: 204 PMLQIPIALGFFNALRHMANYPVDGFANQGVAWFTDLTQADPYLGLQVITAAVFISFTRL 263

Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
                          Q   SP         +   +P++ + A  +  + +++Y++++   
Sbjct: 264 ---------GGETGAQQFSSP------MKRLFTILPIISIPATMNLSSAVVLYFAFNGAF 308

Query: 549 SIVQQAVIMKM 559
           S++Q  ++   
Sbjct: 309 SVLQTMILRNK 319


>gi|268561842|ref|XP_002646541.1| Hypothetical protein CBG20396 [Caenorhabditis briggsae]
          Length = 325

 Score = 74.6 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 38/233 (16%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           W ++ +      +   +  +       I+ TT+ ++ L   +        A     + ++
Sbjct: 66  WSWWPSSYFRWALESMHMHLDIPWWLTIVATTITLRALLIGVPVMSQKLVAKQSMYRKEM 125

Query: 397 DELREKFKQSPPQVLQKAMI-------QLYKTHNINPLAGCWPILLQIPVF----FAIYK 445
           +E R++  ++  +  Q              ++ +I        +     VF    FAI K
Sbjct: 126 NEFRDRIDEARKENNQLLQQQILLEQRDFLRSKDIRLGRQFMVMAANGAVFATQFFAIKK 185

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
           +++++          W  DL A DP                       P I + +M +  
Sbjct: 186 MVAVNYPGLSEGGALWFTDLTATDPYY-------------------ALPFISAATMALVT 226

Query: 506 KM------SPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           K+      +           +++ +PVV     S F  GL +YW+ SN +S++
Sbjct: 227 KVGIEMGTTADQMPPVMRAFMSYGLPVVIFGVSSQFATGLCVYWTASNAVSLI 279


>gi|330841252|ref|XP_003292615.1| hypothetical protein DICPUDRAFT_157354 [Dictyostelium purpureum]
 gi|325077115|gb|EGC30849.1| hypothetical protein DICPUDRAFT_157354 [Dictyostelium purpureum]
          Length = 390

 Score = 74.6 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 105/303 (34%), Gaps = 27/303 (8%)

Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313
              + + +  I S     ++  K             +++ IT L   +   T+       
Sbjct: 21  FQSRSFINSTIKSTSFLNNTNNKITYKRSYSTDPNNNSSNITDLSSTTSNITDLSTNATN 80

Query: 314 EFPTIH--HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371
               I    Y K   I   E LI   +       + +L     N   ++   I    + +
Sbjct: 81  IVNGIKYADYVKTETISPDESLISAFFSKINFDNIEVLNGLHENYGLSWVAIIAGMALAL 140

Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ--VLQKAMIQLYKTHNINPLAG 429
           ++  FP+  +    +A M+ ++ + ++       +      L +   Q+ K +N++PL+ 
Sbjct: 141 RVTTFPVTLRTQRISAKMRMVRLETEKHGYLNDGTTEGRLKLMQLQQQIMKKYNVSPLSA 200

Query: 430 CWPILLQIPVF---FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486
             P L+ +P+    F I + IS    +     + W   L+A DP                
Sbjct: 201 IGPNLVLLPLLIYPFLIIRQISDHTTLLDNTSFLWADSLSAVDPYY-------------- 246

Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
                + PI+ S    +  + +            +  + V+ +     F AGL +YW  +
Sbjct: 247 -----LLPILSSAFQLLSTRFTLTADTHPLMKGFMYSISVLPLLFTIHFSAGLNVYWCTN 301

Query: 546 NVI 548
           +++
Sbjct: 302 SIL 304


>gi|282851361|ref|ZP_06260726.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus gasseri
           224-1]
 gi|282557329|gb|EFB62926.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus gasseri
           224-1]
          Length = 271

 Score = 74.6 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 92/245 (37%), Gaps = 30/245 (12%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
               +  F    + + + + +        G AI++ T  V+L+  PL           + 
Sbjct: 40  YAWVFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99

Query: 392 IQPKIDELREKFKQ---------SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
              K+    +  ++              + +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKDNNMSMMGGMGCLPLLIQLPIM 159

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S E+  + F+G                   +       +   I  ++  + 
Sbjct: 160 IGIYQAVAYSKELAASSFFG-------------------ISLGQRSIVLTIIATLLYVIQ 200

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
            ++ M   P    K   M L   P +  F   S P  L +Y+    +I+I+QQ +   + 
Sbjct: 201 GYLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQVITTFII 260

Query: 561 GAEIG 565
             ++ 
Sbjct: 261 MPKVK 265


>gi|255324091|ref|ZP_05365215.1| putative membrane protein [Corynebacterium tuberculostearicum
           SK141]
 gi|255298792|gb|EET78085.1| putative membrane protein [Corynebacterium tuberculostearicum
           SK141]
          Length = 314

 Score = 74.6 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 112/278 (40%), Gaps = 35/278 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
            +     P+  +M +++ L+ +       + I+I+L  + V+ +  PL      S     
Sbjct: 1   MYEVFMYPVSGIMKFWHWLISSFVGESTAWLISIILLVITVRGVVVPLNWISVRSARIGA 60

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            I+P+ + ++++   +        ++Q    L K++N NP AGC P L+ IP F  +Y+V
Sbjct: 61  LIRPENNRIKKQMNSATTTEEMAELMQEEKNLMKSYNYNPAAGCVPPLIMIPAFIGLYQV 120

Query: 447 I--SISLEMRHAPFWGWIK--DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM- 501
           +    ++E R +   G +   D++A   T  +           G +   I    ++ +M 
Sbjct: 121 LLRMSNIE-RGSTTVGMLNASDVSAFRETTFYGAPLTDFAREHGDLINPILIAAIAFTMA 179

Query: 502 --FIQMKMSPPPADKGQA------MILNWMPVVFVFALSSF------PAGLIIYWSWSNV 547
              I +  S       Q       +++ ++ +V  F L         P  +I+YW  + +
Sbjct: 180 NSVISLVRSFRTTQFDQKVNRRVFILMGFLLLVIPFFLWHLAQTGPIPVAIILYWGCAYL 239

Query: 548 ISIVQQA----VIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             ++Q A    ++ + +     +    R +  +    +
Sbjct: 240 FMLIQTAIFEIILHRDYPLTEDVHAMRRESIRRWRKRE 277


>gi|297194184|ref|ZP_06911582.1| membrane protein [Streptomyces pristinaespiralis ATCC 25486]
 gi|297152155|gb|EFH31560.1| membrane protein [Streptomyces pristinaespiralis ATCC 25486]
          Length = 245

 Score = 74.3 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 16/210 (7%)

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS--PPQVLQKAMIQLYKTHNINPL 427
            V+L   PL++           + P++ ELR K+  +    + LQKA ++LY    ++PL
Sbjct: 34  LVRLAVHPLSRAAARGQKARTRLAPQLAELRVKYGSNAKDAERLQKATMELYAREKVSPL 93

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT--LFGILPFYLP 485
           +GC P LLQ+P FF +Y + S + E+   P       L  A     +T  L     F   
Sbjct: 94  SGCLPSLLQLPAFFLMYHLFSNA-EIGGEPNGLLGHALFDAPLGGRWTDALADGGMFGGA 152

Query: 486 GFMHVGIWPIIMSLSMFI------QMKMSPPPADKGQAM--ILNWMPVVFVFALSS---F 534
           G ++V ++ I+ +++ F       QM  +P   ++   M  +   +P++  F L++    
Sbjct: 153 GLVYVALFVIVAAVATFTYRRTKRQMAAAPMTGEQMPGMVAMTKVVPLLSFFTLATVAVV 212

Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           P    +Y   S   + V++  + +     +
Sbjct: 213 PLAAALYVVTSTTWTAVERVFLYRDTPMPV 242


>gi|283768633|ref|ZP_06341545.1| membrane protein insertase, YidC/Oxa1 family [Bulleidia extructa
           W1219]
 gi|283105025|gb|EFC06397.1| membrane protein insertase, YidC/Oxa1 family [Bulleidia extructa
           W1219]
          Length = 303

 Score = 74.3 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 79/278 (28%), Gaps = 26/278 (9%)

Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371
           AK    +            +       F +    +   +S    + G   +  ++    +
Sbjct: 32  AKGNVILITNNTTFQYIFEKESWFSAIFVWPLAWLINHLSMIIGVGGAIALVTIVIHALL 91

Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431
                               +     +       S    + +    L K ++++P +   
Sbjct: 92  AAFTSKSQVAMQRMQLIQPELNKIQRKYEGVSTDSARMKMVQEQQALMKKYDVHPGSMML 151

Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491
              LQ P+  A++  I  +  +    F G I                 L       +   
Sbjct: 152 VQFLQFPIVMAMFFAIQRAESVAKGSFLGMIL------QVTPMKGLQQLIAGNMASLSYI 205

Query: 492 IWPIIMSLSMFIQMKM-------------------SPPPADKGQAMILNWMPV-VFVFAL 531
           I  I+M  S F  +K+                           Q +++ +M V +     
Sbjct: 206 ILFILMLGSQFALIKLPLILQKKKAEAEAKKHHRRPEEVGGGSQQVMMQYMMVGMIAIFG 265

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
            ++ +G+  YW   N++ IV+  ++ K    +  +  R
Sbjct: 266 FTWFSGMSYYWFIRNIVDIVKTLIVQKKIDEQKPVGGR 303


>gi|241896112|ref|ZP_04783408.1| Oxa1 family cytochrome oxidase biogenesis protein [Weissella
           paramesenteroides ATCC 33313]
 gi|241870626|gb|EER74377.1| Oxa1 family cytochrome oxidase biogenesis protein [Weissella
           paramesenteroides ATCC 33313]
          Length = 315

 Score = 74.3 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 92/260 (35%), Gaps = 46/260 (17%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
              +                  V   G +I++ T+ V+L+  P+   Q  +    +    
Sbjct: 22  HADFLKSPLTDFMNWSESTIGGVNAVGWSIIILTLAVRLILLPMMVHQQRNATIQQEKMR 81

Query: 395 KIDELREKFKQSPPQVLQKA--------MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444
            +    +K + +      +         M+ +Y+ +N++ L G     +++Q P+F  +Y
Sbjct: 82  LLQPQLKKVQDAQKNAQTQEEQLLASQAMMTIYRENNVSLLGGMNFTTLIIQWPIFMGLY 141

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
             I  S E+ HA F+G   +L++                     H  I  I  +++  IQ
Sbjct: 142 SAIRYSNEIAHASFFG--INLSS---------------------HAPILAIATAVAYGIQ 178

Query: 505 MKMSPPPADKGQAM-------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             +S       Q         ++  M +   +  +   AG+ +Y+    ++ I+Q  +I+
Sbjct: 179 AYLSIIGVPAEQKKQMQMMMYVMPVMMLFMTWVTN---AGIALYFFAGALVMILQTLIII 235

Query: 558 KMHGAEIGLIDRLRSTFSKN 577
                   L   +  TF   
Sbjct: 236 ---VWRPKLKAHVAETFEVK 252


>gi|168334920|ref|ZP_02693040.1| 60 kDa inner membrane insertion protein [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 407

 Score = 74.3 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 16/104 (15%)

Query: 471 TNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQMKMSPPPADK--------------- 514
             IF L       +        I P++   S FI  K+S   +                 
Sbjct: 215 YFIFNLVDSPSQIVASGNYFAFIIPLLAGASTFIFSKISMSQSQPAANKNANGQPNQAEG 274

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
               +   MP++      + P GL +YW   N+I + QQ  + K
Sbjct: 275 MMKTMNIIMPIMMGSISYTVPYGLALYWIAGNLIMMGQQVFVAK 318



 Score = 43.4 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 4/96 (4%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412
           VG  GIAI+L T F +LL  PL  KQ  +T  M  IQP++ ++++K+     Q       
Sbjct: 25  VGTLGIAIILFTFFTRLLLTPLQIKQQRTTRGMSKIQPEMQKIQQKYAGRKDQQSQLAQS 84

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           + M  LYK +NINP AGC P+L+Q+P+ +A+Y V+ 
Sbjct: 85  QEMQALYKKYNINPWAGCLPLLIQLPLIYALYAVLR 120


>gi|38234912|ref|NP_940679.1| putative inner membrane protein translocase component YidC
           [Corynebacterium diphtheriae NCTC 13129]
 gi|38201177|emb|CAE50901.1| Putative integral membrane protein [Corynebacterium diphtheriae]
          Length = 317

 Score = 74.3 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 57/280 (20%), Positives = 106/280 (37%), Gaps = 62/280 (22%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++ +++ +V          ++ +AI+L T  ++ L       Q  S   
Sbjct: 1   MLNFIYWPISAILWFWHKVVSFVLDPGSGLSWVLAIVLLTFTIRALLVKPMLNQMRSMRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QP + E+R+K+     Q L +   +L K   +NP+AGC P+L+Q+PVF  ++ V+ 
Sbjct: 61  MQELQPLMQEIRKKYPN-DQQKLMEETRKLQKEMGVNPVAGCLPVLVQMPVFIGLFHVLR 119

Query: 449 IS---------------LEMRHAPFWGWIKD-------------LAAA--DPTNIFTLFG 478
                            +    A +     D             L+A    P  ++  F 
Sbjct: 120 SFNRTGTGTGQLGLSPEVNRETANYIFSAADVQSFLDARLFGVPLSAFISMPKEMYQAFQ 179

Query: 479 ILPFYLPGFMHVGI-WPIIMSLSMFIQMKMSPPPADK-----GQA--------------- 517
            + F       V     +I+ L+     ++S            Q                
Sbjct: 180 PVDFTRTDIALVAAPLIVIIVLATHFNARLSVDRQKARRESGLQKPPANDQMQMQMDMMN 239

Query: 518 -MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            M+L +MP+  +F    +  GL+ Y   +N+ +  QQ  I
Sbjct: 240 RMMLWFMPLTILFTGVLWHLGLLFYMVSNNIWTFFQQRWI 279


>gi|319442315|ref|ZP_07991471.1| putative inner membrane protein translocase component YidC
           [Corynebacterium variabile DSM 44702]
          Length = 342

 Score = 74.3 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 100/293 (34%), Gaps = 46/293 (15%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
            +I++     +      L     + V ++ + I+L  V V+L+  P A +   S+  + N
Sbjct: 2   QIIEYPVSLVMKAWHVFLTWLGMDAVSSWPLTIVLLVVTVRLILLPFAYRALYSSRMLIN 61

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           ++P +  L  ++K    +   +  +     L +        GC P L+QIP F  +Y+++
Sbjct: 62  LRPALHALEVEYKGVKDRDRIREKMAKRKQLQQDGGYRMRDGCLPALIQIPFFLGLYRIL 121

Query: 448 -----SISLEMRHAPFWGWI--KDLAAADPTNIFTL------------FGILPFYLPGFM 488
                   LE       G +   D+       +F +            F  L        
Sbjct: 122 LTVSRPTDLESGTHQSIGALNGTDVGQFLQAEVFGVPLPAYSVMTDERFDFLGTSSSEVF 181

Query: 489 HVGIWPIIMSLSMFIQM---------KMSPPPADKGQAMILNWM----PVVFVF-----A 530
           H+   P+ +  S+              M+          +  +M    PV+ +F      
Sbjct: 182 HI-ALPLCLIASVLTTSNTAYSLKRNWMTLDEDSAVARGLFKFMVLLLPVMLIFPLAFGL 240

Query: 531 LSSFPAGLIIYWSWSNVISIVQ----QAVIMKMHGAEIGLIDRLRSTFSKNYN 579
               P  ++ YW  +N+ ++ Q    Q ++ +        +   +   ++   
Sbjct: 241 AGPAPVAIMCYWVMNNLWTVAQSVTLQLIMDRKAPYTEEFLAHRKEIGARRKQ 293


>gi|315650198|ref|ZP_07903273.1| stage III sporulation protein J [Eubacterium saburreum DSM 3986]
 gi|315487555|gb|EFU77863.1| stage III sporulation protein J [Eubacterium saburreum DSM 3986]
          Length = 417

 Score = 74.3 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/336 (12%), Positives = 100/336 (29%), Gaps = 27/336 (8%)

Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318
           +A +        F      +      +    +   I +   +  +         +    I
Sbjct: 17  FAEILGFIMNLIFDIGITNIGIAIIVFTIVINVIMIPLTIKQQKSQKLMTVIQPEI-KAI 75

Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378
               K        M ++       +K    +      L+    I   L  V  ++  +  
Sbjct: 76  QDKYKGKTDNESAMKMNAETRAVYSKYGTSMTGGCLPLLIQMPILFGLYQVIYRIPAYVT 135

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ-- 436
           + +          +Q      +        ++  ++         I+ L    P      
Sbjct: 136 SVRGVFENVANSLMQQPDYINKISDMAKAVRLPVESNDYTITNKVIDLLYKFTPEKWTKL 195

Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-IWPI 495
              F ++  V++ S+ +          DL+ A            P+     +++  I PI
Sbjct: 196 GETFPSMNDVLNTSVPLIKQMNSFLGIDLSVA------------PWQGMNHINIAWIIPI 243

Query: 496 IMSLSMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
           +  ++ F+  K+          +     K    +   MP++ VF   + PAG+ IYW  S
Sbjct: 244 LAGVTQFLSTKVMTVNQPQSSGNESDMAKQMQSMNTVMPLMSVFFCFTLPAGIGIYWIAS 303

Query: 546 NVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            +   + Q ++      ++ +   + +  +K    +
Sbjct: 304 ALARTIIQLLVN-YQLKDMDIDKLVENNLAKQNAKR 338



 Score = 51.1 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 4/129 (3%)

Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384
           + I            +F     F++   F   + N GIAI++ T+ + ++  PL  KQ  
Sbjct: 1   MDIVLLTKSSTPIIGWFAEILGFIMNLIFDIGITNIGIAIIVFTIVINVIMIPLTIKQQK 60

Query: 385 STANMKNIQPKIDELREKF----KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
           S   M  IQP+I  +++K+           +      +Y  +  +   GC P+L+Q+P+ 
Sbjct: 61  SQKLMTVIQPEIKAIQDKYKGKTDNESAMKMNAETRAVYSKYGTSMTGGCLPLLIQMPIL 120

Query: 441 FAIYKVISI 449
           F +Y+VI  
Sbjct: 121 FGLYQVIYR 129


>gi|42526944|ref|NP_972042.1| inner membrane protein [Treponema denticola ATCC 35405]
 gi|41817259|gb|AAS11953.1| inner membrane protein [Treponema denticola ATCC 35405]
          Length = 916

 Score = 74.3 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 16/197 (8%)

Query: 359 NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           N GI+I+L ++ + ++  P+     + Q    A  K ++ KI +++  FK     ++   
Sbjct: 31  NIGISIVLLSLGINIICLPMYNVAEQWQEKERAIQKKMKAKITDIKAVFKGDERYLMLST 90

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474
             +    H +  L   + + +QIP F A YK++S S  M     + +  DL + D     
Sbjct: 91  YYRQNNYHPLYALRSMFALFIQIPFFIAAYKLLSDSPIMA-KSSFLFFTDLGSPDK---- 145

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534
                      G + V I PIIM+L       +     +    + L    ++F+  L + 
Sbjct: 146 -------LLSLGNISVNILPIIMTLINISASAVYTKGLELKDKLTLYITALIFLLLLYNS 198

Query: 535 PAGLIIYWSWSNVISIV 551
           P+GL+ YW+ +N+ S++
Sbjct: 199 PSGLVFYWTLNNLFSLL 215


>gi|223042607|ref|ZP_03612656.1| membrane protein OxaA 1 [Staphylococcus capitis SK14]
 gi|222444270|gb|EEE50366.1| membrane protein OxaA 1 [Staphylococcus capitis SK14]
          Length = 273

 Score = 74.3 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 40/243 (16%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           ++    KPM  L+ +   L   N+G+AI++  + V+ +  PL   Q  +   M+     +
Sbjct: 31  FYNLFVKPMDSLLHFLGRLFNDNYGLAIIVIVLIVRFILLPLMVIQVKNMHMMREKTNVV 90

Query: 397 DE--------LREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIYK 445
                     +++   Q       + +++ YK++ INP   + GC+P+++QIP+   +Y 
Sbjct: 91  KPELDAIREKIKKADTQEERNAANQLLMKKYKSYGINPFKNMIGCFPVIIQIPILMGLYM 150

Query: 446 VI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
            +    S  +   P + W  +L   +                      I  II +   FI
Sbjct: 151 SLKYPTSDGITKYPHFLWF-NLTEPN---------------------LIMTIIAASMYFI 188

Query: 504 QMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           Q  ++     K Q      I+   P+   +A  +  + L +YWS S    IVQ  +    
Sbjct: 189 QPLVNSIHYPKDQRKTYYVIMVVSPIFITYASLTSASALGLYWSISAAFLIVQMHLAHSY 248

Query: 560 HGA 562
           +G 
Sbjct: 249 YGK 251


>gi|254389837|ref|ZP_05005061.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294812826|ref|ZP_06771469.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|326441223|ref|ZP_08215957.1| hypothetical protein SclaA2_09156 [Streptomyces clavuligerus ATCC
           27064]
 gi|197703548|gb|EDY49360.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294325425|gb|EFG07068.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
          Length = 245

 Score = 73.9 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 91/226 (40%), Gaps = 15/226 (6%)

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           +     L      AI++ T  V+L   PL++           + P++ ELREK   +P  
Sbjct: 14  LLQPLFLGSATAAAIVVFTALVRLAVHPLSRAAARGQKASARLAPRVAELREKHGGNPE- 72

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAAA 468
            L++ +  LY     +P+AGC P LLQ+P FF +Y  +  S ++   P        LAA 
Sbjct: 73  RLRRELADLYAKERTSPVAGCLPSLLQLPAFFVLYH-LFSSADIGGEPNELLHHTLLAAP 131

Query: 469 --DPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MI 519
             D        G +L      ++ +     +++   + + +       + Q        +
Sbjct: 132 LGDRWTDAVGGGEVLNGAGAVYLVLFAIVTVVAAVNYRRTRKQMAAGPQLQTAAPGMGAM 191

Query: 520 LNWMPVVFVFALSS---FPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
           + ++P++    L +    P    +Y   S   S V++ V+ +   A
Sbjct: 192 MRFLPLLSFATLITVAVVPLAAALYVVTSTTWSAVERIVLYRDLPA 237


>gi|38234809|ref|NP_940576.1| putative inner membrane protein translocase component YidC
           [Corynebacterium diphtheriae NCTC 13129]
 gi|38201073|emb|CAE50797.1| Putative integral membrane protein [Corynebacterium diphtheriae]
          Length = 435

 Score = 73.9 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 88/265 (33%), Gaps = 41/265 (15%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
             EM I                 +  +    +  ++    V V+ +  P +  Q+ S   
Sbjct: 1   MLEMFIYPVSGVMRLWHYIFADLFGCSQSQAWVASLFALVVTVRSIIAPFSWMQFKSGRF 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGCWPILLQIPVFFAIY 444
              ++PKI  L+E++ +   +           ++ + +  +  AGC P L+Q+PVF  +Y
Sbjct: 61  AIMMRPKIKRLKEEYAERTDKESILEQERRQKEIQEEYGYSMAAGCVPALIQVPVFLGLY 120

Query: 445 KVISISLEMR-------HAPFWGWIKD----------LAAADPTNIFTLFGILPFYLPG- 486
           +V+      +       H P      D               P         L       
Sbjct: 121 QVLLRMARPKEGLDATVHEPIGMLTSDNVRSFLDTRFFGVPLPAYNSMSPEQLAHLGTDQ 180

Query: 487 -FMHVGIWPIIMSLSMFIQMKMSPPPA--------DKGQAMILNWMPVVFVF-------- 529
             +H  + P+I++  +F  + M             D   A+ +    +V V         
Sbjct: 181 PTIHAFVLPLIIAACVFTTINMIVSTLRTRYSIDHDSEFAVGMYRFLIVMVLVAPIGLLQ 240

Query: 530 --ALSSFPAGLIIYWSWSNVISIVQ 552
                  PA + +YW  +N+ +++Q
Sbjct: 241 TGIFGPIPAAICLYWVANNLWTLIQ 265


>gi|294155969|ref|YP_003560353.1| 60 kDa inner membrane protein [Mycoplasma crocodyli MP145]
 gi|291600137|gb|ADE19633.1| 60 kDa inner membrane protein [Mycoplasma crocodyli MP145]
          Length = 630

 Score = 73.9 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 98/263 (37%), Gaps = 37/263 (14%)

Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374
              I  + +   +  F  LI +   Y        L            I +++      LL
Sbjct: 365 QKPITTWSESWGLGPFYGLIVYPISYVSQALRQSLPDLSGWSTIFVIIIVVVIIKAFSLL 424

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV--LQKAMIQLYKTHNINPLAGCWP 432
               +        +++  + +I+   + F  +       Q+ + +LYK +NINPL     
Sbjct: 425 ITFKSIVGQSIQEDLRGKKAQIEAKYKDFGNNKMMKARKQQELQKLYKKNNINPLDQFLS 484

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +++ +P+FFA+++VI    E++   + G             F+       +   + ++GI
Sbjct: 485 VIVSMPIFFAMWRVIQCMPEIKSTIWLG-----------LNFSSTSYSSLFAGQWQYLGI 533

Query: 493 WPIIMSLSMFIQM-------------KMSPP------PADKGQAMILNWMPVVFVFALSS 533
             I + +   +               ++S         ++K Q +++    +VF+     
Sbjct: 534 IVIAVGV-QLVSQILPRLLNRRRLKERISIAENEALKKSEKTQRIVM----IVFLVITLM 588

Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556
           F AG+ +YW  + + +I Q   I
Sbjct: 589 FTAGVQVYWIITGLWTIGQTIGI 611


>gi|227543308|ref|ZP_03973357.1| inner membrane protein translocase component YidC [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227180921|gb|EEI61893.1| inner membrane protein translocase component YidC [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 372

 Score = 73.9 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 97/269 (36%), Gaps = 43/269 (15%)

Query: 347 FMLMSYFYNLVGNFGIAI--MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
              +     +  N    +  +   + V+ L  PLA K YVS      ++P +  L+E ++
Sbjct: 17  HTFLHGGLGVNENIAWILSFVGLIITVRSLIAPLAWKMYVSARRTAIMRPHMASLKEDYR 76

Query: 405 QSPPQVLQKA----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKV---ISISLEMRHAP 457
               +  Q        QL   H +NP+AGC P+L+Q PV   +Y++   I+         
Sbjct: 77  GKLDKESQAELSRKSQQLMDEHEVNPMAGCAPMLIQFPVILGLYRMVLRIARPEGGLGTS 136

Query: 458 FWGWIKDLAAADPTNIFT--LFGILPFYLPGF--------------MHVGIWPIIMSLSM 501
            +  +  L++AD  +      FG+                      +   I PI+++ + 
Sbjct: 137 PYPSVGFLSSADVGSFLETRAFGLPIAAYASMPEAQLNELGTTGDHLVHTITPIVIAATC 196

Query: 502 FIQMKM------SPPPADK------GQAMILNWM----PVVFVFALSS--FPAGLIIYWS 543
           F+ + M      S    D         +  + +     P + +    +   P  +I YW 
Sbjct: 197 FMTLNMILSTIRSFETMDWRSGFAVNMSFSMVFFAIYTPFMILTLAFNGPIPVAIIFYWF 256

Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
            +N  ++ Q  V+  M      L    + 
Sbjct: 257 VNNFWTMSQLIVLWTMLTVRHPLTPEFKE 285


>gi|314934498|ref|ZP_07841857.1| SpoJ family protein [Staphylococcus caprae C87]
 gi|313652428|gb|EFS16191.1| SpoJ family protein [Staphylococcus caprae C87]
          Length = 273

 Score = 73.9 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 40/243 (16%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           ++    KPM  L+ +   L   N+G+AI++  + V+ +  PL   Q  +   M+     +
Sbjct: 31  FYNLFVKPMDSLLHFLGRLFNDNYGLAIIVIVLIVRFILLPLMVIQVKNMHMMREKTNVV 90

Query: 397 DE--------LREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIYK 445
                     +++   Q       + +++ YK++ INP   + GC+P+++QIP+   +Y 
Sbjct: 91  KPELDAIREKIKKADTQEERNAANQLLMKKYKSYGINPFKNMIGCFPVIIQIPILMGLYM 150

Query: 446 VI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
            +    S  +   P + W  +L   +                      I  II +   FI
Sbjct: 151 SLKYPTSDGITKYPHFLWF-NLTEPN---------------------LIMTIIAASMYFI 188

Query: 504 QMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           Q  ++     K Q      I+   P+   +A  +  + L +YWS S    IVQ  +    
Sbjct: 189 QPLVNSIHYPKDQRKTYYVIMVVSPIFITYASLTSASALGLYWSISAAFLIVQMHLAHSY 248

Query: 560 HGA 562
           +G 
Sbjct: 249 YGK 251


>gi|306834795|ref|ZP_07467859.1| membrane protein OxaA [Corynebacterium accolens ATCC 49726]
 gi|304569323|gb|EFM44824.1| membrane protein OxaA [Corynebacterium accolens ATCC 49726]
          Length = 304

 Score = 73.9 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 94/266 (35%), Gaps = 60/266 (22%)

Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
                 + +AI+L T  +K L       Q  S+  M+ IQPK+ E+R K+         +
Sbjct: 3   PAWGITWILAIVLLTWTLKALMVKPTVSQIRSSRKMQEIQPKVQEIRAKY-GKDQARAAQ 61

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEMRHAPFWGWIKDLAAADP 470
            M ++YK   + P+AGC P+L+QIP+F  ++ V+     ++ +         + ++  D 
Sbjct: 62  EMQKVYKDAGVRPMAGCLPVLVQIPMFIGLFHVLRSFDRTVSVAGGFGHPSGEPMSIEDN 121

Query: 471 TNIFTLFGILPFYLPGFMHVGIW------------PIIMSLSMFIQ-------------- 504
            N        P  +  F+   I+            P++  ++   Q              
Sbjct: 122 ANTANYIFK-PELVQQFLDAKIFGVPLVTNLRLNSPLVEGVTTTTQAAFIIVPMIAVIVV 180

Query: 505 -------MKMSPPPADKGQAMI----------------------LNWMPVVFVFALSSFP 535
                  M ++     + Q                         L  MP + +F+   +P
Sbjct: 181 LMHFNARMSLNRQEKRRAQGKTSAPQGQNAEMMQQQMAMMSKMMLWVMPAMLIFSGFIWP 240

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHG 561
            GL+ Y   + V +  Q  +I     
Sbjct: 241 IGLLFYMLSNTVWTFFQTRIIYGKMD 266


>gi|227502237|ref|ZP_03932286.1| inner membrane protein translocase component YidC [Corynebacterium
           accolens ATCC 49725]
 gi|227077061|gb|EEI15024.1| inner membrane protein translocase component YidC [Corynebacterium
           accolens ATCC 49725]
          Length = 327

 Score = 73.5 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 54/290 (18%), Positives = 101/290 (34%), Gaps = 67/290 (23%)

Query: 338 WFYFIAKPMFMLMSYFYN---------LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++ +++              + +AI+L T  +K L       Q  S+  
Sbjct: 1   MLNFIYWPISAVLWFWHWLLSLVMDPAWGITWILAIVLLTWTLKALMVKPTVAQIRSSRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ IQPK+ E+R K+         + M ++YK   + P+AGC P+L+QIP+F  ++ V+ 
Sbjct: 61  MQEIQPKVQEIRAKY-GKDQARAAQEMQKVYKDAGVRPMAGCLPVLVQIPMFIGLFHVLR 119

Query: 449 -------ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-------P 494
                  ++  + H        +  A     IF    +  F       V +        P
Sbjct: 120 SFDRTVSVAGGLGHPSGEPMSIEANANTANYIFKPELVQQFLDAKIFGVPLVTNLRLNSP 179

Query: 495 IIMSLSMFIQ---------------------MKMSPPPADKGQAMI-------------- 519
           ++  ++   Q                     M ++     + Q                 
Sbjct: 180 LVEGVTTTTQAAFIIVPMIAVIVVLMHFNARMSLNRQEKRRAQGKTSAPQGQNAEMMQQQ 239

Query: 520 --------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
                   L  MP + +F+   +P GL+ Y   + V +  Q  +I     
Sbjct: 240 MAMMSKMMLWVMPAMLIFSGFIWPIGLLFYMLSNTVWTFFQTRIIYGKMD 289


>gi|317495530|ref|ZP_07953898.1| YidC/Oxa1 family membrane protein insertase [Gemella moribillum
           M424]
 gi|316914344|gb|EFV35822.1| YidC/Oxa1 family membrane protein insertase [Gemella moribillum
           M424]
          Length = 284

 Score = 73.5 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 100/265 (37%), Gaps = 47/265 (17%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----- 391
            ++    KPM + +S  ++ VG++G +I++ T+ ++++  P   K Y S    +      
Sbjct: 15  TFYETFVKPMDISLSKIHDYVGSWGWSIVIITLIIRIIILPFMLKNYKSQNEARRGQALA 74

Query: 392 ------IQPKIDELREK-----------FKQSPPQVLQKAMIQLYKTHNINPLA--GCWP 432
                 +Q K    REK             ++    LQ+  + + K +N  PL   GC P
Sbjct: 75  RPELEVVQAKQKAAREKEARAISNEEKTQARAELMELQREQMAIMKKYNAMPLTVGGCLP 134

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +L+Q+P    ++  +S    +  A            D T +    G+       ++   I
Sbjct: 135 LLIQMPFLTGLFFTLSNP--LYSAGII---------DSTFL----GVFSLGTRSYILPVI 179

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMIL-------NWMPVVFVFALSSFPAGLIIYWSWS 545
             I+ ++   + M+M+P     GQ  +           PV+           + +Y+   
Sbjct: 180 AFIVYAIQTRLAMRMTPQVTQPGQEQLQGQMQMMQWLSPVMIAVFSFWVAGAVAVYYIVG 239

Query: 546 NVISIVQQAVIMKMHGA-EIGLIDR 569
            V  I Q  +  K++   +     +
Sbjct: 240 GVFLIFQTYLGYKIYPPYKPEKQKK 264


>gi|213400725|gb|ACJ47011.1| hypothetical protein [Wolbachia endosymbiont of Coptotermes
           acinaciformis]
          Length = 171

 Score = 73.5 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 60/164 (36%), Positives = 93/164 (56%), Gaps = 2/164 (1%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282
            D  L E  Y D+ K  +     S  +W G +DKYW +  IP K    +   K+ + +  
Sbjct: 8   FDNKLEEWTYKDVAKKHLIKTSTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNI 67

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
            ++Q  F     +ILPG S++  N+ FAGAK+   +  Y+  L IP F+  +D+G  YFI
Sbjct: 68  DKFQVDFVKPYKSILPGTSVSNVNYFFAGAKKLNLLDSYKSTLGIPLFDKAVDFGVLYFI 127

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            KP+F+L+ YF+ ++ NFG+AI+L T+ +KLL   L+ + YVS 
Sbjct: 128 TKPVFLLLEYFHFVLKNFGLAILLLTLVIKLLMLTLSNRSYVSM 171


>gi|163814992|ref|ZP_02206379.1| hypothetical protein COPEUT_01145 [Coprococcus eutactus ATCC 27759]
 gi|158449675|gb|EDP26670.1| hypothetical protein COPEUT_01145 [Coprococcus eutactus ATCC 27759]
          Length = 444

 Score = 73.5 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 19/124 (15%)

Query: 463 KDLAAA-DPTNIFT--LFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSP-------- 509
            DLA+  D  +     LFG+     PG+      I PI  +L  F+Q K+S         
Sbjct: 218 ADLASYVDQFHNMNQFLFGLNIADAPGWKLSIALIVPIASALLQFLQTKISMKSSQNSNM 277

Query: 510 ----PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI--MKMHGAE 563
                 A+     ++ +MPV+ +    + P  + +YW   +VI I+ Q ++     H  +
Sbjct: 278 DSNQQTANNMMKGMMYYMPVMSLIFCITLPIAIGLYWIVGSVIMIISQLIVDAYYNHQDK 337

Query: 564 IGLI 567
             L+
Sbjct: 338 DELL 341



 Score = 55.8 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 4/115 (3%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           F +I   +  + S+      N  + ++L T  ++   FPL  KQ  S+  M  IQP+I +
Sbjct: 22  FNWIYMFVGFIGSHMGFTYVNLSVCVILFTFVLRGALFPLYFKQQRSSKIMSFIQPEIAK 81

Query: 399 LREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
             +K+K    Q      Q+   ++ K + ++  +GC   L+Q+P+F+ +Y+VI  
Sbjct: 82  ATKKYKGKTDQESMMKQQQETQKIQKKYGVSMASGCLTSLIQLPIFYGLYRVIQN 136


>gi|330916229|ref|XP_003297342.1| hypothetical protein PTT_07706 [Pyrenophora teres f. teres 0-1]
 gi|311330036|gb|EFQ94560.1| hypothetical protein PTT_07706 [Pyrenophora teres f. teres 0-1]
          Length = 488

 Score = 73.5 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/244 (11%), Positives = 80/244 (32%), Gaps = 32/244 (13%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLL 374
            +  +   +     +           A     + S +     +    +A+   T  ++ +
Sbjct: 92  RLIDHVGQMKEMGLDYGYGMTTLMEQAIETIYISSGWGWAGSIMAAAVAVRCATFALQAM 151

Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434
                          K +Q K++    +  +    + +    ++ K +    L+    ++
Sbjct: 152 SSDKMAVMASLGPVTKPLQDKMEAAIARGDKQGADMYRMQQQEVIKPYVGGMLSMTGFMV 211

Query: 435 LQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
           +Q  + F+ ++++    E+         + W  DL++ DP                    
Sbjct: 212 VQGWIGFSAFRLLRAMSELPIPGMTQDGFLWFADLSSRDPYF------------------ 253

Query: 491 GIWPIIMSLSMFIQMKM------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
            + P+  +  M+   K+      +P  A+  Q +++ +M        +   A + +Y+  
Sbjct: 254 -VLPVATTAIMYSVFKLGGETGVNPSQAN-TQKIMMTFMAFALGAVTAFQAAAIQLYFLT 311

Query: 545 SNVI 548
           S ++
Sbjct: 312 SAIL 315


>gi|254578882|ref|XP_002495427.1| ZYRO0B11132p [Zygosaccharomyces rouxii]
 gi|238938317|emb|CAR26494.1| ZYRO0B11132p [Zygosaccharomyces rouxii]
          Length = 389

 Score = 73.5 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 82/243 (33%), Gaps = 27/243 (11%)

Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAK 380
           E    +     +     +++ A  +   +   +   G      I + T+ V+LL FP   
Sbjct: 79  EASNHVGYLNSIGLAQTWWWPADVIQHALELVHVYSGLPWWGSICVVTITVRLLMFPFYV 138

Query: 381 KQYVSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNIN---PLAGCWPI 433
           K   + A   +I+P++D+L  +   +      Q +     +L   + I      A    I
Sbjct: 139 KSSDTVARNSHIKPQMDKLNAELMSTTDLAEGQKVALKRKRLLAENGIKNRWMAAPILQI 198

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
            + +  F  I  + +  ++        W  DL+ ADP                 +  G+ 
Sbjct: 199 PVALGFFGGIRHMANFPVDGFTNQGIAWFTDLSQADPY-----------LGLQVITAGVL 247

Query: 494 PII--MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
                +      Q              +   +P++ + A  +  A + +Y++ +   +++
Sbjct: 248 IGFSRLGGETGAQQW------SPVMKRVFTIIPLISIPATMNVSAAVALYFAVNGTCAVI 301

Query: 552 QQA 554
           Q  
Sbjct: 302 QTL 304


>gi|86606439|ref|YP_475202.1| inner membrane protein translocase component YidC [Synechococcus
           sp. JA-3-3Ab]
 gi|86554981|gb|ABC99939.1| inner membrane protein OxaA [Synechococcus sp. JA-3-3Ab]
          Length = 392

 Score = 73.5 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 6/115 (5%)

Query: 471 TNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVF 527
             I  L  +  F   G +H  I    ++  +S+++   ++     D  Q+ +    PV+F
Sbjct: 251 LFIDKLGRVGAFDPDGTIHWDIIGMIVLFGVSIYLNQSLTNAGQEDPSQSSMARITPVLF 310

Query: 528 VFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
                 FP  AG+++Y   SN+   VQ  ++ +       L   +     +   +
Sbjct: 311 SAMFLFFPLPAGVLLYILVSNIFQTVQTFLLSR-EPLPENLQQLVEEERRRAAQA 364



 Score = 63.1 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 70/121 (57%), Gaps = 5/121 (4%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN-- 391
           +D+G  +     M  ++ +FY +V ++G+AI+  T+ ++   +PL      +   MK   
Sbjct: 1   MDFGVGFLSNNVMLPILDFFYGIVPSYGLAIIFLTLVIRFALYPLNVGSIRNMRRMKVIN 60

Query: 392 --IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
             +Q ++ E++EK++   PQ L++A  +LY    +NPL GC P+L+Q+PV FA++  +  
Sbjct: 61  PLMQRRMREIQEKYRD-DPQKLREAQAKLYSELGVNPLGGCLPLLIQMPVLFALFATLRG 119

Query: 450 S 450
           S
Sbjct: 120 S 120


>gi|326469022|gb|EGD93031.1| hypothetical protein TESG_00588 [Trichophyton tonsurans CBS 112818]
 gi|326480652|gb|EGE04662.1| hypothetical protein TEQG_03529 [Trichophyton equinum CBS 127.97]
          Length = 484

 Score = 73.5 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 87/244 (35%), Gaps = 38/244 (15%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390
             +   + +  +  + +L+   +   G       +   V ++++ F         +  +K
Sbjct: 123 KELGLDYGWGPSSMIQLLLETLHITGGLPWWTATVAAAVLIRVVLFNSIVSAADVSTKLK 182

Query: 391 NIQPKIDELREKFKQSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            + P+   +RE+  +             ++ +  L + H I P       LLQ+P+ F  
Sbjct: 183 ALSPRTTPIRERMMRCVRENDNVGAMKAKQELASLNQEHGIKPWKAFI-PLLQVPLGFGC 241

Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           ++V+     +      +    W++ +   DP                     + P+    
Sbjct: 242 FRVLRGMSALPVPGLDSESVLWLQSVTMPDPFF-------------------VMPVATGA 282

Query: 500 SMFIQMK------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            MF+ +K      MS          ++  +P+V V  ++ +P  L +Y+  +  +S+ Q 
Sbjct: 283 LMFVALKRGGDVGMSNLMNSALGKGMVYGLPIVTVCTMTFWPGILQLYFLTTGALSVCQT 342

Query: 554 AVIM 557
            ++ 
Sbjct: 343 YIMT 346


>gi|6321002|ref|NP_011081.1| Oxa1p [Saccharomyces cerevisiae S288c]
 gi|730247|sp|P39952|OXA1_YEAST RecName: Full=Mitochondrial inner membrane protein OXA1; AltName:
           Full=Cytochrome oxidase biogenesis protein OXA1;
           AltName: Full=Oxidase assembly protein 1; Flags:
           Precursor
 gi|521092|emb|CAA52465.1| PET 1402 [Saccharomyces cerevisiae]
 gi|603394|gb|AAB64681.1| Oxa1p [Saccharomyces cerevisiae]
 gi|832918|emb|CAA54675.1| OXA1 [Saccharomyces cerevisiae]
 gi|51013715|gb|AAT93151.1| YER154W [Saccharomyces cerevisiae]
 gi|151944872|gb|EDN63131.1| cytochrome oxidase activity [Saccharomyces cerevisiae YJM789]
 gi|190405713|gb|EDV08980.1| inner membrane protein OXA1, mitochondrial precursor [Saccharomyces
           cerevisiae RM11-1a]
 gi|256272066|gb|EEU07078.1| Oxa1p [Saccharomyces cerevisiae JAY291]
 gi|259146083|emb|CAY79343.1| Oxa1p [Saccharomyces cerevisiae EC1118]
 gi|285811787|tpg|DAA07815.1| TPA: Oxa1p [Saccharomyces cerevisiae S288c]
 gi|323309318|gb|EGA62536.1| Oxa1p [Saccharomyces cerevisiae FostersO]
 gi|323333812|gb|EGA75203.1| Oxa1p [Saccharomyces cerevisiae AWRI796]
 gi|323355337|gb|EGA87162.1| Oxa1p [Saccharomyces cerevisiae VL3]
          Length = 402

 Score = 73.5 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 101/311 (32%), Gaps = 28/311 (9%)

Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321
             +  +       F+          A   +   T LP     T++     A     I + 
Sbjct: 24  TIVLPRPHPSWISFQAKRFNSTGPNANDVSEIQTQLPSIDELTSSAPSLSASTSDLIANT 83

Query: 322 EKDLA-----IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLF 375
            + +      I     +     +Y+ +  +  ++   +   G      I  TT+ ++ L 
Sbjct: 84  TQTVGELSSHIGYLNSIGLAQTWYWPSDIIQHVLEAVHVYSGLPWWGTIAATTILIRCLM 143

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-------LA 428
           FPL  K   + A   +I+P++D L  K   +      + +    K    +         A
Sbjct: 144 FPLYVKSSDTVARNSHIKPELDALNNKLMSTTDLQQGQLVAMQRKKLLSSHGIKNRWLAA 203

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
               I + +  F A+  + +  ++        W  DL  ADP     +     F     +
Sbjct: 204 PMLQIPIALGFFNALRHMANYPVDGFANQGVAWFTDLTQADPYLGLQVITAAVFISFTRL 263

Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
                          Q   SP         +   +P++ + A  +  + +++Y++++   
Sbjct: 264 ---------GGETGAQQFSSP------MKRLFTILPIISIPATMNLSSAVVLYFAFNGAF 308

Query: 549 SIVQQAVIMKM 559
           S++Q  ++   
Sbjct: 309 SVLQTMILRNK 319


>gi|298246693|ref|ZP_06970498.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter
           racemifer DSM 44963]
 gi|297549352|gb|EFH83218.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter
           racemifer DSM 44963]
          Length = 296

 Score = 73.1 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 95/243 (39%), Gaps = 37/243 (15%)

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
              P+F  +   Y  +G+F +A+++ TV + +L  PL  +Q       + +QP+I  LR 
Sbjct: 12  FTYPIFNALLLLYAWLGDFSLALVVLTVSISVLLLPLTLRQIRQGRITRRLQPEIQALRR 71

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS------------- 448
           ++         +A+ +LYK + I   +    +L+Q P++  +Y  ++             
Sbjct: 72  RYASDRL-AQTRALQELYKAYGIRTSSTFLLLLIQAPIYSGLYFALNMILQAPLVADINR 130

Query: 449 ---------ISLEMRHAPFWG-----WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
                     SL   H  ++      W   L A DPT I  L   L   L  ++   +  
Sbjct: 131 YLYPFVVHVTSLPNLHLTWFTVLNATWHISLGAPDPTAILPLLTGLLTLLQTWLTQPLAA 190

Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF-ALSSFPAGLIIYWSWSNVISIVQQ 553
           +          + +     +    +L  +P          F AGL +Y   S +++I QQ
Sbjct: 191 VEA--------RDTMQHVSQNMQWLLLLLPAAMTVLIAWHFAAGLALYRVVSLLMNIGQQ 242

Query: 554 AVI 556
            ++
Sbjct: 243 YIV 245


>gi|213400721|gb|ACJ47009.1| hypothetical protein [Wolbachia endosymbiont of Litomosoides
           sigmodontis]
          Length = 171

 Score = 73.1 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 58/161 (36%), Positives = 90/161 (55%), Gaps = 2/161 (1%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282
            D  L E  Y +I K  +     S  +W G +DKYW +  IP +    +   K+ S +G 
Sbjct: 8   FDNKLEEWTYKNIAKKHLIKTSTSKKNWFGFADKYWLTAIIPEESDKTNVSIKHTSANGI 67

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
            ++Q  F+     IL G S +  N+ FAGAK+   + +Y+  L IP F+  +D+G  YFI
Sbjct: 68  DKFQVDFAKPRKNILSGTSASNVNYFFAGAKKLNLLDYYKSILNIPLFDKAVDFGVLYFI 127

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
            KP+F+L+ YF  ++ NFG+AI+L T+ +KL   PL+ K +
Sbjct: 128 TKPVFLLLEYFNFVLRNFGLAILLLTLVIKLFMLPLSNKSH 168


>gi|302912042|ref|XP_003050625.1| hypothetical protein NECHADRAFT_48589 [Nectria haematococca mpVI
           77-13-4]
 gi|256731562|gb|EEU44912.1| hypothetical protein NECHADRAFT_48589 [Nectria haematococca mpVI
           77-13-4]
          Length = 481

 Score = 73.1 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 94/290 (32%), Gaps = 33/290 (11%)

Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324
           P   +          +  A   A+  A+  T  P    T  +         P I + E+ 
Sbjct: 97  PVTPSETIEATSATVNDAAGIPAEAVADVTTAEPTAVTTDFDLEAIANLASPNILNMEEK 156

Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQY 383
           L    F   I   + +     M   + + +      +G +I+ T + ++++ F    +  
Sbjct: 157 LG---FLHEIGLDYGWGPTSMMQWALEHVHVYSGLGWGGSIIATALILRVIMFYPQVRSL 213

Query: 384 VSTANMKNIQ--------PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435
              A M+ ++          + +   +          + + ++ +       +G     +
Sbjct: 214 RFNAAMQQMKKDPRGQEAMDLVKKGYQSGDREMLQKGQFLNKMVREQYGAKNSGMLWSFV 273

Query: 436 QIPVFFAIYKVISISL-----EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
           QIP  F ++++IS  +      M +A  + W  DL A+DP  +    G            
Sbjct: 274 QIPFSFGLFRIISGMVHIPVPSMENAG-FLWFTDLTASDPYFLLPALGTS---------- 322

Query: 491 GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
               ++    M +  K +P         ++     V     +   AG+ +
Sbjct: 323 ----LLFGA-MAVNAKYTPASQKAMMKKMMWVFGTVGFIGTTFLSAGVNL 367


>gi|154285426|ref|XP_001543508.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150407149|gb|EDN02690.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 499

 Score = 73.1 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 109/308 (35%), Gaps = 42/308 (13%)

Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325
                F+S                S + +   P  S   +  L + A          +  
Sbjct: 71  PSSARFNSTATTPMPPSD-PATSVSVDTVLDTPISSGAQSFDLLSAADLASV--DISRIP 127

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI-MLTTVFVKLLFFPLAKKQYV 384
               +   +   + +  ++ +  ++  F+   G       + T VF+++L    A     
Sbjct: 128 EKLGYLKAVGLDYGWGPSRVIETILESFHIYGGLPWWGAAIGTAVFLRVLVLKFAMDASD 187

Query: 385 STANMKNIQPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437
           ++A + +++     L+E+ ++          Q  Q+    + +THNI  L   +  L+Q+
Sbjct: 188 TSAKVASVKHLTQPLQEEVQRCYRENDTVGMQRAQQERKIINETHNIKLLKLAF-PLVQV 246

Query: 438 PVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           P+ F  ++V+     +      +  + W+ ++   DP                     I 
Sbjct: 247 PLSFGAFRVLRGMSALPVPGLDSESFLWLHNVTLHDPYF-------------------IL 287

Query: 494 PIIMSLSMFIQMKM---SPPPADKGQAM---ILNW-MPVVFVFALSSFPAGLIIYWSWSN 546
           PI   + M    K+   +    D    M   I+ + +PV+     S  P  L ++++ ++
Sbjct: 288 PITTGVVMHYTFKLGGETAGANDPTTMMAKPIMLYGLPVLSAICTSFLPGILQMFFATTS 347

Query: 547 VISIVQQA 554
           V++I Q  
Sbjct: 348 VLAIGQSY 355


>gi|239636059|ref|ZP_04677073.1| putative membrane protein [Staphylococcus warneri L37603]
 gi|239598330|gb|EEQ80813.1| putative membrane protein [Staphylococcus warneri L37603]
          Length = 270

 Score = 73.1 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 100/241 (41%), Gaps = 40/241 (16%)

Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----I 392
           ++    +PM  L+  F  L   N+G+AI+   + V+ +  P    Q  +   M+     +
Sbjct: 30  FYNTFVQPMDRLLHLFGRLFNDNYGLAIIAIVLIVRFILLPFMLIQVKNMHIMREKTKVV 89

Query: 393 QPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYK 445
           QP+ID++REK K++  Q       + ++  YK + INP     GC P+++QIP+   +Y 
Sbjct: 90  QPQIDKIREKIKEADSQEERNAANQLLMNKYKQYGINPFKNIIGCLPVIIQIPILMGLYM 149

Query: 446 VI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
            +    S  +   P + W  +L   +                      +  +I +L  FI
Sbjct: 150 SLKYPSSDGITKYPRFLWF-NLTEPN---------------------IMMTLIAALMYFI 187

Query: 504 QMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           Q  ++     K +      ++   P+   +A     + L +YWS S    I+Q     + 
Sbjct: 188 QPLVNSIHYPKDERKTYYVMMILSPIFITYASLHSASALGLYWSVSAAFLIIQMHFAHRH 247

Query: 560 H 560
           +
Sbjct: 248 Y 248


>gi|227547696|ref|ZP_03977745.1| inner membrane protein translocase component YidC [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227080222|gb|EEI18185.1| inner membrane protein translocase component YidC [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 377

 Score = 73.1 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 106/283 (37%), Gaps = 42/283 (14%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKN 391
              +     +    ++L   F     N  +A ++L  V +++L  PL    Y +   +  
Sbjct: 4   AFVYPVSAVMKFWHWLLAGVFGMESSNSWVASVVLLVVTIRVLIAPLQWYTYKTARVLVL 63

Query: 392 IQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           ++P++  +  ++         Q   +A  +L+K +N NPLAGC P L+QIP F  +Y+++
Sbjct: 64  MRPRMAAIEAQYGDEITPENVQAHARARKELHKEYNYNPLAGCLPALIQIPFFLGLYRLL 123

Query: 448 -----SISLEMR--------HAPFWGWIKDLAAADPTNIFTL---FGILPFYLPGFMHVG 491
                  S + R            +     L    P  +      F  L   L     + 
Sbjct: 124 LWMAVPSSSDGRSLGVLSPAEVESFRETTLLGVPLPAYVSMTPEQFAHLGTTLADVRTLA 183

Query: 492 IWPIIMSL--SMF---IQMKMSPPPADKGQAM-------ILNWMPVV-----FVFALSSF 534
           I  +I ++  +     +    S    D G A+       +   +P+V             
Sbjct: 184 IPMLIAAVCFTTLNLVLSQIRSRSTLDWGSAVAHRSYAFVWALVPIVVLGLAIAGLTGLV 243

Query: 535 PAGLIIYWSWSNVISIVQQ----AVIMKMHGAEIGLIDRLRST 573
           P  L++YW   N+++++Q      ++++++  +      +   
Sbjct: 244 PVALLLYWVSGNILTLIQTIVLWYLMVRIYPLDDDHRAHISEK 286


>gi|325093752|gb|EGC47062.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
          Length = 496

 Score = 73.1 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 109/308 (35%), Gaps = 42/308 (13%)

Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325
                F+S             A    + +   P  S   +  L + A          +  
Sbjct: 68  PSSARFNSTATTPIPPSD-PTASVPVDSVLDAPISSGAQSIDLLSAADLANV--DISQIP 124

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI-MLTTVFVKLLFFPLAKKQYV 384
               +   +   + +  ++ +  ++  F+   G       + T VF+++L    A     
Sbjct: 125 EKLGYLKAVGLDYGWGPSRVIETILESFHIYGGLPWWGAAIGTAVFLRILVLKFAMDASD 184

Query: 385 STANMKNIQPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437
           ++A + +++     L+E+ ++          Q  Q+    + +THNI  L   +  L+Q+
Sbjct: 185 TSAKVASVKHLTQPLQEEVQRCYRENDTAGMQRAQQERKIINETHNIKLLKLAF-PLVQV 243

Query: 438 PVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           P+ F  ++V+     +      +  + W+ ++   DP                     I 
Sbjct: 244 PLSFGAFRVLRGMSALPVPGLDSESFLWLHNVTLHDPYF-------------------IL 284

Query: 494 PIIMSLSMFIQMKM---SPPPADKGQAM---ILNW-MPVVFVFALSSFPAGLIIYWSWSN 546
           PI   + M    K+   +    D    M   I+ + +PV+     S  P  L ++++ ++
Sbjct: 285 PIATGVVMHYTFKLGGETAGANDPTTMMAKPIMLYGLPVLSAICTSFLPGILQMFFATTS 344

Query: 547 VISIVQQA 554
           V++I Q  
Sbjct: 345 VLAIGQSY 352


>gi|223983638|ref|ZP_03633816.1| hypothetical protein HOLDEFILI_01097 [Holdemania filiformis DSM
           12042]
 gi|223964405|gb|EEF68739.1| hypothetical protein HOLDEFILI_01097 [Holdemania filiformis DSM
           12042]
          Length = 289

 Score = 72.7 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 84/240 (35%), Gaps = 22/240 (9%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +F F    +   ++ +  +  +  I  +L  +   +                  +     
Sbjct: 57  FFVFPLAKLVNFLTPYVGVALSVSIVTLLVHLITLVFTIKSTVMTQKMQVIQPEMNRITK 116

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           +   K  +       + M +LYK + INP        +Q+P+  A+Y  +  +  + +  
Sbjct: 117 KYEGKTDERSQMAQAQEMQRLYKENGINPFGAIISSFIQLPIIMAVYMSVQRAESVVNGT 176

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
            WG    L+  +      L G++       +      I    SM +   ++   A K  A
Sbjct: 177 MWG----LSLKET----PLHGVMSGQWLYLVLFVFMAICQIGSMMLPQFLATQKAKKEAA 228

Query: 518 --------------MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                          ++ +M V  +    ++PA + IYW+ S+++ I +   +  ++  +
Sbjct: 229 AHHKKYEKTKQPGGNMMIYMMVFILVISVNWPAAMTIYWAVSSLVMIFKTLFVQFIYIDK 288


>gi|153811980|ref|ZP_01964648.1| hypothetical protein RUMOBE_02373 [Ruminococcus obeum ATCC 29174]
 gi|149831879|gb|EDM86965.1| hypothetical protein RUMOBE_02373 [Ruminococcus obeum ATCC 29174]
          Length = 331

 Score = 72.7 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 12/94 (12%)

Query: 499 LSMFIQMKMSPPP-----------ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
            +  + +K+ P                    +   MP++  F   +FP GL IYW  S+V
Sbjct: 167 ATQMLNLKLMPQAATQNGNNDNNAMASSMKTMNTVMPLMSAFFCFTFPVGLGIYWIASSV 226

Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +  +QQ +I + H  ++ + D +     K    +
Sbjct: 227 VRSIQQLLINR-HLNKMNIDDLVNENMKKMEAKR 259


>gi|260588821|ref|ZP_05854734.1| membrane protein OxaA [Blautia hansenii DSM 20583]
 gi|260540600|gb|EEX21169.1| membrane protein OxaA [Blautia hansenii DSM 20583]
          Length = 415

 Score = 72.7 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 12/129 (9%)

Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           F     V++ + +  H         L  AD        G    +        + P++   
Sbjct: 194 FQGFADVLNQTADQLH--PMQNFLGLNIADNPWALIQSGWSTQHYLLIFAAVLIPVLAWG 251

Query: 500 SMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
           +  + MK+          +P   +     +  +MP++  F   +FP G+ IYW    VI 
Sbjct: 252 TQVLNMKLVQTASNTSNGTPSQMETTMKTMNTFMPLMTAFICFTFPVGIGIYWIIGAVIR 311

Query: 550 IVQQAVIMK 558
            VQQ VI +
Sbjct: 312 SVQQVVINR 320



 Score = 59.2 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 78/148 (52%), Gaps = 10/148 (6%)

Query: 336 WGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
                ++A+ +  LM+  Y++ V N G+ I++ T+ +     PL  KQ         + P
Sbjct: 1   MPIVNWVAEVLGWLMNGIYSIGVHNLGLCIIIFTLVIYAFMTPLQIKQQKFAKMNAVMAP 60

Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           ++  +++K++    Q     +Q+  + +Y+ + ++P   C  +L+Q+P+FFA+Y+VI   
Sbjct: 61  ELQNIQKKYRGKKDQNSQLKMQEETMGVYEKYGVSPTGSCLQMLIQMPIFFALYQVI--- 117

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFG 478
             ++   + G IKD+ A+  ++I  + G
Sbjct: 118 --IKIPGYIGGIKDVFASAVSHITDVSG 143


>gi|39940712|ref|XP_359893.1| hypothetical protein MGG_04884 [Magnaporthe oryzae 70-15]
 gi|145010889|gb|EDJ95545.1| hypothetical protein MGG_04884 [Magnaporthe oryzae 70-15]
          Length = 521

 Score = 72.7 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 78/245 (31%), Gaps = 47/245 (19%)

Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK------ 390
           + +  +      + + +      +  AI+   +  +L+    +   +V    ++      
Sbjct: 184 FGWGPSSMAQWGIEHLHVWGSMPWWAAILGYAIVTRLMLLKPSIDAFVQQRKLQALKKDP 243

Query: 391 -----NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
                  +            +     +  + +L +   I+      P+ +Q+P+   +++
Sbjct: 244 RGKAAFDKMSQMMSGGSSSTTELLAARADVQRLQRAVGISTWKIALPM-IQMPIGIGVFR 302

Query: 446 VISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501
           V S   ++         + W+ DL + DP                     I P+  +  M
Sbjct: 303 VTSACADLPVPSFETGGFMWLMDLTSPDPFY-------------------ILPLASAGMM 343

Query: 502 FIQ----MKMSPPPADKGQAMIL----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
           ++     MKMSP   D  Q  +       +  +         A L +Y+  S  +   Q 
Sbjct: 344 YVMLQHSMKMSP---DASQTAMFKAVQYVLTPISFLVSLKLNAALQLYFIASAGLQAAQT 400

Query: 554 AVIMK 558
            ++ +
Sbjct: 401 LILSR 405


>gi|169854710|ref|XP_001834029.1| inner membrane protein OXA1L [Coprinopsis cinerea okayama7#130]
 gi|116504929|gb|EAU87824.1| inner membrane protein OXA1L [Coprinopsis cinerea okayama7#130]
          Length = 413

 Score = 72.7 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 86/228 (37%), Gaps = 38/228 (16%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQ 412
           +   I+  +   + +  P A     ++  ++  QP+I + RE+   +         Q   
Sbjct: 144 WFYTIIAGSALWRFVCVPFALSNIRNSTKLRPFQPQILQARERMTAAQTKRDAIELQRAS 203

Query: 413 KAMIQLYKTHNINPLAGC-WPILLQIPV----FFAIYKVISISLE------------MRH 455
             M ++Y    ++P  G   P+  Q+P+    FFA+ ++  + +E            +  
Sbjct: 204 VEMKKVYSEAGVSPFTGMILPMFAQLPITIGMFFALKRMAQLPVEQMKESGVAINLDLPW 263

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
                W+ DL  ADPT +             F  +    I +          +P      
Sbjct: 264 TGPISWLSDLTVADPTYLL---------PAAFCGLINLQIAVGAREMDTS--NPSAGHLM 312

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
              +   + V+ ++ +SSFP GL +    ++ ++IVQ  ++ +  G  
Sbjct: 313 --NVFRGLSVLTIYFMSSFPQGLFLGLLTTSGLTIVQSLLL-RSDGVR 357


>gi|256787512|ref|ZP_05525943.1| membrane protein [Streptomyces lividans TK24]
 gi|289771409|ref|ZP_06530787.1| membrane protein [Streptomyces lividans TK24]
 gi|289701608|gb|EFD69037.1| membrane protein [Streptomyces lividans TK24]
          Length = 237

 Score = 72.7 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 17/211 (8%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L T  V+LL  PL++           +QP+I ELR K  ++P + LQ+A+++L+    
Sbjct: 28  IILFTALVRLLVHPLSRAAARGQKARTRLQPRIAELRRKHAKNPEK-LQRAVLELHAEEK 86

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF-GILPF 482
           ++PL+GC P L QIP FF +Y + S S     A      + LAA         F      
Sbjct: 87  VSPLSGCLPSLCQIPAFFLLYHLFSSSTIGGEANGLLSHQLLAAPLGGRWADAFGDGGLL 146

Query: 483 YLPGFMHVGIWPIIMSLSMFIQ--MKMSP------PPAD----KGQAMILNWMPVVFVFA 530
              G ++V ++ ++  ++ F     + +       P  D     G   +   MP +  F 
Sbjct: 147 GGAGLVYVALFAVVAGVATFSYRLTRRTMADRPVLPAGDAGAVPGVGALTRVMPFMSFFT 206

Query: 531 LSS---FPAGLIIYWSWSNVISIVQQAVIMK 558
           L +    P    +Y   S   S V++AV+ +
Sbjct: 207 LVTVAVVPLAAALYVVTSTTWSAVERAVLYR 237


>gi|160893416|ref|ZP_02074201.1| hypothetical protein CLOL250_00965 [Clostridium sp. L2-50]
 gi|156864811|gb|EDO58242.1| hypothetical protein CLOL250_00965 [Clostridium sp. L2-50]
          Length = 465

 Score = 72.7 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 12/86 (13%)

Query: 489 HVGIWPIIMSLSMFIQMKMSP------------PPADKGQAMILNWMPVVFVFALSSFPA 536
              I PI+ ++  F+  K+S               A+    M+   MP++ +F   + P 
Sbjct: 273 AALIVPILSAVLQFVSSKISMSASNTNSNDPTAAQANSMMNMMTYGMPLMSLFICINLPI 332

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGA 562
            + +YW   +VI+I+ Q +I   +  
Sbjct: 333 AIGLYWIIGSVITIITQLIINNYYKK 358



 Score = 55.8 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 4/115 (3%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           F  + K + ++ +       N  I ++L T F++   FPL  KQ  S+  M  IQP+I++
Sbjct: 22  FDLMYKLIELISNSMGIGYVNLSICVILFTFFIRACLFPLNFKQQKSSKIMSFIQPEINK 81

Query: 399 LREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
             +K+     Q      Q+   ++ K + ++  +GC P L+Q+PVF+ +Y+VI  
Sbjct: 82  ATKKYNNKTDQESLMKKQQETQKIQKKYGVSLTSGCLPTLIQLPVFYGLYRVIQN 136


>gi|227834243|ref|YP_002835950.1| putative preprotein translocase subunit [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227455259|gb|ACP34012.1| putative preprotein translocase subunit [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 342

 Score = 72.7 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 101/277 (36%), Gaps = 37/277 (13%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVST 386
            +         P+  +M  ++ L  +       + + I+   + V+ +  PL        
Sbjct: 11  KEKAMISIFMYPVSGIMKLWHLLFSSFLDGSMAWILTIVFLVLTVRGIIAPLNWLSVKQG 70

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
                I+P++ +L E+  Q+              +L K    NP  GC+PI L  P F  
Sbjct: 71  RIGALIRPEMTKLEEQLNQADSVEEAVTILTQQRELNKRFQHNPAVGCFPIFLITPAFIG 130

Query: 443 IYKVISISLEMRHAPF-WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501
           +Y+V+       + P     + D+++   + +   FG+         H  I P++++  +
Sbjct: 131 LYQVVLRVSGSTNEPVGMLTLDDVSSFRNSTV---FGVPLTDFAREHHDLILPMLLAALV 187

Query: 502 FIQ---------MKMSPPPADKGQAMILNWMPVV---FVFALSSF------PAGLIIYWS 543
           F             ++     K    +L +M ++     + L S       P  +I YW 
Sbjct: 188 FTSLNTLITLYRSYLTTRFDQKIPRRLLWFMALMVILIPWMLWSVAWNGPIPVTIIFYWG 247

Query: 544 WSNVISIVQQ----AVIMKMHGAEIGLIDRLRSTFSK 576
            + + +++Q      ++ + +     + +  R +  +
Sbjct: 248 CTYLFTLLQTLVYEFILRRRYPLPEAVHELRRESIRR 284


>gi|296817105|ref|XP_002848889.1| inner membrane protein OXA1 [Arthroderma otae CBS 113480]
 gi|238839342|gb|EEQ29004.1| inner membrane protein OXA1 [Arthroderma otae CBS 113480]
          Length = 478

 Score = 72.3 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/322 (11%), Positives = 105/322 (32%), Gaps = 46/322 (14%)

Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318
           + S  I   +T+  +     S G  ++  +F++   T      +              ++
Sbjct: 39  FRSRLIGQNDTALSAVRPARSSGPLKFSPRFASTTATTSASTPVVENATSATDTLSGGSL 98

Query: 319 HHYEKDLAIPRFEMLIDW--GWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLF 375
              +      +   L +    + +  +  +  L+   +   G       +   V ++   
Sbjct: 99  TDIDLSRIPEKIGYLKELGLDYGWGPSAMVEFLLETLHITAGLPWWGATVAAAVLIRAAL 158

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLA 428
           F         +  +  I+P    +RE+  +   +         ++ +  L + + + P  
Sbjct: 159 FKSILSASEISGKLHKIKPLATPIRERMLKCARESDNVGALKAKQELALLNEKYGVKPWK 218

Query: 429 GCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484
                L+Q+P+ F  ++V+     +      +    W+  +  +DP              
Sbjct: 219 SFV-PLIQVPLGFGCFRVLRGMSALPVPGLDSESVLWLPTVTMSDPYF------------ 265

Query: 485 PGFMHVGIWPIIMSLSMFI---------QMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535
                  + P+  S  M++            ++         M+L  +P + +  +S +P
Sbjct: 266 -------VLPVATSAMMYLALKRGGDAGTSNLNNT---PLGRMMLYGLPGITMATMSFWP 315

Query: 536 AGLIIYWSWSNVISIVQQAVIM 557
             L +Y+  +  +S+ Q  ++ 
Sbjct: 316 GILQLYFLTTGFLSMCQAYLVT 337


>gi|149249002|ref|XP_001528841.1| hypothetical protein LELG_05767 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146453330|gb|EDK47586.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 397

 Score = 72.3 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 99/292 (33%), Gaps = 27/292 (9%)

Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324
           PS      +    L        +  S   +      S   ++ L + +     +      
Sbjct: 33  PSMGLKATAFMTSLRFNSTANTSNPSTAILPTDAASSSEISDKLVSFSDLADKVPVTSLH 92

Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQY 383
                +   I  G  +     +  L+   +   G      I + TV ++++ FPL  +  
Sbjct: 93  SDQLGYLKSIGMGQGWGPTAIIENLLEICHVYTGLPWWGTIAVVTVGIRVVLFPLYVRAS 152

Query: 384 VSTANMKNIQPKIDELREKFKQSP------PQVLQKAMIQLYKTHNINPLAGCWPILLQI 437
            +   M  ++P++D++ ++ K+           L +   +L K + I+ +A     ++Q+
Sbjct: 153 ANATKMSKVKPQLDQIMKEIKEDDSDSVQNKMKLLEKRKRLLKENGISTMAS-LAPIVQL 211

Query: 438 PV----FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           P     F A+ K+ +  +E        W ++L+A DP         +   +         
Sbjct: 212 PFAYGFFQALRKMANHPVEGFEDQGIWWFENLSAVDPYVGLQAIAAVAVIVVVR------ 265

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
              M                     I+  +P+  +    SF A +++Y++ +
Sbjct: 266 ---MGGET------GQHALAANMKKIMTIVPLASILITKSFSAAVVLYFAIN 308


>gi|240277666|gb|EER41174.1| mitochondrial Oxa1p [Ajellomyces capsulatus H143]
          Length = 499

 Score = 72.3 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 109/308 (35%), Gaps = 42/308 (13%)

Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325
                F+S             A    + +   P  S   +  L + A          +  
Sbjct: 71  PSSARFNSTATTPIPPSD-PAASVPVDSVLDAPISSGAQSIDLLSAADLANV--DISQIP 127

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI-MLTTVFVKLLFFPLAKKQYV 384
               +   +   + +  ++ +  ++  F+   G       + T VF+++L    A     
Sbjct: 128 EKLGYLKAVGLDYGWGPSRVIETILESFHIYGGLPWWGAAIGTAVFLRILVLKFAMDASD 187

Query: 385 STANMKNIQPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437
           ++A + +++     L+E+ ++          Q  Q+    + +THNI  L   +  L+Q+
Sbjct: 188 TSAKVASVKHLTQPLQEEVQRCYRENDTVGMQRAQQERKIINETHNIKLLKLAF-PLVQV 246

Query: 438 PVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           P+ F  ++V+     +      +  + W+ ++   DP                     I 
Sbjct: 247 PLSFGAFRVLRGMSALPVPGLDSESFLWLHNVTLHDPYF-------------------IL 287

Query: 494 PIIMSLSMFIQMKM---SPPPADKGQAM---ILNW-MPVVFVFALSSFPAGLIIYWSWSN 546
           PI   + M    K+   +    D    M   I+ + +PV+     S  P  L ++++ ++
Sbjct: 288 PIATGVVMHYTFKLGGETAGANDPTTMMAKPIMLYGLPVLSAICTSFLPGILQMFFATTS 347

Query: 547 VISIVQQA 554
           V++I Q  
Sbjct: 348 VLAIGQSY 355


>gi|327301651|ref|XP_003235518.1| hypothetical protein TERG_04572 [Trichophyton rubrum CBS 118892]
 gi|326462870|gb|EGD88323.1| hypothetical protein TERG_04572 [Trichophyton rubrum CBS 118892]
          Length = 484

 Score = 72.3 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 85/244 (34%), Gaps = 38/244 (15%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390
             +   + +  +  +  L+   +   G       + T V ++++ F         +  +K
Sbjct: 123 KELGLDYGWGPSSMVQFLLETLHITGGLPWWTATVATAVLIRVVLFNSIVSSAEVSTKLK 182

Query: 391 NIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            ++P+   +RE+      +         +  +  L + H I P       LLQIP+ F  
Sbjct: 183 ALKPRTTPIRERMMHCVRENDNVGALKAKNELALLNQEHGIKPWKAFL-PLLQIPLGFGC 241

Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           ++V+     +           W++++   DP                       PI    
Sbjct: 242 FRVLRGMSTLPVPGLDNESVLWLQNVTMPDPYF-------------------AIPIATGA 282

Query: 500 SMFIQMK------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            M++  +      +S     K   +++   P V  F ++ +P  L +Y+  +  +S+ Q 
Sbjct: 283 LMYVAFRRGGDTGLSNLMNSKLGKVVVYSFPFVTAFTMAFWPGILQLYFLTTGALSVCQT 342

Query: 554 AVIM 557
            ++ 
Sbjct: 343 YIMT 346


>gi|320168751|gb|EFW45650.1| hypothetical protein CAOG_03634 [Capsaspora owczarzaki ATCC 30864]
          Length = 535

 Score = 72.3 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 75/213 (35%), Gaps = 20/213 (9%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR--------EKFKQSPPQ 409
             + + + +  V  +L+  P+       TA M   +  + E R         K  Q    
Sbjct: 199 MPWWVTLAVGGVLSRLVLLPIVINSQRMTALMAQHKEALGEFRRRMDVARAAKAPQITIL 258

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMRHAPFWGWIKDL 465
            + +      K + I P      +L    VFF  ++ I       LE        W+  L
Sbjct: 259 AIYREQQDYQKLYGIKPGRTLLGVLAMALVFFGCWRSIYSLLTEPLESMVTGGPSWMPRL 318

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ--AMILNWM 523
              DPT+IF        Y+       ++  + S + ++    +P    +      ++ +M
Sbjct: 319 TMEDPTHIFPFVSAALVYISLKASATLF--VSSSTGWVYNLENPMAGQQVMFPKQMIRFM 376

Query: 524 ----PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
               P+V +      PAGL+ Y   + V  ++Q
Sbjct: 377 VNGLPLVALPFTLFMPAGLLFYLIPTQVYGLLQ 409


>gi|315653630|ref|ZP_07906550.1| membrane protein OxaA [Lactobacillus iners ATCC 55195]
 gi|315488992|gb|EFU78634.1| membrane protein OxaA [Lactobacillus iners ATCC 55195]
          Length = 319

 Score = 72.3 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            G + +I       +      V N        G AI++ T  ++L+  PL          
Sbjct: 35  VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94

Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
            +        Q  + +   K   +    L +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 95  QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S  +  A F G                   +    P  +   +  I+    
Sbjct: 155 IGIYQAVAYSKTLASASFMG-------------------ISLSKPSIVFAVVAAILY--- 192

Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             IQ  +S     + Q   +       P++ +     +   L +Y+    ++ ++QQ + 
Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +      +   +    +KN   +
Sbjct: 252 TFILM--PKVRADVDKELTKNPIKE 274


>gi|213400727|gb|ACJ47012.1| hypothetical protein [Wolbachia endosymbiont of Cordylochernes
           scorpioides]
          Length = 171

 Score = 72.3 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 63/164 (38%), Positives = 94/164 (57%), Gaps = 2/164 (1%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282
            D  L E  Y DI K  +     S  +W G +DKYW +  IP K    +   K+ + +  
Sbjct: 8   FDNKLEEWTYKDIAKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNDI 67

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
            ++QA F      ILPG S++  N+ FAGAK+   + HY+  L IP F+  +D+G  YFI
Sbjct: 68  DKFQADFVKPYKNILPGASVSNVNYFFAGAKKLNLLDHYKSALNIPLFDKAVDFGVLYFI 127

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            KP+F+L+ YF  ++ NFG+AI+L T+ +KLL  PL+ + Y+S 
Sbjct: 128 TKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYISI 171


>gi|240047829|ref|YP_002961217.1| putative inner membrane protein translocase component YidC
           [Mycoplasma conjunctivae HRC/581]
 gi|239985401|emb|CAT05414.1| Membrane protein oxaA [Mycoplasma conjunctivae]
          Length = 607

 Score = 72.3 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 74/561 (13%), Positives = 161/561 (28%), Gaps = 47/561 (8%)

Query: 37  RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96
           + +   +                 R      +  V   N  +       G    + +L+ 
Sbjct: 72  QNDKTVIPNYTIFKKDETNPNALVRTTTKGNNFLVSADNNKID------GQTILE-SLKK 124

Query: 97  YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKILTPTTP 155
              +  S S      S                  NN      S     +          P
Sbjct: 125 QSENNGSKSTYFGDFSSLIIFENEKGFEYLRGDKNNEFLFFTSADKQYIQKNNWTPIFIP 184

Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
                    +  F R      +   ++     N    +       ++    P        
Sbjct: 185 SPKFLVLIKDEKFVREGLF--YTQTELTSDNKNVLQVRNIDKFFYKLDNKLPPVYRPYST 242

Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275
                   + +K L   ++ D +  ++ N  E+   +      +         TS+ +  
Sbjct: 243 FARDVFQSIYNKILTLDQFKDGKLEALINKFEAVKGVDFDANDF------KTLTSYANTI 296

Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
           K L       +   + N  T    +        +        I  +     +  F  +  
Sbjct: 297 KQLLPTTNFTKFDIANNTYTYNLDEHAKPQTIAYQNKDASRPIVTWGDSWKLGPFYSIFV 356

Query: 336 WGWFYFIAKPM--FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +     I        L  +   +     +A+++ T  +  +F             ++  +
Sbjct: 357 YPLSKIILSISESQSLSQWNGWITVLAIVAVVVLTKTLSFIFRFKTIFGQSKQLELQAKK 416

Query: 394 PKIDELREKFKQSP--PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
            KID   E ++++    Q  ++ + +LYK +N +P A    +L+  P+F A+++V+    
Sbjct: 417 AKIDAKYEAYQKNKVMQQRQRQEIAELYKKNNFSPFAPFSQVLVTTPIFIAVWRVLQGIP 476

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM----KM 507
            ++    +    +L+A   T+   LF     YLP         I++ ++  +Q      +
Sbjct: 477 SLK--VTFFLGLELSA---TSYQQLFAGQWIYLPIL-------ILVVVTQALQQLVPKWL 524

Query: 508 SPPPAD-----------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +    +           K Q      + +VF+F    F A L IYW    +  + Q   I
Sbjct: 525 NKKKTNRIINASESEAMKKQLKTQRIITIVFIFFGVVFQASLQIYWIIGGIWEVAQSLGI 584

Query: 557 MKMHGAEIGLIDRLRSTFSKN 577
             +  ++            K 
Sbjct: 585 FYLQKSKFYRDKMQPFLRKKK 605


>gi|225557121|gb|EEH05408.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 499

 Score = 72.3 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 95/242 (39%), Gaps = 39/242 (16%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI-MLTTVFVKLLFFPLAKKQYVSTANMK 390
             +   + +  ++ +  ++  F+   G       + T VF+++L    A     ++A + 
Sbjct: 134 KAVGLDYGWGPSRVIETILESFHIYGGLPWWGAAIGTAVFLRVLVLKFAMDASDTSAKVA 193

Query: 391 NIQPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
           +++     L+E+ ++          Q  Q+    + +THNI  L   +  L+Q+P+ F  
Sbjct: 194 SVKHLTQPLQEEVQRCYRENDTVGMQRAQQERKIINETHNIKLLKLAF-PLVQVPLSFGA 252

Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           ++V+     +      +  + W+ ++   DP                     I PI   +
Sbjct: 253 FRVLRGMSALPVPGLDSESFLWLHNVTLHDPYF-------------------ILPIATGI 293

Query: 500 SMFIQMKM---SPPPADKGQAM---ILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            M    K+   +    D    M   I+ + +PV+     S  P  L ++++ ++V++I Q
Sbjct: 294 VMHYTFKLGGETAGANDPTTMMAKPIMLYGLPVLSAICTSFLPGILQMFFATTSVLAIGQ 353

Query: 553 QA 554
             
Sbjct: 354 SY 355


>gi|213965316|ref|ZP_03393512.1| putative inner membrane protein translocase component YidC
           [Corynebacterium amycolatum SK46]
 gi|213951932|gb|EEB63318.1| putative inner membrane protein translocase component YidC
           [Corynebacterium amycolatum SK46]
          Length = 452

 Score = 71.9 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 99/283 (34%), Gaps = 41/283 (14%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            E  +    F   A  + +   +      ++ +++ L    V+     LA +Q++S    
Sbjct: 4   LEPFVWLVSFVLKAWHLLLASVFHLPSSLSWTLSLFLLVFTVRGALAFLAFQQFISARKT 63

Query: 390 KNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
            N++P++  L+E++++    + PQ    A  ++ K   I       P+ +QIPV   + +
Sbjct: 64  ANLRPQLFMLKERYRRSIEPNSPQYANFASKEMRKAEGIKTSVMLAPLFVQIPVIMGLVR 123

Query: 446 VISISLEMRHAP-----------------FWGWIKDLAAADPTNI------FTLFGILPF 482
           ++   L     P                  +     L    P  +        +FG    
Sbjct: 124 MLRHMLRASEGPGLPASHNVGFISKDEISDFLSATFLGQPLPAYLRMDPEQLQIFGGNHD 183

Query: 483 YLPGFMHVGIWP--IIMSLSMFIQMKMSPPPADKGQA------MILNWM----PVVFVF- 529
            L  F  +GI    I    ++ I  +      D   +        +  M    P++ +F 
Sbjct: 184 SLLTFCIIGIVAAAIFTGFNLVISYRRLQRTLDYSNSVSVFLSKFMRVMLIYAPLMILFA 243

Query: 530 -ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571
                 P  LI+YW  +N  ++ Q  ++ +       L D  R
Sbjct: 244 GFFGPTPVALIVYWVTNNFWTLTQNIILTRYVEKTYPLTDDFR 286


>gi|330685212|gb|EGG96875.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus
           epidermidis VCU121]
          Length = 270

 Score = 71.9 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 32/237 (13%)

Query: 338 WFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----I 392
           ++    +PM  L+  F      N+G+AI+   + V+ +  P    Q  +   M+     +
Sbjct: 30  FYNTFVQPMDRLLHLFGRLFNYNYGLAIIAIVLIVRFILLPFMLIQVKNMHIMREKTKVV 89

Query: 393 QPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYK 445
           QP+ID++REK K++  Q       + +++ YK + INP     GC+P+++QIP+   +Y 
Sbjct: 90  QPQIDKIREKIKEADSQEERNAANQLLMKKYKQYGINPFKNIIGCFPVIIQIPILMGLYM 149

Query: 446 VI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
            +    S  +   P + W  +L              +   L   +   I P++ S+    
Sbjct: 150 SLKYPSSDGITKYPHFLWF-NLTEP----------NIMMTLIAALMYLIQPLVNSIHY-- 196

Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
                P    K   +++   P+   +A     + L +YWS S    I+Q     + +
Sbjct: 197 -----PKNERKTYYVMMILSPIFITYASLHSASALGLYWSLSAAFLIIQMHFAHRHY 248


>gi|213400709|gb|ACJ47003.1| hypothetical protein [Wolbachia endosymbiont of Nasonia
           longicornis]
          Length = 171

 Score = 71.9 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 2/164 (1%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282
            D  L E  Y DI K  +     S  +W G +DKYW +  IP K    +   K+ + +  
Sbjct: 8   FDNKLEEWTYKDISKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNT 67

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
            ++Q  F     +ILPG S++  N+ FAGAK+   +  Y+  L IP F+  +D+G  YFI
Sbjct: 68  DKFQVDFVKPYKSILPGASVSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFI 127

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            KP+F+L+ YF  ++ NFG+AI+L T+ +KLL   L  + Y+S 
Sbjct: 128 TKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLSLFNRSYISM 171


>gi|156847305|ref|XP_001646537.1| hypothetical protein Kpol_1055p34 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117215|gb|EDO18679.1| hypothetical protein Kpol_1055p34 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 391

 Score = 71.9 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 91/307 (29%), Gaps = 35/307 (11%)

Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326
               F S     S   A  + +        +   +   +  +            Y   + 
Sbjct: 38  NGIRFKSTTSPSSGVDAANEIQTQLPSFDEIASNAGAISEQVSQAVNMTSDQIGYMNSIG 97

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVS 385
           +           + +    +   + Y +   G      I   T+ V+L  FPL  K   +
Sbjct: 98  L--------AQSWTWPPDLIQHFLEYIHVYTGLPWWGTICAATLLVRLAMFPLYVKSSDT 149

Query: 386 TANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLA---GCWPILLQIP 438
            A    I+P++D + +    +      Q +     +L   + I           + + + 
Sbjct: 150 IARNSRIKPELDIVTKDLMSAGTLLESQTIALKRKKLLADNGIQTRWLAAPMLQLPVALG 209

Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII-- 496
            F  I  + +  ++        W  DL  ADP                F+  G+      
Sbjct: 210 FFSGIRAMANYPVDGFTTQGLSWFTDLTQADPY-----------LGLQFITAGVLMTFTR 258

Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +      Q                  +P++ + A  +  AG+++Y++ +   S++Q  ++
Sbjct: 259 LGGETGAQQF------SPAMKKFFTILPLISIPATMNLSAGVVLYFAVNGTFSVMQTVLL 312

Query: 557 MKMHGAE 563
                 +
Sbjct: 313 RNKTVRK 319


>gi|309356301|emb|CAP37412.2| hypothetical protein CBG_20396 [Caenorhabditis briggsae AF16]
          Length = 301

 Score = 71.9 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 79/240 (32%), Gaps = 38/240 (15%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANM 389
                 G     +      +   +  +       I+ TT+ ++ L   +        A  
Sbjct: 11  WRSSGSGRGGIPSSYFRWALESMHMHLDIPWWLTIVATTITLRALLIGVPVMSQKLVAKQ 70

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMI-------QLYKTHNINPLAGCWPILLQIPVF-- 440
              + +++E R++  ++  +  Q              ++ +I        +     VF  
Sbjct: 71  SMYRKEMNEFRDRIDEARKENNQLLQQQILLEQRDFLRSKDIRLGRQFMVMAANGAVFAT 130

Query: 441 --FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
             FAI K+++++          W  DL A DP                       P I +
Sbjct: 131 QFFAIKKMVAVNYPGLSEGGALWFTDLTATDPYY-------------------ALPFISA 171

Query: 499 LSMFIQMKM------SPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIV 551
            +M +  K+      +           +++ +PVV     S F  GL +YW+ SN +S++
Sbjct: 172 ATMALVTKVGIEMGTTADQMPPVMRAFMSYGLPVVIFGVSSQFATGLCVYWTASNAVSLI 231


>gi|302551683|ref|ZP_07304025.1| membrane protein [Streptomyces viridochromogenes DSM 40736]
 gi|302469301|gb|EFL32394.1| membrane protein [Streptomyces viridochromogenes DSM 40736]
          Length = 250

 Score = 71.9 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 16/210 (7%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L T  V+LL  PL++           +QPKI ELR+K  ++P + LQ+A+++L+    
Sbjct: 42  IVLFTALVRLLVHPLSRAAARGQKARTALQPKIAELRKKHGKNPEK-LQRAVLELHAEEK 100

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           ++PLAGC P LLQ+P FF +Y + S              + LAA             PF 
Sbjct: 101 VSPLAGCLPGLLQVPAFFLLYHLFSSDTIGGETNELLGHQLLAAPLGGRWADALQAGPFG 160

Query: 484 LPGFMHVGIWPIIMSLSM--FIQMKMSPPPADKGQ-----AM-----ILNWMPVVFVFAL 531
             G ++ G++ ++  +++  +   K         Q      M     +   MP +  F L
Sbjct: 161 GAGLVYAGLFVVVACVAVFSYRLSKRMMAANPAVQVSGGEQMPGVGAVTKVMPFMSFFTL 220

Query: 532 SS---FPAGLIIYWSWSNVISIVQQAVIMK 558
            +    P    +Y   S   S+V++A + +
Sbjct: 221 ITVAVVPLAAALYVVTSTTWSVVERAALYR 250


>gi|152967884|ref|YP_001363668.1| hypothetical protein Krad_3941 [Kineococcus radiotolerans SRS30216]
 gi|151362401|gb|ABS05404.1| 60 kDa inner membrane insertion protein [Kineococcus radiotolerans
           SRS30216]
          Length = 233

 Score = 71.9 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 90/230 (39%), Gaps = 33/230 (14%)

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           +  ++ + +++   + +A++   V  + L  PL   Q  +      ++P++  ++++++ 
Sbjct: 20  VAQVLVHLHDVGAPWPLAVLGLVVLARTLLLPLFVAQQRAVLRAAALRPRVLAVQDRYRG 79

Query: 406 SP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--------SISLEM 453
                  + LQ+ +  L++   +NPL GC P LLQ PVF A+   +          S  +
Sbjct: 80  RTDPASRRALQQEVAALHRQAGVNPLGGCLPGLLQAPVFLALTLTLQSGDTLTAFGSATL 139

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
             AP  G +    A  P  +     +    L       +  +    S        P P  
Sbjct: 140 AGAPLSGVLTH--APGPATLLVGILL----LLLTAATQVVTVRAGTSGV------PAPTA 187

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ----AVIMKM 559
               +         V     FP G+++YW+ S V S  QQ     V+++ 
Sbjct: 188 LLVVLPALV-----VVPAVHFPIGVLLYWAASGVWSAGQQLVARWVVLRR 232


>gi|83319450|ref|YP_424810.1| putative inner membrane protein translocase component YidC
           [Mycoplasma capricolum subsp. capricolum ATCC 27343]
 gi|1176889|sp|P43042|OXAA_MYCCT RecName: Full=Membrane protein oxaA
 gi|416240|dbj|BAA03620.1| orf R3 [Mycoplasma capricolum subsp. capricolum ATCC 27343]
 gi|83283336|gb|ABC01268.1| membrane protein oxaA [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 388

 Score = 71.9 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 90/222 (40%), Gaps = 16/222 (7%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-- 413
              +   AI LTT+ +K +      K  ++   M++IQ K+ +++ K+K       ++  
Sbjct: 152 YGISSIFAIFLTTLLIKGITLSFGWKSQINQEKMQDIQLKVADIQAKYKDKKDMQSKQKQ 211

Query: 414 --AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
              +  LYK  N++  +        +P  FAIY ++  +  ++ A        +A  +  
Sbjct: 212 QLEIQALYKKENMSQFSALAGSFAPLPFLFAIYAIVRSTRALKIASVG----PIALIEGP 267

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAM------ILNW-M 523
                 G   + +   +++ +  + M L   +QMK        + Q        I+   M
Sbjct: 268 WQQITAGNYIYIIILAIYLPLQAVSMLLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVM 327

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             VF+  + S   G+ IYW +S+++ I+Q       +  +  
Sbjct: 328 MFVFIIIIVSVATGVCIYWIFSSILQIIQTYAFYLYNEKKRK 369


>gi|317057908|ref|YP_004106375.1| membrane protein insertase, YidC/Oxa1 family [Ruminococcus albus 7]
 gi|315450177|gb|ADU23741.1| membrane protein insertase, YidC/Oxa1 family [Ruminococcus albus 7]
          Length = 465

 Score = 71.9 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%)

Query: 499 LSMFIQMKMSPPPADKG--QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +S +   K +P  A        ++  MP+  ++    +P GL IYW +S++ SI+Q  +I
Sbjct: 292 ISQYYTKKNNPSAAKMTGSNNAVMYIMPLFSLWITFKYPIGLGIYWCFSSLFSIIQ-MII 350

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580
           +K       + + +    +K   S
Sbjct: 351 LKKIYTPEHVAELVEKDMAKKKTS 374



 Score = 59.2 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/114 (37%), Positives = 70/114 (61%), Gaps = 1/114 (0%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            F  IA P+  +M   Y +  N+GIA+++ T+  KL+ FPL+ KQ  S A++  ++PK+D
Sbjct: 1   MFDLIAIPLGWIMKGCYYVFKNYGIALLVFTLITKLIVFPLSVKQEKSMASIAMLKPKLD 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           EL +K+ ++  Q LQ+  + LY    +NP+A C PIL+ + + FA+  VI   L
Sbjct: 61  ELEKKYGKNK-QKLQEEQMALYSETGVNPMASCLPILVMMLILFAMIPVIYGPL 113


>gi|38372430|sp|O13375|OXA1_SACSE RecName: Full=Mitochondrial inner membrane protein OXA1; AltName:
           Full=Cytochrome oxidase biogenesis protein OXA1;
           AltName: Full=Oxidase assembly protein 1; Flags:
           Precursor
 gi|2583063|gb|AAB82601.1| Oxa1p [Saccharomyces servazzii]
          Length = 371

 Score = 71.9 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 89/260 (34%), Gaps = 36/260 (13%)

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQ 382
              I     +     +++ A  +   + Y +   G      I   T+ V+LL FP+  K 
Sbjct: 67  STHIGYLNSIGLAQTWHWPADIIQHALEYVHVYTGLPWWGTICTVTILVRLLMFPIYVKS 126

Query: 383 YVSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438
             + A    I+P++D++ ++   +      Q +     +L   + I         +LQ+P
Sbjct: 127 SDTIAKNSRIKPQMDKVTKELMATTDLAEGQKIAVRRRKLLSENGIKNRW-LAAPMLQLP 185

Query: 439 VFFAIYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           +    +  +       ++        W  DL  +DP                        
Sbjct: 186 IAIGFFNALRSMANFPVDGFANQGILWFHDLTLSDPYLGLQFITA--------------A 231

Query: 495 IIMSLS-----MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
           ++MS S        Q    P             +P+V + A  +    +++Y++ +   S
Sbjct: 232 VLMSFSRLGGETGAQQFSGP------MKRFFIILPLVSIPATMNLSTSVVLYFAINGTFS 285

Query: 550 IVQQAVI-MKMHGAEIGLID 568
           ++Q  V+  K    ++ + +
Sbjct: 286 VLQTLVLRNKWFRKKLNIAE 305


>gi|295398616|ref|ZP_06808646.1| membrane protein [Aerococcus viridans ATCC 11563]
 gi|294973139|gb|EFG48936.1| membrane protein [Aerococcus viridans ATCC 11563]
          Length = 308

 Score = 71.6 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 86/246 (34%), Gaps = 29/246 (11%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
                 +++   +  N      I  +   + +  L     K        M   QP + E+
Sbjct: 43  PIGQLIVWIADQFAGNYGIAIIIITIAIRIILLPLTLNQLKGSTRQQIKMAAFQPYLKEI 102

Query: 400 REKFKQSPPQVLQK----AMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453
           +E+ K +  Q  +        +  + +N++     GC P+LLQ+P+   +Y  I +S   
Sbjct: 103 QERQKNATTQEEKMALATEQQEFMRENNVSMFGGMGCLPLLLQLPIISGLYTAIRVS--- 159

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
                          +P      FGI        M + I  I+M L          P   
Sbjct: 160 ---------------EPIANSEFFGIS--LGESHMVLAIITIVMYLIQSFITLQGVPEEQ 202

Query: 514 KGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572
           K Q     +M P++  F + + PAGL +Y+    + SI+Q          +  +   +  
Sbjct: 203 KAQMRSTLFMTPIMMGFIVFTTPAGLTLYFLAGAIWSILQSLFTTFYF--KPRIQAEVDK 260

Query: 573 TFSKNY 578
             ++N 
Sbjct: 261 EMAENP 266


>gi|15828623|ref|NP_325983.1| putative inner membrane protein translocase component YidC
           [Mycoplasma pulmonis UAB CTIP]
 gi|14089565|emb|CAC13325.1| conserved hypothetical protein [Mycoplasma pulmonis]
          Length = 608

 Score = 71.6 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 71/485 (14%), Positives = 145/485 (29%), Gaps = 41/485 (8%)

Query: 97  YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156
           Y    SSNS +  L       N Y       + +   +  +   ++   +     P    
Sbjct: 120 YGKTKSSNSALAILED-----NTYIDSDGQENKSIIYKDNSGKYLFFNDTLTTYDPINKF 174

Query: 157 KLVFKNANNILFERT-ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215
             ++        +   I   E+    I         +          ++         + 
Sbjct: 175 TDIYAIGRLTERDSDAIKFRENNPKIIEHLKLFKVSEVPISREYQPNIKFARDFLQALYD 234

Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275
                            KY+   +   S    +         +  +     + +      
Sbjct: 235 KTLKLPVYQNILRADGSKYASFNEFLTSLEKRTT-------NHLKTQLNKQELSEEDLNS 287

Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
             LSD  +     +      ++     T        A +F  ++   + +A   +  +  
Sbjct: 288 ITLSDSESAALNAYLTRVNPLISENGFTGLKKSLNNADDFELVYSQGEKIAQSDYGQIPV 347

Query: 336 WGWF-YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF-----------VKLLFFPLAKKQY 383
             W  Y+   P + L+        N+  +   +               +L  F L  K  
Sbjct: 348 VTWGEYWNYGPFYALLVAPIASFTNWVASAFESGFGIVFAIIVVVVVTRLFIFGLTFKVT 407

Query: 384 VSTANMKNIQPKIDELREKFKQSPP-----QVLQKAMIQLYKTHNINPLAGCWPILLQIP 438
            S    + +Q K  ++  K+          Q  QK +  LYK HNI+P+     I    P
Sbjct: 408 FSQYKQQELQGKKAKIDAKYAAYENNKMMKQRKQKEIQDLYKKHNISPIDFVASIAWSSP 467

Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           +F A+++VI     ++    +    + + A    I     +  + +   + V I   I  
Sbjct: 468 LFIAVWRVIQSVPVIK--SNFFLGVNFSTASYQEILAKNWVYLWVVSLALIVQIISQI-- 523

Query: 499 LSMFIQMKMSPPPAD--KGQA-----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           L  ++  K     A+  + Q+        N M +VF+    +  AG+ IYW    + +I 
Sbjct: 524 LPRWLAKKKIKERANVYEMQSYKKNNKTQNIMLIVFMVFTITLQAGVQIYWIIGGLWTIG 583

Query: 552 QQAVI 556
           Q   +
Sbjct: 584 QTLFV 588


>gi|172039795|ref|YP_001799508.1| putative preprotein translocase subunit [Corynebacterium
           urealyticum DSM 7109]
 gi|171851099|emb|CAQ04075.1| putative preprotein translocase subunit [Corynebacterium
           urealyticum DSM 7109]
          Length = 315

 Score = 71.6 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 87/237 (36%), Gaps = 45/237 (18%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAM 415
           + +A++   + V+ L  PL  +Q  S+ N+ N++P++ +L +++         + L +  
Sbjct: 31  WIVAVIFLVLTVRSLLAPLTLRQIRSSRNLSNLRPQLYQLSQEYVGRTDAESRKELNQRR 90

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA---PFWGWIKDLAAADPTN 472
            Q+          GC P L+QIPVF  +Y+++                    L+  D   
Sbjct: 91  KQMQLEGGYRMRDGCLPALIQIPVFVGLYRMLLRVARPNGVVDPDNLQGFGPLSDQDVYT 150

Query: 473 IFT--LFGILPFYLPGF--------------MHVGIWPIIMSLSM------FIQMKMSPP 510
                +FG+                      +     P+++  S       F  ++ +  
Sbjct: 151 FMHARIFGVPLITYVQMPAQSLANLGTDQASVFRVALPMVLLASTFTATNLFFSIRRTKA 210

Query: 511 PADKGQA---------MILN----WMPVVFVFALSSFPAGLIIYWSWSNV--ISIVQ 552
             D  Q           ++     +MP++F       P  + +YW  +N+  ++I Q
Sbjct: 211 TMDPDQGFSYFALGLLKVMLPIVFFMPILFGLLG-PLPVMVFVYWLTNNLCTLTITQ 266


>gi|255324011|ref|ZP_05365136.1| preprotein translocase YidC subunit [Corynebacterium
           tuberculostearicum SK141]
 gi|255298868|gb|EET78160.1| preprotein translocase YidC subunit [Corynebacterium
           tuberculostearicum SK141]
          Length = 325

 Score = 71.6 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 61/289 (21%), Positives = 109/289 (37%), Gaps = 66/289 (22%)

Query: 338 WFYFIAKPMFMLMSYFYN---------LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++ +++              + +AI+L T  +K L       Q  S+  
Sbjct: 1   MLNFIYWPISAVLWFWHWLLSLVMDPAWGITWILAIVLLTWTLKALMVKPTISQIRSSRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ IQPK+ E+R K+     +   + M ++YK   + P+AGC P+ +QIP+F  ++ V+ 
Sbjct: 61  MQEIQPKVQEIRAKYGNDQTKA-AQEMQKVYKESGVRPMAGCLPVFVQIPMFVGLFHVLR 119

Query: 449 I-------------------SLE-MRHAPFWGWIKDLAAA-------DPTNIFTLFGILP 481
                               S+E   +   + +  DL          D   +  L    P
Sbjct: 120 SFDRTVAVAGGIGHPSGDPMSIEDNANTANYIFKPDLVQQFLDAKIFDVPLVTNLRLNSP 179

Query: 482 ------FYLPGFMHVGIWPIIMSLSMF-IQMKMSPP----PADKGQA------------- 517
                       + V +  II  ++ F  +M ++       A K QA             
Sbjct: 180 IVEGVTTSQAAVIIVPMIAIIAVMTHFNARMSLNRQEKRRAAGKTQAPQGQNAEMMQQQM 239

Query: 518 -----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
                M+L  MP + VF+ S +P GL+ Y   + V +  Q  ++     
Sbjct: 240 AMMSKMMLWVMPAMLVFSGSIWPIGLLFYMMANTVWTFFQTRIVYAKMD 288


>gi|213400711|gb|ACJ47004.1| hypothetical protein [Wolbachia endosymbiont of Nasonia
           vitripennis]
          Length = 171

 Score = 71.2 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 62/164 (37%), Positives = 93/164 (56%), Gaps = 2/164 (1%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282
            D  L E  Y DI K  +     S  +W G +DKYW +  IP K    +   K+ + +  
Sbjct: 8   FDNKLEEWTYKDISKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHTNANDI 67

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
            ++Q  F  +  +ILPG S +  N+ FAGAK+   +  Y+  L IP F+  +D+G  YFI
Sbjct: 68  DKFQVDFVKSYKSILPGASTSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFI 127

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            KP+F+L+ YF  ++ NFG+AI+L T+ +KLL  PL+ + YVS 
Sbjct: 128 TKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVSM 171


>gi|262183267|ref|ZP_06042688.1| putative preprotein translocase subunit [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 328

 Score = 71.2 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 100/273 (36%), Gaps = 37/273 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
                  P+  +M  ++ L  +       + + I+   + V+ +  PL            
Sbjct: 1   MISIFMYPVSGIMKLWHLLFSSFLDGSMAWILTIVFLVLTVRGIIAPLNWLSVKQGRIGA 60

Query: 391 NIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            I+P++ +L E+  Q+              +L K    NP  GC+PI L  P F  +Y+V
Sbjct: 61  LIRPEMTKLEEQLNQADSVEEAVTILTQQRELNKRFQHNPAVGCFPIFLITPAFIGLYQV 120

Query: 447 ISISLEMRHAPF-WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ- 504
           +       + P     + D+++       T+FG+         H  I P++++  +F   
Sbjct: 121 VLRVSGSTNEPVGMLTLDDVSS---FRNSTVFGVPLTDFAREHHDLILPMLLAALVFTSL 177

Query: 505 --------MKMSPPPADKGQAMILNWMPVV---FVFALSSF------PAGLIIYWSWSNV 547
                     ++     K    +L +M ++     + L S       P  +I YW  + +
Sbjct: 178 NTLITLYRSYLTTRFDQKIPRRLLWFMALMVILIPWMLWSVAWNGPIPVTIIFYWGCTYL 237

Query: 548 ISIVQQ----AVIMKMHGAEIGLIDRLRSTFSK 576
            +++Q      ++ + +     + +  R +  +
Sbjct: 238 FTLLQTLVYEFILRRRYPLPEAVHELRRESIRR 270


>gi|256384304|gb|ACU78874.1| membrane protein OxaA [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385137|gb|ACU79706.1| membrane protein OxaA [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455637|gb|ADH21872.1| membrane protein OxaA [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 396

 Score = 71.2 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 90/222 (40%), Gaps = 16/222 (7%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-- 413
              +   AI LTT+ +K +      K  ++   M++IQ KI +++ K+K       ++  
Sbjct: 160 YGISAIFAIFLTTLLIKGITLSFGWKSQINQEKMQDIQLKIADIQAKYKDKKDMQSKQKQ 219

Query: 414 --AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
              +  LYK  N++  +        +P  FAIY ++  +  ++ A        +A  +  
Sbjct: 220 QLEIQALYKKENMSQFSALAGSFAPLPFLFAIYAIVRSTRALKIAAVG----PIALIEGP 275

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAM------ILNW-M 523
                 G   + +   +++ +  + M L   +QMK        + Q        I+   M
Sbjct: 276 WQQITSGNYIYIIILAIYLPLQAVSMLLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVM 335

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             VF+  + S   G+ IYW +S+V+ I+Q       +  +  
Sbjct: 336 MFVFIIIIVSVATGVCIYWIFSSVLQIIQTYAFYLYNEKKRK 377


>gi|42561574|ref|NP_976025.1| putative inner membrane protein translocase component YidC
           [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|42493073|emb|CAE77667.1| Conserved hypothetical transmembrane protein [Mycoplasma mycoides
           subsp. mycoides SC str. PG1]
 gi|301320601|gb|ADK69244.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma mycoides
           subsp. mycoides SC str. Gladysdale]
          Length = 396

 Score = 71.2 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 90/222 (40%), Gaps = 16/222 (7%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-- 413
              +   AI LTT+ +K +      K  ++   M++IQ KI +++ K+K       ++  
Sbjct: 160 YGISAIFAIFLTTLLIKGITLSFGWKSQINQEKMQDIQLKIADIQAKYKDKKDMQSKQKQ 219

Query: 414 --AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
              +  LYK  N++  +        +P  FAIY ++  +  ++ A        +A  +  
Sbjct: 220 QLEIQALYKKENMSQFSALAGSFAPLPFLFAIYAIVRSTRALKIAAVG----PIALIEGP 275

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAM------ILNW-M 523
                 G   + +   +++ +  + M L   +QMK        + Q        I+   M
Sbjct: 276 WQQITSGNYIYIIILAIYLPLQAVSMLLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVM 335

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             VF+  + S   G+ IYW +S+V+ I+Q       +  +  
Sbjct: 336 MFVFIIIIVSVATGVCIYWIFSSVLQIIQTYAFYLYNEKKRK 377


>gi|325678529|ref|ZP_08158140.1| putative stage III sporulation protein J [Ruminococcus albus 8]
 gi|324109748|gb|EGC03953.1| putative stage III sporulation protein J [Ruminococcus albus 8]
          Length = 466

 Score = 71.2 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 56/134 (41%), Gaps = 4/134 (2%)

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
           +S E++          L     T        +   +P    +    ++  +S   Q K +
Sbjct: 244 VSGELKEFSEDFHYDFLGIYLGTTPSWKENKVSCLVPVLSFLLQL-LVTVVSQHFQKKNN 302

Query: 509 PPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           P  A        IL +MP+  ++    +P GL IYW +S++ S++Q  ++ K++  E  +
Sbjct: 303 PDMAKMTGQNAFILYFMPLFSLWLTFKYPIGLGIYWCFSSLFSLIQTVILNKVYTPEY-V 361

Query: 567 IDRLRSTFSKNYNS 580
            + ++   +K   S
Sbjct: 362 AELVQKDLAKQKAS 375



 Score = 61.2 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 1/114 (0%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            F  IA P+  +M   Y +  N+GIA+++ T   +L+ FPL   Q  S A    ++PK+D
Sbjct: 1   MFDLIAIPLGWIMKGCYYVFKNYGIALLVFTFLTRLIMFPLNVNQQKSMAKNTMLKPKLD 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           EL  K+ ++  Q LQ+  + LY    +NP+A C P+++ + + FA+  VI   L
Sbjct: 61  ELERKYGKNK-QKLQEEQMALYNETGVNPMASCLPMIVMMLILFAMIPVIYGPL 113


>gi|312875598|ref|ZP_07735599.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LEAF 2053A-b]
 gi|311088852|gb|EFQ47295.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LEAF 2053A-b]
          Length = 319

 Score = 70.8 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            G + +I       +      V N        G AI++ T  ++L+  PL          
Sbjct: 35  VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94

Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
            +        Q  + +   K   +    L +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 95  QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S  +  + F G                   +    P  +   +  I+    
Sbjct: 155 IGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192

Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             IQ  +S     + Q   +       P++ +     +   L +Y+    ++ ++QQ + 
Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +      +   +    +KN   +
Sbjct: 252 TFILM--PKVRADVDKELTKNPIKE 274


>gi|213400717|gb|ACJ47007.1| hypothetical protein [Wolbachia endosymbiont of Tribolium confusum]
          Length = 171

 Score = 70.8 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 62/164 (37%), Positives = 93/164 (56%), Gaps = 2/164 (1%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282
            +  L E  Y DI K  +     S  +W G +DKYW +  IP K    +   K+ + +  
Sbjct: 8   FNNKLEEWTYKDISKKRLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNI 67

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
            ++QA F      ILPG S +T N+ FAGAK+   +  Y+  L IP F+  +D+G  YFI
Sbjct: 68  DKFQADFVRPYTHILPGTSASTLNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFI 127

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            KP+F+L+ YF  ++ NFG+AI+L T+ +KLL  PL+ + Y+S 
Sbjct: 128 TKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYISM 171


>gi|329920138|ref|ZP_08276969.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           SPIN 1401G]
 gi|328936592|gb|EGG33036.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           SPIN 1401G]
          Length = 319

 Score = 70.8 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            G + +I       +      V N        G AI++ T  ++L+  PL          
Sbjct: 35  VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94

Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
            +        Q  + +   K   +    L +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 95  QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S  +  + F G                   +    P  +   +  I+    
Sbjct: 155 IGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192

Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             IQ  +S     + Q   +       P++ +     +   L +Y+    ++ ++QQ + 
Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +      +   +    +KN   +
Sbjct: 252 TFILM--PKVRADVDKELTKNPIKE 274


>gi|320527122|ref|ZP_08028309.1| membrane protein insertase, YidC/Oxa1 family [Solobacterium moorei
           F0204]
 gi|320132450|gb|EFW24993.1| membrane protein insertase, YidC/Oxa1 family [Solobacterium moorei
           F0204]
          Length = 302

 Score = 70.8 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 88/277 (31%), Gaps = 27/277 (9%)

Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371
           A     +                    F +    +   ++    + G   I  ++    +
Sbjct: 32  ANGHIILISESTTFGEIFQTENWFSALFVWPLSWVLNKLAPVITVGGAIAIVTVVVNGLL 91

Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431
            +                  +     +   +  Q+    + +   QL + +N+NP +   
Sbjct: 92  AVFTLKSQMGMQRMQMLQPELNKIQRKYEGRDDQASKMRMAQEQQQLMRKYNVNPGSMML 151

Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491
              +Q+P+  A++  I        A        L           FG+L       +   
Sbjct: 152 VQFVQLPIIMAMFMAIQR------AEAVVNGTFLGMNLQVKPSEAFGLLFKGDLSGLPYI 205

Query: 492 IWPIIMSLSM--------FIQMKMS----------PPPADKGQAMILNWMPVVFVFALSS 533
           I  ++M+++         + Q K +          P P +    M+  +M V+ +     
Sbjct: 206 ILFLLMAVTQVVLVLLPIYFQKKKAAAEAAKHHRKPEPTNNQNIMMQMYMIVMVLAFGLM 265

Query: 534 FPAGLIIYWSWSNVISIVQQAV---IMKMHGAEIGLI 567
           + +G+ ++W   N++ I++  +   IM+ +  + GL 
Sbjct: 266 WQSGMSLFWFIRNIVDIIKTIIVQNIMEKNSQKEGLR 302


>gi|297199948|ref|ZP_06917345.1| membrane protein [Streptomyces sviceus ATCC 29083]
 gi|297147539|gb|EDY54451.2| membrane protein [Streptomyces sviceus ATCC 29083]
          Length = 237

 Score = 70.8 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 17/211 (8%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L T FV+LL  PL++           +QPKI ELR++ K  P + LQKA++ L+    
Sbjct: 28  IVLFTAFVRLLVHPLSRAAARGQKARTKLQPKIAELRKQHKDQPDK-LQKAVLALHAEEK 86

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG-ILPF 482
           ++PL+GC P L Q+P FF +Y + S +     A      +  AA          G    F
Sbjct: 87  VSPLSGCLPGLFQLPAFFLLYHLFSNTTIGGKANELLSHQLFAAPLGGRWADALGDGGMF 146

Query: 483 YLPGFMHVGIWPIIMSLSMF---IQMKMS-----PPPAD----KGQAMILNWMPVVFVFA 530
              G ++V ++  ++ ++ F      +M       P  D     G   +   MP +  F 
Sbjct: 147 KGAGLVYVCLFAFVVVVATFNYRRTKRMMATNPVMPVTDGQPVPGAGAMTKLMPFMSFFT 206

Query: 531 LSS---FPAGLIIYWSWSNVISIVQQAVIMK 558
           L +    P    +Y   S+  + V++A + +
Sbjct: 207 LFTVAVVPLAAALYVVTSSTWAAVERAALYR 237


>gi|318040384|ref|ZP_07972340.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. CB0101]
          Length = 378

 Score = 70.8 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKGQA 517
           I  LAA          G + FY  G ++  + I       S+F+   +S    PA+  QA
Sbjct: 236 IPGLAARSGFLFIKALGQVGFYTDGAINWDIAILVAAFGASLFVSQILSGMGMPANPQQA 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 PV+       FP  AG+++Y   +N+    Q  ++ +
Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVVANIFQAAQTFLLTR 338



 Score = 55.8 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 5/159 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  TV ++L  FPL+     S   M+  QP + + + + 
Sbjct: 8   NLLLPILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67

Query: 404 ---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
                + PQ  Q+ +  L K    +PL+GC P+L+Q+P+ FA++  +  S      P+  
Sbjct: 68  KAKYANNPQKQQEELGSLMKEFG-SPLSGCLPLLVQMPILFALFATLRGSP-FADVPYTL 125

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
            +K L A     +       P +          P+I SL
Sbjct: 126 NLKVLPADQIAAVEPKPFNSPSHSIFVTATNHVPVIASL 164


>gi|50307981|ref|XP_453990.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643125|emb|CAG99077.1| KLLA0E00925p [Kluyveromyces lactis]
          Length = 387

 Score = 70.8 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 84/251 (33%), Gaps = 26/251 (10%)

Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAK 380
           +    I     +     + +    +  +M   +   G      I +TTV  ++L FPL  
Sbjct: 84  DASNQIGYLSSIGMAKSWLWPPDLIQNVMEQIHFYAGLPWWATICVTTVLARVLLFPLYV 143

Query: 381 KQYVSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436
           K   +      I+P++D++             Q +     +L   + I         ++Q
Sbjct: 144 KYSDTLGRTSKIKPEMDKVNADLMACSDTTKAQQIAMKRRKLLSENGIK-NRYLIVPVVQ 202

Query: 437 IPV----FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IP+    F +I ++    ++        W ++L  ADP           F          
Sbjct: 203 IPIAISFFTSIREMCLYPVDGLATQGIAWFQNLTLADPYLGLQCLTAAMFVALARKGGE- 261

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
                    F                +  ++P++ +    +  AG+++Y + + V S++Q
Sbjct: 262 ----SGAQQF----------SPQMKKVFTYLPILTIPVTMNLSAGVVLYLAVNGVCSMIQ 307

Query: 553 QAVIMKMHGAE 563
             ++ +   A 
Sbjct: 308 TLLL-RNQTAR 317


>gi|332638886|ref|ZP_08417749.1| 60 kDa inner membrane protein [Weissella cibaria KACC 11862]
          Length = 314

 Score = 70.8 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 89/257 (34%), Gaps = 46/257 (17%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
              +          +   +       G +I++ T  V+L+  P+   Q       +    
Sbjct: 22  HADFLEGPLTSFMHMSEDWIGGTNAVGWSIVILTFVVRLILLPMMIHQQRGATIQQEKMR 81

Query: 395 KIDELREKFKQSPPQVLQKA--------MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444
            +     K +++      +         M+ +Y+ + ++ L G     +++Q PVF  +Y
Sbjct: 82  LLQPQMSKIQEAQKTAQTQEEKMLASQAMMAVYRENGVSMLGGMNFATLIIQWPVFMGLY 141

Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
             I  S E+ HA F+G   +L +  P                     +  I  +++  +Q
Sbjct: 142 AAIKNSHEIAHATFFG--INLGSQSP---------------------VLAIATAVAYGVQ 178

Query: 505 MKMSPPPADKGQAMILN-------WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             +S       Q   +         M ++  +  +    G+ +Y+    ++ I+Q  +I+
Sbjct: 179 AYLSLIGIPAEQKKQMQSMMLMMPIMMLIMTWVTNG---GIALYFFVGALVMIIQTLIII 235

Query: 558 KMHGAEIGLIDRLRSTF 574
                   L  ++  TF
Sbjct: 236 ---VWRPKLRAQVAETF 249


>gi|300780162|ref|ZP_07090018.1| preprotein translocase YidC subunit [Corynebacterium genitalium
           ATCC 33030]
 gi|300534272|gb|EFK55331.1| preprotein translocase YidC subunit [Corynebacterium genitalium
           ATCC 33030]
          Length = 387

 Score = 70.8 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 103/297 (34%), Gaps = 74/297 (24%)

Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++ +++ +           ++ +AI+  T  +++        Q  +   
Sbjct: 1   MLNFIYWPISAVLWFWHKIFGYIFSPDSGASWLLAIVFLTFTIRIFLVKPMVNQLRAGRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ +QP++ E+R K+K    Q +     ++YK   +NPLA C   L+Q+PVF  ++ V+ 
Sbjct: 61  MQELQPQLQEIRAKYKN-DQQKMAMETQKVYKEAKMNPLASCIVPLVQLPVFIGLFHVLR 119

Query: 449 I-------------SLEM--RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
                         S+E     A +    +D+ +     IF +       +P        
Sbjct: 120 SFNRTGTGAGGLGMSIEQNRNTANYIFSPEDVQSFLDARIFGIPLSSYMSMPEEQFAAFA 179

Query: 494 P-------IIMSL-----------------SMFIQMK----------------------- 506
           P       IIM                   SM  Q K                       
Sbjct: 180 PVDFTRMNIIMVALPLVLICVVMTHLNARLSMSRQRKRMAKKKAEDELRGKKPSQDGPLS 239

Query: 507 --MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
             M          M+L ++P   +F    +  GL+ Y   +NV ++VQ  ++     
Sbjct: 240 PEMMETQMKTMNGMMLWFLPATLLFTGFLWHIGLLTYMVSNNVWTLVQTKLVFDKMD 296


>gi|86609684|ref|YP_478446.1| inner membrane protein translocase component YidC [Synechococcus
           sp. JA-2-3B'a(2-13)]
 gi|86558226|gb|ABD03183.1| inner membrane protein OxaA [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 396

 Score = 70.8 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 8/110 (7%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-----KGQAMILNWMPVVFVFALS 532
           G           +    +I  +S+++   ++    D       Q+ +    PV+F     
Sbjct: 260 GAFDEDGTIHWDIIAMIVIFGVSIYLNQYLTNAGQDTGKEDPSQSSMARITPVLFSAMFL 319

Query: 533 SFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            FP  AG+++Y   SN+   VQ  ++ +       L   +     +   +
Sbjct: 320 FFPLPAGVLLYILVSNIFQTVQTFLLSR-EPLPENLQQLVEEERRRAAQA 368



 Score = 61.2 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 69/121 (57%), Gaps = 5/121 (4%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN-- 391
           +D+G  +     M  ++ +FY +V ++G+AI+  T+ ++   +PL      +   MK   
Sbjct: 1   MDFGVGFLSNNVMLPILDFFYGIVPSYGLAIIFLTLVIRFALYPLNVGSIRNMRRMKVIS 60

Query: 392 --IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
             +Q ++ EL+EK++   PQ L++A  +LY     NPL GC P+L+Q+PV FA++  +  
Sbjct: 61  PVMQRRMRELQEKYRD-DPQKLREAQAKLYSELGANPLGGCLPLLIQMPVLFALFATLRG 119

Query: 450 S 450
           S
Sbjct: 120 S 120


>gi|239612262|gb|EEQ89249.1| mitochondrial Oxa1p [Ajellomyces dermatitidis ER-3]
 gi|327353214|gb|EGE82071.1| mitochondrial Oxa1p [Ajellomyces dermatitidis ATCC 18188]
          Length = 498

 Score = 70.4 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 47/335 (14%), Positives = 108/335 (32%), Gaps = 43/335 (12%)

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFH--SQFKYLSDGHARYQAKFSANEITILP 298
            + +   + +  G+    W+   +P+   S    +         A   A  + +     P
Sbjct: 41  QLRSRTSTQNASGLISTSWSPGLLPAAGASSSRFNSTAASPSPAAEPAASVAIDSTVNAP 100

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
             S        + A          +      +   I   + +  ++ +  ++   +   G
Sbjct: 101 VSSGAQAIDSLSAADLVSV--DISQIPEKLGYLKAIGLDYGWGPSRVIETVLESLHIYGG 158

Query: 359 NFGIAI-MLTTVFVKLLFFPLAKKQYVS-------TANMKNIQPKIDELREKFKQSPPQV 410
                  + T+V ++L     A     +           +  Q +I     +      Q 
Sbjct: 159 LPWWGAAIGTSVLLRLFVLKFAMGASDTSAKVASIKHITQPFQVEIQRCYRENDTVGLQR 218

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLA 466
           + +    + ++H+I  L      L+Q+P+ F  ++V+     +      +  + W+ ++ 
Sbjct: 219 VLQQRKIINESHDIK-LRRLAYPLVQLPLSFGAFRVLRGMSALPVPGLDSESFLWLSNVT 277

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAM---IL 520
             DP                     I PI   L M    K+   +    D    M   IL
Sbjct: 278 VHDPYF-------------------ILPITTGLIMHYTFKLGGENAGANDPTAMMAKPIL 318

Query: 521 NW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
            + +P++     S  P  L I+++ ++V++I Q  
Sbjct: 319 LYGLPILSTVCTSFLPGILQIFFATTSVLAIGQSY 353


>gi|213400715|gb|ACJ47006.1| hypothetical protein [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 171

 Score = 70.4 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 62/164 (37%), Positives = 93/164 (56%), Gaps = 2/164 (1%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282
            +  L E  Y DI K  +     S  +W G +DKYW +  IP K    +   K+ + +  
Sbjct: 8   FNNKLEEWTYKDISKKRLIKASTSEKNWFGFADKYWLTAIIPKKSDKINVSIKHTNVNNI 67

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
            ++QA F      ILPG S +T N+ FAGAK+   +  Y+  L IP F+  +D+G  YFI
Sbjct: 68  DKFQADFVRPYTHILPGTSASTLNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFI 127

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            KP+F+L+ YF  ++ NFG+AI+L T+ +KLL  PL+ + Y+S 
Sbjct: 128 TKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYISM 171


>gi|325912104|ref|ZP_08174502.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           UPII 143-D]
 gi|325476054|gb|EGC79222.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           UPII 143-D]
          Length = 319

 Score = 70.4 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            G + +I       +      V N        G AI++ T  ++L+  PL          
Sbjct: 35  VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94

Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
            +        Q  + +   K   +    L +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 95  QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S  +  + F G                   +    P  +   +  I+    
Sbjct: 155 MGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192

Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             IQ  +S     + Q   +       P++ +     +   L +Y+    ++ ++QQ + 
Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +      +   +    +KN   +
Sbjct: 252 TFILM--PKVRADVDKELTKNPIKE 274


>gi|73661782|ref|YP_300563.1| lipoprotein precursor [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494297|dbj|BAE17618.1| truncated lipoprotein precursor [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 191

 Score = 70.4 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 71/187 (37%), Gaps = 35/187 (18%)

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINP---LAGCWPIL 434
            ++     + +QP+ID L+E  K +  Q  +      ++  YK ++INP   + GC PIL
Sbjct: 1   MHMMREKTEVVQPQIDTLKENVKLAKTQEEKLEANKLLMDTYKQYDINPLKNMIGCLPIL 60

Query: 435 LQIPVFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +Q+P+ + +   +       +   P + W            F L     +          
Sbjct: 61  IQLPILYGLIITLKFPSDGGIDSHPHFLW------------FNLTEPNLWIS-------- 100

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
             +I ++  F Q  ++     K Q      ++   P+   +      + L +YW+   + 
Sbjct: 101 --LIAAVVYFFQTLVNAIHYPKDQRKTHYVLMILSPIFITYISLQSASALGLYWTVGGLF 158

Query: 549 SIVQQAV 555
            I+Q   
Sbjct: 159 LIIQMHF 165


>gi|300859432|ref|YP_003784415.1| hypothetical protein cpfrc_02015 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686886|gb|ADK29808.1| putative membrane protein [Corynebacterium pseudotuberculosis
           FRC41]
          Length = 406

 Score = 70.4 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 97/269 (36%), Gaps = 50/269 (18%)

Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
                 P+  +M  ++  + N         + +++    + V+ +  P    Q  S    
Sbjct: 8   IEIFIYPVSGVMKLWHLFLANMLGVPASLAWALSLFALVITVRGIVAPFTWIQLKSGRAG 67

Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
             ++PK+  L+E++++   +      Q+   +L+K +  +  +GC P L+QIPVF  +Y+
Sbjct: 68  ILMRPKLKRLQEEYEEKTDKESILEYQQKQKELHKEYGYSVKSGCVPALIQIPVFLGLYQ 127

Query: 446 VISIS---LEMRHAPFWGWIKDLAAADPTNIF------------------TLFGILPFYL 484
           V+      +E   A     I  L++ D +                         +   Y 
Sbjct: 128 VLLRMARPVEGLDANNHAPIGLLSSDDVSAFLESRVSDVPLPAYNAMSAEQFARLNTTYD 187

Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPAD---------KGQAMILNWMPVVFVFALS--- 532
                V    I   +   I + +S    +           Q   L  + + F   +    
Sbjct: 188 AVHAFVTPLIIAACVFTVINLIISVVRNNYSVDHDSGLAVQLNRLLIIMIFFTPLMLISL 247

Query: 533 ----SFPAGLIIYWSWSNVISIVQQAVIM 557
                 PA + +YW  +N+ +++Q A++ 
Sbjct: 248 GLRSPIPAAICMYWVANNLWTLIQNALMY 276


>gi|325474002|gb|EGC77190.1| inner membrane protein [Treponema denticola F0402]
          Length = 901

 Score = 70.4 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 95/223 (42%), Gaps = 17/223 (7%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNF-GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           +   + Y +   +  ++    N+  +  G++I++ ++ + L+  P+           + I
Sbjct: 5   LYTIFIYPVYMFVEFILFIANNITQDHIGLSIIILSLGINLITLPIYNVAEKWQEMERII 64

Query: 393 QPKIDE----LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           Q ++      ++  FK     ++  A  +    H +  L   + + +QIP F A Y+++S
Sbjct: 65  QKRMKPKVNDIKAVFKGDERYMILSAYYRQNNYHPLYALRSLFALFIQIPFFIAAYQLLS 124

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
               ++    + ++KDL A D                G + + + PIIM++       + 
Sbjct: 125 ELPALKETS-FLFLKDLGAPDK-----------LINIGSVSLNLLPIIMTVINIAASAVY 172

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
               +    + L     +F+  L + P+GL++YW+ +N+ S+ 
Sbjct: 173 TKDLELKDKLTLYLTAFLFLILLYNSPSGLVLYWTLNNIFSLF 215


>gi|21221301|ref|NP_627080.1| membrane protein [Streptomyces coelicolor A3(2)]
 gi|6689184|emb|CAB65581.1| putative membrane protein [Streptomyces coelicolor A3(2)]
          Length = 237

 Score = 70.4 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 17/211 (8%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L T  V+LL  PL++           +QP+I ELR K  ++P + LQ+A+++L+    
Sbjct: 28  IILFTALVRLLVHPLSRAAARGQKARTRLQPRIAELRRKHAKNPEK-LQRAVLELHAEEK 86

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF-GILPF 482
           ++PL+GC P L QIP FF +Y + S S            + LAA         F      
Sbjct: 87  VSPLSGCLPSLCQIPAFFLLYHLFSSSTIGGEVNGLLSHQLLAAPLGGRWADAFGDGGLL 146

Query: 483 YLPGFMHVGIWPIIMSLSMFIQ--MKMSP------PPAD----KGQAMILNWMPVVFVFA 530
              G ++V ++ ++  ++ F     + +       P  D     G   +   MP +  F 
Sbjct: 147 GGAGLVYVALFAVVAGVATFSYRLTRRTMADRPVLPAGDAGAVPGVGALTRVMPFMSFFT 206

Query: 531 LSS---FPAGLIIYWSWSNVISIVQQAVIMK 558
           L +    P    +Y   S   S V++AV+ +
Sbjct: 207 LVTVAVVPLAAALYVVTSTTWSAVERAVLYR 237


>gi|261202448|ref|XP_002628438.1| mitochondrial Oxa1p [Ajellomyces dermatitidis SLH14081]
 gi|239590535|gb|EEQ73116.1| mitochondrial Oxa1p [Ajellomyces dermatitidis SLH14081]
          Length = 498

 Score = 70.4 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 47/335 (14%), Positives = 108/335 (32%), Gaps = 43/335 (12%)

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFH--SQFKYLSDGHARYQAKFSANEITILP 298
            + +   + +  G+    W+   +P+   S    +         A   A  + +     P
Sbjct: 41  QLRSRTSTQNASGLISTSWSPGLLPAAGASSSRFNSTAASPSPAAEPAASVAIDSTVNAP 100

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
             S        + A          +      +   I   + +  ++ +  ++   +   G
Sbjct: 101 VSSGAQAIDSLSAADLVSV--DISQIPEKLGYLKAIGLDYGWGPSRVIETVLESLHIYGG 158

Query: 359 NFGIAI-MLTTVFVKLLFFPLAKKQYVS-------TANMKNIQPKIDELREKFKQSPPQV 410
                  + T+V ++L     A     +           +  Q +I     +      Q 
Sbjct: 159 LPWWGAAIGTSVLLRLFVLKFAMGASDTSAKVASIKHITQPFQVEIQRCYRENDTVGLQR 218

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLA 466
           + +    + ++H+I  L      L+Q+P+ F  ++V+     +      +  + W+ ++ 
Sbjct: 219 VLQQRKIINESHDIK-LRRLAYPLVQLPLSFGAFRVLRGMSALPVPGLDSEAFLWLSNVT 277

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAM---IL 520
             DP                     I PI   L M    K+   +    D    M   IL
Sbjct: 278 VHDPYF-------------------ILPITTGLIMHYTFKLGGENAGANDPTAMMAKPIL 318

Query: 521 NW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
            + +P++     S  P  L I+++ ++V++I Q  
Sbjct: 319 LYGLPILSTVCTSFLPGILQIFFATTSVLAIGQSY 353


>gi|225028842|ref|ZP_03718034.1| hypothetical protein EUBHAL_03129 [Eubacterium hallii DSM 3353]
 gi|224953838|gb|EEG35047.1| hypothetical protein EUBHAL_03129 [Eubacterium hallii DSM 3353]
          Length = 428

 Score = 70.4 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 492 IWPIIMSLSMFIQMKMSPPP-------ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
           + PI+ +L  ++  K    P       A      +   MP++ ++     PAGL IYW  
Sbjct: 241 LIPILAALFQYLSAKTMKQPELDGNNPAAGMTKSMTVMMPLMSLYFCLVTPAGLGIYWVT 300

Query: 545 SNVISIVQQAVIMKMHG 561
           S +   +QQ +I K   
Sbjct: 301 SALFQCLQQVIINKYMD 317



 Score = 60.8 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 6/122 (4%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
               GW   +   +   + Y  N +   N G+ I++ T+ V+LL  PL  KQ       +
Sbjct: 8   TPIIGWIATLLGYVMEFIFYCLNFIGIQNIGLCIIIFTIIVRLLMLPLTIKQQKFAKISQ 67

Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            +QP+I++++ K++    Q       + + ++Y+ +  NP  GC  +++Q+P+F A+Y+V
Sbjct: 68  VMQPEINKIQRKYRNKTDQASMMKQNEEIQKVYEKYGTNPTGGCLQLVVQMPIFLALYQV 127

Query: 447 IS 448
           I 
Sbjct: 128 IR 129


>gi|325474004|gb|EGC77192.1| hypothetical protein HMPREF9353_01542 [Treponema denticola F0402]
          Length = 954

 Score = 70.4 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 21/230 (9%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
            G  Y     +  + +Y YN+ GN+GIA++L ++F+  +  PL           K +Q K
Sbjct: 9   TGLLYPFVVLIQTVFTYSYNICGNYGIALILLSLFITAITAPLYYLAERWKNKEKVVQKK 68

Query: 396 I----DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +      + E ++      L KA  ++Y           + +++QIP FFA Y+V+S   
Sbjct: 69  MHKDIKSINENYEGQKRFYLTKAARKIYDYKWWYTFRTSFGLIIQIPFFFAAYEVLSKYS 128

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
                  + +IKDL   D                    V + P +M+L            
Sbjct: 129 GYNGVS-FLFIKDLGLPD---------------NLVSGVNVLPFVMTLINIAYSIYYTKS 172

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
                   L  M  +F+  L + P+ L++YW+ +NV S + + +I++  G
Sbjct: 173 KSWNANKELYIMAGIFLVLLYNSPSALLLYWTMNNVFSFI-KGIILRKAG 221


>gi|37521800|ref|NP_925177.1| putative inner membrane protein translocase component YidC
           [Gloeobacter violaceus PCC 7421]
 gi|35212798|dbj|BAC90172.1| glr2231 [Gloeobacter violaceus PCC 7421]
          Length = 369

 Score = 70.4 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 492 IWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVF--VFALSSFPAGLIIYWSWSN 546
           +  ++  +S++    M+    P   + Q  I    P +F  +F     PAG+++Y   SN
Sbjct: 261 LMIVLFGVSLYFSQNMTAKHNPSMTEQQKQINKITPFIFSGMFVFFPLPAGVLLYILLSN 320

Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           +  IVQ  ++ +       L + ++    +    +
Sbjct: 321 LFQIVQTYLLYR-----EPLPENIQRILDQAKRKE 350



 Score = 58.5 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/120 (30%), Positives = 70/120 (58%), Gaps = 4/120 (3%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ + Y +V N+G+ I+L T+ VK L +PL      S   M+ +Q
Sbjct: 1   MDFGVGFLTNSVMLPILDFLYRIVPNYGVGIVLLTLIVKGLLWPLTAGSIRSMRKMQVVQ 60

Query: 394 PKIDELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P++    ++ ++   + P+ +Q+ M  LYK +  NPLAGC P+++Q+P+ FA++  +  S
Sbjct: 61  PEMQRRTKEIQEKYKNEPERMQQEMAGLYKEYG-NPLAGCLPLVVQMPILFALFATLRGS 119


>gi|313665770|ref|YP_004047641.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma leachii
           PG50]
 gi|312949391|gb|ADR23987.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma leachii
           PG50]
          Length = 396

 Score = 70.4 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 90/222 (40%), Gaps = 16/222 (7%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-- 413
              +   AI LTT+ +K +      K  ++   M++IQ K+ +++ K+K       ++  
Sbjct: 160 YGISAIFAIFLTTLLIKGITLSFGWKSQINQEKMQDIQLKVADIQAKYKDKKDMQSKQKQ 219

Query: 414 --AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
              +  LYK  N++  +        +P  FAIY ++  +  ++ A        +A  +  
Sbjct: 220 QLEIQALYKKENMSQFSALAGSFAPLPFLFAIYAIVRSTRALKIAAVG----PIALIEGP 275

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAM------ILNW-M 523
                 G   + +   +++ +  I M L   +QMK        + Q        I+   M
Sbjct: 276 WQQITAGNYIYIIILAIYLPLQAISMLLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVM 335

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             VF+  + S   G+ IYW +S+V+ I+Q       +  +  
Sbjct: 336 MFVFIIIIVSVATGVCIYWIFSSVLQIIQTYAFYLYNEKKRK 377


>gi|331703940|ref|YP_004400627.1| membrane protein OxaA [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802495|emb|CBW54650.1| Membrane protein OxaA [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 388

 Score = 70.4 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 16/211 (7%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-- 413
              +   AI LTT+ +K +      K  ++   M++IQ KI +++ K+K       ++  
Sbjct: 152 YGISAIFAIFLTTLLIKGITLSFGWKSQINQEKMQDIQLKIADIQAKYKDKKDMQSKQKQ 211

Query: 414 --AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
              +  LYK  N++  +        +P  FAIY ++  +  ++ A        +A  +  
Sbjct: 212 QLEIQALYKKENMSQFSALAGSFAPLPFLFAIYAIVRSTRALKIAAVG----PIALIEGP 267

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAM------ILNW-M 523
                 G   + +   +++ +  + M L   +QMK        + Q        I+   M
Sbjct: 268 WQQITSGNYIYIIILAIYLPLQAVSMLLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVM 327

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
             VF+  + S   G+ IYW +S+V+ I+Q  
Sbjct: 328 MFVFIIIIVSVATGVCIYWIFSSVLQIIQTY 358


>gi|302207109|gb|ADL11451.1| Preprotein translocase subunit YidC [Corynebacterium
           pseudotuberculosis C231]
 gi|308277364|gb|ADO27263.1| Preprotein translocase subunit YidC [Corynebacterium
           pseudotuberculosis I19]
          Length = 415

 Score = 70.4 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 97/269 (36%), Gaps = 50/269 (18%)

Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
                 P+  +M  ++  + N         + +++    + V+ +  P    Q  S    
Sbjct: 17  IEIFIYPVSGVMKLWHLFLANMLGVPASLAWALSLFALVITVRGIVAPFTWIQLKSGRAG 76

Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
             ++PK+  L+E++++   +      Q+   +L+K +  +  +GC P L+QIPVF  +Y+
Sbjct: 77  ILMRPKLKRLQEEYEEKTDKESILEYQQKQKELHKEYGYSVKSGCVPALIQIPVFLGLYQ 136

Query: 446 VISIS---LEMRHAPFWGWIKDLAAADPTNIF------------------TLFGILPFYL 484
           V+      +E   A     I  L++ D +                         +   Y 
Sbjct: 137 VLLRMARPVEGLDANNHAPIGLLSSDDVSAFLESRVSDVPLPAYNAMSAEQFARLNTTYD 196

Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPAD---------KGQAMILNWMPVVFVFALS--- 532
                V    I   +   I + +S    +           Q   L  + + F   +    
Sbjct: 197 AVHAFVTPLIIAACVFTVINLIISVVRNNYSVDHDSGLAVQLNRLLIIMIFFTPLMLISL 256

Query: 533 ----SFPAGLIIYWSWSNVISIVQQAVIM 557
                 PA + +YW  +N+ +++Q A++ 
Sbjct: 257 GLRSPIPAAICMYWVANNLWTLIQNALMY 285


>gi|311741703|ref|ZP_07715525.1| preprotein translocase YidC subunit [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311303224|gb|EFQ79305.1| preprotein translocase YidC subunit [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 325

 Score = 70.4 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 57/289 (19%), Positives = 106/289 (36%), Gaps = 66/289 (22%)

Query: 338 WFYFIAKPMFMLMSYFYN---------LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
              FI  P+  ++ +++              + +AI+L T  +K L       Q  S+  
Sbjct: 1   MLNFIYWPISAVLWFWHWLLSLVMDPAWGITWILAIVLLTWTLKALMVKPTISQIRSSRK 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
           M+ IQPK+ E+R K+     +   + M ++YK   + P+AGC P+ +QIP+F  ++ V+ 
Sbjct: 61  MQEIQPKVQEIRAKYGNDQTKA-AQEMQKVYKESGVRPMAGCLPVFVQIPMFVGLFHVLR 119

Query: 449 I-------------------SLE-MRHAPFWGWIKDLAAA-------DPTNIFTLFGILP 481
                               S+E   +   + +  DL          D   +  L    P
Sbjct: 120 SFDRTVAVAGGIGHPSGDPMSIEDNANTANYIFKPDLVQQFLDAKIFDVPLVTNLRLNSP 179

Query: 482 ------FYLPGFMHVGIWPIIMSLSMF-IQMKMSPP----PADKGQA------------- 517
                       + V +  +I  ++ F  +M ++       A K QA             
Sbjct: 180 IVEGVTTSQAAVIIVPMIAVIAVMTHFNARMSLNRQEKRRAAGKTQAPQGQNAEMMQQQM 239

Query: 518 -----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
                M+L   PV+ +     +P GL+ Y   + V +  Q  ++     
Sbjct: 240 AMMSKMMLWVAPVMLILTGFIYPIGLLFYMLANTVWTFFQTRIVYAKMD 288


>gi|167750238|ref|ZP_02422365.1| hypothetical protein EUBSIR_01212 [Eubacterium siraeum DSM 15702]
 gi|167656800|gb|EDS00930.1| hypothetical protein EUBSIR_01212 [Eubacterium siraeum DSM 15702]
          Length = 441

 Score = 70.4 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 16/159 (10%)

Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
             +  Q P  F   K++S  ++ R A        L+                     + +
Sbjct: 234 LQVYEQYPDTFKESKILSDDVKGRLAS-------LSHNMMFCGLNFGSTPKLAFEPLIII 286

Query: 491 GIWPIIMSL-----SMFIQMKMSPPPADK--GQAMILNW-MPVVFVFALSSFPAGLIIYW 542
            I+  ++SL     S ++  K +P  A+       ++ + MP+  ++   S PAG+  YW
Sbjct: 287 PIFAFVLSLVQTVLSQYLNKKNNPEMANAGGAGMKVMLYLMPLFSLWISFSVPAGVGFYW 346

Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +  + IVQ  V+ K++  E  L         +    +
Sbjct: 347 GVNYALGIVQSLVMQKLYSPE-KLRAEAEEKMKERKLKE 384



 Score = 51.1 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           M   Y L+ NFG AI++ TV VK+   PL  KQ  + A  +   PK+ E+++K++ +  +
Sbjct: 1   MWPIYLLLQNFGWAILIFTVIVKIAMLPLQIKQQKNMAFSQLFAPKVKEIQQKYRNNRDK 60

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
             Q   +Q  +    NP  GC P++L + + F +  V+ 
Sbjct: 61  --QAEEMQKLQAQGYNPAGGCGPLILTMVILFGVIDVVY 97


>gi|291531377|emb|CBK96962.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
           [Eubacterium siraeum 70/3]
          Length = 441

 Score = 70.4 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 16/159 (10%)

Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
             +  Q P  F    ++S +++ R A        L+                     + +
Sbjct: 234 LQVYEQYPDTFKESNILSDNVKGRLAS-------LSHNMMFCGLNFGTTPKLAFEPLIII 286

Query: 491 GIWPIIMSL-----SMFIQMKMSPPPADKG---QAMILNWMPVVFVFALSSFPAGLIIYW 542
            I+  ++SL     S ++  K +P  A+ G     ++L  MP+  ++   S PAG+  YW
Sbjct: 287 PIFAFVLSLVQTVLSQYLNKKNNPEMANAGGAGMKVMLYIMPLFSLWISFSVPAGVGFYW 346

Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +  + IVQ  V+ K++  E  L         +    +
Sbjct: 347 GVNYALGIVQSLVMQKLYSPE-KLRAEAEEKMKERKLKE 384



 Score = 51.1 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           M   Y L+ NFG AI++ TV VKL   PL  KQ  + A  +   PK+ E+++K++ +  +
Sbjct: 1   MWPIYLLLQNFGWAILIFTVIVKLAMLPLQIKQQKNMAFSQLFAPKVKEIQQKYRNNRDK 60

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
             Q   +Q  +    NP  GC P++L + + F +  V+ 
Sbjct: 61  --QAEEMQKLQAQGYNPAGGCGPLVLTMIILFGVIDVVY 97


>gi|284931019|gb|ADC30957.1| putative inner membrane protein translocase component YidC
           [Mycoplasma gallisepticum str. F]
          Length = 383

 Score = 70.4 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 16/202 (7%)

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437
                         I     + +        ++ Q  ++ +YK H I P A      + I
Sbjct: 170 STLNTERMGEVQGKIAEINAKYKNATDTQSKKMKQIEVMHIYKKHKIKPAALFVQGFVTI 229

Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
           P+F  +YK++S++  ++ A     I DL+    T I +       Y+   + V    I+ 
Sbjct: 230 PIFLIVYKMVSLTRPIK-ATILFGIWDLSVTPGTEIISDISRNWVYIFFVLLVVPMQIVS 288

Query: 498 -SLSMFIQMKMSPPPADKGQA---------MILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
             L  F   + +       Q           I   +  VF       P+ + +YW  +++
Sbjct: 289 QWLPQFWATRRNRNAKTTSQKGLEQLKKTRRIQWILIFVFALFPVITPSAVGLYWFLNSI 348

Query: 548 ISIVQQA-----VIMKMHGAEI 564
            +I+Q       ++ +    + 
Sbjct: 349 FTILQSYITHVFIVKRRQRTKT 370


>gi|31544213|ref|NP_852791.1| putative inner membrane protein translocase component YidC
           [Mycoplasma gallisepticum str. R(low)]
 gi|38502878|sp|P60035|OXAA_MYCGA RecName: Full=Membrane protein oxaA
 gi|31541057|gb|AAP56359.1| putative inner membrane protein translocase component YidC
           [Mycoplasma gallisepticum str. R(low)]
 gi|284930251|gb|ADC30190.1| putative inner membrane protein translocase component YidC
           [Mycoplasma gallisepticum str. R(high)]
          Length = 383

 Score = 70.0 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 16/202 (7%)

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437
                         I     + +        ++ Q  ++ +YK H I P A      + I
Sbjct: 170 STLNTERMGEVQGKIAEINAKYKNATDTQSKKMKQIEVMHIYKKHKIKPAALFVQGFVTI 229

Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
           P+F  +YK++S++  ++ A     I DL+    T I +       Y+   + V    I+ 
Sbjct: 230 PIFLIVYKMVSLTRPIK-ATILFGIWDLSVTPGTEIISDISRNWVYIFFVLLVVPMQIVS 288

Query: 498 -SLSMFIQMKMSPPPADKGQA---------MILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
             L  F   + +       Q           I   +  VF       P+ + +YW  +++
Sbjct: 289 QWLPQFWATRRNRNAKTTSQKGLEQLKKTRRIQWILIFVFALFPVITPSAVGLYWFLNSI 348

Query: 548 ISIVQQA-----VIMKMHGAEI 564
            +I+Q       ++ +    + 
Sbjct: 349 FTILQSYITHVFIVKRRQRTKT 370


>gi|312871831|ref|ZP_07731919.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LEAF 3008A-a]
 gi|311092773|gb|EFQ51129.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LEAF 3008A-a]
          Length = 319

 Score = 70.0 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            G + +I       +      V N        G AI++ T  ++L+  PL          
Sbjct: 35  VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94

Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
            +        Q  + +   K   +    L +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 95  QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S  +  A F G                   +    P  +   +  I+    
Sbjct: 155 IGIYQAVAYSKTLASASFMG-------------------ISLSKPSIVFAVVAAILY--- 192

Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             IQ  +S     + Q   +       P++ +     +   L +Y+    ++ ++QQ + 
Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +      +   +    +K+   +
Sbjct: 252 TFILM--PKVRSDVDKELTKHPIKE 274


>gi|312872933|ref|ZP_07732993.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LEAF 2062A-h1]
 gi|311091455|gb|EFQ49839.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LEAF 2062A-h1]
          Length = 319

 Score = 70.0 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            G + +I       +      V N        G AI++ T  ++L+  PL          
Sbjct: 35  VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94

Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
            +        Q  + +   K   +    L +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 95  QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S  +  + F G                   +    P  +   +  I+    
Sbjct: 155 MGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192

Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             IQ  +S     + Q   +       P++ +     +   L +Y+    ++ ++QQ + 
Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +      +   +    +KN   +
Sbjct: 252 TFILM--PKVRADVDKELTKNPIKE 274


>gi|291539803|emb|CBL12914.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
           [Roseburia intestinalis XB6B4]
          Length = 430

 Score = 70.0 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 12/117 (10%)

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP----------ADK 514
           L  +D                  +   + P+I  L+  + +K+ P               
Sbjct: 230 LNISDTPWQVMTTNFASHNFLFVVLALLVPVISYLTQVLNIKLMPQAAPSNGNSDNDMAA 289

Query: 515 GQAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
            Q  ++N  MP+       + P GL IYW    V+  VQQ  + K H  +I L D +
Sbjct: 290 QQMKMMNRTMPIFSFVMCFTVPVGLGIYWIAGAVVRSVQQFFLNK-HFEKINLEDII 345



 Score = 51.5 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 61/122 (50%), Gaps = 6/122 (4%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           +        ++   ++ LMS     + N G++I++ T+ +  + FPL  KQ   +   + 
Sbjct: 11  LGPIAKVLGWVMNGIYALMSMIG--IENVGLSIIIFTIVIYAILFPLTYKQQKFSKLSQK 68

Query: 392 IQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           +QP++  +++K+     Q     +Q+    +Y+ + ++ +  C  +L+Q+P+  A+Y+V 
Sbjct: 69  MQPELQAIQKKYNGKKDQASMMAMQEETQAVYEKYGVSMMGSCVQMLIQMPLLCALYRVF 128

Query: 448 SI 449
             
Sbjct: 129 LN 130


>gi|323486758|ref|ZP_08092077.1| SpoJ protein [Clostridium symbiosum WAL-14163]
 gi|323694900|ref|ZP_08109050.1| hypothetical protein HMPREF9475_03914 [Clostridium symbiosum
           WAL-14673]
 gi|323399897|gb|EGA92276.1| SpoJ protein [Clostridium symbiosum WAL-14163]
 gi|323500990|gb|EGB16902.1| hypothetical protein HMPREF9475_03914 [Clostridium symbiosum
           WAL-14673]
          Length = 414

 Score = 70.0 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 10/120 (8%)

Query: 471 TNIFTLFGILPFYLPGFMHVGIW-PIIMSLSMFIQMKM--SPPPADK------GQAMILN 521
           + +       PF     + +    PI+  L+ +   K+  +    D           ++ 
Sbjct: 221 SFLGINLATAPFTGFTNISIAWLIPILAGLTQWFSTKLMSNTQQMDPDAPGAQTMNTMMM 280

Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            MP+V VF   +FPA + IYW       IVQQ  +      ++ + + ++    K    +
Sbjct: 281 TMPLVSVFFCFTFPAAIGIYWVVQGAFQIVQQLAVNSYM-NKVDMDELIQKNVDKMNKKR 339



 Score = 54.2 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 4/97 (4%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412
           + N G+ I+L T+  KLL FPL  KQ  S+  M  + P+I  +++K+K    Q      Q
Sbjct: 36  ILNLGLCIILFTIITKLLLFPLTIKQQKSSKLMSLMNPEIQAVQKKYKGKKDQTSMTKQQ 95

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
             M  +Y+ +  +P AGC P+L+Q P+  A+Y+VI  
Sbjct: 96  MEMQAIYEKYGSSPTAGCLPMLIQFPIIIALYRVIYN 132


>gi|293400061|ref|ZP_06644207.1| stage III sporulation protein J [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306461|gb|EFE47704.1| stage III sporulation protein J [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 329

 Score = 70.0 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 90/256 (35%), Gaps = 39/256 (15%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F   +D GWF+ I       +  +     + GI I+  T  ++LL F  + K  V+   M
Sbjct: 81  FSDAMDEGWFHGIIVYPIAQLINWVANFTDAGIGIIAATFLIQLLIFLFSIKSQVANQRM 140

Query: 390 KNIQPKIDELREKF----KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + +QP++ +++ K+             + M  LY  + INP        +Q PV   +Y+
Sbjct: 141 QALQPEMQKIQAKYAGRTDDRSKMAQAQEMQALYSKYKINPFGTLLITFIQFPVILGMYQ 200

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
               +  +    F G            I      +     G +  G+  I+M L   +  
Sbjct: 201 ATMRAYSVVTGHFAG------------INLAKTPIEGLKEGQIAFGVIFILMVLFQLLSF 248

Query: 506 KM-----------------------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542
           KM                         P       M++     +      ++P G+  YW
Sbjct: 249 KMPQWLQEHRKKKQHVKEKKYAEPKKQPGMMGSMNMMMYMSTAMIAIFAINWPLGMSFYW 308

Query: 543 SWSNVISIVQQAVIMK 558
             ++++ + Q  +I K
Sbjct: 309 LVNSIVRVGQNLLIHK 324


>gi|197102216|ref|NP_001126369.1| mitochondrial inner membrane protein COX18 precursor [Pongo abelii]
 gi|73921530|sp|Q5R7D0|COX18_PONAB RecName: Full=Mitochondrial inner membrane protein COX18; Flags:
           Precursor
 gi|55731232|emb|CAH92330.1| hypothetical protein [Pongo abelii]
          Length = 334

 Score = 70.0 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 63/164 (38%), Gaps = 32/164 (19%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI------------SLEMR-H 455
           + +++ + +LY   N +P      + +Q+P++  +   +              S+E +  
Sbjct: 150 KNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLSTGAAHSEAGFSVEEQLA 209

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           A    W  DL A DPT I                + +  + + +      K+        
Sbjct: 210 AGGILWFSDLTAPDPTWIL---------PVSLGVINLLIVEICVL----QKIGMSR---F 253

Query: 516 QAMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           Q  I  +   M V+ +   ++ P+ +++YW  S+ + + Q  ++
Sbjct: 254 QTYITYFVRAMSVLMIPIAATVPSSIVLYWLCSSFVGLSQNLLL 297


>gi|309806133|ref|ZP_07700152.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LactinV 03V1-b]
 gi|309808392|ref|ZP_07702292.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LactinV 01V1-a]
 gi|308167488|gb|EFO69648.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LactinV 03V1-b]
 gi|308168360|gb|EFO70478.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LactinV 01V1-a]
          Length = 319

 Score = 70.0 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            G + +I       +      V N        G AI++ T  ++L+  PL          
Sbjct: 35  VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94

Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
            +        Q  + +   K   +    L +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 95  QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S  +  + F G                   +    P  +   +  I+    
Sbjct: 155 IGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192

Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             IQ  +S     + Q   +       P++ +     +   L +Y+    ++ ++QQ + 
Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +      +   +    +K+   +
Sbjct: 252 TFILM--PKVRADVDKELAKHPIKE 274


>gi|46122969|ref|XP_386038.1| hypothetical protein FG05862.1 [Gibberella zeae PH-1]
          Length = 485

 Score = 70.0 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 86/245 (35%), Gaps = 34/245 (13%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
            F   I   + +     M   + + +   G  +G  I+ T V ++L+ F    +    +A
Sbjct: 162 GFLKEIGLDYGWGPTSIMQWTLEHIHVYTGLGWGGTIVATAVLLRLVMFYPQVRAVKFSA 221

Query: 388 NMKNIQPK--------IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
            +   +          + +   + K +      + + ++ +  +   + G +   LQIP 
Sbjct: 222 ALNESKKDPRFQEAIDLMKKGYQTKNNEMTQKGQFLNKMVRETHGASMTGMFWPFLQIPF 281

Query: 440 FFAIYKVISISLEMRHAPF-------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
            F ++++I+    M H P        + W  DL  ADP      F  LP     F+   I
Sbjct: 282 SFGLFRIING---MTHIPVPALEDAGFLWFTDLTVADP------FYCLPALGTAFLVSSI 332

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
             +I         K  P         ++  M  V     +   AG+ +  + +   ++V 
Sbjct: 333 --VING-------KYQPAAQRATTKKLMWVMGGVTFAFTTYLAAGVNLMMTTTGAAALVT 383

Query: 553 QAVIM 557
             ++ 
Sbjct: 384 TTLLN 388


>gi|163840009|ref|YP_001624414.1| preprotein translocase YidC subunit [Renibacterium salmoninarum
           ATCC 33209]
 gi|162953485|gb|ABY23000.1| preprotein translocase YidC subunit [Renibacterium salmoninarum
           ATCC 33209]
          Length = 283

 Score = 70.0 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 102/239 (42%), Gaps = 19/239 (7%)

Query: 341 FIAKPMFMLMSYFYNLVGNF------GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           +  +  +  + +  +++  F      G+AI+  T+ V+ +  P    Q         I P
Sbjct: 36  WALEIGYQFLHWLASVLEPFAGAASAGLAIIALTILVRTVLIPAGLSQVSGEIGRARIAP 95

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           ++ E++ K  ++P Q+L +  + LYK+  ++  AG  P LLQ PV   +Y +  ++    
Sbjct: 96  QLKEIQRKHAKNP-QLLSEKTMALYKSEGVSMFAGIGPALLQAPVLMVVYGLFILAQIGG 154

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM---KMSPPP 511
           HA          A    ++  L         G+++ G+  +I++++ + +    +++   
Sbjct: 155 HANTLLDQVFGGAPLGQSVVHLVSTGSMLPAGWVYAGVVAVILAVAEYNRSRALRLNAAG 214

Query: 512 ADK--GQ-------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            D    Q       A IL W+  +       FP    +Y   + V + V++A++ +  G
Sbjct: 215 QDPSATQPAGTGTLARILPWLSYITAVTALFFPLAAALYLMTTTVWTAVERAIMRRALG 273


>gi|167624619|ref|YP_001674913.1| 60 kDa inner membrane insertion protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167354641|gb|ABZ77254.1| 60 kDa inner membrane insertion protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 219

 Score = 70.0 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 92/228 (40%), Gaps = 31/228 (13%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           W  F    +  +      +  + G+AI+L T+ V+LLF P++    +++   K     I 
Sbjct: 4   WTNFTDLLIQTIGFLTTEVGVSQGVAIILLTLVVRLLFSPISCSAMINSYKNKKTMAAIK 63

Query: 398 ELREK---FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL--QIPVFFAIYKVISISLE 452
              +K     +  P  + K  + LY+ H+I  ++      +  Q    F +++V+  ++ 
Sbjct: 64  PELDKLKSVYKDKPNEMAKQTMALYRKHDIKFISKTLVANVSSQAIFGFGMFQVLQKAI- 122

Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
              +  + WI ++A  D                         +++    ++ M M P  A
Sbjct: 123 --FSSKFAWISNIAKPD---------------------IALAMLVGALTYLSMLMMPDSA 159

Query: 513 DKGQAMILNWMPVVFVF-ALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           ++  A +   +P +     L + P+ L +YW+ S+    +Q  V+ K 
Sbjct: 160 EQANA-LFLLIPAMVSVAVLVTAPSALSLYWATSSAFGALQSLVVNKY 206


>gi|195171512|ref|XP_002026549.1| GL21799 [Drosophila persimilis]
 gi|194111465|gb|EDW33508.1| GL21799 [Drosophila persimilis]
          Length = 197

 Score = 70.0 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 27/119 (22%)

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             + ++ +  ++        W +DL  ADP                     I P+I S +
Sbjct: 1   MGLRQMANTPVDSMRDGGLWWFQDLTLADPFY-------------------ILPLITSAT 41

Query: 501 MFIQ-------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +++         ++S    +     +L  +P+V      +FPA ++ YW+ SN IS+ Q
Sbjct: 42  LYLTIEIGTDSARLSAANMNTM-KYVLRALPLVIFPFTMNFPAAILTYWACSNFISLGQ 99


>gi|331002963|ref|ZP_08326475.1| hypothetical protein HMPREF0491_01337 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330413007|gb|EGG92382.1| hypothetical protein HMPREF0491_01337 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 418

 Score = 69.6 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 55/339 (16%), Positives = 111/339 (32%), Gaps = 83/339 (24%)

Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384
           + I            +F     F++   F   + N G+AI++ T+ + ++  PL   Q  
Sbjct: 1   MDIVLLTKSTTPIIGWFAEILGFIMNLIFDIGITNIGVAIIVFTIVINIIMIPLTINQQK 60

Query: 385 STANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINP-------------L 427
           S   M  IQP++  +++K+K          +      +Y  +  +              L
Sbjct: 61  SQKLMAVIQPEVKAIQDKYKGKTDNESAVKMNAETRAVYSKYGTSMTGGCLPLLIQMPIL 120

Query: 428 AGCWPILLQIPVFFAIYKVISISLE---MRHAPFWGWIKDLAAA---------------- 468
            G + ++ +IP +    + I  ++    M+   +   I +LA A                
Sbjct: 121 FGLYQVIYRIPAYVTSVRGIFETVATSLMKEPDYINKISELAKAVRLPIESNDYTITNKV 180

Query: 469 -DPTNIF-----------------------------TLFGILPFYLPGF------MHVGI 492
            D    F                               F  +   +  +          I
Sbjct: 181 IDLLYKFTPEKWTTLSETFPNMSSVLETSIPLIKQMNSFLGIDLSVAPWQGMNNINVAWI 240

Query: 493 WPIIMSLSMFIQMKMS----PPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYW 542
            P++  ++ FI  K+     P  AD           +   MP++ V    +FPAG+ IYW
Sbjct: 241 IPVLAGVTQFISTKVMTVNQPKNADTENEMARQMQSMNTVMPIMSVVFCFTFPAGIGIYW 300

Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             S +   V Q ++      ++ +   + +  +K    +
Sbjct: 301 IASALARTVVQLLVNYRLK-DLDIDKLVENNLAKQNAKR 338


>gi|114594339|ref|XP_001158183.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
          Length = 336

 Score = 69.6 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 60/163 (36%), Gaps = 31/163 (19%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFW-------- 459
           + +++ + +LY   N +P      + +Q+P++  +   +   S    H+  +        
Sbjct: 153 KNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLSTGAAHSEGFSVQEQLAT 212

Query: 460 ---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
               W  DL A D T I                + +  + +        K+        Q
Sbjct: 213 GGILWFPDLTAPDSTWIL---------PISVGVINLLIVEICAL----QKIGMSR---FQ 256

Query: 517 AMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             I  +   M V+ +   ++ P+ +++YW  S+ + + Q  ++
Sbjct: 257 TYITYFVRAMSVLMIPIAATVPSSIVLYWLCSSFVGLSQNLLL 299


>gi|163784042|ref|ZP_02178998.1| hypothetical protein HG1285_01298 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880683|gb|EDP74231.1| hypothetical protein HG1285_01298 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 387

 Score = 69.6 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/419 (12%), Positives = 124/419 (29%), Gaps = 72/419 (17%)

Query: 2   ERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
           +      +   +  +++  +    Q     P  ++   + +     K   +   + A   
Sbjct: 7   DMQKRILLFFVIVSVLLIGYTVINQIINPLPEKQQTEKQPQIQTVNKTVEKSGENTAQEK 66

Query: 58  IDDRAQAL-------------------------SMSPRVELKNPSLIGSINLKGAQFDDL 92
              + +                           ++   +E+K    +  I+  GA+   +
Sbjct: 67  FAKKEEKNIHSNITYSSSGTYDLLLNNLRFKSDNLKDFIEIKTSYGVVKISKIGARVISV 126

Query: 93  NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152
            L  Y+ D            P   K+      + ++T   I    + + +N         
Sbjct: 127 YLNQYNTDTI----------PKVAKDNKIFPTEIITTNPKITALINFSEYNFKQSGNKY- 175

Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212
                +     +NI  ++   L+                     +    ++     TA N
Sbjct: 176 -----IFELEKDNIKIKKIFILNPDETISYKLEY------SGLNNLGLAVVNGITPTAEN 224

Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
           +     G +     K+  E    + +  +         W G  +KY+  +       +  
Sbjct: 225 SSRGHRGSV----IKTDKELIKINSDIKTTQIVRGHIIWAGEENKYFLQIIANKTGFTST 280

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP---- 328
                            +      L         F F G K +  +    +         
Sbjct: 281 Y------------IIPIANETTLTLSEIKGNLEGFFFGGPKLYSLLGQINEKYKKEWNID 328

Query: 329 -RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
                 ID+G+F  + KP+F+++ + YN + N+ +AI++ TV ++++ FPL  K   + 
Sbjct: 329 LALRNTIDFGFFGILGKPLFLVLHFIYNFIHNWALAIIILTVLLRIILFPLNHKSLKAM 387


>gi|213400713|gb|ACJ47005.1| hypothetical protein [Wolbachia endosymbiont of Armadillidium
           vulgare]
          Length = 171

 Score = 69.6 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 2/164 (1%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282
            +  L E  Y DI K  +     S  SW G +DKYW +  I  K    +   KY + +  
Sbjct: 8   FNNKLEEWTYKDISKKRLIKTSTSEKSWFGFADKYWFTAIITEKSDKINVSIKYTNVNNI 67

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
            ++QA F      ILPG S +T N+ FAGAK+   +  Y+  L IP F+  +D+G  YFI
Sbjct: 68  DKFQADFVRPYKHILPGASASTLNYFFAGAKKLNLLDAYKDTLNIPLFDKAVDFGVLYFI 127

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
            KP+F+L+ YF  ++ NFG+AI+L T+ +KLL  PL+ + Y+S 
Sbjct: 128 TKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYISM 171


>gi|145534225|ref|XP_001452857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420556|emb|CAK85460.1| unnamed protein product [Paramecium tetraurelia]
          Length = 358

 Score = 69.2 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 94/254 (37%), Gaps = 44/254 (17%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR--- 400
               +L+    +L    G  I+  ++ +K+ F PL     ++   MK I+P+    +   
Sbjct: 59  YSRELLLYLANDLSWGMGWGILAISMGIKIAFTPLMFSAQLNACRMKLIEPESKNFQNMI 118

Query: 401 ---EKFKQSPPQVLQKAMIQLYK-THNINPLAGCWPILLQIPVFFAIYKVISIS------ 450
               + +        +   +L+K  HNIN L     IL Q+P  F  +  +         
Sbjct: 119 QRAMRAQDFKASRAAQKQFKLFKRKHNINMLIPGLSIL-QMPFLFTWFLSLRYVCSLPDK 177

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
            E   +  + W +DL+  DP                    GI PI+ S+  F  + ++P 
Sbjct: 178 YEGLKSQGFLWFQDLSEYDPY-------------------GILPIMSSIFTFWNISLNPN 218

Query: 511 PADKGQ------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV-----IMKM 559
              +           + ++P   +  +  FPAG+ +YW  S +  ++  A+     I K+
Sbjct: 219 MQSQSTVPFAKYYRYVRFLPFFSIPVVIFFPAGVNLYWCSSALCHLIITALARQEQIRKI 278

Query: 560 HGAEIGLIDRLRST 573
            G    L   +   
Sbjct: 279 FGIPKYLPGTILER 292


>gi|309803185|ref|ZP_07697282.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LactinV 11V1-d]
 gi|308164693|gb|EFO66943.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LactinV 11V1-d]
          Length = 308

 Score = 69.2 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            G + +I       +      V N        G AI++ T  ++L+  PL          
Sbjct: 24  VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 83

Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
            +        Q  + +   K   +    L +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 84  QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 143

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S  +  + F G                   +    P  +   +  I+    
Sbjct: 144 IGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 181

Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             IQ  +S     + Q   +       P++ +     +   L +Y+    ++ ++QQ + 
Sbjct: 182 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 240

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +      +   +    +K+   +
Sbjct: 241 TFILM--PKVRADVDKELTKHPIKE 263


>gi|257413827|ref|ZP_04744347.2| sporulation associated-membrane protein [Roseburia intestinalis
           L1-82]
 gi|257202162|gb|EEV00447.1| sporulation associated-membrane protein [Roseburia intestinalis
           L1-82]
          Length = 430

 Score = 69.2 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 12/117 (10%)

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP----------ADK 514
           L  +D                  +   + P+I  L+  + +K+ P               
Sbjct: 230 LNISDTPWQVMTTNFASHNFLFVVLALLVPVISYLTQVLNIKLMPQAAPSNGNSDNDMAA 289

Query: 515 GQAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570
            Q  ++N  MP+       + P GL IYW    V+  VQQ  + K H  +I L D +
Sbjct: 290 QQMKMMNRTMPIFSFVMCFTVPVGLGIYWIAGAVVRSVQQFFLNK-HFEKINLEDII 345



 Score = 53.1 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 62/122 (50%), Gaps = 6/122 (4%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           +        ++   ++ LMS     + N G++I++ T+ +  + FPL  KQ   +   + 
Sbjct: 11  LGPIAKVLGWVMNGIYALMSMIG--IENVGLSIIIFTIVIYAILFPLTYKQQKFSKLSQK 68

Query: 392 IQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           +QP++  +++K+     Q     +Q+    +Y+ + ++ +  C  +L+Q+P+ FA+Y+V 
Sbjct: 69  MQPELQAIQKKYNGKKDQASMMAMQEETQAVYEKYGVSMMGSCVQMLIQMPLLFALYRVF 128

Query: 448 SI 449
             
Sbjct: 129 LN 130


>gi|302331670|gb|ADL21864.1| Preprotein translocase subunit YidC [Corynebacterium
           pseudotuberculosis 1002]
          Length = 415

 Score = 69.2 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 96/269 (35%), Gaps = 50/269 (18%)

Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
                 P+  +M  ++  + N         + +++    + V+ +  P    Q  S    
Sbjct: 17  IEIFIYPVSGVMKLWHLFLANMLGVPASLAWALSLFALVITVRGIVAPFTWIQLKSGRAG 76

Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
             ++PK+  L+E++++   +      Q+   +L+K +  +  +GC P L+QIPVF  +Y+
Sbjct: 77  ILMRPKLKRLQEEYEEKTDKESILEYQQKQKELHKEYGYSVKSGCVPALIQIPVFLGLYQ 136

Query: 446 VISISL-------EMRHAPFWGWIKD--------------LAAADPTNIFTLFGILPFYL 484
           V+              HAP      D              L A +  +      +   Y 
Sbjct: 137 VLLRMARPMEGLDANNHAPIGLLSSDDVSAFLESRVSDVPLPAYNAMSAEQFARLNTTYD 196

Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPAD---------KGQAMILNWMPVVFVFALS--- 532
                V    I   +   I + +S    +           Q   L  + + F   +    
Sbjct: 197 AVHAFVTPLIIAACVFTVINLIISVVRNNYSVDHDSGLAVQLNRLLIIMIFFTPLMLISL 256

Query: 533 ----SFPAGLIIYWSWSNVISIVQQAVIM 557
                 PA + +YW  +N+ +++Q A++ 
Sbjct: 257 GLRSPIPAAICMYWVANNLWTLIQNALMY 285


>gi|189210082|ref|XP_001941373.1| mitochondrial export translocase Oxa1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187977466|gb|EDU44092.1| mitochondrial export translocase Oxa1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 585

 Score = 69.2 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 79/233 (33%), Gaps = 35/233 (15%)

Query: 332 MLIDWGWFYFIAKPMFMLMS-YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
             +   + Y +   M   +   + +    +  +IM   V V+ + F L        A M 
Sbjct: 195 KEMGLDYGYGMTTLMQQGLEAIYISSGWGWAGSIMAAAVAVRCVTFALQAMTSDKAAVMA 254

Query: 391 NIQPKIDELREKFKQSPPQVLQKA--MIQLYKTHNINPLAGCWP-----ILLQIPVFFAI 443
           ++ P    L++K + +  +  ++A  M ++ +   I P  G        ++ Q  +  + 
Sbjct: 255 SLGPITKPLQDKMEDAIARGDKQAADMYRMQQQEAIRPFIGGMASMGGFMIAQGWIGISA 314

Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           ++++    E+         + W  DL   DP                       P+  + 
Sbjct: 315 FRLMRAMAELPIPGMTTDGFLWFSDLTTRDPYFF-------------------LPVATTA 355

Query: 500 SMFIQMKMSP----PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
            M+   K+        A K Q  ++  M        +   A + IY+  S ++
Sbjct: 356 MMYTVFKLGGETGLQTASKSQKTMMTVMAFFLGAVTAFQAAAIQIYFFTSALL 408


>gi|291556189|emb|CBL33306.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
           [Eubacterium siraeum V10Sc8a]
          Length = 441

 Score = 69.2 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 16/159 (10%)

Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
             +  Q P  F    ++S +++ R A        L+                     + +
Sbjct: 234 LQVYEQYPDTFKESNILSDNVKDRLAA-------LSHNMMFCGLNFGSTPKLAFEPLIII 286

Query: 491 GIWPIIMSL-----SMFIQMKMSPPPADKG---QAMILNWMPVVFVFALSSFPAGLIIYW 542
            I+  ++SL     S ++  K +P  A+ G     ++L  MP+  ++   S PAG+  YW
Sbjct: 287 PIFAFVLSLVQTVLSQYLNKKNNPEMANAGGAGMKVMLYIMPLFSLWISFSVPAGVGFYW 346

Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +  + IVQ  V+ K++  E  L         +    +
Sbjct: 347 GVNYALGIVQSLVMQKLYSPE-KLRAEAEEKMKERKLKE 384



 Score = 51.1 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           M   Y L+ NFG AI++ TV VK+   PL  KQ  + A  +   PK+ E+++K++ +  +
Sbjct: 1   MWPIYLLLQNFGWAILIFTVIVKIAMLPLQIKQQKNMAFSQLFAPKVKEIQQKYRNNRDK 60

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
             Q   +Q  +    NP  GC P++L + + F +  V+ 
Sbjct: 61  --QAEEMQKLQAQGYNPAGGCGPLVLTMVILFGVIDVVY 97


>gi|12045323|ref|NP_073134.1| putative inner membrane protein translocase component YidC
           [Mycoplasma genitalium G37]
 gi|255660033|ref|ZP_05405442.1| putative inner membrane protein translocase component YidC
           [Mycoplasma genitalium G37]
 gi|1723167|sp|P47702|OXAA_MYCGE RecName: Full=Membrane protein oxaA
 gi|3845059|gb|AAC72484.1| membrane protein, putative [Mycoplasma genitalium G37]
 gi|166078750|gb|ABY79368.1| membrane protein, putative [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 385

 Score = 69.2 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 93/256 (36%), Gaps = 33/256 (12%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
                   I     + +     L  N  +++++  + V+L+   +     ++   M  +Q
Sbjct: 124 PAAQIVLPIMYATRVPLGSGVELGFNMILSLIVLLLLVRLITIVITLNSTLALEKMNEVQ 183

Query: 394 PKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
            K+ E+  K+K        +  Q  ++ LYK HNI   A    + + +P+F  IY+ I  
Sbjct: 184 GKLAEINAKYKGAIDLQSKRNRQLEIMSLYKKHNIKSSAAFVQVFVTLPIFLIIYR-IVT 242

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507
           +L    A       DL+    T IF+ F    +    F+ + + P+      F+  K+  
Sbjct: 243 TLRPIKAIILFNFWDLSKVPLTEIFSNFTTTGWPFIIFLVI-VLPV-----QFLSQKLPQ 296

Query: 508 ------SPPPADKGQA---------MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
                 +       Q           +      VF    +   AG+ +YW  + + +++Q
Sbjct: 297 VWASKRNENAKAHSQKSIEQLNKTKKMQLIFYFVFAAITAFSAAGVGVYWFLNALFTLLQ 356

Query: 553 QA-----VIMKMHGAE 563
                  ++ +    +
Sbjct: 357 SYLTHVFIVKRREKRK 372


>gi|312874173|ref|ZP_07734207.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LEAF 2052A-d]
 gi|311090243|gb|EFQ48653.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LEAF 2052A-d]
          Length = 319

 Score = 69.2 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            G + +I       +      V N        G AI++ T  ++L+  PL          
Sbjct: 35  VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94

Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
            +        Q  + +   K   +    L +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 95  QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S  +  + F G                   +    P  +   +  I+    
Sbjct: 155 MGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192

Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             IQ  +S     + Q   +       P++ +     +   L +Y+    ++ ++QQ + 
Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +      +   +    +K+   +
Sbjct: 252 TFILM--PKVRADVDKELAKHPIKE 274


>gi|259500535|ref|ZP_05743437.1| membrane protein OxaA [Lactobacillus iners DSM 13335]
 gi|302191225|ref|ZP_07267479.1| preprotein translocase subunit YidC [Lactobacillus iners AB-1]
 gi|309810155|ref|ZP_07704000.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           SPIN 2503V10-D]
 gi|259167919|gb|EEW52414.1| membrane protein OxaA [Lactobacillus iners DSM 13335]
 gi|308169427|gb|EFO71475.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           SPIN 2503V10-D]
          Length = 319

 Score = 69.2 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            G + +I       +      V N        G AI++ T  ++L+  PL          
Sbjct: 35  VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94

Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
            +        Q  + +   K   +    L +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 95  QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S  +  + F G                   +    P  +   +  I+    
Sbjct: 155 IGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192

Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             IQ  +S     + Q   +       P++ +     +   L +Y+    ++ ++QQ + 
Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +      +   +    +K+   +
Sbjct: 252 TFILM--PKVRADVDKELTKHPIKE 274


>gi|19075829|ref|NP_588329.1| mitochondrial inner membrane protein Cox18 [Schizosaccharomyces
           pombe 972h-]
 gi|38372431|sp|O94587|COX18_SCHPO RecName: Full=Mitochondrial inner membrane protein cox18; AltName:
           Full=Sp3; AltName: Full=cox18sp+; Flags: Precursor
 gi|3790260|emb|CAA21449.1| mitochondrial inner membrane protein Cox18 [Schizosaccharomyces
           pombe]
          Length = 202

 Score = 69.2 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 74/201 (36%), Gaps = 29/201 (14%)

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
           +       +  P+A     +      +QP I E +++ + +     +    +LYK  N +
Sbjct: 21  MAIFLRSTITLPIAIASLKTARRFVQVQPLIKEAKKRCRTNTD--FRTVRKKLYKRFNCH 78

Query: 426 PLAGCWPILLQIPVF----FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481
           PL      + Q+P+F    + + + + +  E        W  DL   DP           
Sbjct: 79  PLMIYALPITQLPLFAFASYQLRQAVDVCPESMSTEGMLWFTDLTLPDP----------- 127

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN---WMPVVFV-FALSSFPAG 537
                    G+ P +++++    M +   P+D     I N    M   FV F        
Sbjct: 128 --------HGVLPAVLAVTYLTNMSILKRPSDSRLLKIFNTAGIMSAFFVSFMAFKTSTA 179

Query: 538 LIIYWSWSNVISIVQQAVIMK 558
           L +YW+ S + S+VQ   + K
Sbjct: 180 LSLYWTTSAIYSLVQNVALRK 200


>gi|328948290|ref|YP_004365627.1| membrane protein insertase, YidC/Oxa1 family [Treponema
           succinifaciens DSM 2489]
 gi|328448614|gb|AEB14330.1| membrane protein insertase, YidC/Oxa1 family [Treponema
           succinifaciens DSM 2489]
          Length = 894

 Score = 69.2 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 87/211 (41%), Gaps = 16/211 (7%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-PPQVLQKAMI 416
            N G+A++  ++ V L   PL           + IQ  +    ++ K+          + 
Sbjct: 29  NNHGLAVIGLSIVVTLCTLPLYMVAEQWQEKEREIQENLKPGTKRIKKFFKGDEQYMILT 88

Query: 417 QLYKTHNINPLAGC---WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
             YK ++ +PL      + +L+QIP F A Y  +S    ++    + +IKD    D T  
Sbjct: 89  TFYKQNHYHPLMALRSSFSLLIQIPFFIAAYTFLSHLEALKGVS-FLFIKDFGNPDATFK 147

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533
              F           ++ + PI M+L   I   +        + + +     VF+  L +
Sbjct: 148 IGSF-----------YINVLPIAMTLINCISGALYSKGHGINEKIQIFGCAAVFLLLLYN 196

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            PAGL++YW+ +N+ S+V+       +  ++
Sbjct: 197 SPAGLVVYWTMNNIFSLVKNIFYKLKNPKKV 227


>gi|322698078|gb|EFY89851.1| OXA1-like protein [Metarhizium acridum CQMa 102]
          Length = 603

 Score = 68.9 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 84/292 (28%), Gaps = 40/292 (13%)

Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325
           SK  +  +  + +       +    +         S    + +         ++  E+  
Sbjct: 187 SKPETTTTTSEAVRPVDPTPENDVPSPPTEPAVPASEVDLSSISDIVNGQDILNMSEQ-- 244

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYV 384
               +   +   +       M   + + +      +G +IM T V ++ + F    +   
Sbjct: 245 --IGYLKALGLDFGTGPTSVMQWALEHVHIYSGLGWGASIMATAVLLRCIMFYPQIRSLK 302

Query: 385 STANMKNIQPKIDELREK--------FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436
             A M+N++                  + +  +   + + ++ K        G      Q
Sbjct: 303 FNAVMQNLRKDPRSQEAMKLVQQGFANQDNEMRQKGQYLNKMLKEQYGVNNWGMLWSFGQ 362

Query: 437 IPVFFAIYK----VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           IP  F +++    + ++ +       + W  DL A DP  I    G         + VG 
Sbjct: 363 IPFTFGLFRIVSGMANVPVPAMETAGYLWFTDLTATDPYFILPAAG-------TALMVGA 415

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS----SFPAGLII 540
             I            +     + Q  +L  M  VF            A + +
Sbjct: 416 LAI------------NAKHTPESQKKMLKTMTYVFGVVGFIGTTFLSAAVNL 455


>gi|326328925|ref|ZP_08195256.1| membrane protein insertase, YidC/Oxa1 family [Nocardioidaceae
           bacterium Broad-1]
 gi|325953268|gb|EGD45277.1| membrane protein insertase, YidC/Oxa1 family [Nocardioidaceae
           bacterium Broad-1]
          Length = 270

 Score = 68.9 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 79/236 (33%), Gaps = 22/236 (9%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           + +A     +            + ++L  + ++ +    A  +          + +    
Sbjct: 20  HVLASVGPNVSWLLAIAAVVVLVRLVLLPLAIRGVRHAHASARARPQLQALTKKYQKKSA 79

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
           +    Q+    + +   ++ + H + P         Q+P+F A+Y ++  S   R  P  
Sbjct: 80  KGSASQADMMAMMEERRKINEEHGV-PRFAMLAAFAQLPIFLALYHLL--SDVSRSNP-V 135

Query: 460 GWIKDLAAADPTNIFTLFGI-------LPFYLPGFMHVGIWPIIMSLSMFIQMKM----S 508
           G + D +  D     T  G        L       +         +   ++  ++    +
Sbjct: 136 GAMND-SLVDSLGAATFLGTPLTGHGYLSGDTTHLVITLGLAATAAAVSYLSQRLWVLPN 194

Query: 509 PPPAD-KGQA-MILNWMPVV----FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
               D       I   MPV+     + A S+ P  L++YW  S + +  Q AVI +
Sbjct: 195 MVRTDVPESMLRIQELMPVISAGGMLLAGSTVPLALLVYWVVSGLWTAGQAAVIHR 250


>gi|291520343|emb|CBK75564.1| Preprotein translocase subunit YidC [Butyrivibrio fibrisolvens
           16/4]
          Length = 308

 Score = 68.9 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 55/138 (39%), Gaps = 8/138 (5%)

Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           F  +  +I+ +        + ++ +++      I + +          +   + P++  L
Sbjct: 93  FSGLTDLINNTHAALDKVNYLFVLNISETPVNLIKSAWTSDSKNFGIIICALLIPVVSYL 152

Query: 500 SMFIQMKMSPPPAD------KGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           S  + +K++P   +        Q   +   MP++ +F   + P GL IYW    ++  +Q
Sbjct: 153 SQMLNIKLTPTSTEGQSEQMAQQMKTMNLMMPLMSLFIAFTVPVGLGIYWIAGAIVRSIQ 212

Query: 553 QAVIMKMHGAEIGLIDRL 570
              + K H  +I L   +
Sbjct: 213 MVFLNK-HFEKIDLESII 229


>gi|332372488|gb|AEE61386.1| unknown [Dendroctonus ponderosae]
          Length = 332

 Score = 68.9 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 82/206 (39%), Gaps = 22/206 (10%)

Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMI-QLYKTHNINPLAGCWPILLQIPVFFAI 443
              +  N+  K+ +  E+  ++  +   K    +L    N +P      +  QIP++ ++
Sbjct: 121 ELRHETNVAVKLFKWDERTAKAAFKATMKQQWNRLVVRDNCHPFKTTVLLWFQIPLWVSL 180

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTL--FGILPFYLPGFMHVGIWPIIMSLSM 501
                 S+  R+  +   + DLAA    +   +  FG +P  L       I+P+ + ++ 
Sbjct: 181 ------SVSWRNLTYMLPVPDLAAQITYSELAVGGFGFIP-NLTVPDASWIFPVALGVAN 233

Query: 502 FIQMKM-----SPPPADKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
              +++     +  P  + Q     +   + VV V   +S P+ L +YW+ S+   +VQ 
Sbjct: 234 LAIIELQLLSRTSGPRSRTQTVITNVFRVLSVVMVPIAASVPSCLALYWTTSSAYGLVQN 293

Query: 554 AVIM----KMHGAEIGLIDRLRSTFS 575
            V++    K           ++  + 
Sbjct: 294 LVLLSPRAKRLFKVPETSVEVKEPYK 319


>gi|198432211|ref|XP_002129737.1| PREDICTED: similar to GG13956 [Ciona intestinalis]
          Length = 425

 Score = 68.9 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 59/222 (26%), Gaps = 21/222 (9%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           + +    +  ++ +    +G   I  +        L    A  +  S     +       
Sbjct: 139 WDWPHHWIQSMLEFLNVQLGVPWIPAIAIATLTLRLLALPAYIRMRSFIARSHNSQPEQM 198

Query: 399 L-----REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
                 +    +   Q      +   +  NINP+      L     F + +  +    + 
Sbjct: 199 RLQAAAKSATSKLEQQRKMLEYMDFLREKNINPVKALLYQLPIGITFLSFFSAMRGMTQA 258

Query: 454 RHAPFW----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
           +          W  DL   DP  +         YL                     ++ P
Sbjct: 259 KVPSLMEGGALWFTDLTIVDPYFLLPTLSCTSLYLLFRFGGAA------------TEVGP 306

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
                    ++ + P V +  L   P+ + I+W  SN  S  
Sbjct: 307 MAEVPFMRKVILYSPFVMLPFLVYQPSIMFIFWITSNTFSFF 348


>gi|87304138|ref|ZP_01086681.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. WH 5701]
 gi|87281451|gb|EAQ73515.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. WH 5701]
          Length = 366

 Score = 68.9 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517
           I  LAA          G + FY  G ++  I  ++    L++F+   +S    PA+  QA
Sbjct: 222 IPGLAARSGFLFIKALGQVGFYADGAINWDIAILVGGFGLTLFLSQLLSGMGMPANPQQA 281

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 PV+       FP  AG+++Y   +N+   +Q  ++ K
Sbjct: 282 TANKITPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFILTK 324



 Score = 50.0 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 4/102 (3%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPP 408
           +FY LV ++G+AI+  T+ +++  +PL+     S   M+  QP + + +        S P
Sbjct: 2   FFYGLVPSYGLAIVALTLVIRVALYPLSAGSIRSARRMRIAQPVMQKRQADIKARYASNP 61

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           Q  Q+ + ++ K    +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 62  QKQQEELGKVMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 102


>gi|118090244|ref|XP_420604.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 364

 Score = 68.9 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 63/176 (35%), Gaps = 23/176 (13%)

Query: 385 STANMKNIQPKIDELREKFKQSP-PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
                 +++ K     EK  +    + L++ + +LY   N +P      + +QIP++  +
Sbjct: 112 QLRYEVSVRGKQMGWSEKVARFHFKKKLRRIITELYIRDNCHPFKATLLVWVQIPMWVCV 171

Query: 444 YKVISI---------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
              +             E        W  DL A D T I              + +G+  
Sbjct: 172 SLALRNCSVGALDSEVQEQFSTGGTLWFTDLTAPDSTWIMP------------VSLGLLN 219

Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           ++  + +F   K+      K        + VV +   ++ P+ + +YW  S+ + +
Sbjct: 220 LL-IVEIFASQKLEASRFQKLATNFFRVLSVVMIPIAATVPSSMALYWLSSSFMGL 274


>gi|88807549|ref|ZP_01123061.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. WH 7805]
 gi|88788763|gb|EAR19918.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. WH 7805]
          Length = 382

 Score = 68.5 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 7/125 (5%)

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKG 515
           G I  LAA          G + FY  G ++  + I      LS+FI   +S    PA+  
Sbjct: 234 GKIPGLAARSGFLFIKALGQVGFYTEGAINWDIAILVGAFGLSLFISQLLSGMGMPANPQ 293

Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           QA      PV+       FP  AG+++Y   +N+   +Q  ++ +       L   L   
Sbjct: 294 QATANKITPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFLLTR-ETLPDNLQAILDDQ 352

Query: 574 FSKNY 578
             +  
Sbjct: 353 MKQAQ 357



 Score = 53.1 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  TV ++L  FPL+     S   M+  QP + + + + 
Sbjct: 8   NLLLPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67

Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           K      PQ  Q+ + +L K    +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 68  KARFASNPQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116


>gi|225619520|ref|YP_002720777.1| 60 kDa inner membrane protein [Brachyspira hyodysenteriae WA1]
 gi|225214339|gb|ACN83073.1| 60 kDa inner membrane protein [Brachyspira hyodysenteriae WA1]
          Length = 997

 Score = 68.5 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 93/236 (39%), Gaps = 26/236 (11%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVS 385
           F++  +   +        +   +      ++G+++ L ++ +  L  PL       Q   
Sbjct: 4   FDIFYNIIIYPIEFIIEILFYLFSVEFKSSYGVSLFLLSLCINFLSLPLYNIAESWQAKE 63

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
            A    ++P ID ++  +K     +L +   ++     I    G   +L+QIP F A Y 
Sbjct: 64  RAIQDKMKPMIDNIKAVYKGDQRYLLIRTCQRINGYKTIYAFRGTLGLLIQIPFFMAAYN 123

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-- 503
            +     +     + +IKDL+  D                G + + + P +M+L   +  
Sbjct: 124 FVHSLTGLSGQS-FLFIKDLSKPDALIH-----------IGNISINLLPFLMTLFSLLAG 171

Query: 504 ---QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
                K+    +       L  + ++F+  L + P+GL+ YW+ + + S ++  +I
Sbjct: 172 FVYSRKLKFKESLP-----LYIVSLIFLLLLYNSPSGLLFYWTINCLFSFIKNIII 222


>gi|325912572|ref|ZP_08174955.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           UPII 60-B]
 gi|325477993|gb|EGC81122.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           UPII 60-B]
          Length = 319

 Score = 68.5 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            G + +I       +      V N        G AI++ T  ++L+  PL          
Sbjct: 35  VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94

Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440
            +        Q  + +   K   +    L +  +++YK +N++ +   GC P+L+Q+P+ 
Sbjct: 95  QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             IY+ ++ S  +  + F G                   +    P  +   +  I+    
Sbjct: 155 MGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192

Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             IQ  +S     + Q   +       P++ +     +   L +Y+    ++ ++QQ + 
Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251

Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +      +   +    +K+   +
Sbjct: 252 TFILM--PKVRADVDKELTKHPIKE 274


>gi|257784091|ref|YP_003179308.1| 60 kDa inner membrane insertion protein [Atopobium parvulum DSM
           20469]
 gi|257472598|gb|ACV50717.1| 60 kDa inner membrane insertion protein [Atopobium parvulum DSM
           20469]
          Length = 679

 Score = 68.5 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 88/224 (39%), Gaps = 26/224 (11%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              +A    +++   Y+L G++  AI L T   K++  PLA     ++  M  + P+   
Sbjct: 1   MEQLAHVFSLIVQPAYDLTGSWWAAIFLFTFATKIILMPLALWTQQNSIVMVRLMPETFR 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           L+ ++       +++   +L K    +PL    P+ +Q+ + F +  VI           
Sbjct: 61  LKTRYFGDKET-IEERSNELNKKAGYHPLLSLIPLAIQVVILFGLVDVIHG--------- 110

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPP--A 512
              I D  A     +    G+ P    G     I P+  +LS         K++P     
Sbjct: 111 ---ITDSGAPGTEFL----GMTPIIDGGI--TWIMPLAAALSSVALGLASNKLNPLQREQ 161

Query: 513 DKGQAMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
            + +    N + + + +        G+  YW  SN++SI+ Q V
Sbjct: 162 SRAEKNTTNGLSIAMSLVLAVYVVCGMAFYWVCSNLLSILVQIV 205


>gi|325473999|gb|EGC77187.1| inner membrane protein [Treponema denticola F0402]
          Length = 521

 Score = 68.5 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 104/242 (42%), Gaps = 19/242 (7%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK-KQYVSTAN 388
             M+  +  + F+    F+  +   + +G   + + +    + L  + +A+  Q      
Sbjct: 5   LYMIFIYPVYMFVEFVFFLANNITDDYIGASIVLLSIIVNIICLPIYNVAETWQKKERDI 64

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
            K ++PK  ++R  F      ++  A  +    H +  L G +P+L+QIP FFA YK++S
Sbjct: 65  QKKLKPKTKDIRAVFSGDERYMILSAYYRQNNYHPLYALRGIFPLLIQIPFFFAAYKLLS 124

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
               + +A  + ++KDL   D                G +++   PI+M++       + 
Sbjct: 125 NLPLLNNAS-FWFLKDLGKPDQ-----------LLNIGGIYINFLPILMTIINISASAVY 172

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
                  + + L     VF+  L + P+GL++YW+ +N+ S++      K     + L  
Sbjct: 173 SKGLSLKEKIQLYLTAAVFLILLYNSPSGLVLYWTLNNLFSLL------KNIFYRVRLDK 226

Query: 569 RL 570
           R+
Sbjct: 227 RI 228


>gi|71894609|ref|YP_278717.1| putative inner membrane protein translocase component YidC
           [Mycoplasma synoviae 53]
          Length = 629

 Score = 68.5 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 110/329 (33%), Gaps = 55/329 (16%)

Query: 277 YLSDGHARYQAKFSANEITILPGK-SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
           Y  +    +   FS+++  ++         + +     +   +      +  P  +    
Sbjct: 314 YKKETVENFAIDFSSSKNFLVDDALKYNADSNILDTRTDEKELLGSGGTVQNPVTDWGQS 373

Query: 336 WGWFYFIAKPMFMLMSYFYNLV--------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           W +  F    ++   +    +          +  IAI++  +  +L    +  K  +  +
Sbjct: 374 WQYGPFYGLIVYPFSALINAITNSLPSLDGWSSIIAILVLVLLTRLFSLFITFKATIVQS 433

Query: 388 NMKNIQPKIDELREKFKQSPP-----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
             ++++ K   +  K+K            QK +  LYK +NIN L G  P L+ +P+FFA
Sbjct: 434 AQEDLRVKKAAIENKYKGFENNKQMKMRKQKEIADLYKKNNINVLDGFLPQLVAMPIFFA 493

Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-YLPGFMHVGIWPIIMSLSM 501
           +++ I                  +    T +   FG   +  +     + +W II+ + +
Sbjct: 494 MWRAIQAVP--------------SIKATTWLGINFGATSWREVIAGNFIYLWIIIVVVII 539

Query: 502 FIQMKMSP-----------PPADKGQA-----MILNWMPVVFVFALSSFPAGLIIYWSWS 545
               ++ P               + QA            +VF F    F AG+ +YW ++
Sbjct: 540 QFTSQLIPHWLNKKRLKERTTVAEVQALKKSERYQTIFIIVFTFMAIIFTAGVQVYWLFT 599

Query: 546 NVISIVQ----------QAVIMKMHGAEI 564
            +    Q          Q    K    + 
Sbjct: 600 GIWQTFQVIGLHKLRKTQWFKNKYSRKKP 628


>gi|328854069|gb|EGG03204.1| hypothetical protein MELLADRAFT_117386 [Melampsora larici-populina
           98AG31]
          Length = 496

 Score = 68.5 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 68/210 (32%), Gaps = 32/210 (15%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV---L 411
                  I I+     +  +     +    +      I  +I  ++E   +   Q     
Sbjct: 206 PWFLTIPIVILSLRTVLIPINIWSMQIGVRNMRVKPKIDEQIQVIKELQTKGEQQKAFMK 265

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-------GWIKD 464
           Q  +  L K     PLA     L+Q  +F + +  +    EM +   +        W  D
Sbjct: 266 QNELRALMKAEGFRPLAPLGLPLVQGSLFVSFFWALR---EMGNHHLFSLTQEGALWFTD 322

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L               P+Y    +  G+   ++S+    +M        +    ++ ++ 
Sbjct: 323 LTV-----------GGPWYGLPLIASGLT--LLSVETAAEMGGMKAGQSE---KVMWFLR 366

Query: 525 VVFV---FALSSFPAGLIIYWSWSNVISIV 551
            V +   +     P+ + +YW  +N  S++
Sbjct: 367 AVILGTLWLFYDLPSAVFLYWCTNNFFSLL 396


>gi|255028799|ref|ZP_05300750.1| SpoIIIJ protein [Listeria monocytogenes LO28]
          Length = 90

 Score = 68.5 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 27/57 (47%)

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
               +K  AMI+  MPV+ +F   + P+ L +YW   N+ ++ Q  +I      +  
Sbjct: 2   QTQQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 58


>gi|144575191|gb|AAZ44006.2| conserved hypothetical protein [Mycoplasma synoviae 53]
          Length = 652

 Score = 68.5 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 110/329 (33%), Gaps = 55/329 (16%)

Query: 277 YLSDGHARYQAKFSANEITILPGK-SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335
           Y  +    +   FS+++  ++         + +     +   +      +  P  +    
Sbjct: 337 YKKETVENFAIDFSSSKNFLVDDALKYNADSNILDTRTDEKELLGSGGTVQNPVTDWGQS 396

Query: 336 WGWFYFIAKPMFMLMSYFYNLV--------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           W +  F    ++   +    +          +  IAI++  +  +L    +  K  +  +
Sbjct: 397 WQYGPFYGLIVYPFSALINAITNSLPSLDGWSSIIAILVLVLLTRLFSLFITFKATIVQS 456

Query: 388 NMKNIQPKIDELREKFKQSPP-----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
             ++++ K   +  K+K            QK +  LYK +NIN L G  P L+ +P+FFA
Sbjct: 457 AQEDLRVKKAAIENKYKGFENNKQMKMRKQKEIADLYKKNNINVLDGFLPQLVAMPIFFA 516

Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-YLPGFMHVGIWPIIMSLSM 501
           +++ I                  +    T +   FG   +  +     + +W II+ + +
Sbjct: 517 MWRAIQAVP--------------SIKATTWLGINFGATSWREVIAGNFIYLWIIIVVVII 562

Query: 502 FIQMKMSP-----------PPADKGQA-----MILNWMPVVFVFALSSFPAGLIIYWSWS 545
               ++ P               + QA            +VF F    F AG+ +YW ++
Sbjct: 563 QFTSQLIPHWLNKKRLKERTTVAEVQALKKSERYQTIFIIVFTFMAIIFTAGVQVYWLFT 622

Query: 546 NVISIVQ----------QAVIMKMHGAEI 564
            +    Q          Q    K    + 
Sbjct: 623 GIWQTFQVIGLHKLRKTQWFKNKYSRKKP 651


>gi|33240751|ref|NP_875693.1| putative inner membrane protein translocase component YidC
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
 gi|38502917|sp|Q7VB00|OXAA_PROMA RecName: Full=Inner membrane protein oxaA
 gi|33238279|gb|AAQ00346.1| Preprotein translocase subunit YidC [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 382

 Score = 68.5 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 7/128 (5%)

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKG 515
           G I  LAA          G + FY+ G ++  + I      L++ I   +S    P +  
Sbjct: 234 GKIPGLAAKSGFLFIKALGQVGFYVDGAINWDIAILVAGFGLTLVISQVLSGQGMPPNPQ 293

Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           QA      P++       FP  AG+++Y   +N+    Q  ++ K       L   L   
Sbjct: 294 QATAQKITPIMITGMFLFFPLPAGVLLYMVIANMFQAFQTFLLNK-EALPENLQKILDDQ 352

Query: 574 FSKNYNSQ 581
                  +
Sbjct: 353 IKNQGKKE 360



 Score = 50.8 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY L  ++GIAI+  T+ +++  FPL+     S   MK  QP + + + + 
Sbjct: 8   NLLIPILDFFYGLFHSYGIAIVALTIVIRIALFPLSAGSIRSARRMKIAQPVMQKRQAEI 67

Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           K    + P+  Q  + +L      +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 68  KSRYANDPKKQQDELGKLMGEFG-SPLAGCLPLLVQMPILFALFATLRGS 116


>gi|145512888|ref|XP_001442355.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409708|emb|CAK74958.1| unnamed protein product [Paramecium tetraurelia]
          Length = 363

 Score = 68.5 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 93/254 (36%), Gaps = 44/254 (17%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR--- 400
               +L+    +L    G  I+  ++ +K+ F PL     ++   MK I+P+    +   
Sbjct: 59  YSRELLLYLANDLSWGMGWGILAISMGIKIAFTPLMFSAQLNACRMKLIEPESKNFQNMI 118

Query: 401 ---EKFKQSPPQVLQKAMIQLYK-THNINPLAGCWPILLQIPVFFAIYKVISIS------ 450
               + +        +   +L+K  HNIN L     IL Q+P  F  +  +         
Sbjct: 119 QRAMRAQDFKASRAAQKQFKLFKRKHNINMLIPGLSIL-QMPFLFTWFLSLRYVCSLPDK 177

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
            E   +  + W +DL+  DP                    GI PI+ S+  F  + ++P 
Sbjct: 178 YEDLKSQGFLWFQDLSEYDPY-------------------GILPIMSSVFTFWNISLNPN 218

Query: 511 PADKGQ------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV-----IMKM 559
              +           + ++P   +  +  FPAG+ +YW  S    ++  A+     I K+
Sbjct: 219 MQSQSTVPFAKYYRYVRFLPFFSIPVVIFFPAGVNLYWCSSAFCHLIITALARQEKIRKI 278

Query: 560 HGAEIGLIDRLRST 573
            G    L   L   
Sbjct: 279 FGIPKYLPGTLLER 292


>gi|87123705|ref|ZP_01079555.1| Putative inner membrane protein; similar to 60 kDa inner membrane
           protein family protein [Synechococcus sp. RS9917]
 gi|86168274|gb|EAQ69531.1| Putative inner membrane protein; similar to 60 kDa inner membrane
           protein family protein [Synechococcus sp. RS9917]
          Length = 381

 Score = 68.5 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 6/105 (5%)

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKG 515
           G I  LAA          G + FY  G ++  + I      LS+F    +S    PA+  
Sbjct: 234 GKIPGLAARSGFLFIKALGQVGFYTDGAINWDIAILVGAFGLSLFASQLLSGMGMPANPQ 293

Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
           QA      PV+       FP  AG+++Y   +N+   +Q  ++ +
Sbjct: 294 QATANKITPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFLLTR 338



 Score = 54.6 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  TV ++L  FPL+     S   M+  QP + + + + 
Sbjct: 8   NLLIPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67

Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           K    + PQ  Q+ + +L K    +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 68  KSRFANNPQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116


>gi|317970543|ref|ZP_07971933.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. CB0205]
          Length = 378

 Score = 68.5 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517
           I  LAA          G + FY  G ++  I  ++    +++F+   +S    PA+  QA
Sbjct: 236 IPGLAARSGFLFIKALGQVGFYTDGAINWDIAILVGGFGVTLFLSQILSGMGMPANPQQA 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 PV+       FP  AG+++Y   +NV   VQ  ++ +
Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVIANVFQAVQTFLLTR 338



 Score = 53.8 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  TV ++L  FPL+     +   M+  QP + + + + 
Sbjct: 8   NLLLPILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRNARRMRIAQPVMQKRQAEI 67

Query: 404 ---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
                + PQ  Q+ +  L K    +PL+GC P+L+Q+P+ FA++  +  S
Sbjct: 68  KAKYANNPQKQQEELGSLMKEFG-SPLSGCLPLLVQMPILFALFATLRGS 116


>gi|116072768|ref|ZP_01470034.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. BL107]
 gi|116064655|gb|EAU70415.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. BL107]
          Length = 380

 Score = 68.1 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517
           I  LAA          G + FY  G ++  I  ++    L++F+   +S    PA+  QA
Sbjct: 236 IPGLAARSGFLFIKALGQVGFYADGAINWDIAILVGGFGLTLFLSQLLSGMGMPANPQQA 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 PV+       FP  AG+++Y   +N+   +Q  ++ K
Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFILTK 338



 Score = 51.9 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  T+ +++  +PL+     S   M+  QP + + +   
Sbjct: 8   NLLIPILDFFYGLVPSYGLAIVALTLVIRVALYPLSAGSIRSARRMRIAQPVMQKRQADI 67

Query: 404 ---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
                S PQ  Q+ + ++ K    +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 68  KARYASNPQKQQEELGKVMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116


>gi|78185353|ref|YP_377788.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. CC9902]
 gi|78169647|gb|ABB26744.1| putative inner membrane protein; similar to 60 kDa inner membrane
           protein family [Synechococcus sp. CC9902]
          Length = 380

 Score = 68.1 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517
           I  LAA          G + FY  G ++  I  ++    L++F+   +S    PA+  QA
Sbjct: 236 IPGLAARSGFLFIKALGQVGFYADGAVNWDIAILVGGFGLTLFLSQLLSGMGMPANPQQA 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 PV+       FP  AG+++Y   +N+   +Q  ++ K
Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFILTK 338



 Score = 52.3 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  T+ +++  +PL+     S   M+  QP + + +   
Sbjct: 8   NLLIPILDFFYGLVPSYGLAIVALTLVIRVALYPLSAGSIRSARRMRIAQPVMQKRQADI 67

Query: 404 ---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
                S PQ  Q+ + ++ K    +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 68  KARYASNPQKQQEELGKVMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116


>gi|33866422|ref|NP_897981.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. WH 8102]
 gi|38502911|sp|Q7U522|OXAA_SYNPX RecName: Full=Inner membrane protein oxaA
 gi|33633200|emb|CAE08405.1| Putative inner membrane protein; similar to 60 kDa inner membrane
           protein family [Synechococcus sp. WH 8102]
          Length = 380

 Score = 68.1 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517
           I  LAA          G + FY  G ++  I  ++    L++F+   +S    PA+  QA
Sbjct: 236 IPGLAARSGFLFIKALGQVGFYADGDINWDIAILVGGFGLTLFLSQLLSGMGMPANPQQA 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 PV+       FP  AG+++Y   +N+   +Q  ++ +
Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFLLTR 338



 Score = 52.3 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 62/110 (56%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  T+ +++  +PL+     S   M+  QP I + + + 
Sbjct: 8   NLLIPILDFFYGLVPSYGLAIVALTIVIRVALYPLSAGSIRSARRMRIAQPVIQKRQAEI 67

Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           K    +  Q  Q+ + ++ K    +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 68  KSRYANNLQKQQEELGKVMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116


>gi|76153368|gb|AAX25001.2| SJCHGC08195 protein [Schistosoma japonicum]
          Length = 172

 Score = 67.7 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 21/128 (16%)

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-AD 513
            +    W  DL A+DP  I      LPF     + +           F     +P P   
Sbjct: 1   QSGGIAWFTDLTASDPYYI------LPFLSMSTLLLV----------FETGAETPSPHIQ 44

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM----KMHGAEIGLIDR 569
                ++   P++    + + P+ L+ YW+ SN++S +Q  ++     + +     +   
Sbjct: 45  PVVRTVMRVFPIIGFVFVVNMPSALVWYWTVSNMLSFLQSLILRYPPFRSYFNLPPVRAP 104

Query: 570 LRSTFSKN 577
           L     K 
Sbjct: 105 LSVVNKKR 112


>gi|148240237|ref|YP_001225624.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. WH 7803]
 gi|147848776|emb|CAK24327.1| Preprotein translocase subunit YidC [Synechococcus sp. WH 7803]
          Length = 383

 Score = 67.7 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 6/105 (5%)

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKG 515
           G I  LAA          G + FY  G ++  + I      LS+FI   +S    PA+  
Sbjct: 234 GKIPGLAARSGFLFIKALGQVGFYTEGSINWDIAILVGAFGLSLFISQLLSGMGMPANPQ 293

Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
           QA      PV+       FP  AG+++Y   +N+   +Q  ++ +
Sbjct: 294 QATANKITPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFLLTR 338



 Score = 53.1 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  TV ++L  FPL+     S   M+  QP + + + + 
Sbjct: 8   NLLLPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67

Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           K      PQ  Q+ + +L K    +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 68  KARFASNPQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116


>gi|78212127|ref|YP_380906.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. CC9605]
 gi|78196586|gb|ABB34351.1| putative inner membrane protein; similar to 60 kDa inner membrane
           protein family [Synechococcus sp. CC9605]
          Length = 376

 Score = 67.7 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKGQA 517
           I  LAA          G + FY  G ++  + I      +++FI   +S    PA+  QA
Sbjct: 236 IPGLAARSGFLFIKALGQVGFYADGAINWDIAILVAGFGITLFISQLLSGMGMPANPQQA 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 PV+       FP  AG+++Y   +N+   +Q  ++ K
Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMLIANIFQGLQTFILTK 338



 Score = 51.5 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  T+ +++  +PL+     S   M+  QP I + + + 
Sbjct: 8   NLLIPILDFFYGLVPSYGLAIVALTLVIRIALYPLSAGSIRSARRMRIAQPVIQKRQAEI 67

Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +    + PQ LQ+ +  + K    +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 68  RSRYANNPQKLQEELGNVMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116


>gi|156359942|ref|XP_001625022.1| predicted protein [Nematostella vectensis]
 gi|156211833|gb|EDO32922.1| predicted protein [Nematostella vectensis]
          Length = 261

 Score = 67.7 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 75/244 (30%), Gaps = 47/244 (19%)

Query: 342 IAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFF-PLAKKQYVSTANMKNIQPKIDEL 399
                  ++   +          I+  TV ++     PLA +Q    A ++ +QP +  +
Sbjct: 1   PIYATQQVLEAIHTWTHLPWWATIIGVTVVLRTCITLPLAIRQNKLVAKIELLQPTLQMM 60

Query: 400 REKFKQSP------------------PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
            E  K                      +  ++ M +LY+    NP+       +Q+P++ 
Sbjct: 61  TEALKHREAVECKRAGKTVEEFEKRFKKKQRRMMYELYQGEGCNPIKMFLLPWIQLPLWI 120

Query: 442 AIYKVISIS-------------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
            I   +                 EM       W  DL   DPT +  L   +        
Sbjct: 121 LISLSLRSMTGTSYSQRNSVLCPEMASEGA-LWFPDLLVPDPTIMIPLAVGI-------- 171

Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
                  + ++ M    +  P    +     L  + V  V   S  P  + +YW+ S   
Sbjct: 172 -----CNLTNIEMHALRRQQPSRFQRVMTNTLRLLSVFMVMFASQVPTAMSLYWAVSAGF 226

Query: 549 SIVQ 552
            + Q
Sbjct: 227 GVCQ 230


>gi|58699428|ref|ZP_00374178.1| 60 kd inner-membrane protein [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534053|gb|EAL58302.1| 60 kd inner-membrane protein [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 124

 Score = 67.7 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/130 (35%), Positives = 75/130 (57%), Gaps = 8/130 (6%)

Query: 15  VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM--SPRVE 72
           ++I+ +W+  Y        N        + +  +  N  A ++  +R++ ++     RV 
Sbjct: 1   MLIMVSWRIIYDNFFSTNQNQP------LIEHIESFNDLAPIIHQNRSEIINSTREQRVS 54

Query: 73  LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANN 132
           L N  + GSI+LKGA+FDDL L  YHL+ SS+SP V LLSP+ +K+ YFAE  ++  +N 
Sbjct: 55  LTNNMIKGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESKDVYFAEFGWLDPSNR 114

Query: 133 IELPNSNTVW 142
           I++P+S  VW
Sbjct: 115 IKVPDSKAVW 124


>gi|38503150|sp|Q98R58|OXAA_MYCPU RecName: Full=Membrane protein oxaA
          Length = 397

 Score = 67.7 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 52/274 (18%), Positives = 99/274 (36%), Gaps = 28/274 (10%)

Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF-YFIAKPMFMLMSYFYNLVGNFGIAIM 365
                A +F  ++   + +A   +  +    W  Y+   P + L+        N+  +  
Sbjct: 108 KSLNNADDFELVYSQGEKIAQSDYGQIPVVTWGEYWNYGPFYALLVAPIASFTNWVASAF 167

Query: 366 LTTVF-----------VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-----Q 409
            +               +L  F L  K   S    + +Q K  ++  K+          Q
Sbjct: 168 ESGFGIVFAIIVVVVVTRLFIFGLTFKVTFSQYKQQELQGKKAKIDAKYAAYENNKMMKQ 227

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
             QK +  LYK HNI+P+     I    P+F A+++VI     ++    +    + + A 
Sbjct: 228 RKQKEIQDLYKKHNISPIDFVASIAWSSPLFIAVWRVIQSVPVIK--SNFFLGVNFSTAS 285

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--KGQA-----MILNW 522
              I     +  + +   + V I   I  L  ++  K     A+  + Q+        N 
Sbjct: 286 YQEILAKNWVYLWVVSLALIVQIISQI--LPRWLAKKKIKERANVYEMQSYKKNNKTQNI 343

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           M +VF+    +  AG+ IYW    + +I Q   +
Sbjct: 344 MLIVFMVFTITLQAGVQIYWIIGGLWTIGQTLFV 377


>gi|255657156|ref|ZP_05402565.1| hypothetical protein CdifQCD-2_15996 [Clostridium difficile
           QCD-23m63]
 gi|296452006|ref|ZP_06893721.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile
           NAP08]
 gi|296879599|ref|ZP_06903578.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile
           NAP07]
 gi|296259197|gb|EFH06077.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile
           NAP08]
 gi|296429402|gb|EFH15270.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile
           NAP07]
          Length = 216

 Score = 67.7 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 17/214 (7%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
             FI+  +  L+S  +N  G+FGI+I+L T+ VKL+  PL+ KQ  S    + +  K++ 
Sbjct: 1   MDFISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEH 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           ++EK+K    ++ ++  IQ+    ++  + GC  +L+Q+PV +A+Y V     +      
Sbjct: 61  IKEKYKNDTKELEKQ--IQVNSVESMKSMLGCLIVLVQMPVVYALYHVCLDMTKEFTTII 118

Query: 459 WGWIKDLAAADPTNIFT-LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
             WI +L   D   I   ++ ++        ++               K++       Q 
Sbjct: 119 IPWIANLGTFDNLFILPCIYTLIMLASNLVNYIPYL------------KINSQVKFNKQM 166

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
            ++    +  +      P  + +Y+  S + S++
Sbjct: 167 AMVT--TITSLILTVRTPVAIGLYFITSAIYSLI 198


>gi|91094029|ref|XP_967706.1| PREDICTED: similar to inner membrane protein COX18, mitochondrial
           [Tribolium castaneum]
          Length = 345

 Score = 67.7 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 88/264 (33%), Gaps = 43/264 (16%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGN--------FGIAIMLTTVFVKLLFFPLAKK 381
           F+ +       F +      + Y    + N        +   I+ TTV ++         
Sbjct: 48  FDSIAKTQSGIFKSLSESAPVEYCQKFLLNVHDTTGLPWWATIICTTVMMRGCVTVPLAI 107

Query: 382 QYVSTA------------------NMKNIQPKIDELREKFKQSPPQVLQKAMIQ-LYKTH 422
                                       I  K+    EK  +   +   +   Q L +  
Sbjct: 108 YQNYIMAKLEFVKLEMDEIAQELKKETAIAVKMYNWDEKTARITFKRSIRKQWQGLIQRE 167

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL--FGIL 480
           N +P      I  QIP++ ++      S+ +R+  +    +D +A       ++  FG +
Sbjct: 168 NCHPFKTTLLIFFQIPLWISL------SVSLRNLVYMLPQQDTSAQITFTELSVGGFGWI 221

Query: 481 PFYLPGFMHVGIWPIIMSLS------MFIQMKMS-PPPADKGQAMILNWMPVVFVFALSS 533
           P  L       + PI+  L       M    K++ P    +        + +V +   S+
Sbjct: 222 P-NLTVVDSSLVLPILFGLLNLAIIEMQTLSKINVPTKLQRYLTNFFRGLSLVMIPVASA 280

Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557
            P+ +++YW+ S+    VQ  V++
Sbjct: 281 VPSCVVLYWTTSSAFGFVQNLVLI 304


>gi|167522823|ref|XP_001745749.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776098|gb|EDQ89720.1| predicted protein [Monosiga brevicollis MX1]
          Length = 384

 Score = 67.7 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 73/211 (34%), Gaps = 27/211 (12%)

Query: 368 TVFVKLLFFPLAKKQYVSTANMKN---------IQPKIDELREKFKQSPPQVLQKAMIQ- 417
           TV      +  A          +           Q    +  E    +  + L +  ++ 
Sbjct: 123 TVVGAPAAWYQAHWSSRVELQRRRLMQWADAIGHQVMRRKASENLTDAEAENLIQEQVRA 182

Query: 418 ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473
               L             P L+Q+P+F  +   +               +   A D  + 
Sbjct: 183 QQKVLMDEIGWRRWKLVLPALVQVPIFITVSLALRRL----QDSDSLLFQQYQA-DLASQ 237

Query: 474 FTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMKMSPP--PADKGQA-----MILNWMPV 525
             L+  LP+      H + + P+++ ++ +  +++S    P             L ++ +
Sbjct: 238 GPLWHSLPWTASLTEHDILLLPLVLGITNWFTLELSTIKRPVSPESREDRLGTALRYLAI 297

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             +   ++ P+GL +YW+ S+V+++ Q  ++
Sbjct: 298 AMIPVAAAVPSGLSLYWASSSVLTLTQNLML 328


>gi|312221618|emb|CBY01558.1| similar to mitochondrial export translocase Oxa1 [Leptosphaeria
           maculans]
          Length = 606

 Score = 67.3 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 85/237 (35%), Gaps = 38/237 (16%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
           + +    +F  M  +  L    G    I+L  V V+ L F    +     A M +++P  
Sbjct: 232 YGWGVTTVFERMIEYMYLTTGLGWGASIVLACVAVRSLTFYFQVRNSDKMAVMASMKPIT 291

Query: 397 DELREKFKQSPPQVLQKA--MIQLYKTHNINPLAGCWP-----ILLQIPVFFAIYKVISI 449
             L+EK + +  +   +   ++++ ++  + P  G        ++ Q  + F  ++ +  
Sbjct: 292 QPLQEKLEAAIARGDDQQANIVRMQQSQVLKPYVGSMASMGGFMVAQAWIGFCAFRCLRA 351

Query: 450 SLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
             ++     +   + W  DL   DP                     I P   S  M+   
Sbjct: 352 MGQLPVPGMNQDGFLWFADLTMRDPYF-------------------ILPATTSAIMYFVF 392

Query: 506 K------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           K      ++  P     + I++ + V      +  PAGL IY+  S +   V   ++
Sbjct: 393 KKGGETGITQSPNGAVTSKIMSGLAVFVGLITAFQPAGLQIYFLVSGIFGAVTGWLL 449


>gi|220910606|ref|YP_002485917.1| inner membrane protein translocase component YidC [Cyanothece sp.
           PCC 7425]
 gi|219867217|gb|ACL47556.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 7425]
          Length = 396

 Score = 67.3 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 62/176 (35%), Gaps = 17/176 (9%)

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470
             +  ++L +  ++  L      L       A  K      ++ H           A D 
Sbjct: 211 RGQERVKLDEKGHLVALQPGDVTLQGTVPGIASDKGFLFIDKLGHVGAIDNDLFTTAPDG 270

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVF 527
           +  F  FG +         V I  +   +S++I   +S       +  Q  +    P++F
Sbjct: 271 SKQFN-FGAIHLD------VLIMILGFGVSLYINQILSGQGSTSNNPQQNTVNQMTPIIF 323

Query: 528 VFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
                 FP  AG+++Y   +N+   +Q  +I+     +  L + +R    +   ++
Sbjct: 324 SGMFLFFPLPAGVLLYMLIANIFQTLQTFLIL-----KEPLPENIRKLAEEETKAE 374



 Score = 51.9 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 6/121 (4%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY +V ++G+AI+  T+ ++L  +PL+     +   MK +Q
Sbjct: 1   MDFGIGFLSDNVMLPILDFFYGIVPSYGLAIVALTLVIRLALYPLSAGSIRNMRQMKIVQ 60

Query: 394 PKID----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           P +     E++EK+K   P   Q+AM ++YK    NPLAGC+P+LLQ+P+ FA++  +  
Sbjct: 61  PMMQKKVKEIQEKYKN-DPTGQQQAMSEVYKEFG-NPLAGCFPLLLQMPILFALFATLRG 118

Query: 450 S 450
           S
Sbjct: 119 S 119


>gi|116073512|ref|ZP_01470774.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. RS9916]
 gi|116068817|gb|EAU74569.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. RS9916]
          Length = 380

 Score = 67.3 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 7/138 (5%)

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMK 506
            ++    A   G I  LAA          G + FY  G ++  + I      +S+F    
Sbjct: 223 TAIAPGDATVEGKIPGLAARSGFLFIKALGQVGFYSDGAINWDIAILVGAFGVSLFASQL 282

Query: 507 MSPP--PADKGQAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGA 562
           +S    PA+  QA      PV+       FP  AG+++Y   +N+    Q  ++ +    
Sbjct: 283 LSGMGMPANPQQATANKITPVMITGMFLFFPLPAGVLLYMVIANIFQAGQTFLLTR-EAL 341

Query: 563 EIGLIDRLRSTFSKNYNS 580
              L   L     +   +
Sbjct: 342 PDNLQAILNDQMKQQATA 359



 Score = 54.2 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  TV ++L  FPL+     S   M+  QP + + + + 
Sbjct: 8   NLLIPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67

Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           K    + PQ  Q+ + +L K    +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 68  KSRFANNPQKQQEELQKLMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116


>gi|124487900|gb|ABN12033.1| mitochondrial inner membrane protein OXA1L precursor
           [Maconellicoccus hirsutus]
          Length = 188

 Score = 67.3 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 51/118 (43%), Gaps = 11/118 (9%)

Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
            F A+ K+  + +E      + W  DL   D   +  L   +  +  G + VG+     +
Sbjct: 3   FFMALKKMAYVPVESMTTGGFLWCTDLTVPDQFYLLPLITSITLW--GIIEVGVDTGKAT 60

Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           ++      ++           + ++P+V    + +FPAG+  YW ++N +S+ Q A +
Sbjct: 61  VAGQFSRFVNLG---------MKFIPLVAFPFMMNFPAGVCCYWMFTNFVSLGQVAFL 109


>gi|302560470|ref|ZP_07312812.1| preprotein translocase YidC subunit [Streptomyces griseoflavus
           Tu4000]
 gi|302478088|gb|EFL41181.1| preprotein translocase YidC subunit [Streptomyces griseoflavus
           Tu4000]
          Length = 238

 Score = 67.3 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 20/220 (9%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           V     AI+L T FV+LL  PL++           +QP+I ELR +     P+ L++A++
Sbjct: 21  VSAAAAAIVLFTAFVRLLVHPLSRAAARGQKARTALQPRIAELRRRH-GRDPEKLRRAVL 79

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL-AAADPTNIFT 475
           +L+    ++PL+GC P LLQ+P FF +   +  S E+           L AA        
Sbjct: 80  ELHTREKVSPLSGCLPSLLQVPAFF-LMYHLFSSEEIGGRANALLDHQLFAAPLGGRWAD 138

Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--------------MILN 521
             G    +    +       ++++  +   ++S        A               +  
Sbjct: 139 ALGDGGVFGGAGVVYVGLFAVVAVVAWFGYRLSRRMMAAQSATAGVGGGEQVPGLGAVTK 198

Query: 522 WMPVVFVFALSS---FPAGLIIYWSWSNVISIVQQAVIMK 558
            MP +  F L S    P    +Y   S    +V++AV+ +
Sbjct: 199 VMPFMSFFTLVSVAVMPLAAALYVVTSTTWGLVERAVLYR 238


>gi|322712796|gb|EFZ04369.1| OXA1-like protein [Metarhizium anisopliae ARSEF 23]
          Length = 418

 Score = 67.3 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 69/226 (30%), Gaps = 36/226 (15%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
             +   +       M   + + +      +G +IM T V ++ + F    +     A M+
Sbjct: 91  KALGLDFGTGPTSVMQWALEHVHIYSGLGWGASIMATAVLLRCIMFYPQVRSLKFNAVMQ 150

Query: 391 NIQPKIDELREK--------FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
           N++                  + +  +   + + ++ K        G      QIP  F 
Sbjct: 151 NLRKDPRSQEAMKLVQQGFANQDNEMRQKGQYLNKMLKEQYGVNNWGMLWSFGQIPFTFG 210

Query: 443 IYK----VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           +++    + ++ +       + W  DL A DP  I    G         + VG   I   
Sbjct: 211 LFRIVSGMANVPVPAMETAGYLWFTDLTATDPYFILPAAG-------TALMVGALAI--- 260

Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS----SFPAGLII 540
                    +     + Q  +L  M  VF            AG+ +
Sbjct: 261 ---------NAKHTPESQKKMLKTMTYVFGVVGFIGTTFLSAGVNL 297


>gi|323356507|ref|YP_004222903.1| preprotein translocase subunit YidC [Microbacterium testaceum
           StLB037]
 gi|323272878|dbj|BAJ73023.1| preprotein translocase subunit YidC [Microbacterium testaceum
           StLB037]
          Length = 270

 Score = 66.9 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 83/254 (32%), Gaps = 7/254 (2%)

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364
                +       +        +  F +           + +  L      L G    A+
Sbjct: 6   EGRWRSDPSITDPLIAATNGTLMDLFTLPPLAFLLDLTTRALLALTDTLTPLTGGLAAAL 65

Query: 365 MLTTVFV--KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422
            +  V +  +L   P+   Q  +      + P++  L+E+++++P   LQ+  +QLY+  
Sbjct: 66  AVVAVTLVVRLALIPVGVSQARAEQTRARLAPRLRVLQERWRKNPE-RLQRETMQLYRDE 124

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
           N +P AGC P+L Q PV   +Y V        HA               ++         
Sbjct: 125 NTSPAAGCLPLLAQAPVVGLLYAVFLHPTVGGHANTLLTHDLFGVPLGRSLVGALTSGTM 184

Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF----ALSSFPAGL 538
                       ++++    +  ++  P  D      +  M  V  F         P   
Sbjct: 185 DATTLAVFASLVVVIAGVAELTRRLLRPATDPSAPTWMTGMVGVLQFTTAGVALFVPLAA 244

Query: 539 IIYWSWSNVISIVQ 552
            +Y + + + ++ Q
Sbjct: 245 ALYLTVTTMWTLGQ 258


>gi|18376225|emb|CAD21340.1| related to cytochrome oxidase processing protein OXA1 [Neurospora
           crassa]
          Length = 452

 Score = 66.9 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 85/298 (28%), Gaps = 52/298 (17%)

Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
           Q +Y S G     A  +A      P  S                + +  + +    F   
Sbjct: 66  QVRYASTGPDAAVAADAATAAAAAPSSSPVDAVAATPVELTGSDLLNLPEQIG---FLKT 122

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL-----LFFPLAKKQYVSTAN 388
           +   + + +   M  L  + Y   G    A +     +            +++       
Sbjct: 123 LGLDYGWGVTSMMQWLTEHVYVYSGLPWWATLAAVAAIVRVAIFKPSLGASQESQKMQDL 182

Query: 389 MKNIQPKIDELREKFKQSPPQV------LQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442
            KN +      + K               ++ M  + K   IN     +   +Q+P+ F 
Sbjct: 183 NKNPKYAAIMAKVKEASFDTTKQNDLVKYRQEMALMTKNAGINYFK-VFIPFIQVPIGFG 241

Query: 443 IYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           ++++I       +E        W  DL  ADP                       PI  +
Sbjct: 242 MFRLIRGMAALPVESLETGGTLWFPDLTVADPYF-------------------ALPIASA 282

Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFV----FALSSFPAGLIIYWSWSNVISIVQ 552
                 M+          A ++  M +V V    FA +  PA L  Y+  S +    Q
Sbjct: 283 CLFVASMR----------ARMMKSMGLVLVPVSIFATAWLPAALQWYFLVSAIGQYFQ 330


>gi|241997838|ref|XP_002433562.1| cytochrome oxidase biogenesis protein, putative [Ixodes scapularis]
 gi|215495321|gb|EEC04962.1| cytochrome oxidase biogenesis protein, putative [Ixodes scapularis]
          Length = 334

 Score = 66.9 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 93/314 (29%), Gaps = 30/314 (9%)

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                + +      TT    F+       +           F   +           +  
Sbjct: 24  VRQEPVLLRTQTQKTTKYRHFSFESWGMALSRSAPVAYAQEFLETVHMNSGLSWCTTIVT 83

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
                  +V           +           +             ++  L EK  +   
Sbjct: 84  TSLALRIVVTLPLAVYQSHIIARLANLDKEIAQIAHELRGETARAVRMYNLDEKQAKYLY 143

Query: 409 QVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467
           +   +K +  L    N +P      I  Q+P++ ++      S+ +R+  +    +D+AA
Sbjct: 144 RRSLKKQINNLIVRDNCHPFKSSLVIWFQLPLWISL------SVALRNMAYMMPYQDMAA 197

Query: 468 ADPTNIFTLFGILPF-YLPGFMHVGIWPIIMSLSMFIQMK---MSPPPADKGQAMILNW- 522
                  ++ G L F  L     + + P+++ ++  + ++   +           +L + 
Sbjct: 198 QALFLELSVGGALWFPNLTVPDPLFVMPVLLGITNLLNIEFHALQHTKQLTKVRKVLTYT 257

Query: 523 ---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI---------------MKMHGAEI 564
              M V+ +   S  P  + +YW  S+  ++ Q  ++                +      
Sbjct: 258 LRGMSVLMIPIASIMPTDVTLYWLCSSGFALGQNLLMINPKFRRACRIPRTANESQTPFR 317

Query: 565 GLIDRLRSTFSKNY 578
            L DRL+  F  N 
Sbjct: 318 DLSDRLKKRFEFNK 331


>gi|260436088|ref|ZP_05790058.1| inner membrane protein OxaA [Synechococcus sp. WH 8109]
 gi|260413962|gb|EEX07258.1| inner membrane protein OxaA [Synechococcus sp. WH 8109]
          Length = 395

 Score = 66.9 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKGQA 517
           I  LAA          G + FY  G ++  + I      +++FI   +S    PA+  QA
Sbjct: 255 IPGLAARSGFLFIKALGQVGFYADGAINWDIAILVAGFGITLFISQLLSGMGMPANPQQA 314

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 PV+       FP  AG+++Y   +N+   +Q  ++ K
Sbjct: 315 TANKITPVMITGMFLFFPLPAGVLLYMLIANIFQGLQTFILTK 357



 Score = 51.1 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 62/110 (56%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  T+ +++  +PL+     S   M+  QP I + + + 
Sbjct: 27  NLLIPILDFFYGLVPSYGLAIVALTLVIRIALYPLSAGSIRSARRMRIAQPVIQKRQAEI 86

Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           K    + PQ  Q+ +  + K    +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 87  KSRYANNPQKQQEELGNVMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 135


>gi|281201305|gb|EFA75517.1| putative oxidase assembly protein [Polysphondylium pallidum PN500]
          Length = 398

 Score = 66.9 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 97/285 (34%), Gaps = 30/285 (10%)

Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339
           +     +     + +      S+ TT    +   +   +   + +       ML   G  
Sbjct: 86  NSPYNGEIPILNSHMLSSQNSSVATTTTTGSNEVKLSELGAAQAEAITQDPSMLEITGLP 145

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
            FI   +  L         ++ + +   T+ ++    P A KQ ++   +  I+P++D+ 
Sbjct: 146 TFIEVLLHHL---HSATGWSWMVIVPAFTLLIRSALLPFAVKQRINVTRLMEIKPQLDKF 202

Query: 400 REKFKQSPPQVLQK-----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SL 451
           +EK +++            A+ +L K    +P       L  +P F +    +     + 
Sbjct: 203 KEKSQENRATGASNYDNSVAITKLLKDKKCHPALSYILPLANLPFFISAIIAMREMAATF 262

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM--SLSMFIQMKMSP 509
                    W  DL+A DP  I  +     + L   + +G  P +   ++S         
Sbjct: 263 PSMKTAGMLWFTDLSAMDPYFILPIISSASYLLVNELTLGNAPNLFLKAISWVA------ 316

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
                        M ++ +    + P+ +  YW  S++ ++ Q  
Sbjct: 317 -----------RIMALLIIPFSYTIPSIVYFYWIPSSIFTLAQIY 350


>gi|225619519|ref|YP_002720776.1| putative inner membrane protein [Brachyspira hyodysenteriae WA1]
 gi|225214338|gb|ACN83072.1| putative inner membrane protein [Brachyspira hyodysenteriae WA1]
          Length = 1001

 Score = 66.9 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 93/236 (39%), Gaps = 26/236 (11%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVS 385
           F++  +   +        +   +      ++G+++ L ++ +  L  PL       Q   
Sbjct: 4   FDIFYNIIIYPIEFIIEILFYLFSVEFKSSYGVSLFLLSLCINFLSLPLYNIAESWQAKE 63

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
            A    ++P ID ++  +K     +L +   ++     I    G   +L+QIP F A Y 
Sbjct: 64  RAIQDKMKPMIDNIKAVYKGDQRYLLIRTCQRINGYKTIYAFRGTLGLLIQIPFFMAAYN 123

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-- 503
            +     +     + +IKDL+  D                G + + + P +M+L   +  
Sbjct: 124 FVHSLSGLSGQS-FLFIKDLSKPDALIH-----------IGNISINLLPFLMTLFSLLAG 171

Query: 504 ---QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
                K+    +       L  + ++F+  L + P+GL+ YW+ + + S ++  +I
Sbjct: 172 FVYSRKLKFKESLP-----LYIVSLIFLLLLYNSPSGLLFYWTINCLFSFIKNIII 222


>gi|323463903|gb|ADX76056.1| membrane protein OxaA [Staphylococcus pseudintermedius ED99]
          Length = 288

 Score = 66.6 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 103/263 (39%), Gaps = 41/263 (15%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-- 395
           +  F+     ++     +L  N+G+AI++  + V+++  P     Y +   M+       
Sbjct: 33  FNTFVQPMDRLIHWLGDHLNNNYGLAIIIIVLVVRIVLLPFMLSNYKNMHMMREKMKIAK 92

Query: 396 ------IDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKV 446
                  ++++    Q       + M+Q+YK +N+NP+A   GC P++LQ+P+   ++ V
Sbjct: 93  PEITEAQEKVKRARTQEDKMAANQEMMQVYKKYNMNPMASMLGCLPLILQMPIIMGLFFV 152

Query: 447 ISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           +       +     + W   L   D                         II  +  FIQ
Sbjct: 153 LKYPSGGGITKYSDFLWFH-LDKPDIW---------------------ITIIAGVLYFIQ 190

Query: 505 MKMSPPPADKGQAMILNWMPVVF----VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
             +S     + Q  +   M ++     V+   S  A L +YWS S    +VQ  +   ++
Sbjct: 191 AYVSSFNMPQEQRQMGYMMMIISPIMIVWISFSSAAALGLYWSVSAAFLVVQTYIANVVY 250

Query: 561 G--AEIGLIDRLRSTFSKNYNSQ 581
           G  A+  +   ++   ++   ++
Sbjct: 251 GKKAKEEVAPLIKKFEAEKNGNK 273


>gi|28395049|ref|NP_776188.1| mitochondrial inner membrane protein COX18 precursor [Homo sapiens]
 gi|332819554|ref|XP_517237.2| PREDICTED: mitochondrial inner membrane protein COX18 isoform 2
           [Pan troglodytes]
 gi|38372495|sp|Q8N8Q8|COX18_HUMAN RecName: Full=Mitochondrial inner membrane protein COX18;
           Short=COX18Hs; AltName: Full=Cytochrome c oxidase
           assembly protein 18; Flags: Precursor
 gi|21755775|dbj|BAC04758.1| unnamed protein product [Homo sapiens]
 gi|63253776|gb|AAY35060.1| mitochondrial COX18 [Homo sapiens]
 gi|63253778|gb|AAY35061.1| mitochondrial COX18 [Homo sapiens]
 gi|75516702|gb|AAI01685.1| COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) [Homo
           sapiens]
 gi|119626058|gb|EAX05653.1| mitochondrial COX18 [Homo sapiens]
          Length = 333

 Score = 66.6 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 60/163 (36%), Gaps = 31/163 (19%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFW-------- 459
           + +++ + +LY   N +P      + +Q+P++  +   +   S    H+  +        
Sbjct: 150 KNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLSTGAAHSEGFSVQEQLAT 209

Query: 460 ---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
               W  DL A D T I                + +  + +        K+        Q
Sbjct: 210 GGILWFPDLTAPDSTWIL---------PISVGVINLLIVEICAL----QKIGMSR---FQ 253

Query: 517 AMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             I  +   M V+ +   ++ P+ +++YW  S+ + + Q  ++
Sbjct: 254 TYITYFVRAMSVLMIPIAATVPSSIVLYWLCSSFVGLSQNLLL 296


>gi|296414378|ref|XP_002836878.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295632720|emb|CAZ81069.1| unnamed protein product [Tuber melanosporum]
          Length = 304

 Score = 66.6 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 86/299 (28%), Gaps = 54/299 (18%)

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
             L A       +                           +   +    +L     +  +
Sbjct: 5   YPLLAKPLYRVLLTKPLHHRQFSSTTPNHLIPAILSTTHDLLTTLHTSTHL-PYHTLIPL 63

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR--------------EKFKQSPPQVL 411
                   +  PL           + +QP +   +              + ++    + +
Sbjct: 64  SAIFLRLTITTPLTIYSRRRALRTQRLQPILSAYQHPIARGAKSATTTPQAWELKTRKEM 123

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS--LE-----MRHAPFWG---- 460
           ++   +L+K             ++QIPV+ A    +     +E     +R +   G    
Sbjct: 124 REKRRELWKRWGCQAWKMLLAPVVQIPVWVAASMTLRGMTGIEGLPTWLRGSGEIGGEAW 183

Query: 461 -----------WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
                      W  DL  ADP         LP      +   I          +Q K+ P
Sbjct: 184 VEEALATEGALWFGDLLIADPY------LALPMGFSFLLFANIE---------LQSKLHP 228

Query: 510 PPADKGQ--AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           P   K +    +L  + +      ++ PA L +YWS S + S+VQ  ++ K+      L
Sbjct: 229 PSTRKQRVFTNVLRILSLAAFPLTANAPAALTLYWSTSAMFSLVQNIILAKVMPRGDEL 287


>gi|328725129|ref|XP_003248356.1| PREDICTED: mitochondrial inner membrane protein COX18-like
           [Acyrthosiphon pisum]
          Length = 349

 Score = 66.6 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 84/258 (32%), Gaps = 32/258 (12%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF-----PLAKKQYVST 386
             +       +A     ++S+       +   IML+ V ++L+                 
Sbjct: 62  WFMALSNSTPVAYAQQFVISFHEFTGTPWWATIMLSAVALRLVITLPLTVYQHYNNSKLE 121

Query: 387 ANMKNIQPKIDELRE---------KFKQSPPQVLQKAMIQ-----LYKTHNINPLAGCWP 432
                 QP + E+++         ++ ++  + +    ++     L    N +P      
Sbjct: 122 NLSIEFQPTVVEIQKEVVKAVKLNRWPENKAKRVYNKAVKKYWDELIVKENCHPAKSTIV 181

Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           + +Q+P++  +      S+  R+        D A      +     +    L        
Sbjct: 182 VWVQLPLWICM------SIATRNLTLMLPPSDDAVIRFYELTEGGILWFTNLTAIDPTLS 235

Query: 493 WPIIMSLSMFI-----QMKMS--PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545
            P+IM LS  +         +  P    K    I   + ++ +      P+G+ +YW+ S
Sbjct: 236 LPLIMCLSNLLIIEIQTQSRNKEPTRNQKIITNIFRGLTIIMMPLSCFLPSGVSLYWTAS 295

Query: 546 NVISIVQQAVIMKMHGAE 563
           ++  + Q   ++     +
Sbjct: 296 SIYGLSQNLFLLSPQVRK 313


>gi|305680478|ref|ZP_07403286.1| putative inner membrane protein translocase component YidC
           [Corynebacterium matruchotii ATCC 14266]
 gi|305660009|gb|EFM49508.1| putative inner membrane protein translocase component YidC
           [Corynebacterium matruchotii ATCC 14266]
          Length = 386

 Score = 66.6 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 98/270 (36%), Gaps = 50/270 (18%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
                  P+  +M  ++ L+ +         + ++I    + V+ L  P       S   
Sbjct: 1   MLGIFMYPVSGIMKLWHILLHSVLGINDSLAWVLSIFGLIIVVRGLIAPAQWYILHSGRL 60

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGCWPILLQIPVFFAIY 444
              ++P+I  L ++++                ++ K++     AGC P L+QIPVF  +Y
Sbjct: 61  TVMMRPEITALHKEYENETSYEKISERDQREREIRKSYGYRVSAGCIPPLIQIPVFLGLY 120

Query: 445 KVISISLEMRHAPFWG---WIKDLAAADPTNIFTL-FGILP------FYLPGFMHVG--- 491
           +V+      ++         I  L++AD ++     FG +P           F  +G   
Sbjct: 121 QVLLRMARPKNGLDSQVHDPIGMLSSADVSSFLHARFGSIPVSAYVSMTPQQFARLGTNY 180

Query: 492 ------IWPIIMS--LSMFIQMKMS-----PPPADKGQAMI--LNW---------MPVVF 527
                 + P++++  L  FI M ++          + Q  I  +             +V 
Sbjct: 181 EEVMRFVAPLLLATALITFINMSITVIRNYLTIDHQSQTAIVVMRMVAVATVCTPFLLVS 240

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
                  P  ++ YW  +N+ ++VQ   I 
Sbjct: 241 GGLTGPVPTAIVAYWVANNLWTLVQNVTIY 270


>gi|87303020|ref|ZP_01085824.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. WH 5701]
 gi|87282516|gb|EAQ74475.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. WH 5701]
          Length = 378

 Score = 66.6 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 6/100 (6%)

Query: 465 LAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKGQAMIL 520
           LAA          G + FY  G ++  + I       S+FI   +S    P +  Q+   
Sbjct: 239 LAARSGFLFIKALGQVGFYTDGAVNWDIAILVGAFGASLFISQILSGAGMPPNPQQSTAN 298

Query: 521 NWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
              PV+       FP  AG+++Y   +N+   +Q  ++ +
Sbjct: 299 KITPVMITGMFLFFPLPAGVLLYMVVANIFQALQTFLLSR 338



 Score = 55.4 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  TV ++L  FPL+     S   M+  QP + + + + 
Sbjct: 8   NLLLPILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67

Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           K      PQ  Q+ + +L K    +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 68  KSRYASNPQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116


>gi|167957213|ref|ZP_02544287.1| 60 kDa inner membrane insertion protein [candidate division TM7
           single-cell isolate TM7c]
          Length = 307

 Score = 66.6 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 53/236 (22%), Positives = 105/236 (44%), Gaps = 43/236 (18%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           +  FI +P+  L+   Y+L+ +FGI+I++ T+ V+LL +PL KKQ      M+ +QP++ 
Sbjct: 4   FDEFIVRPILNLLMAIYSLIPDFGISIIVFTILVRLLLWPLIKKQLHQAKAMRKMQPELA 63

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR--- 454
           +++ K     PQ+   AM++LYK HNI+       +++Q+P+  A+Y+V+ I +  R   
Sbjct: 64  KIK-KQYAKNPQMRNLAMMELYKKHNISAFGSIGVLIIQLPILIAMYRVVQIFVSSRADL 122

Query: 455 HAPFWGWIKDLAA-------ADPTNIFTLFGILPFYLPGFMHVGIWP---IIMSLSMFIQ 504
               + ++K+L          D  N     GI+          G+     ++  ++ ++Q
Sbjct: 123 GKYVYDFVKNLPVANNLVNNPDQFNQ-NFLGIIDLTQHAVSKDGVIIGLLVLAGVAAYLQ 181

Query: 505 ----MKMSPPPADK------------------------GQAMILNWMPVVFVFALS 532
                ++SP    K                            ++ +MP++      
Sbjct: 182 YLTSKQLSPQSDSKRKLRDILAEAGGGKEADQSEVNAIMTRKMMKFMPIMMFMVTI 237


>gi|300789488|ref|YP_003769779.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei
           U32]
 gi|299799002|gb|ADJ49377.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei
           U32]
          Length = 214

 Score = 66.2 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 11/209 (5%)

Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409
           + +      +  +AI++ T+ V+LL  PLA+           + P+I  LREK      +
Sbjct: 15  LIHVLTGPLSTALAIVVFTLGVRLLLHPLARSAARGERARTALLPEITALREKH-GRDRE 73

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469
            L   M +L +    +   GC P+LLQ+P F  +Y+ +  +  +   P       L A  
Sbjct: 74  RLAAEMTKLQQESGTSLFVGCLPMLLQLPFFMVMYR-LFTTATIGGEPNSL----LGA-- 126

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529
              +              +   I   +  ++ +  ++  P  AD     +L  +P   V 
Sbjct: 127 --TLLGTPLGAHGLAGSPLVFVIAAGLAVVA-WFSVRRQPAAADVPGGKLLRLLPYGTVL 183

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
           A    P    IY   +   S  ++A++ +
Sbjct: 184 ATLVVPQAAGIYLLTTTAWSAAERALLRR 212


>gi|255102348|ref|ZP_05331325.1| hypothetical protein CdifQCD-6_16136 [Clostridium difficile
           QCD-63q42]
 gi|255308247|ref|ZP_05352418.1| hypothetical protein CdifA_16766 [Clostridium difficile ATCC 43255]
          Length = 216

 Score = 66.2 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 17/214 (7%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
             FI+  +  L+S  +N  G+FGI+I+L T+ VKL+  PL+ KQ  S    + +  K++ 
Sbjct: 1   MDFISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEH 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           ++EK+K    ++ ++  IQ+    ++  + GC  +L+Q+PV +A+Y V     +      
Sbjct: 61  IKEKYKNDTKELEKQ--IQVSSVESMKSMLGCLIVLVQMPVVYALYHVCLDMTKEFTTII 118

Query: 459 WGWIKDLAAADPTNIFT-LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
             WI +L   D   I   ++ ++        ++               K++       Q 
Sbjct: 119 IPWIANLGTFDNLFILPCIYTLIMLASNLVNYIPYL------------KINSQVKFNKQM 166

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
            ++    +  +      P  + +Y+  S + S++
Sbjct: 167 AVVT--TITSLILTVRTPVAIGLYFITSAIYSLI 198


>gi|148241736|ref|YP_001226893.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. RCC307]
 gi|147850046|emb|CAK27540.1| Preprotein translocase subunit YidC [Synechococcus sp. RCC307]
          Length = 378

 Score = 66.2 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 14/134 (10%)

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS--LSMFIQMKM 507
           ++E++       I  LAA          G + F   G ++  I  ++    LS+F+   +
Sbjct: 231 TVELK-------IPGLAARSGFLFIKALGQVGFMADGVINWDIATLVAGFGLSLFLSQIL 283

Query: 508 SP--PPADKGQAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           S    PA+  QA      PV+       FP  AG+++Y   +N+   +Q  ++++     
Sbjct: 284 SGWGMPANPQQATANRITPVMITGMFLFFPLPAGVLLYMVVANIFQALQTFLLIR-EPLP 342

Query: 564 IGLIDRLRSTFSKN 577
             L   L    +  
Sbjct: 343 DNLQTILEQQLANQ 356



 Score = 54.2 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE-- 401
             +  ++ +FY LV ++G+AI+  TV ++L  FPL+     +   M+  QP + + +   
Sbjct: 8   NVLLPILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRNARRMRIAQPVMQQRQAEI 67

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           + K +     Q+  +        +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 68  RSKFANNPSKQQEEMGKLMKEFGSPLAGCLPLLVQMPILFALFATLRGS 116


>gi|113953629|ref|YP_731297.1| inner membrane protein translocase component YidC [Synechococcus
           sp. CC9311]
 gi|113880980|gb|ABI45938.1| Inner membrane protein oxaA [Synechococcus sp. CC9311]
          Length = 382

 Score = 66.2 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 6/105 (5%)

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKG 515
           G I  LAA          G + FY  G ++  + I      LS+F+   +S    PA+  
Sbjct: 234 GKITGLAARSGFLFIKALGQVGFYTEGAINWDIAILIGAFGLSLFVSQLLSGMGMPANPQ 293

Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
           Q+      PV+       FP  AG+++Y   +N+    Q  ++ +
Sbjct: 294 QSTANKITPVMITGMFLFFPLPAGVLLYMVIANIFQAFQTFLLTR 338



 Score = 53.5 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  TV ++L  FPL+     S   M+  QP + + + + 
Sbjct: 8   NLLIPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67

Query: 404 ---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
                + PQ  Q  + +L K    +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 68  KARYANDPQKQQAELGKLMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116


>gi|254568278|ref|XP_002491249.1| Mitochondrial integral inner membrane protein required for membrane
           insertion of C-terminus of Cox2p [Pichia pastoris GS115]
 gi|238031046|emb|CAY68969.1| Mitochondrial integral inner membrane protein required for membrane
           insertion of C-terminus of Cox2p [Pichia pastoris GS115]
 gi|328352232|emb|CCA38631.1| Inner membrane protein oxaA [Pichia pastoris CBS 7435]
          Length = 324

 Score = 65.8 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 69/224 (30%), Gaps = 34/224 (15%)

Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL--REKFKQSPPQVLQKAMIQLYK 420
            +      ++L     A           +  P        EK      +  +K   +L++
Sbjct: 88  LVTAMGPLLRLKLAQQASISQKLQRESIDFFPTEATKLNYEKIMILAAKESRKRQKKLFR 147

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISI-----SLEMRHAP--------FWGWIKDLAA 467
            H +         + Q+P++  +           S E  + P         + W+ DL  
Sbjct: 148 DHGVQIWKNAILPVFQVPLWVTLSWTFRNLTGWHSFEQGNKPLDSSLIHEGFFWLHDLTV 207

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK------GQAMILN 521
            DP  I           P  +       +   +  +QM+ S     K          I+N
Sbjct: 208 PDPYMIL----------PVVLGSVALINLEWNNKTLQMRSSSAQGKKVSLRPTMMDAIMN 257

Query: 522 W--MPVVF-VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
                + F +   +  P GL +YW  SN+ S+ Q  ++ K    
Sbjct: 258 LSRFSIAFLMVISTQAPVGLSLYWISSNLYSLSQNMILDKYLPI 301


>gi|225620984|ref|YP_002722242.1| inner membrane protein [Brachyspira hyodysenteriae WA1]
 gi|225215804|gb|ACN84538.1| inner membrane protein [Brachyspira hyodysenteriae WA1]
          Length = 900

 Score = 65.8 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 84/222 (37%), Gaps = 16/222 (7%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F++ I    F            +  +   +  +  +        L+    K Q       
Sbjct: 8   FDVFIFPIEFIIETLFFLFKNIFNLSYSTSIFLLSLSINFLSLPLYNIAEKWQEKERNIQ 67

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
             ++P ID ++  +K     +L +   ++     I    G   +L+QIP F A Y  I  
Sbjct: 68  NKMKPIIDNIKAVYKGDQRYLLIRTCHRINGYKIIYAFRGVLGLLIQIPFFIAAYNFIYS 127

Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509
             ++     +  IKD +  D  N+     +LPF +       I+ I+    M    K+S 
Sbjct: 128 LSDLSQGNLFF-IKDFSKPD--NLINGINLLPFTMT------IFSILAG--MVYSKKLSI 176

Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
             +       L    ++F+  L + P+GL+ YW+ + + S++
Sbjct: 177 KESMP-----LYITSLIFLIILYNSPSGLLFYWNINCLFSLI 213


>gi|254976798|ref|ZP_05273270.1| hypothetical protein CdifQC_15858 [Clostridium difficile QCD-66c26]
 gi|255094184|ref|ZP_05323662.1| hypothetical protein CdifC_16201 [Clostridium difficile CIP 107932]
 gi|255315936|ref|ZP_05357519.1| hypothetical protein CdifQCD-7_16339 [Clostridium difficile
           QCD-76w55]
 gi|255518595|ref|ZP_05386271.1| hypothetical protein CdifQCD-_15858 [Clostridium difficile
           QCD-97b34]
 gi|255651715|ref|ZP_05398617.1| hypothetical protein CdifQCD_16123 [Clostridium difficile
           QCD-37x79]
 gi|260684747|ref|YP_003216032.1| hypothetical protein CD196_3018 [Clostridium difficile CD196]
 gi|260688405|ref|YP_003219539.1| hypothetical protein CDR20291_3064 [Clostridium difficile R20291]
 gi|306521514|ref|ZP_07407861.1| hypothetical protein CdifQ_18521 [Clostridium difficile QCD-32g58]
 gi|260210910|emb|CBA66127.1| putative membrane protein [Clostridium difficile CD196]
 gi|260214422|emb|CBE06852.1| putative membrane protein [Clostridium difficile R20291]
          Length = 216

 Score = 65.8 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 17/214 (7%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
             FI+  +  L+S  +N  G+FGI+I+L T+ VKL+  PL+ KQ  S    + +  K++ 
Sbjct: 1   MDFISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEH 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           ++EK+K    ++ ++  IQ+    ++  + GC  +L+Q+PV +A+Y V     +      
Sbjct: 61  IKEKYKNDTKELEKQ--IQVSSVESMKSMLGCLIVLVQMPVVYALYHVCLDMTKEFTTII 118

Query: 459 WGWIKDLAAADPTNIFT-LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
             WI +L   D   I   ++ ++        ++               K++       Q 
Sbjct: 119 IPWIANLGTFDNLFILPCIYTLIMLASNLVNYIPYL------------KINSQVKFNKQM 166

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
            ++    +  +      P  + +Y+  S + S++
Sbjct: 167 AVVT--TITSLILTVRTPVAIGLYFITSAIYSLI 198


>gi|219517933|gb|AAI43643.1| COX18 protein [Homo sapiens]
          Length = 334

 Score = 65.8 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 59/164 (35%), Gaps = 32/164 (19%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHA----------- 456
           + +++ + +LY   N +P      + +Q+P++  +   +   S    H+           
Sbjct: 150 KNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLSTGAAHSEAGFSVQEQLA 209

Query: 457 -PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
                W  DL A D T I                + +  + +        K+        
Sbjct: 210 TGGILWFPDLTAPDSTWIL---------PISVGVINLLIVEICAL----QKIGMSR---F 253

Query: 516 QAMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           Q  I  +   M V+ +   ++ P+ +++YW  S+ + + Q  ++
Sbjct: 254 QTYITYFVRAMSVLMIPIAATVPSSIVLYWLCSSFVGLSQNLLL 297


>gi|328948334|ref|YP_004365671.1| 60 kDa inner membrane insertion protein [Treponema succinifaciens
           DSM 2489]
 gi|328448658|gb|AEB14374.1| 60 kDa inner membrane insertion protein [Treponema succinifaciens
           DSM 2489]
          Length = 905

 Score = 65.8 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 24/242 (9%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
             +       Y + + + +  ++   L+ N G +++  ++ V LL  PL           
Sbjct: 1   MGVFFFTIVIYPLTQIIELAFTFSNKLLKNTGFSLVGVSLAVSLLTLPLYAVAEHWQEIE 60

Query: 390 KNIQPKIDELREKFKQ-SPPQVLQKAMIQLYKTHNINPLAGC---WPILLQIPVFFAIYK 445
           +NIQ K+    ++ K+          +   Y+ ++ +P+      + IL+QIP F A Y 
Sbjct: 61  RNIQAKMKPQVDRIKKVFKGDEQYMILSTYYRQNHYHPIMSLRSAFGILIQIPFFTAAYT 120

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM----SLSM 501
            +S    +++   +  I DL   D       F            V I PI+M     +S 
Sbjct: 121 CLSHMPALQNHHLFF-IADLGKPDALFSIGSF-----------SVNILPILMTVINCISG 168

Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            I  K  P   DK Q  +L     +FV  L + P+GL+IYW+ +N+ S+V+       + 
Sbjct: 169 AIYTKGLPLK-DKFQVYLLAL---LFVVLLYNSPSGLVIYWTMNNIFSLVKNIFYKLKNP 224

Query: 562 AE 563
            +
Sbjct: 225 IK 226


>gi|332233164|ref|XP_003265773.1| PREDICTED: mitochondrial inner membrane protein COX18 [Nomascus
           leucogenys]
          Length = 333

 Score = 65.8 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 59/163 (36%), Gaps = 31/163 (19%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFW-------- 459
           + +++ + +LY   N +P      + +Q+P++  +   +   S    H+  +        
Sbjct: 150 KNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLSTGAAHSEGFSVQEQLAT 209

Query: 460 ---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
               W  DL   D T I                + +  + +        K+        Q
Sbjct: 210 GGILWFPDLTVPDSTWIL---------PISVGVINLLIVEICAL----QKIGMSR---FQ 253

Query: 517 AMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             I  +   M V+ +   ++ P+ +++YW  S+ + + Q  ++
Sbjct: 254 TYITYFVRAMSVLMIPIAATVPSSIVLYWLCSSFVGLSQNLLL 296


>gi|227536314|ref|ZP_03966363.1| possible inner membrane protein translocase component YidC
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227243829|gb|EEI93844.1| possible inner membrane protein translocase component YidC
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 226

 Score = 65.8 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 56/198 (28%), Gaps = 28/198 (14%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER-------------------KNIQ 41
           M+   N  + + L   I+     + + P   E+  E+                       
Sbjct: 1   MD--RNTLIGLILIFAILGG-SFYLMKPSESEIKQEQRLQDSLKRVKEGLPPVADTTKTP 57

Query: 42  TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101
                N      A +     A        + L+N  +I  I  KG +   + L+      
Sbjct: 58  AKTAVNTNQVDSAELKKPFGAAKYGEEKIITLQNEKIIAKITSKGGRVKSVELKN--EKN 115

Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161
              SP++     +N     F       + NN+    ++   ++  G     +  +K    
Sbjct: 116 FDGSPLILFDGNNNRFGLMFNAAGQNISTNNLNFQTTDADVSISKG----DSKTVKFRLS 171

Query: 162 NANNILFERTISLDEHYL 179
             +    E T +L     
Sbjct: 172 YNDAQYIEYTYTLKGDDY 189


>gi|221195498|ref|ZP_03568553.1| 60Kd inner membrane protein [Atopobium rimae ATCC 49626]
 gi|221184685|gb|EEE17077.1| 60Kd inner membrane protein [Atopobium rimae ATCC 49626]
          Length = 646

 Score = 65.8 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/225 (21%), Positives = 92/225 (40%), Gaps = 26/225 (11%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
               +AK   +++   Y+L G++  AI L T+  K++  PLA     ++  M  I P++ 
Sbjct: 1   MLEQLAKLFSLIVQPAYDLTGSWWAAIFLFTLATKIILMPLALWTQQNSIVMVKIMPEMF 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
            L+ ++     + +++   +L K    +PL    P+ +Q+ + F +  VI          
Sbjct: 61  RLKTRYFG-DRETIEERQNELNKKAGYHPLLSLIPLAIQVIILFGLVDVIHG-------- 111

Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPP-- 511
               I D  A     +    G+ P    G     I P+  +LS         K++P    
Sbjct: 112 ----ITDSGAPGTEFL----GMTPIIDGGI--TWIMPLAAALSSVALGLASNKINPLQRE 161

Query: 512 ADKGQAMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
             + +    N + + + +        G+  YW  SN++SI+ Q V
Sbjct: 162 QSRAEKNTTNGLSIAMSLVLAIYVVCGMAFYWVCSNLLSILVQVV 206


>gi|195995947|ref|XP_002107842.1| hypothetical protein TRIADDRAFT_51760 [Trichoplax adhaerens]
 gi|190588618|gb|EDV28640.1| hypothetical protein TRIADDRAFT_51760 [Trichoplax adhaerens]
          Length = 325

 Score = 65.8 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 77/223 (34%), Gaps = 39/223 (17%)

Query: 360 FGIAIMLTTVFVKLLFF-PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA---- 414
           + + I +TT+ ++     PL   Q   +A +  +QP + E+ E  K +     ++     
Sbjct: 72  WWMTIAVTTITLRTCITLPLTIYQQKKSAKLVLLQPVVKEISEAVKYNVATKCRREDLPV 131

Query: 415 --------------MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
                         +  LYK     P         Q+P++ +I   +      +  P   
Sbjct: 132 EVAEERYKTLFSGMVRDLYKKEGCQPFKLFLLPWTQMPLWISISLGLRDLSIYKQDPAMA 191

Query: 461 -----WIKDLAAADPTNIFTL-FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
                W  +L   DP  I  + FG+           G              + +P     
Sbjct: 192 TEGLAWFSNLLLPDPAWILPICFGLCNLLNIEINAAG--------------RQAPGRIQA 237

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
               +   + +V V   +  P+ +  YW+ S+  S+VQ +++M
Sbjct: 238 IMKKVFVTLSIVMVPVATQIPSCMSFYWTLSSFYSLVQNSILM 280


>gi|157120946|ref|XP_001653718.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes
           aegypti]
 gi|157120948|ref|XP_001653719.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes
           aegypti]
 gi|157120950|ref|XP_001653720.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes
           aegypti]
 gi|108874748|gb|EAT38973.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes
           aegypti]
 gi|108874749|gb|EAT38974.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes
           aegypti]
 gi|108874750|gb|EAT38975.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes
           aegypti]
          Length = 338

 Score = 65.8 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 69/239 (28%), Gaps = 32/239 (13%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
            G  ++ +  +  ++      +        +     K+       +          +  K
Sbjct: 71  SGLPWWASIILSTVLVRTVVTMPLAIYQNKIVARLEKISLEMP--EIVKQLKMETAVAMK 128

Query: 396 IDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
                EK  +       K     L    N +P      +  QIP++  +   I   + M 
Sbjct: 129 KFHWSEKEARIMYNHSLKKQWNNLVVRENCHPAKTMILLWGQIPLWVMMSVSIRNMVHM- 187

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG---------IWPIIMSL---SMF 502
                         DP++I          L GF  +          I P+ M L   ++ 
Sbjct: 188 ------------LPDPSSIEAQITFTELTLGGFGWIPNLTEVDQSLILPVAMGLINLTII 235

Query: 503 IQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
               +           I   M     V+ +   ++ P+ L +YW  S+   + Q  ++M
Sbjct: 236 EIQNLVRTREPSRLQKIFTNMFRGLSVLMIPVAATVPSALCLYWVTSSACGLGQNLLLM 294


>gi|312073696|ref|XP_003139636.1| hypothetical protein LOAG_04051 [Loa loa]
 gi|307765201|gb|EFO24435.1| hypothetical protein LOAG_04051 [Loa loa]
          Length = 402

 Score = 65.4 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 84/225 (37%), Gaps = 27/225 (12%)

Query: 339 FYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
           ++  A    + + Y +  +   + + ++  T+ ++LL   +    +     ++  + +ID
Sbjct: 154 WWSPASWFRLALEYMHFNIDLPWWLTVICATISLRLLMIFVPIASHRLMGRVQLHKKEID 213

Query: 398 ELREKFKQSPPQVLQKAMIQLYKT-------HNINPLAGCWPILLQIPVF----FAIYKV 446
           E +EK + +         ++  K         +I        + L   +F     A+ K+
Sbjct: 214 EFKEKMESAQRSGNFLQTMEAQKELKDFLKTKDIKLYRQFMFMSLNGAIFMTQFIAVKKL 273

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             +S          W KDL   DP  +  L   +       +           +      
Sbjct: 274 ADVSFPGMSTGGLYWFKDLTMPDPYYLLPLVSAITVAAVFKIGAE-----TGGT---NQS 325

Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           +SP    + Q M+    P++ VFA S+    + +YW  SN+IS++
Sbjct: 326 ISP----QIQKMLTRIGPIM-VFACST--KAIALYWCTSNMISVI 363


>gi|224049074|ref|XP_002192470.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 340

 Score = 65.4 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 67/181 (37%), Gaps = 27/181 (14%)

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
                  +     ++    +  +    + +++ + +LY   N +P      + +Q+P++ 
Sbjct: 129 AQRLRYEVSARGKQLGWSEKVARLHFARNMRRIVTELYIRDNCHPFKATLLLWVQVPMWV 188

Query: 442 AIYKVISI-SLEMRHA--------PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
            +   +   S+  R +            W  DL A D T I                V +
Sbjct: 189 CVSLALRNCSIGARGSAVQEQFSSGGALWFTDLTAPDSTWIL---------PVSLGLVNL 239

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVIS 549
             + +  S   Q KM   P  + Q ++ N+     VV +   ++ P+ + +YW  S+++ 
Sbjct: 240 LVVEIFAS---QTKM---PVSRIQKLLTNFFRTVSVVMIPIAATVPSSMALYWLSSSLVG 293

Query: 550 I 550
           +
Sbjct: 294 L 294


>gi|126700823|ref|YP_001089720.1| hypothetical protein CD3204 [Clostridium difficile 630]
 gi|115252260|emb|CAJ70101.1| putative membrane protein [Clostridium difficile]
          Length = 216

 Score = 65.4 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 17/214 (7%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
             FI+  +  L+S  +N  G+FGI+I+L T+ VKL+  PL+ KQ  S    + +  K++ 
Sbjct: 1   MDFISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEY 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           ++EK+K    ++ ++  IQ+    ++  + GC  +L+Q+PV +A+Y V     +      
Sbjct: 61  IKEKYKNDTKELEKQ--IQVSSVESMKSMLGCLIVLVQMPVVYALYHVCLDMTKEFTTII 118

Query: 459 WGWIKDLAAADPTNIFT-LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
             WI +L   D   I   ++ ++        ++               K++       Q 
Sbjct: 119 IPWIANLGTFDNLFILPCIYTLIMLASNLVNYIPYL------------KINSQVKFNKQM 166

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
            ++    +  +      P  + +Y+  S + S++
Sbjct: 167 AVVT--TITSLILTVRTPVAIGLYFITSAIYSLI 198


>gi|268637951|ref|XP_640859.2| hypothetical protein DDB_G0281171 [Dictyostelium discoideum AX4]
 gi|256012950|gb|EAL66882.2| hypothetical protein DDB_G0281171 [Dictyostelium discoideum AX4]
          Length = 418

 Score = 65.4 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 82/226 (36%), Gaps = 31/226 (13%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
            F    +  L          +    + T + +++L  PLA +     A M+ ++  +++ 
Sbjct: 140 QFNFDLIAKLNELHVQYGLPWVSIFVGTAIAIRVLTLPLAIRNQRDAAKMRLVKQDMEKH 199

Query: 400 REKFKQSPPQVLQKA--MIQLYKTHNINPLAGCWPILLQIPVF---FAIYKVISISLEMR 454
                 +    ++ A    + +  H+ +P+      +LQ+P     F   + +S    + 
Sbjct: 200 SYLNDGTQEGRIKIAELQKKSFAKHDTSPMKTLGLNMLQMPFIIYPFIFLRQLSGDTNLL 259

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-AD 513
                 W K+L+ ADP                     I P++ S+  +  ++ S      
Sbjct: 260 VDAGALWFKNLSMADPYY-------------------ILPLVSSIFQYGSVRFSMTDDTS 300

Query: 514 KGQAMILN---WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
                I+    ++P+VF      F A L IYW+ +++I       +
Sbjct: 301 PMMKTIMTSFCFLPLVFTI---HFAASLNIYWAVNSMIFAFTNWFL 343


>gi|326918900|ref|XP_003205723.1| PREDICTED: mitochondrial inner membrane protein COX18-like, partial
           [Meleagris gallopavo]
          Length = 229

 Score = 65.4 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 63/176 (35%), Gaps = 23/176 (13%)

Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMI-QLYKTHNINPLAGCWPILLQIPVFFAI 443
                 +++ +     EK  +   +   + +I +LY   N +P      + +QIP++  +
Sbjct: 25  QLRYEVSVRGRQLGWSEKVARFHFKKNLRRIITELYIRDNCHPFKATLLVWVQIPMWVCV 84

Query: 444 YKVISI---------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
              +             E        W  DL A D T I              + +G+  
Sbjct: 85  SLALRNCSVGALDSEVQEQFSTGGTLWFTDLTAPDSTWIMP------------VSLGLLN 132

Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           ++  + +F   K+      K     L  + VV V   ++ P+ + +YW  S+ + +
Sbjct: 133 LL-IVEIFASQKLEASRFQKLATNFLRVLSVVMVPVAATVPSSMALYWLSSSFMGL 187


>gi|159903814|ref|YP_001551158.1| putative inner membrane protein translocase component YidC
           [Prochlorococcus marinus str. MIT 9211]
 gi|159888990|gb|ABX09204.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT
           9211]
          Length = 383

 Score = 65.4 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 7/126 (5%)

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSP--PPADKG 515
           G I  LAA          G + FY+ G ++  I  ++    +++ I   +S    P +  
Sbjct: 234 GKIPGLAAKSGFLFIKALGNVGFYVDGSINWDIAILVGGFGVTLVISQVLSGRGMPPNPQ 293

Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           QA      PV+       FP  AG+++Y   +N+   +Q  ++         L   L   
Sbjct: 294 QATAQKITPVMITGMFLFFPLPAGVLLYMVIANIFQAIQTFLL-SQEALPDNLQKILEEQ 352

Query: 574 FSKNYN 579
             +   
Sbjct: 353 LKQQSK 358



 Score = 51.5 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  T+ ++L  FPL+     S   MK  QP + + + + 
Sbjct: 8   NLLIPILDFFYGLVPSYGLAIVALTIVIRLALFPLSAGSIRSARRMKIAQPVMQKRQAEI 67

Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           K    + PQ  Q+ + +L      +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 68  KTRYANNPQKQQEELGKLMGEFG-SPLAGCLPLLVQMPILFALFATLRGS 116


>gi|328882679|emb|CCA55918.1| membrane protein [Streptomyces venezuelae ATCC 10712]
          Length = 243

 Score = 65.4 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 89/216 (41%), Gaps = 23/216 (10%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L T+ V+L   PL++           I P++  LR+K  ++P   L+KA+++L+    
Sbjct: 28  IVLFTMLVRLAIHPLSRASARGQKARTRIAPELAALRKKHAKNPE-RLKKAVLELHAREK 86

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA--ADPTNIFTLFGILP 481
           ++P AG  P LLQ P F  +Y + S     R A    +   L    AD  +   + G   
Sbjct: 87  VSPFAGILPSLLQAPAFLLMYHLFSGD---RMAGHTLFAAPLGDHWADALSHGGVLG--- 140

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKM------------SPPPADKGQAMILNWMPVVFVF 529
               G +++ ++ ++ +++ F   +              P P     A ++  +    + 
Sbjct: 141 --PAGRVYLVLFALVAAVATFTYRRTKAQLAAQPLDLGQPTPGAGAIAKVMPLLSFATLI 198

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
           +++  P    +Y   S   +  ++A + +       
Sbjct: 199 SVAVVPLAAALYIVTSTAWTAAERAFLFRDQQGPEE 234


>gi|315659748|ref|ZP_07912607.1| membrane protein OxaA [Staphylococcus lugdunensis M23590]
 gi|315495036|gb|EFU83372.1| membrane protein OxaA [Staphylococcus lugdunensis M23590]
          Length = 188

 Score = 65.4 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 28/140 (20%)

Query: 427 LAGCWPILLQIPVFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484
           + GC P+L+QIP+ F +Y  +    S  +   P + W   L + D               
Sbjct: 56  MFGCLPMLIQIPILFGLYATLKWPTSGGILSHPTFMWFH-LTSPDSM------------- 101

Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLII 540
                     +I     F Q  +S     K Q M+   M    P+  ++     P+ L +
Sbjct: 102 --------MAMIAGFMYFGQSWLSARQMPKEQRMMGYVMVIVSPLFILYIAFQSPSALAL 153

Query: 541 YWSWSNVISIVQQAVIMKMH 560
           YWS +  + I+Q  +  +  
Sbjct: 154 YWSVNAALLILQTIISQRQT 173


>gi|195435826|ref|XP_002065880.1| GK16110 [Drosophila willistoni]
 gi|194161965|gb|EDW76866.1| GK16110 [Drosophila willistoni]
          Length = 362

 Score = 65.4 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 70/239 (29%), Gaps = 32/239 (13%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
             G  ++ +     L+      +        +T    K+     A            +  
Sbjct: 91  YSGLPWWASIVASTLLFRGVVTLPLTIYQHKITARIEKIALEMPA--IVEELKREAAMAK 148

Query: 395 KIDELREKFKQSPPQVLQKAM-IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
              +  +K  Q   +   K    +L    N +P+     +  QIP++      +   + M
Sbjct: 149 HKFKWSDKQTQVVYRRSIKKQWQKLIVRDNCHPMKTLIVLWGQIPLWIFQSVALRNLVYM 208

Query: 454 RHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
              P                +GWI +L   D + I           P  + +    II  
Sbjct: 209 LPDPTTLKAQIIATEMTIGGFGWIPNLTVVDQSYIL----------PVALGLINLGIIEL 258

Query: 499 LSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            SM    +  P          +   + +V +    + P+ L +YW  S+   + Q   +
Sbjct: 259 QSM---TRTRPATRLQNVMNNVFRGLSIVMIPVACTVPSALCVYWVASSSFGLAQNLFL 314


>gi|255028899|ref|ZP_05300850.1| SpoIIIJ protein [Listeria monocytogenes LO28]
          Length = 160

 Score = 65.0 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 3/116 (2%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           Y +    + +  +     G++ + I++ T+ ++LL  PL  KQ  S   M N+QPKI EL
Sbjct: 45  YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 104

Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           +EK+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+    Y+ IS + E
Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE 160


>gi|300869002|ref|ZP_07113605.1| putative inner membrane protein translocase component YidC
           [Oscillatoria sp. PCC 6506]
 gi|300332982|emb|CBN58797.1| putative inner membrane protein translocase component YidC
           [Oscillatoria sp. PCC 6506]
          Length = 369

 Score = 65.0 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DKGQAMILNWMPVVFVFALSS 533
           G +         + +  +   +S+++   +S        +  QA I    PV+F      
Sbjct: 245 GAIDPDGKIHWDILVMILGFGISLYVNQTLSGQTQGPNDNPQQATINKLTPVIFSGMFLF 304

Query: 534 FP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           FP  AG+++Y   +N+   VQ A I+        L   +    +K    +
Sbjct: 305 FPLPAGVLMYMLVANIFQTVQ-AFILSREPLPDNLQKIVDEAEAKAKKDK 353



 Score = 53.5 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 4/108 (3%)

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE---K 402
           M  ++ +FY +V ++G+AI+  T+ ++   +PL      +   MK  QP + E  E   K
Sbjct: 1   MLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSLRNMRRMKVAQPLMKERVEQIQK 60

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
             +  P   Q+ M ++YK    NPLAGC+P+L+Q+PV FA++  +  S
Sbjct: 61  LHKDNPAKQQEEMSKVYKEFG-NPLAGCFPLLVQMPVLFALFATLRGS 107


>gi|70725620|ref|YP_252534.1| hypothetical protein SH0619 [Staphylococcus haemolyticus JCSC1435]
 gi|68446344|dbj|BAE03928.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 277

 Score = 65.0 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 88/244 (36%), Gaps = 39/244 (15%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
             E    + +  F+     +L         N+G+AI++  + ++L+  PL   Q  +   
Sbjct: 23  HKEDQHGFFYTIFVKPMDMLLHFLGRTFHENYGLAIIVIVLIIRLVLMPLMFIQVKNIHI 82

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKA--------MIQLYKTHNINP---LAGCWPILLQI 437
           M+     +    EK +        +         +++ Y  + INP   L G  PIL+QI
Sbjct: 83  MRGKTQVVKPEIEKLQDKLKNADTQEERTAANKLLMKKYNDYGINPFKSLVGTLPILIQI 142

Query: 438 PVFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495
           P+   +Y  I    S  +   P + W  +L   D                      I   
Sbjct: 143 PILLGLYACIKYPTSGGIIEHPHFLWF-NLMHTD---------------------LIMTF 180

Query: 496 IMSLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           I +L  FIQ  ++     K +      ++   P+  ++A     + L +YW+ S    I+
Sbjct: 181 IAALLYFIQPLVNAMHYPKEERRTYYVMMVLSPLFIIYASLQSASALSLYWAISATFLII 240

Query: 552 QQAV 555
           Q   
Sbjct: 241 QMHF 244


>gi|224550131|gb|ACN54150.1| 60 kDa inner membrane protein [Wolbachia endosymbiont of Nasonia
           longicornis]
 gi|224550135|gb|ACN54152.1| 60 kDa inner membrane protein [Wolbachia endosymbiont of Nasonia
           giraulti]
          Length = 125

 Score = 65.0 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 1/121 (0%)

Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITILPGKSITTTN 306
             +W G +DKYW +  IP K    +   K+ + +   ++QA F      ILPG S +T N
Sbjct: 5   EKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNIDKFQADFVRPYTHILPGTSASTLN 64

Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366
           + FAGAK+   +  Y+  L IP F+  +D+G  YFI KP+F+L+ YF  ++ NFG AI+L
Sbjct: 65  YFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGKAILL 124

Query: 367 T 367
            
Sbjct: 125 L 125


>gi|145350968|ref|XP_001419863.1| Oxa1 family transporter: inner membrane ALBINO3 chloroplast
           [Ostreococcus lucimarinus CCE9901]
 gi|144580095|gb|ABO98156.1| Oxa1 family transporter: inner membrane ALBINO3 chloroplast
           [Ostreococcus lucimarinus CCE9901]
          Length = 427

 Score = 65.0 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 18/142 (12%)

Query: 422 HNINPLAGCWPILLQIPVFF-AIYKVISISLEMRH----APFWGWIKDLAAADPTNIFTL 476
              +P       L QIP F  A+  V  ++ +  +         W +DL           
Sbjct: 82  TGAHPAWLVAGPLAQIPFFLCAVMAVRRLAADGANNGLVTGGALWFQDLTVPAVDVAMMT 141

Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI------LNWMPVVFVFA 530
             + P+        GI P++ + ++F  +  +   A      +      L WM +  +  
Sbjct: 142 APMGPYG-------GILPVLTAAALFANVNANFASAAAQSRGMTIVKLVLEWMTLPMLVI 194

Query: 531 LSSFPAGLIIYWSWSNVISIVQ 552
               P  +  YW  S+  ++ Q
Sbjct: 195 GMQLPQAVHCYWLTSSAWALAQ 216


>gi|225022040|ref|ZP_03711232.1| hypothetical protein CORMATOL_02072 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945161|gb|EEG26370.1| hypothetical protein CORMATOL_02072 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 386

 Score = 65.0 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 94/269 (34%), Gaps = 38/269 (14%)

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
            I  + +      ++ +   +  +      ++  FG+ I++  +      + +     ++
Sbjct: 3   GIFMYPVSGIMKLWHILLHSVLGINDSLAWVLSIFGLIIVVRGLIA-PAQWYILHSGRLT 61

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
                 I     E   +          +   ++ K++     AGC P L+QIPVF  +Y+
Sbjct: 62  VMMRPEITALYKEYENETSYEKISERDQREREIRKSYGYRVSAGCIPPLIQIPVFLGLYQ 121

Query: 446 VISISLEMRHAPFWG---WIKDLAAADPTNIFTL-FGILP------FYLPGFMHVG---- 491
           V+      ++         I  L++AD ++     FG +P           F  +G    
Sbjct: 122 VLLRMARPKNGLDSQVHDPIGMLSSADVSSFLHARFGSIPVSAYVSMTPQQFARLGTNYE 181

Query: 492 -----IWPIIMS--LSMFIQMK-------MSPPPADKGQAMILNW---------MPVVFV 528
                + P++++  L  FI M        ++     +   +++             +V  
Sbjct: 182 EVMRFVAPLLLATALITFINMSITVIRNYLTIDHQSRTAIVVMRMVAVATVCTPFLLVSG 241

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIM 557
                 P  ++ YW  +N+ ++VQ   I 
Sbjct: 242 GLTGPVPTAIVAYWVANNLWTLVQNVTIY 270


>gi|319893042|ref|YP_004149917.1| short form OxaI-like inner membrane protein translocase component
           YidC [Staphylococcus pseudintermedius HKU10-03]
 gi|317162738|gb|ADV06281.1| short form OxaI-like inner membrane protein translocase component
           YidC [Staphylococcus pseudintermedius HKU10-03]
          Length = 288

 Score = 64.6 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 104/263 (39%), Gaps = 41/263 (15%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-- 395
           +  F+     ++     +L  N+G+AI++  + V+++  P     Y +   M+       
Sbjct: 33  FNTFVQPMDRLIHWLGDHLNNNYGLAIIIIVLVVRIVLLPFMLSNYKNMHMMREKMKIAK 92

Query: 396 ------IDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKV 446
                  ++++    Q       + M+Q+YK +N+NP+A   GC P++LQ+P+   ++ V
Sbjct: 93  PEITEAQEKVKRARTQEDKMAANQEMMQVYKKYNMNPMASMLGCLPLILQMPIIMGLFFV 152

Query: 447 ISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           +       +     + W   L   D                    + I  I   +  FIQ
Sbjct: 153 LKYPSGGGITKYSDFLWFH-LDKPD--------------------IWITTI-AGVLYFIQ 190

Query: 505 MKMSPPPADKGQAMILNWMPVVF----VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
             +S     + Q  +   M ++     V+   S  A L +YWS S    +VQ  +   ++
Sbjct: 191 AYVSSFNMPQEQRQMGYMMMIISPIMIVWISFSSAAALGLYWSVSAAFLVVQTYIANVVY 250

Query: 561 G--AEIGLIDRLRSTFSKNYNSQ 581
           G  A+  +   ++   ++   ++
Sbjct: 251 GKKAKEEVAPLIKKFEAEKNGNK 273


>gi|328767547|gb|EGF77596.1| hypothetical protein BATDEDRAFT_27419 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 324

 Score = 64.6 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 97/313 (30%), Gaps = 51/313 (16%)

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF--YFIAKPM 346
            +  E       SI +++   +       +        +  FE+     W+         
Sbjct: 1   MADAEQQFSSTTSIESSDLSLSPVSLLVNLMDTIHATPLIAFELYSGTPWWLVIVGTTIF 60

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
              M      + N      L  +   L+ +       +   +      +    ++     
Sbjct: 61  LRTMCTLPLAIQNKQRTDRLRKLQPVLMAWESTLGLQLKHGHRTGNLQQDKNYKKMASLF 120

Query: 407 --PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI----SLEMRHAPFW- 459
               +  ++   QLYK +  NPL       +QIP+F ++   +       +     P   
Sbjct: 121 VISGKTYKQKTSQLYKEYRCNPLYTFILPWVQIPLFISMSFALRWLAAFPVIWLGTPSSF 180

Query: 460 ---------GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI------- 503
                     W  DL  ADPT                    I PII+  +M +       
Sbjct: 181 AAGMDVEGTLWFDDLTVADPTM-------------------ITPIIIG-TMHLINIELNS 220

Query: 504 QMKMSPPPADKGQA----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ--QAVIM 557
            ++ +P            M +    ++ +   +  P  + +YW  S V S++Q    +++
Sbjct: 221 TLRSNPNTQRTSGQIAFRMFMRSFAILMIPISAYVPMAITLYWLASAVYSMLQNISFLVI 280

Query: 558 KMHGAEIGLIDRL 570
           + H  ++ L +++
Sbjct: 281 EKHRVKLSLKEKI 293


>gi|213400723|gb|ACJ47010.1| hypothetical protein [Wolbachia endosymbiont of Folsomia candida]
          Length = 133

 Score = 64.6 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/125 (36%), Positives = 65/125 (52%), Gaps = 2/125 (1%)

Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282
            D  L E  Y +I K  +     S  +W G +DKYW +  IP K    +   K+ + +  
Sbjct: 8   FDNKLEEWTYKNIAKKHLVKASTSEKNWFGFADKYWLTAIIPDKSEKINVSIKHTNVNDV 67

Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342
            ++QA F  +  TILPG S +  N  FAGAK+   +  Y+  L IP F+  ID+G  YFI
Sbjct: 68  DKFQADFVKSYKTILPGTSASNVNHFFAGAKKLKLLDSYKDSLNIPLFDKAIDFGVLYFI 127

Query: 343 AKPMF 347
            KP+F
Sbjct: 128 TKPVF 132


>gi|239982031|ref|ZP_04704555.1| hypothetical protein SalbJ_21534 [Streptomyces albus J1074]
 gi|291453882|ref|ZP_06593272.1| preprotein translocase subunit YidC [Streptomyces albus J1074]
 gi|291356831|gb|EFE83733.1| preprotein translocase subunit YidC [Streptomyces albus J1074]
          Length = 250

 Score = 64.6 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 19/223 (8%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
             +   AI+L T FV+LL  PL++           +QP++  LR+K+K++P   LQKA +
Sbjct: 24  TASTAAAIVLFTAFVRLLVLPLSRAAARGQKARTRLQPQVVALRKKYKKNPE-RLQKATL 82

Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA-------AD 469
           +LY    ++P +G  P L Q+P FF +   +  S E+  AP       L A        D
Sbjct: 83  ELYAAEKVSPFSGILPSLCQLPAFF-LMYHLFASAEIGGAPNTLLGHSLFAAPLGDRWKD 141

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPII---------MSLSMFIQMKMSPP-PADKGQAMI 519
                 LFG           V +   +         ++ S  +    +   P       I
Sbjct: 142 ALADGGLFGAHGQVYLALFAVVVAVAVYNYRRTKRQLAASAALTAGDTEAMPGMGAMNKI 201

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
              M  + +F +   P    +Y   S + + V++ V+ +   A
Sbjct: 202 APLMSFMTLFTVGFVPLAAALYVVTSTLWTAVERTVLYREEPA 244


>gi|225619513|ref|YP_002720770.1| inner membrane protein [Brachyspira hyodysenteriae WA1]
 gi|225214332|gb|ACN83066.1| inner membrane protein [Brachyspira hyodysenteriae WA1]
          Length = 996

 Score = 64.2 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 93/236 (39%), Gaps = 26/236 (11%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVS 385
           F+ML +   +        +   +      + G+++ L ++ +  L  PL       Q   
Sbjct: 3   FDMLYNITIYPIEFIIEILYYLFNNEFRSSSGMSLFLLSLCINFLSLPLYNIAESWQAKE 62

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
            A    ++P ID ++  +K     +L +   ++     I    G   +L+QIP F A Y 
Sbjct: 63  RAIQDKMKPMIDNIKAVYKGDQRYLLIRTCQRINGYKTIYAFRGTLGLLIQIPFFIAAYN 122

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ- 504
            +     +     + +IKDL+  D                G + + + P +M+L   +  
Sbjct: 123 FVHSLTGLNGQS-FLFIKDLSKPD-----------ALIKIGNISINLLPFLMTLFSLLAG 170

Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
                K+    +       L  + ++F+  L + P+GL+ YW+ + + S ++  +I
Sbjct: 171 FVYARKLKLKESLP-----LYAVSLIFLVLLYTSPSGLLFYWTINCLFSFIKNIII 221


>gi|194751991|ref|XP_001958306.1| GF10853 [Drosophila ananassae]
 gi|190625588|gb|EDV41112.1| GF10853 [Drosophila ananassae]
          Length = 352

 Score = 64.2 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 71/238 (29%), Gaps = 30/238 (12%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
             G  ++ +  +   +      +        +T    K+     A            +  
Sbjct: 82  YTGLPWWGSIVLSTFLFRSVVTLPLTVYQHKITARIEKIALEMPA--IVEELKKEAAMAK 139

Query: 395 KIDELREKFKQSPPQVLQKAM-IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           +  +  +K  Q   +   K    +L    N +P+     +  Q+P++      +   + M
Sbjct: 140 QKFKWSDKQTQIVYRRSIKKQWQKLIVRDNCHPMKTLIVLWGQVPLWIFQSVALRNLVYM 199

Query: 454 RHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
              P                +GWI +L   D + I           P  + +    II  
Sbjct: 200 LPDPMTIQAQIVATELTIGGFGWIPNLTVVDSSYIL----------PVTLGIINLAIIEV 249

Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            SM       P         +   + VV V    + P+ L +YW  S+   + Q  ++
Sbjct: 250 QSM--TRTRPPTRLQNIANNVFRGLSVVMVPVACTVPSALCVYWVASSSFGLAQNLLL 305


>gi|71282283|ref|YP_269719.1| hypothetical protein CPS_3020 [Colwellia psychrerythraea 34H]
 gi|71148023|gb|AAZ28496.1| putative membrane protein [Colwellia psychrerythraea 34H]
          Length = 216

 Score = 64.2 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 88/226 (38%), Gaps = 29/226 (12%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            W +F +  +  +    + +     +AI+L T+  +L+  P+      +    K     +
Sbjct: 3   IWNFFTSFIVQSIAFLTHEVGVGEAVAIILFTLIGRLVLMPINLLAMANMYRNKKAISAL 62

Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVISISL 451
               +K     +  P  + K+ + LYK +NI  L       I  Q    F +++ +   +
Sbjct: 63  KPELDKIKVIHKDKPNEIAKSTMALYKKNNIKILDKKSVINIASQGVFGFGMFQALQQIV 122

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
                  + WI ++A  D                         +++ +  +  M M P  
Sbjct: 123 ---FNSKFAWIANIAKPD---------------------VALALLVGVITYFSMIMMPGS 158

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           A++   ++     ++ +  L SFP+ + +YW+ S+V S++Q  V+ 
Sbjct: 159 AEQTSTLLFIIPAIICIITLISFPSAIGLYWATSSVTSLLQSLVLN 204


>gi|289524417|ref|ZP_06441271.1| inner membrane insertion protein [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289502344|gb|EFD23508.1| inner membrane insertion protein [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 65

 Score = 64.2 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM---HGAEIGLIDRLRSTFSKNYN 579
           P+  +F   S P G+++YW  S++I +VQQA + +     GA+  ++ + +   ++   
Sbjct: 5   PLFMMFICLSLPGGVLLYWGVSSLIGVVQQAWVQRRASVEGAKKPVLYKEKPRSAEKPK 63


>gi|282901452|ref|ZP_06309377.1| 60 kDa inner membrane insertion protein [Cylindrospermopsis
           raciborskii CS-505]
 gi|281193731|gb|EFA68703.1| 60 kDa inner membrane insertion protein [Cylindrospermopsis
           raciborskii CS-505]
          Length = 389

 Score = 64.2 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 36/108 (33%), Gaps = 6/108 (5%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALSSF 534
           G +         +    I   +S++    +   +    +  Q  +    PV+F      F
Sbjct: 257 GAIDPDGKIHWDIVGMIIFFGISLYFSQMLSGQNSSGGNPQQETVNKITPVIFSGMFLFF 316

Query: 535 P--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           P  AG+++Y    NV   +Q  ++ +       L   +     +   +
Sbjct: 317 PLPAGVLMYMVIGNVFQTLQTYILSR-EPLPEELQKIVAIQEKEKQAA 363



 Score = 53.1 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY +  ++G+AI+  T+ ++   +PL+     S   M+ +Q
Sbjct: 1   MDFGIGFLSNNVMLPIIDFFYGVFPSYGLAIVALTLIIRFALYPLSAGSIRSMRRMRIVQ 60

Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + +     K +       Q+  +   +    NPLAGC P+LLQ+PV  A++  +  S
Sbjct: 61  PVMQKRMAEIKERYKDDPQKQQEEMVNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGS 119


>gi|21355539|ref|NP_648286.1| CG4942 [Drosophila melanogaster]
 gi|7294995|gb|AAF50323.1| CG4942 [Drosophila melanogaster]
 gi|17862572|gb|AAL39763.1| LD38503p [Drosophila melanogaster]
 gi|220956584|gb|ACL90835.1| CG4942-PA [synthetic construct]
 gi|220960106|gb|ACL92589.1| CG4942-PA [synthetic construct]
          Length = 351

 Score = 64.2 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 69/242 (28%), Gaps = 38/242 (15%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
             G  ++ +  +   +      +        +T    K+     A            +  
Sbjct: 81  YSGLPWWASIVLSTFLFRSVVTLPLTIYQHKITARIEKIALEMPA--IVEELKKEAAMAK 138

Query: 395 KIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
              +  EK  Q   +   K   Q L    N +P+     +  QIP++      +   + M
Sbjct: 139 HKFKWSEKQTQIVYRRSIKKQWQNLIVRDNCHPMKTMIVLWGQIPLWIFQSVALRNLVYM 198

Query: 454 RHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
              P                +GWI +L   D + I           P  + +    II  
Sbjct: 199 LPDPTSIQAQIVTTEMTIGGFGWIPNLTVVDNSYIL----------PVALGLINLAIIEV 248

Query: 499 LSMFIQMKMSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
                   MS          I       + VV V    + P+ L +YW  S+   + Q  
Sbjct: 249 ------QAMSRTRPSTRLQNIANNVFRGLSVVMVPVACTVPSALCVYWVASSSFGLAQNL 302

Query: 555 VI 556
           +I
Sbjct: 303 LI 304


>gi|219856430|ref|YP_002473552.1| hypothetical protein CKR_3087 [Clostridium kluyveri NBRC 12016]
 gi|219570154|dbj|BAH08138.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 220

 Score = 63.9 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 98/229 (42%), Gaps = 16/229 (6%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
           M  +  +   I   +  ++ Y +++ G++GI+I+L T+ V+ +  P++ KQ  S  + + 
Sbjct: 1   MNKERIYMNIILNVLNTVLGYLFSITGDYGISIILLTLIVRTILLPMSLKQRKSIHHQQV 60

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +  K++ELR K+K +  +   +  ++ Y   N   + GC   LLQ+PV  +++ V +   
Sbjct: 61  LSKKMEELRIKYKHNKDK--LQREMEKYYKQNTKNMFGCLVTLLQLPVISSLFIVFNKMP 118

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
                    WI ++   D   I  +   L    P F+     P +  +      K++   
Sbjct: 119 AQIGTVIVPWIVNMKMPDNYFIIPIIYTLVSLSPNFISY--IPFLKIVKEVQVQKINLVV 176

Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
                        ++ +      P  + IY   + V S+  + VI +++
Sbjct: 177 TS-----------IISMLITFKAPITIGIYLITTGVFSLF-EEVIYRLY 213


>gi|47227450|emb|CAG04598.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 436

 Score = 63.9 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 85/259 (32%), Gaps = 40/259 (15%)

Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTV 369
                  +     + ++    +       Y     +  L+ + +  +G      I++ TV
Sbjct: 96  APTAAEVLQVAATEQSLAELGLA-----GYTPVGLIQNLLEFMHVDIGLPWWGAIVVGTV 150

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-------LYKTH 422
             +L  FP+  K     A + N+ P++ +L  +  ++     +    +         K H
Sbjct: 151 LARLAVFPVIVKGQREAAKLNNVLPEMTKLTNRMNEAKQSGNKFEFGKAYSDLTLFQKKH 210

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
           ++NPL G    L+Q P+F + +  +     +                P    +L G   F
Sbjct: 211 DVNPLRGFLVPLVQAPIFISFFIALRKMAYL----------------PVPQRSLGGCSMF 254

Query: 483 YLPGFMHVGIWPIIMSLS--MF---IQMKMSPPPADKGQAMILNWMPVVFV----FALSS 533
           +        +  ++M     MF        +   A   Q  +     +         LS+
Sbjct: 255 HCVPGSEGNVLLVLMLFCKPMFHSGFSRIENQFAAHSYQ--VYLLFALSLTKCRLLLLSN 312

Query: 534 FPAGLIIYWSWSNVISIVQ 552
            P  +  YW  SN  S+ Q
Sbjct: 313 APQAVFTYWLTSNCFSLGQ 331


>gi|254431771|ref|ZP_05045474.1| inner membrane protein OxaA [Cyanobium sp. PCC 7001]
 gi|197626224|gb|EDY38783.1| inner membrane protein OxaA [Cyanobium sp. PCC 7001]
          Length = 379

 Score = 63.9 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 10/89 (11%)

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--PADKGQAMILNWMPVVFVFAL 531
           F   G + + + G +           ++F+   +S    P +  Q+      PV+     
Sbjct: 256 FMTDGSVNWDIAGLVGA------FGATLFLSQILSGMGMPPNPQQSTANKITPVMITAMF 309

Query: 532 SSFP--AGLIIYWSWSNVISIVQQAVIMK 558
             FP  AG+++Y   +N+   +Q  ++ +
Sbjct: 310 LFFPLPAGVLLYMVVANIFQALQTFLLSR 338



 Score = 55.8 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  TV ++L  FPL+     +   M+  QP + + + + 
Sbjct: 8   NLLLPILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRNARRMRIAQPVMQKRQAEI 67

Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           K    + PQ  Q+ + +L K    +PLAGC P+L+Q+P+ FA++  +  S
Sbjct: 68  KSRYANNPQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116


>gi|254520700|ref|ZP_05132756.1| inner membrane insertion protein [Clostridium sp. 7_2_43FAA]
 gi|226914449|gb|EEH99650.1| inner membrane insertion protein [Clostridium sp. 7_2_43FAA]
          Length = 254

 Score = 63.9 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 17/209 (8%)

Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410
                   ++ +AI + T+ ++LL  PL  K   S A M+ IQP+++ +++K+    PQ 
Sbjct: 27  FNMEPSGVSYVLAIAIFTIIIRLLILPLNIKANRSNARMQEIQPELNAIQKKYAN-DPQK 85

Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAAD 469
           +Q    +  K +N++   GC P LL +P+ FA+Y V           P + WI ++   D
Sbjct: 86  MQAEYSKCMKENNVSMFGGCLPTLLPLPILFALYYVFMNIDKGSVVHPSFLWIPNVFEKD 145

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529
           P  I  +   L  YLP  +              +   M            +N M    + 
Sbjct: 146 PYFIMPVLAFLSTYLPSLL--------------LTKSMPKNENSPMNMGSMNIMMAGMMG 191

Query: 530 AL-SSFPAGLIIYWSWSNVISIVQQAVIM 557
            +  +F + L+IYW     I + Q   + 
Sbjct: 192 VMAINFSSLLVIYWVIGGAIQLAQTYFLN 220


>gi|224550133|gb|ACN54151.1| 60 kDa inner membrane protein [Wolbachia endosymbiont of Nasonia
           longicornis]
          Length = 125

 Score = 63.9 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 46/121 (38%), Positives = 69/121 (57%), Gaps = 1/121 (0%)

Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITILPGKSITTTN 306
             +W G +DKYW +  IP K    +   K+ + +   ++QA F      ILP  S +T N
Sbjct: 5   EKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNIDKFQADFVRPYTHILPDTSASTLN 64

Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366
           + FAGAK+   +  Y+  L IP F+  +D+G  YFI KP+F+L+ YF  ++ NFG AI+L
Sbjct: 65  YFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGKAILL 124

Query: 367 T 367
            
Sbjct: 125 L 125


>gi|119493479|ref|ZP_01624146.1| putative inner membrane protein translocase component YidC [Lyngbya
           sp. PCC 8106]
 gi|119452662|gb|EAW33842.1| putative inner membrane protein translocase component YidC [Lyngbya
           sp. PCC 8106]
          Length = 335

 Score = 63.5 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 10/119 (8%)

Query: 471 TNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMKM-----SPPPADKGQAMILNWM 523
             I  L  +  F   G +H  I    +   +S+++   +     +P   +  Q  I    
Sbjct: 193 LFIDALGRVGAFDEDGVIHWDIVGMILTFGISLYLNQVLSGQNNTPSSGNPQQDTINKIT 252

Query: 524 PVVFV--FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           PV+F   F     PAG+++Y   +N+   VQ   I+        L   +     K   +
Sbjct: 253 PVLFTGMFFFFPLPAGVLLYMLIANIFQTVQS-FILSREPLPENLQKIVEEANLKTAKA 310



 Score = 39.2 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
               + +  +  E  ++  +  P   ++ M ++YK    NPLAGC+P++LQ+P+ FA++ 
Sbjct: 1   MKLTQPLMKERVEKIQQQYKDDPVKQREEMSRVYKELG-NPLAGCFPLVLQMPILFALFA 59

Query: 446 VISIS 450
            +  S
Sbjct: 60  TLRGS 64


>gi|282898270|ref|ZP_06306261.1| 60 kDa inner membrane insertion protein [Raphidiopsis brookii D9]
 gi|281196801|gb|EFA71706.1| 60 kDa inner membrane insertion protein [Raphidiopsis brookii D9]
          Length = 389

 Score = 63.5 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 36/108 (33%), Gaps = 6/108 (5%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALSSF 534
           G +         +    I   +S++    +   +    +  Q  +    PV+F      F
Sbjct: 257 GAIDPDGKIHWDIVGMIIFFGISLYFSQMLSGQNSSGGNPQQETVNKITPVIFSGMFLFF 316

Query: 535 P--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           P  AG+++Y    NV   +Q  ++ +       L   +     +   +
Sbjct: 317 PLPAGVLMYMVIGNVFQTLQTYILSR-EPLPEELQKIVAIQEKEKQAA 363



 Score = 52.7 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY +  ++G+AI+  T+ ++   +PL+     S   M+ +Q
Sbjct: 1   MDFGIGFLSNNVMLPIIDFFYGVFPSYGLAIVALTLIIRFALYPLSAGSIRSMRRMRIVQ 60

Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + +     K +       Q+  +   +    NPLAGC P+LLQ+PV  A++  +  S
Sbjct: 61  PLMQKRMAEIKERYKDDPQKQQEEMVNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGS 119


>gi|322691033|ref|YP_004220603.1| hypothetical protein BLLJ_0843 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320455889|dbj|BAJ66511.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 198

 Score = 63.5 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 11/92 (11%)

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-----SPP-PADKGQ---AMILNW- 522
           I   FG +       + +G+   +M L +F    +     +P    D  Q     +  + 
Sbjct: 22  IADSFGTV-VSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQFRTQKLTAFV 80

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
            P ++V +  + P G+++YW  +N+ +  Q  
Sbjct: 81  FPAIYVVSGGTLPFGVLLYWLTNNLWNFGQTL 112


>gi|317483126|ref|ZP_07942124.1| yidC1 protein [Bifidobacterium sp. 12_1_47BFAA]
 gi|316915425|gb|EFV36849.1| yidC1 protein [Bifidobacterium sp. 12_1_47BFAA]
          Length = 198

 Score = 63.5 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 11/92 (11%)

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-----SPP-PADKGQ---AMILNW- 522
           I   FG +       + +G+   +M L +F    +     +P    D  Q     +  + 
Sbjct: 22  IADSFGTV-VSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQFRTQKLTAFV 80

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
            P ++V +  + P G+++YW  +N+ +  Q  
Sbjct: 81  FPAIYVVSGGTLPFGVLLYWLTNNLWNFGQTL 112


>gi|227547197|ref|ZP_03977246.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|227212317|gb|EEI80213.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
          Length = 191

 Score = 63.5 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 11/92 (11%)

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-----SPP-PADKGQ---AMILNW- 522
           I   FG +       + +G+   +M L +F    +     +P    D  Q     +  + 
Sbjct: 15  IADSFGTV-VSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQFRTQKLTAFV 73

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
            P ++V +  + P G+++YW  +N+ +  Q  
Sbjct: 74  FPAIYVVSGGTLPFGVLLYWLTNNLWNFGQTL 105


>gi|23465351|ref|NP_695954.1| hypothetical protein BL0775 [Bifidobacterium longum NCC2705]
 gi|189439367|ref|YP_001954448.1| preprotein translocase subunit [Bifidobacterium longum DJO10A]
 gi|322689147|ref|YP_004208881.1| hypothetical protein BLIF_0960 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|23325993|gb|AAN24590.1| narrowly conserved hypothetical protein [Bifidobacterium longum
           NCC2705]
 gi|189427802|gb|ACD97950.1| Preprotein translocase subunit [Bifidobacterium longum DJO10A]
 gi|320460483|dbj|BAJ71103.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 198

 Score = 63.5 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 11/92 (11%)

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-----SPP-PADKGQ---AMILNW- 522
           I   FG +       + +G+   +M L +F    +     +P    D  Q     +  + 
Sbjct: 22  IADSFGTV-VSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQFRTQKLTAFV 80

Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
            P ++V +  + P G+++YW  +N+ +  Q  
Sbjct: 81  FPAIYVVSGGTLPFGVLLYWLTNNLWNFGQTL 112


>gi|78779670|ref|YP_397782.1| putative inner membrane protein translocase component YidC
           [Prochlorococcus marinus str. MIT 9312]
 gi|78713169|gb|ABB50346.1| putative inner membrane protein [Prochlorococcus marinus str. MIT
           9312]
          Length = 380

 Score = 63.5 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517
           I  LAA          G + FY+ G ++  I  ++    L++ +   +S    PA+  Q+
Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGAINWDIATLVGAFGLTLLLSQVLSSQGMPANPQQS 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 P++       FP  AG+++Y   +N+    Q  ++ K
Sbjct: 296 TANKITPIMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK 338



 Score = 50.0 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 62/114 (54%), Gaps = 4/114 (3%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +   K +  ++ +FY LV ++G+AI+  TV +++  FPL+     S   MK  QP +   
Sbjct: 4   FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMKTR 63

Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           + + K      P+  Q+ + +L      +PLAGC P+++Q+P+ FA++  +  S
Sbjct: 64  QAEIKSKFSGDPKKQQEELGKLMNEFG-SPLAGCLPLIVQMPILFALFATLRGS 116


>gi|67921808|ref|ZP_00515325.1| 60 kDa inner membrane protein [Crocosphaera watsonii WH 8501]
 gi|67856400|gb|EAM51642.1| 60 kDa inner membrane protein [Crocosphaera watsonii WH 8501]
          Length = 378

 Score = 63.5 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 9/108 (8%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFP 535
           G+          +    +    S++I  ++S       + Q  I    P++F      FP
Sbjct: 257 GVTSDDGTINWDILGMILFFGASIYINQELSGSSGGGAQQQQAINKITPLIFSGMFLFFP 316

Query: 536 --AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             AG+++Y   +NV   +Q  V+M+       L D L+    +   ++
Sbjct: 317 LPAGVLMYIVVANVFQTLQTLVLMR-----EPLPDNLQKLLEEQEKAE 359



 Score = 57.3 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY +V ++G AI+  T+ ++L  +PL+  Q  +   M+  Q
Sbjct: 1   MDFGIGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRLGLYPLSAGQIRNMRKMRITQ 60

Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + E +   + +       Q+  +        NPLAGC P++LQ+P+ FA++  +  S
Sbjct: 61  PLMKERQAEIQSRYKDDPAKQQEEMGKLMQQFGNPLAGCLPLVLQMPILFALFATLRGS 119


>gi|157413735|ref|YP_001484601.1| putative inner membrane protein translocase component YidC
           [Prochlorococcus marinus str. MIT 9215]
 gi|157388310|gb|ABV51015.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT
           9215]
          Length = 380

 Score = 63.5 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517
           I  LAA          G + FY+ G ++  I  ++    L++ +   +S    PA+  Q+
Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGAINWDIAALVGAFGLTLLLSQVLSSQGMPANPQQS 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 P++       FP  AG+++Y   +N+    Q  ++ K
Sbjct: 296 TANKITPIMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK 338



 Score = 49.6 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 4/114 (3%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +   K +  ++ +FY LV ++G+AI+  TV +++  FPL+     S   MK  QP + + 
Sbjct: 4   FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKK 63

Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           + + K      P+  Q+ + +L      +PLAGC P+++Q+PV FA++  +  S
Sbjct: 64  QAEIKSKFSGDPKRQQEELGKLMNEFG-SPLAGCLPLIVQMPVLFALFATLRGS 116


>gi|296119231|ref|ZP_06837800.1| putative membrane protein OxaA [Corynebacterium ammoniagenes DSM
           20306]
 gi|295967752|gb|EFG81008.1| putative membrane protein OxaA [Corynebacterium ammoniagenes DSM
           20306]
          Length = 353

 Score = 63.5 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 96/269 (35%), Gaps = 49/269 (18%)

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
            +L   F+     + ++I+L  + V+ L  PL      +      ++P    +       
Sbjct: 5   HLLTHNFFEEQTAWLVSIVLLVLTVRSLIAPLTWMSVKNGRISALLRPTKAAMPAVTTPE 64

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI----SLE---------- 452
             +  ++A+  L+K HN NP  GC P+L+ +PVF  +Y+V+      S E          
Sbjct: 65  EFEANKEAVDALHKEHNFNPAVGCLPLLIMLPVFLGLYQVVLRMARPSFEGSIGFITADE 124

Query: 453 ---MRHA-------PFWG-----WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
               R         P +      W  DLA  DP  +      +P+ +       I   I 
Sbjct: 125 VESFRQTTLNGIRIPAFMSMPESWAVDLAV-DPAMVREK--AMPWLILAISFTVINMCIS 181

Query: 498 SLSMFIQMKMSPPPADKGQAMILNW---MPVVFVFALSSF------PAGLIIYWSWSNV- 547
           +   F     +     K    +  +   + V     L +       P  +I YW  +N+ 
Sbjct: 182 TTRTFWTTNFNT----KLSRRVFIFSLALIVFIPLLLWNIATNGPIPLAVIFYWFCTNLY 237

Query: 548 ---ISIVQQAVIMKMHGAEIGLIDRLRST 573
              ++I+ Q V+   +     L +  R +
Sbjct: 238 TLTLTIICQIVLAVKYPLSPELHEMRRES 266


>gi|256084614|ref|XP_002578522.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial)
           [Schistosoma mansoni]
 gi|238663899|emb|CAZ34760.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial),
           putative [Schistosoma mansoni]
          Length = 304

 Score = 63.1 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 74/211 (35%), Gaps = 27/211 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
             Y+ +     L+   +  +       I  +T+ +++  FP+  +Q    A   NI P++
Sbjct: 97  NSYWPSGWYQSLLETLHVHLDLPWWGAIAASTILIRMCMFPVMVRQRRHLAEYTNIIPQV 156

Query: 397 DELREKFKQSPPQVLQKAMI-------QLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
             L+E   ++        M+       QL K +N+NPL     + LQ P+F  ++  I  
Sbjct: 157 TVLQESLTRARLSGNYVEMMRTSEKMSQLMKNNNLNPLNTFKYVFLQAPIFLGVFTGIRG 216

Query: 450 SLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505
            + +           W  DL A+DP  I     +          + +             
Sbjct: 217 LVNLPVTSLQTGGTAWFTDLTASDPYCILPFLSM---------SLLLLTFETGA------ 261

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPA 536
           ++          +    +PVV    + + P+
Sbjct: 262 ELRSGQTQPTIRVFSRALPVVGFLFVMNMPS 292


>gi|153956096|ref|YP_001396861.1| hypothetical protein CKL_3499 [Clostridium kluyveri DSM 555]
 gi|146348954|gb|EDK35490.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
          Length = 213

 Score = 63.1 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 95/222 (42%), Gaps = 16/222 (7%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              I   +  ++ Y +++ G++GI+I+L T+ V+ +  P++ KQ  S  + + +  K++E
Sbjct: 1   MNIILNVLNTVLGYLFSITGDYGISIILLTLIVRTILLPMSLKQRKSIHHQQVLSKKMEE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           LR K+K +  +   +  ++ Y   N   + GC   LLQ+PV  +++ V +          
Sbjct: 61  LRIKYKHNKDK--LQREMEKYYKQNTKNMFGCLVTLLQLPVISSLFIVFNKMPAQIGTVI 118

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
             WI ++   D   I  +   L    P F+     P +  +      K++          
Sbjct: 119 VPWIVNMKMPDNYFIIPIIYTLVSLSPNFISY--IPFLKIVKEVQVQKINLVVTS----- 171

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560
                 ++ +      P  + IY   + V S+  + VI +++
Sbjct: 172 ------IISMLITFKAPITIGIYLITTGVFSLF-EEVIYRLY 206


>gi|91069870|gb|ABE10801.1| putative inner membrane protein [uncultured Prochlorococcus marinus
           clone ASNC1363]
          Length = 380

 Score = 63.1 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSP--PPADKGQA 517
           I  LAA          G + FY+ G ++  I  ++    L++ +   +S    PA+  Q+
Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGAINWDIAALVGAFGLTLLLSQVLSSQGMPANPQQS 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 PV+       FP  AG+++Y   +N+    Q  ++ K
Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK 338



 Score = 50.0 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 4/114 (3%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +   K +  ++ +FY LV ++G+AI+  TV +++  FPL+     S   MK  QP + + 
Sbjct: 4   FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKR 63

Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           + + K      P+  Q+ + +L      +PLAGC P+++Q+PV FA++  +  S
Sbjct: 64  QAEIKSKFSGDPKKQQEELGKLMNEFG-SPLAGCLPLIVQMPVLFALFATLRGS 116


>gi|146321574|ref|YP_001201285.1| preprotein translocase subunit YidC [Streptococcus suis 98HAH33]
 gi|145692380|gb|ABP92885.1| Preprotein translocase subunit YidC [Streptococcus suis 98HAH33]
          Length = 277

 Score = 63.1 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 82/209 (39%), Gaps = 36/209 (17%)

Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKNIQ 393
           + ++ +PM  L+ +F  +    FG+AI++ T+ V+ +        + K  + +  M  ++
Sbjct: 59  WDWLGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYLK 118

Query: 394 PKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447
           P +  ++E+ K +  Q  Q    +      K + ++ L   GC P+L+Q+P F AIY   
Sbjct: 119 PILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIY--- 175

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
                 RH P       L                  +       I  ++  +  + Q  +
Sbjct: 176 ---FAARHTPGISEATFLG-----------------INLGSTSLILTVVAGILYYAQSLL 215

Query: 508 SPPPADKGQAMILNWMPVV--FVFALSSF 534
                D+ Q   +  M ++   +  + SF
Sbjct: 216 MQVGMDEEQKKQMKTMALMNPIMIMMFSF 244


>gi|126696725|ref|YP_001091611.1| putative inner membrane protein translocase component YidC
           [Prochlorococcus marinus str. MIT 9301]
 gi|126543768|gb|ABO18010.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT
           9301]
          Length = 380

 Score = 63.1 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSP--PPADKGQA 517
           I  LAA          G + FY+ G ++  I  ++    L++ +   +S    PA+  Q+
Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGAINWDIAALVGAFGLTLLLSQVLSSQGMPANPQQS 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 PV+       FP  AG+++Y   +N+    Q  ++ K
Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK 338



 Score = 50.0 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 4/114 (3%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +   K +  ++ +FY LV ++G+AI+  TV +++  FPL+     S   MK  QP + + 
Sbjct: 4   FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKR 63

Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           + + K      P+  Q+ + +L      +PLAGC P+++Q+PV FA++  +  S
Sbjct: 64  QAEIKSKFSGDPKKQQEELGKLMNEFG-SPLAGCLPLIVQMPVLFALFATLRGS 116


>gi|254423008|ref|ZP_05036726.1| 60Kd inner membrane protein [Synechococcus sp. PCC 7335]
 gi|196190497|gb|EDX85461.1| 60Kd inner membrane protein [Synechococcus sp. PCC 7335]
          Length = 434

 Score = 63.1 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 10/100 (10%)

Query: 490 VGIWPIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFP--AGLII 540
           +    I   LS+++  +++       P   +  Q  I  + P++F      FP  AG+++
Sbjct: 271 ILGMIIFFGLSLYVSQQVTNSGNAASPDGQNDQQQAIAKFTPIIFSGMFLFFPLPAGVLM 330

Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           Y   +NV    Q   I+        L   + +   K  +S
Sbjct: 331 YMVIANVFQTAQS-FILSREPLPENLQKLVDAQEKKAASS 369



 Score = 51.9 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 69/121 (57%), Gaps = 6/121 (4%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN-- 391
           +D+G  +     M  ++ +FY +V ++G+AI+  T+ ++   +PL      +   MK   
Sbjct: 1   MDFGIGFLSNNVMLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSIRNMRKMKIAN 60

Query: 392 --IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
             +Q ++ E++E++K  P +  Q+ +  +Y     NPLAGC+P++LQ+P+ FA++  +  
Sbjct: 61  PLMQKRMAEVKERYKDDPVK-QQEEIKDIYSEFG-NPLAGCFPVVLQMPILFALFATLRG 118

Query: 450 S 450
           S
Sbjct: 119 S 119


>gi|170595401|ref|XP_001902368.1| 60Kd inner membrane protein [Brugia malayi]
 gi|158589999|gb|EDP28783.1| 60Kd inner membrane protein [Brugia malayi]
          Length = 322

 Score = 63.1 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 88/253 (34%), Gaps = 26/253 (10%)

Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368
            A  K+F        +  +  +++   W    +    +  +    +N+   + + ++  T
Sbjct: 42  LALVKDFHLFDFLGGNSLVKEYDLFSWWSPASWFRLALEYV---HFNIDLPWWLTVICAT 98

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT------- 421
           + ++LL   +    +   A ++  + +IDE +EK + +         ++  K        
Sbjct: 99  ISLRLLMIFVPIASHRLMARVQLYKKEIDEFKEKMESAQRNGNFLQTMETQKELKDFLKT 158

Query: 422 HNINPLAGCWPILLQIPVF----FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477
            NI        + L   +F     A+ K+  ++          W KDL   DP  +  L 
Sbjct: 159 KNIKLYRQFVFMSLNGAIFMTQFIAVKKMADVAFPGMSTGGLYWFKDLTVPDPYYLLPLV 218

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537
             +       +           +       +   + + Q ++    P++     +   + 
Sbjct: 219 SAITVAAVFKIGAE-----TGGT-------NQGVSPQIQKLLTRIGPIMVFACSTKVSSV 266

Query: 538 LIIYWSWSNVISI 550
           + +YW  SN+IS+
Sbjct: 267 IALYWCTSNMISV 279


>gi|254525383|ref|ZP_05137435.1| inner membrane protein OxaA [Prochlorococcus marinus str. MIT 9202]
 gi|221536807|gb|EEE39260.1| inner membrane protein OxaA [Prochlorococcus marinus str. MIT 9202]
          Length = 380

 Score = 63.1 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517
           I  LAA          G + FY+ G ++  I  ++    L++ +   +S    PA+  Q+
Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGAINWDIAALVGAFGLTLLLSQVLSSQGMPANPQQS 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 P++       FP  AG+++Y   +N+    Q  ++ K
Sbjct: 296 TANKITPIMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK 338



 Score = 49.6 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 4/114 (3%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +   K +  ++ +FY LV ++G+AI+  TV +++  FPL+     S   MK  QP + + 
Sbjct: 4   FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKK 63

Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           + + K      P+  Q+ + +L      +PLAGC P+++Q+PV FA++  +  S
Sbjct: 64  QAEIKSKFSGDPKKQQEELGKLMNEFG-SPLAGCLPLIVQMPVLFALFATLRGS 116


>gi|194477174|ref|YP_002049353.1| putative inner membrane protein translocase component YidC
           [Paulinella chromatophora]
 gi|171192181|gb|ACB43143.1| putative inner membrane protein translocase component YidC
           [Paulinella chromatophora]
          Length = 382

 Score = 63.1 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 6/102 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKGQA 517
           I  LAA          G +  Y  G ++  + +  +   +S+F+   +S    PA+  Q+
Sbjct: 236 IPGLAARSGFLFIKALGQVGLYTEGQVNWDIVVLVLAFGISLFVSQFLSGMGMPANPQQS 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIM 557
                 PV+       FP  AG+++Y   +N+   +Q  ++ 
Sbjct: 296 TANKLTPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFILT 337



 Score = 54.2 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 17/178 (9%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  TV ++L  FPL+     S   M+  QP + + + + 
Sbjct: 8   NLLLPILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67

Query: 404 ---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460
                + PQ  Q+ + +L      +PLAGC P+++Q+P+ FA++  +  S      P+  
Sbjct: 68  KTRYANNPQKQQEELGKLMNEFG-SPLAGCLPLIVQMPILFALFATLRGSP-FADVPYTL 125

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS------------LSMFIQMK 506
            +K L A   T + T     P +          PI  S             S+++Q K
Sbjct: 126 NLKVLNADQITAVETKPFTGPSHSIFISETSHIPISASLPAGTKLGIGEQASIYLQTK 183


>gi|84618151|emb|CAJ20055.1| Cox18Hs1 protein [Homo sapiens]
          Length = 253

 Score = 63.1 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 60/163 (36%), Gaps = 31/163 (19%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFW-------- 459
           + +++ + +LY   N +P      + +Q+P++  +   +   S    H+  +        
Sbjct: 70  KNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLSTGAAHSEGFSVQEQLAT 129

Query: 460 ---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
               W  DL A D T I                + +  + +        K+        Q
Sbjct: 130 GGILWFPDLTAPDSTWIL---------PISVGVINLLIVEICAL----QKIGMSR---FQ 173

Query: 517 AMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             I  +   M V+ +   ++ P+ +++YW  S+ + + Q  ++
Sbjct: 174 TYITYFVRAMSVLMIPIAATVPSSIVLYWLCSSFVGLSQNLLL 216


>gi|195490963|ref|XP_002093362.1| GE20802 [Drosophila yakuba]
 gi|194179463|gb|EDW93074.1| GE20802 [Drosophila yakuba]
          Length = 351

 Score = 63.1 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 69/242 (28%), Gaps = 38/242 (15%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
             G  ++ +  +   +      +        +T    K+     A            +  
Sbjct: 81  YSGLPWWASIVLSTFLLRSVVTLPLTIYQHKITARIEKIALEMPA--IVEELKKEAAMAK 138

Query: 395 KIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
              +  E+  Q   +   K   Q L    N +P+     +  QIP++      +   + M
Sbjct: 139 HKFKWSEQQTQIVYRRSIKKQWQNLIVRDNCHPMKTMIVLWGQIPLWIFQSVALRNLVYM 198

Query: 454 RHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
              P                +GWI +L   D + I           P  + +    II  
Sbjct: 199 LPDPTSIQAQIVTTEMTIGGFGWIPNLTVVDNSYIL----------PVALGLINLAIIEV 248

Query: 499 LSMFIQMKMSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
                   MS          I       + VV V    + P+ L +YW  S+   + Q  
Sbjct: 249 ------QAMSRTRPSTRLQNIANNVFRGLSVVMVPVACTVPSALCVYWVASSSFGLAQNL 302

Query: 555 VI 556
           +I
Sbjct: 303 LI 304


>gi|195012049|ref|XP_001983449.1| GH15574 [Drosophila grimshawi]
 gi|193896931|gb|EDV95797.1| GH15574 [Drosophila grimshawi]
          Length = 352

 Score = 63.1 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 75/260 (28%), Gaps = 34/260 (13%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
             G  ++ A  +   +      +        +T    ++     A            +  
Sbjct: 82  YSGLPWWAAIVLSTFLFRSVVTLPLTIYQHKITARIEQIALEMPA--IVEELKREAAMAK 139

Query: 395 KIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
              +  +K  Q       K   Q L    N +P+     +  QIP++      +   + M
Sbjct: 140 HKFKWSDKQTQIVYSRSIKKQWQNLIVRDNCHPMKTLIVLWGQIPLWIFQSVALRNLVYM 199

Query: 454 RHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
              P                +GWI +L+  D + I           P  + +    II  
Sbjct: 200 LPDPTTLKAQIIATELTIGGFGWIPNLSVVDSSYIL----------PVTLGLINLAIIEV 249

Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-- 556
            +M       P         +   + VV V    + P+ L +YW  S+   + Q  ++  
Sbjct: 250 QAM--TRTRPPTRLQNIFNNVFRGLSVVMVPIACTVPSALCVYWVASSSFGLAQNLLLLS 307

Query: 557 --MKMHGAEIGLIDRLRSTF 574
             M+           L + +
Sbjct: 308 PEMRRAVGIPKTKTELEAPY 327


>gi|126661516|ref|ZP_01732565.1| putative inner membrane protein translocase component YidC
           [Cyanothece sp. CCY0110]
 gi|126617201|gb|EAZ88021.1| putative inner membrane protein translocase component YidC
           [Cyanothece sp. CCY0110]
          Length = 378

 Score = 63.1 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 9/108 (8%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFP 535
           G++         +    +    S++I  ++S       + Q  I    P++F      FP
Sbjct: 257 GVVNDDGTINYDILGMILFFGASIYINQELSGSSGGGAQQQQAINKITPLLFSGMFLFFP 316

Query: 536 --AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             AG+++Y   +NV   +Q  ++M+       L + L+    +   ++
Sbjct: 317 LPAGVLMYIVVANVFQTLQTLILMR-----EPLPENLQKLLEEQEKAE 359



 Score = 57.3 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 66/120 (55%), Gaps = 4/120 (3%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY +V ++G AI+  T+ ++   +PL+  Q  +   M+  Q
Sbjct: 1   MDFGIGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRFGLYPLSAGQIRNMRKMRITQ 60

Query: 394 PKIDELR---EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + E +   ++  +  P   Q+ M +L +    NPLAGC P+LLQ+P+ FA++  +  S
Sbjct: 61  PLMKERQADIQRRYKDDPTKQQEEMGKLMQEFG-NPLAGCLPLLLQMPILFALFATLRGS 119


>gi|221053328|ref|XP_002258038.1| hypothetical protein in Plasmodium species [Plasmodium knowlesi
           strain H]
 gi|193807871|emb|CAQ38575.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
           knowlesi strain H]
          Length = 452

 Score = 63.1 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 30/245 (12%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           ++   +++     +L         ++  +I+ TT F++++  PL           K + P
Sbjct: 163 NYESSWYVELVHELLNCTKIMFDCSWMASIVATTSFMRMVILPLTVSAERDRRKQKILNP 222

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTH---------NINPLAGCWPILLQIPVFFAIYK 445
            I EL  K K +      K  ++  K           ++ P +       Q P+FF  Y 
Sbjct: 223 LIKELTNKLKSNAQDGNIKMALEFKKKILNIRNTHGISLIPKSIIMMAFFQTPLFFIFYF 282

Query: 446 VI---SISLEMRHAPFW---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
            +   +   E+     +    W+  L+  DP  I  L   L       +   I   +   
Sbjct: 283 SMKKMASYPEVFKEFTFESPLWLDSLSLPDPYYILPLLSSLLLLSNNELTALIDKALS-- 340

Query: 500 SMFIQMKMSPPPADKG--QAMI-------LNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
                 K S  P D+   Q  +       +    +   F   S P+GL+IY   +    +
Sbjct: 341 ----NSKSSSLPGDESEFQKKMKHVSKLAMRLFYISSFFFFKSMPSGLLIYLITNTFFQL 396

Query: 551 VQQAV 555
           +   +
Sbjct: 397 LTTQI 401


>gi|123968912|ref|YP_001009770.1| putative inner membrane protein translocase component YidC
           [Prochlorococcus marinus str. AS9601]
 gi|123199022|gb|ABM70663.1| Putative inner membrane protein [Prochlorococcus marinus str.
           AS9601]
          Length = 380

 Score = 62.7 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSP--PPADKGQA 517
           I  LAA          G + FY+ G ++  I  ++    L++ +   +S    PA+  Q+
Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGAVNWDIAALVGAFGLTLLLSQVLSSQGMPANPQQS 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 PV+       FP  AG+++Y   +N+    Q  ++ K
Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK 338



 Score = 50.0 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 4/114 (3%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +   K +  ++ +FY LV ++G+AI+  TV +++  FPL+     S   MK  QP + + 
Sbjct: 4   FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKK 63

Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           + + K      P+  Q+ + +L      +PLAGC P+++Q+PV FA++  +  S
Sbjct: 64  QAEIKSKFSGDPKKQQEELGKLMNEFG-SPLAGCLPLIVQMPVLFALFATLRGS 116


>gi|331225811|ref|XP_003325576.1| hypothetical protein PGTG_07409 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309304566|gb|EFP81157.1| hypothetical protein PGTG_07409 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 461

 Score = 62.7 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 80/282 (28%), Gaps = 40/282 (14%)

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI----DWGWFYFIAK 344
                 TI P  +  T+       +    +        +   E+                
Sbjct: 93  VEKPAETITPITAPETSLSTPVEPQLDQILESTSASQELAALELEHGFLGRCTSGAIENV 152

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE--- 401
              +             + I+     +  +     +    +     ++  KI +++E   
Sbjct: 153 LCTLHDQLALPWFLTIPVVIVGLRTVLIPINVWSMRIGARNMIVKPSLDLKISKIKELQT 212

Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-- 459
           + +Q      Q  +    K     PLA     LLQ  +F + +  +       H P    
Sbjct: 213 RGEQHKALAAQNELRAFMKQEGFRPLAPLGLPLLQGSLFVSFFWALREM-GSHHLPSLTT 271

Query: 460 ---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ----MKMSPPPA 512
               W  DL  A P                       P+I S    +      +M    A
Sbjct: 272 EGALWFTDLTLAGPWYG-------------------LPLIASGLTLLSVETASEMGGLKA 312

Query: 513 DKGQAMILNWMPVVF---VFALSSFPAGLIIYWSWSNVISIV 551
            + Q  ++ ++  V    ++     P+ + +YW  +N+ S++
Sbjct: 313 GQSQ-KVMWFLRAVIVGTLWLFHDLPSAVFLYWCTNNMFSLL 353


>gi|56750083|ref|YP_170784.1| putative inner membrane protein translocase component YidC
           [Synechococcus elongatus PCC 6301]
 gi|81300426|ref|YP_400634.1| putative inner membrane protein translocase component YidC
           [Synechococcus elongatus PCC 7942]
 gi|56685042|dbj|BAD78264.1| preprotein translocase YidC subunit [Synechococcus elongatus PCC
           6301]
 gi|81169307|gb|ABB57647.1| inner membrane protein-like [Synechococcus elongatus PCC 7942]
          Length = 392

 Score = 62.7 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 33/70 (47%), Gaps = 4/70 (5%)

Query: 493 WPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVI 548
             +   +S+++  ++S      +  Q  +    PV+F      FP  AG+++Y   +N+ 
Sbjct: 270 LVLAFGVSLYVSQQLSSQGAAPNPQQDQVNKITPVLFSGMFLFFPLPAGVLMYMVIANIF 329

Query: 549 SIVQQAVIMK 558
             +Q  ++M+
Sbjct: 330 QTLQTFILMR 339



 Score = 55.0 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 71/120 (59%), Gaps = 4/120 (3%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +  +  M  ++ +FY LV ++G+AI+  T+ +++  +PL+     +   M+   
Sbjct: 1   MDFGIGFLSSNVMLPILDFFYGLVPSYGLAIIALTLVIRIALYPLSAGAIRNARRMRIAN 60

Query: 394 PKIDELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + + +++ ++   + P  LQ+   +L+K    NPLAGC+P+LLQ+P+ FA++  +  S
Sbjct: 61  PVMQKRQQEIRERYANDPSKLQEETAKLFKEFG-NPLAGCFPLLLQMPLLFALFATLRGS 119


>gi|22298143|ref|NP_681390.1| putative inner membrane protein translocase component YidC
           [Thermosynechococcus elongatus BP-1]
 gi|38503003|sp|Q8DL96|OXAA_THEEB RecName: Full=Inner membrane protein oxaA
 gi|22294322|dbj|BAC08152.1| tll0600 [Thermosynechococcus elongatus BP-1]
          Length = 401

 Score = 62.7 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 47/121 (38%), Gaps = 16/121 (13%)

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNW 522
           +   D    F   G + +       + +  +   +S+++   +S   +  +  Q  +   
Sbjct: 264 ITLPDGARQFNW-GAIHWD------ILVMILGFGVSLYVNQLLSGQGSSNNPQQQTVNQL 316

Query: 523 MPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            P++F      FP  AG+++Y   +N+   VQ  ++ +       L + L+    +   +
Sbjct: 317 TPIIFSGMFLFFPLPAGVLLYMLIANIFQTVQTFILQR-----EPLPENLQKLVEEQERA 371

Query: 581 Q 581
           +
Sbjct: 372 E 372



 Score = 52.3 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 2/119 (1%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY +V ++G+AI+  T+ V+   +PL+     +   MK +Q
Sbjct: 1   MDFGIGFLSNNVMLPILDFFYGIVPSYGLAIVALTLVVRFAVYPLSAGSIRNMRRMKVVQ 60

Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + +  +  + K       Q+  +        NPLAGC+P+LLQ+P+ FA++  +  S
Sbjct: 61  PIMQKRMQEIQQKYKDNPAEQQKAMAEVYREFGNPLAGCFPLLLQLPILFALFATLRGS 119


>gi|255528515|ref|ZP_05395299.1| 60 kDa inner membrane insertion protein [Clostridium
           carboxidivorans P7]
 gi|255507797|gb|EET84253.1| 60 kDa inner membrane insertion protein [Clostridium
           carboxidivorans P7]
          Length = 217

 Score = 62.7 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 84/214 (39%), Gaps = 17/214 (7%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              I      ++S  +N  G++GI+I+  T+ V+++  P + KQ     N + I  KI +
Sbjct: 1   MNIIFNLFNQILSSIFNFTGDWGISIIFLTILVRIILIPFSIKQKSEMYNQQRISQKIQD 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           ++ K+K +      K     Y+        GC    +Q+P+ F +Y V+           
Sbjct: 61  IKSKYKNNE--KRIKEETIKYEQQLAKSTLGCLVTFIQLPILFTLYNVVMKMPVQVGTII 118

Query: 459 WGWIKDLAAADPTNIFT-LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
             W+  +  +D   +   ++G++        ++  + ++  +      K+S         
Sbjct: 119 LPWVSSIKLSDSYYVVPIIYGLISICPQLITNLDYFKVLKEV------KLSKTN------ 166

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
             L    +  +      P  L +Y+  +++ ++ 
Sbjct: 167 --LIITSIFSILITIKAPIALGLYFITTSLFTLF 198


>gi|254540218|ref|NP_001028482.2| mitochondrial inner membrane protein COX18 isoform 2 [Mus musculus]
 gi|148673382|gb|EDL05329.1| COX18 cytochrome c oxidase assembly homolog (S. cerevisiae),
           isoform CRA_a [Mus musculus]
          Length = 331

 Score = 62.7 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 70/194 (36%), Gaps = 43/194 (22%)

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
                +     +    +   + +  + +++ + +LY   N +P      + +Q+P++   
Sbjct: 122 RLNQEVAVCARQFGWSKRVARLTYLKNMRRLISELYVRDNCHPFKATVLVWVQLPMWV-- 179

Query: 444 YKVISISLEMRH------------------APFWGWIKDLAAADPTNIFTLFGILPFYLP 485
                IS+ +R+                  A    W  DL A D T I            
Sbjct: 180 ----FISVALRNLSTGATHSDGISVQEQLAAGGTLWFPDLTAVDSTWIL---------PV 226

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYW 542
               V +  +     +F   K+      + Q  + N++    V+ +   ++ P+ L++YW
Sbjct: 227 SVGVVNLLIV----EIFALQKI---GTSRFQMYVTNFVRAVSVLMIPVAATVPSALVLYW 279

Query: 543 SWSNVISIVQQAVI 556
             S+++ + Q  ++
Sbjct: 280 LCSSLMGLAQNLLL 293


>gi|186682017|ref|YP_001865213.1| inner membrane protein translocase component YidC [Nostoc
           punctiforme PCC 73102]
 gi|186464469|gb|ACC80270.1| 60 kDa inner membrane insertion protein [Nostoc punctiforme PCC
           73102]
          Length = 383

 Score = 62.3 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 35/105 (33%), Gaps = 6/105 (5%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALSSF 534
           G           +    +   +S+++   +   +    +  Q  +    PV+F      F
Sbjct: 257 GAQDADGTIHWDIVAMIVFFGISLYVSQMLSGQNSSGGNPQQDTVNKITPVIFSGMFLFF 316

Query: 535 P--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
           P  AG+++Y    N+    Q  ++ +       L   + +   + 
Sbjct: 317 PLPAGVLMYMVIGNIFQTAQTYLLSR-EPLPEELQKIVETQEKET 360



 Score = 53.5 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY +V ++G+AI+  T+ V+   +PL+     +   M+ +Q
Sbjct: 1   MDFGIGFLSNNVMLPIIDFFYGIVPSYGLAIVALTLIVRFALYPLSAGSIRNMRKMRIVQ 60

Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + +     K +       Q+  +   +    NPLAGC+P+L+Q+PV  A++  +  S
Sbjct: 61  PLMQKRMAEIKERYKDEPQKQQEEMVNVQKEFGNPLAGCFPLLVQMPVLLALFATLRGS 119


>gi|33863638|ref|NP_895198.1| putative inner membrane protein translocase component YidC
           [Prochlorococcus marinus str. MIT 9313]
 gi|38502916|sp|Q7V610|OXAA_PROMM RecName: Full=Inner membrane protein oxaA
 gi|33635221|emb|CAE21546.1| Putative inner membrane protein; similar to 60 kDa inner membrane
           protein family [Prochlorococcus marinus str. MIT 9313]
          Length = 378

 Score = 62.3 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKG 515
           G I  LAA          G + FY+ G ++  I  ++    L++ +   +S    PA+  
Sbjct: 234 GKIPGLAAQSGFLFIKALGQVGFYVDGEINWDIAILVGGFGLTLLVSQILSGRGLPANPQ 293

Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           Q+      PV+       FP  AG+++Y   +N+    Q  ++ +       L   L   
Sbjct: 294 QSTANKITPVMITGMFLFFPLPAGVLLYMVIANIFQAGQTFLLSR-EALPENLQKILNDQ 352

Query: 574 FSK 576
            SK
Sbjct: 353 LSK 355



 Score = 55.0 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  TV ++L  FPL+     S   M+  QP + + +++ 
Sbjct: 8   NILLPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPAMKKRQDEI 67

Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           K      PQ  Q+ + ++ K    NPL+GC P+L+Q+P+ FA++  +  S
Sbjct: 68  KSRYAKDPQKQQEELGKVMKEFG-NPLSGCLPLLVQMPILFALFATLRGS 116


>gi|124022319|ref|YP_001016626.1| inner membrane protein translocase component YidC [Prochlorococcus
           marinus str. MIT 9303]
 gi|123962605|gb|ABM77361.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT
           9303]
          Length = 377

 Score = 62.3 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 8/126 (6%)

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKG 515
           G I  LAA          G + FY+ G ++  I  ++    L++ +   +S    PA+  
Sbjct: 234 GKIPGLAAQSGFLFIKALGQVGFYVDGEINWDIAILVGGFGLTLLVSQILSGRGLPANPQ 293

Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           Q+      PV+       FP  AG+++Y   +N+    Q  ++ +   A    + ++ + 
Sbjct: 294 QSTANKITPVMITGMFLFFPLPAGVLLYMVIANIFQAGQTFLLSR--EALPENLQKILNE 351

Query: 574 FSKNYN 579
                 
Sbjct: 352 QQSKPA 357



 Score = 54.6 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  TV ++L  FPL+     S   M+  QP + + +++ 
Sbjct: 8   NILLPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPAMKKRQDEI 67

Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           K      PQ  Q+ + ++ K    NPL+GC P+L+Q+P+ FA++  +  S
Sbjct: 68  KSRYAKDPQKQQEELGKVMKEFG-NPLSGCLPLLVQMPILFALFATLRGS 116


>gi|300855851|ref|YP_003780835.1| hypothetical protein CLJU_c26750 [Clostridium ljungdahlii DSM
           13528]
 gi|300435966|gb|ADK15733.1| putative membrane protein [Clostridium ljungdahlii DSM 13528]
          Length = 213

 Score = 62.3 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 95/214 (44%), Gaps = 17/214 (7%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              I   +  L+++ +N  G++GIA+++ T+ VK+L  P++ KQ  S    + +  K+++
Sbjct: 1   MNIIFNLLGALLNHVFNFTGDWGIAVVVLTLIVKVLLMPMSMKQRFSILKQQKVAKKMED 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           ++ ++K    ++ +K +   YK  N+  + GC   ++Q+P+   +YK I     +     
Sbjct: 61  IKIRYKNDKLKM-EKEIQNCYKD-NLKSMMGCLLTIIQLPIIGGLYKTIINMPVVSGTVL 118

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
             W+  +  +D   I  +   +   LPG ++   +  +     +                
Sbjct: 119 IPWVASIKLSDSYFIVPIMYSIISMLPGLVNSIDYFKVYREVQY--------------NK 164

Query: 519 ILNWMPVVF-VFALSSFPAGLIIYWSWSNVISIV 551
           +   +P V  +      P  L +Y+  S+V S+V
Sbjct: 165 MSAILPGVIGLLITIKAPIALGLYFITSSVFSLV 198


>gi|256392377|ref|YP_003113941.1| hypothetical protein Caci_3193 [Catenulispora acidiphila DSM 44928]
 gi|256358603|gb|ACU72100.1| 60 kDa inner membrane insertion protein [Catenulispora acidiphila
           DSM 44928]
          Length = 243

 Score = 62.3 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 84/247 (34%), Gaps = 24/247 (9%)

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP---LAKKQY 383
           +P   +L       + A     ++           +AI++ T  V+L   P         
Sbjct: 1   MPFSSLLTPAIVAAYHAVTGLSVLLVPVLGGLGPAVAIVMFTAAVRLCLHPLNRAQMNSQ 60

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
           +++   +       +  ++  +  P   Q+  ++LY+ + +    G    L+QIPVFF +
Sbjct: 61  LASQEQRTALAPAVQKLQRKYKKDPARAQRETLELYRANGVKLAPGIGLGLVQIPVFFVV 120

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF--------GILPFYLPGFMHVGIWPI 495
           Y++         +P  G   +   +D      L         G         +   +   
Sbjct: 121 YRLFV-------SPTIGGHHNGLLSDQLFGVGLGSHFRDAFSGSSALLGHVAVFAVLIAA 173

Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           +  L+ +   +M         A ++  MP + V +    P    +Y + + + ++V+   
Sbjct: 174 LAVLATWSSRRM--RAGAAATAKLMALMPYLTVLSAVVLPLASGLYAATTTLWTLVE--- 228

Query: 556 IMKMHGA 562
             +    
Sbjct: 229 -RRRMTV 234


>gi|254540220|ref|NP_001156928.1| mitochondrial inner membrane protein COX18 isoform 1 [Mus musculus]
 gi|148673384|gb|EDL05331.1| COX18 cytochrome c oxidase assembly homolog (S. cerevisiae),
           isoform CRA_c [Mus musculus]
          Length = 332

 Score = 62.3 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 70/195 (35%), Gaps = 44/195 (22%)

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
                +     +    +   + +  + +++ + +LY   N +P      + +Q+P++   
Sbjct: 122 RLNQEVAVCARQFGWSKRVARLTYLKNMRRLISELYVRDNCHPFKATVLVWVQLPMWV-- 179

Query: 444 YKVISISLEMRH-------------------APFWGWIKDLAAADPTNIFTLFGILPFYL 484
                IS+ +R+                   A    W  DL A D T I           
Sbjct: 180 ----FISVALRNLSTGATHSDAGISVQEQLAAGGTLWFPDLTAVDSTWIL---------P 226

Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIY 541
                V +  +     +F   K+      + Q  + N++    V+ +   ++ P+ L++Y
Sbjct: 227 VSVGVVNLLIV----EIFALQKI---GTSRFQMYVTNFVRAVSVLMIPVAATVPSALVLY 279

Query: 542 WSWSNVISIVQQAVI 556
           W  S+++ + Q  ++
Sbjct: 280 WLCSSLMGLAQNLLL 294


>gi|83305207|sp|Q8VC74|COX18_MOUSE RecName: Full=Mitochondrial inner membrane protein COX18; Flags:
           Precursor
 gi|74217643|dbj|BAE33563.1| unnamed protein product [Mus musculus]
 gi|148877831|gb|AAI45729.1| COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) [Mus
           musculus]
 gi|187957590|gb|AAI38973.1| COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) [Mus
           musculus]
          Length = 331

 Score = 61.9 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 70/194 (36%), Gaps = 43/194 (22%)

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
                +     +    +   + +  + +++ + +LY   N +P      + +Q+P++   
Sbjct: 122 RLNQEVAVCARQFGWSKRVARLTYLKNMRRLVSELYVRDNCHPFKATVLVWVQLPMWV-- 179

Query: 444 YKVISISLEMRH------------------APFWGWIKDLAAADPTNIFTLFGILPFYLP 485
                IS+ +R+                  A    W  DL A D T I            
Sbjct: 180 ----FISVALRNLSTGATHSDGISVQEQLAAGGTLWFPDLTAVDSTWIL---------PV 226

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYW 542
               V +  +     +F   K+      + Q  + N++    V+ +   ++ P+ L++YW
Sbjct: 227 SVGVVNLLIV----EIFALQKI---GTSRFQMHVTNFVRAVSVLMIPVAATVPSALVLYW 279

Query: 543 SWSNVISIVQQAVI 556
             S+++ + Q  ++
Sbjct: 280 LCSSLMGLAQNLLL 293


>gi|289807605|ref|ZP_06538234.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           AG3]
          Length = 157

 Score = 61.9 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 38/130 (29%), Gaps = 8/130 (6%)

Query: 64  ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE 123
           A      + +K   L  +IN +G   +   L  Y  ++ SN P   L   +  +  Y A+
Sbjct: 30  ASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIYQAQ 87

Query: 124 LDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EH 177
                        N       +               + + + +A    F +T       
Sbjct: 88  SGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFKRGD 147

Query: 178 YLFKIVDTVT 187
           Y   +  +V 
Sbjct: 148 YAVNVNYSVQ 157


>gi|321311061|ref|YP_004193390.1| membrane protein OxaA [Mycoplasma haemofelis str. Langford 1]
 gi|319802905|emb|CBY93551.1| membrane protein OxaA [Mycoplasma haemofelis str. Langford 1]
          Length = 379

 Score = 61.9 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 94/301 (31%), Gaps = 18/301 (5%)

Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
           +   Y  D     +  F  ++     G               +   +             
Sbjct: 57  TYTNYHPDPGVGLEFGFLPSDNGTGTGDVKFDLGSWSIAGPRYHAFYRPTWIYGPFLSWF 116

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           +    + +      F               ++++   F++ + F    +  +        
Sbjct: 117 VYPVAYVFMNLMWFFHKFPELEENGLYVIFSMLIIMFFMRFVTFWTTLRSSIYQEKQLLH 176

Query: 393 QPKIDELREKFKQSPPQ------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
           Q  ID +  K+ +             + +   YK HN+ PLA      +  PVF  ++KV
Sbjct: 177 QSAIDAISSKYDKYDITDKQARLKKHQELSAYYKKHNLKPLAILENFFINTPVFLIVFKV 236

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS--LSMFIQ 504
           I+I   ++       I DL+    T IF  F    +       + I     S   S+++ 
Sbjct: 237 ITICRPIKF-TVLLNIWDLSKTPLTTIFDDFLNEGWMYLVLCLIIIPTNFFSQKTSIWLS 295

Query: 505 M------KMSPPPADKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
                  K +    +        I   M  VF+     +  GL IY+ +++V +I Q  +
Sbjct: 296 QARHPSLKKNIVDKNSQTYKMQRIQKVMTFVFLLFTFFWSTGLAIYYFFNSVFTIFQNLI 355

Query: 556 I 556
           I
Sbjct: 356 I 356


>gi|75909641|ref|YP_323937.1| putative inner membrane protein translocase component YidC
           [Anabaena variabilis ATCC 29413]
 gi|75703366|gb|ABA23042.1| 60 kDa inner membrane insertion protein [Anabaena variabilis ATCC
           29413]
          Length = 380

 Score = 61.9 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 39/109 (35%), Gaps = 7/109 (6%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALSSF 534
           G +         +    +   +S++    +   +    +  Q  +    PV+F      F
Sbjct: 257 GAIDPDNTIHWDIVGMIVFFGISLYFSQMLSGQNSSGGNPQQDTVNKITPVIFSGMFLFF 316

Query: 535 P--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           P  AG+++Y    NV   +Q  ++ +        I ++  T  K   ++
Sbjct: 317 PLPAGVLMYMVIGNVFQTLQTYILSR--EPLPEEIQKIVETQEKQAQAE 363



 Score = 54.6 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 4/120 (3%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY++V ++G+AI+  T+ ++   +PL+  Q  +   M+ +Q
Sbjct: 1   MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQ 60

Query: 394 PKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + +   +     +  PQ  Q+ M+ + K    NPLAGC P+LLQ+PV  A++  +  S
Sbjct: 61  PLMQKRMAEIKERYKDDPQKQQEEMMNVQKEFG-NPLAGCLPLLLQMPVLLALFATLRGS 119


>gi|297292746|ref|XP_001104459.2| PREDICTED: mitochondrial inner membrane protein COX18-like [Macaca
           mulatta]
          Length = 334

 Score = 61.9 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 76/244 (31%), Gaps = 53/244 (21%)

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+         +  +I+L+TV ++                         +   +      
Sbjct: 71  LLGVQATTGLPWWGSILLSTVALRGAVTLPLAAYQHYILAKVENLQPEIKAIARHLNQEV 130

Query: 409 -------------------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
                              + +++ + +LY   N +P      + +Q+P++  +   +  
Sbjct: 131 VVRANQLGWSERVARLTYLKNMKRIISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRN 190

Query: 450 -SLEMRHA------------PFWGWIKDLAAADPTNIFTL----FGILPFYLPGFMHVGI 492
            S    H+                W  DL A D T I  +      +L   +    ++GI
Sbjct: 191 LSTGAAHSEAGFSVQEQLATGGILWFPDLTAPDSTWILPISVGVINLLIVEISALQNIGI 250

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
             +    + F+                   M V+ +   ++ P+ +++YW  S+ + + Q
Sbjct: 251 SRLQTYATYFV-----------------RAMSVLMIPVAATVPSSIVLYWLCSSFMGLSQ 293

Query: 553 QAVI 556
             ++
Sbjct: 294 NLLL 297


>gi|291234764|ref|XP_002737317.1| PREDICTED: CG4942-like [Saccoglossus kowalevskii]
          Length = 333

 Score = 61.9 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 79/248 (31%), Gaps = 40/248 (16%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
            E   D+    + A  +    +    +   F +        ++LL   +A+        +
Sbjct: 65  LETGHDFTNLPWWASIILTTFALRTAVTLPFAVYQHYIFARLELLQPQIAQYGRQLQVYV 124

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           K  +   +  + K +      ++K +  LY   NI+P      + +Q+P++  I   +  
Sbjct: 125 KQKEVDENWGKNKSRVYFKMQMKKVVTALYIRDNIHPFKASLLLWVQLPMWVFISFALRN 184

Query: 450 S---------------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
                           +         W  DL   DP                     I P
Sbjct: 185 MTGAFPGKVAQEFGPLVPSMATEGALWFPDLTLPDPF-------------------VILP 225

Query: 495 IIMSLSMFI---QMKMSPPPADKGQAMI---LNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
           II+ LS  +      +      K Q  I     +  V  V   +  P G+ +YW+ S+V 
Sbjct: 226 IILGLSNLLVIEMHALRSTKPTKWQGRITNLFRFFSVAMVPLAAYLPTGMSLYWASSSVY 285

Query: 549 SIVQQAVI 556
            + Q  ++
Sbjct: 286 GLGQNLLL 293


>gi|156052557|ref|XP_001592205.1| hypothetical protein SS1G_06444 [Sclerotinia sclerotiorum 1980]
 gi|154704224|gb|EDO03963.1| hypothetical protein SS1G_06444 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 565

 Score = 61.9 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 92/320 (28%), Gaps = 53/320 (16%)

Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF--P 316
           ++        +  +   +  +       A  +   +        T+T        +    
Sbjct: 144 FSQSITRPAPSKANILIRNATSIRFASTAPSAIPPVDSPIPSIETSTPEFKPTPLDVTAD 203

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV-KLLF 375
                        +   +   + +     M  ++ + + L G      +       +++ 
Sbjct: 204 INPDILSAPEHIGYLHSLGLDYGWGPTAIMEWMLEHIHVLAGTPWWVSIGIAAAAWRVIL 263

Query: 376 FPLAKKQYVSTANMK-------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428
           F        + + M         +Q ++ + R +   +     +  + ++YK   I+   
Sbjct: 264 FKPYLDAAENASRMATIKEFTAPVQAQMMQARTRGDTTEMMFHRAELQRIYKRAGISMWK 323

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW----------GWIKDLAAADPTNIFTLFG 478
              P+ +QI + +  +K+      +R                W  +L   DP        
Sbjct: 324 SFVPM-VQIFIGYGTWKL------LRQMSDIPVPGLLDGGVLWFYNLTIPDPYY------ 370

Query: 479 ILPFYLPGFMHVGIWPII-----MSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALS 532
           +LP      +H     ++       +S              G   ++ W MP + +   S
Sbjct: 371 LLPLATSAILHF----VLKKGGETGVSTLT----------PGMLYMMQWGMPALSMVFTS 416

Query: 533 SFPAGLIIYWSWSNVISIVQ 552
             PA +   +  S+ IS  Q
Sbjct: 417 FMPAAVQFSFLMSSSISFGQ 436


>gi|309805164|ref|ZP_07699216.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LactinV 09V1-c]
 gi|308165398|gb|EFO67629.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners
           LactinV 09V1-c]
          Length = 207

 Score = 61.9 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 70/187 (37%), Gaps = 31/187 (16%)

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
            K   +    L +  +++YK +N++ +   GC P+L+Q+P+   IY+ ++ S  +  + F
Sbjct: 1   MKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIMIGIYQAVAYSKTLASSSF 60

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
            G                   +    P  +   +  I+      IQ  +S     + Q  
Sbjct: 61  MG-------------------ISLSKPSIVFAVVAAILY----LIQGYLSLIGISEQQKQ 97

Query: 519 ILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574
            +       P++ +     +   L +Y+    ++ ++QQ +   +      +   +    
Sbjct: 98  TMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIATFILM--PKVRADVDKEL 155

Query: 575 SKNYNSQ 581
           +K+   +
Sbjct: 156 TKHPIKE 162


>gi|195326213|ref|XP_002029824.1| GM25116 [Drosophila sechellia]
 gi|194118767|gb|EDW40810.1| GM25116 [Drosophila sechellia]
          Length = 351

 Score = 61.9 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 70/242 (28%), Gaps = 38/242 (15%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
             G  ++ +  +  ++      +        +T    K+     A            +  
Sbjct: 81  YSGLPWWASIVLSTVLFRSVVTLPLTIYQHKITARIEKIALEMPA--IVEELKKEAAMAK 138

Query: 395 KIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
              +  EK  Q   +   K   Q L    N +P+     +  QIP++      +   + M
Sbjct: 139 HKFKWSEKQTQIVYRRSIKKQWQNLIVRDNCHPMKTMIVLWGQIPLWIFQSVALRNLVYM 198

Query: 454 RHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
              P                +GWI +L   D + I           P  + +    II  
Sbjct: 199 LPDPTSIQAQIVTTEMTVGGFGWIPNLTVVDHSYIL----------PVALGLINLAIIEV 248

Query: 499 LSMFIQMKMSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
                   MS          I       + VV V    + P+ + +YW  S+   + Q  
Sbjct: 249 ------QAMSRTRPSTRLQNIANNVFRGLSVVIVPVACTVPSAICVYWVASSSFGLAQNL 302

Query: 555 VI 556
           +I
Sbjct: 303 LI 304


>gi|219519411|gb|AAI45480.1| Cox18 protein [Mus musculus]
          Length = 332

 Score = 61.5 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 70/195 (35%), Gaps = 44/195 (22%)

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
                +     +    +   + +  + +++ + +LY   N +P      + +Q+P++   
Sbjct: 122 RLNQEVAVCARQFGWSKRVARLTYLKNMRRLVSELYVRDNCHPFKATVLVWVQLPMWV-- 179

Query: 444 YKVISISLEMRH-------------------APFWGWIKDLAAADPTNIFTLFGILPFYL 484
                IS+ +R+                   A    W  DL A D T I           
Sbjct: 180 ----FISVALRNLSTGATHSDAGISVQEQLAAGGTLWFPDLTAVDSTWIL---------P 226

Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIY 541
                V +  +     +F   K+      + Q  + N++    V+ +   ++ P+ L++Y
Sbjct: 227 VSVGVVNLLIV----EIFALQKI---GTSRFQMHVTNFVRAVSVLMIPVAATVPSALVLY 279

Query: 542 WSWSNVISIVQQAVI 556
           W  S+++ + Q  ++
Sbjct: 280 WLCSSLMGLAQNLLL 294


>gi|322783219|gb|EFZ10805.1| hypothetical protein SINV_06351 [Solenopsis invicta]
          Length = 421

 Score = 61.5 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 85/281 (30%), Gaps = 33/281 (11%)

Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362
           ++  +         +I    +     +F  +          K +   +   ++  G    
Sbjct: 102 SSQYYNSVRYLSNASIDSIAETQVPMQFSGIFKVISESAPIKVVQDYLLLVHDYTGLPWW 161

Query: 363 AIMLTTVFVKLLFFPL-------------------AKKQYVSTANMKNIQPKIDELREKF 403
           ++++ T  +      L                     +         N         +K+
Sbjct: 162 SVIMLTTIIMRTTVTLPLSLYQLYIFGKLENLKTEMDEIVKEMKKEINYGTHKYNWSKKY 221

Query: 404 KQSPPQVLQKAMI-QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
                    K    +L    N +PL     +L+QIP++ ++      S+ +R+  +    
Sbjct: 222 ATRLYNHSVKKQWNKLIVRENCHPLKASLLVLVQIPMWISL------SMSIRNLCYMLPK 275

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522
           +D +A       T  G L           + P+ M L     ++++     K       +
Sbjct: 276 QDSSAYAIYQELTTDGFLWLSNLTIPDPFVLPLAMGLFNLAIIEITCMSKVKELTKWQRY 335

Query: 523 MP-------VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +        +  +    S P+ L +YW+ S+   + Q  ++
Sbjct: 336 LTHFFRVVAIGMIPVAMSVPSCLSLYWATSSAFGLFQNLIL 376


>gi|296196355|ref|XP_002745786.1| PREDICTED: mitochondrial inner membrane protein COX18-like
           [Callithrix jacchus]
          Length = 334

 Score = 61.5 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 72/243 (29%), Gaps = 51/243 (20%)

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408
           L+         +   I+L+TV ++                         +   K      
Sbjct: 71  LLGVHATTGLPWWGGILLSTVALRGAVTLPLAAYQHYILAKVENLQPEIKTIAKHLNQEV 130

Query: 409 -------------------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
                              + +++ + ++Y   N +P      + +QIPV+  +   +  
Sbjct: 131 AVRASQLGWSKRVARLTYLKNMRRLVSEVYVRDNCHPFKATVLVWIQIPVWVFMSVALRN 190

Query: 450 S-------------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
                          E        W  DL A D T I                + +  + 
Sbjct: 191 FSTGATHSEAGFSVPEQLATGGILWFPDLTAPDSTWIL---------PISVGVINLLIV- 240

Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
               ++   K+        Q  I  ++    V+ +   ++ P+ L++YW  S+++ + Q 
Sbjct: 241 ---EIYALQKIGMSR---FQTYITYFVRAVSVLMIPIAAAMPSSLVLYWLCSSLMGLSQN 294

Query: 554 AVI 556
            ++
Sbjct: 295 LLL 297


>gi|302698045|ref|XP_003038701.1| hypothetical protein SCHCODRAFT_231532 [Schizophyllum commune H4-8]
 gi|300112398|gb|EFJ03799.1| hypothetical protein SCHCODRAFT_231532 [Schizophyllum commune H4-8]
          Length = 423

 Score = 61.5 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 86/232 (37%), Gaps = 23/232 (9%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
            +    +Y  A  +   +  F   L   +   I++ T+  ++  FP   +   +   M+ 
Sbjct: 160 AMGLTAWYTPAGLVRWTLQVFNVTLGLPWFWTIVVGTLLWRVSMFPFHLQSIRNGQKMRK 219

Query: 392 IQPKIDELREKFKQSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPV----F 440
           + P++ ++R++  ++         Q     M QL   +++NPL    P  + +P     F
Sbjct: 220 VNPEMQKIRDEINEAKKTQDVLALQRGIMKMQQLNAKYDVNPLKLMAPGFINLPFTLGLF 279

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
           F + ++     ++     +  + DL   DP  I  +F +L   L          I     
Sbjct: 280 FGVKRLCEEVPQLA-VSGFSLLPDLTVTDPYWILPMFSVLLIQLQIRASAADGSI----- 333

Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
                 ++  PA      I+    +V +  L+    G+++     ++   +Q
Sbjct: 334 -----DLTTSPAMPHVMNIMRLFSIVTIPLLAKLHIGVLVSLVTQSLFMTLQ 380


>gi|218437889|ref|YP_002376218.1| inner membrane protein translocase component YidC [Cyanothece sp.
           PCC 7424]
 gi|218170617|gb|ACK69350.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 7424]
          Length = 381

 Score = 61.5 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/120 (30%), Positives = 68/120 (56%), Gaps = 4/120 (3%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY +V ++G AI+  T+ ++   +PL+  Q  +   M+  Q
Sbjct: 1   MDFGVGFISTNIMLPILDFFYRIVPSYGFAIIALTLVIRFALYPLSAGQIRNMRKMRITQ 60

Query: 394 PKIDELRE---KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + E +E   K  ++ PQ  Q+ M +L +    NPLAGC P+L+Q+P+ FA++  +  S
Sbjct: 61  PLMKERQEEIQKRYKNDPQKQQEEMGKLMQEFG-NPLAGCLPLLVQMPILFALFATLRGS 119



 Score = 60.8 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 43/110 (39%), Gaps = 11/110 (10%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP----PADKGQAMILNWMPVVFVFALSS 533
           G +         +    +   +S++I  ++S         + Q  +    PV+F      
Sbjct: 257 GAVSDDGKIHWDILGMVLFFGISIYINQELSGSKSGGANAQQQQAVNKITPVIFSGMFLF 316

Query: 534 FP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           FP  AG+++Y   +N+   +Q  ++M+       L + L+    +   ++
Sbjct: 317 FPLPAGVLMYIVVANIFQTIQTVILMR-----EPLPENLQKLLEQQEKTE 361


>gi|298709029|emb|CBJ30979.1| Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus
           siliculosus]
          Length = 342

 Score = 61.5 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/168 (29%), Positives = 70/168 (41%), Gaps = 17/168 (10%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
            +FG+AI+  T+ VK L  PL   Q  S+  MK +QP + E+  KF Q+       A  +
Sbjct: 129 QSFGLAIVTFTLGVKTLLVPLQAIQLQSSEKMKVLQPTVKEINAKFGQNKE-AATAATNR 187

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAAADPTNIFTL 476
           LY    +NPL GC P LLQ PVF  +Y+ I        A   + W+  L        F  
Sbjct: 188 LYAETKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVASEGFLWLPSLQGP----TFEN 243

Query: 477 FGILPFYLPGFMHVGIW-----------PIIMSLSMFIQMKMSPPPAD 513
              + +         I            P I+ LS  + M +  PP D
Sbjct: 244 GRGIGWLTTFVDGHPILGWHDTLCYMSIPAILVLSQKLSMTLLTPPDD 291


>gi|154483919|ref|ZP_02026367.1| hypothetical protein EUBVEN_01625 [Eubacterium ventriosum ATCC
           27560]
 gi|149735410|gb|EDM51296.1| hypothetical protein EUBVEN_01625 [Eubacterium ventriosum ATCC
           27560]
          Length = 365

 Score = 61.5 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 13/85 (15%)

Query: 486 GFMHVGIWPIIMSLSMFI----QMKMSPP---------PADKGQAMILNWMPVVFVFALS 532
             +   I PI+  L   +      K++           P       +   MP++ V+   
Sbjct: 188 TIVVALIIPILAGLFQLLSVQLTTKINSAASSANMADNPMAGSMKAMNIMMPLMSVYMCW 247

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIM 557
              AG+ +YW   +++ I+QQ  I 
Sbjct: 248 ILSAGIGLYWMAGSLVMILQQIFIN 272



 Score = 42.3 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA 428
           +L  P+  KQ   T     + P+I E+++K+K    Q     +Q+ +  +Y  +  +P  
Sbjct: 1   MLMLPMTIKQQKFTKLNAAMNPEIQEIQKKYKDKKNQQSQLAMQEEIKSVYDKYGTSPTG 60

Query: 429 GCWPILLQIPVFFAIYKVISI 449
            C  +++Q+P+ FA+Y+VI  
Sbjct: 61  SCLQLIIQMPILFALYRVIMN 81


>gi|172036279|ref|YP_001802780.1| putative inner membrane protein translocase component YidC
           [Cyanothece sp. ATCC 51142]
 gi|171697733|gb|ACB50714.1| putative 60 kD inner membrane insertion protein [Cyanothece sp.
           ATCC 51142]
          Length = 378

 Score = 61.5 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 9/108 (8%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFP 535
           G++         +    +    S++I  ++S       + Q  I    P++F      FP
Sbjct: 257 GVVNDDGTINYDILGMILFFGASIYINQELSGSSGGGAQQQQAINKITPLLFSGMFLFFP 316

Query: 536 --AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             AG+++Y   +NV   +Q  V+M+       L + L+    +   ++
Sbjct: 317 LPAGVLMYIVVANVFQTLQTLVLMR-----EPLPENLQKLLEEQEKTE 359



 Score = 57.7 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY +V ++G AI+  T+ ++   +PL+  Q  +   M+  Q
Sbjct: 1   MDFGIGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRFGLYPLSAGQIRNMRKMRITQ 60

Query: 394 PKIDELREKFKQS--PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + E + + ++        Q+  +        NPLAGC P+LLQ+P+ FA++  +  S
Sbjct: 61  PLMKERQAEIQRRYKDDPTKQQEEMGKLMQEFGNPLAGCLPLLLQMPILFALFATLRGS 119


>gi|213407700|ref|XP_002174621.1| inner membrane protein cox18 [Schizosaccharomyces japonicus yFS275]
 gi|212002668|gb|EEB08328.1| inner membrane protein cox18 [Schizosaccharomyces japonicus yFS275]
          Length = 212

 Score = 61.2 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 69/231 (29%), Gaps = 43/231 (18%)

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
           +    + + I    + ++                 + +Q       ++ +      +++ 
Sbjct: 9   HSFLPWSVGIPAFAICLRTCITLPIAIASKRR-RERLLQIHSLLTSKRNQLVSKDAIKQE 67

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF----WGWIKDLAAADP 470
             +LY     +P       + QIP F      +   + M  +        W ++L   DP
Sbjct: 68  KRRLYSEFRCSPWPLLLLPMAQIPCFAYATLKLRRLVRMAPSSMTTEGAFWFQNLLEPDP 127

Query: 471 TNIFTLFGILPFYLPGFMH------------VGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
           T + T+   L +     +               I  I+ S +M     +S          
Sbjct: 128 TGLLTVSLGLAYMTNAAIVHRRQQFSGLSKGTFIASILSSFAMIYVASLS---------- 177

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
                           P+ + +YWS S + S +Q A++ +         D+
Sbjct: 178 ----------------PSAMTLYWSTSALYSTIQNALLYRNDTPSEPAKDK 212


>gi|123966591|ref|YP_001011672.1| putative inner membrane protein translocase component YidC
           [Prochlorococcus marinus str. MIT 9515]
 gi|123200957|gb|ABM72565.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT
           9515]
          Length = 379

 Score = 61.2 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 7/124 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSP--PPADKGQA 517
           I  LAA          G + FY+ G ++  I  ++    L++ +   +S    P++  Q+
Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGSINWDIATLVGAFGLTLLLSQVLSSQGMPSNAQQS 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575
                 PV+       FP  AG+++Y   +N+    Q  ++ K       L   L     
Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK-EALPSNLQKILDEQLI 354

Query: 576 KNYN 579
               
Sbjct: 355 NKNK 358



 Score = 50.0 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 4/114 (3%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +   K +  ++ +FY LV ++G+AI+  TV +++  FPL+     S   MK  QP + + 
Sbjct: 4   FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKR 63

Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           + + K      P+  Q+ + +L      +PLAGC P+++Q+PV FA++  +  S
Sbjct: 64  QAEIKSKFSGDPKKQQEELGKLMNEFG-SPLAGCLPLIVQMPVLFALFATLRGS 116


>gi|313900860|ref|ZP_07834350.1| putative stage III sporulation protein J [Clostridium sp. HGF2]
 gi|312954280|gb|EFR35958.1| putative stage III sporulation protein J [Clostridium sp. HGF2]
          Length = 331

 Score = 61.2 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 97/251 (38%), Gaps = 27/251 (10%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F   +D GWF  +       +  F     + GI I+  T  ++LL F  + K  V++  M
Sbjct: 81  FSDAMDEGWFNGLIVWPIAFLINFVADFSDAGIGIIAATFLIQLLIFLFSIKSQVASQRM 140

Query: 390 KNIQPKIDELREKF----KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           ++IQP++++++ K+             + M  LY  + INP        +Q PV   +Y+
Sbjct: 141 QSIQPEMNKIQAKYAGKTDDRSKMQQAQEMQALYSKYKINPFGTLLVTFIQFPVILGMYQ 200

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS-MFIQ 504
               +  +    F G   +L A  P   F L     +Y+  F+ +  + ++      ++Q
Sbjct: 201 ATMRAYSVVTGSFQG--INL-AKTPIEGFNLGDY--WYIVIFVLMVAFQLLSFKMPQWLQ 255

Query: 505 -----------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
                             K           M++     +      ++P G+  YW  +++
Sbjct: 256 EHRKKKMHVKEKKYAEPKKKGGNGMMGSMNMMMYMSTGMIAIFAINWPLGMSFYWLVNSL 315

Query: 548 ISIVQQAVIMK 558
             ++Q  VI K
Sbjct: 316 ARVIQNIVIHK 326


>gi|125980279|ref|XP_001354164.1| GA18542 [Drosophila pseudoobscura pseudoobscura]
 gi|54642468|gb|EAL31216.1| GA18542 [Drosophila pseudoobscura pseudoobscura]
          Length = 350

 Score = 61.2 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 91/313 (29%), Gaps = 43/313 (13%)

Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323
           I +  T+ + +    +    R  A   A   ++    S     F    +   P  +  + 
Sbjct: 15  IAATYTNGYLRASTPNGTPDRRLASTEAAAASVQLANSGDLVGFWQTLSNSTPVAYMQDA 74

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
            + I  +  L  W            +++    +  +   A +                  
Sbjct: 75  LIQIHDYSNLPWWSSIVLSTFLFRGVITLPLTIYQHKITARIERIALEMPALV------- 127

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFA 442
                   +  +  +  +K      +   K   Q L    N +P+     +  QIP++  
Sbjct: 128 EELKREAAMARQKFKWSDKETSIVYRRSIKKQWQNLIVRDNCHPMKTIIVLWGQIPLWIF 187

Query: 443 IYKVISISLEMRHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGF 487
               +   + M   P                +GWI +L   D + I  +         G 
Sbjct: 188 QSVALRNLVYMLPDPTTLQAQITATEMTIGGFGWIPNLTVVDSSYILPV-------TLGL 240

Query: 488 MHVGIWPIIMSLSMFIQMKMS----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
           +++GI  +           M+    P         +   + VV V    + P+ L +YW 
Sbjct: 241 LNLGIIEL---------QAMTRTRPPTRLQSIANHVFRGLSVVMVPVACTVPSALCVYWV 291

Query: 544 WSNVISIVQQAVI 556
            S+   + Q  ++
Sbjct: 292 ASSTFGLAQNMLL 304


>gi|298490101|ref|YP_003720278.1| YidC/Oxa1 family lipolytic protein ['Nostoc azollae' 0708]
 gi|298232019|gb|ADI63155.1| membrane protein insertase, YidC/Oxa1 family ['Nostoc azollae'
           0708]
          Length = 383

 Score = 61.2 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 35/96 (36%), Gaps = 6/96 (6%)

Query: 490 VGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALSSFP--AGLIIYWSW 544
           +    +   +S+++   +   +    +  Q  +    PV+F      FP  AG+++Y   
Sbjct: 269 IVAMIVFFGISLYVSQMLSGQNSSGGNPQQDTVNKITPVIFSGMFLFFPLPAGVLMYMVI 328

Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
            N+   +Q  ++ +       L   +     +   +
Sbjct: 329 GNIFQTLQTYILSR-EPLPEELQKLVVLQDKEKEAA 363



 Score = 55.4 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 2/119 (1%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY    ++G+AI+  T+ ++   +PL+     S   M+ +Q
Sbjct: 1   MDFGIGFLSNNVMLPIIDFFYGFFPSYGLAIVALTLIIRFALYPLSAGSIRSMRRMRVVQ 60

Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P +       K +       Q+  +   +    NPLAGC P+LLQ+PV  A++  +  S
Sbjct: 61  PVMQRRMAEIKERYKDDPQKQQEEMVNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGS 119


>gi|195174552|ref|XP_002028037.1| GL15036 [Drosophila persimilis]
 gi|194115759|gb|EDW37802.1| GL15036 [Drosophila persimilis]
          Length = 350

 Score = 60.8 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 92/313 (29%), Gaps = 43/313 (13%)

Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323
           I +  T+ + +    +    R  A   A   ++    S     F    +   P    Y +
Sbjct: 15  IAATYTNGYLRASTPNGTPDRRLASTEAAAASVQLANSGDLVGFWQTLSNSTPV--AYMQ 72

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
           D  I   +        ++ +  +   +      +        +T    ++     A    
Sbjct: 73  DALIQIHDYSN---LPWWSSIVLSTFLFRGVITLPLTIYQQKITARIERIALEMPA--LV 127

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFA 442
                   +  +  +  +K      +   K   Q L    N +P+     +  QIP++  
Sbjct: 128 EELKREAAMARQKFKWSDKETSIVYRRSIKKQWQNLIVRDNCHPMKTIIVLWGQIPLWIF 187

Query: 443 IYKVISISLEMRHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGF 487
               +   + M   P                +GWI +L   D + I  +         G 
Sbjct: 188 QSVALRNLVYMLPDPTTLQAQITATEMTIGGFGWIPNLTVVDSSYILPV-------TLGL 240

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWS 543
           +++GI  +           M+          I       + VV V    + P+ L +YW 
Sbjct: 241 LNLGIIEL---------QAMTRTRPPTRLQNIANHVFRGLSVVMVPVACTVPSALCVYWV 291

Query: 544 WSNVISIVQQAVI 556
            S+   + Q  ++
Sbjct: 292 ASSTFGLAQNMLL 304


>gi|307152649|ref|YP_003888033.1| membrane protein insertase, YidC/Oxa1 family [Cyanothece sp. PCC
           7822]
 gi|306982877|gb|ADN14758.1| membrane protein insertase, YidC/Oxa1 family [Cyanothece sp. PCC
           7822]
          Length = 382

 Score = 60.8 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/120 (30%), Positives = 68/120 (56%), Gaps = 4/120 (3%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY +V ++G AI+  T+ ++   +PL+  Q  +   M+  Q
Sbjct: 1   MDFGVGFISTNIMLPILDFFYRIVPSYGFAIIALTLVIRFALYPLSAGQIRNMRKMRITQ 60

Query: 394 PKIDELRE---KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + E +E   K  ++ PQ  Q+ M ++ +    NPLAGC P+LLQ+P+ FA++  +  S
Sbjct: 61  PLMKERQEEIQKRYKNDPQKQQEEMSKIMQEFG-NPLAGCLPLLLQMPILFALFATLRGS 119



 Score = 52.7 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 12/111 (10%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-----ILNWMPVVFVFALS 532
           G +         +    +   +S++I  ++S        A      +    PV+F     
Sbjct: 257 GAVNDDGSINWDILGMVLFFGISIYINQELSGSQTGASNAQQQQQAVNKITPVIFSAMFL 316

Query: 533 SFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
            FP  AG+++Y   +N+   +Q  ++M+       L + L+    +   ++
Sbjct: 317 FFPLPAGVLMYIVVANIFQTIQTVILMR-----EPLPENLQKLVEQQEKTE 362


>gi|115947368|ref|XP_784727.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115959211|ref|XP_001193818.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 340

 Score = 60.8 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 81/256 (31%), Gaps = 34/256 (13%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
            ++      A   F+ +       +      +  ++         +AI    + V++   
Sbjct: 39  LLNSQPVHFAESIFQYVHSVTGLPW--WATVVATTFTLRFSLTLPLAIYSQNIRVRVENL 96

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCW 431
                     + ++    +    +EK+ +   Q      +++   +LY   N +P  G  
Sbjct: 97  QPEVIALAKRSFVERFAARA--KQEKWSEKRAQRAFVGLVRRYSKELYVRDNCHPAKGSI 154

Query: 432 PILLQIPVFFAIYKVISISLE-----MRHAPFW-----GWIKDLAAADPTNIFT-LFGIL 480
             L+Q+P++  +   +          M   P        W   L   DPT I   L G+L
Sbjct: 155 LFLVQLPMWIFLSLALRNMTGALSERMYVVPDLATGGTLWFPSLIVPDPTFILPVLVGVL 214

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
                    +            +Q  ++           L  + VV +   +  P+ + +
Sbjct: 215 NLSNIEMHALHK-----GRVTRVQRYVNNS---------LRTLSVVMIPIAAYMPSAMAL 260

Query: 541 YWSWSNVISIVQQAVI 556
           YWS S    + Q  ++
Sbjct: 261 YWSVSAFYGLGQNILL 276


>gi|224007887|ref|XP_002292903.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971765|gb|EED90099.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 426

 Score = 60.8 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 64/173 (36%), Gaps = 15/173 (8%)

Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451
           +   +     + + S  +     +  +++ H +N L      L+QIPVF+     I   +
Sbjct: 60  VMDGMVREAAQAQMSLLKTTVATLRGIFRLHKVNLLDIFKSPLMQIPVFWYFAIDIRKII 119

Query: 452 -----EMRHA---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
                 +        + WI DL   DP     +   L  Y      VG   +  S     
Sbjct: 120 NGSDPALAQQLVDSSFLWITDLTEPDPWYGLPIITGLLLYWNVETAVGKKAL--SGETSS 177

Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           Q +M+    D  Q+     + V     ++  P+G+ IY + S + S++Q   +
Sbjct: 178 QSRMALFLKDAFQS-----LAVFMPCFMAQQPSGVQIYLTTSMLFSLLQSMAM 225


>gi|17230907|ref|NP_487455.1| putative inner membrane protein translocase component YidC [Nostoc
           sp. PCC 7120]
 gi|38503115|sp|Q8YRM9|OXAA_ANASP RecName: Full=Inner membrane protein oxaA
 gi|17132548|dbj|BAB75114.1| alr3415 [Nostoc sp. PCC 7120]
          Length = 380

 Score = 60.8 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALSSF 534
           G +         +    +   +S+++   +   +    +  Q  +    PV+F      F
Sbjct: 257 GAIDPDNTIHWDIVGMIVFFGISLYVSQMLSGQNSSGGNPQQDTVNKITPVIFSGMFLFF 316

Query: 535 P--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           P  AG+++Y    NV   +Q  ++ +        I ++  T  K   ++
Sbjct: 317 PLPAGVLMYMVIGNVFQTLQTYILSR--EPLPEEIQKIVETQEKQAVAE 363



 Score = 55.0 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 4/120 (3%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY++V ++G+AI+  T+ ++   +PL+  Q  +   M+ +Q
Sbjct: 1   MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQ 60

Query: 394 PKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + +   +     +  PQ  Q+ M+ + K    NPLAGC P+LLQ+PV  A++  +  S
Sbjct: 61  PLMQKRMAEIKERYKDDPQKQQEEMMNVQKEFG-NPLAGCLPLLLQMPVLLALFATLRGS 119


>gi|239931058|ref|ZP_04688011.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
 gi|291439429|ref|ZP_06578819.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
 gi|291342324|gb|EFE69280.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
          Length = 239

 Score = 60.8 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 23/215 (10%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L T  V+LL  PL++           +QPKI ELR +   +P + LQ+A++ L+    
Sbjct: 28  IVLFTALVRLLVHPLSRAAARGQKARAALQPKIAELRRRHGGNPEK-LQRAVLDLHAREK 86

Query: 424 INPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPFWGWIKDLAAADPTNIFT--LFGIL 480
           ++PL+GC P L Q+P FF +Y +  S ++  R     G   +L AA     +T  L    
Sbjct: 87  VSPLSGCLPSLFQLPAFFLLYHLFSSGTIGGRDNELLG--HELFAAPLGGRWTDALGAGG 144

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQ--MKMSPP------------PADKGQAMILNWMPVV 526
           PF  PG ++ G++ ++  ++ F     K S                  G A +   +P +
Sbjct: 145 PFGGPGLVYAGLFALVAVVAAFGYRLTKRSMAANAAAAGGGSGEQQVPGMAAMTRALPFM 204

Query: 527 FVFALSS---FPAGLIIYWSWSNVISIVQQAVIMK 558
               L +    P    +Y   S   S+V++AV+ +
Sbjct: 205 SFLTLVTVAVVPLAAALYVVTSTTWSVVERAVLYR 239


>gi|309778005|ref|ZP_07672947.1| stage III sporulation protein J [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308914294|gb|EFP60092.1| stage III sporulation protein J [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 331

 Score = 60.4 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 96/251 (38%), Gaps = 27/251 (10%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
           F   ID GWF  +       +  F     + GI I+  T  ++LL F  + K  V++  M
Sbjct: 81  FSDAIDEGWFNGLIVWPIAFLINFVADFSDAGIGIIAATFLIQLLIFLFSIKSQVASQRM 140

Query: 390 KNIQPKIDELREKF----KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
           + IQP++++++ K+             + M  LY  + INP        +Q PV   +Y+
Sbjct: 141 QAIQPEMNKIQAKYAGKTDDRSKMQQAQEMQALYSKYKINPFGTLLVTFIQFPVILGMYQ 200

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS-MFIQ 504
               +  +    F G   +L A  P   F L     +Y+  F+ +  + ++      ++Q
Sbjct: 201 ATMRAYSVVTGSFQG--INL-AKTPIEGFNLGNY--WYVVIFVLMVAFQLLSFKMPQWLQ 255

Query: 505 -----------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
                             K           M++     +      ++P G+  YW  +++
Sbjct: 256 EHRKKKLNIKEKKYAEPKKKGGNGMMGSMNMMMYMSTGMIAIFAINWPLGMSFYWLVNSL 315

Query: 548 ISIVQQAVIMK 558
             ++Q  VI K
Sbjct: 316 ARVIQNIVIHK 326


>gi|150018481|ref|YP_001310735.1| 60 kDa inner membrane insertion protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149904946|gb|ABR35779.1| 60 kDa inner membrane insertion protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 214

 Score = 60.4 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 15/213 (7%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              I+  + + ++YF+N+ G+ GIAI+L T+ VKL+  P++ KQ +S  + +     ++E
Sbjct: 1   MNIISNLLNVSLNYFFNITGDLGIAIILLTILVKLILMPISFKQKLSMYSQQEFSKGLEE 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           ++EK+K +  ++  +   Q Y   N   + G    LLQIP+ F +Y+VI           
Sbjct: 61  IKEKYKSNKEKLEIET--QKYFKQNARGMIGILSSLLQIPIVFNLYRVILNMPMQVGTAL 118

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
             W+  L  +D   I      +    P      I P I  L +  Q K+S          
Sbjct: 119 IPWVVSLKMSDSLFIVPAIYAVSMLSP-----NILPYIPFLRLKAQAKLSKTNIIITT-- 171

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
                 ++        P  L IY+  +++ S V
Sbjct: 172 ------IISGLVTFKAPIALGIYFITTSLFSFV 198


>gi|157822095|ref|NP_001099470.1| mitochondrial inner membrane protein COX18 [Rattus norvegicus]
 gi|149033748|gb|EDL88544.1| similar to hypothetical protein FLJ38991 (predicted), isoform CRA_b
           [Rattus norvegicus]
          Length = 331

 Score = 60.4 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 70/183 (38%), Gaps = 21/183 (11%)

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
                +     +    +   + +  + +++ + +LY   N +P      + +Q+P++   
Sbjct: 122 RLNQEVAVCARQFGWSKRVARLTYLKNIRRLVSELYVRDNCHPFKATVLVWVQLPMWV-- 179

Query: 444 YKVISISLEMRHAPFWGWIKD-LAAADPTNIFTLFGILPFYLPGFMHVGIWPI------I 496
                IS+ +R+        D ++  D              L       I P+      +
Sbjct: 180 ----FISVALRNLSTGATHSDGISVQDQLAAGGTLWFP--DLTAVDSTWILPVSVGVVNL 233

Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
           + + +F   K+      + Q  + N++    V+ V   ++ P+ L++YW  S+++ + Q 
Sbjct: 234 LIVEIFALQKI---GKSRFQMYVTNFVRAVSVLMVPVAATVPSALVLYWLCSSLMGLSQN 290

Query: 554 AVI 556
            ++
Sbjct: 291 LLL 293


>gi|218248781|ref|YP_002374152.1| putative inner membrane protein translocase component YidC
           [Cyanothece sp. PCC 8801]
 gi|257061840|ref|YP_003139728.1| inner membrane protein translocase component YidC [Cyanothece sp.
           PCC 8802]
 gi|218169259|gb|ACK67996.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 8801]
 gi|256592006|gb|ACV02893.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 8802]
          Length = 379

 Score = 60.4 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 44/109 (40%), Gaps = 10/109 (9%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSF 534
           G++         +    +   LS+++  ++S        + Q  +    PV+F      F
Sbjct: 257 GVVDDDGSINWDILGMILFFGLSIYLNQELSGASGGGSAQQQQAVNKITPVIFSGMFLFF 316

Query: 535 P--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           P  AG+++Y   +NV   +Q  ++M+       L + L+    +   ++
Sbjct: 317 PLPAGVLMYIVVANVFQTLQTVILMR-----EPLPENLQKLVEQQEKAE 360



 Score = 58.5 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 2/119 (1%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY +V ++G AI+  T+ ++   +PL+  Q  +   MK  Q
Sbjct: 1   MDFGVGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRFGLYPLSAGQIRNMRKMKITQ 60

Query: 394 PKIDELREKFKQS--PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + E +E+ ++        Q+  +        NPLAGC P+LLQ+P+ FA++  +  S
Sbjct: 61  PLMKERQEEIQRRYKDDPAKQQEEMGKLMQEFGNPLAGCLPLLLQMPILFALFATLRGS 119


>gi|119510151|ref|ZP_01629290.1| putative inner membrane protein translocase component YidC
           [Nodularia spumigena CCY9414]
 gi|119465212|gb|EAW46110.1| putative inner membrane protein translocase component YidC
           [Nodularia spumigena CCY9414]
          Length = 380

 Score = 60.4 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALSSF 534
           G           +    +   +S+++   +   +    +  Q  +    PV+F      F
Sbjct: 257 GAQNPDGQINWDIVSMILFFGVSLYVSQMISGQNSSGGNPQQDTVNKITPVIFSGMFLFF 316

Query: 535 P--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           P  AG+++Y    N+    Q  ++ +        +  + +T  K   ++
Sbjct: 317 PLPAGVLMYMVIGNIFQTAQTYILSR--EPLPEGLQEIVATQEKETAAE 363



 Score = 53.1 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY +V ++G+AI+  T+ ++   +PL+     +   M+ +Q
Sbjct: 1   MDFGIGFLSNNVMLPIIDFFYGIVPSYGLAIVALTLIIRFALYPLSAGSIRNMRKMRIVQ 60

Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + +     K K       Q+  +   +    NPLAGC P++LQ+PV  A++  +  S
Sbjct: 61  PLMQKRMAEIKEKYKDNPQKQQEEMVNVQKEFGNPLAGCLPLVLQMPVLLALFATLRGS 119


>gi|221136502|ref|XP_002171142.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 131

 Score = 60.0 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 11/120 (9%)

Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAMIQLYK 420
           TV  + L FPL  K   +TA +  ++P++++L+EK +++               +   +K
Sbjct: 1   TVAFRALVFPLMIKGQANTARLAAVKPELEKLQEKLREAANYHNPNIRAQASIELQDFFK 60

Query: 421 THNINPLAGCWPILLQIPVFFAIY----KVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476
            HN NPL      L+Q+P+F + +    K+ ++ +E        W  DL+AADP  IF +
Sbjct: 61  KHNCNPLKSIISPLVQLPLFISFFIAIRKMCNLPVESLQTGGILWFSDLSAADPYMIFPI 120


>gi|33861742|ref|NP_893303.1| putative inner membrane protein translocase component YidC
           [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
 gi|38502915|sp|Q7V0R8|OXAA_PROMP RecName: Full=Inner membrane protein oxaA
 gi|33640110|emb|CAE19645.1| Putative inner membrane protein; similar to 60 kDa inner membrane
           protein family [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 379

 Score = 60.0 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSP--PPADKGQA 517
           I  LAA          G + FY+ G ++  I  ++    L++ +   +S    P++  Q+
Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGSINWDIATLVGAFGLTLLLSQVLSSQGMPSNAQQS 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 PV+       FP  AG+++Y   +N+    Q  ++ K
Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK 338



 Score = 50.0 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 4/114 (3%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399
           +   K +  ++ +FY LV ++G+AI+  TV +++  FPL+     S   MK  QP + + 
Sbjct: 4   FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKR 63

Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           + + K      P+  Q+ + +L      +PLAGC P+++Q+PV FA++  +  S
Sbjct: 64  QAEIKSKFSSDPKKQQEELGKLMNEFG-SPLAGCLPLIVQMPVLFALFATLRGS 116


>gi|254416206|ref|ZP_05029960.1| 60Kd inner membrane protein [Microcoleus chthonoplastes PCC 7420]
 gi|196176888|gb|EDX71898.1| 60Kd inner membrane protein [Microcoleus chthonoplastes PCC 7420]
          Length = 334

 Score = 60.0 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 43/109 (39%), Gaps = 10/109 (9%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVF--VFALS 532
           G         + +    +   +S+++   +   + P     Q  +    PV+F  +F   
Sbjct: 202 GAFGDDGEIHLDIVGMILFFGVSLYVNQVLTGQNAPSGSSQQNTVNKITPVLFSGMFFFF 261

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             PAG+++Y   +NV   +Q  ++M+       L D ++    +   ++
Sbjct: 262 PLPAGVLMYMVIANVFQTLQSFILMR-----EPLPDNIQKMVDEQEKAE 305



 Score = 39.2 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 389 MKNIQPKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
           M+  QP + + +E  + +    +V Q+  +        NPLAGC+P+LLQ+PV FA++  
Sbjct: 1   MRITQPLMKKRQEEIQQRYGDDKVKQQEEMSKLFQEFGNPLAGCFPVLLQMPVLFALFAT 60

Query: 447 ISIS 450
           +  S
Sbjct: 61  LRGS 64


>gi|291299759|ref|YP_003511037.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290568979|gb|ADD41944.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 235

 Score = 60.0 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 15/199 (7%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I++ T+ V+LL  PL++         + + PK+ EL+ +      Q L  A  +LY+T  
Sbjct: 28  IVVFTIAVRLLLHPLSRAAVRGEKTRQRLAPKMAELKRRHGD-DRQRLVDATGELYRTEG 86

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP-----TNIFTLFG 478
             PL GC P+LLQ+PVFF +Y+ +  +  +  A     + D  A  P     +     FG
Sbjct: 87  STPLTGCLPMLLQLPVFFVMYR-LFTTDSISGAANPL-LDDTLAGTPLGQHLSETLAAFG 144

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMK----MSPPPADKGQAMILNWMPVVFV---FAL 531
           +       F  + +    ++L  + + +     SP P +   A +   MP++        
Sbjct: 145 LASVQTLVFGVLLVALAAVALWTYRRTRRGMADSPNPPEGPAAAVARVMPLLSFGTLIVA 204

Query: 532 SSFPAGLIIYWSWSNVISI 550
           +  P    IY   +   ++
Sbjct: 205 AIVPLAAGIYLLATTTWTV 223


>gi|47459465|ref|YP_016327.1| putative inner membrane protein translocase component YidC
           [Mycoplasma mobile 163K]
 gi|47458795|gb|AAT28116.1| putative preprotein translocase subunit [Mycoplasma mobile 163K]
          Length = 656

 Score = 60.0 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 78/211 (36%), Gaps = 15/211 (7%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ----- 412
                AI      V++  F +  K   +   M+ + PK  ++  K+              
Sbjct: 432 FGIIAAIFFVVFLVRIFSFLVTSKSVFAQVKMQELNPKKAKIDAKYAAFKGNKEMERRKA 491

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472
           + + QLYK +N+   +    IL+ +P+FFA++K+I     ++   F G      +     
Sbjct: 492 QEVQQLYKKNNVKLSSQFTSILVSMPIFFAMFKIIQGIPSIKVTTFLGVTYSATSWQELL 551

Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA-------MILNWMPV 525
               F  LP  +  F+   I      +  F+  + +    +  +           N +  
Sbjct: 552 FNANFAYLPILIVVFVVQLISQF---VPRFLTKRRTKERTNVLEREALRKANRTQNIVSF 608

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           VF F      AG+ IYW    + +I+Q   +
Sbjct: 609 VFAFFGLVLTAGVQIYWIAGGIFTILQSVFV 639


>gi|236585|gb|AAB19981.1| protein involved in thiophene and furan oxidation [Escherichia
           coli]
          Length = 439

 Score = 60.0 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 63/176 (35%), Gaps = 12/176 (6%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI------MLTTVFVKLLFFPLAKKQY 383
              +      +   +    L+        +   AI      ++ T    ++   L     
Sbjct: 136 LWSMAPQQTPWIRQRSGRNLLPVCQRNCRSPWCAIKPMDPQLVVTGSHIIITLCLLHHVP 195

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN-----PLAGCWPILLQIP 438
                +           E    +      +   Q      +      PL GC+P+L+Q+P
Sbjct: 196 ADQRPVHLHGEDAYVAAEDSGNARASGRSQTAYQPGNDGAVQSCEGQPLGGCFPLLIQMP 255

Query: 439 VFFAIYKVISISLEMRHAPFWGWIK-DLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
           +F A+Y ++  S+E+R APF  WI+   A  +   + TL G+  +   G +++ + 
Sbjct: 256 IFLALYYMLMGSVELRQAPFALWIQVKFAGVEHVGVHTLIGLFRYRNRGGVYISVL 311


>gi|16330836|ref|NP_441564.1| inner membrane protein translocase component YidC [Synechocystis
           sp. PCC 6803]
 gi|38502896|sp|P74155|OXAA_SYNY3 RecName: Full=Inner membrane protein oxaA
 gi|1653329|dbj|BAA18244.1| inner membrane protein [Synechocystis sp. PCC 6803]
          Length = 384

 Score = 59.6 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 2/119 (1%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +F+ +V ++G AI+  T+ ++L  +PL+  Q  +   M+  Q
Sbjct: 1   MDFGIGFISTNIMLPILDFFFGIVHSYGFAIIALTLVIRLGLYPLSAGQIRNMRKMRITQ 60

Query: 394 PKIDELREKFKQS--PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + E +E+ ++        Q+  +        NPLAGC P+LLQ+P+ FA++  +  S
Sbjct: 61  PLMKERQEEIQKRYKDDPAKQQEEMAKVMKEFGNPLAGCLPLLLQMPILFALFATLRGS 119



 Score = 47.3 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 40/100 (40%), Gaps = 14/100 (14%)

Query: 490 VGIWPIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFP--AGLII 540
           +    +    S+++  ++S       P    + Q  I    P++F      FP  AG+++
Sbjct: 269 ILGMIVFFGFSIYLNQELSGASGGGAPNAQAQQQQTINKITPILFSGMFLFFPLPAGVLM 328

Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           Y   +NV   +Q  ++M+       L + L+    +   +
Sbjct: 329 YIVMANVFQTIQTLILMR-----EPLPENLQKLLDEQQKA 363


>gi|110741684|dbj|BAE98788.1| hypothetical protein [Arabidopsis thaliana]
          Length = 302

 Score = 59.6 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 15/179 (8%)

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
             ++  ++G AI+L TV VK   FPL KKQ  S   MK++ P+I  ++E++     ++  
Sbjct: 117 TVHVPYSYGFAIILLTVLVKAATFPLTKKQVESAMAMKSLTPQIKAIQERYAGDQEKIQL 176

Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP- 470
               +LYK   INPLAGC P L  IPV+  +Y+ +S  + E      + WI  LA     
Sbjct: 177 -ETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTV 235

Query: 471 ------TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMF--IQMKMSPPPADKGQA 517
                 + I  LF    G  P   P  +   + P+++  S +  IQ+  S    D    
Sbjct: 236 AARQNGSGISWLFPFIEGHPPLGWPDTLAYLVLPLLLVFSQYLSIQIMQSSQSNDPAMK 294


>gi|50555926|ref|XP_505371.1| YALI0F13387p [Yarrowia lipolytica]
 gi|49651241|emb|CAG78178.1| YALI0F13387p [Yarrowia lipolytica]
          Length = 314

 Score = 59.6 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 55/173 (31%), Gaps = 23/173 (13%)

Query: 408 PQVLQKAMIQLYKTHNINPLAG-CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466
            +  +K  ++LYK H            L+Q+P++  +   +            GW     
Sbjct: 117 MKERRKRRVKLYKEHGCEMWKSLFIGPLVQLPIWITMSLAVRA--------MCGWTVVKG 168

Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--------- 517
                ++ T   +    L    H G+ P  + +   + ++++     +            
Sbjct: 169 IPVVKSMGTEGALWFPDLLMMDHSGVLPAAVGIITLLNVELTTKAQAQAMGTTGSEGPKL 228

Query: 518 -MILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565
             ++        +      +  P  + +YW  S+  S++Q  ++ K       
Sbjct: 229 PKMMANFARVGAIALFSIAAQTPTAVCLYWISSSGFSLIQNVLLNKYMPLREE 281


>gi|307214233|gb|EFN89339.1| Mitochondrial inner membrane protein COX18 [Harpegnathos saltator]
          Length = 287

 Score = 59.6 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 76/236 (32%), Gaps = 32/236 (13%)

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA--------------NMKNI 392
             L+         + + I+LTTV ++                                  
Sbjct: 12  DFLLWMHDYTGLPWWLVIVLTTVVMRATVTLPLSFYQQYIIAKLENLKLEMDEIVKEMKK 71

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQ-----LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
           +      + K+ +     L    ++     L    N +P      +L Q+P++ ++    
Sbjct: 72  ETDYGVYKYKWSKEYATRLYTHSVKKQWNNLIIRENCHPAKASILVLAQLPLWISL---- 127

Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
             S+ +R+  +    +D +A      F   G L           + P++M L     +++
Sbjct: 128 --SMSIRNLCYMLPKQDASAYATYQEFITDGFLWVTNLTVADPFLLPVMMGLFNLAIIEI 185

Query: 508 SPPPADKGQAMILNWMPVVF-------VFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +     K    +  +M   F       V      P+ + +YW+ S+   ++Q  ++
Sbjct: 186 THMNRIKETTKLTRYMIYFFRIVVIGMVPVAMYVPSCVSLYWATSSAFGLLQNLIL 241


>gi|195135595|ref|XP_002012218.1| GI16849 [Drosophila mojavensis]
 gi|193918482|gb|EDW17349.1| GI16849 [Drosophila mojavensis]
          Length = 322

 Score = 59.6 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 72/256 (28%), Gaps = 48/256 (18%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST--------- 386
                 +A     L+         +  AI+L+T   + +                     
Sbjct: 33  LSNSTPVAYIQDALIQIHDYSGLPWWSAIVLSTFLFRSVVTLPLTIYQHRITARIEGIAL 92

Query: 387 ---------ANMKNIQPKIDELREKFKQSPPQVLQKAM-IQLYKTHNINPLAGCWPILLQ 436
                         +  +  +  +K      +   K    +L    N +P+     +  Q
Sbjct: 93  EMPAIVEELKREAAMAKQKFKWSDKQTAVVYRRSIKKQWQKLIIRDNCHPMKTIIVLWGQ 152

Query: 437 IPVFFAIYKVISISLEMRHAPF---------------WGWIKDLAAADPTNIFTLFGILP 481
           IP++      +   + M   P                +GWI +L   D + I        
Sbjct: 153 IPLWICQSVALRNLVYMLPDPTSLKAQIAATELTIGGFGWIPNLTVVDGSYIL------- 205

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLII 540
              P  + +    II   +M    +  P          +   + V+ V    + P+ L +
Sbjct: 206 ---PVALGLINLAIIEVQTM---TRTRPQTRLQNIANNVFRGLSVLMVPIACTVPSALCV 259

Query: 541 YWSWSNVISIVQQAVI 556
           YW  S+   + Q  ++
Sbjct: 260 YWVASSSFGLAQNLLL 275


>gi|194246772|ref|YP_002004411.1| probable preprotein translocase subunit YidC [Candidatus
           Phytoplasma mali]
 gi|193807129|emb|CAP18567.1| probable preprotein translocase subunit YidC [Candidatus
           Phytoplasma mali]
          Length = 572

 Score = 59.6 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 77/474 (16%), Positives = 151/474 (31%), Gaps = 43/474 (9%)

Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNN 189
             + EL N+  +         T +  + ++         +  I  D  Y F         
Sbjct: 104 TESQELLNNIKIEFEYKEDDKTASQSVFIIKIIDIQSKIQNIIKFDNEYNFNYFYFDL-- 161

Query: 190 SIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN 249
              Q  F P  +  + +     N        +     K +VE+KY      S +      
Sbjct: 162 ---QKNFPPESKDFQKQQNKNANDVKDFFTVLMGTNYKYIVEEKYKKYFDISENKDFFLK 218

Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG--KSITTTNF 307
                ++K + S+       +   +             K         P     +   N 
Sbjct: 219 FSNSNNNKKFESLLSQELFNNEKKEINSHDLSIYNQIIKQVVAGNNNPPHLIAKLKFNND 278

Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW---FYFIAKPMFMLMSYFYNLVGNFGIAI 364
           ++     F     Y       + +     G+   +  +   +   +  F  + GN G  I
Sbjct: 279 IYFDFPIFVNNSGYLPIQWPSKLDWSGKLGFYYIWNVLIISIGFFLYIFSYIFGNLGFGI 338

Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYK 420
           +LTT+ V+ L +P+  K    T NM  +QP+ID++R+K+         Q +Q   +++YK
Sbjct: 339 ILTTILVRTLSWPIYTKTSTFTLNMSLVQPEIDKIRDKYILKKDPVSIQKMQLETLRVYK 398

Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD-LAAADPTNIFTLFGI 479
            +NI    G +   LQIP+F ++   ++     R       + +      P   F     
Sbjct: 399 KYNIG-FLGMFTTFLQIPIFISMLTTLNR---FRIPGGIFNLDNKFLDKTPFLGFIKLSA 454

Query: 480 LPFYLPGFMHVGIWPII---MSLSMFIQMKMSPPPADKGQAM------------------ 518
                     + I  ++   + ++M I  K+S       Q                    
Sbjct: 455 STTNDNDIRDILIKILLSTFVGITMIILNKISFKKPFYLQNKSYTVLNIEEKAKREQTEK 514

Query: 519 ---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
              I+++  V  +   +     L +YW   N  +I Q     +    +  L+ +
Sbjct: 515 SFKIVSYFMVAIMVFAAFNDNVLSLYWLVGNTYTIFQTVFNRQQMEKKYYLLKQ 568


>gi|18204899|gb|AAH21612.1| Cox18 protein [Mus musculus]
          Length = 200

 Score = 59.6 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 66/166 (39%), Gaps = 37/166 (22%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH------------- 455
           + +++ + +LY   N +P      + +Q+P++        IS+ +R+             
Sbjct: 16  KNMRRLVSELYVRDNCHPFKATVLVWVQLPMWV------FISVALRNLSTGATHSDGISV 69

Query: 456 -----APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
                A    W  DL A D T I      +   +   + V I+ +    +   QM ++  
Sbjct: 70  QEQLAAGGTLWFPDLTAVDSTWILP----VSVGVVNLLIVEIFALQKIGTSRFQMHVT-- 123

Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
                    +  + V+ +   ++ P+ L++YW  S+++ + Q  ++
Sbjct: 124 -------NFVRAVSVLMIPVAATVPSALVLYWLCSSLMGLAQNLLL 162


>gi|221124708|ref|XP_002158284.1| PREDICTED: similar to mitochondrial COX18 [Hydra magnipapillata]
          Length = 298

 Score = 59.6 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 93/274 (33%), Gaps = 53/274 (19%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
            E+     ++ F        +    +   N  +   I ++TV ++ +       +    A
Sbjct: 21  HEIKRFSSYYTFPLFTGTQQLLEASHFYSNLPWWTTIAISTVLLRCITTVPMGIKQNRIA 80

Query: 388 NMKNI------------------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429
               +                  +   +  +++ +Q   + + K   ++YK ++I+ +  
Sbjct: 81  AKMELLQPQLKNLGDSVRSSLFSKNLNEADKKRMQQDFRKEIAKRTSEIYKKNDISLMQF 140

Query: 430 CWPILLQIPVFFAIYKVISI---------SLEMRHAPF-------WGWIKDLAAADPTNI 473
                +Q+P +  +   +           ++++ + P          W +DL+  DP  I
Sbjct: 141 IMLPWIQMPTWITLSLALRNISGCRLQNETIDVIYMPSEGITTEGLLWFQDLSVPDPFYI 200

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533
                 +PF +       I    M    F    + P         IL  + V+  F  S 
Sbjct: 201 ------IPFIILFVNIANIEINTMRAQGFW-KYLKP---------ILRLVAVLTAFISSQ 244

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567
            P+ +  YW  S++  ++Q  VI+K+      L 
Sbjct: 245 VPSAMSFYWCTSSICGLMQN-VILKIPSVRRKLD 277


>gi|194865708|ref|XP_001971564.1| GG14371 [Drosophila erecta]
 gi|190653347|gb|EDV50590.1| GG14371 [Drosophila erecta]
          Length = 351

 Score = 59.2 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 73/240 (30%), Gaps = 34/240 (14%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
             G  ++ +  +   +      +        +T    ++     A            +  
Sbjct: 81  YSGLPWWASIVLSTFLLRSVVTLPLTIYQHKITARIEQIALEMPA--IVEELKKEAAMAK 138

Query: 395 KIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           +  +  E+      +   K   Q L    N +P+     +  QIP++         S+ +
Sbjct: 139 RKFKWSEQQTLIVYRRSIKKQWQNLIVRDNCHPMKTMIVLWGQIPLWI------FQSVAL 192

Query: 454 RHAPFWGWIKDLAAADPTNI----------FTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           R+  +          DPT+I             FG +P  L    H  I P+ + L    
Sbjct: 193 RNLVYML-------PDPTSIQAQIVTTEMTIGGFGWIP-NLTVVDHSYILPVALGLINLA 244

Query: 504 Q---MKMSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
                 MS          I       + VV V    + P+ L +YW  S+   + Q  +I
Sbjct: 245 IIEVQAMSRTRPSTRLQNIANNVFRGLSVVMVPVACTVPSALCVYWVASSSFGLAQNLLI 304


>gi|73975219|ref|XP_539312.2| PREDICTED: similar to Probable inner membrane protein OXA1L2
           isoform 2 [Canis familiaris]
          Length = 333

 Score = 59.2 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 74/245 (30%), Gaps = 51/245 (20%)

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
            ML+         +   I L TV ++                         +   +    
Sbjct: 68  EMLLGLHAAAGLPWWACIGLGTVALRGAVTLPLAAYQHYILAKVENLQPEIKNIARHLNQ 127

Query: 407 PP-------------------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
                                + +++ + +LY   N +P      + +Q P++  +   +
Sbjct: 128 EVAVRANQLKWSKRVARLTYLKNMRRLVSELYVRDNCHPFKATILVWIQFPMWIFMSVAL 187

Query: 448 SI------------SLEMRHAPF-WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
                         S++ + A     W  DL A D T I                + +  
Sbjct: 188 RNFSTGAAHSEAGFSVQEQLATDGILWFPDLTALDSTWIL---------PISVGVINLLI 238

Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIV 551
           +     +F   K+        Q  I  ++    V+ +   ++ P+ +++YW  S+++ + 
Sbjct: 239 V----EIFALQKIGMSR---FQTYITYFVRAVSVLMIPVAATVPSSIVLYWLCSSLMGLS 291

Query: 552 QQAVI 556
           Q  ++
Sbjct: 292 QNLLL 296


>gi|67902484|ref|XP_681498.1| hypothetical protein AN8229.2 [Aspergillus nidulans FGSC A4]
 gi|40739695|gb|EAA58885.1| hypothetical protein AN8229.2 [Aspergillus nidulans FGSC A4]
          Length = 484

 Score = 58.8 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 87/238 (36%), Gaps = 38/238 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
             + +  +  +  ++ + +   G   +  I+ T +F +L   PL  +   ++A + N QP
Sbjct: 100 LDYGWGPSAIVEFMIEHIHIYSGLPWVGSIIATGIFFRLAMAPLFWRAGDTSARLANAQP 159

Query: 395 KIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
            +  ++EK   +         Q  +  M +      I P     P++ Q+P+ F  ++VI
Sbjct: 160 ILAPIKEKMLNAARSGNQVEAQKWRAEMAKTNANLGIVPRNTFMPLVFQLPIGFGCFRVI 219

Query: 448 SISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
                +      A  + WI D   ADPT                    I PI+    + +
Sbjct: 220 EGMAGLPVPGLAAEQFAWINDFTVADPTY-------------------ILPILCCTVLHL 260

Query: 504 QMKMSPPPADKGQ-------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
            ++                   ++  +P    F ++ FPA L  Y+  +  + ++Q  
Sbjct: 261 SIRKGGETGSSMSGDMATIRKGMMYGIPAFSFFFVAFFPAALQAYFLTTGFLGLLQAY 318


>gi|124026366|ref|YP_001015482.1| putative inner membrane protein translocase component YidC
           [Prochlorococcus marinus str. NATL1A]
 gi|123961434|gb|ABM76217.1| Putative inner membrane protein [Prochlorococcus marinus str.
           NATL1A]
          Length = 382

 Score = 58.8 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSP--PPADKGQA 517
           I  LAA          G + FY+ G +H  + I      L++ I   +S    P +K Q+
Sbjct: 236 IPGLAAKSGFLFIKALGNVGFYVDGAIHWDIAILVAGFGLTLVISQVLSGRGMPVNKQQS 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 PV+       FP  AG+++Y   +N+   +Q  ++ +
Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVIANIFQGLQTFLLSR 338



 Score = 50.8 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  T+ ++L  FPL+     S   MK  QP + + + + 
Sbjct: 8   NLLIPILDFFYGLVPSYGLAIVALTIVIRLALFPLSAGSIRSARRMKIAQPVMQKRQAEI 67

Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           K      PQ  Q+ + +L      +PLAGC P+++Q+P+ FA++  +  S
Sbjct: 68  KSRYASNPQKQQEELGKLMGEFG-SPLAGCLPLIVQMPILFALFATLRGS 116


>gi|259481011|tpe|CBF74158.1| TPA: mitochondrial export translocase Oxa1, putative
           (AFU_orthologue; AFUA_5G03640) [Aspergillus nidulans
           FGSC A4]
          Length = 491

 Score = 58.8 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 87/238 (36%), Gaps = 38/238 (15%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
             + +  +  +  ++ + +   G   +  I+ T +F +L   PL  +   ++A + N QP
Sbjct: 107 LDYGWGPSAIVEFMIEHIHIYSGLPWVGSIIATGIFFRLAMAPLFWRAGDTSARLANAQP 166

Query: 395 KIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
            +  ++EK   +         Q  +  M +      I P     P++ Q+P+ F  ++VI
Sbjct: 167 ILAPIKEKMLNAARSGNQVEAQKWRAEMAKTNANLGIVPRNTFMPLVFQLPIGFGCFRVI 226

Query: 448 SISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
                +      A  + WI D   ADPT                    I PI+    + +
Sbjct: 227 EGMAGLPVPGLAAEQFAWINDFTVADPTY-------------------ILPILCCTVLHL 267

Query: 504 QMKMSPPPADKGQ-------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
            ++                   ++  +P    F ++ FPA L  Y+  +  + ++Q  
Sbjct: 268 SIRKGGETGSSMSGDMATIRKGMMYGIPAFSFFFVAFFPAALQAYFLTTGFLGLLQAY 325


>gi|156550973|ref|XP_001604208.1| PREDICTED: similar to cytochrome oxidase biogenesis protein (oxa1
           mitochondrial) [Nasonia vitripennis]
          Length = 310

 Score = 58.8 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 81/254 (31%), Gaps = 33/254 (12%)

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST---- 386
           E       +  +      L++        +  +I L+ +  + +         +      
Sbjct: 28  EFAKSVADWKIVHLAQNTLLNMHDFTGLPWWASITLSALMARAVITLPFSLIQMHNTGKL 87

Query: 387 --------------ANMKNIQPKIDELREKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCW 431
                          N  NI        EK  +      ++K    L +  N +P     
Sbjct: 88  QSIQPELEQSIKLLKNEANINVSYHGWPEKLARQHYTLAVKKEWSDLVQRENCHPAKSYI 147

Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-YLPGFMHV 490
            +L+Q+P++F+       S+  R+  +     D++A        + G      L    H 
Sbjct: 148 LVLIQLPLWFSF------SIATRNLSYMLPHPDVSAQITYMEMVVGGFGWVKNLTDVDHF 201

Query: 491 GIWPI------IMSLSMFIQMKMS-PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
            I P+      +  L      ++  P   D+ +  +  ++ V  V   +  PA   IYW 
Sbjct: 202 LILPVTLGLLNLAVLETHNMFRVGEPTKFDRWRMNLFRFISVALVPIAAYMPAATNIYWI 261

Query: 544 WSNVISIVQQAVIM 557
            S+   ++Q  ++ 
Sbjct: 262 TSSSYGLMQAFLLN 275


>gi|295836812|ref|ZP_06823745.1| preprotein translocase YidC subunit [Streptomyces sp. SPB74]
 gi|295826217|gb|EDY44441.2| preprotein translocase YidC subunit [Streptomyces sp. SPB74]
          Length = 291

 Score = 58.5 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 21/212 (9%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I++ T  V+LL  PLA+           + P+I  LR +     P+ L++A+++L+  H 
Sbjct: 41  IVVLTACVRLLLLPLARTAARGQRERARLAPEIAALR-RTYAKDPERLRRALVELHTRHG 99

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA---DPTNIFTLFGIL 480
           ++PL G  P+L Q+P FF +Y V S S  +   P       L AA   D  +     G L
Sbjct: 100 VSPLGGVLPMLCQLPFFFVLYHVFSSS-RIGGEPNGLLSHRLLAAPLGDRWSDALAHGGL 158

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMS--------PPPADKG---QAMILNWMPVV--F 527
            F   G +++ ++ ++  ++  +  + +        P P        A +   MP    F
Sbjct: 159 -FGARGLVYLALFALVAVVAT-LSSRRNRRQLAGSGPAPEGPQVPGAAALTRLMPYAAYF 216

Query: 528 VFALSS-FPAGLIIYWSWSNVISIVQQAVIMK 558
                +  P    +Y + S   S V++AV+ +
Sbjct: 217 TLISVAVVPLAGALYLATSTTWSAVERAVLYR 248


>gi|209527903|ref|ZP_03276391.1| 60 kDa inner membrane insertion protein [Arthrospira maxima CS-328]
 gi|209491658|gb|EDZ92025.1| 60 kDa inner membrane insertion protein [Arthrospira maxima CS-328]
          Length = 391

 Score = 58.5 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 7/106 (6%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DKGQAMILNWMPVVFV--FAL 531
           G           +    +   +S++I   +S        +  Q  +    PV+F   F  
Sbjct: 257 GAFDDDGNIHWDIVGMILGFGISLYINQVLSGQNQGSSGNPQQDTVNKITPVLFTGMFFF 316

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577
              PAG+++Y   +N+    Q A I+        L   +  +  + 
Sbjct: 317 FPLPAGVLLYMLIANIFQTGQ-AFILSREPLPENLQKIVEESERQT 361



 Score = 53.1 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 65/120 (54%), Gaps = 4/120 (3%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL---AKKQYVSTANMK 390
           +D+G  +     M  ++ +FY +V ++G+AI+  T+ ++   +PL   + +        +
Sbjct: 1   MDFGIGFLSNNLMLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSIRNMRRMKVTQ 60

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            +  +  +  +K  +  P   ++ M ++YK    NPLAGC+P+LLQ+P+ FA++  +  S
Sbjct: 61  PLMKERVDKIQKLYKDDPVKQREEMSRVYKELG-NPLAGCFPLLLQMPILFALFATLRGS 119


>gi|148673383|gb|EDL05330.1| COX18 cytochrome c oxidase assembly homolog (S. cerevisiae),
           isoform CRA_b [Mus musculus]
          Length = 183

 Score = 58.5 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 43/163 (26%)

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH------------------A 456
           + +LY   N +P      + +Q+P++        IS+ +R+                  A
Sbjct: 5   ISELYVRDNCHPFKATVLVWVQLPMWV------FISVALRNLSTGATHSDGISVQEQLAA 58

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
               W  DL A D T I                V +  +     +F   K+      + Q
Sbjct: 59  GGTLWFPDLTAVDSTWIL---------PVSVGVVNLLIV----EIFALQKI---GTSRFQ 102

Query: 517 AMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             + N++    V+ +   ++ P+ L++YW  S+++ + Q  ++
Sbjct: 103 MYVTNFVRAVSVLMIPVAATVPSALVLYWLCSSLMGLAQNLLL 145


>gi|219111049|ref|XP_002177276.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411811|gb|EEC51739.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 664

 Score = 58.5 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 79/265 (29%), Gaps = 57/265 (21%)

Query: 316 PTIHHYEKDLAIPRFEMLIDWG--WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373
             + +             I       Y+       +M            A   T     +
Sbjct: 224 EVLQNVSVWGGSGYLLKAIHADGVVPYWACFAAINVMVRIGLFPLVLYGAQTSTRFAKVV 283

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433
                    + +    + ++ K   LRE+      +     +  +YK H I+P+A     
Sbjct: 284 PEVQFLLSLFQADW--QRLRQKNAPLRERLM--LMRTNLGTLGGIYKLHGIHPMAVFLSP 339

Query: 434 LLQIPVFFAIYKVISISLEMRH--------------APFWGWIKDLAAADPTNIFTLFGI 479
           LLQ+P+F+       +S+++R                    W+ DL  ADP      FG 
Sbjct: 340 LLQVPLFW------YVSVDLRKIVNGLDPVLAQQLVESSVAWVPDLTEADP-----WFG- 387

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQ-----AMILNWMPVVF 527
                         P++  L M+           +S P   K         +   + V  
Sbjct: 388 -------------LPVLAGLVMYANVEVAIGRRSLSGPSVAKADTGVLLKDVFQSLAVFM 434

Query: 528 VFALSSFPAGLIIYWSWSNVISIVQ 552
               S  PAG+ IY   S + ++ Q
Sbjct: 435 PCFTSQMPAGVQIYLVTSFLFTMGQ 459


>gi|72382644|ref|YP_291999.1| putative inner membrane protein translocase component YidC
           [Prochlorococcus marinus str. NATL2A]
 gi|72002494|gb|AAZ58296.1| preprotein translocase subunit YidC [Prochlorococcus marinus str.
           NATL2A]
          Length = 382

 Score = 58.5 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSP--PPADKGQA 517
           I  LAA          G + FY+ G +H  + I      L++ I   +S    P +K Q+
Sbjct: 236 IPGLAAKSGFLFIKALGNVGFYVDGSIHWDIAILVAGFGLTLVISQVLSGRGMPVNKQQS 295

Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558
                 PV+       FP  AG+++Y   +N+   +Q  ++ +
Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVIANIFQGLQTFLLSR 338



 Score = 51.1 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             +  ++ +FY LV ++G+AI+  T+ ++L  FPL+     S   MK  QP + + + + 
Sbjct: 8   NLLIPILDFFYGLVPSYGLAIVALTIVIRLALFPLSAGSIRSARRMKIAQPVMQKRQAEI 67

Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           K      PQ  Q+ + +L      +PLAGC P+++Q+P+ FA++  +  S
Sbjct: 68  KSRYASNPQKQQEELGKLMGEFG-SPLAGCLPLIVQMPILFALFATLRGS 116


>gi|318057143|ref|ZP_07975866.1| hypothetical protein SSA3_04345 [Streptomyces sp. SA3_actG]
 gi|318080025|ref|ZP_07987357.1| hypothetical protein SSA3_25903 [Streptomyces sp. SA3_actF]
          Length = 281

 Score = 58.5 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 20/213 (9%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I++ T  V+LL  PL++           + P+I  LR K+ ++P   +Q+A+ +L+  H 
Sbjct: 41  IVVLTACVRLLLLPLSRTAARGQRERAGLAPEIAALRRKYAKNPE-RMQRALTELHAEHG 99

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT--LFGILP 481
           ++PL GC P+L Q+P FF +Y V S S  +   P       L AA     +   L    P
Sbjct: 100 VSPLGGCLPMLCQLPFFFVLYHVFSSS-RIGGEPNRLLPHRLFAAPLGGHWGDALAHGGP 158

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMK--------MSPPPADKGQA-----MILNWMPVV-- 526
           F   G ++V ++ ++ +++ F   +         +P  A  GQ       +  +MP +  
Sbjct: 159 FGERGLVYVALFALVAAVATFTVRRNKRQLAGADTPLAAAGGQQVPGVGALTRFMPYMAY 218

Query: 527 FVFALSS-FPAGLIIYWSWSNVISIVQQAVIMK 558
           F     +  P    +Y   S   S V++AV+ +
Sbjct: 219 FTLISVAVVPLAGALYIVTSTTWSAVERAVLYR 251


>gi|284052519|ref|ZP_06382729.1| putative inner membrane protein translocase component YidC
           [Arthrospira platensis str. Paraca]
 gi|291572001|dbj|BAI94273.1| putative inner membrane protein [Arthrospira platensis NIES-39]
          Length = 390

 Score = 58.5 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 7/102 (6%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DKGQAMILNWMPVVFV--FAL 531
           G           +    +   +S++I   +S        +  Q  +    PV+F   F  
Sbjct: 257 GAFDDDGNIHWDIVGMILGFGISLYINQVLSGQNQAGSGNPQQDTVNKITPVLFTGMFFF 316

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
              PAG+++Y   +N+    Q A I+        L   +  +
Sbjct: 317 FPLPAGVLLYMLIANIFQTGQ-AFILSREPLPENLQKIVEES 357



 Score = 53.5 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 65/120 (54%), Gaps = 4/120 (3%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL---AKKQYVSTANMK 390
           +D+G  +     M  ++ +FY +V ++G+AI+  T+ ++   +PL   + +        +
Sbjct: 1   MDFGIGFLSNNLMLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSIRNMRRMKVTQ 60

Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
            +  +  +  +K  +  P   ++ M ++YK    NPLAGC+P+LLQ+P+ FA++  +  S
Sbjct: 61  PLMKERVDKIQKLYKDDPVKQREEMSRVYKELG-NPLAGCFPLLLQMPILFALFATLRGS 119


>gi|238566367|ref|XP_002386052.1| hypothetical protein MPER_15880 [Moniliophthora perniciosa FA553]
 gi|215436820|gb|EEB86982.1| hypothetical protein MPER_15880 [Moniliophthora perniciosa FA553]
          Length = 202

 Score = 58.5 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 18/164 (10%)

Query: 339 FYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
            +  A     +++  + L  V  +G  I+LT +  ++  FP A +     + +  +QP+I
Sbjct: 39  NWNPAGLYRWVLAQIHFLNPVLPWGYTIILTALLFRVATFPFAVRSIRFASRVTPLQPRI 98

Query: 397 DELREKFKQSPPQVLQ-------KAMIQLYKTHNINPLAGCWPILLQIPV----FFAIYK 445
           +EL E+ ++   +          +   Q++K   ++PL G    L+QIPV    FF I  
Sbjct: 99  NELNEQMREMAEKRDMVGLQRIRQEQFQVFKDAGVHPLGGAVSGLVQIPVAIGGFFGIKN 158

Query: 446 VISIS---LEMRHAPFWGW--IKDLAAADPTNIFTLFGILPFYL 484
           +++      +++H   + W  I DLAA DPT +  +   + F  
Sbjct: 159 MLTEPTVVTQLQHNTGFEWMGITDLAATDPTGVLPVAFGVMFSG 202


>gi|284928889|ref|YP_003421411.1| YidC/Oxa1 family, membrane protein insertase [cyanobacterium
           UCYN-A]
 gi|284809348|gb|ADB95053.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain
           protein [cyanobacterium UCYN-A]
          Length = 378

 Score = 58.5 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 2/119 (1%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY +V ++G +I+  T+ ++L  +PL+  Q  +   MK  Q
Sbjct: 1   MDFGIGFISTNIMLPILDFFYGIVPSYGFSIIALTLVIRLALYPLSAGQIRNMRKMKITQ 60

Query: 394 PKIDELREKFKQS--PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + E +E+ ++        Q+  +        NPLAGC P++LQ+P+ FA++  +  S
Sbjct: 61  PLMKERQEEIQRRYKDDSAKQQEEMGKLMKEFGNPLAGCLPLVLQMPILFALFATLRGS 119



 Score = 47.7 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 9/108 (8%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--MILNWMPVVFVFALSSFP 535
           G++         +    +    S+++  ++S       Q    I    P++F      FP
Sbjct: 257 GVMGEDGNINWDILAMILFFGASIYVNQELSGSSGGGQQQQQAITKITPILFSGMFLFFP 316

Query: 536 --AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             AG+++Y   +NV   +Q  ++M+       L D L+    +    +
Sbjct: 317 LPAGVLMYIVVANVFQTLQSLILMR-----EPLPDNLQKLVDEQKKEE 359


>gi|158336230|ref|YP_001517404.1| putative inner membrane protein translocase component YidC
           [Acaryochloris marina MBIC11017]
 gi|158306471|gb|ABW28088.1| inner membrane protein OxaA, putative [Acaryochloris marina
           MBIC11017]
          Length = 404

 Score = 58.1 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 519 ILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
           +  +MPV+F      FP  AG+++Y   +N+   VQ   + K       L   +     K
Sbjct: 313 MNKYMPVMFSGMFLFFPLPAGVLLYMLLANIFQTVQSYFLSK-EPLPENLQKIVDEQERK 371

Query: 577 NYNSQ 581
               +
Sbjct: 372 KAKEE 376



 Score = 53.1 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 66/110 (60%), Gaps = 4/110 (3%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
             M  ++ +FY +V ++G+AI+  T+ ++ + +P++  Q  +   MK  QP + + +++ 
Sbjct: 10  NIMLPILDFFYGIVPSYGLAIVALTLVIRSVLYPVSAGQIRNMRRMKVSQPVMQKRQKEL 69

Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           ++     P  LQ+   +L+K    NPLAGC+P+L+Q+P+ FA++  +  S
Sbjct: 70  QERYKDDPAKLQEEQTKLFKEFG-NPLAGCFPLLIQMPILFALFATLRGS 118


>gi|50365496|ref|YP_053921.1| putative inner membrane protein translocase component YidC
           [Mesoplasma florum L1]
 gi|50364052|gb|AAT76037.1| predicted inner membrane protein [Mesoplasma florum L1]
          Length = 418

 Score = 58.1 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 81/211 (38%), Gaps = 16/211 (7%)

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVL 411
              +   AI+ T + +K +      K  V+    +  Q K  +++ K+K        Q +
Sbjct: 179 YGVSVIFAILFTVIIIKSISLAFTWKSQVNQHKQQAFQLKQADIQAKYKGDKSPQARQKM 238

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA--PFWGWIKDLAAAD 469
              M  L K    +P +        +P  FAIY ++  +  ++ A       I+   +  
Sbjct: 239 SAEMQALQKKEGFSPFSSMAGAFASMPFLFAIYAIVRSTKSLKIANVGMIALIEKPWSQM 298

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIM------SLSMFIQMKMSPPPADKGQAMILNWM 523
                    +L  YLP  +   + P+++      S+++    + S       Q +     
Sbjct: 299 LNGEVIYLSLLAVYLPLQIISMLLPLVLQSIKQKSITLTEAQRKSRKKQFIMQGVFAFV- 357

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
              F+F ++S  +G+ IYW +S+   I+Q  
Sbjct: 358 ---FIFVVASVASGVAIYWIFSSTFQIIQTL 385


>gi|213422210|ref|ZP_03355276.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E01-6750]
          Length = 64

 Score = 58.1 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 21/26 (80%)

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558
            FP+GL++Y+  SN+++I+QQ +I +
Sbjct: 5   WFPSGLVLYYIVSNLVTIIQQQLIYR 30


>gi|294629545|ref|ZP_06708105.1| preprotein translocase YidC subunit [Streptomyces sp. e14]
 gi|292832878|gb|EFF91227.1| preprotein translocase YidC subunit [Streptomyces sp. e14]
          Length = 242

 Score = 58.1 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 55/244 (22%), Positives = 106/244 (43%), Gaps = 23/244 (9%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
              F F A+ +  L      +    +   AI+L T  V+LL  PL++           ++
Sbjct: 1   MSVFPFFARLVEQLAELLQPVFHASSAAAAIVLFTACVRLLVHPLSRAAVRGQKAQAALR 60

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           P+I ELREK  ++P   LQKA+++L+    ++PL+GC P LLQ+P FF +Y  +  S  +
Sbjct: 61  PRIAELREKHAKNPG-RLQKALVELHAEEKVSPLSGCLPNLLQLPAFFLLYH-LFSSTAI 118

Query: 454 RHAPFWGWIKDLAAADPTNIFT--LFGILPFYLPGFMHVGIWPIIMSLSMFIQMK----- 506
                      L AA     ++  L     F   G ++VG++ ++ +++ F  ++     
Sbjct: 119 GGDGNGLLSHRLFAAPLGGRWSDALADGGVFGAAGIVYVGLFAVVAAVATFSFLRARRAA 178

Query: 507 ------------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
                         P P       +  ++ +  +  ++  P    +Y   S   + V++A
Sbjct: 179 AGGDTGGAALGGGEPVPGLAAVGKVAPFLSLGTLVTVAVVPLAAALYVVTSTAWTAVERA 238

Query: 555 VIMK 558
           ++ +
Sbjct: 239 LLTR 242


>gi|167555045|ref|NP_001107941.1| mitochondrial inner membrane protein COX18 [Danio rerio]
 gi|160774039|gb|AAI55288.1| Zgc:174864 protein [Danio rerio]
          Length = 328

 Score = 58.1 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 78/246 (31%), Gaps = 48/246 (19%)

Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST-------------ANMKNIQPK 395
           L+S        +  +I+ TT+ ++                              +     
Sbjct: 64  LLSVQQLTGLPWWSSIICTTLALRCSITLPLAIYQAHIIAKIEALQKEIAAFAQQLRFEI 123

Query: 396 IDELREK------FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
               +EK       +    + L++ + +LY   N +P      I +Q+P++  +   +  
Sbjct: 124 SVRAKEKNWTEQTCRFHFKKNLRRIVSELYVRENCHPFKASVLIWVQLPMWVCVSLALRN 183

Query: 450 -SLEMRH--------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
            SL + +        A    W  DL   D T I  +   +   L   +            
Sbjct: 184 LSLGLGNTDVSAGLAAGGALWFPDLTVPDSTWIMPVSLGIINLLITEIFA---------- 233

Query: 501 MFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
                 +    + K Q    +++    V+ +   ++ P+ + +YW  S+ + +    ++ 
Sbjct: 234 ------LRQTESSKMQKYATHFIRGISVLMIPIAATVPSSMCVYWLSSSCVGLAHNLLL- 286

Query: 558 KMHGAE 563
           +  G  
Sbjct: 287 RSPGVR 292


>gi|298707359|emb|CBJ30003.1| Oxa1-like homolog, mitochondrial inner membrane insertase
           [Ectocarpus siliculosus]
          Length = 260

 Score = 58.1 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 71/219 (32%), Gaps = 32/219 (14%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +   I + T+ VK+   P+   Q      M+   P+I  LR     S  ++ Q+ +++ +
Sbjct: 22  WWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEEIPQERVLERW 81

Query: 420 KTHNI--------------NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465
           + + +              +        L+ +PVF      I   L     P      D 
Sbjct: 82  RKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGL----DT 137

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525
             AD  +   L  I        + +           F Q        D  Q  I+  +P 
Sbjct: 138 GEADTVHSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQ--------DGMQTFIILMLPW 189

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           V       FP G+ +YW  S V  + Q    MK +    
Sbjct: 190 VST-----FPQGVFMYWIPSAVFQMGQTY-TMKNNKVRE 222


>gi|331092108|ref|ZP_08340939.1| hypothetical protein HMPREF9477_01582 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330402309|gb|EGG81880.1| hypothetical protein HMPREF9477_01582 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 420

 Score = 57.7 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 10/89 (11%)

Query: 494 PIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
           PI+  L+ +I +K++           P      M+   MP++ VF   +F AGL +YW  
Sbjct: 258 PILSGLTQWISIKLTSTASATQTADNPMASQMKMMNVMMPMLSVFMCFTFQAGLGLYWIA 317

Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           S V+  VQQ +I K H  +I + D +   
Sbjct: 318 SAVVRCVQQLIINK-HLEKISVDDLIAQN 345



 Score = 40.7 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPL 427
             L  PL  KQ   +     + P+I  +++K+K    Q     +Q+    +Y  +  +P 
Sbjct: 53  YTLLIPLTIKQQKFSKMSAAMNPEIQAIQKKYKGKRDQTSVLKMQEETQMVYDKYGTSPT 112

Query: 428 AGCWPILLQIPVFFAIYKVISI 449
            GC  +L+Q P+   +++VI  
Sbjct: 113 GGCGSLLIQFPILLGLWQVIQN 134


>gi|301790367|ref|XP_002930388.1| PREDICTED: mitochondrial inner membrane protein COX18-like
           [Ailuropoda melanoleuca]
 gi|281350691|gb|EFB26275.1| hypothetical protein PANDA_020824 [Ailuropoda melanoleuca]
          Length = 336

 Score = 57.7 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 65/163 (39%), Gaps = 31/163 (19%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----------SLEMRHAP 457
           + +++ + +LY   N +P      + +Q P++  +   +             S++ + A 
Sbjct: 153 KNMRRLVSELYVRDNCHPFKATVLVWIQFPMWIFMSVALRNFSTGATHSEGFSVQEQLAT 212

Query: 458 F-WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
               W  DL A D T I              + +GI  ++  + +F   K+        Q
Sbjct: 213 DGILWFPDLTALDSTWILP------------ISIGIVNLL-IVEIFALQKIGMSR---FQ 256

Query: 517 AMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             I  ++    V+ +   ++ P+ + +YW  S+++ + Q  ++
Sbjct: 257 TYITYFVRVVSVLMIPVAATVPSSIGLYWLCSSLMGLSQNLLL 299


>gi|306837145|ref|ZP_07470082.1| membrane protein OxaA [Corynebacterium accolens ATCC 49726]
 gi|304566993|gb|EFM42621.1| membrane protein OxaA [Corynebacterium accolens ATCC 49726]
          Length = 314

 Score = 57.7 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 47/282 (16%), Positives = 96/282 (34%), Gaps = 40/282 (14%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
            F     P+  +M +++ L+G+       + ++I+L  + V+ +  PL      S     
Sbjct: 1   MFEVFMYPVSGIMKFWHWLIGSFVDEPTAWLVSIILLVITVRGIVSPLNWMALRSGRISV 60

Query: 391 NIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            ++P+   + E+   +               L K++N  P AGC P L+ IP F  +Y+V
Sbjct: 61  LMRPESTRINEQMNHAETTEEMAELIQKQQDLSKSYNYKPAAGCIPPLITIPAFLGLYQV 120

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL------- 499
           I     +        + D          T  G+            + PI+ +        
Sbjct: 121 ILRMSNIEQGSSTVGMLDAGDVAAFRETTYSGVPITDFARDHGDLLNPIVFAAIAFTLAN 180

Query: 500 ----------SMFIQMKMSPPPADKGQAMILNWMPVVFVFA--LSSFPAGLIIYWSWSNV 547
                     +     K++         ++    P++  +       P  +I+YW W+ +
Sbjct: 181 SIISVVRSFLTTQFDQKVNRRIFIIIGILL-IVAPILLWYLAHSGPLPVAIILYWGWAYL 239

Query: 548 ISIVQQAV--IM--KMHGAEIGLIDRLRS-----TFSKNYNS 580
            ++VQ  V  IM  K +     + +  R             +
Sbjct: 240 FTLVQTIVFEIMLHKRYPLTEEVHEMRRESIRAWRQKNKKPA 281


>gi|221091348|ref|XP_002154153.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 230

 Score = 57.7 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 72/184 (39%), Gaps = 33/184 (17%)

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---------S 450
           +++ +Q   + + K   ++YK ++I+ +       +Q+P +  +   +           +
Sbjct: 40  KKRMQQDFRKEIAKRTSEIYKKNDISLMQFIMLPWIQVPTWITLSLALRNISGCRLQNET 99

Query: 451 LEMRHAPF-------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
           +++ + P          W +DL+ +DP  I      +PF +       I    M    F 
Sbjct: 100 IDVIYMPSEGITTEGLLWFQDLSVSDPFYI------IPFIILFVNIANIEINTMRAQGFW 153

Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
              + P         IL  + V+  F  S  P+ +  YW  S++  ++Q  VI+K+    
Sbjct: 154 -KYLKP---------ILRLVAVLTAFISSQVPSAMSFYWCTSSICGLIQN-VILKIPSVR 202

Query: 564 IGLI 567
             L 
Sbjct: 203 RKLD 206


>gi|333024766|ref|ZP_08452830.1| putative preprotein translocase YidC subunit [Streptomyces sp.
           Tu6071]
 gi|332744618|gb|EGJ75059.1| putative preprotein translocase YidC subunit [Streptomyces sp.
           Tu6071]
          Length = 281

 Score = 57.7 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 22/214 (10%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I++ T  V+LL  PL++           + P+I  LR K+ ++P   +Q+A+ +L+  H 
Sbjct: 41  IVVLTACVRLLLLPLSRTAARGQRERAGLAPEIAALRRKYAKNPE-RMQRALTELHAEHG 99

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA---DPTNIFTLFGIL 480
           ++PL GC P+L Q+P FF +Y V S S  +   P       L AA   D        G  
Sbjct: 100 VSPLGGCLPMLCQLPFFFVLYHVFSSS-RIGGEPNRLLPHRLFAAPLGDRWADALAHGG- 157

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMK--------MSPPPADKGQA-----MILNWMPVV- 526
           PF   G ++V ++ ++ +++ F   +         +P  A  GQ       +  +MP + 
Sbjct: 158 PFGERGLVYVALFALVAAVATFSVRRNKRQLAGADTPLAAAGGQQVPGVGALTRFMPYMA 217

Query: 527 -FVFALSS-FPAGLIIYWSWSNVISIVQQAVIMK 558
            F     +  P    +Y   S   S V++AV+ +
Sbjct: 218 YFTLISVAVVPLAGALYIVTSTTWSAVERAVLYR 251


>gi|170595403|ref|XP_001902369.1| 60Kd inner membrane protein [Brugia malayi]
 gi|158590000|gb|EDP28784.1| 60Kd inner membrane protein [Brugia malayi]
          Length = 399

 Score = 57.3 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 91/302 (30%), Gaps = 36/302 (11%)

Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA--GAKEFPTIHHYEKDL 325
                S  K +               +  +P +++ ++ F F      +   +  +    
Sbjct: 42  GVRHASTAKDIFVVSNDSLTGIPDIPVINMPPEAVASSGFSFYEKWLLKVDILDLFGLS- 100

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
            I   E    + W+   +     L     +    +  +I+ TT+ ++L F          
Sbjct: 101 GISAVESTGLFSWYSPASWYRIALEFIHNHFDLPWFASIICTTLCLRLAFLRATLFLQRF 160

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK--------THNINPLAGCWPILLQI 437
                     +    +K K++   +  +A+ +           T+N+      +   L  
Sbjct: 161 APMKMMHDDTLKMFDDKKKEAREVIRSEALYRKISHDENIYVDTYNLRSSNRYYYFALNS 220

Query: 438 PVFFAIYKVISISLEMRHAPF----WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
            +F + Y+ I +  E     +      W  DL   DP  +                    
Sbjct: 221 VLFISQYRGIILMAENNFPGWDTGGALWFLDLTTTDPNFLVPALSS-------------- 266

Query: 494 PIIMSLSMFIQMKMSPPPADKGQA--MILNWM--PVVFVFALSSFPAGLIIYWSWSNVIS 549
            +++  ++F+     P              ++  P+   F  S  P  + IYW  SN  +
Sbjct: 267 -VLIGCTLFL--GYDPTGTASANKYVKAFKYVAVPLGVFFFSSRVPVAVSIYWCASNFFN 323

Query: 550 IV 551
           ++
Sbjct: 324 LL 325


>gi|328867927|gb|EGG16308.1| putative oxidase assembly protein [Dictyostelium fasciculatum]
          Length = 407

 Score = 57.3 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 79/214 (36%), Gaps = 34/214 (15%)

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-----VLQK 413
           ++ + + + T+ ++   FP A KQ V+ A +  I+P++DE +   K++  +         
Sbjct: 151 SWLVIVPVYTLLLRSALFPFAIKQRVNVARIMEIRPQLDEFKRISKENRAKGISNYENSN 210

Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE----MRHAPFWGWIKDLAAAD 469
            +  L K    +P       L  +P F +    I    E    ++ A    W  DL+  D
Sbjct: 211 KITALLKEKKCHPALSYIFPLANLPFFISTILAIRGMAETFPSLKDAG-MLWFTDLSIPD 269

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM----PV 525
            T                    I P+  S+      ++S   +D      L+W      +
Sbjct: 270 STY-------------------ILPVTCSVLYLAINELSLAKSDSLILKTLSWFARALSI 310

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
             +    + P  +  YW  S++ ++ Q   + K 
Sbjct: 311 AIIPFSYTIPNLVYFYWIPSSLFTLGQ-LFVFKS 343


>gi|170043998|ref|XP_001849650.1| inner membrane protein COX18, mitochondrial [Culex
           quinquefasciatus]
 gi|167867261|gb|EDS30644.1| inner membrane protein COX18, mitochondrial [Culex
           quinquefasciatus]
          Length = 340

 Score = 57.3 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 85/277 (30%), Gaps = 47/277 (16%)

Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362
           T T+     ++  P  +  +  + I  F  L  W         M  L++    +  N  +
Sbjct: 45  TVTSLWTTMSQSTPVAYVQQGLVNIHDFTGLPWWASVILSTVLMRSLVTLPLAIYQNKIV 104

Query: 363 -----AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417
                  +     VK L    A          +  +   +   +K              +
Sbjct: 105 ARLEKISLEMPEIVKGLKLETAYAIKKYNWTEQEARITYNRSLKKQWD-----------K 153

Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI---- 473
           L    N +P      +  QIP++  +       + M               DP +I    
Sbjct: 154 LVIRENCHPAKTMIVLWGQIPLWVMMSVSFRNMVHM-------------LPDPGSIEAQI 200

Query: 474 ------FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP----ADKGQA---MIL 520
                    FG +P  L    H  I P+ M L     +++        + K Q     + 
Sbjct: 201 TFTELTLGGFGWIP-NLTEVDHSLILPVAMGLINLAIIEIQNAARTRESSKLQRIFTNVF 259

Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
             + V+ V   ++ P+ L +YW  S+   + Q  ++M
Sbjct: 260 RGLSVLMVPIAATVPSCLSLYWVTSSAYGLCQNLMLM 296


>gi|167933014|ref|ZP_02520101.1| hypothetical protein cdivTM7_00209 [candidate division TM7
           single-cell isolate TM7b]
          Length = 163

 Score = 57.3 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 37/118 (31%), Gaps = 27/118 (22%)

Query: 489 HVGIWPIIMSLSMFIQMKMSPPPAD-------------------------KGQAMILNWM 523
            +    I   +  +I  K + P                                 ++ +M
Sbjct: 5   LLLALAIGAGIMQYISSKQTMPQKQTKKGLRQIMAEAAEGKEADSSEMNAAVMQKMVKFM 64

Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
           P++    + + P  + +Y      +++VQQ  ++K    E  L D    +  K   S+
Sbjct: 65  PIMLTLIMVNLPGAIALYSCTFTAVAVVQQHFLLKK--DEDELQDMADKSTLKKRVSK 120


>gi|295666918|ref|XP_002794009.1| inner membrane protein OXA1 [Paracoccidioides brasiliensis Pb01]
 gi|226277662|gb|EEH33228.1| inner membrane protein OXA1 [Paracoccidioides brasiliensis Pb01]
          Length = 644

 Score = 57.3 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 83/241 (34%), Gaps = 37/241 (15%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390
             I   + +  ++ +  ++   +   G   +   + T V +++     A     ++A + 
Sbjct: 278 KAIGLDYGWGPSRLIETILESLHIHGGLPWVGATITTAVLLRVAMLKFAIDASDTSAKVA 337

Query: 391 NIQPKIDELREKFKQS-PPQVLQKAMIQLYKTHNINP-----LAGCWPILLQIPVFFAIY 444
           +++     ++E+ K+             L     IN      L      ++QIP+ F  +
Sbjct: 338 SVKHLTQPIQEEVKRCYRENDTIGMQRALSTRRIINENYNIKLMKLAYPMIQIPLNFGAF 397

Query: 445 KVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
           +V+     +      +  + W+  +   DP                     I P+   L 
Sbjct: 398 RVLRGMSALPVPGLDSESFLWLSSVTVHDPLF-------------------ILPVSTGLL 438

Query: 501 MFIQMKMS---PPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
           M    K+        D+        +L  +PV+        P  L I+++ ++V++I+Q 
Sbjct: 439 MHYTFKLGGEVSASTDQTAMAARPLLLYGLPVLSTVCTLFLPGILQIFFASTSVLAILQS 498

Query: 554 A 554
            
Sbjct: 499 Y 499


>gi|316968526|gb|EFV52796.1| conserved hypothetical protein [Trichinella spiralis]
          Length = 296

 Score = 57.3 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/202 (11%), Positives = 63/202 (31%), Gaps = 19/202 (9%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            Y  +  + ++++  ++  G    A +   +        L          +     +   
Sbjct: 55  SYSPSGLVQLMLNSIHDNFGVPWWASIFLFMIYSQRNSALMSNFTEGLGKLNKNLIEARI 114

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMR 454
            R++F +    +  +  ++ +K   +         ++Q  +F     A+  +    +   
Sbjct: 115 RRDRFSEELAMLELQDYMKEHKAAQLY-GRMFAISMIQGSIFLTYFLALRGMSYAPVMSM 173

Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
               + WI D+   DP  I  L     +     + +    +   +S     K        
Sbjct: 174 TQSGFLWITDMTLPDPAWILPL-----YSSLSVLIILELGLETGVSTDSMSKF------- 221

Query: 515 GQAMILNWMPVVFVFALSSFPA 536
               ++  MP+   F +  +P+
Sbjct: 222 --KWVMRVMPIGMFFFIKDYPS 241


>gi|311262330|ref|XP_003129127.1| PREDICTED: mitochondrial inner membrane protein COX18-like [Sus
           scrofa]
          Length = 336

 Score = 56.9 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 64/192 (33%), Gaps = 32/192 (16%)

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
                      ++       ++  +    + ++K + +LY   N +P      + +Q+P+
Sbjct: 124 NISRHLNQEVAVRAHQLGWSKRAARLTYLKTMRKLVSELYVRDNCHPFKATVLVWIQLPM 183

Query: 440 FFAIYKVISISLEMRHAPF------------WGWIKDLAAADPTNIFTLFGILPFYLPGF 487
           +  +   +      +                  W  DL A D T I              
Sbjct: 184 WIFMSVALRNLSTGKTQSEGLSVQEQLATGGVLWFSDLTAVDSTWIL---------PVSV 234

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSW 544
             + +  +     +F   K+      + Q  +  ++    V+ +   ++ P+ +++YW  
Sbjct: 235 GVINLLIV----EIFALQKI---GTSRFQTYVTYFVRAVSVLMIPIAATVPSSIVLYWLC 287

Query: 545 SNVISIVQQAVI 556
           S+ + + Q  ++
Sbjct: 288 SSFVGLSQNLLL 299


>gi|195374958|ref|XP_002046270.1| GJ12599 [Drosophila virilis]
 gi|194153428|gb|EDW68612.1| GJ12599 [Drosophila virilis]
          Length = 349

 Score = 56.9 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 71/245 (28%), Gaps = 34/245 (13%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
             G  ++ A  +   +      +        +T    ++     A            +  
Sbjct: 79  YSGLPWWAAIVLSTFLFRSVVTLPLTIYQHKITARIEQIALEMPA--IVEELKREAAMAK 136

Query: 395 KIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
           +  +  +K  Q   +   K   Q L    N +P+     +  QIP++      +   + M
Sbjct: 137 QKFKWSDKQTQIVYRRSIKKQWQNLIVRDNCHPMKTVIVLWGQIPLWIFQSVALRNLVYM 196

Query: 454 RHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
              P                 GWI +L   D + I           P  + +    I+  
Sbjct: 197 LPDPTTLKAQIIATELTIGGIGWIPNLTVVDSSYIL----------PVTLGLINLAIVEL 246

Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-- 556
            +M       P             + V+ V    + P+ L +YW  S+   + Q  ++  
Sbjct: 247 QTM--TRTRPPTRLQNIANNCFRGLSVLMVPVACTVPSALCVYWVASSSFGLAQNLLLLS 304

Query: 557 --MKM 559
             M+ 
Sbjct: 305 PEMRR 309


>gi|227501853|ref|ZP_03931902.1| possible inner membrane protein translocase component YidC
           [Corynebacterium accolens ATCC 49725]
 gi|227077347|gb|EEI15310.1| possible inner membrane protein translocase component YidC
           [Corynebacterium accolens ATCC 49725]
          Length = 314

 Score = 56.9 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 100/272 (36%), Gaps = 35/272 (12%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390
            F     P+  +M +++ L+G+       + ++I+L  + V+ +  PL      S     
Sbjct: 1   MFEVFMYPVSGIMKFWHWLIGSFVDESTAWLVSIILLVITVRGIVSPLNWMALRSGRISV 60

Query: 391 NIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            ++P+   + E+   +               L K++N  P AGC P L+ IP F  +Y+V
Sbjct: 61  LMRPESTRINEQMNHAETTEEMAELIQKQQDLSKSYNYKPAAGCIPPLITIPAFLGLYQV 120

Query: 447 ISISLEMRHAPFWGWI---KDLAAADPTNIFTLF----------GILPFYLPGFMHVGIW 493
           I     +        +    D+AA   T    +            + P  +         
Sbjct: 121 ILRMSNIEQGSSTVGMLDAADVAAFRETTYSGVPITDFARDHGDLLNPIVIAAIAFTLAN 180

Query: 494 PIIMSLSMFIQ----MKMSPPPADKGQAMILNWMPVVFVFA--LSSFPAGLIIYWSWSNV 547
            II  +  F+      K++         ++    P++  +       P  +I+YW W+ +
Sbjct: 181 SIISVVRSFLTTQFDQKVNRRIFIIIGILL-IVAPILLWYLAHSGPLPVAIILYWGWAYL 239

Query: 548 ISIVQQAV--IM--KMHGAEIGLIDRLRSTFS 575
            ++VQ  V  IM  K +     + +  R +  
Sbjct: 240 FTLVQTIVFEIMLHKRYPLTEEVHEMRRESIR 271


>gi|225683560|gb|EEH21844.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 505

 Score = 56.9 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 83/241 (34%), Gaps = 37/241 (15%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390
             I   + +  ++ +  ++   +   G   +   + T V +++     A     ++A + 
Sbjct: 148 KAIGLDYGWGPSRLIETILESLHIHGGLPWVGATITTAVLLRVAMLKFAIDASDTSAKVA 207

Query: 391 NIQPKIDELREKFKQS-PPQVLQKAMIQLYKTHNINP-----LAGCWPILLQIPVFFAIY 444
           +++     ++E+ K+             L     IN      L      ++QIP+ F  +
Sbjct: 208 SVKHLTQPIQEEVKRCYRENDTIGMQRALSARRIINENYNIKLMKLAYPMIQIPLNFGAF 267

Query: 445 KVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
           +V+     +      +  + W+  +   DP                     I P+   L 
Sbjct: 268 RVLRGMSALPVPGLDSESFLWLSSVTVHDPLF-------------------ILPVSTGLL 308

Query: 501 MFIQMKMS---PPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
           M    K+        D+        +L  +PV+        P  L I+++ ++V++I+Q 
Sbjct: 309 MHYTFKLGGEVSASTDQTAMAAKPLLLYGLPVLSTVCTLFLPGILQIFFASTSVLAILQS 368

Query: 554 A 554
            
Sbjct: 369 Y 369


>gi|66811452|ref|XP_639906.1| hypothetical protein DDB_G0284883 [Dictyostelium discoideum AX4]
 gi|60466861|gb|EAL64905.1| hypothetical protein DDB_G0284883 [Dictyostelium discoideum AX4]
          Length = 396

 Score = 56.9 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 84/229 (36%), Gaps = 31/229 (13%)

Query: 345 PMFMLMSYFYNLVGNFGIAIM-LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
            + + ++  ++L     + I+ + T+F++   FPL+ K  +++  +  I+P++D+ +E+ 
Sbjct: 133 FIEVCLNQLHHLTSLPWLVIVPVFTLFIRSALFPLSIKHRINSMRLLEIRPQLDKFKEQQ 192

Query: 404 KQSPPQV--------LQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISL 451
           K +              + +  L K    +P+      +  +P       A   + +   
Sbjct: 193 KINRKNKASIQVRAQTSQKITTLLKEKGCHPVLSYILPMANLPFLISSIIAFRDMAANYP 252

Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI-IMSLSMFIQMKMSPP 510
            ++ A    W  DL+ +DP  +  +     + +   +        +M    ++       
Sbjct: 253 SLKDAG-MLWFTDLSQSDPIFVLPVICSSLYLIATELAFSKNTNPLMVALKWVS------ 305

Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
                       M ++ +    + P+   +YW  S + +I Q       
Sbjct: 306 ----------RGMSLLLIAFSPTIPSICYLYWIPSGLFTIAQSLAFNSK 344


>gi|260948072|ref|XP_002618333.1| hypothetical protein CLUG_01792 [Clavispora lusitaniae ATCC 42720]
 gi|238848205|gb|EEQ37669.1| hypothetical protein CLUG_01792 [Clavispora lusitaniae ATCC 42720]
          Length = 337

 Score = 56.9 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 66/207 (31%), Gaps = 19/207 (9%)

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
              + P      E+      +  +K   +L++ H +      +    QIP++  +     
Sbjct: 124 ASMVSPLRKMKYEEIMVLSTKETRKRQKKLFRDHGVQLYKNLFLPAAQIPLWVCMSLTFR 183

Query: 449 I---------------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
                              + H     W  DL  +DP +IF L   +   +        +
Sbjct: 184 NLSGWSTWDSLANKPLDASLYHEG-ILWFTDLTTSDPLHIFPLAVGIVALVNVEWTFKTF 242

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            ++ + S   +  + P   D   A +     V  +      P  L +YW  S V S+VQ 
Sbjct: 243 NLMRAGS--RRANLRPTLTDSM-ANVSRMAVVFLMAISLHAPTALTLYWLSSQVFSLVQN 299

Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNS 580
             +            RL  T SK  ++
Sbjct: 300 VFLDLFLPISFTPHKRLDHTRSKRPDA 326


>gi|72081003|ref|YP_288061.1| putative inner membrane protein translocase component YidC
           [Mycoplasma hyopneumoniae 7448]
 gi|71914127|gb|AAZ54038.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448]
          Length = 609

 Score = 56.9 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 103/327 (31%), Gaps = 29/327 (8%)

Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325
                   + + +  G+A    K               T ++          I    K  
Sbjct: 278 KSGKDVSPETEKILSGYANLVKKLVFPTNFSRIDIQNKTYSWNNNDESAAKNIAFQNKIP 337

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV----------GNFGIAIMLTTVFVKLLF 375
           A P       W    F A  ++ L      +               ++I+   VF K++ 
Sbjct: 338 AFPIVSWAESWKLGPFYAIFVYPLSKIILWVTASQSLYEWSGWITILSILAVVVFTKIIS 397

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSP-----PQVLQKAMIQLYKTHNINPLAGC 430
           F    K          +Q K  ++  K++         Q  ++ ++ LYK +N +P +  
Sbjct: 398 FIFRFKTIFGQNKQMELQLKKAKIDAKYENYKKNKVMQQRHRQEIVDLYKKNNFSPFSPF 457

Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
             IL+ +P+F A+++ +      +      +   L  A  +      G   +     + V
Sbjct: 458 SQILVTMPIFIAVWRALQGIPSFK----VTYFLGLELAATSYQKLFEGYWIYLPIIIVTV 513

Query: 491 GIWPIIMSLSMFIQMKMSPPPAD-------KGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
            +  +   +   +  K S    +       K Q      + ++F+F    F A L IYW 
Sbjct: 514 LVQALQQIIPKILNKKKSNRIMNVQENETLKKQQKTQRIVSIIFIFFGVIFQASLQIYWI 573

Query: 544 WSNVISIVQQ---AVIMKMHGAEIGLI 567
              +  I+Q      + K +     + 
Sbjct: 574 IGGIWEILQTLGIFYLQKSNFYREKMR 600


>gi|54020659|ref|YP_116204.1| putative inner membrane protein translocase component YidC
           [Mycoplasma hyopneumoniae 232]
 gi|71894022|ref|YP_279468.1| putative inner membrane protein translocase component YidC
           [Mycoplasma hyopneumoniae J]
 gi|53987832|gb|AAV28033.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232]
 gi|71852149|gb|AAZ44757.1| conserved hypothetical protein [Mycoplasma hyopneumoniae J]
          Length = 609

 Score = 56.5 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 103/327 (31%), Gaps = 29/327 (8%)

Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325
                   + + +  G+A    K               T ++          I    K  
Sbjct: 278 KSGKDVSPETEKILSGYANLVKKLVFPTNFSRIDIQNKTYSWNNNDESAAKNIAFQNKIP 337

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV----------GNFGIAIMLTTVFVKLLF 375
           A P       W    F A  ++ L      +               ++I+   VF K++ 
Sbjct: 338 AFPIVSWAESWKLGPFYAIFVYPLSKIILWVTASQSLYEWSGWITILSILAVVVFTKIIS 397

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSP-----PQVLQKAMIQLYKTHNINPLAGC 430
           F    K          +Q K  ++  K++         Q  ++ ++ LYK +N +P +  
Sbjct: 398 FIFRFKTIFGQNKQMELQLKKAKIDAKYENYKKNKVMQQRHRQEIVDLYKKNNFSPFSPF 457

Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
             IL+ +P+F A+++ +      +      +   L  A  +      G   +     + V
Sbjct: 458 SQILVTMPIFIAVWRALQGIPSFK----VTYFLGLELAATSYQKLFEGYWIYLPIIIVTV 513

Query: 491 GIWPIIMSLSMFIQMKMSPPPAD-------KGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
            +  +   +   +  K S    +       K Q      + ++F+F    F A L IYW 
Sbjct: 514 LVQALQQIIPKILNKKKSNRIMNVQENETLKKQQKTQRIVSIIFIFFGVIFQASLQIYWI 573

Query: 544 WSNVISIVQQ---AVIMKMHGAEIGLI 567
              +  I+Q      + K +     + 
Sbjct: 574 IGGIWEILQTLGIFYLQKSNFYREKMR 600


>gi|320580881|gb|EFW95103.1| Mitochondrial integral inner membrane protein, putative [Pichia
           angusta DL-1]
          Length = 318

 Score = 56.5 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 61/188 (32%), Gaps = 30/188 (15%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           +   K   Q+++ +            LQIP++  + +   +     +         L+  
Sbjct: 132 KERMKRQRQIFRDNGCQSWKFLALPALQIPLWITLSQTFRVLTGWTNVRATVLDPTLSTE 191

Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS--------------MFIQMK-----MSP 509
               +  L    P++        I P+++ ++              M +  +     + P
Sbjct: 192 GLGYLTNLTLSDPYF--------ILPVVLGVTALTNAEWNFRTADLMKLTTRGVRNSLRP 243

Query: 510 PPADKGQAMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568
              D    + L  M +   V   +  PA L IYW  SN+ S+ Q  ++ K          
Sbjct: 244 TAFDSV--INLTRMSICFLVVLSAQAPAALSIYWISSNIYSLAQNILLNKFMPLRYTPYA 301

Query: 569 RLRSTFSK 576
           R   +  K
Sbjct: 302 RSAPSTKK 309


>gi|302652675|ref|XP_003018183.1| mitochondrial export translocase Oxa2, putative [Trichophyton
           verrucosum HKI 0517]
 gi|291181797|gb|EFE37538.1| mitochondrial export translocase Oxa2, putative [Trichophyton
           verrucosum HKI 0517]
          Length = 336

 Score = 56.5 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 90/279 (32%), Gaps = 74/279 (26%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL-LFFPLAKKQYVSTANMKNIQP 394
            G  + ++ P+  +       +     +I+      KL        +     A  + I  
Sbjct: 58  SGLPWVLSIPITAITVRCCVALPLQVWSILKARQLQKLNPLLLTWSRVCQKKAMDEAIME 117

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
                 +  + S  Q  +    +LYK   I P AG   IL Q+PV+ A+ + +   + M 
Sbjct: 118 GRHLFPKAIEVSWQQDFKLKRKELYKRWKIRPWAGYASIL-QLPVWLAMMECLRRMVGMS 176

Query: 455 H----------------APFW-----------GWIKDLAAADPTNIFTLFGILPFYLPGF 487
                            AP              W  DL  ADP                 
Sbjct: 177 GGLLSIIQSWIESKVDGAPIIEVEPSMAMEGALWFPDLLVADP----------------- 219

Query: 488 MHVGIWPIIMSLSMFIQ-------------MKMSPPPADKGQA-MILNWM---------P 524
             + + P++++ SMF                K+    A + +A  IL            P
Sbjct: 220 --IHVLPVVLAASMFTNVTWGWKVKSAAEISKLPRSEAIRERAFKILKRFLQGLSIWLAP 277

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           V+     S  PAGL+IYW  S+  +  Q  ++ ++   +
Sbjct: 278 VM---IYSQAPAGLLIYWISSSTFATAQTQIVRRVMRTK 313


>gi|332709872|ref|ZP_08429828.1| YidC/Oxa1 family membrane protein insertase [Lyngbya majuscula 3L]
 gi|332351243|gb|EGJ30827.1| YidC/Oxa1 family membrane protein insertase [Lyngbya majuscula 3L]
          Length = 389

 Score = 56.5 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 2/119 (1%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY +V ++G+AI+  T+ ++   FPL      +   MK  Q
Sbjct: 1   MDFGIGFISNNIMLPILDFFYGIVPSYGLAIIALTLVIRFALFPLNAGSIRNMRRMKVTQ 60

Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + + +E  K +       Q+  +        NPLAGC P+L+Q+PV FA++  +  S
Sbjct: 61  PLMKKEQEAIKERYKDDPAKQQEEMSKLFQKFGNPLAGCLPLLVQMPVLFALFATLRGS 119



 Score = 51.1 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 8/108 (7%)

Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-----KGQAMILNWMPVVFVFALS 532
           G           +    +   +S+++   +S   A        Q  +    PV+F     
Sbjct: 257 GAFDDDGTIHWDIVGMILFFGISLYVNQLLSGSGAGSGQAGDQQKAVNQITPVLFSGMFL 316

Query: 533 SFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
            FP  AG+++Y   +N+   +Q   I+        L + +     +  
Sbjct: 317 FFPLPAGVLMYIVVANIFQTIQT-FILSREPLPENLQEIVEQQEKEAK 363


>gi|312601631|gb|ADQ90886.1| Putative uncharacterized protein [Mycoplasma hyopneumoniae 168]
          Length = 609

 Score = 56.5 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 103/327 (31%), Gaps = 29/327 (8%)

Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325
                   + + +  G+A    K               T ++          I    K  
Sbjct: 278 KSGKDVSPEAEKILSGYANLVKKLVFPANFSRIDIQNKTYSWNNNDESAAKNIAFQNKIP 337

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV----------GNFGIAIMLTTVFVKLLF 375
           A P       W    F A  ++ L      +               ++I+   VF K++ 
Sbjct: 338 AFPIVSWAESWKLGPFYAIFVYPLSKIILWVTASQSLYEWSGWITILSILAVVVFTKIIS 397

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSP-----PQVLQKAMIQLYKTHNINPLAGC 430
           F    K          +Q K  ++  K++         Q  ++ ++ LYK +N +P +  
Sbjct: 398 FIFRFKTIFGQNKQMELQLKKAKIDAKYENYKKNKVMQQRHRQEIVDLYKKNNFSPFSPF 457

Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
             IL+ +P+F A+++ +      +      +   L  A  +      G   +     + V
Sbjct: 458 SQILVTMPIFIAVWRALQGIPSFK----VTYFLGLELAATSYQKLFEGYWIYLPIIIVTV 513

Query: 491 GIWPIIMSLSMFIQMKMSPPPAD-------KGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
            +  +   +   +  K S    +       K Q      + ++F+F    F A L IYW 
Sbjct: 514 LVQALQQIIPKILNKKKSNRIMNVQENETLKKQQKTQRIVSIIFIFFGVIFQASLQIYWI 573

Query: 544 WSNVISIVQQ---AVIMKMHGAEIGLI 567
              +  I+Q      + K +     + 
Sbjct: 574 IGGIWEILQTLGIFYLQKSNFYREKMR 600


>gi|225619323|ref|YP_002720549.1| inner membrane protein [Brachyspira hyodysenteriae WA1]
 gi|225214142|gb|ACN82876.1| inner membrane protein [Brachyspira hyodysenteriae WA1]
          Length = 926

 Score = 56.5 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 22/214 (10%)

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
               +  +    +   +  +  ++  +    L+    K Q         ++P I+ ++  
Sbjct: 20  TIFYYFKVETQSSYTVSVILVSLIINILSLPLYNIAEKWQQKERDMQVKMKPMINNIKAV 79

Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462
           +K     +L +   ++     I    G   +L+QIP F A Y   +         F+  I
Sbjct: 80  YKGDQAYLLIRTCQRINGYKTIYAFRGVLGLLIQIPFFLAGYNFFTSLTGAETESFFL-I 138

Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL-----SMFIQMKMSPPPADKGQA 517
           K L  AD       +           ++ + P IM+      +     K++   +     
Sbjct: 139 KSLGEADKIIHIGNY-----------YINLLPFIMTAFSLASTFIYSKKLTFKESIPI-- 185

Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
                M + F+  L S PA L++YW+ +   S  
Sbjct: 186 ---FLMSLFFLVFLYSSPAILLLYWTINCAFSFF 216


>gi|226287180|gb|EEH42693.1| inner membrane protein OXA1 [Paracoccidioides brasiliensis Pb18]
          Length = 514

 Score = 56.5 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 80/242 (33%), Gaps = 39/242 (16%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVS----- 385
             I   + +  +  +  ++   +   G   +   + T V +++     A     +     
Sbjct: 148 KAIGLDYGWGPSLLIETILESLHIHGGLPWVGATITTAVLLRVAMLKFAIDASDTSAKVA 207

Query: 386 --TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
                 + IQ ++     +      Q    A   + + +NI  +      ++QIP+ F  
Sbjct: 208 SVKHLTQPIQQEVKRCYRENDTIGMQRALSARRIINENYNIKLMK-LAYPMIQIPLNFGA 266

Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           ++V+     +      +  + W+  +   DP                     I P+   L
Sbjct: 267 FRVLRGMSALPVPGLDSESFLWLSSVTVHDPLF-------------------ILPVSTGL 307

Query: 500 SMFIQMKM-----SPPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            M    K+     S        A   +L  +PV+        P  L I+++ ++V++I+Q
Sbjct: 308 LMHYTFKLGGEVSSSTDQTAMAAKPLLLYGLPVLSTVCTLFLPGILQIFFASTSVLAILQ 367

Query: 553 QA 554
             
Sbjct: 368 SY 369


>gi|149636666|ref|XP_001511643.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 248

 Score = 56.5 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 68/189 (35%), Gaps = 26/189 (13%)

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA-MIQLYKTHNINPLAGCWPILLQIPV 439
                  +  +++ K     ++  +       +  + +LY  HN +P      + +Q+P+
Sbjct: 18  NIAKYLNHEISLRAKRLGWSKRIARLTHMNNMRRLVSELYVRHNCHPFKATLLVWIQLPM 77

Query: 440 FFAIYKVISI----SLEMRHAPF--------WGWIKDLAAADPTNIFTLFGILPFYLPGF 487
           +  +   +      +++    P           W  DL   D T I              
Sbjct: 78  WVVVSVALRNLSVGAVDSEGLPIREQLSTGGALWFPDLTVLDSTLILP------------ 125

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
           + +GI  ++  + +F   K+      K     +  + V+ +   ++ P+ + +YW  S+ 
Sbjct: 126 VSLGILNLL-IVEVFALQKLEMSRFQKYLTHFIRGVSVLMIPIAATVPSSIALYWLCSSC 184

Query: 548 ISIVQQAVI 556
           + + Q  ++
Sbjct: 185 LGLSQNLLL 193


>gi|326480453|gb|EGE04463.1| inner membrane protein COX18 [Trichophyton equinum CBS 127.97]
          Length = 315

 Score = 56.5 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 86/285 (30%), Gaps = 73/285 (25%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388
            F                  ++  F+++ G   +  +  T            +     A 
Sbjct: 30  NFHASNPNRIIDSSVLVAHDVIQGFHSITGLPWVLSIPLTAITLNPLLLTWSRVCQKKAM 89

Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448
            +  +       +  + S  Q  +    +LYK   I P A    IL Q+PV+ A+ + + 
Sbjct: 90  DEAFREGRHLFPKAIEASWQQDFKMKRKELYKRWKIRPWASYASIL-QLPVWLAMMESLR 148

Query: 449 ISLEMRH----------------APFW-----------GWIKDLAAADPTNIFTLFGILP 481
             + M                  AP              W  DL  ADPT+         
Sbjct: 149 RMVGMSGGLLSIIQSWIESKVDGAPIIEVEPSMATEGALWFTDLLIADPTH--------- 199

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMK-----MSPPPADKGQ-------------AMILNWM 523
                       P++++ +MF  +       S     K Q               +L  +
Sbjct: 200 ----------ALPVVLAATMFTNVTWGWKVKSAAEISKLQRSEAIRERAFKTLKRVLQGL 249

Query: 524 -----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                PV+     S  PAGL++YW  S+  +  Q  ++ ++   +
Sbjct: 250 SIWLAPVM---IYSQAPAGLLVYWISSSTFATAQTQIVRRVMRTK 291


>gi|158294492|ref|XP_001688695.1| AGAP005624-PA [Anopheles gambiae str. PEST]
 gi|157015588|gb|EDO63701.1| AGAP005624-PA [Anopheles gambiae str. PEST]
          Length = 351

 Score = 56.5 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 81/272 (29%), Gaps = 35/272 (12%)

Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360
             T   F    ++  P  +  +  + +     L  W         +  L++    +  N 
Sbjct: 46  EATVAGFWQTLSQSAPVAYVQQGMINLHDLTGLPWWATVILTTVGLRTLVTLPLAVYQNK 105

Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-LY 419
            +A +               +             K     EK  +       K     L 
Sbjct: 106 ILARLEQISLEMP-------ELIKELKAETAYAMKKFNWTEKEARIMYNHSLKKQWNNLI 158

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF---------------WGWIKD 464
              N +P      +  QIP++      I   + M   P                +GWI +
Sbjct: 159 VRENCHPAKTMVLLWGQIPLWIVQSVAIRNLVSMLPDPTAIEAQIAYTELTLGGFGWIPN 218

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524
           L   D + IF +         G +++ I  I  +    +  K+     +     +   + 
Sbjct: 219 LTELDHSLIFPV-------ALGVINLSIIEIQAASRTKLPSKLQTIFTN-----LFRGLS 266

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           ++ V   +S P+ L +YW  S+   + Q  ++
Sbjct: 267 ILMVPIAASVPSCLCLYWVTSSAYGLGQNLLL 298


>gi|237750773|ref|ZP_04581253.1| predicted protein [Helicobacter bilis ATCC 43879]
 gi|229373218|gb|EEO23609.1| predicted protein [Helicobacter bilis ATCC 43879]
          Length = 197

 Score = 56.5 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 74/175 (42%), Gaps = 17/175 (9%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           ++ + + + + + +   +   +    N+G++I+L ++ ++L    L         +   +
Sbjct: 4   ILYYIFIFPVEQVLEWALFTLFKATKNYGVSIILLSLIMQLFMLKLTFYFDKKATSFGAL 63

Query: 393 QPK-IDELREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIYKVIS 448
           + +   +++E  +      LQ  +  LYK  + +P   L G   + LQIP F A+   + 
Sbjct: 64  KAQCDSKIKEFKRVFKGAELQSYIRTLYKQRHFHPIFALFGLGGLALQIPFFIAMIH-LV 122

Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
            + E   +  + WI DL+  D   +F L             + I P++M+    I
Sbjct: 123 ENAEYLQSVRFLWIDDLSKPDSIMLFGL------------SIHILPLLMTAFTLI 165


>gi|330798642|ref|XP_003287360.1| hypothetical protein DICPUDRAFT_18752 [Dictyostelium purpureum]
 gi|325082627|gb|EGC36103.1| hypothetical protein DICPUDRAFT_18752 [Dictyostelium purpureum]
          Length = 378

 Score = 56.5 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 90/281 (32%), Gaps = 34/281 (12%)

Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348
                       +               TI        I   E++   G   FI     +
Sbjct: 76  IVDPNKINSAASNNNILEPTKLPTDNIDTITINLDKFKINDPELIPITGIPTFI----EV 131

Query: 349 LMSYFYNLVGNFGIAIM-LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407
            ++  +       + I+   TV ++L  FP++ K  V++A +  I+P++D+ +E+ K   
Sbjct: 132 CLNKLHQFSHLPWLIIVPTFTVALRLALFPISIKSRVNSARLLEIKPQLDKFKEQQKLLR 191

Query: 408 PQ--------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA--- 456
            +         +   +  + +    +P+      L  +P   +         E   +   
Sbjct: 192 QKGAPLSERAEVSDKITTILREKGCHPIYSFLLPLSNLPFLVSSVFAFRDMAENYPSLKD 251

Query: 457 PFWGWIKDLAAADPTNIF-TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
               W  DLA++DP  I  T+   L               +++L  ++            
Sbjct: 252 AGMLWFPDLASSDPLFILPTICSALYLLATELAFANSQSFLINLVKWVS----------- 300

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ-QAV 555
                  M V  +    S PA   +YW  S + +I Q Q  
Sbjct: 301 -----RIMSVSLILFSPSIPAICYLYWVPSAIFTIAQIQLF 336


>gi|156097693|ref|XP_001614879.1| inner membrane protein oxa1-2 [Plasmodium vivax SaI-1]
 gi|148803753|gb|EDL45152.1| inner membrane protein oxa1-2, putative [Plasmodium vivax]
          Length = 453

 Score = 56.5 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 82/243 (33%), Gaps = 26/243 (10%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
           ++   +++     +L         ++  +I+ TT F++++  PL           K + P
Sbjct: 164 NYESSWYVELVYELLNCTKIMFDCSWMTSIVATTSFMRMIILPLTVSAERDRRKQKILNP 223

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTH---------NINPLAGCWPILLQIPVFFAIYK 445
            I EL  K K +      K  ++  K           ++ P +       Q P+FF  Y 
Sbjct: 224 LIKELTNKLKSNAQDGNIKMALEFKKKILNIRNTHGISLIPKSIIMMAFFQTPLFFIFYF 283

Query: 446 VI---SISLEMRHAPFW---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
            +   +   E+     +    W+  L+  DP  I  L   L       +      +I   
Sbjct: 284 SMKKMASYPEVFKEFTFESPLWLDSLSLPDPYYILPLLSSLLLLSNNELTA----LIDKA 339

Query: 500 SMFIQMKMSPPPADKGQAMI-------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
               +         + Q  +       +    +  +F   S P+GL+IY   + V  ++ 
Sbjct: 340 LSNSKSSSLSGDDSEFQKKMKQVTKLAMRLFYISSLFFFKSMPSGLLIYLITNTVFQLLT 399

Query: 553 QAV 555
             +
Sbjct: 400 TQI 402


>gi|323348851|gb|EGA83089.1| Oxa1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 260

 Score = 56.2 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 63/192 (32%), Gaps = 18/192 (9%)

Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA-- 428
           +  L+   +     ++     +    ++L         Q++     +L  +H I      
Sbjct: 1   MFPLYVKSSDTVARNSHIKPELDALNNKLMSTTDLQQGQLVAMQRKKLLSSHGIKNRWLA 60

Query: 429 -GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487
                I + +  F A+  + +  ++        W  DL  ADP     +     F     
Sbjct: 61  APMLQIPIALGFFNALRHMANYPVDGFANQGVAWFTDLTQADPYLGLQVITAAVFISFTR 120

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
           +               Q   SP         +   +P++ + A  +  + +++Y++++  
Sbjct: 121 L---------GGETGAQQFSSP------MKRLFTILPIISIPATMNLSSAVVLYFAFNGA 165

Query: 548 ISIVQQAVIMKM 559
            S++Q  ++   
Sbjct: 166 FSVLQTMILRNK 177


>gi|6707005|gb|AAF25545.1|AF109218_5 lipoprotein precursor [Staphylococcus carnosus]
          Length = 225

 Score = 56.2 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 80/195 (41%), Gaps = 35/195 (17%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ---- 393
           +  F+     ++     +   ++G+AI++  + ++++  P     Y ++  M+       
Sbjct: 33  YNTFVKNMDNIIHWLGASFNNDYGLAIIVLVLAIRIIVLPFMLSNYKNSHMMREKMIIAK 92

Query: 394 PKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKV 446
           P +D ++EK +++  Q       + M+++YK +++NP+    GC P+L+Q+P+   ++ V
Sbjct: 93  PDMDAVKEKVQRARTQEDKMAANQEMMEVYKKYDMNPMQSMLGCLPMLIQMPIIMGLFFV 152

Query: 447 I--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
           +       +     + W  +LA  D                         +I  +  F+Q
Sbjct: 153 LKYPSPGGITEHSHFLWF-NLAKPDIW---------------------ITVIAGVLYFLQ 190

Query: 505 MKMSPPPADKGQAMI 519
             +S       Q  +
Sbjct: 191 AYVSTFSMPPEQKQM 205


>gi|238783046|ref|ZP_04627073.1| Inner membrane protein oxaA [Yersinia bercovieri ATCC 43970]
 gi|238716047|gb|EEQ08032.1| Inner membrane protein oxaA [Yersinia bercovieri ATCC 43970]
          Length = 96

 Score = 56.2 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 30/95 (31%), Gaps = 12/95 (12%)

Query: 16  IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75
           +I  AWQ         +   +  N  T  + +Q               A      + +K 
Sbjct: 1   MIWQAWQVDNNPQPAAQTTQQTANTATGDKASQAVP------------ASGQGQLITVKT 48

Query: 76  PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
             L  +IN +G   +  NL  Y   + S+     L
Sbjct: 49  DVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL 83


>gi|321461780|gb|EFX72808.1| hypothetical protein DAPPUDRAFT_325857 [Daphnia pulex]
 gi|321461781|gb|EFX72809.1| hypothetical protein DAPPUDRAFT_325858 [Daphnia pulex]
          Length = 332

 Score = 56.2 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 79/243 (32%), Gaps = 36/243 (14%)

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVF-----VKLLFFPLAKKQYVSTANMKNIQPKID 397
                 L+   ++       A ++ +       + L         Y    N+K     I 
Sbjct: 61  VVNTQHLLETVHDYTHLPWWATIVVSTISLRLAITLPLAAYQHIIYARLGNLKPEMDAIL 120

Query: 398 ELREKFKQSPPQVLQKAMIQ---------------LYKTHNINPLAGCWPILLQIPVFFA 442
           +  +K       + +    +               L +  N +       +  QIP++  
Sbjct: 121 KDLKKETDRAVIMYKWDAKKAKLAFHVSAKKQWNLLIQRDNCHQFKATVLLWGQIPLWVC 180

Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL--FGILPFYLPGFMHVGIWPIIMSLS 500
           +      S+ +R+      ++ + A       +   FG +P  L    H  I P+ M+L+
Sbjct: 181 M------SVALRNMAMMLPVQTIDAQILYLSLSTGGFGWIP-NLTEVDHSLILPVFMALT 233

Query: 501 MF------IQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
                   +  K+ P          +L    +V V   +  PA + +YW+ S+V  + Q 
Sbjct: 234 NLAIIQIQVMSKVGPSSRLSNAMMNVLRVFCLVMVPVAAYAPADVALYWTVSSVYGLAQN 293

Query: 554 AVI 556
            V+
Sbjct: 294 LVL 296


>gi|302503230|ref|XP_003013575.1| mitochondrial export translocase Oxa2, putative [Arthroderma
           benhamiae CBS 112371]
 gi|291177140|gb|EFE32935.1| mitochondrial export translocase Oxa2, putative [Arthroderma
           benhamiae CBS 112371]
          Length = 336

 Score = 56.2 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 90/279 (32%), Gaps = 74/279 (26%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL-LFFPLAKKQYVSTANMKNIQP 394
            G  + ++ P+  +       +     +I+      KL        +     A  + I  
Sbjct: 58  SGLPWVLSIPITAITVRCCVALPLQVWSILKAQQLQKLNPLLLTWSRVCQKKAMDEAIME 117

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
                 +  + S  Q  +    +LYK   I P AG   IL Q+PV+ A+ + +   + M 
Sbjct: 118 GRHLFPKAIEVSWQQDFKIKRKELYKRWKIRPWAGYASIL-QLPVWLAMMESLRRMVGMS 176

Query: 455 H----------------APFW-----------GWIKDLAAADPTNIFTLFGILPFYLPGF 487
                            AP              W  DL  ADP                 
Sbjct: 177 GGLLSIIQSWIESKVDGAPIIEIEPSMAMEGALWFPDLLVADP----------------- 219

Query: 488 MHVGIWPIIMSLSMFIQMK-----MSPPPADKGQA---------MILN--------WM-P 524
             + + P++++ SMF  +       S     K Q           IL         W+ P
Sbjct: 220 --IHVLPVVLAASMFTNVTWGWKVKSAAEISKLQRSEAIRERSFKILKRVLQGLSIWLAP 277

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           V+     S  PAGL+IYW  S+  +  Q  ++ ++   +
Sbjct: 278 VM---IYSQAPAGLLIYWISSSTFATAQTQIVRRVMRTK 313


>gi|308808203|ref|XP_003081412.1| Inner membrane protein translocase involved in respiratory chain
           assembly (ISS) [Ostreococcus tauri]
 gi|116059874|emb|CAL55581.1| Inner membrane protein translocase involved in respiratory chain
           assembly (ISS) [Ostreococcus tauri]
          Length = 430

 Score = 55.8 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 70/207 (33%), Gaps = 21/207 (10%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           +   + ++ +  +L+  P+A +   ++A +          ++   +          ++  
Sbjct: 12  WCATLAVSALCARLVTAPVAARTTKASATVSAASALAKATKQGDAERVSIKDVLEAMKEL 71

Query: 420 KTHN---INPLAGCWPILLQIPVF-FAIYKVISISLEMRH----APFWGWIKDLAAADPT 471
           +  +    +P       L QIP+F  A+  V  ++ E       +    W  DL      
Sbjct: 72  RERSGVGAHPAWLVAGPLAQIPLFACAMMAVRRLASEGGSNGLISGGVFWFSDLTLPAMD 131

Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI------LNWMPV 525
                  + P+         + PI+ + ++F  +  +   A +    +      L WM +
Sbjct: 132 IATMSAPMGPYGA-------VLPIVTAGALFANVNANFAAAAQQSRGMTIVKLCLEWMTL 184

Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQ 552
             +      P  +  YW  S+  +  Q
Sbjct: 185 PMLLIGLQLPQAVHCYWITSSAYAYAQ 211


>gi|329937988|ref|ZP_08287470.1| membrane protein [Streptomyces griseoaurantiacus M045]
 gi|329302945|gb|EGG46834.1| membrane protein [Streptomyces griseoaurantiacus M045]
          Length = 248

 Score = 55.8 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 19/220 (8%)

Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422
           AI+L T  V+LL  PL++           ++P+I ELRE+ +  P + LQ+A+++L+   
Sbjct: 27  AIVLFTALVRLLVHPLSRAAARGQKAGAALRPRIAELRERHRDDPRK-LQEAVLELHARE 85

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI-LP 481
            ++PL GC P LLQ P F  +Y + S S            + LAA          G   P
Sbjct: 86  RVSPLGGCLPSLLQAPAFLLLYHLFSSSSLGDDPNGLLHHRLLAAPLGGRWADALGHGGP 145

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKM---------------SPPPADKGQA--MILNWMP 524
           F   G +++ ++ ++  ++ F   +                + P A    A   +  ++ 
Sbjct: 146 FGAQGLVYLALFALVGVVATFTYRRTRRGMAAAAPAVAGHGTGPAAGALGAVTRVTPFLS 205

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            + +  ++  P    +Y   S   + V++AV+ +    E 
Sbjct: 206 FITLVTVALVPLAAALYVVTSAAWTAVERAVLDREASVEP 245


>gi|159027290|emb|CAO89385.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 382

 Score = 55.8 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +F+ +V ++G AI+  T+ V+   FPL+  Q  +   M+  Q
Sbjct: 1   MDFGVGFISTNIMLPILDFFFRIVHSYGFAIIALTLVVRFAVFPLSAGQIRNMRKMRITQ 60

Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + E +   + +       Q+  +        NPLAGC P+LLQ+P+  A++  +  S
Sbjct: 61  PLMKERQAEIQQRYKNDPQKQQEEMGKLMQELGNPLAGCLPLLLQMPILLALFATLRGS 119



 Score = 55.4 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 43/99 (43%), Gaps = 12/99 (12%)

Query: 490 VGIWPIIMSLSMFIQMKMSPPPAD-----KGQAMILNWMPVVFVFALSSFP--AGLIIYW 542
           +    I   +S+++  ++S   A      + Q  +    P++F      FP  AG+++Y 
Sbjct: 269 ILAMVIAFGISIYVNQELSGAGAPSGGAAQQQQTVNKITPIIFSMMFLFFPLPAGVLMYI 328

Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +N+   +Q  ++M+       L + L+   ++   ++
Sbjct: 329 LTANIFQTIQTVILMR-----EPLPENLQKLVAEQEKTE 362


>gi|111119058|gb|ABH05957.1| mitochondrial Oxa1p [Paracoccidioides brasiliensis]
          Length = 474

 Score = 55.8 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 81/242 (33%), Gaps = 39/242 (16%)

Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVS----- 385
             I   + +  ++ +  ++   +   G   +   + T V +++     A     +     
Sbjct: 148 KAIGLDYGWGPSRLIETILESLHIHGGLPWVGATITTAVLLRVAMLKFAIDASDTSAKVA 207

Query: 386 --TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
                 + IQ ++     +      Q    A   + + +NI  +      ++QIP+ F  
Sbjct: 208 SVKHLTQPIQQEVKRCYRENDTIGMQRALSARRIINENYNIKLMK-LAYPMIQIPLNFGA 266

Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
           ++V+     +      +  + W+  +   DP                     I P+   L
Sbjct: 267 FRVLRGMSALPVPGLDSESFLWLSSVTVHDPLF-------------------ILPVSTGL 307

Query: 500 SMFIQMKMS---PPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            M    K+        D+        +L  +PV+        P  L I+++ ++V++I+Q
Sbjct: 308 LMHYTFKLGGEVSASTDQTAMAAKPLLLYGLPVLSTVCTLFLPGILQIFFASTSVLAILQ 367

Query: 553 QA 554
             
Sbjct: 368 SY 369


>gi|296118600|ref|ZP_06837178.1| membrane protein OxaA [Corynebacterium ammoniagenes DSM 20306]
 gi|295968499|gb|EFG81746.1| membrane protein OxaA [Corynebacterium ammoniagenes DSM 20306]
          Length = 305

 Score = 55.4 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
           + +AI+L T  +K +          S   M+ +QP + E+R K+     +   + M ++Y
Sbjct: 10  WILAIVLLTWTLKAIMVKPTLSSLRSQRKMQELQPLLQEVRTKYANDKTK-QAEEMQKVY 68

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           K   + P+AGC P++ QIP+F  ++ V+  
Sbjct: 69  KDAKVRPMAGCLPMVAQIPMFIGLFHVLRS 98



 Score = 52.7 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           L  MP + V +   +P GL+ Y   + V + VQ  ++      E    ++ +    +   
Sbjct: 225 LWVMPGMLVISGFIWPIGLLFYMLANTVWTFVQTRMVNAKMDREEEEAEQAKIELKRTTA 284

Query: 580 SQ 581
            +
Sbjct: 285 PK 286


>gi|194209082|ref|XP_001488534.2| PREDICTED: similar to mitochondrial COX18 [Equus caballus]
          Length = 336

 Score = 55.4 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 64/163 (39%), Gaps = 31/163 (19%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----------SLEMRHAP 457
           + +++ + +LY   N +P      + +Q+P++  +   +             S++ + A 
Sbjct: 153 KNMRRLVSELYVRDNCHPFKATVLVWIQLPMWIFMSIALRNFSTGAARSEGFSVQEQLAS 212

Query: 458 F-WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
               W +DL A D T I                + +  +     +F   K+        Q
Sbjct: 213 GGVLWFRDLTALDSTWIL---------PVSVGVINLLIV----EIFALQKIGMSR---FQ 256

Query: 517 AMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             I +++    V+ +   ++ P+ +++YW  S+ + + Q  ++
Sbjct: 257 TYITHFVRAVSVLIIPVAATLPSSIVLYWLCSSFMGLSQNLLL 299


>gi|169616061|ref|XP_001801446.1| hypothetical protein SNOG_11202 [Phaeosphaeria nodorum SN15]
 gi|160703104|gb|EAT81701.2| hypothetical protein SNOG_11202 [Phaeosphaeria nodorum SN15]
          Length = 434

 Score = 55.4 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 75/236 (31%), Gaps = 31/236 (13%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +         + S + N    +  +IML  V V+   F          A +  ++P  + 
Sbjct: 50  WGLTTVFERTIESIYLNTGYGWAGSIMLAAVAVRGATFFFQALSSDRMAALAALKPLTEP 109

Query: 399 LREKFKQSPPQVLQK-AMIQLYKTHNIN--PLAGCWPI----LLQIPVFFAIYKVISISL 451
           ++EK   +  +  ++   +   +   +    + G + +    ++Q  + F+ ++ +    
Sbjct: 110 IQEKLTAAIARGDKQAEQMYKMQQAQVMAPHMGGMFSMGGFMIIQAWIGFSAFRCLRAMG 169

Query: 452 EM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQM 505
            +         + W KDL   DP  +        FY    M    G+           Q 
Sbjct: 170 ALPVPGMANDGFFWFKDLTVNDPYYLIPAAITGIFYSLFKMGGETGVSAEAAG-----QQ 224

Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV------QQAV 555
                  +  +  ++  +        S  PA L +Y+  S V+         Q   
Sbjct: 225 -------NAFRQSLMTGLAFFMGIVTSFQPAVLQLYFLTSGVLGAGTGYLLRQNWF 273


>gi|166363143|ref|YP_001655416.1| putative inner membrane protein translocase component YidC
           [Microcystis aeruginosa NIES-843]
 gi|166085516|dbj|BAG00224.1| inner membrane protein [Microcystis aeruginosa NIES-843]
          Length = 382

 Score = 55.0 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +F+ +V ++G AI+  T+ V+   FPL+  Q  +   M+  Q
Sbjct: 1   MDFGVGFISTNIMLPILDFFFRIVHSYGFAIIALTLVVRFAVFPLSAGQIRNMRKMRITQ 60

Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           P + E +   + +       Q+  +        NPLAGC P+LLQ+P+  A++  +  S
Sbjct: 61  PLMKERQTEIQQRYKNDPQKQQEEMGKLMQELGNPLAGCLPLLLQMPILLALFATLRGS 119



 Score = 55.0 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 43/99 (43%), Gaps = 12/99 (12%)

Query: 490 VGIWPIIMSLSMFIQMKMSPPPAD-----KGQAMILNWMPVVFVFALSSFP--AGLIIYW 542
           +    I   +S+++  ++S   A      + Q  +    P++F      FP  AG+++Y 
Sbjct: 269 ILAMVIAFGISIYVNQELSGAGAPSGGAAQQQQTVNKITPIIFSMMFLFFPLPAGVLMYI 328

Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581
             +N+   +Q  ++M+       L + L+   ++   ++
Sbjct: 329 LTANIFQTIQTVILMR-----EPLPENLQKLVAEQEKTE 362


>gi|213621389|ref|ZP_03374172.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
          Length = 45

 Score = 55.0 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 493 WPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536
            PI+M ++MF   KMSP    D  Q  I+ +MPV+F      FP+
Sbjct: 1   MPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPS 45


>gi|26554487|ref|NP_758421.1| putative inner membrane protein translocase component YidC
           [Mycoplasma penetrans HF-2]
 gi|38503022|sp|Q8EU91|OXAA_MYCPE RecName: Full=Membrane protein oxaA
 gi|26454497|dbj|BAC44825.1| conserved hypothetical protein [Mycoplasma penetrans HF-2]
          Length = 379

 Score = 55.0 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 58/321 (18%), Positives = 114/321 (35%), Gaps = 26/321 (8%)

Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334
           F+ + D   +      +      P  S     +                   I  +    
Sbjct: 58  FQTMVDPTVKTSTTIGSGMEFGFPFGSTGDFRYDLTSGANNEYYAFTSTQWNISDYGPFF 117

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
              + Y  A  +  +M    ++ G  +  + I +    ++L+ F ++ +  + +  M  I
Sbjct: 118 GL-FVYPGAMLVLSIMYPLRDVWGGLDALLGIFVLLFIIRLITFLISIRSTMQSERMSEI 176

Query: 393 QPKIDELREKFKQSP-----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV- 446
           Q K+ E+  K+K         Q  Q    +LYK +NI P A    + + +P+F  +Y+V 
Sbjct: 177 QGKLAEINAKYKDVKKDMAMRQKKQLETQELYKKYNIKPFAMFEQMFVTMPIFLIVYRVV 236

Query: 447 ----------ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
                     +     +  +P      +L+      IF L  I+P  +       I    
Sbjct: 237 TILRPIKVINLFNIWALSASPLSEITSNLSNGGWVFIFFLLIIVPSQIISQKIPQILAKR 296

Query: 497 MSL-SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ-- 553
            +  +  +  K +     K   +    + VV VF +   PA + +YW  S++ +I Q   
Sbjct: 297 RNANARALSQKGNDSA--KKMRISQTVVMVVLVFVVVQSPASVGLYWFLSSLFTIAQSVI 354

Query: 554 --AVIMKMHGAEIGLIDRLRS 572
               I+K     + L ++LR 
Sbjct: 355 IHHYIVKRKTKGVSLEEKLRE 375


>gi|291401638|ref|XP_002717160.1| PREDICTED: mitochondrial COX18 [Oryctolagus cuniculus]
          Length = 333

 Score = 55.0 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 63/190 (33%), Gaps = 31/190 (16%)

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
                  +     +    +   + +  + +++ + +LY   N +P      + +Q+P++ 
Sbjct: 123 ASRLNQEVALRANQFGWSKRVARLTYLRNMKRLVSELYVRDNCHPFKATVLVWVQLPMWI 182

Query: 442 AIYKVISISL------------EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489
            +   +                E        W  DL A D T I                
Sbjct: 183 FMSVALRNFSTGTAHSEGLSVQEQFTTGGVLWFPDLTALDSTWIL---------PVSVGV 233

Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYWSWSN 546
           + +  +     +F   K       + Q  I ++   + V+ +   ++ P+ L +YW  S+
Sbjct: 234 INLLIV----EIFALQK---AGMSRFQIYITHFVRTLSVLMIPIAATVPSSLALYWLCSS 286

Query: 547 VISIVQQAVI 556
            + + Q  ++
Sbjct: 287 FMGLSQNLLL 296


>gi|302840911|ref|XP_002952001.1| hypothetical protein VOLCADRAFT_105325 [Volvox carteri f.
           nagariensis]
 gi|300262587|gb|EFJ46792.1| hypothetical protein VOLCADRAFT_105325 [Volvox carteri f.
           nagariensis]
          Length = 376

 Score = 55.0 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 76/243 (31%), Gaps = 41/243 (16%)

Query: 340 YFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
           +F A      +   + ++       IML  + ++L  FPL       +A M      +  
Sbjct: 68  FFAASWCISGLQAVHEMLDTPWWVSIMLFNISLRLCTFPLMVLAQRGSAKMMEFNYALLH 127

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNI----------NPLAGCWP----ILLQIPVFFAIY 444
            ++  + +     +    +L+               +P+         ++    VF +I+
Sbjct: 128 AKKLQEAAMKATNRAEHDRLFNAFRTEYTAQVSKHGDPVKTALMVPGVMIFNGFVFLSIF 187

Query: 445 KV---ISISLEMR-------HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
                +  +  +R             W  DL   DP     +   L         +    
Sbjct: 188 NGISKLMAAKVLRRCAVPSLTTGGALWFSDLTQPDPFFGLPIMCTLVTLAMVEYGIN--- 244

Query: 495 IIMSLSMFIQMKMSPPPADKGQA-MILNW----MPVVFVFALSSFPAGLIIYWSWSNVIS 549
            +   +        P P+++ QA   + W    +  +F+ A +   AG  + W  +    
Sbjct: 245 -LAGDA-------GPMPSERQQATKTMKWVFRVLAFMFIPAGNYVAAGTALLWVSNTAFG 296

Query: 550 IVQ 552
           +VQ
Sbjct: 297 VVQ 299


>gi|327275387|ref|XP_003222455.1| PREDICTED: mitochondrial inner membrane protein COX18-like [Anolis
           carolinensis]
          Length = 212

 Score = 55.0 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 61/184 (33%), Gaps = 25/184 (13%)

Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
             +      +     +     +  +    + L++ +  LY   N +P+     I +QIP+
Sbjct: 1   MAKQKVNLFISVYAKQQGWSEKLARLHFKKNLKRIVSDLYVRDNCHPVKASLLIWIQIPL 60

Query: 440 FFAIYKVISISLEMR------------HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487
           +  +   +      R                  W  DL   DPT I              
Sbjct: 61  WVFVSIALRNFSVGRAYSAGLFIQEQLSTGGMLWFPDLTVPDPTWIMP------------ 108

Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
           + +G+  ++  + +F   K+      +        + +  +   ++ P+ + +YW  S+ 
Sbjct: 109 ITLGVLNLL-IVEIFALRKIESSRFQRYATNFFRGISIFMIPVAATVPSAIALYWVSSSF 167

Query: 548 ISIV 551
           + ++
Sbjct: 168 MGLL 171


>gi|147906843|ref|NP_001090111.1| COX18 cytochrome c oxidase assembly homolog [Xenopus laevis]
 gi|77748384|gb|AAI06494.1| MGC131222 protein [Xenopus laevis]
          Length = 381

 Score = 55.0 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 86/271 (31%), Gaps = 55/271 (20%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF- 376
           +           F           +     ML+S        +   I+  TV ++     
Sbjct: 87  LSAASTGNIGSGFGWYESLSDSAPVNLAESMLISLHETSGMPWWANIICATVALRTTVTL 146

Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA------------------MIQL 418
           PL+  Q    A ++N+QP+ID L ++ +        +                      L
Sbjct: 147 PLSVYQMYILAKVENLQPEIDALAKRLRYEVSVYGNQHGWTDKVARFQFRKNLRRITSGL 206

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA-------------PFWGWIKDL 465
           Y   N +P+     I +QIP++  +   +      R A                 W  DL
Sbjct: 207 YVRDNCHPVKASLLIWIQIPMWIFVSIALRNISLNRTADTTGDAVQKQLTEGGLLWFPDL 266

Query: 466 AAADPTNIF--TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523
              D T +   TL  +  F +  F    I      LS F             Q +I N++
Sbjct: 267 TVPDSTWVLPVTLGLLNLFIVEIFALRKI-----ELSRF-------------QKIITNFI 308

Query: 524 ---PVVFVFALSSFPAGLIIYWSWSNVISIV 551
               +  +   ++ P+ + +YW  S+ + + 
Sbjct: 309 RAISIAMIPIAATVPSSMALYWVTSSCVGLA 339


>gi|88607139|ref|YP_505134.1| hypothetical protein APH_0541 [Anaplasma phagocytophilum HZ]
 gi|88598202|gb|ABD43672.1| putative membrane protein [Anaplasma phagocytophilum HZ]
          Length = 122

 Score = 54.6 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/121 (38%), Positives = 77/121 (63%), Gaps = 1/121 (0%)

Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369
            GAKE   +  Y+  L IP F+  +D+G  YFI KP+F+L+ YF+ L+GNFG+AI++ TV
Sbjct: 1   MGAKELELLDQYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQYFHKLLGNFGLAIVMLTV 60

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429
            +KL+ FPL+ + YVS   +K +QP++  ++E +K      + K +  L+K H ++P+  
Sbjct: 61  AIKLVAFPLSMRSYVSMFKLKRLQPEVLRIKELYKTDDL-RISKEIASLFKKHKVSPVNE 119

Query: 430 C 430
            
Sbjct: 120 F 120


>gi|307109135|gb|EFN57373.1| hypothetical protein CHLNCDRAFT_142761 [Chlorella variabilis]
          Length = 632

 Score = 54.6 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 51/166 (30%), Gaps = 46/166 (27%)

Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-----GWIKDLAAADPTNIFTLFGI 479
           +P       L Q+PVF      I  ++ +   P +      W  DL             +
Sbjct: 240 HPAWALASPLAQLPVFITAMAAIR-TMSLSGWPGFSTGGGAWFPDLTLP-------AMDL 291

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFI------------------QM----KMSPPPADKGQA 517
             +  P  M   + P+ + LSM                    Q     +   P   + QA
Sbjct: 292 ATWTAPMGMAGVVLPVGIVLSMLANIDAAFTGKRACRMVAGWQQLDAKRRQLPAGSRQQA 351

Query: 518 MILNW-----------MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            ++ W           M V         P G + YW+  + ++++Q
Sbjct: 352 SVMLWVMGGLRLLLEWMMVPLFAIALQLPQGALCYWAAGSGLALLQ 397


>gi|319950012|ref|ZP_08023991.1| putative inner membrane protein translocase component YidC [Dietzia
           cinnamea P4]
 gi|319436323|gb|EFV91464.1| putative inner membrane protein translocase component YidC [Dietzia
           cinnamea P4]
          Length = 248

 Score = 54.6 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 24/197 (12%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
            +   ++++    +          VG+  + ++   + +    +               +
Sbjct: 9   SLVMKFWHWALSFVVDP-DSGVAWVGSVLLLVVTVRLLLLRSMWRQQYSMRKMAQLAPKM 67

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--- 449
           +   ++ +++      Q   K M  LY    +NPLAGC P+L+QIPVF  +Y V+     
Sbjct: 68  KELQNKYKDRKSPEDRQEQAKEMQALYADAGVNPLAGCLPLLVQIPVFLGLYYVLLNFSP 127

Query: 450 --------------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP- 494
                         +        +   +       + I     ++    PG +   I   
Sbjct: 128 PGKSIEEASQMTNGAFGPEQVSSFLNAEIFGVPLASYIRMPQEVMDSLHPGLVREDILML 187

Query: 495 -----IIMSLSMFIQMK 506
                ++  ++ FI M 
Sbjct: 188 AVPLFVLAGIATFINMW 204


>gi|296822736|ref|XP_002850334.1| inner membrane protein COX18 [Arthroderma otae CBS 113480]
 gi|238837888|gb|EEQ27550.1| inner membrane protein COX18 [Arthroderma otae CBS 113480]
          Length = 312

 Score = 54.6 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 87/294 (29%), Gaps = 68/294 (23%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           + H+   +++P             I   + +              +++      KL    
Sbjct: 16  LRHHHPSISLPTKRSFHASNPNRIIDSSVLIAHDIIQGFHSATVWSLLKAQQLQKLNPLL 75

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQ 436
           +   +      M     +   L     ++  Q   +    +LYK   I P    +   LQ
Sbjct: 76  ITWSRVFQKKAMDKSVIEGKHLSPIAVEAVWQRDLRIKKKELYKRWKIRP-WASYASFLQ 134

Query: 437 IPVFFAIYKVISISLEMRH----------------APFW-----------GWIKDLAAAD 469
           +PV+ A+ + +   + M                  AP              W  DL AAD
Sbjct: 135 LPVWLAMMESLRRMVGMSGGLLSIIQSWIESKVDGAPIIQIEPSMAMEGALWFPDLLAAD 194

Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPPADKGQ--------- 516
           PT+                     PII++ +MF  +    K+                  
Sbjct: 195 PTH-------------------ALPIILAATMFTNVTWGWKVKSAAEISMMRRGEAIRER 235

Query: 517 -----AMILNWMPVVFVFALSSF--PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                  IL  + +     + S   PAGL+IYW  S+  +  Q  ++ +    +
Sbjct: 236 ALKLLKRILQGLSIWLAPVMISSGAPAGLLIYWISSSTFATAQTQIVRRFMRTK 289


>gi|325973709|ref|YP_004250773.1| membrane protein OxaA [Mycoplasma suis str. Illinois]
 gi|323652311|gb|ADX98393.1| membrane protein OxaA [Mycoplasma suis str. Illinois]
          Length = 399

 Score = 54.2 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/333 (11%), Positives = 99/333 (29%), Gaps = 28/333 (8%)

Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG---AKEFPTIHHYEKDLAI 327
           F S F               A   +    ++       F        +  +         
Sbjct: 65  FQSMFTSYVFHSNEAGVGLEAAYHSGSSQRTNDLRYDAFPWTPNPWAYWPLVSSGNGFGP 124

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMS--YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
               ++  +   +      F      +      N   +I++  + +K + F    +    
Sbjct: 125 FIMWLVYPFTRVFLYLIWTFRGTQDSFMDKSGLNVVCSILIILLVMKSIVFLTIFRAQYY 184

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN---------PLAGCWPILLQ 436
           +   +  +  ++ ++ K+        +   + + +   ++         P +      + 
Sbjct: 185 SDLQQRHKKNLERIKSKYTTDKFDRKELRTMSVLRQQEVSRYCKKHGLKPFSALENFFIN 244

Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
            P+F  IYK+++I+  ++ +  +G I   +      IFT F  + +    F  + I   +
Sbjct: 245 TPIFLVIYKLMTITRPVKFSKLFG-IMPFSKTPINMIFTDFLSVGWVYILFFAIAIPVNL 303

Query: 497 MS--LSMFIQMKMSPPPADK-----------GQAMILNWMPVVFVFALSSFPAGLIIYWS 543
            S  +   +  K  P   D                + N + V  +     +   L +Y+ 
Sbjct: 304 YSQKIPSRLMKKRFPSLQDDVSLKVKDINVLSSKKLQNIISVSLIIFSLFWSTSLAVYYF 363

Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
           ++++ +I    +I  +          L      
Sbjct: 364 FNSLFNIAFSYIIHSILKKRKEKESALTKKLKN 396


>gi|322391336|ref|ZP_08064806.1| SpoIIIJ family protein [Streptococcus peroris ATCC 700780]
 gi|321145762|gb|EFX41153.1| SpoIIIJ family protein [Streptococcus peroris ATCC 700780]
          Length = 327

 Score = 54.2 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 80/221 (36%), Gaps = 34/221 (15%)

Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA--------MIQLYKTHN 423
           +LL  PL   Q             + ++ E  +    +   +         +    K H 
Sbjct: 93  RLLILPLGIYQSWKATLHSEKMNALKDVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHG 152

Query: 424 INPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL-FGIL 480
           I+ L   GC+PIL+Q+P F AIY     +  +  A F G    +A   P+ I     G+L
Sbjct: 153 ISMLGGVGCFPILIQLPFFSAIYFAAQHTEGVSEASFMG----IALGSPSWILLACAGVL 208

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLI 539
            +        G+                     + Q   + +M P++ V      PA + 
Sbjct: 209 YYLQSLLSLHGV----------------EDETQREQLKKMIYMSPLMIVMFSIFSPASVT 252

Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           +Y+    +I I QQ +I   +     L  ++R  F+KN   
Sbjct: 253 LYFVVGGIIMIFQQFIIN--YLIRPKLRKKVREEFAKNPPK 291


>gi|170077612|ref|YP_001734250.1| putative inner membrane protein translocase component YidC
           [Synechococcus sp. PCC 7002]
 gi|169885281|gb|ACA98994.1| inner membrane protein YidC/OxaA [Synechococcus sp. PCC 7002]
          Length = 388

 Score = 54.2 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 6/121 (4%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           +D+G  +     M  ++ +FY +V ++G AI+  T+ ++   +PL+ K   S    K  Q
Sbjct: 1   MDFGIGFLSNNVMLPILDFFYGIVPSYGFAIIALTLVIRFAVYPLSAKSIRSMRRTKITQ 60

Query: 394 PKIDEL----REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           P + +     +E++K  P +  Q+A +        NPLAGC PILLQ+P+ FA++  +  
Sbjct: 61  PLMQKRVKEIQERYKNDPAK--QQAAMSEVYKEFGNPLAGCLPILLQMPILFALFATLRG 118

Query: 450 S 450
           S
Sbjct: 119 S 119



 Score = 43.8 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 7/63 (11%)

Query: 521 NWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578
              P++F      FP  AG+++Y + +N    VQ  ++      +  L + L+    +  
Sbjct: 310 KITPLIFSGMFLFFPLPAGVLMYMTIANAFQTVQTFILT-----KEPLPENLQKLVDEQE 364

Query: 579 NSQ 581
            S+
Sbjct: 365 KSE 367


>gi|315056141|ref|XP_003177445.1| inner membrane protein COX18 [Arthroderma gypseum CBS 118893]
 gi|311339291|gb|EFQ98493.1| inner membrane protein COX18 [Arthroderma gypseum CBS 118893]
          Length = 336

 Score = 54.2 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 69/208 (33%), Gaps = 73/208 (35%)

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH------------ 455
            Q  +    +LYK   I P    +   LQ+P++ A+ + +   + M              
Sbjct: 131 QQDFKLKRKELYKRWKIRP-WASYASFLQLPIWLAMMESLRRMVGMSGGLLSIIQSWIES 189

Query: 456 ---------------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
                          A    W  DL  ADPT+                     PII++ +
Sbjct: 190 KADAQPVIQVEPSMAAEGALWFPDLLMADPTH-------------------ALPIILAAT 230

Query: 501 MFIQ-------------MKMSPPPADKGQA-MILN--------WMPVVFVFALSSFPAGL 538
           MF                KM    A + +A  IL         W+  V +++ +  PAGL
Sbjct: 231 MFTNVTWGWKVKSAAEISKMRRSEAIRERAFKILKRILQGLSIWLAPVMIYSGA--PAGL 288

Query: 539 IIYWSWSNVISIVQQAVIMK--MHGAEI 564
           +IYW  S+  +  Q  ++ +     A  
Sbjct: 289 LIYWISSSTFATAQTQIVRRVIRTKAPP 316


>gi|289524495|ref|ZP_06441349.1| stage III sporulation protein J [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289502264|gb|EFD23428.1| stage III sporulation protein J [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 104

 Score = 53.8 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 40/104 (38%), Positives = 72/104 (69%), Gaps = 1/104 (0%)

Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405
           M  ++++FY +  ++GIAI+L T+ +++L +PL+ KQ VS   M+ IQP++  L+EK+K 
Sbjct: 1   MLGVLNFFYEISNSYGIAIILLTILIRILLYPLSHKQLVSMKKMQQIQPRLKTLQEKYKD 60

Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
              Q L + +++LYK + +NP AGC P+L+Q+P+   +++VI  
Sbjct: 61  -DRQKLNQEVMKLYKEYGVNPAAGCLPLLVQLPILILLFRVIMN 103


>gi|320594158|gb|EFX06561.1| hypothetical protein CMQ_6882 [Grosmannia clavigera kw1407]
          Length = 438

 Score = 53.8 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 43/154 (27%), Gaps = 33/154 (21%)

Query: 442 AIYKVISISLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI----- 495
           A+   +  +LE         W  DL  ADP ++      LP  L   +   + P      
Sbjct: 278 AVLSALPSTLEPSLTTGGCLWFPDLTVADPYHV------LPLALSAMLIANVLPATDAGR 331

Query: 496 --IMSLSMFIQMKMSPPPADKGQ-----------AMILNWMPVVFVFALSSFPAGLIIYW 542
             +  L        S P     Q              L  M     F    FPA + +YW
Sbjct: 332 RALFGLG---PQSSSSPVGGTAQVTTEGAFGRGLQRTLLIMSASIGFVTMHFPAAIHLYW 388

Query: 543 SWSNVISIVQQAVIMKMH-GAEIGLIDRLRSTFS 575
             S   S     VI +    A       ++    
Sbjct: 389 LSSAATS----FVITRSLRKARPLPERNIKPANK 418


>gi|297160114|gb|ADI09826.1| hypothetical protein SBI_06706 [Streptomyces bingchenggensis BCW-1]
          Length = 240

 Score = 53.8 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 10/130 (7%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
              AI+L T+ V+    PLA+           + PK+ EL  +  +  P+ L+ AM +LY
Sbjct: 27  TAAAIVLFTLCVRAALHPLARAAVRGEKARAALAPKVAELNRRH-KRDPERLRHAMAELY 85

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISI--------SLEMRHAPFWG-WIKDLAAADP 470
           +  +++P+AGC P L+Q+PVFF +Y + S            +  AP  G W  DLA    
Sbjct: 86  EKESVSPVAGCLPTLVQLPVFFVMYHLFSTGSGAGDLLDHTLAGAPLGGRWGGDLAGPHG 145

Query: 471 TNIFTLFGIL 480
                LF ++
Sbjct: 146 AVYLALFVLI 155


>gi|327294149|ref|XP_003231770.1| hypothetical protein TERG_07389 [Trichophyton rubrum CBS 118892]
 gi|326465715|gb|EGD91168.1| hypothetical protein TERG_07389 [Trichophyton rubrum CBS 118892]
          Length = 316

 Score = 53.8 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 54/270 (20%), Positives = 93/270 (34%), Gaps = 41/270 (15%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM-LTTVFVKL-LFFPLAKKQYVST 386
            F                  ++  F+++ G   +  + LT + V+L        +     
Sbjct: 30  NFHASNPNRIIDSSILVAHDVIQGFHSITGLPWVLSIPLTAITVRLNPLLLTWSRVCQKK 89

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
           A  + I        +  + S  Q  +    +LYK   I P A    IL Q+PV+ A+ + 
Sbjct: 90  AMDEAIMKGRHLFPKTIEASWQQDFKLKRKELYKRWKIRPWASYASIL-QLPVWLAMMES 148

Query: 447 ISISLEMRHAPFWG---WIKDLAAADPTNI------FTLFGILPF-YLPGFMHVGIWPII 496
           +   + M          WI+  +  D   I        + G L F  L         P+I
Sbjct: 149 LRRMVGMSGGLLSIIQSWIE--SKVDGARIIEVEPSMAIEGALWFPDLLIGDPTHALPVI 206

Query: 497 MSLSMFIQMK-----MSPPPADKGQA---------MILN--------WM-PVVFVFALSS 533
           ++ +MF  +       S     K Q           IL         W+ PV+     S 
Sbjct: 207 LAATMFTNVTWGWKVKSAAEISKLQRSEAIRERAFKILKRVLQGLSIWLAPVM---IYSQ 263

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
            PAGL+IYW  S+  +  Q  ++ ++   +
Sbjct: 264 APAGLLIYWISSSTFATAQTQIVRRVMQTK 293


>gi|145480521|ref|XP_001426283.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393357|emb|CAK58885.1| unnamed protein product [Paramecium tetraurelia]
          Length = 362

 Score = 53.8 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 85/233 (36%), Gaps = 28/233 (12%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
               F  +      +++Y ++    +   + LT +  +    PL   Q   T  +  + P
Sbjct: 62  PLQVFDPVVDFGSGILTYLHDCHIPWVGVLSLTCIIARSTLLPLIYLQMKRTTRLATVIP 121

Query: 395 KIDELREKFKQSPPQVLQKAM--IQLYKTHNINP----LAGCWPILLQIPVFFAIYKVIS 448
            I +++    ++     +K    ++L      +     +      +  IP+   +   I 
Sbjct: 122 AIAQMKRLIDKTNYSKPKKFFTLMRLSYKIVHSQRLKWMRLFLYNVFHIPMLITLIWSIR 181

Query: 449 ISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
             L  E      + WI  L+  DP  I     ++ +Y                   +Q  
Sbjct: 182 RLLIDESFKTTAFLWIPSLSNMDPYFIVPALTVICYYYN-----------------LQRF 224

Query: 507 MSPPPADKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           ++P   D   +    +  ++ ++++  L+++P  + IY  ++   SI+Q +++
Sbjct: 225 ITPENKDTLPSKLRNVGQFLLILWLPFLANWPCAIQIYMLFNAFFSIIQTSIM 277


>gi|170096969|ref|XP_001879704.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164645107|gb|EDR09355.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 394

 Score = 53.5 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 86/242 (35%), Gaps = 41/242 (16%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           W     +A    ++          +   I+  +   +L   P A +   ++A M+ IQ +
Sbjct: 124 WSPIGLVAWTYEVINVTT---GLPWFWTIVAGSTVCRLFCLPFAIRAARASARMRGIQTE 180

Query: 396 IDELREKFKQSP-------PQVLQKAMIQLYKTHNINPLAGCWPILLQ-----IPVFFAI 443
           + ++REK   +         Q     M  LY    +  +       +      I +FFA 
Sbjct: 181 MTKVREKIGTAAKTGDPVAQQRATLEMQALYSKAGVKIMRDMIVPAVVQVPVAIGMFFAT 240

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
            ++  + +       +  + DL  ADPT                    I PI +   + +
Sbjct: 241 KRMCELPVAQLKDSGFSLLPDLTVADPTM-------------------ILPIALCAVVNV 281

Query: 504 QMKM-----SPPPADKGQAMI--LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           Q+ +     +          +     + V+ +F + S P+GL +    +++++ VQ  ++
Sbjct: 282 QISLGGKDINAKDVPDMGHYMNCFRGLSVLGMFFMHSLPSGLFVAMLTTSILTGVQSVIL 341

Query: 557 MK 558
            K
Sbjct: 342 RK 343


>gi|146321575|ref|YP_001201286.1| preprotein translocase subunit YidC [Streptococcus suis 98HAH33]
 gi|145692381|gb|ABP92886.1| Preprotein translocase subunit YidC [Streptococcus suis 98HAH33]
          Length = 83

 Score = 53.5 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
              PAG+ +YW    +  I+QQA+       +  +  ++   F  
Sbjct: 1   MGLPAGVTLYWVVGGLFGILQQAITN--FILKPRIRKQVEEEFKN 43


>gi|315503883|ref|YP_004082770.1| membrane protein insertase, yidc/oxa1 family [Micromonospora sp.
           L5]
 gi|315410502|gb|ADU08619.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora sp.
           L5]
          Length = 248

 Score = 53.5 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 77/214 (35%), Gaps = 24/214 (11%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L TV V+LL  PL   Q         + P++ EL+ ++   P   LQ  +  LY+   
Sbjct: 38  IVLFTVAVRLLISPLTVAQVRGERRRTALAPEVRELQRRYADDPA-RLQSELFALYRNAG 96

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
            +P+AGC P LLQ P F  +Y+ +  + +   AP     +                    
Sbjct: 97  ASPVAGCLPALLQAPFFLVMYR-LFATGD--GAPELLGERLAGVP-----LGWHLGDGLA 148

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKM-------------SPP--PADKGQAMILNWMPVVFV 528
            P  +  G+    +    +   +              +P   P       +L  +P   V
Sbjct: 149 GPVPLVFGVLLAALLALAWWSSRRMRRASAATGTVAGTPAEGPGAAVLGRVLPLLPYGTV 208

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
                 P   ++Y   +   + ++Q V+ +   A
Sbjct: 209 LVALVVPLAAVLYLVTTTAWTALEQVVLRRPQPA 242


>gi|329768493|ref|ZP_08259982.1| hypothetical protein HMPREF0428_01679 [Gemella haemolysans M341]
 gi|328836721|gb|EGF86376.1| hypothetical protein HMPREF0428_01679 [Gemella haemolysans M341]
          Length = 293

 Score = 53.5 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 74/201 (36%), Gaps = 8/201 (3%)

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINP--LAGCWPILLQIP 438
                  ++  + ++    E+ K    Q   +  + ++YK ++ +P       PIL+Q P
Sbjct: 94  VQEKIKQLRESEKRVFSNDERMKIRMEQAELQREIFKIYKKYDCSPAIFGNLIPILIQAP 153

Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
               +Y  +   +  +      ++  ++  + + I  +   + + + G +       +M 
Sbjct: 154 FVTGLYFTLQNPIYSKDILNSSFLS-ISLGEKSYIILILVFIVYMVVGKISQS----MMQ 208

Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558
            +   Q              ++   P++  F   +  A + IY+  S ++ I Q ++  K
Sbjct: 209 ANPMAQTNPEAERMQNMSKNMVWITPIMLTFITYTSIAAIGIYFIVSGILVIFQISLGRK 268

Query: 559 MHGAEIGLIDRLRSTFSKNYN 579
           ++   I  +  ++S       
Sbjct: 269 LYPPYIPKLTTIKSKKVTKNK 289


>gi|325990152|ref|YP_004249851.1| membrane protein OxaA [Mycoplasma suis KI3806]
 gi|323575237|emb|CBZ40902.1| Membrane protein OxaA [Mycoplasma suis]
          Length = 341

 Score = 53.5 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/333 (11%), Positives = 99/333 (29%), Gaps = 28/333 (8%)

Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG---AKEFPTIHHYEKDLAI 327
           F S F               A   +    ++       F        +  +         
Sbjct: 7   FQSMFTSYVFHSNEAGVGLEAAYHSGSSQRTNDLRYDAFPWTPNPWAYWPLVSSGNGFGP 66

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMS--YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
               ++  +   +      F      +      N   +I++  + +K + F    +    
Sbjct: 67  FIMWLVYPFTRVFLYLIWTFRGTQDSFMDKSGLNVVCSILIILLVMKSIVFLTIFRAQYY 126

Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN---------PLAGCWPILLQ 436
           +   +  +  ++ ++ K+        +   + + +   ++         P +      + 
Sbjct: 127 SDLQQRHKKNLERIKSKYTTDKFDRKELRTMSVLRQQEVSRYCKKHGLKPFSALENFFIN 186

Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
            P+F  IYK+++I+  ++ +  +G I   +      IFT F  + +    F  + I   +
Sbjct: 187 TPIFLVIYKLMTITRPVKFSKLFG-IMPFSKTPINMIFTDFLSVGWVYILFFAIAIPVNL 245

Query: 497 MS--LSMFIQMKMSPPPADK-----------GQAMILNWMPVVFVFALSSFPAGLIIYWS 543
            S  +   +  K  P   D                + N + V  +     +   L +Y+ 
Sbjct: 246 YSQKIPSRLMKKRFPSLQDDVSLKVKDINVLSSKKLQNIISVSLIIFSLFWSTSLAVYYF 305

Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576
           ++++ +I    +I  +          L      
Sbjct: 306 FNSLFNIAFSYIIHSILKKRKEKESALTKKLKN 338


>gi|307329913|ref|ZP_07609066.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces
           violaceusniger Tu 4113]
 gi|306884404|gb|EFN15437.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces
           violaceusniger Tu 4113]
          Length = 220

 Score = 53.5 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 10/153 (6%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L T+ V+    PLA+           + PK+ EL  K K   P+ L++AM +L     
Sbjct: 31  IVLFTLCVRAALHPLARAAVRGEKARAALAPKLTELSRKHKG-DPERLRRAMAELRAKEG 89

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
            +PLAGC P L Q+PVFF +Y V S       A          A     +   +G     
Sbjct: 90  ASPLAGCLPALAQLPVFFVMYHVFST---GSGAGDLLDHTLAGAP----LGARWGGALSG 142

Query: 484 LPGFMHVGIWPIIMSLSMF--IQMKMSPPPADK 514
            PG +H+G++ +I +++ +  ++ + +  P   
Sbjct: 143 APGLVHLGLFALIAAVATWTYLRARRTTAPGAP 175


>gi|62858651|ref|NP_001016333.1| COX18 cytochrome c oxidase assembly homolog [Xenopus (Silurana)
           tropicalis]
          Length = 381

 Score = 53.5 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 75/272 (27%), Gaps = 57/272 (20%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           +           F           +     ML+S        +   I+  TV ++     
Sbjct: 87  LSAASTGNTGSAFGWYESLADTAPVNLAESMLISLHETSGMPWWANIICATVSLRTTITL 146

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSP-------------------PQVLQKAMIQL 418
                 +             +   K  +                      + L++ +  L
Sbjct: 147 PLSVYQMYILAKVENLQPEIDALAKQLRYEVSVYGKQHGWTDKVARFQFRKNLRRIISGL 206

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH-------------------APFW 459
           Y   N +P      I +QIP++        +S+ +R+                       
Sbjct: 207 YVRDNCHPFKASLLIWIQIPMWI------FVSIALRNISLNRADSATGDAVQKQLTEGGL 260

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            W  DL   D T I              + +G+  ++  + +F   K+      K     
Sbjct: 261 LWFPDLTMPDSTWILP------------VTLGLLNLL-IVEIFALRKIELSRFQKIITNF 307

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
           +  + +  +   S+ P+ + +YW  S+ + + 
Sbjct: 308 IRAVSIAMIPIASTVPSSMALYWVTSSCVGLA 339


>gi|332016649|gb|EGI57514.1| Mitochondrial inner membrane protein COX18 [Acromyrmex echinatior]
          Length = 297

 Score = 53.5 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 75/257 (29%), Gaps = 35/257 (13%)

Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL---------- 378
           +F  +          K     +   ++  G    ++++ T  +      L          
Sbjct: 2   QFNGIFKAISESAPIKITQDFLLLVHDYTGLPWWSVIVLTTIMMRTAVTLPLSLYQLYIL 61

Query: 379 ---------AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI-QLYKTHNINPLA 428
                      +         N         +K+ +            +L    N +P  
Sbjct: 62  AKLENLKYEMDEIVKEMKKEINYGIHKYNWSKKYAKRLYNHSVAKQWNKLIVRENCHPAK 121

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
                L+Q+P++ ++      S+ +R+  +    +D  A      F   G L        
Sbjct: 122 TSLLALIQVPLWISL------SMSIRNLCYMLPKQDANAYITYQEFITDGFLWMSNLTTA 175

Query: 489 HVGIWPIIMSLSMFI------QMKMSPPPADKGQAMILNW---MPVVFVFALSSFPAGLI 539
              + PI M L            K+      K Q  + N+     +  +    S P+ L 
Sbjct: 176 DPFVLPISMGLFNLAIIEITCMSKVQNVELTKWQRYLTNFCRIATIGMIPIAMSVPSCLS 235

Query: 540 IYWSWSNVISIVQQAVI 556
           +YW+ S+   + Q  ++
Sbjct: 236 LYWATSSAFGLFQNLIL 252


>gi|221185888|gb|ACM07437.1| mitochondrial translocase [Chlamydomonas reinhardtii]
          Length = 449

 Score = 53.5 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/344 (13%), Positives = 100/344 (29%), Gaps = 44/344 (12%)

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
           D   S  S     ++W   S + + S      +    +      +         +     
Sbjct: 45  DQRGSGGSWQQHQHAWGSSSHRTFFSFARKKPDAGAVAAASTGDETSISGSEPVADPTPV 104

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKD-LAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
             P           +            +   A+ R  ++      +F A      +   +
Sbjct: 105 GPP----EFFPLPESAPDAIEVASAIHQACSALERASIMSAKADAFFSASWCISGLQAVH 160

Query: 355 NLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413
           +L+   + ++I +  + ++LL FPL       +A M      +   ++  + +     Q+
Sbjct: 161 DLLDTPWFLSIAIFNITLRLLTFPLMVVAQKGSAKMMEFNHNLIHAKKLQEAAMKATSQE 220

Query: 414 AMIQLY------------------KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
              +L+                  KT  + P        + + +F  + K+++  +    
Sbjct: 221 EHQRLFQAFRNEYNVQTAKHGDPVKTALVVPGVMILNGAIFLSIFNGVSKLMAAKVPSLT 280

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
                W  DL + DP     L             +     +   +        P P D+ 
Sbjct: 281 TGGALWFSDLTSPDPYFGLPLMCTAVTLAMVEYGIN----LAGDA-------GPMPEDR- 328

Query: 516 QAMI-------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            A +       +  M  +F+ A     AG  + W  +    +VQ
Sbjct: 329 -AKMTNGLKNFMRVMAFMFIPAGGYVAAGTAVLWVSNTAFGVVQ 371


>gi|242011303|ref|XP_002426393.1| cytochrome oxidase biogenesis protein, putative [Pediculus humanus
           corporis]
 gi|212510480|gb|EEB13655.1| cytochrome oxidase biogenesis protein, putative [Pediculus humanus
           corporis]
          Length = 361

 Score = 53.1 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 82/280 (29%), Gaps = 38/280 (13%)

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF-EMLIDWGWFYFIAKPMFMLMSYFY 354
               ++ ++  F          +      +AI  F   L D     + ++ + +      
Sbjct: 55  FQQSRNFSSEYFQELNTNIHNFVTTNAPTVAIKNFLIELHDMSGLPWWSEILLVTAGMKL 114

Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414
            +    G+        + L     +       + +  +  +      K +++     +  
Sbjct: 115 VIGLPIGVFQQHIIAKINLTKMQHSIICKKLESELSLMARRGKWSDMKKQRAFITQQKMI 174

Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE----------MRHAPFWGWIKD 464
              L   +N +P          +P +  +   I    E                  W  +
Sbjct: 175 WSDLVVKNNCHPFKLVILTWAHLPPWILLSFSIRSLCEKDLVSPMTYLQLQTEGLFWNSN 234

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD---KGQ 516
           L   DP                     I P+ + LS ++   +        P     K  
Sbjct: 235 LIQPDPYF-------------------ILPVTLFLSTYLFQDLIQLSIGRKPTSFFLKVF 275

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           + I  +  V+F+   +  P+GL +YWS S + SI Q  ++
Sbjct: 276 STIFRFSAVLFLIVGAIVPSGLSLYWSVSILCSIAQHLLL 315


>gi|294886793|ref|XP_002771856.1| cytochrome oxidase biogenesis protein, putative [Perkinsus marinus
           ATCC 50983]
 gi|239875656|gb|EER03672.1| cytochrome oxidase biogenesis protein, putative [Perkinsus marinus
           ATCC 50983]
          Length = 420

 Score = 53.1 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 104/301 (34%), Gaps = 62/301 (20%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLF 375
           +     D A  R   L      Y     M  L+   ++ +        I +    V+++ 
Sbjct: 75  LMERCVDEAHARGAELASSYDPYLPVDLMQSLIITIHDYMPGHSWMASIAVAATVVRIMV 134

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN--------INPL 427
            PL      +    + I P++D L  + K++  +  Q+ +I+    ++        +  +
Sbjct: 135 LPLLISSMRAGRIKQRIMPQLDALSAEMKEAEKKGSQQQLIRAQTKYSQFIKEHGSMVTM 194

Query: 428 AGCWPILLQIPVF----FAIYKVISISLEMRHAPF--WGWIKDLAAADPTNIFTLFGILP 481
            G   + +QIP+F     ++ ++ +     +  P     W+  LA +DP           
Sbjct: 195 KGMMGMFVQIPIFTTAFLSMRQMSNHPHIFKGFPMETPLWLDSLALSDP----------- 243

Query: 482 FYLPGFMHVGIWPIIMSLSM-----FIQMKMSPPPADK------------GQAMILNW-- 522
                   + + P++ S  +     F     S   A+              Q  +  +  
Sbjct: 244 --------IIVLPVLASALLLTNIEFFGSLDSAQAAEAGDRPDTKNKLGIDQKTMQKYSR 295

Query: 523 -----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE--IGLIDRLRSTFS 575
                + V+ + A    PAGL +Y   + + +I Q   I+++   E  + +   ++    
Sbjct: 296 HGFRALCVIALPATMYLPAGLFVYTCTNALWAITQNR-ILRLPIVEQALNIPHNIKKEEK 354

Query: 576 K 576
           K
Sbjct: 355 K 355


>gi|284031357|ref|YP_003381288.1| 60 kDa inner membrane insertion protein [Kribbella flavida DSM
           17836]
 gi|283810650|gb|ADB32489.1| 60 kDa inner membrane insertion protein [Kribbella flavida DSM
           17836]
          Length = 225

 Score = 53.1 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 77/211 (36%), Gaps = 7/211 (3%)

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
           +P F      G ++ ++     +            +AI++ T+ V+LL  PL+       
Sbjct: 1   MPSFLDAPVSGAYHLVSWLATTIEPLGGPYA--AALAIVVCTIAVRLLLLPLSLAAVRGE 58

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
            +   + P+I E+  +   +P +  Q+ + +L         AGC P+  Q+P F+ +Y +
Sbjct: 59  KSRSVLMPQIQEISRRHAGNPERA-QREIAKLQAESGTTLFAGCLPMFAQLPFFWVLYSL 117

Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506
            S ++    +          A    + + LF   P Y+       +  ++   S   Q+ 
Sbjct: 118 FSRTVVAGESNHLLAGTLFGAPLGVH-WPLFASTPAYVG---LAVLLAVVACFSARRQLA 173

Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAG 537
                A      +   +P   +   +  P  
Sbjct: 174 RLHETATPMSRNLARLLPFGTLVTAAFIPLA 204


>gi|213627320|gb|AAI71112.1| hypothetical protein LOC549087 [Xenopus (Silurana) tropicalis]
          Length = 381

 Score = 53.1 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/275 (12%), Positives = 79/275 (28%), Gaps = 63/275 (22%)

Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377
           +           F           +     +L+S        +   I+  TV ++     
Sbjct: 87  LSAASTGNTGSAFGWYESLADTAPVNLAESLLISLHETSGMPWWANIVCATVALRTTVTL 146

Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSP-------------------PQVLQKAMIQL 418
                 +             +   K  +                      + L++ +  L
Sbjct: 147 PLSVYQMYILAKVENLQPEIDALAKQLRYEVSVYGKQHGWTDKVARFQFRKNLRRIISGL 206

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH-------------------APFW 459
           Y   N +P      I +QIP++        +S+ +R+                       
Sbjct: 207 YVRDNCHPFKASLLIWIQIPMWI------FVSIALRNISLNRADSATGDAVQKQLTEGGL 260

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            W  DL   D T I              + +G+  ++  + +F   K+      + Q +I
Sbjct: 261 LWFPDLTMPDSTWILP------------VTLGLLNLL-IVEIFALRKI---ELSRFQKII 304

Query: 520 LNWM---PVVFVFALSSFPAGLIIYWSWSNVISIV 551
            N++    +  +   S+ P+ + +YW  S+ + + 
Sbjct: 305 TNFIRAVSIAMIPIASTVPSSMALYWVTSSCVGLA 339


>gi|255023194|ref|ZP_05295180.1| OxaA-like protein precursor [Listeria monocytogenes FSL J1-208]
          Length = 191

 Score = 52.7 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 11/140 (7%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393
            Y +      +M     +  N+G+AI++TT+ ++ L  PL  +   +   M++       
Sbjct: 36  TYLVQPFTSFIMFVASFVGDNYGVAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95

Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449
                   L+    +     +QK M+ +Y  +NINP+  GC P+L+Q+P+  A Y  I  
Sbjct: 96  EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155

Query: 450 SLEMRHAPFWGWIKDLAAAD 469
           S E+  +  + W  +L ++D
Sbjct: 156 SSEIA-SHTFLWF-NLGSSD 173


>gi|113478085|ref|YP_724146.1| putative inner membrane protein translocase component YidC
           [Trichodesmium erythraeum IMS101]
 gi|110169133|gb|ABG53673.1| 60 kDa inner membrane insertion protein [Trichodesmium erythraeum
           IMS101]
          Length = 382

 Score = 52.7 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 68/208 (32%), Gaps = 12/208 (5%)

Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
              +   +    +  + +  +   Q+        +++ Y    I PL        ++ + 
Sbjct: 159 HYQILALSPNGDKLIVGDKTKVEFQTVEGKSLNTLMEEYNQSEIKPLWTVTKGAERVQID 218

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMS 498
                V     E         I   +      I  L  +  F   G +H  + I  I   
Sbjct: 219 QDGSLVALEPGEATIQGTIPGIA--SNKGFLFIKALGRVGAFDENGNIHWDILIMVIGFG 276

Query: 499 LSMFIQMKMSPP-----PADKGQAMILNWMPVVF--VFALSSFPAGLIIYWSWSNVISIV 551
           +S++    +S        A+  Q  I    P++F  +F  +  PAG+++Y   +N+   +
Sbjct: 277 VSIYASQTISGKGPGANNANPNQDSINKITPILFSGIFLFTPLPAGVLLYMLIANIFQTI 336

Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYN 579
           Q A I+        L   +  +  K   
Sbjct: 337 Q-AYILSKEPLPENLQKLVEESQPKTTK 363


>gi|126330826|ref|XP_001375072.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 386

 Score = 52.7 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 64/234 (27%), Gaps = 50/234 (21%)

Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403
               M +         +  +I++TT  ++                         ++  K 
Sbjct: 119 WAEAMFLGAQGATGLPWWASIVVTTAALRSAVTLPLAVYQHYILAKVENLQPEIKIIAKN 178

Query: 404 KQSPPQVLQKA-------------------MIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
                    K                    + +LY   N +P      + +QIP++  + 
Sbjct: 179 LNYDIAFRAKQLGWSKRVTRLTYLNNMRRIVSELYIRDNCHPFKATLLVWIQIPMWVFMS 238

Query: 445 KVISISL------------EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
             +                E        W  DL   D T I              + +GI
Sbjct: 239 VALRNFSLGITDSEGFSIQEQFSTGGVLWFPDLTLLDSTWILP------------VSLGI 286

Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYWS 543
             ++  + +F   K+        Q  I  +   + V+ +   ++ P+ + +YW 
Sbjct: 287 LNLL-IVEIFALQKLEMSR---FQKYITYFTRGISVLMIPIAATVPSAIALYWF 336


>gi|326472840|gb|EGD96849.1| hypothetical protein TESG_04277 [Trichophyton tonsurans CBS 112818]
          Length = 305

 Score = 52.3 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 68/206 (33%), Gaps = 73/206 (35%)

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH------------ 455
            Q  +    +LYK   I P A    IL Q+PV+ A+ + +   + M              
Sbjct: 99  QQDFKMKRKELYKRWKIRPWASYASIL-QLPVWLAMMESLRRMVGMSGGLLSIIQSWIES 157

Query: 456 ----APFW-----------GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
               AP              W  DL  ADPT+                     P++++ +
Sbjct: 158 KVDGAPIIEVEPSMATEGALWFTDLLIADPTH-------------------ALPVVLAAT 198

Query: 501 MFIQMK-----MSPPPADKGQ-------------AMILNWM-----PVVFVFALSSFPAG 537
           MF  +       S     K Q               +L  +     PV+     S  PAG
Sbjct: 199 MFTNVTWGWKVKSAAEISKLQRSEAIRERAFKTLKRVLQGLSIWLAPVM---IYSQAPAG 255

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563
           L+IYW  S+  +  Q  ++ ++   +
Sbjct: 256 LLIYWISSSTFATAQTQIVRRVMRTK 281


>gi|294659963|ref|XP_002770675.1| DEHA2G20064p [Debaryomyces hansenii CBS767]
 gi|199434365|emb|CAR66007.1| DEHA2G20064p [Debaryomyces hansenii]
          Length = 341

 Score = 52.3 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 60/200 (30%), Gaps = 28/200 (14%)

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE- 452
           P      E+      +  +K    L+K H++           QIP++  +   +      
Sbjct: 137 PVATMKYEEILLLATKETRKRQKALFKKHDVQLWKNIILPAFQIPLWVCMSWTMRDLSGW 196

Query: 453 -----MRHAP--------FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
                + + P           W  DL   DP +IF L   +              +    
Sbjct: 197 SSWDSLANKPLDSSLYTEGLFWFTDLTTLDPMHIFPLILGVISLCNVEWTFKTLEL---- 252

Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI--- 556
           S F + ++  P      + +     V  +    + P  L +YW  S V S++Q  ++   
Sbjct: 253 SRFTRKRLGRPTLTDSMSSVARMSVVFMMAISLNAPVALTLYWLSSQVYSLIQNIILDLM 312

Query: 557 -------MKMHGAEIGLIDR 569
                   K  G +      
Sbjct: 313 IPISFTPNKRFGYKTSSKSN 332


>gi|242223592|ref|XP_002477400.1| predicted protein [Postia placenta Mad-698-R]
 gi|220723056|gb|EED77400.1| predicted protein [Postia placenta Mad-698-R]
          Length = 228

 Score = 52.3 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 79/191 (41%), Gaps = 29/191 (15%)

Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV----F 440
            T  + +++ K+   ++       Q +      +Y+   ++ +      ++Q+PV    F
Sbjct: 4   YTDEINDLRDKMQTAQKTRDMLTLQSVAMKQRMIYEKAGVSMVGMAILPIVQLPVTLGMF 63

Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
           F + K+    LE        ++ DL  ADPT                   GI P++ +++
Sbjct: 64  FGVKKLCDFPLEQLKHSGVSFLPDLTLADPT-------------------GILPVVSAVA 104

Query: 501 MFIQMKM---SPPPADKGQAMI--LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555
           M IQ+ +       A     MI     + +V +  + + P+G+++Y   S++ ++  Q+V
Sbjct: 105 MNIQLTLGARDMVTAPHMAHMINFFRVLSLVGIPLMWNLPSGVLVY-VISSITAMSIQSV 163

Query: 556 IMKMHGAEIGL 566
           +++       L
Sbjct: 164 VLRQPAVRRAL 174


>gi|124512218|ref|XP_001349242.1| mitochondrial inner membrane translocase, putative [Plasmodium
           falciparum 3D7]
 gi|23499011|emb|CAD51091.1| mitochondrial inner membrane translocase, putative [Plasmodium
           falciparum 3D7]
          Length = 589

 Score = 52.3 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 81/242 (33%), Gaps = 24/242 (9%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395
           +   +++     +L S        +  +I++TT+F++++  PL           K + P 
Sbjct: 302 YENTWYVKLIYDLLNSTKLFFDCTWMSSIIMTTLFMRIIILPLTISSERDRRKQKILSPL 361

Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTH---------NINPLAGCWPILLQIPVFFAIYKV 446
           + EL +K K +      K  ++  K           ++ P +       Q P+FF  Y  
Sbjct: 362 LKELTKKLKDNAQDGNIKKAVEFKKKILNIRNTHGISLIPKSIILMAFFQTPLFFIFYFS 421

Query: 447 I------SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
           +          +        W+  L+  DP  I  +   L       + + I   I    
Sbjct: 422 MKRIASYPDIFKDFTFESPLWLDSLSLPDPYYILPILSSLLLLSNNELTLLIDKKIN--E 479

Query: 501 MFIQMKMSPPPADKGQAMI-------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
              Q  ++     + Q  +       +    +  V    S P+GL IY+  +    +   
Sbjct: 480 NNKQSNLNNQEETEFQKNMKKITKLAMRLFYLSSVLFFKSMPSGLFIYFITNTFFQLFIT 539

Query: 554 AV 555
            +
Sbjct: 540 QI 541


>gi|313112582|ref|ZP_07798243.1| inner membrane protein [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310625104|gb|EFQ08398.1| inner membrane protein [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 137

 Score = 52.3 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
               +FY ++ P+  +M + Y L+ ++G  I++ T+ + ++  PL   Q  S A M   Q
Sbjct: 3   KGMNFFYILSGPLGYVMEWIYKLLPSYGWDIIIFTLLINIVKIPLQLSQQKSMAKMSAFQ 62

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
           P + E++ K+K   P+  Q+ M++L + +  NP AGC P+LL   V F +  V+   LE
Sbjct: 63  PMMMEIQTKYKD-KPEKQQEEMLKLQQDYGYNPTAGCVPMLLNFLVMFGVIGVVYNPLE 120


>gi|295659171|ref|XP_002790144.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226281849|gb|EEH37415.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 360

 Score = 51.9 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 47/147 (31%), Gaps = 22/147 (14%)

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           G   IL Q     A    + +   +     + W  DL A+DP  +         +     
Sbjct: 197 GLLVILQQWISPDAAKAQVPVEPSLSTEGAF-WFPDLVASDPLYVLPFAISALMFTHITW 255

Query: 489 HVGI-----WPIIM------SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537
              I      PI+        +  +   ++        QAM +   P       S  P+ 
Sbjct: 256 GSKICKAKELPILASQGNLQGIFSWAIQRIF-------QAMSIWIAP---ALMYSEAPSA 305

Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEI 564
           L IYW  +  ++I+Q  ++ K      
Sbjct: 306 LGIYWLTTTSVAIIQSRLLKKFMPFPT 332


>gi|154308874|ref|XP_001553772.1| hypothetical protein BC1G_07965 [Botryotinia fuckeliana B05.10]
 gi|150852591|gb|EDN27783.1| hypothetical protein BC1G_07965 [Botryotinia fuckeliana B05.10]
          Length = 330

 Score = 51.9 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 41/154 (26%)

Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF- 458
            ++   +   + +  + ++YK   I+      P  +QI + +  +K+      +R     
Sbjct: 61  EKEGDTAEMMLHRAELQRIYKRAGISMWKSFVPA-VQIFIGYGTWKL------LRQMSDV 113

Query: 459 ---------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII-----MSLSMFIQ 504
                      W  +L+  DP        +LP    G +H     ++       +S    
Sbjct: 114 PVPGLLDGGILWFYNLSIPDPYF------LLPLATSGILHY----VLKKGGETGVST--- 160

Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
             ++P      Q      MP++ +   S  PA +
Sbjct: 161 --LTPGMVTAMQ----WGMPLLSMIFTSFMPAAV 188


>gi|271961730|ref|YP_003335926.1| inner membrane protein translocase component YidC
           [Streptosporangium roseum DSM 43021]
 gi|270504905|gb|ACZ83183.1| putative inner membrane protein translocase component YidC
           [Streptosporangium roseum DSM 43021]
          Length = 231

 Score = 51.9 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 1/123 (0%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            F  + +    L++     +G+  +AI+L T+ V+LL  PL+  Q         + P++ 
Sbjct: 1   MFDPVIEFTADLITALAQPLGSTALAIVLFTLGVRLLLLPLSVMQARGERVRARLAPEVQ 60

Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
           ELR +     P+ L + +  LY     +PLAGC P   Q+P F  +Y+V + S+   HA 
Sbjct: 61  ELRRRH-GRDPERLHRELTALYAGEKASPLAGCLPGFAQMPFFMLMYQVFASSVIAGHAN 119

Query: 458 FWG 460
              
Sbjct: 120 ALL 122


>gi|6166302|gb|AAF04771.1|AF104228_1 stage III sporulation protein J homolog [Listeria monocytogenes]
          Length = 88

 Score = 51.5 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 4/83 (4%)

Query: 384 VSTANMKNIQPKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440
            S   M N+QPKI EL+EK+        Q LQ+  ++LY+ +++NP+ GC P+L+Q+P+ 
Sbjct: 4   KSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPIL 63

Query: 441 FAIYKVISISLEMRHAPFWGWIK 463
              Y+ IS + E++    + W++
Sbjct: 64  LGFYQAISRTAEIKTDS-FLWMQ 85


>gi|328479692|gb|EGF48851.1| preprotein translocase YidC [Lactobacillus rhamnosus MTCC 5462]
          Length = 208

 Score = 51.5 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 337 GWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389
            ++  I  P+  LM +    V    ++GIAI++ T+ V+L+  PL  +Q           
Sbjct: 30  TFYKIIGLPLQHLMEWIAGFVGSTSSYGIAIIVITLLVRLIVLPLMLRQQRTTTAYQEKQ 89

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKT------HNINPLAGCWPILLQIPVFFAI 443
           K +QP++  +++  K++     Q A     +        ++ P  GC P+L+Q P+F  +
Sbjct: 90  KILQPQLKIVQDAVKRAKTPEQQMAANNYMRKIYSANGTSMIPSMGCLPMLIQFPIFSGL 149

Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494
           Y+ I+ S E+ HA F+G    +     + I T+   LP+ +   + +   P
Sbjct: 150 YQAIAYSPEISHATFFG----IQLGHSSFIVTILATLPYIIVSLIMLQGVP 196


>gi|302521594|ref|ZP_07273936.1| membrane protein [Streptomyces sp. SPB78]
 gi|302430489|gb|EFL02305.1| membrane protein [Streptomyces sp. SPB78]
          Length = 200

 Score = 51.5 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 1/87 (1%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I++ T  V+LL  PL++           + P+I  LR K+ ++P   +Q+A+ +L+  H 
Sbjct: 41  IVVLTACVRLLLLPLSRTAARGQRERAGLAPEIAALRRKYAKNPE-RMQRALTELHAEHG 99

Query: 424 INPLAGCWPILLQIPVFFAIYKVISIS 450
           ++PL GC P+L Q+P FF +Y V S S
Sbjct: 100 VSPLGGCLPMLCQLPFFFVLYHVFSSS 126


>gi|145339114|ref|NP_190023.2| binding [Arabidopsis thaliana]
 gi|110742724|dbj|BAE99273.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644376|gb|AEE77897.1| membrane insertion protein and OxaA/YidC with tetratricopeptide
           repeat domain-containing protein [Arabidopsis thaliana]
          Length = 566

 Score = 51.5 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 93/253 (36%), Gaps = 34/253 (13%)

Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT-TVFVKLLFFPLAKK 381
               +   ++  D   + ++ +P+  L+  ++++ G     ++ T TV  +    P+   
Sbjct: 100 NGYGLEFGDLSQDLSNYDYLTQPVISLLDSYHDITGLPWWVVIATSTVAFRTALLPILIL 159

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
           Q   T  +    PK+      +            ++L++    +   GC P  L +P +F
Sbjct: 160 QRKQTKRISQFLPKLPHF---WPPQGSGRSVLDQLKLFRKERKD--IGC-PSFLWVPAYF 213

Query: 442 AIYKVISISLEMRHAPFWGWIKDL--AAADPTNIFTLFGILPFY----LPGFMHVGIWPI 495
           +I               + WI  +   + D    F   G L F     +P  ++  ++P 
Sbjct: 214 SIQISCF----------FLWITSIRRMSLDHHPGFDSGGALWFQNLTEIPNGLYGPLFPF 263

Query: 496 IMSLSMFIQMKMSPPPAD-----------KGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544
           +++   +   +++   +            K     LN +     F     P G ++YW+ 
Sbjct: 264 LIAGLHYTNTQITFTASSVHKVDKFTELAKAYKTFLNLLTCALYFLSFQMPQGSLLYWAT 323

Query: 545 SNVISIVQQAVIM 557
           +   SI QQ+++ 
Sbjct: 324 NLSFSIAQQSILN 336


>gi|146418711|ref|XP_001485321.1| hypothetical protein PGUG_03050 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 330

 Score = 51.5 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 32/169 (18%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------- 459
           +  +K    L+K H +          +QIP++  +      SL MR+   W         
Sbjct: 141 KETRKRQKALFKRHGVQIWKNFTLPAIQIPLWVGM------SLSMRNLSGWSTWDVLKNQ 194

Query: 460 -----------GWIKDLAAADPTNIFTL-FGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
                       W  DL  +DP ++F L  G++      +    I  +I+S     +  +
Sbjct: 195 ALDPSLYTEGALWFTDLTCSDPMHVFPLVLGVISLCNVEWTFKTIQLLIISRKRAFRSSL 254

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +   A+  +  +     V  +      P  L++YW  S + S++Q  ++
Sbjct: 255 TDAMANVSRMAV-----VFMMAISLHAPVSLVLYWFSSQLFSLIQNIIM 298


>gi|224103345|ref|XP_002313020.1| inner membrane protein [Populus trichocarpa]
 gi|222849428|gb|EEE86975.1| inner membrane protein [Populus trichocarpa]
          Length = 499

 Score = 51.5 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 74/246 (30%), Gaps = 35/246 (14%)

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
               M  L+  +++L G     I+ ++     L         +      +          
Sbjct: 93  PVDSMIWLLDSYHDLTGLPWWIIIASSTLAMRLTLFPLHVLQMHKIKKISRSFSKLPPLF 152

Query: 402 KFKQSPPQVLQKAMIQLYKTHNI---NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
               S    +++  +   +   I   + L     + +QIP F      I     + + P 
Sbjct: 153 PPPLSGRSYIEQISLFRNERRAIGCPSYLWFLAFLSVQIPCFLLWMTSIRRMC-LDNHPG 211

Query: 459 W-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           +      W ++L       +  +F   PF + G   V +         + +  ++     
Sbjct: 212 FDCGGALWFQNLTELPHGVLGPIF---PFLIAGLHGVNV--------HYYRKYLN----- 255

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
                    +P+ F       P G ++YW  ++ ++ +QQ  +          +  L   
Sbjct: 256 ------FMMLPLFF--IGYCIPQGSLVYWVTNSSLTAIQQVSL--KLPVVRAKLGLLDKD 305

Query: 574 FSKNYN 579
           F K   
Sbjct: 306 FPKAPA 311


>gi|150863808|ref|XP_001382409.2| COX18; cytochrome c oxidase assembly protein [Scheffersomyces
           stipitis CBS 6054]
 gi|149385064|gb|ABN64380.2| COX18; cytochrome c oxidase assembly protein [Scheffersomyces
           stipitis CBS 6054]
          Length = 305

 Score = 51.1 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 20/164 (12%)

Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI------------YKVISISL--EM 453
            +  +K    L+K +N+           Q+P++ ++            +  +      E 
Sbjct: 115 TKETRKRQKALFKKNNVQLWKNMILPAFQVPLWVSMSLTMRDLSGWTSWDSLPNKPLDEA 174

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
            ++    W  DL + D  ++F L   +               +  L+M  + ++ P   D
Sbjct: 175 LYSEGLFWFTDLTSFDQLHVFPLLVGITALCNVEWTFKTLE-LSRLTM--KKRLRPTLTD 231

Query: 514 KGQAMILNWMPVVFVF-ALSSFPAGLIIYWSWSNVISIVQQAVI 556
                 L+ M VVF+     + P+ L +YW  S + S+VQ  ++
Sbjct: 232 AISN--LSRMTVVFMMAISLNAPSALTLYWLSSQMYSLVQNVIL 273


>gi|315126468|ref|YP_004068471.1| hypothetical protein PSM_A1387 [Pseudoalteromonas sp. SM9913]
 gi|315014982|gb|ADT68320.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 216

 Score = 51.1 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 82/213 (38%), Gaps = 31/213 (14%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNI 392
            W  F A  + ++  +   +  +  +AI+L TV  +L+  P+          +   +  +
Sbjct: 3   IWNLFTAFIVQLITFFTQEVGVSQAVAIILFTVIGRLVLMPINLVAMVNMVRNKKAIAAL 62

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVISIS 450
           +P++D ++  +K  P   + K  + LYK HNI  +       +  Q       ++ +   
Sbjct: 63  KPELDSIKSNYKDQPS-EIAKLTMALYKKHNIKFIDKKSVINMASQGVFGLGTFQALQQI 121

Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510
           +       + WI  +A  D                         +++    ++ M M P 
Sbjct: 122 VL---NSKFAWITSIAKPD---------------------IAISLLVGAITYLSMMMMPG 157

Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
            A++   ++     ++ V  L +FP+ + +YW+
Sbjct: 158 SAEQTSTLLFLIPAIICVVTLVNFPSAIGLYWA 190


>gi|302869633|ref|YP_003838270.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora
           aurantiaca ATCC 27029]
 gi|302572492|gb|ADL48694.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora
           aurantiaca ATCC 27029]
          Length = 248

 Score = 51.1 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 16/210 (7%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L TV V+LL  PL   Q         + P++ EL+ ++   P   LQ  +  LY+   
Sbjct: 38  IVLFTVAVRLLISPLTVAQVRGERRRTALAPEVRELQRRYADDPA-RLQSELFALYRNAG 96

Query: 424 INPLAGCWPILLQIPVFFAIYKVIS---ISLEMRHA-----PFWGWIKD-LAAADPTNIF 474
            +P+AGC P LLQ P F  +Y++ +    + E+        P    + D LA   P    
Sbjct: 97  ASPVAGCLPALLQAPFFLVMYRLFATGDGAPELLGERLAGVPLGWHLGDGLAGPVPL--- 153

Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--PADKGQAMILNWMPVVFVFALS 532
            +FG+L   L          +  + +    +  +P   P       +L  +P   V    
Sbjct: 154 -VFGVLLAALLALAWWSSRRMRRAAAATGTVAGTPAEGPGAAVLGRVLPLLPYGTVLVAL 212

Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562
             P   ++Y   +   + ++Q V+ +   A
Sbjct: 213 VVPLAAVLYLVTTTAWTALEQVVLRRPQPA 242


>gi|218675211|ref|ZP_03524880.1| putative inner membrane protein translocase component YidC
          [Rhizobium etli GR56]
          Length = 42

 Score = 51.1 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/42 (50%), Positives = 27/42 (64%)

Query: 1  MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT 42
          ME N NYF+AIALSV+IV  WQ  Y+ PRIE     ++  + 
Sbjct: 1  MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKA 42


>gi|218134371|ref|ZP_03463175.1| hypothetical protein BACPEC_02265 [Bacteroides pectinophilus ATCC
           43243]
 gi|217989756|gb|EEC55767.1| hypothetical protein BACPEC_02265 [Bacteroides pectinophilus ATCC
           43243]
          Length = 162

 Score = 50.8 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 4/107 (3%)

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
           ++ +      + N G+AI++ T   KLL  PL  KQ   T     +QP++  +++K+K +
Sbjct: 25  WLFLGLDAIGIPNIGLAIIIFTFVTKLLMMPLTVKQMKFTKLSTVMQPELQAIQKKYKNT 84

Query: 407 PPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
             Q     +Q+    +Y  +  +P  GC  +L+Q P+  A+Y++I  
Sbjct: 85  KDQNEMLKMQEETKAVYAKYGTSPTGGCAQLLIQFPILLALYRIIQN 131


>gi|70953250|ref|XP_745738.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56526155|emb|CAH77908.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 352

 Score = 50.8 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 77/242 (31%), Gaps = 33/242 (13%)

Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394
            +   ++      +L S    L  ++ ++I+ TT F++L+  PL           + + P
Sbjct: 69  PYENSWYFNIVYELLNSTKILLDCSWLVSIIATTTFLRLIILPLTISAERDLIKQQILNP 128

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTH---------NINPLAGCWPILLQIPVFFAIYK 445
            I E   K K        K  ++              ++ P +    I ++ P+F   Y 
Sbjct: 129 VITEFTNKLKTHAQSGNIKTALEYKTKILNIRDTHGISLIPTSIILXIFMRTPLFVIFYF 188

Query: 446 V---ISISLEMRHAPFW---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499
               I+   E+     +    W+  L+  DP  I  +   L       +   I   I   
Sbjct: 189 SMKKIASYPEIFKEFTFESPLWLDSLSLPDPYCILPILSSLLLLSNHELTSLIDKHIA-- 246

Query: 500 SMFIQMKMSPPPADKG---QAMI-------LNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549
                   +P   D     Q  I       +    +       S P+GL IY+  +    
Sbjct: 247 ------NNNPNKYDDESEFQKNIKKISKIAMRAFYISSALFFKSMPSGLFIYFITNTFFQ 300

Query: 550 IV 551
           + 
Sbjct: 301 LF 302


>gi|225431027|ref|XP_002273357.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297735304|emb|CBI17666.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score = 50.4 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 88/237 (37%), Gaps = 41/237 (17%)

Query: 342 IAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400
             + +  L+  ++++    + I I  +T+ +++  FP+   Q      +  + PK+    
Sbjct: 103 PVRFLVSLLDGYHDVTGWPWWIIIASSTLALRIALFPILVLQLKKMKRIAELLPKLPPPL 162

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINP--LAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
                      Q ++ +  K     P  L     +  Q+P F  ++ +    + + H P 
Sbjct: 163 PPPLSGRSYFDQISLFRKEKRAIGCPSFLWFLASLSTQVPCFI-LWMMSIRWMSLDHHPG 221

Query: 459 W-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
           +      W ++L                   P  +   I+PI++S   FI +++S   + 
Sbjct: 222 FDSGGALWFQNLTEF----------------PNGVLGPIFPILISGLHFINVQISFSTSS 265

Query: 514 KGQ--------AMILNW------MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
            GQ        A    +      +P+ F       P G ++YW  ++ +S +QQ  I
Sbjct: 266 VGQVPGLLGLLAKYYKFYLEILTVPIFFTGFYI--PQGSLVYWVTNSSLSAIQQLTI 320


>gi|169838112|ref|ZP_02871300.1| hypothetical protein cdivTM_13613 [candidate division TM7
           single-cell isolate TM7a]
          Length = 44

 Score = 50.0 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           F     P+G+ +Y+  S  +S+VQQ  I+K  G      D ++S+
Sbjct: 1   FIFYKMPSGVTLYYLVSGALSLVQQYFILK--GRSDDGKDNIKSS 43


>gi|270003128|gb|EEZ99575.1| hypothetical protein TcasGA2_TC001561 [Tribolium castaneum]
          Length = 308

 Score = 50.0 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 75/259 (28%), Gaps = 70/259 (27%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGN--------FGIAIMLTTVFVKLLFFPLAKK 381
           F+ +       F +      + Y    + N        +   I+ TTV ++         
Sbjct: 48  FDSIAKTQSGIFKSLSESAPVEYCQKFLLNVHDTTGLPWWATIICTTVMMRGCVTVPLAI 107

Query: 382 QYVSTA------------------NMKNIQPKIDELREKFKQSPPQVLQKAMIQ-LYKTH 422
                                       I  K+    EK  +   +   +   Q L +  
Sbjct: 108 YQNYIMAKLEFVKLEMDEIAQELKKETAIAVKMYNWDEKTARITFKRSIRKQWQGLIQRE 167

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL--FGIL 480
           N +P      I  QIP++ ++      S+ +R+  +    +D +A       ++  FG +
Sbjct: 168 NCHPFKTTLLIFFQIPLWISL------SVSLRNLVYMLPQQDTSAQITFTELSVGGFGWI 221

Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA--GL 538
           P  L       + PI+  L                                 +      +
Sbjct: 222 P-NLTVVDSSLVLPILFGL--------------------------------LNLAIIECV 248

Query: 539 IIYWSWSNVISIVQQAVIM 557
           ++YW+ S+    VQ  V++
Sbjct: 249 VLYWTTSSAFGFVQNLVLI 267


>gi|237749664|ref|ZP_04580144.1| predicted protein [Helicobacter bilis ATCC 43879]
 gi|229374741|gb|EEO25132.1| predicted protein [Helicobacter bilis ATCC 43879]
          Length = 147

 Score = 50.0 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 64/141 (45%), Gaps = 5/141 (3%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           + + + + + + +       +    N+G++I+L ++ V L    +            +++
Sbjct: 6   LYYIFIFPLEQVLDWAFFTLFKASKNYGVSIILLSLVVNLFLLKIFLYTDKKAQQEADLK 65

Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
                +I   +  +K++      +A+ + +K H I  L     + LQIP FFA+Y++I+ 
Sbjct: 66  EKLDKRIKSWKSVYKRAKLYAFTQALYRQHKYHPIYALRSLGGLALQIPFFFAMYEIINK 125

Query: 450 SLEMRHAPFWGWIKDLAAADP 470
           + E   +  + WI DL+  D 
Sbjct: 126 A-EYLQSVRFLWIDDLSKPDS 145


>gi|297818908|ref|XP_002877337.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297323175|gb|EFH53596.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 540

 Score = 49.6 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 86/240 (35%), Gaps = 34/240 (14%)

Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT-TVFVKLLFFPLAKKQYVSTANMKNIQP 394
              + ++ +P+  L+  +++L G     ++ T TV  +    P+   Q   T  +    P
Sbjct: 86  VSNYDYLTQPVISLLDSYHDLTGLPWWVVIATSTVAFRTALLPILILQRKQTRRISQFLP 145

Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454
           K+      +            ++L++    +   GC P  L +P +F+I           
Sbjct: 146 KLPPF---WPPEGSGRSVIDQLKLFRKERRDS--GC-PSFLWVPAYFSIQISCF------ 193

Query: 455 HAPFWGWIKDL--AAADPTNIFTLFGILPFY----LPGFMHVGIWPIIMSLSMFIQMKMS 508
               + WI  +   + D    F   G L F     +P  ++  ++P +++   +   +++
Sbjct: 194 ----FLWITSIRRMSLDHHPGFDSGGALWFQNLTEVPNGLYGPLFPFLIAGLHYTNTQIT 249

Query: 509 PPPAD-------KGQAMILNWMPVVFVF----ALSSFPAGLIIYWSWSNVISIVQQAVIM 557
              +           A           F         P G ++YW+ +   SI QQ+++ 
Sbjct: 250 FTASSVHKVDKFAELAKTFKMFLNFLTFALYGLSFQMPQGSLLYWATNLSFSIAQQSILN 309


>gi|85110762|ref|XP_963619.1| hypothetical protein NCU06778 [Neurospora crassa OR74A]
 gi|18376012|emb|CAB91746.2| conserved hypothetical protein [Neurospora crassa]
 gi|28925305|gb|EAA34383.1| predicted protein [Neurospora crassa OR74A]
          Length = 441

 Score = 49.6 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 55/173 (31%), Gaps = 58/173 (33%)

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           +NPLA   P  L           +  ++E        W  DL AADP +           
Sbjct: 256 VNPLANILPESLSS----YFQNTLPTTME-----GCLWFPDLMAADPLH----------- 295

Query: 484 LPGFMHVGIWPIIMSLSMFIQMK----------MSPPPAD-------------KGQ---- 516
                   I P ++S +MF+ +           ++P   D             K Q    
Sbjct: 296 --------ILPFVLSFTMFVNVMPRNQEGWLRLLNPGTEDVNPNNIGEHASKIKQQKSVG 347

Query: 517 ---AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
                 L  + ++   A  + PA L +YW  +++ S    +V+         L
Sbjct: 348 LRMQRALLLLTLIVGPATINLPAALHLYWITTSLTSNAITSVVAAKMPLPPYL 400


>gi|242766718|ref|XP_002341226.1| mitochondrial export translocase Oxa2, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218724422|gb|EED23839.1| mitochondrial export translocase Oxa2, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 318

 Score = 49.6 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 80/242 (33%), Gaps = 32/242 (13%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           + W     +A     ++  F  LV +      +  +   LL      +Q V    M+N  
Sbjct: 57  LPWAASIPLAAVCVRMVVAFPLLVWSRVTNRKMADIAPLLLCLRNHYQQAVKAQAMENKL 116

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
                  E+  ++  +        LYK   I+   G    LLQ+PV+ A+ + +    + 
Sbjct: 117 YMRPREAERQLRAHLKERTA---LLYKEWGISRTLGFL-PLLQLPVWLALMEGVRNIGQS 172

Query: 454 RHAPFW---------GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
            + P            W  DL A D T I  L   L       +           +    
Sbjct: 173 MNLPGVEPALANGGAFWFPDLLAGDTTGILPLALTLSIMANVRL---------GFTTKTF 223

Query: 505 MKMSPPPADKGQAMILN-----WMPVVFVFALSS-----FPAGLIIYWSWSNVISIVQQA 554
            ++S     +    +       ++  + V+   +      PAG+++YW  S   + +Q  
Sbjct: 224 AELSDYKTPEMTRHLFLKVVKEFLTFMSVYIGFTAYMTGMPAGMMLYWIASTNTATLQSK 283

Query: 555 VI 556
            +
Sbjct: 284 FL 285


>gi|254467613|ref|ZP_05081022.1| 60Kd inner membrane protein [Rhodobacterales bacterium Y4I]
 gi|206684361|gb|EDZ44845.1| 60Kd inner membrane protein [Rhodobacterales bacterium Y4I]
          Length = 1344

 Score = 49.2 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 76/202 (37%), Gaps = 22/202 (10%)

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           +  + ++  ++  ++L  P+A K             ++  L+ K    P +  + A+   
Sbjct: 409 HILLGLLALSIVTRILVLPVALKSERDQIITNETADEMKALKAKLAHDPVRKAR-AVQAF 467

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           Y    + P+      LL +PV          +      P + W++DL A DP  I  +  
Sbjct: 468 YAEKGLTPMKN-LTALLFLPVMMLGVSAAQEASASLQTP-FLWMEDLGAPDPLFILPVL- 524

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538
                   F  +    ++ +++   + K+           ++  MP +F   + S  A  
Sbjct: 525 --------FCALAAVYLLWAVAKTKRQKLL---------WMVLGMPALFA-MVFSLTAAA 566

Query: 539 IIYWSWSNVISIVQQAVIMKMH 560
             Y  +S  + +VQ+A +  MH
Sbjct: 567 NAYLCFSLTLLLVQRAYVTGMH 588


>gi|190346783|gb|EDK38952.2| hypothetical protein PGUG_03050 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 330

 Score = 49.2 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 32/169 (18%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------- 459
           +  +K    L+K H +          +QIP++  +      SL MR+   W         
Sbjct: 141 KETRKRQKALFKRHGVQIWKNFTLPAIQIPLWVGM------SLSMRNLSGWSTWDVLKNQ 194

Query: 460 -----------GWIKDLAAADPTNIFTL-FGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
                       W  DL  +DP ++F L  G++      +    I   I+S     +  +
Sbjct: 195 ALDPSLYTEGALWFTDLTCSDPMHVFPLVLGVISLCNVEWTFKTIQLSIISRKRAFRSSL 254

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +   A+  +  +     V  +      P  L++YW  S + S++Q  ++
Sbjct: 255 TDAMANVSRMAV-----VFMMAISLHAPVSLVLYWFSSQLFSLIQNIIM 298


>gi|242094868|ref|XP_002437924.1| hypothetical protein SORBIDRAFT_10g004860 [Sorghum bicolor]
 gi|241916147|gb|EER89291.1| hypothetical protein SORBIDRAFT_10g004860 [Sorghum bicolor]
          Length = 593

 Score = 48.8 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 68/240 (28%), Gaps = 47/240 (19%)

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
               +  LM  F++L G      +  +     L    A            I      L  
Sbjct: 136 AVSTILDLMDGFHSLTGLPWWMTISFSTVAMRLLILPALIVQ--LQKTAKIGEVFRRLST 193

Query: 402 KFKQSPPQVLQKAMIQLYKTHNI-----NPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456
                 P    +    L++         + L       +Q P F  ++ +   S+ + + 
Sbjct: 194 SLPTPQPGNNFREEYALFQKKKKELGCPSFLWNFAYFSVQFPCFI-LWMMSIRSMCLNNH 252

Query: 457 PFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511
           P +      W  +L       +   F                PI+++   ++ +++S   
Sbjct: 253 PGFDNGGILWFHNLTEFPHGTLGPTF----------------PILVAGLHYLNVQISFQG 296

Query: 512 ADKGQAM----ILN-----------WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
               Q      I              + +         P G ++YW+ + + S+ QQ  +
Sbjct: 297 ---SQIKDHPGIFGLLAKYYRIYLDVLTIPLFLIAYVVPQGSLVYWTTNGLFSVAQQLFL 353


>gi|254477913|ref|ZP_05091298.1| 60Kd inner membrane protein [Ruegeria sp. R11]
 gi|214028498|gb|EEB69334.1| 60Kd inner membrane protein [Ruegeria sp. R11]
          Length = 1320

 Score = 48.8 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 3/120 (2%)

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           +    ++  ++  ++L  P+A K             ++ EL+E+    P +  + A+   
Sbjct: 384 HILWGLLALSLITRILILPVALKSERDQIITGETADEMKELKERLAHDPVRKAR-AVQAF 442

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           Y    + P+      LL +PV          +      P + W+ DL   DP  I     
Sbjct: 443 YAEKGLTPMKN-LTALLFLPVMMLGVSAAQEASASLQTP-FLWMADLGLPDPLFIMPALF 500


>gi|225680414|gb|EEH18698.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 360

 Score = 48.8 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 46/149 (30%), Gaps = 26/149 (17%)

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           G   IL Q     A    + + L +     + W+ DL A+DP  +         +     
Sbjct: 197 GLLVILQQWISPDAAKAQVPVELSLSTEGAF-WLPDLTASDPLYVLPFAISALMFTHITW 255

Query: 489 HVGI-----WPIIM------SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF--P 535
              I      P++        +  +   +                M +    AL     P
Sbjct: 256 GSKICKAKELPMLASQGNLQGIFSWAIQR------------TFQVMSIWIAPALMHSEAP 303

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           A L IYW  +  ++I+Q  ++ K      
Sbjct: 304 AALGIYWLTTTSVAIIQSRLLKKFMPPPT 332


>gi|226287813|gb|EEH43326.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 360

 Score = 48.4 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 46/149 (30%), Gaps = 26/149 (17%)

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           G   IL Q     A    + + L +     + W+ DL A+DP  +         +     
Sbjct: 197 GLLVILQQWICPDAAKAQVPVELSLSTEGAF-WLPDLTASDPLYVLPFAISALMFTHITW 255

Query: 489 HVGI-----WPIIM------SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF--P 535
              I      P++        +  +   +                M +    AL     P
Sbjct: 256 GSKICKAKELPMLASQGNLQGIFSWAIQR------------TFQVMSIWIAPALMHSEAP 303

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           A L IYW  +  ++I+Q  ++ K      
Sbjct: 304 AALGIYWLTTTSVAIIQSRLLKKFMPPPT 332


>gi|72160589|ref|YP_288246.1| preprotein translocase YidC subunit [Thermobifida fusca YX]
 gi|71914321|gb|AAZ54223.1| preprotein translocase YidC subunit [Thermobifida fusca YX]
          Length = 241

 Score = 48.4 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 66/202 (32%), Gaps = 12/202 (5%)

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           +    I   T+  ++L  PL+  Q         + P++  LRE++    P+ L     +L
Sbjct: 31  SAAATIAFLTLAARVLTLPLSYLQVRGEKIRARLAPQLYALRERY-GHNPERLVAKTREL 89

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH-APFWGWIKDLAAADPTNIFTLF 477
           Y     +P AGC P L Q P+F  +   +    E+   A     +        + +  + 
Sbjct: 90  YAREGASPFAGCLPALAQAPMF-TLLYTLFTVPEIDGSANALLALPFAGTPLGSTLPRIL 148

Query: 478 GILPFYLPGFMHVGIWPIIMSLSM---FIQMKMSPP-----PADKGQAMILNWMPVVFVF 529
                         +  +         ++ +                A +  ++P + V 
Sbjct: 149 ASGDLGALPVFAALLAALAAVAWANRRWLTLPALSAAPAAGQPTPVPAFV-TYLPFLTVV 207

Query: 530 ALSSFPAGLIIYWSWSNVISIV 551
             +  P    IY   S   ++V
Sbjct: 208 IAAFVPLASGIYLVTSTTWTVV 229


>gi|326491389|dbj|BAK05781.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 597

 Score = 48.4 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 64/236 (27%), Gaps = 41/236 (17%)

Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA--KKQYVSTANMKNIQPKIDE 398
           F    +  ++  F+NL G      +  +     L        +   +    +  Q     
Sbjct: 130 FAMDSLVGVLDGFHNLTGLPWWLTISASTVAMRLIILPTLIVQLQKTAKIGQLFQKLPPP 189

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNI-NPLAGCWPILLQIPVFFAIYKVISISLEMRH-- 455
           L         +       +  +     + L       +Q P F      I       H  
Sbjct: 190 LPPPLSGRSYRDQYSLFRKKRQELGCPSFLWNFAYFAVQFPCFILWMASIRSMCLSNHPG 249

Query: 456 --APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
                  W  +L                   P      ++PI+++   ++ +++S     
Sbjct: 250 LDNGGILWFNNLTEF----------------PHGALGPVFPILVAGLHYLNVQIS---FQ 290

Query: 514 KGQAM---------------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           K QA                 L+ M +         P G ++YW+ + +  + QQ 
Sbjct: 291 KSQAKHYPGVLGLLAKYYRIYLDIMAIPLFLIAYVVPQGSLVYWTTNGLFHVAQQL 346


>gi|149238229|ref|XP_001524991.1| hypothetical protein LELG_04023 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146451588|gb|EDK45844.1| hypothetical protein LELG_04023 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 341

 Score = 48.4 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 55/186 (29%), Gaps = 22/186 (11%)

Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446
                  P  +   E+      + ++K    L+K H +           QIP++  +   
Sbjct: 148 HTRAAQAPLANMTYEQILLLSTKEVRKRQKVLFKKHGVQIWKNFLLPACQIPLWIIMSLT 207

Query: 447 IS-----ISLEMRH---------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492
           +       S +  H              W +DL  AD  +IF +   +            
Sbjct: 208 MRDLSGWSSWDNIHNKALDPSLYTEGCLWFQDLTIADLAHIFPVILGIISLCNIEWTFKT 267

Query: 493 WPIIMSLSMFIQMKMS--PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
             +       +  K+   P   D   A       V  +      PA L +YW  S   S+
Sbjct: 268 LEL-----SRLTQKLKYRPTLTDAV-ANFSRLSIVFMMAISIHAPAALTLYWISSQFFSL 321

Query: 551 VQQAVI 556
           +Q   +
Sbjct: 322 IQNIWL 327


>gi|269125945|ref|YP_003299315.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata
           DSM 43183]
 gi|268310903|gb|ACY97277.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata
           DSM 43183]
          Length = 235

 Score = 48.1 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 1/122 (0%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I++ T+ V+L   PL+ +          + P+I  LR ++    P  LQ+ +  L++   
Sbjct: 35  IVVFTMAVRLSLLPLSIRAARGARARARLAPQIAGLRRRYA-HDPVRLQRELAALHRAEG 93

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           ++P AGC P L Q P FF +Y++ + ++             L A    N   +    PF 
Sbjct: 94  VSPAAGCLPSLAQAPFFFLMYRLFTAAVVGGRENLLLAQSLLGAPLGQNFAGVVVSAPFS 153

Query: 484 LP 485
            P
Sbjct: 154 GP 155


>gi|255613972|ref|XP_002539553.1| conserved hypothetical protein [Ricinus communis]
 gi|223505007|gb|EEF22830.1| conserved hypothetical protein [Ricinus communis]
          Length = 88

 Score = 47.7 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 2/88 (2%)

Query: 229 LVEQKYSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQ 286
           L + KY   +K        S   W GI+DKYW +  IP++    ++Q+      G   Y+
Sbjct: 1   LEQSKYQKWKKDKPQQTITSVGGWTGITDKYWLTALIPTQNERINAQYNVTPVAGVDVYE 60

Query: 287 AKFSANEITILPGKSITTTNFLFAGAKE 314
           A F+A   T+ PG+++T T  LFAGAK 
Sbjct: 61  ANFAAVAKTVNPGQTVTETTRLFAGAKT 88


>gi|149033747|gb|EDL88543.1| similar to hypothetical protein FLJ38991 (predicted), isoform CRA_a
           [Rattus norvegicus]
          Length = 155

 Score = 47.7 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 19/104 (18%)

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           A    W  DL A D T I                V +  +     +F   K+      + 
Sbjct: 30  AGGTLWFPDLTAVDSTWIL---------PVSVGVVNLLIV----EIFALQKI---GKSRF 73

Query: 516 QAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           Q  + N++    V+ V   ++ P+ L++YW  S+++ + Q  ++
Sbjct: 74  QMYVTNFVRAVSVLMVPVAATVPSALVLYWLCSSLMGLSQNLLL 117


>gi|254518208|ref|ZP_05130264.1| inner membrane insertion protein [Clostridium sp. 7_2_43FAA]
 gi|226911957|gb|EEH97158.1| inner membrane insertion protein [Clostridium sp. 7_2_43FAA]
          Length = 212

 Score = 47.7 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 82/213 (38%), Gaps = 16/213 (7%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
              I      ++ + + + G++GIAI+L T+ VKLL  P + KQ ++         +I+ 
Sbjct: 1   MDIIINIFKTMIEFAFQITGDWGIAIVLLTITVKLLMLPFSIKQRIAMKKQIVFSKEIEA 60

Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +++K+K +  +   +             + GC+  LLQ+P+   +Y  IS          
Sbjct: 61  VKKKYKNNKKRQDDELNKLYLNNSKG--MFGCFLSLLQLPIISGLYMSISRLPVEAMIML 118

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
             W  ++ + D   I  L   +   LP  +                 K+           
Sbjct: 119 IPWAMNIGSTDDKFIVPLIYTIVSILPSIISYL--------------KIFNSNEKPISIK 164

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551
            +  M +  +      P GL IY+  S++ +++
Sbjct: 165 SIIPMLIFGLVITVKAPIGLGIYFITSSIFTLL 197


>gi|207111464|ref|ZP_03245626.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori HPKX_438_CA4C1]
          Length = 48

 Score = 47.3 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFV 528
           P ++ + I P++M  SM+    ++P    D  QA I   +P++F 
Sbjct: 4   PSWIRIFILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFT 48


>gi|325088874|gb|EGC42184.1| mitochondrial export translocase Oxa2 [Ajellomyces capsulatus H88]
          Length = 366

 Score = 46.9 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 46/148 (31%), Gaps = 26/148 (17%)

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           G   IL Q      +   I +   +       W  DL AADP ++  +   +  +     
Sbjct: 197 GLLAILQQWFNPDGVKAQIPVEPSLSSQGA-LWFPDLMAADPLSVLPVAISVLMFTHITW 255

Query: 489 HVGI-----WPIIM------SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF--P 535
              +      P ++       +  +   +            I   M +     L     P
Sbjct: 256 GSKVSKMKDLPKLVSQGNLQGIFSWAIQR------------IFQAMSIWIAPTLLYSEAP 303

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           A L IYW  +  ++IVQ  ++ K     
Sbjct: 304 AALSIYWLSTTCVAIVQSRLLKKYMPTP 331


>gi|163742420|ref|ZP_02149807.1| phosphoenolpyruvate synthetase-related protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161384370|gb|EDQ08752.1| phosphoenolpyruvate synthetase-related protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 1341

 Score = 46.9 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 69/194 (35%), Gaps = 26/194 (13%)

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429
             +++  P+A K         +   ++  L+E+    P +  + A+   Y    + P+  
Sbjct: 416 ITRIMILPVALKSERDQIITNDTADEMKALKERLADDPVRKAR-AVQAFYADKGLTPMKN 474

Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489
               LL +PV          +      P + W+ DL AADP  I  +          F  
Sbjct: 475 -LTALLFLPVMMLGVSAAQEASASLQTP-FLWMADLGAADPLFILPVL---------FCA 523

Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
           +    ++ ++                Q    ++  MP +F   + +  A    Y  +S  
Sbjct: 524 LAAVYLLWAV-----------AKTPRQKTLWMVLGMPALFA-MVFTLTAAANAYLCFSLT 571

Query: 548 ISIVQQAVIMKMHG 561
           + +VQ+A +  MH 
Sbjct: 572 LLLVQRAYVTGMHK 585


>gi|225560586|gb|EEH08867.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 366

 Score = 46.9 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 56/178 (31%), Gaps = 45/178 (25%)

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           G   IL Q      +   I +   +       W  DL AADP                  
Sbjct: 197 GLLAILQQWFNPDGVKAQIPVEPSLSSQGA-LWFPDLMAADP------------------ 237

Query: 489 HVGIWPIIMSLSMFIQ-------MKMSPPPADKGQ-----------AMILNWMPVVFVFA 530
            +GI P+ +S+ MF          KM   P    Q             I   M +    A
Sbjct: 238 -LGILPVAISVLMFTHITWGSKVSKMKDLPKLVSQGNLQGIFSWAIQRIFQAMSIWIAPA 296

Query: 531 LSSF--PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST-----FSKNYNSQ 581
           L     PA L IYW  +  ++IVQ  ++ K           ++ T     + +   +Q
Sbjct: 297 LLYSEAPAALSIYWLSTTCVAIVQSRLLKKYMPTPNVPKACVKRTIVRYVYERKPGTQ 354


>gi|301101800|ref|XP_002899988.1| Cytochrome Oxidase Biogenesis (Oxa1) Family [Phytophthora infestans
           T30-4]
 gi|262102563|gb|EEY60615.1| Cytochrome Oxidase Biogenesis (Oxa1) Family [Phytophthora infestans
           T30-4]
          Length = 360

 Score = 46.9 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/326 (11%), Positives = 89/326 (27%), Gaps = 44/326 (13%)

Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL-FAGAKEFPTIHHYEK 323
           P         F+ +      + A +S +       +S   T  L     +          
Sbjct: 22  PISGGQKLLHFRTVQAAVPVFAAPYSLDNRRFSTSESAPPTLELTMTDGQLTDVAAAVTS 81

Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383
                 + ++               L  +   L+    +  ++      +L     ++  
Sbjct: 82  GTGNEPWAIVQGVQSVLETVHTTTGLPWWATLLLSGVTVRAVIFPF--YVLQIQAMQRLI 139

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVL-------QKAMIQLYKTHNINPLAGCWPILLQ 436
            +  +   +       R     S  +         ++ +  + K +N  P+      +  
Sbjct: 140 QARPDFSKLHSAYKYARTFTPGSDHKGHLDAILLGRQGLKAVMKKYNTRPIQTIMGSVAY 199

Query: 437 IPVFFAIYKVISISLEMRH-----APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV- 490
           IP+F  +       +   +     +    + K+L   D T +  +      Y    + V 
Sbjct: 200 IPIFVLMAYSARDMVRSGNFAGFDSGGLLFWKNLMETDSTYVLPILAATSTYGNLELSVR 259

Query: 491 ---GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
              G W  ++    +I                     +  V  L + P G+  YW  ++ 
Sbjct: 260 NKSGFWTTLLQGGQYIT--------------------IFAVPVLVNLPQGVFFYWLGASC 299

Query: 548 ISIVQQAVIM-----KMHGAEIGLID 568
            S+ Q   +      +  G +  + +
Sbjct: 300 SSMAQTIAMNNNNFRRRIGLKPRITE 325


>gi|322709833|gb|EFZ01408.1| mitochondrial export translocase Oxa2 [Metarhizium anisopliae ARSEF
           23]
          Length = 348

 Score = 46.9 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 15/95 (15%)

Query: 459 WGWIKDLAAADPTNIFT-----LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
             W  DL A DP  +       L     +       +G+   +         +    P  
Sbjct: 211 CLWFADLTAMDPYYVLPMLCSALLARTSWGRLSKDQLGVLLSLDG------SRAPKTPMA 264

Query: 514 KGQAMI---LNWMPVVFVFALSSFPAGLIIYWSWS 545
           + Q  I   L  +P+ F    +  P+ + +YW+ +
Sbjct: 265 RIQTGIGRALLLIPL-FPMLFADLPSAIFLYWATT 298


>gi|213423218|ref|ZP_03356225.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E01-6750]
          Length = 37

 Score = 46.9 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 494 PIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529
           PI+M ++MF   KMSP    D  Q  I+ +MPV+F  
Sbjct: 1   PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTV 37


>gi|42562960|ref|NP_176688.3| OXA1 family protein [Arabidopsis thaliana]
 gi|38372237|sp|Q8L718|ALB32_ARATH RecName: Full=ALBINO3-like protein 2, chloroplastic; Short=Ath5;
           Flags: Precursor
 gi|6227006|gb|AAF06042.1|AC009360_7 F16G16.8 [Arabidopsis thaliana]
 gi|332196206|gb|AEE34327.1| ALBINO3-like protein 2 [Arabidopsis thaliana]
          Length = 525

 Score = 46.9 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 72/243 (29%), Gaps = 39/243 (16%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           +I           +   +  F+   G     I+ ++     L         +      + 
Sbjct: 70  IIPTDDSSLPVLAVVDFLEGFHEFTGLPWWMIIASSTVAVRLALLPLLILQLKKLKTISE 129

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL----LQIPVFFAIYKVIS 448
                 +    +    +          K                  +Q+P FF +   I 
Sbjct: 130 LLPKLPMPI-PETPTLKGSIDQFSHFLKESRAIGCPSFLWFFPYLSVQLPCFFLLMASIR 188

Query: 449 ISLEMRHAPFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503
               +   P +      W ++L+                 LPG     ++PI+++   +I
Sbjct: 189 KM-SLDGHPGFDSGGVLWFQNLS----------------DLPGGSFGPVFPILIATFHYI 231

Query: 504 QMKMSPPPADKGQAM-----ILNW-------MPVVFVFALSSFPAGLIIYWSWSNVISIV 551
            +++S   +   Q       ++ +       + V   F   + P G ++YW  ++ ++I 
Sbjct: 232 NIQISFDTSTIRQTTGLTGLLMRYYKLYLEILSVPLFFVGYAIPQGSLVYWVTNSSVNIF 291

Query: 552 QQA 554
           QQ 
Sbjct: 292 QQL 294


>gi|295132778|ref|YP_003583454.1| beta-galactosidase [Zunongwangia profunda SM-A87]
 gi|294980793|gb|ADF51258.1| beta-galactosidase [Zunongwangia profunda SM-A87]
          Length = 1055

 Score = 46.5 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/204 (10%), Positives = 54/204 (26%), Gaps = 1/204 (0%)

Query: 52  SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111
             A +    +        +++     + G  N K   F+  +L+ +     S  P     
Sbjct: 755 DAADIATAGQLNVSKKGDQLQFSTEKIEGVFNTKTGSFESYHLKDHQQSPISVFPEPY-F 813

Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
             + T N +   +     A      N+      ++ K                 + +   
Sbjct: 814 WRAPTDNDFGNGMPQKLKAWKEATHNATVTHVEVAKKAKEGQQITVTYQLGGVAVPYTVA 873

Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231
             ++ +   K+  T+ ++           R++          +G          + S   
Sbjct: 874 YFIENNGDIKVTATLDSDKDLPELPRFGMRMVLPGDYDNLEYYGRGPWENYSDRNTSAFM 933

Query: 232 QKYSDIEKSSISNFHESNSWLGIS 255
             Y D  ++  +  +      G  
Sbjct: 934 GVYKDQVENQFTWEYIRPQEAGYK 957


>gi|297837823|ref|XP_002886793.1| hypothetical protein ARALYDRAFT_475515 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332634|gb|EFH63052.1| hypothetical protein ARALYDRAFT_475515 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 524

 Score = 46.5 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 79/255 (30%), Gaps = 44/255 (17%)

Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396
                    +   +  F+   G     I+ ++     L         +      +     
Sbjct: 73  DDSSLPVLFVVDFLDGFHEFTGLPWWMIIASSTVAVRLALLPLLILQLKKLKTISELLPQ 132

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL----LQIPVFFAIYKVISISLE 452
             +    +    +          K                  +Q+P FF +   I     
Sbjct: 133 LPMPI-PETPTLKGSIDQFSHFLKESRAIGCPSFLWFFPYLSVQLPCFFLLMASIRKM-S 190

Query: 453 MRHAPFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507
           +   P +      W ++L+                 LP      ++PI+++   +I +++
Sbjct: 191 LDGHPGFDSGGALWFQNLS----------------DLPVGSFGPVFPILIAAFHYINIQI 234

Query: 508 SPPPADKGQAM-----ILNW---------MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
           S   +   Q       ++ +         +P+ FV    + P G ++YW  ++ ++I QQ
Sbjct: 235 SFDTSTIRQTTGLTGLLMRYYKLYLEILGVPLFFV--GYAIPQGSLVYWVTNSSVNIFQQ 292

Query: 554 AVIMK-MHGAEIGLI 567
             +     GA++GL+
Sbjct: 293 LSLKHPRVGAKLGLL 307


>gi|312073694|ref|XP_003139635.1| 60Kd inner membrane protein [Loa loa]
 gi|307765200|gb|EFO24434.1| 60Kd inner membrane protein [Loa loa]
          Length = 399

 Score = 46.5 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 87/300 (29%), Gaps = 32/300 (10%)

Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA--GAKEFPTIHHYEKDL 325
              + S  K +               IT +P ++++   F F      +   +     + 
Sbjct: 42  GVRYASTAKDIFVPSQDSLTGIPDIPITNMPPEAVSGPGFSFYEKWLLKVDVLDMLGLN- 100

Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385
            I   E    + W+   +     L     +    +  +I+  T+ ++L F          
Sbjct: 101 DISTVERTGLFTWYSPASWYRIGLEFIHNHFDLPWFASIICITLCLRLAFLRATLFLQRF 160

Query: 386 TANMKNIQPKIDELREKFKQSP--------PQVLQKAMIQLYKTHNINPLAGCWPILLQI 437
                     +    EK K++          + +         T+N+      +  +L  
Sbjct: 161 APKKMIHDETLKMFDEKKKEAQEVVRCEALYRKISHDENVYIDTYNLRSSNRYYYFVLNS 220

Query: 438 PVFFAIYKVISISLEMRHAPF----WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493
            +F + Y+ I +  E     +      W  DL   DP  +                    
Sbjct: 221 VLFISQYRGIILMAENNFPGWDTGGALWFLDLTMTDPNFLVPALSS-------------- 266

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS--FPAGLIIYWSWSNVISIV 551
            +++  ++F+    +   +         +  V       S   P  + IYW  SN  +++
Sbjct: 267 -VLIGCTLFLGYDPTGTASASKYVKAFKYFVVPVGVFFFSSRVPVAISIYWCTSNFFNLL 325


>gi|163739228|ref|ZP_02146640.1| PEP-utilising enzyme, mobile region [Phaeobacter gallaeciensis
           BS107]
 gi|161387628|gb|EDQ11985.1| PEP-utilising enzyme, mobile region [Phaeobacter gallaeciensis
           BS107]
          Length = 1341

 Score = 46.5 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 69/197 (35%), Gaps = 29/197 (14%)

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429
             +++  P+A K         +   ++  L+E+    P +  + A+   Y    + P+  
Sbjct: 416 ITRIMILPVALKSERDQITTNDTADEMKALKERLADDPVRKAR-AVQAFYADKGLTPMRN 474

Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489
               LL +PV          +      P + W+ DL AADP  I  +          F  
Sbjct: 475 -LTALLFLPVMMLGVSAAQEASASLQTP-FLWMADLGAADPLFILPVL---------FCA 523

Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNV 547
           +    ++ ++                Q    ++  MP +F   + +  A    Y  +S  
Sbjct: 524 LAAVYLLWAV-----------AKTPRQKTLWMVLGMPALFA-MVFTLTAAANAYLCFSLT 571

Query: 548 ISIVQQAVIM---KMHG 561
           + +VQ+A +    +  G
Sbjct: 572 LLLVQRAYVTGLHRKLG 588


>gi|148271706|ref|YP_001221267.1| hypothetical protein CMM_0527 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829636|emb|CAN00552.1| putative membrane protein [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 255

 Score = 46.5 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 74/184 (40%), Gaps = 16/184 (8%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
            G+A++L T+ V+ L  P+   Q  +    + I P + ELR +    P Q L +A  +LY
Sbjct: 36  TGVAVILLTLGVRALLVPVGVAQVRAEIQRRRIAPALAELRRRHAGKPEQ-LSRATQELY 94

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVIS------ISLEMRHAPFWGWIKDLAAADPTNI 473
                +PLAGC P L Q PV  A+Y + +       +  +  AP +  I   ++A     
Sbjct: 95  AREGASPLAGCLPTLAQAPVLAAVYALFAHARIGGEANALLAAP-FAGIPLGSSALSAAA 153

Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG------QAMILNWMPVVF 527
             +  ++   +   +   +  +     +  Q    P P D           ++  +P V 
Sbjct: 154 MGVTPLVVSVVVLGLLAIVIEVRRRADLRFQG--PPAPVDPALPGMAGMTAMMRVLPFVT 211

Query: 528 VFAL 531
           V   
Sbjct: 212 VVFA 215


>gi|134109449|ref|XP_776839.1| hypothetical protein CNBC3300 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259519|gb|EAL22192.1| hypothetical protein CNBC3300 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 459

 Score = 46.5 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           A IL +  + F    S  P+G+++YW  S   S +Q   + 
Sbjct: 401 ANILRFSAIGFAMIASQMPSGVVLYWFTSLCYSFIQNFFLT 441


>gi|58264942|ref|XP_569627.1| cytochrome c oxidase biogenesis-related protein [Cryptococcus
           neoformans var. neoformans JEC21]
 gi|57225859|gb|AAW42320.1| cytochrome c oxidase biogenesis-related protein, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 461

 Score = 46.1 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
           A IL +  + F    S  P+G+++YW  S   S +Q   + 
Sbjct: 403 ANILRFSAIGFAMIASQMPSGVVLYWFTSLCYSFIQNFFLT 443


>gi|255935419|ref|XP_002558736.1| Pc13g02980 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583356|emb|CAP91367.1| Pc13g02980 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 345

 Score = 46.1 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 73/250 (29%), Gaps = 55/250 (22%)

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432
           +L   + +        +     +     E  +      L+K    L+K   ++       
Sbjct: 96  ILSAWMKRYAQKQMDQVPTANLRNYNNTEVKRNI-LTELRKRTAVLHKRWGVSSKYKAIG 154

Query: 433 ILLQIPVFFAIYKVISIS--------------LEMRHAPFW------------------G 460
             LQIPVF A+ + +                 +E    P                     
Sbjct: 155 -FLQIPVFIALMESLRGMSGNNSGIIAWLSSFIESSQDPASTAQPLHLTIEPTLANEGAL 213

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP-----IIMSLSMFIQMKMSPPPADKG 515
           W  DL A DPT +  L           M   + P     ++  + M+ Q   +       
Sbjct: 214 WFPDLLAGDPTGVLPLCLTASILGNVLMGWKVKPWKEIALLPKIEMYKQTLFTG------ 267

Query: 516 QAMILNWMPVVFV--FALSSF----PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
               L    +V       +SF    P  L++YW  S  ++ +Q  V+ K   +  G    
Sbjct: 268 ----LRSFVIVLTCYIGFASFVQGMPTALMLYWITSTNVATLQTWVLDKKVFSPPGFKRF 323

Query: 570 LRSTFSKNYN 579
           +  + +    
Sbjct: 324 VEKSIAFEKP 333


>gi|256088544|ref|XP_002580391.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial)
           [Schistosoma mansoni]
 gi|238665960|emb|CAZ36630.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial),
           putative [Schistosoma mansoni]
          Length = 314

 Score = 46.1 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 5/186 (2%)

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438
            + + +  A + N +   +   +K      Q+ ++  I+  + +  +PL      ++QIP
Sbjct: 90  QQNRQMIQAKLSNAEYYRNISNKKQLLLENQLFRRFFIKTCEENGCHPLKSSVTGIIQIP 149

Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498
           ++      I      +  P +     L A    N+     +LPF         +    + 
Sbjct: 150 LWLTFTFSIRYLSGFQLYPQFD-SNHLIADSSLNVPCSGFLLPFICTLAGVANVELACLR 208

Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVV--FVFA--LSSFPAGLIIYWSWSNVISIVQQA 554
             +F   K +    D     I+ +   V  F      S FP   +IYW  S+V  +    
Sbjct: 209 RPLFFNPKSNSVIPDPLPYNIVRFAGWVGNFTLFACCSFFPKAFVIYWCTSSVHQLCIHI 268

Query: 555 VIMKMH 560
           +IM  +
Sbjct: 269 LIMHPY 274


>gi|330932025|ref|XP_003303619.1| hypothetical protein PTT_15915 [Pyrenophora teres f. teres 0-1]
 gi|311320243|gb|EFQ88274.1| hypothetical protein PTT_15915 [Pyrenophora teres f. teres 0-1]
          Length = 333

 Score = 46.1 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 80/313 (25%), Gaps = 68/313 (21%)

Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359
            S+      +  +          KD  +     L             +         V  
Sbjct: 18  SSVIPRASTWCPSTRAFHASAPRKDALVDAILYLPHEMMSLIHTTVPWYAAIPISAFVAR 77

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAM 415
             +          LL              ++     + +   +  +         L++A 
Sbjct: 78  GLLVTTAGVHARSLLARWFGLLPLRHALALQKRDEMLQQRTFRTPREATLAAKNELRQAA 137

Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIY--------------------------KVISI 449
             L K             L QIP+FFA+                            +++ 
Sbjct: 138 SALDKRWKTTLKGQIGWTLGQIPIFFAMAETIRQKCGAQDGLMGMGIAAIKGEGTTMVNE 197

Query: 450 SLEM--RHAPF-----------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496
           S E+  R  P              W  DL   DP                   +G+ P I
Sbjct: 198 SGELVVRVTPTAWFEPSLANEGMLWFPDLLVPDP-------------------MGVLPFI 238

Query: 497 MSLSMF--IQMKMSPPPADKG----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
           +S  MF  I    + PP D          L  + ++        PA L++YW  S    +
Sbjct: 239 VSGLMFSNIYFTKNAPPTDAKWPKFIRRTLLSVALLIGPLGQQMPAALMLYWCSSTTSVM 298

Query: 551 VQQAVIMKMHGAE 563
           +    + + + AE
Sbjct: 299 LWNVWLDRKYPAE 311


>gi|240280153|gb|EER43657.1| mitochondrial export translocase Oxa2 [Ajellomyces capsulatus H143]
          Length = 279

 Score = 45.8 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 48/155 (30%), Gaps = 40/155 (25%)

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           G   IL Q      +   I +   +       W  DL AADP                  
Sbjct: 70  GLLAILQQWFNPDGVKAQIPVEPSLSSQGA-LWFPDLMAADP------------------ 110

Query: 489 HVGIWPIIMSLSMFIQ-------MKMSPPPADKGQ-----------AMILNWMPVVFVFA 530
            +G+ P+ +S+ MF          KM   P    Q             I   M +     
Sbjct: 111 -LGVLPVAISVLMFTHITWGSKVSKMKDLPKLVSQGNLQGIFSWAIQRIFQAMSIWIAPT 169

Query: 531 LSSF--PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           L     PA L IYW  +  ++IVQ  ++ K     
Sbjct: 170 LLYSEAPAALSIYWLSTTCVAIVQSRLLKKYMPTP 204


>gi|146079970|ref|XP_001463916.1| hypothetical protein [Leishmania infantum JPCM5]
 gi|134068004|emb|CAM66289.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|322497304|emb|CBZ32380.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 441

 Score = 45.8 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 71/219 (32%), Gaps = 51/219 (23%)

Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV- 410
           +    +G +G       + +++L    +   + ++  M +I P+I E+     ++     
Sbjct: 150 FMSFDLGGWGHVFFFYGLCMRVLTLIPSLYSHRNSLRMAHIGPQISEITNNQNKAKNDRT 209

Query: 411 ------------LQKAMIQLYKTHNINPLAGCWPIL---LQIPVFFAIYKVISISLEMRH 455
                         +    L K HN +            + +  F +I ++     ++  
Sbjct: 210 LSSAEKRVIKDGYNRMKYALCKKHNCSQWKSFLTTFTTPITMSAFLSIRRLAMYETDLEM 269

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           AP + W+KDL   DPT                      P I    MF+   ++     + 
Sbjct: 270 AP-FLWVKDLTMPDPTY-------------------ALPAI-CAGMFL---LNFEMNQRM 305

Query: 516 QAM-----------ILNWMPVVFVFALSSFPAGLIIYWS 543
           Q             ++    VV ++  +  P+ +  YW 
Sbjct: 306 QRGGRSASGLYVRWVVRASSVVGIYFFAGQPSAMFAYWI 344


>gi|207345808|gb|EDZ72510.1| YER154Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 275

 Score = 45.8 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 72/223 (32%), Gaps = 13/223 (5%)

Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321
             +  +       F+          A   +   T LP     T++     A     I + 
Sbjct: 24  TIVLPRPHPSWISFQAKRFNSTGPNANDVSEIQTQLPSIDELTSSAPSLSASTSDLIANT 83

Query: 322 EKDLA-----IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLF 375
            + +      I     +     +Y+ +  +  ++   +   G      I  TT+ ++ L 
Sbjct: 84  TQTVGELSSHIGYLNSIGLAQTWYWPSDIIQHVLEAVHVYSGLPWWGTIAATTILIRCLM 143

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-------LA 428
           FPL  K   + A   +I+P++D L  K   +      + +    K    +         A
Sbjct: 144 FPLYVKSSDTVARNSHIKPELDALNNKLMSTTDLQQGQLVAMQRKKLLSSHGIKNRWLAA 203

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471
               I + +  F A+  + +  ++        W  DL  ADP 
Sbjct: 204 PMLQIPIALGFFNALRHMANYPVDGFANQGVAWFTDLTQADPY 246


>gi|110755911|ref|XP_001120913.1| PREDICTED: mitochondrial inner membrane protein COX18-like [Apis
           mellifera]
          Length = 347

 Score = 45.4 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 87/257 (33%), Gaps = 18/257 (7%)

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389
             ++       + A  M   +     +     I  + T    + L F L +        +
Sbjct: 79  LRLMHYQTGLPWWASIMLTSIIARTIINLPLNILDVHTKAKQENLKFELREIAEKIQKKV 138

Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           +     ++    +      +   K   QLY  +N +P      ILLQ P++ +       
Sbjct: 139 QRQALSLELSPYRAHYLFTRDFNKEQKQLYIKNNCHPFKSVAIILLQAPIWISF------ 192

Query: 450 SLEMRHAPFWGWIKDLAA-ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
           S+ +R+  +     + A   D   + T        L    H  I P +  LS    ++++
Sbjct: 193 SVAVRNICYMLPQVNTATLQDFKELTTGGFGWIKNLIDIDHYFILPSLFGLSNLAILEIN 252

Query: 509 PP---PADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM---- 557
                  D   + I       + + FV  ++  P+ L ++W  +N  +IV   +++    
Sbjct: 253 QVLFHVKDSKFSRIYKNFCRVLIIGFVPLMACLPSCLSLFWVTNNCCAIVYNLLLLSPKV 312

Query: 558 KMHGAEIGLIDRLRSTF 574
           +  G        LR  +
Sbjct: 313 RRLGKIPKTDSELRRPY 329


>gi|71755549|ref|XP_828689.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|70834075|gb|EAN79577.1| hypothetical protein, conserved [Trypanosoma brucei]
          Length = 418

 Score = 45.4 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 66/214 (30%), Gaps = 51/214 (23%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV------ 410
            G +G       +F++L     +   + +   + +I P++ E+     ++          
Sbjct: 130 FGGWGNVFFFYGIFMRLCTLVPSLLSHRNALRLSHINPQLSEIATCQNRAKSDRSLSTAE 189

Query: 411 -------LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL---EMRHAPFWG 460
                    +    L K H+         ++       A   V  +++   ++  AP + 
Sbjct: 190 KRVIKEGYNRMKYALMKKHHCAQWKNFLSMITAPVTLSAFISVRRLAVYETDLERAP-FL 248

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-- 518
           WI DL   DPT                      P+I    MF+   M+       Q    
Sbjct: 249 WIVDLTMPDPTYG-------------------LPMI-CAGMFL---MNFELNQMMQRGGR 285

Query: 519 ---------ILNWMPVVFVFALSSFPAGLIIYWS 543
                     +    V+ V+  SS PA +  YW 
Sbjct: 286 SSTGLYVRWGMRVGSVIGVYFFSSQPAAMFAYWI 319


>gi|198418301|ref|XP_002119790.1| PREDICTED: similar to MGC131222 protein [Ciona intestinalis]
          Length = 352

 Score = 45.4 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 101/305 (33%), Gaps = 42/305 (13%)

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358
             + +     ++    + T   +  D  I +   L       F   P ++ ++    L+ 
Sbjct: 48  SSNFSEDYGKYSEPGTYETFIGWFTDSGIIQSVELYLTSMHDFTHLPWWLSITLSTFLLR 107

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
              +  M       ++ +           N   +  +    ++K+  +   +  K  +  
Sbjct: 108 GIVMTPMTIYQMKNMIKYQSFIPVLEKLQNKLKLDVEKAAEKKKWDDATKVLNYKVNLNH 167

Query: 419 YKTHNI--NPLAGCW----PILLQIPVFFAIYKVIS-ISLEMRHAPF------------- 458
           YK   +  N + G         +QIP++ ++   +  ++L ++  P              
Sbjct: 168 YKRKMMKDNQIPGILKRYGLPFVQIPLWVSMSVAMRHLTLNLQFTPPSDQLLIVASQLST 227

Query: 459 --WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI---WPIIMSLSMFIQMKMSPPPAD 513
               W  DL + DP  +  +       L   +H G       +    ++           
Sbjct: 228 EGCLWFVDLCSVDPYFLLPVLLCAVNLLIIEIHRGGRNELIGLNKAFVYF---------- 277

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
                 +  + V+ +   S  PAG+++YW  S+V   +Q A+++K +  +  +   +   
Sbjct: 278 ------MRTIAVILLPIASQMPAGVVMYWLSSSVYGAIQ-ALVLKSYRFKKLVEIPISPN 330

Query: 574 FSKNY 578
            SK  
Sbjct: 331 DSKTP 335


>gi|258576489|ref|XP_002542426.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237902692|gb|EEP77093.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 229

 Score = 45.4 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 68/194 (35%), Gaps = 55/194 (28%)

Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH---------------A 456
           +K M +LYK  NI P    +   +Q+PV+  + + I   + M                 A
Sbjct: 11  RKKMKELYKRWNIRP-WTRYAPWVQLPVWLTMMESIRRMVGMSGGLLNIIQSWVEKHPEA 69

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-------QMKMSP 509
           P    ++ L+         L    P         G+ P I++ ++F            SP
Sbjct: 70  PKVPIVQSLSTEGALWFPDLLVADPN--------GVLPAILAATVFTNVTWGWKTQ--SP 119

Query: 510 PPADKG-------------------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
               K                    QA  L   PV+    +S  PAG++IYW  S + + 
Sbjct: 120 EEISKMVLRKERIKARGLGILKRTFQASALLLWPVM---TMSEVPAGMLIYWISSTLFAT 176

Query: 551 VQQAVIMKMHGAEI 564
            Q  ++ K+  A+ 
Sbjct: 177 AQTRILPKIIAAKP 190


>gi|115389208|ref|XP_001212109.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114194505|gb|EAU36205.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 263

 Score = 45.4 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 71/241 (29%), Gaps = 62/241 (25%)

Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432
           L       K Y      K  Q     L    ++   + ++K   +L+K   + P      
Sbjct: 18  LPLLNSWSKYYSQDLLRKKAQSPDSILPPDIRRDLAKNIKKKREELHKRFEVVPYWKGLN 77

Query: 433 ILLQIPVFFAIYKVIS-------------------------ISLEMRHAPFW-----GWI 462
             LQIPV+ +I + +                            + +   P        W 
Sbjct: 78  -FLQIPVWISIMESLRAMSGNDKGLVPYLLSLVEPASSTTSSPVHLAVEPSLATEGALWF 136

Query: 463 KDLAAADPTNIFTLFGILP--------FYLPGFMHVGIWP--------IIMSLSMFIQMK 506
            DL A D T I      L         + +P    +   P        I   +  FIQ  
Sbjct: 137 PDLLAGDATGILPAALTLSILLNVRTGWKVPPLRDLADLPKPELAKQFIYRGIRTFIQ-- 194

Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
                           + V     +S  P+ L+IYW  S+ ++ +Q   + K   A+  L
Sbjct: 195 -------------FLALNVGLSAYVSGMPSALMIYWITSSNVATLQTLFLEKYMFAKKPL 241

Query: 567 I 567
            
Sbjct: 242 K 242


>gi|261334581|emb|CBH17575.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 418

 Score = 45.4 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 66/214 (30%), Gaps = 51/214 (23%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV------ 410
            G +G       +F++L     +   + +   + +I P++ E+     ++          
Sbjct: 130 FGGWGNVFFFYGIFMRLCTLVPSLLSHRNALRLSHINPQLSEIATCQNRAKSDRSLSTAE 189

Query: 411 -------LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL---EMRHAPFWG 460
                    +    L K H+         ++       A   V  +++   ++  AP + 
Sbjct: 190 KRVIKEGYNRMKYALMKKHHCAQWKNFLSMITAPVTLSAFISVRRLAVYETDLERAP-FL 248

Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-- 518
           WI DL   DPT                      P+I    MF+   M+       Q    
Sbjct: 249 WIVDLTMPDPTYG-------------------LPMI-CAGMFL---MNFELNQMMQRGGR 285

Query: 519 ---------ILNWMPVVFVFALSSFPAGLIIYWS 543
                     +    V+ V+  SS PA +  YW 
Sbjct: 286 SSTGLYVRWGMRVGSVIGVYFFSSQPAAMFAYWI 319


>gi|238596974|ref|XP_002394199.1| hypothetical protein MPER_05950 [Moniliophthora perniciosa FA553]
 gi|215462847|gb|EEB95129.1| hypothetical protein MPER_05950 [Moniliophthora perniciosa FA553]
          Length = 198

 Score = 45.4 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 55/194 (28%), Gaps = 27/194 (13%)

Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC-WPILLQIPVFF 441
                     +      +E+         +    +L+K H  +PL     P L QIP F 
Sbjct: 1   MQRVRITGEKEYPEKIHKERCTAIMTARRK----ELWKIHKCSPLITMAVPPLSQIPPFV 56

Query: 442 AIYKVISI----SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497
            +  + +           +     +  L  ADPT    +   L       ++  +     
Sbjct: 57  IMTMIFARLSADPFSGFDSESVFTLTTLNHADPTMTMPVILGLLTMANVEVNNWVLT--- 113

Query: 498 SLSMFIQMK-MSPPPADKGQ---------AMI----LNWMPVVFVFALSSFPAGLIIYWS 543
             +     K +        Q           I    +  + V  +   +  P  + +YW 
Sbjct: 114 -ATEKGMQKEIQEKKEQIAQEQGVRHIEPQKIVKSAMRVLSVGRIGLGAIAPGAVCLYWV 172

Query: 544 WSNVISIVQQAVIM 557
            S    +VQ  ++ 
Sbjct: 173 TSAAFGLVQTWILN 186


>gi|198417734|ref|XP_002128332.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 272

 Score = 45.4 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 18/184 (9%)

Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439
            K        + +  K  +L+         + ++ + + +K H   P++     L    +
Sbjct: 1   MKSSQVMPLQQKMMTKFQKLQRSSDPVQQALGRQKLQKFFKKHGTGPVSTLANSLPMPII 60

Query: 440 FF----AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL--FGILPFYLPGFMHVGIW 493
           F     AI ++ ++ +    A    W++ L A DP  +  L   G++   +      G  
Sbjct: 61  FMSSITAIRQMSAVPVPSLEATSLLWMESLVAGDPYRVLPLVTGGVIGITIHSSFKSG-- 118

Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553
            +I  +S     KM   P           MP++        P  + +Y   +   + +  
Sbjct: 119 -MIAGVSPSTIQKMKFVPLLPI-----VLMPLLMG----HLPCSITLYILTNTCFTYLST 168

Query: 554 AVIM 557
            ++ 
Sbjct: 169 LLLQ 172


>gi|170595399|ref|XP_001902367.1| hypothetical protein [Brugia malayi]
 gi|158589998|gb|EDP28782.1| conserved hypothetical protein [Brugia malayi]
          Length = 392

 Score = 45.4 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 32/105 (30%), Gaps = 32/105 (30%)

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516
                  DL  +DP  +      + F       + I                     + Q
Sbjct: 167 SGMLSFTDLTVSDPAFLLPTLTAICFTFTTKKWIEIL--------------------QMQ 206

Query: 517 AMILNWM----------PVV--FVFALSSFPAGLIIYWSWSNVIS 549
             + NWM          P+     F  S+ P+ + IYW  S++IS
Sbjct: 207 KTVSNWMLGLKPYNTIYPIAACSFFVASNVPSVVCIYWITSSLIS 251


>gi|322489311|emb|CBZ24569.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 445

 Score = 45.0 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 30/249 (12%), Positives = 76/249 (30%), Gaps = 44/249 (17%)

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
                  ++   I    +      F++   WG  +F       L++   +L  +      
Sbjct: 133 VSFLQPVEKQVEIMRSLRHDGFMSFDLG-GWGHVFFFYGLCMRLLTLIPSLYSHRN---- 187

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
                +++        +  +  N       +    ++  +     ++ A+ + +K     
Sbjct: 188 ----SLRMAHIGPQISEITNNQNKAKNDRTLSSAEKRVIKDGYNRMKYALCKKHKCSQWK 243

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
                + + + +  F +I ++     ++  AP + W+KDL   DPT              
Sbjct: 244 SFLTTFTMPITMSAFLSIRRLAMYETDLEMAP-FLWVKDLTMPDPTY------------- 289

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-----------ILNWMPVVFVFALSSF 534
                   P I    MF+   ++     + Q              +    +V ++  +  
Sbjct: 290 ------ALPAI-CAGMFL---LNFEMNQRMQRGGRSASGLYVRWAVRASSLVGIYFFAGQ 339

Query: 535 PAGLIIYWS 543
           P+ +  YW 
Sbjct: 340 PSAMFAYWI 348


>gi|299747770|ref|XP_001837247.2| hypothetical protein CC1G_00383 [Coprinopsis cinerea okayama7#130]
 gi|298407670|gb|EAU84864.2| hypothetical protein CC1G_00383 [Coprinopsis cinerea okayama7#130]
          Length = 326

 Score = 45.0 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 68/189 (35%), Gaps = 22/189 (11%)

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
           +    ++  +P + E   K  Q      +K +++ +       +    P L+Q+P FF I
Sbjct: 107 MKADKIRGDKPFLIEYHAKRCQEILNARRKELMREHGCQTWKSM--LVPPLVQLPPFFVI 164

Query: 444 YKVISISLE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
             ++    E      +  +  + +L   DPT    +   +        +      +M+ +
Sbjct: 165 TLMLRRLSEGPTPFDSEAFFTLTNLVHPDPTMTLPILLGVITMANVETNNW----LMTAT 220

Query: 501 MFIQMKMSPPPADKGQA---------MILN----WMPVVFVFALSSFPAGLIIYWSWSNV 547
               +K      +K +A          I+      + V+ +   S  P  + +YW  S  
Sbjct: 221 QRANLKKLEEKREKMKAEGKRILEPGKIIKNALRGLSVIRILVASVMPGSISLYWVTSAS 280

Query: 548 ISIVQQAVI 556
           + +VQ  ++
Sbjct: 281 LGLVQTWIM 289


>gi|321474738|gb|EFX85702.1| hypothetical protein DAPPUDRAFT_313414 [Daphnia pulex]
          Length = 150

 Score = 45.0 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
              +P +      +F   ++ YW  +NVIS+VQ
Sbjct: 22  FRAIPFIMFPITMNFSGAILCYWLTTNVISLVQ 54


>gi|258571093|ref|XP_002544350.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237904620|gb|EEP79021.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 310

 Score = 45.0 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 35/71 (49%), Gaps = 5/71 (7%)

Query: 490 VGIWPIIMSLSMFIQMK----MSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSW 544
           +   P++   S+++ +K    M     +      +   MP++   A+  +PA L +Y++ 
Sbjct: 91  ISSLPLVTGGSVYLAIKRGGEMGMDIKNSPLGKFMLVGMPLISTVAMLFWPAVLQLYFAS 150

Query: 545 SNVISIVQQAV 555
           + ++++VQ  +
Sbjct: 151 TGILALVQSYL 161


>gi|322698535|gb|EFY90304.1| mitochondrial export translocase Oxa2 [Metarhizium acridum CQMa
           102]
          Length = 348

 Score = 45.0 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 15/95 (15%)

Query: 459 WGWIKDLAAADPTNIFT-----LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
             W  DL A DP  +       L     +       +G+   +         +    P  
Sbjct: 211 CLWFVDLTAMDPYYVLPMLCSALLARTSWGRLSKDQLGVLLSLDG------SRTPKTPMA 264

Query: 514 KGQAMI---LNWMPVVFVFALSSFPAGLIIYWSWS 545
           + Q  I   L  +P+ F    +  P+ + +YW+ +
Sbjct: 265 RIQTGIGRALLLIPL-FPMLFADLPSAIFVYWATT 298


>gi|320169653|gb|EFW46552.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 2564

 Score = 44.6 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 57/466 (12%), Positives = 136/466 (29%), Gaps = 32/466 (6%)

Query: 92   LNLRGYHLDVSSNSPIVTLLSPSNTKN--AYFAELDYVSTANNIELPNSNTVWNLISGKI 149
            + L+ Y  +   N     L+S +       Y           +  L +            
Sbjct: 1847 VVLKNYIREQGDNIKSYNLVSDTANYLNVLYHNVSSDNIELVSQVLESLVEFCQGNGDNQ 1906

Query: 150  LTPTTPIKLVFKNANNILFERT-ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208
            +       L   N      E T +   +    K+       ++ + +     ++ +    
Sbjct: 1907 IAVFDAKCLDGINHIFRQHEYTGMPCPQVAELKLHAANLVLTMLEEQTEQAIQLSKELHT 1966

Query: 209  TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268
                    +         +      Y+          +   + L      + +    +K 
Sbjct: 1967 QLDIRAIHENMTRYHYEHQHSKHLGYTAEHPEPADVAYVFYNILASLSD-FTTTNYNAKP 2025

Query: 269  TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF-------AGAKEFPTIHHY 321
             +     K                  T +   +++ T  +          +K    + H 
Sbjct: 2026 YTVKPSTKGGKPEAEGSAKSDKVKLETNIKLINVSYTGTVHGSVRLGSVSSKNLTALAHG 2085

Query: 322  EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381
             K+ A     +          A       S    ++ N  ++ +   V  +    P AK+
Sbjct: 2086 NKNAAKTFKVLPSKLYVQAPSAYAAIQGQSGSIEVLRNDILSKVHFRVRNRDALRPAAKE 2145

Query: 382  QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
            + + T +  +   KI +   + +    +      ++  +    NP++  +  +   P F+
Sbjct: 2146 RLLWTVDRSSPTDKIRDFISQCQDIRDE------MKYQEQLLSNPISSFF--VRGSPFFY 2197

Query: 442  AIYKVISISLEMRHAPFWGWIKDLAAA-DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500
              + V+ ++L +        +   +A  DPT+         +Y P     G   + +S  
Sbjct: 2198 --WGVLLVTLLL----NIFILVSWSAPTDPTD--WRPNTDDWYNPLLYIFGGIHVALSAC 2249

Query: 501  MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII--YWSW 544
             FI+  ++ PP    Q   L   P+ ++  L    AG+ +  Y+  
Sbjct: 2250 TFIEFFLTHPPTRPQQ--FLTLAPIYYILFLGMSIAGITVRGYFFC 2293


>gi|153871522|ref|ZP_02000673.1| Lipid transport protein [Beggiatoa sp. PS]
 gi|152072013|gb|EDN69328.1| Lipid transport protein [Beggiatoa sp. PS]
          Length = 690

 Score = 44.6 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 70/281 (24%), Gaps = 25/281 (8%)

Query: 1   MERNWNYFVAIALSVII-VYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59
           M     + +  A  VII V      Y  P    + +     Q+ K   Q   S       
Sbjct: 1   MMNYKKFLLITAFLVIIGVVGGLFLYETPSPPTVESSEPVPQSSKSVPQSSKSVPQSQPV 60

Query: 60  DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119
            +      +P++ +K  +L                          +      S SN +  
Sbjct: 61  TQTPLPESAPKITIK-DALKLRF----------------KPSDGQTLAFQFESESNAQID 103

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
           +      ++T+ N      +           +    +K      +       ++   + L
Sbjct: 104 FTFITPNIATSGNSATQAPSQGQKTPVLMQTSGELYLKYFALKPDVWQVAGQLAKVNYQL 163

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKP------QTATNTFGVQEGFIAVLGDKSLVEQK 233
            +      +       F         +        T    F  Q  +       +  + +
Sbjct: 164 NQATPRYADAISYPFAFQMNTLGFLSRFQFTKNIPTEAQQFVEQMLYTLQTAYPTDPKIE 223

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274
           +   E      +       G  DK   +  I  ++ ++ S 
Sbjct: 224 WQTKEIDKTGRYQAVYKLDG-LDKKTGTATITKQKRNYLST 263


>gi|68467713|ref|XP_722015.1| hypothetical protein CaO19.11428 [Candida albicans SC5314]
 gi|68468032|ref|XP_721855.1| hypothetical protein CaO19.3946 [Candida albicans SC5314]
 gi|46443797|gb|EAL03076.1| hypothetical protein CaO19.3946 [Candida albicans SC5314]
 gi|46443962|gb|EAL03240.1| hypothetical protein CaO19.11428 [Candida albicans SC5314]
          Length = 331

 Score = 44.6 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 63/186 (33%), Gaps = 18/186 (9%)

Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444
              +++     I+   E+      +  +K   +L+  + +           Q+P++  + 
Sbjct: 121 DITSIQASSTLINMKYEQILLLSAKEARKRQKELFAKNGVQLWKNFILPAFQVPLWIMMS 180

Query: 445 KVIS-----ISLEMRH---------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
             +       S +  H              W +DL+ ADP ++F +   +         +
Sbjct: 181 ITMRDLSGWSSWDNTHNKALDPSLYEEGILWFQDLSIADPMHVFPVILGITALCNIEWTL 240

Query: 491 GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550
                +  L+  +  K  P   D     +     V  +      PA L IYW  S + S+
Sbjct: 241 KTLE-LSRLTKKL--KFRPTLTDAF-GNLTKMSIVFMMAISLHAPAALTIYWISSQLYSL 296

Query: 551 VQQAVI 556
           +Q  ++
Sbjct: 297 LQNVMM 302


>gi|241955997|ref|XP_002420719.1| cytochrome c oxidase assembly protein, putative; mitochondrial
           inner membrane protein, putative [Candida dubliniensis
           CD36]
 gi|223644061|emb|CAX41804.1| cytochrome c oxidase assembly protein, putative [Candida
           dubliniensis CD36]
          Length = 331

 Score = 44.6 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 57/174 (32%), Gaps = 18/174 (10%)

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-----ISL 451
           +   E+      +  +    +L+  + +           Q+P++  +   +       S 
Sbjct: 133 NMKYEQILLLSAKESRNRQKELFAKNGVQLWKNFILPTFQVPLWIMMSITMRDLSGWSSW 192

Query: 452 EMRH---------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           +  H              W +DL+ ADP +IF +   +         +     +  L+  
Sbjct: 193 DNTHNKALDPSLYEEGILWFQDLSIADPMHIFPVILGITALCNIEWTLKTLE-LSRLTKK 251

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +  K  P   D     +     V  +      PA L IYW  S   S++Q  ++
Sbjct: 252 L--KFRPTLTDAF-GNLTKMSIVFMMAISLHAPAALTIYWISSQFYSLLQNVMM 302


>gi|321254854|ref|XP_003193221.1| cytochrome c oxidase biogenesis-related protein [Cryptococcus
           gattii WM276]
 gi|317459690|gb|ADV21434.1| cytochrome c oxidase biogenesis-related protein, putative
           [Cryptococcus gattii WM276]
          Length = 460

 Score = 44.2 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           A IL +  + F    S  P+G+++YW  S   S VQ   +
Sbjct: 403 AGILRFSAIGFAMIASQMPSGVVLYWFTSLCYSFVQNFFL 442


>gi|212638599|ref|YP_002315119.1| hypothetical protein Aflv_0755 [Anoxybacillus flavithermus WK1]
 gi|212560079|gb|ACJ33134.1| Uncharacterized conserved protein [Anoxybacillus flavithermus
          WK1]
          Length = 198

 Score = 44.2 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 27/74 (36%), Gaps = 2/74 (2%)

Query: 6  NYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
          N F+AI  ++I+ + W+  +    P  E   + +       +P   +         +  Q
Sbjct: 19 NTFIAIVFALILFFGWKWLFANDRPTKETNASPQPVEVETNEPPNDEQPSETETETNEQQ 78

Query: 64 ALSMSPRVELKNPS 77
          +        + +P+
Sbjct: 79 SNDNVEETVVDDPN 92


>gi|238882837|gb|EEQ46475.1| hypothetical protein CAWG_04830 [Candida albicans WO-1]
          Length = 294

 Score = 43.8 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 59/174 (33%), Gaps = 18/174 (10%)

Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-----ISL 451
           +   E+      +  +K   +L+  + +           Q+P++  +   +       S 
Sbjct: 96  NMKYEQILLLSAKEARKRQKELFAKNGVQLWKNFILPAFQVPLWIMMSITMRDLSGWSSW 155

Query: 452 EMRH---------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
           +  H              W +DL+ ADP ++F +   +         +     +  L+  
Sbjct: 156 DNTHNKALDPSLYEEGILWFQDLSIADPMHVFPVILGITALCNIEWTLKTLE-LSRLTKK 214

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           +  K  P   D     +     V  +      PA L IYW  S + S++Q  ++
Sbjct: 215 L--KFRPTLTDAF-GNLTKMSIVFMMAISLHAPAALTIYWISSQLYSLLQNVMM 265


>gi|303316666|ref|XP_003068335.1| 60Kd inner membrane protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240108016|gb|EER26190.1| 60Kd inner membrane protein [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 277

 Score = 43.8 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 68/229 (29%), Gaps = 51/229 (22%)

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433
                  + +      K    +        +     +L+K   +LYK   I P       
Sbjct: 19  PLVVGWGRYFQGAVLTKAAVNRAYISPNAAEIQSQLLLRKKTKELYKRWKIRPWTRF-AP 77

Query: 434 LLQIPVFFAIYKVISISLEMRH---------------APFW-----------GWIKDLAA 467
           L Q+PV+  + + +   + M                 AP              W  DL A
Sbjct: 78  LFQLPVWLTMMESMRRMVGMTGGLLSIVQGWLEKHPEAPNVPMVPSLSTEGALWFPDLLA 137

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGI--------WPI----IMSLSMFIQMKMSPPPADKG 515
           ADP     +      +        I         P     I + +M +  +     A   
Sbjct: 138 ADPYCALPVILSAAVFTNVTWGWKIKKREDIPKLPTRKERIAAHTMRVLKRTFQASA--- 194

Query: 516 QAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                 ++ PV+     S  PAG++IYW  S + +  Q   + K+   +
Sbjct: 195 -----LFLCPVM---IASEVPAGMLIYWISSTLFATAQTKALPKIISTK 235


>gi|119187951|ref|XP_001244582.1| hypothetical protein CIMG_04023 [Coccidioides immitis RS]
          Length = 277

 Score = 43.8 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 68/228 (29%), Gaps = 49/228 (21%)

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433
                  + +      K    +        +     +L+K   +LYK   I P       
Sbjct: 19  PLVVGWGRYFQGAVLTKAAVNRAYISPNAAEIQSQLLLRKKTKELYKRWKIRPWTRF-AP 77

Query: 434 LLQIPVFFAIYKVISISLEMRH---------------APFW-----------GWIKDLAA 467
           L Q+PV+  + + +   + M                 AP              W  DL A
Sbjct: 78  LFQLPVWLTMMESMRRMVGMTGGLLSIVQGWLEKHPEAPNVPMVPSLYTEGALWFPDLLA 137

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGI--------WPI----IMSLSMFIQMKMSPPPADKG 515
           ADP     +      +        I         P     I + +M +  +         
Sbjct: 138 ADPYCALPVILSAAVFTNVTWGWKIKKREDIPKLPTRKERIAAHTMRVLKR-------AF 190

Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           QA  L   PV+     S  PAG++IYW  S + +  Q   + K+   +
Sbjct: 191 QASALFLCPVMIA---SEVPAGMLIYWISSTLFATAQTKALPKIISTK 235


>gi|50303879|ref|XP_451887.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|2493875|sp|P78990|COX18_KLULA RecName: Full=Mitochondrial inner membrane protein COX18; AltName:
           Full=Cytochrome c oxidase assembly protein 18; Flags:
           Precursor
 gi|1869938|emb|CAA72198.1| COX18 [Kluyveromyces lactis]
 gi|49641019|emb|CAH02280.1| KLLA0B08019p [Kluyveromyces lactis]
          Length = 313

 Score = 43.8 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 62/175 (35%), Gaps = 30/175 (17%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR----HAPFWGWIKD 464
           + ++K    L+K +N+         L+Q+P++  +   +    + R    + P    ++D
Sbjct: 134 KEMRKRQKVLFKKYNVQMWKNSVLPLVQVPLWVTMSMGLRKLTDSRLVDTNMPHAHVLQD 193

Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--------- 515
           L+    T+  T  G L   LP      + PII+     I ++ +                
Sbjct: 194 LSE---TSWLTHIGSLDLSLPLDAAPMLIPIILGTVSMINVEYNGKTMQATAVGTSGITT 250

Query: 516 --------QAMILNWMP------VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
                      + + +       +  +   +     L +YW  S V S++Q  ++
Sbjct: 251 ATDTQSRTSQTVNSILTATRLSTIFLIGVSTQASVLLSLYWITSQVYSLIQNRIL 305


>gi|71409239|ref|XP_806976.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70870870|gb|EAN85125.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 428

 Score = 43.8 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 61/185 (32%), Gaps = 35/185 (18%)

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429
            +++ +      +  +  N       +    ++  +     ++ A+++ +          
Sbjct: 170 ALRMSYIGPQISEITNNQNRVKNDRTLSSAEKRVIKDGYNRMKYALMKKHGCAQWKSFFT 229

Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489
                + +  FF+I ++     ++  AP + W+KDL   DPT                  
Sbjct: 230 MLTAPITMSAFFSIRRLAVYESDLEMAP-FLWVKDLTMPDPTYG---------------- 272

Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAM-----------ILNWMPVVFVFALSSFPAGL 538
               P+I    MF+   ++     + Q              +    +V V+  +S P+ +
Sbjct: 273 ---LPLI-CAGMFL---VNFELNQQMQRGGRSSSGIYIRWAVRAASLVGVYMFASQPSAM 325

Query: 539 IIYWS 543
             YW 
Sbjct: 326 FAYWI 330


>gi|156839295|ref|XP_001643340.1| hypothetical protein Kpol_472p13 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113946|gb|EDO15482.1| hypothetical protein Kpol_472p13 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 282

 Score = 43.8 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 17/168 (10%)

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF----FAIYKVISISLEMRHA 456
           E+      +  +K   +L+K +N++        L+QIP++      I K+   S  +   
Sbjct: 107 EQITYLSMKETRKRQKKLFKKYNVDMWKNVLLPLVQIPLWVTISLGIRKLTDGSTTLIET 166

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--- 513
                I D++      + +   +LP  L     + +     +  MF   K +    D   
Sbjct: 167 NNIYNILDVSTDLSLALDSAPFLLPIVLGTVSLINV---EYNGIMF--NKRNFKGYDNTK 221

Query: 514 --KGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
             K    IL       +  +   S     L +YW  S V S++Q  ++
Sbjct: 222 LSKTTQSILTVSRLGSIFMMGVSSQASILLTVYWITSQVFSLIQNYIL 269


>gi|328543718|ref|YP_004303827.1| RIP metalloprotease RseP [polymorphum gilvum SL003B-26A1]
 gi|326413462|gb|ADZ70525.1| RIP metalloprotease RseP [Polymorphum gilvum SL003B-26A1]
          Length = 378

 Score = 43.8 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 6/117 (5%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
           N+ +AI +   +  A+      P IE++  E    Q   QP  +  +     I   ++  
Sbjct: 125 NFLLAIVIFAFVFAAFGRVVTSPLIEKVQPESAAEQANLQPGDLVLAVDGKPITTFSELQ 184

Query: 66  SMSPRVELKNPS-LIGSINLKGAQFDDLNLRGYHLDVSS--NSPIVTLLSPSNTKNA 119
                V +     L   I+ KG          +     S  N+  + LL  + +   
Sbjct: 185 ---RIVTVSADVPLQLDIDRKGEVLRIEVTPQHREVTDSFGNTQRIGLLGVTRSPKP 238


>gi|319950636|ref|ZP_08024541.1| hypothetical protein ES5_13650 [Dietzia cinnamea P4]
 gi|319435711|gb|EFV90926.1| hypothetical protein ES5_13650 [Dietzia cinnamea P4]
          Length = 61

 Score = 43.8 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 520 LNWMPV--VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569
           +   P   +      +FP  + +YW  +N+ + VQ  + M+    E+ +  R
Sbjct: 1   MYLFPFFPIVGAYFFNFPIAIGLYWLTNNIWTAVQSHIFMEKLEKELPMSSR 52


>gi|6321499|ref|NP_011576.1| Cox18p [Saccharomyces cerevisiae S288c]
 gi|1706079|sp|P53239|COX18_YEAST RecName: Full=Mitochondrial inner membrane protein COX18; AltName:
           Full=Cytochrome c oxidase assembly protein 18; Flags:
           Precursor
 gi|1323081|emb|CAA97064.1| COX18 [Saccharomyces cerevisiae]
 gi|1398937|gb|AAB03186.1| Cox18p [Saccharomyces cerevisiae]
 gi|151943342|gb|EDN61655.1| cytochrome C oxidase [Saccharomyces cerevisiae YJM789]
 gi|285812258|tpg|DAA08158.1| TPA: Cox18p [Saccharomyces cerevisiae S288c]
 gi|323304836|gb|EGA58594.1| Cox18p [Saccharomyces cerevisiae FostersB]
          Length = 316

 Score = 43.8 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465
           +  +K   +L+K +N+         ++QIP++  +   I    E +    +   W   L 
Sbjct: 146 KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 205

Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519
            ++ D   P     L   +       ++V +   +M  S      +     +    Q  +
Sbjct: 206 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAM 265

Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            + + V      V +   S  P  L +YW  S + S+VQ  ++  ++ 
Sbjct: 266 TSILNVSRLGCVVMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 313


>gi|323355023|gb|EGA86854.1| Cox18p [Saccharomyces cerevisiae VL3]
          Length = 316

 Score = 43.8 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465
           +  +K   +L+K +N+         ++QIP++  +   I    E +    +   W   L 
Sbjct: 146 KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 205

Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519
            ++ D   P     L   +       ++V +   +M  S      +     +    Q  +
Sbjct: 206 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAM 265

Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            + + V      V +   S  P  L +YW  S + S+VQ  ++  ++ 
Sbjct: 266 TSILNVSRLGCVVMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 313


>gi|228990708|ref|ZP_04150673.1| hypothetical protein bpmyx0001_14700 [Bacillus pseudomycoides DSM
           12442]
 gi|228769234|gb|EEM17832.1| hypothetical protein bpmyx0001_14700 [Bacillus pseudomycoides DSM
           12442]
          Length = 290

 Score = 43.8 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 58/226 (25%), Gaps = 10/226 (4%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GY-----HLDVSSNSPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y            +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISEKGAELQSVRLKEDNTEYMWQGNPNYWGRRAPILFPIVGRLVDNIYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +     
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETKITYAVTSNQETLQKYPYEFELRVSYELDEQNIH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
           +   V N +  ++ FS       + P     +F                  K   + K  
Sbjct: 124 VTYEVINPTSKEMFFSIGAHPGFNCPLIEDESFTDYHLSFNGPEHLETNVLKGPFLSKEK 183

Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
                         D +     I     +     +          A
Sbjct: 184 QLMVENKTELPLTYDLFKNDALIFENMNTNEISIRSHKHNKFVKVA 229


>gi|256269091|gb|EEU04427.1| Cox18p [Saccharomyces cerevisiae JAY291]
          Length = 316

 Score = 43.8 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465
           +  +K   +L+K +N+         ++QIP++  +   I    E +    +   W   L 
Sbjct: 146 KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 205

Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519
            ++ D   P     L   +       ++V +   +M  S      +     +    Q  +
Sbjct: 206 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAM 265

Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            + + V      V +   S  P  L +YW  S + S+VQ  ++  ++ 
Sbjct: 266 TSILNVSRLGCVVMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 313


>gi|154333548|ref|XP_001563031.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134060040|emb|CAM41998.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 381

 Score = 43.8 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 30/249 (12%), Positives = 76/249 (30%), Gaps = 44/249 (17%)

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
                  ++   I    +       ++   WG  +F       +++   +L  +      
Sbjct: 69  VSFLQPVEKQVEIMRSLRHDGFMSLDLG-GWGHVFFFYGLCMRVLTLIPSLYSHRN---- 123

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
                +++        +  ++ N       +    ++  +     ++ A+ + ++     
Sbjct: 124 ----SLRMAHIGPQVSEITNSQNKVKNDRTLSSAEKRVIKDGYNRMKYALCKRHRCAQWK 179

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
                    + +  F +I ++     ++  AP + W+KDL   DPT              
Sbjct: 180 SFLTVLTAPITMSAFLSIRRLAMYETDLEMAP-FLWVKDLTMPDPTY------------- 225

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ-----AMILNW------MPVVFVFALSSF 534
                   P I    MF+   ++     + Q     A  +          VV V+  ++ 
Sbjct: 226 ------ALPAI-CAGMFL---LNFEMNQRMQRGGRSASSMYVRWAVRASSVVGVYFFAAQ 275

Query: 535 PAGLIIYWS 543
           P+ +  YW 
Sbjct: 276 PSAMFAYWI 284


>gi|255723309|ref|XP_002546588.1| hypothetical protein CTRG_06066 [Candida tropicalis MYA-3404]
 gi|240130719|gb|EER30282.1| hypothetical protein CTRG_06066 [Candida tropicalis MYA-3404]
          Length = 329

 Score = 43.4 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 60/187 (32%), Gaps = 20/187 (10%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEMRH-------- 455
           + ++K    L+  + +           QIP++  +   +       S +  H        
Sbjct: 143 KEVRKRQKALFAKNGVQLWKNFILPAFQIPLWIIMSITMRNLSGWSSWDYTHNKALDPTL 202

Query: 456 -APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514
                 W  DL  ADP ++F +   +         +     +  L+  +  K  P   D 
Sbjct: 203 YTEGMLWFPDLTIADPMHVFPVILGITALCNIEWTLRTLE-LSRLTKKL--KFRPTLTDA 259

Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574
               +     V  +      PA L IYW  S V S+ Q  ++       I    + R  +
Sbjct: 260 F-GNLTRLSMVFMMAISLHAPAALTIYWISSQVYSLFQNVIM--DLAFPISFTPKTRFNY 316

Query: 575 SKNYNSQ 581
            K+ N  
Sbjct: 317 KKSKNDD 323


>gi|163789980|ref|ZP_02184415.1| hypothetical protein CAT7_10020 [Carnobacterium sp. AT7]
 gi|159874680|gb|EDP68749.1| hypothetical protein CAT7_10020 [Carnobacterium sp. AT7]
          Length = 292

 Score = 43.4 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 70/290 (24%), Gaps = 16/290 (5%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN---SPIVTLLSPSNTKNAYFAEL 124
            L+N  L+  I  KGA+   +  +     Y      +   S    L       N Y    
Sbjct: 3   TLENEQLLIKIATKGAELQKIYNKQENFDYLWTGDPDFWGSHAPNLFPTIGRLNDYKYTK 62

Query: 125 DYVSTANNIELPNSNTVWNLISGKILTP--TTPIKLVFKNANNILFERTISLD-EHYLFK 181
           D  +          +  + +      T           K      F   IS + E    K
Sbjct: 63  DGKTYELPQHGFAKDLEFEVAESSDTTAVFVLKSTDETKAMYPYNFSLAISYNLEGSKLK 122

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
               VTN S + + FS  G    + P     T+      I    + +  E         +
Sbjct: 123 TTYQVTNESTETMPFSIGGHPAFNIPMNGEGTYDDYTLTIDPKKEVNYFESNPVPYRSGN 182

Query: 242 ISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT----- 295
              F    N  L ++ + +    I   E +  +      +         S          
Sbjct: 183 KKPFKDMENGVLSMNHETFRDGLIIIDEPTIETVTLSSPNSKHGVTLGISEFPYLCLWTK 242

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
                        +        I   E+   I   E        + I   
Sbjct: 243 EQMDAPFICIEPFYGLPDVIGEIGTLEEKEGIILLEASEQKEVSFTITTF 292


>gi|259415121|ref|ZP_05739043.1| PEP-utilising enzyme, mobile region [Silicibacter sp. TrichCH4B]
 gi|259349031|gb|EEW60785.1| PEP-utilising enzyme, mobile region [Silicibacter sp. TrichCH4B]
          Length = 1353

 Score = 43.4 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 82/246 (33%), Gaps = 38/246 (15%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
            + G +    + +   + + +N        ++   +  +++  P+A K       +++ +
Sbjct: 400 QESGLWDKAIQGITQALIWGHNKSHLLLSLLV-MALISRIMVLPIALKSERDQIKLRDHK 458

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
            +++EL+       P    +A+   Y  H + P+     +L    +   +      S  +
Sbjct: 459 TELNELKS-TLAHDPMRKARAIRGFYAKHGLTPMRNMAALLFLPLMMLGLQAAERASSGI 517

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV------GIWPIIMSLSMFIQMKM 507
                + WI DL A DP  I          L   + +       +  + + +        
Sbjct: 518 --VEGFLWIADLGAPDPLWIAPALTCALAGLYLVLAIAKSRRSAVLWLGLGV-------- 567

Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI---MKMHGAEI 564
                           P +FV  +    AG  +Y   S +  + Q   +    +  G ++
Sbjct: 568 ----------------PALFVLTMGLSAAG-NLYLCMSLIGLLAQYLFVSGTFRRIGHKL 610

Query: 565 GLIDRL 570
            ++ RL
Sbjct: 611 RMLSRL 616


>gi|189196594|ref|XP_001934635.1| predicted protein [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187980514|gb|EDU47140.1| predicted protein [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 334

 Score = 43.4 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 40/108 (37%), Gaps = 19/108 (17%)

Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518
             W  DL   DPT      G+LPF   G         +M  S F     SPP   K   +
Sbjct: 220 MLWFPDLLIPDPT------GMLPFIASG---------LM-FSNFFFTNNSPPTGAKWPTI 263

Query: 519 I---LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           I   L +  +       + PA L++YW  S    I+    + +M+   
Sbjct: 264 IRRTLLFASLCIGPLCQNLPAALMLYWCSSTTSVILWNVWLDRMYPVP 311


>gi|71064048|gb|AAZ22475.1| Cox18p [Saccharomyces cerevisiae]
          Length = 316

 Score = 43.4 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465
           +  +K   +L+K +N+         ++QIP++  +   I    E +    +   W   L 
Sbjct: 146 KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 205

Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519
            ++ D   P     L   +       ++V +   +M  S      +     +    Q  +
Sbjct: 206 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAM 265

Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            + + V      V +   S  P  L +YW  S + S+VQ  ++  ++ 
Sbjct: 266 TSILNVSRLGCVVMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 313


>gi|260578639|ref|ZP_05846548.1| membrane protein OxaA [Corynebacterium jeikeium ATCC 43734]
 gi|258603267|gb|EEW16535.1| membrane protein OxaA [Corynebacterium jeikeium ATCC 43734]
          Length = 336

 Score = 43.4 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 100/299 (33%), Gaps = 84/299 (28%)

Query: 317 TIHHYEKDLAIPRF-EMLIDWGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIML 366
            +        +P+   M         +  P+ + +  ++ L           ++ +A++L
Sbjct: 5   VLRFRGFPYRVPQLPSMAGKLTSMKIVEYPVALFLKAWHYLFADIFGWDAAQSWLLALVL 64

Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTH 422
             V V+ L  P   +Q  S+  + NI+PK+  L +++        +K       +L K H
Sbjct: 65  LIVTVRSLLLPFVYRQSYSSRILVNIRPKVYRLEQEYSDDKSAEGRKELGKRRRELQKEH 124

Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
                 GC P L+QIPV   +Y+++                 + + DP    ++ G  P 
Sbjct: 125 EYRFSDGCIPALIQIPVLLGLYRMLIH---------------VTSPDPEINASVNGFGPL 169

Query: 483 Y---LPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQ-------AMI---------- 519
               +   +   ++ + M+   ++QM  S        K Q         I          
Sbjct: 170 NAEEVQSLLSAKLFGVPMAA--YVQMADSQFAEIHTTKEQVFWVVFPMAILAAIFTTSNW 227

Query: 520 -----------------------LNWM--PVVFV-FALSSF----PAGLIIYWSWSNVI 548
                                  + W+  PVV +     +     P  L+IYW  +N+ 
Sbjct: 228 GYSMYRNYLTVDHNSGLARGLLKMMWLIGPVVLLAPFTIALGAVGPVALMIYWVGNNLW 286


>gi|228996810|ref|ZP_04156444.1| hypothetical protein bmyco0003_13950 [Bacillus mycoides Rock3-17]
 gi|229004486|ref|ZP_04162227.1| hypothetical protein bmyco0002_14410 [Bacillus mycoides Rock1-4]
 gi|228756771|gb|EEM06075.1| hypothetical protein bmyco0002_14410 [Bacillus mycoides Rock1-4]
 gi|228762871|gb|EEM11784.1| hypothetical protein bmyco0003_13950 [Bacillus mycoides Rock3-17]
          Length = 290

 Score = 43.4 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 58/226 (25%), Gaps = 10/226 (4%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GY-----HLDVSSNSPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y            +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISEKGAELQSVRLKEDNTEYMWQGNPNYWGRRAPILFPIVGRLVDNIYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +     
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETKITYAVTSNQETLQKYPYEFELRVSYELDEQNIH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
           +   V N +  ++ FS       + P     +F                  K   + K  
Sbjct: 124 VTYEVINPTSKEMFFSIGAHPGFNCPLIEGESFTDYHLSFNGPEHLETNVLKGPFLSKEK 183

Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
                         D +     I     +     +          A
Sbjct: 184 QLMVENKTELPLTYDLFKNDALIFENMNTNEISIRSHKHNKFVKVA 229


>gi|312278739|gb|ADQ63396.1| Serine/threonine protein kinase [Streptococcus thermophilus ND03]
          Length = 623

 Score = 43.4 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/185 (10%), Positives = 53/185 (28%), Gaps = 17/185 (9%)

Query: 7   YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66
             +      II++A+  F     ++  N   + + T +   +        + +    +++
Sbjct: 344 VLLGFVFIGIIIFAYLVFTNPDNVQVPNVVGQELSTAQTKLESAGFKVGDVKEVENDSVN 403

Query: 67  MSPRVELKNPSLIGSINLKGAQFD--------DLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                 +K     G++  +GA  D           L+ Y      ++         +  +
Sbjct: 404 KGK--VIKTDPTAGTMRKEGASIDVYVSSGSKGFTLKNYKGKNYKDA-------IEDLTS 454

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            Y    D +   +  +           S +      P     K    +   + I++ +  
Sbjct: 455 NYGVSEDQIDIQHVEDDNAKEGEILSQSSEKNKSFNPKDSKAKIKFRVATPKPITMPDVT 514

Query: 179 LFKIV 183
              + 
Sbjct: 515 GLTVS 519


>gi|116628133|ref|YP_820752.1| serine/threonine kinase protein [Streptococcus thermophilus LMD-9]
 gi|116101410|gb|ABJ66556.1| serine/threonine protein kinase [Streptococcus thermophilus LMD-9]
          Length = 623

 Score = 43.4 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/185 (10%), Positives = 53/185 (28%), Gaps = 17/185 (9%)

Query: 7   YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66
             +      II++A+  F     ++  N   + + T +   +        + +    +++
Sbjct: 344 VLLGFVFIGIIIFAYLVFTNPDNVQVPNVVGQELSTAQTKLESAGFKVGDVKEVENDSVN 403

Query: 67  MSPRVELKNPSLIGSINLKGAQFD--------DLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                 +K     G++  +GA  D           L+ Y      ++         +  +
Sbjct: 404 KGK--VIKTDPTAGTMRKEGASIDVYVSSGSKGFTLKNYKGKNYKDA-------IEDLTS 454

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            Y    D +   +  +           S +      P     K    +   + I++ +  
Sbjct: 455 NYGVSEDQIDIQHVEDDNAKEGEILSQSSEKNKSFNPKDSKAKIKFRVATPKPITMPDVT 514

Query: 179 LFKIV 183
              + 
Sbjct: 515 GLTVS 519


>gi|310657633|ref|YP_003935354.1| hypothetical protein CLOST_0319 [Clostridium sticklandii DSM 519]
 gi|308824411|emb|CBH20449.1| protein of unknown function [Clostridium sticklandii]
          Length = 342

 Score = 43.4 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 61/195 (31%), Gaps = 19/195 (9%)

Query: 4   NWN--YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
             N      +AL VI+++    ++   + E  N   +  Q     NQ   +      + +
Sbjct: 76  KRNSGVIAVVALLVIVIFGGGYWFFSQKGENDNIADQPNQNADSSNQNSEASNEGTGETQ 135

Query: 62  AQALSMSP------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
              L+ S       R  L  P    +               Y   ++      +   P+ 
Sbjct: 136 QTELTSSQLDLTKARTYLSTPGYKSTF-----------FVNYPDGMAGVVERFSGRGPNA 184

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
            +    +E++ V           + V        +  +TP ++     +++   +T S +
Sbjct: 185 NEGVIVSEVEVVRENGEDYGYGFHYVTRQDGSYYILDSTPFEIYSHLKDDLSIGKTWSYE 244

Query: 176 EHYLFKIVDTVTNNS 190
           +     IV TV +  
Sbjct: 245 DEVFGDIVWTVMDMG 259


>gi|210614343|ref|ZP_03290162.1| hypothetical protein CLONEX_02376 [Clostridium nexile DSM 1787]
 gi|210150687|gb|EEA81696.1| hypothetical protein CLONEX_02376 [Clostridium nexile DSM 1787]
          Length = 217

 Score = 43.4 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 4/97 (4%)

Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416
           + N G++I++ TV V  L  P+  KQ   +     + P+I ++++K+K    Q     M 
Sbjct: 36  IENIGLSIIIFTVIVYTLMIPMTIKQQKFSRMSAVMNPEIQKIQKKYKNKKDQASMMKMQ 95

Query: 417 QLYK----THNINPLAGCWPILLQIPVFFAIYKVISI 449
           +  K     +  +P  GC   L+Q P+ FA++ VI  
Sbjct: 96  EETKLVYEKYGTSPTGGCLGSLIQFPILFALWPVIQN 132


>gi|320038141|gb|EFW20077.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 277

 Score = 43.1 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 66/229 (28%), Gaps = 51/229 (22%)

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433
                  + +      K    +        +     +L+K   +LYK   I P       
Sbjct: 19  PLVVGWGRYFQGAVLTKAAVNRAYISPNAAEIQSQLLLRKKTKELYKRWKIRPWTRF-AP 77

Query: 434 LLQIPVFFAIYKVISISLEMRH--------------------------APFWGWIKDLAA 467
           L Q+PV+  + + +   + M                                 W  DL A
Sbjct: 78  LFQLPVWLTMMESMRRMVGMTGGLLSIVQGWLEKHPEVPNVPMVPSLSTEGALWFPDLLA 137

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGI--------WPI----IMSLSMFIQMKMSPPPADKG 515
           ADP     +      +        I         P     I + +M +  +     A   
Sbjct: 138 ADPYCALPVILSAAVFTNVTWGWKIKKREDIPKLPTRKERIAAHTMRVLKRTFQASA--- 194

Query: 516 QAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
                 ++ PV+     S  PAG++IYW  S + +  Q   + K+   +
Sbjct: 195 -----LFLCPVM---IASEVPAGMLIYWISSTLFATAQTKALPKIISTK 235


>gi|170780887|ref|YP_001709219.1| putative integral membrane protein [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|169155455|emb|CAQ00563.1| putative integral membrane protein [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 255

 Score = 43.1 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 1/91 (1%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
            G+A++L T+ V+ +  P+   Q  +      I P + ELR +    P Q+ + A+ +LY
Sbjct: 36  TGVAVILLTLVVRAVLVPVGVAQVRAEIQRLRIAPALAELRRRHAGKPEQMSR-AVQELY 94

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
                +PLAGC P L Q PV  A+Y + + +
Sbjct: 95  AREGASPLAGCLPTLAQAPVLAAVYTLFAHA 125


>gi|322388104|ref|ZP_08061710.1| hypothetical protein HMPREF9423_1108 [Streptococcus infantis ATCC
           700779]
 gi|321141125|gb|EFX36624.1| hypothetical protein HMPREF9423_1108 [Streptococcus infantis ATCC
           700779]
          Length = 416

 Score = 43.1 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/242 (9%), Positives = 65/242 (26%), Gaps = 7/242 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M++N   ++ + L + I   +  F      +    +    + +K   +  +        +
Sbjct: 1   MKKNAILYLGVVLLLAIFLLFSLFINRKESKRQEVQSTTTEVIKSDFEDISGDYISSTGE 60

Query: 61  RAQALSMSP--RVELKNP--SLIGSINL---KGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
           +A     +   R+       ++ G  +    K              D + +  I  L++ 
Sbjct: 61  KATVAKNNQNWRISYNTDEGNVFGDFSTDWKKDGNNRSSVTEFNKSDGNKDFKISILVNN 120

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
            +  +     +       N E+  ++      + K       +       +N   E+ I+
Sbjct: 121 VDDSSNILTVITLSDGNKNHEMVFASRTDYFKNSKDNILQGDLSDFKGTYSNDNLEKAIA 180

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
                L+          I  +      +       + +     +          +   + 
Sbjct: 181 ESNFTLYGYKREDYYKGITSVFPRLSYQDGYWMFWSGSMHAQFKLDKSKKPKKINDYYEV 240

Query: 234 YS 235
           Y 
Sbjct: 241 YF 242


>gi|294865723|ref|XP_002764473.1| cytochrome oxidase biogenesis protein, putative [Perkinsus marinus
           ATCC 50983]
 gi|239863945|gb|EEQ97190.1| cytochrome oxidase biogenesis protein, putative [Perkinsus marinus
           ATCC 50983]
          Length = 279

 Score = 43.1 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 77/234 (32%), Gaps = 53/234 (22%)

Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN-PLAGCWPIL 434
               + +      +  +  ++ E  +K  Q      Q    Q  K H     + G   + 
Sbjct: 1   MRAGRIKQRIMPQLDALSAEMKEAEKKGSQQQLIRAQTKYSQFIKEHGSMVTMKGMMGMF 60

Query: 435 LQIPVF----FAIYKVISISLEMRHAPF--WGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           +QIP+F     ++ ++ +     +  P     W+  LA +DP                  
Sbjct: 61  VQIPIFTTAFLSMRQMSNHPHIFKGFPMETPLWLDSLALSDP------------------ 102

Query: 489 HVGIWPIIMSLSM-----FIQMKMSPPPADK------------GQAMILNW-------MP 524
            + + P++ S  +     F     S   A+              Q  +  +       + 
Sbjct: 103 -IIVLPVLASALLLTNIEFFGSLDSAQAAEAGDRPDTKNKLGIDQKTMQKYSRHGFRALC 161

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE--IGLIDRLRSTFSK 576
           V+ + A    PAGL +Y   + + +I Q   I+++   E  + +   ++    K
Sbjct: 162 VIALPATMYLPAGLFVYTCTNALWAITQNR-ILRLPIVEQALNIPHNIKKEEKK 214


>gi|55821411|ref|YP_139853.1| protein kinase [Streptococcus thermophilus LMG 18311]
 gi|55823336|ref|YP_141777.1| protein kinase [Streptococcus thermophilus CNRZ1066]
 gi|55737396|gb|AAV61038.1| protein kinase [Streptococcus thermophilus LMG 18311]
 gi|55739321|gb|AAV62962.1| protein kinase [Streptococcus thermophilus CNRZ1066]
          Length = 623

 Score = 43.1 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/185 (10%), Positives = 54/185 (29%), Gaps = 17/185 (9%)

Query: 7   YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66
             +      II++A+  F     ++  N   + + T +   +        + +    +++
Sbjct: 344 VLLGFVFIGIIIFAYLVFTNPDNVQVPNVVGQELSTAQTKLESAGFKVGDVKEVENDSVN 403

Query: 67  MSPRVELKNPSLIGSINLKGAQFD--------DLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                 +K     G++  +GA  D           L+ Y      ++         +  +
Sbjct: 404 KGK--VIKTDPTAGTMRKEGASIDVYVSSGSKGFTLKNYKGKNYKDA-------IEDLTS 454

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            Y    D +   +  +           S +      P     K    +   +TI++ +  
Sbjct: 455 NYGVSEDQIDIQHVEDDNAKEGEILSQSSEKNKSFNPKDSKAKIKFRVATPKTITMPDVT 514

Query: 179 LFKIV 183
              + 
Sbjct: 515 GLTVS 519


>gi|71004786|ref|XP_757059.1| hypothetical protein UM00912.1 [Ustilago maydis 521]
 gi|46096863|gb|EAK82096.1| hypothetical protein UM00912.1 [Ustilago maydis 521]
          Length = 428

 Score = 43.1 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 509 PPPADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           P   +  +A I+      M + F+      P+ L+IYW  S + +++Q +++
Sbjct: 354 PEDDEPPRARIMTNALRIMAIAFIPIACQAPSILVIYWLSSGIYTLLQNSIL 405


>gi|238060836|ref|ZP_04605545.1| membrane protein [Micromonospora sp. ATCC 39149]
 gi|237882647|gb|EEP71475.1| membrane protein [Micromonospora sp. ATCC 39149]
          Length = 299

 Score = 43.1 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)

Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423
           I+L T+ V+LL  PL   Q         + P++ +LR +   + P  LQ  +  LY++  
Sbjct: 77  IVLFTIAVRLLISPLTLAQVRGERRRAVLAPQVRDLRRRHA-ADPARLQGELFALYRSAG 135

Query: 424 INPLAGCWPILLQIPVFFAIYKVISI 449
            +P+AGC P LLQ P F  +Y++ S 
Sbjct: 136 ASPVAGCLPALLQAPFFLVMYRLFST 161


>gi|68535167|ref|YP_249872.1| putative preprotein translocase subunit [Corynebacterium jeikeium
           K411]
 gi|68262766|emb|CAI36254.1| putative preprotein translocase subunit [Corynebacterium jeikeium
           K411]
          Length = 309

 Score = 43.1 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 91/263 (34%), Gaps = 74/263 (28%)

Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402
           A        + ++   ++ +A++L  V V+ L  P   +Q  S+  + NI+PK+  L ++
Sbjct: 14  AWHYLFADIFGWDAAQSWLLALVLLIVTVRSLLLPFVYRQSYSSRILVNIRPKVYRLEQE 73

Query: 403 FKQSPPQVLQKA----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458
           +        +K       +L K H      GC P L+QIPV   +Y+++           
Sbjct: 74  YSDDKSAEGRKELGKRRRELQKEHEYRFSDGCIPALIQIPVLLGLYRMLIH--------- 124

Query: 459 WGWIKDLAAADPTNIFTLFGILPFY---LPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512
                 + + DP    ++ G  P     +   +   ++ + M+   ++QM  S       
Sbjct: 125 ------VTSPDPEINASVNGFGPLNAEEVQSLLSAKLFGVPMAA--YVQMADSQFAEIHT 176

Query: 513 DKGQ-------AMI---------------------------------LNWM--PVVFV-F 529
            K Q         I                                 + W+  PVV +  
Sbjct: 177 TKEQVFWVVFPMAILAAIFTTSNWGYSMYRNYLTVDHNSGLARGLLKMMWLIGPVVLLAP 236

Query: 530 ALSSF----PAGLIIYWSWSNVI 548
              +     P  L+IYW  +N+ 
Sbjct: 237 FTIALGAVGPVALMIYWVGNNLW 259


>gi|224168586|ref|XP_002198909.1| PREDICTED: hypothetical protein, partial [Taeniopygia guttata]
          Length = 199

 Score = 43.1 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 38/108 (35%), Gaps = 9/108 (8%)

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
                  +     ++    +  +    + +++ + +LY   N +P      + +Q+P++ 
Sbjct: 85  AQRLRYEVSARGKQLGWSEKVARLHFARNMRRIVTELYIRDNCHPFKATLLLWVQVPMWV 144

Query: 442 AIYKVISI-SLEMRH--------APFWGWIKDLAAADPTNIFTLFGIL 480
            +   +   S+  R         +    W  DL A D T I  +   L
Sbjct: 145 CVSLALRNCSVGARGSAVQEQFSSGGALWFTDLTAPDSTWILPVSLGL 192


>gi|157865754|ref|XP_001681584.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68124881|emb|CAJ02994.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 407

 Score = 42.7 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/249 (11%), Positives = 73/249 (29%), Gaps = 44/249 (17%)

Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365
                  ++   I    +      F++   WG  +F       +++   +L  +      
Sbjct: 95  VSFLQPVEKQVEIMRSLRHDGFMSFDLG-GWGHVFFFYGLCMRVLTLIPSLYSHRN---- 149

Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
                +++        +  +  N       +    ++  +     ++  + + +      
Sbjct: 150 ----SLRMAHIGPQISEITNNQNKAKNDRTLSSAEKRVIKDGYNRMKYVLCKKHNCSQWK 205

Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485
                  + + +  F +I ++     ++  AP + W+KDL   DPT              
Sbjct: 206 SFLTTLTMPITMSAFLSIRRLAMYETDLEMAP-FLWVKDLTMPDPTY------------- 251

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-----------ILNWMPVVFVFALSSF 534
                   P I    MF+   ++     + Q              +    VV ++  +  
Sbjct: 252 ------ALPAI-CAGMFL---LNFEMNQRMQRGGRSASGLYVRWAVRASSVVGIYFFAGQ 301

Query: 535 PAGLIIYWS 543
           P+ +  YW 
Sbjct: 302 PSAMFAYWI 310


>gi|207345181|gb|EDZ72082.1| YGR062Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 216

 Score = 42.7 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465
           +  +K   +L+K +N+         ++QIP++  +   I    E +    +   W   L 
Sbjct: 46  KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 105

Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519
            ++ D   P     L   +       ++V +   +M  S      +     +    Q  +
Sbjct: 106 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAM 165

Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            + + V      V +   S  P  L +YW  S + S+VQ  ++  ++ 
Sbjct: 166 TSILNVSRLGCVVMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 213


>gi|218262803|ref|ZP_03477161.1| hypothetical protein PRABACTJOHN_02841 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223135|gb|EEC95785.1| hypothetical protein PRABACTJOHN_02841 [Parabacteroides johnsonii
           DSM 18315]
          Length = 74

 Score = 42.7 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580
           GL  Y+  S +I+I+Q  +I +    E  L+ +L     K    
Sbjct: 1   GLTYYYFISTLITILQT-IIFRYTIDEDKLLAKLEENKKKPMKK 43


>gi|322825862|gb|EFZ30698.1| hypothetical protein TCSYLVIO_3006 [Trypanosoma cruzi]
          Length = 428

 Score = 42.7 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 43/119 (36%), Gaps = 1/119 (0%)

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429
            +++ +      +  +  N       +    ++  +     ++ A+++ +          
Sbjct: 170 ALRMSYIGPQISEITNNQNRVKNDRTLSTAEKRVIKDGYNRMKYALMKKHGCAQWKSFFT 229

Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
                + +  FF+I ++     ++  AP + W+KDL   DPT    L     F +   +
Sbjct: 230 MLTAPITMSAFFSIRRLAVYESDLEMAP-FLWVKDLTMPDPTYGLPLICAGMFLVNFEL 287


>gi|71666514|ref|XP_820215.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70885551|gb|EAN98364.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 428

 Score = 42.3 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 43/119 (36%), Gaps = 1/119 (0%)

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429
            +++ +      +  +  N       +    ++  +     ++ A+++ +          
Sbjct: 170 ALRMSYIGPQISEITNNQNRVKNDRTLSTAEKRVIKDGYNRMKYALMKKHGCAQWKSFFT 229

Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
                + +  FF+I ++     ++  AP + W+KDL   DPT    L     F +   +
Sbjct: 230 MLTAPITMSAFFSIRRLAVYESDLEMAP-FLWVKDLTMPDPTYGLPLICAGMFLVNFEL 287


>gi|212528340|ref|XP_002144327.1| mitochondrial export translocase Oxa2, putative [Penicillium
           marneffei ATCC 18224]
 gi|210073725|gb|EEA27812.1| mitochondrial export translocase Oxa2, putative [Penicillium
           marneffei ATCC 18224]
          Length = 340

 Score = 42.3 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 76/244 (31%), Gaps = 48/244 (19%)

Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438
            KK Y      K+++ ++       ++   Q + K  I +YK  NI P    +  LLQIP
Sbjct: 100 MKKHYEDAIRAKHLEDRLHMRDRAAEKQMAQEMHKRAIAVYKEWNI-PTYPQYLPLLQIP 158

Query: 439 VFFAIYKVISI----------------------SLEMRHAPFW------GWIKDLAAADP 470
           ++ ++ + I                        ++ +             W  DL A D 
Sbjct: 159 IWLSLMEGIRNMCGVNMGLLRYFVPASNGNGGHAVNLPGMEPSLANEGALWFPDLLAGDS 218

Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSL--SMFIQMKMSPPPADKGQAMILNWMPVVFV 528
           T I  L   L                 +   S+F    M           +   + V  +
Sbjct: 219 TYILPLILSLSIIANVRTGFKTMSFAEASDHSIFRMATMVSAVT------MKQLLTVGAL 272

Query: 529 FALSS-----FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID------RLRSTFSKN 577
           +   +      PAG+++YW  S   + +Q   + K   A   L        R+     K 
Sbjct: 273 WIGYTASVTGMPAGMMLYWIASTNTATLQAWFLDKFLFASKPLSGLQGMHVRVLKPGEKK 332

Query: 578 YNSQ 581
              +
Sbjct: 333 PPVK 336


>gi|22655125|gb|AAM98153.1| unknown protein [Arabidopsis thaliana]
          Length = 426

 Score = 42.3 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 56/145 (38%), Gaps = 34/145 (23%)

Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-----GWIKDLAAADPTNIFTLFGILP 481
           L     + +Q+P FF +   I     +   P +      W ++L+               
Sbjct: 68  LWFFPYLSVQLPCFFLLMASIRKM-SLDGHPGFDSGGVLWFQNLS--------------- 111

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-----ILNW-------MPVVFVF 529
             LPG     ++PI+++   +I +++S   +   Q       ++ +       + V   F
Sbjct: 112 -DLPGGSFGPVFPILIATFHYINIQISFDTSTIRQTTGLTGLLMRYYKLYLEILSVPLFF 170

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQA 554
              + P G ++YW  ++ ++I QQ 
Sbjct: 171 VGYAIPQGSLVYWVTNSSVNIFQQL 195


>gi|154297723|ref|XP_001549287.1| hypothetical protein BC1G_12273 [Botryotinia fuckeliana B05.10]
 gi|150858402|gb|EDN33594.1| hypothetical protein BC1G_12273 [Botryotinia fuckeliana B05.10]
          Length = 325

 Score = 41.9 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 73/229 (31%), Gaps = 23/229 (10%)

Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404
               L +     V  F + I       K +        +      ++IQ       +   
Sbjct: 67  FTLPLTALAIRTVLIFPLGINSRRAAQKQIDLMPLMNAWQHQFRKQSIQEVGHLGPDAAN 126

Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464
           Q     + K   +LY  ++           LQ+PV+    + I       H     WI+ 
Sbjct: 127 QFVKDKMNKKKRELYSRYSCGTWKHYL-PFLQLPVWMIAVETIRKMCG-AHDGLLKWIES 184

Query: 465 L---------AAADPTNIFTLFGILPFYLPGFMHVG---------IWPIIMSLSMFIQMK 506
           L         AA    ++ +L     F   G +            I P ++S S+ + + 
Sbjct: 185 LFISSKANEAAATTDLDLGSLLLEPTFATEGALWFPNLLISDPMLILPFMLSGSILLNLT 244

Query: 507 MSPPPADKGQAMIL---NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
               P       ++     + +  +      P+ +++YW+ S++++  Q
Sbjct: 245 GQGKPKSVFMKRLMNSLKVVALAIIPLTLQMPSAMLVYWTSSSLLAFGQ 293


>gi|153825479|ref|ZP_01978146.1| hypothetical protein A5A_1930 [Vibrio cholerae MZO-2]
 gi|149740891|gb|EDM54976.1| hypothetical protein A5A_1930 [Vibrio cholerae MZO-2]
          Length = 568

 Score = 41.9 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 69/222 (31%), Gaps = 6/222 (2%)

Query: 5   WNYFVA--IALSVIIVYAWQNFYVYPRIEEMNN----ERKNIQTVKQPNQVDNSYAAVLI 58
               +   I L V +++++  F+     E+               K     +N+Y    +
Sbjct: 2   KKIIILYTIGLLVSLIFSYYFFFNNHNQEKHQQGLYYTESYDSVTKNKKADENAYKTYDV 61

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
              +  ++ + ++  K  +    ++       D  +       +S+   + L      KN
Sbjct: 62  KLTSTLINGTEKINQKLDNFKMKLHFSDGIIQDGTVYDITTSETSDEIPIYLPFTYKYKN 121

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
             F ++  +  + + +L    T+ N  S    T    +   +     I  E    +    
Sbjct: 122 GLFQDISLLDLSPDHKLNLIQTILNDFSYSTSTDEVVLNSAYMERKYIYNENAKQVTRKK 181

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
           +        ++ +++             P+  T+ F  +  F
Sbjct: 182 IIVTDHNDNSDILNEHENWLLSLNDDGTPRDLTSYFYKEINF 223


>gi|90076410|dbj|BAE87885.1| unnamed protein product [Macaca fascicularis]
          Length = 253

 Score = 41.9 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 8/127 (6%)

Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
            +     +  L+ + + +L   +  AI   TVF + L FPL        A + N  P+I 
Sbjct: 118 SHTPVGLVQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVVGQREAAKIHNHLPEIQ 177

Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450
           +   + +++          +         K H I         L Q P+F + +  +   
Sbjct: 178 KFSSRVREAKLAGDDTEFYKASSEVALYQKKHGIKLFKPLILPLTQAPIFLSFFIALREM 237

Query: 451 LEMRHAP 457
             +  A 
Sbjct: 238 ANLPVAS 244


>gi|239633948|gb|ACR84160.1| oxidase assembly 1-like protein [Lepus granatensis]
 gi|239633950|gb|ACR84161.1| oxidase assembly 1-like protein [Lepus granatensis]
 gi|239633952|gb|ACR84162.1| oxidase assembly 1-like protein [Lepus granatensis]
 gi|239633954|gb|ACR84163.1| oxidase assembly 1-like protein [Lepus granatensis]
 gi|239633956|gb|ACR84164.1| oxidase assembly 1-like protein [Lepus granatensis]
 gi|239633958|gb|ACR84165.1| oxidase assembly 1-like protein [Lepus granatensis]
 gi|239633960|gb|ACR84166.1| oxidase assembly 1-like protein [Lepus granatensis]
 gi|239633964|gb|ACR84168.1| oxidase assembly 1-like protein [Lepus europaeus]
 gi|239633966|gb|ACR84169.1| oxidase assembly 1-like protein [Lepus europaeus]
 gi|239633968|gb|ACR84170.1| oxidase assembly 1-like protein [Lepus europaeus]
 gi|239633970|gb|ACR84171.1| oxidase assembly 1-like protein [Lepus europaeus]
 gi|239633974|gb|ACR84173.1| oxidase assembly 1-like protein [Lepus europaeus]
 gi|239633976|gb|ACR84174.1| oxidase assembly 1-like protein [Lepus castroviejoi]
 gi|239633978|gb|ACR84175.1| oxidase assembly 1-like protein [Lepus castroviejoi]
 gi|239633980|gb|ACR84176.1| oxidase assembly 1-like protein [Lepus castroviejoi]
 gi|239633982|gb|ACR84177.1| oxidase assembly 1-like protein [Lepus castroviejoi]
 gi|239633984|gb|ACR84178.1| oxidase assembly 1-like protein [Lepus castroviejoi]
 gi|239633986|gb|ACR84179.1| oxidase assembly 1-like protein [Lepus castroviejoi]
 gi|239633988|gb|ACR84180.1| oxidase assembly 1-like protein [Lepus timidus]
 gi|239633990|gb|ACR84181.1| oxidase assembly 1-like protein [Lepus timidus]
 gi|239633992|gb|ACR84182.1| oxidase assembly 1-like protein [Lepus timidus]
 gi|239633994|gb|ACR84183.1| oxidase assembly 1-like protein [Lepus timidus]
 gi|239633996|gb|ACR84184.1| oxidase assembly 1-like protein [Lepus timidus]
 gi|239633998|gb|ACR84185.1| oxidase assembly 1-like protein [Lepus timidus]
          Length = 83

 Score = 41.9 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 23/97 (23%)

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDL 465
                M    K H+I  L      L Q P+F + +  +     +           W +DL
Sbjct: 2   KASSEMTLYQKKHDIKLLRPLILPLTQAPIFISFFIALREMANLPVPSLQTGGLWWFQDL 61

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
              DPT                    I P++++ +M+
Sbjct: 62  TVCDPTY-------------------ILPMVVTATMW 79


>gi|152975121|ref|YP_001374638.1| aldose 1-epimerase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152023873|gb|ABS21643.1| Aldose 1-epimerase [Bacillus cytotoxicus NVH 391-98]
          Length = 290

 Score = 41.9 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 62/226 (27%), Gaps = 10/226 (4%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     +N     +P++  +      + Y+ 
Sbjct: 4   TIQNEKVIVSISEKGAELQSIRLKEDNTEYLWQGDANYWGRRAPLLFPIVGRLVDHTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + E     
Sbjct: 64  DGTAYSLTQHGFARDLPFSIKEQSETTITYIVTSNAETLQKYPYEFELFVSYELEGQTLH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
           +   V N S  ++ FS       + P   + +F                  +   + K  
Sbjct: 124 VTYNVHNPSSQEMFFSIGAHPGFNCPLVESTSFTDYYLAFRGPEYLETSILEGPFLSKEK 183

Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
                 ++      D +     I     +     +           
Sbjct: 184 QLIVDHASELPLTYDLFKNDALIFENMNTNEIAIRSHKHNKFVKVT 229


>gi|328702388|ref|XP_001951979.2| PREDICTED: mitochondrial inner membrane protein COX18-like
           [Acyrthosiphon pisum]
          Length = 103

 Score = 41.9 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 23/55 (41%)

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563
           P    K    I   + ++ +      P+G+ +YW+ S++  + Q   ++     +
Sbjct: 20  PTRNQKIITNIFRGLTIIMMPLSCFLPSGVSLYWTASSIYGLSQNLFLLSPQVRK 74


>gi|50083799|ref|YP_045309.1| hypothetical protein ACIAD0563 [Acinetobacter sp. ADP1]
 gi|49529775|emb|CAG67487.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
          Length = 233

 Score = 41.9 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 35/112 (31%), Gaps = 6/112 (5%)

Query: 7   YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV----LIDDRA 62
               I +++I  + WQ +      E      K  Q + Q    + +  A+       D+ 
Sbjct: 24  IISGILIALIAFFGWQYWQKKTLAENQTRTAKVQQLIDQAQAAEANPDALNNLYAAADKI 83

Query: 63  QALSMSPRVELKNPSLIGSINLKGAQFDDLN--LRGYHLDVSSNSPIVTLLS 112
              +      ++   L+  I      +      L+       ++  +V L+ 
Sbjct: 84  VKDAPDSIQAVQTEFLLAKIAYDKGDYATAEKSLKKIENSKINDEGLVQLIK 135


>gi|332982122|ref|YP_004463563.1| peptidase S1 and S6 chymotrypsin/Hap [Mahella australiensis 50-1
          BON]
 gi|332699800|gb|AEE96741.1| peptidase S1 and S6 chymotrypsin/Hap [Mahella australiensis 50-1
          BON]
          Length = 379

 Score = 41.9 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 26/84 (30%), Gaps = 8/84 (9%)

Query: 1  MERNWNYFVAI------ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA 54
          M ++    + I      ALS I+   W   Y    ++   +  +   +    N +D    
Sbjct: 12 MLKSKRMTIFITALVSVALSFIVFTLWMG-YNKSPVQRPQSTAQEEASADDDNALDGVTP 70

Query: 55 AVLIDDRAQALSMSPRVELKNPSL 78
           V     A     + RV  +    
Sbjct: 71 IVRKAAPAVVGISTTRVT-ETDMF 93


>gi|325679510|ref|ZP_08159090.1| hypothetical protein CUS_5876 [Ruminococcus albus 8]
 gi|324108797|gb|EGC03033.1| hypothetical protein CUS_5876 [Ruminococcus albus 8]
          Length = 332

 Score = 41.9 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 31/99 (31%), Gaps = 12/99 (12%)

Query: 1   MERNWNYF-------VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53
           M  N N         + I L  +I+     + + P+  + ++ ++N Q+     +   S 
Sbjct: 9   MNDNRNDIAKASRFALGIILGAVILIGVIFYGIAPKTRKKDDTKQNTQSAPAAQKQTQSP 68

Query: 54  AAVL---IDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89
                  +++    +       +      G  +  G   
Sbjct: 69  PPQTEVPVEEEPLEIPQGHLYRVSTD--TGVTDKDGGYI 105


>gi|187933640|ref|YP_001887018.1| hypothetical protein CLL_A2831 [Clostridium botulinum B str. Eklund
           17B]
 gi|187721793|gb|ACD23014.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
           17B]
          Length = 345

 Score = 41.9 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/257 (8%), Positives = 72/257 (28%), Gaps = 14/257 (5%)

Query: 7   YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66
           +   + L+V+I+  +   Y +P+  E   + KNI++ +  ++V          D     +
Sbjct: 8   FVTFLILTVLIITLFFCIYYFPQQSEDIVQAKNIESNENYDKVHIDDDNSPSSDTENIET 67

Query: 67  MSPR-----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121
           + P      +++       +++      D+  L+  +    +    +      ++     
Sbjct: 68  VEPTRLTTGIKISEDLFKSTLS------DNEKLKILNDSKYNLEDRILFYLGYDSDR--- 118

Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181
               Y    +N  +  +     + +         +       +  L  + +   +    +
Sbjct: 119 VGFIYYDLNSNKYMELNKNNTFVAASTYKVKLNVLTYEKNKTDKDLLTKKLEYKDSDYEE 178

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241
               + N S            +         T  +          +  + + ++      
Sbjct: 179 GTGILQNLSDIPPTPISELLDLSIINSDNIATNMIGSYLGGHDQVRKEINEMFNISMPYD 238

Query: 242 ISNFHESNSWLGISDKY 258
            +       +  +   Y
Sbjct: 239 ENITTPETEFRILKHIY 255


>gi|253565165|ref|ZP_04842621.1| beta-galactosidase [Bacteroides sp. 3_2_5]
 gi|251946630|gb|EES87007.1| beta-galactosidase [Bacteroides sp. 3_2_5]
          Length = 1341

 Score = 41.9 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 25/237 (10%), Positives = 67/237 (28%), Gaps = 9/237 (3%)

Query: 28   PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA--LSMSPRVELKNPSLIGSINLK 85
            P  ++   + +    VK+     +        D+ +      S  + +K        ++K
Sbjct: 773  PWADKNFAQAEEQILVKEATARPSIATVAAEGDKPEVMMTKASDIITIKGNGYTAQFDIK 832

Query: 86   GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145
                  L      +    N P +  L      + +F             L +S T +N+ 
Sbjct: 833  TGTIYSLTYGNEKVITDGNGPKLDALRAFTNNDNWF--YSQWFDNGLHNLKHSATGFNMT 890

Query: 146  SGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH 205
            + +  T      +  +  N        S  ++ + ++ D    +S  +   +    + + 
Sbjct: 891  TKEDGTVVLSFTVQSQAPNAAKILGGTSSGKNKIEELTDKKFGSSDFKFTTNQVWTVYKD 950

Query: 206  KPQT-----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257
                      +N   +    +  +         ++   +  I N+ +      I   
Sbjct: 951  GSIELEASITSNQPSLVLPRLGYMVRVPQQYANFTYYGRGPIDNYADRKVGQFIEQH 1007


>gi|221063274|gb|ACL98473.1| mitochondrial translocase OXA1 [Chlamydomonas reinhardtii]
          Length = 237

 Score = 41.5 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 44/140 (31%), Gaps = 20/140 (14%)

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           KT  + P        + + +F  + K+++  +         W  DL + DP     L   
Sbjct: 33  KTALVVPGVMILNGAIFLSIFNGVSKLMAAKVPSLTTGGALWFSDLTSPDPYFGLPLMCT 92

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI-------LNWMPVVFVFALS 532
                     +     +   +        P P D+  A +       +  M  +F+ A  
Sbjct: 93  AVTLAMVEYGIN----LAGDA-------GPMPEDR--AKMTNGLKNFMRVMAFMFIPAGG 139

Query: 533 SFPAGLIIYWSWSNVISIVQ 552
              AG  + W  +    +VQ
Sbjct: 140 YVAAGTAVLWVSNTAFGVVQ 159


>gi|323348589|gb|EGA82833.1| Cox18p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 316

 Score = 41.5 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 15/168 (8%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465
           +  +K   +L+K +N+         ++QIP++  +   I    E +    +   W   L 
Sbjct: 146 KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 205

Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519
            ++ D   P     L   +       ++V +   +M  S      +     +    Q  +
Sbjct: 206 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAM 265

Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            + + V        +   S  P  L +YW  S + S+VQ  ++  ++ 
Sbjct: 266 TSILNVSRLGCVXMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 313


>gi|60682674|ref|YP_212818.1| putative exported beta-galactosidase [Bacteroides fragilis NCTC 9343]
 gi|60494108|emb|CAH08900.1| putative exported beta-galactosidase [Bacteroides fragilis NCTC 9343]
          Length = 1341

 Score = 41.5 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/237 (10%), Positives = 67/237 (28%), Gaps = 9/237 (3%)

Query: 28   PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA--LSMSPRVELKNPSLIGSINLK 85
            P  ++   + +    VK+     +        D+ +      S  + +K        ++K
Sbjct: 773  PWADKNFAQAEEQILVKEATARPSIATVAAEGDKPEVMMTKASDIITIKGNGYTAQFDIK 832

Query: 86   GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145
                  L      +    N P +  L      + +F             L +S T +N+ 
Sbjct: 833  TGTIYSLTYGNEKVITDGNGPKLDALRAFTNNDNWF--YSQWFDNGLHNLKHSATGFNMT 890

Query: 146  SGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH 205
            + +  T      +  +  N        S  ++ + ++ D    +S  +   +    + + 
Sbjct: 891  TKEDGTVVLSFTVQSQAPNAAKILGGTSSGKNKIEELTDKKFGSSDFKFTTNQVWTVYKD 950

Query: 206  KPQT-----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257
                      +N   +    +  +         ++   +  I N+ +      I   
Sbjct: 951  GSIELEASITSNQPSLVLPRLGYMVRVPQQYANFTYYGRGPIDNYADRKVGQFIEQH 1007


>gi|53714661|ref|YP_100653.1| beta-galactosidase [Bacteroides fragilis YCH46]
 gi|52217526|dbj|BAD50119.1| beta-galactosidase [Bacteroides fragilis YCH46]
          Length = 1341

 Score = 41.5 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/237 (10%), Positives = 67/237 (28%), Gaps = 9/237 (3%)

Query: 28   PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA--LSMSPRVELKNPSLIGSINLK 85
            P  ++   + +    VK+     +        D+ +      S  + +K        ++K
Sbjct: 773  PWADKNFAQAEEQILVKEATARPSIATVAAEGDKPEVMMTKASDIITIKGNGYTAQFDIK 832

Query: 86   GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145
                  L      +    N P +  L      + +F             L +S T +N+ 
Sbjct: 833  TGTIYSLTYGNEKVITDGNGPKLDALRAFTNNDNWF--YSQWFDNGLHNLKHSATGFNMT 890

Query: 146  SGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH 205
            + +  T      +  +  N        S  ++ + ++ D    +S  +   +    + + 
Sbjct: 891  TKEDGTVVLSFTVQSQAPNAAKILGGTSSGKNKIEELTDKKFGSSDFKFTTNQVWTVYKD 950

Query: 206  KPQT-----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257
                      +N   +    +  +         ++   +  I N+ +      I   
Sbjct: 951  GSIELEASITSNQPSLVLPRLGYMVRVPQQYANFTYYGRGPIDNYADRKVGQFIEQH 1007


>gi|265765877|ref|ZP_06093918.1| beta-galactosidase [Bacteroides sp. 2_1_16]
 gi|263253545|gb|EEZ25010.1| beta-galactosidase [Bacteroides sp. 2_1_16]
          Length = 1341

 Score = 41.5 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/237 (10%), Positives = 67/237 (28%), Gaps = 9/237 (3%)

Query: 28   PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA--LSMSPRVELKNPSLIGSINLK 85
            P  ++   + +    VK+     +        D+ +      S  + +K        ++K
Sbjct: 773  PWADKNFAQAEEQILVKEATARPSIATVAAEGDKPEVMMTKASDIITIKGNGYTAQFDIK 832

Query: 86   GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145
                  L      +    N P +  L      + +F             L +S T +N+ 
Sbjct: 833  TGTIYSLTYGNEKVITDGNGPKLDALRAFTNNDNWF--YSQWFDNGLHNLKHSATGFNMT 890

Query: 146  SGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH 205
            + +  T      +  +  N        S  ++ + ++ D    +S  +   +    + + 
Sbjct: 891  TKEDGTVVLSFTVQSQAPNAAKILGGTSSGKNKIEELTDKKFGSSDFKFTTNQVWTVYKD 950

Query: 206  KPQT-----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257
                      +N   +    +  +         ++   +  I N+ +      I   
Sbjct: 951  GSIELEASITSNQPSLVLPRLGYMVRVPQQYANFTYYGRGPIDNYADRKVGQFIEQH 1007


>gi|301164152|emb|CBW23708.1| putative exported beta-galactosidase [Bacteroides fragilis 638R]
          Length = 1341

 Score = 41.5 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 25/237 (10%), Positives = 67/237 (28%), Gaps = 9/237 (3%)

Query: 28   PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA--LSMSPRVELKNPSLIGSINLK 85
            P  ++   + +    VK+     +        D+ +      S  + +K        ++K
Sbjct: 773  PWADKNFAQAEEQILVKEATARPSIATVAAEGDKPEVMMTKASDIITIKGNGYTAQFDIK 832

Query: 86   GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145
                  L      +    N P +  L      + +F             L +S T +N+ 
Sbjct: 833  TGTIYSLTYGNEKVITDGNGPKLDALRAFTNNDNWF--YSQWFDNGLHNLKHSATGFNMT 890

Query: 146  SGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH 205
            + +  T      +  +  N        S  ++ + ++ D    +S  +   +    + + 
Sbjct: 891  TKEDGTVVLSFTVQSQAPNAAKILGGTSSGKNKIEELTDKKFGSSDFKFTTNQVWTVYKD 950

Query: 206  KPQT-----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257
                      +N   +    +  +         ++   +  I N+ +      I   
Sbjct: 951  GSIELEASITSNQPSLVLPRLGYMVRVPQQYANFTYYGRGPIDNYADRKVGQFIEQH 1007


>gi|289614483|emb|CBI58767.1| unnamed protein product [Sordaria macrospora]
          Length = 459

 Score = 41.5 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 54/175 (30%), Gaps = 59/175 (33%)

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           +NPLA  +        F      +  S+E        W  DL AADP +           
Sbjct: 275 VNPLANTYLPDSLSAYF---QNALPTSME-----GCLWFPDLMAADPLH----------- 315

Query: 484 LPGFMHVGIWPIIMSLSMFIQMK----------MSP---------------PPADKGQAM 518
                   I P I+S +MF+ +           ++P                   K Q  
Sbjct: 316 --------ILPFILSFTMFVNVMPRTREGWLRLLNPGTEVAEPNPHNIGDQASQIKVQKS 367

Query: 519 ILNWM-------PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566
           I   M        ++   A  + PA L +YW  +++ S    +V+         L
Sbjct: 368 IGLRMQRALLLLTLLVGPATFNLPAALHLYWITTSLTSNAITSVVAAKMPLPPSL 422


>gi|224128952|ref|XP_002329007.1| inner membrane protein [Populus trichocarpa]
 gi|222839241|gb|EEE77592.1| inner membrane protein [Populus trichocarpa]
          Length = 257

 Score = 41.5 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554
           I   +P    F     P G ++YW  ++  +++QQ 
Sbjct: 78  IFLTLP--MFFIGYCIPQGSLVYWVTNSSFTVIQQV 111


>gi|259146565|emb|CAY79822.1| Cox18p [Saccharomyces cerevisiae EC1118]
          Length = 316

 Score = 41.5 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 15/168 (8%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465
           +  +K   +L+K +N+         ++QIP++  +   I    E +    +   W   L 
Sbjct: 146 KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 205

Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519
            ++ D   P     L   +       ++V +   +M  S      +     +    Q  +
Sbjct: 206 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAM 265

Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            + + V        +   S  P  L +YW  S + S+VQ  ++  ++ 
Sbjct: 266 TSILNVSRLGCVGMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 313


>gi|229523758|ref|ZP_04413163.1| hypothetical protein VCA_001333 [Vibrio cholerae bv. albensis
           VL426]
 gi|229337339|gb|EEO02356.1| hypothetical protein VCA_001333 [Vibrio cholerae bv. albensis
           VL426]
          Length = 568

 Score = 41.5 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 25/222 (11%), Positives = 69/222 (31%), Gaps = 6/222 (2%)

Query: 5   WNYFVA--IALSVIIVYAWQNFYVYPRIEEMNN----ERKNIQTVKQPNQVDNSYAAVLI 58
               +   I L V +++++  F+     E+               K     +N+Y    +
Sbjct: 2   KKIIILYTIGLLVSLIFSYYFFFNNHNQEKHQQGLYYTESYDSVTKNKKADENAYKTYDV 61

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
              +  ++ + ++  +  +    ++       D  +       +S+   + L      KN
Sbjct: 62  KLTSTLINGTEKINQQLDNFKMKLHFSDGIIQDGTVYDITTSETSDEIPIYLPFTYKYKN 121

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
             F ++  +  + + +L    T+ N  S    T    +   +     I  E    +    
Sbjct: 122 GLFQDISLLDLSPDHKLNLIQTILNDFSYSTSTDEVVLNSAYMERKYIYNENAKQVTRKK 181

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220
           +        ++ +++             P+  T+ F  +  F
Sbjct: 182 IIVTDHNDNSDILNEHENWLLSLNDDGTPRDLTSYFYKEINF 223


>gi|82596510|ref|XP_726290.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23481641|gb|EAA17855.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 184

 Score = 41.5 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 47/149 (31%), Gaps = 28/149 (18%)

Query: 432 PILLQIPVFFAIYKV---ISISLEMRHAPFW---GWIKDLAAADPTNIFTLFGILPFYLP 485
            + LQ P+FF  Y     I+   E+     +    W+  L+  DP  I  +   L     
Sbjct: 1   MVFLQTPLFFVFYFSMKKIASYPEIFKEFTFESPLWLDSLSLPDPYCILPILSSLLLLSN 60

Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKG---QAMI-------LNWMPVVFVFALSSFP 535
             +   I   I           +P   D     Q  I       +    +       S P
Sbjct: 61  HELTALIDKHI--------TNNNPNKYDDESEFQKNIKKISKIAMRVFYISSALFFKSMP 112

Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
           +GL IY+  +       Q  I ++   +I
Sbjct: 113 SGLFIYFITNTFF----QLFITQICKVKI 137


>gi|229084696|ref|ZP_04216963.1| hypothetical protein bcere0022_13300 [Bacillus cereus Rock3-44]
 gi|228698652|gb|EEL51370.1| hypothetical protein bcere0022_13300 [Bacillus cereus Rock3-44]
          Length = 290

 Score = 41.1 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 30/228 (13%), Positives = 60/228 (26%), Gaps = 10/228 (4%)

Query: 70  RVELKNPSLIGSINLKGAQFDDLNLR----GY-----HLDVSSNSPIVTLLSPSNTKNAY 120
              ++N  +I SI+ +GA+   + L+     Y            +PI+  +      N Y
Sbjct: 2   TTTIQNEKVIVSISEQGAELQSIRLKEDNTEYLWQGDKKYWGRRAPILFPIVGRLVNNTY 61

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179
           + +    S   +    +        S   +T                FE  +S + +   
Sbjct: 62  YVDDKPYSLTQHGFARDLTFAVTEQSETKITYAVTSNSETLQNYPYEFELRVSYELDEQN 121

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
             +   V N++  ++ FS       + P     +F         L        K   + K
Sbjct: 122 IHVTYEVHNSNSTEMFFSIGAHPGFNCPLVEGESFTDYHLSFNGLEHLETSILKGPFLSK 181

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287
                           D +     I     +     +          A
Sbjct: 182 EKQLIVENKAELPLTYDLFKNDALIFENMNTNEIAIRSHKHNKFVKVA 229


>gi|190406915|gb|EDV10182.1| inner membrane protein COX18, mitochondrial precursor
           [Saccharomyces cerevisiae RM11-1a]
          Length = 316

 Score = 41.1 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465
           +  +K   +L+K +N+         ++QIP++  +   I    E +    +   W   L 
Sbjct: 146 KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 205

Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519
            ++ D   P     L   +       ++V +   +M  S      +     +    Q  +
Sbjct: 206 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAL 265

Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561
            + + V      V +   S  P  L +YW  S + S+VQ  ++  ++ 
Sbjct: 266 TSILNVSRLGCVVMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 313


>gi|291523549|emb|CBK81842.1| Galactose mutarotase and related enzymes [Coprococcus catus GD/7]
          Length = 295

 Score = 41.1 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 43/158 (27%), Gaps = 10/158 (6%)

Query: 70  RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI-------VTLLSPSNTKNA--Y 120
           R +++N  L+ +I+  GA+   +  + Y  ++               L           Y
Sbjct: 3   RFKMENDRLVVTIDDLGAELVSIYDKKYSRELIWQGDPAWWKRQAPILFPNVGKFYGGEY 62

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179
             +  +     +    +        S   +T         +      FE  I+   +   
Sbjct: 63  LYQGRHYVQDQHGFARDYVLERVEESPASVTHRLVSNAETRKVYPFDFELMITHRLDGDK 122

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
             I   V N     + F+  G    + P      +   
Sbjct: 123 VDIQWQVKNIGDHPMHFTIGGHPGFNVPVLPDTEYSDY 160


>gi|302534658|ref|ZP_07287000.1| predicted protein [Streptomyces sp. C]
 gi|302443553|gb|EFL15369.1| predicted protein [Streptomyces sp. C]
          Length = 217

 Score = 41.1 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 55/160 (34%), Gaps = 35/160 (21%)

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           GC P+LLQ+PVF+ +Y+  S   E+       +   L A        L    PF   G +
Sbjct: 55  GCLPMLLQLPVFYLMYQSFSSGGELLG--HRLFAAPLGAR---WTGALEEGGPFGAQGLV 109

Query: 489 HVGIWPIIMSLSMF--------------------------IQMKMSPPPADKGQAMILNW 522
            +G++ +I  ++ +                           Q  +S    +     +   
Sbjct: 110 FLGLFAVIAVVAAWSAVRGRRAAAAAPVPVPVPVAGKGKGAQPALSAEQVEAM-RKVGGV 168

Query: 523 MPVVFV---FALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559
           +P++        +  P    +Y   +   S+ ++A +   
Sbjct: 169 LPLLSFGTLVTAAVVPLAAGLYLLTTTAWSVGERAWLQHR 208


>gi|256397362|ref|YP_003118926.1| phosphate ABC transporter inner membrane subunit PstC
           [Catenulispora acidiphila DSM 44928]
 gi|256363588|gb|ACU77085.1| phosphate ABC transporter, inner membrane subunit PstC
           [Catenulispora acidiphila DSM 44928]
          Length = 694

 Score = 41.1 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 15/87 (17%)

Query: 427 LAGCWPILLQIP-VFFAIYKVISISLEMRHAPFW-----GWIKDLAAADPTNIFTLFGIL 480
           L     +L  +P + + ++ ++ +   M+ A  +     GWI       P     +FG  
Sbjct: 130 LGYIVDLLAAVPSIVYGLWGILFLVPHMQGASQFVSDVLGWI-------PMFSSGIFGRS 182

Query: 481 PFYLPGFMHVGIWPIIMSLS--MFIQM 505
            F     + + I PII ++S  +F+Q 
Sbjct: 183 VFTAGVILAIMILPIIAAISREVFLQT 209


>gi|159482252|ref|XP_001699185.1| cytochrome c oxidase assembly factor [Chlamydomonas reinhardtii]
 gi|158273032|gb|EDO98825.1| cytochrome c oxidase assembly factor [Chlamydomonas reinhardtii]
          Length = 178

 Score = 41.1 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 44/140 (31%), Gaps = 20/140 (14%)

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479
           KT  + P        + + +F  + K+++  +         W  DL + DP     L   
Sbjct: 33  KTALVVPGVMILNGAIFLSIFNGVSKLMAAKVPSLTTGGALWFSDLTSPDPYFGLPLMCT 92

Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI-------LNWMPVVFVFALS 532
                     +     +   +        P P D+  A +       +  M  +F+ A  
Sbjct: 93  AVTLAMVEYGIN----LAGDA-------GPMPEDR--AKMTNGLKNFMRVMAFMFIPAGG 139

Query: 533 SFPAGLIIYWSWSNVISIVQ 552
              AG  + W  +    +VQ
Sbjct: 140 YVAAGTAVLWVSNTAFGVVQ 159


>gi|239633962|gb|ACR84167.1| oxidase assembly 1-like protein [Lepus granatensis]
          Length = 83

 Score = 41.1 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 23/97 (23%)

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDL 465
                M    K H+I  L      L Q P+F   +  +     +           W +DL
Sbjct: 2   KASSEMTLYQKKHDIKLLRPLILPLTQAPIFIXFFIALREMANLPVPSLQTGGLWWFQDL 61

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
              DPT                    I P++++ +M+
Sbjct: 62  TVCDPTY-------------------ILPMVVTATMW 79


>gi|326430684|gb|EGD76254.1| hypothetical protein PTSG_00956 [Salpingoeca sp. ATCC 50818]
          Length = 1188

 Score = 40.7 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 19/28 (67%)

Query: 525  VVFVFALSSFPAGLIIYWSWSNVISIVQ 552
            V+ +   ++ P+GL++YW  S+  ++VQ
Sbjct: 1104 VLMLPIYAALPSGLVLYWFVSSASTVVQ 1131


>gi|281210573|gb|EFA84739.1| glycosyltransferase [Polysphondylium pallidum PN500]
          Length = 977

 Score = 40.7 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 25/219 (11%), Positives = 79/219 (36%), Gaps = 12/219 (5%)

Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381
                IP+ E+     +   +   +  ++  ++  + +  + +    +F K+L   +   
Sbjct: 704 ADQQGIPQSEIAFILFFLALLIFSIVSIVFLWHRNLESKVMKLFSIVLFFKILALFVCLI 763

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
            +      ++    I+            +    ++ + +   I+P  G     +   + F
Sbjct: 764 YWAMFLRYESGHKDINLAGTSLDLIARALFILLLLLVGQGWTISPFYGNVVSRVINVIMF 823

Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501
            +  V+S+++ +   P   ++   +        T+ G +   L  F+ + IW I++  + 
Sbjct: 824 VVILVMSVAIYL--VPNVTFMP--SKMYTFFYDTIPGYI--LLAFFLTIMIWFIVLCRNS 877

Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
           +++        D  +     +  ++F F     P  +++
Sbjct: 878 YVKQ------VDIVKKKFFLYFGLIFTFWFLMMPVSVLV 910


>gi|255010865|ref|ZP_05282991.1| putative exported beta-galactosidase [Bacteroides fragilis 3_1_12]
 gi|313148667|ref|ZP_07810860.1| beta-galactosidase [Bacteroides fragilis 3_1_12]
 gi|313137434|gb|EFR54794.1| beta-galactosidase [Bacteroides fragilis 3_1_12]
          Length = 1341

 Score = 40.7 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 22/230 (9%), Positives = 63/230 (27%), Gaps = 7/230 (3%)

Query: 33   MNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92
               E + +          N+ A+         +  S  + +K        ++K      L
Sbjct: 780  AQAEEQILVKEATARPAINTVASGSDKPEIIMIKASDIITIKGNGYTAQFDIKTGTIYSL 839

Query: 93   NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152
                  +    N P +  L      + +F             L +S T +++ + +  T 
Sbjct: 840  TYGNEKVITDGNGPKLDALRAFTNNDNWF--YSQWFDNGLHNLKHSATGFDMTTKEDGTV 897

Query: 153  TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT--- 209
                 +  +  N        S  ++ + ++ D    ++  +   +    + +        
Sbjct: 898  VLSFTVKSQAPNAAKILGGTSSGKNKIEELTDKKFGSNDFKFTTNQVWTVYKDGSIELEA 957

Query: 210  --ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257
               +N   +    +  +         ++   +  I N+ +      I   
Sbjct: 958  SITSNQPSLVLPRLGYMIRVPQQYDNFTYYGRGPIDNYADRKVGQFIEQH 1007


>gi|258563542|ref|XP_002582516.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237908023|gb|EEP82424.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 437

 Score = 40.7 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 25/213 (11%), Positives = 53/213 (24%), Gaps = 18/213 (8%)

Query: 12  ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRV 71
           AL+  +  AW      P             T   P     + A V  +  +   +     
Sbjct: 5   ALTRALWLAWVVSAQPPPPSANATVPAPGPTGTSP-----APAPVPTEPPSNGSASLEVF 59

Query: 72  ELKNPSLIGSINLKGAQFDDLNLRG----YHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127
            +   ++  S    GA+   L +          V         ++ + + NAY   +   
Sbjct: 60  TISANNITASFIPYGARLTSLLVPDRSGQQQDIVVGFDDPAQYVANAASNNAYIGPVVGR 119

Query: 128 STA---------NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
                       + +     +  +N             +  +   +      T +L +  
Sbjct: 120 YANRIKNSTFVLDGVTYHIPSNEFNKTQTVHGGVVGYDQRNWIVTDYTTNSITFALFDRG 179

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
                  V N +   +  S        + Q  T
Sbjct: 180 FENFPGDVINLATYTVNSSWSANNSDFQTQLTT 212


>gi|291534320|emb|CBL07432.1| Galactose mutarotase and related enzymes [Roseburia intestinalis
           M50/1]
          Length = 302

 Score = 40.7 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 27/236 (11%), Positives = 59/236 (25%), Gaps = 11/236 (4%)

Query: 70  RVELKNPSLIGSINLKGAQFDDLNLR----GY-----HLDVSSNSPIVTLLSPSNTKNAY 120
           R  L+N +L   I+  GA+   +  +     Y            SP++     +     Y
Sbjct: 12  RYTLENENLKVEIDSFGAEIKSVKRKSDNFEYMWCGDKKYWGRTSPVLFPFVGAPKNKEY 71

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179
             +    +   +    +        + + ++                F   IS +     
Sbjct: 72  RYDGKTYTMGQHGFARDMEFTLEAQTEENISFVLTDTAETCEKYPFHFALHISYELCKNE 131

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKP-QTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
            K+  TV N    ++ FS       + P     N  G    F  +             + 
Sbjct: 132 VKVNWTVENTDTKELYFSIGAHPAFNCPVHGEENKTGYGLKFGGLADTIHHHGNTPDGMA 191

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
                     +  +  ++ ++       +            +G      KF     
Sbjct: 192 VMEDKVLALKDGCVTFTEGFFDECTYMVEGKQTGEVSLLDREGIPYVTVKFDTPLF 247


>gi|255024311|ref|ZP_05296297.1| OxaA-like protein precursor [Listeria monocytogenes FSL J1-208]
          Length = 59

 Score = 40.7 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 21/49 (42%), Gaps = 3/49 (6%)

Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE---IGLIDRLRSTFS 575
              + P+ L +YW+   +    Q  +  K++  +   I ++++    F 
Sbjct: 1   VSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHPEIKVMEQEEKEFE 49


>gi|167752631|ref|ZP_02424758.1| hypothetical protein ALIPUT_00886 [Alistipes putredinis DSM 17216]
 gi|167659700|gb|EDS03830.1| hypothetical protein ALIPUT_00886 [Alistipes putredinis DSM 17216]
          Length = 209

 Score = 40.7 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 31/99 (31%), Gaps = 7/99 (7%)

Query: 3   RNWNYFVAIALSVIIV-YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
            N    + I L  +++   W      P   +      N    +Q    +++   +     
Sbjct: 8   NNKRLILMIVLLAVVIALMWLL----PDGSQPAAPATNAPKTEQTKNTNDAPDDIEATTL 63

Query: 62  AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100
            +A + +P   ++     G+    G+    + L  +   
Sbjct: 64  VKAGTQAPDFRVE--MFDGTTFTLGSLRGKVVLLNFWAT 100


>gi|261206312|ref|XP_002627893.1| mitochondrial export translocase [Ajellomyces dermatitidis
           SLH14081]
 gi|239592952|gb|EEQ75533.1| mitochondrial export translocase [Ajellomyces dermatitidis
           SLH14081]
 gi|239610873|gb|EEQ87860.1| mitochondrial export translocase [Ajellomyces dermatitidis ER-3]
          Length = 367

 Score = 40.7 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 55/178 (30%), Gaps = 45/178 (25%)

Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488
           G   IL Q      +   + +   +       W  DL AADP                  
Sbjct: 198 GLLVILQQWFNPNGVKAQVPVESSLSTEGA-LWFPDLMAADP------------------ 238

Query: 489 HVGIWPIIMSLSMFIQ----MKMSPPPADKG-------QA-------MILNWMPVVFVFA 530
            +G+ P+ +S+ MFI      K++              Q         I   M +    A
Sbjct: 239 -LGVLPVAISVLMFIHITWGSKINKMKDIPKLVALGNLQGVFSWAIHRIFQAMSIWIAPA 297

Query: 531 LS--SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI-----GLIDRLRSTFSKNYNSQ 581
           L     PA L IYW  +  ++IVQ  ++                  +R  + +   +Q
Sbjct: 298 LLYSQAPAALCIYWLSTTCVAIVQSRLLQMYMPTPNIPMPCRKRTIVRFMYERKPGTQ 355


>gi|309362417|emb|CAP28248.2| hypothetical protein CBG_08423 [Caenorhabditis briggsae AF16]
          Length = 311

 Score = 40.4 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 81/264 (30%), Gaps = 59/264 (22%)

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
           P       +    +I + + M M   + L  ++ +A +   V +++   PL        A
Sbjct: 33  PAIAPAFQYASDCYITQSIQMGMEGLHELGLSWPVAFVSAAVLLRVGTAPLHVYAEKLFA 92

Query: 388 NMKNIQ--------------------PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427
              + Q                    P  D  + + K S P++ +     L +  ++   
Sbjct: 93  ERLHAQNFLTRGILKKVSERYRVELGPSKDGSKLEVKTSDPKIAKVTQDALQEVPSMLAE 152

Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHA---------PFWGWIKDLAAADPTNIFTLFG 478
            G     +Q      +   I  S  +R+              WI D+ A DP        
Sbjct: 153 HGLQAARIQNLKMCTVPIWIFSSFALRNVINSDFHPSVAGALWIPDMLAPDPYF------ 206

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFI----QMKMSPPPADKGQAM-----ILNWMPVVFVF 529
                        + P+ + +  F+    Q K+ P              +L +   +F  
Sbjct: 207 -------------VLPVAVGVFGFLNLYSQRKIYPGVIKTTMKQKSYDAVLAFFT-MFAV 252

Query: 530 -ALSSFPAGLIIYWSWSNVISIVQ 552
             ++  PA + +YW   +   + Q
Sbjct: 253 TIMAQLPACIPLYWLMVSTTGMAQ 276


>gi|67539108|ref|XP_663328.1| hypothetical protein AN5724.2 [Aspergillus nidulans FGSC A4]
 gi|40743627|gb|EAA62817.1| hypothetical protein AN5724.2 [Aspergillus nidulans FGSC A4]
 gi|259484799|tpe|CBF81330.1| TPA: mitochondrial export translocase Oxa2, putative
           (AFU_orthologue; AFUA_1G06880) [Aspergillus nidulans
           FGSC A4]
          Length = 329

 Score = 40.4 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 49/155 (31%), Gaps = 42/155 (27%)

Query: 446 VISISLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504
            + +++E    A    W  DL A+D T                   GI P I++++M + 
Sbjct: 186 ALRLTVEPSFAAEGALWFPDLLASDST-------------------GILPAILTVTMLVN 226

Query: 505 MK-------MSPPPADK--GQAMIL-----------NWMPVVFVFALSSFPAGLIIYWSW 544
           ++       +              +             + V     +   P  ++IYW  
Sbjct: 227 IRNGWKVPTLRSAADLPLKEMGKQMSNTLFRLLIQCMALNVGLACYMQGMPVAVMIYWIT 286

Query: 545 SNVISIVQQAVIMKMHGAEIGL--IDRLRSTFSKN 577
           S  I+  Q  ++ K       L    ++   +SK 
Sbjct: 287 STNIATAQTYLLQKYMFPTPSLKPWRQIHIAYSKR 321


>gi|312073698|ref|XP_003139637.1| hypothetical protein LOAG_04052 [Loa loa]
 gi|307765202|gb|EFO24436.1| hypothetical protein LOAG_04052 [Loa loa]
          Length = 393

 Score = 40.4 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 12/96 (12%)

Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515
           A       DL   DP  +      + F       +    +  ++S ++   +   P +  
Sbjct: 165 ASGTLSFIDLTVPDPAFLLPTLTAICFTFAIKRWIETLQVEKAVSSWM---LGLKPDNA- 220

Query: 516 QAMILNWMPVV--FVFALSSFPAGLIIYWSWSNVIS 549
                   P+    +   S+ P+ + +YW  S++IS
Sbjct: 221 ------IYPIAACSLLVASNVPSVVCVYWITSSLIS 250


>gi|149033750|gb|EDL88546.1| similar to hypothetical protein FLJ38991 (predicted), isoform CRA_d
           [Rattus norvegicus]
          Length = 272

 Score = 40.4 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 20/32 (62%)

Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556
           V+ V   ++ P+ L++YW  S+++ + Q  ++
Sbjct: 203 VLMVPVAATVPSALVLYWLCSSLMGLSQNLLL 234


>gi|289806613|ref|ZP_06537242.1| putative inner membrane protein translocase component YidC
           [Salmonella enterica subsp. enterica serovar Typhi str.
           AG3]
          Length = 110

 Score = 40.4 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 23/61 (37%)

Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274
               G      D+   + K+  I  +   N      W+ +  +Y+A+ +IP  + + +  
Sbjct: 26  HTFRGAAYSTPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNNFY 85

Query: 275 F 275
            
Sbjct: 86  T 86


>gi|213648781|ref|ZP_03378834.1| putative inner membrane protein translocase component YidC
          [Salmonella enterica subsp. enterica serovar Typhi str.
          J185]
          Length = 72

 Score = 40.4 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 10/82 (12%)

Query: 1  MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
          M+   N  V IAL  +    WQ +           ++      +Q  Q   + A    D 
Sbjct: 1  MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50

Query: 61 RAQALSMSPRVELKNPSLIGSI 82
             A      + +K   L  +I
Sbjct: 51 GVPASGQGKMITVKTDVLDLTI 72


>gi|207093711|ref|ZP_03241498.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori HPKX_438_AG0C1]
          Length = 41

 Score = 40.4 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 20/31 (64%), Positives = 24/31 (77%)

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
           YK H  NPL GC P++LQIPVFFAIY+V+  
Sbjct: 11  YKKHGANPLGGCLPLILQIPVFFAIYRVLYN 41


>gi|312873628|ref|ZP_07733675.1| aldose 1-epimerase [Lactobacillus iners LEAF 2052A-d]
 gi|311090881|gb|EFQ49278.1| aldose 1-epimerase [Lactobacillus iners LEAF 2052A-d]
          Length = 290

 Score = 40.4 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 45/163 (27%), Gaps = 10/163 (6%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119
            +V ++N  L   + L GA+  ++  L+       Y            L      + +N 
Sbjct: 2   EQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178
           Y  +    +   +  L +            L          K      +  TI+   E  
Sbjct: 62  YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEETKLVYPYSYTVTITYTLEDT 121

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
              I   + NN    + +S       +     +N     E  +
Sbjct: 122 YLHINYEIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEPKL 164


>gi|237732773|ref|ZP_04563254.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|229384143|gb|EEO34234.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 1739

 Score = 40.4 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 25/233 (10%), Positives = 57/233 (24%), Gaps = 19/233 (8%)

Query: 8   FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67
            +A  L V+++       +Y   E    E     T  +  + +N  + +  +      S 
Sbjct: 4   ILAFFLVVVVLLGSTQLTIYADNESQGQEITTSVTNGESTKNENDSSMITNEKTVNNEST 63

Query: 68  SP---------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
           SP               ++ +       +I+   AQ  ++  + Y  ++ S      +  
Sbjct: 64  SPEKTADVKNSSITGKVKLIINTQYFKKNISTLSAQLANIE-QTYTGELDSTKENSQIFE 122

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
             N  N  +         +  E  +   V N     +    T         N        
Sbjct: 123 FKNIVNGTY---TLTIQGDGYETVSKEVVVNNNETTVKYVNTNSVADNIEGNGFGTFAYG 179

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
             ++       D    ++      S    +                 +     
Sbjct: 180 DFNKDGKIDSKDKKILSTAIFNNDSSNSLLDIDDNNKIDLLDLHTFTYAYSDN 232


>gi|167754747|ref|ZP_02426874.1| hypothetical protein CLORAM_00251 [Clostridium ramosum DSM 1402]
 gi|167705579|gb|EDS20158.1| hypothetical protein CLORAM_00251 [Clostridium ramosum DSM 1402]
          Length = 1739

 Score = 40.4 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 25/233 (10%), Positives = 57/233 (24%), Gaps = 19/233 (8%)

Query: 8   FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67
            +A  L V+++       +Y   E    E     T  +  + +N  + +  +      S 
Sbjct: 4   ILAFFLVVVVLLGSTQLTIYADNESQGQEITTSVTNGESTKNENDSSMITNEKTVNNEST 63

Query: 68  SP---------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112
           SP               ++ +       +I+   AQ  ++  + Y  ++ S      +  
Sbjct: 64  SPEKTADVKNSSITGKVKLIINTQYFKKNISTLSAQLANIE-QTYTGELDSTKENSQIFE 122

Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172
             N  N  +         +  E  +   V N     +    T         N        
Sbjct: 123 FKNIVNGTY---TLTIQGDGYETVSKEVVVNNNETTVKYVNTNSVADNIEGNGFGTFAYG 179

Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225
             ++       D    ++      S    +                 +     
Sbjct: 180 DFNKDGKIDSKDKKILSTAIFNNDSSNSLLDIDDNNKIDLLDLHTFTYAYSDN 232


>gi|297818904|ref|XP_002877335.1| hypothetical protein ARALYDRAFT_905549 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323173|gb|EFH53594.1| hypothetical protein ARALYDRAFT_905549 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 338

 Score = 40.0 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557
            M LN++           P G ++YW+ +   SI QQ+++ 
Sbjct: 67  KMFLNFLTFALYGLSFQMPQGSLLYWATNLSFSIAQQSILN 107


>gi|255714018|ref|XP_002553291.1| KLTH0D13376p [Lachancea thermotolerans]
 gi|238934671|emb|CAR22853.1| KLTH0D13376p [Lachancea thermotolerans]
          Length = 322

 Score = 40.0 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 61/177 (34%), Gaps = 34/177 (19%)

Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468
           +  +    +++    +         L+QIP++ ++   +    + R         +L  A
Sbjct: 143 KETRSRQKKMFGESKVQLWKNALLPLVQIPLWVSVSMGLRELTKQR-----LVDSNLTHA 197

Query: 469 DPTNIFTLFGILPFYLPGFMHVGI--WPI-------------------IMSLSMFIQM-- 505
           +P         +       + + +   PI                   +M+ +    M  
Sbjct: 198 NPLQNIDSLDYVSRISSLDLSLPLDGLPILAPLLLGTLALLNVEHNGRVMTTTTSETMGI 257

Query: 506 KMSPPPADKGQAMILNWMPVV----FVFALSSFPAGLII--YWSWSNVISIVQQAVI 556
           K++P P+ K    + + + V       F   S  A L++  YW  S + S+VQ  ++
Sbjct: 258 KLAPNPSSKVSQSMQSILNVSRLSCIFFMGVSSQAPLLLSAYWISSQLYSLVQNLLL 314


>gi|13938189|gb|AAH07213.1| ZDHHC6 protein [Homo sapiens]
 gi|16924296|gb|AAH17434.1| ZDHHC6 protein [Homo sapiens]
 gi|119569914|gb|EAW49529.1| zinc finger, DHHC-type containing 6, isoform CRA_c [Homo sapiens]
 gi|325463157|gb|ADZ15349.1| zinc finger, DHHC-type containing 6 [synthetic construct]
          Length = 409

 Score = 40.0 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 60/179 (33%), Gaps = 11/179 (6%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
                +    ML+++   ++ N+  A+ +   FV  L +             +  +    
Sbjct: 50  HTTGGSVNFIMLINWTVMILYNYFNAMFVGPGFV-PLGWKPDTMYLQYCKVCQAYKAPRS 108

Query: 398 ELREKFKQSPPQVLQK--AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455
               K  +   ++      +       N         +     +  A   V+++  ++ H
Sbjct: 109 HHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFVMTMYTQLYH 168

Query: 456 APFWGWIK---DLAAA--DPTNIFTLFGILPFYLPGFMHVGIW--PIIMSLSMFIQMKM 507
              +GW     D++AA  DP  I   FG+  F    F         I + +  FIQMK+
Sbjct: 169 RLSFGWNTVKIDMSAARRDPLPIVP-FGLAAFATTLFALGLALGTTIAVGMLFFIQMKI 226


>gi|309803538|ref|ZP_07697631.1| aldose 1-epimerase [Lactobacillus iners LactinV 11V1-d]
 gi|308164422|gb|EFO66676.1| aldose 1-epimerase [Lactobacillus iners LactinV 11V1-d]
          Length = 290

 Score = 40.0 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 44/161 (27%), Gaps = 10/161 (6%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119
            +V ++N  L   + L GA+  ++  L+       Y            L      + +N 
Sbjct: 2   EQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178
           Y  +    +   +  L +            L          K      +  TI+   E  
Sbjct: 62  YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEETKLVYPYSYTVTITYTLEDT 121

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
              I   + NN    + +S       +     +N     E 
Sbjct: 122 YLHINYEIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEP 162


>gi|259501380|ref|ZP_05744282.1| aldose epimerase [Lactobacillus iners DSM 13335]
 gi|302190900|ref|ZP_07267154.1| galactose mutarotase-like enzyme [Lactobacillus iners AB-1]
 gi|259167233|gb|EEW51728.1| aldose epimerase [Lactobacillus iners DSM 13335]
          Length = 290

 Score = 40.0 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 45/163 (27%), Gaps = 10/163 (6%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119
            +V ++N  L   + L GA+  ++  L+       Y            L      + +N 
Sbjct: 2   KQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178
           Y  +    +   +  L +            L          K      +  TI+   E  
Sbjct: 62  YLIDGKEYNMKQHGFLRDRVFKIVDKQKNKLVLQHSATEETKLVYPYSYTVTITYTLEDT 121

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
              I   + NN    + +S       +     +N     E  +
Sbjct: 122 YLHINYEIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEPKL 164


>gi|312872142|ref|ZP_07732215.1| aldose 1-epimerase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092226|gb|EFQ50597.1| aldose 1-epimerase [Lactobacillus iners LEAF 2062A-h1]
          Length = 290

 Score = 40.0 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 45/163 (27%), Gaps = 10/163 (6%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119
            +V ++N  L   + L GA+  ++  L+       Y            L      + +N 
Sbjct: 2   EQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178
           Y  +    +   +  L +            L          K      +  TI+   E  
Sbjct: 62  YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEGTKLVYPYSYTVTITYTLEDT 121

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
              I   + NN    + +S       +     +N     E  +
Sbjct: 122 YLHINYEIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEPKL 164


>gi|327441708|dbj|BAK18073.1| Trk-type K+ transport systems, membrane component [Solibacillus
           silvestris StLB046]
          Length = 246

 Score = 40.0 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 12/105 (11%)

Query: 5   WN--YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
            N    + IAL++ +++A   ++V P  +E  +    I ++K          A      A
Sbjct: 8   KNGTLLLVIALAMALLFAVYYYFVKPVQDEEQSIHSEISSLKTEISALEETIATHQTQLA 67

Query: 63  QALSMSP--RVEL----KNPSLIGSI----NLKGAQFDDLNLRGY 97
           Q  +     R ++    +  +LI SI     L G++   +    Y
Sbjct: 68  QTSTNEFVLRKKVPASRELDALILSIEETEYLTGSRVQSIEFNNY 112


>gi|240144531|ref|ZP_04743132.1| aldose epimerase family protein [Roseburia intestinalis L1-82]
 gi|257203440|gb|EEV01725.1| aldose epimerase family protein [Roseburia intestinalis L1-82]
 gi|291538063|emb|CBL11174.1| Galactose mutarotase and related enzymes [Roseburia intestinalis
           XB6B4]
          Length = 302

 Score = 40.0 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/236 (11%), Positives = 58/236 (24%), Gaps = 11/236 (4%)

Query: 70  RVELKNPSLIGSINLKGAQFDDLNLR----GY-----HLDVSSNSPIVTLLSPSNTKNAY 120
           R  L+N +L   I+  GA+   +  +     Y            SP++     +     Y
Sbjct: 12  RYTLENENLKVEIDSFGAEIKSVKRKSDNFEYMWCGDKKYWGRTSPVLFPFVGAPKNKEY 71

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179
             +    +   +    +        + + ++                F   I  +     
Sbjct: 72  RYDGKTYTMGQHGFARDMEFTLEAQTEENISFVLTDTAETCEKYPFHFALHIGYELCKNE 131

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKP-QTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
            K+  TV N    ++ FS       + P     N  G    F  +             + 
Sbjct: 132 VKVNWTVENTDTKELYFSIGAHPAFNCPVHGEENKTGYGLKFGGLADTIHHHGNTPDGMA 191

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
                     +  +  ++ ++       +            +G      KF     
Sbjct: 192 VMEDKVLALKDGCVTFTEGFFDECTYMVEGKQTGEVSLLDREGIPYVTVKFDTPLF 247


>gi|110634954|ref|YP_675162.1| RND family efflux transporter MFP subunit [Mesorhizobium sp.
          BNC1]
 gi|110285938|gb|ABG63997.1| efflux transporter, RND family, MFP subunit [Chelativorans sp.
          BNC1]
          Length = 405

 Score = 40.0 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 7/81 (8%), Positives = 25/81 (30%), Gaps = 3/81 (3%)

Query: 5  WNYFVAIALSVII---VYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61
            + +A  L  ++   +  +  F      +     +    TV       +++   +    
Sbjct: 3  KRFIIAFVLVALVAGALVGFNIFRDRAIQQIFATMQAPTLTVSTSTVEPSTWRPSIEAIG 62

Query: 62 AQALSMSPRVELKNPSLIGSI 82
            A +    + ++   ++  I
Sbjct: 63 TMAAANGVDLTVETNGIVEEI 83


>gi|325912484|ref|ZP_08174875.1| aldose 1-epimerase [Lactobacillus iners UPII 60-B]
 gi|325478218|gb|EGC81339.1| aldose 1-epimerase [Lactobacillus iners UPII 60-B]
          Length = 290

 Score = 40.0 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 44/161 (27%), Gaps = 10/161 (6%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119
            +V ++N  L   + L GA+  ++  L+       Y            L      + +N 
Sbjct: 2   KQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178
           Y  +    +   +  L +            L          K      +  TI+   E  
Sbjct: 62  YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEETKLVYPYSYTVTITYTLEDT 121

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
              I   + NN    + +S       +     +N     E 
Sbjct: 122 YLHINYEIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEP 162


>gi|50882002|gb|AAT85571.1| lipase chaperone [Pseudomonas aeruginosa]
          Length = 340

 Score = 39.6 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 21/80 (26%), Gaps = 2/80 (2%)

Query: 5  WNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
              + I L+     AW  +    P  E           V  P       A         
Sbjct: 2  KKILLLIPLAFAASLAWFVWLEPSPAPETAPPASPQAGAVHAPPAASAGEAVPAPQVMPA 61

Query: 64 ALSMSPRVELKNPSLIGSIN 83
           ++  P    +  S+ GS +
Sbjct: 62 KVAPLPT-SFRGTSVDGSFS 80


>gi|11968053|ref|NP_071939.1| probable palmitoyltransferase ZDHHC6 [Homo sapiens]
 gi|114632873|ref|XP_508039.2| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
 gi|114632875|ref|XP_001147499.1| PREDICTED: probable palmitoyltransferase ZDHHC6 isoform 2 [Pan
           troglodytes]
 gi|114632877|ref|XP_001147573.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
 gi|297687386|ref|XP_002821194.1| PREDICTED: probable palmitoyltransferase ZDHHC6-like isoform 1
           [Pongo abelii]
 gi|297687388|ref|XP_002821195.1| PREDICTED: probable palmitoyltransferase ZDHHC6-like isoform 2
           [Pongo abelii]
 gi|28202106|sp|Q9H6R6|ZDHC6_HUMAN RecName: Full=Probable palmitoyltransferase ZDHHC6; AltName:
           Full=Transmembrane protein H4; AltName: Full=Zinc finger
           DHHC domain-containing protein 6; Short=DHHC-6; AltName:
           Full=Zinc finger protein 376
 gi|75042507|sp|Q5REH2|ZDHC6_PONAB RecName: Full=Probable palmitoyltransferase ZDHHC6; AltName:
           Full=Zinc finger DHHC domain-containing protein 6;
           Short=DHHC-6
 gi|18032261|gb|AAL56663.1|AF267740_1 transmembrane protein H4 [Homo sapiens]
 gi|10438174|dbj|BAB15187.1| unnamed protein product [Homo sapiens]
 gi|55726123|emb|CAH89835.1| hypothetical protein [Pongo abelii]
 gi|119569911|gb|EAW49526.1| zinc finger, DHHC-type containing 6, isoform CRA_a [Homo sapiens]
 gi|119569913|gb|EAW49528.1| zinc finger, DHHC-type containing 6, isoform CRA_a [Homo sapiens]
          Length = 413

 Score = 39.6 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 13/182 (7%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
                +    ML+++   ++ N+  A+ +   FV L + P   +  +     K  Q    
Sbjct: 50  HTTGGSVNFIMLINWTVMILYNYFNAMFVGPGFVPLGWKPEISQDTMYLQYCKVCQAYKA 109

Query: 398 ELREKFKQSPPQVLQKA-----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
                 ++    V++       +       N         +     +  A   V+++  +
Sbjct: 110 PRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFVMTMYTQ 169

Query: 453 MRHAPFWGWIK---DLAAA--DPTNIFTLFGILPFYLPGFMHVGIW--PIIMSLSMFIQM 505
           + H   +GW     D++AA  DP  I   FG+  F    F         I + +  FIQM
Sbjct: 170 LYHRLSFGWNTVKIDMSAARRDPLPIVP-FGLAAFATTLFALGLALGTTIAVGMLFFIQM 228

Query: 506 KM 507
           K+
Sbjct: 229 KI 230


>gi|312875756|ref|ZP_07735751.1| aldose 1-epimerase [Lactobacillus iners LEAF 2053A-b]
 gi|311088748|gb|EFQ47197.1| aldose 1-epimerase [Lactobacillus iners LEAF 2053A-b]
          Length = 290

 Score = 39.6 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 44/161 (27%), Gaps = 10/161 (6%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119
            +V ++N  L   + L GA+  ++  L+       Y            L      + +N 
Sbjct: 2   EQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRRAPVLFPFIGRSYENK 61

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178
           Y  +    +   +  L +            L          K      +  TI+   E  
Sbjct: 62  YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEETKLVYPYSYTVTITYTLEDT 121

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
              I   + NN    + +S       +     +N     E 
Sbjct: 122 YLHINYEIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEP 162


>gi|332212833|ref|XP_003255524.1| PREDICTED: probable palmitoyltransferase ZDHHC6 [Nomascus
           leucogenys]
          Length = 413

 Score = 39.6 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 13/182 (7%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
                +    ML+++   ++ N+  A+ +   FV L + P   +  +     K  Q    
Sbjct: 50  HTTGGSVNFIMLINWTVMILYNYFNAMFVGPGFVPLGWKPEISQDTMYLQYCKVCQAYKA 109

Query: 398 ELREKFKQSPPQVLQKA-----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
                 ++    V++       +       N         +     +  A   V+++  +
Sbjct: 110 PRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFVMTMYTQ 169

Query: 453 MRHAPFWGWIK---DLAAA--DPTNIFTLFGILPFYLPGFMHVGIW--PIIMSLSMFIQM 505
           + H   +GW     D++AA  DP  I   FG+  F    F         I + +  FIQM
Sbjct: 170 LYHRLSFGWNTVKIDMSAARRDPLPIVP-FGLAAFATTLFALGLALGTTIAVGMLFFIQM 228

Query: 506 KM 507
           K+
Sbjct: 229 KI 230


>gi|316976072|gb|EFV59416.1| putative NSFL1 cofactor p47 [Trichinella spiralis]
          Length = 771

 Score = 39.6 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 71/268 (26%), Gaps = 60/268 (22%)

Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIML 366
           ++  AK  P +    K         L  + +  F    M  L+   +          I  
Sbjct: 14  VYNNAKGRPMLVQLSKRSLSNEIISLHRFNFLPF--DVMQDLLISIHENCSLPWWACIAG 71

Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI---------- 416
            T+  K   FPL      ++A      P+I+++ +  +    +   +             
Sbjct: 72  CTILAKAATFPLMVISQRNSARCALAAPQIEKMLKDLQSKVDEEAFRYSWPTKRKNIVYR 131

Query: 417 --------QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM------------RHA 456
                   ++Y  ++ +P         Q P++  +   I    E              H 
Sbjct: 132 LNANRIVREIYSKYDFHPGRSYALAYAQFPLWITLSMSIRSIAEPSLLNEGTKTHLGMHE 191

Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--- 513
               W KDL   D T                      P+++ +  +   K+  P  +   
Sbjct: 192 GGLFWFKDLTIPDST-------------------LALPVLLGICNYAIFKLHMPVINKVT 232

Query: 514 KGQAMILNW-----MPVVFVFALSSFPA 536
                         M  V     +  P+
Sbjct: 233 PTMKSRAYIAFGICMSFVLPVISALTPS 260


>gi|146301602|ref|YP_001196193.1| TonB-dependent receptor [Flavobacterium johnsoniae UW101]
 gi|146156020|gb|ABQ06874.1| SusC-like TonB-dependent receptor [Flavobacterium johnsoniae UW101]
          Length = 1034

 Score = 39.6 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/307 (9%), Positives = 74/307 (24%), Gaps = 7/307 (2%)

Query: 49  VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108
              + A   I       S + R ++ N +L     L         L GY L+ + +S   
Sbjct: 425 SSANEATNPIALSEYNNSTTERFKI-NGNLFADFTLIKGLVFRTEL-GYDLNFAKSST-- 480

Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
              +P  T       L+      +     +   +   +  I        L+ + A    +
Sbjct: 481 --FAPKYTLGNVNELLNKSFKQQDQSYYWNIKNYLTYNKTISEKHNFTFLLGQEAQESRY 538

Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228
           E               T  N        +  G          +          +      
Sbjct: 539 EYLSGYRSGEFLNKNFTNLNIGDIDTAVNGNGSGRWSMTSYISRLNYSFSDRYSFSASIR 598

Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288
                              S  W   ++K++  +        F + +  + + +      
Sbjct: 599 ADASSNFGPNNKWGYFPSFSGGWTVSNEKFFEPLSNSINYLKFRAGYGTVGNQNIPANRY 658

Query: 289 FSANEITILPGKSITTTNFLFAGAK-EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347
            +   +   P   ++ T         ++ ++  +     +      +   + Y++     
Sbjct: 659 QTILSLLSSPFGGVSPTIDNLGNPNIKWESLKSFNTGFELAMLNNRVKLDFDYYVKNSSD 718

Query: 348 MLMSYFY 354
            L     
Sbjct: 719 FLTKQIN 725


>gi|187735503|ref|YP_001877615.1| glycoside hydrolase family 31 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425555|gb|ACD04834.1| glycoside hydrolase family 31 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 1311

 Score = 39.6 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 52/193 (26%), Gaps = 8/193 (4%)

Query: 44  KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103
            +P     + +      R         V +    +   IN K + F  +NL+ + + V  
Sbjct: 91  AEPEARILADSPRRPVSRLDVDQQGDAVVITTGKVRIEINKKTSLFKVINLKDHSVVVEQ 150

Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV------WNLISGKILTPTTPIK 157
            SP   L     T  +  A+ D       ++    +         N  S       +P  
Sbjct: 151 ASP--VLFGKGKTSFSLKAKPDEYFYGGGVQNGRFSHKGKVISIENQNSWTDGGVASPTP 208

Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
             +      +   T    ++      + + N S D+        +         + + + 
Sbjct: 209 FYWSTGGYGVMWHTFKKGQYDFGSREENLVNLSHDENYLDVFFMVSDGPVSLLRDFYQLT 268

Query: 218 EGFIAVLGDKSLV 230
              + +       
Sbjct: 269 GAPVLLPKFAFYQ 281


>gi|310658092|ref|YP_003935813.1| hypothetical protein CLOST_0782 [Clostridium sticklandii DSM 519]
 gi|308824870|emb|CBH20908.1| conserved exported protein of unknown function [Clostridium
          sticklandii]
          Length = 238

 Score = 39.6 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 8/77 (10%), Positives = 23/77 (29%), Gaps = 1/77 (1%)

Query: 1  MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
          M+   N  +AI L + ++  +      P         +     ++     +    V +++
Sbjct: 1  MKFKKNALLAIMLGISML-GFAGCSNAPAETTEEPAAQEEPAAQEEPAAPDQVGGVSLEN 59

Query: 61 RAQALSMSPRVELKNPS 77
                 +  V +    
Sbjct: 60 PILVDKEAKTVTVLTQV 76


>gi|99078581|ref|YP_611839.1| PEP-utilising enzyme, mobile region [Ruegeria sp. TM1040]
 gi|99035719|gb|ABF62577.1| PEP-utilising enzyme mobile region [Ruegeria sp. TM1040]
          Length = 1240

 Score = 39.6 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 19/146 (13%)

Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429
             ++L  P+A K       ++  +  ++ L+ +     P    +A+   Y  H + P+  
Sbjct: 325 ISRVLVLPIALKSESDQITLRRHKADLEALKTRLA-HDPMRKARAIRAFYAQHGLTPMRN 383

Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489
              +L    +   +      + E+     + WI DL A DP  I  +  +       ++ 
Sbjct: 384 MAALLFLPLMMLGLQAAERAAAEVAG--GFLWIADLGAPDPMWIAPV--LTCGLAGAYLV 439

Query: 490 VGI--------------WPIIMSLSM 501
           + I               P +  L+M
Sbjct: 440 LAIAKSRRAAFLWLVLGLPALFLLTM 465


>gi|224543114|ref|ZP_03683653.1| hypothetical protein CATMIT_02314 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523901|gb|EEF93006.1| hypothetical protein CATMIT_02314 [Catenibacterium mitsuokai DSM
           15897]
          Length = 262

 Score = 39.6 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 69/196 (35%), Gaps = 14/196 (7%)

Query: 9   VAIALSV-IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67
            A+AL    +   +Q ++ Y ++EE     + +  + +    +       + +    L+ 
Sbjct: 18  AAVALLGTAVFCGFQIYHHYAQVEEQTEAFEQMAELVEQAPEEAIPEDTPVSEGEDVLAK 77

Query: 68  SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP-----SNTKNAYFA 122
              + L+N  ++G I++ G +        Y +  + N+P   L        S+    Y  
Sbjct: 78  YNELYLQNEDMVGWISIAGTKL------NYPVMQTPNNPNFYLKHNFEKAYSDLGTPYIQ 131

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182
           E   +S ++N+ +   +                 K  ++    I F+      E+ +  +
Sbjct: 132 ENCNLSESDNLVIYGHHI--KGGKMFGALEDYKAKSFYEKHKTIQFDTLTEQGEYEIVAV 189

Query: 183 VDTVTNNSIDQIRFSP 198
             TV  +S     +  
Sbjct: 190 FKTVAYSSEGFRYYDF 205


>gi|229102293|ref|ZP_04233002.1| hypothetical protein bcere0019_14540 [Bacillus cereus Rock3-28]
 gi|228681194|gb|EEL35362.1| hypothetical protein bcere0019_14540 [Bacillus cereus Rock3-28]
          Length = 290

 Score = 39.6 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  IS + E     
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLISYEVEEQNIH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPASKEMFFSIGAHPGFNFPLLDGESFTDY 159


>gi|222150315|ref|YP_002559468.1| hypothetical protein MCCL_0065 [Macrococcus caseolyticus
          JCSC5402]
 gi|222119437|dbj|BAH16772.1| hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 175

 Score = 39.6 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 6/101 (5%)

Query: 1  MERNWNYFVAIALS---VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57
          M         I+L      I+  WQ  Y YP  E    + K I+     +  + +     
Sbjct: 1  MNNRKKLISFISLIVITAAIILLWQWNYQYP--ELSKADIKVIEGKHYKDTDELTRQITE 58

Query: 58 IDDRAQALSMSPRVELKNPSLIGSI-NLKGAQFDDLNLRGY 97
          +D++  A S +  + ++   L   I +    +  D+  + +
Sbjct: 59 LDNKQIASSATTSIVIEEKGLPLVILSSFSGERSDVTYKSF 99


>gi|118100946|ref|XP_417528.2| PREDICTED: similar to circadian clock protein PER3 [Gallus gallus]
          Length = 1137

 Score = 39.6 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 31/111 (27%), Gaps = 10/111 (9%)

Query: 68  SPRVELKNPSLIGSINLKGAQFDD-----LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122
           S R    N + +   +L   +         ++  Y   V  +S  V LL+P +    Y  
Sbjct: 110 SERTPKNNDTFVAVFSLLSGRIVHISEQAASILNYKKQVLESSRFVELLAPQDASVFYAH 169

Query: 123 ELD-----YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168
                   + + +    L     V +             ++ +       +
Sbjct: 170 TDQSHLPLWNTESQTASLYEYAQVKSFFCRIRGGKDQEQEMHWYPFRITPY 220


>gi|261884150|ref|ZP_06008189.1| putative inner membrane protein translocase component YidC
          [Campylobacter fetus subsp. venerealis str. Azul-94]
          Length = 89

 Score = 39.6 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 7/66 (10%), Positives = 20/66 (30%)

Query: 4  NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
               +A  +S++    +  F++  R  ++N      +          +    +    + 
Sbjct: 8  QKRLLIATVISILFFITYDYFFIPKRTVDINQTASYAEQNSSSANSAPASQDSINASDSA 67

Query: 64 ALSMSP 69
          A   S 
Sbjct: 68 APVTSN 73


>gi|156043869|ref|XP_001588491.1| hypothetical protein SS1G_10938 [Sclerotinia sclerotiorum 1980]
 gi|154695325|gb|EDN95063.1| hypothetical protein SS1G_10938 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 324

 Score = 39.6 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 22/96 (22%)

Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519
            W  +L   DP                   V I P ++S S+ + +     P       +
Sbjct: 217 LWFPNLLIPDP-------------------VLILPFMLSGSILLNLSGQGRPKTVFMRRL 257

Query: 520 L---NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552
           +     + +  +      P+ +++YW+ S++++  Q
Sbjct: 258 MNSLKVVALAIIPLTLQMPSAMLVYWTSSSLLAYGQ 293


>gi|145549303|ref|XP_001460331.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124428160|emb|CAK92934.1| unnamed protein product [Paramecium tetraurelia]
          Length = 433

 Score = 39.6 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/88 (11%), Positives = 26/88 (29%), Gaps = 4/88 (4%)

Query: 26  VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLK 85
             P+  E   ++   +      +   +    L+      +    R+      +  +I+  
Sbjct: 244 EQPKQTEQPKQQPKQEEEDDAPKKKEANPLDLLPPSTFNIDDYKRIFFAEKDIQKNIDTL 303

Query: 86  GAQFD----DLNLRGYHLDVSSNSPIVT 109
            A  D     L L  Y+   +    ++ 
Sbjct: 304 FATIDLNGWSLWLVRYNKSENEGKQLIL 331


>gi|229043451|ref|ZP_04191161.1| hypothetical protein bcere0027_14990 [Bacillus cereus AH676]
 gi|228725829|gb|EEL77076.1| hypothetical protein bcere0027_14990 [Bacillus cereus AH676]
          Length = 290

 Score = 39.6 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 52/156 (33%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T T              FE  +S + +   F 
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETKITYTVTSNEETLKKYPYEFELLVSYELDGQSFH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159


>gi|255543108|ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis]
 gi|223548578|gb|EEF50069.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis]
          Length = 548

 Score = 39.6 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/236 (11%), Positives = 68/236 (28%), Gaps = 43/236 (18%)

Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401
             + +  ++  F++L G     ++ +      +         +     K  +        
Sbjct: 102 PVRVLVSVLDEFHDLSGLPWWLVIASATVAMRVTLFPLLVLQLHKLK-KISELFPKLPPP 160

Query: 402 KFKQSPPQVLQKAMIQLYKTHNI----NPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457
                  +     +   +K        + L     +  Q+P F      I     + H P
Sbjct: 161 FPPPLSGKSFVDQISLFHKERRALGCPSYLWFLAYVSAQVPCFLLWMTSIRRM-SLDHHP 219

Query: 458 FW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512
            +      W ++L                   P  +   I+P++++   +I +++     
Sbjct: 220 GFDCGGTLWFQNLTEY----------------PHGIAGPIFPLLIACLHYINIQL--AFE 261

Query: 513 DKGQAMILNWMPVV--------------FVFALSSFPAGLIIYWSWSNVISIVQQA 554
                     + ++                F     P G ++YW  ++ +S++QQ 
Sbjct: 262 KFSVQKTTGLLSLLAKYYKLYLDLLTLPLFFIGYCIPQGSLVYWVTNSSLSVIQQM 317


>gi|62897733|dbj|BAD96806.1| zinc finger, DHHC domain containing 6 variant [Homo sapiens]
          Length = 413

 Score = 39.6 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 63/182 (34%), Gaps = 13/182 (7%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
                +    ML+++   ++ N+  A+     FV L + P   +  +     K  Q    
Sbjct: 50  HTTGGSVSFIMLINWTIMILYNYFNAMFAGPGFVPLGWKPEISQDTMYLQYCKVCQAYKA 109

Query: 398 ELREKFKQSPPQVLQKA-----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
                 ++    V++       +       N         +     +  A   V+++  +
Sbjct: 110 PRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFVMTMYTQ 169

Query: 453 MRHAPFWGWIK---DLAAA--DPTNIFTLFGILPFYLPGFMHVGIW--PIIMSLSMFIQM 505
           + H   +GW     D++AA  DP  I   FG+  F    F         I + +  FIQM
Sbjct: 170 LYHRLSFGWNTVKIDMSAARRDPLPIVP-FGLAAFATTLFALGLALGTTIAVGMLFFIQM 228

Query: 506 KM 507
           K+
Sbjct: 229 KI 230


>gi|228920408|ref|ZP_04083753.1| hypothetical protein bthur0011_14220 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228839038|gb|EEM84334.1| hypothetical protein bthur0011_14220 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 290

 Score = 39.6 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 50/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +     
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N S  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPSSKEMFFSIGAHPGFNFPLLDGESFTDY 159


>gi|218895606|ref|YP_002444017.1| internalin protein [Bacillus cereus G9842]
 gi|218543468|gb|ACK95862.1| internalin protein [Bacillus cereus G9842]
          Length = 995

 Score = 39.6 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 41/341 (12%), Positives = 97/341 (28%), Gaps = 35/341 (10%)

Query: 1   MERNWN-----YFVAIALS--VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53
           M++N         +A ALS    +       Y  P +  +  E        +    D   
Sbjct: 1   MKQNKRKRINAMIIAAALSLPFAV-------YSTPALAAVAIEANKTGQGLEDGTYDAVI 53

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
            A       ++++    V +K+P L       G +     L        S+S     L  
Sbjct: 54  KAYKDKTNEESMAA---VYIKDPKLTIE---NGKKIVTATL--------SDSDFFQYLKT 99

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
            +           V + +  +       + +              +   A +  ++    
Sbjct: 100 EDIHTPGVFHDVKVLSEDKKKNGTKVIQFEVGELGKTYNMQMHIYIPTMAYDNKYQVQFE 159

Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
           ++  +    + +    N  +Q   +    + +   +        ++   A +  K L++ 
Sbjct: 160 VNAINLENNVSEKQKENKEEQQDENGNVILDKQLQKYINKYNLDRDNVDAPITKKDLLQI 219

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
           K   I      N      ++   +K      +  +E++             +Y    S +
Sbjct: 220 KTLSIYSGKGINEIAGLEYMTNLEK------LTLRESNVTDISAISKLRSLKYVDLTSNS 273

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
             +I P   +   N LF    +   +    K   I   +++
Sbjct: 274 IESIHPIGQLENINMLFLRDNKISDLTPLSKMKKIKTLDLI 314


>gi|229096182|ref|ZP_04227155.1| hypothetical protein bcere0020_14300 [Bacillus cereus Rock3-29]
 gi|228687142|gb|EEL41047.1| hypothetical protein bcere0020_14300 [Bacillus cereus Rock3-29]
          Length = 290

 Score = 39.6 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  IS + E     
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLISYEVEEQNIH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPASKEMFFSIGAHPGFNFPLLDGESFTDY 159


>gi|229115137|ref|ZP_04244547.1| hypothetical protein bcere0017_14320 [Bacillus cereus Rock1-3]
 gi|228668277|gb|EEL23709.1| hypothetical protein bcere0017_14320 [Bacillus cereus Rock1-3]
          Length = 290

 Score = 39.6 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  IS + E     
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLISYEVEEQNIH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPASKEMFFSIGAHPGFNFPLLDGESFTDY 159


>gi|309810059|ref|ZP_07703905.1| aldose 1-epimerase [Lactobacillus iners SPIN 2503V10-D]
 gi|329921006|ref|ZP_08277534.1| aldose 1-epimerase [Lactobacillus iners SPIN 1401G]
 gi|308169558|gb|EFO71605.1| aldose 1-epimerase [Lactobacillus iners SPIN 2503V10-D]
 gi|328935282|gb|EGG31762.1| aldose 1-epimerase [Lactobacillus iners SPIN 1401G]
          Length = 290

 Score = 39.6 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 45/163 (27%), Gaps = 10/163 (6%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119
            +V ++N  L   + L GA+  ++  L+       Y            L      + +N 
Sbjct: 2   EQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178
           Y  +    +   +  L +            L          K      +  TI+   E  
Sbjct: 62  YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEGTKLVYPYSYTVTITYTLEDT 121

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221
              I   + NN    + +S       +     +N     E  +
Sbjct: 122 YLHINYDIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEPKL 164


>gi|296388650|ref|ZP_06878125.1| lipase chaperone [Pseudomonas aeruginosa PAb1]
          Length = 340

 Score = 39.2 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 20/80 (25%), Gaps = 2/80 (2%)

Query: 5  WNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
              + I L+     AW  +    P  E              P       A         
Sbjct: 2  KKILLLIPLAFAASLAWFVWLEPSPAPETAPPASAQAGADHAPPAASAGEAVPAPQVMPA 61

Query: 64 ALSMSPRVELKNPSLIGSIN 83
           ++  P    +  S+ GS +
Sbjct: 62 KVAPLPT-SFRGTSVDGSFS 80


>gi|228938809|ref|ZP_04101409.1| hypothetical protein bthur0008_14700 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228971690|ref|ZP_04132311.1| hypothetical protein bthur0003_14670 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978299|ref|ZP_04138676.1| hypothetical protein bthur0002_15030 [Bacillus thuringiensis Bt407]
 gi|228781316|gb|EEM29517.1| hypothetical protein bthur0002_15030 [Bacillus thuringiensis Bt407]
 gi|228787780|gb|EEM35738.1| hypothetical protein bthur0003_14670 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228820658|gb|EEM66683.1| hypothetical protein bthur0008_14700 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326939313|gb|AEA15209.1| LACX protein [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 290

 Score = 39.2 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +     
Sbjct: 64  DDKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P   + +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDSESFTDY 159


>gi|313108009|ref|ZP_07794176.1| lipase modulator protein [Pseudomonas aeruginosa 39016]
 gi|310880678|gb|EFQ39272.1| lipase modulator protein [Pseudomonas aeruginosa 39016]
          Length = 340

 Score = 39.2 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 21/80 (26%), Gaps = 2/80 (2%)

Query: 5  WNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
              + I L+     AW  +    P  E            + P       A         
Sbjct: 2  KKILLLIPLAFAASLAWFVWLEPSPAPETAPPASAQAGADRAPPAASAGEAVPAPQVMPA 61

Query: 64 ALSMSPRVELKNPSLIGSIN 83
           ++  P    +  S+ GS +
Sbjct: 62 KVAPLPT-SFRGTSVDGSFS 80


>gi|311896204|dbj|BAJ28612.1| hypothetical protein KSE_28010 [Kitasatospora setae KM-6054]
          Length = 258

 Score = 39.2 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419
             +AI+L T+ V+    PLA+    S      + P++  LRE+     P  L + ++ L+
Sbjct: 27  TAVAIVLFTLAVRAALHPLARSAARSARARARLVPEVARLRERH-GKDPGRLNREVLALH 85

Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVI 447
           +   + P AG  P LLQ P F  +Y++ 
Sbjct: 86  RAAGVGPFAGLLPALLQAPFFSVMYRLF 113


>gi|17569119|ref|NP_508771.1| NPC1 (human Niemann Pick C disease) Related family member (ncr-1)
           [Caenorhabditis elegans]
 gi|37999494|sp|Q19127|NPC1_CAEEL RecName: Full=Niemann-Pick C1 protein homolog 1; Flags: Precursor
 gi|15617769|gb|AAA96211.2| Npc1 (human niemann pick c disease) related protein 1
           [Caenorhabditis elegans]
          Length = 1383

 Score = 39.2 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 12/78 (15%)

Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII------MSLSMFIQMKMSPPPADKG 515
           I  L++     IF++FGI P      +   +  ++      M +  + Q ++S P     
Sbjct: 674 INLLSSFCSWGIFSMFGIHPVKNALVVQFFVVTLLGVCRTFMVVKYYAQQRVSMPYMSPD 733

Query: 516 Q-----AMILN-WMPVVF 527
           Q      M++   MP +F
Sbjct: 734 QCPEIVGMVMAGTMPAMF 751


>gi|312870889|ref|ZP_07730994.1| aldose 1-epimerase [Lactobacillus iners LEAF 3008A-a]
 gi|311093579|gb|EFQ51918.1| aldose 1-epimerase [Lactobacillus iners LEAF 3008A-a]
          Length = 290

 Score = 39.2 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 44/161 (27%), Gaps = 10/161 (6%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119
            +V ++N  L   + L GA+  ++  L+       Y            L      + +N 
Sbjct: 2   EQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178
           Y  +    +   +  L +            L          K      +  TI+   E  
Sbjct: 62  YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEGTKLVYPYSYTVTITYTLEDT 121

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
              I   + NN    + +S       +     +N     E 
Sbjct: 122 YLHINYDIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEP 162


>gi|239633972|gb|ACR84172.1| oxidase assembly 1-like protein [Lepus europaeus]
          Length = 83

 Score = 39.2 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 23/97 (23%)

Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDL 465
                M    K H+I  L      L Q P F + +  +     +           W +DL
Sbjct: 2   KASSEMTLYQKKHDIKLLRPLILPLTQAPXFXSXFIALREXANLPVPSLQTGGLWWFQDL 61

Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502
              DPT                    I P++++ +M+
Sbjct: 62  TVCDPTY-------------------ILPMVVTATMW 79


>gi|322819138|gb|EFZ26356.1| hypothetical protein TCSYLVIO_7466 [Trypanosoma cruzi]
          Length = 435

 Score = 39.2 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 63/201 (31%), Gaps = 20/201 (9%)

Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368
             G++    + + ++      F    +       +    + ++    L     IAI+L  
Sbjct: 34  VVGSEPQNYLEYLDRFWNRQWFGATENLLPLPDASPFADLFVTCQETLGLEPAIAILLFG 93

Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA-------------- 414
              +L     +     ++  M+N   ++    E F++   +    A              
Sbjct: 94  ALSRLCTLYFSLYGERASERMRNAMRRLKAPHEAFQRVYYREGSAALDIQLAATALKGER 153

Query: 415 MIQLYKTHNINPLAGCWPILLQIPV-FFAIYKVISISLEMR---HAPFWGWIKDLAAADP 470
                +    NP   C+  LL  PV FF I +  ++  + R       + W   L   DP
Sbjct: 154 RRVFLEEKTSNP--QCFSSLLGTPVVFFGIVQTTAMCGDPRLDFGTSSFLWCPALTMPDP 211

Query: 471 TNIFTLFGILPFYLPGFMHVG 491
             +  L   +   +   + + 
Sbjct: 212 YGVLPLAFCVLTLMNFELSIS 232


>gi|228926729|ref|ZP_04089797.1| hypothetical protein bthur0010_14450 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228832842|gb|EEM78411.1| hypothetical protein bthur0010_14450 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 290

 Score = 39.2 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +  +  
Sbjct: 64  DDKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEDESFTDY 159


>gi|300117383|ref|ZP_07055173.1| putative lacX protein [Bacillus cereus SJ1]
 gi|298725218|gb|EFI65870.1| putative lacX protein [Bacillus cereus SJ1]
          Length = 302

 Score = 39.2 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +     
Sbjct: 64  DGKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159


>gi|315613348|ref|ZP_07888257.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
 gi|315314583|gb|EFU62626.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
          Length = 416

 Score = 39.2 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/242 (8%), Positives = 64/242 (26%), Gaps = 7/242 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M++N   ++ + L + I   +  F      +    +    + +K   +  +        +
Sbjct: 1   MKKNAILYLGVVLLLAIFLLFSLFINRKESKHQEVQSTTTEVIKSDFEDISGDYISSTGE 60

Query: 61  RAQALSMSP--RVELKNP--SLIGSINL---KGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
           +A     +   R+       ++ G  +    K              D + +  I  L++ 
Sbjct: 61  KATVAKNNQNWRISYNTDEGNVFGDFSTDWKKDGNNRSSVTEFNKSDGNKDFKISILVNN 120

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
            +  +     +       N E+  ++      + K       +       +N   E+ I+
Sbjct: 121 VDDSSNILTVITLSDGNKNHEMVFASRTDYFKNSKDNILQGDLSAFEGTYSNDYLEKAIA 180

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
                L+             +      +       + +     +          +   + 
Sbjct: 181 ESNFTLYGYSPEDYFEDKTSVFPKISKQEGNWLFWSGSTHAQFKLDKSKKPKKNNGYYEV 240

Query: 234 YS 235
           Y 
Sbjct: 241 YF 242


>gi|326633726|gb|ADZ99606.1| LipB [Pseudomonas aeruginosa]
          Length = 283

 Score = 39.2 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 21/80 (26%), Gaps = 2/80 (2%)

Query: 5  WNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
              + I L+     AW  +    P  E            + P       A         
Sbjct: 2  KKILLLIPLAFAASLAWFVWLEPSPAPETAPPASPQAGADRAPPAASAGEAVPAPQVMPA 61

Query: 64 ALSMSPRVELKNPSLIGSIN 83
           ++  P    +  S+ GS +
Sbjct: 62 KVAPLPT-SFRGTSVDGSFS 80


>gi|1752732|dbj|BAA09136.1| lipase modulator protein [Pseudomonas aeruginosa]
 gi|2575870|dbj|BAA23129.1| proposal modulator or activator protein for lipase [Pseudomonas
          aeruginosa]
          Length = 340

 Score = 39.2 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 21/80 (26%), Gaps = 2/80 (2%)

Query: 5  WNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
              + I L+     AW  +    P  E            + P       A         
Sbjct: 2  KKILLLIPLAFAASLAWFVWLEPSPAPETAPPASPQAGADRAPPAASAGEAVPAPQVMPA 61

Query: 64 ALSMSPRVELKNPSLIGSIN 83
           ++  P    +  S+ GS +
Sbjct: 62 KVAPLPT-SFRGTSVDGSFS 80


>gi|85718182|gb|ABC75105.1| lipase [Pseudomonas aeruginosa]
          Length = 340

 Score = 39.2 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 21/80 (26%), Gaps = 2/80 (2%)

Query: 5  WNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
              + I L+     AW  +    P  E            + P       A         
Sbjct: 2  KKILLLIPLAFAASLAWFVWLEPSPAPETAPPASPQAGADRAPPAASAGEAVPAPQVMPA 61

Query: 64 ALSMSPRVELKNPSLIGSIN 83
           ++  P    +  S+ GS +
Sbjct: 62 KVAPLPT-SFRGTSVDGSFS 80


>gi|107102412|ref|ZP_01366330.1| hypothetical protein PaerPA_01003474 [Pseudomonas aeruginosa
          PACS2]
 gi|14549161|sp|Q01725|LIFO_PSEAE RecName: Full=Lipase chaperone; AltName: Full=Lipase foldase;
          AltName: Full=Lipase helper protein; AltName:
          Full=Lipase modulator
 gi|159157939|dbj|BAF92629.1| lipase-specific foldase [Pseudomonas aeruginosa]
          Length = 340

 Score = 39.2 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 21/80 (26%), Gaps = 2/80 (2%)

Query: 5  WNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
              + I L+     AW  +    P  E            + P       A         
Sbjct: 2  KKILLLIPLAFAASLAWFVWLEPSPAPETAPPASPQAGADRAPPAASAGEAVPAPQVMPA 61

Query: 64 ALSMSPRVELKNPSLIGSIN 83
           ++  P    +  S+ GS +
Sbjct: 62 KVAPLPT-SFRGTSVDGSFS 80


>gi|307191338|gb|EFN74947.1| Sortilin-related receptor [Camponotus floridanus]
          Length = 2187

 Score = 39.2 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 92/303 (30%), Gaps = 31/303 (10%)

Query: 28  PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGS---INL 84
           P+IE +       +T  +P  +  S A  + +             +   S + S   I+ 
Sbjct: 641 PKIESVTESITEKETTTEPVSIIESTATTIDEADDVTSKTELHYLMSTESHLESNTEISN 700

Query: 85  KGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI----------- 133
           +        L   +    S S    LL  +N      + +  + T+ N            
Sbjct: 701 QSGSIIKSVLDDANTTDISKS-FTDLLRENNNSKIDESSITTIKTSENPIDDDIYKVIPL 759

Query: 134 ---ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS----------LDEHYLF 180
              +L N+ ++    + +I T  T ++      + I    TI           L +    
Sbjct: 760 TLTKLNNNKSIDTNDNVEIKTELTTMQSYTNKDDKINESTTIEASFTTLSYEDLKQDSDI 819

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
               +   NS  +      G     + ++ T             G   + E   + +   
Sbjct: 820 ISNQSRNENSNTEQFTQNPGLQEEKENESTTEINLNVNLS---DGSTIIKEFDSTTMSII 876

Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300
           SI N  ES +   ++DKY+ ++ I          +            + ++ +++     
Sbjct: 877 SIENRTESITRTTVNDKYFHTIEINDVGNRNQEMYNNSKVHETTMIPETTSTDMSTQSIS 936

Query: 301 SIT 303
           + +
Sbjct: 937 NYS 939


>gi|254740944|ref|ZP_05198632.1| putative lacX protein [Bacillus anthracis str. Kruger B]
          Length = 302

 Score = 39.2 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +  +  
Sbjct: 64  DDKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159


>gi|126741126|ref|ZP_01756807.1| phosphoenolpyruvate synthetase-related protein [Roseobacter sp.
           SK209-2-6]
 gi|126717763|gb|EBA14484.1| phosphoenolpyruvate synthetase-related protein [Roseobacter sp.
           SK209-2-6]
          Length = 1285

 Score = 39.2 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 65/210 (30%), Gaps = 27/210 (12%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
                +      +   + + +    +  + +   +V  +++  P+A K            
Sbjct: 325 QQATLWQQAISALSSALLWVHER-AHLLLGLFALSVLTRIIVLPVALKSERDQITTAESA 383

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
            ++D L+ K     P    +A+   Y    + P+     +L    +   +      S E 
Sbjct: 384 EELDTLK-KNLAQDPIRKARAIQDFYARKGLTPMRNLIALLFLPVMMLGVSAAGEASKE- 441

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
             +  + W+ DL  AD +     F +   +        IW +                  
Sbjct: 442 -TSVSFLWLNDLGVADHS-----FALPVLFCALAAVYLIWAV---------------AKT 480

Query: 514 KGQAM--ILNWMPVVFVFALSSFPAGLIIY 541
             QA   I   +P++F   + S  A   IY
Sbjct: 481 PRQAKLWICLGVPILFA-MVFSLSAAANIY 509


>gi|75759687|ref|ZP_00739770.1| Aldose 1-epimerase family protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218896628|ref|YP_002445039.1| putative lacX protein [Bacillus cereus G9842]
 gi|228900278|ref|ZP_04064508.1| hypothetical protein bthur0014_14840 [Bacillus thuringiensis IBL
           4222]
 gi|74492834|gb|EAO55967.1| Aldose 1-epimerase family protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218545761|gb|ACK98155.1| putative lacX protein [Bacillus cereus G9842]
 gi|228859313|gb|EEN03743.1| hypothetical protein bthur0014_14840 [Bacillus thuringiensis IBL
           4222]
          Length = 290

 Score = 39.2 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  IS + E     
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTNNEETLKKYPYEFELLISYELEGQSVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159


>gi|228932979|ref|ZP_04095842.1| hypothetical protein bthur0009_14500 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228826580|gb|EEM72351.1| hypothetical protein bthur0009_14500 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 290

 Score = 39.2 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +  +  
Sbjct: 64  DDKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159


>gi|228945297|ref|ZP_04107652.1| hypothetical protein bthur0007_14600 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228814269|gb|EEM60535.1| hypothetical protein bthur0007_14600 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 290

 Score = 39.2 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +  +  
Sbjct: 64  DDKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159


>gi|315653130|ref|ZP_07906055.1| aldose epimerase [Lactobacillus iners ATCC 55195]
 gi|315489495|gb|EFU79132.1| aldose epimerase [Lactobacillus iners ATCC 55195]
          Length = 290

 Score = 38.8 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 44/161 (27%), Gaps = 10/161 (6%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119
            +V +KN  L   + L GA+  ++  L+       Y            L      + +N 
Sbjct: 2   EQVTIKNDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178
           Y  +    +   +  L +            L          K      +  TI+   E  
Sbjct: 62  YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEETKLVYPYSYTVTITYTLEDT 121

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
              I   + NN    + +S       +     +N     E 
Sbjct: 122 YLHINYEIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEP 162


>gi|30261694|ref|NP_844071.1| lacX protein, putative [Bacillus anthracis str. Ames]
 gi|47526909|ref|YP_018258.1| lacX protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49184523|ref|YP_027775.1| lacX protein [Bacillus anthracis str. Sterne]
 gi|49477290|ref|YP_035812.1| lacX protein [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|165869513|ref|ZP_02214172.1| putative lacX protein [Bacillus anthracis str. A0488]
 gi|167639114|ref|ZP_02397387.1| putative lacX protein [Bacillus anthracis str. A0193]
 gi|170706465|ref|ZP_02896925.1| putative lacX protein [Bacillus anthracis str. A0389]
 gi|177650440|ref|ZP_02933407.1| putative lacX protein [Bacillus anthracis str. A0174]
 gi|196033619|ref|ZP_03101031.1| putative lacX protein [Bacillus cereus W]
 gi|218902809|ref|YP_002450643.1| putative lacX protein [Bacillus cereus AH820]
 gi|227815553|ref|YP_002815562.1| putative lacX protein [Bacillus anthracis str. CDC 684]
 gi|229601501|ref|YP_002866098.1| putative lacX protein [Bacillus anthracis str. A0248]
 gi|254683183|ref|ZP_05147044.1| putative lacX protein [Bacillus anthracis str. CNEVA-9066]
 gi|254723772|ref|ZP_05185558.1| putative lacX protein [Bacillus anthracis str. A1055]
 gi|254734535|ref|ZP_05192247.1| putative lacX protein [Bacillus anthracis str. Western North
           America USA6153]
 gi|254755186|ref|ZP_05207220.1| putative lacX protein [Bacillus anthracis str. Vollum]
 gi|254759722|ref|ZP_05211746.1| putative lacX protein [Bacillus anthracis str. Australia 94]
 gi|30255922|gb|AAP25557.1| putative lacX protein [Bacillus anthracis str. Ames]
 gi|47502057|gb|AAT30733.1| putative lacX protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178450|gb|AAT53826.1| lacX protein, putative [Bacillus anthracis str. Sterne]
 gi|49328846|gb|AAT59492.1| lacX protein [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|164714953|gb|EDR20471.1| putative lacX protein [Bacillus anthracis str. A0488]
 gi|167512904|gb|EDR88277.1| putative lacX protein [Bacillus anthracis str. A0193]
 gi|170128563|gb|EDS97430.1| putative lacX protein [Bacillus anthracis str. A0389]
 gi|172083584|gb|EDT68644.1| putative lacX protein [Bacillus anthracis str. A0174]
 gi|195994053|gb|EDX58009.1| putative lacX protein [Bacillus cereus W]
 gi|218537955|gb|ACK90353.1| putative lacX protein [Bacillus cereus AH820]
 gi|227004363|gb|ACP14106.1| putative lacX protein [Bacillus anthracis str. CDC 684]
 gi|229265909|gb|ACQ47546.1| putative lacX protein [Bacillus anthracis str. A0248]
          Length = 290

 Score = 38.8 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +  +  
Sbjct: 64  DDKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159


>gi|52143764|ref|YP_083065.1| lacX protein [Bacillus cereus E33L]
 gi|51977233|gb|AAU18783.1| lacX protein [Bacillus cereus E33L]
          Length = 290

 Score = 38.8 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +  +  
Sbjct: 64  DDKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159


>gi|148360931|ref|YP_001252138.1| hypothetical protein LPC_2891 [Legionella pneumophila str. Corby]
 gi|148282704|gb|ABQ56792.1| IcmG (DotF) [Legionella pneumophila str. Corby]
          Length = 268

 Score = 38.8 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 29/102 (28%), Gaps = 14/102 (13%)

Query: 2   ERNWNYFVAIALSVII-----VYAWQNFYVYP---------RIEEMNNERKNIQTVKQPN 47
           +   N  +AI   V I     +  W  F                      + +QT+    
Sbjct: 47  DIKRNALIAIGAVVFIMVMYKIIGWMFFSDKSSQVTTKPAIPPVTQVATPQPVQTIPTTT 106

Query: 48  QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89
            +       +I+D          +EL   SL   +N  G Q 
Sbjct: 107 PIQQVQPTTIIEDDPDLKKKVSAIELTQQSLRSEVNALGEQI 148


>gi|54293445|ref|YP_125860.1| hypothetical protein lpl0494 [Legionella pneumophila str. Lens]
 gi|53753277|emb|CAH14724.1| hypothetical protein lpl0494 [Legionella pneumophila str. Lens]
          Length = 269

 Score = 38.8 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 14/105 (13%)

Query: 2   ERNWNYFVAI---ALSVII--VYAWQNFYVYP---------RIEEMNNERKNIQTVKQPN 47
           +   N  +AI    L +++  +  W  F                      + +QT+    
Sbjct: 48  DIKRNALIAIGAVVLIMVMYKIIGWMFFSDKSSQVTSKPAIPPVTQVATPQPVQTIPTTT 107

Query: 48  QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92
            +       +I+D +        +E+   SL   +N  G Q + +
Sbjct: 108 PIQQVQPTTIIEDDSDLKKKVSAIEMTQQSLRSEVNALGEQINTV 152


>gi|229166533|ref|ZP_04294286.1| hypothetical protein bcere0007_15050 [Bacillus cereus AH621]
 gi|228616937|gb|EEK74009.1| hypothetical protein bcere0007_15050 [Bacillus cereus AH621]
          Length = 290

 Score = 38.8 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +  +  
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETNITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159


>gi|229011010|ref|ZP_04168204.1| hypothetical protein bmyco0001_14620 [Bacillus mycoides DSM 2048]
 gi|228750182|gb|EEM00014.1| hypothetical protein bmyco0001_14620 [Bacillus mycoides DSM 2048]
          Length = 290

 Score = 38.8 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +  +  
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETNITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159


>gi|227524200|ref|ZP_03954249.1| RND superfamily resistance-nodulation-cell division:proton (H+)
           antiporter [Lactobacillus hilgardii ATCC 8290]
 gi|227088431|gb|EEI23743.1| RND superfamily resistance-nodulation-cell division:proton (H+)
           antiporter [Lactobacillus hilgardii ATCC 8290]
          Length = 984

 Score = 38.8 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 5/84 (5%)

Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
             + + + V          +L       +   KDL+A D + ++ L   +      F+ V
Sbjct: 310 VGVAILLAVLLTFNMFFMSTL---GEKLFWPSKDLSAHDRSFLWNLLSKITLS-HTFVMV 365

Query: 491 GIWPIIMSLSMFI-QMKMSPPPAD 513
           GI  I     +F    +++   AD
Sbjct: 366 GILVIAAIPLLFFGTQQLNFNNAD 389


>gi|196038957|ref|ZP_03106264.1| putative lacX protein [Bacillus cereus NVH0597-99]
 gi|228914273|ref|ZP_04077888.1| hypothetical protein bthur0012_15050 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|229090654|ref|ZP_04221887.1| hypothetical protein bcere0021_14780 [Bacillus cereus Rock3-42]
 gi|301053233|ref|YP_003791444.1| lacX protein [Bacillus anthracis CI]
 gi|196030102|gb|EDX68702.1| putative lacX protein [Bacillus cereus NVH0597-99]
 gi|228692596|gb|EEL46322.1| hypothetical protein bcere0021_14780 [Bacillus cereus Rock3-42]
 gi|228845267|gb|EEM90303.1| hypothetical protein bthur0012_15050 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|300375402|gb|ADK04306.1| lacX protein [Bacillus cereus biovar anthracis str. CI]
          Length = 290

 Score = 38.8 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +  +  
Sbjct: 64  DGKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159


>gi|229058325|ref|ZP_04196710.1| hypothetical protein bcere0026_14380 [Bacillus cereus AH603]
 gi|228719999|gb|EEL71588.1| hypothetical protein bcere0026_14380 [Bacillus cereus AH603]
          Length = 290

 Score = 38.8 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +  +  
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETNITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159


>gi|227512984|ref|ZP_03943033.1| possible RND superfamily resistance-nodulation-cell division:proton
           (H+) antiporter [Lactobacillus buchneri ATCC 11577]
 gi|227083741|gb|EEI19053.1| possible RND superfamily resistance-nodulation-cell division:proton
           (H+) antiporter [Lactobacillus buchneri ATCC 11577]
          Length = 984

 Score = 38.8 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 5/84 (5%)

Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
             + + + V          +L       +   KDL+A D + ++ L   +      F+ V
Sbjct: 310 VGVAILLAVLLTFNMFFMSTL---GEKLFWPSKDLSAHDRSFLWNLLSKITLS-HTFVMV 365

Query: 491 GIWPIIMSLSMFI-QMKMSPPPAD 513
           GI  I     +F    +++   AD
Sbjct: 366 GILVIAAIPLLFFGTQQLNFNNAD 389


>gi|301299971|ref|ZP_07206197.1| LPXTG-motif cell wall anchor domain protein [Lactobacillus
           salivarius ACS-116-V-Col5a]
 gi|300852426|gb|EFK80084.1| LPXTG-motif cell wall anchor domain protein [Lactobacillus
           salivarius ACS-116-V-Col5a]
          Length = 962

 Score = 38.8 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 32/339 (9%), Positives = 74/339 (21%), Gaps = 16/339 (4%)

Query: 32  EMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDD 91
           +   +    +      Q D   A      R   +  + +  +         + K AQ  +
Sbjct: 221 KAEAQVNKDKQDVAKAQTDLDNAIAADATRQTNIDNAQK-TVDTTKSNVDFSTKQAQEME 279

Query: 92  LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151
             L  Y     +    V  L+         A ++ ++  +      +   W   S + + 
Sbjct: 280 DQLNKYQGIKDAAQKEVDDLNDK------LANVNTITINDVKAYKKAFNDWYTGSKRGVN 333

Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
            T   K    +  +    +  + D+  +  I     +   +   FS              
Sbjct: 334 WTEEDKNFLNDFMSSNTYKGNAADKDIVVDINHLTADQIKELSLFSADLLNQVRNQLGLP 393

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISD--KYWASVFIPSKET 269
                +                  D     +     +    G+     ++          
Sbjct: 394 KVIVTEGSLKLAKDVTDNYVSDNWDKYDHDVEGISRAAKENGLLTGGNFYEDAI------ 447

Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329
            F S F   S         F+     I              G      I+  ++      
Sbjct: 448 -FSSAFSEKSTMDDLKNILFTGIVSMIGGYGDEMLHAAGLLGVNFGDDINTGKEQYFSAG 506

Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368
             M        ++ K           +  +   +     
Sbjct: 507 TSMFPIKEDQMWVTKMGHFFNVSKDYINDSAKFSTTEVP 545


>gi|207108416|ref|ZP_03242578.1| putative inner membrane protein translocase component YidC
           [Helicobacter pylori HPKX_438_CA4C1]
          Length = 35

 Score = 38.8 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 20/33 (60%)

Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573
           YW+ +N++S++QQ +I K+   +  +  + +  
Sbjct: 2   YWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 34


>gi|229069250|ref|ZP_04202540.1| hypothetical protein bcere0025_14550 [Bacillus cereus F65185]
 gi|228713737|gb|EEL65622.1| hypothetical protein bcere0025_14550 [Bacillus cereus F65185]
          Length = 290

 Score = 38.8 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNIEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +     
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   + N +  ++ FS       + P     +F   
Sbjct: 124 VTYEINNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159


>gi|229016981|ref|ZP_04173901.1| hypothetical protein bcere0030_15460 [Bacillus cereus AH1273]
 gi|229023162|ref|ZP_04179673.1| hypothetical protein bcere0029_15040 [Bacillus cereus AH1272]
 gi|228738087|gb|EEL88572.1| hypothetical protein bcere0029_15040 [Bacillus cereus AH1272]
 gi|228744252|gb|EEL94334.1| hypothetical protein bcere0030_15460 [Bacillus cereus AH1273]
          Length = 290

 Score = 38.8 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +  +  
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159


>gi|227510053|ref|ZP_03940102.1| RND superfamily resistance-nodulation-cell division:proton (H+)
           antiporter [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227190432|gb|EEI70499.1| RND superfamily resistance-nodulation-cell division:proton (H+)
           antiporter [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 984

 Score = 38.8 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 5/84 (5%)

Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490
             + + + V          +L       +   KDL+A D + ++ L   +      F+ V
Sbjct: 310 VGVAILLAVLLTFNMFFMSTL---GEKLFWPSKDLSAHDRSFLWNLLSKITLS-HTFVMV 365

Query: 491 GIWPIIMSLSMFI-QMKMSPPPAD 513
           GI  I     +F    +++   AD
Sbjct: 366 GILVIAAIPLLFFGTQQLNFNNAD 389


>gi|297588604|ref|ZP_06947247.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
 gi|297573977|gb|EFH92698.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
          Length = 1214

 Score = 38.8 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 72/235 (30%), Gaps = 4/235 (1%)

Query: 24  FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSIN 83
            ++  ++ E     +N    ++ N +  S         A A       ++ N     +I+
Sbjct: 183 DFLNKKLAEKKPAAENTPAAEETNALGISEETKREAVAASADEKREPKDISNEVTDVNIS 242

Query: 84  LKGAQFDDLNLRGYHLDVSSNSPIVTLLSP-SNTKNAYFAELDYVSTANNIELPNSNTVW 142
           +KG   +D  +    +    +    T      +T+     +     TA   +  +     
Sbjct: 243 IKGLDNEDATMIK-PIAEDPDIKGKTFNDQLYDTQAMAHVDFRVPDTAVAGDTIDIKLSP 301

Query: 143 NLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGR 201
           N+    I++   P  L  K  + ++ +     +     + + D V N    +I       
Sbjct: 302 NVNPNGIVSDFNPEALDAKIGSEVVGKAYYDKENSLMRYTLTDLVKNYGNVKIVSEFPLF 361

Query: 202 IMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISD 256
           I + K     +        +     +      Y+  +    +    SN +  I+ 
Sbjct: 362 IDKEKVTEPVSD-QKVSVSVGNKTQEKTYTVDYNMSDVGQKNKKFVSNGYSDITH 415


>gi|229189779|ref|ZP_04316792.1| hypothetical protein bcere0002_14550 [Bacillus cereus ATCC 10876]
 gi|228593693|gb|EEK51499.1| hypothetical protein bcere0002_14550 [Bacillus cereus ATCC 10876]
          Length = 290

 Score = 38.8 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +     
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159


>gi|218235409|ref|YP_002366380.1| putative lacX protein [Bacillus cereus B4264]
 gi|218163366|gb|ACK63358.1| putative lacX protein [Bacillus cereus B4264]
          Length = 290

 Score = 38.8 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNIEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +     
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159


>gi|228952077|ref|ZP_04114172.1| hypothetical protein bthur0006_14880 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228807609|gb|EEM54133.1| hypothetical protein bthur0006_14880 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 290

 Score = 38.8 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNIEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +     
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159


>gi|118477134|ref|YP_894285.1| lacX protein [Bacillus thuringiensis str. Al Hakam]
 gi|118416359|gb|ABK84778.1| lacX protein [Bacillus thuringiensis str. Al Hakam]
          Length = 290

 Score = 38.8 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 52/158 (32%), Gaps = 10/158 (6%)

Query: 70  RVELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAY 120
            + ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y
Sbjct: 2   TLTIQNEKVIVSISDKGAELQSIRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTY 61

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179
           + +    S   +    +        S   +T                FE  +S + +  +
Sbjct: 62  YVDGKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQI 121

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
             +   V N +  ++ FS       + P     +F   
Sbjct: 122 VHVTYEVNNPTSKEMFFSIGAHPGFNFPLLEDESFTDY 159


>gi|25145427|ref|NP_500037.2| hypothetical protein Y55F3AR.1 [Caenorhabditis elegans]
 gi|21913077|gb|AAF60807.2| Hypothetical protein Y55F3AR.1 [Caenorhabditis elegans]
          Length = 317

 Score = 38.8 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 85/275 (30%), Gaps = 59/275 (21%)

Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376
           TI         P       +    +IA+ +   M   + L  ++  A +   + +++   
Sbjct: 28  TISRRNMSALPPAIAPAFQYASDCYIAQSIQFGMESLHGLGLSWPGAFISAAILLRIGTA 87

Query: 377 PLAKKQYVSTANMKNIQP-----KIDELREKFK---------------QSPPQVLQKAMI 416
           PL        AN  + Q       + ++ E+++                S P++ +    
Sbjct: 88  PLHIYAEKLFANRLHAQNFLTQGIMKKVSERYRVQLGPSTDGTKLEVKSSDPKIAKATQD 147

Query: 417 QLYKTHNINPLAGCWPILLQ------IPVFFAIYKVISISLEMRHAPFW---GWIKDLAA 467
            L +   +    G     +Q      +PV+      +   +     P      WI D+ A
Sbjct: 148 ALQEVPAMLAEHGLQAARIQNLKMCTVPVWIFSSFALRNVINSDFHPSVAGHLWIPDMLA 207

Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI---QMKMSPPPADKG---QAM--- 518
            DP                     I P+ + +  F+     +   P   K    Q     
Sbjct: 208 PDPYF-------------------ILPVAVGVFGFLNLYSQRKIYPGVVKMTWKQKSYDG 248

Query: 519 ILNWMPVVFVF-ALSSFPAGLIIYWSWSNVISIVQ 552
           +L +   +F    ++  PA + +YW   +   + Q
Sbjct: 249 VLAFFT-MFAVTIMAQLPACIPLYWLIVSTTGMAQ 282


>gi|120611066|ref|YP_970744.1| zonular occludens toxin [Acidovorax citrulli AAC00-1]
 gi|120589530|gb|ABM32970.1| Zonular occludens toxin [Acidovorax citrulli AAC00-1]
          Length = 478

 Score = 38.8 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 9   VAIALSVI--IVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66
           +  ALS +  I   WQ F   P  ++   +   +  ++    VD + +A         ++
Sbjct: 261 IMFALSGVGFIWLGWQIFGPAPEPKKPVQQPAKLMVMQGGKLVDPTASASPAARPQAVVA 320

Query: 67  MS 68
            +
Sbjct: 321 TA 322


>gi|296106003|ref|YP_003617703.1| IcmG (DotF) [Legionella pneumophila 2300/99 Alcoy]
 gi|46398531|gb|AAS91951.1| IcmG protein [Legionella pneumophila]
 gi|46398541|gb|AAS91956.1| IcmG protein [Legionella pneumophila]
 gi|46398547|gb|AAS91959.1| IcmG protein [Legionella pneumophila]
 gi|295647904|gb|ADG23751.1| IcmG (DotF) [Legionella pneumophila 2300/99 Alcoy]
          Length = 269

 Score = 38.8 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 29/102 (28%), Gaps = 14/102 (13%)

Query: 2   ERNWNYFVAIALSVII-----VYAWQNFYVYP---------RIEEMNNERKNIQTVKQPN 47
           +   N  +AI   V I     +  W  F                      + +QT+    
Sbjct: 48  DIKRNALIAIGAVVFIMVMYKIIGWMFFSDKSSQVTTKPAIPPVTQVATPQPVQTIPTTT 107

Query: 48  QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89
            +       +I+D          +EL   SL   +N  G Q 
Sbjct: 108 PIQQVQPTTIIEDDPDLKKKVSAIELTQQSLRSEVNALGEQI 149


>gi|270296999|ref|ZP_06203198.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270272986|gb|EFA18849.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 1073

 Score = 38.4 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/213 (10%), Positives = 48/213 (22%), Gaps = 10/213 (4%)

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
                   A +      V    P    + + +         + +   ++   P       
Sbjct: 750 KEATAQQPATSKEEGNLVAFSGPDFKATFDKQSGLLTSYLYKKHEYILNGQGPRP-FFWR 808

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
           + T N Y A L     A            +         TT          +  ++ T  
Sbjct: 809 APTDNDYGANLPVRLKAWKEASYQEPKAESFQVTPGSNATTIKVTYRFPQTDARWDITYK 868

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV--- 230
           +    + K+ +               G  M+        T+  +         ++     
Sbjct: 869 IYASGVIKVDNRFVAEGDQAPMIPRVGLRMQLPESFTDLTYYGRGPKENYRDRRTSQFIG 928

Query: 231 ------EQKYSDIEKSSISNFHESNSWLGISDK 257
                 +  Y    +   +N      W   +DK
Sbjct: 929 EYAIPVKNMYEPYVRPQENNHRTDIYWCAFTDK 961


>gi|229078880|ref|ZP_04211432.1| hypothetical protein bcere0023_15420 [Bacillus cereus Rock4-2]
 gi|228704294|gb|EEL56728.1| hypothetical protein bcere0023_15420 [Bacillus cereus Rock4-2]
          Length = 290

 Score = 38.4 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNIEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +     
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159


>gi|46398525|gb|AAS91948.1| IcmG protein [Legionella pneumophila]
 gi|46398549|gb|AAS91960.1| IcmG protein [Legionella pneumophila]
 gi|307609260|emb|CBW98727.1| Dot/Icm secretion system protein [Legionella pneumophila 130b]
          Length = 269

 Score = 38.4 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%), Gaps = 14/102 (13%)

Query: 2   ERNWNYFVAI---ALSVII--VYAWQNFYVYP---------RIEEMNNERKNIQTVKQPN 47
           +   N  +AI    L +++  +  W  F                      + +QT+    
Sbjct: 48  DIKRNALIAIGAVVLIMVMYKIIGWMFFSDKSSQVTSKPAIPPVTQVATPQPVQTIPTTT 107

Query: 48  QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89
            +       +I+D +        +E+   SL   +N  G Q 
Sbjct: 108 PIQQVQPTTIIEDDSDLKKKVSAIEMTQQSLRSEVNALGEQI 149


>gi|253729791|ref|ZP_04863956.1| leukocidin subunit [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253726449|gb|EES95178.1| leukocidin subunit [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 350

 Score = 38.4 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 32/331 (9%), Positives = 84/331 (25%), Gaps = 24/331 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+      +A +LS  I+             + + ++   + V +  Q D         +
Sbjct: 1   MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN 60

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                 +    ++         + K     +L    +  D + +   V L+    + ++ 
Sbjct: 61  STAPDDIGKNGKI-TKRTETVYDEKTNILQNLQF-DFIDDPTYD-KNVLLVKKQGSIHSN 117

Query: 121 FAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
                +     +N     S    +    +        +L     +    + T S      
Sbjct: 118 LKFESHKEEKNSNWLKYPSEYHVDFQVKRNPKTEILDQLPKNKISTAKVDSTFSYSSGGK 177

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           F     +   S +    +       +    +   N + V    IA      L        
Sbjct: 178 FDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIA----NDLKYGGEVKN 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
               +  +  +               + + E SF S+++Y +   + +  +F        
Sbjct: 234 RNDELLFYRNTRI-----------ATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEK 282

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328
             +            +    + +       P
Sbjct: 283 SNEKTQFEVTY---TRNQDILKNRPGIHYAP 310


>gi|229178105|ref|ZP_04305476.1| hypothetical protein bcere0005_14670 [Bacillus cereus 172560W]
 gi|228605235|gb|EEK62685.1| hypothetical protein bcere0005_14670 [Bacillus cereus 172560W]
          Length = 290

 Score = 38.4 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSVRLKEDNIEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +     
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159


>gi|156844467|ref|XP_001645296.1| Tkp1 protein [Vanderwaltozyma polyspora DSM 70294]
 gi|156115956|gb|EDO17438.1| Tkp1 protein [Vanderwaltozyma polyspora DSM 70294]
          Length = 1295

 Score = 38.4 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 89/309 (28%), Gaps = 31/309 (10%)

Query: 28  PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGA 87
           P I  +++    +      +   NS +  +I D   +L  SP +         +I+  G 
Sbjct: 613 PEIPSLSDSPPALPDQLIDSSPKNSDSGGIIADTTISLDTSPDIS-----HSLAISPSGG 667

Query: 88  QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147
             DDL       + SS +P+   LSP N+ +    +    +    I     ++       
Sbjct: 668 TIDDL-------NTSSTNPLSLSLSPQNSNSGGITQTSVSTDLGGIGKEQDSSKKRNREN 720

Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207
                   +    KN  +     +I        +I    +             +   + P
Sbjct: 721 DENNDKDHLPYWEKNNMS-----SIKFPPKQRRRIHYINS------------VKHAVNNP 763

Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267
            +  NT       I+   +    E  Y       +    + N+W      Y      P K
Sbjct: 764 PSVGNTSMSYRDAISSNQNVREKEL-YRKAYMKELDQLMKHNTWDNSRI-YDVKEVNPKK 821

Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327
             +    F    DG  + +     ++            N +   A         + D+ I
Sbjct: 822 IINSMIIFTTKRDGTHKCRFVARGDQQNAGTYDDSLIANTIHHEALMTCMAIALDNDMFI 881

Query: 328 PRFEMLIDW 336
            + ++   +
Sbjct: 882 VQLDISSAY 890


>gi|57650694|ref|YP_186828.1| Aerolysin/leukocidin family protein [Staphylococcus aureus subsp.
           aureus COL]
 gi|87162038|ref|YP_494626.1| Aerolysin/leukocidin family protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88195915|ref|YP_500726.1| hypothetical protein SAOUHSC_02243 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151222140|ref|YP_001332962.1| leukocidin/hemolysin toxin subunit S [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|161510231|ref|YP_001575890.1| leukocidin subunit [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221140350|ref|ZP_03564843.1| leukocidin subunit [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|258452369|ref|ZP_05700379.1| leukocidin/hemolysin toxin subunit S [Staphylococcus aureus A5948]
 gi|262050264|ref|ZP_06023113.1| hypothetical protein SAD30_0411 [Staphylococcus aureus D30]
 gi|282925005|ref|ZP_06332670.1| conserved hypothetical leukocidin-like protein 2 [Staphylococcus
           aureus A9765]
 gi|284025054|ref|ZP_06379452.1| Aerolysin/leukocidin family protein [Staphylococcus aureus subsp.
           aureus 132]
 gi|294849560|ref|ZP_06790302.1| leukocidin-like protein 2 [Staphylococcus aureus A9754]
 gi|304379193|ref|ZP_07361936.1| leukocidin subunit [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|81694126|sp|Q5HEH9|LUKL2_STAAC RecName: Full=Uncharacterized leukocidin-like protein 2; Flags:
           Precursor
 gi|122539025|sp|Q2FWN9|LUKL2_STAA8 RecName: Full=Uncharacterized leukocidin-like protein 2; Flags:
           Precursor
 gi|123485065|sp|Q2FFA2|LUKL2_STAA3 RecName: Full=Uncharacterized leukocidin-like protein 2; Flags:
           Precursor
 gi|57284880|gb|AAW36974.1| Aerolysin/Leukocidin family protein [Staphylococcus aureus subsp.
           aureus COL]
 gi|87128012|gb|ABD22526.1| Aerolysin/Leukocidin family protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87203473|gb|ABD31283.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150374940|dbj|BAF68200.1| leukocidin/hemolysin toxin family S subunit [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|160369040|gb|ABX30011.1| possible leukocidin subunit [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257859956|gb|EEV82794.1| leukocidin/hemolysin toxin subunit S [Staphylococcus aureus A5948]
 gi|259161650|gb|EEW46243.1| hypothetical protein SAD30_0411 [Staphylococcus aureus D30]
 gi|269941479|emb|CBI49876.1| putative leukocidin S subunit [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282592699|gb|EFB97706.1| conserved hypothetical leukocidin-like protein 2 [Staphylococcus
           aureus A9765]
 gi|294823697|gb|EFG40124.1| leukocidin-like protein 2 [Staphylococcus aureus A9754]
 gi|302751902|gb|ADL66079.1| leukocidin/lemolysin toxin family protein [Staphylococcus aureus
           subsp. aureus str. JKD6008]
 gi|304342239|gb|EFM08135.1| leukocidin subunit [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|315196776|gb|EFU27121.1| possible leukocidin subunit [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320139611|gb|EFW31480.1| beta-channel forming cytolysin [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143654|gb|EFW35432.1| beta-channel forming cytolysin [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314683|gb|AEB89096.1| Uncharacterized leukocidin-like protein 2 [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329724925|gb|EGG61427.1| beta-channel forming cytolysin [Staphylococcus aureus subsp. aureus
           21189]
          Length = 351

 Score = 38.4 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 32/331 (9%), Positives = 84/331 (25%), Gaps = 24/331 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+      +A +LS  I+             + + ++   + V +  Q D         +
Sbjct: 1   MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN 60

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                 +    ++         + K     +L    +  D + +   V L+    + ++ 
Sbjct: 61  STAPDDIGKNGKI-TKRTETVYDEKTNILQNLQF-DFIDDPTYD-KNVLLVKKQGSIHSN 117

Query: 121 FAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
                +     +N     S    +    +        +L     +    + T S      
Sbjct: 118 LKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGK 177

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           F     +   S +    +       +    +   N + V    IA      L        
Sbjct: 178 FDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIA----NDLKYGGEVKN 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
               +  +  +               + + E SF S+++Y +   + +  +F        
Sbjct: 234 RNDELLFYRNTRI-----------ATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEK 282

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328
             +            +    + +       P
Sbjct: 283 SNEKTQFEVTY---TRNQDILKNRPGIHYAP 310


>gi|164687579|ref|ZP_02211607.1| hypothetical protein CLOBAR_01220 [Clostridium bartlettii DSM
           16795]
 gi|164603353|gb|EDQ96818.1| hypothetical protein CLOBAR_01220 [Clostridium bartlettii DSM
           16795]
          Length = 1241

 Score = 38.4 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 39/338 (11%), Positives = 87/338 (25%), Gaps = 14/338 (4%)

Query: 91  DLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL 150
           + +   Y+   + +   + L S +   +            NN    ++   +        
Sbjct: 489 EFDFERYNNSQNKDKQGIILFSITKHNDQEREAQKVSKRINNSFYEHNQFKYVNEKKSKN 548

Query: 151 TPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210
                +       NN+ F R++  D+  +          S     F  +           
Sbjct: 549 IEIISVVNKNTQENNMTF-RSLDFDDKQIIYQEVLTKEQSEQIHTFIQKSEPFILSGIAG 607

Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270
           +         I  + +K       S I   + SN  +      + + Y+           
Sbjct: 608 SGKTISTVKLIPDMVEKIKNMGSDSKILYVTFSNNLKQYVKEKVIESYY----------E 657

Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330
           F+      +      +  +  N   I   + IT   +     K    +H   +D  I +F
Sbjct: 658 FNEYIDIKTFEDVCTELNYKYNNKKIDRSRIITQNTYKKNFTKFLNYLHQTSRDGNILKF 717

Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM---LTTVFVKLLFFPLAKKQYVSTA 387
                       ++   +L    Y         I+           +             
Sbjct: 718 IKKYQKEKNIIYSEIFGILKGSMYVDWDREEKDIVKSEYYINNSNKIVEDYKIFAEEDRE 777

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425
            + +I  K ++   + +      +   +  L K  NIN
Sbjct: 778 ILYSITQKYNQWLVENEYYDINDIAFELQSLIKDKNIN 815


>gi|116622044|ref|YP_824200.1| major facilitator transporter [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225206|gb|ABJ83915.1| major facilitator superfamily MFS_1 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 739

 Score = 38.4 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 49/135 (36%), Gaps = 28/135 (20%)

Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA-ADPTNIFTLFGILP----------- 481
            +   +F+     ++I+  +     +GWI       D     T     P           
Sbjct: 504 WMHQCLFWGCMLAVAITFPL----VFGWIHFRTLLGDQLTYVTYLFGFPMGAFRLHTITA 559

Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF-ALSSFPAGLII 540
           + L   + +    ++  +++ +  +M+   A   Q   ++++P++ +F    +   GL +
Sbjct: 560 WLLFHGLDISALLVLAGIALSLWRRMTDKGARTLQQFGMDFLPIIMLFAISVT---GLAL 616

Query: 541 YWSWSNVISIVQQAV 555
                   ++ Q+ +
Sbjct: 617 --------TVSQEWL 623


>gi|322790714|gb|EFZ15458.1| hypothetical protein SINV_00786 [Solenopsis invicta]
          Length = 663

 Score = 38.4 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 11/120 (9%)

Query: 429 GCWPILLQIPVFFA--IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486
                ++Q        +  +I  ++ +R       +   +     N F  F + P     
Sbjct: 183 AILSDVIQGLAMIGVSLVIIIQGTINVRGPANVLNVT--SERGRLNFFN-FDMDPTLRVT 239

Query: 487 FMHVGIWPIIMSLSMF------IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540
                +  + MSLS+F      +Q   S     K    ++  MP++ V    S+  G++I
Sbjct: 240 TTSATLGQLFMSLSIFGCQQNFVQRYCSMSSQSKVVKTMMANMPIIMVLFSLSWIVGMVI 299


>gi|325911632|ref|ZP_08174040.1| aldose 1-epimerase [Lactobacillus iners UPII 143-D]
 gi|325476618|gb|EGC79776.1| aldose 1-epimerase [Lactobacillus iners UPII 143-D]
          Length = 290

 Score = 38.4 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 44/161 (27%), Gaps = 10/161 (6%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119
            +V +KN  L   + L GA+  ++  L+       Y            L      + +N 
Sbjct: 2   EQVTIKNDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61

Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178
           Y  +    +   +  L +            L          K      +  TI+   E  
Sbjct: 62  YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEGTKLVYPYSYTVTITYTLEDT 121

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219
              I   + NN    + +S       +     +N     E 
Sbjct: 122 YLHINYDIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEP 162


>gi|159130911|gb|EDP56024.1| mitochondrial export translocase Oxa2, putative [Aspergillus
           fumigatus A1163]
          Length = 336

 Score = 38.4 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 6/54 (11%)

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEI--GLIDRLRSTF----SKNYNSQ 581
            P+ L+IYW  S  I+ +Q  ++ +   ++       ++   +     K   S+
Sbjct: 282 MPSALMIYWISSTNIATLQTFLLERFMLSKPLLEPWRQIHIGYPQKGEKTPPSK 335


>gi|228474859|ref|ZP_04059588.1| conserved hypothetical protein [Staphylococcus hominis SK119]
 gi|228271091|gb|EEK12471.1| conserved hypothetical protein [Staphylococcus hominis SK119]
          Length = 286

 Score = 38.4 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/180 (11%), Positives = 51/180 (28%), Gaps = 10/180 (5%)

Query: 77  SLIGSINLKG--AQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY----VSTA 130
            + G I+  G     +D  L  + L + S   IV L   +  ++ Y+    +    +S  
Sbjct: 62  KVDGVISSNGTRGDIEDKLLFKHSLTIDSAKKIVQL---AQQQHIYYEVFPFEGDRISLI 118

Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190
            +               ++       +    N       + I  D +    + +   N  
Sbjct: 119 EDQSWMEDMIDSEHPQNEVSESEWKSRRDAMNGKINW-RKDIPNDAYSKIYLFNKKLNKI 177

Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250
                   + +++ +   + ++ F  +     V     + E       K   +     + 
Sbjct: 178 KTFRDELIQNKVLLNISVSNSSRFNAETMAYQVDKGTGIKEMIDHFDIKQEETLVIGDSD 237


>gi|253996585|ref|YP_003048649.1| hypothetical protein Mmol_1216 [Methylotenera mobilis JLW8]
 gi|253983264|gb|ACT48122.1| conserved hypothetical protein [Methylotenera mobilis JLW8]
          Length = 314

 Score = 38.4 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 8/64 (12%), Positives = 21/64 (32%), Gaps = 2/64 (3%)

Query: 5   WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64
            N  +AI +S+++      F+  P++E          +++         A          
Sbjct: 44  RNTLLAIIISILVHLG--IFFFAPKVEFDQPPASPASSIEVSLAPPQKPAVAPQPKIEPP 101

Query: 65  LSMS 68
            + +
Sbjct: 102 KNET 105


>gi|146189617|emb|CAM91757.1| polyprotein [Vanderwaltozyma polyspora]
          Length = 1699

 Score = 38.4 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 89/309 (28%), Gaps = 31/309 (10%)

Query: 28   PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGA 87
            P I  +++    +      +   NS +  +I D   +L  SP +         +I+  G 
Sbjct: 1017 PEIPSLSDSPPALPDQLIDSSPKNSDSGGIIADTTISLDTSPDIS-----HSLAISPSGG 1071

Query: 88   QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147
              DDL       + SS +P+   LSP N+ +    +    +    I     ++       
Sbjct: 1072 TIDDL-------NTSSTNPLSLSLSPQNSNSGGITQTSVSTDLGGIGKEQDSSKKRNREN 1124

Query: 148  KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207
                    +    KN  +     +I        +I    +             +   + P
Sbjct: 1125 DENNDKDHLPYWEKNNMS-----SIKFPPKQRRRIHYINS------------VKHAVNNP 1167

Query: 208  QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267
             +  NT       I+   +    E  Y       +    + N+W      Y      P K
Sbjct: 1168 PSVGNTSMSYRDAISSNQNVREKEL-YRKAYMKELDQLMKHNTWDNSRI-YDVKEVNPKK 1225

Query: 268  ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327
              +    F    DG  + +     ++            N +   A         + D+ I
Sbjct: 1226 IINSMIIFTTKRDGTHKCRFVARGDQQNAGTYDDSLIANTIHHEALMTCMAIALDNDMFI 1285

Query: 328  PRFEMLIDW 336
             + ++   +
Sbjct: 1286 VQLDISSAY 1294


>gi|206967913|ref|ZP_03228869.1| LPXTG-motif cell wall anchor domain protein [Bacillus cereus
           AH1134]
 gi|206736833|gb|EDZ53980.1| LPXTG-motif cell wall anchor domain protein [Bacillus cereus
           AH1134]
          Length = 1086

 Score = 38.4 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 36/360 (10%), Positives = 96/360 (26%), Gaps = 36/360 (10%)

Query: 1   MERNWN-----YFVAIALS--VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53
           M++N         +A ALS    +       Y  P +  +  E        +    +   
Sbjct: 1   MKQNKRKRINAMIIAAALSLPFAV-------YSTPALAAVAIEANKTGQGLEDGTYEAVI 53

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
            A       ++++    V +K+P L       G +     L        S+S     L  
Sbjct: 54  KAYKDKTNEESMAA---VYIKDPKLTIE---NGKKIVTATL--------SDSDFFQYLKT 99

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLIS----GKILTPTTPIKLVFKNANNILFE 169
            +           V + +  +       + +        +        + + N   + FE
Sbjct: 100 EDIHTPGVFHDVKVISEDKKKNGTKVIEFEVGELGKRYNMRMHIYIPTMTYDNKYQVQFE 159

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
                 E+ + +       + +DQ        + +   +        +E     +  + L
Sbjct: 160 VNTLNLENNVPEKQKENKEDKVDQQDGIGNVIVDKQLQRHINKYNLNRENLDTPITKEDL 219

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
           ++ K   + ++      + +    +++          +    + +F             +
Sbjct: 220 LKVKSLIVVEAKNKGIQDVSGLEYMTN---LENLTLEEVKLKNIKFISELRQLKSLSITY 276

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
                 I P   +    FL     +   +    +   I   ++  ++         +  L
Sbjct: 277 -GELEDIGPLAELEHIEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKDIKPLFTVKSL 335


>gi|196046610|ref|ZP_03113834.1| putative lacX protein [Bacillus cereus 03BB108]
 gi|225863553|ref|YP_002748931.1| putative lacX protein [Bacillus cereus 03BB102]
 gi|229183885|ref|ZP_04311101.1| hypothetical protein bcere0004_14520 [Bacillus cereus BGSC 6E1]
 gi|196022543|gb|EDX61226.1| putative lacX protein [Bacillus cereus 03BB108]
 gi|225786578|gb|ACO26795.1| putative lacX protein [Bacillus cereus 03BB102]
 gi|228599537|gb|EEK57141.1| hypothetical protein bcere0004_14520 [Bacillus cereus BGSC 6E1]
          Length = 290

 Score = 38.4 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I SI+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVSISDKGAELQSIRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +  +  
Sbjct: 64  DGKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEDESFTDY 159


>gi|293401290|ref|ZP_06645434.1| HepA/SNF2 family protein [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305416|gb|EFE46661.1| HepA/SNF2 family protein [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 1075

 Score = 38.4 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 35/384 (9%), Positives = 108/384 (28%), Gaps = 11/384 (2%)

Query: 63  QALSMSPRVELKNPSLIGSINLKGAQFDDL--NLRGYHLDVSS----NSPIVTLLSPSNT 116
            ++++S  V +++  L    +      ++L   L+ Y L+       N   V +   +  
Sbjct: 482 DSVNISMGVRIESDLLEIDFDTFDFPVEELQEVLKAYRLNKKYYRMRNGSFVNIEDSALQ 541

Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176
           + ++  +  +VS             +  +          +  V ++A      R+I   +
Sbjct: 542 ELSFILDGMHVSEKELESGKIKVPKYRSLYIDKSLKDAEMIKVERDATFKDIIRSIRNVK 601

Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236
              FK+  ++ N   +  +   R                       +     L ++K  D
Sbjct: 602 DSDFKVPHSLKNILRNYQKDGFRWLKTMANYGFGGILADDMGIGKTLQVITLLEDEKLHD 661

Query: 237 IEKSS--ISNFHESNSWLGISDKY--WASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
            +  S  +       +W     K+    +  + +          Y +  +      +   
Sbjct: 662 PQAISLVVCPSSLILNWQSEIAKFSDALTSILITGNMEERKALIYKAKDYDVVITSYDYL 721

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352
           +  I   ++   T  +   A+     H+ +  +++ + +    +       +     +  
Sbjct: 722 KRDIEHYENFHFTYQIIDEAQYIKN-HNTKNAVSVKQIQAAHRFALTGTPIENSLAELWS 780

Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412
            ++ +    +           +               + ++P I    +K          
Sbjct: 781 IFDFLMPGYLYTYPYFKKQYEIPIVKENDPITLKELKRMVEPFILRRVKKDVLKELPEKV 840

Query: 413 KAMIQLYKTHNINPLAGCWPILLQ 436
           +  + +        L      L++
Sbjct: 841 EHTMMIELDEETRKLYMANVSLIR 864


>gi|228984777|ref|ZP_04144949.1| hypothetical protein bthur0001_14780 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228774975|gb|EEM23369.1| hypothetical protein bthur0001_14780 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 290

 Score = 38.4 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I +I+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVTISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +  +  
Sbjct: 64  DGKPYSLTQHGFARDLTFSVKEKSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159


>gi|329731533|gb|EGG67896.1| beta-channel forming cytolysin [Staphylococcus aureus subsp. aureus
           21193]
          Length = 321

 Score = 38.4 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 32/331 (9%), Positives = 84/331 (25%), Gaps = 24/331 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+      +A +LS  I+             + + ++   + V +  Q D         +
Sbjct: 1   MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN 60

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                 +    ++         + K     +L    +  D + +   V L+    + ++ 
Sbjct: 61  STAPDDIGKNGKI-TKRTETVYDEKTNILQNLQF-DFIDDPTYD-KNVLLVKKQGSIHSN 117

Query: 121 FAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
                +     +N     S    +    +        +L     +    + T S      
Sbjct: 118 LKFESHKEEKNSNWLKYPSEYHVDFQVKRNPKTEILDQLPKNKISTAKVDSTFSYSSGGK 177

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           F     +   S +    +       +    +   N + V    IA      L        
Sbjct: 178 FDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIA----NDLKYGGEVKN 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
               +  +  +               + + E SF S+++Y +   + +  +F        
Sbjct: 234 RNDELLFYRNTRI-----------ATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEK 282

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328
             +            +    + +       P
Sbjct: 283 SNEKTQFEVTY---TRNQDILKNRPGIHYAP 310


>gi|219852861|ref|YP_002467293.1| hydrolase (metallo-beta-lactamase superfamily)-like protein
           [Methanosphaerula palustris E1-9c]
 gi|219547120|gb|ACL17570.1| hydrolase (metallo-beta-lactamase superfamily)-like protein
           [Methanosphaerula palustris E1-9c]
          Length = 342

 Score = 38.4 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 28/101 (27%), Gaps = 16/101 (15%)

Query: 1   MERNWNYFV----AIALSVIIVYAWQNFYVY-----------PRIEEMNNERKNIQTVKQ 45
           M+   N  +    A+ L   +   +  F+                E M N    I T + 
Sbjct: 1   MDMKLNLLIVACFAVVL-FALFGGFSYFFPKVNPITIPPISVQPHEVMPNTSPRIVTQEV 59

Query: 46  PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKG 86
           P         +      + L +   +++        I+  G
Sbjct: 60  PTPEPAETTEIAPSVPEEGLLIVHFIDVGEGDAALIISPYG 100


>gi|15807391|ref|NP_296122.1| hypothetical protein DR_2401 [Deinococcus radiodurans R1]
 gi|6460226|gb|AAF11954.1|AE002071_8 hypothetical protein DR_2401 [Deinococcus radiodurans R1]
          Length = 131

 Score = 38.4 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 23/68 (33%), Gaps = 4/68 (5%)

Query: 7  YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66
            +A+AL  + +  W      PR  +  + +      +      +S           + +
Sbjct: 10 LLIALALFWVGLLLW----TQPRSTQPRSTQSRSTQTRSTQTRSSSPRPTPPRQAPPSST 65

Query: 67 MSPRVELK 74
            PR+ +K
Sbjct: 66 PEPRIPVK 73


>gi|169604772|ref|XP_001795807.1| hypothetical protein SNOG_05401 [Phaeosphaeria nodorum SN15]
 gi|160706638|gb|EAT87792.2| hypothetical protein SNOG_05401 [Phaeosphaeria nodorum SN15]
          Length = 277

 Score = 38.0 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 74/254 (29%), Gaps = 63/254 (24%)

Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393
           I     ++ A P+   ++    +      A    ++  + +     ++        + ++
Sbjct: 5   IHTSVPWYAAIPLTAFITRAALVTTFGAWA---RSLMARYIGLQPLRQALAFQKRDEILK 61

Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453
                  ++   +  + + +   +L K  N+         + QIP+FFA+ + I      
Sbjct: 62  TASFRTPKEASLAVKKEVNEVTAKLDKRWNVTLKGQLGWTIGQIPIFFAMAETIRQKCAA 121

Query: 454 RH-----------------------------------APFWGWIKDLAAADPTNIFTLFG 478
           R                                         W  DL   DPT       
Sbjct: 122 REGLMGLGFSAFRGEDAQAAVGEVAVNTSKWFEPSLATEGMLWFPDLLIPDPT------- 174

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK------GQAMILNWMPVVFVFALS 532
                       G+ P ++S  MF  + ++    +            L  + ++      
Sbjct: 175 ------------GVLPFVVSGLMFTNIYITKNTVENGASWPLAIRRTLLAVSLLVGPLCQ 222

Query: 533 SFPAGLIIYWSWSN 546
           + PA L++YW+ S 
Sbjct: 223 NMPAALMLYWASST 236


>gi|70991176|ref|XP_750437.1| mitochondrial export translocase Oxa2 [Aspergillus fumigatus Af293]
 gi|66848069|gb|EAL88399.1| mitochondrial export translocase Oxa2, putative [Aspergillus
           fumigatus Af293]
          Length = 342

 Score = 38.0 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 6/54 (11%)

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEI--GLIDRLRSTF----SKNYNSQ 581
            P+ L+IYW  S  I+ +Q  ++ +   ++       ++   +     K   S+
Sbjct: 282 MPSALMIYWISSTNIATLQTFLLERFMLSKPLLEPWRQIHIGYPQKGEKTPPSK 335


>gi|229155265|ref|ZP_04283376.1| hypothetical protein bcere0010_14580 [Bacillus cereus ATCC 4342]
 gi|228628190|gb|EEK84906.1| hypothetical protein bcere0010_14580 [Bacillus cereus ATCC 4342]
          Length = 290

 Score = 38.0 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I +I+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVTISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +  +  
Sbjct: 64  DGKAYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159


>gi|302670485|ref|YP_003830445.1| polysaccharide ABC transporter ATP-binding/permease [Butyrivibrio
           proteoclasticus B316]
 gi|302394958|gb|ADL33863.1| polysaccharide ABC transporter ATP-binding/permease protein
           [Butyrivibrio proteoclasticus B316]
          Length = 663

 Score = 38.0 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 33/150 (22%)

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
           +       L    P L+   V+ A+Y+V     E R      WI+     +   I  +  
Sbjct: 379 WDKVRDYYLKTFLPKLVLWEVWVAVYQVFLYVWEGRPITAGVWIR-----EALLIKYIDM 433

Query: 479 ILPFYLPGFMHVGIW-PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL------ 531
              +    F+ + I  P I         +            ++  +  VF+F        
Sbjct: 434 GNLWTARFFILLMILAPFIGGTLQMFSARAL---------RMMLIILWVFMFMFPGFDMY 484

Query: 532 -------SSFP--AG---LIIYWSWSNVIS 549
                   SFP  +G    + Y+   N+IS
Sbjct: 485 GVANGGEGSFPFYSGTVCYVFYFCAGNMIS 514


>gi|47566074|ref|ZP_00237112.1| lacX protein [Bacillus cereus G9241]
 gi|47556991|gb|EAL15321.1| lacX protein [Bacillus cereus G9241]
          Length = 290

 Score = 38.0 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 72  ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122
            ++N  +I +I+ KGA+   + L+     Y     S      +PI+  +      N Y+ 
Sbjct: 4   TIQNEKVIVTISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181
           +    S   +    +        S   +T                FE  +S + +  +  
Sbjct: 64  DGKAYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123

Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217
           +   V N +  ++ FS       + P     +F   
Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159


>gi|241888770|ref|ZP_04776076.1| S-layer protein [Gemella haemolysans ATCC 10379]
 gi|241864446|gb|EER68822.1| S-layer protein [Gemella haemolysans ATCC 10379]
          Length = 373

 Score = 38.0 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/168 (8%), Positives = 43/168 (25%), Gaps = 11/168 (6%)

Query: 25  YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINL 84
              P  E      + +         +      +            +VE+KN  L+G+++ 
Sbjct: 124 VEKPLKESSEKPIEKLSVKPTEKPTEQPPGNPIEKSTTNTSETISKVEIKNDVLVGNLS- 182

Query: 85  KGAQFDDLNLRG--------YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELP 136
              +   ++ +         Y   ++ N    T+     +        +     N+  + 
Sbjct: 183 --GREIKVSFKKDSVSAEKLYVESLNDNELNQTIKYKLGSDYNIIETFEIHFEKNDKRVD 240

Query: 137 NSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184
           ++      ++               + N +    +        F I  
Sbjct: 241 SNVERTVTVAVVKKDNAELEVYHITDENTLEKVNSSYSTGELKFNINH 288


>gi|251778908|ref|ZP_04821828.1| TPR-repeat-containing protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243083223|gb|EES49113.1| TPR-repeat-containing protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 423

 Score = 38.0 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 28/243 (11%), Positives = 67/243 (27%), Gaps = 22/243 (9%)

Query: 8   FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67
            +A+ L V I   +  F    ++    N+  + ++  +  +  NS   V+ +++ ++ S 
Sbjct: 181 IIALVLVVFICGTFYVFKEKFKVNLKENDNMSTESSNKAEENSNSSENVVNEEQKESESK 240

Query: 68  SPRVELK--NPSLIGSINLKG-----AQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
           +P   +   N      IN           D++           +   V     S+     
Sbjct: 241 TPDTTIDEQNKKAQLDINKLSEHFENGDIDNIY---------YDLQNVNEQDISDEYKGL 291

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180
           +     +   + IE+     +                  +  +     +  I     +  
Sbjct: 292 YRRCVNLLKTSGIEVFYGKGMEEFNIQNYEKANIEFSKAYDYSEGSYLKEHI----MFYK 347

Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240
            +     NN  + I+          K   A N        +            Y++  + 
Sbjct: 348 AVTLEQLNNFDEAIKLYELYYAEYPKGSYADNVL--YNLSLMFNNTDREKSIYYANKLRD 405

Query: 241 SIS 243
             S
Sbjct: 406 DFS 408


>gi|304436978|ref|ZP_07396941.1| RND family efflux transporter [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304369929|gb|EFM23591.1| RND family efflux transporter [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 370

 Score = 38.0 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/170 (8%), Positives = 47/170 (27%), Gaps = 17/170 (10%)

Query: 5   WNYFVAI-ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK---QPNQVDNSYAAVLIDD 60
               + I AL++ ++     +Y      +   +  +          + V+ +     +D 
Sbjct: 3   KRTIIGIGALTMALIAGGSYWYYTQSAAQEAAKAVSTVDAARMNIKSTVEATGTIRPVDS 62

Query: 61  RAQALSMSPRVEL----KNPSLIGSINLKGAQFDDLNL--RGYHLDVSSNSPIVTLLSPS 114
              +  ++ R+      +N ++         Q     L  + Y          VT     
Sbjct: 63  VEVSSKITARISSVLVKENDTVTA------GQIV-ATLDGKDYEAKRDQAQYRVTNTRAK 115

Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164
             + +Y   +   S ++  +   +         +  +      +    + 
Sbjct: 116 YNRMSYLESIGAKSKSDLEDAEYNYDTAQSTLEEANSDANETIITAPISG 165


>gi|297816138|ref|XP_002875952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321790|gb|EFH52211.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 330

 Score = 38.0 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 39/203 (19%)

Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418
           N+  +I+L T+ ++ +  PL        + +  +        E    +     +    +L
Sbjct: 135 NWWASIVLATLLIRGVTIPLMIDNERWRSRIMMLGIHSTASMETKDPAALAEHRIEFDKL 194

Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478
            K +       C+ I             ++  +         W  DL   D + IF    
Sbjct: 195 LKNN------SCFQI-----------SNMTEEVASFKTGGVLWFTDLTTHDTSLIF---- 233

Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPVVFVFALSSFP 535
                          P++  L+ +I ++               +   M +          
Sbjct: 234 ---------------PLLTWLTFWIMIEYDATVGLEGAMIPKKLTRIMVIPMFVVAIMVS 278

Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558
            G+  Y     + SI    VI +
Sbjct: 279 KGVHCYLMSCMMFSIAYMLVIRR 301


>gi|296534911|ref|ZP_06897225.1| hypothetical protein HMPREF0731_2707 [Roseomonas cervicalis ATCC
          49957]
 gi|296264759|gb|EFH11070.1| hypothetical protein HMPREF0731_2707 [Roseomonas cervicalis ATCC
          49957]
          Length = 52

 Score = 38.0 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 14/50 (28%)

Query: 2  ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN 51
                  AIA+S+ I+ A+  +         +      Q    P     
Sbjct: 1  MDQKRLLAAIAISIGILLAFDLWKRETTPPAPDAPAAVTQQAPTPTAPAA 50


>gi|228902904|ref|ZP_04067045.1| hypothetical protein bthur0014_40720 [Bacillus thuringiensis IBL
          4222]
 gi|228856688|gb|EEN01207.1| hypothetical protein bthur0014_40720 [Bacillus thuringiensis IBL
          4222]
          Length = 223

 Score = 38.0 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 27/65 (41%)

Query: 6  NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
          N  +AI L ++ + A+Q F    + +  + ++K  Q   +  +   S        + +  
Sbjct: 26 NIAIAIVLLLVAIVAYQLFVPSTKEQASSTDKKVSQQTTKNEKAGKSEDKESAKKKEKEQ 85

Query: 66 SMSPR 70
          + + +
Sbjct: 86 AEAKQ 90


>gi|160890504|ref|ZP_02071507.1| hypothetical protein BACUNI_02946 [Bacteroides uniformis ATCC 8492]
 gi|156860236|gb|EDO53667.1| hypothetical protein BACUNI_02946 [Bacteroides uniformis ATCC 8492]
          Length = 1073

 Score = 38.0 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 22/213 (10%), Positives = 47/213 (22%), Gaps = 10/213 (4%)

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
                   A +      V    P    + + +         + +   ++   P       
Sbjct: 750 KEATAQQPATSKEEGNLVAFSGPDFKATFDKQSGLLTSYLYKKHEYILNGQGPRP-FFWR 808

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
           + T N Y A L     A            +         TT             +  T  
Sbjct: 809 APTDNDYGANLPVRLKAWKEASYQEPKAESFQVTPGSNATTVKVTYRFPQTEARWNITYK 868

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV--- 230
           +    + K+ +               G  M+        T+  +         ++     
Sbjct: 869 IYASGVIKVDNRFMAEGDQAPMIPRVGLRMQLPESFTDLTYYGRGPKENYRDRRTSQFIG 928

Query: 231 ------EQKYSDIEKSSISNFHESNSWLGISDK 257
                 +  Y    +   +N      W  ++DK
Sbjct: 929 EYAIPVKDMYEPYVRPQENNHRTDIYWCALTDK 961


>gi|119719842|ref|YP_920337.1| hypothetical protein Tpen_0933 [Thermofilum pendens Hrk 5]
 gi|119524962|gb|ABL78334.1| hypothetical protein Tpen_0933 [Thermofilum pendens Hrk 5]
          Length = 544

 Score = 38.0 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 38/372 (10%), Positives = 86/372 (23%), Gaps = 34/372 (9%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M    + F+A    + +  A          E            K P    ++   ++ D 
Sbjct: 1   MMNKKHLFLAAIAVLALFLA------TASAEPALRSWSGTPPPKAPGITVSAGEVIITDP 54

Query: 61  RAQALSMSP-----RVELKNPSLIGSINLKGAQFDDLNLR-GYHLDVSSNSPIVTLLSPS 114
                          +      L   +   G     L LR  +    +  SP V ++   
Sbjct: 55  PNDQYKYYRPDWNWPITSDLDVLEARLYSDG---QYLYLRFKFQTLKNKYSPYVMVVMDF 111

Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174
              N       ++   ++ +LP                   + L        +F+ + + 
Sbjct: 112 TPDNPNDGFDYWLPDWSDTKLPWKW-----------DAIVGVNLGKYETQPFVFDHSWNP 160

Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
                 ++                 G  +  K +     F    G I   G K   + + 
Sbjct: 161 KPVGQLEVDQQNAVIEAKVPVSELPGFPLNGKVKVVILVFANDYGGIWDPGKKKAYDPEV 220

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
                 S           G +  Y       S      + +  ++     + +       
Sbjct: 221 GVWIDDSFFYASNVYDIAGQTPTYAEVYGGWSNGVQEVAVYYTVTTSQGTFTSTTL---- 276

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354
               G+ ++    L      +P +    +  +         +G     A         + 
Sbjct: 277 ----GRKVSYARSLVPMKLIYPPLPGSLRAWSGKPLPPAPGYGVVDNEAVLTDPAGDQYK 332

Query: 355 NLVGNFGIAIML 366
               ++   I  
Sbjct: 333 YYRPDWNWPITS 344


>gi|296330754|ref|ZP_06873230.1| bacteriophage SPP1 receptor [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305675773|ref|YP_003867445.1| bacteriophage SPP1 receptor [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296152068|gb|EFG92941.1| bacteriophage SPP1 receptor [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305414017|gb|ADM39136.1| bacteriophage SPP1 receptor [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 1077

 Score = 38.0 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 21/180 (11%), Positives = 52/180 (28%), Gaps = 5/180 (2%)

Query: 1   MERNWNYFV----AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M       +    A+ + +++   +  F      ++  N  + I  V +   V +     
Sbjct: 1   MTEQRKSLIKLISAVIIILLLPVLFFRFIGDDPTKKAVNSTRQIAVVNEDTGVLSDEVKS 60

Query: 57  LIDDRAQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
             +D++          L + P+   ++  + A    L  + Y   V   S     +   +
Sbjct: 61  DEEDKSAQFGKEVATVLGERPNYSWTVVNRSAAETGLASKKYDAIVYIPSDFSKNILSYD 120

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
             +   A L++    N   +        L   +         L +   +  +       D
Sbjct: 121 KDHPQKATLEFSIQDNLNAVNKEKVQRELEDAQKTMNKKMSALYWNFVSQKVDNIRGEFD 180


>gi|229125984|ref|ZP_04255008.1| hypothetical protein bcere0015_4470 [Bacillus cereus BDRD-Cer4]
 gi|228657467|gb|EEL13281.1| hypothetical protein bcere0015_4470 [Bacillus cereus BDRD-Cer4]
          Length = 1026

 Score = 38.0 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 35/342 (10%), Positives = 93/342 (27%), Gaps = 37/342 (10%)

Query: 1   MERNWN-----YFVAIALS--VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53
           M++N         +A ALS    +       Y  P +  +  E        +    D   
Sbjct: 1   MKQNKRKRINAMIIAAALSLPFAV-------YSTPALAAVAIEVNKTGQGLEDGTYDAVI 53

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
            A       ++++    V +K+P L       G +     L        S+S     L  
Sbjct: 54  KAYKDKTNEESMAA---VYIKDPKLTIE---NGKKIVTATL--------SDSDFFQYLKT 99

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
            +           V + +  +       + +              +   + +  ++    
Sbjct: 100 EDIHTPGVFHDVKVISEDKKKNGTKVIQFEVGELGKRYNMRMHIYIPTMSYDNKYQVQFE 159

Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233
           ++          + NN  ++ + +   +   +                 +  D       
Sbjct: 160 VN-------TLNLENNVPEKQKENKEEQQDENGNVILDKQLQKYINKYNLNRDNVDAPIT 212

Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVF--IPSKETSFHSQFKYLSDGHARYQAKFSA 291
             D+ +    + +       I+   + +    +  ++++             +Y    S 
Sbjct: 213 KKDLLQIKTLSIYSGKGINKITGLEYMTNLEKLTLRKSNVKDISAISKLRGLKYVDLTSN 272

Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
           +  +I P + +   N LF    +   +    K   I   +++
Sbjct: 273 SIESIHPIEQLENINMLFLRDNKISDLTPLSKMKKIKTLDLI 314


>gi|189465247|ref|ZP_03014032.1| hypothetical protein BACINT_01592 [Bacteroides intestinalis DSM
           17393]
 gi|189437521|gb|EDV06506.1| hypothetical protein BACINT_01592 [Bacteroides intestinalis DSM
           17393]
          Length = 404

 Score = 38.0 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 68/252 (26%), Gaps = 15/252 (5%)

Query: 9   VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS 68
           + IA S  ++ A   FYV+ R +E N      Q++K  + V          D    L+ +
Sbjct: 95  LIIAASFALLIASSIFYVWERNKENNELFMIAQSIKPDSVVS---------DVQLVLANN 145

Query: 69  PRVELKNPSLIGSINLKGAQ-FDDLNLRGYHLDVSSNSPIVTLLSPSNT---KNAYFAEL 124
             + + N  +    + KG    +D  L+  +         V LL   N         + L
Sbjct: 146 EYISINNKKIDIQYDQKGNIHINDKKLKQENSATPQKEKDVALLHKINQLIVPKGRRSTL 205

Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184
            +           S  V+                 +   +       I        K++ 
Sbjct: 206 TFSDGTVLWVNSGSRVVYPEQFEAKQREIYIDGEAYLQVSPDKSRPFIVKTNKIDIKVLG 265

Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244
           T  N +  +        ++    +  ++    +   +           + +  +      
Sbjct: 266 TTFNITAYEEDDRQAVALVEGSVEIISDK--KKLAALTPNDLFQYKNGQINIEQTDITQY 323

Query: 245 FHESNSWLGISD 256
                 W     
Sbjct: 324 ISWVEGWYIFES 335


>gi|324516773|gb|ADY46631.1| FMRFamide receptor [Ascaris suum]
          Length = 416

 Score = 38.0 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 37/119 (31%), Gaps = 9/119 (7%)

Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD--PTNIFTLFGILPFYLPGFM 488
             ++L   + + + +    ++E+       + ++L   D  P  +   F          +
Sbjct: 132 LLVVLICAILYNLVRFFEYTIEVTPEGDTVYARNLRDPDLYPYYMIGYFTASYLITHFLI 191

Query: 489 HVGIWPIIMS---LSMFIQMKMSPPPADKGQA----MILNWMPVVFVFALSSFPAGLII 540
             GI  ++      SM    +       + Q       +  M  V     ++ P  L +
Sbjct: 192 PFGIIIVMNGHVCCSMITLRRARLALTRQQQREYSTTFMLMMVTVMFALCNTLPFILNL 250


>gi|27468831|ref|NP_765468.1| putative aldose 1-epimerase [Staphylococcus epidermidis ATCC 12228]
 gi|57867822|ref|YP_189486.1| aldose 1-epimerase [Staphylococcus epidermidis RP62A]
 gi|251811959|ref|ZP_04826432.1| aldose 1-epimerase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875249|ref|ZP_06284122.1| aldose 1-epimerase [Staphylococcus epidermidis SK135]
 gi|293367047|ref|ZP_06613719.1| aldose 1-epimerase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|27316379|gb|AAO05554.1|AE016750_159 putative aldose 1-epimerase [Staphylococcus epidermidis ATCC 12228]
 gi|57638480|gb|AAW55268.1| aldose 1-epimerase [Staphylococcus epidermidis RP62A]
 gi|251804558|gb|EES57215.1| aldose 1-epimerase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296014|gb|EFA88535.1| aldose 1-epimerase [Staphylococcus epidermidis SK135]
 gi|291318777|gb|EFE59151.1| aldose 1-epimerase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329733895|gb|EGG70219.1| aldose 1-epimerase [Staphylococcus epidermidis VCU028]
 gi|329735080|gb|EGG71376.1| aldose 1-epimerase [Staphylococcus epidermidis VCU045]
          Length = 336

 Score = 38.0 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 28/292 (9%), Positives = 65/292 (22%), Gaps = 20/292 (6%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128
             +++ N          GA+        YH         + L +       YF E     
Sbjct: 13  DLIKIDNDDTKIVFTNYGARIVSW---KYH------DNNIVLGNVVEADEFYFEEPFNFG 63

Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS----LDEHYLFKIVD 184
                           +        +       +  +    R I     +D+    KI+ 
Sbjct: 64  ATIGRYAGRIENASFKLDDDTFQLESNDGQHHLHGGSHGLNRRIFDYEIVDDIGQVKIIF 123

Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244
           T T    +          + H            E         +     Y ++ + +   
Sbjct: 124 TTTIKEEEDNYPGDMMVKVIHTYDANHRWSVQYEAKSTKKTVFNPSNHVYFNLNRDNNVV 183

Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304
           ++   +   +                   + + L         K    +I     +++  
Sbjct: 184 YNHCINSSALK-------MYMLNNKHIVKEGQSLDLHRLLDTNKVYLKDIFESDNETLQQ 236

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
               + G          E  +    FE+ I     +F+         +  + 
Sbjct: 237 QINHYNGIDHPFEFGGNELTIDNSEFELNIKTDMPHFVMFTFNDPQVWNNDF 288


>gi|300697031|ref|YP_003747692.1| hypothetical protein RCFBP_mp10489 [Ralstonia solanacearum
           CFBP2957]
 gi|299073755|emb|CBJ53276.1| conserved exported protein of unknown function [Ralstonia
           solanacearum CFBP2957]
          Length = 796

 Score = 38.0 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 54/209 (25%), Gaps = 9/209 (4%)

Query: 96  GYHLDVSSNSPIVTL----LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151
            Y    ++    V L    ++      AY+   D + T   I   N+  VW         
Sbjct: 486 EYDQSGNAIQETVYLGDTPIATVKNGTAYYIYADQIDTPRVITDTNNLMVWRWDQTDPFG 545

Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211
            T P +      +   F   +               N  +++   S  GR ++  P    
Sbjct: 546 ATLPDE---NPTSLGAFTYNLRFPGQVYDAETGKHYN--VNRDYDSASGRYIQSDPIGLN 600

Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271
                   +              +      ++     N W   S  ++    IP     F
Sbjct: 601 GGQWSTYAYAGGNPVSLSDPSGLTVAISGHVAGGPIGNYWTTPSSYHFGIALIPDNPGDF 660

Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGK 300
            ++  +  DG+            +   G 
Sbjct: 661 PNRTGWAQDGNNIVATVGGQPSGSFGNGN 689


>gi|329726451|gb|EGG62914.1| aldose 1-epimerase [Staphylococcus epidermidis VCU144]
          Length = 336

 Score = 38.0 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 28/292 (9%), Positives = 65/292 (22%), Gaps = 20/292 (6%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128
             +++ N          GA+        YH         + L +       YF E     
Sbjct: 13  DLIKIDNDDTKIVFTNYGARIVSW---KYH------DNNIVLGNVVEADEFYFEEPFNFG 63

Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS----LDEHYLFKIVD 184
                           +        +       +  +    R I     +D+    KI+ 
Sbjct: 64  ATIGRYAGRIENASFKLDDDTFQLESNDGQHHLHGGSHGLNRRIFDYEIVDDIGQVKIIF 123

Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244
           T T    +          + H            E         +     Y ++ + +   
Sbjct: 124 TTTIKEEEDNYPGDMMVKVIHTYDANHRWSVQYEAKSTKKTVFNPSNHVYFNLNRDNNVV 183

Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304
           ++   +   +                   + + L         K    +I     +++  
Sbjct: 184 YNHCINSSALK-------MYMLNNKHIVKEGQSLDLHRLLDTNKVYLKDIFESDNETLQQ 236

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
               + G          E  +    FE+ I     +F+         +  + 
Sbjct: 237 QINHYNGIDHPFEFGGNELTIDNSEFELNIKTDMPHFVMFTFNDPQVWNNDF 288


>gi|251788831|ref|YP_003003552.1| multidrug efflux system subunit MdtA [Dickeya zeae Ech1591]
 gi|247537452|gb|ACT06073.1| efflux transporter, RND family, MFP subunit [Dickeya zeae
          Ech1591]
          Length = 419

 Score = 37.7 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 19/70 (27%), Gaps = 2/70 (2%)

Query: 1  MERNW--NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58
          M       + + I +    ++AW+ F                 + +  N+  +       
Sbjct: 1  MNAARLFRFLILIVIIAAALFAWRYFRPSQSESANEATTSQQASRQGQNRNGSGRRGSTA 60

Query: 59 DDRAQALSMS 68
              QA   S
Sbjct: 61 PPPVQAAFSS 70


>gi|228987629|ref|ZP_04147743.1| hypothetical protein bthur0001_42990 [Bacillus thuringiensis
          serovar tochigiensis BGSC 4Y1]
 gi|229157993|ref|ZP_04286064.1| hypothetical protein bcere0010_41720 [Bacillus cereus ATCC 4342]
 gi|228625446|gb|EEK82202.1| hypothetical protein bcere0010_41720 [Bacillus cereus ATCC 4342]
 gi|228772089|gb|EEM20541.1| hypothetical protein bthur0001_42990 [Bacillus thuringiensis
          serovar tochigiensis BGSC 4Y1]
          Length = 217

 Score = 37.7 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 25/47 (53%)

Query: 6  NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS 52
          N  +AI L ++ + A+Q F    + +  ++++K  Q   + N+ + +
Sbjct: 21 NIAIAIVLILVAIVAYQLFVPDTKEQASSSDKKVAQQTTKENKSEKA 67


>gi|314935902|ref|ZP_07843252.1| putative hydrolase [Staphylococcus hominis subsp. hominis C80]
 gi|313655908|gb|EFS19650.1| putative hydrolase [Staphylococcus hominis subsp. hominis C80]
          Length = 286

 Score = 37.7 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 20/180 (11%), Positives = 51/180 (28%), Gaps = 10/180 (5%)

Query: 77  SLIGSINLKG--AQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY----VSTA 130
            + G I+  G     +D  L  + L + S   IV L   +  ++ Y+    +    +S  
Sbjct: 62  KVDGVISSNGTRGDIEDKLLFKHSLTIDSVKKIVQL---AQQQHIYYEVFPFEGDRISLI 118

Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190
            +               ++       +    N       + I  D +    + +   N  
Sbjct: 119 EDQSWMEDMIDSEHPQNEVSESEWKSRRDAMNGKINW-RKDIPNDAYSKIYLFNKKLNKI 177

Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250
                   + +++ +   + ++ F  +     V     + E       K   +     + 
Sbjct: 178 KTFRDELIQNKVLLNISVSNSSRFNAETMAYQVDKGTGIKEMIDHFDIKQEETLVIGDSD 237


>gi|229163325|ref|ZP_04291277.1| hypothetical protein bcere0009_40910 [Bacillus cereus R309803]
 gi|228620106|gb|EEK76980.1| hypothetical protein bcere0009_40910 [Bacillus cereus R309803]
          Length = 217

 Score = 37.7 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 25/65 (38%)

Query: 6  NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
          N  +AI L ++ + A+Q F    + +  + E+K  Q   +  +   S      +   +  
Sbjct: 21 NIAIAIVLLLVAIVAYQLFVPNTKEQASSTEKKVSQQTTKNEKSGKSEDKEDKEATKKKE 80

Query: 66 SMSPR 70
              +
Sbjct: 81 QAEAK 85


>gi|229169121|ref|ZP_04296836.1| hypothetical protein bcere0007_40730 [Bacillus cereus AH621]
 gi|228614349|gb|EEK71459.1| hypothetical protein bcere0007_40730 [Bacillus cereus AH621]
          Length = 222

 Score = 37.7 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%)

Query: 6  NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
          N  +AI L  + + A+Q F    + +  +N++K  Q   + N+ + +          Q
Sbjct: 21 NIAIAIVLVAVAIVAYQLFVPDTKEQASSNDKKVAQQTTKENKAEKAKGKEEPKKNEQ 78


>gi|326938269|gb|AEA14165.1| internalin protein [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 1012

 Score = 37.7 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 40/341 (11%), Positives = 98/341 (28%), Gaps = 35/341 (10%)

Query: 1   MERNWN-----YFVAIALS--VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53
           M++N         +A ALS    +       Y  P +  +  E        +    D   
Sbjct: 1   MKQNKRKRINAMIIAAALSLPFAV-------YSTPALAAVAIEANKTGQGLKDGTFDAVI 53

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
            A       ++++    V +K+P L       G +     L        S+S     L  
Sbjct: 54  KAYKDKTNEESMAA---VYIKDPKLTIE---NGKKIVTATL--------SDSDFFQYLKT 99

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173
            +           V + +  +       + +              +   A +  ++    
Sbjct: 100 EDIHTPGVFHDVKVISEDKKKNGTKVIQFEVGELGKRYNMRMHIYIPTMAYDNKYQVQFE 159

Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232
           ++  +    + +    N  ++   +    + +   +        ++   A +  K L++ 
Sbjct: 160 VNTLNLENNVPEKQKENKEEKQDENGNVILDKQLQKYINKYNLDRDNVDAPITKKDLLKI 219

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292
           K   I      N      ++   +K      +  +E++             +Y    S +
Sbjct: 220 KTLSIYSGKGINEITGLEYMTNLEK------LTLRESNVKDISAISKLRGLKYVDLTSNS 273

Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333
             +I P + +   N LF    +   +    K   I   +++
Sbjct: 274 IESIHPIEQLENINMLFLRDNKISDLTPLSKMKKIKTLDLI 314


>gi|322373354|ref|ZP_08047890.1| serine/threonine protein kinase Stk1 [Streptococcus sp. C150]
 gi|321278396|gb|EFX55465.1| serine/threonine protein kinase Stk1 [Streptococcus sp. C150]
          Length = 621

 Score = 37.7 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 51/185 (27%), Gaps = 17/185 (9%)

Query: 7   YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66
            F+ +    II++A+  F      +  N   + + T +   +        + +    ++ 
Sbjct: 344 VFLGLVFIGIIIFAYLVFTNPDNAQVPNVVGQELSTAQTKLESAGFKVGDVKEVEDDSVD 403

Query: 67  MSPRVELKNPSLIGSINLKGAQFD--------DLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                 +K     G+   +G   D           L+ Y      ++         +  +
Sbjct: 404 KGK--VIKTDPTAGTTRKEGTSIDVYVSSGDKGFTLKDYKGKNYKDA-------VKDLTS 454

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            Y    D +   N  +           S        P     K    +   +TI++ +  
Sbjct: 455 NYGVSEDQIDIQNVEDDSADEGEILSQSPGKNKTFNPKDSKAKIKFRVATPKTITMPDVT 514

Query: 179 LFKIV 183
              + 
Sbjct: 515 GLTVS 519


>gi|218235426|ref|YP_002365348.1| internalin protein [Bacillus cereus B4264]
 gi|218163383|gb|ACK63375.1| internalin protein [Bacillus cereus B4264]
          Length = 994

 Score = 37.7 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 35/360 (9%), Positives = 92/360 (25%), Gaps = 38/360 (10%)

Query: 1   MERNWN-----YFVAIALS--VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53
           M++N         +A ALS    +       Y  P +  +  E        +    D   
Sbjct: 1   MKQNKRKRINAMIIAAALSLPFAV-------YSTPALAAVAIEANKTGQGLEDGTYDAVI 53

Query: 54  AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113
            A       ++++    V +K+P L       G +     L        S+S     L  
Sbjct: 54  KAYKDKTNEESMAA---VYIKDPKLTIE---NGKKIVTATL--------SDSDFFQYLKT 99

Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLIS----GKILTPTTPIKLVFKNANNILFE 169
            +           V + +  +       + +        +        + + N   + FE
Sbjct: 100 EDIHTPGVFHDVKVISEDKKKNGTKVIQFEVGELGKRYNMRMHIYIPTMAYDNKYQVQFE 159

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
                 +  +        N      +      + +   +        +E     +  + L
Sbjct: 160 VNTLNLDKDVP--EAQKENKEDKVDQQDANVIVDKQLQRHINKYNLNRENLDTPITKEDL 217

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289
           ++ K   + ++      + +    +++          +    + +F             +
Sbjct: 218 LKVKSLIVVEAKSKGIKDVSGLEYMTN---LENLTLEEVKLKNIKFISDLRQLKSLSITY 274

Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349
                 I P   +    FL     +   +    +   I   ++  ++         +  L
Sbjct: 275 -GELEDIGPLAKLEHIEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKDIKPLFTVKSL 333


>gi|262371082|ref|ZP_06064404.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262313968|gb|EEY95013.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 232

 Score = 37.7 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 4/110 (3%)

Query: 7   YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66
               I +++I  + WQ +      E   N  K  Q + +           L     + + 
Sbjct: 24  IISGILIALIAFFGWQYWQKKTLAENQMNTAKVQQLMDEARATQGDAFTALSATADKIVK 83

Query: 67  MSPRV--ELKNPSLIGSINLKGAQFDDLN--LRGYHLDVSSNSPIVTLLS 112
            +P     ++   L+  +    A +      L+        +  +V ++ 
Sbjct: 84  EAPDSAQAIQTQLLMAKLAYDKADYASAEKALKKVENSKVDDDGLVQIVK 133


>gi|229917626|ref|YP_002886272.1| major facilitator transporter [Exiguobacterium sp. AT1b]
 gi|229469055|gb|ACQ70827.1| major facilitator transporter [Exiguobacterium sp. AT1b]
          Length = 375

 Score = 37.7 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 65/215 (30%), Gaps = 17/215 (7%)

Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398
            +  +     +    +       I ++   V + L F   A  Q +  +  +    K   
Sbjct: 25  TWIASAGFEHVDMALFGYYIAAVICMIGMVVRLTLFFARPATSQVLKRSLKQMKAEKKRA 84

Query: 399 LREK----FKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL-LQIPVFFAIYKVISISLEM 453
            +            Q           T ++    GC     +   + F   +   I +E 
Sbjct: 85  GKAVATTTVNNIVLQKFIWERGWYRWTQHMLIAWGCLGSFAITFGLTFQWMRFDLIDIET 144

Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513
                +          PT      G+    +   +++    +++ + M +  +++     
Sbjct: 145 YQIVVFNI--------PTIKMAAHGLFAELVYNGLNITALMLLVGVLMALYRRINDQDVK 196

Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548
             Q    + +P++ +    +  +GL++  + S V 
Sbjct: 197 VTQRFEFDILPLLMLLI-VTV-SGLLL--TVSYVF 227


>gi|75761027|ref|ZP_00741029.1| hypothetical protein RBTH_04596 [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74491483|gb|EAO54697.1| hypothetical protein RBTH_04596 [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 240

 Score = 37.7 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 27/65 (41%)

Query: 6   NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65
           N  +AI L ++ + A+Q F    + +  + ++K  Q   +  +   S        + +  
Sbjct: 43  NIAIAIVLLLVAIVAYQLFVPSTKEQASSTDKKVSQQTTKNEKAGKSEDKESAKKKEKEQ 102

Query: 66  SMSPR 70
           + + +
Sbjct: 103 AEAKQ 107


>gi|47566564|ref|ZP_00237386.1| conserved hypothetical protein protein [Bacillus cereus G9241]
 gi|47556594|gb|EAL14926.1| conserved hypothetical protein protein [Bacillus cereus G9241]
          Length = 217

 Score = 37.7 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 25/47 (53%)

Query: 6  NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS 52
          N  +AI L ++ + A+Q F    + +  ++++K  Q   + N+ + +
Sbjct: 21 NIAIAIVLILVAIVAYQLFVPDTKEQASSSDKKVAQQTTKENKSEKA 67


>gi|82753931|ref|XP_727875.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23483939|gb|EAA19440.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 1704

 Score = 37.7 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 37/358 (10%), Positives = 97/358 (27%), Gaps = 11/358 (3%)

Query: 94   LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153
            L+ Y ++   N     +L+P   K     + +      NI    +    +  +       
Sbjct: 930  LKSYPINYDENKGCFYMLNPEKNKMYKNYKYNIDRNNMNIIKLTNEVTEHFKNSFFFLDK 989

Query: 154  TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATN 212
              I            +  I  +++    +   + N+  +++        +   +P   ++
Sbjct: 990  IFIPKDAFFFVKDSEDVGIRNNKNKPVYVHHALVNDLKEEMTEQTVFDSLYSCEPPYKSD 1049

Query: 213  TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272
             +   +        +   E   +  E  S+ +F E+     +  K   ++   SK   F 
Sbjct: 1050 YYRYIQKKRIQNKIRKFKEYILNYYEFDSVEDFFETLLVFDVEHKKLITMLNSSKGDDFM 1109

Query: 273  SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332
                   + +A      + N               L        T     +       E 
Sbjct: 1110 DPLNNNYNKYANLCFNITKNIYEQ---------YRLLVDPNYDNTFKKENEINNFEIKEN 1160

Query: 333  LIDWGWFYF-IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391
              +  +F    A+ + + M      + +    I      +          +  +  N+  
Sbjct: 1161 GYNVEYFNLDSAETVKVKMENKRKNIKSNWSTIESQIGTIDSCNSDEHIAKTNTYINIDK 1220

Query: 392  IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449
            +   I+E+   +++       +  ++                L   P F +I +    
Sbjct: 1221 MDETIEEMSNMYEEFFNLGNTRKKVKEINIDTFKMFVENLGKLKGFPNFASINECFLG 1278


>gi|324511536|gb|ADY44798.1| Inner membrane protein COX18 [Ascaris suum]
          Length = 308

 Score = 37.7 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 53/163 (32%), Gaps = 23/163 (14%)

Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW- 459
           EK  +   +++++   +  + H +         +  IPV+      +   +     P   
Sbjct: 128 EKILRKSNEMVEEYTAKYLREHRLQASRIQNLKMCTIPVWIFSSFAVRNIITSDFHPNIE 187

Query: 460 --GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517
              W  +L   DP  I  +   +  +   +    ++PI M+   F +             
Sbjct: 188 GVLWFPNLLQPDPYFILPIAVGIFGFFNLWSQRRVYPIEMN--TFHRSYD---------- 235

Query: 518 MILNWMPVVFVFALSS----FPAGLIIYWSWSNVISIVQQAVI 556
                +   F     +     PA + +YW   +   I+Q  ++
Sbjct: 236 ----VLLAFFTLFAVNIMTDMPACIPLYWLMVSASGILQSLML 274


>gi|312863226|ref|ZP_07723464.1| putative serine/threonine-protein kinase PrkC [Streptococcus
           vestibularis F0396]
 gi|322516393|ref|ZP_08069318.1| non-specific serine/threonine protein kinase [Streptococcus
           vestibularis ATCC 49124]
 gi|311100762|gb|EFQ58967.1| putative serine/threonine-protein kinase PrkC [Streptococcus
           vestibularis F0396]
 gi|322125126|gb|EFX96519.1| non-specific serine/threonine protein kinase [Streptococcus
           vestibularis ATCC 49124]
          Length = 622

 Score = 37.7 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 20/185 (10%), Positives = 53/185 (28%), Gaps = 17/185 (9%)

Query: 7   YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66
            F+ +    II++A+  F     ++  N   + + T +   +        + +    ++ 
Sbjct: 344 VFLGLVFIGIIIFAYLVFTNPDNVQVPNVVGQELSTAQTKLESAGFKVGDVNEVENDSVD 403

Query: 67  MSPRVELKNPSLIGSINLKGAQFD--------DLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                 +K     G+   +G   D           L+ Y      ++         +  +
Sbjct: 404 KGK--VIKTDPTAGTTRKEGTSIDVYVSSGSKGFTLKNYKGKNYKDA-------IEDLTS 454

Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
            Y    D +   +  +           S +      P     K    +   +TI++ +  
Sbjct: 455 NYGVSEDQIDIQHVEDDDAKEGEILSQSPEKNKSFNPKDSKAKIKFRVATPKTITMPDVT 514

Query: 179 LFKIV 183
              + 
Sbjct: 515 GLTVS 519


>gi|119496407|ref|XP_001264977.1| mitochondrial export translocase Oxa2, putative [Neosartorya
           fischeri NRRL 181]
 gi|119413139|gb|EAW23080.1| mitochondrial export translocase Oxa2, putative [Neosartorya
           fischeri NRRL 181]
          Length = 279

 Score = 37.7 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 17/31 (54%)

Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564
            P+ L+IYW  S  I+ +Q  ++ +   ++ 
Sbjct: 225 MPSALMIYWISSTNIATLQTFLLERYMLSKP 255


>gi|332678398|gb|AEE87527.1| Protein-export membrane protein SecD [Francisella cf. novicida Fx1]
          Length = 645

 Score = 37.7 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 42/435 (9%), Positives = 112/435 (25%), Gaps = 29/435 (6%)

Query: 5   WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64
            N  + I L++ I YA  N +      +++ +  ++ T    +  +      +   +A  
Sbjct: 16  KNLLIVIVLALAIFYALPNVFGKSPALQISQKDGDVTTQLLVSVENTLAKDKISYQKADI 75

Query: 65  LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE 123
                 + +                 +  L+   +   S +   +  ++  +    + + 
Sbjct: 76  ADDKSNIAITFKD------------VEEQLKAKKVLKDSLSDDYIIAMNMLSNSPNWLSA 123

Query: 124 LDYVSTANNIELPNSNTVW-----NLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
           L        ++L     +             L  +  I L     N+I    +   +E  
Sbjct: 124 LGANPMNLGLDLRGGMYLMLEADTKTSIDAQLDNSLSIILSAAKDNSINISSSTKAEEKS 183

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
             K       N    I  +    + + K   +T+    Q+  I      + V   Y+  +
Sbjct: 184 TIKAPQNYLENGFVSITLANSADVDKLKQYLSTDFIKTQDPNIIYTNKGNTVFISYNSAK 243

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
              +     S     + ++      I +   +  S  +   +                  
Sbjct: 244 ILQLKQDAISQVVTVMRNR------INALGVAEASVAQAGDNRVVIEIPGLQDATQAKQI 297

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYN 355
               +T +F          +   E+   +   +    +  +Y     A      +     
Sbjct: 298 LGGTSTASFYLVNP-VADRLAAEEQGYKVYSLDNGRGYQSYYSLKGTAVAGGADIIGASP 356

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKA 414
            +       ++     +       +    +  N   +        + K K    + +   
Sbjct: 357 SIDRQTGTPIVMVELDRSAASHFRQITGKNIGNPMGVMLVNTTYEKVKDKDGKEKNVVSK 416

Query: 415 MIQLYKTHNINPLAG 429
             +L     I    G
Sbjct: 417 TEKLINVATIQSALG 431


>gi|332671327|ref|YP_004454335.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas fimi
           ATCC 484]
 gi|332340365|gb|AEE46948.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas fimi
           ATCC 484]
          Length = 268

 Score = 37.7 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 29/69 (42%)

Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441
                   +          ++  +  PQ LQ+A +QLY      PLAGC P+L Q PV  
Sbjct: 57  SQAKAEATRARLAPRIAALQRRHRHDPQELQRATMQLYADEGTTPLAGCLPMLAQAPVVG 116

Query: 442 AIYKVISIS 450
            IY V   +
Sbjct: 117 LIYAVFVHT 125


>gi|118497685|ref|YP_898735.1| preprotein translocase subunit SecD [Francisella tularensis subsp.
           novicida U112]
 gi|194323657|ref|ZP_03057433.1| protein-export membrane protein SecD [Francisella tularensis subsp.
           novicida FTE]
 gi|118423591|gb|ABK89981.1| preprotein translocase, subunit D, membrane protein [Francisella
           novicida U112]
 gi|194322021|gb|EDX19503.1| protein-export membrane protein SecD [Francisella tularensis subsp.
           novicida FTE]
          Length = 645

 Score = 37.7 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 42/435 (9%), Positives = 112/435 (25%), Gaps = 29/435 (6%)

Query: 5   WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64
            N  + I L++ I YA  N +      +++ +  ++ T    +  +      +   +A  
Sbjct: 16  KNLLIVIVLALAIFYALPNVFGKSPALQISQKDGDVTTQLLVSVENTLAKDKISYQKADI 75

Query: 65  LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE 123
                 + +                 +  L+   +   S +   +  ++  +    + + 
Sbjct: 76  ADDKSNIAITFKD------------VEEQLKAKKVLKDSLSDDYIIAMNMLSNSPNWLSA 123

Query: 124 LDYVSTANNIELPNSNTVW-----NLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
           L        ++L     +             L  +  I L     N+I    +   +E  
Sbjct: 124 LGANPMNLGLDLRGGMYLMLEADTKTSIDAQLDNSLSIILSAAKDNSINISSSTKAEEKS 183

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
             K       N    I  +    + + K   +T+    Q+  I      + V   Y+  +
Sbjct: 184 TIKAPQNYLENGFVSITLANSADVDKLKQYLSTDFIKTQDPNIIYTNKGNTVFISYNSAK 243

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
              +     S     + ++      I +   +  S  +   +                  
Sbjct: 244 ILQLKQDAISQVVTVMRNR------INALGVAEASVAQAGDNRVVIEIPGLQDATQAKQI 297

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYN 355
               +T +F          +   E+   +   +    +  +Y     A      +     
Sbjct: 298 LGGTSTASFYLVNP-VADRLAAEEQGYKVYSLDNGRGYQSYYSLKGTAVAGGADIIGASP 356

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKA 414
            +       ++     +       +    +  N   +        + K K    + +   
Sbjct: 357 SIDRQTGTPIVMVELDRSAASHFRQITGKNIGNPMGVMLVNTTYEKVKDKDGKEKNVVSK 416

Query: 415 MIQLYKTHNINPLAG 429
             +L     I    G
Sbjct: 417 TEKLINVATIQSALG 431


>gi|229175051|ref|ZP_04302569.1| hypothetical protein bcere0006_41330 [Bacillus cereus MM3]
 gi|228608419|gb|EEK65723.1| hypothetical protein bcere0006_41330 [Bacillus cereus MM3]
          Length = 215

 Score = 37.3 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 26/58 (44%)

Query: 6  NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
          N  +AI L ++ + ++Q F    + E  ++++K  Q   + N+ + +          Q
Sbjct: 21 NIAIAIVLILVAIVSYQLFVPERKEEASSSDKKVAQQTTKENKSEKAKGKEETKKNEQ 78


>gi|16080237|ref|NP_391064.1| bacteriophage SPP1 receptor [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221311129|ref|ZP_03592976.1| hypothetical protein Bsubs1_17301 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315456|ref|ZP_03597261.1| hypothetical protein BsubsN3_17217 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320372|ref|ZP_03601666.1| hypothetical protein BsubsJ_17185 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324656|ref|ZP_03605950.1| hypothetical protein BsubsS_17336 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|59802580|sp|O32101|YUEB_BACSU RecName: Full=Bacteriophage SPP1 adsorption protein yueB; AltName:
           Full=Bacteriophage SPP1 receptor protein yueB
 gi|2635681|emb|CAB15174.1| bacteriophage SPP1 receptor [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 1076

 Score = 37.3 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 34/351 (9%), Positives = 88/351 (25%), Gaps = 8/351 (2%)

Query: 1   MERNWNYFV----AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M       +    A+ + +++   +  F      ++  N  + I  V +   V +     
Sbjct: 1   MTEQRKSLIKLISAVIIILLLPVLFFRFIGDDPTKKAVNSTRQIAVVNEDTGVLSDEVKS 60

Query: 57  LIDDRAQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
             +D++          L + P    ++  + A    L  + Y   V   S     +   +
Sbjct: 61  DEEDKSAQFGKEVAAVLGERPDYSWTVVNRSAAETGLASKKYDAIVYIPSDFSKNILSYD 120

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
             +   A L++    N   +        L   +         L +   +  +       D
Sbjct: 121 KDHPQKATLEFSIQDNLNAVNKEKVQRELEDAQKTMNKKMSALYWNFVSQKVDNIRGEFD 180

Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234
           +          V  N          G I + K     +              +     + 
Sbjct: 181 KIVNKESEFQNVMYNFYKPSSNDLAGEIKQQK--DLIDELKKSMNEAQGTTKEKASTAEE 238

Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294
           +        +  E       + K        S +    +    +       Q     + +
Sbjct: 239 AKNTLKEFIDTVERYKEYQENQKKLLLAAQDSTQQQIRTGLDAIQAQQKANQFSERMSGL 298

Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345
               G++ T              +   +  L     + + +  +  F+++ 
Sbjct: 299 ATGIGQAKTQIGLTNLALNNAEKLRQNQVPLQEMGMKKIENDMFNAFLSRY 349


>gi|229013595|ref|ZP_04170726.1| hypothetical protein bmyco0001_40030 [Bacillus mycoides DSM 2048]
 gi|228747654|gb|EEL97526.1| hypothetical protein bmyco0001_40030 [Bacillus mycoides DSM 2048]
          Length = 216

 Score = 37.3 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%)

Query: 6  NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
          N  +AI L  + + A+Q F    + +  +N++K  Q   + N+ + +          Q
Sbjct: 21 NIAIAIVLVAVAIVAYQLFVPDTKEQASSNDKKVAQQTTKENKAEKAKGKEEPKKNEQ 78


>gi|229062073|ref|ZP_04199398.1| hypothetical protein bcere0026_41450 [Bacillus cereus AH603]
 gi|228717225|gb|EEL68900.1| hypothetical protein bcere0026_41450 [Bacillus cereus AH603]
          Length = 215

 Score = 37.3 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%)

Query: 6  NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
          N  +AI L  + + A+Q F    + +  +N++K  Q   + N+ + +          Q
Sbjct: 21 NIAIAIVLVAVAIVAYQLFVPDTKEQASSNDKKVAQQTTKENKAEKAKGKEEPKKNEQ 78


>gi|15924995|ref|NP_372529.1| hypothetical protein SAV2005 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|255006793|ref|ZP_05145394.2| hypothetical protein SauraM_10005 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|81774844|sp|Q931I5|LUKL2_STAAM RecName: Full=Uncharacterized leukocidin-like protein 2; Flags:
           Precursor
 gi|14247778|dbj|BAB58167.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50]
          Length = 351

 Score = 37.3 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 31/321 (9%), Positives = 79/321 (24%), Gaps = 8/321 (2%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+      +A +LS  I+             + + ++   + V +  Q D         +
Sbjct: 1   MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN 60

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                 +    ++         + K     +L    +  D + +   V L+    + ++ 
Sbjct: 61  STVPDDIGKNGKI-TKRTETVYDEKTNILQNLQF-DFIDDPTYD-KNVLLVKKQGSIHSN 117

Query: 121 FAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
                +     +N     S    +    +        +L     +    + T S      
Sbjct: 118 LKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGK 177

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNTFGVQEGFIAVL--GDKSLVEQKYS 235
           F     +   S +    +       +    +   N + V    IA        +  +   
Sbjct: 178 FDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLKYGGEVKNRNDE 237

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
            +   +       N  L  + KY     + S        +      + + Q + +     
Sbjct: 238 LLFYRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQ 297

Query: 296 ILPGKSITTTNFLFAGAKEFP 316
            +               K   
Sbjct: 298 DILKNRPGIHYAPSILEKNKD 318


>gi|119569915|gb|EAW49530.1| zinc finger, DHHC-type containing 6, isoform CRA_d [Homo sapiens]
          Length = 317

 Score = 37.3 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 13/182 (7%)

Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397
                +    ML+++   ++ N+  A+ +   FV L + P   +  +     K  Q    
Sbjct: 50  HTTGGSVNFIMLINWTVMILYNYFNAMFVGPGFVPLGWKPEISQDTMYLQYCKVCQAYKA 109

Query: 398 ELREKFKQSPPQVLQKA-----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452
                 ++    V++       +       N         +     +  A   V+++  +
Sbjct: 110 PRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFVMTMYTQ 169

Query: 453 MRHAPFWGWIK---DLAAA--DPTNIFTLFGILPFYLPGFMHVGIW--PIIMSLSMFIQM 505
           + H   +GW     D++AA  DP  I   FG+  F    F         I + +  FIQM
Sbjct: 170 LYHRLSFGWNTVKIDMSAARRDPLPIVP-FGLAAFATTLFALGLALGTTIAVGMLFFIQM 228

Query: 506 KM 507
           K+
Sbjct: 229 KI 230


>gi|229135200|ref|ZP_04263999.1| hypothetical protein bcere0014_41020 [Bacillus cereus BDRD-ST196]
 gi|228648242|gb|EEL04278.1| hypothetical protein bcere0014_41020 [Bacillus cereus BDRD-ST196]
          Length = 216

 Score = 37.3 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%)

Query: 6  NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
          N  +AI L  + + A+Q F    + +  +N++K  Q   + N+ + +          Q
Sbjct: 21 NIAIAIVLVAVAIVAYQLFVPDTKEQASSNDKKVAQQTTKENKAEKAKGKEETKKNEQ 78


>gi|298695281|gb|ADI98503.1| probable leukocidin S subunit [Staphylococcus aureus subsp. aureus
           ED133]
 gi|323439888|gb|EGA97604.1| leukocidin S subunit [Staphylococcus aureus O11]
 gi|323443051|gb|EGB00672.1| leukocidin S subunit [Staphylococcus aureus O46]
          Length = 351

 Score = 37.3 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 32/331 (9%), Positives = 84/331 (25%), Gaps = 24/331 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+      +A +LS  I+             + + ++   + V +  Q D         +
Sbjct: 1   MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN 60

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                 +    ++         + K     +L    +  D + +   V L+    + ++ 
Sbjct: 61  STVPDDIGKNGKI-TKRTETVYDEKTNILQNLQF-DFIDDPTYD-KNVLLVKKQGSIHSN 117

Query: 121 FAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
                +     +N     S    +    +        +L     +    + T S      
Sbjct: 118 LKFESHKEEKNSNWLKYPSEYHVDFQVKRNPKTEILDQLPKNKISTAKVDSTFSYSSGGK 177

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           F     +   S +    +       +    +   N + V    IA      L        
Sbjct: 178 FDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIA----NDLKYGGEVKN 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
               +  +  +               + + E SF S+++Y +   + +  +F        
Sbjct: 234 RNDELLFYRNTRI-----------ATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEK 282

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328
             +            +    + +       P
Sbjct: 283 SNEKTQFEVTY---TRNQDILKNRPGIHYAP 310


>gi|283782546|ref|YP_003373300.1| sortase family protein [Gardnerella vaginalis 409-05]
 gi|298253015|ref|ZP_06976807.1| sortase (surface protein transpeptidase) [Gardnerella vaginalis
          5-1]
 gi|283441702|gb|ADB14168.1| sortase family protein [Gardnerella vaginalis 409-05]
 gi|297532410|gb|EFH71296.1| sortase (surface protein transpeptidase) [Gardnerella vaginalis
          5-1]
          Length = 368

 Score = 37.3 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%)

Query: 7  YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66
            +A A+   +  AWQ ++   + E    E +   + + P   D +  A+  +    ALS
Sbjct: 29 LLIAFAVICALYIAWQMWWTGEQAEHTQVEARQAISWQNPKTGDKTKIALPQNTDPPALS 88

Query: 67 MSP 69
             
Sbjct: 89 KPK 91


>gi|39104512|dbj|BAC65789.3| mKIAA1423 protein [Mus musculus]
          Length = 438

 Score = 37.3 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 65/233 (27%), Gaps = 10/233 (4%)

Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFI---PSKETSFHSQFKYLSDGHARYQAKF 289
            YS      +     SN     + + W +  +   PS+ETS  + F          Q   
Sbjct: 87  NYSLNSSKKLKTVIPSNPLSTYNQQLWLTCVVELEPSEETSIQTSFTMTVKVDGVSQDGT 146

Query: 290 SANEITILPGKSITTTNF---LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346
           +      +  ++ T T               +++ +  + +    +        F  K  
Sbjct: 147 TTYIHNKVHNRTRTLTCAGKCAEIIVAHLGYLNYTQYRVTVEFEHLNQPIKDMNFTWKTY 206

Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406
               S          + +    +   L    L K         +     +  L   +  +
Sbjct: 207 NPAFSRLEIWFRFVFVVLTFIVIC--LFVHSLRKFSMRDWGIEQKWMSVLLALLLLYNDN 264

Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459
                         T N   +   + ++  + + + ++ ++    E+RH P+ 
Sbjct: 265 EL--NDPMYQYRVDTGNFQGMKVFFMVVAAVYILYLLFLIVRACSELRHMPYV 315


>gi|310780648|ref|YP_003968979.1| conjugation TrbI family protein [Ilyobacter polytropus DSM 2926]
 gi|309749971|gb|ADO84631.1| conjugation TrbI family protein [Ilyobacter polytropus DSM 2926]
          Length = 364

 Score = 37.3 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 28/274 (10%), Positives = 78/274 (28%), Gaps = 19/274 (6%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
              +  +A  L + I+    +F      +   +  K      +     N+ + +    + 
Sbjct: 21  NKRSLIIAFVLILGIIILTSSF------KNKGSSEKKESINLEEKMTVNNVSDLPNSYQE 74

Query: 63  QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG----YHL-DVSSNSPIVTLLSPSNTK 117
             +         N     +I+ K    D+   +     Y   +++  S I   ++  N +
Sbjct: 75  MRIKEEIETTFDNSKYTKNISYKNQMLDEEKHKKLDKLYQEAELAKRSGIGFGVNKRNNE 134

Query: 118 NAYFAELDYVSTANNIELPNSNTVW--------NLISGKILTPTTPIKLVFKNANNILFE 169
           N    +  Y+S   N+    S   +        N +   I  P +P ++        +  
Sbjct: 135 NTSIDQTTYISREQNLNDQGSKDSFLKNKESSPNYLGNYIEDPISPYEVKAGTIIPGIMI 194

Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229
             I+ D           +        +    +  +      ++    Q+  + V      
Sbjct: 195 TGINSDLPGSIVGQVRESVFDTVSGNYLLIPQGTKIFGTYDSSITWGQDRVLIVWQRLIF 254

Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVF 263
              K  ++      +      +    + ++ ++ 
Sbjct: 255 PNGKSINLSNMPGVDLTGQAGFSDKVNNHFGTLL 288


>gi|332827261|gb|EGK00031.1| hypothetical protein HMPREF9455_03620 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 442

 Score = 37.3 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 31/275 (11%), Positives = 81/275 (29%), Gaps = 5/275 (1%)

Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327
           +    +  +   D +    A    +E    P +     N +   A     I  +  +  +
Sbjct: 88  KEKGTALLQINGDLNQNPNAVTFFSEKQQPPRELTAYINDVLTEAVRNKKIDDFTSESNL 147

Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387
               +           K     + +         +  + T   + L F          + 
Sbjct: 148 EPQVVTNLQEILKSKDKIHISTIRWDETGKETETLGEIATVAGMALTFCMFFFIMMYGSM 207

Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447
            M+++  +      +   S  +     M ++     +  L     +++   V  AI  + 
Sbjct: 208 VMQSVVEEKSNRIIEVIISSVKPFDLMMGKIIGVGLVGLLQLVVWLVIGGGVMIAIQMIF 267

Query: 448 SISLEMRHAPFWGWIKDL---AAADPTNIFTLFGILPFYLPGFMHVGIWP--IIMSLSMF 502
            I+++M  +        L   +  +  +    F  + +       V  +    ++  S+F
Sbjct: 268 GINMDMSASVDTQQAMALMKSSNVEMASFLNGFFSINWVQVAICLVLYFTGGYLLFASLF 327

Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537
                    + + Q +I+  M ++ V   + F A 
Sbjct: 328 AMFGSGANDSQEAQQLIMPVMIILMVAFYTGFAAA 362


>gi|242243858|ref|ZP_04798302.1| aldose 1-epimerase [Staphylococcus epidermidis W23144]
 gi|242232702|gb|EES35014.1| aldose 1-epimerase [Staphylococcus epidermidis W23144]
          Length = 336

 Score = 37.3 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 29/292 (9%), Positives = 67/292 (22%), Gaps = 20/292 (6%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128
             +++ N          GA+        YH         + L +       YF E     
Sbjct: 13  DLIKIDNDDTKIVFTNYGARIVSW---KYH------DNNIVLGNVVEADEFYFEEPFNFG 63

Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS----LDEHYLFKIVD 184
                           +        +       +  +    R I     +D+    KI+ 
Sbjct: 64  ATVGRYAGRIENASFKLDDDTFQLESNDGQHHLHGGSHGLNRRIFDYEIVDDIGQVKIIF 123

Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244
           T T    +          + H            E         +     Y ++ + +   
Sbjct: 124 TTTIKEEEDNYPGNMMVKVIHTYDANHRWSVQYEAKSTKKTVFNPSNHVYFNLNRDNNVV 183

Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304
           ++   +       Y         +     + + L         K    +I     +++  
Sbjct: 184 YNHCIN-SSELKMYML------NDKHIVKEEQSLDLHRLLDTNKVYLKDIFESDNETLQQ 236

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
               + G          E  +    FE++I     +F+         +  + 
Sbjct: 237 QINHYNGIDHPFEFGGNELTIDNSEFELIIKTDMPHFVMFTFNDPQVWNNDF 288


>gi|85000749|ref|XP_955093.1| hypothetical protein [Theileria annulata strain Ankara]
 gi|65303239|emb|CAI75617.1| hypothetical protein, conserved [Theileria annulata]
          Length = 446

 Score = 37.3 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 82/254 (32%), Gaps = 23/254 (9%)

Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313
           ++D++  S F P          K  +      +      E   + G+S+           
Sbjct: 116 VNDRFVNSNFSPDDLNEKVYNVKNKTGNELIEE----LEEDLKISGESLGFEELFEIPDY 171

Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373
               +          R         F  +     M ++    L  ++   I L T+F KL
Sbjct: 172 HQYLMTRIMDLNGNKR----SILQRFLPVEYVQQMFLTVHDCLNLSWSATIFLITLFFKL 227

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-------AMIQLYKTHNI-- 424
           L  P+      S      I P++ +L+EK K +      +        + +L K ++   
Sbjct: 228 LLLPVWSAAERSRRLNAVIVPEVVKLQEKAKLAFSTKNHELARETQLKIFELTKRNSFVK 287

Query: 425 NPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFW-----GWIKDLAAADPTNIFTLFG 478
             L      ++Q  +F  +Y  + + +++    P +      W+  L+  DP  I     
Sbjct: 288 GILVQIGATMVQGLMFGTVYGGLRLFAIDPNSRPDFTYEPCLWLDSLSLPDPYYILPTIF 347

Query: 479 ILPFYLPGFMHVGI 492
            +        ++ +
Sbjct: 348 GILMTFVFEHNISL 361


>gi|15927581|ref|NP_375114.1| hypothetical protein SA1813 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148268479|ref|YP_001247422.1| Combined leucocidin/ASH4 hemolysin [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394542|ref|YP_001317217.1| Combined leucocidin/ASH4 hemolysin [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156980322|ref|YP_001442581.1| hypothetical protein SAHV_1991 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|257793275|ref|ZP_05642254.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|258413682|ref|ZP_05681956.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|258419788|ref|ZP_05682751.1| aerolysin/Leukocidin family protein [Staphylococcus aureus A9719]
 gi|258434309|ref|ZP_05688710.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A9299]
 gi|258444469|ref|ZP_05692802.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A8115]
 gi|258445361|ref|ZP_05693552.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A6300]
 gi|258447829|ref|ZP_05695964.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A6224]
 gi|258454463|ref|ZP_05702430.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A5937]
 gi|269203660|ref|YP_003282929.1| Aerolysin/leukocidin family protein [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282894610|ref|ZP_06302838.1| conserved hypothetical protein [Staphylococcus aureus A8117]
 gi|282928807|ref|ZP_06336400.1| conserved hypothetical leukocidin-like protein 2 [Staphylococcus
           aureus A10102]
 gi|295407333|ref|ZP_06817131.1| leukocidin-like protein 2 [Staphylococcus aureus A8819]
 gi|296277055|ref|ZP_06859562.1| Aerolysin/leukocidin family protein [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297246412|ref|ZP_06930254.1| leukocidin-like protein 2 [Staphylococcus aureus A8796]
 gi|81781225|sp|Q99SN7|LUKL2_STAAN RecName: Full=Uncharacterized leukocidin-like protein 2; Flags:
           Precursor
 gi|13701800|dbj|BAB43093.1| SA1813 [Staphylococcus aureus subsp. aureus N315]
 gi|147741548|gb|ABQ49846.1| Combined Leucocidin/ASH4 hemolysin [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946994|gb|ABR52930.1| Combined Leucocidin/ASH4 hemolysin [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156722457|dbj|BAF78874.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|257787247|gb|EEV25587.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|257839635|gb|EEV64105.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257844199|gb|EEV68585.1| aerolysin/Leukocidin family protein [Staphylococcus aureus A9719]
 gi|257849257|gb|EEV73238.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A9299]
 gi|257850360|gb|EEV74309.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A8115]
 gi|257855879|gb|EEV78803.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A6300]
 gi|257858926|gb|EEV81794.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A6224]
 gi|257863320|gb|EEV86081.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A5937]
 gi|262075950|gb|ACY11923.1| Aerolysin/leukocidin family protein [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282589542|gb|EFB94630.1| conserved hypothetical leukocidin-like protein 2 [Staphylococcus
           aureus A10102]
 gi|282763097|gb|EFC03229.1| conserved hypothetical protein [Staphylococcus aureus A8117]
 gi|285817691|gb|ADC38178.1| hypothetical protein SA2981_1967 [Staphylococcus aureus 04-02981]
 gi|294967778|gb|EFG43809.1| leukocidin-like protein 2 [Staphylococcus aureus A8819]
 gi|297176683|gb|EFH35944.1| leukocidin-like protein 2 [Staphylococcus aureus A8796]
 gi|312830378|emb|CBX35220.1| leukocidin/Hemolysin toxin family protein [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315128687|gb|EFT84689.1| succinyl-diaminopimelate desuccinylase [Staphylococcus aureus
           subsp. aureus CGS03]
 gi|329724185|gb|EGG60700.1| beta-channel forming cytolysin [Staphylococcus aureus subsp. aureus
           21172]
          Length = 351

 Score = 37.3 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 32/331 (9%), Positives = 84/331 (25%), Gaps = 24/331 (7%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60
           M+      +A +LS  I+             + + ++   + V +  Q D         +
Sbjct: 1   MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN 60

Query: 61  RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120
                 +    ++         + K     +L    +  D + +   V L+    + ++ 
Sbjct: 61  STVPDDIGKNGKI-TKRTETVYDEKTNILQNLQF-DFIDDPTYD-KNVLLVKKQGSIHSN 117

Query: 121 FAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179
                +     +N     S    +    +        +L     +    + T S      
Sbjct: 118 LKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGK 177

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNTFGVQEGFIAVLGDKSLVEQKYSDI 237
           F     +   S +    +       +    +   N + V    IA      L        
Sbjct: 178 FDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIA----NDLKYGGEVKN 233

Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297
               +  +  +               + + E SF S+++Y +   + +  +F        
Sbjct: 234 RNDELLFYRNTRI-----------ATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEK 282

Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328
             +            +    + +       P
Sbjct: 283 SNEKTQFEVTY---TRNQDILKNRPGIHYAP 310


>gi|302906936|ref|XP_003049536.1| hypothetical protein NECHADRAFT_30409 [Nectria haematococca mpVI
           77-13-4]
 gi|256730472|gb|EEU43823.1| hypothetical protein NECHADRAFT_30409 [Nectria haematococca mpVI
           77-13-4]
          Length = 1225

 Score = 37.3 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 4/111 (3%)

Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483
           +N       +L    VF A    + ++  +  A     + DL   D  +I+  +  L + 
Sbjct: 386 VNTATTFLTVLSGYGVFLAPMTGLMVAHYIVVAKMKVNVDDLYTGDSNSIYWYYKGLNWR 445

Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534
            P    VG+ P++      + + +S        A+ L ++  ++ F  S+F
Sbjct: 446 APIAWVVGVAPLLPGFIAAVNLSISISDG----AIELYYLNYMYGFMASAF 492


>gi|297243236|ref|ZP_06927171.1| sortase (surface protein transpeptidase) [Gardnerella vaginalis
          AMD]
 gi|296888770|gb|EFH27507.1| sortase (surface protein transpeptidase) [Gardnerella vaginalis
          AMD]
          Length = 368

 Score = 37.3 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%)

Query: 7  YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66
            +A A+   +  AWQ ++   + E    E +   + + P   D +  A+  +    ALS
Sbjct: 29 LLIAFAVICALYIAWQMWWTGEQAEHTQVEARQAISWQNPKTGDKTKIALPQNTDPPALS 88

Query: 67 MSP 69
             
Sbjct: 89 KPK 91


>gi|253570173|ref|ZP_04847582.1| beta-galactosidase [Bacteroides sp. 1_1_6]
 gi|251840554|gb|EES68636.1| beta-galactosidase [Bacteroides sp. 1_1_6]
          Length = 1343

 Score = 37.3 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 20/191 (10%), Positives = 55/191 (28%), Gaps = 4/191 (2%)

Query: 32  EMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDD 91
            M  E+  I+       +    A     D       + R+ +K        + +      
Sbjct: 780 PMAEEQILIKEATDRPSISEVTAGAAKQDGFVLDKDTKRILIKGADFEAIFDPQTGSIYS 839

Query: 92  LNLRGYHLDVSSNSPIVT-LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL 150
           L      +    N P +  L + +N  N ++A            L +  T + +++    
Sbjct: 840 LKYGNETVIADGNGPKLDALRAFTNNDNWFYAP---WFEHGLHNLIHKATEYKVLNKGNG 896

Query: 151 TPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210
           T      +  +  N    +   S  ++ + ++ D    ++  +   +    +        
Sbjct: 897 TLVLSFTVESQAPNAARIKGGTSSGKNSIEELTDRKFGSNDFKFVTNQIWTVYPDGSIEL 956

Query: 211 TNTFGVQEGFI 221
            ++       +
Sbjct: 957 QSSITSNRSSL 967


>gi|293556772|ref|ZP_06675335.1| lacx protein [Enterococcus faecium E1039]
 gi|291601104|gb|EFF31393.1| lacx protein [Enterococcus faecium E1039]
          Length = 291

 Score = 37.3 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 25/223 (11%), Positives = 59/223 (26%), Gaps = 10/223 (4%)

Query: 70  RVELKNPSLIGSINLKGAQFDDLNLRGY---------HLDVSSNSPIVTLLSPSNTKNAY 120
            V ++N  LI  I   GA+   L  + +               ++P++         + Y
Sbjct: 2   TVIIQNDQLIAEIAEHGAELISLKSKEHGLEYIWQGDPAYWGRHAPVLFPFVGRLKDDQY 61

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179
             +        +    + +        ++ +                FE  IS +     
Sbjct: 62  VYQGKTYQMGQHGFARDMDFEVIEHGQEMASFILRSTPETLEKYPFDFELVISYELGGDG 121

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
             +   V N    ++ FS  G    + P     +F       + L  +  +  K   I+ 
Sbjct: 122 ITVHYQVANTGEKEMFFSIGGHPTFNVPLEEGLSFEDFYLAFSPLKSRLRLPLKGPFIDM 181

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
              +    + +     + +     +           +     H
Sbjct: 182 DQKTLGQTNTNLALNRELFEQDALVFETRGLNAYAIRSEKSSH 224


>gi|229543751|ref|ZP_04432811.1| protein of unknown function DUF1510 [Bacillus coagulans 36D1]
 gi|229328171|gb|EEN93846.1| protein of unknown function DUF1510 [Bacillus coagulans 36D1]
          Length = 204

 Score = 37.3 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 29/82 (35%), Gaps = 8/82 (9%)

Query: 1  MERNW--------NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS 52
          M+++         N  + I +++I + A+  F+      +   + K     K  +    +
Sbjct: 14 MQQSKRRKTNIILNTLIVIVIALICIVAYSIFFAGNDNSKPAPKEKKAAVTKTASSGHET 73

Query: 53 YAAVLIDDRAQALSMSPRVELK 74
           ++      A   S     +++
Sbjct: 74 TSSHTSKKTADKDSKKSTRKVE 95


>gi|188587830|ref|YP_001919724.1| TPR-repeat-containing protein [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188498111|gb|ACD51247.1| TPR-repeat-containing protein [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 423

 Score = 37.3 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 22/233 (9%), Positives = 70/233 (30%), Gaps = 19/233 (8%)

Query: 8   FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67
            +A+ L V I   +  F    ++    N+  + ++  +  +  NS   V+ +++ ++ S 
Sbjct: 181 IIALVLVVFICGTFYVFKEKFKVNLKENDNMSTESSNKAEENSNSSENVVNEEQKESESK 240

Query: 68  SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL--LSPSNTKNAY---FA 122
            P   +   +    +++         L  +  +   ++    L  ++  +  + Y   + 
Sbjct: 241 IPDTTIDEQNKKAQLDIN-------KLSEHFENGDVDNIYYDLQNVNEQDISDEYKGLYR 293

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182
               +   + IE+     +                  +  +     +  I   +     +
Sbjct: 294 RCVNLLKTSGIEVFYGKGMEEFNIQNYEKANIEFSKAYDYSEGSYLKEHIIFYKA----V 349

Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235
                NN  + I+      +   +    +    V      +  +    +  Y 
Sbjct: 350 TLEQLNNFDEAIKLY---ELYYSEYPKGSYADNVLYNLSLMFNNTDREKSIYY 399


>gi|187931932|ref|YP_001891917.1| preprotein translocase subunit SecD [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187712841|gb|ACD31138.1| preprotein translocase, subunit D, membrane protein [Francisella
           tularensis subsp. mediasiatica FSC147]
          Length = 645

 Score = 37.3 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 42/435 (9%), Positives = 113/435 (25%), Gaps = 29/435 (6%)

Query: 5   WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64
            N  + I L++ I YA  N +      +++ +  ++ T    +  +      +   +A  
Sbjct: 16  KNLLIVIILALAIFYALPNVFGKSPALQISQKDGDVTTQLLVSVENTLAKDKISYQKADI 75

Query: 65  LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE 123
                 + +                 +  L+   +   S +   +  ++  +    + + 
Sbjct: 76  ADDKSNIAITFKD------------VEEQLKAKKVLKDSLSDDYIIAMNMLSNSPNWLSA 123

Query: 124 LDYVSTANNIELPNSNTVW-----NLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
           L        ++L     +             L  +  I L     N+I    +   +E  
Sbjct: 124 LGANPMNLGLDLRGGMYLMLEADTKTSIDAQLDNSLSIILSAAKDNSINISSSTKAEEKS 183

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
             K      +N    I  +    + + K   +T+    Q+  I      + V   Y+  +
Sbjct: 184 TIKAPQNYFDNGFVSITLANSVDVDKLKQYLSTDFIKTQDPNIIYTNKGNTVFISYNSAK 243

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
              +     S     + ++      I +   +  S  +   +                  
Sbjct: 244 ILQLKQDAISQVVTVMRNR------INALGVAEASVAQAGDNRVVIEIPGLQDATQAKQI 297

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYN 355
               +T +F          +   E+   +   +    +  +Y     A      +     
Sbjct: 298 LGGTSTASFYLVNP-VADRLAAEEQGYKVYSLDNGRGYQSYYSLKGTAVAGGADIIGASP 356

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKA 414
            +       ++     +       +    +  N   +        + K K    + +   
Sbjct: 357 SIDRQTGTPIVMVELDRSAASHFRQITGKNIGNPMGVMLVNTTYEKVKDKDGKEKNVVSK 416

Query: 415 MIQLYKTHNINPLAG 429
             +L     I    G
Sbjct: 417 TEKLINVATIQSALG 431


>gi|305666862|ref|YP_003863149.1| beta-galactosidase [Maribacter sp. HTCC2170]
 gi|88709086|gb|EAR01320.1| beta-galactosidase [Maribacter sp. HTCC2170]
          Length = 1116

 Score = 37.3 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 39/324 (12%), Positives = 82/324 (25%), Gaps = 12/324 (3%)

Query: 52   SYAAVLIDDRAQALSMSP-RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110
              A   ++++A +L+ S  ++ + N  L    N K  +      +G    +         
Sbjct: 771  KEANPKLEEKALSLTESNGKIIIDNDQLKLVFNKKEGRLTSYVFQG-EELLKDGKGPKPN 829

Query: 111  LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170
               + T N +  ++   +         S                             F  
Sbjct: 830  FWRAPTDNDFGNQMHIKNLEWKKASLFSKVSKVTHIIMKDGSVQFEVTYQLPGVETSFTS 889

Query: 171  TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--------FIA 222
              ++  + +  + +T+ +            R+   K   A N FG               
Sbjct: 890  VYTVYGNGVVAMENTLNSTEYMADVPRIGMRMQLPKQYDAMNYFGRGPWENYQDRRASAF 949

Query: 223  VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE--TSFHSQFKYLSD 280
            V    S V+ +Y    +   + +  +  W   S++    + I +K           ++ +
Sbjct: 950  VDLYTSEVKDQYVPYIRPQENGYKTNVRWAAFSNQKNKGLLIVAKNPQKGLGISALHMPN 1009

Query: 281  GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340
                  A         +             G+K    I   +        E     G   
Sbjct: 1010 EDFDTTAGLDYGGNKKVNKTYQIDGIPEVNGSKHTTDIKEQDLVQLNIDMEQRGVAGDDS 1069

Query: 341  FIAKPMFMLMSYFYNLVGNFGIAI 364
            + AKP    M             I
Sbjct: 1070 WYAKPQEKYMIKGQQNHSYGFFMI 1093


>gi|257884849|ref|ZP_05664502.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|257820687|gb|EEV47835.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
          Length = 293

 Score = 37.3 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 25/223 (11%), Positives = 59/223 (26%), Gaps = 10/223 (4%)

Query: 70  RVELKNPSLIGSINLKGAQFDDLNLRGY---------HLDVSSNSPIVTLLSPSNTKNAY 120
            V ++N  LI  I   GA+   L  + +               ++P++         + Y
Sbjct: 4   TVIIQNDQLIAEIAEHGAELISLKSKEHGLEYIWQGDPAYWGRHAPVLFPFVGRLKDDQY 63

Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179
             +        +    + +        ++ +                FE  IS +     
Sbjct: 64  VYQGKTYQMGQHGFARDMDFEVIEHGQEMASFILRSTPETLEKYPFDFELVISYELGGDG 123

Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239
             +   V N    ++ FS  G    + P     +F       + L  +  +  K   I+ 
Sbjct: 124 ITVHYQVANTGEKEMYFSIGGHPAFNVPLEEGLSFEDFYLAFSPLKSRLRLPLKGPFIDM 183

Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282
              +    + +     + +     +           +     H
Sbjct: 184 DQKTLGQTNTNLALNRELFEQDALVFETRGLNAYAIRSEKSSH 226


>gi|297528718|ref|YP_003669993.1| efflux transporter RND family, MFP subunit [Geobacillus sp. C56-T3]
 gi|297251970|gb|ADI25416.1| efflux transporter, RND family, MFP subunit [Geobacillus sp.
           C56-T3]
          Length = 382

 Score = 37.3 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 14/114 (12%), Positives = 36/114 (31%), Gaps = 19/114 (16%)

Query: 1   MERNWNYFVAIALSVIIVYA-----WQNFYVYPRIEEMNNERKNIQTVKQPNQVDN---- 51
           ME      + +++  II        +  F   P ++    +++++      N        
Sbjct: 1   MENKKRILIGVSVIAIIFLLVGVNVYIAFAGKPTVKTTTLQQRDLSKTITTNGTVELKNV 60

Query: 52  ----------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95
                     + + VL+++  +     P ++  N  LI  I           ++
Sbjct: 61  YKVYKDPQLGNISEVLVNENQEVKKGDPLLKYSNQQLILEIQQNNIDIKSAYIK 114


>gi|262038694|ref|ZP_06012054.1| peptidase M23B [Leptotrichia goodfellowii F0264]
 gi|261747246|gb|EEY34725.1| peptidase M23B [Leptotrichia goodfellowii F0264]
          Length = 294

 Score = 37.3 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 19/169 (11%), Positives = 49/169 (28%), Gaps = 16/169 (9%)

Query: 3   RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62
            N N  V I L  + +  +   +     E +    K     K  +          + +  
Sbjct: 28  ENKNTIVFIGLIAVFLMVF--IFQTSHTENIYATSKKQNVYKTESNNTRENVKNSLHEET 85

Query: 63  QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122
           + L  +  ++ +       I+  G + +            +   I+++ + S T+ AY  
Sbjct: 86  EKLKDNK-IQEETGQKDLKIS-IGEKIER----------ETKRNIISIRNGSATRKAYAK 133

Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171
             +  S     +       +      I +     K  +   +  +  + 
Sbjct: 134 NENRNSAIYYTKYNTRVDNYERED--IRSQEISEKFYWPVGSQNITSKY 180


>gi|156083851|ref|XP_001609409.1| cytochrome oxidase biogenesis protein 1-1 (OXA1) [Babesia bovis
           T2Bo]
 gi|154796660|gb|EDO05841.1| cytochrome oxidase biogenesis protein 1-1 (OXA1), putative [Babesia
           bovis]
          Length = 408

 Score = 37.3 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 73/236 (30%), Gaps = 22/236 (9%)

Query: 258 YWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT----NFLFAGAK 313
           +W S           S     +       +   +  +      ++  T    +       
Sbjct: 60  FWTSNRSKQSSLDAQSSTTVDTSQRNGASSDNESAPLPCSTASTVELTPLGESDGHISDP 119

Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373
               +    +     R  ++       F+   +  +     +   ++   I L T+ +K+
Sbjct: 120 VQEALFELVESHNGNRKGIIQRMLPVEFMRDVLTNI---HESTGLSWATTITLLTLTMKV 176

Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA----- 428
            F PL      +  N  ++ P   EL+E+  ++  +   K  +++ +      L      
Sbjct: 177 AFIPLWAMGERARRNNAHLVPIATELQERLAEARKEGNVKKSMEIQRIMYKQMLRKSFLK 236

Query: 429 ----GCWPILLQIPVFFAIYKVI-SISLEMRHAPFW-----GWIKDLAAADPTNIF 474
                      Q   F  +Y  +   ++E R  P +      W+K LA  DP  IF
Sbjct: 237 SAGLQILAAGTQGLTFAWVYGGLKMFAIEPRICPDFVMESPLWLKSLALPDPYYIF 292


>gi|321312731|ref|YP_004205018.1| bacteriophage SPP1 receptor [Bacillus subtilis BSn5]
 gi|320019005|gb|ADV93991.1| bacteriophage SPP1 receptor [Bacillus subtilis BSn5]
          Length = 1074

 Score = 37.3 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 21/180 (11%), Positives = 51/180 (28%), Gaps = 5/180 (2%)

Query: 1   MERNWNYFV----AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56
           M       +    A+ + +++   +  F      ++  N  + I  V +   V +     
Sbjct: 1   MTEQRKSLIKLISAVIIILLLPVLFFRFIGDDPTKKAVNSTRQIAVVNEDTGVLSDEVKS 60

Query: 57  LIDDRAQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115
             +D++          L + P    ++  + A    L  + Y   V   S     +   +
Sbjct: 61  DEEDKSAQFGKEVAAVLGERPDYSWTVVNRSAAETGLASKKYDAIVYIPSDFSKNILSYD 120

Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175
             +   A L++    N   +        L   +         L +   +  +       D
Sbjct: 121 KDHPQKATLEFSIQDNLNAVNKEKVQRELEDAQKTMNKKMSALYWNFVSQKVDNIRGEFD 180


>gi|297564406|ref|YP_003683379.1| membrane protein insertase, YidC/Oxa1 family [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
 gi|296848855|gb|ADH70873.1| membrane protein insertase, YidC/Oxa1 family [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
          Length = 236

 Score = 37.3 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443
            +      + P++ ++  + + +P   L     ++Y     +PLAGC P L Q+PV  A+
Sbjct: 58  RAEKARARLAPQLAKITARHRGNPE-RLVAEQRRVYAEAGTSPLAGCLPSLAQVPVMIAL 116

Query: 444 YKVISIS 450
           Y V   +
Sbjct: 117 YGVFIGA 123


>gi|56708193|ref|YP_170089.1| preprotein translocase subunit SecD [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670664|ref|YP_667221.1| preprotein translocase subunit SecD [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224457296|ref|ZP_03665769.1| preprotein translocase subunit SecD [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370680|ref|ZP_04986685.1| preprotein translocase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875005|ref|ZP_05247715.1| preprotein translocase subunit secD [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604685|emb|CAG45748.1| preprotein translocase, subunit D, membrane protein [Francisella
           tularensis subsp. tularensis SCHU S4]
 gi|110320997|emb|CAL09131.1| preprotein translocase, subunit D, membrane protein [Francisella
           tularensis subsp. tularensis FSC198]
 gi|151568923|gb|EDN34577.1| preprotein translocase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254841004|gb|EET19440.1| preprotein translocase subunit secD [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159409|gb|ADA78800.1| preprotein translocase subunit SecD [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 645

 Score = 36.9 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 42/435 (9%), Positives = 113/435 (25%), Gaps = 29/435 (6%)

Query: 5   WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64
            N  + I L++ I YA  N +      +++ +  ++ T    +  +      +   +A  
Sbjct: 16  KNLLIVIILALAIFYALPNVFGKSPALQISQKDGDVTTQLLVSVENTLAKDKISYQKADI 75

Query: 65  LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE 123
                 + +                 +  L+   +   S +   +  ++  +    + + 
Sbjct: 76  ADDKSNIAITFKD------------VEEQLKAKKVLKDSLSDDYIIAMNMLSNSPNWLSA 123

Query: 124 LDYVSTANNIELPNSNTVW-----NLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
           L        ++L     +             L  +  I L     N+I    +   +E  
Sbjct: 124 LGANPMNLGLDLRGGMYLMLEADTKTSIDAQLDNSLSIILSAAKDNSINISSSTKAEEKS 183

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
             K      +N    I  +    + + K   +T+    Q+  I      + V   Y+  +
Sbjct: 184 TIKAPQNYFDNGFVSITLANSVDVDKLKQYLSTDFIKTQDPNIIYTNKGNTVFISYNSAK 243

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
              +     S     + ++      I +   +  S  +   +                  
Sbjct: 244 ILQLKQDAISQVVTVMRNR------INALGVAEASVAQAGDNRVVIEIPGLQDATQAKQI 297

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYN 355
               +T +F          +   E+   +   +    +  +Y     A      +     
Sbjct: 298 LGGTSTASFYLVNP-VADRLAAEEQGYKVYSLDNGRGYQSYYSLKGTAIAGGADIIGASP 356

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKA 414
            +       ++     +       +    +  N   +        + K K    + +   
Sbjct: 357 SIDRQTGTPIVMVELDRSAASHFRQITGKNIGNPMGVMLVNTTYEKVKDKDGKEKNVVSK 416

Query: 415 MIQLYKTHNINPLAG 429
             +L     I    G
Sbjct: 417 TEKLINVATIQSALG 431


>gi|223042504|ref|ZP_03612553.1| putative aldose 1-epimerase [Staphylococcus capitis SK14]
 gi|222444167|gb|EEE50263.1| putative aldose 1-epimerase [Staphylococcus capitis SK14]
          Length = 336

 Score = 36.9 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 27/292 (9%), Positives = 69/292 (23%), Gaps = 20/292 (6%)

Query: 69  PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128
             +++ N       +  GA+        YH         + L +       YF       
Sbjct: 13  DLIKIDNDETKIVFSNYGARIVSW---KYH------DNNIILGNVVEADEFYFENPFNFG 63

Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS----LDEHYLFKIVD 184
                           + G              +  +   ++ I     +DE    KI+ 
Sbjct: 64  ATIGRYAGRIKDASFKLDGHTYELENNDSPHHIHGGSKGLDKRIFDYEIIDEIGQIKIIF 123

Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244
           T T   ++          + H            E         +     Y ++ + +   
Sbjct: 124 TTTIKEMEDHYPGDMTIKVTHTYDADHRWTIQYEAESTKRTLFNPTNHVYFNLNRDNNVV 183

Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304
            +   S   +             + +  +  + L+             +I     + +  
Sbjct: 184 DNHRMSSSSLK-------MYTLDDENIVTGDEPLNFSQIFEDEHILFKDIFDSTNQKLQE 236

Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356
               + G      +   +  +    FE+LI+      +        ++  + 
Sbjct: 237 QMQRYKGLDHPFEVGDQQLAIDNKEFELLIETDMPNMVIFTFNEPQNWDSDF 288


>gi|229032027|ref|ZP_04188010.1| hypothetical protein bcere0028_40720 [Bacillus cereus AH1271]
 gi|228729272|gb|EEL80266.1| hypothetical protein bcere0028_40720 [Bacillus cereus AH1271]
          Length = 215

 Score = 36.9 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 26/58 (44%)

Query: 6  NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
          N  +AI L ++ + ++Q F    + +  ++++K  Q   + N+ + +          Q
Sbjct: 21 NIAIAIVLILVAIVSYQLFVPERKEQASSSDKKVAQQTTKENKAEKAKGKEETKKNEQ 78


>gi|223041494|ref|ZP_03611697.1| potassium efflux protein KefA [Actinobacillus minor 202]
 gi|223017752|gb|EEF16159.1| potassium efflux protein KefA [Actinobacillus minor 202]
          Length = 1106

 Score = 36.9 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 62/215 (28%), Gaps = 7/215 (3%)

Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392
           +        I    +    Y    + N    I+         +  ++             
Sbjct: 691 VAPISLIVLILLGYYYTAVYLITHLLNSYFVILFWVFGRYFAYRFVSISARRLAYRRLQE 750

Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---SI 449
           + +    ++               +  K   +N        L+   V FA+  V+    +
Sbjct: 751 KRQKIREQQAADAQSNSKEDAKEEETIKLSVVNQQIFRVTDLIGWVVLFALLYVVWSDLL 810

Query: 450 SLEMRHAPFWGW-IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508
           S+         W   D    D   +  L   L + +  ++ V     I+ ++ F +M++S
Sbjct: 811 SVAYYLDGVILWESNDGTQVDSVTLLNLMRALLYVMVTYVLVKNIAGILEVTFFSRMRLS 870

Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543
                  Q +I     ++      S  + L I W+
Sbjct: 871 KGTP---QTIITVLTYIIITIGSVSAFSALGISWT 902


>gi|46398523|gb|AAS91947.1| IcmG protein [Legionella pneumophila]
 gi|46398529|gb|AAS91950.1| IcmG protein [Legionella pneumophila]
          Length = 269

 Score = 36.9 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 14/102 (13%)

Query: 2   ERNWNYFVAIALSVII-----VYAWQNFYVYP---------RIEEMNNERKNIQTVKQPN 47
           +   N  +AI   V I     +  W  F                      + +QT+    
Sbjct: 48  DIKRNALIAIGAVVFIMVMYKIIGWMFFSDKSSQVTSKPAIPPVTQVATPQPVQTIPTTT 107

Query: 48  QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89
            +       +I+D          +E+   SL   +N  G Q 
Sbjct: 108 PIQQVQPTTIIEDDPDLKKKVSAIEMTQQSLRSEVNALGEQI 149


>gi|62261535|gb|AAX77996.1| unknown protein [synthetic construct]
          Length = 680

 Score = 36.9 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 42/435 (9%), Positives = 113/435 (25%), Gaps = 29/435 (6%)

Query: 5   WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64
            N  + I L++ I YA  N +      +++ +  ++ T    +  +      +   +A  
Sbjct: 42  KNLLIVIILALAIFYALPNVFGKSPALQISQKDGDVTTQLLVSVENTLAKDKISYQKADI 101

Query: 65  LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE 123
                 + +                 +  L+   +   S +   +  ++  +    + + 
Sbjct: 102 ADDKSNIAITFKD------------VEEQLKAKKVLKDSLSDDYIIAMNMLSNSPNWLSA 149

Query: 124 LDYVSTANNIELPNSNTVW-----NLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
           L        ++L     +             L  +  I L     N+I    +   +E  
Sbjct: 150 LGANPMNLGLDLRGGMYLMLEADTKTSIDAQLDNSLSIILSAAKDNSINISSSTKAEEKS 209

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
             K      +N    I  +    + + K   +T+    Q+  I      + V   Y+  +
Sbjct: 210 TIKAPQNYFDNGFVSITLANSVDVDKLKQYLSTDFIKTQDPNIIYTNKGNTVFISYNSAK 269

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
              +     S     + ++      I +   +  S  +   +                  
Sbjct: 270 ILQLKQDAISQVVTVMRNR------INALGVAEASVAQAGDNRVVIEIPGLQDATQAKQI 323

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYN 355
               +T +F          +   E+   +   +    +  +Y     A      +     
Sbjct: 324 LGGTSTASFYLVNP-VADRLAAEEQGYKVYSLDNGRGYQSYYSLKGTAIAGGADIIGASP 382

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKA 414
            +       ++     +       +    +  N   +        + K K    + +   
Sbjct: 383 SIDRQTGTPIVMVELDRSAASHFRQITGKNIGNPMGVMLVNTTYEKVKDKDGKEKNVVSK 442

Query: 415 MIQLYKTHNINPLAG 429
             +L     I    G
Sbjct: 443 TEKLINVATIQSALG 457


>gi|54296487|ref|YP_122856.1| hypothetical protein lpp0518 [Legionella pneumophila str. Paris]
 gi|46398543|gb|AAS91957.1| IcmG protein [Legionella pneumophila]
 gi|46398553|gb|AAS91962.1| IcmG protein [Legionella pneumophila]
 gi|53750272|emb|CAH11666.1| hypothetical protein lpp0518 [Legionella pneumophila str. Paris]
          Length = 269

 Score = 36.9 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 14/102 (13%)

Query: 2   ERNWNYFVAIALSVII-----VYAWQNFYVYP---------RIEEMNNERKNIQTVKQPN 47
           +   N  +AI   V I     +  W  F                      + +QT+    
Sbjct: 48  DIKRNALIAIGAVVFIMVMYKIIGWMFFSDKSSQVTTKPAIPPVTQVATPQPVQTIPTTT 107

Query: 48  QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89
            +       +I+D          +E+   SL   +N  G Q 
Sbjct: 108 PIQQVQPTTIIEDDPDLKKKVSAIEMTQQSLRSEVNALGEQI 149


>gi|226952205|ref|ZP_03822669.1| sporulation domain-containing protein [Acinetobacter sp. ATCC
           27244]
 gi|294648856|ref|ZP_06726312.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|226837043|gb|EEH69426.1| sporulation domain-containing protein [Acinetobacter sp. ATCC
           27244]
 gi|292825247|gb|EFF83994.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 203

 Score = 36.9 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 7/79 (8%), Positives = 26/79 (32%), Gaps = 5/79 (6%)

Query: 8   FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-----PNQVDNSYAAVLIDDRA 62
            +AI   ++++  W+ +   P   ++ +E    +   +               +      
Sbjct: 31  ILAILCVIVMLMLWKPWQPVPAKSQITSEHYQEENTNKDYRFYDLLPQQQVTPIPEQAVP 90

Query: 63  QALSMSPRVELKNPSLIGS 81
           +       V +++P +  +
Sbjct: 91  ETKQQGNVVIIESPRVEAT 109


>gi|254375067|ref|ZP_04990547.1| hypothetical protein FTDG_01255 [Francisella novicida GA99-3548]
 gi|151572785|gb|EDN38439.1| hypothetical protein FTDG_01255 [Francisella novicida GA99-3548]
          Length = 286

 Score = 36.9 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 22/215 (10%), Positives = 61/215 (28%), Gaps = 8/215 (3%)

Query: 71  VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130
           + +KN +L+  I+  GA+            +++++    + S      A  + + +    
Sbjct: 2   ITIKNDNLLVEISELGAEV--------RAVINTSTEHGYMWSGDGRVWAGVSPVLFPVVG 53

Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190
            + +            G        +  +  ++ N +     +  E Y F++   VT   
Sbjct: 54  KSHDNKIKYQGKEYPMGNHGLARHTVFDIVLHSENSVILAMETTKEDYPFRLRFEVTYTL 113

Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250
                 +    I       +                    + + +  E+    +     +
Sbjct: 114 EVNKLITEYNIINLEDSVASCGFGAHPAFACPFDDKHKFSDYEITFSEQKLDFHPITPEA 173

Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285
           +     KY+    I   + +F +     S    + 
Sbjct: 174 FYIGETKYFKLSKIALDDHTFDNDALVYSGFTDKR 208


>gi|254373051|ref|ZP_04988540.1| preprotein translocase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570778|gb|EDN36432.1| preprotein translocase [Francisella novicida GA99-3549]
          Length = 645

 Score = 36.9 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 42/435 (9%), Positives = 113/435 (25%), Gaps = 29/435 (6%)

Query: 5   WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64
            N  + I L++ I YA  N +      +++ +  ++ T    +  +      +   +A  
Sbjct: 16  KNLLIVIVLALAIFYALPNVFGKSPALQISQKDGDVTTQLLVSVENTLAKDKISYQKADI 75

Query: 65  LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE 123
                 + +                 +  L+   +   S ++  +  ++  +    + + 
Sbjct: 76  ADDKSNIAITFKD------------VEEQLKAKKVLKDSLSNDYIIAMNMLSNSPNWLSA 123

Query: 124 LDYVSTANNIELPNSNTVW-----NLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
           L        ++L     +             L  +  I L     N+I    +   +E  
Sbjct: 124 LGANPMNLGLDLRGGMYLMLEADTKTSIDAQLDNSLSIILSAAKDNSINISSSTKAEEKS 183

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
             K       N    I  +    + + K   +T+    Q+  I      + V   Y+  +
Sbjct: 184 TIKAPQNYLENGFVSITLANSADVDKLKQYLSTDFIKTQDPNIIYTNKGNTVFISYNSAK 243

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
              +     S     + ++      I +   +  S  +   +                  
Sbjct: 244 ILQLKQDAISQVVTVMRNR------INALGVAEASVAQAGDNRVVIEIPGLQDATQAKQI 297

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYN 355
               +T +F          +   E+   +   +    +  +Y     A      +     
Sbjct: 298 LGGTSTASFYLVNP-VADRLAAEEQGYKVYSLDNGRGYQSYYSLKGTAVAGGADIIGASP 356

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKA 414
            +       ++     +       +    +  N   +        + K K    + +   
Sbjct: 357 SIDRQTGTPIVMVELDRSAASHFRQITGKNIGNPMGVMLVNTTYEKVKDKDGKEKNVVSK 416

Query: 415 MIQLYKTHNINPLAG 429
             +L     I    G
Sbjct: 417 TEKLINVATIQSALG 431


>gi|119713718|gb|ABL97768.1| RND efflux family transporter [uncultured marine bacterium
          EB0_41B09]
          Length = 1030

 Score = 36.9 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 5/92 (5%)

Query: 5  WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64
             F+ I +S++I      F +  + +     R+ I T   P         ++     + 
Sbjct: 11 KKIFLFIVVSLMIYGGVSYFTLPSQEDPTIVSREAIVTTNFPGMSPQRIELLITKKLEEQ 70

Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96
          +   P +++       SI+  G+    + +  
Sbjct: 71 IRKIPEIKMLT-----SISQTGSSIIHVKIED 97


>gi|302333673|gb|ADL23866.1| leukocidin/lemolysin toxin family protein [Staphylococcus aureus
           subsp. aureus JKD6159]
          Length = 351

 Score = 36.9 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 32/333 (9%), Positives = 88/333 (26%), Gaps = 28/333 (8%)

Query: 1   MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD--NSYAAVLI 58
           M+      +A +LS  I+             + + ++   + V +  Q +  N       
Sbjct: 1   MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKEKRNVTNKDKN 60

Query: 59  DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118
                 +  + ++  +  ++    + K     +L    +  D + +   V L+    + +
Sbjct: 61  SPVPDDIGKNGKITKRTETVY---DEKTNILQNLQF-DFIDDPTYD-KNVLLVKKQGSIH 115

Query: 119 AYFAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177
           +      +     +N     S    +    +        +L     +    + T S    
Sbjct: 116 SNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSG 175

Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNTFGVQEGFIAVLGDKSLVEQKYS 235
             F     +   S +    +       +    +   N + V    IA      L      
Sbjct: 176 GKFDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIA----NDLKYGGEV 231

Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295
                 +  +  +               + + E SF S+++Y +   + +  +F      
Sbjct: 232 KNRNDELLFYRNTRI-----------ATVENPELSFASKYRYPALVRSGFNPEFLTYLSN 280

Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328
               +            +    + +       P
Sbjct: 281 EKSNEKTQFEVTY---TRNQDILKNRPGIHYAP 310


>gi|90409129|ref|ZP_01217249.1| hypothetical protein PCNPT3_08330 [Psychromonas sp. CNPT3]
 gi|90309762|gb|EAS37927.1| hypothetical protein PCNPT3_08330 [Psychromonas sp. CNPT3]
          Length = 308

 Score = 36.9 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 7/76 (9%), Positives = 24/76 (31%)

Query: 4  NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63
            N  + +AL  I + ++  F+     +    + +  +         N+   +      +
Sbjct: 19 KRNVIIILALLCIAIGSYSYFFSQVPQQLAIEQTQEEKISDTLETNLNTEKPLSDKVLDE 78

Query: 64 ALSMSPRVELKNPSLI 79
             +   + +  P + 
Sbjct: 79 QSRVKADLIVATPKIT 94


>gi|23465352|ref|NP_695955.1| hypothetical protein BL0776 [Bifidobacterium longum NCC2705]
 gi|296454129|ref|YP_003661272.1| hypothetical protein BLJ_0976 [Bifidobacterium longum subsp. longum
           JDM301]
 gi|317483127|ref|ZP_07942125.1| inner membrane insertion protein [Bifidobacterium sp. 12_1_47BFAA]
 gi|23325994|gb|AAN24591.1| truncated stage III sporulation protein J (SpoIIIJ) homolog
           [Bifidobacterium longum NCC2705]
 gi|296183559|gb|ADH00441.1| hypothetical protein BLJ_0976 [Bifidobacterium longum subsp. longum
           JDM301]
 gi|316915426|gb|EFV36850.1| inner membrane insertion protein [Bifidobacterium sp. 12_1_47BFAA]
          Length = 82

 Score = 36.9 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQK 413
            + GIAIM   + +++   PL   Q  +T  M+ +QP+I  ++ K+         + +Q+
Sbjct: 3   HSLGIAIMCLVLIIRICLLPLFFSQMRATQRMQVLQPQIQRIQRKYAARKDPRSKEAMQR 62

Query: 414 AMIQLYKTHNINPLAGCW 431
            ++ L + HN NPL    
Sbjct: 63  EIMALQQRHNANPLGSYL 80


>gi|257867312|ref|ZP_05646965.1| ABC transporter [Enterococcus casseliflavus EC30]
 gi|257873645|ref|ZP_05653298.1| ABC transporter [Enterococcus casseliflavus EC10]
 gi|257801368|gb|EEV30298.1| ABC transporter [Enterococcus casseliflavus EC30]
 gi|257807809|gb|EEV36631.1| ABC transporter [Enterococcus casseliflavus EC10]
          Length = 569

 Score = 36.9 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 46/157 (29%), Gaps = 2/157 (1%)

Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386
           I    M+     F      +   +     +   + I ++L    + +      +      
Sbjct: 122 IQNLVMISLQSLFRIPFLFIGAFILAMTTMPQLWWIIVLLIIAVLVITALSFTRMGKHFM 181

Query: 387 ANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445
                I       +E        +   +   QL +   ++       I++   +F  +  
Sbjct: 182 IIQNLIDKINGIAKENLMGIRVVKSFVQEENQLQRFSKVSETLTKHNIIV-GTLFSVMIP 240

Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482
              ++  +       ++ DLA  DPT I  +   + +
Sbjct: 241 SFMLAANLAVVGAIFFVSDLAKDDPTLIGGIASFMNY 277


>gi|254369202|ref|ZP_04985214.1| preprotein translocase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157122152|gb|EDO66292.1| preprotein translocase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 645

 Score = 36.9 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 44/435 (10%), Positives = 114/435 (26%), Gaps = 29/435 (6%)

Query: 5   WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64
            N  + I L++ I YA  N +      +++ +  ++ T    +  +      +   +A  
Sbjct: 16  KNLLIVIILALAIFYALPNVFGKSPALQISQKDGDVTTQLLVSVENTLAKDKISYQKADI 75

Query: 65  LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE 123
                 + +                 +  L+   +   S +   +  +S  +    + + 
Sbjct: 76  ADDKSNIAITFKD------------VEEQLKAKKVLKDSLSDDYIIAMSMLSNSPNWLSA 123

Query: 124 LDYVSTANNIELPNSNTVW-----NLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178
           L        ++L     +             L  +  I L     N+I    +   +E  
Sbjct: 124 LGANPMNLGLDLRGGMYLMLEADTKTSIDAQLDNSLSIILSAAKDNSINISSSTKAEEKS 183

Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238
             K      +N    I  +    + + K   +T+    Q+  I      + V   Y+  +
Sbjct: 184 TIKAPQNYFDNGFVSITLANSVDVDKLKQYLSTDFIKTQDPNIIYTNKGNTVFISYNSAK 243

Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298
              +     S     + ++      I +   +  S  +   +                  
Sbjct: 244 ILQLKQDAISQVVTVMRNR------INALGVAEASVAQAGDNRVVIEIPGLQDATQAKQI 297

Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYN 355
               +T +F          +   E+   +   +    +  +Y     A      +     
Sbjct: 298 LGGTSTASFYLVNP-VADRLAAEEQGYKVYSLDNGRGYQSYYSLKGTAVAGGADIIGASP 356

Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKA 414
            +     A ++     +       +    +  N   +        + K K    + +   
Sbjct: 357 SIYRQTGAPIVMVELDRSAASHFRQITGKNIGNPMGVMLVNTTYEKVKDKDGKEKNVVSK 416

Query: 415 MIQLYKTHNINPLAG 429
             +L     I    G
Sbjct: 417 TEKLINVATIQSALG 431


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.310    0.108    0.280 

Lambda     K      H
   0.267   0.0332    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,298,659,054
Number of Sequences: 14124377
Number of extensions: 160638807
Number of successful extensions: 1259249
Number of sequences better than 10.0: 4603
Number of HSP's better than 10.0 without gapping: 3182
Number of HSP's successfully gapped in prelim test: 1421
Number of HSP's that attempted gapping in prelim test: 1240746
Number of HSP's gapped (non-prelim): 7721
length of query: 581
length of database: 4,842,793,630
effective HSP length: 145
effective length of query: 436
effective length of database: 2,794,758,965
effective search space: 1218514908740
effective search space used: 1218514908740
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 83 (36.9 bits)