BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780483|ref|YP_003064896.1| putative inner membrane protein translocase component YidC [Candidatus Liberibacter asiaticus str. psy62] (581 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|118589754|ref|ZP_01547159.1| putative inner membrane protein translocase component YidC [Stappia aggregata IAM 12614] gi|118437840|gb|EAV44476.1| putative inner membrane protein translocase component YidC [Stappia aggregata IAM 12614] Length = 606 Score = 486 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 252/600 (42%), Positives = 369/600 (61%), Gaps = 24/600 (4%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIE--------------------EMNNERKNIQT 42 N N +AI LS+I++ WQ F P++E ++ + + Sbjct: 4 ENRNTILAIVLSLIVLLGWQYFVAAPQLERQQAELQAQQEAAQQTATDSANPSKPQPTGS 63 Query: 43 VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + + +R AL+ S RV + PSL GS+NLKG + DD+ L+ YH V+ Sbjct: 64 QGANTAAPAAGQQMAFANREAALAASQRVTIDTPSLEGSVNLKGGRLDDIRLKDYHETVN 123 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 +SP + L SPS + Y+A+ +V N+ LP +TVW++ LTP+TP+ L + Sbjct: 124 KSSPTIVLFSPSGSPKPYYADYGWVGDPGTNLALPGPDTVWSVDGEATLTPSTPLTLSWD 183 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 N ++F+RT S+D++Y+F + +V N D + P G I R + + EG + Sbjct: 184 NGAGLIFKRTFSVDDNYMFTVNQSVENTGSDAVTLYPYGLIARKGMPETNGIYILHEGLL 243 Query: 222 AVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 V G + L E Y D+ + S I WLGI+DKYWA+ IP+ F F + S Sbjct: 244 GVFGAEGLKEVDYDDLVEESSIRPSKVDQGWLGITDKYWAATLIPTPGQEFQPGFSH-SA 302 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 +QA + N +T+ G + T+++LFAGAKE + YE+ L+I RFE+LIDWGWFY Sbjct: 303 TTDVFQADYLGNGVTVAGGSTGETSSYLFAGAKETKLLDGYEEALSIERFELLIDWGWFY 362 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ KPMF + YF++L GNFG+AI++ TV VKL+FFPLA K YVS + MK +QP++ E+R Sbjct: 363 FLTKPMFFAIDYFFHLFGNFGVAILVVTVIVKLIFFPLANKSYVSMSKMKLVQPQMTEIR 422 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+ Q Q+A+++LYK INPLAGC PI++QIPVFF++YKV+ +++EMRHAPF+G Sbjct: 423 EKYSD-DRQKQQQALMELYKKEKINPLAGCLPIVVQIPVFFSLYKVLYVTIEMRHAPFFG 481 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI+DL+A DPT +F LFG++P+ P + +G+WP+IM ++MFIQMKM+P P D Q MI Sbjct: 482 WIQDLSAPDPTTLFNLFGLIPWDPPQMLMLGVWPLIMGITMFIQMKMNPAPPDPTQQMIF 541 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 WMPV+F F L+SFPAGL+IYW+W+N +S+ QQ VIM+ GA++ L D L S F + + Sbjct: 542 TWMPVIFTFMLASFPAGLVIYWAWNNTLSVTQQYVIMRRQGAKVELWDNLGSLFKRKKAA 601 >gi|307943178|ref|ZP_07658523.1| inner membrane protein OxaA [Roseibium sp. TrichSKD4] gi|307773974|gb|EFO33190.1| inner membrane protein OxaA [Roseibium sp. TrichSKD4] Length = 603 Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 246/597 (41%), Positives = 360/597 (60%), Gaps = 21/597 (3%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEE-----------------MNNERKNIQTVKQ 45 N N +AIALS+ ++ AWQ F P++E+ Sbjct: 4 ENRNTLLAIALSLAVLLAWQYFVAQPQLEKQQAALQAQQAAEQAQSDPQRPSAQNAPGAA 63 Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 ++ R QA++ S RV L P L GS+NL G + DD+ L+ YH V +S Sbjct: 64 TTGAPSASGQEQFQTREQAIAASERVTLDTPRLSGSVNLVGGRIDDIRLKDYHETVDKSS 123 Query: 106 PIVTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 P V L SP + ++A+ +VS ++ LP ++TVW+ +G LTP TP+ L F N Sbjct: 124 PTVVLFSPKGSPEPFYADYGWVSDPGADVALPGADTVWSAPAGAQLTPNTPLTLTFDNGG 183 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F+RT S+DE+Y+F + +V N+ + + P G + R TN + + EG + V Sbjct: 184 GLTFKRTFSIDENYMFSVTQSVENSGSEAVTLYPYGLLARTGQPETTNFYILHEGLLGVF 243 Query: 225 GDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 G++ L E Y D+ ++ + WLGI+DKYWA+ +P +F F + + Sbjct: 244 GEEGLKEVDYDDLAETGVDRPGKVDRGWLGITDKYWAATLVPEPGQTFQPSFTHSNV-TD 302 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 YQA F + + I G + ++LFAGAKE + YE L I +FE+LIDWGWFYF+ Sbjct: 303 NYQADFLGSAVVIAAGSTSEANSYLFAGAKETKLLDSYEATLNIEQFELLIDWGWFYFLT 362 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KPMF + + + + GNFG+AI+L TV +KL+FFPLA K YVS + MK +QP++ E+R+++ Sbjct: 363 KPMFFAIDWLFMMFGNFGVAILLVTVAIKLVFFPLANKSYVSMSKMKLVQPQMQEIRDRY 422 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 + Q+A+++LYK INPLAGC PIL+QIPVFFA+YKV+ +++EMRHAPF+GWI+ Sbjct: 423 GDDKAK-QQQALMELYKKEKINPLAGCLPILIQIPVFFALYKVLFVTIEMRHAPFFGWIQ 481 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+A DPT IF LFG++P+ P + VGIWP++M ++MF+QMKM+P P D Q MI WM Sbjct: 482 DLSAPDPTTIFNLFGMIPWDPPQLLTVGIWPLLMGITMFVQMKMNPAPPDPTQQMIFTWM 541 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 P++F F L+SFPAGL+IYW+W+N +SI QQ VIM G ++ L D L+STF + Sbjct: 542 PIIFTFMLASFPAGLVIYWAWNNFLSIAQQWVIMSRQGVKVELFDNLKSTFKRKPAK 598 >gi|254502069|ref|ZP_05114220.1| 60Kd inner membrane protein [Labrenzia alexandrii DFL-11] gi|222438140|gb|EEE44819.1| 60Kd inner membrane protein [Labrenzia alexandrii DFL-11] Length = 608 Score = 485 bits (1247), Expect = e-134, Method: Composition-based stats. Identities = 257/602 (42%), Positives = 368/602 (61%), Gaps = 26/602 (4%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEE----------------------MNNERKNI 40 N N +AI LS+I++ AWQ FY P++E + Sbjct: 4 ENRNTILAIVLSLIVLLAWQYFYAGPQLERQQAALQAQQEAEAAQQSAPGGVNPDAPTPS 63 Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 ++ + R QALS + RV + P L GSINL G + DDL L+ YH Sbjct: 64 VAGSGTTVAPSATSPQGFASREQALSATQRVVIDTPRLEGSINLTGGRLDDLRLKDYHET 123 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLV 159 V +SP + L SP+ + N Y+++ +V+ A +I LP +T+W++ LTP+TP+ L Sbjct: 124 VDRSSPTIVLFSPTGSPNPYYSDYGWVADAGASITLPGPDTIWSVNGSSDLTPSTPLTLS 183 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N ++F RT S+DE+Y+F + +VTNNS D + P G I R T + + EG Sbjct: 184 WDNGEGLVFNRTFSVDENYMFDVTQSVTNNSGDVVTLYPYGLIARKGIPETTGIWILHEG 243 Query: 220 FIAVLGDKSLVEQKYSDIEKS-SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + V G++ LVE YSD+E+ + WLGI+DKYWA+ IP+ F F Y Sbjct: 244 LLGVFGEEGLVEVDYSDLEEDGPVRPAAVDRGWLGITDKYWAATLIPTPGQEFQPGFSYA 303 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + +QA + N + + G T+++LFAGAKE + YE L+I RFE+LIDWGW Sbjct: 304 AQSGN-FQADYLGNAVVVPAGGVGETSSYLFAGAKETNLLDAYEASLSIERFELLIDWGW 362 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FYF+ KPMF + + ++ GNFG+AI+L TV +KL FFPLA K YVS + MK +QP++ E Sbjct: 363 FYFLTKPMFYAIDFLFHYFGNFGVAILLVTVIIKLFFFPLANKSYVSMSKMKLVQPQMTE 422 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+ Q Q+A+++LYK INPLAGC PIL+QIPVFFA+YKV+ +++EMRHAPF Sbjct: 423 IREKYAD-DRQKQQQALMELYKKEKINPLAGCLPILIQIPVFFALYKVLFVTIEMRHAPF 481 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI+DL+A DPT++F LFG++P+ P + +G+WP+IM ++MF+QMKM+P P D Q M Sbjct: 482 FGWIQDLSAPDPTSLFNLFGLIPWDPPQLLMLGVWPLIMGITMFVQMKMNPAPPDPTQQM 541 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I WMPVVF F L+SFPAGL+IYW+W+N +SI QQ VIM G ++ L D + S F + Sbjct: 542 IFTWMPVVFTFMLASFPAGLVIYWAWNNSLSIAQQWVIMSRQGVKVELWDNIGSMFKRKK 601 Query: 579 NS 580 + Sbjct: 602 PA 603 >gi|241202849|ref|YP_002973945.1| inner membrane protein translocase component YidC [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856739|gb|ACS54406.1| 60 kDa inner membrane insertion protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 597 Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats. Identities = 287/593 (48%), Positives = 385/593 (64%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI----------------QTVK 44 ME N NYF+AIALSV+IV WQ Y+ PRIE ++ QT Sbjct: 1 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKVQEAQKAQQQTEQVQQPAAGGQTPA 60 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 QP+ + A QAL+ SPRV + +L GSINL GA+ DDL L+GYH V + Sbjct: 61 QPSGAAPTSQAAATATLEQALAKSPRVVIDTAALSGSINLAGARLDDLKLKGYHETVDDS 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SPI+TL SP+ TK+ YF EL Y+ + +P +T+W G LT TP+ L + N Sbjct: 121 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGPSTLWTAPEGAKLTEKTPVTLSYTNDK 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F + D + N + GR+ R+ T + + + EGFI V+ Sbjct: 181 GLTFTRTISVDERYMFTVADKIENAGQAPASLNSYGRVTRYNKPTTPSVYVLHEGFIGVI 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD LVE KY+ EK ++ + WLGI+DKYWA+ +P + + + F + +DG R Sbjct: 241 GDDGLVETKYTAAEKEAVKPAKSTGGWLGITDKYWAATIVPPQSAPYEASFSHFADGQPR 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + T+ PG+SI N +FAGAKE P I YE +IP+F+ LIDWGWFYFI K Sbjct: 301 YQADYKEDAFTVAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPKFDRLIDWGWFYFITK 360 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +F+ GNFG+AI+ TT+ VKLLFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 361 PMFKLMDFFFRYFGNFGVAILCTTIVVKLLFFPLASKQYASMANMKRMQPKMEELKAKFA 420 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD Sbjct: 421 D-DRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 479 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P +H+G+WP+IM ++MF+QM+M+P P D QAMI WMP Sbjct: 480 LSAPDPTTIVNLFGLLPFEAPTILHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFTWMP 539 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S+ QQ+VIMK HG ++ L D L+ F + Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVAQQSVIMKRHGVKVELFDNLKGLFRRK 592 >gi|150395307|ref|YP_001325774.1| putative inner membrane protein translocase component YidC [Sinorhizobium medicae WSM419] gi|166977420|sp|A6U5K9|OXAA_SINMW RecName: Full=Inner membrane protein oxaA gi|150026822|gb|ABR58939.1| 60 kDa inner membrane insertion protein [Sinorhizobium medicae WSM419] Length = 597 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 289/594 (48%), Positives = 395/594 (66%), Gaps = 16/594 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA------ 54 ME N NYFVAIALSV+I+ AWQ FYV P++E+ + Q + + Sbjct: 2 MENNRNYFVAIALSVLILIAWQFFYVSPKMEKDRIAAEKAQQAQSQPGTQQAAPGQAAPG 61 Query: 55 --------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + R QA+ S RV + P+L GSINL GA+FDDL L+GY V SP Sbjct: 62 QALPGGAIPSAAESRDQAIGKSARVAIDTPALSGSINLTGARFDDLKLKGYRETVDPKSP 121 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 ++TL SP+ T + YF E+ Y+ + +P TVW L G LTP+TP+ L + N I Sbjct: 122 VITLFSPAETADGYFTEIGYIGSDATGSVPGPQTVWMLSGGDKLTPSTPVTLSYTNDKGI 181 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 F RTIS+D+ Y+F++VD++ N++ + S GR+ R + + + + EGF+ V G+ Sbjct: 182 TFTRTISVDDRYMFEVVDSIKNDAAAAVSLSSYGRVTRFNKPSTPSIYVLHEGFVGVAGE 241 Query: 227 KSLVEQKYSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 L E YSD+E +S WLGI+DKYWA+ +P ++T F +F + +DG RY Sbjct: 242 HGLQEVGYSDVEDEEPVEPGKSTGGWLGITDKYWAATIVPPQDTPFDIRFSHFADGRPRY 301 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 Q+ + ++ +T+ PG+S N +FAGAKE P + +YE +IP F+ LIDWGWFYFI KP Sbjct: 302 QSDYKSDAVTVAPGQSAEVKNLIFAGAKEVPVVDNYELTYSIPNFDKLIDWGWFYFITKP 361 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 MF +M +F+ L GNFGIAI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF Sbjct: 362 MFKMMDFFFRLFGNFGIAILITTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGD 421 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 LQ+AM+QLYK INPLAGCWPIL+QIPVFFA+YKVI +++EMRHAPF+GWI+DL Sbjct: 422 -DRMGLQQAMMQLYKEEKINPLAGCWPILIQIPVFFALYKVIYVTIEMRHAPFFGWIQDL 480 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 +A DPT I LFG+LPF P F+H+GIWPI+M ++MF+QM+M+P P D QAM+ WMPV Sbjct: 481 SAPDPTTIINLFGLLPFEGPAFLHLGIWPIVMGVTMFLQMRMNPTPPDPTQAMLFTWMPV 540 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 VF F L+SFPAGL+IYW+W+N +SI+QQ +IMK G ++ L D L+S FSK Sbjct: 541 VFTFMLASFPAGLVIYWAWNNTLSILQQGIIMKRQGVKVELFDNLKSLFSKKPK 594 >gi|220925223|ref|YP_002500525.1| YidC translocase/secretase [Methylobacterium nodulans ORS 2060] gi|254773002|sp|B8IMM9|OXAA_METNO RecName: Full=Inner membrane protein oxaA gi|219949830|gb|ACL60222.1| YidC translocase/secretase [Methylobacterium nodulans ORS 2060] Length = 605 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 243/602 (40%), Positives = 362/602 (60%), Gaps = 25/602 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA------- 54 N +AIALS+ ++ W F P++E ++ P + S Sbjct: 3 NDKTNMIIAIALSLAVLLGWNYFVAAPQVERQRQQQAQTSASPSPKEGGPSAPVPGTLPG 62 Query: 55 -----AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 R +AL+ SPRV + +L GS+ LKG + DD+ L+GYH V SP + Sbjct: 63 ASGGNPQAALTREEALARSPRVRIDTEALKGSVALKGGRIDDVALKGYHETVDPKSPEIV 122 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 LLSP+ + N Y+AE +V LPN +TVW G +LT P+ L + N ++F Sbjct: 123 LLSPAGSANPYYAEFGWVGQGAGP-LPNGDTVWT-ADGDLLTAKKPLTLTWDNGAGLVFR 180 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 RT+S+D+ Y+F + D+V N + P G + R + + EG I VLGDK L Sbjct: 181 RTLSVDDKYMFTVEDSVENKGQSAVTLYPYGLVSRWGKPHTQGYYVLHEGLIGVLGDKGL 240 Query: 230 VEQKYSDIEKSS---------ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 E Y + K + +S + +LGI+DKYWA+ IP ++T + F + Sbjct: 241 QEYTYDKMAKENPLGSPGTRGLSWPGVTGGFLGITDKYWAAATIPDQKTPYTGSFTERDE 300 Query: 281 GHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G + YQ T+ PG + + LFAGAKE TI Y + L I +F+++IDWGWF Sbjct: 301 GATKVYQTSSLGEARTLAPGAGVQASQHLFAGAKEVSTIDAYRQKLDIKQFDLMIDWGWF 360 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YFI KPMF + +FY L GNFG++I++ T+ +KL F P+A + YVS A MK +QP++ + Sbjct: 361 YFITKPMFKALDFFYKLFGNFGVSILVVTLILKLFFLPIANRSYVSMAKMKAVQPEMTAI 420 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE++ + Q+AM++LY+ INP+AGCWP+++QIPVFFA+YKV+ +++EMRHAPF+ Sbjct: 421 RERYADDKVK-QQQAMMELYRKEKINPVAGCWPVVIQIPVFFALYKVLFVTIEMRHAPFF 479 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 GWI+DLAA DPT++ LFG+LPF P +H+G+WPI+M ++MF+QMKM+P P D QA + Sbjct: 480 GWIRDLAAPDPTSVLNLFGLLPFAAPDLVHLGVWPIVMGITMFLQMKMNPAPPDPVQAQV 539 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 +MP++F F L SFPAGL+IYW+W+N++SI+QQ IM+ +G ++ L D LR+TFS++ Sbjct: 540 FTFMPIIFTFMLGSFPAGLVIYWAWNNLLSILQQYWIMRRNGVKVELWDNLRTTFSRSSP 599 Query: 580 SQ 581 + Sbjct: 600 VK 601 >gi|116250222|ref|YP_766060.1| inner membrane protein translocase component YidC [Rhizobium leguminosarum bv. viciae 3841] gi|166977404|sp|Q1MM58|OXAA_RHIL3 RecName: Full=Inner membrane protein oxaA gi|115254870|emb|CAK05944.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 598 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 289/593 (48%), Positives = 384/593 (64%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----------------ERKNIQTVK 44 ME N NYF+AIALSV+IV WQ Y+ PRIE QT Sbjct: 2 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGQTPA 61 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 Q + S A QAL SPRV + P+L GSINL GA+ DDL L+GYH V + Sbjct: 62 QTSGAAPSGQAAATATLEQALQKSPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDS 121 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SPI+TL SP+ TK+ YF EL Y+ + +P +T+W G LT TP+ L + N Sbjct: 122 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGPSTLWTAPEGAKLTEKTPVTLSYTNDK 181 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F + D + N S GR+ R+ T + + + EGFI V+ Sbjct: 182 GLTFTRTISVDERYMFTVADKIENTGQAPAALSSYGRVTRYNKPTTPSVYVLHEGFIGVI 241 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD L+E KYS +EK +++ + WLGI+DKYWA+ +P + ++ + F Y +DG R Sbjct: 242 GDDGLIETKYSAVEKEAVAPAKSTGGWLGITDKYWAATIVPPQSAAYEAHFSYFADGQPR 301 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + T+ PG+SI N +FAGAKE P I YE +IP+F+ LIDWGWFYFI K Sbjct: 302 YQADYKDDAFTVAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPKFDRLIDWGWFYFITK 361 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +F+ GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 362 PMFKLMDFFFRYFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFA 421 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD Sbjct: 422 D-DRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 480 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P +H+G+WP+IM ++MF+QM+M+P P D QAMI NWMP Sbjct: 481 LSAPDPTTIVNLFGLLPFEGPTLLHLGVWPLIMGVTMFVQMRMNPTPPDPTQAMIFNWMP 540 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S+ QQ +IMK HG ++ L D L+ F + Sbjct: 541 LVFMFMLASFPAGLVIYWAWNNTLSVAQQGLIMKRHGVKVELFDNLKGLFRRK 593 >gi|153008692|ref|YP_001369907.1| putative inner membrane protein translocase component YidC [Ochrobactrum anthropi ATCC 49188] gi|151560580|gb|ABS14078.1| 60 kDa inner membrane insertion protein [Ochrobactrum anthropi ATCC 49188] Length = 607 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 273/604 (45%), Positives = 380/604 (62%), Gaps = 26/604 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41 ME N N+F+ IALS++++ WQ FY+ P+ E + + + Sbjct: 1 MENNRNFFITIALSILVLTLWQVFYLGPKTEAQREQARIEEQQQQKQQATQQQAQSGDTP 60 Query: 42 ----TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 T + AA R A++ + RVE+ PSL GSINL GA+ DDL L+ Y Sbjct: 61 QMPATSGNIPGHSDVAAAGGTLTREAAVAQTQRVEIDTPSLRGSINLTGARLDDLFLKRY 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 H V NSP + LL+PS K YF EL + +P NTVW + LTP+TP+ Sbjct: 121 HETVDDNSPQIELLAPSALKQGYFVELGFTGNDTTGPVPGPNTVWTVEGNNKLTPSTPVT 180 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNTFGV 216 L + N NI F+R IS+D+ Y+F + DT+TNN+ I + GR+ ++P+ A+ T+ + Sbjct: 181 LTYTNEKNITFKRVISVDDAYMFAVEDTITNNTGAPISLASYGRVTRFNQPEHASATYVL 240 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 EG I V+G L E KYS +E IS S WLGI+DKYWA+ +P ++ F +F Sbjct: 241 HEGLIGVMGQDGLQEIKYSKVEDDKDISFKDVSGGWLGITDKYWAATLVPPQDEKFTGRF 300 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + ++ RYQ F +TI PG++ T N +FAGAK I YE+ L I +FE+LID Sbjct: 301 SHFTNDRPRYQTDFLGAPMTIAPGQAQTLKNHVFAGAKVVSNIKAYEEKLGIKQFELLID 360 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK +QPK Sbjct: 361 WGWFYFITKPMFYLIDWIYKFSGNFGVAILVVTVLLKGLFFPLANKSYKSMARMKLVQPK 420 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + E+REK+ + Q+ M++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++EMRH Sbjct: 421 LTEIREKYADDKMK-QQQEMMRLYKEEKINPLAGCWPVLVQIPVFFALYKVLYVTIEMRH 479 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 APF+GWI+DLAA DPT++F LFG+LPF +P F+ +G+WP++M ++MF+QM+M+P P D Sbjct: 480 APFFGWIQDLAAPDPTSLFNLFGLLPFGVPHFLMIGVWPLLMGITMFLQMRMNPTPPDPT 539 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 QA I WMPV+F F L+SFPAGL+IYW+W+N++SI QQ +IMK G +I L D L+ F Sbjct: 540 QAAIFTWMPVIFTFMLASFPAGLVIYWAWNNLLSITQQGIIMKRQGVKIELFDNLKGLFK 599 Query: 576 KNYN 579 + Sbjct: 600 RKPK 603 >gi|110632737|ref|YP_672945.1| putative inner membrane protein translocase component YidC [Mesorhizobium sp. BNC1] gi|110283721|gb|ABG61780.1| protein translocase subunit yidC [Chelativorans sp. BNC1] Length = 609 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 271/607 (44%), Positives = 369/607 (60%), Gaps = 29/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------- 45 ME N N + IALSV+I+ WQ FYV PR++ + Q Sbjct: 1 MENNRNLLITIALSVVILTLWQVFYVNPRVDAQREAAQIEAQRAQETEEKLGTQGADIPA 60 Query: 46 ------PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 V S R +AL+ + RV + P L G+INL GA+ DDL L+ Y + Sbjct: 61 PGATPGSTAVPGSAIPRTQVTRQEALAGAERVTIDTPRLAGTINLAGARLDDLLLKDYRV 120 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 V +SP + LL P+ YF E+ Y A+ +P +TVW L G L+P +P+ L Sbjct: 121 TVDKDSPNIDLLGPAGLPEGYFVEVGYTGNASTGAVPGPDTVWQLQEGSTLSPGSPVTLS 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 F N + F RT ++DE+YLF I DT+ N + + + GR R + + EG Sbjct: 181 FTNDRGLTFLRTFAVDENYLFTITDTIRNAAGEPVEIRNYGRTTRFGQPKTAGIYILHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYL 278 FI VLG++ L E YS ++ +S + WLGI+DKYWA +P + F +F Y Sbjct: 241 FIGVLGEEGLREVDYSTAQEDGQVLPGKSADGWLGITDKYWAVTMVPRAQKDFEPRFAYF 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 SDG RYQA + + +T+ PG +FAGAKE + YE I +FE+LIDWGW Sbjct: 301 SDGRERYQADYLTDPVTVAPGGEAKIETLVFAGAKEVHVVDAYETQHNIRQFELLIDWGW 360 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FYFI KPMF L+ + + L+GNFG+AI+ TTVFVKL+FFPLA K Y S ANMK +QP + E Sbjct: 361 FYFITKPMFYLIDWLFRLLGNFGVAILATTVFVKLVFFPLANKSYKSMANMKKVQPALLE 420 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+ + Q+AM++LYK INPLAGCWPIL+QIPVFFA+YKV+ +++EMRHAPF Sbjct: 421 IREKYADDKMK-QQQAMMELYKKEKINPLAGCWPILIQIPVFFALYKVLYVTIEMRHAPF 479 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPA 512 +GWI+DL+A DPT IF LFG+LPF F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 FGWIQDLSAPDPTTIFNLFGLLPFDPSQVPVFGPFLMLGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QAMI NWMPV+F F L++FPAGL+IYW+W+N++SI+QQ VIMK GA+I L D + + Sbjct: 540 DPTQAMIFNWMPVIFTFMLATFPAGLVIYWAWNNLLSIIQQGVIMKRQGAKIELWDNMVN 599 Query: 573 TFSKNYN 579 F + Sbjct: 600 LFRRKPK 606 >gi|209547692|ref|YP_002279609.1| inner membrane protein translocase component YidC [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533448|gb|ACI53383.1| 60 kDa inner membrane insertion protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 597 Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 288/593 (48%), Positives = 391/593 (65%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 ME+N NYF+AIALSV+IV WQ Y+ PRIE ++ + ++ QV Sbjct: 1 MEKNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQKTEQVQQPAANGAAPA 60 Query: 52 -------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 S AV QAL+ +PRV + P+L GSINL GA+ DDL L+GYH V + Sbjct: 61 PTSGTAPSGQAVATATLEQALAKNPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDS 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SP +TL SP+ TK+ YF EL Y+ + +P ++T+W G LT TP+ L + N Sbjct: 121 SPTITLFSPAETKDGYFTELGYIGSDATGNVPGASTLWTAPEGAKLTDKTPVTLSYTNDK 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F + D V N + S GR+ R+ T + + + EGFI V+ Sbjct: 181 GLTFTRTISVDERYMFTVADKVENTGQAPVSLSSYGRVTRYNKPTTPSVYVLHEGFIGVI 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD LVE KY+ EK ++ + WLGI+DKYWA+ IP + +++ ++F + +DG R Sbjct: 241 GDDGLVETKYTAAEKEAVMPPKSTGGWLGITDKYWAATIIPPQTSAYEARFSHFADGQPR 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + T+ PG+SI N +FAGAKE P I YE +IP+F+ LIDWGWFYFI K Sbjct: 301 YQADYKDDAFTVAPGQSIELKNLVFAGAKEVPVIDGYETSYSIPKFDRLIDWGWFYFITK 360 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +FY GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 361 PMFKLMDFFYRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFA 420 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD Sbjct: 421 D-DRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 479 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P +H+G+WP+IM ++MF+QM+M+P P D QAMI WMP Sbjct: 480 LSAPDPTTIVNLFGLLPFEAPTILHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFTWMP 539 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK G ++ L D L+ F + Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRQGVKVELFDNLKGLFRRK 592 >gi|86356094|ref|YP_467986.1| putative inner membrane protein translocase component YidC [Rhizobium etli CFN 42] gi|86280196|gb|ABC89259.1| putative inner membrane transmembrane protein [Rhizobium etli CFN 42] Length = 597 Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 293/593 (49%), Positives = 389/593 (65%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----------------ERKNIQTVK 44 ME N NYF+AIALSV+IV WQ Y+ PRIE Q Sbjct: 1 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQTQQPAAGGQAPA 60 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 Q + S A R QAL +PR+ + +L GSINL GA+ DDL L+GYH V + Sbjct: 61 QTSGAAPSGQAAATATREQALEKTPRIAIDTAALSGSINLAGARLDDLKLKGYHETVDDS 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SP +TL SP+ TK+ YF EL Y+ + +P +T+W G LT TP+ L + N Sbjct: 121 SPTITLFSPAETKDGYFTELGYIGSDTTGAVPGPSTLWTAPEGAKLTEKTPVTLSYTNDK 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F + D + N S GR+MR+ T + + + EGFI V+ Sbjct: 181 GLTFTRTISVDERYMFTVADKIENTGQAPAALSSYGRVMRYNKPTTPSVYVLHEGFIGVI 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD L+E KYS +EK ++S + WLGI+DKYWA+ +P + +++ ++F Y SDG R Sbjct: 241 GDDGLIESKYSAVEKEAVSPAKSAGGWLGITDKYWAATIVPPQSSAYEAKFSYFSDGQPR 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + ++ PG+SI N +FAGAKE P I YE +IP+F+ LIDWGWFYFI K Sbjct: 301 YQADYKNDAFSVAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPKFDRLIDWGWFYFITK 360 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +FY GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 361 PMFKLMDFFYRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFG 420 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+AM+QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWIKD Sbjct: 421 D-DRMGLQQAMMQLYKDEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKD 479 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P F+H+G+WP+IM ++MF+QM+M+P P D QAMI NWMP Sbjct: 480 LSAPDPTTIVNLFGLLPFEAPTFLHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFNWMP 539 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK HG +I L D LR F + Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRHGVKIELFDNLRGLFRRK 592 >gi|328545250|ref|YP_004305359.1| transmembrane protein, OxaA-like, preprotein translocase component [polymorphum gilvum SL003B-26A1] gi|326414992|gb|ADZ72055.1| Transmembrane protein, OxaA-like, preprotein translocase component [Polymorphum gilvum SL003B-26A1] Length = 607 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 258/603 (42%), Positives = 365/603 (60%), Gaps = 26/603 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE----------------------EMNNERK 38 M N N F+AIALS++++ WQ F P++E Sbjct: 1 MADNRNTFLAIALSLVVLLGWQYFVARPQLERQQAELAQQDAQQQAAGQDAQAPTPGATA 60 Query: 39 NIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 + + A + R AL S RV ++ P + GSINL GA+ DDL L+ Y Sbjct: 61 PGSLPAPGSTAPAAGAQPVALTREAALGTSARVTIETPRVSGSINLAGARIDDLRLKDYR 120 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKILTPTTPIK 157 V SP + L SP Y+A+ +V+ + LP +++W++ LTP TP+ Sbjct: 121 ETVDPKSPTIVLFSPKGGPKPYYADFGWVTDGTKTVALPGPDSLWSVEGSDRLTPQTPVT 180 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 L F N ++F+RT ++DE+Y+F + V N + + IR P G I+R + + Sbjct: 181 LTFDNGEGLVFKRTFTIDENYMFSVSQEVVNGTQEAIRLFPYGLIVRRGKPETAGFYILH 240 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFK 276 EG I V G+K L E YSD+E+ + WLGI+DKYWA+ IP +SF F Sbjct: 241 EGLIGVFGEKGLQEVDYSDVEEDGQIRPGQVDSGWLGITDKYWAATLIPMPGSSFQPSFG 300 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 Y +QA F + + G S + +++LFAGAKE I YE+ L I RFE+LIDW Sbjct: 301 YT-ATTDNFQADFLGAAVDVASGASGSASSYLFAGAKETKVIDAYEEALNIARFELLIDW 359 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GWFYF+ KPMF ++ + ++LVGNFGIAI+L TV VKL+FFPLA K YVS + MK +QP++ Sbjct: 360 GWFYFLTKPMFFVIDWLFHLVGNFGIAILLVTVLVKLVFFPLANKSYVSMSKMKLVQPQM 419 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E+R+++K + Q+A+++LYK INPLAGC PIL+QIPVFFA+YKV+ +++EMRHA Sbjct: 420 TEIRDRYKDDKAK-QQQALMELYKKEKINPLAGCLPILIQIPVFFALYKVLFVTIEMRHA 478 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 PF+GWI+DL+A DPT IF LFG++P+ P + +GIWP+IM ++MF+QMKM+P P D Q Sbjct: 479 PFFGWIQDLSAPDPTTIFNLFGLIPWDPPQMLMLGIWPLIMGVTMFVQMKMNPAPPDPTQ 538 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 MI WMPV+F F L+SFPAGL+IYW+W+N +SI QQ VIM+ GA++ L D L+ TF + Sbjct: 539 QMIFTWMPVIFTFMLASFPAGLVIYWAWNNSLSIAQQYVIMRRQGAKVELWDNLKITFKR 598 Query: 577 NYN 579 Sbjct: 599 KKP 601 >gi|114706827|ref|ZP_01439727.1| putative inner membrane transmembrane protein [Fulvimarina pelagi HTCC2506] gi|114537775|gb|EAU40899.1| putative inner membrane transmembrane protein [Fulvimarina pelagi HTCC2506] Length = 603 Score = 477 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 274/601 (45%), Positives = 373/601 (62%), Gaps = 24/601 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------TVKQPNQVDNSYA 54 ME N N+ +A+ALS++++ WQ + PR++E + + Q T + P D Sbjct: 1 MEMNRNFLIAMALSIMVLVGWQFLVIGPRMDEQQRQNEIAQNEGSLQTPQTPAGSDQDSL 60 Query: 55 AVLI--------------DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 R Q ++ RV + P L GSINL GA+ DDL L+ YH Sbjct: 61 TAPSGRESMVPSPNLPQNQSREQVIAGGNRVTIDTPELTGSINLTGARLDDLRLKHYHET 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 V +SP + LLSP N YFAE + +L +NT W G LTP TP+ L Sbjct: 121 VDDSSPTIVLLSPEELPNGYFAEYGLIQPGTG-QLVGANTEWQAEDGAELTPDTPVTLTA 179 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + + R IS+D++++F DTV N ++ SP GRI R+ F + EG Sbjct: 180 TTESGLTVTRRISVDDNFMFTYEDTVENTGDAAVQVSPYGRIARYSKPEVAAAFVLFEGL 239 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNS--WLGISDKYWASVFIPSKETSFHSQFKYL 278 + V G++ L E YSDIE + S+ WLGI+DKYWA+ +P F SQF Y Sbjct: 240 LGVFGEEGLDEVSYSDIEDDTRLRQPASSGGGWLGITDKYWATALVPEVGRDFESQFLYR 299 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 ++G + YQ +F ++ ++I PG + + N FAGAKE I+ YE+ L I +F LIDWGW Sbjct: 300 TNGRSHYQTEFVSDPVSIAPGAAASMVNRTFAGAKEVDKINAYEEQLNIRQFGQLIDWGW 359 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FYFI +PMF + Y Y LVGNFGIAI+ TV +KL+FFPLA K Y S A MK IQPK+ E Sbjct: 360 FYFITRPMFTALDYIYRLVGNFGIAILAVTVILKLIFFPLANKSYKSMARMKTIQPKVME 419 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 LRE+FK Q Q+ M+QLY++ INP AGCWPIL+QIPVFFA+YKV+ +++EMRHAPF Sbjct: 420 LRERFKD-DRQKQQQEMMQLYRSEKINPAAGCWPILIQIPVFFALYKVLYVTIEMRHAPF 478 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI+DLAA DPT+IF LFG+LP+ +PG + +G+WP++M L+MFIQM+++P P D QAM Sbjct: 479 FGWIQDLAAPDPTSIFNLFGLLPYDVPGILLIGVWPLLMGLTMFIQMRLNPTPPDPTQAM 538 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I WMPVVF F L++FPAGL+IYW+W+N +SI+QQ+VIMK +GA+I L D LR F + Sbjct: 539 IFTWMPVVFTFMLATFPAGLVIYWTWNNFLSIIQQSVIMKRNGAKIELFDNLRGMFKRKE 598 Query: 579 N 579 Sbjct: 599 K 599 >gi|90419893|ref|ZP_01227802.1| putative inner membrane protein [Aurantimonas manganoxydans SI85-9A1] gi|90335934|gb|EAS49682.1| putative inner membrane protein [Aurantimonas manganoxydans SI85-9A1] Length = 609 Score = 477 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 264/607 (43%), Positives = 370/607 (60%), Gaps = 30/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ-----------TVKQPNQV 49 M+ N N+ +A+ LS+ ++ WQ V PR+E E + Q T + P Sbjct: 1 MQNNRNFLIAMILSIGVLVGWQFLVVSPRMEAQRLETEAAQPTVAQNDGSLQTPQTPAGT 60 Query: 50 DNSYAAVLI----------------DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 A + R QA++ RV + P+L GSINL GA+ DDL Sbjct: 61 PQDNVAAPAGRESVVPEQDALPATDETREQAIAAGSRVAIDTPALSGSINLTGARLDDLR 120 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ YH V +SP + LLSP + YFAE Y+ ELP +T+W G+ LTP Sbjct: 121 LKNYHETVDDSSPTIVLLSPERLPSGYFAEFGYLGRDAG-ELPGPSTIWQAEGGQSLTPN 179 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 +P+ L N + FERTIS+D+ ++F DT+ N + S GR+ R+ + Sbjct: 180 SPVTLTATNGAGVTFERTISVDDRFMFTYEDTIRNEGSAPLTLSSYGRVTRYSKPEVASV 239 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + EG + V GD L E KYS IE + S+ WLGI+DKYWA+ +P F Sbjct: 240 YVLFEGLLGVFGDDGLSEIKYSTIEDDQRYTPPKSSSGWLGITDKYWATTLVPEAGRPFQ 299 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 S+F Y++DG YQ ++ + +T+ PG + T + FAGAK I YE+ I +F Sbjct: 300 SRFLYMTDGRPHYQTEYVTDPVTVEPGATATNVSRTFAGAKVVSDIDSYEERYDIRQFGQ 359 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI +PMF + + Y+++GNFG+AI+ TV +KL+FFPLA K Y S A MKN+ Sbjct: 360 LIDWGWFYFITRPMFHALDWLYSVIGNFGVAILAVTVVLKLIFFPLANKSYKSMARMKNM 419 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPKI E+RE+FK Q Q+ M+++Y+ INP AGCWPIL+QIPVFFA+YKV+ +++E Sbjct: 420 QPKIMEMRERFKDDK-QKQQQEMMRIYREEKINPAAGCWPILIQIPVFFALYKVLYVTIE 478 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG++P LP + VG+WPI+M ++MF+QM+++P P Sbjct: 479 MRHAPFFGWIQDLAAPDPTSIFNLFGLIPLELPHLLMVGVWPILMGITMFVQMRLNPTPP 538 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D Q MI WMPVVF F L+SFPAGL+IYW+W+N++S++QQ+VIMK +G +I L D LR Sbjct: 539 DPTQQMIFTWMPVVFTFMLASFPAGLVIYWTWNNLLSVIQQSVIMKRNGTKIELWDNLRG 598 Query: 573 TFSKNYN 579 F + Sbjct: 599 MFRRKEK 605 >gi|239832645|ref|ZP_04680974.1| Inner membrane protein oxaA [Ochrobactrum intermedium LMG 3301] gi|239824912|gb|EEQ96480.1| Inner membrane protein oxaA [Ochrobactrum intermedium LMG 3301] Length = 624 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 270/607 (44%), Positives = 378/607 (62%), Gaps = 29/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT----------------VK 44 ME N N+F+ IALS++++ WQ FY+ P+ E + + + Sbjct: 15 MENNRNFFITIALSILVLTLWQVFYLGPKSEAQREQARIEEQQQQKQQATQQQAQGSQNG 74 Query: 45 QPNQVDNSYAAVL----------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 Q+ + V R A++ + R+E+ PSL GSINL GA+ DD+ L Sbjct: 75 DTPQMPAASGNVPGHSDVAAGGGTLTREAAVAQTQRIEIDTPSLRGSINLTGARLDDIFL 134 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH V +NSP + LL+PS + YF EL + +P NTVW + LT T Sbjct: 135 KNYHETVDNNSPNIELLAPSPLQQGYFVELGFTGNETTGPVPGPNTVWTVEGNNRLTQTA 194 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213 P+ L + N NI F+R IS+DE Y+F + DT+ NNS I + GR+ ++P+ A+ T Sbjct: 195 PVTLTYTNEKNITFKRIISVDESYMFSVEDTIVNNSGAPISLASYGRVTRFNQPEHASAT 254 Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KYS + IS WLGI+DKYWA+ IP ++ F Sbjct: 255 YVLHEGLIGVMGQDGLQEIKYSKIEDNKDISFKDVQGGWLGITDKYWAATLIPPQDEKFT 314 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQA F +TI PG++ T N +FAGAK I +YE+ L I +FE+ Sbjct: 315 GRFSHFTNDRPRYQADFLGAPMTIAPGQTQTVKNHVFAGAKVVSLIKNYEETLGIKQFEL 374 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 375 LIDWGWFYFITKPMFYLIDWIYKFSGNFGVAILVVTVLLKGLFFPLANKSYKSMARMKLV 434 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ Q+ M++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 435 QPKLTEIREKYADDK-MRQQQEMMKLYKEEKINPLAGCWPVLVQIPVFFALYKVLYVTIE 493 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT++F LFG+LPF +P F+ +G+WP++M ++MF+QM+M+P P Sbjct: 494 MRHAPFFGWIQDLAAPDPTSLFNLFGLLPFAVPHFLMIGVWPLLMGITMFLQMRMNPTPP 553 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMPV+F F L+SFPAGL+IYW+W+N++SI QQ +IMK G +I L D L+S Sbjct: 554 DPTQAAIFTWMPVIFTFMLASFPAGLVIYWAWNNLLSITQQGIIMKRQGVKIELFDNLKS 613 Query: 573 TFSKNYN 579 F + Sbjct: 614 LFKRKPK 620 >gi|85717142|ref|ZP_01048101.1| putative inner membrane protein translocase component YidC [Nitrobacter sp. Nb-311A] gi|85696033|gb|EAQ33932.1| putative inner membrane protein translocase component YidC [Nitrobacter sp. Nb-311A] Length = 614 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 240/606 (39%), Positives = 361/606 (59%), Gaps = 29/606 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI-----------QTVKQPNQV 49 M N N +AI LS +++ AWQ FY P++E+ ++ + Sbjct: 1 MSENRNTIIAIVLSALVLIAWQYFYNIPQMEKDRAAQQAQSELAKSQKESSEAAPNSPTP 60 Query: 50 DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 A + R A++ PRV++ P L GS++L GA+ DDL L Y V SP + Sbjct: 61 GQPAAKSAVVARDVAIASKPRVKIHTPRLSGSLSLTGARIDDLLLTKYRETVDPASPAIE 120 Query: 110 LLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L SPS T N Y+AE +V T + + +P+ +T W LT +TP+ L + N + F Sbjct: 121 LFSPSGTANPYYAEFGWVPATGSTVRVPDRDTPWQQEGSGALTESTPVTLKYDNGEGLTF 180 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 RTIS+D+ YLF I D V+N + P I RH + + + EG I LGD+ Sbjct: 181 RRTISVDDQYLFTIKDEVSNTGSAPVTLYPFALISRHGTPQVSGYYILHEGLIGYLGDQK 240 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQA 287 L E Y I+++ +F +N WLGI+DKYWA+ +P ++F G + YQ Sbjct: 241 LQEYSYKKIDEAKSVSFDVTNGWLGITDKYWAAALLPDTSARLQARFSSDQAGSVKTYQT 300 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYEKDLAIPRFEMLIDWGW 338 + + TI G + + + LFAGAKE + Y K L + F++LIDWGW Sbjct: 301 DYLEDARTIPAGGTGSLSTRLFAGAKEAGVVGLNFPLVELGGYNKQLGLNHFDLLIDWGW 360 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FYFI KPMF+ + +F+++ GNFG+AI++ TV +KL+FFPLA + Y S A MK +QP+I Sbjct: 361 FYFITKPMFLALDFFFHVFGNFGVAILVVTVLIKLVFFPLANRSYASMAKMKAVQPQITA 420 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+E++ + LQ+ M+++YK INP++GC P+LLQIPVFF++YKV+ +++EMRHAPF Sbjct: 421 LKEQYPDDRMK-LQQEMMEIYKKEKINPISGCLPMLLQIPVFFSLYKVLFVTIEMRHAPF 479 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPA 512 + WIKDL+A DPT+IF LFG+LP+ ++ +G WPIIM ++M+ QMK++P P Sbjct: 480 FAWIKDLSAPDPTHIFNLFGLLPYDPSVVPLLGPYLAIGAWPIIMGITMWFQMKLNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D Q +I +WMPV+F F L++FPAGL+IYW+W+N +S++QQ+ IM+ +G ++ L D ++S Sbjct: 540 DPTQKIIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVIQQSYIMRRNGVKVELFDNVKS 599 Query: 573 TFSKNY 578 TF + Sbjct: 600 TFRRKP 605 >gi|307301342|ref|ZP_07581104.1| YidC/Oxa1 family domain containing membrane protein insertase [Sinorhizobium meliloti BL225C] gi|307318012|ref|ZP_07597449.1| YidC/Oxa1 family domain containing membrane protein insertase [Sinorhizobium meliloti AK83] gi|38503127|sp|Q92SF5|OXAA_RHIME RecName: Full=Inner membrane protein oxaA gi|306896414|gb|EFN27163.1| YidC/Oxa1 family domain containing membrane protein insertase [Sinorhizobium meliloti AK83] gi|306903798|gb|EFN34385.1| YidC/Oxa1 family domain containing membrane protein insertase [Sinorhizobium meliloti BL225C] Length = 594 Score = 476 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 289/592 (48%), Positives = 392/592 (66%), Gaps = 14/592 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN------------NERKNIQTVKQPNQ 48 ME N NYFVAIALSV+I+ AWQ FYV P++E+ ++ Q Sbjct: 1 MENNRNYFVAIALSVLILIAWQFFYVSPKMEKDRIAAEQAQQAQQTQQQPGAQPAAPGQA 60 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 + + R QA+ S RV + P+L GSINL GA+FDDL L+GY V SP++ Sbjct: 61 LPGGAIPSAGESRDQAIGKSARVAIDTPALSGSINLTGARFDDLKLKGYRETVDPKSPVI 120 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 TL SP+ T + YF E+ Y+ + +P T W L G LTP+TP+ L + N I F Sbjct: 121 TLFSPAETADGYFTEIGYIGSDATGSVPGPQTTWTLSGGDKLTPSTPVTLSYTNDKGITF 180 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 RTIS+D+ Y+F++VD++ N + + S GR+ R T + + + EGF+ V G+ Sbjct: 181 ARTISVDDRYMFQVVDSIKNETAAPVSLSSYGRVTRFNKPTTPSIYVLHEGFVGVAGEHG 240 Query: 229 LVEQKYSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 L E YS +E +S WLGI+DKYWA+ +P + T F +F + +DG RYQ+ Sbjct: 241 LQEVGYSKVEDDEPVEPGKSTGGWLGITDKYWAATIVPPQATPFDIRFSHFADGRPRYQS 300 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + ++ +T+ PG+S+ N +FAGAKE P + +YE +IP F+ LIDWGWFYFI KPMF Sbjct: 301 DYKSDAVTVAPGQSVELKNLVFAGAKEVPVVDNYEVAYSIPNFDKLIDWGWFYFITKPMF 360 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +M +F+ L GNFGIAI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF Sbjct: 361 KMMDFFFRLFGNFGIAILITTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGD-D 419 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 LQ+AM+QLYK INPLAGCWPIL+QIPVFFA+YKVI +++EMRHAPF+GWI+DL+A Sbjct: 420 RMGLQQAMMQLYKEEKINPLAGCWPILIQIPVFFALYKVIYVTIEMRHAPFFGWIQDLSA 479 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DPT I LFG+LPF P F+H+GIWPIIM ++MF+QM+M+P P D QAM+ WMPVVF Sbjct: 480 PDPTTIINLFGLLPFEGPAFLHLGIWPIIMGVTMFLQMRMNPTPPDPTQAMLFTWMPVVF 539 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 F L+SFPAGL+IYW+W+N +SI+QQ +IMK G ++ L D L+S FSK Sbjct: 540 TFMLASFPAGLVIYWAWNNTLSILQQGIIMKRQGVKVELFDNLKSLFSKKPK 591 >gi|298290371|ref|YP_003692310.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Starkeya novella DSM 506] gi|296926882|gb|ADH87691.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Starkeya novella DSM 506] Length = 609 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 242/605 (40%), Positives = 361/605 (59%), Gaps = 27/605 (4%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEE------------------MNNERKNIQTVK 44 N N +AI LS+ ++ AWQ F P++E+ + E Sbjct: 4 ENRNMIIAIVLSMAVLIAWQYFSGIPQMEQQRQQHAAQQQAAQQQAAQPSGEAGTAAPAP 63 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + + A RA+AL+ SPR + P +IGS+ LKG + DDL+L+ Y V N Sbjct: 64 GTSAPAPAGTAPKALTRAEALARSPRAVIDTPRVIGSVALKGGRIDDLSLKDYRETVDPN 123 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 SPI+ LLSPS N ++AE +V A ++++PN+ T+W G LT P+ L + N Sbjct: 124 SPIIVLLSPSGGPNPFYAEFGWVPGAGASVQVPNAETLWTAPEGAKLTHEAPLVLSWDNG 183 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 ++F RT+S+D +Y+F +VD V N + + P G + RH + + EG I V Sbjct: 184 AGLIFRRTLSIDANYMFHVVDEVENTTAAPVALHPYGLVSRHGTPHVLGYYILHEGLIGV 243 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + L E KY DI + F WLGI+DKYWA+ IP + ++F G+ Sbjct: 244 TSEAGLHEIKYKDIAERKTETFPSVGGWLGITDKYWAATVIPGIQEKVQARFSAAQAGND 303 Query: 284 -RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQ F + +++ PG +T LFAGAKE + Y+ I RF++LIDWGWFYFI Sbjct: 304 FSYQTDFLGDAVSVAPGAKASTEGRLFAGAKEVRVVDGYQSTYNIDRFDLLIDWGWFYFI 363 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F+++ + Y VGNFG+AI++ TV +K++FFPLA K Y S A MK +QP+I LRE+ Sbjct: 364 TKPLFLVIDWIYKGVGNFGVAILIVTVMLKIVFFPLANKSYASMAKMKAVQPEITALRER 423 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + + LQ+ M+++YK INP+AGC PI++QIPVFFA+YKV+ +++EMRHAPF+GWI Sbjct: 424 YGDDRVK-LQQEMMEIYKKEKINPVAGCLPIVIQIPVFFALYKVLFVTIEMRHAPFFGWI 482 Query: 463 KDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 KDL+A DPT IF LFG++P+ F+ +G+WPIIM ++M+ QMK++P P D Q Sbjct: 483 KDLSAPDPTTIFNLFGLIPWDPGQVPVIGHFLLLGVWPIIMGITMWAQMKLNPAPPDPTQ 542 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 I +WMP++F F L SF +GL+IYW+W+N +S++QQ++IM+ +G +I L D ++ F + Sbjct: 543 KAIFDWMPLIFTFMLGSFASGLVIYWAWNNTLSVIQQSIIMRRNGVKIELWDNVKELFGR 602 Query: 577 NYNSQ 581 + Sbjct: 603 KKKPK 607 >gi|170749903|ref|YP_001756163.1| 60 kDa inner membrane insertion protein [Methylobacterium radiotolerans JCM 2831] gi|254773004|sp|B1LTW1|OXAA_METRJ RecName: Full=Inner membrane protein oxaA gi|170656425|gb|ACB25480.1| 60 kDa inner membrane insertion protein [Methylobacterium radiotolerans JCM 2831] Length = 617 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 254/612 (41%), Positives = 365/612 (59%), Gaps = 35/612 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN-ERKNIQTVKQPNQVDNSYAAVLID- 59 N FVAI LS++++ WQ F PR+E+ E +N +QP V Sbjct: 3 NDKTNMFVAIGLSLLVLLGWQYFVAGPRMEQQRQIEAQNKAAQQQPPGVTPDGVPSPSPK 62 Query: 60 --------------------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 R AL+ SPRV ++ P+L GSI LKG + DD++L+ YH Sbjct: 63 EGGPAAPAPGTLPTAQGGPVSREAALARSPRVRIETPALSGSIALKGGRVDDVSLKNYHE 122 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 + SP + L SP+ T+ Y+AE +V LP ++T+W GK L+P P+ L Sbjct: 123 TIDPKSPEIVLFSPAGTETPYYAEFGWVGANAGP-LPTNDTLWT-SDGKTLSPGMPVTLT 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N ++F+R I++D+ Y+F I D V N I P + R + + EG Sbjct: 181 WDNGAGLVFKRIIAVDDKYMFTIRDEVENKGSGAITLYPYSLVSRWGKPHTQGYYVLHEG 240 Query: 220 FIAVLGDKSLVEQKYSD---------IEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 I LG+ L E Y + + ++GI+DKYWA+ IP ++T Sbjct: 241 MIGYLGNDGLQEFTYDKLAKEGAYGGANTKGKAWTGVTGGFVGITDKYWAAAAIPDQDTP 300 Query: 271 FHSQFKYLSDG-HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + F +DG YQA + + + G S T T LFAGAKE I++YEKDL I Sbjct: 301 YTGAFTDRTDGATNVYQASVRGDAVNLAAGASATATQRLFAGAKEVNVINNYEKDLGIKH 360 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F+++IDWGWF+FI KPMF + +FY+L GNFG++I++ T +KLLF P+A + YVS A M Sbjct: 361 FDLMIDWGWFFFITKPMFRALDFFYHLFGNFGVSILVVTFCLKLLFLPIANRSYVSMAKM 420 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K +QP++ +RE++K + Q+A ++LYK INP+AGCWP+L+QIPVFFA+YKV+ I Sbjct: 421 KAVQPEMAAIRERYKDDRMK-QQQATMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFI 479 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 ++EMRHAPF+GWI+DLAA DPT+I LFG+LPF P F+H+G+WPIIM ++MF+QMKM+P Sbjct: 480 TIEMRHAPFFGWIRDLAAPDPTSIVNLFGLLPFPAPDFVHLGVWPIIMGITMFVQMKMNP 539 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D QA I +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D Sbjct: 540 APPDPVQAQIFTFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWDN 599 Query: 570 LRSTFSKNYNSQ 581 LRSTF + ++ Sbjct: 600 LRSTFRRGNGTK 611 >gi|327192535|gb|EGE59487.1| inner membrane transmembrane protein [Rhizobium etli CNPAF512] Length = 597 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 291/593 (49%), Positives = 390/593 (65%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----------------ERKNIQTVK 44 ME N NYF+AIALSV+IV WQ Y+ PRIE T Sbjct: 1 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGATPA 60 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + S AV QAL+ +PRV + P+L GSINL GA+ DDL L+GYH V + Sbjct: 61 PTSGTAPSGQAVATATLEQALAKTPRVAIDTPALSGSINLAGARLDDLKLKGYHETVDDS 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SPI+TL SP+ TK+ YF EL Y+ + +P ++T+W G LT TP+ L + N Sbjct: 121 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGASTLWTAPEGAKLTEKTPVTLSYTNDK 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F I D V N + S GR+ R+ T + + + EGFI V+ Sbjct: 181 GLTFTRTISVDERYMFTIADKVANTGQAPVSLSSYGRVTRYNKPTTPSAYVLHEGFIGVI 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD L+E KY+ +EK ++ + WLGI+DKYWA+ +P + +++ ++F + +DG R Sbjct: 241 GDDGLIESKYTAVEKEAVMPAKSTGGWLGITDKYWAATIVPPQASAYEARFSHFADGQPR 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + TI PG+SI N +FAGAKE P I YE +IPRF+ LIDWGWFYFI K Sbjct: 301 YQADYKDDAFTIAPGQSIELKNLVFAGAKEVPVIDGYEASYSIPRFDRLIDWGWFYFITK 360 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +F+ GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 361 PMFKLMDFFFRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFG 420 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWI+D Sbjct: 421 D-DRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIQD 479 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P F+H+G+WP+IM ++MF+QM+M+P P D QAMI NWMP Sbjct: 480 LSAPDPTTIVNLFGLLPFTAPTFLHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFNWMP 539 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK HG +I L D L+ F + Sbjct: 540 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRHGVKIELFDNLKGLFRRK 592 >gi|15964197|ref|NP_384550.1| putative inner membrane protein translocase component YidC [Sinorhizobium meliloti 1021] gi|15073373|emb|CAC41881.1| Putative inner-membrane transmembrane protein [Sinorhizobium meliloti 1021] Length = 595 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 289/592 (48%), Positives = 392/592 (66%), Gaps = 14/592 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN------------NERKNIQTVKQPNQ 48 ME N NYFVAIALSV+I+ AWQ FYV P++E+ ++ Q Sbjct: 2 MENNRNYFVAIALSVLILIAWQFFYVSPKMEKDRIAAEQAQQAQQTQQQPGAQPAAPGQA 61 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 + + R QA+ S RV + P+L GSINL GA+FDDL L+GY V SP++ Sbjct: 62 LPGGAIPSAGESRDQAIGKSARVAIDTPALSGSINLTGARFDDLKLKGYRETVDPKSPVI 121 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 TL SP+ T + YF E+ Y+ + +P T W L G LTP+TP+ L + N I F Sbjct: 122 TLFSPAETADGYFTEIGYIGSDATGSVPGPQTTWTLSGGDKLTPSTPVTLSYTNDKGITF 181 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 RTIS+D+ Y+F++VD++ N + + S GR+ R T + + + EGF+ V G+ Sbjct: 182 ARTISVDDRYMFQVVDSIKNETAAPVSLSSYGRVTRFNKPTTPSIYVLHEGFVGVAGEHG 241 Query: 229 LVEQKYSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 L E YS +E +S WLGI+DKYWA+ +P + T F +F + +DG RYQ+ Sbjct: 242 LQEVGYSKVEDDEPVEPGKSTGGWLGITDKYWAATIVPPQATPFDIRFSHFADGRPRYQS 301 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + ++ +T+ PG+S+ N +FAGAKE P + +YE +IP F+ LIDWGWFYFI KPMF Sbjct: 302 DYKSDAVTVAPGQSVELKNLVFAGAKEVPVVDNYEVAYSIPNFDKLIDWGWFYFITKPMF 361 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +M +F+ L GNFGIAI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF Sbjct: 362 KMMDFFFRLFGNFGIAILITTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGD-D 420 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 LQ+AM+QLYK INPLAGCWPIL+QIPVFFA+YKVI +++EMRHAPF+GWI+DL+A Sbjct: 421 RMGLQQAMMQLYKEEKINPLAGCWPILIQIPVFFALYKVIYVTIEMRHAPFFGWIQDLSA 480 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DPT I LFG+LPF P F+H+GIWPIIM ++MF+QM+M+P P D QAM+ WMPVVF Sbjct: 481 PDPTTIINLFGLLPFEGPAFLHLGIWPIIMGVTMFLQMRMNPTPPDPTQAMLFTWMPVVF 540 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 F L+SFPAGL+IYW+W+N +SI+QQ +IMK G ++ L D L+S FSK Sbjct: 541 TFMLASFPAGLVIYWAWNNTLSILQQGIIMKRQGVKVELFDNLKSLFSKKPK 592 >gi|222084728|ref|YP_002543257.1| preprotein translocase 60 kD membrane subunit [Agrobacterium radiobacter K84] gi|221722176|gb|ACM25332.1| preprotein translocase 60 kD membrane subunit [Agrobacterium radiobacter K84] Length = 600 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 285/598 (47%), Positives = 393/598 (65%), Gaps = 20/598 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN-------------------NERKNIQ 41 ME NYF+AIALSV+IV AWQ FY+ PR+E N Sbjct: 1 MENKRNYFIAIALSVLIVLAWQFFYMNPRLEAQRKAEQAAKLQQQTQQAQTTQNPAAGAT 60 Query: 42 TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 S L D++ A S + RV + P+L GSINL+GA+FDDL L+ YH V Sbjct: 61 VDGAAPSSGQSAPTTLTHDQSVAKSAASRVAIDTPALSGSINLEGARFDDLQLKAYHETV 120 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 +SPI+TL SP++TK+ YF EL YV + +P +TVW L SG LT +TP+ L + Sbjct: 121 DKSSPIITLFSPADTKDGYFTELGYVGSDATGAVPGPSTVWTLASGSKLTDSTPVTLSYT 180 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 N I F RT+S+DE Y+F I D + N+ + S GR+ R+ T + + + EGFI Sbjct: 181 NDKGITFTRTVSVDERYMFTITDKIANSGQAPVSLSSYGRVTRYNKPTTPSAYVLHEGFI 240 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 V+GD L+E KY+ EK +++ + WLGI+DKYWA+ +P + ++ + F + +DG Sbjct: 241 GVIGDDGLIETKYTAAEKEAVNPAKATGGWLGITDKYWAATIVPPQSGAYDAHFSHFADG 300 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 RYQA + + +T+ PG+S + +FAGAKE P I YE +IP+F+ LIDWGWFYF Sbjct: 301 QPRYQADYKQDAVTVAPGQSQELKSLVFAGAKEVPVIDRYETSYSIPKFDRLIDWGWFYF 360 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I KPMF LM +F+ GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ Sbjct: 361 ITKPMFKLMDFFFRYFGNFGVAILCTTIVVKGLFFPLASKQYASMANMKRMQPKMEELKA 420 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 KF LQ+A +QLYK INP+AGCWP+LLQIP+FF++YKVI I++EMRHAPF+GW Sbjct: 421 KFGD-DRMGLQQATMQLYKEEKINPIAGCWPVLLQIPIFFSLYKVIYITIEMRHAPFFGW 479 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I+DL+A DPT+I LFG+LPF P +H+G+WP+IM ++MF+QM+M+P P D QAMI N Sbjct: 480 IQDLSAPDPTSIVNLFGLLPFTAPTILHLGVWPLIMGITMFLQMRMNPTPPDPTQAMIFN 539 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 WMP+VF+F L+SFPAGL+IYW+W+N +S++QQ++IMK HG ++ L D ++ F + Sbjct: 540 WMPLVFMFMLASFPAGLVIYWAWNNTLSVIQQSIIMKRHGVKVELFDNMKGLFKRKPA 597 >gi|163757863|ref|ZP_02164952.1| putative inner membrane protein translocase component YidC [Hoeflea phototrophica DFL-43] gi|162285365|gb|EDQ35647.1| putative inner membrane protein translocase component YidC [Hoeflea phototrophica DFL-43] Length = 605 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 268/604 (44%), Positives = 379/604 (62%), Gaps = 26/604 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE------------------------EMNNE 36 ME N NYFVAI LSV+++ WQ YV P+IE Sbjct: 1 METNRNYFVAILLSVLVLIGWQYLYVSPKIEREREAAQALQAEQAATQPGATGAGTTTPG 60 Query: 37 RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 + + A R AL+ S R+ + P+L GSINL GA+ DDL L Sbjct: 61 AVSGSAPGGETAMPGVVAPETGLSREDALAQSERIAIDTPALSGSINLTGARIDDLLLSE 120 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 Y + SP + L SP+ + YFAE+ +++ A++ P +TVW+ G+ LT +P+ Sbjct: 121 YRETIDPESPNIRLFSPAQQADGYFAEVGFIADADSGPAPGPDTVWSAAPGQTLTQGSPV 180 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + N +LF R IS+D+H+LF+ DT++N+S + GR+ R + + Sbjct: 181 TLTYDNGAGLLFTRKISVDDHFLFQFEDTISNSSSQTASVAGYGRVTRFFRPQTAGIYVL 240 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSI-SNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 EG I V+G++ L E YSD+E++ I + + W+GI+DKYWA+ +P + F ++F Sbjct: 241 HEGLIGVIGEEGLQEIDYSDVEETPILAQPKATAGWMGITDKYWAAALVPPQGAGFDTRF 300 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + +DG ARYQA F + I G S+T+T +FAGAKE P I YE I F+++ID Sbjct: 301 AHFTDGRARYQADFRTDAQAIAAGGSVTSTTLVFAGAKEVPIIEGYESQFNILNFDLMID 360 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWFYFI KPMF ++ + + L+GNFG+AI+ TTV VKL+FFPLA K YVS ANMK +QPK Sbjct: 361 WGWFYFITKPMFWMIDFLFKLLGNFGLAILATTVIVKLIFFPLANKSYVSMANMKKVQPK 420 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 ++EL+ K LQ+ M++LYK INP+AGCWP+LLQIPVFFA+YKV+ +++EMRH Sbjct: 421 LEELKAKHGD-DRMALQQGMMELYKKEKINPVAGCWPVLLQIPVFFALYKVLYVTIEMRH 479 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 APF+GWI+DL+A DPT++F LFG+LP+ +PGF+ +G+WP+IM ++MF+QM+M+P P D Sbjct: 480 APFFGWIQDLSAPDPTSLFNLFGLLPYDVPGFLLIGVWPLIMGITMFLQMRMNPTPPDPT 539 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 QAMI WMPVVF F L++FPAGL+IYW+W+N +SI+QQ IMK GA+I L D L + F Sbjct: 540 QAMIFTWMPVVFTFMLATFPAGLVIYWAWNNTLSILQQGFIMKRQGAKIELWDNLMALFK 599 Query: 576 KNYN 579 Sbjct: 600 PKDK 603 >gi|188581560|ref|YP_001925005.1| 60 kDa inner membrane insertion protein [Methylobacterium populi BJ001] gi|254773003|sp|B1Z8E7|OXAA_METPB RecName: Full=Inner membrane protein oxaA gi|179345058|gb|ACB80470.1| 60 kDa inner membrane insertion protein [Methylobacterium populi BJ001] Length = 614 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 250/610 (40%), Positives = 363/610 (59%), Gaps = 34/610 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-RKNIQTVKQPNQVDNSYAAVL--- 57 N FVAIALS++++ W F P E + P D + Sbjct: 3 NDKTNMFVAIALSLVVLLGWHYFVTGPASERQRQAVQSQTAQNTAPQSADGIPSPSPREG 62 Query: 58 -----------------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 R AL+ S RV + P+L GSI LKGA+ DD++L+ YH Sbjct: 63 SPNAPVPGTVPGAAAQGPISREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHET 122 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 VS SP + LLSP+ + N Y+AE +V LPN +T+W G +L P P+ L + Sbjct: 123 VSDESPRIVLLSPAGSANPYYAEFGWVGANAGP-LPNGDTLWK-ADGDLLAPGKPLTLTW 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 N +LF+R +++D+ ++F + D V N+S + + P + R + + EG Sbjct: 181 DNGQGLLFKRIVAVDDKFMFTVRDEVENSSANPVTLYPYSLVSRWGKPQTQGYYVLHEGL 240 Query: 221 IAVLGDKSLVEQKYSDIEKSS---------ISNFHESNSWLGISDKYWASVFIPSKETSF 271 I VLG L E Y + K + + + W+GI+DKYWA+ IP ++ F Sbjct: 241 IGVLGSDGLQEYTYDKVGKEPAYGGAATQGKAWSNVTGGWVGITDKYWAAAAIPDQDKPF 300 Query: 272 HSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 F +DG + YQ + +T+ P S TT LFAGAKE I+ YE+DL I +F Sbjct: 301 TGAFTERTDGATKIYQTSVRGDAVTVAPSASSATTQRLFAGAKEVNQINAYERDLGIKQF 360 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +++IDWGWF+F+ KPMF + +FY+L+GNFG++I+L T+ +K+ F P+A + YVS A MK Sbjct: 361 DLMIDWGWFWFLTKPMFRALDFFYHLLGNFGVSILLVTLILKIFFLPIANRSYVSMAKMK 420 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QP++ +RE++K + Q+AM++LYK INP+AGCWP+L+QIPVFFA+YKV+ I+ Sbjct: 421 AVQPEMTSIRERYKDDRTK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFIT 479 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI DLAA DPT+I LFG+LPF P F+H+G+WPIIM ++MFIQMKM+P Sbjct: 480 IEMRHAPFFGWIHDLAAPDPTSIMNLFGLLPFAAPDFIHLGVWPIIMGITMFIQMKMNPA 539 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D QA + +MP+VF F L SFPAGL+IYW+W+N +S++QQ +IM+ +G ++ L D L Sbjct: 540 PPDPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYIIMRRNGVKVELWDNL 599 Query: 571 RSTFSKNYNS 580 R F + S Sbjct: 600 RGMFKRGNKS 609 >gi|126734531|ref|ZP_01750277.1| inner membrane protein oxaA, putative [Roseobacter sp. CCS2] gi|126715086|gb|EBA11951.1| inner membrane protein oxaA, putative [Roseobacter sp. CCS2] Length = 607 Score = 472 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 206/595 (34%), Positives = 326/595 (54%), Gaps = 21/595 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYP--RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 ++N N +A LS ++ AW + ++ + + P + AA Sbjct: 3 DQNKNLILATVLSFAVIVAWTTLFPPEDLPVDPATETAQTLDDPTLPAADPVNPAATTPT 62 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + + +PRV ++ GSI+L+G + DDL L Y + ++ +V LL P A Sbjct: 63 EAPEPAADAPRVAIETGEFSGSISLQGGRIDDLALTNYRETIDEDAEVVRLLKPVGEPGA 122 Query: 120 YFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 YFA + +T +P +T+W L SG LTP +P+ L + N +F I++D+ Sbjct: 123 YFASFGWTATDGIDASAVPGPDTIWALESGDTLTPNSPVTLSWDNGAGQIFRTEIAVDDA 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 ++F +V N + I P G + RH F + + + D L E Y DI Sbjct: 183 FMFTFAQSVENATSTAISARPYGLLRRHGEPDDLKNFFILHEGMVRMTDGELEETGYDDI 242 Query: 238 EKSSISNFHESN---------SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + ++ + W+G +D YW + IP + F S KY D YQA+ Sbjct: 243 TEYAVDPRERTQAERLDVSESGWIGYTDHYWMTTLIPEQGVPFRSTSKYF-DVRDLYQAE 301 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 T+ G++ T T LFAGAKE+ I +YE + + F IDWGWF+F+ KP+F Sbjct: 302 AVMPIETVAAGETATVTTRLFAGAKEWEAIRNYENEGGVGGFLDSIDWGWFFFLTKPIFA 361 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ Y +GN G +I+ TV +K++ PLA K YVS A MK +QP++++L+E+ Sbjct: 362 LLHYLNIFIGNMGWSILALTVILKIIVLPLAYKSYVSMAKMKELQPEMEKLKERTGDDK- 420 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q +Q+ M++LYK + +NP AGC PILLQIP+FF++YKVI +++E+RHAP+ GWI+DL+A Sbjct: 421 QAMQQGMMKLYKDNKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPWIGWIRDLSAP 480 Query: 469 DPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DP++ LFG+LP+ P + +GI PI++ +SM++Q K++P P D Q MI W Sbjct: 481 DPSSFINLFGLLPYAAPEPGSILALIFIGILPILLGVSMWLQQKLNPAPTDPTQQMIFAW 540 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MP VF+F L SF +GL++YW +NVI+ +QQ IM+ HGA+ + ++++ K Sbjct: 541 MPWVFMFMLGSFASGLVLYWIANNVITFIQQYAIMRSHGAKPDVFGNIKASLKKR 595 >gi|75677253|ref|YP_319674.1| putative inner membrane protein translocase component YidC [Nitrobacter winogradskyi Nb-255] gi|74422123|gb|ABA06322.1| protein translocase subunit yidC [Nitrobacter winogradskyi Nb-255] Length = 614 Score = 472 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 244/610 (40%), Positives = 367/610 (60%), Gaps = 30/610 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM------------NNERKNIQTVKQPNQ 48 M N N +AI LS +++ AWQ FY P++E+ + + + Sbjct: 1 MSENRNTIIAIVLSALVLIAWQYFYNIPQMEKDRAAHQAQSELAKSQSKSQGEAAPNTAA 60 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 S A + R A++ PRV++ P L GSI+L GA+ DDL L Y V+ SP + Sbjct: 61 PGQSAAGSAVVARDVAIASKPRVQINTPRLSGSISLTGARIDDLLLTKYRETVNPASPAI 120 Query: 109 TLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 L SPS T + Y+AE +V T + + +P+ +T+W LTP+TP+ L + N + Sbjct: 121 ELFSPSGTASPYYAEFGWVPGTGSTVRVPDRSTLWQQEGAGALTPSTPVTLKYDNGEGLT 180 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 F RT+S+D+ YLF I D VTN + P I RH + + + EG I LGD+ Sbjct: 181 FRRTVSVDDQYLFTIKDEVTNTGSAPVTLYPFALISRHGTPEISGYYILHEGLIGYLGDQ 240 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQ 286 L E Y +I+++ F+ +N WLGI+DKYWA+ +P ++F G R YQ Sbjct: 241 KLQEYSYKNIDEAGSVTFNVTNGWLGITDKYWAAALLPDTSARLQARFSSDQAGAVRTYQ 300 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKE---------FPTIHHYEKDLAIPRFEMLIDWG 337 + + TI G + + LFAGAKE + Y K L + F++LIDWG Sbjct: 301 TDYLEDARTIPAGGTGAVSTRLFAGAKEAGVVGLNFPLAELGGYNKQLGLNHFDLLIDWG 360 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WFYFI KPMF+ + +F+++ GNFG++I++ TV +KL+FFPLA + Y S A MK IQP+I+ Sbjct: 361 WFYFITKPMFLALDFFFHVFGNFGVSILVVTVLIKLVFFPLANRSYASMAKMKAIQPQIN 420 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 LRE + + LQ+ M+++YK INP++GC P+LLQIPVFF++YKV+ +++EMRHAP Sbjct: 421 ALRELYPDDRMK-LQQEMMEIYKKEKINPISGCLPVLLQIPVFFSLYKVLFVTIEMRHAP 479 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPP 511 F+ WIKDL+A DPT+IF LFG+LP+ ++ +G WPIIM ++M+ QMK++P P Sbjct: 480 FFAWIKDLSAPDPTHIFNLFGLLPYDPSVVPLIGPYLAIGAWPIIMGVTMWFQMKLNPTP 539 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D Q +I +WMPV+F F L++FPAGL+IYW+W+N +S++QQ+ IM+ +G ++ L D ++ Sbjct: 540 PDPTQKIIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVIQQSYIMRRNGVKVELFDNVK 599 Query: 572 STFSKNYNSQ 581 STF + + + Sbjct: 600 STFRRKSSDK 609 >gi|240138939|ref|YP_002963414.1| transmembrane protein, OxaA-like, preprotein translocase component [Methylobacterium extorquens AM1] gi|240008911|gb|ACS40137.1| transmembrane protein, OxaA-like, preprotein translocase component [Methylobacterium extorquens AM1] Length = 637 Score = 472 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 245/612 (40%), Positives = 363/612 (59%), Gaps = 36/612 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI--- 58 N FVAIALS++++ W F P E ++ Q + + Sbjct: 24 NDKTNMFVAIALSLVVLLGWHYFVTGPASERQRQAAQSQTAQTGAPQTADGIPSPSPREG 83 Query: 59 ------------------DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 R AL+ S RV + P+L GSI LKGA+ DD++L+ YH Sbjct: 84 SPNAPAPGTLPGAGALGPVSREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHET 143 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 VS SP + LLSP+ + N Y+AE +V LPN++T+W G +L P P+ L + Sbjct: 144 VSDESPRIVLLSPTGSANPYYAEFGWVGANAGP-LPNADTLWK-ADGDLLAPGRPLTLTW 201 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 N ++F+R +++D+ ++F + D V N S + + P + R + + EG Sbjct: 202 DNGQGLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQTQGYYVLHEGL 261 Query: 221 IAVLGDKSLVEQKYSDIEKSS---------ISNFHESNSWLGISDKYWASVFIPSKETSF 271 I VLG L E Y + K + + + W+GI+DKYWA+ IP ++ F Sbjct: 262 IGVLGGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKPF 321 Query: 272 HSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 F +DG + YQ + +T+ P S TT LFAGAKE I+ YE++ I +F Sbjct: 322 TGAFTERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNQINAYEREFGIKQF 381 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +++IDWGWF+F+ KPMF + +F++L+GNFG++I+L T+ +KL F P+A + YVS A MK Sbjct: 382 DLMIDWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKMK 441 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QP++ +RE++K + Q+AM++LYK INP+AGCWP+L+QIPVFFA+YKV+ I+ Sbjct: 442 AVQPEMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFIT 500 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV--GIWPIIMSLSMFIQMKMS 508 +EMRHAPF+GWI+DLAA DPT+I LFG+LPF P ++ + G+WPIIM ++MFIQMKM+ Sbjct: 501 IEMRHAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKMN 560 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P P D QA + +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D Sbjct: 561 PAPPDPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWD 620 Query: 569 RLRSTFSKNYNS 580 LR F + S Sbjct: 621 NLRGMFKRGNKS 632 >gi|316932100|ref|YP_004107082.1| membrane protein insertase [Rhodopseudomonas palustris DX-1] gi|315599814|gb|ADU42349.1| membrane protein insertase, YidC/Oxa1 family [Rhodopseudomonas palustris DX-1] Length = 625 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 240/615 (39%), Positives = 350/615 (56%), Gaps = 46/615 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE---------------------------- 32 M N N +A+ LS +++ WQ F P++E+ Sbjct: 1 MSDNRNTILAVVLSGLVLLGWQYFINIPQMEKQRAAQQAQQAQQQPQTTSPGTAPSGTPS 60 Query: 33 MNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 P+ + AA R AL+ +PR++++ L GSI LKGA+ DDL Sbjct: 61 ATPAPGTPSAPGAPSPANPQAAATPTVSREAALAATPRIKVETTQLSGSIALKGARIDDL 120 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILT 151 L Y V SP + L SPS + Y+AE +V A N++LP+ NTVW LT Sbjct: 121 ALTQYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGANVKLPDHNTVWTQEGSGALT 180 Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 P P+ L + N + F R I++D+ YLF + D VTN + P I RH Sbjct: 181 PANPVTLKWDNGEGLTFRRQIAVDDRYLFTVKDDVTNTGAAPVTLYPFALISRHGTPHVE 240 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + EG I LG+ L E YS I+++ F +N WLGI+DKYWAS +P Sbjct: 241 GYYILHEGLIGYLGEHGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDNTAQL 300 Query: 272 HSQFKYLSDGH-ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHY 321 ++F G+ YQ + + T+ G +++ LFAGAKE + Y Sbjct: 301 QARFSANKAGNVTTYQTDYLEDARTVPIGGTVSANARLFAGAKEARVVGINFPFAGLGGY 360 Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 ++ L + F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV +KL+F PLA K Sbjct: 361 DRQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLIKLIFLPLANK 420 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Y S A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC PILLQIPVFF Sbjct: 421 SYASMAKMKAIQPQLLALKERHPDDKVK-QQQEMMEIYRKEKINPVAGCLPILLQIPVFF 479 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPI 495 ++YKV+ +++EMRHAPF+GWI DL+AADPTN+F LFG++P+ ++ +G WP+ Sbjct: 480 SLYKVLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLIPYDPTAIPVLGHYLVLGAWPL 539 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 +M +M+ QMK++P P D Q MI WMPV+F F L+ FPAGL+IYW+W+N++S++QQA Sbjct: 540 VMGFTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNLLSVIQQAY 599 Query: 556 IMKMHGAEIGLIDRL 570 IM+ +G ++ L D L Sbjct: 600 IMRRNGVKVELFDNL 614 >gi|254561547|ref|YP_003068642.1| transmembrane protein, OxaA-like, preprotein translocase component [Methylobacterium extorquens DM4] gi|254268825|emb|CAX24786.1| transmembrane protein, OxaA-like, preprotein translocase component [Methylobacterium extorquens DM4] Length = 637 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 247/612 (40%), Positives = 363/612 (59%), Gaps = 36/612 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD----------- 50 N FVAIALS++++ W F P E ++ Q Sbjct: 24 NDKTNMFVAIALSLVVLLGWHYFVTGPASERQRQAAQSQTAQTGAPQTADGIPSPSPREG 83 Query: 51 ----------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 AA R AL+ S RV + P+L GSI LKGA+ DD++L+ YH Sbjct: 84 SPNAPAPGTLPGAAAQGPVSREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHET 143 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 VS SP + LLSP+ + N Y+AE +V LPN++T+W G +L P P+ L + Sbjct: 144 VSDESPRIVLLSPTGSANPYYAEFGWVGANAGP-LPNADTLWK-ADGDLLAPGRPLTLTW 201 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 N ++F+R +++D+ ++F + D V N S + + P + R + + EG Sbjct: 202 DNGQGLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQTQGYYVLHEGL 261 Query: 221 IAVLGDKSLVEQKYSDIEKSS---------ISNFHESNSWLGISDKYWASVFIPSKETSF 271 I VLG L E Y + K + + + W+GI+DKYWA+ IP ++ F Sbjct: 262 IGVLGGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKPF 321 Query: 272 HSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 F +DG + YQ + +T+ P S TT LFAGAKE I+ YE++ I +F Sbjct: 322 TGAFTERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNQINAYEREFGIKQF 381 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +++IDWGWF+F+ KPMF + +F++L+GNFG++I+L T+ +KL F P+A + YVS A MK Sbjct: 382 DLMIDWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKMK 441 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QP++ +RE++K + Q+AM++LYK INP+AGCWP+L+QIPVFFA+YKV+ I+ Sbjct: 442 AVQPEMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFIT 500 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV--GIWPIIMSLSMFIQMKMS 508 +EMRHAPF+GWI+DLAA DPT+I LFG+LPF P ++ + G+WPIIM ++MFIQMKM+ Sbjct: 501 IEMRHAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKMN 560 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P P D QA + +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D Sbjct: 561 PAPPDPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWD 620 Query: 569 RLRSTFSKNYNS 580 LR F + S Sbjct: 621 NLRGMFKRGNKS 632 >gi|13474029|ref|NP_105597.1| putative inner membrane protein translocase component YidC [Mesorhizobium loti MAFF303099] gi|38503148|sp|Q98D88|OXAA_RHILO RecName: Full=Inner membrane protein oxaA gi|14024781|dbj|BAB51383.1| mlr4812 [Mesorhizobium loti MAFF303099] Length = 603 Score = 471 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 273/600 (45%), Positives = 375/600 (62%), Gaps = 23/600 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN----------ERKNIQTVKQPNQVD 50 ME N N+F+ IALSV+I+ WQ FYV PR E E+K P Sbjct: 1 MENNRNFFITIALSVLILAVWQYFYVLPRSEAQREAARVEQQRVEEQKKAAEAANPGAGT 60 Query: 51 NSYAAVLIDD-----------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 + A I + R QAL+ S RV++ PSL GSINL GA+ DDL L+ Y Sbjct: 61 PAPAPGTIPNAPGGDTVTVAGRDQALAASKRVKIDTPSLEGSINLTGARLDDLKLKHYTE 120 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 V NSP + LL+P YFAE+ +V +P + TVWN+ L+P+TP+ L Sbjct: 121 TVDKNSPEIELLNPQALPTGYFAEIGFVGNDKTGAVPGAETVWNVDGNPTLSPSTPVTLT 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N + F+RT S+D +Y+F + DTV N+ + GR+ R+ +T+ + EG Sbjct: 181 YTNDKGLTFKRTFSVDANYMFTVSDTVQNSGSSAVSLFNYGRVTRYDKPAVASTYVLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 I G + L E KY+ IEK ++ WLGI+DKYWA +P+++ F ++ + Sbjct: 241 LIGFTGTEGLQEHKYASIEKDKQYQPGKATDGWLGITDKYWAVTLVPTEKQPFQPRYAFF 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 DG RYQ+ F + I + G+S T +FAGAKE I+ Y +D I RF++LIDWGW Sbjct: 301 EDGRHRYQSDFLTDAINVEAGQSATVETEVFAGAKEVAKINAYAEDRHIKRFDLLIDWGW 360 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+FI KPMF L+ Y +GNFG+AI+ TTV VK LFFPLA K Y S ANMK +QPK+ E Sbjct: 361 FHFITKPMFWLIDTLYKFLGNFGLAILATTVIVKALFFPLANKSYASMANMKKVQPKMLE 420 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+ + Q+AM++LYKT INPLAGCWP+ LQIPVFF++YKV+ I++EMRHAPF Sbjct: 421 IREKYADDKMK-QQQAMMELYKTEKINPLAGCWPVALQIPVFFSLYKVLYITIEMRHAPF 479 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI+DLAA DPT++F LFG++P LP + +G+WP+IM ++MF+QM+M+P P D QA Sbjct: 480 FGWIQDLAAPDPTSLFNLFGLIPVTLPHMLMIGVWPLIMGVTMFLQMRMNPTPPDPTQAA 539 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I WMPV+F F ++ FPAGL+IYW+W+N++SI+QQ VIMK GA+I L D L + F K Sbjct: 540 IFTWMPVIFTFMMAGFPAGLVIYWAWNNMLSILQQGVIMKRQGAKIELWDNLMALFKKKP 599 >gi|154250755|ref|YP_001411579.1| 60 kDa inner membrane insertion protein [Parvibaculum lavamentivorans DS-1] gi|154154705|gb|ABS61922.1| 60 kDa inner membrane insertion protein [Parvibaculum lavamentivorans DS-1] Length = 609 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 247/595 (41%), Positives = 356/595 (59%), Gaps = 27/595 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI-------------------- 40 M N N+ +AI LSV++ WQ F++ P++E ++ + Sbjct: 1 MGDNRNFIIAIFLSVLVFIGWQYFFIEPQMEAERARQEQLAADNGTAEPAPGAAPSAPGD 60 Query: 41 ---QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 +V P AA R +AL+ S RV + + L GS++L+GA+FDDL L Y Sbjct: 61 ARLPSVDAPATRAPGVAASGAVARDEALAQSARVPILSEELQGSVSLRGARFDDLKLLKY 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPI 156 ++ V SP V L SP T+ YF+E +++ NI LP S T W L +G LTP TP+ Sbjct: 121 NVTVDPESPEVELFSPVRTERPYFSEFGFIAAPGANINLPTSATEWELEAGDRLTPQTPV 180 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + N ++F R I+LDEH+LF + D + N S +++ P G I R ++ F + Sbjct: 181 TLRWDNGQGLVFHREIALDEHFLFTVTDRIENLSANEVTLYPYGLISRTGRPAGSSFFIL 240 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 EGFI Y D E+ ++ WLGI+DKYWA+ +P +F + F Sbjct: 241 HEGFIGEFPSVGEKAITYDDAEEDDPVQVTDTEGWLGITDKYWAAALVPQSGLNFVANFS 300 Query: 277 -YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + YQA F T+ G SIT N LFAGAK I Y D I +F +LID Sbjct: 301 EHPDPAIVNYQADFRYGAQTVPAGGSITLNNRLFAGAKVSTVIDSYR-DAGIYKFSLLID 359 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWF+F+ +PMF + + VGNFGIAI++ TV +KL+F+PLA K YV+ + MK +QP+ Sbjct: 360 WGWFWFLTQPMFDALHFIALHVGNFGIAILVITVLIKLVFYPLANKSYVAMSKMKKLQPE 419 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 +++LRE++K + Q+ +++LYK +NPLAGC P+L+QIPVFFA+YKV+ +++EMRH Sbjct: 420 MEKLRERYKDDKLK-QQQEIMELYKKEKVNPLAGCLPVLIQIPVFFALYKVLFVTIEMRH 478 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 APF+GWI DL+A DPT+IF LFG++P+ P + +GIWP+IM +MF+Q +M+P PAD Sbjct: 479 APFFGWINDLSAPDPTSIFNLFGLIPWDPPSMLMIGIWPLIMGFTMFVQQRMNPLPADPI 538 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 QA I WMPV+F F L+SFPAGL+IYW+W+N +S++QQ VIMK G +I + L Sbjct: 539 QAQIFTWMPVIFTFMLASFPAGLVIYWAWNNTLSVIQQGVIMKRQGVKIEIFSNL 593 >gi|260577136|ref|ZP_05845113.1| 60 kDa inner membrane insertion protein [Rhodobacter sp. SW2] gi|259020610|gb|EEW23929.1| 60 kDa inner membrane insertion protein [Rhodobacter sp. SW2] Length = 646 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 216/598 (36%), Positives = 333/598 (55%), Gaps = 21/598 (3%) Query: 1 ME-RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ +N N +A ALS +++ W + P N I + Sbjct: 1 MDGQNKNLILATALSFLVILVWFVLFPPPEPVVDPNAPA-ISATEALTPPVADQTTAATT 59 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + A A+ +PR+ + P L GSI++ G + DDL+L+GY + S IV LLSP +A Sbjct: 60 EPAAAVPETPRLTIDTPLLQGSISMLGGRIDDLSLKGYKESLDPASDIVRLLSPVGKDSA 119 Query: 120 YFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y+A + + N ++P +NT W L +G L P P+ L + N + F RTI++D+H Sbjct: 120 YYALYGWAPGGDLANEDVPGANTEWKLAAGTSLAPGQPVTLAWDNGKGLNFTRTIAIDDH 179 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+F + V N + ++R +P G + RH F V + D L E KY D+ Sbjct: 180 YMFTVTQGVENTTGAEVRLAPYGIVARHGKPAGLQNFYVLHEGVVGRTDGKLEEVKYKDL 239 Query: 238 EKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + ++ W+G +DKYW + IP++ F S KY+ YQ + Sbjct: 240 VDLPVVEREGAQAEVVEATTDGWIGFTDKYWMTTLIPAQGKPFTSVTKYV-ASADIYQVE 298 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + + PG TT+ LFAGAKE+ TI Y+ D +P F IDWGWF+F+ KPMF Sbjct: 299 TREPVLVVAPGAKAETTSRLFAGAKEWATIRGYQNDAGVPGFIDSIDWGWFFFLTKPMFW 358 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ L+GN G+AI+ T+ +K++ FPLA K YVS A MK +QP+I+ ++E+ Sbjct: 359 VLHNLNALIGNMGLAIIGLTLVLKVIVFPLAYKSYVSMARMKELQPEIEAMKERVGDDK- 417 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q +Q M++LYK +NP AGC P+L+QIP+FF++YKVI ++LE+RHAPF+GW+ DL+A Sbjct: 418 QKVQVEMMKLYKEKKVNPAAGCLPVLIQIPIFFSLYKVIFVTLELRHAPFFGWLTDLSAR 477 Query: 469 DPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 D +++F FG+ P+ P + +G+ PI++ +SM++Q K++P PAD Q MI W Sbjct: 478 DSSSLFNFFGLAPWAAPEHGTLLATIFIGLLPILLGISMWLQQKLNPAPADPTQQMIFAW 537 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 MP VF+F L SF +GL++YW +NVI+ QQ +IM+ HG + ++S F K + Sbjct: 538 MPWVFMFMLGSFASGLVLYWITNNVITFTQQYIIMRSHGHHPDIFGNIKSGFKKKPAA 595 >gi|163795447|ref|ZP_02189414.1| 60 kDa inner membrane insertion protein [alpha proteobacterium BAL199] gi|159179433|gb|EDP63964.1| 60 kDa inner membrane insertion protein [alpha proteobacterium BAL199] Length = 584 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 220/582 (37%), Positives = 330/582 (56%), Gaps = 21/582 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE------------------EMNNERKNIQT 42 M N +AI LSV+I+ +Q P+I+ Sbjct: 1 MTDQKNMILAIVLSVLILLGFQFLVERPKIDQQRQQQAQQQGQTSQADGSSVPVPGQSTA 60 Query: 43 VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 P +S + R AL++SPR+ + P + GSI LKGA+ DD+ L Y + + Sbjct: 61 PSAPGAARDSAGQTAGESREAALALSPRITISTPRVQGSIALKGARIDDVVLTDYRVTID 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 SP + LL P+ K+ Y+AE +V+ + + + LTP P+ L + N Sbjct: 121 PKSPPIHLLDPTGLKHPYYAEFGWVAASGSSVAVPTPETIWTTDSTTLTPERPVTLSWSN 180 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 FERTI++D+ Y+F + V N S D I P G I R + + + EG + Sbjct: 181 GQGQTFERTIAIDKDYMFTVSQRVVNKSTDAITLYPYGLISRGGTPETLDFYILHEGPLG 240 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDG 281 V D +L E YSD+ + + W+GI+DKYW + +P + +++ F++ + Sbjct: 241 VFND-TLTEINYSDLREDGDVQRAATGGWIGITDKYWLAALVPGQGQTWNYNFRHSVRNQ 299 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 RYQ F +I G++ +T N LFAGAK + YE+ + F++ ID+GWFYF Sbjct: 300 SDRYQVDFLGEATSIAAGETASTENRLFAGAKLVKVLDRYEEQYGVANFDLAIDFGWFYF 359 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP F ++++ + L+GNFG+AI+ T+ VKLLFFPLA K Y S A MK + PK+ E+RE Sbjct: 360 LTKPFFYVLTWLHALLGNFGLAILGLTICVKLLFFPLANKSYASMAKMKALTPKLQEMRE 419 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K Q L M+ LYK +NP AGC PI++QIPVFFA+YK + +++EMRHAPF+GW Sbjct: 420 KHGD-DRQRLNDEMMALYKREKVNPAAGCLPIVIQIPVFFALYKTLFVNIEMRHAPFYGW 478 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 IKDL+A DPT IF L G++P+ P F+ +GIWP++M ++MF+Q K++P PAD QA I Sbjct: 479 IKDLSAPDPTTIFNLLGVIPWDPPQFLMIGIWPVLMGITMFLQQKLNPAPADPVQAKIFM 538 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P++F F L F AGL+IYW+W+N++SI QQ +IM+ G + Sbjct: 539 FLPLMFTFLLGHFAAGLVIYWTWNNLLSITQQWIIMRRMGIK 580 >gi|182680230|ref|YP_001834376.1| 60 kDa inner membrane insertion protein [Beijerinckia indica subsp. indica ATCC 9039] gi|254772748|sp|B2IDV5|OXAA_BEII9 RecName: Full=Inner membrane protein oxaA gi|182636113|gb|ACB96887.1| 60 kDa inner membrane insertion protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 604 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 242/600 (40%), Positives = 357/600 (59%), Gaps = 25/600 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA------- 54 + + N ++AI LS++++ W F+ P++E+ + + Q ++ A Sbjct: 3 QDSRNLYLAIGLSLLVLIGWNYFFAGPQVEKARQAQIVREQQAQTQTTSDTTARSDLNVP 62 Query: 55 ---------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 R +AL+ SPRV+L P+L GSINL+GA+ DD++L+ Y V+ +S Sbjct: 63 GQRSLPGESPQTQLSRPEALAASPRVKLDTPNLFGSINLRGARIDDVSLKAYRETVAKDS 122 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 P + LLSPS T Y+A+ +V+ A L + ++LTP P+ L + N Sbjct: 123 PNIVLLSPSGTPAPYYADAGFVAPAEAGLLLPKSDTLWSADREVLTPEAPVTLTYDNGQG 182 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 ++F RTIS+D+ ++F + D V N + + P + RH + EG + V+G Sbjct: 183 LIFHRTISVDDRFMFTLTDKVENKTDKPVTLYPYSLVSRHGRPVTAGYAVLHEGMVGVIG 242 Query: 226 DKSLVEQKYSDIEKSSI--SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 D L E Y I K +F + WLG +DKYWA+V P + T F +F Sbjct: 243 DNGLQEITYDKIHKEENATKSFKGTGGWLGFTDKYWAAVIAPDQATPFEGRFSERGTTTP 302 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 YQ +TI PG + + LFAGAKE T+ Y +L I +F++LIDWG+FYFI Sbjct: 303 LYQTDALGPALTIAPGGTGGDMSRLFAGAKETQTLDDYRNELGIKKFDLLIDWGYFYFIT 362 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +PMF ++ Y +VGNFG+AI+ TV VK +FFPLA + Y+S A MK IQP++ LRE++ Sbjct: 363 RPMFWILHTIYQVVGNFGVAILCITVLVKAVFFPLANRSYLSMAKMKAIQPQMLALRERY 422 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 + Q+ +++LYK INP+AGC P+L+QIPVFFA+YKV+ +++EMR APF+GWI+ Sbjct: 423 ADDKVK-QQQELMELYKREKINPVAGCLPMLIQIPVFFALYKVLFVTIEMRQAPFFGWIR 481 Query: 464 DLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+A DPTNIF LFG+LPF F+ +GIWP+IM +SMF QMKM+P PAD Q Sbjct: 482 DLSAPDPTNIFNLFGLLPFDPTHLPMIGHFLAIGIWPLIMGVSMFFQMKMNPEPADPVQK 541 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 + +WMPV+F F L +FP+GL+IYW+W+N +S++QQ++IMK G ++ L D L STF K Sbjct: 542 QMFSWMPVIFTFMLGTFPSGLVIYWTWNNTLSVLQQSLIMKRAGVKVELWDNLMSTFRKK 601 >gi|227820669|ref|YP_002824639.1| putative inner membrane protein translocase component YidC [Sinorhizobium fredii NGR234] gi|254773017|sp|C3MF49|OXAA_RHISN RecName: Full=Inner membrane protein oxaA gi|227339668|gb|ACP23886.1| putative inner membrane protein translocase component YidC [Sinorhizobium fredii NGR234] Length = 592 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 286/589 (48%), Positives = 387/589 (65%), Gaps = 11/589 (1%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 ME N NYFVAIALSV+I+ AWQ FYV PR+++ + Q +Q Sbjct: 2 MENNRNYFVAIALSVLILVAWQYFYVNPRMDKDRIAAEKAQQTQQVQPQQGGQQPAPGQA 61 Query: 52 -SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 AV + R QA++ S RV + P+L GSINL GA+FDDL L+GYH V SP++TL Sbjct: 62 LPGGAVPGESRDQAVAKSARVAIDTPALSGSINLTGARFDDLKLKGYHETVDPKSPVITL 121 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 SP+ T + YF E+ Y+ + +P TVW L G+ LTP TP+ L + N I F R Sbjct: 122 FSPAETADGYFTEIGYIGNDASGSVPGPQTVWTLSGGEKLTPATPVTLTYTNDKGITFAR 181 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 TIS+DE+Y+F++VD++ N+ + S GR+ R T + + + EGFI V G Sbjct: 182 TISIDENYMFQVVDSIKNDGSAPVSLSSYGRVTRFNKPTTPSIYVLHEGFIGVAGGSLQE 241 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 E + + W GI+DKYWA+ +P +ET F +F + +DG R+Q+ + Sbjct: 242 VGYSKIEENLPVEPGKTTGGWHGITDKYWAAAIVPPQETPFDIRFSHFTDGRPRFQSDYK 301 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + +T+ PG+S N +FAGAKE + Y AIP+FE LIDWGWF+FI +PMF +M Sbjct: 302 GDAVTVAPGQSAEVKNLVFAGAKEVQVVDTYTTAYAIPKFEKLIDWGWFWFITQPMFKMM 361 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 +F+ L GNFG+AI++TT+ VKL+FFPLA KQY S ANMK +QPK++EL++KF Sbjct: 362 DFFFRLFGNFGVAILVTTIVVKLIFFPLANKQYASMANMKKVQPKMEELKKKFGD-DRMG 420 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 LQ+AM+QLYK INPLAGCWPIL+QIPVFFA+YKVI I++EMRHAPF+GWI+DL+A DP Sbjct: 421 LQQAMMQLYKDEKINPLAGCWPILIQIPVFFALYKVIYITIEMRHAPFFGWIRDLSAPDP 480 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 T I LFG+LPF P F+H+GIWPIIM ++MF+QM+M+P P D QAM+ WMP+VF F Sbjct: 481 TTIVNLFGLLPFDGPAFLHLGIWPIIMGVTMFLQMRMNPTPPDPTQAMLFTWMPLVFTFM 540 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 L+SFPAGL+IYW+W+N +SI QQ++IMK G +I L D L+ F+K Sbjct: 541 LASFPAGLVIYWAWNNTLSITQQSIIMKRQGVKIELFDNLKGLFTKRPK 589 >gi|163851774|ref|YP_001639817.1| 60 kDa inner membrane insertion protein [Methylobacterium extorquens PA1] gi|254773001|sp|A9W590|OXAA_METEP RecName: Full=Inner membrane protein oxaA gi|163663379|gb|ABY30746.1| 60 kDa inner membrane insertion protein [Methylobacterium extorquens PA1] Length = 616 Score = 468 bits (1204), Expect = e-129, Method: Composition-based stats. Identities = 248/612 (40%), Positives = 363/612 (59%), Gaps = 36/612 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD----------- 50 N FVAIALS++++ W F P E ++ Q Sbjct: 3 NDKTNMFVAIALSLVVLLGWHYFVTGPASERQRQAAQSQTAQTGAPQTADGIPSPSPREG 62 Query: 51 ----------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 AA R AL+ S RV + P+L GSI LKGA+ DD++L+ YH Sbjct: 63 GPNAPAPGTLPGAAAQGPVSREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHET 122 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 VS SP + LLSP+ T N Y+AE +V LPN++T+W G +L P P+ L + Sbjct: 123 VSDESPRIVLLSPTGTANPYYAEFGWVGANAGP-LPNADTLWK-ADGDLLAPGRPLTLTW 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 N ++F+R +++D+ ++F + D V N S + + P + R + + EG Sbjct: 181 DNGQGLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQTQGYYVLHEGL 240 Query: 221 IAVLGDKSLVEQKYSDIEKSS---------ISNFHESNSWLGISDKYWASVFIPSKETSF 271 I VLG L E Y + K + + + W+GI+DKYWA+ IP ++ F Sbjct: 241 IGVLGGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKPF 300 Query: 272 HSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 F +DG + YQ + +T+ P S TT LFAGAKE I+ YE++ I +F Sbjct: 301 TGAFTERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNQINAYEREFGIKQF 360 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +++IDWGWF+F+ KPMF + +F++L+GNFG++I+L T+ +KL F P+A + YVS A MK Sbjct: 361 DLMIDWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKMK 420 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QP++ +RE++K + Q+AM++LYK INP+AGCWP+L+QIPVFFA+YKV+ I+ Sbjct: 421 AVQPEMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFIT 479 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV--GIWPIIMSLSMFIQMKMS 508 +EMRHAPF+GWI+DLAA DPT+I LFG+LPF P ++ + G+WPIIM ++MFIQMKM+ Sbjct: 480 IEMRHAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKMN 539 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P P D QA + +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L D Sbjct: 540 PAPPDPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELWD 599 Query: 569 RLRSTFSKNYNS 580 LR F + S Sbjct: 600 NLRGMFKRGNKS 611 >gi|84685375|ref|ZP_01013273.1| putative inner membrane protein translocase component YidC [Maritimibacter alkaliphilus HTCC2654] gi|84666532|gb|EAQ13004.1| putative inner membrane protein translocase component YidC [Rhodobacterales bacterium HTCC2654] Length = 613 Score = 468 bits (1204), Expect = e-129, Method: Composition-based stats. Identities = 217/613 (35%), Positives = 333/613 (54%), Gaps = 34/613 (5%) Query: 1 ME-RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 ME +N N +A LS +++ AW + E + E + Sbjct: 1 MENQNRNLLIATVLSFVVITAWMLLFPPAEPEAVQPEEVAETLAPGATDGAATPPNAAEQ 60 Query: 60 DRAQA--------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A L SPR+ ++ P L GSI+L G + DDL+L Y + + S Sbjct: 61 TGTDAAPEATPDTTTTAQTLENSPRIPVETPKLSGSISLIGGRIDDLHLSDYRVSLDKGS 120 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 VTLL PS + AY+ + N N ++P + T W L G LTP TPI L + N Sbjct: 121 DTVTLLRPSGSDEAYYTLYGWAPGGNLGNADVPGAMTQWELEEGDTLTPETPITLAWTND 180 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 ++F RTIS+DE YLF + +V N S R +P G I RH + F + + Sbjct: 181 AGMIFRRTISVDEDYLFTVRQSVENGSDIAQRLAPYGLIARHGEPSNLKGFFILHEGVIR 240 Query: 224 LGDKSLVEQKYSDIEKSSISNF---------HESNSWLGISDKYWASVFIPSKETSFHSQ 274 D L E Y D + N W+G +D YW ++ +P + + Sbjct: 241 QDDTELSEIDYKDARELDRDPREGAPAEATAITENGWVGFTDHYWETILVPESGQPYTAV 300 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 KY+ +G YQ + I + PG + + LFAGAKE+ TI Y+ D I RF I Sbjct: 301 VKYV-EGADIYQTEVRLPTIEVAPGATAEVSTRLFAGAKEWDTIRDYQNDEGIYRFLDSI 359 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 DWG F+F+ KP+F ++ + ++ +GN G +I+ T +K++ FPLA + YVS A MK +QP Sbjct: 360 DWGMFFFLTKPIFAVLHWLHSFIGNMGWSIIALTFVIKMVLFPLAYRSYVSMAKMKELQP 419 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 ++++LRE+ ++ Q+ M++LYK + +NP +GC PILLQIP++F++YKVI ++LE+R Sbjct: 420 EMEKLREQAGDDRMKM-QQGMMELYKKNKVNPASGCLPILLQIPIWFSLYKVIFVTLELR 478 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMS 508 H P++GWI+DL+A DP++I LFG+LP P F +G+ PI++ +SM++Q K++ Sbjct: 479 HEPWFGWIRDLSAPDPSSILNLFGLLPNAAPDPTSWFYFFSLGVLPILLGISMWLQQKLN 538 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P PAD QA I+NWMP VF+F L F +GL+IYW +N ++ +QQ IM+ HGA+ + Sbjct: 539 PAPADATQATIMNWMPWVFMFMLGRFASGLVIYWIANNTLTFIQQYTIMRSHGAKPDIFG 598 Query: 569 RLRSTFSKNYNSQ 581 ++S+F K ++ Sbjct: 599 NIKSSFKKKPATE 611 >gi|225686778|ref|YP_002734750.1| putative inner membrane protein translocase component YidC [Brucella melitensis ATCC 23457] gi|256262088|ref|ZP_05464620.1| inner membrane protein [Brucella melitensis bv. 2 str. 63/9] gi|225642883|gb|ACO02796.1| Inner membrane protein oxaA [Brucella melitensis ATCC 23457] gi|263091777|gb|EEZ16108.1| inner membrane protein [Brucella melitensis bv. 2 str. 63/9] gi|326411186|gb|ADZ68250.1| putative inner membrane protein translocase component YidC [Brucella melitensis M28] gi|326554477|gb|ADZ89116.1| putative inner membrane protein translocase component YidC [Brucella melitensis M5-90] Length = 610 Score = 468 bits (1204), Expect = e-129, Method: Composition-based stats. Identities = 267/607 (43%), Positives = 379/607 (62%), Gaps = 29/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41 ME N+F+ IALS++I+ WQ FY+ P+ E + + + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 42 -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 ++ AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ + IS W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKRERINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYN 579 F + Sbjct: 600 LFRRKPK 606 >gi|254473802|ref|ZP_05087197.1| 60 kDa inner membrane insertion protein [Pseudovibrio sp. JE062] gi|211957188|gb|EEA92393.1| 60 kDa inner membrane insertion protein [Pseudovibrio sp. JE062] Length = 603 Score = 468 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 258/603 (42%), Positives = 371/603 (61%), Gaps = 24/603 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRI--------------------EEMNNERKNI 40 M N N VAI LS++++ WQ F P++ + Sbjct: 1 MNDNRNMIVAIVLSLVVLLGWQYFIAGPQLEAQQEAQQAQLANDAQQAGSSSPVALPEGA 60 Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 ++ AA R QAL+ SPR+ + PSL GS+NLKGA+ DDL L+GY Sbjct: 61 SGQVTAPGTESGTAAQSFVSREQALAASPRLTIDTPSLSGSVNLKGAKLDDLRLKGYRQT 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLV 159 ++ +S V L SP + Y+AE +V+ I+LPN+ TVW + LTP++PI L Sbjct: 121 IAKDSETVVLFSPKGSPAPYYAEHGWVADPGVQIKLPNAETVWTAETSGNLTPSSPIVLN 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N ++F+RT S+DE+Y+F + V NNS ++ P G I R+ F + EG Sbjct: 181 WDNGEGLVFKRTFSVDENYMFTVDQEVQNNSGQNVQLYPYGLIARNGEPETAGFFVLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 I V+GD+ L E YSD+ + WLG +DKYWA+ IP+ T F F Y Sbjct: 241 LIGVIGDEGLQEINYSDLIDDGSIRPGRANMGWLGFTDKYWAATLIPTPGTEFQPNFSY- 299 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + +Q+ + + ++ G IT ++ L+AGAK I Y+ I F+++IDWGW Sbjct: 300 NARTQNFQSDYLGSATQVVDGAKITNSSLLYAGAKITSLIDGYQNSYDILNFDLMIDWGW 359 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FYF+ KPMF + + Y+LVGNFGIAI+L TV VK +FFPLA K YVS + MK +QPK+ E Sbjct: 360 FYFLTKPMFWTIDWLYSLVGNFGIAILLVTVIVKAIFFPLANKSYVSMSRMKLVQPKMTE 419 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+K Q Q+AM++LYKT INPLAGC P+L+QIPVFF++YKV+ +++EMRHAPF Sbjct: 420 IREKYKDDK-QKQQQAMMELYKTEKINPLAGCLPMLIQIPVFFSLYKVLFVTIEMRHAPF 478 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI+DL+A DPT IF LFG++P+ P F+ +G+WP+IM ++MF+QMKM+P PA+ Q M Sbjct: 479 FGWIQDLSAPDPTTIFNLFGLIPWDPPTFLMIGVWPLIMGITMFLQMKMNPAPAEPAQQM 538 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I NWMPV+F F L++FPAGL+IYW+W+N +S++QQ VIM+ G ++ L D L++TF + Sbjct: 539 IFNWMPVIFTFMLATFPAGLVIYWAWNNTLSVLQQGVIMRRQGVKLELFDNLKATFKRKP 598 Query: 579 NSQ 581 + Sbjct: 599 KEE 601 >gi|146337896|ref|YP_001202944.1| putative inner membrane protein translocase component YidC [Bradyrhizobium sp. ORS278] gi|146190702|emb|CAL74706.1| Inner membrane protein oxaA [Bradyrhizobium sp. ORS278] Length = 622 Score = 468 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 254/623 (40%), Positives = 365/623 (58%), Gaps = 45/623 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK------------NIQTVKQPNQ 48 M N N +A+ LS +++ WQ FY P++E+ + + P+ Sbjct: 1 MTDNRNTILAVILSGLVLILWQVFYNGPQMEKQRAQAQLQSELAKKQGPATQPDGTAPSA 60 Query: 49 VDNSYAAVL---------------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 AA + R A++ +PRV++ P L GSI+LKGA+ DDL Sbjct: 61 TPQPNAAASGSPSAPGGAATTATGVVPRETAIAANPRVKIDTPRLSGSISLKGARIDDLA 120 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTP 152 Y V NSP + L SPSNT Y+AE +V+ A +++P+ NTVW LTP Sbjct: 121 FVQYRETVDPNSPAIVLFSPSNTAEPYYAEFGWVNAAGAKVQVPDQNTVWQQDGANALTP 180 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212 TP+KL + N + + F+RTIS+D+HYLF I D VTN + P G I RH + Sbjct: 181 ATPVKLTYTNGDGLTFQRTISVDDHYLFTIKDDVTNAGSAPVTLYPYGLISRHGTPHVSG 240 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + EG I LG+K L E Y ++ + F +N WLGI+DKYWA+ +P + Sbjct: 241 YYILHEGLIGYLGEKGLQEFTYKKMDDEKAAKFDITNGWLGITDKYWAAALLPMTDARLQ 300 Query: 273 SQFKYL-SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYE 322 + + D RYQ + N T+ G S T + LFAGAKE + Y Sbjct: 301 ANYSSKLVDNQHRYQTDYVENPQTVPAGGSATVSTRLFAGAKEAGVVGINFPLGGLGGYN 360 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 + L + F++LIDWGWFYF+ KPMF+ + +F+ GNFG++I+L TV VKL F PLA K Sbjct: 361 QQLGLNHFDLLIDWGWFYFLTKPMFLALDFFFRFFGNFGVSILLVTVLVKLAFLPLANKS 420 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y S A MK IQP++ L+E++ + Q+ M+++YK INP+AGC P++LQIPVFF+ Sbjct: 421 YASMAKMKAIQPQLQALKERYPDDRMK-QQQEMMEIYKKEKINPVAGCLPVVLQIPVFFS 479 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPII 496 +YKV+ +++EMRHAPF GWIKDL+A DPTN+FTLFG++PF ++ +GIWPII Sbjct: 480 LYKVLFVTIEMRHAPFIGWIKDLSAPDPTNLFTLFGLIPFDPTQLPLFGHYLALGIWPII 539 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M ++M+ QMK++P P D QAMI NWMP++F F L+ FPAGL+IYW+W+N +S++QQ+ I Sbjct: 540 MGITMWFQMKLNPAPPDPTQAMIFNWMPLIFTFMLAGFPAGLVIYWAWNNTLSVLQQSFI 599 Query: 557 MKMHGAEIGLIDRLRSTFSKNYN 579 M+ +G ++ L D +R TF K Sbjct: 600 MRRNGVKVELFDNIRGTFRKKPA 622 >gi|190890108|ref|YP_001976650.1| inner membrane transmembrane protein [Rhizobium etli CIAT 652] gi|254773016|sp|B3Q040|OXAA_RHIE6 RecName: Full=Inner membrane protein oxaA gi|190695387|gb|ACE89472.1| inner membrane transmembrane protein [Rhizobium etli CIAT 652] Length = 598 Score = 468 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 290/593 (48%), Positives = 394/593 (66%), Gaps = 17/593 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP-------------- 46 ME N NYF+AIALSV+IV WQ Y+ PRIE ++ + +Q Sbjct: 2 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGATPA 61 Query: 47 --NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + S AV QAL+ +PRV + P+L GSINL GA+ DDL L+GYH V + Sbjct: 62 PASGTAPSGQAVATATLEQALAKTPRVAIDTPALSGSINLAGARLDDLKLKGYHETVDDS 121 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SPI+TL SP+ TK+ YF EL Y+ + +P ++T+W G LT TP+ L + N Sbjct: 122 SPIITLFSPAETKDGYFTELGYIGSDATGSVPGASTLWTAPEGAKLTEKTPVTLSYTNDK 181 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F I D V N + S GR+ R+ T + + + EGFI V+ Sbjct: 182 GLTFTRTISVDERYMFTIADKVANTGQAPVSLSSYGRVTRYNKPTTPSAYVLHEGFIGVI 241 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD L+E KY+ +EK ++ + WLGI+DKYWA+ +P + +++ ++F + SDG R Sbjct: 242 GDDGLIESKYTAVEKEAVMPAKSTGGWLGITDKYWAATIVPPQASAYEARFSHFSDGQPR 301 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQA + + T+ PG+S+ N +FAGAKE P I YE +IPRF+ LIDWGWFYFI K Sbjct: 302 YQADYKDDAFTVAPGQSVELKNLVFAGAKEVPVIDGYEASYSIPRFDRLIDWGWFYFITK 361 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 PMF LM +F+ GNFG+AI+ TT+ VK LFFPLA KQY S ANMK +QPK++EL+ KF Sbjct: 362 PMFKLMDFFFRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFG 421 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI I++EMRHAPF+GWI+D Sbjct: 422 D-DRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIQD 480 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DPT I LFG+LPF P F+H+G+WP+IM ++MF+QM+M+P P D QAMI NWMP Sbjct: 481 LSAPDPTTIVNLFGLLPFTAPTFLHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFNWMP 540 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +VF+F L+SFPAGL+IYW+W+N +S++QQ+VIMK HG +I L D L+ F + Sbjct: 541 LVFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRHGVKIELFDNLKGLFRRK 593 >gi|254712779|ref|ZP_05174590.1| putative inner membrane protein translocase component YidC [Brucella ceti M644/93/1] gi|254715848|ref|ZP_05177659.1| putative inner membrane protein translocase component YidC [Brucella ceti M13/05/1] gi|261217609|ref|ZP_05931890.1| inner membrane protein oxaA [Brucella ceti M13/05/1] gi|261320486|ref|ZP_05959683.1| inner membrane protein oxaA [Brucella ceti M644/93/1] gi|260922698|gb|EEX89266.1| inner membrane protein oxaA [Brucella ceti M13/05/1] gi|261293176|gb|EEX96672.1| inner membrane protein oxaA [Brucella ceti M644/93/1] Length = 609 Score = 468 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 267/606 (44%), Positives = 379/606 (62%), Gaps = 28/606 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41 ME N+F+ IALS++I+ WQ FY+ P+ E + + + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSTGD 60 Query: 42 ------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 ++ AA R A++ SPR+E+ PSL GSINL GA+ DDL L+ Sbjct: 61 TPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYLK 120 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+TP Sbjct: 121 KYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPSTP 180 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNTF 214 + L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ ++P+ A+ T+ Sbjct: 181 VTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASATY 240 Query: 215 GVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + EG I V+G L E KY+ + IS W+GI+DKYWA+ IP ++ F Sbjct: 241 VLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFTG 300 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++L Sbjct: 301 RFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDLL 360 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 IDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK +Q Sbjct: 361 IDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLMQ 420 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++EM Sbjct: 421 PKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIEM 479 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 RHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P D Sbjct: 480 RHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPPD 539 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 PTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKGL 599 Query: 574 FSKNYN 579 F + Sbjct: 600 FRRKPK 605 >gi|154245865|ref|YP_001416823.1| putative inner membrane protein translocase component YidC [Xanthobacter autotrophicus Py2] gi|154159950|gb|ABS67166.1| 60 kDa inner membrane insertion protein [Xanthobacter autotrophicus Py2] Length = 616 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 238/617 (38%), Positives = 348/617 (56%), Gaps = 38/617 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM---------------------NNERKN 39 M N N F+AI LS+ I+ WQ F+ P+ E Sbjct: 1 MSDNRNMFIAIGLSLAILIGWQFFFGIPQAERQRQAAEQQRIAQQAQQPAPGATPGATPG 60 Query: 40 IQTVKQPNQVDNSYAAVLIDD--------RAQALSMSPRVELKNPSLIGSINLKGAQFDD 91 P S R +AL+++PR ++ L GSI LKG + DD Sbjct: 61 TTAGAAPGATPGSAGVPQAGSPVPARPLTREEALALTPRAAIETQRLKGSIALKGGRVDD 120 Query: 92 LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151 L L YH V SP + LLSPS N ++AE + + A + + LT Sbjct: 121 LLLTEYHETVDPKSPNIVLLSPSGAPNPFYAEFGWTAAAGTG-VKVPGPDTVWTTSGTLT 179 Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 TP+ L + N ++F RT ++D+HY+F + D V N + + P + RH Sbjct: 180 EKTPLTLSWDNGAGLIFHRTYTIDDHYMFAVKDEVENKTGAAVTLYPYALVSRHGIPHVA 239 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + EG I VLGD L E Y+ ++K F + WLGI+DKYWA+ IP + Sbjct: 240 GFYILHEGLIGVLGDSGLQEITYAKMDKEKPHTFAATGGWLGITDKYWAATVIPDQSVKV 299 Query: 272 HSQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 ++F + G +QA + A +T+ PG ++ LFAGAK + Y+ I RF Sbjct: 300 DAKFSTSTFAGTQTFQADYLAAPLTVEPGATVAAKGQLFAGAKVVQVVDGYKTKYGIDRF 359 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++LIDWGWFYFI KP+F+ + + Y LVGNFG+AI++ TV +K LFFPLA K Y S A MK Sbjct: 360 DLLIDWGWFYFITKPLFLAIDWLYRLVGNFGVAILIITVALKGLFFPLANKSYASMAKMK 419 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QP++ +RE++ + Q+A+++LYK INP+AGC PI++QIPVFFA+YKV+ ++ Sbjct: 420 AVQPEVTAIRERYADDKVK-QQQALMELYKKEKINPVAGCLPIVIQIPVFFALYKVLFVT 478 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQ 504 +EMRHAPF+GWI+DL+A DPT IF LFG++P+ ++ +G WPIIM ++M++Q Sbjct: 479 IEMRHAPFFGWIRDLSAPDPTTIFNLFGLIPWDPSSVPVLGGYLMLGAWPIIMGITMWVQ 538 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 MK++P P D Q MI NWMP++F F L+ F AGL+IYW+W+N +S+ QQA+IMK +G +I Sbjct: 539 MKLNPAPPDPTQQMIFNWMPIIFTFMLAHFAAGLVIYWAWNNTLSVSQQAMIMKRNGVKI 598 Query: 565 GLIDRLRSTFSKNYNSQ 581 L D ++S F K ++ Sbjct: 599 ELWDNIKSAFKKKQPAK 615 >gi|62317852|ref|YP_223705.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 1 str. 9-941] gi|83269831|ref|YP_419122.1| putative inner membrane protein translocase component YidC [Brucella melitensis biovar Abortus 2308] gi|163845137|ref|YP_001622792.1| putative inner membrane protein translocase component YidC [Brucella suis ATCC 23445] gi|189023102|ref|YP_001932843.1| putative inner membrane protein translocase component YidC [Brucella abortus S19] gi|225629472|ref|ZP_03787505.1| Inner membrane protein oxaA [Brucella ceti str. Cudo] gi|237817392|ref|ZP_04596384.1| Inner membrane protein oxaA [Brucella abortus str. 2308 A] gi|254690662|ref|ZP_05153916.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 6 str. 870] gi|254696033|ref|ZP_05157861.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 3 str. Tulya] gi|254699142|ref|ZP_05160970.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 2 str. 86/8/59] gi|254700218|ref|ZP_05162046.1| putative inner membrane protein translocase component YidC [Brucella suis bv. 5 str. 513] gi|254705520|ref|ZP_05167348.1| putative inner membrane protein translocase component YidC [Brucella pinnipedialis M163/99/10] gi|254710751|ref|ZP_05172562.1| putative inner membrane protein translocase component YidC [Brucella pinnipedialis B2/94] gi|254732586|ref|ZP_05191164.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 4 str. 292] gi|256015782|ref|YP_003105791.1| putative inner membrane protein translocase component YidC [Brucella microti CCM 4915] gi|256029134|ref|ZP_05442748.1| putative inner membrane protein translocase component YidC [Brucella pinnipedialis M292/94/1] gi|256058817|ref|ZP_05449033.1| putative inner membrane protein translocase component YidC [Brucella neotomae 5K33] gi|256111044|ref|ZP_05452106.1| putative inner membrane protein translocase component YidC [Brucella melitensis bv. 3 str. Ether] gi|256157326|ref|ZP_05455244.1| putative inner membrane protein translocase component YidC [Brucella ceti M490/95/1] gi|256253696|ref|ZP_05459232.1| putative inner membrane protein translocase component YidC [Brucella ceti B1/94] gi|256255844|ref|ZP_05461380.1| putative inner membrane protein translocase component YidC [Brucella abortus bv. 9 str. C68] gi|260167774|ref|ZP_05754585.1| putative inner membrane protein translocase component YidC [Brucella sp. F5/99] gi|260545087|ref|ZP_05820908.1| inner membrane protein [Brucella abortus NCTC 8038] gi|260756233|ref|ZP_05868581.1| inner membrane protein oxaA [Brucella abortus bv. 6 str. 870] gi|260760398|ref|ZP_05872746.1| inner membrane protein oxaA [Brucella abortus bv. 4 str. 292] gi|260763638|ref|ZP_05875970.1| inner membrane protein oxaA [Brucella abortus bv. 2 str. 86/8/59] gi|260882057|ref|ZP_05893671.1| inner membrane protein oxaA [Brucella abortus bv. 9 str. C68] gi|261216465|ref|ZP_05930746.1| inner membrane protein oxaA [Brucella abortus bv. 3 str. Tulya] gi|261220833|ref|ZP_05935114.1| inner membrane protein oxaA [Brucella ceti B1/94] gi|261312924|ref|ZP_05952121.1| inner membrane protein oxaA [Brucella pinnipedialis M163/99/10] gi|261318319|ref|ZP_05957516.1| inner membrane protein oxaA [Brucella pinnipedialis B2/94] gi|261322754|ref|ZP_05961951.1| inner membrane protein oxaA [Brucella neotomae 5K33] gi|261750713|ref|ZP_05994422.1| inner membrane protein oxaA [Brucella suis bv. 5 str. 513] gi|261757211|ref|ZP_06000920.1| inner membrane protein [Brucella sp. F5/99] gi|265986117|ref|ZP_06098674.1| inner membrane protein oxaA [Brucella pinnipedialis M292/94/1] gi|265992579|ref|ZP_06105136.1| inner membrane protein oxaA [Brucella melitensis bv. 3 str. Ether] gi|265995811|ref|ZP_06108368.1| inner membrane protein oxaA [Brucella ceti M490/95/1] gi|297249212|ref|ZP_06932913.1| preprotein translocase YidC subunit [Brucella abortus bv. 5 str. B3196] gi|62198045|gb|AAX76344.1| inner-membrane protein, 60 kDa [Brucella abortus bv. 1 str. 9-941] gi|82940105|emb|CAJ13152.1| 60 kDa inner membrane protein [Brucella melitensis biovar Abortus 2308] gi|163675860|gb|ABY39970.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|189021676|gb|ACD74397.1| 60 kDa inner membrane protein [Brucella abortus S19] gi|225615968|gb|EEH13017.1| Inner membrane protein oxaA [Brucella ceti str. Cudo] gi|237788205|gb|EEP62421.1| Inner membrane protein oxaA [Brucella abortus str. 2308 A] gi|255998442|gb|ACU50129.1| putative inner membrane protein translocase component YidC [Brucella microti CCM 4915] gi|260098358|gb|EEW82232.1| inner membrane protein [Brucella abortus NCTC 8038] gi|260670716|gb|EEX57656.1| inner membrane protein oxaA [Brucella abortus bv. 4 str. 292] gi|260674059|gb|EEX60880.1| inner membrane protein oxaA [Brucella abortus bv. 2 str. 86/8/59] gi|260676341|gb|EEX63162.1| inner membrane protein oxaA [Brucella abortus bv. 6 str. 870] gi|260871585|gb|EEX78654.1| inner membrane protein oxaA [Brucella abortus bv. 9 str. C68] gi|260918072|gb|EEX84933.1| inner membrane protein oxaA [Brucella abortus bv. 3 str. Tulya] gi|260919417|gb|EEX86070.1| inner membrane protein oxaA [Brucella ceti B1/94] gi|261297542|gb|EEY01039.1| inner membrane protein oxaA [Brucella pinnipedialis B2/94] gi|261298734|gb|EEY02231.1| inner membrane protein oxaA [Brucella neotomae 5K33] gi|261301950|gb|EEY05447.1| inner membrane protein oxaA [Brucella pinnipedialis M163/99/10] gi|261737195|gb|EEY25191.1| inner membrane protein [Brucella sp. F5/99] gi|261740466|gb|EEY28392.1| inner membrane protein oxaA [Brucella suis bv. 5 str. 513] gi|262550108|gb|EEZ06269.1| inner membrane protein oxaA [Brucella ceti M490/95/1] gi|262763449|gb|EEZ09481.1| inner membrane protein oxaA [Brucella melitensis bv. 3 str. Ether] gi|264658314|gb|EEZ28575.1| inner membrane protein oxaA [Brucella pinnipedialis M292/94/1] gi|297173081|gb|EFH32445.1| preprotein translocase YidC subunit [Brucella abortus bv. 5 str. B3196] Length = 610 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 267/607 (43%), Positives = 379/607 (62%), Gaps = 29/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41 ME N+F+ IALS++I+ WQ FY+ P+ E + + + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 42 -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 ++ AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ + IS W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYN 579 F + Sbjct: 600 LFRRKPK 606 >gi|148558174|ref|YP_001257934.1| putative inner membrane protein translocase component YidC [Brucella ovis ATCC 25840] gi|148369459|gb|ABQ62331.1| inner-membrane protein, 60 kDa [Brucella ovis ATCC 25840] Length = 610 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 266/607 (43%), Positives = 379/607 (62%), Gaps = 29/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41 ME N+F+ IALS++I+ WQ FY+ P+ E + + + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 42 -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 ++ AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFAGNDATGAVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213 P+ L + N ++ F+R IS+D+ Y+F + DT+ NN + + GR+ ++P+ A+ T Sbjct: 181 PVTLTYTNDKSLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ + IS W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYN 579 F + Sbjct: 600 LFRRKPK 606 >gi|294853976|ref|ZP_06794648.1| preprotein translocase YidC subunit [Brucella sp. NVSL 07-0026] gi|294819631|gb|EFG36631.1| preprotein translocase YidC subunit [Brucella sp. NVSL 07-0026] Length = 610 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 268/607 (44%), Positives = 379/607 (62%), Gaps = 29/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41 ME N+F+ IALS++I+ WQ FY+ P+ E + + + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 42 -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 ++ AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KYS + IS W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYSKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYN 579 F + Sbjct: 600 LFRRKPK 606 >gi|144899247|emb|CAM76111.1| 60 kDa inner membrane insertion protein [Magnetospirillum gryphiswaldense MSR-1] Length = 575 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 218/577 (37%), Positives = 332/577 (57%), Gaps = 15/577 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD--------NS 52 M N F+AIALSV+I++ +Q + + + Sbjct: 1 MNEQRNLFLAIALSVLILFGFQWLFPSKTPAPESAPATTAAGTPPVPTSGDAVVPAPVQT 60 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A + + R AL+ + R+ + P+L GS+++ GA+ DDL L GYH S + LLS Sbjct: 61 AAQMAVKSRTDALATAKRIRINTPTLHGSLSVTGARLDDLTLAGYHETADPTSKEIELLS 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 P+ + Y AE +V ++ P +TVW++ G L+P + + L + N + + F RT+ Sbjct: 121 PTGAAHPYHAEFGWVPVDAGVKTPGPDTVWSVAQGNELSPGSTVVLNWDNGDGLRFVRTV 180 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 S+DE+Y+F+I V N + P G I R + + EG + V +L E Sbjct: 181 SVDENYMFQIAQRVENYGTKPVTLHPFGLISRTGTPKTEGMYILHEGPLGVFD-GTLKEH 239 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSA 291 KY D++K S + W+GI+DKYW + +P ++ +F + D RYQ F+ Sbjct: 240 KYDDLKKLSTERNKTTGGWIGITDKYWLTALVPDQKEELTGRFVHQRADNADRYQVDFTG 299 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + PG + TT LFAGAK + HY + + RF++ ID+GWFYF+ KP F L+ Sbjct: 300 AAKVVAPGAAAETTFHLFAGAKLVSLLDHYTEKFGVERFDLAIDFGWFYFLTKPFFYLLK 359 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + +GN G+AI+ TV +K + FPLA K Y S + MK +QP++ L+E+F L Sbjct: 360 MMNSGLGNMGLAILALTVLIKGIMFPLANKSYASMSKMKLLQPQVKALQERFGDDKV-RL 418 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ M+ LYK +NP++GC PIL+QIPVFFA+YKV+ +++EMRHAPF+GWIKDL+A DPT Sbjct: 419 QQEMMALYKKEKVNPVSGCLPILIQIPVFFALYKVLFVAIEMRHAPFYGWIKDLSAQDPT 478 Query: 472 NIFTLFGILPFYL----PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 I LFG++P+ P F+H+G+WP+IM +M++Q K++P P D QA ++ ++PVVF Sbjct: 479 TIMNLFGLIPWDPALYLPAFLHIGVWPLIMGATMWLQQKLNPQPLDPVQAKMMMFLPVVF 538 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 F L F AGL+IYW+WSN++SI QQ VIM+ +G + Sbjct: 539 TFMLGQFAAGLVIYWAWSNILSIAQQWVIMRKYGVKP 575 >gi|23500746|ref|NP_700186.1| putative inner membrane protein translocase component YidC [Brucella suis 1330] gi|38503028|sp|Q8FV29|OXAA_BRUSU RecName: Full=Inner membrane protein oxaA gi|23464400|gb|AAN34191.1| inner-membrane protein, 60 kDa [Brucella suis 1330] Length = 610 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 267/607 (43%), Positives = 379/607 (62%), Gaps = 29/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41 ME N+F+ IALS++I+ WQ FY+ P+ E + + + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 42 -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 ++ AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ + IS W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIKDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYN 579 F + Sbjct: 600 LFRRKPK 606 >gi|306846225|ref|ZP_07478787.1| inner membrane protein translocase component YidC [Brucella sp. BO1] gi|306273476|gb|EFM55337.1| inner membrane protein translocase component YidC [Brucella sp. BO1] Length = 610 Score = 467 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 267/607 (43%), Positives = 380/607 (62%), Gaps = 29/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41 ME N+F+ IALS++I+ WQ FY+ P+ E + + + Sbjct: 1 MENKRNFFITIALSILILTLWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 42 -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 ++ AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + K LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGTVPGPNTVWVVEGNKKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ N+ + + GR+ ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINDGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ + IS W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYN 579 F + Sbjct: 600 LFRRKPK 606 >gi|254720149|ref|ZP_05181960.1| putative inner membrane protein translocase component YidC [Brucella sp. 83/13] gi|265985155|ref|ZP_06097890.1| inner membrane protein oxaA [Brucella sp. 83/13] gi|306839545|ref|ZP_07472352.1| inner membrane protein translocase component YidC [Brucella sp. NF 2653] gi|264663747|gb|EEZ34008.1| inner membrane protein oxaA [Brucella sp. 83/13] gi|306405377|gb|EFM61649.1| inner membrane protein translocase component YidC [Brucella sp. NF 2653] Length = 610 Score = 467 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 266/607 (43%), Positives = 379/607 (62%), Gaps = 29/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41 ME N+F+ IALS++I+ WQ FY+ P+ E + + + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 42 -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 ++ AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGTVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ N+ + + GR+ ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINDGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ + IS W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYN 579 F + Sbjct: 600 LFRRKPK 606 >gi|90422337|ref|YP_530707.1| putative inner membrane protein translocase component YidC [Rhodopseudomonas palustris BisB18] gi|90104351|gb|ABD86388.1| protein translocase subunit yidC [Rhodopseudomonas palustris BisB18] Length = 632 Score = 467 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 245/629 (38%), Positives = 359/629 (57%), Gaps = 50/629 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 M N N +A+ LS +++ WQ F+ P++E+ ++ Sbjct: 1 MTDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAELASKSQAVNPAQPQGAQPATPAA 60 Query: 52 -----------------------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQ 88 A + R AL+ SPRV++ P L GSI LKGA+ Sbjct: 61 PGAAIPQPNAATAPAGSAPNAIQPQANTPVVSREAALAASPRVKIDTPRLSGSIALKGAR 120 Query: 89 FDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI-ELPNSNTVWNLISG 147 DD+ L + V SP + L SPS + N Y+AE +V+ A ++P+ NT W Sbjct: 121 IDDIALVQFRETVDPKSPAIELFSPSGSANPYYAEFGWVAAAGTSVKIPDQNTQWEQDGT 180 Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 LTP P+ L + N + F RTI++DE YLF + D VTN + P I RH Sbjct: 181 GSLTPNHPVTLKYDNGEGLTFRRTITIDERYLFTMKDEVTNVGNAPVTLYPFALISRHGT 240 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 + + EG + LG++ L E YS I+++ NF +N WLGI+DKYWA+ +P Sbjct: 241 PHVAGYYILHEGLVGYLGEQGLQEYGYSKIDEAKAVNFKVTNGWLGITDKYWAAALLPDT 300 Query: 268 ETSFHSQFKYL-SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT--------- 317 ++F ++ YQ + + TI G + T LFAGAKE T Sbjct: 301 SAQLQARFSSNLANNVRTYQTDYLQDAQTIAIGGTGTANARLFAGAKEAGTVGINFPALG 360 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + Y KDL + F++LIDWGWFYFI KPMF+ + +F++LVGNFGIAI+L TV +KLLF P Sbjct: 361 LGGYNKDLGLNHFDLLIDWGWFYFITKPMFVALDFFFHLVGNFGIAILLVTVIIKLLFLP 420 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 LA K Y S A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC P+LLQI Sbjct: 421 LANKSYASMAKMKAIQPQLAALKERHPDDKAK-QQQEMMEIYRKEKINPVAGCLPVLLQI 479 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVG 491 PVFF++YKV+ +++EMRHAPF+GWI DL+A DPTN+F LFG+L F ++ +G Sbjct: 480 PVFFSLYKVLFVTIEMRHAPFYGWIHDLSAPDPTNLFNLFGLLAFDPTHVPVIGHYLVLG 539 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 WPI+M ++M++QMK++P P D Q MI WMP++F F L+SFPAGL+IYW+W+N++S+V Sbjct: 540 AWPIVMGITMWVQMKLNPTPPDPTQQMIFAWMPLIFTFMLASFPAGLVIYWAWNNLLSVV 599 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 QQ IM+ +G ++ L D L+++F++ + Sbjct: 600 QQGYIMRRNGVKVELFDNLKASFARKKKN 628 >gi|161621071|ref|YP_001594957.1| putative inner membrane protein translocase component YidC [Brucella canis ATCC 23365] gi|254703339|ref|ZP_05165167.1| putative inner membrane protein translocase component YidC [Brucella suis bv. 3 str. 686] gi|260567731|ref|ZP_05838200.1| inner membrane protein oxaA [Brucella suis bv. 4 str. 40] gi|261753969|ref|ZP_05997678.1| inner membrane protein oxaA [Brucella suis bv. 3 str. 686] gi|161337882|gb|ABX64186.1| Inner membrane protein oxaA [Brucella canis ATCC 23365] gi|260154396|gb|EEW89477.1| inner membrane protein oxaA [Brucella suis bv. 4 str. 40] gi|261743722|gb|EEY31648.1| inner membrane protein oxaA [Brucella suis bv. 3 str. 686] Length = 610 Score = 467 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 267/607 (43%), Positives = 379/607 (62%), Gaps = 29/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41 ME N+F+ IALS++I+ WQ FY+ P+ E + + + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEVQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 42 -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 ++ AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ + IS W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIKDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGITMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYN 579 F + Sbjct: 600 LFRRKPK 606 >gi|114765427|ref|ZP_01444542.1| putative inner membrane protein translocase component YidC [Pelagibaca bermudensis HTCC2601] gi|114542270|gb|EAU45300.1| putative inner membrane protein translocase component YidC [Roseovarius sp. HTCC2601] Length = 611 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 206/606 (33%), Positives = 326/606 (53%), Gaps = 29/606 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI------QTVKQPNQVDNSYAA 55 ++N N +A LS +++ W + P + + N T P+ ++ Sbjct: 3 DQNKNLLIATGLSFVVILVWFLLFPPPEEQLQDQAGPNAVETVEGDTATTPSAAPSATTG 62 Query: 56 VLIDDRAQALSM---SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A A + +PRV + L GSI+L G + D+L L+ Y + + +SP V +L Sbjct: 63 GGDTAAAPAQAETVDAPRVAIDTDRLGGSISLTGGRIDELILKDYTVTLDEDSPNVQILE 122 Query: 113 PSNTKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 P N Y+A + + ++P +NT W L SG L+ +P+ L + + ++F R Sbjct: 123 PVGGGNPYYALYGWAPGSGLGLDDVPGANTAWELESGDSLSVDSPVTLRWDSPAGLVFRR 182 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 TIS+DE ++F + +V N + +P G I RH F V + + D L Sbjct: 183 TISIDEDFMFSVTQSVENAGEGTVSAAPYGIIARHGEPADLKNFFVLHEGVVAIADGKLS 242 Query: 231 EQKYSDIEKSSISN---------FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 E YSD+ ++ N W+G +D YW + IP + F KY + Sbjct: 243 EIGYSDMPDMDVNQSEGARAEVTQVTENGWIGFTDHYWMTTLIPQQGAPFKQAAKY-DER 301 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 YQ + +T+ PG++ T LFAGAKE+ TI Y +D + RF IDWGWF+F Sbjct: 302 RDIYQTEAVLPTMTLAPGETQEVTTQLFAGAKEYETIRDY-EDAGVVRFIDSIDWGWFFF 360 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP+F ++ + L+GN G +I+ T+ +K + FPLA K YVS A MK +QP++++L+E Sbjct: 361 LTKPIFWMLHQIHLLIGNMGWSIIGLTLIIKAILFPLAYKSYVSMAKMKELQPEMEKLKE 420 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K Q LQ+ M+ LYK +NP +GC PILLQIP+FF++YKVI ++ E+RHAP++G Sbjct: 421 KAGD-DRQKLQQEMMALYKKEKVNPASGCLPILLQIPIFFSLYKVIFVAFELRHAPWFGP 479 Query: 462 IKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 +DL+ DPT++F LFG+LP+ P + +GI P+++ +SM++Q K++P PAD Sbjct: 480 FQDLSTPDPTSLFNLFGLLPWAAPAPGTTLALVFIGILPLLLGISMWLQQKLNPAPADPT 539 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 Q MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + + + S F Sbjct: 540 QKMIFAWMPWVFMFMLGGFASGLVVYWITNNTITFTQQYLIMRSQGYKPDVFGNIVSGFK 599 Query: 576 KNYNSQ 581 + + Sbjct: 600 RKPKAD 605 >gi|304392412|ref|ZP_07374353.1| inner membrane protein OxaA [Ahrensia sp. R2A130] gi|303295516|gb|EFL89875.1| inner membrane protein OxaA [Ahrensia sp. R2A130] Length = 612 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 257/612 (41%), Positives = 368/612 (60%), Gaps = 32/612 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N+ +A LS+ +V+AWQ + PR+E + Q V++ + Sbjct: 1 MDNQRNFILAAVLSLGVVFAWQALVINPRMEAERAAIEAQQKVEEARTAEAESVPGATTA 60 Query: 61 RAQALSMSP----------------------------RVELKNPSLIGSINLKGAQFDDL 92 RV L +P L GS+NL+G + DDL Sbjct: 61 PQTGAEAGAGVPAGQATSGDGAVPGAAPAASAQSSAGRVPLASPRLEGSVNLQGGRIDDL 120 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L Y V SP + LL+P+ +AYFAE Y +LP +T+W L +G+ LTP Sbjct: 121 RLLDYRETVDDTSPNIQLLTPAGNPDAYFAEFGYSPNEAAGQLPGPSTIWQLAAGERLTP 180 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212 T I L + N + F RTI++D+ Y+F I V N S + P GRI R+ Sbjct: 181 ETSISLQYVNDKGLTFTRTIAMDDDYMFTIEQRVKNESGTDVSLRPYGRIARYGKPETAG 240 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPS--KET 269 + + EG I +G++ L E Y DIE I+ S+ WLGI+DKYWA+ IP Sbjct: 241 IYVLHEGLIGSVGEQGLDEVDYGDIEDDKRITKEPASSGWLGITDKYWATALIPQTKDGG 300 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 +F + + Y S G YQ+ + A+ ++I G+ T FAGAK+ I Y ++L IP Sbjct: 301 TFTAHYNYYSAGTPFYQSDYLASALSIPNGQEQGVTTRFFAGAKKVDIIDAYAENLEIPL 360 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F+ +IDWGWFY++ KP+F+LM++ Y+L+GNFG+AI++ TV VK +FFPLA K Y S ANM Sbjct: 361 FDKIIDWGWFYWLTKPLFLLMNWVYHLIGNFGVAILVVTVLVKAVFFPLANKSYASMANM 420 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K +QP++ +RE+ K + Q AM++LYK INP AGCWP+L+QIPVFFAIYKVI + Sbjct: 421 KKVQPQMTAIREQHKD-DAKAQQAAMMKLYKEEKINPAAGCWPVLIQIPVFFAIYKVIYV 479 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 ++EMRHAPF+GWI+DL+A DPT+IF LFG+LPF +P F+ +G+WP++M ++MF+QM+M+P Sbjct: 480 TIEMRHAPFFGWIQDLSAPDPTSIFNLFGLLPFEVPLFLMIGVWPLLMGITMFVQMQMNP 539 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D QAMI W+PVVF F L++FPAGL+IYW+W+N +SI+QQ +IMK GA+I L D Sbjct: 540 APPDPTQAMIFKWLPVVFTFMLATFPAGLVIYWAWNNFLSIIQQGLIMKRQGAKIELWDN 599 Query: 570 LRSTFSKNYNSQ 581 L+ FSK +++ Sbjct: 600 LKGIFSKKTDAE 611 >gi|161511178|ref|NP_541252.2| putative inner membrane protein translocase component YidC [Brucella melitensis bv. 1 str. 16M] gi|256043891|ref|ZP_05446811.1| putative inner membrane protein translocase component YidC [Brucella melitensis bv. 1 str. Rev.1] gi|260565068|ref|ZP_05835553.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. 16M] gi|265990314|ref|ZP_06102871.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. Rev.1] gi|38503114|sp|Q8YDA3|OXAA_BRUME RecName: Full=Inner membrane protein oxaA gi|260152711|gb|EEW87804.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. 16M] gi|263000983|gb|EEZ13673.1| inner membrane protein oxaA [Brucella melitensis bv. 1 str. Rev.1] Length = 610 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 267/607 (43%), Positives = 378/607 (62%), Gaps = 29/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41 ME N+F+ IALS++I+ WQ FY+ P+ E + + + Sbjct: 1 MENKRNFFITIALSILILALWQVFYLGPKTEAQREQARIEEQQRQAQQAAQNRQASSSTG 60 Query: 42 -------TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 ++ AA R A++ SPR+E+ PSL GSINL GA+ DDL L Sbjct: 61 DTPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYL 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT 154 + YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+T Sbjct: 121 KKYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPST 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNT 213 P+ L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ ++P+ A+ T Sbjct: 181 PVTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASAT 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + EG I V+G L E KY+ + IS W+GI+DKYWA+ IP ++ F Sbjct: 241 YVLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++ Sbjct: 301 GRFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK + Sbjct: 361 LIDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLM 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++E Sbjct: 421 QPKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM + MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGIIMFLQMRMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 540 DPTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKG 599 Query: 573 TFSKNYN 579 F + Sbjct: 600 LFRRKPK 606 >gi|159042884|ref|YP_001531678.1| putative inner membrane protein translocase component YidC [Dinoroseobacter shibae DFL 12] gi|189036349|sp|A8LMA0|OXAA_DINSH RecName: Full=Inner membrane protein oxaA gi|157910644|gb|ABV92077.1| preprotein translocase subunit [Dinoroseobacter shibae DFL 12] Length = 606 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 227/605 (37%), Positives = 340/605 (56%), Gaps = 28/605 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV--------KQPNQVDNSY 53 ++N N +A ALS +++ W + N I P V + Sbjct: 3 DQNKNLILATALSFLVILVWFLLFPPEEPVTDPNAPTQITQSGETADVALTPPAAVTEAA 62 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A +PRV++ P+L GSI+L G + DDL+LR Y+ + +SPIV LLSP Sbjct: 63 PGAAPQTAATPTENAPRVQIDTPALEGSISLLGGRIDDLSLRNYNETLEPDSPIVRLLSP 122 Query: 114 SNTKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + AY+A + + ++P +NT+W + SG LT TP+ L ++N N ++F RT Sbjct: 123 VDAPGAYYALYGWAPAGTLSFDDVPGANTLWTVESGDTLTVDTPVVLRWENGNGLIFRRT 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 +++D+ ++F + +V N + R P G I RH N F + EG +A+ SL+E Sbjct: 183 LAVDDDFMFTVTQSVENTTETDKRMQPYGIIARHGEPDTINFFVLHEGVVAMAD-GSLIE 241 Query: 232 QKYSDIEKSSISNF---------HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 Y D+ E N W+G +DK W + IP+ F S KY+ Sbjct: 242 SDYDDMLDYDFVEREGARAEVEQIEQNGWIGFTDKNWMTTLIPTPGQPFTSVAKYV-GNA 300 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQ + T+ G+++T LFAGAKE+ I YE++L I F IDWGWFYF+ Sbjct: 301 DIYQTETRLPTQTVPGGQTVTVETRLFAGAKEWEAIRGYERELGIEGFIDSIDWGWFYFL 360 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F ++ L+GN G+AI++ T+ +K L PLA K YVS A MK +QP++++L+EK Sbjct: 361 TKPIFFVLHELNLLIGNMGVAIIVLTLLIKALLLPLAWKSYVSMARMKELQPEMEKLKEK 420 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q LQ AM++LYK +NP AGC PILLQIP+FF++YKVI +++E+RHAPF+G Sbjct: 421 AGD-DRQKLQVAMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPFFGPF 479 Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 +DL+A DPT+I LFG+LPF P + +GI P+++ +SM++Q K++P P D Q Sbjct: 480 QDLSAPDPTSIMNLFGLLPFASPEPGSILALIFIGILPLLLGISMWLQQKLNPAPTDPTQ 539 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 AMI W+P VF+F L +F +GLI+YW +NVI+ QQ IM+ HG + L + ++F K Sbjct: 540 AMIFAWLPWVFMFMLGTFASGLIVYWIANNVITFAQQYFIMRRHGYKPDLFGNIVASFKK 599 Query: 577 NYNSQ 581 S+ Sbjct: 600 KKPSE 604 >gi|158425677|ref|YP_001526969.1| putative inner membrane protein translocase component YidC [Azorhizobium caulinodans ORS 571] gi|158332566|dbj|BAF90051.1| 60 kDa inner membrane protein [Azorhizobium caulinodans ORS 571] Length = 607 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 245/607 (40%), Positives = 365/607 (60%), Gaps = 27/607 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY------- 53 M N N F+AI LS++I+ WQ F P+ E+ + Q + S Sbjct: 1 MTDNRNMFIAIGLSLVILIGWQYFIALPQAEKQRQIQAQQQAAQATQTPSPSAEAAQGGG 60 Query: 54 -----------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 A + RAQAL+ +PRV ++ PSL GSI+L+GA+ DDL L + V Sbjct: 61 AAPTAPGSTGVAGSRVMTRAQALAATPRVAIETPSLRGSISLRGARADDLTLSQFRETVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYV-STANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 SP + LLSPS + ++AE + + N+ +P +T+W +G LTP TP+ L + Sbjct: 121 PKSPNIVLLSPSGSPEPFYAEFGWTVAPGANLPVPGPDTLWTAEAGAKLTPATPLVLTWD 180 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 N +LF RT ++D+ Y+F + D V N G + RH + + EG I Sbjct: 181 NGQGLLFRRTFTVDDRYMFTVKDEVENKGAAAATLYSYGLVSRHGMPHTQGYYILHEGLI 240 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-D 280 V+GD L E Y+ ++ + + WLGI+DKYWA+ IP ++ S+F + Sbjct: 241 GVMGDHGLQEVTYAKMDDAKPLAMKATGGWLGITDKYWAATVIPDQKAQVDSRFSSSTVA 300 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G +QA + + +I PG SI + + LFAGAKE + YE+ I RF++LIDWGWFY Sbjct: 301 GTRTFQADYLGSAQSIAPGASIASQSRLFAGAKEVAVVDGYERQYGIDRFDLLIDWGWFY 360 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FI KP+F+++ + Y LVGNFG+AI++ TV +K +FFPLA K Y S A MK +QP++ +R Sbjct: 361 FITKPLFLVIDWIYKLVGNFGVAILIVTVLLKGIFFPLANKSYASMAKMKALQPEMMAIR 420 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E++ + Q+A ++LYK INP+AGC PIL+QIPVFFA+YKV+ +++EMR APF+G Sbjct: 421 ERYADDKVK-QQQATMELYKKEKINPVAGCLPILIQIPVFFALYKVLFVTIEMRQAPFFG 479 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADK 514 WI DL+A DPT +F LFG++P+ ++ +G WP+IM ++M++QMK++P P D Sbjct: 480 WIHDLSAPDPTTVFNLFGLIPWDPSVVPVLGPYLMLGAWPLIMGVTMWVQMKLNPAPPDP 539 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 QAMI N+MP++F F L+ F AGL+IYW+W+N +S++QQAVIM+ +G +I L D + TF Sbjct: 540 TQAMIFNYMPIIFTFMLAHFAAGLVIYWAWNNTLSVLQQAVIMRRNGVKIELWDNITRTF 599 Query: 575 SKNYNSQ 581 SK ++ Sbjct: 600 SKKKTAK 606 >gi|319780382|ref|YP_004139858.1| membrane protein insertase, YidC/Oxa1 family domain containing [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166270|gb|ADV09808.1| membrane protein insertase, YidC/Oxa1 family domain containing [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 603 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 273/600 (45%), Positives = 376/600 (62%), Gaps = 23/600 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------- 41 ME N N+F+ IALSV+I+ WQ FYV PR E + Q Sbjct: 1 MENNRNFFITIALSVLILAVWQYFYVLPRSEAQREAARVEQQRVEEQKKAAGTNPGTDTG 60 Query: 42 TVKQPNQVDNSY--AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 T P + N+ AV R QAL+ + R ++ PSL GSINL GA+ DDL L+ Y Sbjct: 61 TPAAPGAIPNAPGTDAVTPAGREQALATTTRAKIDTPSLEGSINLTGARLDDLKLKHYTE 120 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 V NSP ++LL+P+ N Y+AE+ +V +P TVW + LTPTTP+ L Sbjct: 121 TVDKNSPEISLLNPAALPNGYYAEIGFVGNDKTGAVPGPETVWAVDGNATLTPTTPVTLT 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N + F+RT S+D +Y+F + DTV N + S GR+ R +T+ + EG Sbjct: 181 YSNDKGLTFKRTFSVDTNYMFTVSDTVQNAGTAAVSLSNYGRVTRFDKPLVASTYVLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 I G + L E KY+ IEK + ++ WLGI+DKYWA +P+++ F ++ Y Sbjct: 241 LIGFTGTEGLQEHKYASIEKDKQFTPGKSTDGWLGITDKYWAVTLVPTEKQPFQPRYAYF 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 DG RYQ+ F + IT+ G+S T + +FAGAKE I+ Y +D I RF++LIDWGW Sbjct: 301 EDGRHRYQSDFLTDPITVDAGQSATVESEIFAGAKEVGKINAYAEDRHIKRFDLLIDWGW 360 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+FI KPMF L+ Y GNFG+AI+ TTV VK +F+PLA K Y S ANMK +QPK+ E Sbjct: 361 FHFITKPMFWLIDTLYKFFGNFGLAILATTVIVKAIFYPLANKSYASMANMKKVQPKMLE 420 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+ + Q+AM++LYKT INPLAGCWP+ LQIPVFF++YKV+ I++EMRHAPF Sbjct: 421 IREKYADDKMK-QQQAMMELYKTEKINPLAGCWPVALQIPVFFSLYKVLYITIEMRHAPF 479 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI+DLAA DPT++F LFG++P LP + +G+WP+IM ++MF+QM+M+P P D QA Sbjct: 480 FGWIQDLAAPDPTSLFNLFGLIPVTLPHMLMIGVWPLIMGVTMFLQMRMNPTPPDPTQAA 539 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I WMPV+F F ++ FPAGL+IYW+W+N +SI+QQ +IMK GA+I L D L + F K Sbjct: 540 IFTWMPVIFTFMMAGFPAGLVIYWAWNNTLSILQQGIIMKRQGAKIELWDNLVALFRKKP 599 >gi|146278901|ref|YP_001169060.1| putative inner membrane protein translocase component YidC [Rhodobacter sphaeroides ATCC 17025] gi|145557142|gb|ABP71755.1| protein translocase subunit yidC [Rhodobacter sphaeroides ATCC 17025] Length = 628 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 218/606 (35%), Positives = 329/606 (54%), Gaps = 28/606 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 ++N N +A LS +++ W + P + A + Sbjct: 6 DQNKNLILATGLSFLVIMVWFFLFPPPEAVTQDEPATVATQETALAPSATPDAPMTAVPP 65 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 L +PRV + P L GSI++ G + DDL+L+ YH + S IV LLSP NAY+ Sbjct: 66 DAELPETPRVAIDTPRLQGSISMLGGRIDDLSLKSYHETLDPGSQIVRLLSPVGEPNAYY 125 Query: 122 AELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 A + + ++P +NT W + G L P+ L + N ++F RTIS+D+HY+ Sbjct: 126 ALYGWTPAGALDYEDVPGANTTWTQVGGATLGVDQPVTLEWDNGQGLVFTRTISVDDHYM 185 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F I TV N + + +R +P G + RH F V D L E Y DI + Sbjct: 186 FTISQTVENRTGEAVRLAPYGIVARHGKPLNLQNFFVLHEGAVGRADGELTETNYDDIAE 245 Query: 240 SSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + W+G +DKYW + IP + F S KY+ G YQA+ Sbjct: 246 LPQVAREGALAEVVEAQQDGWIGFTDKYWMTTLIPQQGQPFSSVTKYVP-GADIYQAETR 304 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI---------PRFEMLIDWGWFYF 341 +T+ PG + ++ LFAGAKE+ I Y+ + AI P F IDWGWF+F Sbjct: 305 EQLVTVAPGGTAEVSSRLFAGAKEWEAIRAYQNEGAIEPTEGAEPIPGFIDSIDWGWFFF 364 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP+F ++ + ++GN G+AI+ T +K L PLA K YVS A MK +QP+++ LRE Sbjct: 365 LTKPIFAVLHWLNQMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELEALRE 424 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + ++Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+RHAPF+GW Sbjct: 425 R-AGEDKMLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAPFFGW 483 Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + DL+A DP++IF FG+ P+ P + +GI PI++ +SM++Q K++P P DK Sbjct: 484 LTDLSAPDPSSIFNFFGLAPWAAPTPGSTMALIFIGILPILLGISMWLQQKLNPAPTDKA 543 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 QAMI WMP VF+F L F +GL++YW +NVI+ QQ VIM+ HG L +++ FS Sbjct: 544 QAMIFAWMPWVFMFMLGHFASGLVLYWIVNNVITFSQQYVIMRSHGHHPDLFGNIKAGFS 603 Query: 576 KNYNSQ 581 + +Q Sbjct: 604 RKSAAQ 609 >gi|170743186|ref|YP_001771841.1| 60 kDa inner membrane insertion protein [Methylobacterium sp. 4-46] gi|254773005|sp|B0UHI1|OXAA_METS4 RecName: Full=Inner membrane protein oxaA gi|168197460|gb|ACA19407.1| 60 kDa inner membrane insertion protein [Methylobacterium sp. 4-46] Length = 624 Score = 464 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 244/621 (39%), Positives = 363/621 (58%), Gaps = 44/621 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------------------------E 32 N +AIALS+ ++ W F P++E Sbjct: 3 NDKTNMIIAIALSLAVLLGWNYFVTAPQVERQRQQQAAQVNPSQGVNPSQGVDPSQGVNA 62 Query: 33 MNNERKNIQTVKQPNQVDNSY--AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFD 90 + ++ + P + + + R +AL+ +PRV + +L GS+ LKG + D Sbjct: 63 SPSPKEGGPSAPVPGTLPGAAGGSPQAALARDEALARAPRVRIDTEALRGSVALKGGRID 122 Query: 91 DLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL 150 D+ L+GYH V SP + LLSP+ + N Y+AE +V LP S+TVW G +L Sbjct: 123 DVALKGYHETVDPKSPEIVLLSPAGSANPYYAEFGWVGQNAGP-LPGSDTVWT-ADGDVL 180 Query: 151 TPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210 T P+ L F N ++F RT+S+D+ Y+F I D+V N + + P G + R Sbjct: 181 TAKKPLVLTFDNGAGLVFRRTLSVDDKYMFTIEDSVENKGPNPVTLYPYGLVSRWGKPHT 240 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS---------ISNFHESNSWLGISDKYWAS 261 + + EG I V+GDK L E Y + K + +S + +LGI+DKYWA+ Sbjct: 241 QGYYVLHEGMIGVVGDKGLQEYTYDKMAKENPLGAPGTRGVSWPGATGGFLGITDKYWAA 300 Query: 262 VFIPSKETSFHSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 IP ++ + F +G + YQA + PG S+ + LFAGAKE T+ Sbjct: 301 ATIPDQQAPYTGSFTERDEGATKVYQASSLGEARAVAPGASVQASQRLFAGAKEVSTVDA 360 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 Y + L I +F++LIDWGWFYFI KPMF + FY L GNFG++I++ T+ +KL F P+A Sbjct: 361 YREKLNIKQFDLLIDWGWFYFITKPMFKALDLFYKLFGNFGVSILVVTLILKLFFLPIAN 420 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 + YVS A MK +QP++ +RE++ + Q+AM++LYK INP+AGCWP+L+QIPVF Sbjct: 421 RSYVSMAKMKAVQPEMTAIRERYADDKVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVF 479 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 F++YKV+ +++EMRHAPF+GWI+DLAA DPT+I LFG+LPF P +H+G+WPI+M ++ Sbjct: 480 FSLYKVLFVTIEMRHAPFFGWIRDLAAPDPTSIVNLFGLLPFTPPDLLHLGVWPIVMGIT 539 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 MF+QMKM+P P D QA + +MP++F F L SFPAGL+IYW+W+N++SI+QQ IM+ + Sbjct: 540 MFLQMKMNPAPPDPVQAQVFTFMPIIFTFMLGSFPAGLVIYWAWNNLLSILQQYWIMRRN 599 Query: 561 GAEIGLIDRLRSTFSKNYNSQ 581 G ++ L D LRSTF + + Sbjct: 600 GVKVELWDNLRSTFQRRTQVK 620 >gi|39933709|ref|NP_945985.1| putative inner membrane protein translocase component YidC [Rhodopseudomonas palustris CGA009] gi|39647556|emb|CAE26076.1| 60 kDa inner membrane protein [Rhodopseudomonas palustris CGA009] Length = 622 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 245/621 (39%), Positives = 355/621 (57%), Gaps = 43/621 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-------- 52 M N N +A+ LS +++ WQ F+ P++E+ ++ Q + + Sbjct: 1 MSDNRNTILAVVLSGLVLLGWQYFFNIPQMEKQRAAQQAQQQAAKQQAETQTPGAASPAA 60 Query: 53 -----------------YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 AA R AL+ PR++++ P L GSI LKGA+ DDL L Sbjct: 61 APAAPGAPGSAPASPQQPAAAPTVSREAALAAGPRIKVETPRLSGSIALKGARIDDLALM 120 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTT 154 Y V SP + L SPS + Y+AE +V A +++LP+ NT+W LTP Sbjct: 121 QYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGASVKLPDHNTLWEQEGTGALTPAN 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 P+ L + N + F R I++D+ YLF + D VTN + P I RH + Sbjct: 181 PVTLKWDNGEGLTFRRQITVDDRYLFTVKDDVTNTGGAPVTLYPFALISRHGTPHVEGYY 240 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 + EG I LGD+ L E YS I+++ F +N WLGI+DKYWAS +P ++ Sbjct: 241 ILHEGLIGYLGDQGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDTSAQLQAR 300 Query: 275 FKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYEKD 324 F YQ + + T+ G ++T LFAGAKE + Y++ Sbjct: 301 FSANKVGNVTTYQTDYLEDARTVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYDRQ 360 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 L + F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV VKLLF PLA K Y Sbjct: 361 LGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLLFLPLANKSYA 420 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC PILLQIPVFF++Y Sbjct: 421 SMAKMKAIQPQLAALKERHPDDKVK-QQQEMMEIYRKEKINPVAGCLPILLQIPVFFSLY 479 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMS 498 KV+ +++EMRHAPF+GWI DL+A DPTNIF LFG++P+ ++ +G WP++M Sbjct: 480 KVLFVTIEMRHAPFFGWIHDLSAPDPTNIFNLFGLIPYDPTAIPVLGHYLVLGAWPLVMG 539 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +M+ QMK++P P D Q MI WMPV+F F L+ FPAGL+IYW+W+N +S+ QQA IM+ Sbjct: 540 FTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVAQQAFIMQ 599 Query: 559 MHGAEIGLIDRLRSTFSKNYN 579 +G ++ L D LR++F+K Sbjct: 600 RNGVKVELWDNLRTSFAKKKK 620 >gi|192289066|ref|YP_001989671.1| inner membrane protein translocase component YidC [Rhodopseudomonas palustris TIE-1] gi|192282815|gb|ACE99195.1| 60 kDa inner membrane insertion protein [Rhodopseudomonas palustris TIE-1] Length = 622 Score = 463 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 245/621 (39%), Positives = 355/621 (57%), Gaps = 43/621 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-------- 52 M N N +A+ LS +++ WQ F+ P++E+ ++ Q + + Sbjct: 1 MSDNRNTILAVVLSGLVLLGWQYFFNIPQMEKQRAAQQAQQQAAKQQAETQTPGAASPAA 60 Query: 53 -----------------YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 AA R AL+ PR++++ P L GSI LKGA+ DDL L Sbjct: 61 APAAPGAPGSAPASPQQQAAAPTVSREAALAAGPRIKVETPRLSGSIALKGARIDDLALM 120 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTT 154 Y V SP + L SPS + Y+AE +V A +++LP+ NT+W LTP Sbjct: 121 QYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGASVKLPDHNTLWEQEGTGALTPAN 180 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 P+ L + N + F R I++D+ YLF + D VTN + P I RH + Sbjct: 181 PVTLKWDNGEGLTFRRQITVDDRYLFTVKDDVTNTGGAPVTLYPFALISRHGTPHVEGYY 240 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 + EG I LGD+ L E YS I+++ F +N WLGI+DKYWAS +P ++ Sbjct: 241 ILHEGLIGYLGDQGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDTSAQLQAR 300 Query: 275 FKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYEKD 324 F YQ + + T+ G ++T LFAGAKE + Y++ Sbjct: 301 FSANKVGNVTTYQTDYLEDARTVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYDRQ 360 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 L + F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV VKLLF PLA K Y Sbjct: 361 LGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLLFLPLANKSYA 420 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC PILLQIPVFF++Y Sbjct: 421 SMAKMKAIQPQLAALKERHPDDKVK-QQQEMMEIYRKEKINPVAGCLPILLQIPVFFSLY 479 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMS 498 KV+ +++EMRHAPF+GWI DL+A DPTNIF LFG++P+ ++ +G WP++M Sbjct: 480 KVLFVTIEMRHAPFFGWIHDLSAPDPTNIFNLFGLIPYDPTAIPVLGHYLVLGAWPLVMG 539 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +M+ QMK++P P D Q MI WMPV+F F L+ FPAGL+IYW+W+N +S+ QQA IM+ Sbjct: 540 FTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVAQQAFIMQ 599 Query: 559 MHGAEIGLIDRLRSTFSKNYN 579 +G ++ L D LR++F+K Sbjct: 600 RNGVKVELWDNLRTSFAKKKK 620 >gi|260461161|ref|ZP_05809410.1| 60 kDa inner membrane insertion protein [Mesorhizobium opportunistum WSM2075] gi|259033195|gb|EEW34457.1| 60 kDa inner membrane insertion protein [Mesorhizobium opportunistum WSM2075] Length = 603 Score = 463 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 270/600 (45%), Positives = 372/600 (62%), Gaps = 23/600 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA------ 54 ME N N+F+ IALSV+I+ WQ FY+ PR+E+ K Q + + Sbjct: 1 MENNRNFFITIALSVLILTLWQVFYMNPRVEQQREAAKIEQQRVEEQKKAAEATNPGAAT 60 Query: 55 ---------------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 AV R QAL+ S RV++ PSL GSINL GA+ DDL L+ Y Sbjct: 61 PAPAPGTIPNAPGGDAVTAAGRDQALAASKRVKIDTPSLEGSINLTGARLDDLKLKHYTE 120 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 V NSP + LL+P YFAE+ +V +P S+TVW++ L+P+TP+ L Sbjct: 121 TVDKNSPEIELLNPQALPTGYFAEIGFVGNDKTGAVPGSDTVWSVEGNPTLSPSTPVTLT 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N + F+R S+D +Y+F + DTV N+ + GR+ R+ +T+ + EG Sbjct: 181 YTNDKGLTFKRVFSVDANYMFTVTDTVQNSGASAVSLFNYGRVTRYDKPAVASTYVLHEG 240 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 I V G + L E KY+ IE ++ WLGI+DKYWA +P+++ F ++ + Sbjct: 241 LIGVTGTEGLAEYKYAKIESEKQVTPGKSTDGWLGITDKYWAVTLVPTEKQPFQPRYAFF 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 DG RYQ+ F + I + G+S T +FAGAKE I+ YE D I +F ++IDWGW Sbjct: 301 EDGRHRYQSDFLTDAINVDAGQSATVETEIFAGAKEVAKINAYEADRHIRQFNLVIDWGW 360 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FYFI KPMF L+ Y GNFG+AI+ TTV VK LFFPLA K Y S ANMK +QPK+ E Sbjct: 361 FYFITKPMFWLIDTLYKFFGNFGLAILATTVIVKALFFPLANKSYASMANMKKVQPKMLE 420 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+ + Q+AM++LYKT INPLAGCWP+ LQIPVFF++YKV+ I++EMRHAPF Sbjct: 421 IREKYADDKMK-QQQAMMELYKTEKINPLAGCWPVALQIPVFFSLYKVLYITIEMRHAPF 479 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 +GWI+DLAA DPT+IF LFG++P LP + +G+WP+IM ++MF+QM+M+P P D QA Sbjct: 480 FGWIQDLAAPDPTSIFNLFGLVPVTLPHMLMIGVWPLIMGVTMFLQMRMNPTPPDPTQAA 539 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I WMPV+F F ++ FPAGL+IYW+W+N +SI+QQ +IMK GA+I L D L + F K Sbjct: 540 IFTWMPVIFTFMMAGFPAGLVIYWAWNNTLSILQQGLIMKRQGAKIELWDNLVALFRKKP 599 >gi|218530582|ref|YP_002421398.1| YidC translocase/secretase [Methylobacterium chloromethanicum CM4] gi|254773000|sp|B7L2I5|OXAA_METC4 RecName: Full=Inner membrane protein oxaA gi|218522885|gb|ACK83470.1| YidC translocase/secretase [Methylobacterium chloromethanicum CM4] Length = 616 Score = 463 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 247/613 (40%), Positives = 366/613 (59%), Gaps = 38/613 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIE----------------------EMNNERKN 39 N FVAIALS++++ W F P E + R+ Sbjct: 3 NDKTNMFVAIALSLVVLLGWHYFVTGPASERQRQAAQSQAAQTGAPQTADGIPSPSPREG 62 Query: 40 IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 P + + A + R AL+ S RV + P+L GSI LKGA+ DD++L+ YH Sbjct: 63 SPNAPAPGTLPGAAAQGPV-SREDALARSARVRIDTPALYGSIGLKGARIDDVSLKNYHE 121 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 VS SP + LLSP+ + N Y+AE +V LPN++T+W G +L P P+ L Sbjct: 122 TVSDESPRIVLLSPTGSANPYYAEFGWVGANAGP-LPNADTLWK-ADGDLLAPGRPLTLT 179 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N ++F+R +++D+ ++F + D V N S + + P + R + + EG Sbjct: 180 WDNGQGLVFKRIVAVDDKFMFTVRDEVENTSANPVTLYPYSLVSRWGKPQTQGYYVLHEG 239 Query: 220 FIAVLGDKSLVEQKYSDIEKSS---------ISNFHESNSWLGISDKYWASVFIPSKETS 270 I VLG L E Y + K + + + W+GI+DKYWA+ IP ++ Sbjct: 240 LIGVLGGDGLQEYTYDKVGKEPAYGGAATQGKAWTNVTGGWVGITDKYWAAAAIPEQDKP 299 Query: 271 FHSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 F F +DG + YQ + +T+ P S TT LFAGAKE I+ YE++ I + Sbjct: 300 FTGAFTERTDGATKIYQTSVRGDAVTLAPNASSVTTQRLFAGAKEVNRINAYEREFGIKQ 359 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F+++IDWGWF+F+ KPMF + +F++L+GNFG++I+L T+ +KL F P+A + YVS A M Sbjct: 360 FDLMIDWGWFWFLTKPMFRALDFFFHLLGNFGVSILLVTLILKLFFLPIANRSYVSMAKM 419 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K +QP++ +RE++K + Q+AM++LYK INP+AGCWP+L+QIPVFFA+YKV+ I Sbjct: 420 KAVQPEMTSIRERYKDDRVK-QQQAMMELYKKEKINPVAGCWPVLIQIPVFFALYKVLFI 478 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV--GIWPIIMSLSMFIQMKM 507 ++EMRHAPF+GWI+DLAA DPT+I LFG+LPF P ++ + G+WPIIM ++MFIQMKM Sbjct: 479 TIEMRHAPFFGWIQDLAAPDPTSIVNLFGLLPFTPPEYIPIHLGVWPIIMGITMFIQMKM 538 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 +P P D QA + +MP+VF F L SFPAGL+IYW+W+N +S++QQ VIM+ +G ++ L Sbjct: 539 NPAPPDPVQAQVFAFMPIVFTFMLGSFPAGLVIYWAWNNTLSVIQQYVIMRRNGVKVELW 598 Query: 568 DRLRSTFSKNYNS 580 D LR F + S Sbjct: 599 DNLRGMFKRGNKS 611 >gi|312113264|ref|YP_004010860.1| membrane protein insertase, YidC/Oxa1 family [Rhodomicrobium vannielii ATCC 17100] gi|311218393|gb|ADP69761.1| membrane protein insertase, YidC/Oxa1 family [Rhodomicrobium vannielii ATCC 17100] Length = 711 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 240/609 (39%), Positives = 346/609 (56%), Gaps = 34/609 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------- 45 M+ N N+ +AIALS+ ++ WQ Y+ P ++ + Q Sbjct: 1 MDNNRNFIIAIALSLSVLLGWQFLYMKPASDKARQQAIEAQQQTAGEQGTDPTVGGAAIP 60 Query: 46 --PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 + V R AL+ + R+ SL GSINLKG DD+ L+ Y V Sbjct: 61 PRASSVIPVPTTPKFASREAALAATQRIAFDTSSLTGSINLKGGSVDDVTLKEYRQTVDP 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 NSP VTLLSP+ + Y+A + S +I +P +TVW L P P+ L + N Sbjct: 121 NSPPVTLLSPAGSPEPYYAYTGWYSDQADISVPGPDTVWKQQGTGALAPGKPVTLTWDNG 180 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIA 222 ++F+R I+LDEHY+F I DTV N + + PR + R ++P + EG I Sbjct: 181 KGLVFKRAITLDEHYMFTITDTVENKTGKPVTLRPRAEVARLYEPTNLFGYSVLHEGLIG 240 Query: 223 VLGDKSLVEQKYSDIEKS-----------SISNFHESNSWLGISDKYWASVFIPSKETSF 271 + D L E YS K+ S + WLG +D+YWA+V +P + Sbjct: 241 LFKDAGLKELTYSSAIKNFDPAADNGKGVSKEIISDKGGWLGFTDQYWAAVLVPDQSKPL 300 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++ + +FS N +T+ G S T TN LFAGAK+ I Y D I RF+ Sbjct: 301 TARLFGTPQKD--FFVEFSENPVTVATGASETFTNKLFAGAKKVVLIEQYMADDKIDRFD 358 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 L+DWGWF F+ +P++ L+++ Y VGNFGIAI+LTTV VK+LFFPLA K Y + +K Sbjct: 359 KLVDWGWFPFLTQPLYFLLNWLYLHVGNFGIAILLTTVLVKVLFFPLANKSYSAMNKLKM 418 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ +++E+FK Q Q AM+ LYK +NP AGC PIL+QIPVFFA+YKV+ +S+ Sbjct: 419 LQPEMKKIQERFKDDK-QRQQHAMMTLYKKEKVNPAAGCLPILVQIPVFFALYKVLLVSI 477 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 EMRHAPF+GWI DL+A DPTNIFTLFG++P+ P FM +G P+IM SM++QM+++P P Sbjct: 478 EMRHAPFYGWIHDLSAPDPTNIFTLFGLIPWTPPHFMMLGALPLIMGCSMWLQMRLNPTP 537 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D Q I WMPV+F F L+ F AGLI+YW+W+N+++ QQA+IMK + L++++ Sbjct: 538 PDPIQQKIFAWMPVLFTFMLAPFQAGLILYWTWNNILTFAQQALIMKRQDKNMNLLEQI- 596 Query: 572 STFSKNYNS 580 K+ + Sbjct: 597 -GLKKSNGA 604 >gi|89068160|ref|ZP_01155577.1| putative inner membrane protein translocase component YidC [Oceanicola granulosus HTCC2516] gi|89046399|gb|EAR52456.1| putative inner membrane protein translocase component YidC [Oceanicola granulosus HTCC2516] Length = 597 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 211/596 (35%), Positives = 339/596 (56%), Gaps = 29/596 (4%) Query: 1 MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ----------V 49 M+ N N +A ALS I++ W + P + + + Sbjct: 1 MDDQNKNLILATALSFIVILIWFVLFPPPEQAPGLTNAEGEVVAQDDTALRDEMSPDGAI 60 Query: 50 DNSYAAVLIDDRAQ-ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 D + A + Q A + RV ++ P L+GSIN G + DDL L YH + +SP+V Sbjct: 61 DGTAAGTPVATLEQDAPVEAARVAIETPRLVGSINTAGGRIDDLKLTAYHETLDPDSPLV 120 Query: 109 TLLSPSNTKNAYFAELDYV--STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 LLSP + Y+A ++ S A+ E+P +TVW + G+ LTP +P+ L ++N + Sbjct: 121 RLLSPGGEEAQYYALHGWIALSGASADEVPGDSTVWEIEEGETLTPDSPVVLRWENGAGL 180 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 +F +TI++D++YLF + +V N + D + P G++ RH + F + EG + + Sbjct: 181 VFRKTIAVDDNYLFTVTQSVENTTGDAVELRPYGQVRRHGLPDSRQFFILHEGVVRMADG 240 Query: 227 KSLVEQKYSDIEK---SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 L E Y D+ + W+G +DKYW + +P+ T F S + ++ Sbjct: 241 -ELEEIDYDDLPDLTAEESRIEVAEDGWVGFTDKYWMTTLVPASGTPFRSVAREVNG--- 296 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y + + + G++++ + +FAGAKE+ TI Y + I RF IDWGWF+F+ Sbjct: 297 IYLTESIYPPVAVAAGETVSAESHVFAGAKEWETIRAY-EAAGIDRFVDSIDWGWFFFLT 355 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ + ++GN G +I++ T+ +K + FPLA K Y S A MK +QP++++L+E+ Sbjct: 356 KPIFALLHWLNGVIGNMGWSIIVLTLIIKAVLFPLAYKSYASMAKMKELQPEMEKLKERA 415 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q LQK M++LYKT+ +NP +GC PILLQIP+FF++YKVI ++LE+RHAP+ GWI+ Sbjct: 416 GD-DRQALQKGMMELYKTNKVNPASGCLPILLQIPIFFSLYKVIFVTLELRHAPWIGWIR 474 Query: 464 DLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+A DP++I LFG+LP+ P +G+ PI++ +SM++Q K++P P D Q Sbjct: 475 DLSAPDPSSILNLFGLLPWDTPDPGSIFFIFSLGVLPILLGISMWLQQKLNPAPPDPTQR 534 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 MI WMP VF+F L SF +GL+IYW +N+I+ QQ +IM+ HG + ++ +R Sbjct: 535 MIFAWMPWVFMFMLGSFASGLVIYWIANNMITFTQQYLIMRSHGYKPDILGNIRGK 590 >gi|92119160|ref|YP_578889.1| putative inner membrane protein translocase component YidC [Nitrobacter hamburgensis X14] gi|122416784|sp|Q1QH68|OXAA_NITHX RecName: Full=Inner membrane protein oxaA gi|91802054|gb|ABE64429.1| protein translocase subunit yidC [Nitrobacter hamburgensis X14] Length = 609 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 243/605 (40%), Positives = 365/605 (60%), Gaps = 25/605 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N N +AI LS +I+ AWQ FY P++E+ ++ + + Sbjct: 2 MSENRNTIIAIVLSGLILIAWQYFYNIPQMEKDRAAQQAQSQTAKSPTEPTPNSPKPDHP 61 Query: 61 RAQ-------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A+ A++ +PRV++ P L GSI+LKGA+ DDL L + V SP + L SP Sbjct: 62 AAESVVARGVAIATTPRVKIDTPRLSGSISLKGARIDDLLLTKFRETVDPASPAIELFSP 121 Query: 114 SNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 S T Y+AE +V+ T + +P+ NTVW LT +TP+ L + N + F RTI Sbjct: 122 SGTTTPYYAEFGWVAATGSTARVPDQNTVWQQEGSGALTQSTPVTLKYDNGEGLTFRRTI 181 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 ++D+HYLF I D VTN + P I RH + + + EG I LGD+ L E Sbjct: 182 AVDDHYLFTIKDEVTNAGGAPVTLYPFALISRHGTPAVSGYYILHEGLIGYLGDQKLQEY 241 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQAKFSA 291 Y I+++ +F +N WLGI+DKYWA+ +P ++F G + YQA + Sbjct: 242 SYKKIDEAKSVSFKVTNGWLGITDKYWAAALLPDTSAQLQARFSSNESGSVKTYQADYLE 301 Query: 292 NEITILPGKSITTTNFLFAGAKE---------FPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 + TI G + + LFAGAKE F + Y K L + F++LIDWGWFYFI Sbjct: 302 DAQTIPVGGTGSVNTRLFAGAKEAGVVGINFPFVELGGYNKQLGLNHFDLLIDWGWFYFI 361 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KPMF+ + +F+++ GNFGIAI+ TV +K +FFPLA + Y S A MK +QP+I L+E+ Sbjct: 362 TKPMFLALDFFFHVFGNFGIAILFVTVLIKAIFFPLANRSYASMAKMKAVQPQIAALKER 421 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 F + LQ+ M+++YK INP++GC P++LQIPVFF++YKV+ +++EMRHAPF+ WI Sbjct: 422 FPDDKMK-LQQEMMEIYKKEKINPISGCLPMVLQIPVFFSLYKVLFVTIEMRHAPFFAWI 480 Query: 463 KDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 KDL+A DPT+IF LFG+LP+ ++ +G WPIIM ++M+ QMK++P P D Q Sbjct: 481 KDLSAPDPTHIFNLFGLLPYDPSAVPLLGPYLAIGAWPIIMGITMWFQMKLNPTPPDPTQ 540 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +I +WMPV+F F L++FPAGL+IYW+W+N +S++QQ+ IM+ +G ++ L++ ++S F + Sbjct: 541 KLIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVIQQSYIMRRNGVKVELLNNVKSVFRR 600 Query: 577 NYNSQ 581 + + Sbjct: 601 KSSDK 605 >gi|84515675|ref|ZP_01003036.1| putative inner membrane protein translocase component YidC [Loktanella vestfoldensis SKA53] gi|84510117|gb|EAQ06573.1| putative inner membrane protein translocase component YidC [Loktanella vestfoldensis SKA53] Length = 605 Score = 461 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 205/597 (34%), Positives = 325/597 (54%), Gaps = 21/597 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--PNQVDNSYAAVLID 59 E+N N +A LS ++ W + I + Q+V P + A Sbjct: 3 EQNRNLILATLLSFAVIMTWTLLFPPEEIAVDPAAQVATQSVDPTVPLADPVTPDATSPA 62 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 Q R+ ++ P L GSI++ G + DDL L Y + ++PIV LL P +A Sbjct: 63 IVEQTAPDVARIAIETPELTGSISMLGGRIDDLALTDYRETLDEDAPIVRLLRPVGELDA 122 Query: 120 YFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 YFA + +T +P +T+W++ +G+ LTP+TP+ LV+ N +F IS+D+ Sbjct: 123 YFAAFGWTATDGIDPAAVPGPDTIWSVETGETLTPSTPVTLVWDNGAGQIFRTEISVDDL 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 ++F ++ N + + P G + RH + F + + + D L E YS+I Sbjct: 183 FMFSFAQSIQNVGTETVSARPYGLVRRHGEPSDAKRFFILHEGLVRMSDGELEETSYSNI 242 Query: 238 EKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + + W+G +D +W + IP+ T F S KY + YQ + Sbjct: 243 TDHTFDERERTLADRIDVQQSGWIGYTDHFWMTTLIPATGTPFRSTSKYF-EARDLYQVE 301 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + G++ T T LFAGAKE+ I HYE + + RF IDWGWF+F+ KP+F Sbjct: 302 AVMPPSVVPAGETATVTIRLFAGAKEWEAITHYENETGVDRFIDSIDWGWFFFLTKPIFW 361 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ ++GN G +I+ T+ +K L PLA K YVS A MK +QP++++L+E+ Sbjct: 362 LLHNLNIIIGNMGWSILALTLILKALVLPLAYKSYVSMARMKELQPEMEKLKERAGD-DR 420 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q +Q+ M++LYK + +NP AGC PILLQIP+FF++YKVI +++E+RHAP+ GWI DL+A Sbjct: 421 QAMQQGMMKLYKENTVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPWIGWIDDLSAP 480 Query: 469 DPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DP+++ LFG+LP+ P + +G+ PI++ +SM++Q K++P P D Q MI W Sbjct: 481 DPSSLINLFGLLPYAAPDPGSILSLIFIGLLPILLGISMWMQQKLNPAPTDPTQQMIFAW 540 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 MP VF+F L F +GL++YW +N I+ VQQ IM+ HGA+ + ++S + Sbjct: 541 MPWVFMFMLGGFASGLVLYWIANNCITFVQQYAIMRSHGAKPDVFGNIKSGLKRKKP 597 >gi|332559538|ref|ZP_08413860.1| membrane protein insertase [Rhodobacter sphaeroides WS8N] gi|332277250|gb|EGJ22565.1| membrane protein insertase [Rhodobacter sphaeroides WS8N] Length = 623 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 215/606 (35%), Positives = 331/606 (54%), Gaps = 29/606 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 ++N N +A LS +++ W + P Q + Sbjct: 3 DQNKNLILATGLSFLVIMVWFFLFPPPEAVTEGEPTVATQQTAVAPSATPDAPTTAVPPD 62 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A+ L + RV + P L GSI++ G + DDL+L+ YH + S IV LLSP NAY+ Sbjct: 63 AE-LPETQRVVIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPNAYY 121 Query: 122 AELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 A + ++P +NT W + L P+ L + N ++F RTIS+D+HY+ Sbjct: 122 ALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDDHYM 181 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F + TV NNS ++ +P G + RH F V + D L E KY + + Sbjct: 182 FSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVGRADGKLTETKYDKVAE 241 Query: 240 SSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + W+G +DKYW + IP + F S KY+ G YQA+ Sbjct: 242 LPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYVP-GADIYQAETR 300 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWGWFYF 341 +T+ PG + ++ LFAGAKE+ TI Y+ + A IP F IDWGWF+F Sbjct: 301 EQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWGWFFF 360 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP+F ++ + +++GN G+AI+ T +K L PLA K YVS A MK +QP+++ LRE Sbjct: 361 LTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELEALRE 420 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + ++Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+RHAPF+GW Sbjct: 421 RAGDDK-MLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAPFFGW 479 Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 +KDL+A DP++IF FG+ P+ P + +G PI++ +SM++Q K++P P DK Sbjct: 480 LKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAPGDKA 539 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 QAMI WMP VF+F L F +GL++YW +N+I+ QQ VIM+ HG + ++++FS Sbjct: 540 QAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIKASFS 599 Query: 576 KNYNSQ 581 + +Q Sbjct: 600 RKPAAQ 605 >gi|126463485|ref|YP_001044599.1| putative inner membrane protein translocase component YidC [Rhodobacter sphaeroides ATCC 17029] gi|166977405|sp|A3PNB1|OXAA_RHOS1 RecName: Full=Inner membrane protein oxaA gi|126105149|gb|ABN77827.1| protein translocase subunit yidC [Rhodobacter sphaeroides ATCC 17029] Length = 623 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 215/606 (35%), Positives = 331/606 (54%), Gaps = 29/606 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 ++N N +A LS +++ W + P Q + Sbjct: 3 DQNKNLILATGLSFLVIMVWFFLFPPPEAVTEGETTVATQQTAVAPSATPDAPTTAVPPD 62 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A+ L + RV + P L GSI++ G + DDL+L+ YH + S IV LLSP NAY+ Sbjct: 63 AE-LPETQRVVIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPNAYY 121 Query: 122 AELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 A + ++P +NT W + L P+ L + N ++F RTIS+D+HY+ Sbjct: 122 ALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDDHYM 181 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F + TV NNS ++ +P G + RH F V + D L E KY + + Sbjct: 182 FSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVGRADGKLTETKYDKVAE 241 Query: 240 SSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + W+G +DKYW + IP + F S KY+ G YQA+ Sbjct: 242 LPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYVP-GADIYQAETR 300 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWGWFYF 341 +T+ PG + ++ LFAGAKE+ TI Y+ + A IP F IDWGWF+F Sbjct: 301 EQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWGWFFF 360 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP+F ++ + +++GN G+AI+ T +K L PLA K YVS A MK +QP+++ LRE Sbjct: 361 LTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELEALRE 420 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + ++Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+RHAPF+GW Sbjct: 421 RAGDDK-MLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAPFFGW 479 Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 +KDL+A DP++IF FG+ P+ P + +G PI++ +SM++Q K++P P DK Sbjct: 480 LKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAPGDKA 539 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 QAMI WMP VF+F L F +GL++YW +N+I+ QQ VIM+ HG + ++++FS Sbjct: 540 QAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIKASFS 599 Query: 576 KNYNSQ 581 + +Q Sbjct: 600 RKPAAQ 605 >gi|221640557|ref|YP_002526819.1| putative inner membrane protein translocase component YidC [Rhodobacter sphaeroides KD131] gi|254773018|sp|B9KNZ6|OXAA_RHOSK RecName: Full=Inner membrane protein oxaA gi|221161338|gb|ACM02318.1| Inner membrane protein oxaA [Rhodobacter sphaeroides KD131] Length = 623 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 215/606 (35%), Positives = 330/606 (54%), Gaps = 29/606 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 ++N N +A LS +++ W + P Q + Sbjct: 3 DQNKNLILATGLSFLVIMVWFFLFPPPEAVTEGEPTVATQQTAVAPSATPDAPTTAVPPD 62 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A L + RV + P L GSI++ G + DDL+L+ YH + S IV LLSP NAY+ Sbjct: 63 AD-LPETRRVAIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPNAYY 121 Query: 122 AELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 A + ++P +NT W + L P+ L + N ++F RTIS+D+HY+ Sbjct: 122 ALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDDHYM 181 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F + TV NNS ++ +P G + RH F V + D L E KY + + Sbjct: 182 FSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVGRADGKLTETKYDKVAE 241 Query: 240 SSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + W+G +DKYW + IP + F S KY+ G YQA+ Sbjct: 242 LPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYVP-GADIYQAETR 300 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWGWFYF 341 +T+ PG + ++ LFAGAKE+ TI Y+ + A IP F IDWGWF+F Sbjct: 301 EQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWGWFFF 360 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP+F ++ + +++GN G+AI+ T +K L PLA K YVS A MK +QP+++ LRE Sbjct: 361 LTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELEALRE 420 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + ++Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+RHAPF+GW Sbjct: 421 RAGDDK-MLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAPFFGW 479 Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 +KDL+A DP++IF FG+ P+ P + +G PI++ +SM++Q K++P P DK Sbjct: 480 LKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAPGDKA 539 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 QAMI WMP VF+F L F +GL++YW +N+I+ QQ VIM+ HG + ++++FS Sbjct: 540 QAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIKASFS 599 Query: 576 KNYNSQ 581 + +Q Sbjct: 600 RKPAAQ 605 >gi|77464645|ref|YP_354149.1| putative inner membrane protein translocase component YidC [Rhodobacter sphaeroides 2.4.1] gi|123590899|sp|Q3IYY6|OXAA_RHOS4 RecName: Full=Inner membrane protein oxaA gi|77389063|gb|ABA80248.1| protein translocase subunit yidC [Rhodobacter sphaeroides 2.4.1] Length = 623 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 215/606 (35%), Positives = 330/606 (54%), Gaps = 29/606 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 ++N N +A LS +++ W + P Q + Sbjct: 3 DQNKNLILATGLSFLVIMVWFFLFPPPEAVTEGEPTVATQQTAVAPSATPDAPTTAVPPD 62 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A L + RV + P L GSI++ G + DDL+L+ YH + S IV LLSP NAY+ Sbjct: 63 AD-LPETQRVVIDTPRLQGSISMLGGRLDDLSLKSYHETLDPQSQIVRLLSPVGQPNAYY 121 Query: 122 AELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 A + ++P +NT W + L P+ L + N ++F RTIS+D+HY+ Sbjct: 122 ALYGWTPAGALGYEDVPGANTTWTQVGSGALGVDQPVTLQWDNGKGLVFTRTISVDDHYM 181 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F + TV NNS ++ +P G + RH F V + D L E KY + + Sbjct: 182 FSVAQTVENNSGQAVQLAPYGIVARHGKPLNLQNFFVLHEGVVGRADGKLTETKYDKVAE 241 Query: 240 SSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + W+G +DKYW + IP + F S KY+ G YQA+ Sbjct: 242 LPQVAREGAQAEVIDAQQDGWIGFTDKYWMTTLIPQQGQPFTSVTKYVP-GADIYQAETR 300 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------IPRFEMLIDWGWFYF 341 +T+ PG + ++ LFAGAKE+ TI Y+ + A IP F IDWGWF+F Sbjct: 301 EQLVTVAPGATAEVSSRLFAGAKEWETIRAYQNEGATEPTEGAEPIPGFIDSIDWGWFFF 360 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + KP+F ++ + +++GN G+AI+ T +K L PLA K YVS A MK +QP+++ LRE Sbjct: 361 LTKPIFTVLHWLNHMIGNMGLAIIALTFLLKALVLPLAYKSYVSMARMKELQPELEALRE 420 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + ++Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+RHAPF+GW Sbjct: 421 RAGDDK-MLMQREMMRLYKEKQVNPAAGCLPILIQIPIFFSLYKVIFVTIELRHAPFFGW 479 Query: 462 IKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 +KDL+A DP++IF FG+ P+ P + +G PI++ +SM++Q K++P P DK Sbjct: 480 LKDLSAPDPSSIFNFFGLAPWAAPTPGTTMALIFIGALPILLGVSMWLQQKLNPAPGDKA 539 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 QAMI WMP VF+F L F +GL++YW +N+I+ QQ VIM+ HG + ++++FS Sbjct: 540 QAMIFAWMPWVFMFMLGHFASGLVLYWIVNNLITFTQQYVIMRSHGHHPDIFGNIKASFS 599 Query: 576 KNYNSQ 581 + +Q Sbjct: 600 RKPAAQ 605 >gi|84499797|ref|ZP_00998085.1| putative inner membrane protein translocase component YidC [Oceanicola batsensis HTCC2597] gi|84392941|gb|EAQ05152.1| putative inner membrane protein translocase component YidC [Oceanicola batsensis HTCC2597] Length = 608 Score = 460 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 203/608 (33%), Positives = 332/608 (54%), Gaps = 32/608 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN---------- 51 ++N N +A LS I++ W + P + N +T + Sbjct: 3 DQNKNLILATVLSFIVIVVWFLLFPPPERVDDPNAPATGETAQSQADGTAPMTPGADTRE 62 Query: 52 -SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + + +PR+ + P L GSINL+G + DDL L+ Y + +++ VT+ Sbjct: 63 GASVPSDAAPASADTEEAPRLGIDTPRLAGSINLRGGRIDDLKLKDYLTSLDADATRVTV 122 Query: 111 LSPSNTKNAYFAELDYV--STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L P + ++ ++A ++ S A+ +P +TVW++ LTP TP+ + ++N ++F Sbjct: 123 LRPEDQRDPFYALYGWIPVSGADAGAMPAEDTVWSVEGTPTLTPETPVTMTWENDAGLIF 182 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 RT+ +D Y+F + TV N + + P + RH + F V + + D Sbjct: 183 RRTVGIDTDYMFTVRQTVENTGENPVALRPYSVLRRHGIPSDLKKFFVLHEGLIRMSDGE 242 Query: 229 LVEQKYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 L E+ Y ++E + + + W G +D YW S IP T+F S KY Sbjct: 243 LQEESYGNLEDFDVDGREGVPAERIEVQESGWTGFTDHYWMSTIIPD--TAFRSTAKYFP 300 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G + +Q + I PG S + LFAGAKE+ TI Y+ D + RF IDWGWF Sbjct: 301 -GRSIFQTDAVLPAVEIAPGASASVDTRLFAGAKEWETIKEYQNDHGVTRFLDAIDWGWF 359 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +F+ KP+F ++ + + +GN G +I+ TV +K++ FPLA K Y S A M+ +QP+++++ Sbjct: 360 FFLTKPIFAVLHWLNSHIGNMGWSIIALTVLLKMVLFPLAYKSYASMAKMRELQPEMEKI 419 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E+ Q LQK M++LYK +NP +GC PILLQIP+FF++YKVI ++LE+RHAP+ Sbjct: 420 KERAGD-DRQKLQKEMMELYKKEKVNPASGCLPILLQIPIFFSLYKVIFVTLELRHAPWI 478 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 GWI DL+A DP++I LFG+LP P + +G+ PI++ +SM++Q K++P P D Sbjct: 479 GWIHDLSAPDPSSILNLFGLLPIATPDPDSFLAIISLGVLPILLGVSMWLQQKLNPAPTD 538 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 Q MI WMP VF+F L +F +GL++YW +NVI+ +QQ IM+ HG + + +R + Sbjct: 539 PTQQMIFAWMPWVFMFMLGTFASGLVLYWITNNVITFMQQYAIMRSHGFKPDVFGNIRKS 598 Query: 574 FSKNYNSQ 581 ++ ++ Sbjct: 599 LTRKKKAE 606 >gi|299132593|ref|ZP_07025788.1| membrane protein insertase [Afipia sp. 1NLS2] gi|298592730|gb|EFI52930.1| membrane protein insertase [Afipia sp. 1NLS2] Length = 611 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 264/610 (43%), Positives = 364/610 (59%), Gaps = 32/610 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE-----------------------MNNER 37 M N N +A+ LS +I+ AWQ FY P++E+ Sbjct: 1 MTDNRNTIIAVVLSGLILLAWQYFYNMPQMEKQRAAQQTQMQAANPANSSAPAATTQTPA 60 Query: 38 KNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + A + DRA+ ++ SPRV++ PSLIGSI LKGA+ DD+ Y Sbjct: 61 AGSAAPTPASPGAEQQQAAPVKDRAEVIASSPRVKIDTPSLIGSIALKGARIDDVAFVKY 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPI 156 V SP L SP+ TK Y+AE +V A + +LP +TVW LTPTTP+ Sbjct: 121 RETVDPKSPAEVLFSPTGTKAPYYAEFGFVPAAGASAKLPGLDTVWTQQGSNALTPTTPV 180 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + N ++F RT+S+DE Y+F I D V N+ P G I RH + + + Sbjct: 181 VLTYDNGEGLVFTRTLSVDEKYVFTIKDEVANSGTAPATLYPFGLISRHGLPETSGYYIL 240 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 EG I VLGDK L E Y ++++ S F SN+WLGI+DKYWA+ +P S ++F Sbjct: 241 HEGPIGVLGDKGLQEYTYKKMDETKASEFKVSNAWLGITDKYWAATLLPDPAASLTARFS 300 Query: 277 YLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 G R YQ + + +T+ G TTT LFAGAKE T+ Y+K L + RFE+LID Sbjct: 301 SKLSGTTRVYQTDYLLDPVTVQAGGHATTTTRLFAGAKEVATVDAYDKQLKLNRFELLID 360 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWFYFI KPMF + + Y L GNFG+AI+L TV VK +FFPLA K Y S A MK +QP+ Sbjct: 361 WGWFYFITKPMFWTIDHLYRLFGNFGVAILLVTVIVKAIFFPLANKSYASMAKMKAVQPQ 420 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + L+EK+ + Q+ M+ +YK INP+AGC PI +QIPVFFA+YKV+ I++EMRH Sbjct: 421 LAALKEKYPDDKVK-QQQEMMDIYKKEKINPIAGCLPIAIQIPVFFALYKVLFITIEMRH 479 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSP 509 APF+GWI DL+A DPT++F LFG+LP+ ++ +G WP+IM ++M+ QMK++P Sbjct: 480 APFFGWIHDLSAPDPTHVFNLFGLLPYDPSAVPIIGHYLAIGAWPLIMGVTMWFQMKLNP 539 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D Q MI +WMPV+F F L+SFPAGL+IYW+W+N +S++QQ+ IMK +G +I L D Sbjct: 540 APPDATQKMIFDWMPVIFTFMLASFPAGLVIYWAWNNTLSVIQQSAIMKKNGVKIELFDN 599 Query: 570 LRSTFSKNYN 579 L+STF+ Sbjct: 600 LKSTFAGGKK 609 >gi|27383209|ref|NP_774738.1| inner membrane protein translocase component YidC [Bradyrhizobium japonicum USDA 110] gi|38502983|sp|Q89BQ0|OXAA_BRAJA RecName: Full=Inner membrane protein oxaA gi|27356383|dbj|BAC53363.1| blr8098 [Bradyrhizobium japonicum USDA 110] Length = 616 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 245/616 (39%), Positives = 356/616 (57%), Gaps = 42/616 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE-----------MNNERKNIQTVK----- 44 M N N +A+ LS +++ AWQ FY P +E+ + + Sbjct: 2 MTDNRNTILAVILSGLVLIAWQYFYNVPAMEKQRAQQQAQAELQKTTPQPTASATPGATP 61 Query: 45 ------QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 QP+ A + R A++ SPRV++ P + GSI+LKG + DD+ L Y Sbjct: 62 QSGGAAQPSTPAAGQQAQPVVARDAAIAASPRVKIDTPRIAGSISLKGGRIDDVALVQYR 121 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIK 157 V SP + L SPS T Y+AE +V +LP++ T+W LTPTTP Sbjct: 122 ETVDPKSPPIVLYSPSGTAEPYYAEFGWVPATGVTAKLPDAQTLWQQDGSGSLTPTTPAV 181 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 L + N + F RTIS+D+HYLF I D V+N + P I RH + + + Sbjct: 182 LKWDNGEGLTFRRTISVDDHYLFTIKDEVSNVGNAPVTLYPFALISRHGTPQVSGYYILH 241 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 EG I L L E Y I+++ NF +N WLG++DKYWAS +P ++F Sbjct: 242 EGLIGYLD--GLQEYAYKKIDEAKSVNFKATNGWLGMTDKYWASALLPDTSAQLQARFSS 299 Query: 278 LS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH---------HYEKDLAI 327 YQ + + +T+ G S T LFAGAKE + Y K+L + Sbjct: 300 NPVGNVHTYQTDYLLDPVTVAIGGSATANARLFAGAKEAGVVGINFPLAGHGGYNKELNL 359 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 F++LIDWGWFYFI KPMF+ + +FY GNFGI+I+L TV VKLLFFPLA K Y S A Sbjct: 360 NHFDLLIDWGWFYFITKPMFLGLDFFYRFFGNFGISILLVTVIVKLLFFPLANKSYASMA 419 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 MK+IQP++ L+E++ + Q+ M+++Y+ INP+AGC P+++QIPVFF++YKV+ Sbjct: 420 KMKSIQPQLQALKERYPDDKVK-QQQEMMEIYRKEKINPVAGCLPVVIQIPVFFSLYKVL 478 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSM 501 +++EMR APF+GWIKDL+A DPTN+F LFG++P ++ +GIWPIIM ++M Sbjct: 479 FVTIEMRQAPFYGWIKDLSAPDPTNLFNLFGLIPLDPTTIPVFGHYLALGIWPIIMGITM 538 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + QMK++P P D Q MI NWMP++F F L+ FPAGL+IYW+W+N +S++QQ+ IM+ +G Sbjct: 539 WFQMKLNPTPPDPTQQMIFNWMPLIFTFMLAGFPAGLVIYWAWNNTLSVLQQSFIMRRNG 598 Query: 562 AEIGLIDRLRSTFSKN 577 ++ L D L++TF++ Sbjct: 599 VKVELFDNLKATFARK 614 >gi|209886640|ref|YP_002290497.1| inner membrane protein OxaA [Oligotropha carboxidovorans OM5] gi|209874836|gb|ACI94632.1| inner membrane protein OxaA [Oligotropha carboxidovorans OM5] Length = 610 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 257/610 (42%), Positives = 361/610 (59%), Gaps = 32/610 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------------------EMNNER 37 M N N +A+ LS +++ WQ FY P + Sbjct: 1 MTDNRNTILAVLLSGVVLLGWQYFYNEPEMARQRAAQQAQTQAANPANSAAPNATTQTPA 60 Query: 38 KNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + + DRA+ ++ SPR++++ P+LIGSI LKGA+FDD++L Y Sbjct: 61 AGSTAPTPGSPTIQQQQGAQVKDRAEVIAASPRIKIETPNLIGSIALKGARFDDVSLVKY 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPI 156 V SP L SPS TK Y+AE +V A I++P +TVW LT TTP+ Sbjct: 121 RETVDPKSPAEVLFSPSGTKAPYYAEFGFVPAAGATIKMPTLDTVWTQEGSNALTSTTPV 180 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + N + F RTIS+D+ Y+F + D V N+ P G I RH + + + Sbjct: 181 VLKYDNGEGLTFTRTISVDDKYVFTVKDDVANSGTAPTTVYPFGLISRHGVPETSGYYIL 240 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 EG I VLGD+ L E Y ++++ S F +N WLGI+DKYWA+ +P + ++F Sbjct: 241 HEGPIGVLGDQGLQEFSYKNMDEKKTSEFKVTNGWLGITDKYWAATLLPDPAAALTARFS 300 Query: 277 YLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 G R YQ + + + + G S TTT LFAGAKE T+ Y+K L + RFE+LID Sbjct: 301 SNLVGPTRIYQTDYLLDPVAVPAGGSATTTTRLFAGAKEVATVDAYDKQLKLNRFELLID 360 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 WGWFYFI KPMF + Y L GNFG+AI+L TV +K +FFPLA K Y S A MK +QP+ Sbjct: 361 WGWFYFITKPMFWAIDQLYRLFGNFGVAILLVTVAIKAVFFPLANKSYASMAKMKAVQPQ 420 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + L+EK+ + Q+ M+++YK INP+AGC PI +QIPVFFA+YKV+ I++EMRH Sbjct: 421 LTALKEKYPDDRVK-QQQEMMEIYKKEKINPIAGCLPIAIQIPVFFALYKVLFITIEMRH 479 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSP 509 APF+GWI+DL+A DPT+IF LFG+LPF ++ +G WP+IM ++M+ QMK++P Sbjct: 480 APFFGWIRDLSAPDPTHIFNLFGLLPFDPSAVPLIGTYLAIGAWPVIMGITMWFQMKLNP 539 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D Q MI +WMPVVF F L+SFPAGL+IYW+W+N++S++QQ+ IMK +G +I L D Sbjct: 540 QPPDPTQKMIFDWMPVVFTFMLASFPAGLVIYWAWNNLLSVLQQSAIMKKNGVKIELFDN 599 Query: 570 LRSTFSKNYN 579 L+S F+ Sbjct: 600 LKSMFASKKA 609 >gi|254780483|ref|YP_003064896.1| putative inner membrane protein translocase component YidC [Candidatus Liberibacter asiaticus str. psy62] gi|254040160|gb|ACT56956.1| putative inner membrane protein translocase component YidC [Candidatus Liberibacter asiaticus str. psy62] Length = 581 Score = 458 bits (1178), Expect = e-126, Method: Composition-based stats. Identities = 581/581 (100%), Positives = 581/581 (100%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD Sbjct: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY Sbjct: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF Sbjct: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS Sbjct: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK Sbjct: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF Sbjct: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK Sbjct: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL Sbjct: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII Sbjct: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ Sbjct: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 >gi|126724910|ref|ZP_01740753.1| putative inner membrane protein translocase component YidC [Rhodobacterales bacterium HTCC2150] gi|126706074|gb|EBA05164.1| putative inner membrane protein translocase component YidC [Rhodobacterales bacterium HTCC2150] Length = 620 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 216/604 (35%), Positives = 331/604 (54%), Gaps = 26/604 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN-------SYA 54 + N N +A+ALSV+++ AW F+ P E Q+ D S Sbjct: 3 DENKNLLLAMALSVMVIIAWSIFFPAPVDETPVAATSGEQSTTAGVSADAGSDVAAVSNV 62 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + R ALS + R ++ P L GSI+ G + DDL+L+ Y +++ S IVTLL+P Sbjct: 63 PTSAEVRTAALSSATRADIDTPRLSGSISTLGGRIDDLSLKDYRIELDEASDIVTLLTPE 122 Query: 115 NTKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 T++AY+A + + ++P T W + + LTP TP+ LV++N + F + I Sbjct: 123 GTQDAYYALYGWAPGGDLGWDDVPGPETQWAIEGNEKLTPETPVTLVWENTTGMTFRQII 182 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 S+D +LF + V+NN R +P +I RH T F + +S E Sbjct: 183 SVDADFLFSVQQEVSNNGSTAARLAPYSQIRRHGEPTDMKGFFILHEGAIRQSGESQKEY 242 Query: 233 KYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 YSD+ + SN WLG +D YW + IP F S +Y Sbjct: 243 DYSDLADFDRDDQWGDRSDVVDVASNGWLGFTDHYWMTALIPESAQPFKSVLQY-KAQQD 301 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y ++ +T+ G++ T T FAGAKE+ I YE + I RF IDWGWFYF+ Sbjct: 302 VYLSETRLPTLTVEAGQTNTVTTHFFAGAKEWAVIREYEANNGIYRFIDSIDWGWFYFLT 361 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F ++ ++GN G +I+ T+ +K L FPLA K YVS A MK +QP++ E++EK Sbjct: 362 KPIFWVLHSLNGIIGNMGWSIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMAEIKEKA 421 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 + +QK +++LYK +NP +GC PILLQIP+FF++YKVI +++++RHAP+ GWIK Sbjct: 422 GDDKSK-VQKEIMELYKKEKVNPASGCLPILLQIPIFFSLYKVIFVTIDLRHAPWVGWIK 480 Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+A D +++F LFGILP+ P + +G+ P+++ +SM++Q K++P P D QA Sbjct: 481 DLSAPDTSSLFNLFGILPWDSPEPGSIMALIFIGVLPLLLGISMWLQQKLNPAPTDATQA 540 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MI WMP VF+F L SF +GL++YW +N I+ QQ +IM+ G + + + S+F K Sbjct: 541 MIFAWMPWVFMFMLGSFASGLVVYWIANNTITFTQQYLIMRSQGFKPDVFGNIMSSFKKK 600 Query: 578 YNSQ 581 + Sbjct: 601 EPVK 604 >gi|86747809|ref|YP_484305.1| putative inner membrane protein translocase component YidC [Rhodopseudomonas palustris HaA2] gi|86570837|gb|ABD05394.1| protein translocase subunit yidC [Rhodopseudomonas palustris HaA2] Length = 629 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 239/620 (38%), Positives = 356/620 (57%), Gaps = 50/620 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM---------------NNERKNIQTVKQ 45 M N N +A+ LS +++ WQ F+ P++E+ ++ T Sbjct: 1 MSDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAQQAQQQQDAAKQPTQQAPAATTPG 60 Query: 46 PNQVDN-----------------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQ 88 + R A++ SPR++++ P L G+I+LKGA+ Sbjct: 61 APNAPAASAAPGAPGAPGAPAARQSGNAPVVSREAAIAASPRIKVETPRLDGTISLKGAR 120 Query: 89 FDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST-ANNIELPNSNTVWNLISG 147 DDL+L V SP + L SPS N Y+AE +V +N++LP+ NT+W Sbjct: 121 IDDLSLTQLRETVDPKSPPIHLFSPSGGANPYYAEFGWVGAAGSNVKLPDQNTMWQQQGS 180 Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 LTP++PI L + N + F R I++D+ YLF + D VTN + P I RH Sbjct: 181 GALTPSSPITLTWDNGEGLTFRRQIAVDDRYLFTVKDDVTNVGSSPVTLYPYALISRHGT 240 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 + + EG I LG+ L E Y+ I+++ F +N+W+GI+DKYWAS +P Sbjct: 241 PHVEGYYILHEGLIGYLGEHGLQEYGYAKIDEAKTVGFKATNAWMGITDKYWASALLPDT 300 Query: 268 ETSFHSQFKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPT--------- 317 ++F G R YQ + + T+ G ++T LFAGAKE Sbjct: 301 NAQLQARFSSNQVGATRTYQTDYLEDAKTVPIGGTVTANARLFAGAKEARVVGINFPFAG 360 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + Y + L + F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV +K+LF P Sbjct: 361 LGGYNQQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLIKVLFLP 420 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 LA K Y S A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC P+LLQI Sbjct: 421 LANKSYASMAKMKAIQPQLLALKERHPDDKAK-QQQEMMEIYRKEKINPVAGCLPVLLQI 479 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVG 491 PVFF++YKV+ +++EMRHAPF+GWI DL+AADPTN+F LFG+LPF ++ +G Sbjct: 480 PVFFSLYKVLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLLPFDPTAIPVLGHYLVLG 539 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 +WP++M +M+ QMK++P P D Q MI WMPV+F F L+ FPAGL+IYW+W+N++S++ Sbjct: 540 VWPLVMGFTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNLLSVI 599 Query: 552 QQAVIMKMHGAEIGLIDRLR 571 QQA IM+ +G ++ L D LR Sbjct: 600 QQAYIMRRNGVKVELFDNLR 619 >gi|222147367|ref|YP_002548324.1| putative inner membrane protein translocase component YidC [Agrobacterium vitis S4] gi|254772742|sp|B9JZK8|OXAA_AGRVS RecName: Full=Inner membrane protein oxaA gi|221734357|gb|ACM35320.1| inner membrane insertion protein [Agrobacterium vitis S4] Length = 620 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 290/618 (46%), Positives = 392/618 (63%), Gaps = 39/618 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE-------------MNNERKNIQTVKQPN 47 ME N NY +AIALSV++V WQ FY+ PRIE + Sbjct: 2 MENNRNYLIAIALSVMVVLGWQFFYMNPRIEAQRQAEQAQQAQQAKTPATQATPGAAVNG 61 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + A R A++ S RVE+ +L GSINL GA+ DDL L+GYH V SPI Sbjct: 62 ALPGQTQASATTSREDAVAKSARVEINTEALSGSINLTGARLDDLRLKGYHETVDKTSPI 121 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 +TLL+P++TK+ YFAE+ ++ + +P +TVW + G+ LT TTP+ L + N + Sbjct: 122 ITLLNPADTKDGYFAEIGFIGGEKSGSVPGPSTVWTVKDGQTLTETTPVTLTYTNETGLT 181 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 F R IS+D+HY+F I DTV N I +P GR+ R+ +T+ + EGFI V+G Sbjct: 182 FSRKISVDKHYMFTIEDTVANAGGADISLAPYGRVTRYNKPAVASTYVLHEGFIGVMGSG 241 Query: 228 SLV----EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 E KY+ IEK + +N + WLGI+DKYWA+ +P + ++ S+F + +DG A Sbjct: 242 DGKFASVEAKYAAIEKENETNAKATGGWLGITDKYWAATLVPPQSLAYDSRFSHFTDGQA 301 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE--------------------- 322 R+QA + + +TI PG+S T LFAGAKE P + Y Sbjct: 302 RFQADYKNDPVTIAPGQSTTLKTLLFAGAKEVPVVDGYALDKSWFGQAFTNLFAGAKDTV 361 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 + IPRF++LIDWGWFYF+ KPMF LM +F+ VGNFG+AI+LTT+ VKLLFFPLA KQ Sbjct: 362 QQYDIPRFDLLIDWGWFYFLTKPMFKLMDFFFRQVGNFGVAILLTTIAVKLLFFPLASKQ 421 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y S ANMK +QPK++EL+ K LQ+AM++LYKT INP+AGCWP+LLQIPVFFA Sbjct: 422 YASMANMKRMQPKMEELKAKHGD-DRMALQQAMMELYKTEKINPVAGCWPLLLQIPVFFA 480 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +YKVI I++EMRHAPF+GWI DL+A DPT+ LFG+LPF P +H+GIWPIIM ++MF Sbjct: 481 LYKVIYITIEMRHAPFFGWIHDLSAPDPTSFVNLFGLLPFESPAMLHLGIWPIIMGITMF 540 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +QM+M+P P D QAM+ NWMP+VF F L SFPAGL+IYW+W+N +S++QQ++IMK HG Sbjct: 541 VQMRMNPTPPDPTQAMLFNWMPLVFTFMLGSFPAGLVIYWAWNNTLSVLQQSIIMKRHGV 600 Query: 563 EIGLIDRLRSTFSKNYNS 580 +I L D L+ F + Sbjct: 601 KIELFDNLKGLFQRKSAK 618 >gi|217977385|ref|YP_002361532.1| 60 kDa inner membrane insertion protein [Methylocella silvestris BL2] gi|254773006|sp|B8EPG5|OXAA_METSB RecName: Full=Inner membrane protein oxaA gi|217502761|gb|ACK50170.1| 60 kDa inner membrane insertion protein [Methylocella silvestris BL2] Length = 600 Score = 457 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 242/598 (40%), Positives = 347/598 (58%), Gaps = 22/598 (3%) Query: 1 ME-RNWNYFVAIALSVIIVYAWQNFYVYPRI-----EEMNNERKNIQTVKQPNQVDNSYA 54 M + N ++AI LS +++ W + + + ++ T Q A Sbjct: 1 MNKDSRNLYLAIGLSCLVIVGWSYIFAPKQADRARLAQTQSQNAPAGTQPQSAATPQDAA 60 Query: 55 A-----VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 L RA+AL+ SPR+++ P++ GS++LKGA+ DD++L+GY V NSP + Sbjct: 61 NFSPLDALPKTRAEALAASPRLKIDTPAIFGSLSLKGARLDDVSLKGYRETVDPNSPNIV 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 LLSP +AY+AE +V + LTP P+ L + N ++F Sbjct: 121 LLSPQGAPDAYYAEAGFVPAPGEAVAVPRSDTVWTADRDALTPEAPVTLTYDNGQGLVFH 180 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 R I++D+ ++F I D+V N S + + + RH N + EGF+ V+GD + Sbjct: 181 RQIAVDDRFMFTIKDSVENKSAKPVTLASYALVARHGLPKTVNYAVLHEGFVGVIGDAGV 240 Query: 230 VEQKYSDIEKSS--ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK--YLSDGHARY 285 E Y IEK F + WLG +DKYWA+ IP + ++F G Y Sbjct: 241 QEFHYDKIEKEDHGYKTFSGAGGWLGFTDKYWAATVIPDQAAPIEARFSANSTPSGIKTY 300 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 +A F TI PG + + +FAGAKE T+ Y+ DL I +FE+LIDWGWFYFI +P Sbjct: 301 RADFVGPVQTIAPGATTEAMSRVFAGAKEVHTLDAYQADLGIKKFELLIDWGWFYFITRP 360 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 MF L+ + Y+L GNFG+AI+L TV VK LFFPLA K Y+S A MK + P+I LREK+ + Sbjct: 361 MFRLLHFLYSLTGNFGVAILLATVIVKGLFFPLANKSYLSMAKMKAVAPEIAALREKYPE 420 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + Q+ + LYK INP++GC P+L+QIPVFFA+YKV+ +++EMRHAPF+GWI DL Sbjct: 421 DKMK-QQQETMALYKREKINPVSGCLPMLIQIPVFFALYKVLFVTIEMRHAPFFGWIHDL 479 Query: 466 AAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 +A DPTN+F LFG+LPF F+ +G+WP++M +SMF+QMK +P PAD Q I Sbjct: 480 SAPDPTNLFNLFGLLPFDPTQLPLIGHFLAIGVWPLLMGVSMFVQMKANPEPADPMQKQI 539 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 WMPV+F F L FP GL+IYW+W+N++S+ QQ +IMK G ++ L D L S F K Sbjct: 540 FTWMPVIFTFTLGGFPVGLVIYWTWNNILSVSQQTLIMKRAGVKVELFDNLASLFRKK 597 >gi|148258511|ref|YP_001243096.1| putative inner membrane protein translocase component YidC [Bradyrhizobium sp. BTAi1] gi|146410684|gb|ABQ39190.1| protein translocase subunit yidC [Bradyrhizobium sp. BTAi1] Length = 621 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 256/620 (41%), Positives = 367/620 (59%), Gaps = 44/620 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK-----------NIQTVKQPNQV 49 M N N +A+ LS +++ WQ FY P++E+ + + +Q P+ Sbjct: 1 MTDNRNTILAVILSGLVLILWQVFYNGPQMEKQRAQAQMQAELAKKQAPAVQPEATPSAT 60 Query: 50 DNSYAAVL---------------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 AA + R A++ +PRV++ P L GSI+LKGA+ DDL Sbjct: 61 PQPNAAASGSPSAPGGAATTATGVVARDAAIAATPRVKIDTPRLSGSISLKGARIDDLAF 120 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS-TANNIELPNSNTVWNLISGKILTPT 153 Y V SP + L SPSNT Y+AE +V +++P+ NTVW LTPT Sbjct: 121 VQYRETVDPKSPAIVLFSPSNTAEPYYAEFGWVGAPGAKVQVPDQNTVWQQDGTNALTPT 180 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 TP+KL NA+ + F+RTIS+DEHYLF I D VTN + P G I RH + Sbjct: 181 TPVKLSTTNADGLTFKRTISVDEHYLFTIKDEVTNAGSAPVTLYPFGLISRHGTPHVSGY 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + + EG I LG+K L E Y ++ + F +N WLGI+DKYWA+ +P + + Sbjct: 241 YILHEGLIGYLGEKGLQEYTYKKMDDDKAAKFDVTNGWLGITDKYWATALLPMTDARLTA 300 Query: 274 QFKYL-SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYEK 323 + D RYQ + T+ G + + + LFAGAKE + Y + Sbjct: 301 NYSSKLVDNQHRYQTDYVETPQTVPAGGAASVSTRLFAGAKEAGVVGINFPIGGLGGYNQ 360 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 L + F++LIDWGWFYF+ KPMF+ + +F+ GNFGI+I+L TV VKLLFFPLA K Y Sbjct: 361 QLGLNHFDLLIDWGWFYFLTKPMFLALDFFFRFFGNFGISILLVTVLVKLLFFPLANKSY 420 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S A MK IQP++ L+E++ + Q+ M+++YK INP+AGC P++LQIPVFF++ Sbjct: 421 ASMAKMKAIQPQLQALKERYPDDRMK-QQQEMMEIYKKEKINPVAGCLPVVLQIPVFFSL 479 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIM 497 YKV+ +++EMRHAPF+GWIKDL+A DPTN+FTLFG++PF ++ +GIWPIIM Sbjct: 480 YKVLFVTIEMRHAPFYGWIKDLSAPDPTNLFTLFGLIPFDPTQLPLFGHYLALGIWPIIM 539 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++M++QMK++P P D QAMI NWMP++F F L+ FPAGL+IYW+W+N +S++QQ IM Sbjct: 540 GITMWVQMKLNPAPPDPTQAMIFNWMPIIFTFMLAGFPAGLVIYWAWNNTLSVLQQGFIM 599 Query: 558 KMHGAEIGLIDRLRSTFSKN 577 + +G ++ L D +R TF K Sbjct: 600 RRNGVKVELFDNIRGTFKKK 619 >gi|325291817|ref|YP_004277681.1| inner membrane protein translocase component YidC [Agrobacterium sp. H13-3] gi|325059670|gb|ADY63361.1| putative inner membrane protein translocase component YidC [Agrobacterium sp. H13-3] Length = 600 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 285/596 (47%), Positives = 398/596 (66%), Gaps = 19/596 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME+N NYF+AIALSV+IV AWQ Y+ PRIE+ + Q +Q Q + A Sbjct: 2 MEKNRNYFIAIALSVVIVLAWQFLYMNPRIEQQRRAEEARQAQQQTTQQQPAPGAAPGVT 61 Query: 61 RAQA-----------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 A ++ S RV + ++ GSINL GA+FDD+ L+GYH V Sbjct: 62 ADGAPPASSTQAAATATREEAIAKSQRVAIDTNAIAGSINLTGARFDDIRLKGYHETVDD 121 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +SPI+TL SPS+TK+ YF EL YV A+ +P TVW L SG LT TTP+ L + N Sbjct: 122 SSPIITLFSPSDTKDGYFTELGYVGGADAGSVPGPATVWTLASGDKLTETTPVTLKYTNQ 181 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 N ++F RT+S+D+HY+ + D V N + F+ GR+ R+ F + EGF+ V Sbjct: 182 NGVVFSRTVSIDQHYMITVNDKVENPGQAPVSFATYGRVTRNNKPAIPPVFVIHEGFLGV 241 Query: 224 LGDK-SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 G SL E+KY D+E++ ++ + WLGI+DKYWA+ +P + T F +++ ++ Sbjct: 242 SGKDGSLTEEKYKDVEETPVTIAKATGGWLGITDKYWAAAIVPPQMTPFETRYSHIKGNQ 301 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQA F ++ +T+ PG+SI + +FAGAKE P + YE + +IP+F++LIDWGWFYFI Sbjct: 302 PSYQADFKSDTMTVEPGQSIELKSLVFAGAKEVPLVDRYETEYSIPKFDLLIDWGWFYFI 361 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KPMF +M +F+ GNFG+AI+LTT+ VK LFFPLA KQY S ANMK +QPK++EL+ K Sbjct: 362 TKPMFKMMDFFFRYFGNFGVAILLTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAK 421 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +Q+AM+QLYK INP+AGCWP+LLQIPVFFA+YKVI +++EMRHAPF+GWI Sbjct: 422 HGD-DRMAMQQAMMQLYKEEKINPVAGCWPMLLQIPVFFALYKVIYVTIEMRHAPFFGWI 480 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+A DPT++F LFG+LP+ +P F+ +G+WP++M ++MF+QM+M+P P D QAMI W Sbjct: 481 HDLSAPDPTSLFNLFGLLPYDVPHFLMIGVWPLVMGITMFLQMRMNPTPPDPTQAMIFTW 540 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 MP++F F L+SFPAGL+IYW+W+N +SI QQA+IMK HGA+I L D L+ F + Sbjct: 541 MPLIFTFMLASFPAGLVIYWAWNNTLSISQQALIMKRHGAKIELFDNLKGLFKRKP 596 >gi|91974551|ref|YP_567210.1| putative inner membrane protein translocase component YidC [Rhodopseudomonas palustris BisB5] gi|91681007|gb|ABE37309.1| protein translocase subunit yidC [Rhodopseudomonas palustris BisB5] Length = 621 Score = 455 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 242/621 (38%), Positives = 362/621 (58%), Gaps = 42/621 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL--- 57 M N N +A+ LS +++ WQ F+ P++E+ ++ Q + Q A Sbjct: 1 MTDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAQQAQQQQEAAKQQTPPAATTPGAP 60 Query: 58 ---------------------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 + R A++ SPR++++ P L G+++LKGA+ DDL+L Sbjct: 61 NAPAAPGAPGAPANQPAANAPVVSRDAAIAASPRIKVETPRLDGTLSLKGARIDDLSLSQ 120 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST-ANNIELPNSNTVWNLISGKILTPTTP 155 YH V S + L SPS + N Y+AE +V +N++LP+ NT+W LTP P Sbjct: 121 YHETVDPKSAPIHLFSPSGSANPYYAEFGWVGAAGSNVKLPDQNTLWEQEGSGALTPANP 180 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + L + N + F R I++D+ YLF I D VTN + P I RH + Sbjct: 181 VTLKWDNGEGLTFRRQIAVDDRYLFTIKDDVTNVGGGPVTLYPFALISRHGTPHVEGFYI 240 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 + EG I LG++ L E Y+ I+++ F +N+W+GI+DKYWAS +P ++F Sbjct: 241 LHEGLIGYLGEQGLQEYGYAKIDEAKTVGFKATNAWMGITDKYWASALLPDTNAQLQARF 300 Query: 276 KYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPT---------IHHYEKDL 325 G R YQ + + T+ G + T T LFAGAKE + Y + L Sbjct: 301 SSNQVGATRTYQTDYLEDAKTVPIGGTATATARLFAGAKEARVVGINFPFAGLGGYNQQL 360 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 + F++LIDWGWFYFI KPMF+ + +F++LVGNFG+AI+L TV VKL+F PLA K Y S Sbjct: 361 GLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLIFLPLANKSYAS 420 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A MK IQP++ L+E+ + Q+ M+++Y+ INP+AGC P+LLQIPVFF++YK Sbjct: 421 MAKMKAIQPQLLALKERHPDDKAK-QQQEMMEIYRKEKINPVAGCLPVLLQIPVFFSLYK 479 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSL 499 V+ +++EMRHAPF+GWI DL+AADPTN+F LFG++P+ ++ +G+WP++M Sbjct: 480 VLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLIPYDPSTLPVIGSYLVLGVWPLVMGF 539 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +M+ QMK++P P D Q MI WMPV+F F L+ FPAGL+IYW+W+N +S++QQA IM+ Sbjct: 540 TMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVIQQAYIMRR 599 Query: 560 HGAEIGLIDRLRSTFSKNYNS 580 +G ++ L D L+S K + Sbjct: 600 NGVKVELWDNLKSAVVKPKKT 620 >gi|260432492|ref|ZP_05786463.1| inner membrane protein OxaA [Silicibacter lacuscaerulensis ITI-1157] gi|260416320|gb|EEX09579.1| inner membrane protein OxaA [Silicibacter lacuscaerulensis ITI-1157] Length = 609 Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 217/609 (35%), Positives = 336/609 (55%), Gaps = 33/609 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA------ 55 ++N N +A ALS +++ W + P + ++ T Q N+ Sbjct: 3 DQNKNLILATALSFLVILVWFVLFPPPEPTTLQDQTAISATEGDEIQTPNAAEPSVVGDA 62 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 AQ +S PRVE+ P L GS++L G + D+L L+ Y + + ++PIV LLSP Sbjct: 63 ATEATEAQPVSDVPRVEIDTPRLTGSLSLSGGRVDELYLKDYKVSLEDDAPIVELLSPVG 122 Query: 116 TKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + +AY+A + A ++P NT+WN+ SG+ L +P+ L + N N + F RTI+ Sbjct: 123 SDSAYYALYGWAPGAGLSGADVPGPNTLWNIESGETLGVDSPVTLKWDNGNGLTFRRTIA 182 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP------QTATNTFGVQEGFIAVLGDK 227 +DE Y+F + +V N + +I +P G + RH N F + EG I + Sbjct: 183 VDEDYMFTVTQSVENATQAEIGMAPYGILARHGMGEDGDLPGLKNFFILHEGVIGMAD-G 241 Query: 228 SLVEQKYSDIEKSSISNFHE---------SNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 +L E KY D+ I N W+G +D YW + IP + F + KY Sbjct: 242 TLTEVKYDDVRDFDIDPNERAQAEVYQVKENGWIGFTDHYWMTTLIPEPGSPFKAAAKY- 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 YQ + +T+ PG++ LFAGAKE+ TI Y+ + +F IDWGW Sbjct: 301 DSRRKIYQTETVLPTLTVAPGETAQVKTRLFAGAKEWETIREYQAQ-GVQKFIDSIDWGW 359 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+F+ KP+F L+ L+GN G +I+ T+ +K + FPLA K YVS A MK +QP+++ Sbjct: 360 FFFLTKPIFWLLHNINALIGNMGWSIIGLTLIIKAILFPLAFKSYVSMAKMKELQPQMEA 419 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+E Q +Q+ M++LYK +NP AGC PILLQIP+FF++YKVI +++E+RHAP+ Sbjct: 420 LKEAAGD-DRQKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPW 478 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +G +DL+A DPT+I LFG+LP+ P + +GI P+++ +SM++Q K++P P Sbjct: 479 FGPFRDLSAPDPTSIMNLFGLLPWAGPEPGTLMATIFIGILPLLLGISMWLQQKLNPAPT 538 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QAMI WMP VF+F L SF +GL+IYW +N I+ QQ +IM+ G + + + S Sbjct: 539 DPTQAMIFAWMPWVFMFMLGSFASGLVIYWIANNTITFTQQYLIMRSQGYKPDVFGNIMS 598 Query: 573 TFSKNYNSQ 581 +F + + Sbjct: 599 SFKRTPKTD 607 >gi|159184283|ref|NP_353415.2| putative inner membrane protein translocase component YidC [Agrobacterium tumefaciens str. C58] gi|38503098|sp|Q8UIB3|OXAA_AGRT5 RecName: Full=Inner membrane protein oxaA gi|159139609|gb|AAK86200.2| preprotein translocase 60 kD membrane subunit [Agrobacterium tumefaciens str. C58] Length = 599 Score = 454 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 281/596 (47%), Positives = 396/596 (66%), Gaps = 19/596 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME+N NYF+AIALSV+IV AWQ Y+ PRIE+ + Q +Q Q + A Sbjct: 1 MEKNRNYFIAIALSVVIVLAWQFLYMNPRIEQQRRAEEARQAQQQTTQQQPAPGAAPGAT 60 Query: 61 RAQA-----------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 A ++ + RV + ++ GSINL GA+FDD+ L+GYH V Sbjct: 61 VEGAPPASSTQAAATATREEAIARTQRVAIDTNAIAGSINLTGARFDDIRLKGYHETVDD 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +SPI+TL SP++TK+ YF EL YV+ +P TVW L SG LT TTP+ L + N+ Sbjct: 121 SSPIITLFSPADTKDGYFTELGYVAAQEVGGVPGPTTVWTLASGDKLTETTPVTLTYTNS 180 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 ++F RT+S+DEHY+ I D V N I F+ GR+ R+ F + EGF+ V Sbjct: 181 KGVVFSRTVSIDEHYMLSIADKVENPGQAAISFATYGRVTRNNKPVIPPVFVIHEGFLGV 240 Query: 224 LGDK-SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 G SL E+KY D+E+ ++ + WLGI+DKYWA+ +P + T F +++ +++ Sbjct: 241 SGKDGSLTEKKYKDVEEEPVTVAKATGGWLGITDKYWAAAIVPPQTTPFETRYSHITGNQ 300 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQA F ++ +T+ G+SI + +FAGAKE P + YE + ++P+F++LIDWGWFYFI Sbjct: 301 PSYQADFKSDSMTVEAGQSIELKSLVFAGAKEVPLVDRYETEYSVPKFDLLIDWGWFYFI 360 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KPMF +M +F+ GNFG+AI+LTT+ VK LFFPLA KQY S ANMK +QPK++EL+ K Sbjct: 361 TKPMFKMMDFFFRYFGNFGVAILLTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAK 420 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +Q+AM+QLYK INP+AGCWP+LLQIPVFFA+YKVI +++EMRHAPF+GWI Sbjct: 421 HGD-DRMAMQQAMMQLYKEEKINPVAGCWPMLLQIPVFFALYKVIYVTIEMRHAPFFGWI 479 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+A DPT++F LFG+LP+ +P F+ +G+WP++M ++MF+QM+M+P P D QAMI W Sbjct: 480 HDLSAPDPTSLFNLFGLLPYDVPHFLMIGVWPLVMGITMFLQMRMNPTPPDPTQAMIFTW 539 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 MP++F F L+SFPAGL+IYW+W+N +SI QQA+IMK HGA+I L D ++ F + Sbjct: 540 MPLIFTFMLASFPAGLVIYWAWNNTLSISQQALIMKRHGAKIELFDNIKGLFKRKP 595 >gi|115522671|ref|YP_779582.1| putative inner membrane protein translocase component YidC [Rhodopseudomonas palustris BisA53] gi|115516618|gb|ABJ04602.1| protein translocase subunit yidC [Rhodopseudomonas palustris BisA53] Length = 626 Score = 454 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 243/616 (39%), Positives = 362/616 (58%), Gaps = 47/616 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM--------NNERKNIQTVKQPNQVDNS 52 M N N +A+ LS +++ WQ F+ P++E+ + +Q QPN + Sbjct: 1 MTDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAEMAARSQATSQVQPTAQPNAQPGA 60 Query: 53 YAAVL----------------------IDDRAQALSMSPRVELKNPSLIGSINLKGAQFD 90 A R AL+ SPRV+++ P L GSI+LKGA+ D Sbjct: 61 SGAQPGVPAPQAGTPTPNAAAPAAVTPTVSRDAALAASPRVKIETPRLSGSISLKGARLD 120 Query: 91 DLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST-ANNIELPNSNTVWNLISGKI 149 D+ L + V SP + L SPS +K+ Y+AE +V+ N+++P+ NTVW Sbjct: 121 DIALVQFRETVDPKSPAIELFSPSGSKHPYYAESGWVAAVGTNVKVPDQNTVWTQEGSNS 180 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209 LTPT+P+ L + N + F RTI++DE YLF + D V+N + P I RH Sbjct: 181 LTPTSPVVLRYDNGEGLTFRRTIAVDERYLFTMKDEVSNIGNAPVTLYPFALISRHGAPQ 240 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 + + EG + LG++ L E Y+ I+++ NF +N WLGI+DKYWAS +P Sbjct: 241 VAGYYILHEGLVGYLGEQGLQEYGYAKIDEAKAVNFKVTNGWLGITDKYWASALLPDTTA 300 Query: 270 SFHSQFKYL-SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH--------H 320 ++F ++ YQ + + + G + + LFAGAKE + Sbjct: 301 QLQARFSSNLANNVRTYQTDYLLDPQVVPIGGTGSANTRLFAGAKEAGVVGIGFPLGFGG 360 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 Y K L + F++LIDWGWFYFI KPMF+ + +FY+LVGNFG++I+ TV +KLLF PLA Sbjct: 361 YNKQLDLNHFDLLIDWGWFYFITKPMFVALDFFYHLVGNFGLSILFVTVIIKLLFLPLAN 420 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 K Y S A MK IQP++ L+++ + Q+ M+++Y+ INP+AGC P+LLQIPVF Sbjct: 421 KSYASMAKMKAIQPQLQALKDRHPDDKAK-QQQEMMEIYRKEKINPVAGCLPVLLQIPVF 479 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWP 494 F++YKV+ +++EMRHAPF+GWI DL+AADPTNIF LFG++P+ ++ +GIWP Sbjct: 480 FSLYKVLFVTIEMRHAPFYGWIHDLSAADPTNIFNLFGLIPYDPTQIPVLGYYLVLGIWP 539 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 IIM ++M++QMK++P P D Q MI WMP++F F L+SFPAGL+IYW+W+N++S++QQ Sbjct: 540 IIMGITMWVQMKLNPAPPDPTQQMIFAWMPLLFTFMLASFPAGLVIYWAWNNLLSVIQQG 599 Query: 555 VIMKMHGAEIGLIDRL 570 IM+ +G ++ L D L Sbjct: 600 YIMRKNGVKVELFDNL 615 >gi|126737055|ref|ZP_01752790.1| putative inner membrane protein translocase component YidC [Roseobacter sp. SK209-2-6] gi|126721640|gb|EBA18343.1| putative inner membrane protein translocase component YidC [Roseobacter sp. SK209-2-6] Length = 601 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 217/601 (36%), Positives = 330/601 (54%), Gaps = 24/601 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPR----IEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ++N N +A LS +++ W F+ P ++ E D + A Sbjct: 3 DQNKNLILATVLSFLVILGWYTFFPPPEPEQPVDVAVTENAAESGTTLVPTADATDAVAN 62 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + +PR+ + P + GSI L+G + DDL+L+ Y ++ SPIV LL P Sbjct: 63 ATTEEASAPDAPRLAIDTPRVTGSIALQGGRIDDLSLKDYRETLADGSPIVKLLKPVGEA 122 Query: 118 NAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 AY+A + A + ++P +N++W+ +G L+P TP+ L + N N + F RTIS+D Sbjct: 123 QAYYALYGWAPGAGLTSSDVPGANSIWSAPAGATLSPETPVTLTWDNGNGLTFARTISVD 182 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 E Y+F + +VTN + I +P G + RH F + + + D L E YS Sbjct: 183 EDYMFSVTQSVTNATDGTISLAPYGTLARHGEPEDLKNFFILHEGVVGMADGELSELDYS 242 Query: 236 DIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 D+ I +N W+G +D YW S IP F S K+ + YQ Sbjct: 243 DVADFDIDPRDGSRSEVKQVTTNGWIGFTDHYWMSTLIPEPGQGFRSIAKF-DERRGIYQ 301 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 +++ G S T LFAGAKE+ +I YEK I F IDWGWF+F+ KPM Sbjct: 302 TDIVLPTVSLAAGNSTEVTTMLFAGAKEWASIRSYEKS-GIAGFLDSIDWGWFFFLTKPM 360 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F ++ + L+GN G AI+ TV +K++ FPLA K Y S A MK +QP++++L+E+ Sbjct: 361 FAVLHWLNLLIGNMGWAIIGLTVLIKIIVFPLAYKSYASMAKMKELQPEMEKLKERTGD- 419 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q +QK M++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G +DL+ Sbjct: 420 DRQKMQKEMMELYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQDLS 479 Query: 467 AADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 A DPT++ LFG+LPF P + +GI P+++ +SM++Q K++P P D Q MI Sbjct: 480 APDPTSLMNLFGLLPFSGPEAGSILALVFIGILPLLLGISMWLQQKLNPAPTDPTQQMIF 539 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG + + ++S F K S Sbjct: 540 AWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSGFKKKPKS 599 Query: 581 Q 581 + Sbjct: 600 E 600 >gi|260427287|ref|ZP_05781266.1| inner membrane protein OxaA [Citreicella sp. SE45] gi|260421779|gb|EEX15030.1| inner membrane protein OxaA [Citreicella sp. SE45] Length = 607 Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats. Identities = 202/604 (33%), Positives = 324/604 (53%), Gaps = 27/604 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-------PNQVDNSYA 54 ++N N +A LS +++ W + P ++ + + Sbjct: 3 DQNKNLLIATGLSFVVILIWFLLFPPPEEPAVDQQEPVATAPVEGDAATTPSTATPTEGT 62 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + +PR+ + L GSI+L G + D+L L+ Y + + +SP V +L P Sbjct: 63 EGTATAPQAETADAPRLPIDTARLGGSISLTGGRIDELILKDYTVTIDEDSPKVQILEPV 122 Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 T +AY+A + ++P +NT W + SG LT +P+ L + + + F RT+ Sbjct: 123 GTGHAYYALYGWAPGNGLEPADVPGANTEWQVESGSSLTVDSPVTLRWDSPAGLTFRRTV 182 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 ++D++++F + +V N + +P G + RH F V + + D L E Sbjct: 183 AVDKNFMFTVTQSVENTGEASVSAAPYGIVARHGEPVGRKKFFVLHEGVVAMADGKLNEI 242 Query: 233 KYSDIEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 YSD+ + N W+G +D YW + IPS+ T+F KY +G Sbjct: 243 DYSDMPDMDMVASEGARADVTQVAENGWIGFTDHYWMTTLIPSQGTAFKQVAKY-DEGRD 301 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 YQ + +T+ PG++ T L+AGAKE+ TI Y +D + RF IDWGWF+F+ Sbjct: 302 IYQTEAVLPTVTLAPGETQQVTTQLYAGAKEYETIRGY-EDAGVDRFIDSIDWGWFFFLT 360 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ + + L+GN G +I+ T+ +K + FPLA K YVS A MK +QP++++L+E+ Sbjct: 361 KPIFWLLHHLHGLIGNMGWSIIALTITLKAILFPLAFKSYVSMAKMKELQPEMEKLKERA 420 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q LQ+ M+QLYK +NP +GC PILLQIP+FF++YKVI ++ E+R AP++G + Sbjct: 421 GD-DRQKLQQEMMQLYKKEKVNPASGCLPILLQIPIFFSLYKVIFVAFELRQAPWFGPFQ 479 Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+ DPT+++ LFG+LP+ P + VGI PI++ +SMF+Q K++P PAD Q Sbjct: 480 DLSTPDPTSLYNLFGLLPWAAPEPGSTLALIFVGILPILLGISMFLQQKLNPAPADPTQK 539 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + ++S F K Sbjct: 540 MIFAWMPWVFMFMLGGFASGLVVYWITNNTITFTQQYLIMRSQGYTPDVFGNIKSGFKKT 599 Query: 578 YNSQ 581 Sbjct: 600 PKDD 603 >gi|86135820|ref|ZP_01054399.1| putative inner membrane protein translocase component YidC [Roseobacter sp. MED193] gi|85826694|gb|EAQ46890.1| putative inner membrane protein translocase component YidC [Roseobacter sp. MED193] Length = 602 Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats. Identities = 209/602 (34%), Positives = 329/602 (54%), Gaps = 26/602 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-----PNQVDNSYAAV 56 ++N N +AIALS +++ W F+ P + P+ + AA Sbjct: 3 DQNKNLILAIALSSLVLLGWMYFFPPPEVTPAPEAVATETAPADGTASSPSAAVAADAAT 62 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + S +PR+ +++ + GSI+L+G + DDL L+ Y + + IV LSP Sbjct: 63 SQPSEEASASDAPRISIESDRITGSISLQGGRIDDLALKDYRITNDAPE-IVQFLSPVGQ 121 Query: 117 KNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 ++AY+A + + ++P +NT+W + LTP + + L + N + F RTI++ Sbjct: 122 QDAYYALYGWAPGSGLGAEDVPGANTLWTAPADAELTPDSSVTLTWDNGKGLTFNRTIAV 181 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 DE Y+F I +VTN S + +P G + RH F + + + D L E Y Sbjct: 182 DEDYMFAITQSVTNASGGAVSLAPYGTLARHGEPADMKNFFILHEGVVGMADGELAELDY 241 Query: 235 SDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 SD+ + S+ W+G +D YW S IP+ +F S KY + Y Sbjct: 242 SDVADFDVDPRDGSRSEVKQVASDGWIGFTDHYWMSTLIPAPGQAFRSSVKY-DERRDIY 300 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 Q +T+ G++ T LF+GAKE+ TI YEK I F IDWGWF+F+ KP Sbjct: 301 QTDVVLPTMTLADGETSEVTTQLFSGAKEWATIRAYEKG-GIAGFLDSIDWGWFFFLTKP 359 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F ++ + L+GN G AI+ TV +K++ FPLA K Y S A MK +QP++++L+E+ Sbjct: 360 IFAVLHWLNALIGNMGWAIIALTVLIKIIVFPLAYKSYASMAKMKELQPEMEKLKERAGD 419 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q QK +++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G +DL Sbjct: 420 -DRQKQQKEIMELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQDL 478 Query: 466 AAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 +A DPT+I LFG+LPF P + +GI P+++ +SM++Q K++P P D Q MI Sbjct: 479 SAPDPTSIMNLFGLLPFAGPTPDSIMALVFIGILPLLLGISMWLQQKLNPAPTDPTQQMI 538 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG + ++++ + Sbjct: 539 FAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYTPDVFGNIKASVKRKPK 598 Query: 580 SQ 581 + Sbjct: 599 TD 600 >gi|23015970|ref|ZP_00055732.1| COG0706: Preprotein translocase subunit YidC [Magnetospirillum magnetotacticum MS-1] Length = 578 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 214/580 (36%), Positives = 328/580 (56%), Gaps = 19/580 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE----------------EMNNERKNIQTVK 44 M N FVAIA+SV I+ WQ F+ + N + Sbjct: 1 MNDQRNLFVAIAISVAILIGWQYFFPTAKPPVEQAAQQQAAEVKASAPANVPSPATASSP 60 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + AA R +AL S R+ ++ PS+ GSI L GA+ DD+ L Y +++ Sbjct: 61 AQVPGTPAAAAQTGASRNEALGKSRRIAIQTPSMHGSIALTGARIDDITLVKYRETPAAD 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 S + L+SP+ + Y+AE +V+T N+++P +VW LT +P+ L + N Sbjct: 121 SAEIDLMSPAESPEPYWAEFGWVATDANVKVPGPESVWQAQGTGPLTQASPVVLTWDNGE 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RT ++DE+Y+F + V N P + R + + EG + V Sbjct: 181 GLRFVRTYTVDENYMFGVTQRVENYGTKAASLHPYALLARTGTPHVAGMYILHEGPLGVF 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHA 283 +L E KY D++K + + + W GI+DKYW + +P +T +F + Sbjct: 241 D-GTLKEMKYDDLKKEGSARYKTTGGWAGITDKYWLTALVPPAKTEITGRFVHQRLGNAD 299 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 RYQ + A I GK+ LF GAK+ + Y + I RF++ ID+GWFYF+ Sbjct: 300 RYQVDYLAPARVIEAGKTEEAGFHLFTGAKQVSLLDGYGEKFGIDRFDLAIDFGWFYFLT 359 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP F L+ ++ +GN G+AI+ TV +KL FPLA K YV+ MK +QPK+ EL+ ++ Sbjct: 360 KPFFYLLQMLHSALGNMGLAILALTVILKLAMFPLANKSYVAMGKMKKLQPKVQELQARY 419 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 LQ+ M+ LYK +NP++GC PI++QIPVFFA+YKV+ +++EMRHAPF+GWI Sbjct: 420 ADDK-MRLQQEMMALYKAEKVNPVSGCLPIMVQIPVFFALYKVLFVTIEMRHAPFYGWIS 478 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+A DPTNIFTLFG++P+ P MH+G+WP+IM ++M++Q K++P P D QA ++ ++ Sbjct: 479 DLSAQDPTNIFTLFGLIPWTPPHIMHLGVWPLIMGITMYLQQKLNPQPTDPVQAKMMQFL 538 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P++F F L++F +GL+IYW+WSN +SI+QQ VIMK + Sbjct: 539 PLIFTFLLANFASGLVIYWAWSNTLSILQQWVIMKRAEEK 578 >gi|163745583|ref|ZP_02152943.1| putative inner membrane protein translocase component YidC [Oceanibulbus indolifex HEL-45] gi|161382401|gb|EDQ06810.1| putative inner membrane protein translocase component YidC [Oceanibulbus indolifex HEL-45] Length = 623 Score = 450 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 203/611 (33%), Positives = 326/611 (53%), Gaps = 33/611 (5%) Query: 1 MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ N N +A ALS ++ W + P + + + V S A Sbjct: 1 MDEQNKNLILATALSFAVILVWFLLFPPPEADPALENSVEMSQAEDGTSVPASPADTAAA 60 Query: 60 D------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 R AL+ +PRV + + GSI+L G + DDL L Y + N+ + Sbjct: 61 PGTDNGEGAAPQGRRAALADAPRVAIATDKVSGSISLMGGRIDDLKLNDYQTTLDENAEV 120 Query: 108 VTLLSPSNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 VTLLSP + +AY+A + + + +P +T+W L G+ L +P+ L + N Sbjct: 121 VTLLSPEGSSDAYYALHGWAAGSGLAPDAVPGVDTLWTLSEGETLGVDSPVTLSWDNGAG 180 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 +F RTIS+D Y+F I +VTNN + +P G I +H +F + + Sbjct: 181 QIFNRTISVDNEYMFDITQSVTNNGDAPVNLAPFGMIAQHGLPEDLKSFFILHEGAVSMA 240 Query: 226 DKSLVEQKYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFK 276 + L E + DI ++ +++ + W+G +D YW +V IP +F Sbjct: 241 NGELSEIDWDDIAEADVNSTWGRPAVVTEGVTEGWVGFTDHYWQAVLIPGAGEAFEQALT 300 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 Y Y+A ++ G+S+++++ FAGAKE+ T+ Y+ + +F IDW Sbjct: 301 Y-DPRADTYRAFTRQPTRSVAAGESVSSSSKFFAGAKEWETLQDYQSA-GVAKFIDSIDW 358 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GWF+F+ KP+F L+ L+GN G+AI+ T+ +K L FPLA K YVS A MK +QP++ Sbjct: 359 GWFFFLTKPIFWLLHNLNQLIGNMGVAIIGLTLLIKALLFPLAYKSYVSMARMKELQPEM 418 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++L+ K Q +Q+ M++LYK + +NP AGC PIL+QIP+FF++YKVI +++E+RHA Sbjct: 419 EKLK-KEAGDDRQKMQQGMMELYKKNKVNPAAGCLPILMQIPIFFSLYKVIFVTIELRHA 477 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPP 510 PF+G +DL++ DPT+I L+G+LP+ P + +GI P+++ +SMF+Q K++P Sbjct: 478 PFFGPFQDLSSPDPTSIMNLWGLLPYAAPEPGSMLALVFIGILPLLLGISMFLQQKLNPA 537 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D Q MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + L + Sbjct: 538 PTDPTQQMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDLWGNI 597 Query: 571 RSTFSKNYNSQ 581 F + Sbjct: 598 AGGFKRTPKGD 608 >gi|110678771|ref|YP_681778.1| putative inner membrane protein translocase component YidC [Roseobacter denitrificans OCh 114] gi|123172722|sp|Q16AA1|OXAA_ROSDO RecName: Full=Inner membrane protein oxaA gi|109454887|gb|ABG31092.1| inner membrane protein oxaA, putative [Roseobacter denitrificans OCh 114] Length = 606 Score = 448 bits (1152), Expect = e-123, Method: Composition-based stats. Identities = 214/605 (35%), Positives = 333/605 (55%), Gaps = 28/605 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ------PNQVDNSYAA 55 ++N N +A ALS I++ W + P E + + P+ ++ + Sbjct: 3 DQNKNLILATALSFIVILVWFVLFPPPEPEMPLTGETSTELTPDAATGSLPSVTSDTAPS 62 Query: 56 VLID--DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 V+I+ R+ AL +PRVE+ + GSI+L G + DDL+L+ Y ++ IVT+LSP Sbjct: 63 VVIEGETRSAALEQAPRVEIATDRVKGSISLLGGRIDDLSLKDYRETQEEDADIVTMLSP 122 Query: 114 SNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + AY+A + + A ++P +T W +I G IL+ P+ L + N + F R Sbjct: 123 VGSPGAYYALYGWAAGAGVDPSQVPGPDTEWQVIDGDILSVDAPVTLQWDNGAGLSFTRI 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 I +D++Y+F+I +V N S + +P G + RH F + + + D L E Sbjct: 183 IEIDDNYMFQITQSVANTSDAPVTVAPYGILARHGEPDDLKNFFILHEGVVAMADGELTE 242 Query: 232 QKYSDIEKSSISNFHESN---------SWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + DI + + W+G +D +W SV IP S KY Sbjct: 243 TNWDDIPEFPVDQREGVPAERIENVLNGWIGFTDHFWMSVLIPDPSASARLTTKYRP-RA 301 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQA+ T+ PG S++ T LFAGAKE+ TI +Y+ D + RF IDWGWF+F+ Sbjct: 302 DIYQAETVLPAQTVAPGTSVSATTQLFAGAKEWETIRNYQTD-GVDRFIDSIDWGWFFFL 360 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F L+ Y +GN G AI+ T+ +K + PLA K YVS A MK +QP++++L+E+ Sbjct: 361 TKPIFFLLHYLNAFIGNMGWAIIGLTLIIKAILLPLAYKSYVSMAKMKELQPQMEKLKEE 420 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q +Q+ M++LYK +NP AGC PILLQIP+FF++YKVI +++E+RHAPF+G Sbjct: 421 AGD-DRQKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPFFGPF 479 Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 +DL+A DPT+I L+G+LPF P + +GI P+++ +SM++Q K++P P D Q Sbjct: 480 QDLSAPDPTSIMNLYGLLPFDGPEPGSIMALIFIGILPLLLGISMWLQQKLNPAPTDPTQ 539 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 MI WMP VF+F L F +GL++YW +N I+ VQQ +IM+ G + + ++ F K Sbjct: 540 QMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFVQQYMIMRSQGYKPDVFGNIKGGFQK 599 Query: 577 NYNSQ 581 Sbjct: 600 KTKPD 604 >gi|209965568|ref|YP_002298483.1| hypothetical protein RC1_2283 [Rhodospirillum centenum SW] gi|209959034|gb|ACI99670.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 602 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 226/593 (38%), Positives = 323/593 (54%), Gaps = 33/593 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRI---EEMNNERKNIQTVKQPNQVDNSYAA-- 55 M N +AI +SV I++ + FY PR EE ++ +Q P V A Sbjct: 1 MTDQKNLILAIVISVAILFGFNYFYERPRQQALEEYRQQQAALQAETAPAAVPGVTAPGS 60 Query: 56 ------------------------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDD 91 DR L S RV++ P L GS+NL+G + DD Sbjct: 61 TVPGPAGDIPVPAPGAPAPTDAVPAAPRDRGAVLGDSQRVQVDTPRLHGSVNLRGGRIDD 120 Query: 92 LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKI 149 L L YH+ +SP V LLSP T YFAE +V TA+ LP T W +S Sbjct: 121 LTLANYHVTPDKSSPEVVLLSPVGTSQPYFAEFGWVPTADTAGQPLPGPTTDWQPVSQGP 180 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209 LTP +P+ L + N ++FER I++D Y+F + VTN S + P G + R T Sbjct: 181 LTPDSPVVLRWDNGQGLVFEREIAIDRDYMFTVTQRVTNQSGQPVTLHPYGFVQRRGTPT 240 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 + F + EG + V + + + + W G +DKYW +P + + Sbjct: 241 TSGFFILHEGALGVFDGTLREFDYSDLKDSTQPATQTTTGGWFGFTDKYWLVTLVPDQAS 300 Query: 270 SFHSQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + + G YQ F +T+ PG + +T+ LFAGAK T+ YE +L I Sbjct: 301 PVDVRVLHQDQGGQPLYQVDFRGQGLTVAPGATAESTHRLFAGAKIVRTLDAYESELGIA 360 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 RF +DWGWFYF+ KP F + +GNFGIAI++ TV ++L FFPLA KQY + A Sbjct: 361 RFSYAVDWGWFYFLTKPFFYGLDLLGQALGNFGIAILVFTVLLRLAFFPLANKQYKAFAK 420 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 MK +QPK++ELR++ Q L A ++LYK +NPL+GC PILLQIPVFFA+YKV+ Sbjct: 421 MKLLQPKMEELRKRHGD-DRQKLSMATMELYKQEKVNPLSGCLPILLQIPVFFALYKVLF 479 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 +++EMRHAPF+GWI DL+A DPT +F LFG++P+ PGF+ VG P++M +M++Q K+S Sbjct: 480 VTIEMRHAPFYGWITDLSAPDPTTVFNLFGLIPWSPPGFLMVGALPLMMGFTMWLQQKIS 539 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P D Q I +P +F + +++FPAGL+IYW+WSN+++I QQ IM+ G Sbjct: 540 PANPDPIQQRIFMVLPFLFTYMMAAFPAGLVIYWTWSNLLAIAQQWYIMRRMG 592 >gi|163733766|ref|ZP_02141208.1| putative inner membrane protein translocase component YidC [Roseobacter litoralis Och 149] gi|161392877|gb|EDQ17204.1| putative inner membrane protein translocase component YidC [Roseobacter litoralis Och 149] Length = 606 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 213/605 (35%), Positives = 331/605 (54%), Gaps = 28/605 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ------PNQVDNSYAA 55 ++N N +A ALS +++ W + P E + + P+ ++ + Sbjct: 3 DQNKNLILATALSFVVILVWFVLFPPPEPEIPLTSETSTELTPDAATGSLPSVTSDTAPS 62 Query: 56 VLID--DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 V+I+ R+ AL +PRVE+ L GSI+L G + DDL+L+ Y ++ IVT+LSP Sbjct: 63 VVIEGETRSAALEEAPRVEIATDRLKGSISLLGGRIDDLSLKDYRETQEDDADIVTMLSP 122 Query: 114 SNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + AY+A + + A ++P +T W +I G IL+ PI L + N + F R Sbjct: 123 VGSPGAYYALYGWAAGAGVDPSQVPGPDTEWQVIDGDILSVDAPITLQWNNGAGLSFTRI 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 I +D++Y+F+I +V N S + +P G + RH F + + + D L E Sbjct: 183 IEIDDNYMFEITQSVANTSDAPVTVAPYGILARHGEPADLKNFFILHEGVVAMADGELTE 242 Query: 232 QKYSDIEKSSISNFHESN---------SWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + DI + + W+G +D +W SV IP S KY Sbjct: 243 TNWDDIPEFPVDQREGVPAERIENVLNGWIGFTDHFWMSVLIPDPSASARLTTKYRP-RA 301 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQA+ T+ PG S++ T LFAGAKE+ TI +Y+ D + RF IDWGWF+F+ Sbjct: 302 DIYQAETVLPAQTVAPGTSVSATTQLFAGAKEWETIRNYQTD-GVDRFIDSIDWGWFFFL 360 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F L+ Y +GN G AI+ T+ +K + PLA K YVS A MK +QP++++L+E+ Sbjct: 361 TKPIFFLLHYLNAFIGNMGWAIIGLTLIIKAILLPLAYKSYVSMAKMKELQPQMEKLKEE 420 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q +Q+ M++LYK +NP AGC PILLQIP+FF++YKVI +++E+RHAPF+G Sbjct: 421 AGD-DRQKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPFFGPF 479 Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 +DL+A DPT+I +G+LPF P + +GI P+++ +SM++Q K++P P D Q Sbjct: 480 QDLSAPDPTSIMNFYGLLPFDGPEPGSIMALIFIGILPLLLGISMWMQQKLNPAPTDPTQ 539 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + + ++ F K Sbjct: 540 QMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFAQQYMIMRSQGYKPDVFGNIKGGFQK 599 Query: 577 NYNSQ 581 Sbjct: 600 KTKPD 604 >gi|85705859|ref|ZP_01036955.1| putative inner membrane protein translocase component YidC [Roseovarius sp. 217] gi|85669447|gb|EAQ24312.1| putative inner membrane protein translocase component YidC [Roseovarius sp. 217] Length = 611 Score = 447 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 212/599 (35%), Positives = 332/599 (55%), Gaps = 22/599 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPR---IEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ++N N A ALS +++ W + P ++ Q+V P + A Sbjct: 3 DQNKNLIFATALSFLVILVWFVMFPPPESPAVDPNAPVPSATQSVPAPVADSTADATTTQ 62 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 +PR+ + PSL G+I+L+G + DDL L+ Y + S IV LL+P ++ Sbjct: 63 TAAPATEPDAPRLNIDTPSLQGTISLQGGRIDDLFLKNYRETIDPASDIVRLLAPVGSEA 122 Query: 119 AYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 Y+A + A ++P SNT+W + SG+ LTPT+PI L + N ++F R +S+DE Sbjct: 123 PYYALYGWAPGAGLTADQVPGSNTLWQIESGETLTPTSPITLSWDNGAGLIFRRELSVDE 182 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 ++F + +V N + +P G + RH F + + + D +L E KY D Sbjct: 183 DFMFSVRQSVENTGASAVSLAPYGILARHGRPADLKKFFILHEGLIGMADGTLSEIKYDD 242 Query: 237 IEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 +E+ + N W+G +D YW + IP+ F S K+ +Q Sbjct: 243 VEEYPFNAREGAPAEVTQVTENGWIGFTDHYWMTTLIPASGNPFKSVSKF-DPQRGIFQT 301 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + T+ PG++ + LFAGAKE+ TI Y+ + + RF IDWGWF+F+ KP+F Sbjct: 302 ETVQPTQTVEPGQTASADTRLFAGAKEWATIRAYQNEQGVDRFLDSIDWGWFFFLTKPIF 361 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 + + + ++GN G AI+ T+ +K L PLA K YVS A MK +QP++++++E Sbjct: 362 AALHWLHAIIGNMGWAIIALTLLIKALVLPLAYKSYVSMAKMKELQPQMEKIKE-TAGDD 420 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q LQK M++LYK +NP AGC PILLQIP+FF++YKVI ++LE+RHAP+ WIKDL+A Sbjct: 421 RQKLQKEMMELYKREKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHAPWVAWIKDLSA 480 Query: 468 ADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 D ++++ L+GILP+ P + +GI P+ + +SM++Q K++P P D Q MI Sbjct: 481 PDTSSLYNLWGILPWAAPEPGSVLALIFIGILPLCLGVSMWLQQKLNPSPTDPTQKMIFA 540 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 WMP VF+F L SF +GL+IYW +NVI+ QQ VIM+ HG + + + S+F + + Sbjct: 541 WMPWVFMFMLGSFASGLVIYWIANNVITFSQQYVIMRSHGHKPDVFGNILSSFKRKKPA 599 >gi|254439216|ref|ZP_05052710.1| 60Kd inner membrane protein [Octadecabacter antarcticus 307] gi|198254662|gb|EDY78976.1| 60Kd inner membrane protein [Octadecabacter antarcticus 307] Length = 590 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 202/592 (34%), Positives = 324/592 (54%), Gaps = 18/592 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ----PNQVDNSYAAVL 57 ++N N +A ALS I++ W + P + E + T QV A + Sbjct: 3 DQNKNLILATALSFIVILIWFVLFPPPDVTEPAPTAEVTSTDGTTLGVDAQVPTQVAVLP 62 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A++ +PR+ + + +L GS++L G + DDL+L+ Y + + S++ +V LLSP T+ Sbjct: 63 PLSAEDAIADAPRIMIDSENLTGSLSLTGGRIDDLSLKDYRVTLDSDADLVRLLSPIGTE 122 Query: 118 NAYFAELDYVST--ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 Y+A +V+ A ++P ++T W L SG L P + I L++ N + F +T ++D Sbjct: 123 APYYALNGWVAAVGATADQVPGASTQWQLESGDTLEPGSDITLIWDNGAGLTFRKTFAVD 182 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV--EQK 233 E++LF + TV N++ +I P G + RH F EG + + Sbjct: 183 ENFLFTVTQTVENSTGAEIALRPYGLVARHGEPDQIGFFIQHEGVVRMSDGSMEEINYGD 242 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D+ E N W+G SD+YW + IP+ F S K+ ++ YQ + Sbjct: 243 MPDLTSDEGRIEVEENGWIGFSDQYWMTALIPTPGRDFRSTAKFANN---IYQIETVYPL 299 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 T+ G + + FAGA+E+ I Y+ DL I RF IDWGWF+F+ KP+F ++ + Sbjct: 300 TTVASGATASAETQFFAGAQEWVVIRSYQDDLGIDRFLDSIDWGWFFFLTKPIFAVLHWL 359 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 L+GN G +I+ T +K L PLA K YVS A M+ +QP++ +L+E + LQK Sbjct: 360 NGLIGNMGWSIICLTFVIKALLLPLAYKSYVSMAKMRELQPEMAKLKEAAGDDREK-LQK 418 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M+ LYK + +NP +GC PIL+QIP+FF++YKVI +++E+RHAP+ GWI DL+A D + + Sbjct: 419 GMMSLYKENKVNPASGCLPILMQIPIFFSLYKVIFVTIELRHAPWIGWINDLSAPDTSTL 478 Query: 474 FTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 + LFG+LP+ P + +G+ PI++ +SM++Q K++P P D Q MI WMP VF Sbjct: 479 YNLFGLLPWGAPAPDSILALVFIGVMPIVLGISMWLQQKLNPAPTDPTQKMIFAWMPWVF 538 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 +F L SF +GL++YW +N I+ +QQ IM+ G + L + + Sbjct: 539 MFMLGSFASGLVLYWIANNTITFMQQYAIMRSQGFKPDLFGNITGRKDSDPE 590 >gi|259415716|ref|ZP_05739636.1| inner membrane protein OxaA [Silicibacter sp. TrichCH4B] gi|259347155|gb|EEW58932.1| inner membrane protein OxaA [Silicibacter sp. TrichCH4B] Length = 611 Score = 445 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 218/607 (35%), Positives = 333/607 (54%), Gaps = 30/607 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 ++N N +A ALS +++ W F+ P + T + + A + Sbjct: 3 DQNKNLLLATALSFLVILGWYFFFPPPEEAPQPAAQVTETTATPGDTSGPAAAPSAGEAT 62 Query: 62 AQALS----------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A+A + +PR+ + P + GSI+LKG + DDL L+ Y + +SPIVTLL Sbjct: 63 AEADAAATAEVDAAEDAPRLAINTPRVEGSISLKGGRIDDLRLKDYRETLDDDSPIVTLL 122 Query: 112 SPSNTKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 SP+ NAY+A + ++P +NT W G LTP T + L + N + F Sbjct: 123 SPAGQANAYYALYGWAPGTGLGIEDVPTANTRWQAADGATLTPETSVTLTWDNGKGLTFS 182 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 R I++DE Y+F I +VTN S + + +P G + RH F V + + D L Sbjct: 183 REIAIDEDYMFSITQSVTNTSGESVALAPYGTLARHGLPANLENFFVLHEGVVGMADGEL 242 Query: 230 VEQKYSDIEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 E Y D+ S N W+G + YW S IP+ +F S KY + Sbjct: 243 AEIDYDDMTDFDPDPRDGSRSQITSVTENGWIGFTGHYWMSTLIPAPGDAFRSIVKY-DE 301 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 YQ +T+ G+S + + LFAGAKE+ TI YE+ I F IDWGWF+ Sbjct: 302 RRDIYQTDVVLPTVTLAAGESTSASTQLFAGAKEWATIREYERG-GIAGFLDSIDWGWFF 360 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F KP+F ++ + +GN G+AI+ T +K+L FPLA K Y S A MK +QP++++LR Sbjct: 361 FFTKPIFAVLHWLNAAIGNMGVAIIALTFLLKILVFPLAYKSYASMARMKELQPEMEKLR 420 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q +QK M++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RH+ F+G Sbjct: 421 ERAGD-DRQKMQKEMMELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHSAFFG 479 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADK 514 +DL+A DPT+++ LFG+LP+ P + +GI PI++ +SM++Q K++P PAD+ Sbjct: 480 PFQDLSAPDPTSLYNLFGLLPWGAPAPDSLLALVFIGILPILLGISMWLQQKLNPAPADE 539 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 Q MI WMP VF+F L F +GL++YW +NVI+ QQ +IM+ HG + ++S+F Sbjct: 540 TQKMIFAWMPWVFMFMLGGFASGLVVYWITNNVITFTQQYLIMRSHGYTPDVFGNIKSSF 599 Query: 575 SKNYNSQ 581 + ++ Sbjct: 600 KRGEKAE 606 >gi|83594668|ref|YP_428420.1| putative inner membrane protein translocase component YidC [Rhodospirillum rubrum ATCC 11170] gi|83577582|gb|ABC24133.1| protein translocase subunit yidC [Rhodospirillum rubrum ATCC 11170] Length = 595 Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 215/598 (35%), Positives = 335/598 (56%), Gaps = 37/598 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ-------------TVKQPN 47 M + N +AI LS+ +++ ++ F+ + ++ + Q +V+ P Sbjct: 1 MLQQRNLILAIVLSMAVLFGFEYFFGAKQPPMTAQQQDSAQMAAPSNGQMAAPSSVQAPG 60 Query: 48 QVDNSYAAVLIDDRAQALSM--------------------SPRVELKNPSLIGSINLKGA 87 Q + V A + SPR+ + L GSI L+GA Sbjct: 61 QSPVAAPQVPAQPGAAVPTPGGMTPGAASLSREEALAADISPRIGIDTARLHGSIRLRGA 120 Query: 88 QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147 + DDL+L Y V SP ++LLSP Y+AE +V+ +++P+++T+W G Sbjct: 121 RIDDLSLVDYRETVDPQSPEISLLSPPGAPLPYYAEFGWVAGTPGVKVPDADTLWQADRG 180 Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 + P+ L + N + F R I++D ++F I V N + P G + R Sbjct: 181 ALGVDA-PVTLTWDNGEGLRFIRKIAIDHDFMFSITQAVENTGAGAVTLFPYGLVSRINT 239 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 N + + EG + V +L E KYS ++ + W+GI+DKYW + + + Sbjct: 240 PALLNYYILHEGPLGVFD-GTLKEVKYSALKDDGEVKHTSTGGWMGITDKYWLTALVTDQ 298 Query: 268 ETSFHSQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 +F Y DG YQA F T+ PG I T+N LF+GAKE + Y +L Sbjct: 299 SMPVTGRFLYQPRDGRDGYQADFLGAAFTVEPGGRIETSNHLFSGAKEVKLLDRYTDELG 358 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 I F++ ID+GWFYF+ KP F+ + + + ++GN G+AI+ TV +KL+FFPLA K Y S Sbjct: 359 IKNFDLAIDFGWFYFMTKPFFLSIQFLHGILGNMGLAILAFTVVLKLVFFPLANKSYRSM 418 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 + MK +QP++ +L+E+FK L + M+ LYK +NPL+GC PI++QIPVFFA+YKV Sbjct: 419 SKMKLLQPELKKLQERFKDDRA-RLNQEMMSLYKKEQVNPLSGCLPIVIQIPVFFALYKV 477 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + +S+EMRH PF+GWI+DLAA DPT +F LFG++P+ P + +G WP+IM ++M++Q K Sbjct: 478 LFVSIEMRHEPFYGWIRDLAAPDPTTVFNLFGLIPWDPPNMLMLGAWPLIMGVTMWMQQK 537 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 ++P PAD QA I+ ++P++F F L+ F AGL+IYW+W+N++SI QQ VIMK GA+ Sbjct: 538 LNPTPADPTQAKIMMFLPIMFTFMLAHFAAGLVIYWTWNNLLSITQQWVIMKRMGAKT 595 >gi|148556519|ref|YP_001264101.1| putative inner membrane protein translocase component YidC [Sphingomonas wittichii RW1] gi|148501709|gb|ABQ69963.1| protein translocase subunit yidC [Sphingomonas wittichii RW1] Length = 577 Score = 444 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 210/570 (36%), Positives = 316/570 (55%), Gaps = 12/570 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 ME N +AI LS ++++ WQ F+ + E + + QP + Sbjct: 1 MENQRNMILAIVLSALVLFGWQFLGDRFFPPAKPPVTKIEGGQEKVLPQPGADPAAAGPK 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 I RA L +PRV + P L GSINLKGA+ DDL L+ Y V+ N+P + LLSP + Sbjct: 61 AIRARAAVLRETPRVAIDTPKLAGSINLKGARIDDLVLKAYRETVAKNAPPIRLLSPLGS 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 AY+A + T + ++ P NTVW SG LTP TP+ L + N FE I++D Sbjct: 121 PAAYYAGFGW--TGDGVDAPGPNTVWT-ASGTALTPETPVTLSWTNTRGQRFETVIAVDR 177 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS- 235 Y+F I + N + P G I + +++ + G I V D + + + Sbjct: 178 DYMFTITQKLVNGGAGAVAARPYGLISKDGVSKDPSSWTLHTGPIGVFNDAANYDLSFKK 237 Query: 236 -DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D F + WLG DKYW + +P + S + F YQA S + Sbjct: 238 LDEAGQPGIRFASTGGWLGFGDKYWLTALVPDSKASVDAGFLST--APQVYQAVESGRAL 295 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I PG++ + + FAGAKE + YE D +P F IDWGWF + KP+F ++ + Sbjct: 296 VIAPGQAGSVSQRFFAGAKEVALLDRYENDQGVPLFSRAIDWGWFRVLEKPIFWVLDQVF 355 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 LVGNFG+AI++ T V+ L FP+A+KQ+ S A M+ +QPK+ EL+E+ K P LQ+ Sbjct: 356 KLVGNFGVAIIILTFLVRGLMFPIAQKQFRSMAGMRRVQPKMKELQERLKDDKP-RLQQE 414 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +++LY+ +NPLAGC PIL+QIPVF+A+YKV+ +++EMRH PF WI+DL+A DP ++ Sbjct: 415 LLKLYQEEKVNPLAGCLPILVQIPVFYALYKVLMVTIEMRHQPFVLWIRDLSAPDPLHVL 474 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 LFG+L F P F+ +G+ +++ +SM++Q K++P P D Q + MP + +F ++ F Sbjct: 475 NLFGLLDFTPPAFLGIGVLALLLGVSMWLQFKLNPQPMDDAQKQVFALMPWIMMFIMAPF 534 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 AGL+IYW SN ++I QQA + + H E Sbjct: 535 AAGLLIYWVTSNFLTIAQQAWLYRQHPVEP 564 >gi|254464722|ref|ZP_05078133.1| 60 kDa inner membrane insertion protein [Rhodobacterales bacterium Y4I] gi|206685630|gb|EDZ46112.1| 60 kDa inner membrane insertion protein [Rhodobacterales bacterium Y4I] Length = 600 Score = 444 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 223/600 (37%), Positives = 334/600 (55%), Gaps = 23/600 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 ++N N +A LS +++ W + P E+ + + S AA +D Sbjct: 3 DQNKNLILATVLSFLVILGWYTLFPPPEPEQAPETAVSETAPAGNTALAPSAAAEAVDSS 62 Query: 62 AQALSMSP---RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A A + +P R+ + P + GSI+L+G + DDL+L+ Y + +NSPIV LL P Sbjct: 63 APAQAEAPQAARLAIDTPRVTGSISLQGGRIDDLSLKDYRETLDANSPIVKLLKPVGEAQ 122 Query: 119 AYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 AY+A + A ++P +NTVW+ + LTP +P+ L + N + F RTIS+DE Sbjct: 123 AYYALYGWAPGAGLSLDDVPGANTVWSAGADATLTPDSPVTLTWDNGKGLTFSRTISVDE 182 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y+F I +V N S + +P G + RH F + + + D L E Y D Sbjct: 183 DYMFSITQSVANASGGTVSLAPYGTLARHSQPADLKNFFILHEGLVGMSDGELAEIDYDD 242 Query: 237 IEKSSISNFHES---------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + S N W+G +D YW S +P+ +F S K+ + YQ Sbjct: 243 MADFEADARDGSKAEVRQVAENGWIGFTDHYWMSTLVPAPGQAFRSIAKF-DERRDIYQT 301 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +T+ G+S T LFAGAKE+ TI Y+K I F +IDWGWF+F+ KPMF Sbjct: 302 DIVLPTVTVADGQSSEVTTQLFAGAKEWETIRGYQKA-GIQGFLDVIDWGWFFFLTKPMF 360 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ L+GN G AI+ TV +K+L FPLA K Y S A MK +QP++++L+E+ Sbjct: 361 WLLHNLNVLIGNMGWAIIGLTVVIKILVFPLAYKSYASMAKMKELQPEMEKLKERAGD-D 419 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q +QK M++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G +DL+A Sbjct: 420 RQKMQKEMMELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQDLSA 479 Query: 468 ADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 DPT+IF LFG+LP+ P + +GI PI++ +SM++Q K++P P D Q MI Sbjct: 480 PDPTSIFNLFGLLPWAAPAPESILALVFIGILPILLGVSMWLQQKLNPAPTDPTQQMIFA 539 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG + ++S+F K ++ Sbjct: 540 WMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYSPDVFGNIKSSFKKKPKAE 599 >gi|254512338|ref|ZP_05124405.1| 60 kDa inner membrane insertion protein [Rhodobacteraceae bacterium KLH11] gi|221536049|gb|EEE39037.1| 60 kDa inner membrane insertion protein [Rhodobacteraceae bacterium KLH11] Length = 607 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 208/607 (34%), Positives = 333/607 (54%), Gaps = 31/607 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNI----QTVKQPNQVDNSYAAVL 57 ++N N +A LS +++ W + P + + V+ P+ Sbjct: 3 DQNKNLILATVLSFLVIIVWFVLFPPPEPTPGEEQAEIAVLEGDEVQTPSASGTVGEVTA 62 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + A +PRV++ P L GS++L G + D+L L+ Y + + +PIV LL+P T+ Sbjct: 63 ATEEALPEEQAPRVQIDTPRLKGSLSLSGGRIDELFLKDYKVSIEEGAPIVELLAPVGTE 122 Query: 118 NAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 +AY+A + A ++P NTVW L G++L P+ LV++N N + F R IS+D Sbjct: 123 SAYYALYGWAPAAGLAGADVPGPNTVWALEQGEVLGVDAPVTLVWENGNGLTFRRMISVD 182 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP------QTATNTFGVQEGFIAVLGDKSL 229 + Y+F + +V N + ++ +P G + RH N F + EG I + +L Sbjct: 183 QDYMFTVTQSVENGTQSEVGMAPYGILARHGIGEDGDLPGLKNFFILHEGVIGMSD-GTL 241 Query: 230 VEQKYSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 E Y D+ I + W+G +D YW + IP ++F + KY Sbjct: 242 TEVDYGDVRDFDIDPIERAQAEVYQVNQDGWIGFTDHYWMTTLIPEPGSAFKAAAKY-DS 300 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 YQ + +T+ PG++ T LFAGAKE+ TI Y+ + + +F IDWGWF+ Sbjct: 301 RRKIYQTETVLPTVTVAPGETTEVTTRLFAGAKEWETIREYQAE-GVQKFIDSIDWGWFF 359 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ KP+F L+ L+GN G +I+ T+ +K + FPLA K YVS A MK +QP+++ L+ Sbjct: 360 FLTKPIFWLLHNINALIGNMGWSIIGLTLIIKAILFPLAYKSYVSMAKMKELQPQMEALK 419 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E Q +Q+ M++LYK +NP AGC PIL+QIP+FF++YKVI +++E+R AP++G Sbjct: 420 EAAGD-DRQKMQQGMMELYKKEKVNPAAGCLPILMQIPIFFSLYKVIFVTIELRQAPWFG 478 Query: 461 WIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 +DL+A DPT+I LFG+LPF P + +GI P+++ +SM++Q K++P P D Sbjct: 479 PFQDLSAPDPTSIMNLFGLLPFAGPQPDTFLALIFIGILPLLLGISMWLQQKLNPAPTDP 538 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 QAMI WMP VF+F L SF +GL++YW +N I+ QQ +IM+ G + + ++S F Sbjct: 539 TQAMIFAWMPWVFMFMLGSFSSGLVVYWIANNTITFTQQYLIMRSQGYKPDVFGNIKSGF 598 Query: 575 SKNYNSQ 581 + + Sbjct: 599 KRTPKTD 605 >gi|163740285|ref|ZP_02147679.1| putative inner membrane protein translocase component YidC [Phaeobacter gallaeciensis 2.10] gi|161386143|gb|EDQ10518.1| putative inner membrane protein translocase component YidC [Phaeobacter gallaeciensis 2.10] Length = 605 Score = 442 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 213/604 (35%), Positives = 331/604 (54%), Gaps = 27/604 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY-------PRIEEMNNERKNIQTVKQPNQVDNSYA 54 ++N N +A ALS +++ W F+ + ++ + Sbjct: 3 DQNKNLLLATALSFLVILGWYVFFPPPEPQPQPDAVVAETAPAGDVVSAPAAASPAAGSE 62 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + A+ + +PR+ ++ P + G+I+L G + DDL+L+ Y + + ++ IV +LSP+ Sbjct: 63 GAAVTAEAETAADAPRLTIETPRVSGTISLLGGRLDDLSLKDYRVSLEEDAAIVKMLSPA 122 Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 NAY+A + A ++P +NT+W LTP +P+ L + N + F RTI Sbjct: 123 GDPNAYYALYGWAPGAGLGPDDVPGANTLWQAEGDATLTPDSPVTLTWDNGKGLTFNRTI 182 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 ++D+ YLF I +VTN S + +P G + RH F + + + D +L E Sbjct: 183 AVDQDYLFTITQSVTNASGSTVALAPYGTLARHGEPQDLKNFFILHEGVIGMADGTLAEI 242 Query: 233 KYSDIEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 Y D+ + E+N W+G +D YW S +P +F S K+ + Sbjct: 243 DYDDMTDFEVDARSGARAEVTQVETNGWIGFTDHYWMSTLVPEPGQAFRSIAKF-DERRE 301 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 YQ +T+ G + T LFAGAKE+ TI Y+KD I F IDWGWF+F+ Sbjct: 302 IYQTDIVLPTVTVAAGDTSEVTTMLFAGAKEWATIRGYQKD-GIEGFLDSIDWGWFFFLT 360 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F ++ + L+GN G AI+ TV +KLL FPLA K Y S A MK +QP+++E++EK Sbjct: 361 KPIFAVLHWLNALIGNMGWAIIGLTVLIKLLVFPLAYKSYASMAKMKELQPRMEEIKEKA 420 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q LQ+ M+ LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G + Sbjct: 421 GD-DRQKLQQEMMALYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQ 479 Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+A DPT+I LFG+LP P + +GI PI++ +SM++Q K++P P D Q Sbjct: 480 DLSAPDPTSIMNLFGLLPMAAPVEGTLMATIFIGILPILLGISMWLQQKLNPAPTDPTQQ 539 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG + + ++S F K Sbjct: 540 MIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSGFKKT 599 Query: 578 YNSQ 581 ++ Sbjct: 600 PKAE 603 >gi|310816968|ref|YP_003964932.1| inner membrane protein oxaA, putative [Ketogulonicigenium vulgare Y25] gi|308755703|gb|ADO43632.1| inner membrane protein oxaA, putative [Ketogulonicigenium vulgare Y25] Length = 612 Score = 442 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 203/602 (33%), Positives = 315/602 (52%), Gaps = 25/602 (4%) Query: 1 ME-RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN-----QVDNSYA 54 ME +N N +A LS++++ W + + + + + Sbjct: 1 MENQNKNLILATVLSLVVIVVWFFLFPPEATNPTLTDEQTTSVATDGTLPVGGAGSTAGS 60 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 I D + + + RV ++ P L GSI+L G + DDL L Y + +S V LL P Sbjct: 61 LEAITDADASPATAARVGIETPRLSGSISLLGGRIDDLFLSDYQETIDEDSATVRLLRPV 120 Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLIS-GKILTPTTPIKLVFKNANNILFERT 171 + AY+A + + +P +T+W+L S LTP TP+ LV+ N +F T Sbjct: 121 GERGAYYASFGWAAAQGIAPEAVPGPDTLWSLESANDTLTPETPVTLVWDNGAGQVFRTT 180 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 ++D Y+F + +V N + P G + RH F + I + D L E Sbjct: 181 FAIDADYMFTVDQSVQNMGDAAVEMRPYGLVRRHGMPEGLREFFILNEGIVRMADGRLEE 240 Query: 232 QKYSDIEKSS--------ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 KYS + + + + W+G +D YW + IP + F S KYL Sbjct: 241 MKYSKMSDMNDAELGVPAEVAEAQESGWIGFTDHYWMTTLIPEQGQPFRSVQKYLP-SRD 299 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 +Q + + G +T + LFAGAKE+ TI Y+ + +PRF IDWGWFYF+ Sbjct: 300 IFQVEAVMPRQDVAAGAEVTISTRLFAGAKEWATIREYQNEDGVPRFIDSIDWGWFYFLT 359 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F ++ + +GN G +I+ T+ +K + PLA K YVS A MK +QP++++L+ + Sbjct: 360 KPIFSVLHWLNQHIGNMGWSIIALTLILKAIVLPLAYKSYVSMARMKELQPELEKLQARH 419 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K Q LQ M++LYK + +NP +GC P+++QIP+FF++YKVI +++E+RHAP+ GW++ Sbjct: 420 KD-DRQALQTGMMELYKKNKVNPASGCLPMIVQIPIFFSLYKVIFVTIELRHAPWIGWLQ 478 Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+A DPT+I LFG+LP+ P +G+ PI + LSM++Q K++P P D Q Sbjct: 479 DLSAPDPTSILNLFGLLPWGTPEIDSFFFIFSLGVLPIFLGLSMWLQQKLNPLPPDPTQR 538 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MI WMP VF+F L SF +GL++YW +NVI+ VQQ IM HG L + F + Sbjct: 539 MIFAWMPWVFMFMLGSFSSGLVLYWIANNVITFVQQYSIMTYHGHRPDLFGNILGGFKRK 598 Query: 578 YN 579 Sbjct: 599 PK 600 >gi|163739492|ref|ZP_02146902.1| 60 kDa inner membrane insertion protein [Phaeobacter gallaeciensis BS107] gi|161387245|gb|EDQ11604.1| 60 kDa inner membrane insertion protein [Phaeobacter gallaeciensis BS107] Length = 605 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 213/604 (35%), Positives = 333/604 (55%), Gaps = 27/604 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY-------PRIEEMNNERKNIQTVKQPNQVDNSYA 54 ++N N +A ALS +++ W F+ + ++ + Sbjct: 3 DQNKNLLLATALSFLVILGWYVFFPPPEPQPQPDAVVAETAPAGDVVSAPAAASPAAGSE 62 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + A+ + +PR+ ++ P + G+I+L G + DDL+L+ Y + + ++ IV +LSP+ Sbjct: 63 GAAVTAEAETAADAPRLAIETPRVSGTISLLGGRLDDLSLKDYRVSLEEDAAIVKMLSPA 122 Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 NAY+A + A ++P +NT+W LTP +P+ L + N + F RTI Sbjct: 123 GDPNAYYALYGWAPGAGLGPDDVPGANTLWQAGGDATLTPDSPVTLTWDNGKGLTFNRTI 182 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 ++D+ YLF I +VTN S + + +P G + RH F + + + D +L E Sbjct: 183 AVDQDYLFTITQSVTNASGNTVALAPYGTLARHGEPQDLKNFFILHEGVIGMADGTLAEI 242 Query: 233 KYSDIEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 Y D+ + E+N W+G +D YW S +P +F S K+ + Sbjct: 243 DYDDMTDFEVDARSGARAEVTQVETNGWIGFTDHYWMSTLVPEPGQAFRSIAKF-DERRE 301 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 YQ +T+ G++ T LFAGAKE+ TI Y+KD I F IDWGWF+F+ Sbjct: 302 IYQTDIVLPTVTVADGETSEATTMLFAGAKEWATIRGYQKD-GIEGFLDSIDWGWFFFLT 360 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F ++ + L+GN G AI+ TV +KLL FPLA K Y S A MK +QP+++E++EK Sbjct: 361 KPIFAVLHWLNALIGNMGWAIIGLTVLIKLLVFPLAYKSYASMAKMKELQPRMEEIKEKA 420 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q LQ+ M+ LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G + Sbjct: 421 GD-DRQKLQQEMMALYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQ 479 Query: 464 DLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 DL+A DPT+I LFG+LP P + +GI PI++ +SM++Q K++P P D Q Sbjct: 480 DLSAPDPTSIMNLFGLLPMAAPVEGTLMATIFIGILPILLGISMWLQQKLNPAPTDPTQQ 539 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG + + ++S F K Sbjct: 540 MIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSGFKKT 599 Query: 578 YNSQ 581 ++ Sbjct: 600 PKAE 603 >gi|126728217|ref|ZP_01744033.1| putative inner membrane protein translocase component YidC [Sagittula stellata E-37] gi|126711182|gb|EBA10232.1| putative inner membrane protein translocase component YidC [Sagittula stellata E-37] Length = 600 Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 208/600 (34%), Positives = 334/600 (55%), Gaps = 24/600 (4%) Query: 1 MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP--------NQVDN 51 M+ N N F+A ALS +++ W + E N + P Sbjct: 1 MDEQNKNLFLATALSFVVILVWFILFPPQDPVEDPNAPAEVSQTADPATGVAAVPEAAPG 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + AA + A+ +PR+ L L GSI+L G + DDL L+ Y + + S+ IV + Sbjct: 61 TEAAAPAGEPVDAVDDAPRLPLDTARLEGSISLTGGRLDDLRLKDYTVSLDSDE-IVQVF 119 Query: 112 SPSNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 + +AY+ + E+P +NT W++ +G+ LT TP+ L + + + ++F Sbjct: 120 HRVGSSDAYYTLYGWAPGGGLSMDEVPGANTPWSVETGETLTTETPVTLRWDSPSGLIFR 179 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 RTI++DE+Y+F + T+ N S + +P G + RH F + + D L Sbjct: 180 RTIAVDENYMFTVTQTIENASDASVSLAPYGVLARHGEPQNVKKFFILHEGGISMIDGEL 239 Query: 230 VEQKYSDIEKS--SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 E Y D + + E+ W G +D YW S IP++ + S F + + YQ Sbjct: 240 TETDYDDFQTAGQHQDVTMETAGWTGFTDHYWMSTLIPTQPGTKVSTF--HNQSNDIYQT 297 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 +T+ PG++ ++ LFAGAKE+ TI Y+K+ + RF IDWGWF+F+ KP+F Sbjct: 298 TARMPTMTVAPGETQQVSSKLFAGAKEWETIREYQKN-GVDRFIDSIDWGWFFFLTKPIF 356 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ + + ++GN GIAI+ T+ +K+L FPLA K Y S A MK +QP++++L+E+ Sbjct: 357 AVLHWLHGVIGNMGIAIIGLTILLKILLFPLAYKSYASMAKMKELQPEMEKLKERAGDDR 416 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + LQK M+ LYK +NP AGC PILLQIP+FF++YKVI ++LE+RHA F+G +DL+A Sbjct: 417 EK-LQKEMMALYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHANFFGPFRDLSA 475 Query: 468 ADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 DPT+++ LFG+LP+ P + +GI PI++ +SM++Q K++P PAD Q MI Sbjct: 476 PDPTSLYNLFGLLPWAAPEAGSILALVFIGILPILLGISMWLQQKLNPAPADPTQQMIFA 535 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG ++ ++ +F + + Sbjct: 536 WMPWVFMFMLGGFASGLVVYWITNNTITFTQQYLIMRSHGYHPNVLGNIKGSFKRGKKDE 595 >gi|149203002|ref|ZP_01879973.1| putative inner membrane protein translocase component YidC [Roseovarius sp. TM1035] gi|149143548|gb|EDM31584.1| putative inner membrane protein translocase component YidC [Roseovarius sp. TM1035] Length = 611 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 208/599 (34%), Positives = 335/599 (55%), Gaps = 22/599 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEE---MNNERKNIQTVKQPNQVDNSYAAVLI 58 ++N N +A ALS +++ W + P +++ P+ + A Sbjct: 3 DQNKNLILATALSFVVILVWFVMFPPPEPAPVDPNAAVPTATESLPTPSATGGAEATTAT 62 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A +PR+ + PSL G+I+L+G + DD+ L+ Y + S IV L++P + Sbjct: 63 TAAPVAEPDAPRLTIDTPSLKGTISLQGGRIDDIFLKNYRETIDPASEIVRLMAPVGNET 122 Query: 119 AYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 Y+A + A ++P +NT+W + SG+ LT +TP+ L + N ++F R +S+DE Sbjct: 123 PYYALYGWAPGAGLTPDQVPGANTLWQVESGEKLTTSTPVTLSWDNGAGLIFRRELSVDE 182 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 ++F + +V N + +P G + RH F + + ++ D +L E Y D Sbjct: 183 DFMFSVRQSVENTGATAVSLAPYGILARHGRPADLKNFFILHEGLIMMADGTLSEIDYDD 242 Query: 237 IEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 +E+ + N W+G +D YW + IP+ +SF + K+ YQ Sbjct: 243 VEEYPFNAREGAPAEVTQVTENGWIGFTDHYWMTTLIPAAGSSFKAVAKF-DPQRGIYQT 301 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + T+ PG++ + LFAGAKE+ TI HY+ + + RF IDWGWF+F+ KP+F Sbjct: 302 EAVQPTQTVEPGQTASAETRLFAGAKEWATIRHYQNEQGVDRFLDSIDWGWFFFLTKPIF 361 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ + L+GN G AI+ T+ +K L PLA K YVS A MK++QP++++++E Sbjct: 362 AVLHWLNALIGNMGWAIIALTLLIKALVLPLAYKSYVSMAKMKDLQPQMEKIKE-TAGDD 420 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q LQK M++LYK +NP AGC PILLQIP+FF++YKVI ++LE+RHAP+ GWIKDL+A Sbjct: 421 RQKLQKEMMELYKREKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHAPWVGWIKDLSA 480 Query: 468 ADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 DP+++F L+G+LP+ P + +GI P+ + +SM++Q K++P P D Q MI Sbjct: 481 PDPSSLFNLWGVLPWAAPEPGSIMALIFIGILPLALGISMWLQQKLNPSPTDPTQKMIFA 540 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 WMP VF+F L SF +GL+IYW +NVI+ QQ +IM+ G + + + S F + + Sbjct: 541 WMPWVFMFMLGSFASGLVIYWIANNVITFSQQYMIMRSQGYKPDVFGNITSGFKREKPA 599 >gi|255264683|ref|ZP_05344025.1| 60 kDa inner membrane insertion protein [Thalassiobium sp. R2A62] gi|255107018|gb|EET49692.1| 60 kDa inner membrane insertion protein [Thalassiobium sp. R2A62] Length = 601 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 203/599 (33%), Positives = 328/599 (54%), Gaps = 26/599 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID-- 59 ++N N +A ALS +++ W + + Q++ Sbjct: 3 DQNKNLILATALSFLVILVWFVLFPPEEPVVDPITAETAQSIDGATVPTADTGIAPTTGE 62 Query: 60 ---DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 ++ S +PR+ ++ L GSI+L G + DDL+L+ Y +++ + +V LLSP T Sbjct: 63 AEPEQEAEASDAPRIAIETEKLSGSISLLGGRLDDLSLKDYPIELDAEE-VVRLLSPVGT 121 Query: 117 KNAYFAELDYVSTANNIE--LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 NAY+A + + +P NT+W + SG L + + L + N + F R IS+ Sbjct: 122 DNAYYALYGWAAAQGVAADAVPGPNTLWTVESGDTLNTSDAVTLAWDNGAGLTFRREISV 181 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 DE Y+F I +V N + ++ +P G I RH F + EG + + L E Y Sbjct: 182 DEDYMFNITQSVENTTSTEVALAPYGFIARHGEPDTVGFFILHEGVVRMSD-GELQEIDY 240 Query: 235 SDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 +D+ I N W+G +DKYW + +P++ ++F S Y + + Y Sbjct: 241 NDMPDFDIDARRGAPAESIDVTENGWVGFTDKYWMTNIVPTQGSAFKSSAIY-NPRNDIY 299 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 Q + T+ G + + LFAGAKE+ I +Y+ D I F IDWGWF+F+ KP Sbjct: 300 QTEALMPTQTVAVGATAAVSTQLFAGAKEWEAIRNYQNDGGIDGFLDSIDWGWFFFLTKP 359 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++GN G +I++ T+ +K + PLA K YVS A MK +QP++++L+E Sbjct: 360 IFALLHWLNGVIGNMGWSIIVLTLIIKAILLPLAYKSYVSMARMKELQPEMEKLKEASGD 419 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q LQ+ M++LYK + +NP +GC PILLQIP+FF++YKVI +++E+RHA + GWI+DL Sbjct: 420 -DRQKLQQGMMKLYKDNKVNPASGCVPILLQIPIFFSLYKVIFVTIELRHAEWMGWIRDL 478 Query: 466 AAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 +A DP++I LFG+LPF P + +G+ PII+ +SM++Q K++P P D Q MI Sbjct: 479 SAPDPSSILNLFGLLPFNTPESGSLLFILSLGVLPIILGISMWMQQKLNPAPTDPTQKMI 538 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 WMP VF+F L SF +GL++YW +N I+ QQ +IM+ G + + +R++ S+ Sbjct: 539 FAWMPWVFMFMLGSFASGLVLYWIANNTITFTQQYLIMRSQGVKPDVFGNIRASLSRKK 597 >gi|254455826|ref|ZP_05069255.1| 60 kDa inner membrane protein [Candidatus Pelagibacter sp. HTCC7211] gi|207082828|gb|EDZ60254.1| 60 kDa inner membrane protein [Candidatus Pelagibacter sp. HTCC7211] Length = 558 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 215/563 (38%), Positives = 330/563 (58%), Gaps = 7/563 (1%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 N AI+LS ++ + ++ P I + KN + + R Sbjct: 1 MDTRNVIAAISLSAAVIILYSLYFAPPPITKEQLAEKNKTEQTTDAPSLDQKETITEVSR 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 +ALS S R++ +N S+IGSI+LKGA DDL + Y++ + S+ V LLSP + K+ Y Sbjct: 61 EEALSQSKRIKFENQSIIGSISLKGAAIDDLTFKEYNVALESDEK-VKLLSPRSAKDGYL 119 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 E +++T NI++PNSN+ W++ ILT +P+KL + N I FE+ ISLD+ +LF Sbjct: 120 IESGFITTDKNIDIPNSNSEWSVSGSNILTDQSPVKLTWTNDQGITFEKEISLDDKFLFT 179 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 I V N++ + F P G+I+R + +N + + EG IA L + L+E+ Y DI++ Sbjct: 180 IKQKVINSTNKEFDFYPYGQIIRKEIPEISNFYILHEGLIATLD-EELIEEDYDDIQEEK 238 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 S WLGISDK+W + IP F + F Y A + + + S Sbjct: 239 FSKT-SQKGWLGISDKFWITSLIPPNGKEFKTTFDYKDKFRANF---VGTEPLELKGNSS 294 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 I + AK I Y + L I +F++ IDWG+ YFI KP+F + YF+ L+GN+G Sbjct: 295 IEDKLQVIVAAKRVDVIDGYAESLNIDKFDLTIDWGFLYFITKPLFYGIDYFFKLLGNYG 354 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+ T+ ++L FFPLA + S A MK +QP++ L++ K+ + LQ+ M+ LYK Sbjct: 355 LAIIAITICIRLAFFPLANFSFRSMAKMKALQPEMVRLKDLHKEDKMK-LQQEMMALYKK 413 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NP++GC PIL+QIPVFFA+YKV+ +++EMR PF+GWI+DL+ DPT++F LFG+LP Sbjct: 414 EKVNPMSGCLPILVQIPVFFALYKVLFVTIEMRQMPFYGWIQDLSERDPTSLFNLFGLLP 473 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 + +P F+ +G WPI M +SMFIQ K++P P D QA I + P+ L+ FPAGL+IY Sbjct: 474 YDVPSFLMIGAWPIAMGVSMFIQQKLNPAPTDPMQAKIFMFFPLFLTIILAPFPAGLVIY 533 Query: 542 WSWSNVISIVQQAVIMKMHGAEI 564 W+ +N++++ QQ IMK + Sbjct: 534 WTVNNILTMAQQVFIMKRTTVKT 556 >gi|114569009|ref|YP_755689.1| protein translocase subunit YidC [Maricaulis maris MCS10] gi|122316769|sp|Q0ASI6|OXAA_MARMM RecName: Full=Inner membrane protein oxaA gi|114339471|gb|ABI64751.1| protein translocase subunit yidC [Maricaulis maris MCS10] Length = 592 Score = 440 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 213/588 (36%), Positives = 346/588 (58%), Gaps = 15/588 (2%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-----YAAV 56 E N F+A+ L ++I+ +Q F + P EE E+ ++ ++ D AA Sbjct: 3 EDQRNLFIALGLILVILTGYQMFVMGPAEEERRAEQAAVEASQELADPDLPASALEPAAA 62 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 DR AL + RV + PS++GS++L GA+ DD+ LR + + ++P V LL+P + Sbjct: 63 TTVDRETALGGNQRVTIDAPSVLGSLSLTGARLDDVRLRRHTETIDDDTP-VALLNPIGS 121 Query: 117 KNAYFAELDYVSTANNI-ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + ++A + S + +LP +T W L SG LTP TPI L + + + + FER IS+D Sbjct: 122 DHVFYARDGWTSATSGFTDLPGGSTEWTLASGSTLTPDTPITLTYDSPSGLHFERVISVD 181 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++YLF + DTVTNNS ++ S G + + D ++V + Sbjct: 182 DNYLFTLTDTVTNNSGQEVELSRYGLVRHEGRPEDETRNMAVFEGALAVIDGAMVRSSFG 241 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH-ARYQAKFSANEI 294 +E + + + W+GI+ +YW + +P ++ F ++F+ + G ++A + I Sbjct: 242 KLEDGNQTEESGTGGWVGITQRYWMAAAVPDQDRPFTARFRTIERGEIDAFEASYVEQAI 301 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 + G+S+ +T +FAGAKE + + ++ I RF+M I+WGW +F+ +P L++ Sbjct: 302 AVPAGESLASTTRIFAGAKELGVLQQVQNEVGIERFDMAINWGWLWFLTRPFVWLLTMLE 361 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +G FG+AI+ T+ VK++ FPLA + Y S A MK +QPK+ E++E++ + Q Q+A Sbjct: 362 GALGQFGLAILALTLMVKIVMFPLANRAYASMAKMKAVQPKMAEIKERY-GADQQKQQQA 420 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +++LYKT INPLAGC PIL QIP+FFA+Y+ + ++EMRHAPF+GWI+DL+AADPTNI+ Sbjct: 421 LMELYKTEKINPLAGCLPILPQIPIFFALYQTLFNAIEMRHAPFFGWIRDLSAADPTNIW 480 Query: 475 TLFGILPFYLPGF------MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 LFG++P+ G + +G WPIIM L+M Q ++PPP D QA I ++P+VF Sbjct: 481 NLFGLIPYDPTGIWLIGGVLGIGAWPIIMGLTMAAQQALNPPPPDPMQARIFAFLPIVFT 540 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 F L+ F AGL+IYW+W+N +S++QQ +IM+ HG E + + + Sbjct: 541 FILAPFAAGLVIYWAWNNFLSVLQQYIIMRRHGNETQVDKLVARLLKR 588 >gi|83854933|ref|ZP_00948463.1| putative inner membrane protein translocase component YidC [Sulfitobacter sp. NAS-14.1] gi|83842776|gb|EAP81943.1| putative inner membrane protein translocase component YidC [Sulfitobacter sp. NAS-14.1] Length = 604 Score = 440 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 212/597 (35%), Positives = 331/597 (55%), Gaps = 26/597 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD--------NSY 53 ++N N A LS I++ W + P E + + Q + Sbjct: 3 DQNKNLIFATVLSFIVILGWFLLFPPPETETITDPAATQQVTDATSTEAIVPSSAGAADN 62 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 D+ AL +PR+ ++ + GSI+L G + DDL+L+ Y+ + +SPIV+LLSP Sbjct: 63 VTDASDEATAALEEAPRIPVETARISGSISLLGGRVDDLHLKDYNTTIEKDSPIVSLLSP 122 Query: 114 SNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + T +AY+A + A ++P NT+W L G+ L+ TP+ L + N LF RT Sbjct: 123 AGTPDAYYALYGWAPGAGIAPEQVPGPNTLWTLSQGETLSVETPVTLTWDNDAGQLFSRT 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 IS+DE+Y+FKI V N S + + +P G I RH + F + + + + L+E Sbjct: 183 ISIDENYMFKIEQKVENTSENTVSLAPYGLIARHGIPSDAQNFFILHEGLVAMNNGELLE 242 Query: 232 QKYSDIEKSSISNFHES-------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 + DI + + N S N W+G + Y+ + IP E KYL Sbjct: 243 TAWDDIPELDVVNGVPSKRIDGVTNGWIGFTGHYFMTNLIPDPEQPTRLTVKYLP-RTEI 301 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 +Q + T+ G++ T T LFAGAKE+ + Y + + +F IDWGWF+F+ K Sbjct: 302 FQTESVMPTQTVASGQTATVTTQLFAGAKEWEILRDY-EAQGVYKFIDSIDWGWFFFLTK 360 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F ++ + L+GN G+AI+ T+ +K L FPLA K YVS A MK +QP++++L+ K Sbjct: 361 PIFWVLHHLNLLIGNMGVAIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMEKLK-KDA 419 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q LQ+ M++LYK +NP AGC PILLQIP+FF++YKVI ++LE+RHAPF+G +D Sbjct: 420 GDDRQKLQQGMMELYKREKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHAPFFGPFQD 479 Query: 465 LAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 L+A DPT+IF +G+LP+ P + +GI P+++ +SMF+Q K++P P D Q M Sbjct: 480 LSAPDPTSIFNFYGLLPWAAPEAGTVLALVFIGILPLLLGISMFLQQKLNPAPTDPTQQM 539 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 I WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + ++ ++ + Sbjct: 540 IFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDILGNIKGSMK 596 >gi|254488170|ref|ZP_05101375.1| 60 kD inner-membrane protein [Roseobacter sp. GAI101] gi|214045039|gb|EEB85677.1| 60 kD inner-membrane protein [Roseobacter sp. GAI101] Length = 616 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 204/597 (34%), Positives = 325/597 (54%), Gaps = 28/597 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV----- 56 ++N N +A LS I++ W + P + + T ++ Sbjct: 3 DQNKNLIIATVLSFIVILGWFLLFPPPEPNTPLDGTEISATAPTDVTTPDAAVPAGTALP 62 Query: 57 -----LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + RA +L +PRV ++ L GSI+L G + DDL L+ Y + ++PIVTLL Sbjct: 63 ATTADPEETRADSLEQAPRVPVETSRLTGSISLLGGRIDDLRLKDYRTTIEDDAPIVTLL 122 Query: 112 SPSNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 SP+ T +AY+A + + A ++P NT+W+L SG L+ +P+ + + N +F Sbjct: 123 SPAGTDDAYYALYGWAAGAGIAPEQVPGPNTLWSLASGDTLSVGSPVTMTWDNGAGQVFS 182 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 R IS+DE+++F++ +V N S + +P G I RH T F + + + + L Sbjct: 183 RVISVDENFMFEVEQSVQNTSETSVTLAPYGIIARHGIPTDAQNFFILHEGMVAMNNGEL 242 Query: 230 VEQKYSDIEKSSISNFHES-------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 +E + DI S N W+G + Y+ + IP KYL Sbjct: 243 IETGWEDIPDLDPVGGVPSKRIDGVTNGWIGFTGHYFMTNLIPDPAQQSRLTAKYLP-RT 301 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 +Q + I G S + + LFAGAKE+ + Y + + +F IDWGWF+F+ Sbjct: 302 DIFQTEAVLPTQVIAAGSSASVSTQLFAGAKEWEALRDY-EAAGVYKFVDSIDWGWFFFL 360 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F ++ + L+GN G+AI+ T+ +K L FPLA K YVS A MK +QP++++L+ K Sbjct: 361 TKPIFWVLHHLNILIGNMGVAIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMEKLK-K 419 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q LQ+ M++LYK +NP AGC PI++QIP+FF++YKVI ++LE+RHAPF+G Sbjct: 420 DAGDDRQKLQQGMMELYKREKVNPAAGCLPIIMQIPIFFSLYKVIFVTLELRHAPFFGPF 479 Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 +DL+A DPT+IF +G+LP+ +P + +GI P+++ +SMF+Q K++P P D Q Sbjct: 480 QDLSAPDPTSIFNFYGLLPWGVPEAGSVMALIFIGILPLLLGISMFLQQKLNPAPTDPTQ 539 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + L+ + Sbjct: 540 QMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDLLGNITGG 596 >gi|254460224|ref|ZP_05073640.1| 60 kDa inner membrane insertion protein [Rhodobacterales bacterium HTCC2083] gi|206676813|gb|EDZ41300.1| 60 kDa inner membrane insertion protein [Rhodobacteraceae bacterium HTCC2083] Length = 601 Score = 439 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 203/603 (33%), Positives = 322/603 (53%), Gaps = 27/603 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRI------EEMNNERKNIQTVKQPNQVDNSYAA 55 ++N N +A ALS I++ W + P ++ E + ++ Sbjct: 3 DQNKNLILATALSFIVILVWFVLFPPPEPTPADPNAVISAEGDAVLPSVSAGDDADAGVN 62 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + +PR+ ++ L GSI+L G + D L L+ Y + + ++PIV LLSP Sbjct: 63 TAAAQAEEPTQDAPRIAIETGRLKGSISLLGGRIDQLALKDYRVSLDDDAPIVDLLSPVG 122 Query: 116 TKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 K+ Y+A + A ++P NT+W+ S L+ P+ L + N N + F RTIS Sbjct: 123 EKSPYYALYGWAPGAGLAFEQVPGPNTIWSAQSSGNLSVDAPVTLTWDNGNGLQFTRTIS 182 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 +DE+++F + +V N + +P G + RH F + + + D L E Sbjct: 183 VDENFMFSVAQSVENTGAGTVSLAPYGILARHGEPQNLKNFFILHEGVVAMSDGELTEID 242 Query: 234 YSDIEKSSISNFH---------ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 YSD+ ++ W+G +D+YW + IP+ F S KY D Sbjct: 243 YSDMPDFDVNPNEGARAEVTQVAEQGWVGFTDQYWMTTLIPAPGA-FKSTAKY-DDRRDI 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQ + + PG + + T LFAGAKE+ TI Y + + F IDWGWF+F+ K Sbjct: 301 YQTEAVLPTQRLAPGATASATTQLFAGAKEWATIRDY-ETAGVEGFIDSIDWGWFFFLTK 359 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F ++ Y ++GN G AI+ T +KL+ FPLA K VS A MK +QP++++++E Sbjct: 360 PIFAVLHYLNAMIGNMGWAIIGLTFLIKLILFPLAYKSNVSMAKMKALQPQMEKIKESAG 419 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q LQ+ M+ +YK +NP +GC PIL+QIP+FF++YKVI ++LE+RHAP+ GWIKD Sbjct: 420 DDK-QKLQQDMMAMYKKEKVNPASGCLPILVQIPIFFSLYKVIFVTLELRHAPWIGWIKD 478 Query: 465 LAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 L+A DP++I LFG+L F P +GI PI++ +SM++Q K++P P D QAM Sbjct: 479 LSAPDPSSILNLFGLLSFVPPEPGSILAIFSLGILPILLGISMWMQQKLNPAPTDPTQAM 538 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I WMP VF+F L +F +GL++YW +N I+ QQ +IM+ G + + +++ F + Sbjct: 539 IFAWMPWVFMFMLGTFASGLVVYWIANNTITFTQQYLIMRSQGVKPDVFGNIKAGFKRKP 598 Query: 579 NSQ 581 + Sbjct: 599 KEE 601 >gi|17984422|gb|AAL53516.1| 60 kDa inner membrane protein yidc [Brucella melitensis bv. 1 str. 16M] Length = 588 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 252/546 (46%), Positives = 354/546 (64%), Gaps = 3/546 (0%) Query: 36 ERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 + ++ AA R A++ SPR+E+ PSL GSINL GA+ DDL L+ Sbjct: 40 TPQMPANPDSIPGQGDTKAAGAPLTRDAAIAQSPRIEIDTPSLRGSINLTGARLDDLYLK 99 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 YH VS SP + LL+PS+ K YF EL + +P NTVW + LTP+TP Sbjct: 100 KYHETVSDKSPEIELLAPSSLKQGYFVELGFTGNDATGAVPGPNTVWVVEGNNKLTPSTP 159 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM-RHKPQTATNTF 214 + L + N N+ F+R IS+D+ Y+F + DT+ NN + + GR+ ++P+ A+ T+ Sbjct: 160 VTLTYTNDKNLTFKRVISVDDAYMFTVDDTIINNGGSTVSLASYGRVTRFNQPEHASATY 219 Query: 215 GVQEGFIAVLGDKSLVEQKYSD-IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + EG I V+G L E KY+ + IS W+GI+DKYWA+ IP ++ F Sbjct: 220 VLHEGLIGVMGQDGLQEIKYAKIEDNKDISFKDVIGGWVGITDKYWAATLIPPQDEKFTG 279 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 +F + ++ RYQ+ + +T+ PG+S N +FAGAK TI +YE I +F++L Sbjct: 280 RFSHFTNDRPRYQSDLLSAPLTVAPGQSQKIQNRVFAGAKVVNTIQNYETKYHIKQFDLL 339 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 IDWGWFYFI KPMF L+ + Y GNFG+AI++ TV +K LFFPLA K Y S A MK +Q Sbjct: 340 IDWGWFYFITKPMFYLIDWIYKFTGNFGVAILVVTVLLKALFFPLANKSYKSMARMKLMQ 399 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ E+REK+ + Q+AM++LYK INPLAGCWP+L+QIPVFFA+YKV+ +++EM Sbjct: 400 PKMTEIREKYADDKMK-QQQAMMELYKREKINPLAGCWPVLVQIPVFFALYKVLYVTIEM 458 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 RHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G+WPIIM + MF+QM+M+P P D Sbjct: 459 RHAPFFGWIQDLAAPDPTSIFNLFGLLPYTVPHFLMIGVWPIIMGIIMFLQMRMNPTPPD 518 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 QA I WMP++F F L+SFPAGL+IYW+W+N +SI+QQ+VIMK G +I L D L+ Sbjct: 519 PTQAAIFTWMPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSVIMKRQGVKIELFDNLKGL 578 Query: 574 FSKNYN 579 F + Sbjct: 579 FRRKPK 584 >gi|83941456|ref|ZP_00953918.1| putative inner membrane protein translocase component YidC [Sulfitobacter sp. EE-36] gi|83847276|gb|EAP85151.1| putative inner membrane protein translocase component YidC [Sulfitobacter sp. EE-36] Length = 604 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 211/597 (35%), Positives = 330/597 (55%), Gaps = 26/597 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD--------NSY 53 ++N N A LS I++ W + P E + + Q + Sbjct: 3 DQNKNLIFATVLSFIVILGWFVLFPPPETETITDPAATQQVTDATSTEAVVPSSAGAADN 62 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 D+ AL +PR+ ++ + GSI+L G + DDL+L+ Y+ + ++PIV+LLSP Sbjct: 63 VTDASDEATAALEEAPRIPVETARISGSISLLGGRVDDLHLKDYNTTIEDDAPIVSLLSP 122 Query: 114 SNTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + T +AY+A + A ++P NT+W L G+ L+ TP+ L + N LF RT Sbjct: 123 AGTPDAYYALYGWAPGAGIAPEQVPGPNTLWTLSQGETLSVETPVTLTWDNDAGQLFSRT 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLV 230 IS+DE+Y+FKI V N S + + +P G I RH P A N F + EG +A+ + L Sbjct: 183 ISIDENYMFKIEQKVENTSENSVSLAPYGLIARHGIPSDAQNFFILHEGLVAMNNGELLE 242 Query: 231 EQKYSDIEKSSISNFHES------NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 E +++ N W+G + Y+ + IP KYL Sbjct: 243 TAWDDIPELDAVNGVPSKRIDGVTNGWIGFTGHYFMTNLIPDPAQPTRLSVKYLP-RTEI 301 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 +Q + T+ G++ T T LFAGAKE+ + Y + + +F IDWGWF+F+ K Sbjct: 302 FQTESVMPTQTVARGQTATVTTQLFAGAKEWEILRDY-EAQGVYKFIDSIDWGWFFFLTK 360 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F ++ + L+GN G+AI+ T+ +K L FPLA K YVS A MK +QP++++L+ K Sbjct: 361 PIFWVLHHLNLLIGNMGVAIIGLTLLIKALLFPLAYKSYVSMAKMKELQPQMEKLK-KDA 419 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q LQ+ M++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G +D Sbjct: 420 GDDRQRLQQGMMELYKREKVNPAAGCLPILMQIPIFFSLYKVIFVTLELRHAPFFGPFQD 479 Query: 465 LAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 L+A DPT+IF +G+LP+ P + +GI P+++ +SMF+Q K++P P D Q M Sbjct: 480 LSAPDPTSIFNFYGLLPWAAPEAGTVLALVFIGILPLLLGISMFLQQKLNPAPTDPTQQM 539 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 I WMP VF+F L F +GL++YW +N I+ QQ +IM+ G + ++ ++ + Sbjct: 540 IFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSQGYKPDILGNIKGSMK 596 >gi|99080148|ref|YP_612302.1| putative inner membrane protein translocase component YidC [Ruegeria sp. TM1040] gi|122398415|sp|Q1GJX6|OXAA_SILST RecName: Full=Inner membrane protein oxaA gi|99036428|gb|ABF63040.1| protein translocase subunit yidC [Ruegeria sp. TM1040] Length = 608 Score = 437 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 214/598 (35%), Positives = 324/598 (54%), Gaps = 28/598 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY--------PRIEEMNNERKNIQTVKQPNQVDNSY 53 ++N N +A ALS +++ W F+ + E + P+ + Sbjct: 3 DQNKNLLLATALSFLVILGWYFFFPPPEEAPQPATEVTETAPQGDTTAPAAAPSAGAATA 62 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + PR+ + P + GSI+LKG + DDL L+ Y + +SPIVTLLSP Sbjct: 63 EVDAAAAETEITEDVPRLTIDTPRVEGSISLKGGRIDDLRLKDYRETLDDDSPIVTLLSP 122 Query: 114 SNTKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + +AY+A + A ++P +NT+W +G LTP TP+ L + N + F R Sbjct: 123 AGQPHAYYALYGWAPGAGLGIEDVPTANTLWQAEAGATLTPDTPVTLTWDNGKGLTFSRE 182 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 +S+DE Y+F I +VTN+S + +P G + RH F V + + D L E Sbjct: 183 VSIDEDYMFSITQSVTNSSGASVALAPYGTLARHGEPANLENFFVLHEGVVGMADGELSE 242 Query: 232 QKYSDIEKSSISN---------FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 Y D+ N W+G + YW S IP+ +F + KY + Sbjct: 243 IDYDDMTDFDPDPRDGSRAQVNTVTENGWIGFTGHYWMSTLIPAPGEAFRAIAKY-DERR 301 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 YQ +T+ G+S + LFAGAKE+ TI YE+ I F IDWGWF+F Sbjct: 302 DIYQTDVVLPTVTLAAGESTSANTQLFAGAKEWATIREYERA-GIEGFLDSIDWGWFFFF 360 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP+F ++ + +GN G+AI+ T +K+L FPLA K Y S A MK +QP++++LRE+ Sbjct: 361 TKPIFAVLHWLNAAIGNMGVAIIALTFLLKILVFPLAYKSYASMARMKELQPEMEKLRER 420 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q +QK M++LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHA F+G Sbjct: 421 AGD-DRQKMQKEMMELYKREKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAAFFGPF 479 Query: 463 KDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 +DL+ DPT++F LFG+LP+ P + +GI PI++ +SM++Q K++P P D+ Q Sbjct: 480 QDLSVPDPTSLFNLFGLLPWAAPAPDSLLSLVFIGILPILLGVSMWVQQKLNPAPTDETQ 539 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 MI WMP VF+F L F +GL++YW +NVI+ QQ +IM+ HG + ++S F Sbjct: 540 RMIFAWMPWVFMFMLGGFASGLVVYWITNNVITFTQQYLIMRSHGYTPDVFGNIKSGF 597 >gi|89053128|ref|YP_508579.1| putative inner membrane protein translocase component YidC [Jannaschia sp. CCS1] gi|122499543|sp|Q28UQ8|OXAA_JANSC RecName: Full=Inner membrane protein oxaA gi|88862677|gb|ABD53554.1| protein translocase subunit yidC [Jannaschia sp. CCS1] Length = 626 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 219/626 (34%), Positives = 336/626 (53%), Gaps = 49/626 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV------------KQPNQV 49 ++N N +A LS +++ W + P + E N Sbjct: 3 DQNRNLILATGLSFVVILVWFLLFPPPEMVEDPNAIPPAAETGGVETDTGIALTPPVTVA 62 Query: 50 DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 D A ALS + R+++ P++ GSI+L G + DDL+LR Y +V + IV Sbjct: 63 DAPAGADTTAPSEVALSEAARIDIDTPAVEGSISLLGGRIDDLSLRNYFTEVDGDQ-IVR 121 Query: 110 LLSPSNTKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 LLSP + + Y+A + + + ++P S+T W L SG ILTP +PI L + N + ++ Sbjct: 122 LLSPVGSDDPYYALYGWTPSGDLGYADVPTSDTPWELESGTILTPDSPITLAWDNGSGLI 181 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 F RTI +D+ ++F++ +V N ++ +P G + RH + F + + D Sbjct: 182 FRRTIEIDDRFMFQVTQSVENTGGAEVNLAPYGIVARHGLPSDLQNFFILHEGVVRKVDG 241 Query: 228 SLVEQKYSDIEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 L E YSD+ I E+N W+G +DKYW + IP + SF S KY+ Sbjct: 242 ELSELGYSDLPDLDIIAREGVPAEVMEVETNGWIGFTDKYWMTTLIPGENQSFVSVVKYV 301 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL------------- 325 YQ + ++I PG++ T LFAGAKE I YE Sbjct: 302 PSA-EIYQTEARLPYMSIAPGETAEVTTQLFAGAKEAEAIRDYENAEPGLIASLFGAEQD 360 Query: 326 ----AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 IPRF IDWGWFYF+ KP+F L+ + +GN G+AI+ T+ VK + FPLA + Sbjct: 361 ASRGEIPRFIDSIDWGWFYFLTKPLFWLLHWLNGAIGNMGLAIISLTLIVKAVLFPLAYR 420 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 YVS A MK +QP+I++L+E Q LQ+ M++LYK + +NP GC PILLQIP+FF Sbjct: 421 SYVSMAKMKELQPEIEKLKE-SAGDDRQKLQQGMMELYKKNKVNPAGGCLPILLQIPIFF 479 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPI 495 ++YKVI ++LE+RHAPF+GW+ DL+A D ++I L+G+LP P + +GI P+ Sbjct: 480 SLYKVIFVTLELRHAPFFGWLNDLSAPDSSSIINLYGLLPNPAPEPESIMALIFIGILPL 539 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ +SM++Q K++P P D QA I W+P VF+F L SF +GL++YW +N ++ QQ + Sbjct: 540 LLGISMWLQQKLNPAPTDAMQAQIFAWLPWVFMFMLGSFASGLLVYWIANNTLTFTQQYL 599 Query: 556 IMKMHGAEIGLIDRLRSTFSKNYNSQ 581 IM+ G + + +RS+F K + Sbjct: 600 IMRSQGFKPDVFGNIRSSFKKKAKEE 625 >gi|119383628|ref|YP_914684.1| putative inner membrane protein translocase component YidC [Paracoccus denitrificans PD1222] gi|166975878|sp|A1B0E4|OXAA_PARDP RecName: Full=Inner membrane protein oxaA gi|119373395|gb|ABL68988.1| protein translocase subunit yidC [Paracoccus denitrificans PD1222] Length = 635 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 208/619 (33%), Positives = 326/619 (52%), Gaps = 48/619 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLID- 59 + N N +A+ LS +++ W F+ P + + Q QP + + Sbjct: 3 DNNRNLILAMVLSALVMLVWSIFFAPEPVPPAQDTPAASTQGTAQPEAGGPATPGAVPQG 62 Query: 60 ---------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + + + RV +++ SL G+I+L G + DDL L GY + + SP V L Sbjct: 63 AAPELEAAAASSDPSANAGRVAIESSSLAGTISLAGGRIDDLELTGYRETLDTRSPFVRL 122 Query: 111 LSPSNT--------------------KNAYFAELDYVSTANNIE--LPNSNTVWNLISGK 148 LSP+ + Y+A ++ A +P TVW + SG Sbjct: 123 LSPTAQTTVQAEGSPVAPGGGAELAVQKPYYAVYGWMPAAGTDPALVPGPATVWEVESGA 182 Query: 149 ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208 L P P+ L + N +F RT LD+ +LF + T+ N +P G + RH Sbjct: 183 KLGPGQPVTLRWDNGAGQIFRRTYELDDKFLFTVTQTLENTGTAPFSAAPYGILARHGKP 242 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-------NFHESNSWLGISDKYWAS 261 N F + EG + + K L ++ + + + N W+G +DKYW + Sbjct: 243 DTQNFFVLHEGAVGMTDGKLLEKKYKDMTKLDPLPGEGPAELVEVQENGWIGFTDKYWMT 302 Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 P+ SF + KY G YQ + T+ PG + T++++LFAGAK + I+ Y Sbjct: 303 TLAPAPGQSFTAVAKYAP-GADIYQTEARMPVQTVAPGATGTSSSYLFAGAKVWEVINGY 361 Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 + + I RF IDWGWFYF+ KP+F L+ + + ++GN G AI+ T +KLL FPLA+K Sbjct: 362 QTNPGIDRFVDSIDWGWFYFLTKPIFRLLHWLHGMIGNMGWAIIALTFVLKLLVFPLARK 421 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Y+S A MK +QP+++ ++E+ + QK +++LYK +NP AGC P+LLQIP+FF Sbjct: 422 SYISMAKMKELQPQMEAIKERTGDDRMK-FQKEVMELYKREKVNPAAGCLPVLLQIPIFF 480 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF------MHVGIWPI 495 A+YKVI +++E+RHAP+ GWI+DLAA DP++++ LFG+LP+ PG + + I Sbjct: 481 ALYKVIFVTIELRHAPWIGWIRDLAAPDPSSLWNLFGLLPWAAPGQGSFLHSFTLPVLAI 540 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ +SM++Q K++P P D Q MI WMP VF+F L F +GL++YW +N I+I+QQ Sbjct: 541 LLGVSMWMQQKLNPAPTDPAQKMIFAWMPWVFMFMLGGFASGLVLYWITNNTITIIQQYT 600 Query: 556 IMKMHGAEIGLIDRLRSTF 574 IM MHG +RS+ Sbjct: 601 IMSMHGHRPDFFGNIRSSL 619 >gi|83313455|ref|YP_423719.1| putative inner membrane protein translocase component YidC [Magnetospirillum magneticum AMB-1] gi|82948296|dbj|BAE53160.1| Preprotein translocase subunit YidC [Magnetospirillum magneticum AMB-1] Length = 579 Score = 435 bits (1118), Expect = e-119, Method: Composition-based stats. Identities = 220/581 (37%), Positives = 330/581 (56%), Gaps = 20/581 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------------EMNNERKNIQTV 43 M N FVAIA+SV I+ WQ F+ + + Sbjct: 1 MNDQRNLFVAIAISVAILIGWQYFFPTAKPPVEQAAQQQSAEQKASAPATAPTPATASSP 60 Query: 44 KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 Q + AA RA AL S R+ ++ PS+ GSI L GA+ DD+ L Y ++ Sbjct: 61 AQVPGSPAAAAAQPAATRADALGKSRRIAIQTPSMHGSIALTGARIDDITLVKYRETPAA 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +S + L+SP+ + Y+AE +V+T N+++P ++VW LTP +P+ L + N Sbjct: 121 DSREIDLMSPAESPEPYWAEFGWVATEANVKVPGPDSVWQAQGSGPLTPASPLVLTWDNG 180 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + F RT ++DE+Y+F + V N P + R + + EG + V Sbjct: 181 EGLRFVRTYTVDENYMFGVAQRVENYGTKPASLHPYALLARTGTPHVAGMYILHEGPLGV 240 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282 +L E KY D++K S + W GI+DKYW + +P +T +F + Sbjct: 241 FD-GTLKEMKYDDLKKEGSSRHKTTGGWAGITDKYWLTALVPPAKTEITGRFVHQRLGNA 299 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 RYQ + A I PGKS LF GAK+ + Y + I RF++ ID+GWFYF+ Sbjct: 300 DRYQVDYLAPARMIEPGKSEEAGFHLFTGAKQVSLLDGYAEKFGIDRFDLAIDFGWFYFL 359 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 KP F L+ ++ +GN G+AI+ TV +KL FPLA K YV+ MK +QPK+ EL+ + Sbjct: 360 TKPFFYLLQMLHSALGNMGLAILALTVILKLAMFPLANKSYVAMGKMKKLQPKVQELQAR 419 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + LQ+ M+ LYKT +NP++GC PI++QIPVFFA+YKV+ +++EMRHAPF+GWI Sbjct: 420 YADDK-MRLQQEMMALYKTEKVNPVSGCLPIMVQIPVFFALYKVLFVTIEMRHAPFYGWI 478 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+A DPTNIFTLFG++P+ P H+G+WP+IM ++MF+Q K++P P D QA ++ + Sbjct: 479 SDLSAQDPTNIFTLFGMIPWTPPSMFHLGVWPLIMGVTMFLQQKLNPQPTDPVQAKMMQF 538 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P++F F L++F +GL+IYW+WSN +SI+QQ VIMK + Sbjct: 539 LPIIFTFLLANFASGLVIYWAWSNTLSILQQWVIMKRAEEK 579 >gi|83950483|ref|ZP_00959216.1| inner membrane protein YidC, putative [Roseovarius nubinhibens ISM] gi|83838382|gb|EAP77678.1| inner membrane protein YidC, putative [Roseovarius nubinhibens ISM] Length = 599 Score = 435 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 202/596 (33%), Positives = 321/596 (53%), Gaps = 18/596 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYV------YPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 ++N N +A LS++++ W + T P + Sbjct: 3 DQNKNLILASILSLLVIIIWTVLFPAAETDLPADTVTTTASAPAGDTALTPGSAGGEVST 62 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + RV ++ PS+ GSI+L+G + D+L L Y + + IVTLL+P+ Sbjct: 63 ETTAPAEPLPESAARVAVETPSVTGSISLRGGRLDELALNNYRESLDPGAEIVTLLNPTG 122 Query: 116 TKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + + Y+A + N+ +P +NT+W++ SG+ LTP +P+ L+++N + F R IS Sbjct: 123 SASPYYALFGWAPGTGLNSDSVPGANTLWSVESGETLTPESPVTLLWENGQGLTFRREIS 182 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 +D Y+F I TV N +P G I RH F + + D L E Sbjct: 183 VDAKYMFTIRQTVENTGDAAPVLAPYGIIARHGEPADLKNFFILHEGAVQMADGELNEID 242 Query: 234 YSDIEKSSISNF--HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 Y D E + +N W G +D YW + IP ET F + YQ Sbjct: 243 YDDFEGAGNHTPLKVATNGWTGFTDHYWMTTLIPRGETGFDLST-FQDPRRNIYQTTVKQ 301 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 IT+ PG++ T LFAGAKE+ TI +Y+ + +F IDWGWF+F+ KP+F L+ Sbjct: 302 PAITLEPGQTAEATTQLFAGAKEWETIRNYQNKGGVDKFLDSIDWGWFFFLTKPIFALLH 361 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + +GN G +I+ T+ +KL+ PLA K YVS A MK +QP++++++E+ Q L Sbjct: 362 WLNQQIGNMGWSIIALTLIIKLVLLPLAYKSYVSMAKMKELQPQMEKIKERAGD-DRQAL 420 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 QK M+ LYK +NP +GC PILLQIP+FF++YKVI ++LE+RHAP+ GWI+DL+A DP+ Sbjct: 421 QKEMMALYKKEKVNPASGCLPILLQIPIFFSLYKVIFVTLELRHAPWIGWIRDLSAPDPS 480 Query: 472 NIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 +++ L+G+LP+ P + +GI P+++ +SM++Q K++P P D Q M+ WMP Sbjct: 481 SLYNLWGLLPWNAPEPGSLLALIFIGILPLLLGISMWLQQKLNPAPTDPTQKMVFAWMPW 540 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +F+F L SF +GL++YW +N I+ QQ IM+ G + + ++S F + + Sbjct: 541 IFMFMLGSFASGLVVYWIANNTITFTQQYAIMRSQGYKPDVFGNIKSGFKRTRKTD 596 >gi|56695446|ref|YP_165794.1| putative inner membrane protein translocase component YidC [Ruegeria pomeroyi DSS-3] gi|81676422|sp|Q5LW11|OXAA_SILPO RecName: Full=Inner membrane protein oxaA gi|56677183|gb|AAV93849.1| inner membrane protein YidC, putative [Ruegeria pomeroyi DSS-3] Length = 609 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 211/608 (34%), Positives = 336/608 (55%), Gaps = 31/608 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYAA 55 ++N N +A ALS +++ W + P E +QT + Sbjct: 3 DQNKNLILATALSFLVILVWFILFPPPEQTEAPATEIATTNGTAVQTPTAAATEGGAGEV 62 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 +D A + +PRV++ P L GS++L G + D+L+L+ Y + + ++ IV +L+P+ Sbjct: 63 PALDSAAPTQAEAPRVQIDTPRLKGSVSLLGGRIDELSLKDYRVSLDEDAEIVEMLTPAG 122 Query: 116 TKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + +AY+A + A N ++P T W+L SG L+ TP+ L + N + + F RT++ Sbjct: 123 STSAYYALYGWAPGAGLNAADVPGPLTEWSLESGDTLSVGTPVTLSWSNGSGVTFRRTLA 182 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV-----LGDKS 228 +DE Y+F + +V N S I +P G + RH + G++ FI + D + Sbjct: 183 VDEDYMFTVTQSVENGSAAPIGAAPYGILARHGIGEDADLPGLKNFFILHEGVVAMNDGT 242 Query: 229 LVEQKYSDIEKSSISNF---------HESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 L E Y D+ K I ++S+ W+G +D YW + IP T+F S KY Sbjct: 243 LSEIDYKDVRKFDIDPNEGAQAEVFQNKSDGWIGFTDHYWMATLIPGSGTAFKSAAKY-D 301 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 YQA+ +++ PG+S T LFAGAKE+ +I Y++D + +F IDWGWF Sbjct: 302 ARRKIYQAETVLPTMSVAPGESAEVTTRLFAGAKEWESIRAYQQD-GVQKFLDSIDWGWF 360 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +F+ KP+F L+ L+GN G +I+ T+ +K + FPLA K YVS A MK +QP+++ L Sbjct: 361 FFLTKPIFWLLHQINGLIGNMGWSIIGLTLIIKAIVFPLALKSYVSMAKMKELQPQMEAL 420 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E Q +Q+ M++LYK +NP AGC PILLQIP+FF++YKVI +++E+R AP++ Sbjct: 421 KEAAGD-DRQKMQQGMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRQAPWF 479 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL------SMFIQMKMSPPPAD 513 G +DL+ DPT+I FG LP+ P + +I L SM++Q K++P P D Sbjct: 480 GPFRDLSMPDPTSIMNFFGWLPWAGPEAGSLTATILIGILPLLLGISMWLQQKLNPAPTD 539 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 QAMI WMP VF+F L SF +GL++YW +N I+ QQ +IM+ HG + + ++S Sbjct: 540 PTQAMIFAWMPWVFMFMLGSFASGLVVYWIANNTITFTQQYIIMRSHGYKPDVFGNIKSG 599 Query: 574 FSKNYNSQ 581 F++ + Sbjct: 600 FARRAKAD 607 >gi|149913108|ref|ZP_01901642.1| 60 kDa inner membrane insertion protein [Roseobacter sp. AzwK-3b] gi|149813514|gb|EDM73340.1| 60 kDa inner membrane insertion protein [Roseobacter sp. AzwK-3b] Length = 604 Score = 434 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 211/603 (34%), Positives = 327/603 (54%), Gaps = 26/603 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN-------SYA 54 ++N N +A ALS +++ W + P + + + + + A Sbjct: 3 DQNKNLILATALSFVVILVWFVLFPPPEPPQQDATTPEAASQVDGSATAPLTATAPATGA 62 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 +PRV + PSL GSI+LKG + D L+L+ Y + S VTLLSP Sbjct: 63 TAGTPAPEAEEPEAPRVAISTPSLDGSISLKGGRIDQLSLKNYRETLEPGSDTVTLLSPI 122 Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 T +AY+A + +P +NTVW + SG L+P TP+ LV+ N + F R I Sbjct: 123 GTDSAYYALFGWAPGQGLTAETVPGANTVWKVESGDQLSPETPVTLVWDNQQGLTFRREI 182 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 S+D+ ++F + +V N D +P G + RH F + + D L E Sbjct: 183 SVDDKFMFTVTQSVENTGADTPSLAPYGILARHGEPVDLKNFFILHEGGIRMVDGQLSEI 242 Query: 233 KYSDIEKS--SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 Y D E + + + W G +D YW + IPS + + F+ YQ Sbjct: 243 DYDDFEPASNHETLTVNESGWTGFTDHYWMTTLIPSMAGAQVTTFQ--DTRRNIYQTTVR 300 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 N T+ PG+S T T LFAGAKE+ TI +Y+ + I RF IDWGWF+F+ KP+F ++ Sbjct: 301 KNTETVAPGQSATVTTRLFAGAKEWETIRNYQNEDGIDRFLDSIDWGWFFFLTKPIFAVL 360 Query: 351 SYF------YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + + G+ G AI+ T+ +K L PLA K YVS A MK +QP++++++E Sbjct: 361 HWLNVTLAGMGIAGSMGWAIIGLTLLIKALLLPLAYKSYVSMAKMKELQPQMEKIKE-SA 419 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 + Q LQK MI+LYK +NP +GC PILLQIP+FF++YKVI ++LE+RHAP+ GWI D Sbjct: 420 GNDRQKLQKEMIELYKKEKVNPASGCLPILLQIPIFFSLYKVIFVTLELRHAPWIGWIDD 479 Query: 465 LAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 L+A DP++++ L+GILP+ P + +GI P+++ +SM++Q K++P P D Q M Sbjct: 480 LSAPDPSSLYNLWGILPWAAPEPGSIIALIFIGILPLLLGISMWLQQKLNPAPTDPTQQM 539 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I WMP VF+F L SF +GL++YW +N+I+ QQ +IM+ G + ++ + S+ + Sbjct: 540 IFAWMPWVFMFMLGSFASGLVVYWIANNMITFAQQYLIMRSQGYKPDVLGNILSSMKRKP 599 Query: 579 NSQ 581 ++ Sbjct: 600 KTE 602 >gi|254450534|ref|ZP_05063971.1| 60 kD inner-membrane protein [Octadecabacter antarcticus 238] gi|198264940|gb|EDY89210.1| 60 kD inner-membrane protein [Octadecabacter antarcticus 238] Length = 593 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 199/595 (33%), Positives = 320/595 (53%), Gaps = 21/595 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ-------TVKQPNQVDNSYA 54 ++N N +A ALS I++ W + P + E + Q + A Sbjct: 3 DQNKNIILATALSFIVILTWFVLFPPPEVAEQAPTTEITTTDGTTLGVDAQIPEQVGEVA 62 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + ++ +PR+ + + SL GS++L G + DDL+L+GY + ++ +V LLSP Sbjct: 63 VLAPLSAEDVIADAPRLVIDSESLTGSLSLTGGRIDDLSLKGYRETLKPDADLVRLLSPI 122 Query: 115 NTKNAYFAELDYVST--ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 T + Y+A +V+ A ++P ++T W + SG+ L+P + + LV+ N + F +T Sbjct: 123 GTDSPYYALHGWVAAVGATADQVPGASTQWQIESGETLSPGSDVTLVWGNGAGLTFRKTF 182 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV-- 230 ++DE +LF + TV N + +I P G + RH F EG + + Sbjct: 183 AVDEEFLFTVTQTVENTTGAEIALRPYGLVARHGEPDQIGFFIQHEGVVRMSDGSMEEIN 242 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 D+ N W+G SD+YW + IP+ F S K+ +D YQ + Sbjct: 243 YDDMPDLTTEESRIEVTENGWIGFSDQYWMTALIPTPGRDFRSTAKFAND---IYQIETV 299 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 IT+ PG + + FAGA+E+ I Y+ DL I RF IDWGWF+F+ KP+F ++ Sbjct: 300 YPMITVAPGATASADTQFFAGAQEWEVIRSYQNDLGIDRFLDSIDWGWFFFLTKPIFAML 359 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + L+GN G +I+ T +K L PLA K YVS A M+ +QP++ +L+E + Sbjct: 360 HWLNGLIGNMGWSIICLTFVIKALLLPLAYKSYVSMAKMRELQPEMAKLKEAAGDDREK- 418 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 LQK M+ LYK + +NP +GC PIL+QIP+FF++YKVI +++E+RHAP+ GW+ DL+A D Sbjct: 419 LQKGMMSLYKENKVNPASGCLPILMQIPIFFSLYKVIFVTIELRHAPWIGWVNDLSAPDT 478 Query: 471 TNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 + ++ LFG+LP+ P +G+ PI++ +SM++Q K++P P D Q MI WMP Sbjct: 479 STLYNLFGLLPWGAPEPDSILALAFIGVMPIVLGISMWLQQKLNPAPTDATQKMIFAWMP 538 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 VF+F L F +GL++YW +N I+ +QQ IM+ G + L + + Sbjct: 539 WVFMFMLGGFASGLVLYWIANNSITFMQQYAIMRSQGFKPDLFGNITGRKKPDPE 593 >gi|300024925|ref|YP_003757536.1| membrane protein insertase, YidC/Oxa1 family [Hyphomicrobium denitrificans ATCC 51888] gi|299526746|gb|ADJ25215.1| membrane protein insertase, YidC/Oxa1 family [Hyphomicrobium denitrificans ATCC 51888] Length = 624 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 243/603 (40%), Positives = 354/603 (58%), Gaps = 31/603 (5%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------------------EMNNERKN 39 N A+ALS++++ WQ F+ P ++ N Sbjct: 9 DQNNLMFAVALSILVLMGWQYFFARPELQNEHARQEFNKKIEAQNKDGSSETPPNVASTP 68 Query: 40 IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 + A R AL S R++++ PSL GSI+LKG + DDL L Y Sbjct: 69 VAPPSTDAPTGAQAPATAPVSREAALQGSQRLKIETPSLEGSIDLKGGRLDDLVLMKYRE 128 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANN-IELPNSNTVWNLISGKILTPTTPIKL 158 V NS V LLSPS + YFAE +V + + +++P +++W + SG LTP TP+ L Sbjct: 129 TVDPNSARVILLSPSGSPEPYFAEYGWVPQSGSAVKVPTRDSLWTVESGTRLTPETPVTL 188 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 ++ N ++F RT+S+D Y+FKI D + N + ++ P R+ R + + + E Sbjct: 189 MWDNGGGLVFHRTVSVDNDYMFKIKDEIENKTQAEVTLLPYARVHRSGHPPSQAFYVLHE 248 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESN--SWLGISDKYWASVFIPSKETSFHSQFK 276 G + V GD L E ++D KS + ++ WLGI+DKYWA+ +P + + + + Sbjct: 249 GLVGVSGDHGLQEFTFADALKSGVPTTFDNVTGGWLGITDKYWATALVPEQSEPYRAMYS 308 Query: 277 Y----LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 G +Q + +++ G LFAGAK+ I YE L I RF+ Sbjct: 309 ALKARDPAGKDAFQTDYLRGALSVPAGLRKGVEGHLFAGAKQASLIDGYENALGILRFDR 368 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +IDWGWFYFI +P+F LM + LV NFGI I++ TV VK F+PLA KQY S A MK + Sbjct: 369 MIDWGWFYFITRPLFRLMEFINGLVHNFGITILILTVLVKAAFYPLANKQYESMARMKKL 428 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP++ ++E++K Q QK + +LY+T INPLAGCWPILLQIPVFFA+YKV+ ++++ Sbjct: 429 QPEMQRIKEQYKD-DTQRQQKEIFELYRTQKINPLAGCWPILLQIPVFFALYKVLFVTID 487 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI DL+A DPT++F LFG+LPF P F+H+G+WP+IM ++M++QM+++PP Sbjct: 488 MRHAPFFGWIHDLSAPDPTSLFNLFGLLPFDSPTFLHIGVWPLIMGVTMWMQMQLNPPQP 547 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D Q I WMPVVF F L+SFPAGL+IYW+WSN +SI+QQ I K +GAE+ L+D ++ Sbjct: 548 DPIQQQIFQWMPVVFTFMLASFPAGLVIYWAWSNTLSILQQVRINKKNGAEVHLLDNIKR 607 Query: 573 TFS 575 TF Sbjct: 608 TFR 610 >gi|315122061|ref|YP_004062550.1| putative inner membrane protein translocase component YidC [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495463|gb|ADR52062.1| putative inner membrane protein translocase component YidC [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 578 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 442/581 (76%), Positives = 499/581 (85%), Gaps = 3/581 (0%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME+NWNYF AIA+SV IVY WQ YV PRIE + +K T+++ + V ID+ Sbjct: 1 MEKNWNYFAAIAISVAIVYVWQLVYVQPRIEAIKEGKKTPLTIEKQSI---QNTIVPIDN 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 RAQALS SPRVE+ +PSL GSINLKGAQFDDL+L+GY +DVS NSP+V LL+P NT+NAY Sbjct: 58 RAQALSRSPRVEINSPSLAGSINLKGAQFDDLSLKGYRVDVSRNSPMVALLNPLNTENAY 117 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 FAEL+Y+ST N PN NTVWNL+SG++LTP++PIKL FK+ANNILFER ISLDE+YLF Sbjct: 118 FAELNYISTTNTTVFPNENTVWNLVSGQVLTPSSPIKLAFKSANNILFERIISLDENYLF 177 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 IVDT+TNN + I FSP G+I R+K Q +N+FGVQEGFIAVLGD+SL+E+KYSDIEKS Sbjct: 178 TIVDTITNNGTNLISFSPYGKITRYKLQKESNSFGVQEGFIAVLGDQSLIEKKYSDIEKS 237 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 S+SNFHESNSWLGISDKYWAS FIP KE SF S+F Y SDG ARYQA F NEI + PGK Sbjct: 238 SVSNFHESNSWLGISDKYWASAFIPPKEKSFQSRFDYFSDGRARYQANFKINEIILSPGK 297 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 S TTN LF GAKE P I HYEK+L IPRFEMLIDWGWFYFIAKPMF LMSYFYNLVGNF Sbjct: 298 STKTTNSLFVGAKELPIIQHYEKELEIPRFEMLIDWGWFYFIAKPMFALMSYFYNLVGNF 357 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 GIAIMLTT+FVK LFFPLAKKQYVSTANMKNIQPKID LREKFKQ+ PQVLQK M+QLYK Sbjct: 358 GIAIMLTTIFVKALFFPLAKKQYVSTANMKNIQPKIDALREKFKQASPQVLQKEMLQLYK 417 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 TH INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF+GWI+DLAA DPTNIFTLFGIL Sbjct: 418 THKINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFFGWIQDLAAPDPTNIFTLFGIL 477 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 PF LP F+HVGIWPIIMSLSMF+Q+KMSPPP DKGQA++LNWMPVVFVFALSSFPAGLII Sbjct: 478 PFQLPEFIHVGIWPIIMSLSMFLQLKMSPPPTDKGQAIVLNWMPVVFVFALSSFPAGLII 537 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 YWSWSN+ISI+QQ VIMKM+GA+I +IDRLRS F+K+ NS+ Sbjct: 538 YWSWSNIISIIQQTVIMKMYGAKIDIIDRLRSMFAKSSNSK 578 >gi|288957364|ref|YP_003447705.1| preprotein translocase YidC subunit [Azospirillum sp. B510] gi|288909672|dbj|BAI71161.1| preprotein translocase YidC subunit [Azospirillum sp. B510] Length = 577 Score = 430 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 216/579 (37%), Positives = 324/579 (55%), Gaps = 19/579 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE---------------EMNNERKNIQTVKQ 45 M N +AIALS+ I+ +Q FY PR+E + + Sbjct: 1 MTDQRNLIIAIALSIAILLGFQYFYEKPRVEQQKQLAAQQAAQTEQSVPVPAPGVPAQLP 60 Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A A+ ++ RV++ P+L GS+NL G + DDL L YH S Sbjct: 61 SGMSTAEVAKERPVLLAEQMAAGTRVKIDTPALHGSVNLVGGRIDDLTLAQYHETPDPKS 120 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 P + LL+P+ T AY+AE +V + P + T W G LTP P+ L + N Sbjct: 121 PEIVLLAPAGTPAAYYAEFGWVPQGAGVATPTATTRWT-ADGAALTPEKPLTLSWDNGQG 179 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 ++FER I++D ++F + TV N + P + R + + + EG + V Sbjct: 180 LVFERKIAVDPDFMFTVTQTVRNTGAAPVTLLPYSLVSRSGTPHTSGYYILHEGPLGVFN 239 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHAR 284 SL E+KY D+ K+ + W+GI+DKYW +P ++F Y R Sbjct: 240 -GSLTEEKYDDVRKAGSIAKDTTGGWIGITDKYWLVSLVPDPSEKVTARFLYNQVANADR 298 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 YQ +T+ PG S T LFAGAK+ + Y + L I F++ ID+GWFYF+ K Sbjct: 299 YQTDTMGAPVTVAPGASAENTGRLFAGAKQVKLLDGYSEKLNIKNFDLAIDFGWFYFLTK 358 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P F + + ++GNFGIAI++ TV VK +FFPLA K Y + + MK +QPK+ ELREKF Sbjct: 359 PFFYALDFLGRIIGNFGIAILVLTVCVKAVFFPLANKSYQAMSKMKALQPKMQELREKFS 418 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 + + ++ LYK ++P++GC PI++QIPVFF++YKV+ +++EMRHAPF+GWI D Sbjct: 419 D-DQARMNQELMALYKREKVSPVSGCLPIVIQIPVFFSLYKVLFVTIEMRHAPFFGWIHD 477 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L++ DPT IF LFG++P+ P +H+G+WP+IM ++M+ Q KM+P P D QA + ++P Sbjct: 478 LSSPDPTTIFNLFGLIPWDPPAMLHLGLWPLIMGVTMWFQQKMNPAPPDPVQAKVFQFLP 537 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +VF F L+ FPAGL+IYW+W+N +S++QQ IMK G + Sbjct: 538 IVFTFMLAGFPAGLVIYWAWNNTLSVLQQWTIMKRMGVK 576 >gi|315498839|ref|YP_004087643.1| membrane protein insertase, yidc/oxa1 family [Asticcacaulis excentricus CB 48] gi|315416851|gb|ADU13492.1| membrane protein insertase, YidC/Oxa1 family [Asticcacaulis excentricus CB 48] Length = 658 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 216/610 (35%), Positives = 349/610 (57%), Gaps = 32/610 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE---RKNIQTVKQPNQVDNSYAAVLI 58 + N N F+ +ALS+ I++ +Q F P++E+ +K I+ K P S Sbjct: 4 DDNRNMFIFLALSMAILFGYQFFVAGPQMEKERAAAMAQKKIEAAKSPVATPESLFVEGK 63 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R QA++ +PRV + +P+L GS++L GA+ DDL L+ Y + ++SP V L P ++ Sbjct: 64 LPRDQAVAATPRVAIDSPALKGSLSLAGARIDDLFLKQYKETLKADSPNVELFRPQGAEH 123 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 AY+AE +V AN LP+ N+VW ++SG +L+P + L + + FER +SLD+ Y Sbjct: 124 AYYAESGWVG-ANVPGLPSGNSVWTVVSGSVLSPGKDVVLGYDAGTGLRFERRLSLDDKY 182 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGD------KSLVE 231 + + DTV N + + +P ++R P+T + EG I + E Sbjct: 183 MITVTDTVVNTTGAAVTLAPYANVVRQGAPETLGKNMILHEGGIGAFSKDATGKGYTTPE 242 Query: 232 QKYSDIEKSSISNFHE---SNSWLGISDKYWASVFIPSKETSFHSQFKYLS-------DG 281 K+ + EK + + W+G++DKYW + IP ++ H+ K D Sbjct: 243 FKFHNWEKDEKKANFKADSTGGWMGLTDKYWLAAVIPDQKAKIHASMKATDQTTANEKDF 302 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + YQA + A+ +T+ PGK ++ T +FAGAK+ + Y+ L +P F+ IDWG F+F Sbjct: 303 NFLYQAGYVADAVTVQPGKPVSVTYHIFAGAKQASLLAAYQDKLKLPAFDKAIDWGMFWF 362 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +PMF ++ + + VGNFG+AI+ TV VKL+FFPLA K Y S MK +QP+++EL++ Sbjct: 363 FTRPMFFVLDFLFKYVGNFGLAILGLTVLVKLIFFPLAHKSYESMTKMKMLQPQVEELKK 422 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K + +P Q+ M+ LY+ +NP++GC PI +Q+PVF+A+YKV+ +++EMRHAPF+GW Sbjct: 423 KHEGNPQQMQI-EMMGLYQKEKVNPMSGCLPIFVQMPVFYALYKVLFVTIEMRHAPFFGW 481 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGF----------MHVGIWPIIMSLSMFIQMKMSPPP 511 I+DL+ DPT +F LFG+LP+ +H+GI P++ SM++ M+PP Sbjct: 482 IQDLSDKDPTTMFNLFGLLPYDPAALPVIGGLMATSLHIGILPLLYGASMWLSQSMNPPM 541 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D Q I +MPV+F F ++ F +GL+IYW W+NV+++ QQ ++M+ G E + L Sbjct: 542 PDPMQRKIFAFMPVMFTFIMAPFASGLLIYWIWNNVLTVAQQYMLMRQMGVENPIDTLLG 601 Query: 572 STFSKNYNSQ 581 S+ Sbjct: 602 KVAKTKPKSE 611 >gi|323137577|ref|ZP_08072654.1| membrane protein insertase, YidC/Oxa1 family [Methylocystis sp. ATCC 49242] gi|322397203|gb|EFX99727.1| membrane protein insertase, YidC/Oxa1 family [Methylocystis sp. ATCC 49242] Length = 591 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 237/591 (40%), Positives = 345/591 (58%), Gaps = 17/591 (2%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID-- 59 E N +A ALS+I + W FY +P +++ + + + ++ A Sbjct: 3 ENTKNMLLAAALSLIFIGLWDYFYAFPEMDKQKKALSEQERMAKIPKLGAPEKAAAAAKP 62 Query: 60 ---DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 R AL++SPRV + S+ GSI LKGA+ DD++L+ YH V SPI+TLLSP Sbjct: 63 VVRSREAALALSPRVAIDTKSISGSIALKGARVDDVSLKNYHQTVDPRSPIITLLSPEEG 122 Query: 117 KNAYFAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 Y+AEL Y+S N + + LT + P+ L + N ++F+R IS+D Sbjct: 123 PEPYYAELGYLSAETENAPVLPNTETLWTADADKLTTSQPVTLSWDNGQGLVFKRVISID 182 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + YL + D+V N + R+ R + + EGF+ V+GD E Y Sbjct: 183 DEYLLTVKDSVENKGGKPVTLYSYSRVSRVGHPPSAGYAALHEGFVGVIGDTG-QELTYD 241 Query: 236 DIEKSSI--SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR-YQAKFSAN 292 IEK F W+G +DKYW +V P + +++ + G + YQA + Sbjct: 242 KIEKEPNATKTFKGVGGWVGFTDKYWGAVVAPDQNAPMEARYMLMGGGPVKTYQADTVSE 301 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 T+ P S TT ++FAGAKE T+ Y+ + + RF++LIDWGWFYFI +PMF L+ + Sbjct: 302 PKTLEPNASTATTTYVFAGAKEVDTLDAYKANPGLKRFDLLIDWGWFYFITRPMFRLIDF 361 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 Y ++GNFG+AI+ TV VK F PLA K Y S A MK IQPKI EL+EK+ + Sbjct: 362 LYRVLGNFGLAILAVTVIVKAAFLPLANKSYKSIAKMKEIQPKIKELKEKYGDDKHK-FN 420 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 ++LYK +NP +GC P+LLQIPVFF++YKV+ +++EMRHAPF+GWIKDL+A DPTN Sbjct: 421 MEQMELYKREKVNPASGCLPVLLQIPVFFSLYKVLVVTIEMRHAPFFGWIKDLSAPDPTN 480 Query: 473 IFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 +F LFG++P+ ++ +G+WP++M ++M++QMKM+P P D+ Q + WMPV+ Sbjct: 481 VFNLFGLIPWDPTHVAIFGPYLALGVWPLVMGVTMWLQMKMNPEPTDEIQKTMFAWMPVM 540 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 F F + SF +GLIIYWSW+N++SIVQQ VIMK G + L D LR TFS+ Sbjct: 541 FTFTMGSFASGLIIYWSWNNLLSIVQQGVIMKRAGVKFELWDNLRKTFSRA 591 >gi|40062654|gb|AAR37575.1| inner membrane protein, 60 kDa [uncultured marine bacterium 313] Length = 560 Score = 428 bits (1100), Expect = e-117, Method: Composition-based stats. Identities = 206/565 (36%), Positives = 327/565 (57%), Gaps = 8/565 (1%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N +AI LS +++ W F+ P +E E + ++ + + + Sbjct: 1 MDF-KNVLIAIVLSTLVLVFWATFFEPPPVERQIVEDQITKSEEPSSPSIEKVELSKKIE 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 R A+ RV+++N ++ GSI+L+GA DD+ + Y + S+ V L+P ++ Y Sbjct: 60 RNDAIDSVARVKIENNNIKGSISLQGAIIDDIIFKNYKESLESDQK-VIFLNPKSSDEGY 118 Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 + E + S +N ++LP NT+W + K+LTP PI L + N ++F + I LD+ YL Sbjct: 119 YIETGWASNSNEKLKLPLDNTIWKVKGNKVLTPNNPIVLEWDNNEGLIFTKKIELDDKYL 178 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 FKI + N S F P +I R+ + + EGFI + D L E+ Y D+E Sbjct: 179 FKISQGIKNTSNKSYEFFPYAQITRNYKPDVIPIYILHEGFIGMFDD-ELKEEDYKDVED 237 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + S WLGI+DKYW + +P K F S+F + + + Sbjct: 238 EKFI-INSSKGWLGITDKYWLTAIVPEKGKKFKSEFLSIDGKYKANFI--IKEPTVLSSN 294 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 SIT F AKE I Y + L+I +F++ IDWGWFYFI KP+F ++ YF+ L GN Sbjct: 295 ASITNEINAFVMAKEVAVIDGYAERLSIEKFDLTIDWGWFYFITKPLFFVIEYFFKLTGN 354 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 FG+AI++ T V+++FFPL+ + S A MK +QP++ L+E K + LQ+ M+ LY Sbjct: 355 FGVAIIILTALVRIVFFPLSNYSFRSMAKMKILQPEMIRLKELHKDDKTK-LQQEMMALY 413 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NP++GC P+L+QIP FFA+YK++ +++EMR PF+GWI+DL+A DPT+IF LFG+ Sbjct: 414 KREKVNPISGCLPVLIQIPFFFAVYKMLYVTIEMRQQPFFGWIQDLSARDPTSIFNLFGL 473 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 +P+ P F+ +G+WPI+M L+MF+Q K++P P D QA I ++P+ L+ FP+GL+ Sbjct: 474 IPWDPPTFLMIGVWPILMGLTMFLQQKLNPTPPDPMQAKIFMFLPIFLTIILAPFPSGLV 533 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEI 564 +YW+ SNV+++ QQ VI++ + Sbjct: 534 VYWTISNVLTMAQQWVIIRGTKVKT 558 >gi|114327390|ref|YP_744547.1| 60 kDa inner membrane protein YIDC [Granulibacter bethesdensis CGDNIH1] gi|122327634|sp|Q0BU78|OXAA_GRABC RecName: Full=Inner membrane protein oxaA gi|114315564|gb|ABI61624.1| 60 kDa inner membrane protein YIDC [Granulibacter bethesdensis CGDNIH1] Length = 578 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 212/581 (36%), Positives = 315/581 (54%), Gaps = 15/581 (2%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK-QPNQVDNSYAAVLIDD 60 F+AIA+S+ I+ +Q Y + E R + +PN + Sbjct: 1 MDQKRLFLAIAISLGILLGFQGLYRHFVPEPPAAARTATNAGQGKPNNTLGAVPTDATAS 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ++ R+ + P + GSI+L GA+FDDL LR YH V NSP+V LL+P + Y Sbjct: 61 QSPPPKEGARLAVDAPRVKGSISLVGARFDDLVLRDYHETVDKNSPLVRLLAPLSGDEPY 120 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 + E +V + I P +T W LTP P+ L + N + F +++D Y+F Sbjct: 121 YVEYGWVPEESGIATPGRDTEWK-ADAATLTPNKPVTLSWDNGAGLTFMLKVAVDADYMF 179 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + +V N + + P R+ R + EG I V+ L E Y + Sbjct: 180 SVTQSVRNTTGKPVVLHPYARVRRDYRPEVEGYTVLHEGLIGVVDGI-LHEITYKSADSD 238 Query: 241 SISN------FHESNSWLGISDKYWASVFIPSKETSFHSQFK-YLSDGHARYQAKFSANE 293 N + W GI+DKYW + IP + TS F+ +G YQ ++ Sbjct: 239 GAKNNGLAFEHASTGGWAGITDKYWLTALIPDQITSVDFSFRDTKPNGRDGYQVGIISHN 298 Query: 294 ITI-LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 G +T LFAGAK + HY+ + IP F +D+GWF+FI +P F + + Sbjct: 299 PDQVAAGAESASTTHLFAGAKVVSLLDHYQAEYHIPSFWEAVDFGWFWFITRPFFYALDW 358 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 Y+LVGNFG+AI++ TV VK F+PLA K Y S + M+ + PKI LRE++K P +Q Sbjct: 359 LYHLVGNFGVAILIFTVLVKAAFYPLASKSYRSMSKMRLLAPKIQSLRERYKD-DPTRMQ 417 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + ++QLYK NP +GC P+LLQ P+FF++YKVI +++EMRHAPF+GWI DL+A DPTN Sbjct: 418 QEVMQLYKAEGANPASGCLPMLLQFPIFFSLYKVIFVTIEMRHAPFFGWIHDLSAVDPTN 477 Query: 473 IFTLFGILPFYL---PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 +F LFG+LPF F+H+GIWP+IM +M++Q KM+PP D QA + +MP++F F Sbjct: 478 LFNLFGLLPFDPTHISPFLHLGIWPLIMGGTMYLQQKMNPPMPDPVQARMFQFMPIIFTF 537 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 L+ FP GL+IYWSW+N++SI QQ +I + + ++ Sbjct: 538 MLARFPVGLVIYWSWNNLLSIGQQWLIQRRTKLPRPELAKV 578 >gi|163868925|ref|YP_001610152.1| putative inner membrane protein translocase component YidC [Bartonella tribocorum CIP 105476] gi|161018599|emb|CAK02157.1| translocase precursor subunit [Bartonella tribocorum CIP 105476] Length = 620 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 252/612 (41%), Positives = 366/612 (59%), Gaps = 32/612 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE--------------------MNNERKNI 40 ME N N+F+AI LS +++ AWQ +V P+ + + Sbjct: 1 MEYNRNFFIAIGLSFLVLIAWQFLHVAPKQAKLQNQQAITQQQQLSKQQSPLSSATVNFS 60 Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 + + R L+ + R+ +K L GSINL GAQFDDL+L+ Y + Sbjct: 61 DDTSTHPSTSIIEQPMTPEVRKAVLAKTERIAIKTNELEGSINLVGAQFDDLHLKKYRVT 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKIL-TPTTPIKL 158 V SP + LL+P K Y AE + S + + LP +T W + TP+TPI L Sbjct: 121 VDKKSPEIDLLNPKGFKTTYLAEFGFASASLPAKALPQPDTQWQIEGNNTTLTPSTPITL 180 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 ++ N +F RT+ +D++Y+F I D+++N S I S R+ R P TN + Sbjct: 181 IYNNGQGQIFRRTLFVDDYYMFTIEDSISNESDQPIYLSSYARVARAAPPEHTNATYLLH 240 Query: 219 GFIAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 + + SL +KY D + S++ + W+GI+DKYWA IP ++ Sbjct: 241 EGMIGIAGDSLKTEKYKTLAELDPNPDNGQKSMTFSKVTGGWIGITDKYWAVAVIPQQDK 300 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + S+F Y YQ+ + +TI P ++ T TN LFAGAK+ I+HY+ +L I + Sbjct: 301 EYTSRFIYFDRLQTHYQSDLLGSLLTIAPNETKTVTNHLFAGAKQVEIINHYQNNLKINK 360 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F +LIDWGWF FI KPMF L+ Y GNFGIAI+L TV +K+L FPLA K Y S A M Sbjct: 361 FALLIDWGWFDFITKPMFALIDILYKQTGNFGIAILLVTVLLKILLFPLANKSYQSMARM 420 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K +QP++ E++EK+ + Q+A+I+LYKT INPLAGCWP+L+Q P+FFA+YKV+ I Sbjct: 421 KLLQPRLLEIKEKYPDDKNK-QQQAIIELYKTEKINPLAGCWPMLVQFPIFFALYKVLYI 479 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 ++EMRHAPF+GWI+DLAA DPT++F LFG+LP+ P F+ +G WP+IM ++MF+QM+M+P Sbjct: 480 TIEMRHAPFFGWIQDLAAPDPTSLFNLFGLLPYTTPAFLMIGAWPLIMGITMFLQMRMNP 539 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D+ QAMI WMPVVF F L+SFP GL+IYW+W+N++SI+QQ ++MK GA+I L D Sbjct: 540 APQDQTQAMIFTWMPVVFTFMLASFPVGLVIYWAWNNILSIIQQGIMMKRQGAKIELFDN 599 Query: 570 LRSTFSKNYNSQ 581 L++ + K+ + Sbjct: 600 LKTMWKKSPKKE 611 >gi|296444656|ref|ZP_06886620.1| membrane protein insertase, YidC/Oxa1 family [Methylosinus trichosporium OB3b] gi|296257924|gb|EFH04987.1| membrane protein insertase, YidC/Oxa1 family [Methylosinus trichosporium OB3b] Length = 610 Score = 427 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 234/613 (38%), Positives = 346/613 (56%), Gaps = 37/613 (6%) Query: 1 MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA---- 55 M N +A LS++ + AW FY +P++E+ + Q + Sbjct: 1 MNEYTKNVIIAAGLSMLFIGAWDYFYAFPKLEQERQTQAEQIKKTAQAQAPAARKPAAPE 60 Query: 56 -------------------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 + R AL+ SPR+ + PS+ GSI L G + DD++L+ Sbjct: 61 TKQAQAPTATQQQPAAAQKPVKKTREAALAESPRIAIDTPSIAGSIALVGGRIDDVSLKN 120 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 YH V SPI+ LLSP N + Y+AE + A + LPN+ T+W L+ P+ Sbjct: 121 YHETVDPKSPIIVLLSPENGPDPYYAETGF-LAAGDAALPNAQTLWT-ADRTTLSAAQPV 178 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + N ++F+R I++D+ Y+F + D+V N++ + R+ R + Sbjct: 179 TLSYDNGQGLVFKRKIAVDDRYMFTVADSVENHADKPVTLYSYMRVARVGIPAGAGYAAL 238 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN--SWLGISDKYWASVFIPSKETSFHSQ 274 EGFI V+G+ + E KY +EK + S WLG ++KYWA+V +P ++ F ++ Sbjct: 239 HEGFIGVIGESGVQEMKYEKVEKEPHATKTLSGTGGWLGFTEKYWAAVAVPQQDKPFEAR 298 Query: 275 FKYLSDGHAR-YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 F G + YQA +TI PG S T+ +FAGAK + Y+ I F++L Sbjct: 299 FSATGAGTVKAYQADTVGAPLTIQPGASGETSQRIFAGAKVVDMLDAYQAQ-GIEHFDLL 357 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 IDWGWFYF+ +PMF L+ ++++GNFG+AI+ TV VK+ F PLA K Y + A MK +Q Sbjct: 358 IDWGWFYFLTRPMFRLIDNLFHVLGNFGLAILAVTVLVKIAFLPLANKSYQAVAKMKEVQ 417 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PKI L+EK+ Q L + + L+K INP GC P+LLQIPVFF++YKV+ I++EM Sbjct: 418 PKIQALKEKYGDDK-QTLSREQMALFKREKINPAGGCLPMLLQIPVFFSLYKVLVITIEM 476 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKM 507 RHAPF+GWIKDL+A DPTNIF LFG++PF F+ +G+WPIIM +M++QMKM Sbjct: 477 RHAPFYGWIKDLSAPDPTNIFNLFGLIPFDPTQIPLFGSFLWLGVWPIIMGFTMWMQMKM 536 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 +P P D+ Q + WMPV+F F+L SF +GL+IYWSW+N++S+ QQ IM+ G + L Sbjct: 537 NPEPTDEIQRIAFAWMPVIFTFSLGSFASGLVIYWSWNNILSVTQQWYIMRRAGVKFELW 596 Query: 568 DRLRSTFSKNYNS 580 D L+ TF + Sbjct: 597 DNLKKTFDFKKKA 609 >gi|49475954|ref|YP_033995.1| putative inner membrane protein translocase component YidC [Bartonella henselae str. Houston-1] gi|49238762|emb|CAF28023.1| hypothetical protein BH12410 [Bartonella henselae str. Houston-1] Length = 612 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 259/610 (42%), Positives = 370/610 (60%), Gaps = 30/610 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N N+F+AI LS ++ AW FYV P+ E+ ++ Q + + +S A D Sbjct: 1 MEYNRNFFIAIGLSFGVLIAWHFFYVAPKQTELQQKQLIAQQLLKQQSAVSSPTANFSDS 60 Query: 61 ------------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 R L+ + RV +K L GSINL GAQFDDL L+ Y L V Sbjct: 61 ASTHESALIINHPMSPEIRDAELAKTNRVAIKTNELEGSINLVGAQFDDLLLKKYRLTVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKIL-TPTTPIKLVF 160 S + LL+P K Y AE + S++ + LP S+T W++ TP+TP+ L++ Sbjct: 121 KKSSEIALLNPKGFKETYLAEFGFTSSSLSKDALPQSDTRWHIEGNNTTLTPSTPVTLIY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 N F R +S+D+HY+F I D++TN S I S R+ R P TN + Sbjct: 181 NNGQGQTFRRILSIDDHYMFTIEDSITNESDKPIYLSSYARVARAAPPEHTNATYLLHEG 240 Query: 221 IAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + SL +KY D + S++ W+GI+DKYWA IP ++ + Sbjct: 241 MIGIAGDSLKTEKYKTLAELNPNPDNGQKSMTFSKVIGGWVGITDKYWAVAVIPPQDKEY 300 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 S+F Y YQ+ + +T+ P ++ T TN LFAGAK+ I+HY+ DL I +F Sbjct: 301 TSRFIYFDRLQTHYQSDLLGSLLTVAPNETKTITNRLFAGAKQVEIINHYQNDLKIKKFA 360 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +LIDWGWF FI KPMF L+ Y GNFGIAI+L TV +K L FPLA K Y S A MK Sbjct: 361 LLIDWGWFDFITKPMFSLIDILYKQTGNFGIAILLVTVLLKTLLFPLANKSYKSMARMKL 420 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 IQP + E++EK+ + + Q+A+I+LYKT INPLAGCWP+L+Q P+FFA+YKV+ I++ Sbjct: 421 IQPMLLEIKEKYPEDRTK-QQQAIIELYKTQKINPLAGCWPMLVQFPIFFALYKVLYITI 479 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 EMRHAPF+GWI+DLAA DPT++F LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P P Sbjct: 480 EMRHAPFFGWIQDLAAPDPTSLFNLFGLLPYTVPAFLMLGAWPLIMGITMFLQMRMNPAP 539 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D+ QAMI WMP+VF F L+SFP GL+IYW+W+N++S++QQ ++MK G +I L D L+ Sbjct: 540 QDQTQAMIFAWMPIVFTFMLASFPVGLVIYWAWNNILSMIQQGIMMKRQGVKIELFDNLK 599 Query: 572 STFSKNYNSQ 581 + + K+ + Sbjct: 600 AMWRKSPKKE 609 >gi|254477563|ref|ZP_05090949.1| 60 kDa inner membrane insertion protein [Ruegeria sp. R11] gi|214031806|gb|EEB72641.1| 60 kDa inner membrane insertion protein [Ruegeria sp. R11] Length = 604 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 219/604 (36%), Positives = 334/604 (55%), Gaps = 27/604 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY-------PRIEEMNNERKNIQTVKQPNQVDNSYA 54 ++N N +A ALS +++ W F+ + + Q A Sbjct: 3 DQNKNLLLATALSFLVILGWYIFFPPPEPAPQPDAEIAQTAPAGDGVSAPSAAQAIAGDA 62 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 A A+ + +PRV + + G+I+L+G + DDL L+ Y + + +SPIV +LSP+ Sbjct: 63 AAAGAAEAETAADAPRVAIDTARVTGTISLQGGRLDDLALKDYRVSLEPDSPIVKMLSPA 122 Query: 115 NTKNAYFAELDYVSTANN--IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 + NAY+A + A ++P +NT+W+L G+ LTP TP+ L ++N + F RTI Sbjct: 123 GSPNAYYALYGWAPGAGLGIDDVPGANTLWSLHEGETLTPETPVTLSWRNGKGLTFFRTI 182 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 S+DE+Y+F++V +V N + +P G I RH F + + + D +L E Sbjct: 183 SIDENYMFQVVQSVMNEGAGTVSLAPYGTIARHGMPQDLKNFFILHEGVVGMADGTLAEI 242 Query: 233 KYSDIEKSSIS---------NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 Y D+ + E N W+G +D YW S +P SF S K+ + Sbjct: 243 DYDDMADFDLDARSGARSEITQVEGNGWIGFTDHYWMSTLVPEPGQSFRSIAKF-DERRE 301 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 YQ +T+ G+ T LFAGAKE+ TI Y+KD I F IDWGWF+F+ Sbjct: 302 IYQTDVVLPTVTLANGEGTEVTTELFAGAKEWATIRGYQKD-GIEGFLDSIDWGWFFFLT 360 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F ++ + L+GN G AI+ TV +K+L FPLA K Y S A MK +QP++++++EK Sbjct: 361 KPIFAVLHWLNALIGNMGWAIIGLTVLIKILVFPLAYKSYASMAKMKELQPEMEKIKEKA 420 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q LQ+ M+ LYK +NP AGC PIL+QIP+FF++YKVI ++LE+RHAPF+G + Sbjct: 421 GD-DRQKLQQEMMALYKKEKVNPAAGCLPILIQIPIFFSLYKVIFVTLELRHAPFFGPFQ 479 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL------SMFIQMKMSPPPADKGQA 517 DL+A DPT+I LFG+LPF P + +I L SM++Q K++P P D Q Sbjct: 480 DLSAPDPTSIMNLFGLLPFTGPEPGSILATVLIGILPLLLGISMWLQQKLNPAPTDPTQQ 539 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MI WMP VF+F L F +GL++YW +N I+ QQ +IM+ HG + + ++S+F K+ Sbjct: 540 MIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRSHGYKPDVFGNIKSSFKKS 599 Query: 578 YNSQ 581 ++ Sbjct: 600 PKAE 603 >gi|297182643|gb|ADI18801.1| preprotein translocase subunit yidc [uncultured SAR11 cluster bacterium HF4000_37C10] Length = 560 Score = 422 bits (1083), Expect = e-115, Method: Composition-based stats. Identities = 199/564 (35%), Positives = 321/564 (56%), Gaps = 7/564 (1%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + N +AI LS +++ W F+ P +E E + ++ + + R Sbjct: 1 MDSKNVLMAIVLSTLVLVFWATFFEPPPVERQIAEDQVTKSEELSSPSIEKVELSKKIAR 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + RV+++N ++ GSI+L+GA DD+ + Y + S+ V L+P ++ Y+ Sbjct: 61 DDTIDSVARVKIENNNIKGSISLQGAIIDDIIFKNYKESLESDQK-VIFLNPKSSDEGYY 119 Query: 122 AELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E + S +N ++LP NT+W + K+LTP PI L + N ++F + I LD+ YLF Sbjct: 120 IETGWASNSNEKLKLPLDNTIWKVKGNKVLTPNKPIVLEWDNNEGLIFTKKIELDDKYLF 179 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 KI + N S F P +I R+ + + EGFI + ++++ + + Sbjct: 180 KISQGIKNTSNKSYEFFPYAQITRNYKPDVIPIYILHEGFIGMFD--DELKEEDYEDVED 237 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 + S WLGI+DKYW + +P K F S+F + + + Sbjct: 238 EKFIINSSKGWLGITDKYWLTAIVPEKGKKFKSEFLSIDGKYKANFI--IKEATVLSSNA 295 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 SIT F AKE I Y + L I +F++ IDWGWFYFI KP+F ++ YF+ L GNF Sbjct: 296 SITNEINAFVMAKEVAVIDDYAEKLGIEKFDLTIDWGWFYFITKPLFFVIEYFFKLTGNF 355 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI++ T V+++FFPLA + S A MK +QP++ L+E K + LQ+ M+ LYK Sbjct: 356 GVAIIILTALVRIVFFPLANYSFRSMAKMKILQPEMIRLKELHKDDKTK-LQQEMMALYK 414 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP++GC P+L+QIP FFA+YK++ +++EMR PF+GWI+DL+A DPT+IF LFG++ Sbjct: 415 REKVNPVSGCLPVLIQIPFFFAVYKMLYVTIEMRQQPFFGWIQDLSARDPTSIFNLFGLI 474 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 P+ P F+ +G+WPI+M L+MF+Q K++P P D QA I ++P+ L+ FP+GL++ Sbjct: 475 PWDPPTFLMIGVWPILMGLTMFLQQKLNPTPPDPMQAKIFMFLPIFLTIILAPFPSGLVV 534 Query: 541 YWSWSNVISIVQQAVIMKMHGAEI 564 YW+ SNV+++ QQ VI++ + Sbjct: 535 YWTVSNVLTMAQQWVIIRGTKVKT 558 >gi|240850503|ref|YP_002971902.1| preprotein translocase subunit YidC [Bartonella grahamii as4aup] gi|240267626|gb|ACS51214.1| preprotein translocase subunit YidC [Bartonella grahamii as4aup] Length = 612 Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 255/610 (41%), Positives = 368/610 (60%), Gaps = 30/610 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT------------------ 42 ME N N+F+AI LS +++ AWQ +V P+ ++ ++ Q Sbjct: 1 MEYNRNFFIAIGLSFVVLIAWQFLHVAPKQAKLQKQQVITQQLSKQQSTLSTTTTNFSDD 60 Query: 43 VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + + R L+ + R+ +K L GSINL GAQFDDL+L+ Y L V Sbjct: 61 TSTHQATSIIEQPMTPEIRKAVLAKTKRIAIKTNELEGSINLVGAQFDDLHLKKYRLTVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKIL-TPTTPIKLVF 160 SP + LL+P K Y AE + S + + LP S+T W + + TP+TPI L++ Sbjct: 121 KKSPEIDLLNPKGFKTTYLAEFGFASASLPAKALPQSDTQWQIEGNNTILTPSTPITLIY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 N +F R +S+D+H++F I D+++N S I S R+ R P TN + Sbjct: 181 NNGQGQIFRRILSVDDHFMFTIEDSISNESDQPIYLSSYARVARAAPPEHTNATYLLHEG 240 Query: 221 IAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + SL +KY D + S++ + W+GI+DKYWA IP + + Sbjct: 241 MIGIAGDSLKTEKYKTLAELDPNPDNGQKSMTFSKVTGGWIGITDKYWAVAVIPPQNKEY 300 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 S+F Y YQ+ + +TI P ++ T TN LFAGAK+ I++Y+ DL I +F Sbjct: 301 TSRFIYFDRLQTHYQSDLLGSLLTIAPNETKTITNRLFAGAKQVEIINNYQNDLKIKKFA 360 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +LIDWGWF FI KPMF L+ Y GNFGIAI+L TV +K L FPLA K Y S A MK Sbjct: 361 LLIDWGWFDFITKPMFSLIDVLYKQTGNFGIAILLVTVLLKTLLFPLANKSYKSMARMKL 420 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ E++EK+ + Q+A+I+LYKT INPLAGCWP+L+Q P+FFA+YKV+ I++ Sbjct: 421 LQPRLLEIKEKYPDDKTK-QQQAIIELYKTEKINPLAGCWPMLVQFPIFFALYKVLYITI 479 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 EMRHAPF+GWIKDLAA DPT++F LFG+LP+ P F+ +G WP+IM ++MF+QM+M+P P Sbjct: 480 EMRHAPFFGWIKDLAAPDPTSLFNLFGLLPYTTPTFLMIGAWPLIMGITMFLQMRMNPAP 539 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D+ QAMI WMPVVF F L+SFP GL+IYW+W+N++SI+QQ ++MK G +I L D L+ Sbjct: 540 QDQSQAMIFTWMPVVFTFMLASFPVGLVIYWAWNNILSIIQQGIMMKRQGVKIELFDNLK 599 Query: 572 STFSKNYNSQ 581 + + K+ + Sbjct: 600 TMWRKSPKKE 609 >gi|71083172|ref|YP_265891.1| putative inner membrane protein translocase component YidC [Candidatus Pelagibacter ubique HTCC1062] gi|123647065|sp|Q4FNF1|OXAA_PELUB RecName: Full=Inner membrane protein oxaA gi|71062285|gb|AAZ21288.1| 60 kDa inner membrane protein [Candidatus Pelagibacter ubique HTCC1062] Length = 558 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 208/564 (36%), Positives = 333/564 (59%), Gaps = 8/564 (1%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 N AI+LS ++ + F+ P + N +N + + Sbjct: 1 MDTRNVIAAISLSAAVIILYSLFFQPDPATIKKNLAEQNKIENNEDTPSLDKNENFSKLS 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 RA AL + R++ +N S++GSI+LKGA DDL + Y+++++ N +TLLSP N ++ Y Sbjct: 61 RADALKENDRIQFENGSVVGSISLKGAAIDDLTFKEYNIELNRNEK-ITLLSPRNVEDGY 119 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E +VST NI++P+++TVW + LT P+KL + N I FE+ ISLD+ +LF Sbjct: 120 LIESGFVSTNKNIDIPDASTVWEVSGNNKLTNNNPVKLTWSNTQGITFEKHISLDDQFLF 179 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + + + N+S F G+I+R++ + + + EGF++VL D L+E+ Y DI+ Sbjct: 180 TVKEKIINSSDKSYNFYSYGQIIRNELPEISGFYILHEGFLSVLDD-ELIEEDYDDIQDK 238 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 + + ++ ISDK+W + IP K F + F Y + A Y S I + Sbjct: 239 KFTQIAQD-GFVAISDKFWVTSVIPPKGKEFKTTFDYKNKFRANY---ISTKGIEVKANS 294 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 SI + AK I Y ++L I +F++ IDWG+ YFI KP+F ++ YF+ L+GN+ Sbjct: 295 SIEEKIQIIVAAKRVNVIDGYAENLNINKFDLAIDWGFMYFITKPLFFVLDYFFKLLGNY 354 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI+ T+ ++L FFPLA + S MK + P++ L+E K + LQ+AM+ LYK Sbjct: 355 GLAIIAVTICIRLAFFPLANFSFKSMGKMKLLAPEMARLKELHKDDKMK-LQQAMMALYK 413 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP++GC PIL+QIPVFFA+YKV+ +++EMRH PF+GWI DL+ DPT++F +FG++ Sbjct: 414 KEKVNPMSGCLPILVQIPVFFALYKVLFVTIEMRHMPFYGWIHDLSDRDPTSLFNVFGLI 473 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 P+ P F+ +G WPIIM ++M+IQ K++P P D QA I + PV L+ FPAGL+I Sbjct: 474 PWDPPSFLLIGAWPIIMGITMWIQQKLNPTPPDPIQAKIFMFFPVFLTVILAPFPAGLVI 533 Query: 541 YWSWSNVISIVQQAVIMKMHGAEI 564 YWS++N+ +++QQ ++ + + Sbjct: 534 YWSFNNIFTMIQQYIVQRKMTIKT 557 >gi|91762399|ref|ZP_01264364.1| putative inner membrane protein translocase component YidC [Candidatus Pelagibacter ubique HTCC1002] gi|91718201|gb|EAS84851.1| putative inner membrane protein translocase component YidC [Candidatus Pelagibacter ubique HTCC1002] Length = 558 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 208/564 (36%), Positives = 333/564 (59%), Gaps = 8/564 (1%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 N AI+LS ++ + F+ P + N +N + + Sbjct: 1 MDTRNVIAAISLSAAVIILYSLFFQPDPATIKKNLAEQNKIENNEDTPSLDKNENFSKLS 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 RA AL + R++ +N S++GSI+LKGA DDL + Y+++++ N +TLLSP N ++ Y Sbjct: 61 RADALKENDRIQFENGSVVGSISLKGAAIDDLTFKEYNIELNRNEK-ITLLSPRNVEDGY 119 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E +VST NI++P+++TVW + LT P+KL + N I FE+ ISLD+ +LF Sbjct: 120 LIESGFVSTNKNIDIPDASTVWEVSGNNKLTNNNPVKLTWSNTQGITFEKHISLDDQFLF 179 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + + + N+S F G+I+R++ + + + EGF++VL D L+E+ Y DI+ Sbjct: 180 TVKEKIINSSDKSYNFYSYGQIIRNEIPEISGFYILHEGFLSVLDD-ELIEEDYDDIQDK 238 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 + + ++ ISDK+W + IP K F + F Y + A Y S I + Sbjct: 239 KFTQIAQD-GFVAISDKFWVTSVIPPKGKEFKTTFDYKNKFRANY---ISTKGIEVKANS 294 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 SI + AK I Y ++L I +F++ IDWG+ YFI KP+F ++ YF+ L+GN+ Sbjct: 295 SIEEKIQIIVAAKRVNVIDGYAENLNINKFDLAIDWGFMYFITKPLFFVLDYFFKLLGNY 354 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI+ T+ ++L FFPLA + S MK + P++ L+E K + LQ+AM+ LYK Sbjct: 355 GLAIIAVTICIRLAFFPLANFSFKSMGKMKLLAPEMARLKELHKDDKMK-LQQAMMALYK 413 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP++GC PIL+QIPVFFA+YKV+ +++EMRH PF+GWI DL+ DPT++F +FG++ Sbjct: 414 KEKVNPMSGCLPILVQIPVFFALYKVLFVTIEMRHMPFYGWIHDLSDRDPTSLFNVFGLI 473 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 P+ P F+ +G WPIIM ++M+IQ K++P P D QA I + PV L+ FPAGL+I Sbjct: 474 PWDPPSFLLIGAWPIIMGITMWIQQKLNPTPPDPIQAKIFMFFPVFLTVILAPFPAGLVI 533 Query: 541 YWSWSNVISIVQQAVIMKMHGAEI 564 YWS++N+ +++QQ ++ + + Sbjct: 534 YWSFNNIFTMIQQYIVQRKMTIKT 557 >gi|49474531|ref|YP_032573.1| putative inner membrane protein translocase component YidC [Bartonella quintana str. Toulouse] gi|49240035|emb|CAF26454.1| hypothetical protein BQ09780 [Bartonella quintana str. Toulouse] Length = 613 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 257/611 (42%), Positives = 371/611 (60%), Gaps = 31/611 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA----- 55 ME N N+F+AI LS ++ AW FYV P+ ++ +R Q + + ++ Sbjct: 1 MEYNRNFFIAIGLSFGVLIAWHFFYVAPKQAQLQQKRLIAQQLSKQQSTLSTSTPYFSDN 60 Query: 56 --------------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 + + R +AL+ + R+ +K L GSINL GAQFDDL L+ Y L V Sbjct: 61 ASITHESASIITHPITPEIRNEALAKTNRIAIKTDELEGSINLVGAQFDDLLLKKYRLTV 120 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKIL-TPTTPIKLV 159 SP + LL+P Y AE + S++ + LP S+T W + TP+TP+ L+ Sbjct: 121 DKKSPEIALLNPKGFTTTYLAEFGFTSSSLSAKALPQSDTQWQIEGNNTTLTPSTPVTLI 180 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N +F RT+S+D HY+F I D++ N S I S R+ R P TN + Sbjct: 181 YNNGQGQIFRRTLSVDNHYMFTIEDSIKNESDKPIYLSSYARVARAAPPEHTNATYLLHE 240 Query: 220 FIAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 + + SL +KY D + SI+ W+GI+DKYWA IP ++ Sbjct: 241 GMIGIASDSLKTEKYKTLAELNPNPDNSQKSITFSKNIGGWIGITDKYWAVAVIPPQDKE 300 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + S+F Y + YQ+ + +T+ P ++ TN LFAGAK+ I+HY+ DL I +F Sbjct: 301 YTSRFIYFDRLNTHYQSDLLGSLLTVAPNETKIVTNRLFAGAKQVEIINHYQNDLKIKKF 360 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +LIDWGWF FI KPMF L+ Y GNFGIAI+L TV +K L FPLA K Y S A MK Sbjct: 361 ALLIDWGWFDFITKPMFSLIDTLYKQTGNFGIAILLVTVLLKTLLFPLANKSYKSMARMK 420 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 IQP + E++EK+ + Q+A+I+LYKT INPLAGCWP+L+Q P+FFA+YKV+ I+ Sbjct: 421 LIQPMLLEIKEKYPDDRTK-QQQAIIELYKTQKINPLAGCWPMLIQFPIFFALYKVLYIT 479 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMRHAPF+GWI+DLAA DPT++F LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P Sbjct: 480 IEMRHAPFFGWIQDLAAPDPTSLFNLFGLLPYTVPTFLMLGAWPLIMGITMFLQMRMNPA 539 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 P D+ QAMI WMPV+F F L+SFP GL+IYW+W+N++SI+QQ+++MK G +I L D L Sbjct: 540 PQDQTQAMIFAWMPVIFTFMLASFPVGLVIYWAWNNILSILQQSILMKRQGVKIELFDNL 599 Query: 571 RSTFSKNYNSQ 581 ++ + K+ + Sbjct: 600 KAMWWKSPKKE 610 >gi|330813521|ref|YP_004357760.1| inner membrane protein translocase component YidC, long form [Candidatus Pelagibacter sp. IMCC9063] gi|327486616|gb|AEA81021.1| inner membrane protein translocase component YidC, long form [Candidatus Pelagibacter sp. IMCC9063] Length = 564 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 216/570 (37%), Positives = 339/570 (59%), Gaps = 14/570 (2%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA------- 54 N AI LS II+ WQ + P I++ + + K ++ + Sbjct: 1 MDTKNILTAIILSTIIIVGWQVLVIDPEIKKEQAKVEKTIQTKPTAGKPSAPSLNKKIQV 60 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 R +AL RV+L N + GSI+L GA DD+ L+ Y + NS V +L+P Sbjct: 61 QKKKVSRQEALLTDQRVKLDNAKITGSISLVGALIDDVTLKNYQESLDENSKQVVILNPK 120 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 Y+ E + S ANNI +P++N+VW L + LTP TPI+L + N N ++F + I + Sbjct: 121 KINKGYYLESGWAS-ANNINVPDNNSVWKLTRNRTLTPRTPIELEWDNQNGLVFTKKIEV 179 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 D+ YLF I +++ NNS + +I R + + + + EG + V+ ++L E+ Y Sbjct: 180 DDQYLFSITESIKNNSKANVDLFHYSQITRKEKPQVQDFYILHEGLVGVID-ETLQEEDY 238 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D+ K + ++ WLGI+DKYW + +P K+ +F+++F Y + A Y N Sbjct: 239 DDV-KDKNQKYQGTSGWLGITDKYWLTAIVPQKKQAFNAEFIYDTAYKANYIL---TNPT 294 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 +I GK ++++ F GAKE TI Y + I +F++ IDWGWFYF KP+F ++ Y Y Sbjct: 295 SIPSGKINSSSSQFFIGAKEVKTIDGYAESANINKFDLAIDWGWFYFFTKPLFFIIDYLY 354 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 N GNFG AI+L T +++LFFPLA + S A MK +QP+I +++ +K Q +Q Sbjct: 355 NFSGNFGWAIVLLTAGIRILFFPLANYSFASMAKMKALQPEIARMKDLYKDDK-QKIQTE 413 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M+ LY+ INP++GC P+L+QIP FFAIYK++ ++LEMRHAPF+GWI+DL+A DPT++F Sbjct: 414 MMGLYRKEKINPVSGCLPMLIQIPFFFAIYKMLFVTLEMRHAPFFGWIQDLSAPDPTSLF 473 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 LFG++P+ P F+ +G+WPI+M +SM+IQ K++P P D QA I + P+ L+SF Sbjct: 474 NLFGLIPWDPPSFLMIGVWPILMGVSMWIQQKLNPAPTDPIQAKIFAFFPLFLTVMLASF 533 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P+GL++YW+ +NV+++ QQ VI++ + Sbjct: 534 PSGLVVYWTVNNVLTMAQQYVIIRKTTIKT 563 >gi|307294062|ref|ZP_07573906.1| membrane protein insertase, YidC/Oxa1 family [Sphingobium chlorophenolicum L-1] gi|306880213|gb|EFN11430.1| membrane protein insertase, YidC/Oxa1 family [Sphingobium chlorophenolicum L-1] Length = 567 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 206/566 (36%), Positives = 321/566 (56%), Gaps = 12/566 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N +A+ L+ I++ W F+ E + + A Sbjct: 1 MDDKKNIILAVVLTAAILFGWPYVANHFFPAANPPATKIEGGKTTPLTPSGSAPAAEGAA 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + D A L PR+ ++ P + GSINLKGA+ DD+ L Y ++ +S + L SPS T Sbjct: 61 AVRDLALVLKDGPRIPIRTPKITGSINLKGARIDDIVLPTYKESIARDSHAIRLYSPSGT 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 K+AYFA + ++ P+ N+VW SGK LTP +P+ L + N FE S+DE Sbjct: 121 KDAYFAGFGW--QGEGLKTPDGNSVWT-ASGKELTPASPVTLTWNNGAGQSFEIRYSIDE 177 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 +Y+ V+N+ + G + R P T +T+ + G + V + + Y D Sbjct: 178 NYMITAQQKVSNSGAGTVAVKSYGYVSRAHPSTDPDTWTIHVGPMGVFNGAANYDVNYKD 237 Query: 237 IEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +EK S F + W+G +DKYW S +P ++ +F +Q + ++Q S + Sbjct: 238 LEKGPASQSFQSTGGWIGFTDKYWLSALVPDQKAAFSAQMR--KGAGTQFQTDISLAPVM 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + GKS+T TN LF GAKE T+ Y +D IP F+ IDWGWFY+ KP+F L+ + + Sbjct: 296 LAAGKSVTQTNRLFVGAKEVKTLEAY-QDAGIPLFDRAIDWGWFYWFEKPIFALLHWLFE 354 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +GNFG+AI+ T V+ L FP+A++Q+ S A M+ +QPK+ L+EK+K P+ LQ+ M Sbjct: 355 HIGNFGVAIICLTFVVRGLMFPVAQRQFASMAAMRAVQPKMKALQEKYKDDKPK-LQQEM 413 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NPLAGC PI +QIP+FFA+YKV+ +++EMRH PF WIKDL+A DP +I Sbjct: 414 MELYKREKVNPLAGCLPIFIQIPIFFALYKVLQLTIEMRHQPFVLWIKDLSAPDPLHILN 473 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+LPF P F+ +G+ +++ +SM+ Q K++P D Q + MP + +F ++ F Sbjct: 474 LFGLLPFTPPAFLGIGVLALLLGISMYFQFKLNPAQMDPMQQQVFAIMPWMMMFIMAPFA 533 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHG 561 AGL++YW +N +S++QQ + K H Sbjct: 534 AGLLVYWITNNCLSMLQQWWLYKRHP 559 >gi|329888537|ref|ZP_08267135.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain-containing protein [Brevundimonas diminuta ATCC 11568] gi|328847093|gb|EGF96655.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain-containing protein [Brevundimonas diminuta ATCC 11568] Length = 600 Score = 417 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 227/599 (37%), Positives = 338/599 (56%), Gaps = 25/599 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIE--------EMNNERKNIQTVKQPNQVDNSY 53 E + N + + +I+ + + P+ E ++ + + Sbjct: 4 ENSRNTIIFFVCAALIMGVYYFMVMRPQAESRRQAQIVAAEQQKAREASADAGLTPSGAA 63 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 V I DRAQAL RV ++ P+L GS++L+GA+ DDL L Y + NSP V L P Sbjct: 64 PGVFIKDRAQALGTVARVPIQTPTLKGSLSLQGARIDDLYLTRYRETLDKNSPPVELFRP 123 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 ++AYFA+ + +P NTVW L G LTPTTP++L + N + + F R +S Sbjct: 124 QGMEHAYFAQFGWSGPNVAGGVPGPNTVWRLTKGSTLTPTTPVELTWDNGSGLRFTRVVS 183 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGD---KSL 229 +D+ Y+F + DTV N I +P GR+ R P + EG I GD S Sbjct: 184 IDDQYMFTVKDTVANLGTQAIAIAPYGRVERQGVPVDLGKQMILHEGAIGTFGDGGGYST 243 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAK 288 + KY D K + WLGI+DKYW + IP+++ + +F G ++A Sbjct: 244 EQVKYKDWAKKPRIENQSTGGWLGITDKYWLAALIPTQDETIEGRFSVRDAQGMNIHEAA 303 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 TI PG+ I T LFAGAK + YE+ L +PRF IDWG F+F+ +P+F Sbjct: 304 MLGATHTIQPGRQIEETQRLFAGAKRAEVLKAYEQSLNLPRFVYAIDWGMFWFLTRPIFT 363 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ +FY ++GNFG+AI+ TV VKL+ FPLA K Y S + M+N+QPK++E+++K S P Sbjct: 364 VVEFFYGVLGNFGLAILALTVVVKLILFPLANKSYESLSKMRNLQPKMEEIKKKH-GSEP 422 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q Q+ M+ LY+ INPLAGC P+++QIPVF+A+YKV+ +++EMRHAPF+GWI+DL+A Sbjct: 423 QKQQQEMMALYQREKINPLAGCLPMVVQIPVFYALYKVLFVTIEMRHAPFFGWIRDLSAR 482 Query: 469 DPTNIFTLFGILPFYLPGF----------MHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 DP+ I+ LFG +P+ +H+G+ P++ +M++QM M+PP D Q Sbjct: 483 DPSTIWNLFGAIPWDPATLPILGGILNGPLHLGVLPLVYGFTMWLQMAMNPPAQDPMQRQ 542 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 I MP+VF F ++ F AGL+IYW+W+NV+SI+QQ VIM AE + L + F K Sbjct: 543 IFALMPIVFTFIMAPFAAGLLIYWAWNNVLSIIQQYVIMHRFKAENPIDAFL-ARFKKA 600 >gi|294010745|ref|YP_003544205.1| preprotein translocase YidC subunit [Sphingobium japonicum UT26S] gi|292674075|dbj|BAI95593.1| preprotein translocase YidC subunit [Sphingobium japonicum UT26S] Length = 567 Score = 417 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 211/566 (37%), Positives = 321/566 (56%), Gaps = 12/566 (2%) Query: 1 MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N +A+ L+ I++ W Q F+ E + + A Sbjct: 1 MDDKKNIILAVVLTAAILFGWPYVAQYFFPAANPPATKIEGGKTTPLTPSGAAPAAEGAA 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 I D A L SPRV ++ P + GSINLKGA+ DD+ L Y ++ +SP + L SPS T Sbjct: 61 AIRDLALVLKDSPRVAIRTPKITGSINLKGARIDDIVLPTYKETIAKSSPAIRLYSPSGT 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 K+AYFA + ++ P+ TVW S K LTPT+P+ L + N FE S+DE Sbjct: 121 KHAYFAGFGW--QGEGVKTPDGGTVWT-ASAKELTPTSPVTLSWNNGAGQTFEIRYSIDE 177 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 +Y+ V+N + G + R P +T+ + G + V + + YSD Sbjct: 178 NYMITAQQKVSNGGAGAVGVKSYGYVSRATPSADPDTWTIHVGPMGVFNGAANYDVNYSD 237 Query: 237 IEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +EK + F + W+G +DKYW S IP ++ +F Q + ++Q S I Sbjct: 238 LEKGPATQSFQSTGGWIGFTDKYWLSALIPDQKAAFTGQMR--KGAGTQFQTDMSLAPIM 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PGK++T TN LF GAKE T+ Y +D +P F+ IDWGWFY+ KP+F L+ + + Sbjct: 296 VAPGKAVTQTNRLFVGAKEVKTLEAY-QDAGVPLFDRAIDWGWFYWFEKPIFALLHWLFE 354 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +GNFG+AI+ T V+ L FP+A++Q+ S A M+ +QPK+ L+EK+K P LQ+ M Sbjct: 355 HIGNFGVAIICLTFVVRGLMFPVAQRQFASMAAMRAVQPKMKALQEKYKDDKP-RLQQEM 413 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NPLAGC PI +QIP+FFA+YKV+ +++EMRH PF WIKDL+A DP +I Sbjct: 414 MELYKREKVNPLAGCLPIFIQIPIFFALYKVLQLTIEMRHQPFVLWIKDLSAPDPLHIVN 473 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+LPF P F+ +G+ +++ +SM+ Q K++P D Q + MP + +F ++ F Sbjct: 474 LFGLLPFTPPAFLGIGVLALLLGISMYFQFKLNPAQMDPMQQQVFAIMPWMMMFIMAPFA 533 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHG 561 AGL++YW +N +S++QQ + K H Sbjct: 534 AGLLVYWITNNCLSMLQQWWLYKRHP 559 >gi|94495881|ref|ZP_01302460.1| 60 kDa inner membrane insertion protein [Sphingomonas sp. SKA58] gi|94424573|gb|EAT09595.1| 60 kDa inner membrane insertion protein [Sphingomonas sp. SKA58] Length = 568 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 204/568 (35%), Positives = 318/568 (55%), Gaps = 12/568 (2%) Query: 1 MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N +A+ L+ I++ W F+ E V +P+ + + Sbjct: 1 MDDKKNIILAVLLTAAILFGWPYISNYFFPTANPPATKIEGGKQVPVARPDADPAADSPA 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 I DRA L SPR+ ++ L GSINLKGA+ DD+ L Y ++ +SP V L SPS T Sbjct: 61 AIRDRALVLRESPRIPIRTAKLTGSINLKGARIDDIVLPTYKETIAKDSPAVRLYSPSGT 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 ++AYFA + + P+ NT+W G LTPT+P+ L + N LFE +S+D+ Sbjct: 121 QDAYFAGFGW--QGEGLRAPDRNTLWT-AQGSALTPTSPVTLSWNNGAGQLFEIRLSVDD 177 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 +Y+ V+N + P I R +T+ + G + V + + Y D Sbjct: 178 NYMITAAQKVSNTGTGTVGVKPYAYISRTGIPKDPDTWTIHVGPMGVFNGAANYDVNYKD 237 Query: 237 IEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 ++K + +F W+G +DKYW S +P+ + F QF+ +YQA + Sbjct: 238 LDKGPSVQSFQSKGGWIGFTDKYWLSALVPAADADFAGQFR--KGAGTQYQADVALGSNM 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PGK++T T LF GAKE T+ Y +D +P F+ IDWGWFY+ KP+F L+ + + Sbjct: 296 VAPGKAVTQTQRLFVGAKEVKTLEAY-QDAGVPLFDRAIDWGWFYWFEKPIFALLHWLFE 354 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +GNFG+AI+ T V+ + FP+A++Q+ S A M+ +QPK+ L+EK K Q+ K M Sbjct: 355 HIGNFGVAIICLTFVVRAIMFPIAQRQFSSMAAMRALQPKMKALQEKHKDDKQQLQMK-M 413 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NPLAGC PI +QIP+FFA+YKV+ +++EMRH PF WIKDL+A DP +I Sbjct: 414 MELYKQEKVNPLAGCLPIFIQIPIFFALYKVLMLTIEMRHQPFVLWIKDLSAPDPLHILN 473 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+L F P F+ +G+ +++ +SM+ Q K++P D Q I+ MP + +F ++ F Sbjct: 474 LFGLLDFTPPAFLGIGVLALLLGISMYFQFKLNPTQMDPMQQQIMGIMPWMMMFIMAPFA 533 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 AGL++YW +N +S+ QQ + + H Sbjct: 534 AGLLVYWITNNCLSMAQQWWLYRKHPVP 561 >gi|319408960|emb|CBI82617.1| translocase precursor subunit [Bartonella schoenbuchensis R1] Length = 611 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 259/609 (42%), Positives = 375/609 (61%), Gaps = 29/609 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA------ 54 ME N N+F+AI LS+II AW FYV P+ ++ + Q KQ +++ ++ Sbjct: 1 MEYNRNFFIAIGLSLIIFVAWHFFYVAPQQAKLQEMQMAQQLSKQSSEIPSTDMHFSDSA 60 Query: 55 -----------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 + ++R+ L+ + R+ +K L GSINL GAQFDDL L+ Y L V Sbjct: 61 QISGSGSISDRPMTPENRSAELAKTNRIAIKTDELEGSINLVGAQFDDLFLKKYRLTVDK 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKIL-TPTTPIKLVFK 161 SP + LL+P+ Y AE + S++ LP S+T W + TP+TP+ L++ Sbjct: 121 GSPEIALLNPNGFNTTYLAEFGFTSSSLPATALPQSHTQWQIEGKNTTLTPSTPVTLIYN 180 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 N +F RT+S+D HY+F I D++ N S + I SP R+ R P TN + + Sbjct: 181 NGQGQIFRRTLSIDNHYMFTIEDSIKNESDNPIYLSPYARVARAAPPEYTNATYLLHEGM 240 Query: 222 AVLGDKSLVEQKYSD---------IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + SL + Y + + S+ + W+GI+DKYWA V IP ++ + Sbjct: 241 IGIAGDSLKTETYKNLEELNPNPENGQKSMIFSKVTGGWIGITDKYWAVVVIPPQDQEYT 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 S+F Y + + YQ+ ++ +T+ P ++ T TN LFAGAK+ I+ Y+ L I +F + Sbjct: 301 SRFIYFNQLNTHYQSDLQSSLLTVAPNETKTITNHLFAGAKQVEIINRYQNQLKIRKFGL 360 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 LIDWGWF FI KPMF L+ FY GNFGIAI+L TV +K+L FPLA K Y S A MK + Sbjct: 361 LIDWGWFDFITKPMFALIDIFYKQTGNFGIAILLVTVLLKVLLFPLANKSYKSMARMKLV 420 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP + E++EK+ + Q+A+I LYKT INPLAGCWP+L+Q P+FFA+YKV+ I++E Sbjct: 421 QPMMQEIKEKYADDRVK-QQQAVIALYKTQKINPLAGCWPMLVQFPIFFALYKVLYITIE 479 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P P Sbjct: 480 MRHAPFFGWIQDLAAPDPTSIFNLFGLLPYEVPTFLILGAWPLIMGITMFLQMQMNPTPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QAMI WMPV+F F L+SFPAGL+IYW+W+N +SI+QQ ++MK G +I L + L++ Sbjct: 540 DPTQAMIFTWMPVIFTFMLASFPAGLVIYWAWNNTLSIIQQGIMMKRQGVKIELFNNLKA 599 Query: 573 TFSKNYNSQ 581 F K + Sbjct: 600 MFHKKSKKE 608 >gi|296775679|gb|ADH42956.1| preprotein translocase subunit YidC [uncultured SAR11 cluster alpha proteobacterium H17925_23J24] Length = 569 Score = 415 bits (1066), Expect = e-113, Method: Composition-based stats. Identities = 211/576 (36%), Positives = 326/576 (56%), Gaps = 18/576 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV---- 56 M+ N AIALS +++ W + P+IEE ++ K+ D V Sbjct: 1 MDF-RNVIFAIALSFAVLFGWSVIFETPKIEEQAKLEQSENYQKEDAASDAPSVNVEKKD 59 Query: 57 -LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 I R A+ + R+ +N +++GSI LKGA DD+ + Y+ + S+ VT L+P Sbjct: 60 LPIVSRNDAIKSTNRINFENENVVGSITLKGALIDDITFKKYNETLGSDKK-VTYLNPQE 118 Query: 116 TKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 T YF E + ++ +I LPN +T+W + L+ +P+ + +KN + I F + I L Sbjct: 119 TNEGYFIETGWAASNVEDIGLPNKDTLWKVKGNNKLSTGSPVIMEWKNKSGITFRKKIEL 178 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ-----TATNTFGVQEGFIAVLGDKSL 229 D +LF++ + N S + P +I R++ + + T + +GFI V Sbjct: 179 DSKFLFRVTQEIQNKSGSIVELYPYAQITRNQKPVLQAGSMSGTLILHDGFIGVFN--ED 236 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +++ D K + + WLGI+DK+W + +P K SF +F Y S+ Sbjct: 237 LKEYDYDDIKDKKKEHNAESGWLGITDKFWITALVPEKNQSFRGEFVYKSESFKANYI-- 294 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + I + P S +T +F AKE I Y + +I +F++ IDWGW YF+ KP+F + Sbjct: 295 ANKPIVVQPSSSKASTTKIFVAAKEVKVIDGYAEAESINKFDLTIDWGWLYFLTKPLFFI 354 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 ++Y + L NFGIAI+L T V+LLFFPLA + S A MK +QP++ L+E K + Sbjct: 355 INYLFELTKNFGIAIILVTAAVRLLFFPLANYSFRSMAKMKILQPELLRLKEVHKGDKVK 414 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 LQ+ M+ LY+ +NPL+GC PIL+QIP FFAIYK++ ISLEMRH PF+GWIKDL+A D Sbjct: 415 -LQQEMMALYRREKVNPLSGCLPILIQIPFFFAIYKMLLISLEMRHQPFFGWIKDLSAQD 473 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 PT+IF +FG++P+ P F+ +G WPI+M +M++Q K++P P D QA I + P+ Sbjct: 474 PTSIFNIFGLIPWDPPSFLIIGAWPIMMGATMYLQQKLNPTPPDPIQAKIFLFFPLFLTI 533 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 L+ FPAGL++YW+ +NV++I QQ VIMK + Sbjct: 534 ILAPFPAGLVVYWTINNVLTIAQQWVIMKRTTVKTK 569 >gi|197103856|ref|YP_002129233.1| preprotein translocase subunit [Phenylobacterium zucineum HLK1] gi|254773009|sp|B4RDV5|OXAA_PHEZH RecName: Full=Inner membrane protein oxaA gi|196477276|gb|ACG76804.1| preprotein translocase subunit [Phenylobacterium zucineum HLK1] Length = 598 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 206/596 (34%), Positives = 322/596 (54%), Gaps = 19/596 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK-----NIQTVKQPNQVDNSYAAV 56 + N + + +++ +Q F + P + E + Sbjct: 4 DNTRNTIIFFVCAALLLVLYQVFVIGPADKRRQAELARQAPPAAAAQAGQAGAPAAPQVP 63 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 R A++ +PRV++ P L GS++L+GA+ DDL L + V +SP V LL P Sbjct: 64 QAMTRQAAVAATPRVKIDTPMLTGSLSLRGARIDDLYLDRFRQTVEKDSPPVELLRPEGA 123 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 + +FAE+ +V AN LP+S VW L G L P P+ L + N + F R I +D+ Sbjct: 124 QYPWFAEVGWVG-ANVPGLPDSGAVWTLAQGSTLAPGQPVVLTYANGQGLTFTRRIEVDD 182 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 YLF I DTV N + + +P G + R + D L + KY Sbjct: 183 RYLFTITDTVANTTGQPVTIAPYGTVQRQGVPADLGKNQIVHEGAIGWLDGKLRQVKYGK 242 Query: 237 IEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEI 294 K ++ + WLGI+DKYW + IP ++ + QF+ G A F + Sbjct: 243 WRKEGGGPAYNSTGGWLGITDKYWLAALIPGQQEAVTGQFRRTQAPGVDVLDANFVGAPV 302 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G+ ++ T FAGAK+ P + YE+ L + F+ +DWG F+F+ +P+F + + + Sbjct: 303 TIPAGRQVSETTRFFAGAKQVPILRDYEQSLGVAHFDNAVDWGNFWFLTRPIFQFLEFIH 362 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +G FG+AI+ TV V+L+FFPLA KQY S MK +QP+++ELR+K+K P + Q+ Sbjct: 363 RYIGTFGLAILALTVVVRLIFFPLANKQYESITKMKKVQPQMEELRKKYKDDPAK-QQQE 421 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 ++ LY+ +NPLAGC P+LLQIPVF+A+YKV+++++EMRHAPF GWI+DL+A DPT I+ Sbjct: 422 LLALYQREKVNPLAGCLPLLLQIPVFYALYKVLTVTIEMRHAPFMGWIQDLSARDPTTIW 481 Query: 475 TLFGILPFYLPGF----------MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 LFG++P+ +H+G+ PI+ +M++ M MSPP D Q I MP Sbjct: 482 NLFGLIPWDPASAPLIGAFLNGPLHLGVLPILYGFTMWLTMAMSPPAGDPIQQKIFQLMP 541 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 ++F F ++ F GL+IYW+WSNV++++QQ VIM+ + + +R K + Sbjct: 542 IIFTFIMAPFAVGLLIYWTWSNVLTLLQQYVIMRRFKVDNPIDQIIRKLTGKPKPA 597 >gi|157803235|ref|YP_001491784.1| putative inner membrane protein translocase component YidC [Rickettsia canadensis str. McKiel] gi|166977408|sp|A8EXB6|OXAA_RICCK RecName: Full=Inner membrane protein oxaA gi|157784498|gb|ABV72999.1| putative inner membrane protein translocase component YidC [Rickettsia canadensis str. McKiel] Length = 560 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 237/562 (42%), Positives = 344/562 (61%), Gaps = 4/562 (0%) Query: 1 MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M N N AI LS+ I++ WQ F V P ++ + + Q + D Sbjct: 1 MNNNIMNLIAAIVLSLSIIFGWQYFVVKPEHKKQQQQIAMQKAENLKKQKLKALIKPASD 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 Q + R+++++ SL GSI+LKG +FDDL L+ Y D+S NS V L SP+NT+NA Sbjct: 61 LVVQEANQVQRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSTEVRLFSPANTENA 120 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 YFAE+ VS ++++LPN++T+WN G+IL+P P+ L + N + + F TI+LDE+YL Sbjct: 121 YFAEIGLVSNLSSVKLPNNDTIWN-SDGEILSPEKPVNLFWVNEDGVKFLVTITLDENYL 179 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F + T+ NNS ++ G I R + +G I + + +K Sbjct: 180 FTVEQTIVNNSDKELPVQSYGLINRKYIAVEKAVNILHQGPIGCINENLKEYSYDDIKDK 239 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILP 298 S W+G++DKYW S IP K +++ S F Y L+ G RYQ F + I Sbjct: 240 KSEKFVASKVDWIGMTDKYWLSSLIPDKSSNYSSNFNYALTQGVERYQVDFISPVQIIKS 299 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G++ + T+ +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VG Sbjct: 300 GENFSITSRIFAGAKKVDLLDKYEKQYGIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVG 359 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 NFGI+I++ TV +KLL F LA K Y S MKN+QP+ID ++ + L + ++ L Sbjct: 360 NFGISILIVTVIIKLLMFTLANKSYCSMKKMKNLQPEIDRIKNLYGDDKA-RLNQEIMAL 418 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG Sbjct: 419 YKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFG 478 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 LPF P F+ +G WPI+M+++MF+Q +MSP PAD QA ++ +MP++F+ SSFP GL Sbjct: 479 FLPFSPPSFLMIGAWPILMAITMFLQQRMSPEPADPVQAQVMKFMPLIFLVMFSSFPVGL 538 Query: 539 IIYWSWSNVISIVQQAVIMKMH 560 +IYWSW+N++SI+QQ I K + Sbjct: 539 LIYWSWNNILSIIQQYYINKFN 560 >gi|91204826|ref|YP_537181.1| putative inner membrane protein translocase component YidC [Rickettsia bellii RML369-C] gi|157826396|ref|YP_001495460.1| putative inner membrane protein translocase component YidC [Rickettsia bellii OSU 85-389] gi|122426155|sp|Q1RKM2|OXAA_RICBR RecName: Full=Inner membrane protein oxaA gi|166977407|sp|A8GUC7|OXAA_RICB8 RecName: Full=Inner membrane protein oxaA gi|91068370|gb|ABE04092.1| Preprotein translocase subunit YidC [Rickettsia bellii RML369-C] gi|157801700|gb|ABV78423.1| putative inner membrane protein translocase component YidC [Rickettsia bellii OSU 85-389] Length = 559 Score = 412 bits (1057), Expect = e-112, Method: Composition-based stats. Identities = 235/560 (41%), Positives = 344/560 (61%), Gaps = 6/560 (1%) Query: 1 MERN-WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M N N AI LS+ I++ WQ F V P+ ++ + + + A + Sbjct: 1 MNNNIVNLVAAIVLSLGIIFGWQYFIVKPQQQKQQQQIALQKAKDLKKKESAQLEATPVI 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + S +PR+++ + +L GSI+LKG +FDDL L+ Y D+S NSP V L SPS+TK+A Sbjct: 61 VQEA--SQAPRIKIDSNALSGSISLKGLRFDDLILKKYKQDLSENSPEVVLFSPSDTKDA 118 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 YFAE+ +VS ++++LPN+ T+WN +ILTP P+ L + N + + F I++DE+YL Sbjct: 119 YFAEIGWVSNLSSVKLPNNETIWN-SDSEILTPEKPVNLFWVNEDGVKFLVAITVDENYL 177 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F I T+ NNS ++ G I R + +G I + + +K Sbjct: 178 FTIEQTIVNNSNQELPVQSYGLINRKYTAVEKAVNILHQGPIGCIDENLKEYSYDDIKDK 237 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILP 298 S W+GI+DKYW + IP K +++ S F Y + RYQ F + + P Sbjct: 238 KSEKFSASKVDWIGITDKYWLTSLIPDKSSNYSSNFNYAVKQEVERYQVDFISPVQIVKP 297 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G++ + LFAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VG Sbjct: 298 GENFSIKGRLFAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYKYVG 357 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 NFGI+I++ TV +KLL F LA K Y S MKN+QP+I+ ++ + L + ++ L Sbjct: 358 NFGISILIVTVIIKLLMFTLANKSYRSMKRMKNLQPEINRIKNLYGDDKA-RLNQEIMAL 416 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT+IF LFG Sbjct: 417 YKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTSIFNLFG 476 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 +L F LP F+ +G WPI+M+++MF+Q +MSP PAD QA ++ +MP+VF+ SSFPAGL Sbjct: 477 LLHFSLPSFLMIGAWPILMAITMFLQQRMSPEPADPVQAQVMKFMPLVFLVMFSSFPAGL 536 Query: 539 IIYWSWSNVISIVQQAVIMK 558 +IYWSW+N++SI+QQ I K Sbjct: 537 LIYWSWNNILSIIQQYYINK 556 >gi|294085069|ref|YP_003551829.1| 60 kDa inner membrane insertion protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664644|gb|ADE39745.1| 60 kDa inner membrane insertion protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 592 Score = 411 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 210/588 (35%), Positives = 334/588 (56%), Gaps = 34/588 (5%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN-----------------------NERKN 39 N N +AIALS+++++ WQ F + P++E+ ++ + Sbjct: 4 DNRNLILAIALSMVVLFGWQMFVIKPQLEQEAAQQELLAAQAQAEAALQASQQADSDTPS 63 Query: 40 IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 + N N+ A A+ +PR+ + P + GSI++ GA+ DD+ L Y Sbjct: 64 VAQSSGSNVAVNNGAVSGGISDAKPQDTAPRILIDAPLITGSISVMGARIDDVVLTDYKE 123 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 S +T L +++ +F E + S+ N +P ++T+W + +L+P P+ L Sbjct: 124 TQDPESKNITFLHKASSSQPFFVEFGWSSSDANQPMPRADTLWQ-TNKDVLSPGAPVTLR 182 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + N + F R IS+++ YL D+V + I P G + RH + + + EG Sbjct: 183 WDNGQGLTFIRQISINDDYLISYDDSVQSTLDAAITLFPYGLVRRHGTPPTSGIYILHEG 242 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESN----SWLGISDKYWASVFIPSKETSFHSQF 275 + V ++L E+ YSD+ + + W+G++DKYW + +P + T + F Sbjct: 243 PLGVFD-ETLQEEDYSDLRDAEQGKIAVTPSKAGGWIGLTDKYWLAALLPDQNTRYDFSF 301 Query: 276 KYLSDGHARYQAKFS-ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 + L+ RYQ + + + + P S++ +FAGAK + Y +DL IP F++ I Sbjct: 302 QSLAGSGERYQVDYIDSKGLVLAPNTSVSAKGRVFAGAKIVKLLDQYREDLGIPNFDLAI 361 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GWFYF+ KP F +++ L+GNFG+A + TV VK++FFPLA K Y S M+ + P Sbjct: 362 DFGWFYFLTKPFFYAINWLNELLGNFGLATIAFTVVVKVVFFPLANKSYQSMGKMRLLAP 421 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 KI +LRE+F L K M+ LYK +NP AGC P+LLQIPVFFA+YKV+ +++EMR Sbjct: 422 KIQQLRERF-GEDKMALNKEMMALYKAEKVNPAAGCLPVLLQIPVFFALYKVLFVTIEMR 480 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYL---PGFMHVGIWPIIMSLSMFIQMKMSPPP 511 HAPF+GWI DL+A DPT+IF +FG+LPF + P F+ +G WPI+M +SMF+QM+++P P Sbjct: 481 HAPFFGWITDLSAPDPTSIFNVFGLLPFSVDFLPPFLQLGAWPIMMGVSMFLQMRLNPAP 540 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 D QA + MP+ F F L++FPAGL+IYW+W+N++S+ QQ IM+ Sbjct: 541 PDPIQAKVFQLMPIFFTFLLATFPAGLVIYWTWNNLLSMGQQWYIMRR 588 >gi|294675902|ref|YP_003576517.1| inner membrane protein OxaA [Rhodobacter capsulatus SB 1003] gi|294474722|gb|ADE84110.1| inner membrane protein OxaA [Rhodobacter capsulatus SB 1003] Length = 615 Score = 411 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 222/618 (35%), Positives = 326/618 (52%), Gaps = 44/618 (7%) Query: 1 ME-RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ +N N +A LS +++ W F+ P+ E + P + AA ++ Sbjct: 1 MDNQNRNLILATVLSALVIVVWTVFFPPPKPEPTDPAVAEQTATPAPTAAPVATAAPAVE 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS----- 114 +A PRV + P+L GSI+L GA+FDDL+L+ YH + SP+V LL+P Sbjct: 61 PAPEA----PRVTIDTPALTGSISLLGARFDDLSLKHYHEKLDPASPLVRLLAPVGGSDL 116 Query: 115 NTKNAYFAELDYVSTAN--NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 N Y+ + + A ++P T+W +G LTP TP+ L + N + F RTI Sbjct: 117 NAAKPYYVVQGWSALAGVTAAQVPGPKTLWTAPAGAKLTPETPLVLTWDNGAGLTFTRTI 176 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG----DKS 228 ++D YLF + D VTN + +P G I RH + + EG + + + Sbjct: 177 AVDPQYLFTVTDAVTNTGAAAVSIAPWGIIARHGIPAGNRVYVLHEGAVRMTNGELQEIK 236 Query: 229 LVEQKYSDIEKSSISNFHESN---SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + D + S W G +DKYW + IP F S KY+ Y Sbjct: 237 YKKITDLDALEGEGQADVRSADTGGWAGFTDKYWMTTLIPDT-ARFTSVVKYVPSA-DLY 294 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA----------------IPR 329 Q + + I G S + T LFAGAKE+ I Y+ D I R Sbjct: 295 QTETRQPAVEIAAGASTSVTMRLFAGAKEWEAIAQYQNDPGMFDRLFGDKIDPTQPQITR 354 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F IDWGW+YF+ KPMF L+ + + ++GN G AI+ TV +KL+ FPLA+ Y+S A M Sbjct: 355 FVDSIDWGWYYFLTKPMFRLLHWLHAVLGNMGWAIIALTVIIKLIVFPLARTSYISMAKM 414 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K IQP ++ L+E+ K Q LQ+ M++LYK INP AGC PILLQIP+FF++YKVI + Sbjct: 415 KEIQPAMEALKERTKDDK-QALQRGMMELYKREKINPAAGCLPILLQIPIFFSLYKVIYV 473 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP------GFMHVGIWPIIMSLSMFI 503 ++E+ HAP+ GWIKDL+A DP++I LFG+LP+ P +G+ PI++ +SM+ Sbjct: 474 TIELYHAPWIGWIKDLSAPDPSSILNLFGLLPYATPEPGSLLFIFSLGVLPILLGISMWF 533 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q K++P P D QA I WMP +F+F L F +GL++YW +NVI+ +QQ IM +HG Sbjct: 534 QQKLNPAPTDPSQAAIFAWMPWIFMFMLGGFASGLVLYWIANNVITFIQQYSIMSLHGKR 593 Query: 564 IGLIDRLRSTFSKNYNSQ 581 L + + F K + Sbjct: 594 PDLFGNIIAGFRKKTAEE 611 >gi|157964113|ref|YP_001498937.1| putative inner membrane protein translocase component YidC [Rickettsia massiliae MTU5] gi|166977409|sp|A8F0F4|OXAA_RICM5 RecName: Full=Inner membrane protein oxaA gi|157843889|gb|ABV84390.1| Preprotein translocase subunit YidC [Rickettsia massiliae MTU5] Length = 560 Score = 411 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 238/562 (42%), Positives = 342/562 (60%), Gaps = 4/562 (0%) Query: 1 MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M N N AI LS+ I++ WQ F V P ++ + + Q + Sbjct: 1 MNNNIINLVAAIILSLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATG 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 Q S R+++++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SPSNT+NA Sbjct: 61 IVVQEESQIQRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPSNTENA 120 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 YFAE+ VS ++++LPN++T+WN +IL+P P+ L + N + + F TI++DE+YL Sbjct: 121 YFAEIGLVSNLSSVKLPNNDTIWN-SDSEILSPEKPVHLFWVNEDGVKFLVTITVDENYL 179 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F I T+ N S ++ G I R + +G I + + +K Sbjct: 180 FTIEQTIVNYSDKELPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDK 239 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILP 298 S W+GI+DKYW S IP K +++ S F Y L G RYQ F + I P Sbjct: 240 KSEKFAASKVDWIGITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKP 299 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G++ + + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VG Sbjct: 300 GENFSIKSRIFAGAKKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVG 359 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 NFG++I++ TV +KLL F LA K Y S MKN+QP+ID ++ + L + ++ L Sbjct: 360 NFGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMAL 418 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP+AGC PIL+QIPVFF+IYKV+ +++EMR PF+GWIKDL+A DPT IF LFG Sbjct: 419 YKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQTPFYGWIKDLSAPDPTTIFNLFG 478 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 +LPF P F+ +G WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL Sbjct: 479 LLPFSPPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGL 538 Query: 539 IIYWSWSNVISIVQQAVIMKMH 560 +IYWSW+N++SI+QQ I K + Sbjct: 539 LIYWSWNNILSIIQQYYINKFN 560 >gi|114770125|ref|ZP_01447663.1| putative inner membrane protein translocase component YidC [alpha proteobacterium HTCC2255] gi|114548962|gb|EAU51845.1| putative inner membrane protein translocase component YidC [alpha proteobacterium HTCC2255] Length = 612 Score = 411 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 215/609 (35%), Positives = 341/609 (55%), Gaps = 37/609 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--------KNIQTVKQPNQVDNSY 53 + N N +A LS++++ W F+ + + + T + Sbjct: 4 DNNKNMILASVLSMLVLLTWFYFFPQEDYQPVATNQITASENGIAAAPTAGNGIASAPAI 63 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + + + R AL + RVE+++ + GS++L GA+ DDL L Y++ ++ S VTLLSP Sbjct: 64 STTVAETREIALEKTKRVEIRSNRIKGSLSLTGARIDDLKLLDYNVKLNDTSEKVTLLSP 123 Query: 114 SNTKNAYFAELDYVSTANNI--ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + +AY+ + + ++P + T+W++ +G ILTP + + L + N+N ++F R Sbjct: 124 AGGPSAYYILHGFSPAGSLDFDDVPTATTIWSVENGNILTPNSSVTLKWDNSNGLVFYRK 183 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP---------QTATNTFGVQEGFIA 222 I +D+ Y+F I +V NN+ I +P G I + P +++ N + I Sbjct: 184 IEVDDDYMFTITQSVQNNTNANISLAPYGLIAQKGPIARAAYGRQESSKNGVYILHEGIV 243 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHE---------SNSWLGISDKYWASVFIPSKETSFHS 273 + SL E YSD+ S+ W+G + KYW + IP ++F + Sbjct: 244 LQTGSSLEEIDYSDMPDEDFSSSERANLKVVDSTKKGWIGFTGKYWMTTLIPD-NSAFKA 302 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 KY +G RYQA+ I IL G+ + LFAGAKE+ TI HY + F Sbjct: 303 VSKYT-EGADRYQAEARQETIQILAGQRRDVQSRLFAGAKEYATIQHYGDKEGVTDFVDS 361 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 IDWG F+FI KPMF L+ + L+GN G AI+ T+ +K + FPLA K +VS A MK +Q Sbjct: 362 IDWGMFFFITKPMFALLHFLNGLIGNMGWAIIALTLIIKTILFPLAYKSFVSMARMKELQ 421 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++++L+EK Q +QKA +++Y+T +NP AGC PILLQIP+FF++YKVI ++LE+ Sbjct: 422 PEMEKLKEKH-GEDRQAMQKATMEMYRTKKVNPAAGCLPILLQIPIFFSLYKVIFVTLEL 480 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKM 507 RHAPF GW+KDL+ DP+++ LFG++P+ PG + +G+WPI+M ++M++Q K+ Sbjct: 481 RHAPFIGWLKDLSVPDPSSLLNLFGLMPWDAPGPNSFFVILSIGVWPILMGITMWLQQKL 540 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 +P P DK QAMI WMP VF+F L F +GL+IYW +N ++ +QQ IM+ G ++ Sbjct: 541 NPAPTDKTQAMIFAWMPWVFMFMLGGFASGLVIYWVANNTLTFMQQYTIMRSQGVNPDIL 600 Query: 568 DRLRSTFSK 576 + F K Sbjct: 601 GNMFKRFKK 609 >gi|85374954|ref|YP_459016.1| putative inner membrane protein translocase component YidC [Erythrobacter litoralis HTCC2594] gi|84788037|gb|ABC64219.1| preprotein translocase subunit [Erythrobacter litoralis HTCC2594] Length = 581 Score = 411 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 196/571 (34%), Positives = 307/571 (53%), Gaps = 18/571 (3%) Query: 1 MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNE------RKNIQTVKQPNQVD 50 M+ N +A+ L +++ W FY P E + +D Sbjct: 1 MDNQRNLLLAVVLCGVLIIGWDAAMNYFYPQPAEPIEAVEGSPTVASAPVAGSSTAATLD 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 N AA + + AL+ R+ + P + GSINL GA+ DD+ L+ + V +S V + Sbjct: 61 NGAAAQGPVELSDALATPERIRIDAPRVEGSINLVGARIDDIELKDHRATVDEDSGPVQM 120 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 +P NT YFA+ +V + LP S+TVW+ G+ LT P+ L + N F Sbjct: 121 FAPQNTDAQYFAQFGWV--GEGVSLPTSDTVWS-ADGETLTQGNPVTLSWDNGAGQQFRI 177 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 S+D++Y+ T N + P I R +T+T+ G + V GD + Sbjct: 178 RFSIDDNYMITAEQTAANTGGGPVVARPFATITRTSETASTDTWIAHSGPMGVFGDSADY 237 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 Y D+ + WLG SD Y+ +P + + F+ G ++A Sbjct: 238 GPDYDDLADDGPYSGEGKARWLGFSDIYFLGALVPQADADPQTGFR--PIGENLFRADVI 295 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 T+ PG ++ T LFAGAKE + Y +D I +F + IDWGWF + KP+ L+ Sbjct: 296 YQPATVAPGNEVSRTTQLFAGAKESEILDQY-EDAGIDKFGLAIDWGWFRWFEKPLLWLL 354 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + ++LVGNFG+AI+L TV ++ L FP+A+KQ+ S A MK +QPK+ ++EK+K Q Sbjct: 355 NQLFDLVGNFGVAIILLTVIIRGLLFPIAQKQFGSMAAMKAVQPKMKAIQEKYKDDK-QK 413 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 Q+ ++ LYK +NPLAGC P+L+QIP+FFA+YKV+ +++EMRH PF WI+DL+A DP Sbjct: 414 QQQEIMALYKEEKVNPLAGCLPLLIQIPIFFALYKVLILAIEMRHQPFALWIEDLSAPDP 473 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 +IF LFG+LPF +PG + +G +++ ++M++ +M+P D Q I N MP V +F Sbjct: 474 AHIFNLFGLLPFEVPGLIAIGPLAVLLGVTMWLTFQMNP-VTDPIQRQIFNIMPWVLMFI 532 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ F AGL++YW+ SNV+++ QQ + H Sbjct: 533 MAPFAAGLLLYWNTSNVLTLAQQRYLYSKHP 563 >gi|15603927|ref|NP_220442.1| putative inner membrane protein translocase component YidC [Rickettsia prowazekii str. Madrid E] gi|38503265|sp|Q9ZE97|OXAA_RICPR RecName: Full=Inner membrane protein oxaA gi|3860618|emb|CAA14519.1| 60 KD INNER-MEMBRANE PROTEIN (yidC) [Rickettsia prowazekii] gi|292571645|gb|ADE29560.1| Preprotein translocase subunit YidC [Rickettsia prowazekii Rp22] Length = 560 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 241/562 (42%), Positives = 344/562 (61%), Gaps = 4/562 (0%) Query: 1 MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M N N A+ LS+ I++ WQ F+V P ++ ++ Q + A D Sbjct: 1 MNNNIINLIAAVVLSLSIIFGWQYFFVKPEQKKQQQRIAMHKSENLNKQKLKALAEPASD 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 Q S R+++++ SL GSI LKG +FDDL L+ Y D+S NSP V L SP+NT+NA Sbjct: 61 IAVQEASQVQRIKIESESLTGSIALKGLRFDDLILKKYKQDLSQNSPAVRLFSPANTENA 120 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 YFAE+ VS N+++LPNSNTVWN ++L+P P+ L + N + I F TI++D++YL Sbjct: 121 YFAEIGLVSNLNSVKLPNSNTVWN-SDSEVLSPEKPVNLFWINEDGIKFLVTITVDKNYL 179 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F I T+ NNS ++ G I R + +G I + + +K Sbjct: 180 FTIEQTIINNSDKELPVQSYGLINRKYISLEKAVNILHQGPIGCIDENLKEYSYDDIKDK 239 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILP 298 S W+GI+DKYW S IP K + + S F Y L G RYQ F + I P Sbjct: 240 KSTKFALSKVDWIGITDKYWLSSLIPDKSSRYSSNFNYALKQGTERYQVDFISPVQVIKP 299 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G++++ + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VG Sbjct: 300 GENLSIKSRIFAGAKKVDLLDEYEKSYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVG 359 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 NFGI+I++ TV +KLL F LA K Y S MKN+QP+ID ++ + L + ++ L Sbjct: 360 NFGISILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYNNDKA-RLNQEIMAL 418 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP+AGC PIL+QIPVFF+IYKV+ +++EMR APF+GWIKDL++ DPT IF LFG Sbjct: 419 YKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAPFFGWIKDLSSPDPTTIFNLFG 478 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 +LPF P F+ +G WPI+M+++MF+ KMSP AD QA ++ +MP++F+F SSFP GL Sbjct: 479 LLPFAPPSFLMIGAWPILMAITMFLHQKMSPELADPIQAQVMKFMPLIFLFMFSSFPVGL 538 Query: 539 IIYWSWSNVISIVQQAVIMKMH 560 +IYWSW+N++SI+QQ I K + Sbjct: 539 LIYWSWNNILSIIQQYYINKFN 560 >gi|262277963|ref|ZP_06055756.1| 60 kDa inner membrane insertion protein [alpha proteobacterium HIMB114] gi|262225066|gb|EEY75525.1| 60 kDa inner membrane insertion protein [alpha proteobacterium HIMB114] Length = 560 Score = 410 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 207/566 (36%), Positives = 326/566 (57%), Gaps = 10/566 (1%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD- 60 N N A+ LS ++ WQ +Y P + N E+ Q +K S + ++ Sbjct: 1 MENKNVLAAVVLSTFVIMMWQFWYGEPVPQTQNQEQVQQQQLKGDKPSAPSISQKKVETK 60 Query: 61 --RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R+ A++ R++++N ++ GSI L GA DD+ L+ Y+ D + + V LL+P Sbjct: 61 LTRSDAINQGDRIKIENSAVEGSIALTGALIDDVTLKNYNQDNTGDQTKVILLNPKKYDQ 120 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 AYF E + T+ N +P++ T+W K LTP TP++L + N + F + ++D+ Y Sbjct: 121 AYFLETGWA-TSGNEIVPDNQTLWTAKGNKTLTPNTPVELEWNNGQGLTFIKKFTIDDQY 179 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 L I + + NNS + +I R + + F + EG + ++ + E D Sbjct: 180 LITINEEIKNNSNQTVNLFHYAQITRQEKPEIQDFFILHEGLLGIVDETLTEE--DYDDI 237 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 F+ S W+GI+DKYW + IP K +F ++F Y + Y + TI Sbjct: 238 VEKKKTFNGSQGWVGITDKYWLTAIIPEKGKNFKAEFSYDKSFKSNYII---TDATTINV 294 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 ++ + + LF GAKE I Y +F++ IDWGWF+F KP+F ++ Y + G Sbjct: 295 NQTGSNISNLFIGAKEVSVIDGYTASNGFHKFDLAIDWGWFHFFTKPLFFIIDYLFKWCG 354 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 NFGIAI+L T V+L+FFPLA + S A MK +QP++ L++ +K+ Q +Q M+ L Sbjct: 355 NFGIAIILLTAGVRLIFFPLANYSFASMAKMKALQPEMQRLKDLYKEDK-QKIQMEMMNL 413 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP++GC P++LQIP FFAIYK++ +++EMRHAPF+GWI+DL+AADPT+IF LFG Sbjct: 414 YKREKVNPISGCLPVMLQIPFFFAIYKMLFVTIEMRHAPFYGWIQDLSAADPTSIFNLFG 473 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 ++P+ PGF+ +G WPIIM ++M+IQ K++P P D QA I + P L+SFP+GL Sbjct: 474 LIPWDPPGFLIIGAWPIIMGVTMYIQQKLNPAPPDPIQAKIFMFFPFFLTILLASFPSGL 533 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEI 564 +IYWS +NV+++ QQ VI++ + Sbjct: 534 VIYWSVNNVLTMAQQYVIIRKTKVKT 559 >gi|103485502|ref|YP_615063.1| putative inner membrane protein translocase component YidC [Sphingopyxis alaskensis RB2256] gi|98975579|gb|ABF51730.1| 60 kDa inner membrane insertion protein [Sphingopyxis alaskensis RB2256] Length = 584 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 204/583 (34%), Positives = 313/583 (53%), Gaps = 27/583 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N AI LSV I+ W F+ P ++ + Sbjct: 1 MDDKRNLIAAILLSVAILIGWNFVAERFFPTPDQPDVTKTVAGANGAPATAPTAQGQPSA 60 Query: 57 LID-------------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 L L+ R+ ++ P++ GSINL GA+ DD+ L Y + Sbjct: 61 LPAPTAATPAAAQAIRPVDVVLAEGQRIPIETPAIRGSINLVGARIDDITLTKYRQTIKK 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +SP V L +P T AYFA L + TA I+LP + TVW +G LTPTTP+ L + N Sbjct: 121 DSPAVRLFAPGGTPAAYFASLGW--TAQGIQLPGAGTVWT-ANGTKLTPTTPVTLSWTNT 177 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT---NTFGVQEGF 220 F S+D +YL TV N + S I R T +++ + G Sbjct: 178 TGQTFRIEYSIDANYLITAKQTVVNAGTAPVSLSSFALIDRLGKPTDPHEVDSWTIHVGP 237 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 L KS+ + Y D+E++ + + S WLG +DKYW + +P+K + Sbjct: 238 TGYLDGKSVFDIDYDDLEEAPNRSVRYTSAGWLGFTDKYWLAAIVPAKGERVTAAISSP- 296 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 YQ F+ + + PG+ +T T+ +FAGAKE + Y+ D I R IDWGWF Sbjct: 297 -ATNNYQTLFARDFTQVAPGQQLTATSRIFAGAKEVEILETYQDDQGITRLSNAIDWGWF 355 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 F P+F L+ + + VGNFG+AIM T+ ++LL FP+A +Q+ S A M+ +QPK+ L Sbjct: 356 EFFEVPIFKLLHWLFEKVGNFGLAIMALTLIIRLLMFPIANRQFSSMAQMRVVQPKMKAL 415 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E++K P +Q+ +++LYK INPLAGC PI++QIP+F+A+YKV+ +++EMRH PF Sbjct: 416 QERYKDDKP-RMQQELMKLYKDEKINPLAGCLPIVIQIPIFYALYKVLMLAIEMRHQPFI 474 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WIKDL+A DP +I LFG+LPF P + +G+ +I+ ++M++Q +++P PAD QA + Sbjct: 475 LWIKDLSAPDPLHILNLFGLLPFTPPSILAIGLLAVILGVTMWLQFRLNPAPADPVQAQV 534 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP +F+F ++ F AGL++YW +N++SI QQ + + A Sbjct: 535 FKIMPWLFMFIMAPFAAGLLLYWITNNILSIGQQQWMYRKFPA 577 >gi|83859293|ref|ZP_00952814.1| putative inner membrane protein translocase component YidC [Oceanicaulis alexandrii HTCC2633] gi|83852740|gb|EAP90593.1| putative inner membrane protein translocase component YidC [Oceanicaulis alexandrii HTCC2633] Length = 672 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 223/595 (37%), Positives = 347/595 (58%), Gaps = 23/595 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYP------RIEEMNNERKNIQTVKQPNQVDNSYA 54 M N N+ +A +++ I++ +Q F + P E+ E + +T Q +S Sbjct: 1 MGENRNFLLAAVIAIGILFFYQAFILDPMARDREAAEQATAETQVQETGDDAPQATDSGF 60 Query: 55 AV----LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 A R AL+ S R+E++ +L GS++L GA+ DDL L Y +V S P VTL Sbjct: 61 AAGLGENGMSREDALARSQRIEIRTEALSGSLSLTGARIDDLQLLRYETEVDSGVP-VTL 119 Query: 111 LSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 +SP FA ++ AN + LP +T W L+ G +LT TTP+ L + + F Sbjct: 120 MSPEGFDGYQFAASGWLGGANAPQGLPGLSTNWTLVEGDVLTETTPVVLEHAAGD-LTFR 178 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKS 228 RTIS+DE+YLF + DTV NN + P + +H P N F + EG + V+ Sbjct: 179 RTISVDENYLFTVNDTVINNGSAAVSLRPYALVRQHGVPADLQNFFVLHEGAVGVIDGTH 238 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQA 287 ++K+ E + + W+GI+ KYW + P + + +QF+ +S +++ Sbjct: 239 F-DRKFKKWEDEGLIERNGPGGWMGITSKYWLAAVAPEGQPNVRAQFRVVSRPDRPVFES 297 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + ++ T+ PG ++ +T+++FAGAK+ P + YE DL I R M IDWG F+F+ +P F Sbjct: 298 NYLSDAETLAPGATLESTSYVFAGAKKQPILAAYENDLGIDRLTMAIDWGMFWFLTRPFF 357 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 + +FY ++GN+G+AIM+ T+ +KL+ FPL + + S A M++ PK+ E+RE++K Sbjct: 358 AALHFFYGVLGNYGLAIMVVTLLIKLVLFPLNNRAFASMAKMRSAAPKMTEIRERYKD-D 416 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 PQ QKAM++LY+ INP+AGC P+L QIP+FFA+YK + ISL+ RHAPF+GWI+D++A Sbjct: 417 PQAQQKAMMELYRKERINPVAGCLPMLPQIPIFFALYKTVFISLDARHAPFFGWIQDMSA 476 Query: 468 ADPTNIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 DPT I LFG+LP+ G + +G+WP++M ++M+ Q ++PPPADK Q I Sbjct: 477 PDPTMIGNLFGLLPYDPSGLPIVGPILAIGVWPLLMGVTMWAQQSLNPPPADKIQRQIFA 536 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +MPV+F ++ FPA LIIYWSW+N ++I QQ +IM+ G L SK Sbjct: 537 FMPVIFTIIMAPFPAALIIYWSWNNTLTIGQQYLIMRRQGVVTELDRNFFKLRSK 591 >gi|157825202|ref|YP_001492922.1| putative inner membrane protein translocase component YidC [Rickettsia akari str. Hartford] gi|166977406|sp|A8GLY9|OXAA_RICAH RecName: Full=Inner membrane protein oxaA gi|157799160|gb|ABV74414.1| putative inner membrane protein translocase component YidC [Rickettsia akari str. Hartford] Length = 560 Score = 406 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 231/562 (41%), Positives = 343/562 (61%), Gaps = 4/562 (0%) Query: 1 MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M N N AI LS+ I++ WQ F + P ++ + + Q + D Sbjct: 1 MNNNIINLIAAIVLSLSIIFGWQYFVIKPEQKKQQQQIAVQKAANLKKQQLKALVEPATD 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 Q S R+++++ SL GSI+LKG +FDDL L+ Y D+S NS V L SP+NT+++ Sbjct: 61 IVVQEESQVQRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSSDVVLFSPTNTEHS 120 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 YFAE+ VS ++++LPN++T+W+ G+IL+P P+ L + N + + F TI++D++YL Sbjct: 121 YFAEIGLVSNLSSVKLPNNDTIWS-SDGEILSPEKPVNLFWVNEDGVKFLVTITVDKNYL 179 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F I T+ NNS ++ G I R + +G I + + +K Sbjct: 180 FTIEQTIVNNSDKELPIQSYGLINRKYTAVEKAVNILHQGPIGCIDENLKEYSYDDIKDK 239 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILP 298 S W+GI+DKYW S IP K +++ S F Y + G +YQ F + I P Sbjct: 240 KSEKFAASKVDWIGITDKYWLSALIPDKSSNYSSNFNYAVKQGIEKYQVDFISPVQIIKP 299 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G++ + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VG Sbjct: 300 GENFAIKSRIFAGAKKVDLLDQYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVG 359 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 NFG++I++ TV +KLL F LA K Y S +KN+QP+ID ++ + L + ++ L Sbjct: 360 NFGVSILIVTVIIKLLMFTLANKSYRSMKKIKNLQPEIDRIKNLYSDDKA-RLNQEIMAL 418 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP+AGC PIL+QIPVFF+IYKV+ +++EMR A F+GWIKDL+A DPT IF LFG Sbjct: 419 YKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAQFYGWIKDLSAPDPTTIFNLFG 478 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 +LPF P F+ +G WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL Sbjct: 479 LLPFSPPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGL 538 Query: 539 IIYWSWSNVISIVQQAVIMKMH 560 +IYWSW+N++SI+QQ I K + Sbjct: 539 LIYWSWNNILSIIQQYYINKFN 560 >gi|16125020|ref|NP_419584.1| putative inner membrane protein translocase component YidC [Caulobacter crescentus CB15] gi|221233743|ref|YP_002516179.1| inner membrane protein translocase component YidC [Caulobacter crescentus NA1000] gi|38503160|sp|Q9AA40|OXAA_CAUCR RecName: Full=Inner membrane protein oxaA gi|254772763|sp|B8H1E8|OXAA_CAUCN RecName: Full=Inner membrane protein oxaA gi|13422004|gb|AAK22752.1| 60 kd inner-membrane protein [Caulobacter crescentus CB15] gi|220962915|gb|ACL94271.1| inner membrane protein translocase component yidC [Caulobacter crescentus NA1000] Length = 615 Score = 406 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 213/614 (34%), Positives = 330/614 (53%), Gaps = 37/614 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV-------DNSYA 54 N N + I + I+ +Q F + P+ ++ E + + +Q + N Sbjct: 3 NDNKNTLMFIVSAFAILIGYQFFVLGPQQKKAEAEFRAKKAAEQQSAAKAGVTLDANGNP 62 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 A L R A ++SPR+E+ P+L GSI LKGA+ DDL LR Y +SP V L P Sbjct: 63 APLRLSRDAAKALSPRIEVDTPALSGSIALKGARIDDLFLRKYDETTKKDSPPVELFRPE 122 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 ++A+FA+ + AN LP+S TVW G++L P +P+ L + N + F R I++ Sbjct: 123 GAEHAWFADFGWAG-ANLPGLPDSRTVWTAAPGQVLRPNSPVTLTYDNGLGLTFTRVIAV 181 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT----FGVQEGFIAVLGDKSLV 230 D+ +F + D+V NN + ++ +P + R A G + ++ L Sbjct: 182 DDQAMFTVTDSVKNNGTNGLQLAPYATVQRQGISDALGKNQIVHEGAIGVLGATDEQKLE 241 Query: 231 EQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAK 288 KY +K + +F W GI+DKYW + IP + + +Q++ + G Y Sbjct: 242 MAKYGKWKKDKPLQSFDSVGGWTGITDKYWLAALIPGQNQAIKAQYRVTNVAGIDVYDVN 301 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------------IPRFEML 333 F + PG +++ T LFAGAK P + YE IPRF+ Sbjct: 302 FLGPVQVLNPGATVSQTTRLFAGAKTVPLLRKYEYGATPAPAIWEFWNKTKAEIPRFDDA 361 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +DWG F F +P+F ++ FY LVGNFG+AI+L TV +KL+ +P+A K Y S A MK I Sbjct: 362 VDWGMFRFFTRPIFNILEVFYKLVGNFGLAILLLTVVLKLVLYPMADKSYESMAKMKKIA 421 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++++L+ K K P + Q+ M+ LY+ INP+ GC P+L+QIPVF+A+YKV+++++EM Sbjct: 422 PEVEKLKAKHKDDPAK-QQQEMMALYQKEKINPMMGCLPMLIQIPVFYALYKVLTVTIEM 480 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-------IWPIIMSLSMFIQMK 506 RHAPF+GWI+DL+A DPT +F LFG++P+ +G +WP++ +M++ Sbjct: 481 RHAPFFGWIQDLSAPDPTTMFNLFGLIPWDPGSLPLIGAMIAHLGVWPLLYGFTMWLTTA 540 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 M+PP D Q I W PV+F F LS F GL+IYW WSNV++I QQ +IM+ + E + Sbjct: 541 MNPPAGDPIQQKIFQWFPVIFTFTLSGFAVGLVIYWCWSNVLTIFQQYIIMRRYKVENPI 600 Query: 567 IDRLRSTFSKNYNS 580 + K + Sbjct: 601 DQIIARLRGKTAGA 614 >gi|304322173|ref|YP_003855816.1| 60 kDa inner membrane insertion protein [Parvularcula bermudensis HTCC2503] gi|303301075|gb|ADM10674.1| 60 kDa inner membrane insertion protein [Parvularcula bermudensis HTCC2503] Length = 589 Score = 405 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 192/594 (32%), Positives = 327/594 (55%), Gaps = 24/594 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID- 59 M+ N +A+ LS ++++ ++ + P+ ++ Q + + Sbjct: 1 MD--RNVIIALVLSTLLLFGYEALVLGPKRAAYLEAQEKAQAIAAEQMDPADAGETFLPG 58 Query: 60 -----DRAQALSMS-PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 R QAL+ R+ ++ P+L GS+NL+G FDDL L+ Y ++++SP + LLSP Sbjct: 59 TERSLSREQALAEGTARLPIETPTLSGSVNLEGLLFDDLILKTYRATLAADSPPIVLLSP 118 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 F + + W G +LTP TP +V + +I + T++ Sbjct: 119 RTATTPQFMRAGLSIGG----VSDRTARWQAPEGAVLTPKTP-VIVTRQEGDIQYRATLA 173 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVEQ 232 +DE ++F++ VTN S + + P G + P N + EG I V+ L+++ Sbjct: 174 VDEQFMFRVTYEVTNGSGETVVAQPYGAAYQRGIPADLQNFMILFEGPIGVVDH-RLMDR 232 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 KY + S W+GI+DKYW S IP ++T F ++ ++A + Sbjct: 233 KYKKLLSGGGIEDRGSGGWVGITDKYWLSAAIPPQDTPFKAELDVTDGAIPLFRASYLLE 292 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 +I PG +I T +L+ G+KE + Y+ L I RF +DWG F F+ +P+F ++++ Sbjct: 293 TQSIAPGATIRTEAYLYGGSKEVEVLRMYQDQLGIDRFVWAVDWGHFSFLTRPIFGILAF 352 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F L GN+G+AI+L T+ +K + FPLA Y S A MK +QP++ ++RE++ + Q Sbjct: 353 FEGLTGNWGVAILLLTLVIKAVLFPLANMSYKSMAGMKKVQPELMKIRERYTDDKTK-QQ 411 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+ LYK H INP AGC P+L Q+P+F+A+YK + +++E+RH P + +I DL+ DPT+ Sbjct: 412 QEMMALYKKHKINPAAGCLPVLAQMPIFYALYKTLFVTIELRHEP-FLYIPDLSEQDPTS 470 Query: 473 IFTLFGILPFYLP------GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 +F LFG+LPF F+ +GI P++M +MF+Q+K++PPP D Q MI MP++ Sbjct: 471 VFNLFGLLPFDPTTVPLIGSFLGIGILPLLMGAAMFVQLKLNPPPPDPTQRMIFGLMPLI 530 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 F+F + F AGL++YW W+ +S++QQ +IMK GA++ ++ ++ +F K + Sbjct: 531 FMFIFAPFAAGLVLYWFWNTFLSVIQQYIIMKRQGADVDILGNIKQSFGKAPQA 584 >gi|238650515|ref|YP_002916367.1| putative inner membrane protein translocase component YidC [Rickettsia peacockii str. Rustic] gi|259515722|sp|C4K168|OXAA_RICPU RecName: Full=Inner membrane protein oxaA gi|238624613|gb|ACR47319.1| putative inner membrane protein translocase component YidC [Rickettsia peacockii str. Rustic] Length = 560 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 232/548 (42%), Positives = 338/548 (61%), Gaps = 3/548 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + Q S R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATGIVVQEESQVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GS++LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSVSLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN +IL+P P+ L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWN-SDSEILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 + G I R + +G I + + +K S W+G Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFAASKVDWIG 253 Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 I+DKYW S IP K +++ S F Y L G RYQ F + I PG++ + + +FAGA Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENFSIKSRIFAGA 313 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 K+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV +K Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 LL F LA K Y S MKN+QP+ID ++ + L + ++ LYK +NP+AGC P Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF P F+ +G Sbjct: 433 ILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPFSPPSFLMIGA 492 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+Q Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552 Query: 553 QAVIMKMH 560 Q I K + Sbjct: 553 QYYINKFN 560 >gi|157827949|ref|YP_001494191.1| putative inner membrane protein translocase component YidC [Rickettsia rickettsii str. 'Sheila Smith'] gi|166977410|sp|A8GQK8|OXAA_RICRS RecName: Full=Inner membrane protein oxaA gi|157800430|gb|ABV75683.1| putative inner membrane protein translocase component YidC [Rickettsia rickettsii str. 'Sheila Smith'] Length = 560 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 234/548 (42%), Positives = 338/548 (61%), Gaps = 3/548 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + Q S R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATGIVVQEESQVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN +IL+P P+ L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWN-SDSEILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 + G I R + +G I + + +K S W+G Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFAASKVDWIG 253 Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 I+DKYW S IP K +++ S F Y L G RYQ F + I PGK+ + + +FAGA Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGIERYQVDFISPVQIIKPGKNFSIKSRIFAGA 313 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 K+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV +K Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 LL F LA K Y S MKN+QP+ID ++ + L + ++ LYK +NP+AGC P Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF P F+ +G Sbjct: 433 ILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPFAPPSFLMIGA 492 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+Q Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552 Query: 553 QAVIMKMH 560 Q I K + Sbjct: 553 QYYINKFN 560 >gi|121602508|ref|YP_989323.1| putative inner membrane protein translocase component YidC [Bartonella bacilliformis KC583] gi|120614685|gb|ABM45286.1| inner membrane protein, 60Kd [Bartonella bacilliformis KC583] Length = 612 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 259/610 (42%), Positives = 372/610 (60%), Gaps = 30/610 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N N+F+AI LS+II AW Y+ P+ E + N + Q + N +Y A ++ Sbjct: 1 MEYNRNFFIAIGLSLIIFVAWHFLYIVPQHENLKNAQTIEQQALKQNPASPTYDADFSNN 60 Query: 61 ------------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 R L+ + R+ +K L GSINL GAQFDDL L+ YHL V Sbjct: 61 AQTNQSRLTADRSMTPEIRRAELAKTDRITIKTDELEGSINLVGAQFDDLFLKKYHLTVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLIS-GKILTPTTPIKLVF 160 SP ++LL+P+ K +Y AE + S++ + LP SNT W + S ILTP+TP+ LV+ Sbjct: 121 KTSPQISLLNPNGFKTSYLAEFGFTSSSLPEKALPQSNTQWQIESENTILTPSTPVTLVY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 N +F RTIS+D+HY+F I D++ N S + + S R+ R P + Sbjct: 181 NNGQGQIFRRTISIDDHYMFTIEDSINNESDNPVHLSSYARVARAAPPEHAQATYLLHEG 240 Query: 221 IAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + SL + Y + + S++ + W+GI+DKYWA IPS+ + Sbjct: 241 MIGIAGNSLKTETYEALSELTLNPEDGQKSLTFQKVTGGWIGITDKYWAVAVIPSQNQEY 300 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 S+F Y + YQ+ + ++I P ++ T N+LFAGAK I+ Y+ L I +F Sbjct: 301 TSRFVYFDRLNTHYQSDLQSALLSIAPRETKTIINYLFAGAKRVEIINQYQNQLQIKKFG 360 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +LIDWGWF FI KPMF L+ Y GNFGIAI+LTTV +K L FPLA K Y+S A MK Sbjct: 361 LLIDWGWFDFITKPMFSLIHILYEQTGNFGIAILLTTVLLKTLLFPLANKSYISMARMKI 420 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 IQP + E++EK+ + + A+IQLYKT INPLAGC P+L+Q P+FFA+YKV+ I+L Sbjct: 421 IQPMMQEIKEKYAEDRVKQQH-AIIQLYKTQKINPLAGCLPMLIQFPIFFALYKVLYITL 479 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 EMRHAPF+GWI+DLAA DPT+IF LFG LP+ +P F +G WP++M ++MF+QM+M+PPP Sbjct: 480 EMRHAPFFGWIQDLAAPDPTSIFNLFGFLPYAVPAFFVIGAWPLVMGITMFLQMQMNPPP 539 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D QA + W+P++F F L+SFPAGL+IYW+W+N +SI+QQ++IMK G +I L + ++ Sbjct: 540 VDPIQATLFAWLPIIFTFMLASFPAGLVIYWAWNNTLSIIQQSIIMKRQGVKIELFNNIK 599 Query: 572 STFSKNYNSQ 581 + + K + Sbjct: 600 TIWQKAPKKE 609 >gi|34580968|ref|ZP_00142448.1| 60 kD inner-membrane protein [Rickettsia sibirica 246] gi|28262353|gb|EAA25857.1| 60 kD inner-membrane protein [Rickettsia sibirica 246] Length = 560 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 234/548 (42%), Positives = 340/548 (62%), Gaps = 3/548 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + QA S R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQITVQKAENLKKQQLKALVEPATGIVVQAESQVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN +IL+P P+ L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWN-SDSEILSPEKPVHLFWVNEDGVKFLVTIAVDENYLFTIEQTIVNNSNKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 + G I R + +G I + + +K S W+G Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFAASKVDWIG 253 Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 I+DKYW S IP K +++ S F Y L G RYQ F + I PG++ + + +FAGA Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENFSIKSRIFAGA 313 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 K+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV +K Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 LL F LA K Y S MKN+QP+ID ++ + L + ++ LYK +NP+AGC P Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A+DPT IF LFG+LPF P F+ +G Sbjct: 433 ILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSASDPTTIFNLFGLLPFSPPSFLMIGA 492 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+Q Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552 Query: 553 QAVIMKMH 560 Q I K + Sbjct: 553 QYYINKFN 560 >gi|229586285|ref|YP_002844786.1| putative inner membrane protein translocase component YidC [Rickettsia africae ESF-5] gi|259515719|sp|C3PM83|OXAA_RICAE RecName: Full=Membrane protein oxaA gi|228021335|gb|ACP53043.1| Preprotein translocase subunit YidC [Rickettsia africae ESF-5] Length = 560 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 233/548 (42%), Positives = 338/548 (61%), Gaps = 3/548 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + Q S R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKAVVEPATGIVVQEESQVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN +IL+P P+ L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWN-SDSEILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 + G I R + +G I + + +K S W+G Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFVASKVDWIG 253 Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 I+DKYW S IP K +++ S F Y L G RYQ F + I PG+ + + +FAGA Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGEDFSIKSRIFAGA 313 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 K+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV +K Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 LL F LA K Y S MKN+QP+ID ++ + L + ++ LYK +NP+AGC P Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A+DPT IF LFG+LPF P F+ +G Sbjct: 433 ILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSASDPTTIFNLFGLLPFSPPLFLMIGA 492 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+Q Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552 Query: 553 QAVIMKMH 560 Q I K + Sbjct: 553 QYYINKFN 560 >gi|15891997|ref|NP_359711.1| putative inner membrane protein translocase component YidC [Rickettsia conorii str. Malish 7] gi|38503126|sp|Q92JJ3|OXAA_RICCN RecName: Full=Inner membrane protein oxaA gi|15619112|gb|AAL02612.1| 60 kD inner-membrane protein [Rickettsia conorii str. Malish 7] Length = 560 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 233/548 (42%), Positives = 339/548 (61%), Gaps = 3/548 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + Q S R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATGIVVQEESQVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEVGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN +IL+P P+ L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWN-SDSEILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 + G I R + +G I + + +K S W+G Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFAASKVDWIG 253 Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 I+DKYW S IP K +++ S F Y L G RYQ F + I PG++ + + +FAGA Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENFSIKSRIFAGA 313 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 K+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV +K Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 LL F LA K Y S MKN+QP+ID ++ + L + ++ LYK +NP+AGC P Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A+DPT IF LFG+LPF P F+ +G Sbjct: 433 ILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSASDPTTIFNLFGLLPFSPPSFLMIGA 492 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+Q Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552 Query: 553 QAVIMKMH 560 Q I K + Sbjct: 553 QYYINKFN 560 >gi|239946952|ref|ZP_04698705.1| inner membrane protein OxaA [Rickettsia endosymbiont of Ixodes scapularis] gi|239921228|gb|EER21252.1| inner membrane protein OxaA [Rickettsia endosymbiont of Ixodes scapularis] Length = 560 Score = 403 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 233/548 (42%), Positives = 339/548 (61%), Gaps = 3/548 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + D Q + R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATDIVVQEENQVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GSI+LKG +FDDL L+ Y D+S NSP V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSISLKGLRFDDLILKKYKQDLSKNSPEVRLFSPANTENAYFAEIGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN S +IL+P + L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWNSNS-EILSPEKSVNLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 + G I R + +G I + + +K S W+G Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFAAGKVDWIG 253 Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 I+DKYW S IP K +++ S F Y L G RYQ F + I PG++ + + +FAGA Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGAERYQVDFISPVQIIKPGENFSIKSRIFAGA 313 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 K+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV +K Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 LL F LA K Y S MKN+QP+ID ++ + L + ++ LYK +NP+AGC P Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF P F+ +G Sbjct: 433 ILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPFLPPSFLMIGA 492 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+Q Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552 Query: 553 QAVIMKMH 560 Q I K + Sbjct: 553 QYYINKFN 560 >gi|51473293|ref|YP_067050.1| putative inner membrane protein translocase component YidC [Rickettsia typhi str. Wilmington] gi|81692326|sp|Q68XS4|OXAA_RICTY RecName: Full=Inner membrane protein oxaA gi|51459605|gb|AAU03568.1| 60 kDa inner membrane protein [Rickettsia typhi str. Wilmington] Length = 558 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 238/562 (42%), Positives = 344/562 (61%), Gaps = 6/562 (1%) Query: 1 MERNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M N N AI LS+ I++ WQ F + P ++ ++ Q + A + Sbjct: 1 MNNNIINLIAAIVLSLSIIFGWQYFVIKPEQKKQQQRMAIYKSENLKKQ--KALAEHTSN 58 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 Q R+++++ SL GSI LKG +FDDL L+ Y D+S NSP V L SP+NT+NA Sbjct: 59 ITVQEAGQVQRIKIESESLTGSIALKGLRFDDLILKKYKQDLSQNSPAVRLFSPANTENA 118 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 YFAE+ VS ++++LPNSNTVWN ++L+P P+ L + N + I F TI++D++YL Sbjct: 119 YFAEIGLVSNLSSVKLPNSNTVWN-SDSEVLSPEKPVNLFWVNEDGIKFLVTITVDKNYL 177 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F I T+ NNS ++ G I R + +G I + + ++ Sbjct: 178 FTIEQTIINNSDKELPVQAYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDQ 237 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILP 298 S W+GI+DKYW S IP K +S+ + F Y L G RYQ F + I P Sbjct: 238 KSAKFALSKVDWIGIADKYWLSSLIPDKSSSYSANFNYALKQGAERYQVDFISPVQVIKP 297 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 GK+++ + +FAGAK+ + YEK I F+ ID+GWFY I KP+F M++FY VG Sbjct: 298 GKNLSIKSRIFAGAKKVDLLDEYEKSYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVG 357 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 NFG++I++ TV +KLL F LA K Y S MKN+QP+ID ++ + L + ++ L Sbjct: 358 NFGVSILIVTVIIKLLMFTLANKSYRSMKKMKNLQPEIDRIKNLYNNDKA-RLNQEIMAL 416 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP+AGC PIL+QIPVFF+IYKV+ +++EMRHAPF+GWIKDL++ DPT IF LFG Sbjct: 417 YKKSKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRHAPFYGWIKDLSSPDPTTIFNLFG 476 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 +LPF P F+ +G WPI+M+++MF+ KMSP AD QA ++ +MP++F+F SSFP GL Sbjct: 477 LLPFAPPSFLMIGAWPILMAITMFLHQKMSPELADPIQAQVMKFMPLIFLFMFSSFPVGL 536 Query: 539 IIYWSWSNVISIVQQAVIMKMH 560 +IYWSW+N++SI+QQ I K + Sbjct: 537 LIYWSWNNILSIIQQYYINKFN 558 >gi|165932637|ref|YP_001649426.1| membrane protein insertase [Rickettsia rickettsii str. Iowa] gi|189036358|sp|B0BVZ4|OXAA_RICRO RecName: Full=Inner membrane protein oxaA gi|165907724|gb|ABY72020.1| 60 kDa inner membrane protein [Rickettsia rickettsii str. Iowa] Length = 560 Score = 402 bits (1031), Expect = e-109, Method: Composition-based stats. Identities = 233/548 (42%), Positives = 337/548 (61%), Gaps = 3/548 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + Q S R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATGIVVQEESQVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GSI+LKG +FDDL L+ Y D+S NS V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSISLKGLRFDDLILKKYKQDLSKNSSEVRLFSPANTENAYFAEVGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN +IL+P P+ L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWN-SDSEILSPEKPVHLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 + G I R + +G I + + +K S W+G Sbjct: 194 LPVQSYGLINRKYIAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFAASKVDWIG 253 Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 I+DKYW S IP K +++ S F Y L G RYQ F + I PGK+ + + +FAGA Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGIERYQVDFISPVQIIKPGKNFSIKSRIFAGA 313 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 K+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV +K Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 LL F LA K Y S MKN+QP+ID ++ + L + ++ LYK +NP+AGC P Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+QIPVFF+IYKV+ +++EMR APF+GWIKDL+A DPT IF LFG+LPF P F+ +G Sbjct: 433 ILVQIPVFFSIYKVLYVTIEMRQAPFYGWIKDLSAPDPTTIFNLFGLLPFAPPSFLMIGA 492 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+Q Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552 Query: 553 QAVIMKMH 560 Q I K + Sbjct: 553 QYYINKFN 560 >gi|67458523|ref|YP_246147.1| putative inner membrane protein translocase component YidC [Rickettsia felis URRWXCal2] gi|75537010|sp|Q4UN76|OXAA_RICFE RecName: Full=Inner membrane protein oxaA gi|67004056|gb|AAY60982.1| Preprotein translocase subunit YidC [Rickettsia felis URRWXCal2] Length = 560 Score = 401 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 232/548 (42%), Positives = 339/548 (61%), Gaps = 3/548 (0%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S+ I++ WQ F V P ++ + + Q + D Q S R+++ Sbjct: 15 SLSIIFGWQYFVVKPEQKKQQQQIAVQKAENLKKQQLKALVEPATDIVVQEESGVQRIKI 74 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 ++ SL GSI+LKG +FDDL L+ Y D+S+NSP V L SP+NT+NAYFAE+ VS +++ Sbjct: 75 ESESLTGSISLKGLRFDDLILKKYKQDLSNNSPEVRLFSPANTENAYFAEIGLVSNLSSV 134 Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 +LPN++T+WN +IL+P P+ L + N + + F TI++DE+YLF I T+ NNS + Sbjct: 135 KLPNNDTIWN-SDSEILSPEKPVNLFWVNEDGVKFLVTITVDENYLFTIEQTIVNNSDKE 193 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 + G I R + +G I + + +K S W+G Sbjct: 194 LPIQSYGLINRKYTAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKKSEKFAASKVDWIG 253 Query: 254 ISDKYWASVFIPSKETSFHSQFKY-LSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 I+DKYW S IP K +++ S F Y L G RYQ F + I PG++ + + +FAGA Sbjct: 254 ITDKYWLSSLIPDKSSNYSSNFNYALKQGTERYQVDFISPVQIIKPGENFSIKSRIFAGA 313 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 K+ + YEK I F+ ID+GWFY I KP+F M++FY VGNFG++I++ TV +K Sbjct: 314 KKVDLLDKYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIK 373 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 LL F LA K Y S MKN+QP+ID ++ + L + ++ LYK +NP+AGC P Sbjct: 374 LLMFTLANKSYRSMKKMKNLQPEIDRIKNLYSDDKA-RLNQEIMALYKKEKVNPVAGCLP 432 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+QIP+FF+IYKV+ +++EMR PF+GWIKDL+A DPT IF LFG+LPF P F+ +G Sbjct: 433 ILVQIPLFFSIYKVLYVTIEMRQVPFYGWIKDLSAPDPTTIFNLFGLLPFSPPSFLMIGA 492 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 WPI+M+++MF+Q KMSP PAD QA ++ +MP++F+F SSFP GL+IYWSW+N++SI+Q Sbjct: 493 WPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQ 552 Query: 553 QAVIMKMH 560 Q I K + Sbjct: 553 QYYINKFN 560 >gi|319406774|emb|CBI80407.1| translocase precursor subunit [Bartonella sp. 1-1C] Length = 612 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 252/610 (41%), Positives = 363/610 (59%), Gaps = 30/610 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------T 42 ME N N+F+AI LS ++ AW Y+ P+ ++ + Q Sbjct: 1 MEYNRNFFIAIGLSFVVFVAWHFLYIVPQQAKLQESKITTQKLSNHNAALPTNDPYFSHN 60 Query: 43 VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + V + + + R L+ + RV +K L GSINL G +FDDL L+ Y L V Sbjct: 61 ASTDDTVPVANRPITPEVRKAELAKTNRVLIKTNELEGSINLVGGKFDDLLLKKYRLKVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKIL-TPTTPIKLVF 160 SP + LL+P+ YFAE + S++ + LP SNT W L TP+TPI LV+ Sbjct: 121 KKSPEIILLNPNGLPTTYFAEFGFTSSSLPAQALPQSNTKWQLEGDNTTLTPSTPITLVY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 N +F RT S+DEHY+F I D+++N S + S RI R P TN + Sbjct: 181 NNGQGQIFHRTFSVDEHYMFTIKDSISNESSSPVYLSSYARIARAAPPEDTNATYLLHEG 240 Query: 221 IAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + SL +KY + S+ + + W+GI+DKYWA IP ++T + Sbjct: 241 MIGIAGDSLKTEKYTALAELSPNPQNGQKSVIFPNITRGWIGITDKYWAVAVIPPQDTEY 300 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 S+F Y + YQ+ + +T+ P ++ T TN LFAGAK I+HY+ L I +F Sbjct: 301 TSRFVYFDRLNTHYQSDLQSALLTVPPHETKTITNRLFAGAKRVEIINHYQNQLKINKFS 360 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +LIDWGWF FI KPMF L+ Y NFG+AI+L TV +K+L FPLA K Y S A +K Sbjct: 361 LLIDWGWFDFITKPMFALIDILYKYTENFGVAILLITVLLKILLFPLAHKSYKSIARLKV 420 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 IQP + E++EK+ + Q+A+I+LYKT INP AGCWPIL+Q P+FFA+YKV+ I++ Sbjct: 421 IQPMMLEIKEKYADDRNK-QQQAIIELYKTKKINPFAGCWPILIQFPIFFALYKVLYITI 479 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P P Sbjct: 480 EMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYAVPTFLILGAWPLIMGITMFLQMQMNPLP 539 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D Q ++ WMP++F L+SFPAGL+IYW+W+N++SI+QQ++IMK G +I D L+ Sbjct: 540 QDPTQVVVFRWMPIIFTIMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKIEFFDNLK 599 Query: 572 STFSKNYNSQ 581 + K+ + Sbjct: 600 AIVQKDSKKE 609 >gi|302381828|ref|YP_003817651.1| membrane protein insertase, YidC/Oxa1 family [Brevundimonas subvibrioides ATCC 15264] gi|302192456|gb|ADL00028.1| membrane protein insertase, YidC/Oxa1 family [Brevundimonas subvibrioides ATCC 15264] Length = 614 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 219/613 (35%), Positives = 336/613 (54%), Gaps = 37/613 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ--------------PN 47 E N + ++ II+ +Q F + P+ E+ ++ Q P Sbjct: 4 ENTRNMVIFAVMTAIILIVYQIFVMGPQAEQRRAAQEAAAAQAQEQQAAAAGTPTAGIPA 63 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + + DR +AL R+ + P+L GS++L+G + DDL L+ Y + SP Sbjct: 64 STGATGPVTFVTDRTKALGNVARIPVSTPTLQGSMSLQGGRIDDLFLKNYRQTIDPTSPY 123 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 L P ++AYFA+ + +P +NTVW L +G LTP TP+ L + N + Sbjct: 124 EELFRPQGMEHAYFAQFGWTGPNVPGGVPGANTVWRLTAGSTLTPATPVTLTWDNGQGLR 183 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGD 226 F R +S+D+ Y+F + DTV N I +P GR+ R P T + EG I Sbjct: 184 FTRVLSVDDRYMFTVTDTVANLGTAPITIAPYGRVERQGVPPALGKTQILHEGGIGTFSK 243 Query: 227 KS---LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG-H 282 + KY D K + WLGI+DKYW + IP ++ + ++F+ + Sbjct: 244 GDGYVTSQLKYGDWAKKPRQEHESTGGWLGITDKYWMAALIPPQDEAIQAEFRVTDAATY 303 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 ++A+ TI PG+ +T LFAGAK + YEK +PRF IDWG+ +F+ Sbjct: 304 DIHEARMLGAARTIQPGRQVTEVQHLFAGAKRNEILADYEKQFDLPRFIYAIDWGFLFFL 363 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 +P+F+L+ +FY LVGNFG+AI+L T+ +KL+ FPLA K Y S + M+ +QP +++++E+ Sbjct: 364 TRPIFLLVEFFYGLVGNFGVAILLLTLTIKLIMFPLANKSYESLSKMRKLQPLMEKIKEQ 423 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 K PQ QKA ++LY+ INPLAGC PIL+QIPVF+A+YKV+ +++EMRHAPF+GWI Sbjct: 424 NKD-DPQAQQKATMELYQKEKINPLAGCLPILVQIPVFYALYKVLYVTIEMRHAPFFGWI 482 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVG----------------IWPIIMSLSMFIQMK 506 +DL+A DPTNI+TLFG++P+ +G + I+ +M++Q Sbjct: 483 RDLSAPDPTNIWTLFGLIPWDPSSAPLIGGLIGVHTGGGFTLALSVLAILYGFTMWLQQA 542 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 M+PP D Q I +MP++F F ++SFPAGL++YW+W+N++SI QQ IM GAE + Sbjct: 543 MNPPAPDPVQRQIFAFMPIIFTFIMASFPAGLLVYWAWNNILSIAQQYFIMHRFGAENPI 602 Query: 567 IDRLRSTFSKNYN 579 D + K Sbjct: 603 DDFI-GKLKKAPA 614 >gi|319403768|emb|CBI77352.1| translocase precursor subunit [Bartonella rochalimae ATCC BAA-1498] Length = 612 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 252/610 (41%), Positives = 363/610 (59%), Gaps = 30/610 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------T 42 ME N N+F+AI LS ++ AW Y+ P+ ++ + Q Sbjct: 1 MEYNRNFFIAIGLSFVVFVAWHFLYIVPQQAKLQESKITTQKLSNHNAALPTNDPYFSHN 60 Query: 43 VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + V + + + R L+ + RV +K L GSINL G +FDDL L+ Y L V Sbjct: 61 ASTNDTVPVANRPITPEIRKAELAKTNRVLIKTNELEGSINLVGGKFDDLLLKKYRLKVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKIL-TPTTPIKLVF 160 SP + LL+P+ YFAE + S++ + LP SNT W L TP+TPI LV+ Sbjct: 121 KKSPEIILLNPNGLPTTYFAEFGFTSSSLPAQALPQSNTKWQLEGDNTTLTPSTPITLVY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 N +F RT S+DEHY+F I D+++N S + S RI R P TN + Sbjct: 181 NNGQGQIFHRTFSVDEHYMFTIKDSISNESNSPVYLSSYARIARAAPPEDTNATYLLHEG 240 Query: 221 IAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + SL +KY + S+ + + W+GI+DKYWA IP ++T + Sbjct: 241 MIGIAGDSLKTEKYTALAELSPNPQNGQKSVIFPNITRGWIGITDKYWAVAVIPPQDTEY 300 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 S+F Y + YQ+ + +T+ P ++ T TN LFAGAK I+HY+ L I +F Sbjct: 301 TSRFVYFDRLNTHYQSDLQSALLTVPPHETKTITNRLFAGAKRVEIINHYQNQLKINKFS 360 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +LIDWGWF FI KPMF L+ Y NFG+AI+L TV +K+L FPLA K Y S A +K Sbjct: 361 LLIDWGWFDFITKPMFALIDILYKYTENFGVAILLITVLLKILLFPLAHKSYKSIARLKL 420 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 IQP + E++EK+ + Q+A+I+LYKT INP AGCWPIL+Q P+FFA+YKV+ I++ Sbjct: 421 IQPMMLEIKEKYADDRNK-QQQAIIELYKTKKINPFAGCWPILIQFPIFFALYKVLYITI 479 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P P Sbjct: 480 EMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYAVPTFLILGAWPLIMGITMFLQMQMNPLP 539 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D Q ++ WMP++F L+SFPAGL+IYW+W+N++SI+QQ++IMK G +I D L+ Sbjct: 540 QDPTQVIVFRWMPIIFTIMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKIEFFDNLK 599 Query: 572 STFSKNYNSQ 581 + K+ + Sbjct: 600 AIVQKDSKKE 609 >gi|295690947|ref|YP_003594640.1| membrane protein insertase [Caulobacter segnis ATCC 21756] gi|295432850|gb|ADG12022.1| membrane protein insertase, YidC/Oxa1 family [Caulobacter segnis ATCC 21756] Length = 618 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 214/614 (34%), Positives = 324/614 (52%), Gaps = 40/614 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-------RKNIQTVKQPNQVDNSYA 54 N N + I + I+ +Q F + P+ ++ E ++ N Sbjct: 3 NDNKNTLMFIVSAFAILIGYQFFILGPQQKKAEAEMRAKKAAQQQTAAQAGVPLDANGNP 62 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 A L R QA + SPR+ + P+L GSI LKG + DDL LR Y + NSP V L P Sbjct: 63 APLRLSRDQAKAQSPRIVVDTPALSGSIALKGGRIDDLFLRKYAETTAKNSPPVELFRPE 122 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 ++A+FA+ + AN LP+S TVW G++L P +P+ L + N + F R I++ Sbjct: 123 GAEHAWFADFGWAG-ANLPGLPDSRTVWTAAPGQVLRPNSPVTLTYDNGMGLTFTRVIAV 181 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGDKSLVEQ- 232 D+ +F + D+V NN + +P + R V EG I VLG + Sbjct: 182 DDQAMFSVTDSVKNNGTAAFQLAPYATVQRQGITDHLGKTQIVHEGAIGVLGSGKDQKLE 241 Query: 233 --KYSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAK 288 KY +K +S W GI+DKYW + IP + + +Q++ + G Y Sbjct: 242 LAKYQKWKKDKPLTTFDSVGGWAGITDKYWLAALIPGQTEAIKAQYRVTNVAGVDVYDVN 301 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA---------------IPRFEML 333 F + PG ++T T LFAGAK P + Y+ A IPRF+ Sbjct: 302 FVGPTQALNPGATLTQTTRLFAGAKTVPLLRKYQYGGAKPPAWWEFWSNAKAEIPRFDWA 361 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +DWG F +P+F ++ FY +VGNFG+AI+ TV +KL+ +P+A K Y S A MK I Sbjct: 362 VDWGMFSMFTRPIFNVLEIFYKMVGNFGLAILALTVLLKLILYPMADKSYESMAKMKKIA 421 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++++L+ K K P + Q+ M+ LY+ INP+ GC P+L+QIPVF+A+YKV+++++EM Sbjct: 422 PEVEKLKAKHKDDPAK-QQQEMMALYQKEKINPMMGCLPMLIQIPVFYALYKVLTVTIEM 480 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF----------MHVGIWPIIMSLSMFI 503 RHAPF+GWI+DL+A DP+ IF LFG +P+ +H+G+WP++ +M++ Sbjct: 481 RHAPFFGWIQDLSARDPSTIFNLFGAIPWDPATAPLIGGFLGGPLHIGVWPLLYGFTMWL 540 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M+PP D Q I P++F F LS F GL+IYW WSNV++IVQQ V+M+ + E Sbjct: 541 TTAMNPPAGDPIQQKIFQLFPIIFTFTLSQFAVGLVIYWCWSNVLTIVQQYVMMRRYKVE 600 Query: 564 IGLIDRLRSTFSKN 577 + + K Sbjct: 601 NPIDRIIARLQGKA 614 >gi|209542536|ref|YP_002274765.1| 60 kDa inner membrane insertion protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530213|gb|ACI50150.1| 60 kDa inner membrane insertion protein [Gluconacetobacter diazotrophicus PAl 5] Length = 589 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 193/590 (32%), Positives = 311/590 (52%), Gaps = 15/590 (2%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + VA LS +++ ++ F E+ + P + A V Sbjct: 1 MDTKRFIVATLLSAMVLVGFEYFMPKQAHHEVAQQAAQTSRQTPPTDAARAPAPVAGASS 60 Query: 62 AQALSMSP----RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + +P R+ + P + GSI+L GA+ DD+ LR YH V+ SP V +L P + + Sbjct: 61 QPVSTPAPQAETRLAIDAPKVAGSIDLLGARLDDMVLRDYHETVAKGSPQVRILEPGHDQ 120 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 + E+ +++ T LT P+ L + N + F+ +S+D H Sbjct: 121 QPNYVEIGWMNLPGGQVRVPDATTVWSADAPKLTSDRPVTLSWDNGAGVTFQIVVSIDAH 180 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI----AVLGDKSLVEQK 233 Y+F I + N S + P R+ R T T + V EG I L + S + Sbjct: 181 YMFGIEQRIVNRSAQPVSLYPYARVDRAYTPTETGGYLVHEGPISVIDGRLDESSYKSLR 240 Query: 234 YSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYL-SDGHARYQAKFSA 291 ++S W GI+DKYW + IP + T+ + Y + G YQ F A Sbjct: 241 TGATPPGNLSWTKGGQGGWAGITDKYWLTAVIPQQGTAVTGSYGYQANGGAGVYQVGFIA 300 Query: 292 NEITI-LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 T+ PG + T + +FAGAKE + Y+ L IP F +D+GWF F+ +P+F ++ Sbjct: 301 QAATVVAPGTTGATVSHVFAGAKEVNLLEQYQSSLHIPDFWKAVDFGWFAFLTRPIFYVL 360 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + L+GNFG+A+M T+ VK LFFPLA +Q+ S A M+ +QPK+ ELRE++ +S Sbjct: 361 DWLNTLLGNFGLALMAFTLLVKALFFPLATRQFRSMAKMRQLQPKVQELRERY-KSDQMA 419 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 L + M+ LYK +NP AGC P+++QIPVF+++YK + I++EMRHAPF+GWI DL+A D Sbjct: 420 LNQNMMALYKAEGVNPAAGCLPMVVQIPVFWSLYKDLYITIEMRHAPFFGWIHDLSAPDL 479 Query: 471 TNIFTLFGILPFYLPG---FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 TN+F LFG++P+ ++ +G+WPI+ +MF+Q K++P P D Q + MPV+F Sbjct: 480 TNLFNLFGLIPWDPNVLSPYLQLGVWPILFGATMFLQQKLNPAPTDPAQQRMFQMMPVLF 539 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 F ++ PAGL+IY+ W+N++++ QQ VI + + + + + + + Sbjct: 540 TFFMARQPAGLVIYYCWNNLLTVAQQMVIQRRMKSAVDKVGAIPAAAGRK 589 >gi|296115059|ref|ZP_06833701.1| 60 kDa inner membrane insertion protein [Gluconacetobacter hansenii ATCC 23769] gi|295978396|gb|EFG85132.1| 60 kDa inner membrane insertion protein [Gluconacetobacter hansenii ATCC 23769] Length = 719 Score = 397 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 203/588 (34%), Positives = 306/588 (52%), Gaps = 19/588 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ VA+A+S +++ +Q +P + D Sbjct: 1 MDI-KRLMVAVAMSAMVLLGFQYLVPHPDHKAATQPALGAGQDTPAAAPGADAGNGATDA 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + PR+ + + GSINL+GA+ DDL L+ YH V SP+V +L P + Sbjct: 60 KDD-----PRLAINTGRVGGSINLRGARLDDLVLKDYHETVKPGSPLVRILDPRQDPQSN 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E+ +++ A T LT P+ L + N +FE +++D++Y+F Sbjct: 115 LVEVGWLNIAGGQVRVPDATTVWSADQASLTQDQPVTLRWDNGQGQVFELVVAIDQNYMF 174 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI----AVLGDKSLVEQKYSD 236 + V N + + P R+ R T + V EG I L + S + Sbjct: 175 SVTQKVHNQAAGPVSLYPYSRVDRAYTPVETGGYLVHEGPISVIDGRLDESSYKSVRNGT 234 Query: 237 IEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG--HARYQAKFSA-N 292 I + S + W GI+DKYW + IP +++ + Y+ + YQ F+A Sbjct: 235 IPPGNTSWNKPGTGGWSGITDKYWLTAVIPQQDSLVTGSYGYVPEAGHEGVYQVGFTART 294 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 I PG T +FAGAKE P + YE L IP F +D+GWF F+ P+F ++ + Sbjct: 295 PEVIAPGGDGVTETHVFAGAKEVPLLEKYEASLHIPSFWKAVDFGWFAFLTHPIFTVLDW 354 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 L+GNFG+A+M T+ VK LFFPLA KQ+ S M+ +QPKI LRE++K L Sbjct: 355 LNTLLGNFGLALMAFTLVVKGLFFPLATKQFRSMGKMRQLQPKIKALRERYKD-DQMALN 413 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + MI LYK +NP +GC P+LLQIPVF+ +YKV+ +++EMRHAPF+GWI DL+AADPTN Sbjct: 414 QHMIALYKEEKVNPASGCLPMLLQIPVFWCLYKVLFVTIEMRHAPFFGWIHDLSAADPTN 473 Query: 473 IFTLFGILPFYL---PGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 IFTLFG++P+ F +G+WPI L+MF Q K++P P AD Q + MP++F Sbjct: 474 IFTLFGLIPWDPTHISTFFQLGLWPIAFGLTMFAQQKINPAPAADPAQQKMFQLMPILFT 533 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 F ++ P+GL+IY+ W+N++++ QQAVI + AE +R K Sbjct: 534 FFMARQPSGLVIYYCWNNLLTMAQQAVIQRRVNAEAKAPVVIRPEKEK 581 >gi|148261132|ref|YP_001235259.1| 60 kDa inner membrane insertion protein [Acidiphilium cryptum JF-5] gi|326404533|ref|YP_004284615.1| inner membrane protein OxaA [Acidiphilium multivorum AIU301] gi|166975846|sp|A5G0F8|OXAA_ACICJ RecName: Full=Inner membrane protein oxaA gi|146402813|gb|ABQ31340.1| protein translocase subunit yidC [Acidiphilium cryptum JF-5] gi|325051395|dbj|BAJ81733.1| inner membrane protein OxaA [Acidiphilium multivorum AIU301] Length = 601 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 200/601 (33%), Positives = 303/601 (50%), Gaps = 30/601 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY-----------PRIEEMNNERKNIQTVKQPNQVD 50 N +I++S++I+ +Q Y P + + + Q Sbjct: 1 MDNRRLLYSISISLVILVLFQVIASYVLPPPKKAPPHPATQTAQTQPVSGQPAPGVPAPS 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 A A + PR+ + P L GS++L GA+ DDL L YH V SP+V L Sbjct: 61 AVPPAAAPGGVAAKIPAGPRLAISTPLLRGSMSLVGARLDDLVLTRYHQTVKKTSPLVQL 120 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 LS + T +Y+ + + + + SG L+P P+ L + N + FE Sbjct: 121 LSQAGTAKSYYVQFGWDAAPGSSLKVPGPDTVWTSSGGDLSPAHPVTLSWNNGAGVTFEL 180 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 +++D YLF + V N+ + P RI R +F + +G I V Sbjct: 181 KLAVDRQYLFTVQQRVINHGAAAVEVYPWSRIRRDFLPEEPGSFTLHKGPIGVFHGTLHE 240 Query: 231 ----------EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + + W GI+ KYW + IPS+ ++YL+D Sbjct: 241 MGYEGVKSGGKHPAAGDAPGTAYQTTNLGGWAGITGKYWLTALIPSQGREVIGAYRYLAD 300 Query: 281 GHARYQAKF-----SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + +A + PG + +TT +FAGAK + HYE IP FE ID Sbjct: 301 PGQPEHGGYQVDYMTAKPVDAAPGATASTTTHVFAGAKVLSILSHYETQYRIPLFERAID 360 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GWF+F+ KP+F+ + Y + GN G+AI++ T+ +KL+ FPL + Y S A M+ I PK Sbjct: 361 FGWFFFLTKPIFIALDYLAGVFGNMGVAIIVFTIGLKLVLFPLVRTSYRSMARMRAITPK 420 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + LRE++K Q QK ++ LYK +NP AGC P+L QIP+FF++YKVI IS+ MRH Sbjct: 421 VQALRERYKDDQMQ-QQKEIMALYKAEGVNPAAGCLPMLPQIPIFFSLYKVIFISIGMRH 479 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPG---FMHVGIWPIIMSLSMFIQMKMSPPPA 512 APF WI DL+A DPTNIF LFG+LPF+ F+H+GI PIIM ++M+ Q +++PPP Sbjct: 480 APFVLWIHDLSAEDPTNIFNLFGLLPFHPSALSPFLHLGILPIIMGITMWGQQRLNPPPP 539 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 D QA ++ +MPV+F F L F AGL++Y+ +N ++I+QQ IM+ A L + Sbjct: 540 DPTQAKMMQFMPVIFTFMLGRFAAGLVLYYCVNNTLTILQQWTIMRGTNAAPRAAANLNA 599 Query: 573 T 573 Sbjct: 600 K 600 >gi|296283114|ref|ZP_06861112.1| putative inner membrane protein translocase component YidC [Citromicrobium bathyomarinum JL354] Length = 585 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 201/589 (34%), Positives = 319/589 (54%), Gaps = 15/589 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----NFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N +A+ L I++ ++ +Y P E + + + N A Sbjct: 1 MDNQRNLILAVVLCGILILGYEAAVTYYYPTPPETEQVDRATTAEQRVTQDTAQNPAIAA 60 Query: 57 LIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 D A +ALS RV + P + GSINL GA+ DD+ L+ + V +S V L + Sbjct: 61 AAIDEAVDLDEALSAGNRVAIDAPRVEGSINLVGAKIDDIELKDHRATVDKDSGPVQLFA 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 P+ T FA+ +V ++P ++TVW SG+ LTP TPI L + NA F + Sbjct: 121 PAGTPIQNFAQFGFV--GEGTQVPGADTVWQ-ASGEALTPDTPIDLRWDNAQGQRFRIRL 177 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 S+D++Y+ TV N + SP I R + +T+ G I G Sbjct: 178 SIDDNYMITAEQTVANTGDAPVVVSPFATITRTSLTASKSTWISHSGPIGTFGGTVDYGP 237 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 Y D+ + + + +WLG +D YW IP ++ + F+ L G ++A N Sbjct: 238 DYDDVVEQKVVSGAADPAWLGFTDIYWLGALIPEAGSAPDTGFRSL--GDNLFRADLIYN 295 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 T+ PG+ IT T+ LFAGAKE + Y +D I +F + IDWGWF + KP+ L+ Sbjct: 296 PATLQPGRQITRTSRLFAGAKESGVLDAY-QDAGIAQFGLAIDWGWFRWFEKPILWLLLQ 354 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +++VGNFG+AI+L T V+ L FP+A+K + S A+MK IQP++ +L+EK K Q Sbjct: 355 IFSVVGNFGVAIILLTCIVRGLMFPIAQKGFSSMASMKAIQPEMKKLQEKHKDDKVT-QQ 413 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M +L+K +NP+AGC P+LLQIPVFFA+YKV+ +++EMRH PF WI+DL+A DP + Sbjct: 414 QEMQKLFKERGVNPVAGCLPMLLQIPVFFALYKVLILAIEMRHQPFIFWIRDLSAPDPAH 473 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I LFG+LPF +PG + +G +++ +M++ +++P D Q + + MP V +F +S Sbjct: 474 ILNLFGMLPFEVPGMLALGPLALLLGFTMWLTFRLNPAAMDPVQQQVFSIMPWVMMFVMS 533 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 F AGL++YW+ SN++++ QQ + H ++ R+ + S+ Sbjct: 534 PFAAGLLLYWNTSNILTLAQQKYLYSKHPQLREAAEKERAEKAAKAQSE 582 >gi|167644608|ref|YP_001682271.1| putative inner membrane protein translocase component YidC [Caulobacter sp. K31] gi|254772764|sp|B0T872|OXAA_CAUSK RecName: Full=Inner membrane protein oxaA gi|167347038|gb|ABZ69773.1| 60 kDa inner membrane insertion protein [Caulobacter sp. K31] Length = 630 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 204/627 (32%), Positives = 317/627 (50%), Gaps = 49/627 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-----RKNIQTVKQPNQV--DNSYA 54 + N N + + + I+ +Q + P+ ++ E Q QP + Sbjct: 4 DSNKNTLMFLVCAFAILIGYQFLVMGPQQKQREAELRAKKAAEAQVAVQPGMTIGADGTP 63 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 L R +A + SPR+ + P+L GSI LKGA+ DDL L+ Y NSP V L P Sbjct: 64 QPLKLSRDEAKAQSPRIAVDTPALSGSIALKGARIDDLWLKRYTQTADKNSPPVELFRPE 123 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 ++A+FA+ + A LP TVW G++L PTTP+ L + N ++F RTIS+ Sbjct: 124 GAEHAWFADFGWAGIAGMTGLPTPQTVWTAAPGQVLRPTTPVVLTYDNGQGLVFTRTISV 183 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL----- 229 D +F + DTV N + +P + R T + + G L Sbjct: 184 DADAMFTVADTVRNQGGAAVALAPYASVQRQGIPTEGPHGLGKTQIVYEGGIGVLGGIDG 243 Query: 230 ---------VEQKYSDIEKSS--ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + KY +K N W+G++DKYW + +P + +F+ Sbjct: 244 VEGGKYILQNKAKYPKWKKDKPLQDNLQSKGGWIGMTDKYWLAALVPQQSEMIKGRFQVK 303 Query: 279 S-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA----------- 326 G Y++ F+ ++ G ++T T LFAGAK P + Y+ Sbjct: 304 PVSGVDVYESAFTGAPKSLAAGATVTNTTRLFAGAKTVPLLTRYQYGGKPVVWWEFWNRP 363 Query: 327 ---IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 IP F+ +DWG F I +P+F ++ FY +VGNFG+AIML TV +KL+ FPLA K Y Sbjct: 364 ANVIPNFDKAVDWGMFEVITRPIFNVLEIFYKMVGNFGVAIMLLTVALKLILFPLADKSY 423 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S A MK I P++++L+ K K P + Q+ M+ LY INP+ GC P+L+QIP+F+++ Sbjct: 424 ESMAKMKKIAPEVEKLKVKNKDDPAK-QQQEMMALYAKEKINPMMGCVPMLIQIPIFYSL 482 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF----------MHVGIW 493 YKV+++++EMRHAPF+GWI DL+A DP+ LFG++ + +H+G+W Sbjct: 483 YKVLTVTIEMRHAPFFGWITDLSARDPSTFMNLFGLIHWDPATAPLIGAFLSGPLHIGVW 542 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P++ +M++ M+PP D Q I + P+VF F LS F GL+IYW WSNV++I+QQ Sbjct: 543 PLLYGFTMWLTTAMNPPAGDPIQQKIFQFFPIVFTFTLSQFAVGLVIYWCWSNVLTILQQ 602 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNS 580 +IM + + + + K + Sbjct: 603 YIIMHRYKVDNPIDQLVNRLRGKTVEA 629 >gi|326386366|ref|ZP_08207989.1| putative inner membrane protein translocase component YidC [Novosphingobium nitrogenifigens DSM 19370] gi|326209027|gb|EGD59821.1| putative inner membrane protein translocase component YidC [Novosphingobium nitrogenifigens DSM 19370] Length = 606 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 192/607 (31%), Positives = 305/607 (50%), Gaps = 34/607 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----NFYV----------------YPRIEEMNNERKNI 40 ME+ N A+ L II+ W FY + + Sbjct: 1 MEKQRNLIWAVVLMGIILIGWDLGLRYFYPHAGEHPHAAASSTATSASGTAPASGDAAPA 60 Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 + ++ + A+ D AL+ RV + P + GSINL G DDL L + Sbjct: 61 KPTREGGLQSPADIAIEAQDLKTALAAPTRVAIAAPGVSGSINLVGGLIDDLTLNRHRET 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 + SP V L SP+ T ++A+L + N ++ P NTVW LTPTTP+ L + Sbjct: 121 SDAGSPPVRLFSPAGTPAQHYAQLGWTG-DNGVQTPQGNTVWQ-ADRTRLTPTTPVTLRW 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 NA F ++DE+Y+ +VTN + P I R + +T+ V G Sbjct: 179 TNATGQTFAIRYAIDENYMISAQQSVTNAGTAPVSVKPFALINRTDRTASLDTWQVHSGP 238 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 I Y D+ + +W+G +D YW S +P T F+ L + Sbjct: 239 IGAFDGSVDFASHYKDVNAAGEVAPAGQTNWIGFTDIYWLSALVPDAGTKPSGSFRALGN 298 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G ++A T+ PG++++ + LFAGAKE + Y + I F + IDWGWF Sbjct: 299 GF--FRADLIYPAATVAPGQTVSQSLRLFAGAKENRVLEAY-EAQGISNFSLAIDWGWFR 355 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + KP+F L+ ++ V NFGIAI+L T+ V+ + FP+A++Q+ S A M+ IQPK+ ++ Sbjct: 356 WFEKPIFWLLDSLFHAVKNFGIAIILLTLIVRGIMFPVAQRQFASMAAMRAIQPKMKAIQ 415 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E++K P Q+ ++ LYK +NPLAGC P+ LQIPVFFA+YKV+ +++EMRH PF Sbjct: 416 ERYKDDKP-RQQQEIMALYKEEGVNPLAGCLPMFLQIPVFFALYKVLVLTIEMRHQPFAL 474 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL++ DPT++ LFG+LPF G +G+ +++ +M++Q K+ P D Q ++ Sbjct: 475 WIHDLSSPDPTHLLNLFGLLPFTPTGMFGIGVLALLLGATMWLQFKLQPAAMDPSQQQVM 534 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG--------AEIGLIDRLRS 572 MP + +F +S+F +GL+IYW SN+++I QQ + H ++ + +++ Sbjct: 535 AIMPWMMMFVMSTFASGLLIYWITSNLLTIAQQRYLYSRHPQLKAQATKDQVDIDRQVKR 594 Query: 573 TFSKNYN 579 N Sbjct: 595 ERKPAPN 601 >gi|85709448|ref|ZP_01040513.1| putative inner membrane protein translocase component YidC [Erythrobacter sp. NAP1] gi|85688158|gb|EAQ28162.1| putative inner membrane protein translocase component YidC [Erythrobacter sp. NAP1] Length = 595 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 190/577 (32%), Positives = 296/577 (51%), Gaps = 25/577 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----NFYVYPRIEEMNNERKNIQTVKQPNQV------- 49 M+ N +A+ LS +++ +W FY + + + Sbjct: 1 MDNQRNILLAVVLSGLLILSWDMGMRYFYPQSDVPAPSEVMSGAASDPADADTVTSSTDG 60 Query: 50 -----DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + A V D AL+ RV + P + GSINL GA+ DDL L+ Y Sbjct: 61 PAGDLGEAAAEVGPVDLGTALASENRVIIDAPRVAGSINLVGARVDDLVLKDYDETTQEG 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 S V +L+P T ++AE +V + G+ LTP TP+ L + N Sbjct: 121 SDPVRILAPDRTDEQHYAEFGFVVGGQRMSSRAIWE----ADGERLTPETPVTLSRTDEN 176 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 I + S+D++Y+ TV N S + P I R + + F G V Sbjct: 177 GITYRVAFSIDDNYMVSAQQTVENGSENAAIVQPFALIKRTSETASPDQFIAHAGPTGVF 236 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 G Y ++ + N + SWLG +D YWAS IP + + + ++ L G Sbjct: 237 GGSLYDPNSYEELAELGRDNPAGAVSWLGFTDNYWASALIPGEGEADSAGWRSL--GDQL 294 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 ++A + T+ G S+T LFAGAKE + Y +D I F I WGWF + K Sbjct: 295 FRADLIYDAQTVPAGGSLTRGTQLFAGAKESAILDQY-EDAGITYFGKAISWGWFEWFEK 353 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+ L+ LVGNFG+AI+L TV ++ L FP+A+KQ+ S A MK +QPK+ ++E++K Sbjct: 354 PLLWLLRTLNGLVGNFGVAIILLTVIIRGLLFPIAQKQFASMAQMKAVQPKMKAIQERYK 413 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q Q+ +++LYK +NPLAGC P+L+QIP+FFA+YKV+ +++EMRH P + ++ D Sbjct: 414 DDK-QTQQQKIMELYKEEKVNPLAGCLPLLIQIPIFFALYKVLYLAIEMRHEP-FLYMSD 471 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DP I LFG+LP+ +PGF+ +GI +++ ++M++ K++P D Q I N MP Sbjct: 472 LSAPDPAKILNLFGLLPYDVPGFLGIGILAVLLGVTMWLTFKLNPSAMDPVQQQIFNLMP 531 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +F ++ F AGL+IYW SNV+++ QQ+ + H Sbjct: 532 WFLMFVMAPFAAGLLIYWVTSNVLTLAQQSYLYSRHP 568 >gi|87198602|ref|YP_495859.1| putative inner membrane protein translocase component YidC [Novosphingobium aromaticivorans DSM 12444] gi|87134283|gb|ABD25025.1| protein translocase subunit yidC [Novosphingobium aromaticivorans DSM 12444] Length = 600 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 193/575 (33%), Positives = 305/575 (53%), Gaps = 21/575 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----NFYVYPRIEEMNNERKNIQTVKQPNQV------- 49 M+ N +A+ L+ I++ W FY P + + + Sbjct: 1 MQNQRNLIMAVVLTGILLLGWDVAMRWFYPQPAQKPKVEAAASAEPANGEKPKRTREGGL 60 Query: 50 -DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 + A+ D AQ L+ R+ + P L GSINLKGA DD+ L + V NS V Sbjct: 61 QNAGDIALEKKDLAQELAAGHRIAIDAPGLKGSINLKGALVDDVTLARHREGVDRNSAPV 120 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L SP+ T +FA++ +V + P++NT+W G LTP TP+ L + NA+ + Sbjct: 121 RLFSPAGTPAQHFAQIGWV--GEGVAAPDANTMWQ-ADGAKLTPQTPVTLRWTNASGQTY 177 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 ++D Y+ V N + P + R + +T+ V G I Sbjct: 178 SIRYAIDGDYMITATQGVANTGPAPVVVRPFALVNRTDKTASLDTWNVHSGPIGAFDGSV 237 Query: 229 LVEQKYSDIEKSS--ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + YS + ++ F + +W+G +D YW S IP + F+ L G Y+ Sbjct: 238 NFDNNYSTVAEAEGGAIPFKGTANWIGFTDIYWLSALIPDANAKAEAAFRSL--GQGVYR 295 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 A ++I PGK+++ T LFAG KE + Y + + F + IDWGWF + KP+ Sbjct: 296 ADLIYPSVSIAPGKALSQTVRLFAGGKENAVLEKY-EAAGVTNFSLSIDWGWFRWFEKPI 354 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + VGNFG+AI+L T+ V+ + FP+A++Q+ S A M+ +QPK+ ++E++K Sbjct: 355 FWLLDSIFKKVGNFGVAIILLTLIVRGVMFPIAQRQFASMAAMRALQPKMKAIQERYKDD 414 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q Q+ +++LYK +NPLAGC PI LQIPVFFA+YKV+ +++EMRH PF WIKDL+ Sbjct: 415 K-QKQQQEIMELYKREKVNPLAGCLPIFLQIPVFFALYKVLVLTIEMRHQPFALWIKDLS 473 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 A DP ++ LFG+LPF P F+ +G+ I++ ++M++Q K+ P D Q + +MP + Sbjct: 474 APDPLHVLNLFGLLPFDPPSFLGIGVLAILLGITMWLQFKLQPAAMDPAQQQVFAFMPWI 533 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +F ++ F AGL+IYW SN+++I QQ + H Sbjct: 534 MMFVMAPFAAGLLIYWITSNLLTIAQQKYLYSRHP 568 >gi|319405206|emb|CBI78811.1| translocase precursor subunit [Bartonella sp. AR 15-3] Length = 612 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 253/610 (41%), Positives = 361/610 (59%), Gaps = 30/610 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------------------T 42 ME N N+F+AI LS ++ AW YV P+ ++ + Q Sbjct: 1 MEYNRNFFIAIGLSFVVFVAWHFLYVIPQQAKLQESKIIAQKLSNHNAALPTNDMHFSNN 60 Query: 43 VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + V + + + R L+ + R+ +K L GSINL G +FDDL L+ Y L V Sbjct: 61 ALTDDTVPVTNRPITPEMRKAELAKTDRILIKTNELEGSINLVGGKFDDLLLKKYRLKVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKIL-TPTTPIKLVF 160 SP + LL+PS AYFAE + S++ + LP SNT W L + TP+TPI LV+ Sbjct: 121 KKSPEIILLNPSGLPTAYFAEFGFTSSSLPAKALPQSNTKWQLEGYNTILTPSTPITLVY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 N +F RT S+D+HY+F I D+++N S I S R+ R P TN + Sbjct: 181 NNGQGQIFHRTFSVDDHYMFTIKDSISNESSSPIYISSYARVARTAPPEDTNATYLLHEG 240 Query: 221 IAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + SL +KY + SI + + W+GI+DKYWA IP ++ + Sbjct: 241 MIGIAGNSLKTEKYTALAELSPNPQNGQKSIIFPNITGGWIGITDKYWAVAVIPPQDKEY 300 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 S+F Y + YQ+ + +T+ P ++ T N FAGAK I+HY+ L I +F Sbjct: 301 TSRFVYFDRLNTHYQSDLQSALLTVSPHETKTIINRFFAGAKRVEIINHYQNQLKINKFS 360 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +LIDWGWF FI KPMF L+ Y NFGIAI+L TV +K+L FPLA K Y S A +K Sbjct: 361 LLIDWGWFDFITKPMFTLIDILYKYTENFGIAILLITVLLKILLFPLAHKSYKSMARIKL 420 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 IQP + E++EK+ + Q+A+I+LYKT INP AGCWPIL+Q P+FFA+YKV+ I++ Sbjct: 421 IQPMMLEIKEKYANDRNK-QQQAIIELYKTKKINPFAGCWPILVQFPIFFALYKVLYITI 479 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 EMRHAPF+GWI+DLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P P Sbjct: 480 EMRHAPFFGWIQDLAAPDPTSIFNLFGLLPYAVPTFLILGAWPLIMGITMFLQMQMNPLP 539 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D Q ++ WMPV+F L+SFPAGL+IYW+W+N++SI+QQ++IMK G +I D L+ Sbjct: 540 QDPTQVIVFRWMPVIFTVMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKIEFFDNLK 599 Query: 572 STFSKNYNSQ 581 + K + Sbjct: 600 AIVQKKSKKE 609 >gi|149186358|ref|ZP_01864671.1| putative inner membrane protein translocase component YidC [Erythrobacter sp. SD-21] gi|148829947|gb|EDL48385.1| putative inner membrane protein translocase component YidC [Erythrobacter sp. SD-21] Length = 579 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 185/566 (32%), Positives = 299/566 (52%), Gaps = 14/566 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVDN-SYAA 55 ME + N+ + + LS+ ++ WQ FY P + E + +A Sbjct: 1 MENSRNFVLVLTLSLAVLIGWQWAMDHFYPQPDNVPVTAETVDTPAEAAAAASGEIGESA 60 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 D +L + R+ + +P + GSI + GA DD+ L+ Y +S V + +P Sbjct: 61 ATSVDLESSLGAAERIRIDSPKVAGSIAVGGAMIDDIVLKDYAASPDGDSEPVRIFAPRG 120 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 T +A+ ++ I G L+ P+ L N +L E+T S+D Sbjct: 121 TDVQQYAQFGFLVNGAKISDDVLWE----SDGDTLSVGNPVTLRHDAGNGVLLEQTYSID 176 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 E+Y+ + V+N + I P G + R + + F G I G YS Sbjct: 177 ENYMITVEQAVSNRGENGIVAQPFGLVGRTSTTMSDDFFIAHSGPIGSFGQAVEYGYDYS 236 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D+E+ + + WLG +D YW + +P T + F+ L G Y+A + + Sbjct: 237 DVEEERKVSPSGTTDWLGFTDIYWLAALVPQAGTDPDATFRSL--GGDLYRADMIYDPVR 294 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G+ +TTT+ LFAGAK+ + Y +D IP+F + IDWGWF + KP L+ + Sbjct: 295 VEAGRKVTTTSRLFAGAKDSEILDAY-QDAGIPQFGLAIDWGWFRWFEKPFLWLLKNIFA 353 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 LVGNFG+AI++ T+ V+ L FP+A+KQ+ S A MK IQPK+ +L+E+ K + Q+ M Sbjct: 354 LVGNFGVAIIILTIIVRGLMFPIAQKQFASMAAMKAIQPKMKKLQERHKDDKVK-QQQEM 412 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +L+K +NPLAGC P++LQIP+FFA+YKV+ +++EMRH + WI+DL+A DP I Sbjct: 413 QKLFKEEQVNPLAGCLPLILQIPIFFALYKVLYLAIEMRHQ-NFLWIEDLSAPDPATILN 471 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+LPF P F+ +GI +++ ++M++ K++P D Q + + MP V +F ++ F Sbjct: 472 LFGLLPFTPPSFLAIGILAVLLGVTMWLTFKLNPSAMDPVQQQVFSIMPWVLMFIMAPFA 531 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHG 561 AGL++YW SNV+++ QQ + H Sbjct: 532 AGLLLYWVTSNVLTLAQQKYLYSKHP 557 >gi|296535613|ref|ZP_06897793.1| inner membrane protein OxaA [Roseomonas cervicalis ATCC 49957] gi|296264068|gb|EFH10513.1| inner membrane protein OxaA [Roseomonas cervicalis ATCC 49957] Length = 524 Score = 390 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 198/499 (39%), Positives = 300/499 (60%), Gaps = 12/499 (2%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 R+ +++P + GS+ L+GA+ DDL L+ Y +++SP+V + +P YFA+ + S Sbjct: 8 QRLRVESPRVSGSLLLRGARLDDLVLKDYRETTAASSPLVRMFAPREELQPYFAQWGWSS 67 Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN 188 +P++ T W SG L P +P+ L ++N F+ +SLD +Y+F+ V N Sbjct: 68 ADGRTRVPDNETDWT-ASGGPLGPDSPVTLSWENGQGQTFQIVLSLDRNYMFQAEQRVIN 126 Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS----- 243 ++ D + P R+ R + + + EGF+ VL L E Y + Sbjct: 127 SAADPVLVLPWSRVRRERTPHVAGFYILHEGFVGVLN-GRLNELTYKSAKDDGARTRGVA 185 Query: 244 -NFHESNSWLGISDKYWASVFIP-SKETSFHSQFKYL-SDGHARYQAKFSAN-EITILPG 299 S W G +DKYW + P + ++++ +G R+Q F+ T+ G Sbjct: 186 LEQETSGGWAGFTDKYWLAAIAPVDAAQPLRAAWRHVAENGEDRWQVDFATPQPQTVASG 245 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + + LFAGAKE + Y +L I F+ ID+GWFYF+ KP F + Y + L GN Sbjct: 246 ATGSIATRLFAGAKEVHLLDAYRDNLGITDFDKAIDFGWFYFLTKPFFYALDYLFKLFGN 305 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 FGIAI++ TV +KL FFPLA K Y S A MK + PK+ E+RE++K P + M+ LY Sbjct: 306 FGIAILVFTVALKLAFFPLANKAYKSMARMKVLTPKMQEIRERYKDDPAKAQS-EMMALY 364 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 ++ +NP +GC PIL+QIPVFFA+YKV+ +++EMRHAPF+GWI+DL+A DPTN+F LFG+ Sbjct: 365 RSEKVNPASGCLPILIQIPVFFALYKVLFVTIEMRHAPFFGWIRDLSAPDPTNLFNLFGL 424 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 +P+ P +H+ +W IIM ++MF+Q K++P PAD QA I WMP++F F L+SFPAGL+ Sbjct: 425 IPWDPPALLHMPVWAIIMGVTMFVQQKLNPAPADPIQAKIFTWMPIIFTFMLASFPAGLV 484 Query: 540 IYWSWSNVISIVQQAVIMK 558 IYWSW+N++S+ QQ IM+ Sbjct: 485 IYWSWNNLLSVAQQWYIMR 503 >gi|319898441|ref|YP_004158534.1| translocase precursor subunit [Bartonella clarridgeiae 73] gi|319402405|emb|CBI75946.1| translocase precursor subunit [Bartonella clarridgeiae 73] Length = 612 Score = 389 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 248/610 (40%), Positives = 361/610 (59%), Gaps = 30/610 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA----- 55 ME N N+F+AI LS ++ AW Y+ P+ ++ + + N + Sbjct: 1 MEYNRNFFIAIGLSFVVFVAWHFLYIVPQQAKLQESKIIAHKLSNHNSTFPANDMHFSNH 60 Query: 56 -------------VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 V + R L+ + RV +K L GSINL G +FDDL L+ Y L V Sbjct: 61 GLKDEIVSITNHHVTPEIRKAELAKTNRVLIKTNELEGSINLVGGKFDDLLLKKYRLTVD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKIL-TPTTPIKLVF 160 SP + LL+P+ YFAE ++S++ + LP SNT W + + TP+TPI L++ Sbjct: 121 KTSPEIILLNPNGLTTTYFAEFSFISSSLPAKALPQSNTKWQIEGNNTILTPSTPITLIY 180 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 N +F R S+D HY+F I D+++N S I S RI R P TN Sbjct: 181 NNGQGQIFRRIFSVDNHYMFTIKDSISNESSSPIHLSSYARIARAAPPEDTNATYFLHEG 240 Query: 221 IAVLGDKSLVEQKY---------SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + SL +KY + S+ + + W+GI+DKYWA IP ++ + Sbjct: 241 MIGIAGDSLKTEKYTALAELNPNPKNGQKSVIFSNVTGGWVGITDKYWAVAVIPPQDKEY 300 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 S+F Y + YQ+ + +T+ P ++ T TN LFAGAK I+HY+ L I +F Sbjct: 301 TSRFVYFDQLNTHYQSDLQSALLTVSPHETKTITNRLFAGAKRVEIINHYQNQLKINKFS 360 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +LIDWGWF FI KPMF + Y GNFG+ I+L TV +K+L FPLA K Y S A++K Sbjct: 361 LLIDWGWFDFITKPMFAFIDILYKYTGNFGVTILLITVLLKILLFPLAHKSYKSMAHIKL 420 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 IQP + E++EK+ + Q+A+I+LYKT INPLAGCWP+L+Q P+FFA+YKV+ I++ Sbjct: 421 IQPMMLEIKEKYAHDRNK-QQQAIIELYKTKKINPLAGCWPVLIQFPIFFALYKVLYITI 479 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 EMRHAPF+GWIKDLAA DPT+IF LFG+LP+ +P F+ +G WP+IM ++MF+QM+M+P P Sbjct: 480 EMRHAPFFGWIKDLAAPDPTSIFNLFGLLPYTVPVFLTLGAWPLIMGITMFLQMQMNPLP 539 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D Q ++ W+PV+F L+SFPAGL+IYW+W+N++SI+QQ++IMK G +I D L+ Sbjct: 540 QDPTQVIVFRWIPVIFTVMLASFPAGLVIYWAWNNILSIIQQSIIMKCQGVKIEFFDNLK 599 Query: 572 STFSKNYNSQ 581 + K+ + Sbjct: 600 AIVQKDTKKE 609 >gi|254421078|ref|ZP_05034802.1| 60Kd inner membrane protein [Brevundimonas sp. BAL3] gi|196187255|gb|EDX82231.1| 60Kd inner membrane protein [Brevundimonas sp. BAL3] Length = 599 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 214/599 (35%), Positives = 332/599 (55%), Gaps = 23/599 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----EMNNERKNIQTVKQPNQVDNSYAAV 56 E + N + I S +I+ + + P+ E + ++ + Sbjct: 4 ENSRNTIIFIVCSALILGVYWFAVLRPQAERRAVQQQAQAEQSQTAENAARTALSPQGPT 63 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + DR+QALS + RV +++ +L GS++L+G + DDL L Y P V L P Sbjct: 64 FVTDRSQALSTAARVPIQSGTLKGSLSLQGGRIDDLFLTDYKETQDKPEP-VELFRPQGM 122 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 +NAYFA+ + +P NTVW L +G LTPTTP+ L + N + F R +S+D+ Sbjct: 123 QNAYFAQFGWTGPNVVGGVPGPNTVWRLTAGSTLTPTTPVTLTWDNGQGLRFTRLVSVDD 182 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLG---DKSLVEQ 232 Y+F I+DTV N I +P G + R P A ++ V EG I G D ++ Sbjct: 183 RYVFSILDTVQNLGTQSITIAPYGSVQRQGVPPLAGSSHIVHEGAIGTFGKPGDYRTEQK 242 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSA 291 KY D K + WLGI+DKYW + +P + + ++F+ +G + +A Sbjct: 243 KYKDWLKEPRIENASTGGWLGITDKYWLAALLPQQNEAVETEFRVRDVNGGQQLEANILG 302 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 TI PG + T T LFAG K + YE+ L +PRF IDWG F+F+ +P+F ++ Sbjct: 303 AARTIQPGGTATETQRLFAGVKRAEVLKTYEETLHLPRFVYAIDWGMFWFLTRPIFWILE 362 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 Y LVG+FG+AI+ TV VKL+ FPLA Y S + M+N+QPK++E+++KFK PQ Sbjct: 363 NVYGLVGSFGVAILALTVIVKLVMFPLANNAYASMSKMRNLQPKMEEIKKKFKD-DPQKQ 421 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ + LY+ INP+AGC P++LQIPVF+A+YKV+++++EMRH PF G+I DL+A DP+ Sbjct: 422 QQETMALYQKEKINPVAGCLPLVLQIPVFYALYKVLTVTIEMRHQPFLGFIHDLSARDPS 481 Query: 472 NIFTLFGILPFYLPGFMHVGIW----------PIIMSLSMFIQMKMSPPPADKGQAMILN 521 ++ LFG++P+ +G + L+M++Q M+PP AD Q I Sbjct: 482 VVWNLFGLIPWNPATLPLLGGLLVGPLGIGLLAVAYGLTMWLQTAMNPPAADPVQRQIFQ 541 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 +MP+VF F ++ F AGL++YW+WSN+++I+QQ IM + AE + D + + K + Sbjct: 542 FMPLVFTFIMAPFAAGLLVYWAWSNILTILQQYYIMHRYKAENPIDDFI-ARIRKTKAA 599 >gi|332186329|ref|ZP_08388074.1| Inner membrane protein translocase component YidC, long form [Sphingomonas sp. S17] gi|332013697|gb|EGI55757.1| Inner membrane protein translocase component YidC, long form [Sphingomonas sp. S17] Length = 565 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 189/564 (33%), Positives = 295/564 (52%), Gaps = 13/564 (2%) Query: 2 ERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 E N+ V ++ +I++ W F+ + K + V + Sbjct: 3 EDRKNFVVFAVIAALILFGWPLIQSKFFPSNPPATKIVDGKQVP-VANSTANPTATTPSA 61 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 I DR L+ +PRV + P L GSINLKGA+ DDL L Y V+ +SP + LLSP+ + Sbjct: 62 IRDRRVVLAETPRVAIDTPRLKGSINLKGARIDDLVLLDYKETVAKDSPPIRLLSPAGAE 121 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 AYFA + + N ++ S +L P P+ L NA F+ T+S+D+ Sbjct: 122 GAYFAGFGWRTDGLNPPAADTV---WTASAPVLRPGQPVTLTAANATGQRFQITLSVDKD 178 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+F + TV N + + G + R + G Sbjct: 179 YMFTVQQTVANGGNAPVPVAAYGYVNRGISADPDSWTIHVGPMSVNDGTAHY--GPNWKD 236 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + F + WLG +DKYW + IP + +F QF+ + YQA ++ T+ Sbjct: 237 LDKAPTRFTTTGGWLGFTDKYWLATLIPDQSKAFDGQFR--AGAGQTYQADYTLQPQTLA 294 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PG+ +T T FAGAKE + Y + + +DWG+ + KP+F + + + LV Sbjct: 295 PGRQVTQTTRFFAGAKEVALLDRYTDKEGATKLDYALDWGYLRVLEKPIFYYLDWLFRLV 354 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GNFG+AI+L TV ++ L FP+A++Q+ S A M+ +QPK+ L+E++K +Q+ ++ Sbjct: 355 GNFGVAIILLTVTIRALMFPIAQRQFASMAAMRAVQPKMKALQERYKDDKV-RMQQEVMA 413 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPLAGC P L+QIP+F+A+YKV+ +++EMRH PF WIKDL+A DP LF Sbjct: 414 LYKQEKVNPLAGCLPTLIQIPIFYALYKVLMLTIEMRHQPFVAWIKDLSAPDPLTPVNLF 473 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 G+LPF P F+ +G+ PI++ +SM+ Q KM+P P D Q + +P V +F ++ F G Sbjct: 474 GLLPFTPPHFIAIGVVPILLGISMYFQFKMNPQPMDDAQKQVFAILPWVLMFVMAPFAVG 533 Query: 538 LIIYWSWSNVISIVQQAVIMKMHG 561 L +YW +N ISI+QQ ++ H Sbjct: 534 LQVYWITTNCISILQQRLLYARHP 557 >gi|254293247|ref|YP_003059270.1| hypothetical protein Hbal_0879 [Hirschia baltica ATCC 49814] gi|254041778|gb|ACT58573.1| 60 kDa inner membrane insertion protein [Hirschia baltica ATCC 49814] Length = 600 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 201/597 (33%), Positives = 323/597 (54%), Gaps = 24/597 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDNSYAA 55 + ++ + I L + ++ Q F P+ + R I + ++ A+ Sbjct: 6 QDQKSFMIGIGLVLCVMALSQFFIWGPQQKAQEQARLEAQAQAAIAAPSVSSGSVDTTAS 65 Query: 56 VLIDDRAQAL---SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 DRA+ L S R++ S+ GSI+LKGA+ DDL+++ + + V LLS Sbjct: 66 AAPVDRAEILTDTSNGGRIDFDASSVDGSISLKGARLDDLSMKRHFETIEKTEE-VHLLS 124 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 P +K AY+A L + A+ LP +T+W +G LTP+TPI L ++ + F R I Sbjct: 125 PQGSKGAYYAALGWRGDAD--RLPGVSTLWKQTAGSTLTPSTPITLGYETTQ-LSFSRKI 181 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 +D++Y+F DTVTNNS + + P G + + F + + L Q Sbjct: 182 EVDDNYMFTYTDTVTNNSSETLSIRPFGFMRQFGMPDDWKPFYILHEGAVGMAGNKLKLQ 241 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG-HARYQAKFSA 291 KY +++K + W+G++ KYW + FIP++ + Q K + DG Y A Sbjct: 242 KYKNLDKGKALAYTSQGGWIGLTQKYWMTAFIPAQTENVAVQSKVVMDGLRPTYVASIEG 301 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEK----DLAIPRFEMLIDWGWFYFIAKPMF 347 + I PG++ + + +FAGAK + Y++ AIPRF +DWG F+F KP F Sbjct: 302 TDRAIEPGQTASYSQRIFAGAKRVEVLDAYQQGATGQEAIPRFTDAVDWGNFWFFTKPFF 361 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+S+F + GNFG+AI+ TV VKL FFP+ K Y S A M+ + P+++E+++K+ Sbjct: 362 WLLSHFNSWFGNFGLAILALTVIVKLAFFPIQNKAYASMAKMRKLMPQMEEIKKKWADDK 421 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 QK ++LYK NP +GC P++ Q+ VF+ +YK + ++LEMRH PF+GWIKDL+A Sbjct: 422 E-RQQKETMELYKREKANPFSGCLPLIPQMFVFYGLYKTLFVTLEMRHEPFFGWIKDLSA 480 Query: 468 ADPTNIFTLFGILPFYLPGF-----MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DPT+ LFG LPF + +G+ PI+ +M++ ++ PP D Q M++ + Sbjct: 481 PDPTSFLNLFGALPFDPSSLPLIGALSIGVLPILYGFTMWLLQNLNAPPPDPTQRMMMQF 540 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 +P+VF F + F AGL+IYW+WSN++SI QQ IM+ +G E +++ F K+ Sbjct: 541 LPIVFTFIFAGFAAGLVIYWTWSNILSIAQQYYIMRKNGVETQFDKFIKAKFGKSEE 597 >gi|148284763|ref|YP_001248853.1| putative inner membrane protein translocase component YidC [Orientia tsutsugamushi str. Boryong] gi|146740202|emb|CAM80485.1| 60 kD inner-membrane protein, preprotein translocase subunit [Orientia tsutsugamushi str. Boryong] Length = 567 Score = 375 bits (962), Expect = e-101, Method: Composition-based stats. Identities = 203/570 (35%), Positives = 329/570 (57%), Gaps = 11/570 (1%) Query: 1 ME-RNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN---SYAA 55 M+ N N +AI LS+ I+ W FY PR+ +M+N +K + + + +A Sbjct: 1 MDSDNRLNLILAITLSLAIILGWHFFYEKPRLIKMSNAQKEKIEYNKRSSTNQYLLHESA 60 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + I D+ + S RV++ L GSI+LKG +FDDL L GY DV NSP V LLSPS Sbjct: 61 LKIKDKVDIIDYSTRVKIMTNKLHGSISLKGLRFDDLILVGYKQDVLENSPDVELLSPSE 120 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 T AYFAE+ + N ++ IL + N +N+ F ++S+D Sbjct: 121 TATAYFAEVGWYCAKNADSDFPNSDTLWQTDKSILQANDTTTFTWTNKHNVQFIVSVSID 180 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++Y+F I ++ NNS Q+ G I R+ + + Q ++ L E Y+ Sbjct: 181 DNYMFTINQSIVNNSKQQLAVQFHGLIHRNLAENENSANIFQGPIASIDSY--LNEVTYN 238 Query: 236 DIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN-E 293 +++ +++ + WLGISDKYW + FIP + + + F Y G +YQ F + E Sbjct: 239 KLKEKKHIDYNLNVVHWLGISDKYWLTSFIPDVKYRYSTSFMYGKAGFEKYQVSFLSPKE 298 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + G S++ + LF GAKE + +Y + I F+ ID+GWFY + KP+F +S+F Sbjct: 299 VVNSDGGSLSVVHHLFLGAKEVKLLDYYAEKYNIKLFDRAIDFGWFYILTKPLFYTLSFF 358 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y GNFG++I++ T+ +K++ F + + Y S M+++QP+I L+E + + L + Sbjct: 359 YKYCGNFGVSILIVTILIKIMMFSFSNRSYSSMKKMRDLQPRIQRLQELYGDDKIK-LHQ 417 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 ++ LYK ++ L+Q+P+FF++YKV+ +++EMRHAPF WIKDL+A DPT I Sbjct: 418 EIMALYKKEKVSLAGSFLQSLIQLPIFFSLYKVLHVTIEMRHAPFLSWIKDLSALDPTCI 477 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALS 532 F LFG+LPF++PGF+++G P++ S +M +Q K++P P D QA +L +MP++ + + Sbjct: 478 FNLFGLLPFHVPGFLNIGALPVLTSATMILQQKINPAPTADPAQAQVLKFMPLILLIVFN 537 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +FPAGL+IYW+W+N++SIVQQ +I K++ Sbjct: 538 NFPAGLLIYWTWNNILSIVQQFIINKINNK 567 >gi|329848429|ref|ZP_08263457.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain-containing protein [Asticcacaulis biprosthecum C19] gi|328843492|gb|EGF93061.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain-containing protein [Asticcacaulis biprosthecum C19] Length = 624 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 200/620 (32%), Positives = 320/620 (51%), Gaps = 42/620 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD------NSYAA 55 + N + S+++++ +Q F P+ ++ +R + A Sbjct: 6 QDTRNMIYFLIASMVLLFGYQYFVTGPQQKKAQEQRAVAAAQASASSSSAVAAGLPVTGA 65 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + R QA++ +PRV++ PSL GS++LKGA DDL L+ Y + SP V LL P+ Sbjct: 66 AAVMTREQAIAAAPRVKIDTPSLRGSLSLKGALVDDLYLKSYKETTKAGSPDVELLRPAG 125 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + AY+ + Y+ N LP++NT+WNL SG +L+P P+ L N ++F RT+S+D Sbjct: 126 SDRAYYVQSGYIGQ-NIPGLPDANTMWNLQSGNVLSPGKPVVLTHDNGAGLMFTRTLSID 184 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG----------VQEGFIAVLG 225 ++Y+ + + V N + FSP ++R + G + + Sbjct: 185 DNYMITVAEAVANTGAGPVAFSPYSTVIRFDMPAGLDRTGVVHEGAIATFPNKIEAGKID 244 Query: 226 DKSLVEQKYSDIEKSSISNFHESN----SWLGISDKYWASVFIPSKETSFHSQFKYL-SD 280 KY D+ K + W G++DKYW + IP+++ + + Sbjct: 245 RYKTQSLKYKDMAKEPEKKVFKDVASVGGWFGLTDKYWMAAVIPAQDQPVRFTTQANVQN 304 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y+A + +T+ PG++ + + +FAGAK + YE DL IPRF DWG Sbjct: 305 NKPIYRAGYLDETVTVAPGQTWQSQSHIFAGAKLNSQLQAYENDLKIPRFGYATDWGSLQ 364 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ PM+ L+ Y +GNFG AI+ TV VK++F+PLA K Y S MK +Q ++ Sbjct: 365 FLTYPMYWLLDKLYGFLGNFGFAILALTVIVKIVFYPLAHKAYESMTKMKQVQDRLKPKL 424 Query: 401 EKFKQS---PPQVLQKAMIQLYKTHNINPLAG---CWPILLQIPVFFAIYKVISISLEMR 454 + K PQ Q+A ++LY+ +NP+AG C P+LLQIPVF+A+YKV+ +++EMR Sbjct: 425 DAIKSRFPDDPQKQQEATMKLYQDEKVNPMAGLGGCLPMLLQIPVFWALYKVLILAIEMR 484 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF----------MHVGIWPIIMSLSMFIQ 504 HAPF+GWIKDL+A DPT+ LFG+LPF +H+G+ I+ LSM++ Sbjct: 485 HAPFFGWIKDLSAPDPTSFVNLFGLLPFEPATVPLIGGILAGPLHLGVVAILYGLSMWLS 544 Query: 505 MKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +M+P D Q +L +MPV+ F ++ GLIIYW WSN+++I QQ IM E Sbjct: 545 QQMTPTANVDPMQKKMLAFMPVILTFFMAQVAVGLIIYWIWSNILTIFQQWTIMHRLKVE 604 Query: 564 IGLI---DRLRSTFSKNYNS 580 + ++R+ + + Sbjct: 605 NPIDTGIGKVRALLDRKKAA 624 >gi|56552522|ref|YP_163361.1| putative inner membrane protein translocase component YidC [Zymomonas mobilis subsp. mobilis ZM4] gi|59803051|sp|Q9RNL5|OXAA_ZYMMO RecName: Full=Inner membrane protein oxaA gi|56544096|gb|AAV90250.1| YidC translocase/secretase [Zymomonas mobilis subsp. mobilis ZM4] Length = 579 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 174/585 (29%), Positives = 297/585 (50%), Gaps = 11/585 (1%) Query: 1 MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ N + LS +I++ W F + + + + Sbjct: 1 MDDKHQQRNLVIVTILSALILFGWS-FVTKHWLSTPPAPTQQGKNQPKAELTAEESGDKP 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + Q L +PR+ + S+ GS+NLKG + DDL L + ++ NSP V L SP+ T+ Sbjct: 60 LKPVDQVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTE 119 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 NA+F + T N+ LPN++++W S K+ P+ + N +F T+S+D Sbjct: 120 NAWFTSFGW--TGENVALPNADSLWKADSDKLTADH-PVNFYWNNQQGQIFRITLSVDHD 176 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+F ++V N + P +++ + G I V ++DI Sbjct: 177 YMFNATESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADI 236 Query: 238 EKSSISNFHESN--SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +K++ ++ + W+G SDKYW + P + S + YQA F+ + Sbjct: 237 DKATNNSIRNNTQGGWIGFSDKYWLTALAP-HNQKIAIDTDFRSSSNHHYQADFTVAPVV 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + GK+ +T+ +FAGAKE + Y L +P F+ IDWGWF I K F + + + Sbjct: 296 VAAGKTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFL 355 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L ++ L FP+A KQY S A+M+ +QPK+ +RE++K +++ + Sbjct: 356 HVGNYGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEA-RMRQEL 414 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY+ +NP AGC P+ +Q P+F A+YK + +++E RH PF WIKDL+A DP F Sbjct: 415 VTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFN 474 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+L F P F+ +G+ PII+ ++M++Q + SP + Q I++++P++ V ++ Sbjct: 475 LFGLLHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLA 534 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 AGL +Y+ ++N+IS+ Q + H DR + Sbjct: 535 AGLQVYYIFNNLISLAQMMWLQHRHSTPEERQDRAERKRPSKKKA 579 >gi|162147919|ref|YP_001602380.1| inner membrane protein oxaA [Gluconacetobacter diazotrophicus PAl 5] gi|161786496|emb|CAP56078.1| putative inner membrane protein oxaA [Gluconacetobacter diazotrophicus PAl 5] Length = 572 Score = 372 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 188/560 (33%), Positives = 300/560 (53%), Gaps = 15/560 (2%) Query: 32 EMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSP----RVELKNPSLIGSINLKGA 87 E+ + P + A V + +P R+ + P + GSI+L GA Sbjct: 14 EVAQQAAQTSRQTPPTDAARAPAPVAGASSQPVSTPAPQAETRLAIDAPKVAGSIDLLGA 73 Query: 88 QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147 + DD+ LR YH V+ SP V +L P + + + E+ +++ T Sbjct: 74 RLDDMVLRDYHETVAKGSPQVRILEPGHDQQPNYVEIGWMNLPGGQVRVPDATTVWSADA 133 Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 LT P+ L + N + F+ +S+D HY+F I + N S + P R+ R Sbjct: 134 PKLTSDRPVTLSWDNGAGVTFQIVVSIDAHYMFGIEQRIVNRSAQPVSLYPYARVDRAYT 193 Query: 208 QTATNTFGVQEGFI----AVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASV 262 T T + V EG I L + S + ++S W GI+DKYW + Sbjct: 194 PTETGGYLVHEGPISVIDGRLDESSYKSLRTGATPPGNLSWTKGGQGGWAGITDKYWLTA 253 Query: 263 FIPSKETSFHSQFKYL-SDGHARYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHH 320 IP + T+ + Y + G YQ F A T + PG + T + +FAGAKE + Sbjct: 254 VIPQQGTAVTGSYGYQANGGAGVYQVGFIAQAATVVAPGTTGATVSHVFAGAKEVNLLEQ 313 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 Y+ L IP F +D+GWF F+ +P+F ++ + L+GNFG+A+M T+ VK LFFPLA Sbjct: 314 YQSSLHIPDFWKAVDFGWFAFLTRPIFYVLDWLNTLLGNFGLALMAFTLLVKALFFPLAT 373 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 +Q+ S A M+ +QPK+ ELRE++ +S L + M+ LYK +NP AGC P+++QIPVF Sbjct: 374 RQFRSMAKMRQLQPKVQELRERY-KSDQMALNQNMMALYKAEGVNPAAGCLPMVVQIPVF 432 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG---FMHVGIWPIIM 497 +++YK + I++EMRHAPF+GWI DL+A D TN+F LFG++P+ ++ +G+WPI+ Sbjct: 433 WSLYKDLYITIEMRHAPFFGWIHDLSAPDLTNLFNLFGLIPWDPNVLSPYLQLGVWPILF 492 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +MF+Q K++P P D Q + MPV+F F ++ PAGL+IY+ W+N++++ QQ VI Sbjct: 493 GATMFLQQKLNPAPTDPAQQRMFQMMPVLFTFFMARQPAGLVIYYCWNNLLTVAQQMVIQ 552 Query: 558 KMHGAEIGLIDRLRSTFSKN 577 + + + + + + + Sbjct: 553 RRMKSAVDKVGAIPAAAGRK 572 >gi|88607700|ref|YP_505133.1| putative inner membrane protein translocase component YidC [Anaplasma phagocytophilum HZ] gi|88598763|gb|ABD44233.1| inner membrane protein, 60 kDa [Anaplasma phagocytophilum HZ] Length = 568 Score = 372 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 188/579 (32%), Positives = 310/579 (53%), Gaps = 22/579 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ SV I+ W+ Y + E + + + V Sbjct: 1 MSEVRNLILAVVASVAIMLGWKYIYGEFFAVKTVPEG----VQESESLIPEVDDIVDYAS 56 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + AL PRVELKN L S++L+GA DD +L Y + + NS V L+SP T + Sbjct: 57 YSDALKQVPRVELKNSKLAASVSLRGALIDDASLVKYRVSLDKNSENVLLMSPEGTVSDS 116 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E +V + +++P +TVW L G + + + N ++F S+D+ Y+ Sbjct: 117 MVEFGWVDPKHVLKVPGRDTVWALEDG---SDEQNFTIRWDNGEGLIFRLKFSVDQDYML 173 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + V NN+ + + GRI R +++ + + EG I G L E Y ++E++ Sbjct: 174 TVAQEVINNTDVNVHLAHYGRINRAHSKSSKSFWISHEGAIGSFGHG-LKEWTYKNLEEA 232 Query: 241 S------ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS---DGHARYQAKFSA 291 ++ SW+G +DKYW + IPS F+ +G +R+Q +S Sbjct: 233 GSIRLSGVTREDGGRSWIGFADKYWFTALIPSASEQGKLAFRTQRVYREGASRFQVDYSK 292 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + TI + LF GAKE + Y+ L IP F+ +D+G YFI KP+F+L+ Sbjct: 293 SHGTIGAHDKVEAVTHLFMGAKELELLDQYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQ 352 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 YF+ L+GNFG+AI++ TV +KL+ FPL+ + YVS +K +QP++ ++E +K + Sbjct: 353 YFHKLLGNFGLAIVMLTVAIKLVAFPLSMRSYVSMFKLKRLQPEVLRIKELYKTDDL-RI 411 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 K + L+K H ++PL+G P+L+QIP+FFA+YKV+ +++EMRHAP +GWI+DL++ D Sbjct: 412 SKEIASLFKKHKVSPLSGFLPVLIQIPIFFALYKVLFVTIEMRHAPLFGWIRDLSSQDTA 471 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPADKGQAMILNWMPVVFVFA 530 N LFG++P P +G+ P+++ L+M +Q K M A + ++ ++P +FVF Sbjct: 472 NFLNLFGLIPLEPPF--CIGVLPVVLGLTMVLQQKVMQKDQATPDRYGVMKFLPYIFVFV 529 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 SSFP+GL++YW SNVI+I+QQ ++++ L Sbjct: 530 FSSFPSGLVLYWICSNVITILQQ-IVIRYFVCRKELGAN 567 >gi|241762238|ref|ZP_04760320.1| 60 kDa inner membrane insertion protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373285|gb|EER62904.1| 60 kDa inner membrane insertion protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 579 Score = 371 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 174/585 (29%), Positives = 297/585 (50%), Gaps = 11/585 (1%) Query: 1 MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ N + LS +I++ W F + + + + Sbjct: 1 MDDKHQQRNLVIVTILSALILFGWS-FVTKHWLSTPPAPTQQGKNQLKAELTAEESGDKP 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + Q L +PR+ + S+ GS+NLKG + DDL L + ++ NSP V L SP+ T+ Sbjct: 60 LKPVDQVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTE 119 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 NA+F + T N+ LPN++++W S K+ P+ + N +F T+S+D Sbjct: 120 NAWFTSFGW--TGENVALPNADSLWKADSDKLTADH-PVNFYWNNQQGQIFRITLSVDHD 176 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+F ++V N + P +++ + G I V ++DI Sbjct: 177 YMFNATESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADI 236 Query: 238 EKSSISNFHESN--SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +K++ ++ + W+G SDKYW + P + S + YQA F+ + Sbjct: 237 DKATNNSIRNNTQGGWIGFSDKYWLTALAP-HNQKIAIDTDFRSSSNHHYQADFTVAPVV 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + GK+ +T+ +FAGAKE + Y L +P F+ IDWGWF I K F + + + Sbjct: 296 VAAGKTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFL 355 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L ++ L FP+A KQY S A+M+ +QPK+ +RE++K +++ + Sbjct: 356 HVGNYGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEA-RMRQEL 414 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY+ +NP AGC P+ +Q P+F A+YK + +++E RH PF WIKDL+A DP F Sbjct: 415 VTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFN 474 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+L F P F+ +G+ PII+ ++M++Q + SP + Q I++++P++ V ++ Sbjct: 475 LFGLLHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLA 534 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 AGL +Y+ ++N+IS+ Q + H DR + Sbjct: 535 AGLQVYYIFNNLISLAQMMWLQHRHSTPEERQDRAERKRLSKKKA 579 >gi|5932359|gb|AAD56912.1|AF180145_4 60KD inner-membrane protein yidC [Zymomonas mobilis subsp. mobilis ZM4] Length = 579 Score = 371 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 172/585 (29%), Positives = 295/585 (50%), Gaps = 11/585 (1%) Query: 1 MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ N + LS +I++ W F + + + + Sbjct: 1 MDDKHQQRNLVIVTILSALILFGWS-FVTKHWLSTPPAPTQQGKNQPKAELTAEESGDKP 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + Q L +PR+ + S+ GS+NLKG + DDL L + ++ NSP V L SP+ T+ Sbjct: 60 LKPVDQVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTE 119 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 NA+F + T N+ LPN++++W S K+ P+ + N + T+ +D Sbjct: 120 NAWFTSFGW--TGENVALPNADSLWKADSDKLTADH-PVNFYWNNQQGQILRITLCVDHD 176 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+F ++V N + P +++ + G I V ++DI Sbjct: 177 YMFNATESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADI 236 Query: 238 EKSSISNFHESN--SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +K++ ++ + W+G SDKYW + P + S + YQA F+ + Sbjct: 237 DKATNNSIRNNTQGGWIGFSDKYWLTALAP-HNQKIAIDTDFRSSSNHHYQADFTVAPVV 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + GK+ +T+ +FAGAKE + Y L +P F+ IDWGWF I K F + + + Sbjct: 296 VAAGKTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFL 355 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L ++ L FP+A KQY S A+M+ +QPK+ +RE++K +++ + Sbjct: 356 HVGNYGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEA-RMRQEL 414 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY+ +NP AGC P+ +Q P+F A+YK + +++E RH PF WIKDL+A DP F Sbjct: 415 VTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFN 474 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+L F P F+ +G+ PII+ ++M++Q + SP + Q I++++P++ V ++ Sbjct: 475 LFGLLHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLA 534 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 AGL +Y+ ++N+IS+ Q + H DR + Sbjct: 535 AGLQVYYIFNNLISLAQMMWLQHRHSTPEERQDRAERKRPSKKKA 579 >gi|260753817|ref|YP_003226710.1| inner membrane protein translocase component YidC [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553180|gb|ACV76126.1| 60 kDa inner membrane insertion protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 579 Score = 371 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 175/585 (29%), Positives = 297/585 (50%), Gaps = 11/585 (1%) Query: 1 MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ N + LS +I++ W F + + + + Sbjct: 1 MDDKHQQRNLVIVTILSALILFGWS-FVTKHWLSTPPAPTQQGKNQPKAELTAEESGDKP 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + Q L +PR+ + S+ GS+NLKG + DDL L + ++ NSP V L SP+ T+ Sbjct: 60 LKPVDQVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTE 119 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 NA+F + T N+ LPN++++W S K+ P+ + N +F T+S+D Sbjct: 120 NAWFTSFGW--TGENVALPNADSLWKADSDKLTAEH-PVNFYWNNQQGQIFRITLSVDHD 176 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+F ++V N + P +++ + G I V ++DI Sbjct: 177 YMFNATESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADI 236 Query: 238 EKSSISNFHESN--SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +K++ ++ S W+G SDKYW + P + S + YQA F+ + Sbjct: 237 DKATNNSIRNSTQGGWIGFSDKYWLTALAP-HNQKIAIDTDFRSSSNHHYQADFTVAPVM 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + GK+ +T+ +FAGAKE + Y L +P F+ IDWGWF I K F + + + Sbjct: 296 VAAGKTASTSVDVFAGAKEVRVLDRYRDQLHLPHFDKAIDWGWFAIIEKVFFYYLDWLFL 355 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L ++ L FP+A KQY S A+M+ +QPK+ +RE++K +++ + Sbjct: 356 HVGNYGLAIILMVFTIRALIFPIANKQYASMASMRRLQPKMQAVRERYKNDEA-RMRQEL 414 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY+ +NP AGC P+ +Q P+F A+YK + +++E RH PF WIKDL+A DP F Sbjct: 415 VTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLLVTIESRHQPFILWIKDLSAPDPLTPFN 474 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 LFG+L F P F+ +G+ PII+ ++M++Q + SP + Q I++++P++ V ++ Sbjct: 475 LFGLLHFTPPHFLMIGVLPIILGITMWLQFRASPQQLEPAQQQIMSFLPLISVIFMAPLA 534 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 AGL +Y+ ++N+IS+ Q + H DR + Sbjct: 535 AGLQVYYIFNNLISLAQMMWLQHRHSTPEERQDRAERKRLSKKKA 579 >gi|330993393|ref|ZP_08317328.1| Inner membrane protein oxaA [Gluconacetobacter sp. SXCC-1] gi|329759423|gb|EGG75932.1| Inner membrane protein oxaA [Gluconacetobacter sp. SXCC-1] Length = 578 Score = 370 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 187/568 (32%), Positives = 304/568 (53%), Gaps = 23/568 (4%) Query: 9 VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS 68 VA ALS +++ ++ F K ++ + + V + + Sbjct: 2 VATALSAVVLVGFEYFLP-------QQNHKTVEQQAPAPEAPPASTPVTAAAPSASDQPD 54 Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 PRV + + GS++L+GA+ DDL L+ YH V + SP+V +L P + E+ + + Sbjct: 55 PRVAIDADRVHGSLDLRGARLDDLVLKNYHETVQNGSPLVRVLEPRGQEQPNLVEVGWAN 114 Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN 188 + LT P+ L + N +F T+++D++Y+F + VTN Sbjct: 115 VSGGHVAVPDANTLWTADHDSLTQARPVTLSWDNGQGQVFSITVAIDQNYMFSVTQKVTN 174 Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE- 247 + + + P R+ R T + V EG I+V+ L E Y + K ++ + Sbjct: 175 HGGEPVSLYPFSRVERGYTPVETGGYLVHEGPISVIDH-RLDESSYKSLRKGAVPPGNIA 233 Query: 248 -----SNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHARYQAKFSANEIT-ILP 298 W GI+DKYW + IP +++ + Y + Y F+A + Sbjct: 234 WTKAGQGGWAGITDKYWLAAVIPQQDSDVAGTYAYQGAGNGDKGTYDVGFTARAPLVVAA 293 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G +T + +FAGAKE P + YE L IP F +D+GWF F+ +P+F ++ + ++G Sbjct: 294 GGEASTASHVFAGAKEVPLLEKYESSLHIPDFWKAVDFGWFAFLTRPIFTVLDWLNTMLG 353 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 NFG+A+M T+ VK LFFPLA KQ+ S M+ +QPKI LRE++K L + MI L Sbjct: 354 NFGLALMAFTLLVKALFFPLATKQFHSMGKMRQLQPKIKALRERYKD-DQMALNQQMIGL 412 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP +GC P+LLQIPVF+ +YK + +++EMRHAPF+GWI DL+A DPTN+FTLFG Sbjct: 413 YKQEGVNPASGCLPMLLQIPVFWCLYKDLYVTIEMRHAPFFGWIHDLSAFDPTNLFTLFG 472 Query: 479 ILPFYLPGF---MHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSF 534 ++P+ + +G+WPI L+MF QM+++P P D Q + +MP++F F ++ Sbjct: 473 LIPWNPSVISPMLQLGLWPIAFGLTMFAQMRLNPTPTADPAQQKMFQFMPIIFTFFMARQ 532 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P+GL+IY+ W+N++++ QQ +I + Sbjct: 533 PSGLVIYYCWNNLLTMAQQTLIQRRMNK 560 >gi|226947217|ref|YP_002802290.1| putative inner membrane protein translocase component YidC [Azotobacter vinelandii DJ] gi|259515637|sp|C1DNF7|OXAA_AZOVD RecName: Full=Inner membrane protein oxaA gi|226722144|gb|ACO81315.1| inner membrane protein, translocase subunit YidC [Azotobacter vinelandii DJ] Length = 557 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 141/578 (24%), Positives = 246/578 (42%), Gaps = 50/578 (8%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTV---------KQPNQ 48 M+ + +AL S ++V W Y + N ++ Sbjct: 1 MDI-KRSILLVALAVVSYLLVLQWNQDYGQAALPPQNAVAQSASPALPETVPGDSSTSAD 59 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 V + + + D A + + S ++++ L +I+ +G L L + Sbjct: 60 VPTAGSGNQVPDSAASTAGSDLIQVRTDVLEVAIDPRGGDIVQLKLPKFPRRQDHPEIPF 119 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNAN 164 L + ++ Y A+ T + ++ + + L F + Sbjct: 120 QLF-DNGSERLYLAQSGLTGTNGPDARADGRPLYVSEQRSYQLADGQDSLVVDLKFSDGG 178 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 +R Y ++ + N+S + ++ R G Sbjct: 179 VDYVKRFTFKRGAYDLEVRHQIANHSEQPWSGNLFAQLKRDASADPSSTTATGTATYLGA 238 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 ++ + D++ ++ W+ Y+ + ++P+K+ + + D Sbjct: 239 ALWTSEEPYRKVSMGDMDDKNLRET-VQGGWVAWLQHYFVTAWVPNKDDTNLVATR--KD 295 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y F+ + + I G + T L+AG K+ + P E+ +D+G+ + Sbjct: 296 SQGNYIIGFTGSTLNIPAGATGETVTRLYAGPKDQNQLEALS-----PGLELTVDYGFLW 350 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + L+GN+G +I++ TV +KL FFPL+ Y S M+ + PK+ L+ Sbjct: 351 FIAQPIFWLLELIHALLGNWGWSIIVLTVIIKLAFFPLSAASYRSMGRMRAVAPKLQALK 410 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q L +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ G Sbjct: 411 EQH-GEDRQKLSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWLG 469 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MF Q ++P P D QA ++ Sbjct: 470 WITDLSVKDPYF-------------------ILPIIMGATMFFQQTLNPTPPDPMQARVM 510 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MP++F F FPAGL++YW +NV+SI QQ I + Sbjct: 511 KLMPIIFTFFFLWFPAGLVLYWVVNNVLSIGQQWYITR 548 >gi|92115431|ref|YP_575359.1| putative inner membrane protein translocase component YidC [Chromohalobacter salexigens DSM 3043] gi|91798521|gb|ABE60660.1| protein translocase subunit yidC [Chromohalobacter salexigens DSM 3043] Length = 575 Score = 368 bits (945), Expect = 1e-99, Method: Composition-based stats. Identities = 146/582 (25%), Positives = 247/582 (42%), Gaps = 50/582 (8%) Query: 2 ERNWNYFVAI---ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 + I L+ ++V W Y +E T + + A Sbjct: 13 MDVKRLLLVIPLAVLAYLLVIQWNADYGQNNVEHSAPTSVAQGTTDSDDASEGLSAPSAS 72 Query: 59 DDRAQALSMSP-------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + A S ++++ L I+ +G L + + S+ Sbjct: 73 NAGNNASPDSAGMPGEKSQTDANGLIQVRTDVLDLRIDPRGGDVVYAALPKHKASLDSDQ 132 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 P V L N +Y A+ + + + G+ + + L + Sbjct: 133 PFVLL--SDNNVRSYVAKSGLQLEGHEGRITYTPEQTEYTLGE-DQDSLTVDLKAEVNGV 189 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFI 221 + +R + Y + + N S + G++ R + G Sbjct: 190 NVIKRFVFDRNAYAVHVEYRLDNESQTPVSARFIGQLARDDSDDPSQGVSMGMKSFLGAT 249 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 + + + + DI +N W+ + Y+ S ++P + + D Sbjct: 250 FSTQESNYEKISFEDIRDGEFNNVESEGGWVAMIQHYFTSAWVPEQNQEN--LYYANIDS 307 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 R A F+ I PG++ L+ G K + P E+ +D+GW +F Sbjct: 308 RDRNVAAFAGPSQQIAPGETTRMAATLYMGPKIQDRLEAIA-----PHLELTVDFGWLWF 362 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA P+F L++ ++L+GN+G +I+L TV VK++ FPL+ K Y S A M+ + P++ ++E Sbjct: 363 IANPLFWLLAKIHSLIGNWGWSIVLLTVIVKIVLFPLSAKAYKSMAKMRKMGPEMKRIKE 422 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 ++ Q + + M++ Y+ INPL GC PI++Q+PVF A+Y ++ S+E+RHAPF W Sbjct: 423 QYGD-DRQKMSQEMMKFYQKEKINPLGGCLPIVVQMPVFIALYWMLLESVELRHAPFILW 481 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I DL+A DP I PIIM SMF+Q ++P P D QA I+ Sbjct: 482 INDLSAQDPYF-------------------ILPIIMGASMFVQQLLNPTPPDPMQAKIMK 522 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +PVVF F FPAGL+IYW +NVISI+QQ +I + A+ Sbjct: 523 MLPVVFTFFFLWFPAGLVIYWICNNVISILQQWIITRKIEAD 564 >gi|301064543|ref|ZP_07204939.1| putative membrane protein [delta proteobacterium NaphS2] gi|300441291|gb|EFK05660.1| putative membrane protein [delta proteobacterium NaphS2] Length = 551 Score = 367 bits (941), Expect = 4e-99, Method: Composition-based stats. Identities = 143/566 (25%), Positives = 253/566 (44%), Gaps = 24/566 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYA 54 M+ +A ALS +I+ W F+ +E E + + Sbjct: 1 MD--KKTILAFALSFVILVGWSLFFAPQPKKEPPKESSPESVQPEHEKSSVTISPAAPSK 58 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + ++ R+++ P + G L+ Y V+ SP V +++ Sbjct: 59 TIAAVEQPTVQQEEKRIKIDTPLYSAVFSNVGPTIKSFKLKKYRQTVNPESPFVEMVTLE 118 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 Y L S + + + ++ + + I N N I +T Sbjct: 119 EGMGDYLTILFDDSIDASTQNIAFSADKESLTLQQGSEPATIVFRGTNRNGIAITQTYRF 178 Query: 175 DEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 + T N + + R + P+ + + + +E + Sbjct: 179 HPDRYGIDLAVTAVNPNTVTVNGVFRTTLRALPPKDKGGYYAYVGFALFLDDKLDELEVE 238 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + + W+ D Y+ S +P K+LS G + Sbjct: 239 D----PGETKSATGTIGWICYEDNYFISAVVPEVPAKGSFTGKHLSSGVFEGV--YLPAA 292 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 +++ P T+ L+ G ++ + + K+ + I++GW IAKP+ ++ +F Sbjct: 293 VSLPPSAQATSEYELYLGPRDLSILKKFGKN-----LDKAINFGWTDIIAKPLLYVLKFF 347 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + N+G++I+L T+ VK+LF+PL K Y S M+ +QP++ +LREK+K Q L + Sbjct: 348 DAYLHNYGVSIILLTILVKILFWPLTHKSYKSMKEMQKLQPRMAKLREKYKGDK-QKLNQ 406 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M+ LYKT+ +NP+ GC P+++QIPVFFA+++V+ +E+RHAPF WI DL+A D Sbjct: 407 EMMALYKTYKVNPMGGCLPMVVQIPVFFALFRVLGACIELRHAPFIFWINDLSAPDRLFH 466 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 F+ +PF P + + + ++M SMFIQ KM+P P D QA I+ ++PV+F F + Sbjct: 467 FS--FQIPFMAPPY-GIPVLTLLMGASMFIQQKMTPSPGDPAQAKIMMFLPVIFTFMFIN 523 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKM 559 FP+GL++YW +N++SI QQ I K Sbjct: 524 FPSGLVLYWLVNNLLSIGQQYRIYKK 549 >gi|26986751|ref|NP_742176.1| putative inner membrane protein translocase component YidC [Pseudomonas putida KT2440] gi|60392875|sp|P0A140|OXAA_PSEPK RecName: Full=Inner membrane protein oxaA gi|60392876|sp|P0A141|OXAA_PSEPU RecName: Full=Inner membrane protein oxaA gi|24981341|gb|AAN65640.1|AE016190_6 inner membrane protein, 60 kDa [Pseudomonas putida KT2440] gi|45709|emb|CAA44417.1| unnamed protein product [Pseudomonas putida] gi|313496415|gb|ADR57781.1| OxaA [Pseudomonas putida BIRD-1] Length = 560 Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats. Identities = 147/582 (25%), Positives = 247/582 (42%), Gaps = 49/582 (8%) Query: 1 MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQ----------TVKQPNQ 48 M+ +A +S ++V W + Y + N + Sbjct: 1 MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASAD 60 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 V ++ A + A + +K L +I+ G LNL Y + Sbjct: 61 VPSANAESSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPNIPF 120 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNAN 164 L + + Y A+ T + ++ +L F + Sbjct: 121 QLF-DNGGERVYLAQSGLTGTDGPDARASGRPLYAAEQKSYQLADGQEQLVVDLKFSDNG 179 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGF 220 +R Y + + N S + ++ R +++ G Sbjct: 180 VNYIKRFSFKRGEYDLNVSYLIDNQSGQAWNGNMFAQLKRDASGDPSSSTATGTATYLGA 239 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI+K S+ S W+ Y+ + +IP+K + Q + D Sbjct: 240 ALWTASEPYKKVSMKDIDKGSLKEN-VSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--KD 296 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y ++ I++ G + T+ L+AG K + P E+ +D+G+ + Sbjct: 297 SQGNYIIGYTGPVISVPAGGKVETSALLYAGPKIQSKLKELS-----PGLELTVDYGFLW 351 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 352 FIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALK 411 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ Sbjct: 412 ERFGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWIL 470 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 471 WITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAKVM 511 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 512 KMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEA 553 >gi|148550509|ref|YP_001270611.1| putative inner membrane protein translocase component YidC [Pseudomonas putida F1] gi|166977400|sp|A5WBB7|OXAA_PSEP1 RecName: Full=Inner membrane protein oxaA gi|148514567|gb|ABQ81427.1| protein translocase subunit yidC [Pseudomonas putida F1] Length = 560 Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats. Identities = 147/582 (25%), Positives = 247/582 (42%), Gaps = 49/582 (8%) Query: 1 MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQ----------TVKQPNQ 48 M+ +A +S ++V W + Y + N + Sbjct: 1 MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASAD 60 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 V ++ A + A + +K L +I+ G LNL Y + Sbjct: 61 VPSANAESSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPNIPF 120 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNAN 164 L + + Y A+ T + ++ +L F + Sbjct: 121 QLF-DNGGERVYLAQSGLTGTDGPDARASGRPLYAAEQKSYQLADGQEQLVVDLKFSDNG 179 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGF 220 +R Y + + N S + ++ R +++ G Sbjct: 180 VNYIKRFSFKRGEYDLNVSYLIDNQSGQAWSGNMFAQLKRDASGDPSSSTATGTATYLGA 239 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI+K S+ S W+ Y+ + +IP+K + Q + D Sbjct: 240 ALWTASEPYKKVSMKDIDKGSLKEN-VSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--KD 296 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y ++ I++ G + T+ L+AG K + P E+ +D+G+ + Sbjct: 297 SQGNYIIGYTGPVISVPAGGKVETSALLYAGPKIQSKLKELS-----PGLELTVDYGFLW 351 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 352 FIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALK 411 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ Sbjct: 412 ERFGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWIL 470 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 471 WITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAKVM 511 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 512 KMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEA 553 >gi|167036430|ref|YP_001671661.1| putative inner membrane protein translocase component YidC [Pseudomonas putida GB-1] gi|189036357|sp|B0KRC1|OXAA_PSEPG RecName: Full=Inner membrane protein oxaA gi|166862918|gb|ABZ01326.1| 60 kDa inner membrane insertion protein [Pseudomonas putida GB-1] Length = 560 Score = 363 bits (931), Expect = 5e-98, Method: Composition-based stats. Identities = 145/582 (24%), Positives = 244/582 (41%), Gaps = 49/582 (8%) Query: 1 MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQ----------TVKQPNQ 48 M+ +A +S ++V W + Y + N + Sbjct: 1 MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASAD 60 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 V ++ A + A + +K L +I+ G LNL Y Sbjct: 61 VPSANAESSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPDIPF 120 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNAN 164 L + + Y A+ + ++ +L F + Sbjct: 121 QLF-DNGGERVYLAQSGLTGANGPDARASGRPLYAAEQKSYQLADGQEQLVVDLKFSDNG 179 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGF 220 +R Y + + N S + ++ R +++ G Sbjct: 180 VNYIKRFSFKRGEYDLNVSYLIDNQSGQAWSGNMFAQLKRDASGDPSSSTATGTATYLGA 239 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI+K + S W+ Y+ + +IP+K + Q + D Sbjct: 240 ALWTASEPYKKVSMKDIDKGGLKEN-VSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--KD 296 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y ++ I++ G + T+ L+AG K + P E+ +D+G+ + Sbjct: 297 SQGNYIIGYTGPVISVPAGGKVETSAMLYAGPKIQSKLKELS-----PGLELTVDYGFLW 351 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 352 FIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALK 411 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ Sbjct: 412 ERFGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWML 470 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 471 WITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAKVM 511 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 512 KMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEA 553 >gi|152983547|ref|YP_001351680.1| putative inner membrane protein translocase component YidC [Pseudomonas aeruginosa PA7] gi|166975880|sp|A6VF45|OXAA_PSEA7 RecName: Full=Inner membrane protein oxaA gi|150958705|gb|ABR80730.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 578 Score = 363 bits (931), Expect = 5e-98, Method: Composition-based stats. Identities = 142/602 (23%), Positives = 242/602 (40%), Gaps = 69/602 (11%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + + +S ++V W Y P + + Q + + + V Sbjct: 1 MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMNTTQGLPDTPSAAGTSSDVPT 60 Query: 59 DDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 A S + +++K L +I+ +G L L Y + Sbjct: 61 AQSGAAGSEAADKPVAVSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFP 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANN 165 L + + Y A+ +++ G +L F Sbjct: 121 LF-DNGRERTYLAQSGLTGADGPDASSAGRPLFHSAQGSYQLADGQNELVVDLSFSRDGV 179 Query: 166 ILFERTIS---------------------LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR 204 +R + Y + + N S + ++ R Sbjct: 180 NYIKRFTFHRGLKADCSDKEKAQKKIECINENAYQVGVSYLIDNQSGKTWSGNLFAQLKR 239 Query: 205 HKPQTATNT----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWA 260 ++T G D + D++K W+ Y+ Sbjct: 240 DGSADPSSTTATGVSTYLGAAVWTPDSPYKKISTKDMDKEQFKE-SVQGGWVAWLQHYFV 298 Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 + ++P+K + DG Y F+ +++ G + T L+AG K + Sbjct: 299 TAWVPTKGEQHQVMTR--KDGQGNYIVGFTGPTLSVPAGGKVETDLTLYAGPKLQKHLKE 356 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 P E+ +D+G+ +FIA+P+F L+ + ++L+GN+G +I+ TV +KL FFPL+ Sbjct: 357 LS-----PGLELTVDYGFLWFIAQPIFWLLQHIHSLIGNWGWSIIALTVLIKLAFFPLSA 411 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 Y S A M+ + PK+ ++E+ Q + +AM++LYK INPL GC PIL+Q+PVF Sbjct: 412 ASYRSMARMRAVSPKMQAIKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVF 470 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 ++Y V+ S+EMR AP+ GWI DL+ DP I PI+M + Sbjct: 471 LSLYWVLLESVEMRQAPWLGWITDLSVKDPFF-------------------ILPIVMGGT 511 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 M IQ ++P P D QA ++ MP++F F FPAGL++YW +NV+SI QQ I + Sbjct: 512 MLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLWFPAGLVLYWVVNNVLSIAQQWYITRKI 571 Query: 561 GA 562 A Sbjct: 572 EA 573 >gi|170724369|ref|YP_001752057.1| putative inner membrane protein translocase component YidC [Pseudomonas putida W619] gi|254773014|sp|B1JFV4|OXAA_PSEPW RecName: Full=Inner membrane protein oxaA gi|169762372|gb|ACA75688.1| 60 kDa inner membrane insertion protein [Pseudomonas putida W619] Length = 560 Score = 362 bits (928), Expect = 1e-97, Method: Composition-based stats. Identities = 146/582 (25%), Positives = 242/582 (41%), Gaps = 49/582 (8%) Query: 1 MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKN----------IQTVKQPNQ 48 M+ +A +S ++V W + Y + N Sbjct: 1 MDIKRTILIAALAIVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAANNGASAD 60 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 V ++ A + A + +K L +I+ G LNL Y Sbjct: 61 VPSANAESSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPDIPF 120 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNAN 164 L + + Y A+ ++ +L F + Sbjct: 121 QLF-DNGGERVYLAQSGLTGANGPDARSTGRPLYAAEQKSFQLADGQEQLVVDLKFSDNG 179 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGF 220 +R Y + + N S + ++ R +++ G Sbjct: 180 VNYIKRFSFKRGEYDLSVSYLIDNQSGQAWSGNMFAQLKRDASGDPSSSTATGTATYLGA 239 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI+K S+ S W+ Y+ + +IP+K + Q + D Sbjct: 240 ALWTAGEPYKKVSMKDIDKGSLKEN-VSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--KD 296 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y ++ I++ G T+ L+AG K + P E+ +D+G+ + Sbjct: 297 SQGNYIIGYTGPAISVPAGGKAETSAMLYAGPKIQSKLKELS-----PGLELTVDYGFLW 351 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 352 FIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALK 411 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ Sbjct: 412 ERFGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWML 470 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 471 WITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAKVM 511 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 512 KMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEA 553 >gi|269958897|ref|YP_003328686.1| inner membrane protein translocase component YidC [Anaplasma centrale str. Israel] gi|269848728|gb|ACZ49372.1| inner membrane protein translocase component YidC [Anaplasma centrale str. Israel] Length = 572 Score = 362 bits (928), Expect = 1e-97, Method: Composition-based stats. Identities = 187/580 (32%), Positives = 308/580 (53%), Gaps = 21/580 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ SV ++ W+ Y + E + V + + Sbjct: 1 MSEARNLVLAVVASVAVMVGWRFVYDK----VLTKESPQQREVASESLIPEVVDVAEYRP 56 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 RA A++ PRV L N +++ SI+LKGA DD++L+ Y + +S V L+SP T+ Sbjct: 57 RADAVNSVPRVGLGNSNVLASISLKGALVDDVSLKKYQVSTDKHSENVVLMSPEGTQEDS 116 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIKLVFKNANNILFERTISLDEHY 178 E ++ +++++P+ +T+W + + L + N ++F SLD Y Sbjct: 117 IVEFGWIDPKHSVKVPDKSTLWEVEQNSAADGDGESHTTLRWDNGQGLVFRLKFSLDRAY 176 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +F + V N++ + + + GRI + + + EG I G + L E Y D++ Sbjct: 177 MFSVSQEVENSTGEDLHLAYYGRINKAHAPDGKSYWISHEGAIGSFG-RGLQEWTYKDLQ 235 Query: 239 KSSISNFHESN----SWLGISDKYWASVFIPSKET-SFHSQFKYLS-DGHARYQAKFSAN 292 K + W+G++DKYW + +PS + K++ D +Q FS + Sbjct: 236 KENSIRVAAHEVAGSHWIGLADKYWFAALVPSSGGGKLAFRAKHIPRDDVDHFQVDFSRS 295 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + G T LF GAKE + Y L IP F+ +D+G YFI KP+F L+ Y Sbjct: 296 YGLVPAGGKAEATTQLFIGAKELAVLDDYRSKLNIPLFDKAVDFGILYFITKPVFRLLQY 355 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F+ +VGNFG+AI++ T+ +KL+ FPLA K YVS +K +QP+I ++E +K + Sbjct: 356 FHKVVGNFGLAIIMLTISIKLVVFPLASKSYVSMFKLKKLQPEISRIKELYKTDDV-RIG 414 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 K + L++ H ++P++G PIL+QIPVFFA+YKV+ +++EMRHAP WI+DL++ D N Sbjct: 415 KEISSLFRKHGVSPVSGFLPILVQIPVFFALYKVLFVTIEMRHAPLCAWIQDLSSQDTAN 474 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVF 529 + LFG+L F P + +G+ PII+ ++M +Q K++ D I+ ++P VFVF Sbjct: 475 LLNLFGLLQFDPP--VCIGVLPIILGVTMVLQQKLNQQDQAAHDPY--GIMKFLPYVFVF 530 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 SSFPAGL++YW SNVI+I+QQ + + L++ Sbjct: 531 IFSSFPAGLVLYWICSNVITILQQLFVRRFIFDRRDLVNN 570 >gi|325275325|ref|ZP_08141278.1| membrane protein insertase [Pseudomonas sp. TJI-51] gi|324099573|gb|EGB97466.1| membrane protein insertase [Pseudomonas sp. TJI-51] Length = 560 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 143/582 (24%), Positives = 244/582 (41%), Gaps = 49/582 (8%) Query: 1 MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQ----------TVKQPNQ 48 M+ +A +S ++V W + Y + N + Sbjct: 1 MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASAD 60 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 V ++ A + A + +K L +I+ G LNL Y Sbjct: 61 VPSANADSSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPDIPF 120 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNAN 164 L + + Y A+ + ++ +L F + Sbjct: 121 QLF-DNGGERVYLAQSGLTGANGPDARASGRPLYAAEQKSYQLADGQQQLVVDLKFSDNG 179 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGF 220 +R Y + + N S + ++ R +++ G Sbjct: 180 VNYIKRFSFKRGEYDLNVSYLIDNQSSQPWSGNMFAQLKRDASGDPSSSTATGTATYLGA 239 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + D++K ++ S W+ Y+ + +IP+K + Q + D Sbjct: 240 ALWTASEPYKKVSMKDMDKGNLKEN-VSGGWVAWLQHYFVTAWIPAKSDNNVVQTR--KD 296 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y ++ + + G + T+ L+AG K + P E+ +D+G+ + Sbjct: 297 SQGNYIIGYTGPALNVPAGGKVETSAMLYAGPKIQSKLKELS-----PGLELTVDYGFLW 351 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 352 FIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALK 411 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ Sbjct: 412 ERFGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWML 470 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 471 WITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAKVM 511 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 512 KMMPIIFTFFFLWFPAGLVLYWVVNNCLSISQQWYITRRIEA 553 >gi|107104669|ref|ZP_01368587.1| hypothetical protein PaerPA_01005748 [Pseudomonas aeruginosa PACS2] Length = 578 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 140/602 (23%), Positives = 242/602 (40%), Gaps = 69/602 (11%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + + +S ++V W Y P + + Q + + + V Sbjct: 1 MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMNTTQGLPDTPSASGTSSDVPT 60 Query: 59 DDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + A S + +++K L +I+ +G L L Y + Sbjct: 61 AQSSAAGSEAADKPVAVSGKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFP 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANN 165 L + + Y A+ +++ +L F + Sbjct: 121 LF-DNGRERTYLAQSGLTGADGPDASSAGRPLFHSAQSSYQLADGQNELVVDLSFSHDGV 179 Query: 166 ILFERTIS---------------------LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR 204 +R + Y + + N S + ++ R Sbjct: 180 NYIKRFTFHRGLKADCSDKEKAQKKIECINENAYQVGVSYLIDNQSGKTWSGNLFAQLKR 239 Query: 205 HKPQTATNT----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWA 260 ++T G D + D++K W+ Y+ Sbjct: 240 DGSADPSSTTATGVSTYLGAAVWTPDSPYKKISTKDMDKEQFKE-SVQGGWVAWLQHYFV 298 Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 + ++P+K + DG Y F+ +++ G + T L+AG K + Sbjct: 299 TAWVPTKGEQHQVMTR--KDGQGNYIVGFTGPTLSVPAGSKVETDLTLYAGPKLQKHLKE 356 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 P E+ +D+G+ +FIA+P+F L+ + ++L+GN+G +I+ TV +KL FFPL+ Sbjct: 357 LS-----PGLELTVDYGFLWFIAQPIFWLLQHIHSLIGNWGWSIIALTVLIKLAFFPLSA 411 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 Y S A M+ + PK+ ++E+ Q + +AM++LYK INPL GC PIL+Q+PVF Sbjct: 412 ASYRSMARMRAVSPKMQAIKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVF 470 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 ++Y V+ S+EMR AP+ GWI DL+ DP I PI+M + Sbjct: 471 LSLYWVLLESVEMRQAPWLGWITDLSVKDPFF-------------------ILPIVMGGT 511 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 M IQ ++P P D QA ++ MP++F F FPAGL++YW +N +SI QQ I + Sbjct: 512 MLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKI 571 Query: 561 GA 562 A Sbjct: 572 EA 573 >gi|222475049|ref|YP_002563464.1| 60kD inner-membrane protein (yidC) [Anaplasma marginale str. Florida] gi|255004151|ref|ZP_05278952.1| putative inner membrane protein translocase component YidC [Anaplasma marginale str. Virginia] gi|56387916|gb|AAV86503.1| 60 kD inner-membrane protein [Anaplasma marginale str. St. Maries] gi|222419185|gb|ACM49208.1| 60kD inner-membrane protein (yidC) [Anaplasma marginale str. Florida] Length = 647 Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats. Identities = 192/579 (33%), Positives = 317/579 (54%), Gaps = 19/579 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ SV ++ W+ Y ++E +++ V + + + Sbjct: 76 MSEARNLVLAVVASVAVMVGWRFVYERVLVKEYPQQQRE---VVSESLIPEAMDVAEYRP 132 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 R A++ PRV L N S+ SI+LKGA DD++L Y + +S V L+SP T+ Sbjct: 133 RVDAINSVPRVRLGNTSVRASISLKGALVDDVSLTKYQVSTDKHSENVVLMSPEGTREDS 192 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E ++ + ++P+ NT+W + G + L + N ++F S+D Y+F Sbjct: 193 IVEFGWIDPEHKTKVPDKNTLWEVEQGSEASGEGSATLRWDNGQGLVFRLRFSIDRAYMF 252 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + V N++ + +R S GRI + Q + + EG I G L E Y D++K Sbjct: 253 SVSQEVENSTGEDLRLSYYGRINKAHAQDGKSYWISHEGAIGSFGH-GLQEWTYKDMQKG 311 Query: 241 SISNFHESN-----SWLGISDKYWASVFIPSKET-SFHSQFKYLS-DGHARYQAKFSANE 293 S + +N W+G++DKYW + +PS + + K++ + +Q FS + Sbjct: 312 SGARVGATNEGTGSHWIGLADKYWFTALVPSSDKGKLAFRAKHVPRNDVDHFQVDFSRSY 371 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 TI G +T LF GAKE + +Y L IP F+ +D+G YFI KP+F L+ YF Sbjct: 372 GTIPAGGKAESTTQLFIGAKELAVLDNYRSGLNIPLFDKAVDFGVLYFITKPVFQLLQYF 431 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + +VGNFG+AI++ T+ +KL+ FPL+ K YVS +K +QP+I +RE ++ + K Sbjct: 432 HKVVGNFGLAIVMLTIAIKLVVFPLSSKSYVSMFKLKKLQPEISRIRE-LHKTDDVRISK 490 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 + L++ H ++P++G PIL+QIPVFFA+YKV+ +++EMRHAP + WI+DL++ D N+ Sbjct: 491 EISALFRKHGVSPMSGFLPILVQIPVFFALYKVLFVTIEMRHAPLFAWIQDLSSHDTANL 550 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFA 530 LFG+L F P + VG+ PII+ ++M +Q K++ D ++ ++P VFVF Sbjct: 551 LNLFGLLRFEPP--ICVGVLPIILGITMVLQQKINQQDQATQDPY--GVMKFLPYVFVFI 606 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 SSFPAGL++YW SNVI+++QQ + + L++ Sbjct: 607 FSSFPAGLVLYWICSNVITMLQQLFVRRFIFDRRDLVNN 645 >gi|116053719|ref|YP_794046.1| putative inner membrane protein translocase component YidC [Pseudomonas aeruginosa UCBPP-PA14] gi|218894670|ref|YP_002443540.1| putative inner membrane protein translocase component YidC [Pseudomonas aeruginosa LESB58] gi|296392435|ref|ZP_06881910.1| putative inner membrane protein translocase component YidC [Pseudomonas aeruginosa PAb1] gi|313111480|ref|ZP_07797281.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa 39016] gi|122256261|sp|Q02DE0|OXAA_PSEAB RecName: Full=Inner membrane protein oxaA gi|254773013|sp|B7V7A5|OXAA_PSEA8 RecName: Full=Inner membrane protein oxaA gi|115588940|gb|ABJ14955.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa UCBPP-PA14] gi|218774899|emb|CAW30718.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa LESB58] gi|310883783|gb|EFQ42377.1| putative inner membrane protein, 60 kDa [Pseudomonas aeruginosa 39016] Length = 578 Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats. Identities = 140/602 (23%), Positives = 242/602 (40%), Gaps = 69/602 (11%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + + +S ++V W Y P + + Q + + + V Sbjct: 1 MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMNTTQGLPDTPSASGTSSDVPT 60 Query: 59 DDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + A S + +++K L +I+ +G L L Y + Sbjct: 61 AQSSAAGSEAADKPVAVSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFP 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANN 165 L + + Y A+ +++ +L F + Sbjct: 121 LF-DNGRERTYLAQSGLTGADGPDASSAGRPLFHSAQSSYQLADGQNELVVDLSFSHDGV 179 Query: 166 ILFERTIS---------------------LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR 204 +R + Y + + N S + ++ R Sbjct: 180 NYIKRFTFHRGLKADCSDKEKAQKKIECINENAYQVGVSYLIDNQSGKTWSGNLFAQLKR 239 Query: 205 HKPQTATNT----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWA 260 ++T G D + D++K W+ Y+ Sbjct: 240 DGSADPSSTTATGVSTYLGAAVWTPDSPYKKISTKDMDKEQFKE-SVQGGWVAWLQHYFV 298 Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 + ++P+K + DG Y F+ +++ G + T L+AG K + Sbjct: 299 TAWVPTKGEQHQVMTR--KDGQGNYIVGFTGPTLSVPAGSKVETDLTLYAGPKLQKHLKE 356 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 P E+ +D+G+ +FIA+P+F L+ + ++L+GN+G +I+ TV +KL FFPL+ Sbjct: 357 LS-----PGLELTVDYGFLWFIAQPIFWLLQHIHSLIGNWGWSIIALTVLIKLAFFPLSA 411 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 Y S A M+ + PK+ ++E+ Q + +AM++LYK INPL GC PIL+Q+PVF Sbjct: 412 ASYRSMARMRAVSPKMQAIKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVF 470 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 ++Y V+ S+EMR AP+ GWI DL+ DP I PI+M + Sbjct: 471 LSLYWVLLESVEMRQAPWLGWITDLSVKDPFF-------------------ILPIVMGGT 511 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 M IQ ++P P D QA ++ MP++F F FPAGL++YW +N +SI QQ I + Sbjct: 512 MLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKI 571 Query: 561 GA 562 A Sbjct: 572 EA 573 >gi|56477030|ref|YP_158619.1| preprotein translocase subunit yidC [Aromatoleum aromaticum EbN1] gi|81677486|sp|Q5P4P4|OXAA_AZOSE RecName: Full=Inner membrane protein oxaA gi|56313073|emb|CAI07718.1| preprotein translocase subunit yidC [Aromatoleum aromaticum EbN1] Length = 550 Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats. Identities = 140/578 (24%), Positives = 248/578 (42%), Gaps = 44/578 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT-----VKQPNQVDNSYAAV 56 + + S+ +V W + + + AV Sbjct: 1 MDQRRLVLFLVFSLSLVMLWNAWLKQSQPAPTAVTATAGVEGAGVPTPTTGVAPGATTAV 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 A S +PR+ ++ ++ ++ +G L L + V L T Sbjct: 61 PGVPGAATASTAPRMVVRTDLMVAEVSAQGGDIVRLELAQHKATADKTKNFV--LFDDGT 118 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD- 175 + Y A+ + K ++L + + + ++ Sbjct: 119 IHLYAAQSGLIGEDLPTHKTTFALPQGEQVLKEGEDRLVVRLEAPEQDGVKVTKVMTFHR 178 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT---FGVQEGFIAVLGDKSLVEQ 232 +YL + + N+S + ++ R + G + + Sbjct: 179 GNYLVDVAYEIVNSSERTLSPHAYYQLTRDGKPAESVEAFGVTTFTGPAFYTDAEKFQKV 238 Query: 233 KYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 ++ +I + + S+ W+ + Y+ S ++P T +F G+ Y A Sbjct: 239 QFEEIAEGKAKFVKKASDGWIAMVQHYFVSAWLPQGGTER--EFFAQKVGNDLYSAGVIV 296 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I PG+S L+AG +E + P ++++D+GW IA P+F ++S Sbjct: 297 PVAAIQPGQSGRVEASLYAGPQEQDKLEDIA-----PGLDLVVDYGWLTVIAAPLFWVLS 351 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + +VGN+G AI++ T+ +KL+FFPL+ Y S A M+ + P++ L+E + ++ Sbjct: 352 WIHGVVGNWGWAIIIVTILIKLMFFPLSAASYKSMAKMRVLGPRMQRLKELYGNDKAKM- 410 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ M+++Y+ INPL GC PIL+QIPVF ++Y V+ S+EMR AP+ GWI+DL+A DP Sbjct: 411 QQEMMEMYRKEKINPLGGCLPILVQIPVFISLYWVLLGSVEMRQAPWLGWIQDLSAKDPY 470 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 I P+IM +SM IQMK++P P D QA ++ MPV+F F Sbjct: 471 F-------------------ILPVIMGVSMLIQMKLNPTPPDPIQAKVMMAMPVIFTFMF 511 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK-----MHGAEI 564 FP+GL++YW +N++SI QQ I + GA+ Sbjct: 512 LWFPSGLVLYWVVNNILSIAQQWQITRMIESEKSGAKP 549 >gi|255003028|ref|ZP_05277992.1| putative inner membrane protein translocase component YidC [Anaplasma marginale str. Puerto Rico] Length = 647 Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats. Identities = 192/579 (33%), Positives = 317/579 (54%), Gaps = 19/579 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ SV ++ W+ Y ++E +++ V + + + Sbjct: 76 MSEARNLVLAVVASVAVMVGWRFVYERVLVKEYPQQQRE---VVSESLIPEAMDVAEYRP 132 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 R A++ PRV L N S+ SI+LKGA DD++L Y + +S V L+SP T+ Sbjct: 133 RVDAINSVPRVRLGNTSVRASISLKGALVDDVSLTKYQVSTDKHSENVVLMSPEGTREDS 192 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E ++ + ++P+ NT+W + G + L + N ++F S+D Y+F Sbjct: 193 IVEFGWIDPEHKTKVPDKNTLWEVEQGSEASGEGSATLRWDNGQGLVFRLRFSIDRAYMF 252 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + V N++ + +R S GRI + Q + + EG I G L E Y D++K Sbjct: 253 SVSQEVENSTGEDLRLSYYGRINKAHAQDGKSYWISHEGAIGSFGH-GLQEWTYKDMQKG 311 Query: 241 SISNFHESN-----SWLGISDKYWASVFIPSKET-SFHSQFKYLS-DGHARYQAKFSANE 293 S + +N W+G++DKYW + +PS + + K++ + +Q FS + Sbjct: 312 SGARVGATNEGTGSHWIGLADKYWFTALVPSSDKGKLAFRAKHVPRNDVDHFQVDFSRSY 371 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 TI G +T LF GAKE + +Y L IP F+ +D+G YFI KP+F L+ YF Sbjct: 372 GTIPAGGKAESTTQLFIGAKELAVLDNYRSGLNIPLFDKAVDFGVLYFITKPVFQLLQYF 431 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + +VGNFG+AI++ T+ +KL+ FPL+ K YVS +K +QP+I +RE ++ + K Sbjct: 432 HKVVGNFGLAIVMLTIAIKLVVFPLSSKSYVSMFKLKKLQPEISRIRE-LHKTDDVRISK 490 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 + L++ H ++P++G PIL+QIPVFFA+YKV+ +++EMRHAP + WI+DL++ D N+ Sbjct: 491 EISALFRKHGVSPMSGFLPILVQIPVFFALYKVLFVTIEMRHAPLFAWIQDLSSHDTANL 550 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFA 530 LFG+L F P + VG+ PII+ ++M +Q K++ D ++ ++P VFVF Sbjct: 551 LNLFGLLRFEPP--ICVGVLPIILGITMVLQQKINQQDQATQDPY--GVMKFLPYVFVFI 606 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 SSFPAGL++YW SNVI+++QQ + + L++ Sbjct: 607 FSSFPAGLVLYWICSNVITMLQQLFVRRFIFDRRDLVNN 645 >gi|15600761|ref|NP_254255.1| inner membrane protein translocase component YidC [Pseudomonas aeruginosa PAO1] gi|38503188|sp|Q9HT06|OXAA_PSEAE RecName: Full=Inner membrane protein oxaA gi|9951909|gb|AAG08953.1|AE004968_7 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 578 Score = 361 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 140/602 (23%), Positives = 241/602 (40%), Gaps = 69/602 (11%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + + +S ++V W Y P + + Q + + + V Sbjct: 1 MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMNTTQGLPDTPSASGTSSDVPT 60 Query: 59 DDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + A S + +++K L +I+ +G L L Y + Sbjct: 61 AQSSAAGSEAADKPVAVSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFP 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANN 165 L + + Y A+ ++ +L F + Sbjct: 121 LF-DNGRERTYLAQSGLTGADGPDASSAGRPLFRSAQSSYQLADGQNELVVDLSFSHDGV 179 Query: 166 ILFERTIS---------------------LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR 204 +R + Y + + N S + ++ R Sbjct: 180 NYIKRFTFHRGLKADCSDKEKAQKKIECINENAYQVGVSYLIDNQSGKTWSGNLFAQLKR 239 Query: 205 HKPQTATNT----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWA 260 ++T G D + D++K W+ Y+ Sbjct: 240 DGSADPSSTTATGVSTYLGAAVWTPDSPYKKISTKDMDKEQFKE-SVQGGWVAWLQHYFV 298 Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 + ++P+K + DG Y F+ +++ G + T L+AG K + Sbjct: 299 TAWVPTKGEQHQVMTR--KDGQGNYIVGFTGPTLSVPAGSKVETDLTLYAGPKLQKHLKE 356 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 P E+ +D+G+ +FIA+P+F L+ + ++L+GN+G +I+ TV +KL FFPL+ Sbjct: 357 LS-----PGLELTVDYGFLWFIAQPIFWLLQHIHSLIGNWGWSIIALTVLIKLAFFPLSA 411 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 Y S A M+ + PK+ ++E+ Q + +AM++LYK INPL GC PIL+Q+PVF Sbjct: 412 ASYRSMARMRAVSPKMQAIKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVF 470 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 ++Y V+ S+EMR AP+ GWI DL+ DP I PI+M + Sbjct: 471 LSLYWVLLESVEMRQAPWLGWITDLSVKDPFF-------------------ILPIVMGGT 511 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 M IQ ++P P D QA ++ MP++F F FPAGL++YW +N +SI QQ I + Sbjct: 512 MLIQQMLNPTPPDPMQAKVMKLMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKI 571 Query: 561 GA 562 A Sbjct: 572 EA 573 >gi|58040258|ref|YP_192222.1| putative inner membrane protein translocase component YidC [Gluconobacter oxydans 621H] gi|58002672|gb|AAW61566.1| 60 kD inner membrane protein OxaA [Gluconobacter oxydans 621H] Length = 575 Score = 361 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 180/575 (31%), Positives = 293/575 (50%), Gaps = 13/575 (2%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 A LS +I+ + F P ++ + Q + + Sbjct: 1 MDTKRIIAATLLSALILIGFDYFMPKPHQDDPHPVTHAPAAQVQNSAPTTAAPPAEAATE 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 QA + R+ + P + GS+NLKGA DDL L Y ++ +SP+V LL + + + F Sbjct: 61 TQA--TARRIPVTGPDVQGSLNLKGAVLDDLILMKYRETLAKDSPLVRLLDKAGSAHPTF 118 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 + + + + S + LTP P+ L + N ++F I+LDEHY+F Sbjct: 119 VVIGWTNAPGSNARLPDLNTVWESSDETLTPDHPVTLHWDNGQGLVFSIQIALDEHYMFA 178 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 + TV N+S + P R+ R + + G K Sbjct: 179 VSQTVENHSGQPVALVPFERVQRDYDAPEGAFTAHEGPIAVIGGRMQDESYKNLRKGADH 238 Query: 242 ISNF----HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF-SANEITI 296 + +N W GISDK+W + P+ T + F Y+ YQ + N I Sbjct: 239 PDHVSWSSTGTNGWDGISDKFWLTAVAPADGTPVAASFAYVPGTPGSYQVGMSTQNAQQI 298 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 +P SIT + +FAGAK + Y K L IP + ID+GWF F+ +P+ L+ + Y Sbjct: 299 MPNGSITEKSHVFAGAKVVSLLQGYSKQLGIPDLDKAIDFGWFSFLTRPLLTLLHWLYLH 358 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GNFG+A+M T+ VK++ FPLA K S+A M+ + PK+ E+REK K P + + ++ Sbjct: 359 LGNFGLALMALTLIVKIVLFPLASKAAQSSARMRLLAPKVKEIREKNKD-DPMAMNQKVM 417 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LY+ ++P +GC P+L+Q P+FF +YK+++IS++ RHAPF+GWI DL+ DPTN+F L Sbjct: 418 ALYREEKVSPASGCLPMLIQAPIFFCLYKILNISIDARHAPFFGWIHDLSMPDPTNVFNL 477 Query: 477 FGILPFYL---PGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFAL 531 FG+LPF F+HV IW + L+ ++ + + A D QA ++ +MP+V+VF + Sbjct: 478 FGLLPFDPTHYSSFLHVSIWGTALGLTFWLLQRQTSSTASLDPAQARMMQFMPLVYVFFM 537 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 S FPA L++Y++W+N++++ QQ I + G + + Sbjct: 538 SGFPASLLVYYTWNNLLTVAQQMFIQRRTGLPVPV 572 >gi|121998020|ref|YP_001002807.1| 60 kDa inner membrane insertion protein [Halorhodospira halophila SL1] gi|166975869|sp|A1WWE3|OXAA_HALHL RecName: Full=Inner membrane protein oxaA gi|121589425|gb|ABM62005.1| protein translocase subunit yidC [Halorhodospira halophila SL1] Length = 550 Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats. Identities = 149/568 (26%), Positives = 256/568 (45%), Gaps = 36/568 (6%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME + IAL S+++ +AW+ + P E + E+++ + P+ + Sbjct: 1 MENQR-LILLIALAGISLLLYFAWEREQMDPA-EPVVEEQESEVDQEAPDAPSRAEEPDA 58 Query: 58 IDDRAQAL-----SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 D A+ + + RV +K + I+ +G L+L + +P L Sbjct: 59 GDPMAEGVVDPDDEDAKRVRVKTDLIEAEISTQGGDIRQLDLLKHQKASDDPTPYRLLRD 118 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 A L A + + T + L+++ + + Sbjct: 119 EGEPLFVAQAGLGGDGPAPGRDARYEVDQDEFELAEGE-DTLEVPLIWEEDGVKVRKVYT 177 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA--VLGDKSLV 230 + YL + V NN+ D ++ R T + + + Sbjct: 178 FRRDSYLVDVRHEVENNAEDDWAGFQYVQLRRRPDPAGTTPWYIHSFTGGSLYTQEDRFS 237 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 +SD+E S +S E + W + Y+ V IP + ++ + L Y S Sbjct: 238 RISFSDMEDSDLSQ-DERDGWAAMLQHYFLGVMIPERGETYRYYTRALP--QETYLLGMS 294 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + + + G+S TN LF G KE + L + + +D+G+ +A P+F + Sbjct: 295 SPWLQVAAGESGQKTNHLFVGPKEQDRLTAVGSALDVDDLRLTVDYGFLTILANPLFWAL 354 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 NLV N+G+AI++ T+ +K+ F+ L+ Y S A M+ +QPK+ ++RE++ Q+ Sbjct: 355 DQIENLVKNWGVAILILTLLIKIAFYKLSAISYRSMAKMRKVQPKMQQIRERYSDDRQQM 414 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 +A+++LYK INPL GC PIL+QIPVF A+Y V+ S+E+RHAPF WI+DL++ DP Sbjct: 415 -NQALMELYKKEKINPLGGCLPILVQIPVFIALYWVLVESVELRHAPFMLWIQDLSSRDP 473 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I P++M SM +QMK++PPP D Q ++ +P VF Sbjct: 474 YF-------------------ILPLLMGASMLVQMKLNPPPMDPIQKRVMQVLPFVFTGF 514 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N++SI QQ I++ Sbjct: 515 FMLFPAGLVLYWLTNNILSIAQQWYILR 542 >gi|260912766|ref|ZP_05919252.1| YidC/Oxa1 family membrane protein insertase [Pasteurella dagmatis ATCC 43325] gi|260633144|gb|EEX51309.1| YidC/Oxa1 family membrane protein insertase [Pasteurella dagmatis ATCC 43325] Length = 541 Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats. Identities = 150/570 (26%), Positives = 254/570 (44%), Gaps = 43/570 (7%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + + +S ++ WQ Y P+ + VK + V S + Sbjct: 1 MDSRRSLLVIALLFISFLVYQQWQLDYHTPKPV-------VTEQVKVSSDVPASSTSSTS 53 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + L+N L ++ G L + ++ SN+P L + N + Sbjct: 54 DIATTAQIQGRVITLENDVLRLKVDTLGGDVIHSELLKHDAELDSNTPFTLLTNKQN--H 111 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILFERTISLD 175 Y A+ V I+ + + +LV + + F + L Sbjct: 112 VYIAQSGLVGKDG-IDTKAGRASYQVEGDAFKLAEGQNELVVPLVFEKDGVTFRKVFVLK 170 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 + Y + + N S I P G++ + N A ++ ++ Sbjct: 171 RNAYDISVNFEIDNQSEKAIEVEPYGQLRHTLVEDTGNVAMPTYTGGAYSSSETNYKKYS 230 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D + + W+ + Y+ S +IP+++ + + + Sbjct: 231 FDEMQKANLAVSTKAGWVAVLQHYFVSAWIPNQDADNQL-YSLTDKANNLASIGYRGPTT 289 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I G T T+ L+ G K + ++ +D+GW +FIAKP+F L+++ Sbjct: 290 VISAGAKETITSSLWTGPKLQDQMAAVAN-----HLDLTVDYGWAWFIAKPLFWLLTFIQ 344 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + Sbjct: 345 SIVHNWGLAIIGVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERF-GEDRQRMSQE 403 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 404 MMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY-- 461 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I PI+M SMF+ KMSP P AD Q I+N+MP++F+ Sbjct: 462 -----------------ILPILMGASMFLLQKMSPTPVADPMQQKIMNFMPLIFMVFFLW 504 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+I+I QQ +I + + Sbjct: 505 FPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|262166780|ref|ZP_06034517.1| OxaI/YidC membrane insertion protein [Vibrio mimicus VM223] gi|262026496|gb|EEY45164.1| OxaI/YidC membrane insertion protein [Vibrio mimicus VM223] Length = 541 Score = 360 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 142/570 (24%), Positives = 249/570 (43%), Gaps = 41/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A++ + + + + L SI+ G L Y ++ S+ P V L + + + Sbjct: 60 ---AVAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYSEELDSSEPFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ + I Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVNADSFSLAEGQDELRIPMTYQANGIDYTKTFILKRG 174 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y +V V NNS + + ++ + N G D + + Sbjct: 175 SYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234 Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S + +W+ + Y+AS +IP E + +++ Sbjct: 235 DMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAAVA-----PNLDLVVDYGWLWFIAKPLHWLLSFIQ 346 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 347 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|262172772|ref|ZP_06040450.1| OxaI/YidC membrane insertion protein [Vibrio mimicus MB-451] gi|261893848|gb|EEY39834.1| OxaI/YidC membrane insertion protein [Vibrio mimicus MB-451] Length = 541 Score = 360 bits (922), Expect = 5e-97, Method: Composition-based stats. Identities = 142/570 (24%), Positives = 248/570 (43%), Gaps = 41/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + + + + L SI+ G L Y ++ S+ P V L + + + Sbjct: 60 ---AAAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYSEELDSSEPFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ + I Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVNADSFSLAEGQDELRIPMTYQANGIDYTKTFILKRG 174 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y +V V NNS + + ++ + N G D + + Sbjct: 175 SYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234 Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S + +W+ + Y+AS +IP E + +++ Sbjct: 235 DMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAAVA-----PNLDLVVDYGWLWFIAKPLHWLLSFIQ 346 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 347 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|330831724|ref|YP_004394676.1| inner membrane protein oxaA [Aeromonas veronii B565] gi|328806860|gb|AEB52059.1| Inner membrane protein oxaA [Aeromonas veronii B565] Length = 548 Score = 359 bits (921), Expect = 6e-97, Method: Composition-based stats. Identities = 138/573 (24%), Positives = 245/573 (42%), Gaps = 41/573 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + QT + + + + Sbjct: 1 MESQRNLLL-IGLLFVSFLLWQQW--ESDKAPKPAPTTVAQTEHFVPEAGQTGDIPQVSE 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +A A + + + + L +++ +G L + L+ + P V L S ++ Y Sbjct: 58 QANATAARKLITVSSDVLKLTLDTQGGDVVSAELLSHKLEEGKDQPFVLL--TSKPEHLY 115 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175 A+ V + + + + ++ ++F + L Sbjct: 116 IAQSGLVGRNGPDSQAEGRPTYEAAQTSYQLADGQDQVVVPMTWTDSKGVVFTKEFILKR 175 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + + N S + ++ G++ + G S + +Y Sbjct: 176 GDYAVGVDYKIDNKSAEPVQVQFYGQLKQTVATPKDQEGHAMVASAYRGGAFSTEDTRYK 235 Query: 236 DIEKSSISNFHESN----SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + + + W+ + Y+ S + P+ + +S + + G + + A Sbjct: 236 KYTFDEMKDADLNKTTKGGWVAMLQHYFVSAWAPNAD-DTNSFYSRVIPGKGQAIIGYKA 294 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + + G+ T+ L+ G K + ++ +D+GW +FIA+P+ L++ Sbjct: 295 PLVDVAAGQQAEVTSKLWVGPKLQDQMAKVAN-----HLDLTVDYGWLWFIAQPLHWLLT 349 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 F+ V N+G+AI++ T+ V+ + FPL K QY S A M+ +QPKI LRE+F Q + Sbjct: 350 VFHGFVQNWGLAIIMLTLLVRGIMFPLTKAQYTSMAKMRMLQPKIAALRERFGD-DRQKM 408 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + M++LYK +NPL GC PIL+Q+P+F A+Y + S+E+RHAPF WI DL+ DP Sbjct: 409 SQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWALMESVELRHAPFALWITDLSVKDPF 468 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 + PI+M SM+ KMSP D Q ++ +MP++F F Sbjct: 469 F-------------------VLPILMGASMWYLQKMSPTTVTDPMQQKVMQFMPIIFTFM 509 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL +YW SNVISI+QQ +I + + Sbjct: 510 FLWFPAGLTLYWLVSNVISIIQQTIIYRQLEKK 542 >gi|262402088|ref|ZP_06078652.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC586] gi|262351734|gb|EEZ00866.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC586] Length = 541 Score = 359 bits (921), Expect = 6e-97, Method: Composition-based stats. Identities = 142/570 (24%), Positives = 248/570 (43%), Gaps = 41/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPTPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + + + + L SI+ G L Y ++ S+ P V L + + + Sbjct: 60 ---AAAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYSEELDSSEPFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ + I Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVNADSFSLAEGQDELRIPMTYQANGIEYTKTFILKRG 174 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y +V V NNS + + ++ + N G D + + Sbjct: 175 SYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234 Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S + +W+ + Y+AS +IP E + +++ Sbjct: 235 DMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAAVA-----PNLDLVVDYGWLWFIAKPLHWLLSFIQ 346 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 347 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|161544990|ref|YP_153758.2| putative inner membrane protein translocase component YidC [Anaplasma marginale str. St. Maries] Length = 572 Score = 359 bits (921), Expect = 7e-97, Method: Composition-based stats. Identities = 192/579 (33%), Positives = 317/579 (54%), Gaps = 19/579 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ SV ++ W+ Y ++E +++ V + + + Sbjct: 1 MSEARNLVLAVVASVAVMVGWRFVYERVLVKEYPQQQRE---VVSESLIPEAMDVAEYRP 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 R A++ PRV L N S+ SI+LKGA DD++L Y + +S V L+SP T+ Sbjct: 58 RVDAINSVPRVRLGNTSVRASISLKGALVDDVSLTKYQVSTDKHSENVVLMSPEGTREDS 117 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E ++ + ++P+ NT+W + G + L + N ++F S+D Y+F Sbjct: 118 IVEFGWIDPEHKTKVPDKNTLWEVEQGSEASGEGSATLRWDNGQGLVFRLRFSIDRAYMF 177 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + V N++ + +R S GRI + Q + + EG I G L E Y D++K Sbjct: 178 SVSQEVENSTGEDLRLSYYGRINKAHAQDGKSYWISHEGAIGSFGH-GLQEWTYKDMQKG 236 Query: 241 SISNFHESN-----SWLGISDKYWASVFIPSKET-SFHSQFKYLS-DGHARYQAKFSANE 293 S + +N W+G++DKYW + +PS + + K++ + +Q FS + Sbjct: 237 SGARVGATNEGTGSHWIGLADKYWFTALVPSSDKGKLAFRAKHVPRNDVDHFQVDFSRSY 296 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 TI G +T LF GAKE + +Y L IP F+ +D+G YFI KP+F L+ YF Sbjct: 297 GTIPAGGKAESTTQLFIGAKELAVLDNYRSGLNIPLFDKAVDFGVLYFITKPVFQLLQYF 356 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + +VGNFG+AI++ T+ +KL+ FPL+ K YVS +K +QP+I +RE ++ + K Sbjct: 357 HKVVGNFGLAIVMLTIAIKLVVFPLSSKSYVSMFKLKKLQPEISRIRE-LHKTDDVRISK 415 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 + L++ H ++P++G PIL+QIPVFFA+YKV+ +++EMRHAP + WI+DL++ D N+ Sbjct: 416 EISALFRKHGVSPMSGFLPILVQIPVFFALYKVLFVTIEMRHAPLFAWIQDLSSHDTANL 475 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFA 530 LFG+L F P + VG+ PII+ ++M +Q K++ D ++ ++P VFVF Sbjct: 476 LNLFGLLRFEPP--ICVGVLPIILGITMVLQQKINQQDQATQDPY--GVMKFLPYVFVFI 531 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 SSFPAGL++YW SNVI+++QQ + + L++ Sbjct: 532 FSSFPAGLVLYWICSNVITMLQQLFVRRFIFDRRDLVNN 570 >gi|261856984|ref|YP_003264267.1| membrane protein insertase, YidC/Oxa1 family domain containing [Halothiobacillus neapolitanus c2] gi|261837453|gb|ACX97220.1| membrane protein insertase, YidC/Oxa1 family domain containing [Halothiobacillus neapolitanus c2] Length = 570 Score = 359 bits (920), Expect = 1e-96, Method: Composition-based stats. Identities = 154/596 (25%), Positives = 253/596 (42%), Gaps = 57/596 (9%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFY-----------------VYPRIEEMNNERKNIQTVK 44 N + +AL +++ WQ + P K+I Sbjct: 1 MDNRRLILVVALGFVLISLWQAWTHDQSQSAQQTAATLQNAASPDSPAQPTAAKDIPATS 60 Query: 45 QPNQVDNSYAAVLIDDRAQALSMS-PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 P+ +AV A+ S + + +K L I+L+G D+ +L Y + Sbjct: 61 APSASGQDQSAVPGGSAAKPTSKAAQTITVKTDVLALKISLQGGVIDEADLLKYPQEQDK 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP---TTPIKLVF 160 P V LL+ SN Y A+ + + LTP I L + Sbjct: 121 ADP-VRLLTDSNG-FVYVAQSGLIGEKGAPAPDHYAQYTAPQMEYTLTPGENELRIPLTW 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + + + I Y ++ + N S S ++ R T G Sbjct: 179 EKDGIKITKLIIIKRGDYTVQVEYKIDNTSQSPWAASQYRQLTRLGTTPGTQLVHTYTGT 238 Query: 221 I------AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH-- 272 + + + + ++ K+ +S S+ W+ I Y+ S ++PS + Sbjct: 239 VYAGDVPGTKDRLAYEKIPFEEMLKTKLSK-DLSSGWVAIIQHYFMSAWVPSDRQQVNHF 297 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + Y S+ TI G S ++ L+ G K + + + Sbjct: 298 YTLVSDKNNQTLYTIGMSSPVTTIPAGGSGELSSTLYVGPKIQANLAPLAQ-----GLNL 352 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 ID+G F IA P+F L+ +F+ VGN+G +I+L T+ +KL F + Y S A M+ + Sbjct: 353 TIDFGIFTVIADPIFWLLKHFHEWVGNWGWSIVLVTLVIKLFFLWPSAISYRSMAKMRAV 412 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PK+ L+EKF Q L + M++LY+ INPL GC PI++QIPVF ++Y V++ S+E Sbjct: 413 TPKMKALKEKF-GEDRQKLSQEMMKLYQREKINPLGGCLPIVIQIPVFISLYWVLAESVE 471 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +R AP+ WI DL+ DP + P++M +SMFIQ K++P P Sbjct: 472 LRQAPWILWIHDLSQKDPYF-------------------VLPLLMGISMFIQQKLNPAPV 512 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 D Q I W+PV+F S FPAGL++YW +N++SI QQ +I + ++ LI Sbjct: 513 DPMQQKIFAWLPVIFTIFFSFFPAGLVLYWFVNNLLSIAQQYMITRKIEKQMALIK 568 >gi|197333980|ref|YP_002154775.1| inner membrane protein OxaA [Vibrio fischeri MJ11] gi|197315470|gb|ACH64917.1| inner membrane protein OxaA [Vibrio fischeri MJ11] Length = 541 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 138/571 (24%), Positives = 240/571 (42%), Gaps = 43/571 (7%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N +A+AL S ++ WQ + ++ ++ P + + Sbjct: 1 MDTQRNILLLALALVSFLLFQQWQVETNPQQPATVSTVQQTQTDGDVP-----TSSTANS 55 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + + + L ++ G + L Y ++ S + V L ++ + Sbjct: 56 DTPADSAQSDKLITITTDVLTLKVDTLGGDIIESVLNKYDAELDSKAKFVLL--KNDATH 113 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVFKNANNILFERTISLD 175 +Y A+ + + + L + I Sbjct: 114 SYVAQSGLIGPQGIDSNSGRAQFTAQKTDYVLAEGQNELRVPLTLVKDGITYTKTLILKR 173 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKY 234 + Y + TV N S + ++ + T G D + + Sbjct: 174 DSYAIDVDYTVDNQSSAPATVEMYTNLKQNLMDDGGSLTMPTYRGAAYSTEDTRYKKYSF 233 Query: 235 SDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D+E ++S + W G+ Y+AS +IP + D Sbjct: 234 DDMEDKNLSIDMTNGQGWAGMLQHYFASAWIPRNVNDAKLTSRVAGD---YGYIGVRMPS 290 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 +TI G+ T + L+ G K + P ++ +D+GW +FIA P+ L+S+ Sbjct: 291 VTIPAGQEATLSATLWTGPKLQKEMAATA-----PYLDLTVDYGWLWFIASPLHKLLSFI 345 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 +V N+G+AI++ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 QGIVVNWGLAIIVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGD-DRQRMSQ 404 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYK +NPL GC PILLQ+P+F ++Y + S+E+RH PF+GWI DL+A DP Sbjct: 405 EMMELYKKEKVNPLGGCLPILLQMPIFISLYWALMESVELRHTPFFGWITDLSAQDPYY- 463 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 I P++M SMF+ KMSP D Q I+ +MPV+F Sbjct: 464 ------------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTVFFL 505 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + + Sbjct: 506 WFPSGLVLYWLVSNIVTLIQQTLIYRALEKK 536 >gi|145301204|ref|YP_001144045.1| 60 kDa inner membrane protein [Aeromonas salmonicida subsp. salmonicida A449] gi|166975848|sp|A4STS5|OXAA_AERS4 RecName: Full=Inner membrane protein oxaA gi|142853976|gb|ABO92297.1| 60 kDa inner membrane protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 548 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 136/573 (23%), Positives = 240/573 (41%), Gaps = 41/573 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + QT + + + + Sbjct: 1 MESQRNLIL-IGLLFVSFLLWQQW--ESDKAPKPAPTTVAQTEHFVPEAGQTGDIPQVSE 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +A A + + + + L +++ +G L + L+ + V L S Y Sbjct: 58 QANANAARKLITVSSDVLKLTLDTQGGDIVSAELLAHKLEEGKDQSFVLL--TSQPDRLY 115 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175 A+ V + + + + ++ ++F + L Sbjct: 116 VAQSGLVGRDGPDSQAQGRPTYEAAQTSYQLADGQDQVVVPMTWTDSKGVVFTKEFVLKR 175 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + + N S + ++ G++ + G S E +Y Sbjct: 176 GDYAIGVDYKIDNKSAEPVQVQFYGQLKQTVTTPKDQEGHAMVASAYRGGAFSSEESRYK 235 Query: 236 DIEKSSISNFHESN----SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + + + W+ + Y+ S + P+ + +S + + G + + A Sbjct: 236 KYTFDEMKDADLNKTTKGGWVAMLQHYFVSAWAPNAD-DTNSFYSRVIPGKDQAIIGYKA 294 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + + G+ T+ L+ G K + ++ +D+GW +FIA+P+ L++ Sbjct: 295 PLVDVAAGQQAEVTSKLWVGPKLQDQMAKVAN-----HLDLTVDYGWLWFIAQPLHWLLT 349 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 F V N+G+AI++ T+ V+ + FPL K QY S A M+ +QPK+ L+E+F Q + Sbjct: 350 VFQGFVHNWGVAIIMLTLLVRGIMFPLTKAQYTSMAKMRMLQPKLAALKERFSD-DRQKM 408 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + M++LYK +NPL GC PIL+Q+P+F A+Y + S+E+RHAPF WI DL+ DP Sbjct: 409 SQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWALMESVELRHAPFALWITDLSVKDPF 468 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 + PI+M SM+ KMSP D Q ++ +MP++F F Sbjct: 469 F-------------------VLPILMGASMWYLQKMSPTTITDPMQQKVMQFMPIIFTFM 509 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL +YW SNVISI QQ +I + + Sbjct: 510 FLWFPAGLTLYWLVSNVISITQQTIIYRQLEKK 542 >gi|329114454|ref|ZP_08243216.1| Inner membrane protein OxaA [Acetobacter pomorum DM001] gi|326696530|gb|EGE48209.1| Inner membrane protein OxaA [Acetobacter pomorum DM001] Length = 594 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 172/581 (29%), Positives = 302/581 (51%), Gaps = 18/581 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + +A LS ++++ + F+ ++ + + P + A Sbjct: 12 MDSKRLILATLLSALVLFGYDYFFPQHQLVPPAQQGVHAVAPPAPASSGAAAPAENTQAE 71 Query: 62 AQAL---SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A A RV + P++ G++NL+GA+ DDL L+ Y V +SP V +L+ ++T Sbjct: 72 AAAPVKDGPETRVAINAPAVQGTLNLRGARLDDLVLKHYRETVKPDSPDVRVLNSASTHA 131 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 Y + ++ LP++NT+W SG + P+ L + N + F+ +S+D++Y Sbjct: 132 DYVDFGWRAPSDVSVRLPDANTLWK-ASGTQMDAEHPLTLSWDNGQGLTFDIRLSVDQNY 190 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI----AVLGDKSLVEQKY 234 +F I V N++ + P R+ R T V EG I L + S + Sbjct: 191 MFTISQQVHNSTGQAVALYPFYRVNRGYTPEETGGMLVHEGPISVIDGRLNEGSYKTVRT 250 Query: 235 SDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + +I+ H+ + W GI+DKYW +P + + + + + A + Sbjct: 251 GGVPPDNIAWSHQGTGGWAGITDKYWLMAVLPDQNANVIGTYGFQAAQGAYQVGFTATAP 310 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + + G++ +T +FAGAKE + YEKDL +P F +D+GW F+ +P+F ++ + Sbjct: 311 VQVAAGQTASTEAHVFAGAKEVRLLEQYEKDLHVPMFWKAVDFGWLSFLTRPVFFVLDWL 370 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 +G+FG+A++ TV VK+ F PL KQ T ++P++D +R + K P +Q+ Sbjct: 371 NEHLGSFGLALLTFTVIVKVAFLPLTIKQMRMTWKTARLKPQVDLIRSRLKD-DPMAMQQ 429 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 ++ LY+ N+N G P+L+Q PVF+ +YK + +++EMRHAPF GW+KDL+A DPTN+ Sbjct: 430 QIMALYRQENVNLFGGFLPLLIQAPVFWCLYKDLYVTIEMRHAPFVGWVKDLSAPDPTNL 489 Query: 474 FTLFGILPFYL---PGFMHVGIWPIIMSLSMFIQMKM--SPPPADKGQAMILNWMPVVFV 528 F LFG++PF F+ +G WPI+ ++F+ K+ S D Q ++ ++P++F Sbjct: 490 FNLFGLIPFDPTHITPFLALGAWPIMYGATLFLMQKVSSSSANMDPSQQKVMMFIPLLFT 549 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG---AEIGL 566 F ++ P GL+IY+ WSN+++ VQQ VI+ A+ L Sbjct: 550 FFMARQPVGLVIYYCWSNILTAVQQVVIISRLKAADAKPQL 590 >gi|254490319|ref|ZP_05103508.1| 60Kd inner membrane protein [Methylophaga thiooxidans DMS010] gi|224464452|gb|EEF80712.1| 60Kd inner membrane protein [Methylophaga thiooxydans DMS010] Length = 546 Score = 358 bits (918), Expect = 2e-96, Method: Composition-based stats. Identities = 145/572 (25%), Positives = 246/572 (43%), Gaps = 37/572 (6%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ-------VDN 51 M+ +F+ + +S+++ AWQN YV P+ + T + P + Sbjct: 1 MDNLRTFFIFGLLIVSLLLWEAWQNDYVRPQQAADVASQTQTTTPQAPVSDELPDMPSAS 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + + + Q + S +V +K + I +G DL L Y + V L Sbjct: 61 AESLPDVPQSQQVSASSGKVHVKTDVMDLHIATQGGDIRDLALLEYAVSSEQPDTPVQFL 120 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + S + + + I L +++ + + +T Sbjct: 121 NDSAGQFFVTQSGLRADGDAPTHYEHYQAEQTEYVLQAGQDELKIPLYWQSESGLQVVKT 180 Query: 172 ISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 + + Y+ + V NNS + P ++ R++ + G + Sbjct: 181 YNFKRDSYVVNVDYQVINNSGETFSAYPYAQLNRNRSDDDSMFIYTYTGAVFSSKGNEYE 240 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + D++ + S W + Y+ + IP + + F S Y A Sbjct: 241 KVDFDDLDDKAFSRSSID-GWAAMIQHYFVAAIIPPQASE-QLGFYGKSINGTNYTAGVR 298 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 I+ G+ T L+ G K+ + ++ + +D+G I++P+F +M Sbjct: 299 MPAISASSGEQAATQYQLYLGPKKHERLDKVAEN-----LPLTVDYGILTIISEPLFWIM 353 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + + L GN+G +I+L TV +KL FF L+ Y S A M+ + PK+ L+E++ Q Sbjct: 354 EWLHKLTGNWGWSIILLTVLIKLAFFKLSATSYRSMAAMRKLTPKLATLKERYGDDK-QK 412 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 +AM+ LY+T INPL GC PIL+Q+PVF A Y V+ S+E+R A F WI DL A DP Sbjct: 413 FNQAMMDLYRTEKINPLGGCLPILVQMPVFLAFYWVLVESIELRQADFMLWINDLTAMDP 472 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I P++ LSM+ Q K++P P D QAM++ P+VF Sbjct: 473 YF-------------------ILPVLFGLSMWFQQKLNPAPQDPAQAMMMKIFPLVFTVF 513 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + FPAGL++YW +NV+SI QQ I + GA Sbjct: 514 FAFFPAGLVLYWVVNNVLSIAQQWYITRKMGA 545 >gi|258622952|ref|ZP_05717967.1| inner membrane protein, 60 kDa [Vibrio mimicus VM573] gi|258584735|gb|EEW09469.1| inner membrane protein, 60 kDa [Vibrio mimicus VM573] Length = 541 Score = 358 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 141/570 (24%), Positives = 247/570 (43%), Gaps = 41/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + + + + L SI+ G L Y ++ S+ V L + + + Sbjct: 60 ---AAAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYSEELDSSESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ + I Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVSADSFSLAEGQDELRIPMTYQANGIDYTKTFILKRG 174 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y +V V NNS + + ++ + N G D + + Sbjct: 175 SYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234 Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S + +W+ + Y+AS +IP E + +++ Sbjct: 235 DMKDRNLSVPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAAVA-----PNLDLVVDYGWLWFIAKPLHWLLSFIQ 346 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 347 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|117617478|ref|YP_858698.1| membrane protein OxaA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166975847|sp|A0KQZ7|OXAA_AERHH RecName: Full=Inner membrane protein oxaA gi|117558885|gb|ABK35833.1| membrane protein OxaA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 548 Score = 358 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 137/573 (23%), Positives = 245/573 (42%), Gaps = 41/573 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + QT + + + + Sbjct: 1 MESQRNLIL-IGLLFVSFLLWQQW--ESDKAPKPAPTTVAQTEHFVPEAGQTGDIPQVSE 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +A A + + + + L +++ +G +L + L+ + P V L S ++ Y Sbjct: 58 QANANTARKLITVSSDVLKLTLDTQGGDIVSADLLAHKLEEGKDQPFVLL--TSQPEHLY 115 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175 A+ V + + + + ++ ++F + L Sbjct: 116 VAQSGLVGRNGPDSQAQGRPTYEAAQTSYQLADGQDQVVVPMTWTDSKGVVFTKEFVLKR 175 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + + N S + ++ G++ + G S + +Y Sbjct: 176 GDYAVGVDYKIDNKSAEPVQVQFYGQLKQTVTTPKDQQGHAMVASAYRGGAFSSEDTRYK 235 Query: 236 DIEKSSISNFHESN----SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + + + W+ + Y+ S + P+ + +S + + G + + A Sbjct: 236 KYTFDEMKDADLNKTTKGGWVAMLQHYFVSAWAPNAD-DTNSFYSRVIPGKDQAIIGYKA 294 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + + G+ T+ L+ G K + ++ +D+GW +FIA+P+ L++ Sbjct: 295 PLVDVAAGQQAEVTSKLWVGPKLQDQMAKVAN-----HLDLTVDYGWLWFIAQPLHWLLT 349 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 F+ V N+G+AI++ T+ V+ + FPL K QY S A M+ +QPK+ LRE+F Q + Sbjct: 350 VFHGFVQNWGVAIIMLTLLVRGIMFPLTKAQYTSMAKMRMLQPKLAALRERFGD-DRQKM 408 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + M++LYK +NPL GC PIL+Q+P+F A+Y + S+E+RHAPF WI DL+ DP Sbjct: 409 SQGMMELYKKEKVNPLGGCLPILVQMPIFIALYWALMESVELRHAPFALWITDLSVKDPF 468 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 + PI+M SM+ KMSP D Q ++ +MP++F F Sbjct: 469 F-------------------VLPILMGASMWYLQKMSPTTITDPMQQKVMQFMPIIFTFM 509 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL +YW SNVISI QQ +I + + Sbjct: 510 FLWFPAGLTLYWLVSNVISITQQTIIYRQLEKK 542 >gi|145640676|ref|ZP_01796259.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae R3021] gi|145274602|gb|EDK14465.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 22.4-21] Length = 541 Score = 358 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 142/567 (25%), Positives = 255/567 (44%), Gaps = 38/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + +I S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y ++ S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A ++ ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETNYKKYSFAD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + +TI Sbjct: 234 MQDNNLSIGTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 SGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+ Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+I QQ +I + + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|77461960|ref|YP_351467.1| putative inner membrane protein translocase component YidC [Pseudomonas fluorescens Pf0-1] gi|123602665|sp|Q3K428|OXAA_PSEPF RecName: Full=Inner membrane protein oxaA gi|77385963|gb|ABA77476.1| putative inner membrane protein [Pseudomonas fluorescens Pf0-1] Length = 560 Score = 358 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 149/583 (25%), Positives = 245/583 (42%), Gaps = 51/583 (8%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL S ++V W Y + N + N+ AA Sbjct: 1 MDI-KRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVASSTTTSGLPDTATGNNAAASD 59 Query: 58 IDDRAQALSMSP----------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 RA + + +P +++K L SI+ +G L L Y Sbjct: 60 DIPRAASDTSAPAETPVAASKDLIQIKTDVLDLSIDPQGGDVAQLTLPLYPRRQDRPDVP 119 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNA 163 L + + Y A+ + T P +++ KL F Sbjct: 120 FQLF-DNGGERTYLAQSGLIGTNGPDANPAGRPIYSSEKKTYQLADGQDKLVVDLKFSKD 178 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEG 219 +R Y + + N S S ++ R G Sbjct: 179 GVNYIKRFTLKRGLYDVTVTYLIDNQSAQPWSGSMFAQLKRDASADPSSTTATGTATYLG 238 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + + D++K+ + + W+ Y+ + ++ K + Q + S Sbjct: 239 AALWTSSEPYKKVSMKDMDKAQLKET-VTGGWVAWLQHYFVTAWVAPKGENNIVQTRKDS 297 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G Y ++ +T PG + T+ L+AG K + P E+ +D+G Sbjct: 298 KG--NYIIGYTGPSLTAAPGAKVETSAVLYAGPKSQAVLKELS-----PGLELTVDYGIL 350 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +FIA+P+F L+ + +++VGN+G +I+ T+ +K +FFPL+ Y S A M+ + PK+ L Sbjct: 351 WFIAQPIFWLLQHIHSIVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAAL 410 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR APF Sbjct: 411 KEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFM 469 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+ DP I PIIM +MFIQ +++P P D QA + Sbjct: 470 LWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAKV 510 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 511 MKMMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKIEA 553 >gi|16272937|ref|NP_439163.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae Rd KW20] gi|260580091|ref|ZP_05847921.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus influenzae RdAW] gi|1168226|sp|P44973|OXAA_HAEIN RecName: Full=Inner membrane protein oxaA gi|1574032|gb|AAC22663.1| inner membrane protein, 60 kDa (yidC) [Haemophilus influenzae Rd KW20] gi|260093375|gb|EEW77308.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus influenzae RdAW] Length = 541 Score = 358 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 142/567 (25%), Positives = 256/567 (45%), Gaps = 38/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + +I S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y ++ S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A ++ ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETNYKKYSFSD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + + +TI Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGSVVTIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+ Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+I QQ +I + + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|59710610|ref|YP_203386.1| putative inner membrane protein translocase component YidC [Vibrio fischeri ES114] gi|59478711|gb|AAW84498.1| cytoplasmic insertase into membrane protein, Sec system [Vibrio fischeri ES114] Length = 541 Score = 358 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 138/571 (24%), Positives = 240/571 (42%), Gaps = 43/571 (7%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N +A+AL S ++ WQ + ++ ++ P + + Sbjct: 1 MDTQRNILLLALALVSFLLFQQWQVETNPQQPATVSTVQQTQTDGDVP-----TSSTANS 55 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D A + + + L ++ G + L Y ++ S + V L ++ + Sbjct: 56 DTPADSAQSDKLITITTDVLTLKVDTLGGDIIESVLNKYDAELGSKAKFVLL--KNDATH 113 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVFKNANNILFERTISLD 175 +Y A+ + + + L + I Sbjct: 114 SYVAQSGLIGPQGIDSNSGRAQFTAQKTDYVLAEGQNELRVPLTLVKDGITYTKTLILKR 173 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKY 234 + Y + TV N S + ++ + T G D + + Sbjct: 174 DSYAIDVDYTVDNQSSAPATVEMYTNLKQNLMDDGGSLTMPTYRGAAYSTEDTRYKKYSF 233 Query: 235 SDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D+E ++S + W G+ Y+AS +IP + D Sbjct: 234 DDMEDKNLSIDMTNGQGWAGMLQHYFASAWIPRNVNDAKLTSRVAGD---YGYIGVRMPS 290 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 +TI G+ T + L+ G K + P ++ +D+GW +FIA P+ L+S+ Sbjct: 291 VTIPAGQEATLSATLWTGPKLQKEMAATA-----PYLDLTVDYGWLWFIASPLHKLLSFI 345 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 +V N+G+AI++ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 QGIVVNWGLAIIVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGD-DRQRMSQ 404 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYK +NPL GC PILLQ+P+F ++Y + S+E+RH PF+GWI DL+A DP Sbjct: 405 EMMELYKKEKVNPLGGCLPILLQMPIFISLYWALMESVELRHTPFFGWITDLSAQDPYY- 463 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 I P++M SMF+ KMSP D Q I+ +MPV+F Sbjct: 464 ------------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTVFFL 505 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + + Sbjct: 506 WFPSGLVLYWLVSNIVTLIQQTLIYRALEKK 536 >gi|309973500|gb|ADO96701.1| Inner membrane translocation protein YidC [Haemophilus influenzae R2846] Length = 541 Score = 358 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 142/567 (25%), Positives = 254/567 (44%), Gaps = 38/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + +I S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y ++ S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A + ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSDTNYKKYSFAD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + +TI Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 SGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+ Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+I QQ +I + + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|313202488|ref|YP_004041146.1| 60 kda inner membrane insertion protein [Methylovorus sp. MP688] gi|312441804|gb|ADQ85910.1| 60 kDa inner membrane insertion protein [Methylovorus sp. MP688] Length = 549 Score = 358 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 147/573 (25%), Positives = 251/573 (43%), Gaps = 34/573 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYV--YPRIEEMNNERKNIQTVKQPNQVDNSYAAV-LI 58 + + S I+ W + P E + E +V ++ + AA + Sbjct: 1 MDTKRLILFVIFSFSILMLWDAWQREHTPPPETVTAEAATDNSVPHAEKLPGAKAAADMP 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + L + R++++ I+ G L L + D S+ V LL Sbjct: 61 KESGFRLQTADRIQVETDVYKAVIDTTGGDLRRLELLKHRADNSTTENFV-LLDDRAAPM 119 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EH 177 Y A+ + + + T ++L +A+ + ++ + + Sbjct: 120 VYVAQSGLIGQGLPNHKTVFTAEASNYQLAAGSDTLEVRLTAASADGVKVDKIYTFHRDS 179 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y+ + + N S I + +++ + ++ G + + D Sbjct: 180 YVINLRYEIHNESASPIDPTVYYQVVHDTESNQGSHMMPTFTGGAYFTQADKFKKLSFKD 239 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + K+ +S S+ W+G+ Y+ S +IP + QF Y ++ I Sbjct: 240 MGKNDLSKT-TSDGWVGLLQHYFVSAWIPKEG--VTRQFYSKKLADNIYSIGTKSDIGVI 296 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG S +AG + + P E +D+GW IA P+F ++S ++ Sbjct: 297 APGASAEVEARYYAGPQNQEVMKQVA-----PGLEYTVDYGWLTIIASPLFWILSKIESV 351 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 V N+G+AI+L TV +KL F+PL+ Y S A+M+ + P++ L+E++ Q +Q AM+ Sbjct: 352 VHNWGVAIILLTVMIKLAFYPLSAASYRSMAHMRELAPRLQRLKEQYGD-DRQKMQVAMM 410 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYKT INP+ GC PIL+QIPVF ++Y V+ S+EMRHAPF WI DL+A DP Sbjct: 411 ELYKTEKINPMGGCLPILVQIPVFISLYWVLLGSVEMRHAPFMLWIHDLSAIDPYY---- 466 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 + PI+M +M IQ +++P P D QA ++ MP+VF FPA Sbjct: 467 ---------------VLPILMGATMIIQTRLNPTPTDPVQAKVMMIMPIVFSVFFFFFPA 511 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 GL++YW +NV+SI QQ I + L + Sbjct: 512 GLVLYWLVNNVLSIAQQWHINRSTERATALKKK 544 >gi|68249585|ref|YP_248697.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 86-028NP] gi|229843940|ref|ZP_04464081.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 6P18H1] gi|81335986|sp|Q4QLR0|OXAA_HAEI8 RecName: Full=Inner membrane protein oxaA gi|68057784|gb|AAX88037.1| preprotein translocase subunit YidC [Haemophilus influenzae 86-028NP] gi|229812934|gb|EEP48622.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 6P18H1] Length = 541 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 142/567 (25%), Positives = 255/567 (44%), Gaps = 38/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + +I S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y ++ S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A ++ ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETNYKKYSFAD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + +TI Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+ Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+I QQ +I + + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|319897488|ref|YP_004135685.1| inner membrane protein oxaa [Haemophilus influenzae F3031] gi|317432994|emb|CBY81365.1| Inner membrane protein oxaA [Haemophilus influenzae F3031] Length = 541 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 142/567 (25%), Positives = 256/567 (45%), Gaps = 38/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + +I S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y +++S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELNSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQVEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A ++ ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETNYKKYSFSD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + +TI Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+ Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+I QQ +I + + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|261213269|ref|ZP_05927551.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC341] gi|260837543|gb|EEX64246.1| OxaI/YidC membrane insertion protein [Vibrio sp. RC341] Length = 541 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 141/570 (24%), Positives = 244/570 (42%), Gaps = 41/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAADAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + + + + L SI+ G L Y ++ S V L + + + Sbjct: 60 ---AAAQAKTITVTSDVLTLSIDTLGGDIVSAKLNQYAEELDSAESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ + I Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVNAESFTLAEGQDELRIPMTYQANGIDYTKTFILKRG 174 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y +V V NNS + + ++ + N G D + + Sbjct: 175 SYAVDVVFDVANNSGNPATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234 Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S + +W + Y+AS +IP E + +S+ Sbjct: 235 DMKDRNLSAPNDVTVNWAAMIQHYFASAWIPRNEPQAQLYSRVISNLGD---IGIRTPNK 291 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 292 TIANGDKAEFEATLWVGPKLQDKMAAVA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQ 346 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 347 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PI+LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 406 MMELYKKEKVNPLGGCLPIVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLW 506 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|229846058|ref|ZP_04466170.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 7P49H1] gi|229811062|gb|EEP46779.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 7P49H1] Length = 541 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 142/567 (25%), Positives = 254/567 (44%), Gaps = 38/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + +I S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y ++ S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A + ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSDTNYKKYSFAD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + +TI Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+ Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+I QQ +I + + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|329123023|ref|ZP_08251594.1| YidC/Oxa1 family membrane protein insertase [Haemophilus aegyptius ATCC 11116] gi|327471954|gb|EGF17394.1| YidC/Oxa1 family membrane protein insertase [Haemophilus aegyptius ATCC 11116] Length = 541 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 143/567 (25%), Positives = 255/567 (44%), Gaps = 38/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + +I S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y +++S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELNSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ + + N A ++ ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVENSGNVAMPTYTGGAYSSSETNYKKYSFSD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + +TI Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 AGSQETITSSLWIGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FPA Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPA 507 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+I QQ +I + + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|145634176|ref|ZP_01789887.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittAA] gi|148826353|ref|YP_001291106.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittEE] gi|166975868|sp|A5UD72|OXAA_HAEIE RecName: Full=Inner membrane protein oxaA gi|145268620|gb|EDK08613.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittAA] gi|148716513|gb|ABQ98723.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittEE] Length = 541 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 140/567 (24%), Positives = 254/567 (44%), Gaps = 38/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + +I S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y ++ S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A ++ ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETNYKKYSFAD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + +TI Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+MP++F+ FP+ Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIFMVFFLWFPS 507 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+I QQ +I + + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|145637306|ref|ZP_01792967.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittHH] gi|145269558|gb|EDK09500.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittHH] Length = 541 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 142/567 (25%), Positives = 253/567 (44%), Gaps = 38/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + +I S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y ++ S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ + + N A + ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVENSGNVAMPTYTGGAYSSSDTNYKKYSFAD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + +TI Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 SGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+ Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+I QQ +I + + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|254000529|ref|YP_003052592.1| 60 kDa inner membrane insertion protein [Methylovorus sp. SIP3-4] gi|253987208|gb|ACT52065.1| 60 kDa inner membrane insertion protein [Methylovorus sp. SIP3-4] Length = 549 Score = 357 bits (916), Expect = 3e-96, Method: Composition-based stats. Identities = 147/573 (25%), Positives = 251/573 (43%), Gaps = 34/573 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYV--YPRIEEMNNERKNIQTVKQPNQVDNSYAAV-LI 58 + + S I+ W + P E + E +V ++ + AA + Sbjct: 1 MDTKRLILFVIFSFSILMLWDAWQREHTPPPETVTAEAATDNSVPHAEKLPGAKAAADMP 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + L + R++++ I+ G L L + D S+ V LL Sbjct: 61 KESGFRLQTADRIQVETDVYKAVIDTTGGDLRRLELLKHRADNSTTENFV-LLDDRAAPM 119 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EH 177 Y A+ + + + T ++L +A+ + ++ + + Sbjct: 120 VYVAQSGLIGQGLPNHKTVFTAEASNYQLAAGSDTLEVRLTAASADGVKVDKIYTFHRDS 179 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y+ + + N S I + +++ + ++ G + + D Sbjct: 180 YVINLRYEIHNESASPIDPTVYYQVVHDTESNQGSHMMPTFTGGAYFTQADKFKKLSFKD 239 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + K+ +S S+ W+G+ Y+ S +IP + QF Y ++ I Sbjct: 240 MGKNDLSKT-TSDGWVGLLQHYFVSAWIPKEG--VTRQFYSKKLADNIYSIGTKSDIGVI 296 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG S +AG + + P E +D+GW IA P+F ++S ++ Sbjct: 297 APGASAEVDARYYAGPQNQEVMKQVA-----PGLEYTVDYGWLTIIASPLFWILSKIESV 351 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 V N+G+AI+L TV +KL F+PL+ Y S A+M+ + P++ L+E++ Q +Q AM+ Sbjct: 352 VHNWGVAIILLTVMIKLAFYPLSAASYRSMAHMRELAPRLQRLKEQYGD-DRQKMQVAMM 410 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYKT INP+ GC PIL+QIPVF ++Y V+ S+EMRHAPF WI DL+A DP Sbjct: 411 ELYKTEKINPMGGCLPILVQIPVFISLYWVLLGSVEMRHAPFMLWIHDLSAIDPYY---- 466 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 + PI+M +M IQ +++P P D QA ++ MP+VF FPA Sbjct: 467 ---------------VLPILMGATMIIQTRLNPTPTDPVQAKVMMIMPIVFSVFFFFFPA 511 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 GL++YW +NV+SI QQ I + L + Sbjct: 512 GLVLYWLVNNVLSIAQQWHINRSTERATALKKK 544 >gi|219871547|ref|YP_002475922.1| putative inner membrane protein translocase component YidC [Haemophilus parasuis SH0165] gi|254772790|sp|B8F6M2|OXAA_HAEPS RecName: Full=Inner membrane protein oxaA gi|219691751|gb|ACL32974.1| putative inner membrane protein translocase component YidC [Haemophilus parasuis SH0165] Length = 546 Score = 357 bits (916), Expect = 3e-96, Method: Composition-based stats. Identities = 148/569 (26%), Positives = 257/569 (45%), Gaps = 37/569 (6%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M N + + + +S +I WQ Y P I+ QT + NQ + A+ Sbjct: 1 MNSNRSLLIMGLLLVSFLIFTQWQQDYN-PEIQAQKQAMAQAQTQQVANQSSDVPASSNA 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + ++ L +++ G D +L Y+ ++ SN+P L N K Sbjct: 60 ASINEQSTKGKTITIETDVLRLTVDTLGGDVVDSDLLKYNAELDSNTPFELL--QDNGKV 117 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTISLD 175 Y A+ V L L F+ + + Sbjct: 118 LYVAQSGLVGKNGIDTTAGRAQYQATAEKFALAEGQDEIALPLTFEKDGVVYTKTFTLKR 177 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + + N + + + P G++ ++ N A + ++ Sbjct: 178 GSYNVAVNYHIKNGTAETLEVQPYGQLKHTLVESTGNFAMPTYTGGAYSSSEVNYKKYSF 237 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D + + W + Y+ S +IP+++ + + G+ + Sbjct: 238 DEMAKANLSVDTKAGWAAVLQHYFVSAWIPNQDAENNLYTRT---GNGVGTIGYRGPVTQ 294 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + P T T+ L+ G K+ + + F++ +D+GW +FIAKP+F L+++ + Sbjct: 295 VAPNGEATITSHLWTGPKDQAAMAQVANN-----FDLTVDYGWAWFIAKPLFWLLTFIQS 349 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +V N+G+AI+ T+ VK + +PL K QY S A M+ +QP+I E+RE+F Q + + M Sbjct: 350 IVSNWGLAIIGVTIVVKTILYPLTKAQYTSMAKMRMLQPRIQEMRERFGD-DRQRMSQEM 408 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NP+ GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP IF Sbjct: 409 MKLYKEEKVNPMGGCLPILLQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIF- 467 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534 P++M SM++ KMSP P AD Q ++N+MPV+F F Sbjct: 468 ------------------PLLMGGSMYLLQKMSPTPIADPVQQKVMNFMPVMFTVFFLWF 509 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+GL++YW SN+I+I QQ +I + + Sbjct: 510 PSGLVLYWLTSNLITIAQQWLIYRNLEKK 538 >gi|269103816|ref|ZP_06156513.1| OxaI/YidC membrane insertion protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268163714|gb|EEZ42210.1| OxaI/YidC membrane insertion protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 540 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 138/568 (24%), Positives = 244/568 (42%), Gaps = 39/568 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + +Q + + + ++ ++ Sbjct: 1 MDSQRN-ILLIALLFVSFLLFQQWNSDKNPQPQSQGVAQQVNNSGDVPSHSADGQLVT-- 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 S + +K L +++ G D L Y+ + S P V L +N +++Y Sbjct: 58 --DQSSSQNLITIKTDVLALTVDTLGGDVVDAKLLKYNNTLGSKDPFVLL--ENNPEHSY 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176 A+ + I+ + + +L ++ + + Sbjct: 114 VAQSGLIGQNG-IDTNAGRAQFTVSGKDFTLAPDQKELRVPMTYEKDGIKYTKTFVLKPN 172 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y + T+ N S ++ + ++ A + ++ D Sbjct: 173 SYAVNVDYTIDNQSAAPTSVQMYAQLRHSLVASKSSLTMPTYQGGAYSSVDTNYKKYSFD 232 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 K N + W+ + Y+ S +IP + Y +T+ Sbjct: 233 DMKDKNLNVTTPDGWVAVLQHYFVSAWIPRDGNESLNNL-YSRSSDGNGYIGVRMPAVTV 291 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG + T L+ G K + K+ + +D+GW +FIA P+ L+S+ +++ Sbjct: 292 APGATDTLKATLWVGPKLQNEMAATAKN-----LNLTVDYGWLWFIASPLHKLLSFIHSI 346 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+G+AIM+ T V+ +PL K QY S A M+ +QPK+ +RE+F Q L + M+ Sbjct: 347 VGNWGVAIMVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERFGD-DRQRLSQEMM 405 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY+ +NPL GC PIL+Q+P+F A+Y + S+E+RHAPF+GWI DL+A DP Sbjct: 406 ELYRKEKVNPLGGCLPILVQMPIFIALYWALMESVELRHAPFFGWIHDLSAQDPYY---- 461 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 I PI+M ++MF+ KMSP D Q I+ +MPV+F F FP Sbjct: 462 ---------------ILPILMGITMFMIQKMSPSTITDPMQQKIMTFMPVMFTFFFLWFP 506 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +GL++YW SN+++++QQ +I + + Sbjct: 507 SGLVLYWLVSNIVTLIQQTLIYRSLEKK 534 >gi|145632386|ref|ZP_01788121.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 3655] gi|144987293|gb|EDJ93823.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 3655] Length = 541 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 139/567 (24%), Positives = 254/567 (44%), Gaps = 38/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + +I S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y ++ S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A ++ ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETNYKKYSFSD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + ++I Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVSIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+MP++F+ FP+ Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIFMVFFLWFPS 507 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+I QQ +I + + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|145630098|ref|ZP_01785880.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae R3021] gi|144984379|gb|EDJ91802.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae R3021] Length = 541 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 140/567 (24%), Positives = 254/567 (44%), Gaps = 38/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + +I S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y ++ S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A ++ ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETNYKKYSFSD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + +TI Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 SGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+MP++F+ FP+ Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIFMVFFLWFPS 507 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+I QQ +I + + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|319775066|ref|YP_004137554.1| Inner membrane protein oxaA [Haemophilus influenzae F3047] gi|317449657|emb|CBY85863.1| Inner membrane protein oxaA [Haemophilus influenzae F3047] Length = 541 Score = 357 bits (915), Expect = 4e-96, Method: Composition-based stats. Identities = 141/567 (24%), Positives = 254/567 (44%), Gaps = 38/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + +I S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y ++ S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A ++ ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETNYKKYSFSD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + + +TI Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGSVVTIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRE-CFGDDRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+ Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+I QQ +I + + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|301169726|emb|CBW29327.1| cytoplasmic insertase into membrane protein, Sec system [Haemophilus influenzae 10810] Length = 541 Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats. Identities = 143/567 (25%), Positives = 257/567 (45%), Gaps = 38/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + +I S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y +++S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELNSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A ++ ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSETNYKKYSFSD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + + +TI Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGSVVTIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FPA Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPA 507 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+I QQ +I + + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|153803663|ref|ZP_01958249.1| inner membrane protein, 60 kDa [Vibrio cholerae MZO-3] gi|153830819|ref|ZP_01983486.1| inner membrane protein, 60 kDa [Vibrio cholerae 623-39] gi|229515955|ref|ZP_04405412.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TMA 21] gi|254291134|ref|ZP_04961931.1| inner membrane protein, 60 kDa [Vibrio cholerae AM-19226] gi|297581961|ref|ZP_06943881.1| inner membrane protein [Vibrio cholerae RC385] gi|124120800|gb|EAY39543.1| inner membrane protein, 60 kDa [Vibrio cholerae MZO-3] gi|148873703|gb|EDL71838.1| inner membrane protein, 60 kDa [Vibrio cholerae 623-39] gi|150422979|gb|EDN14929.1| inner membrane protein, 60 kDa [Vibrio cholerae AM-19226] gi|229347055|gb|EEO12017.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TMA 21] gi|297533828|gb|EFH72669.1| inner membrane protein [Vibrio cholerae RC385] Length = 541 Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats. Identities = 141/570 (24%), Positives = 244/570 (42%), Gaps = 41/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + + L SI+ G L Y +++S V L + + + Sbjct: 60 ---VAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ + I Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRG 174 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y +V V NNS + + ++ + N G D + + Sbjct: 175 SYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234 Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S + +W+ + Y+AS +IP E + +++ Sbjct: 235 DMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQ 346 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 N VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 347 NFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|260581921|ref|ZP_05849717.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus influenzae NT127] gi|260095114|gb|EEW79006.1| membrane protein insertase, YidC/Oxa1 family domain [Haemophilus influenzae NT127] Length = 541 Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats. Identities = 141/567 (24%), Positives = 255/567 (44%), Gaps = 38/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + ++ S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSMTATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y ++ S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A ++ ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETNYKKYSFSD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + +TI Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+MP+VF+F FP+ Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLVFMFFFLWFPS 507 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+I QQ +I + + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|229530208|ref|ZP_04419597.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 12129(1)] gi|229332341|gb|EEN97828.1| OxaI/YidC membrane insertion protein [Vibrio cholerae 12129(1)] Length = 541 Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats. Identities = 140/570 (24%), Positives = 244/570 (42%), Gaps = 41/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + + L SI+ G L Y +++S V L + + + Sbjct: 60 ---VAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ + I Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRG 174 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y +V V NNS + + ++ + N G D + + Sbjct: 175 SYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234 Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S + +W+ + Y+AS +IP E + +++ Sbjct: 235 DMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQ 346 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 347 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|15640036|ref|NP_062588.1| putative inner membrane protein translocase component YidC [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591471|ref|ZP_01678744.1| inner membrane protein, 60 kDa [Vibrio cholerae 2740-80] gi|147674272|ref|YP_001218407.1| putative inner membrane protein translocase component YidC [Vibrio cholerae O395] gi|153212974|ref|ZP_01948568.1| inner membrane protein, 60 kDa [Vibrio cholerae 1587] gi|153821953|ref|ZP_01974620.1| inner membrane protein, 60 kDa [Vibrio cholerae B33] gi|227080241|ref|YP_002808792.1| putative Inner membrane protein [Vibrio cholerae M66-2] gi|229508291|ref|ZP_04397795.1| OxaI/YidC membrane insertion protein [Vibrio cholerae BX 330286] gi|229508870|ref|ZP_04398361.1| OxaI/YidC membrane insertion protein [Vibrio cholerae B33] gi|229606565|ref|YP_002877213.1| inner membrane protein translocase component YidC [Vibrio cholerae MJ-1236] gi|254851570|ref|ZP_05240920.1| inner membrane protein oxaA [Vibrio cholerae MO10] gi|255746812|ref|ZP_05420758.1| OxaI/YidC membrane insertion protein [Vibrio cholera CIRS 101] gi|262155892|ref|ZP_06029014.1| OxaI/YidC membrane insertion protein [Vibrio cholerae INDRE 91/1] gi|262167094|ref|ZP_06034809.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC27] gi|298501190|ref|ZP_07010989.1| inner membrane protein [Vibrio cholerae MAK 757] gi|38503195|sp|Q9KVY4|OXAA_VIBCH RecName: Full=Inner membrane protein oxaA gi|172047497|sp|A5F484|OXAA_VIBC3 RecName: Full=Inner membrane protein oxaA gi|254778170|sp|C3LP77|OXAA_VIBCM RecName: Full=Inner membrane protein oxaA gi|9654395|gb|AAF93182.1| inner membrane protein, 60 kDa [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546673|gb|EAX56855.1| inner membrane protein, 60 kDa [Vibrio cholerae 2740-80] gi|124116200|gb|EAY35020.1| inner membrane protein, 60 kDa [Vibrio cholerae 1587] gi|126520492|gb|EAZ77715.1| inner membrane protein, 60 kDa [Vibrio cholerae B33] gi|146316155|gb|ABQ20694.1| inner membrane protein, 60 kDa [Vibrio cholerae O395] gi|227008129|gb|ACP04341.1| putative Inner membrane protein [Vibrio cholerae M66-2] gi|227011993|gb|ACP08203.1| putative Inner membrane protein [Vibrio cholerae O395] gi|229354145|gb|EEO19077.1| OxaI/YidC membrane insertion protein [Vibrio cholerae B33] gi|229354564|gb|EEO19486.1| OxaI/YidC membrane insertion protein [Vibrio cholerae BX 330286] gi|229369220|gb|ACQ59643.1| OxaI/YidC membrane insertion protein [Vibrio cholerae MJ-1236] gi|254847275|gb|EET25689.1| inner membrane protein oxaA [Vibrio cholerae MO10] gi|255735569|gb|EET90968.1| OxaI/YidC membrane insertion protein [Vibrio cholera CIRS 101] gi|262024480|gb|EEY43166.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC27] gi|262030344|gb|EEY48986.1| OxaI/YidC membrane insertion protein [Vibrio cholerae INDRE 91/1] gi|297540062|gb|EFH76124.1| inner membrane protein [Vibrio cholerae MAK 757] Length = 541 Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats. Identities = 140/570 (24%), Positives = 243/570 (42%), Gaps = 41/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + + L SI+ G L Y +++S V L + + + Sbjct: 60 ---VAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ + I Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRG 174 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y +V V NNS + + ++ + N G D + + Sbjct: 175 SYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234 Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S + +W+ + Y+AS +IP E + +++ Sbjct: 235 DMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQ 346 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 347 TFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|254788526|ref|YP_003075955.1| preprotein translocase subunit YidC [Teredinibacter turnerae T7901] gi|259515729|sp|C5BKL7|OXAA_TERTT RecName: Full=Inner membrane protein oxaA gi|237685608|gb|ACR12872.1| preprotein translocase subunit YidC [Teredinibacter turnerae T7901] Length = 560 Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats. Identities = 139/580 (23%), Positives = 245/580 (42%), Gaps = 48/580 (8%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M N + + +S +++ W F E + + + + + Sbjct: 1 MNLLRNALIGGIVLVSFLLIIRWNEFQERKFEETQLQQSSANNSERVAPSIPSEQPQAPN 60 Query: 59 DDR---------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 + ++ + +L I+ G L L Y+ + Sbjct: 61 GEEVPDAPASDSKDAVEFTANADNDRQIHISTDTLDLVIDTNGGDIVRLALPQYYAMLHE 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVF 160 LL+ ++T + Y A+ V S L P L + Sbjct: 121 KDNPFVLLNNNDT-STYIAQSGLVGPNGTDGKNGRPRFSAASSDYTLEPGKDTLVVDLKY 179 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQE 218 + + I+ +R + YL + + N + G+I R H P A Sbjct: 180 QQESAIITKRFTFHRDSYLIDLEYLIENTGDTNWVGNLYGQIKRDDHNPAQAVGVGMQPF 239 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 A+ ++ ++ D + W+ + Y+ S ++P ++ + Sbjct: 240 LGAAITTPETNYKKLKFDELAKEKLEVSNTGGWVAMVQHYFMSAWVPDQDKDQKYVLRKS 299 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + + + + + T+ PG + + +AG K + P ++ ID+ W Sbjct: 300 RNANMYFLSFTTLTSTTVAPGTTGSIKAQYYAGPKHIRVLEKIA-----PHLDLTIDYSW 354 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +FIAKP+F + + + LVGN+G+AI+L T +KL+FF + Y S A M+ +QP ++E Sbjct: 355 LWFIAKPLFYALDFIHGLVGNWGLAIILLTCCIKLVFFYPSAMSYRSMAKMRKVQPLMNE 414 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+E++ Q + +++LYK +NPL GC PILLQ+PVF A+Y +I S+E+RHAPF Sbjct: 415 LKERYGD-DRQRMSAELMKLYKKEKVNPLGGCLPILLQMPVFIALYWMIMESVELRHAPF 473 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + WI DL+ DP + P+IM ++M+IQ K++P PAD QA Sbjct: 474 FLWIHDLSVRDPYF-------------------VLPLIMGVTMWIQQKLNPTPADPMQAK 514 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ MP F FPAGL++YW +N +SI QQ +I + Sbjct: 515 VMQLMPFFFTALFMMFPAGLVLYWVVNNTLSITQQYIITR 554 >gi|167856364|ref|ZP_02479091.1| putative inner membrane protein translocase component YidC [Haemophilus parasuis 29755] gi|167852502|gb|EDS23789.1| putative inner membrane protein translocase component YidC [Haemophilus parasuis 29755] Length = 546 Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats. Identities = 149/569 (26%), Positives = 260/569 (45%), Gaps = 37/569 (6%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M N + + + +S +I WQ Y P I+ QT + NQ + A+ + Sbjct: 1 MNSNRSLLIMGLLLVSFLIFTQWQQDYN-PEIQAQKQAMAQAQTQQVANQSSDVPASSNV 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + ++ L +++ G D +L Y+ ++ SN+P L N K Sbjct: 60 ASINEQSTKGKTITIETDVLRLTVDTLGGDVVDSDLLKYNAELDSNTPFELL--QDNGKV 117 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT---PIKLVFKNANNILFERTISLD 175 Y A+ V L + L F+ + + + Sbjct: 118 LYVAQSGLVGKNGIDTTAGRAQYQATAEKFALAEGQNEIDVPLTFEKDDVVYTKTFTLKR 177 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + + N S + + P G++ ++A N A + ++ Sbjct: 178 GSYNVAVNYHIKNGSAETLEVQPYGQLKHTLVESAGNFAMPTYTGGAYSSSEVNYKKYSF 237 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D + + W + Y+ S +IP+++ + + G+ + Sbjct: 238 DEMAKANLSVDTKAGWAAVLQHYFVSAWIPNQDAENNLYTRT---GNGVGTIGYRGPVTQ 294 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + P T + L+ G K+ + + F++ +D+GW +FIAKP+F L+++ + Sbjct: 295 VAPNGEATIISHLWTGPKDQAAMAQVANN-----FDLTVDYGWAWFIAKPLFWLLTFIQS 349 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +V N+G+AI+ T+ VK + +PL K QY S A M+ +QP+I E+RE+F Q + + M Sbjct: 350 IVSNWGLAIIGVTIVVKTILYPLTKAQYTSMAKMRMLQPRIQEMRERFGD-DRQRMSQEM 408 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NP+ GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP IF Sbjct: 409 MKLYKEEKVNPMGGCLPILLQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIF- 467 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534 P++M SM++ KMSP P AD Q ++N+MPV+F F Sbjct: 468 ------------------PLLMGGSMYLLQKMSPTPIADPVQQKVMNFMPVMFTVFFLWF 509 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+GL++YW SN+I+I QQ +I + + Sbjct: 510 PSGLVLYWLTSNLITIAQQWLIYRNLEKK 538 >gi|120556799|ref|YP_961150.1| putative inner membrane protein translocase component YidC [Marinobacter aquaeolei VT8] gi|166975875|sp|A1U7J4|OXAA_MARAV RecName: Full=Inner membrane protein oxaA gi|120326648|gb|ABM20963.1| protein translocase subunit yidC [Marinobacter aquaeolei VT8] Length = 567 Score = 356 bits (913), Expect = 6e-96, Method: Composition-based stats. Identities = 145/593 (24%), Positives = 243/593 (40%), Gaps = 60/593 (10%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN----------- 47 M+ A +S ++V AW Y P+ E++ + + + + Sbjct: 1 MDIQRIVLFAGLAIVSYLMVLAWNEDYHQPQTEQVAEAQSSSDSSATNSTDDMILPEDNN 60 Query: 48 ------QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 + + + + + I+ G D +L Y + Sbjct: 61 AGGEEFATPETGSLASTSANSDQDLADRFITVTTDVYELKIDRVGGNVVDSSLLQYDESL 120 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPI 156 S P+ L + + Y E + I Sbjct: 121 DSEQPLKLLTN--TSTRTYLLESGLIGRDGPDGSQAGEAPVFQAETGSYQLAEGEDELTI 178 Query: 157 KLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 LV+ + + + L Y + + N S + + G+I+R + T+ Sbjct: 179 NLVYTTDSGVAITKRYHLARNSYQIDVSYLIDNRSESPWQGNFTGKIVRDQAPDPTSQAS 238 Query: 216 V----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + G + + + + D+ N +N WL Y+ + +IP ++ Sbjct: 239 MGIRAYLGMVISTPEDPYEKYDFEDL-SEKRVNQSVTNGWLAFLQHYFLTAWIPERDQKA 297 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 Q D + F T+ PG++ + G K + P + Sbjct: 298 QFQTTRRGD---LHVMGFVYPATTVAPGETAEVGATAYVGPKIIDRLEALA-----PNLD 349 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW +FI+ P+F ++ +FY LVGN+G+AI+L TV VK +FF L+ Y S A M+ Sbjct: 350 RTVDFGWLFFISLPLFYILEWFYGLVGNWGVAIILLTVLVKAVFFHLSATSYRSMAKMRA 409 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + P++ L+E + Q + + M+ LYK INPL GC PIL+Q+PVF ++Y V+ S+ Sbjct: 410 VAPQLTRLKELYGD-DRQRMSQEMMALYKREKINPLGGCLPILVQMPVFISLYWVLFESV 468 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 ++RHAPF WI+DL+ DP I PI+M SMFIQM ++P P Sbjct: 469 QLRHAPFMLWIQDLSQMDPYF-------------------ILPILMGASMFIQMSLNPTP 509 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 D QA I+ MP++F FPAGL++YW +N++SI QQ I + AE Sbjct: 510 PDPMQAKIMKLMPLIFTVFFLWFPAGLVLYWLVNNILSISQQWYITRKIEAET 562 >gi|145638178|ref|ZP_01793788.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittII] gi|145272507|gb|EDK12414.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae PittII] gi|309751334|gb|ADO81318.1| Inner membrane translocation protein YidC [Haemophilus influenzae R2866] Length = 541 Score = 356 bits (912), Expect = 7e-96, Method: Composition-based stats. Identities = 139/567 (24%), Positives = 253/567 (44%), Gaps = 38/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + +I S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y ++ S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRFGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A ++ ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIIESSGNVAMPTYTGGAYSSSETNYKKYSFAD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + ++I Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVSIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 AGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+MP++F+ FP+ Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNFMPLIFMVFFLWFPS 507 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+I QQ +I + + Sbjct: 508 GLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|88811304|ref|ZP_01126560.1| 60 kDa inner membrane insertion protein [Nitrococcus mobilis Nb-231] gi|88791843|gb|EAR22954.1| 60 kDa inner membrane insertion protein [Nitrococcus mobilis Nb-231] Length = 548 Score = 355 bits (911), Expect = 9e-96, Method: Composition-based stats. Identities = 141/561 (25%), Positives = 229/561 (40%), Gaps = 30/561 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME F+ +AL ++ W + + + Sbjct: 1 MENQR-LFLFLALGAVLFLLWDAWQQDYGPRPPTPQSTEQAVQAPQADGPAEELPTELRQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +A + R+ + IN G L + +P L Sbjct: 60 QAGLAAQGMRISVVTDLFAIEINTVGGGIGSAKLLKHATSTDDPAPFTLLRDQGKPLFVV 119 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF-ERTISLDEHYL 179 A L + + + LV+ N I R I Y Sbjct: 120 QAGLRAKEGSAPGTQARFQSRQKAYQLASGEQQLVVPLVWHGPNGITVTRRYIFQRGKYT 179 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY-SDIE 238 I V N S +++R + G + QK D Sbjct: 180 IDIEQEVQNASAAPWSAYQYTQLLRGEENKTGGLAGQVAYIGGAIYSPDDKYQKISFDEM 239 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + + N W+ + Y+ + +P + +F G + S+ TI P Sbjct: 240 QEQALDRTVQNGWVAMVQHYFLAAMVPPRG--MTERFYSRIVGGDLFSLGMSSPWQTIQP 297 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G+S T L+ G K+ + E+ +D+G F IAKPMF+++S+F+ +VG Sbjct: 298 GQSGTFQTQLYLGPKDQERMASVAS-----GLELTVDYGIFTIIAKPMFVVLSWFHAVVG 352 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G AI+ TV +K +FF L++ Y S A M+ +QP++ +L+E+F Q + + ++ L Sbjct: 353 NWGWAIVFLTVLIKAVFFKLSETSYRSMARMRKLQPRMQQLKEQFGD-DRQRMNQELMTL 411 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF W++DL+A DP Sbjct: 412 YKREKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFILWLRDLSAPDPYY------ 465 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 + PIIM L+M Q +++P P D Q I+ +MPVVF FP GL Sbjct: 466 -------------VLPIIMGLTMLAQQRLNPAPMDPIQQKIMLFMPVVFTGFFLFFPGGL 512 Query: 539 IIYWSWSNVISIVQQAVIMKM 559 ++Y++ +N +SI+QQ +I + Sbjct: 513 VLYYTVNNSLSILQQWLITRR 533 >gi|152998480|ref|YP_001343315.1| 60 kDa inner membrane insertion protein [Marinomonas sp. MWYL1] gi|189036353|sp|A6W3V1|OXAA_MARMS RecName: Full=Inner membrane protein oxaA gi|150839404|gb|ABR73380.1| 60 kDa inner membrane insertion protein [Marinomonas sp. MWYL1] Length = 551 Score = 355 bits (911), Expect = 1e-95, Method: Composition-based stats. Identities = 149/581 (25%), Positives = 251/581 (43%), Gaps = 49/581 (8%) Query: 1 MERNWNYFV-AIALS-VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD-------N 51 M+ + A+ +S ++ W Y + + ++ D Sbjct: 1 MDFRRYFLWGALFISGYLLFLQWSQDYGPQSTQSVAQSTQSQSETNSQMSDDLPMATQST 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + A I ++ +E+ +L +IN G + L Y ++ P V L Sbjct: 61 TEANAEIPQSVTKIAPGKLIEVTTDTLRVAINPVGGDLVEAALLQYKKELGQPDPFVIL- 119 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNIL 167 ++ Y + V P V+ + + L + +A + Sbjct: 120 -EDGSERTYVTQSGLVGQDGPDASPEGRPVYQSEKTAYTLADGENSLDVNLYYTDAKGVK 178 Query: 168 FERTI-SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIA 222 + +T + Y + + TV N S + R + +I R + G Sbjct: 179 YTKTFRFMKGKYRIRQLITVDNTSSNTWRGNLFAQIKRDNTPDPSKATSMGLQPYLGGAI 238 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + +SD+++ I + W+ + Y+ S +IP + Q + D + Sbjct: 239 SDEQTKYTKVSFSDMKEDPIKTT-TTKGWVAVLQHYFVSAWIPEQGQKVTLQARTNGDFN 297 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 F+ + I PGK T ++ + G K + ++ ++ +D+GW +++ Sbjct: 298 ---IIGFTGTSVEIAPGKQGTLSSTFYVGPKLQDHLESTAEN-----LDLTVDYGWLWWL 349 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+F L++ + V N+GIAI+L V VK +FF L+ Y S A M+ P+I +L+EK Sbjct: 350 AKPLFWLLTLIQSFVINWGIAIILIVVCVKAIFFKLSAASYRSMAKMRKFGPEIAKLKEK 409 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q + + M+ LYK INPL GC PIL+Q+PVF ++Y V+ S+E+RHAPF+ WI Sbjct: 410 YGD-DRQKMSQEMMALYKKEKINPLGGCLPILVQMPVFLSLYWVLMESVELRHAPFFLWI 468 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ DP I PI+M +SMF+Q ++P P D QA I+ Sbjct: 469 HDLSVMDPYF-------------------ILPILMGISMFVQQSLNPTPPDPMQARIMKI 509 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 MPV F FPAGL++YW +N +SI+QQ VI K E Sbjct: 510 MPVAFSIFFLWFPAGLVLYWVTNNTLSILQQYVITKRIENE 550 >gi|229524907|ref|ZP_04414312.1| OxaI/YidC membrane insertion protein [Vibrio cholerae bv. albensis VL426] gi|229338488|gb|EEO03505.1| OxaI/YidC membrane insertion protein [Vibrio cholerae bv. albensis VL426] Length = 541 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 139/570 (24%), Positives = 245/570 (42%), Gaps = 41/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPVQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + + L SI+ G L Y +++S V L + + + Sbjct: 60 ---VAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ + I Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRG 174 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y +V V NNS + + ++ + N G D + + Sbjct: 175 SYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234 Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S + +W+ + Y+AS +IP E + +++ Sbjct: 235 DMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQTQLYSRVINNLGD---MGIRTPNK 291 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 292 TIANGDKAEFEATLWVGPKLQEQMAAVA-----PHLDLVVDYGWLWFIAKPLHWLLSVIQ 346 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++V N+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 347 SVVINWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|70733513|ref|YP_263288.1| putative inner membrane protein translocase component YidC [Pseudomonas fluorescens Pf-5] gi|123651831|sp|Q4K395|OXAA_PSEF5 RecName: Full=Inner membrane protein oxaA gi|68347812|gb|AAY95418.1| inner membrane protein, 60 kDa [Pseudomonas fluorescens Pf-5] Length = 566 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 143/587 (24%), Positives = 243/587 (41%), Gaps = 54/587 (9%) Query: 2 ERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQ---------TVKQPNQV 49 + +AL S ++V W Y + N T + + Sbjct: 1 MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVASSTTAPGLPDAPTGTSAANDDI 60 Query: 50 DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + + A + +++K L +++ +G L L Y Sbjct: 61 PRAASDTTAPAEAPVAASKDLIQIKTDVLDLAVDPQGGDIAQLRLPLYPRRQDHPEIPFQ 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANN 165 L + + Y A+ + + P +++ + L F Sbjct: 121 LF-DNGNERTYLAQSGLIGSNGPDASPAGRPIYSAEKKSYQLADGQDQLVVDLKFSKDGV 179 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGFI 221 +R Y + + N S + ++ R +++ G Sbjct: 180 NYIKRFTLKRGLYDITVSYLIDNESAQPWTGAMFAQLKRDASSDPSSSTATGTATYLGAA 239 Query: 222 AVLGDKSLVEQKYSDIEKSSISN------FHESNSWLGISDKYWASVFIPSKETSFHSQF 275 + + D++K + + W+ Y+ + +IP K + Sbjct: 240 LWTSSEPYKKVSMKDMDKVNEDKSKAPITENVQGGWVAWLQHYFVTAWIPPKGENNQVLA 299 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + S G Y ++ +T+ PG T+ L+AG K + P E+ +D Sbjct: 300 RKDSKG--NYIIGYTGPSMTVAPGAKAETSAILYAGPKSQAVLKELS-----PGLELTVD 352 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G+ +FIA+P+F L+ + ++LVGN+G +I+ T+ +K +FFPL+ Y S A M+ + PK Sbjct: 353 YGFLWFIAQPIFWLLQHIHSLVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPK 412 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + L+EKF Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR Sbjct: 413 LAALKEKFGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQ 471 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 APF WI DL+ DP I PIIM +MFIQ +++P P D Sbjct: 472 APFMLWITDLSIKDPFF-------------------ILPIIMGATMFIQQQLNPTPPDPM 512 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 513 QAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKIEA 559 >gi|312964014|ref|ZP_07778485.1| preprotein translocase YidC subunit [Pseudomonas fluorescens WH6] gi|311282049|gb|EFQ60659.1| preprotein translocase YidC subunit [Pseudomonas fluorescens WH6] Length = 567 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 146/589 (24%), Positives = 246/589 (41%), Gaps = 56/589 (9%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL S ++V W Y + N + T + AA Sbjct: 1 MDI-KRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVAANAVPTGLPDAASGTNTAASD 59 Query: 58 IDDRAQ----------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 RA + + +++K L +I+ +G L L Y Sbjct: 60 DIPRAAGETKAPAEVAVATSTDLIQIKTDVLDLAIDPQGGDVAKLTLPLYPRRQDHPEIP 119 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNA 163 L + + Y A+ + T +++ + L F Sbjct: 120 FQLF-DNGGERVYQAQSGLIGTNGPDASAAGRPIFSSEKKSYQLADGQDQLVVDLKFSKD 178 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEG 219 +R Y + + N S + ++ R +++ G Sbjct: 179 GVNYIKRFTLKRGLYDIVVTYLIDNQSAQPWTGAMFAQLKRDASSDPSSSTATGTATYLG 238 Query: 220 FIAVLGDKSLVEQKYSDIEK------SSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 + + D++K + ++ + W+ Y+ + +IP + Sbjct: 239 AALWTSSEPYKKVSMKDMDKVAEDKLKAPITYNVNGGWVAWLQHYFVTAWIPQPGQNNAV 298 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + S G Y ++ +T+ PG T+ L+AG K + P E+ Sbjct: 299 LARKDSKG--NYIIGYTGPAMTVAPGAKAETSATLYAGPKSQAVLKELS-----PGLELT 351 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G +FIA+P+F L+ + +++VGN+G +I+ T+ +K LFFPL+ Y S A M+ + Sbjct: 352 VDYGILWFIAQPIFWLLQHIHSIVGNWGWSIIFLTMLIKGLFFPLSAASYKSMARMRAVA 411 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EM Sbjct: 412 PKLAALKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEM 470 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R APF WI DL+ DP I PIIM +MFIQ +++P P D Sbjct: 471 RQAPFMLWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPD 511 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP++F F FPAGL++YW +NV+SI QQ I + A Sbjct: 512 PMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNVLSISQQWYITRKIEA 560 >gi|229593497|ref|YP_002875616.1| putative inner membrane protein translocase component YidC [Pseudomonas fluorescens SBW25] gi|259515713|sp|C3K1G2|OXAA_PSEFS RecName: Full=Inner membrane protein oxaA gi|229365363|emb|CAY53750.1| putative inner membrane protein [Pseudomonas fluorescens SBW25] Length = 560 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 148/579 (25%), Positives = 244/579 (42%), Gaps = 50/579 (8%) Query: 2 ERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 + +AL S ++V W Y + N + N+ +A Sbjct: 1 MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVATNQAAPAIPDTPLGNNASASAD 60 Query: 59 DDRAQALSMSPR----------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A + +P + +K L +I+ +G L L Y Sbjct: 61 VPSANGETSAPLETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPF 120 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNAN 164 L + + Y A+ T V++ + L F Sbjct: 121 QLF-DNGGERTYLAQSGLTGTNGPDARATGRPVYSTEQKTYQLADGQNQLNVDLKFSLDG 179 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGF 220 +R Y K+ + N S + ++ R +++ G Sbjct: 180 VNYIKRFSFTRGLYDLKVTYLIDNESGKPWSGNLFAQLKRDASSDPSSSTATGTATYLGA 239 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 ++ + DI+K S+ W+ Y+ + +IP+K + Q + D Sbjct: 240 ALWTSNEPYKKVSMKDIDKGSLKET-VQGGWVAWLQHYFVTAWIPNKGDANLVQTR--KD 296 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y F+ +T+ PG T+ L+AG K + P E+ +D+G+ + Sbjct: 297 SQGNYIIGFTGPALTVAPGAKAETSATLYAGPKSQAVLKELS-----PGLELTVDYGFLW 351 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + +++VGN+G +I+ T+ +K +FFPL+ Y S A M+ + PK+ L+ Sbjct: 352 FIAQPIFWLLQHIHSIVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAALK 411 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR APF Sbjct: 412 EQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFML 470 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 471 WITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAKVM 511 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 MP++F F FPAGL++YW +NV+SI QQ I + Sbjct: 512 KMMPIIFTFFFLWFPAGLVLYWVVNNVLSISQQWYITRK 550 >gi|332288922|ref|YP_004419774.1| putative inner membrane protein translocase component YidC [Gallibacterium anatis UMN179] gi|330431818|gb|AEC16877.1| putative inner membrane protein translocase component YidC [Gallibacterium anatis UMN179] Length = 540 Score = 355 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 147/566 (25%), Positives = 246/566 (43%), Gaps = 37/566 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + IAL I +Q + + + + QT ++V + + Sbjct: 1 MDSRRSLLVIALLFISFLIYQQWEIDNNPQP---AQTATQTQVDKSEVPTTVSTAANTTI 57 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + L++ L I+ G + L Y ++ S +P L + + Y Sbjct: 58 DNNQQQGKIITLQSDVLRLKIDTLGGDIVEAQLLKYGAELHSETPFALL--KNTPQQVYI 115 Query: 122 AELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISLDEHY 178 A+ + + + + F + Y Sbjct: 116 AQSGLIGANGSDTVAGRADYQVEGDNFTLAEGQNELSVPFTFTKDGVTYRKIFTLSRNSY 175 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 K+ VTNNS I+ P ++ +++ N A ++ ++ + Sbjct: 176 DVKVNYEVTNNSGATIQVQPYAQLKHTLVESSGNIAMPTYTGGAYSSSETNYKKYSFEDM 235 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + W I Y+ S +IP+++ D F +I Sbjct: 236 QKENLAIKTKQGWAAILQHYFVSAWIPNQDADNQLYTSTQGDFA---YIGFRGPVTSIAN 292 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G + T ++ L+ G K + P ++ +D+GW +FIAKP+F L+ + +LV Sbjct: 293 GATDTISSQLWVGPKLQNEMETVA-----PHLDLTVDYGWAWFIAKPLFWLLQFIQSLVH 347 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+RE+F Q + + M++L Sbjct: 348 NWGLAIIGVTIVVKAILYPLTKAQYTSMAKMRMLQPKIQEMRERFGD-DRQRMSQEMMKL 406 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 YKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY------ 460 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 I P++M SMF+ KMSP P AD Q ++ +MPV+F F FP+G Sbjct: 461 -------------ILPLLMGASMFLLQKMSPTPVADPMQQKVMMFMPVMFTFFFLWFPSG 507 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563 L++YW SN+I+IVQQ +I + + Sbjct: 508 LVLYWLVSNLITIVQQQLIYRGLEKK 533 >gi|327482918|gb|AEA77325.1| Inner membrane protein translocase component YidC, long form [Vibrio cholerae LMA3894-4] Length = 541 Score = 355 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 140/570 (24%), Positives = 243/570 (42%), Gaps = 41/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQAIQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + + L SI+ G L Y +++S V L + + + Sbjct: 60 ---VAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ + I Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRG 174 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y +V V NNS + + ++ + N G D + + Sbjct: 175 SYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234 Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S + +W+ + Y+AS +IP E + +++ Sbjct: 235 DMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 292 TITNGDKAEFEATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQ 346 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 347 TFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|330812749|ref|YP_004357211.1| Sec protein secretion system, subunit YidC [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380857|gb|AEA72207.1| Putative Sec protein secretion system, subunit YidC [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 560 Score = 355 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 149/582 (25%), Positives = 247/582 (42%), Gaps = 50/582 (8%) Query: 2 ERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 + +AL S ++V W Y + N N V N+ A+ Sbjct: 1 MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVAASNTAPSLPDAPVGNNAASNDD 60 Query: 59 DDRAQALSMSP----------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 RA + + +P +++K L +I+ +G L L Y Sbjct: 61 IPRAASDTSAPAEAPVAVSKDLIQIKTDVLELAIDPQGGDVAQLKLPLYPRRQDHPEIPF 120 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNAN 164 L + + Y A+ + T P +++ + L F Sbjct: 121 QLF-DNGNERTYLAQSGLIGTNGPDSNPAGRPIYSAEKKTYQLADGQDQLVVDLKFSKDG 179 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGF 220 +R Y + + N S + ++ R +++ G Sbjct: 180 VNYIKRFTLKRGLYDVTVSYLIDNQSAQPWSGAMFAQLKRDASSDPSSSTATGTATYLGA 239 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + D++K + W+ Y+ + +IP K S Q + S Sbjct: 240 ALWTSSEPYKKVSMKDMDKGPLKET-VQGGWVAWLQHYFVTAWIPQKGDSNVVQTRKDSK 298 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 G + ++ +T PG T+ L+AG K + P E+ +D+G+ + Sbjct: 299 G--NFIIGYTGPTLTAAPGAKAETSAILYAGPKSQAVLKELS-----PGLELTVDYGFLW 351 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P+F L+ + +++VGN+G +I+ T+ +K LFFPL+ Y S A M+ + PK+ L+ Sbjct: 352 FIAQPIFWLLQHIHSIVGNWGWSIIFLTMLIKGLFFPLSAASYKSMARMRAVAPKLAALK 411 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ Q + ++M++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR APF Sbjct: 412 EQHGD-DRQKMSQSMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFML 470 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PIIM +MFIQ +++P P D QA ++ Sbjct: 471 WITDLSIKDPFF-------------------ILPIIMGATMFIQQQLNPTPPDPMQAKVM 511 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++F F FPAGL++YW +NV+SI QQ I + A Sbjct: 512 KMMPIIFTFFFLWFPAGLVLYWVVNNVLSITQQWYITRKIEA 553 >gi|149190488|ref|ZP_01868759.1| putative inner membrane protein translocase component YidC [Vibrio shilonii AK1] gi|148835742|gb|EDL52708.1| putative inner membrane protein translocase component YidC [Vibrio shilonii AK1] Length = 540 Score = 355 bits (909), Expect = 2e-95, Method: Composition-based stats. Identities = 144/570 (25%), Positives = 246/570 (43%), Gaps = 42/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + I L+++ +Q + Y + ++ T+ P+ D A Sbjct: 1 MDSQRN-ILLIGLALVSFLLFQQWQSYKNPAPVPTQQTQSSTLPAPSFADEHDPAPGQSQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L IN G L Y ++ S+ P L + + Sbjct: 60 TAA----EKIITVKTDVLTLGINTVGGDVVTAKLNEYATELESSEPFELLKDDQG--HQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V S + + + + + F+ + I Sbjct: 114 IAQSGLVGPQGIDLSSTSRPAYTVSADSFTIADGQDELRVPMTFEANGISYTKTFILKRG 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 +Y + V NNS F + ++ + T G D + + Sbjct: 174 NYAIDVEYDVDNNSGQNATFGMYAHLRQNLQDKGGSITMPTYNGGAYSTQDVRYKKYSFE 233 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S W + Y+A+ +IP + + + + + Sbjct: 234 DMQDRNLSLNLTDGQGWAAMIQHYFAAAWIPREAPGTNLYTRVIGNLGD---IGVRMPNA 290 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G+S T L+AG K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 291 TIADGQSATLKATLWAGPKLQKQMAETA-----PNLDLVVDYGWLWFIAKPLHTLLSFIQ 345 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +V N+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 GIVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 405 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLW 505 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + + Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYRALEKK 535 >gi|187479885|ref|YP_787910.1| putative inner membrane protein translocase component YidC [Bordetella avium 197N] gi|123513533|sp|Q2KTI5|OXAA_BORA1 RecName: Full=Inner membrane protein oxaA gi|115424472|emb|CAJ51026.1| inner-membrane protein insertion factor [Bordetella avium 197N] Length = 559 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 148/587 (25%), Positives = 253/587 (43%), Gaps = 54/587 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51 M+ + + S ++ W N+ + P E+ N Q P Sbjct: 1 MDI-RRTVLWMIFSFSLLLLWNNWQIHNGQPALFGGPSPEQNAPATANNQAATNPASNTP 59 Query: 52 SYAAVLID---------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + A A + + V + L + + GAQ L Y Sbjct: 60 AVPNAPAATSAPSSVPGSTAPAPAQAQEVVITTDVLRLTFSSTGAQIIRAELLKYPATAG 119 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 S+ P+V L + Y A+ + N + ++ ++ ++ Sbjct: 120 SDQPMVLL--DRSAGLTYTAQTGVIGAGQNFPTHLTPFAVTTNERELTGDKLVVRFEAES 177 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGF 220 + + Y + VTN S ++ R P ++ + G Sbjct: 178 GGLRVIKTFTLDRGSYDVHVRHDVTNVGTAAQHPSVYLQLERDGNDPAGTSSFYHTFTGV 237 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + +SDI K+ S + N W+GI Y+A+ ++P + T + L Sbjct: 238 AVYSEQDKFQKVTFSDIAKNKASYIKQADNGWIGIVQHYFATAWVPKEGTPRTNDLLQLQ 297 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 +A + PG ++++ L+ G ++ + P E+++D+GW Sbjct: 298 PNLFAARA--IEALGEVAPGATVSSDAQLWVGPQDQQAMAAVA-----PGLELVVDYGWL 350 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 IAKP+F LM++ ++L+GN+G I+ TV +K +F+PLA Y S A MK + P++ L Sbjct: 351 TIIAKPLFTLMTWLHSLLGNWGWTIVALTVIIKAVFYPLASASYRSMARMKQVAPRLQAL 410 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +EK+ Q L +AM+++Y+T INPL GC P+++QIPVF A+Y V+ S+EMR AP+ Sbjct: 411 KEKYGD-DRQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAPWI 469 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+ DP I P +M +MF+Q+K++P P D QA + Sbjct: 470 LWIHDLSVRDPYF-------------------ILPAVMMATMFLQIKLNPTPPDPVQAKV 510 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK---MHGAE 563 + MP+VF + FPAGL++YW +N +SI+QQ I + A+ Sbjct: 511 MMVMPLVFGGMMFFFPAGLVLYWCVNNTLSILQQWSITRSITRQTAK 557 >gi|52424536|ref|YP_087673.1| putative inner membrane protein translocase component YidC [Mannheimia succiniciproducens MBEL55E] gi|81691469|sp|Q65VC2|OXAA_MANSM RecName: Full=Inner membrane protein oxaA gi|52306588|gb|AAU37088.1| YidC protein [Mannheimia succiniciproducens MBEL55E] Length = 540 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 138/570 (24%), Positives = 257/570 (45%), Gaps = 44/570 (7%) Query: 1 MERNWNYF--VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + + +S ++ WQ Y P+ + + P ++ V Sbjct: 1 MDSRRSLLVLALLFISFLVYEQWQMDYNTPKPVATEQAQAVSSNAEMPASTSSTEGTV-- 58 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 ++ + ++N ++ G + +L Y +++S++ + L N N Sbjct: 59 ----DNVAQGKIISIQNDVFTLKVDTLGGDVVESSLTNYAAELNSDARFILL---QNKPN 111 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILFERTISLD 175 + + N I+ + + + + +L + +++ + + Sbjct: 112 EVYVAQSGLIGKNGIDTKAGRAAYQVEAEQFTLADGQNELRVPLTLEKDGVIYRKVFVIK 171 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 Y ++ + N + + I P G++ Q++ + A + ++ Sbjct: 172 AGSYDIEVNYEIQNQTNEAIEVQPYGQLKHTLVQSSGSMAMPTYTGGAYSSADTNYKKYS 231 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D K + W+ + Y+ S +IP+++ + + + Sbjct: 232 FDEMKDKNLSIDTKAGWVAVLQHYFVSAWIPNQDADNQLYTSTANG---LGFIGYRGPVV 288 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 + G S T + L+ G K + ++ +D+GW +FIAKP+F L++ Sbjct: 289 NVPAGGSETIKSALWTGPKLQNEMGAVAN-----HLDLTVDYGWAWFIAKPLFWLLNVIQ 343 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + Sbjct: 344 SIVSNWGLAIIGVTIVVKGILYPLTKAQYTSMAKMRMLQPKLQEMRERFGD-DRQRMSQE 402 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC P+L+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 403 MMKLYKEEKVNPLGGCLPLLIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY-- 460 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I PI+M SMF+ KMSP P AD Q I+N+MP++F+ Sbjct: 461 -----------------ILPILMGASMFLLQKMSPTPVADPMQQKIMNFMPLIFMVFFLW 503 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW SN+I+IVQQ +I + + Sbjct: 504 FPAGLVLYWLVSNIITIVQQQLIYRGLEKK 533 >gi|91777106|ref|YP_546862.1| protein translocase subunit yidC [Methylobacillus flagellatus KT] gi|122399286|sp|Q1GXL6|OXAA_METFK RecName: Full=Inner membrane protein oxaA gi|91711093|gb|ABE51021.1| protein translocase subunit yidC [Methylobacillus flagellatus KT] Length = 552 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 147/568 (25%), Positives = 255/568 (44%), Gaps = 38/568 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + S I+ W ++ + + + Q+V+ + + ++ ++ Sbjct: 1 MDTKRLILFVIFSFSILMLWDSWQRDQQPPAASQTQTTAQSVEDGSVPQAAKSSASAANQ 60 Query: 62 AQALSM-------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 A + + R+ ++ SI+ G L LR + D V L+ Sbjct: 61 ASVPAETGFRLQSAERINVETDLYKASIDTIGGDLRRLELREHKDDEDQTKNFV-LMDDQ 119 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 + Y A+ + + ++L +K N + + + Sbjct: 120 SAPMLYVAQTGLIGNGLPTHKEVFTSESTNYQLAPGEDKLDVRLTWKGDNGVEVHKIYTF 179 Query: 175 D-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-PQTATNTFGVQEGFIAVLGDKSLVEQ 232 + Y ++ + NNS + S +I+ + G + Sbjct: 180 RRDSYAIEVSYEIRNNSDTAVDPSVYYQIVHDNQSHQGSYMMPTFTGGAYYTEADKYKKL 239 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 +SD+ K+++S S+ W+G+ Y+ S +IP +F Y + Sbjct: 240 SFSDMAKTNLSKN-ASDGWVGLVQHYFVSAWIPEDG--LVREFYTKKLSDNVYSIGSVSP 296 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 I PG+S+T + L+AG + + P E +D+GW IA P+F ++S Sbjct: 297 LGNIAPGQSVTLKSRLYAGPQTQSELKSVA-----PGLEYTVDYGWLTVIATPLFWILSS 351 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +V N+G+AI+L T+ +KL+F+PL+ Y S ANM+ + P++ L+E++ Q L Sbjct: 352 IQKVVHNWGVAIILLTILIKLVFYPLSAASYRSMANMRELAPRLQRLKEQYGD-DRQKLH 410 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 +AM+++YKT INP+ GC PIL+QIPVF A+Y V+ S+EMRHAPF WI+DL+A DP Sbjct: 411 QAMMEMYKTEKINPMGGCLPILVQIPVFIALYWVLLGSVEMRHAPFMLWIQDLSAVDPYY 470 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 + PI+M ++M IQ K++P PAD QA ++ MP+VF Sbjct: 471 -------------------VLPILMGITMIIQTKLNPKPADPIQAKVMTIMPIVFSVFFF 511 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMH 560 FPAGL++YW +N++SI QQ I + Sbjct: 512 FFPAGLVLYWLVNNILSIAQQWYINRST 539 >gi|258626076|ref|ZP_05720927.1| inner membrane protein, 60 kDa [Vibrio mimicus VM603] gi|258581602|gb|EEW06500.1| inner membrane protein, 60 kDa [Vibrio mimicus VM603] Length = 539 Score = 354 bits (907), Expect = 3e-95, Method: Composition-based stats. Identities = 141/570 (24%), Positives = 243/570 (42%), Gaps = 43/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPSQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + + L SI+ G L Y ++ S V L + + + Sbjct: 60 AA-----AKTITVTTDVLTLSIDTIGGDIVTAKLNQYSEELDSAESFVLLQNTQG--HQF 112 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ + I Sbjct: 113 IAQSGLVGPQGIDVTSNNRPAYQVSADSFSLAEGQDELRIPMTYQANGIDYTKTFILKRG 172 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y +V V NNS + + ++ + N G D + + Sbjct: 173 SYAVDVVFDVANNSGNAATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 232 Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S + +W + Y+AS +IP E + +++ Sbjct: 233 DMKDRNLSAPNDVTVNWAAMIQHYFASAWIPRNEPQAQLYSRVINNLGD---IGIRTPNK 289 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 290 TIANGDKAEFEATLWVGPKLQDQMAAVA-----PNLDLVVDYGWLWFIAKPLHWLLSFIQ 344 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 345 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 403 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 404 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 461 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 462 -----------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 504 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 505 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 534 >gi|28872711|ref|NP_795330.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato str. DC3000] gi|38502973|sp|Q87TS1|OXAA_PSESM RecName: Full=Inner membrane protein oxaA gi|28855967|gb|AAO59025.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato str. DC3000] Length = 562 Score = 353 bits (906), Expect = 4e-95, Method: Composition-based stats. Identities = 147/585 (25%), Positives = 242/585 (41%), Gaps = 53/585 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N N N+ +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASA 59 Query: 58 IDDRAQ------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A A++ + +K L +I+ G L L Y Sbjct: 60 DVPSATGNTTSAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPD 119 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFK 161 L + + + A+ T + V++ + ++L F Sbjct: 120 VPFQLF-DNGGERTFLAQSGLTGTNGPDARASGRPVYSSAQKSYQLADGQDSMVVELKFS 178 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQ 217 +R Y + V N S + ++ R Sbjct: 179 ENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATY 238 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 G + + DI+K I W+ Y+ + +IP + Q + Sbjct: 239 LGAALWTAAEPYKKVSMKDIDKGQIKEN-VQGGWVAWLQHYFVTAWIPDHNVTNAVQTR- 296 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 D Y F++ +++ PG TT L+AG K + P E+ +D+G Sbjct: 297 -KDSQGNYIIGFTSPTLSVAPGAQGETTATLYAGPKSQAVLKELS-----PGLELTVDYG 350 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 FLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLA 410 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP Sbjct: 411 VLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAP 469 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DL+ DP I PIIM +MFIQ +++P P D QA Sbjct: 470 WILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQA 510 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP++F F FPAGL++YW +N +SI QQA I + GA Sbjct: 511 KVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIGA 555 >gi|104784447|ref|YP_610945.1| putative inner membrane protein translocase component YidC [Pseudomonas entomophila L48] gi|123079038|sp|Q1I2H4|OXAA_PSEE4 RecName: Full=Inner membrane protein oxaA gi|95113434|emb|CAK18162.1| Preprotein translocase subunit YidC [Pseudomonas entomophila L48] Length = 561 Score = 353 bits (904), Expect = 5e-95, Method: Composition-based stats. Identities = 143/584 (24%), Positives = 240/584 (41%), Gaps = 52/584 (8%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL S ++V W Y + N + + A Sbjct: 1 MDI-KRTILIVALAIVSYVMVLKWNQDYGQAALPTQNTAASTANASLPDSVPAGNNGANA 59 Query: 58 IDDRAQALS------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A + +++K L +I+ G L L + Sbjct: 60 DLPSVNAQNGTTGLAPAPVAVSKDLIQVKTDVLNLAIDPVGGDIVQLTLPKFPRRQDHPE 119 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKN 162 L + + Y A+ + T L L F Sbjct: 120 IPFQLF-DNGGERVYLAQSGLIGTDGPDRASGRPLYATEQKSYQLADGQDQLVVDLKFSE 178 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QE 218 +R Y + + N S + ++ R +++ Sbjct: 179 NGVNYIKRFSLKRGEYDLTVSYLIDNQSAQAWSGNMFAQLKRDASSDPSSSTATGTATYL 238 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G + + D++K + + W+ Y+ + +IPSK + Q + Sbjct: 239 GAALWTASEPYKKVSMKDMDKGGLQEN-VAGGWVAWLQHYFVTAWIPSKSDNNAVQTR-- 295 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 D Y ++ + + G + T+ L+AG K + P E+ +D+G+ Sbjct: 296 KDSQGNYIIGYTGPALNVPAGGKVETSAMLYAGPKIQSKLKELS-----PGLELTVDYGF 350 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +FIA+P+F L+ + ++L+GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ + Sbjct: 351 LWFIAQPIFWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAQ 410 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+E+F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ Sbjct: 411 LKERFGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPW 469 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DL+ DP I PIIM +MFIQ +++P P D QA Sbjct: 470 MLWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQAK 510 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 511 VMKMMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRSIEA 554 >gi|229517141|ref|ZP_04406587.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC9] gi|229346204|gb|EEO11176.1| OxaI/YidC membrane insertion protein [Vibrio cholerae RC9] Length = 541 Score = 353 bits (904), Expect = 5e-95, Method: Composition-based stats. Identities = 140/570 (24%), Positives = 242/570 (42%), Gaps = 41/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V ++ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + + L SI+ G L Y +++S V L + + + Sbjct: 60 ---VAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQF 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V N+ + + + I + ++ + I Sbjct: 115 IAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRG 174 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y +V V NNS + + ++ + N G D + + Sbjct: 175 SYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFD 234 Query: 236 DIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S + +W+ + Y+AS +IP E + +++ Sbjct: 235 DMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNK 291 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 292 TIANGDKAEFEATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQ 346 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 347 TFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 405 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 406 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 463 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P+ M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 464 -----------------ILPLQMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLW 506 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 507 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536 >gi|330961501|gb|EGH61761.1| membrane protein insertase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 562 Score = 353 bits (904), Expect = 7e-95, Method: Composition-based stats. Identities = 146/585 (24%), Positives = 240/585 (41%), Gaps = 53/585 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N N N+ +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASA 59 Query: 58 IDDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A A + S + +K L +I+ G L L Y Sbjct: 60 DVPSATANTTSAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPD 119 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFK 161 L + + + A+ T V++ + ++L F Sbjct: 120 VPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYSSAQKTYQLADGQDSMVVELKFS 178 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQ 217 +R Y + V N S + ++ R Sbjct: 179 ENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATY 238 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 G + + DI+K I W+ Y+ + +IP + Q + Sbjct: 239 LGAALWTAAEPYKKVSMKDIDKGQIKET-VQGGWVAWLQHYFVTAWIPDHNATNQVQTR- 296 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 D Y F++ +++ PG T+ L+AG K + P E+ +D+G Sbjct: 297 -KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDYG 350 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 FLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLA 410 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP Sbjct: 411 LLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAP 469 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DL+ DP I PIIM +MFIQ +++P P D QA Sbjct: 470 WILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQA 510 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 KVMKLMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 555 >gi|293602692|ref|ZP_06685133.1| Oxa1 family cytochrome oxidase biogenesis protein [Achromobacter piechaudii ATCC 43553] gi|292818883|gb|EFF77923.1| Oxa1 family cytochrome oxidase biogenesis protein [Achromobacter piechaudii ATCC 43553] Length = 559 Score = 353 bits (904), Expect = 7e-95, Method: Composition-based stats. Identities = 144/588 (24%), Positives = 249/588 (42%), Gaps = 49/588 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKN-----IQTVKQP 46 M+ + + S ++ W N+ + P E + +V Sbjct: 1 MDI-RRTVLWMIFSFSLLLLWNNWQIHNGKPSLFGGPTPAASTAEPQAGANNATPSVPSA 59 Query: 47 NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + + + A A + S V + L + + GAQ L Y + P Sbjct: 60 PTTTATAPSAVPGATAPAAARSEEVVVTTDVLRLTFDTMGAQLVRAELLKYPATGQPDKP 119 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNAN 164 V L + Y + V N P T + + S + + ++ Sbjct: 120 TVLL--DRSAGLNYVVQSGVVGAPNGQSFPTHQTPFRVTSSERQLTGDNLVVSFEGESGG 177 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIA 222 + + Y + + N + + ++ R P ++ + GF Sbjct: 178 VKVTKTFTLHKGRYDIDVRHDLANVGSAPVTPALYLQLERDGNDPADTSSFYHTFTGFAV 237 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 + +SDIEK + + N W+ + Y+A+ ++P + ++ + Sbjct: 238 YSEQDKFQKSTFSDIEKKKANYIKQADNGWIAVVQHYFATAWVPPQGKPRTNELLEVQKN 297 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 Y A+ I PG + + L+ G ++ + P E+++D+GW Sbjct: 298 --LYAARSIEAVGEIAPGSASRVDSHLWVGPQDQKAMAALA-----PGLELVVDYGWLTI 350 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+F LM++ ++L+GN+G I+ TV +K +FFPLA Y S A MK + P++ L+E Sbjct: 351 IAKPLFTLMTWLHSLLGNWGWTIVALTVLIKAIFFPLAAASYRSMARMKQVAPRLQALKE 410 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ Q L AM+++Y+T INPL GC P+++QIPVF ++Y V+ S+EMR AP+ W Sbjct: 411 KYGDDK-QKLNAAMMEMYRTEKINPLGGCLPMVVQIPVFISLYWVLLASVEMRGAPWILW 469 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + DL+ DP I P IM +MF+Q+K++P P D QA ++ Sbjct: 470 VHDLSIRDPYF-------------------ILPAIMMATMFLQIKLNPTPPDPIQAKVMM 510 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 MP+VF + FPAGL++YW +N +SI QQ I + + Sbjct: 511 IMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWSITRSMQRKTEAAAN 558 >gi|189183736|ref|YP_001937521.1| putative inner membrane protein translocase component YidC [Orientia tsutsugamushi str. Ikeda] gi|189180507|dbj|BAG40287.1| 60 kD inner-membrane protein [Orientia tsutsugamushi str. Ikeda] Length = 567 Score = 352 bits (903), Expect = 7e-95, Method: Composition-based stats. Identities = 205/570 (35%), Positives = 330/570 (57%), Gaps = 11/570 (1%) Query: 1 ME-RNW-NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS---YAA 55 M+ N N +AI LS+ I+ W FY PR+ +M+N +K + + + +A Sbjct: 1 MDSDNRLNLILAITLSLAIILGWHFFYEKPRLIKMSNAQKEKIEYNKRSSTNKHLLHESA 60 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + I D+ + S RV++ L GSI+LKG +FDDL L GY DV NSP V LLSPS Sbjct: 61 LKIKDKVDIIDYSTRVKIMTNKLHGSISLKGLRFDDLILVGYKQDVLENSPDVELLSPSE 120 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 T AYFAE+ + N ++ IL + N +N+ F ++S+D Sbjct: 121 TATAYFAEVGWYCAKNADSDFPNSDTLWQTDKSILQANDTTTFTWTNKHNVQFIVSVSID 180 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++Y+F I ++ NNS Q+ G I R+ + + Q ++ L E Y+ Sbjct: 181 DNYMFTINQSIVNNSKQQLAVQFHGLIHRNLAENENSANIFQGPIASIDSY--LNEVTYN 238 Query: 236 DIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN-E 293 +++ +++ + WLGISDKYW + FIP + + + F Y G +YQ F + E Sbjct: 239 KLKEKKHIDYNLNVVHWLGISDKYWLTSFIPDVKYRYSTSFMYGKAGFEKYQVSFLSPKE 298 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + G S++ + LF GAKE + +Y K I F+ ID+GWFY + KP+F +S+F Sbjct: 299 VVNSDGGSLSVVHHLFLGAKEVKLLDYYAKKYNIKLFDRAIDFGWFYILTKPLFYTLSFF 358 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y GNFG++I++ T+ +K++ F + + Y S M+++QP+I L+E + + L + Sbjct: 359 YKYCGNFGVSILIVTILIKIMMFSFSNRSYSSMKKMRDLQPRIQRLQELYGDDKIK-LHQ 417 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 ++ LYK ++ L+Q+P+FF++YKV+ +++EMRHAPF+ WIKDL+A DPT I Sbjct: 418 EIMALYKKEKVSLAGSFLQSLIQLPIFFSLYKVLHVTIEMRHAPFFIWIKDLSALDPTCI 477 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAMILNWMPVVFVFALS 532 F LFG+LPF++P F+++G WPI+ S +M +Q K++ P AD QA +L +MP++ + + Sbjct: 478 FNLFGLLPFHVPWFLNIGAWPILTSATMMLQQKINPAPAADPAQAQVLKFMPLILLIVFN 537 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +FPAGL+IYW+W+N++SIVQQ +I K++ Sbjct: 538 NFPAGLLIYWTWNNILSIVQQFIINKINNK 567 >gi|212712607|ref|ZP_03320735.1| hypothetical protein PROVALCAL_03702 [Providencia alcalifaciens DSM 30120] gi|212684823|gb|EEB44351.1| hypothetical protein PROVALCAL_03702 [Providencia alcalifaciens DSM 30120] Length = 553 Score = 352 bits (903), Expect = 7e-95, Method: Composition-based stats. Identities = 148/574 (25%), Positives = 262/574 (45%), Gaps = 53/574 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + +E + + Q P+ N AV + Sbjct: 1 MDSQRNLLL-IALLFVSFLVWQAWESDKVAQETKAVQVSQQKTDMPSSASNDGQAVTGSE 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L IN +G D+ +L Y ++S P L + Y Sbjct: 60 ------QGKLIAVKTDVLDIRINTRGGDIDEADLLAYPATLNSPDPFRLL--ETTPGFVY 111 Query: 121 FAELDYVST-------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + NN + P + K I + F + N +++++T Sbjct: 112 QAQSGLIGPHGPDNPANNNGQRPLYTSDATSFELKDGQDELRIPMTFTDNNGVVYQKTYI 171 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-------FGVQEGFIAVLG 225 L Y + + N + + + G++ + G Sbjct: 172 LKRGKYTVDVEYNIQNPTAQPLTLAFFGQLKQTIALPEQRDTGSSNFALHTYRGAAYSSD 231 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + + +SDIE ++S W+ + +Y+A+ +IP+ S F + Sbjct: 232 ENNYKKYSFSDIEDKNLSLT-TKGGWVAMLQQYFATAWIPASSEQ--STFYTIDLDKKSA 288 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI + T ++ L+ G + + P ++ +D+GW +FI++P Sbjct: 289 IVGYKSEPLTIASNGAATYSSTLWVGPEIQSEMAEVA-----PHLDLTVDYGWLWFISQP 343 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + + VGN+GIAI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 344 LFKLLKFIHGFVGNWGIAIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGD 403 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK+ +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF+GWI+DL Sbjct: 404 DK-QRMSQEMMALYKSEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFFGWIQDL 462 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I P++M ++MF+ KMSP D Q I+ +MP Sbjct: 463 SAQDPYY-------------------ILPVLMGVTMFVIQKMSPTTVTDPMQQKIMMYMP 503 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 VVF FP+GL++Y+ SN+++I+QQ VI + Sbjct: 504 VVFTVFFLWFPSGLVLYYIVSNLVTIIQQQVIYR 537 >gi|330964185|gb|EGH64445.1| membrane protein insertase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 562 Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats. Identities = 147/585 (25%), Positives = 241/585 (41%), Gaps = 53/585 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N N N+ +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASA 59 Query: 58 IDDRAQ------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A AL+ + +K L +I+ G L L Y Sbjct: 60 DVPSATGNTTSAAPLETPALASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPD 119 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFK 161 L + + + A+ T + V++ + ++L F Sbjct: 120 VPFQLF-DNGGERTFLAQSGLTGTNGPDARASGRPVYSSAQKSYQLADGQDSMVVELKFS 178 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQ 217 +R Y + V N S + ++ R Sbjct: 179 ENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATY 238 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 G + + DI+K I W+ Y+ + +IP + Q + Sbjct: 239 LGAALWTAAEPYKKVSMKDIDKGQIKEN-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR- 296 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 D Y F++ +++ PG TT L+AG K + P E+ +D+G Sbjct: 297 -KDSQGNYIIGFTSPTLSVAPGAQGETTATLYAGPKSQAVLKELS-----PGLELTVDYG 350 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 FLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLA 410 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP Sbjct: 411 VLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAP 469 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DL+ DP I PIIM +MFIQ +++P P D QA Sbjct: 470 WILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQA 510 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 KVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 555 >gi|217970730|ref|YP_002355964.1| hypothetical protein Tmz1t_2331 [Thauera sp. MZ1T] gi|217508057|gb|ACK55068.1| 60 kDa inner membrane insertion protein [Thauera sp. MZ1T] Length = 552 Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats. Identities = 142/569 (24%), Positives = 243/569 (42%), Gaps = 39/569 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT------VKQPNQVDNSYAA 55 + + S +V W + + + V P Sbjct: 1 MDQRRLILFLIFSFSLVMLWDGWIKQNQPPVAQQQAAAGSAAPADGAVPTPTLSATPGQP 60 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 V+ ++A + +PR ++ L ++ +G L L+ + + V LL Sbjct: 61 VVPGEQAAQAAAAPRAVVETDLLRAEVSAQGGDIVRLELKQHKASGEAGGNFV-LLDDGT 119 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL- 174 T++ Y A+ + + K ++L N + + + Sbjct: 120 TRHQYAAQSGLIGEGLPTHKTLFQLPAGELRLKDGENGVELRLQAPEQNGVQVTKVMRFA 179 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT---FGVQEGFIAVLGDKSLVE 231 YL + + N S + ++ R G + Sbjct: 180 RGSYLIDVSYEIRNGSGQALAPHAYFQLTRDGNPAEQVEAFGVTTFTGPAFYTDANKFQK 239 Query: 232 QKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 +++DI + + W+ + Y+ ++P + L G+ + A Sbjct: 240 VQFADITDGDAKFPKTAADGWVAMVQHYFVGAWLPKAGEQREYFARAL--GNNLFSAGVI 297 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 +I G + L+AG +E + P ++++D+GW IA P+F ++ Sbjct: 298 LPVASIATGAEGAVSTRLYAGPQEQDKLEGIA-----PGLDLVVDYGWLTVIAAPLFWVL 352 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 S+F+NL GN+G AI+L TV +K +FFPL+ Y S A M+ + P++ ++E + ++ Sbjct: 353 SWFHNLTGNWGWAIILVTVAIKAIFFPLSAASYKSMAKMRVLGPRLQRMKEMYGNDKAKM 412 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 Q+ M+ LY+T INPL GC PIL+QIPVF A+Y V+ S+EMRHAP+ GWI+DL+A DP Sbjct: 413 -QQEMMNLYRTEKINPLGGCLPILVQIPVFIALYWVLLGSVEMRHAPWLGWIQDLSAKDP 471 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I PIIM +SM +QMK++P P D QA ++ MP++F F Sbjct: 472 YF-------------------ILPIIMGVSMLVQMKLNPTPPDPIQAKVMMAMPIIFTFM 512 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 FP+GL++YW +N +SI QQ I +M Sbjct: 513 FLWFPSGLVLYWVVNNCLSIAQQWQITRM 541 >gi|146284522|ref|YP_001174675.1| putative inner membrane protein translocase component YidC [Pseudomonas stutzeri A1501] gi|166977401|sp|A4VS82|OXAA_PSEU5 RecName: Full=Inner membrane protein oxaA gi|145572727|gb|ABP81833.1| inner membrane protein, 60 kDa [Pseudomonas stutzeri A1501] Length = 556 Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats. Identities = 143/584 (24%), Positives = 241/584 (41%), Gaps = 49/584 (8%) Query: 1 MERNWNYFVAIALS---VIIVYAWQNFYVYPRIEEMNNERK----------NIQTVKQPN 47 M+ + +AL+ ++V W Y + + + + T N Sbjct: 1 MDI-KRSILLVALAVVAYLMVLQWNQDYGQAALPTETAQSQPAAPALPDSPSATTEGNAN 59 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 V + S + ++ L +I+ +G +L+L Y Sbjct: 60 DVPAVAGQQQASALPTSAPSSQLIRVRTDVLDLAIDPRGGDIVELHLPQYPRRQDRPDVP 119 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIKLVFKNANN 165 L +++ Y A+ + + + + L + Sbjct: 120 FQLF-ERSSERTYEAQSGLIGDGPDKASGRPQYSSEKTEYQLAEGQDALVVDLNYSADGV 178 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIA 222 +R +Y K+ + N S G++ R K P ++T T A Sbjct: 179 NYIKRFTLERGNYALKVNYLIDNQSQQPWTGYLFGQLKRDKSGDPSSSTATGTATYLGAA 238 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + W+ Y+ + +IP + Q + D Sbjct: 239 LWTKDEPYRKVSMSNMDDKNLRETVQGGWIAWLQHYFVTAWIPQAGDTNQVQTR--KDSQ 296 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y F+ +T+ G T L+AG K + P + +D+G +FI Sbjct: 297 GNYIIGFTGPAVTVPAGAQGETGATLYAGPKSQDKLEELS-----PGLRLTVDYGILWFI 351 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A+P+F L+ + L+GN+G +I++ T+ +KL FFPL+ Y S A M+ + PK+ L+E+ Sbjct: 352 AQPIFWLLQNIHALLGNWGWSIIVLTIVIKLAFFPLSAASYRSMARMRAVSPKMQALKEQ 411 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ WI Sbjct: 412 FGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWMFWI 470 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ DP I PIIM ++MFIQ +++P P D QA ++ Sbjct: 471 TDLSIKDPYF-------------------ILPIIMGVTMFIQQQLNPTPPDPMQARVMKL 511 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH--GAEI 564 +P++F F FPAGL++YW +N++SI QQ I + GA+ Sbjct: 512 LPIIFTFFFLWFPAGLVLYWVVNNILSIAQQWYITRQIEAGAKP 555 >gi|327482911|gb|AEA86221.1| putative inner membrane protein translocase component YidC [Pseudomonas stutzeri DSM 4166] Length = 556 Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats. Identities = 143/584 (24%), Positives = 240/584 (41%), Gaps = 49/584 (8%) Query: 1 MERNWNYFVAIALS---VIIVYAWQNFYVYPRIEEMNNE----------RKNIQTVKQPN 47 M+ + +AL+ ++V W Y + + + T N Sbjct: 1 MDI-KRSILLVALAVVAYLMVLQWNQDYGQAALPTETAQGQPAAPALPDSPSATTEGNAN 59 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 V + S + ++ L +I+ +G +L+L Y Sbjct: 60 DVPAVAGQQQASALPTSAPSSQLIRVRTDVLDLAIDPRGGDIVELHLPQYPRRQDRPDVP 119 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK--ILTPTTPIKLVFKNANN 165 L +++ Y A+ + + + + L + Sbjct: 120 FQLF-ERSSERTYEAQSGLIGDGPDKASGRPQYSSEKTEYQLAEGQDALVVDLNYSADGV 178 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIA 222 +R +Y K+ + N S G++ R K P ++T T A Sbjct: 179 NYIKRFTLERGNYALKVNYLIDNQSQQPWTGYLFGQLKRDKSGDPSSSTATGTATYLGAA 238 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + W+ Y+ + +IP + Q + D Sbjct: 239 LWTKDEPYRKVSMSNMDDKNLRETVQGGWIAWLQHYFVTAWIPQAGDTNQVQTR--KDSQ 296 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y F+ +T+ G T L+AG K + P + +D+G +FI Sbjct: 297 GNYIIGFTGPAVTVPAGAQGETGATLYAGPKSQDKLEELS-----PGLRLTVDYGILWFI 351 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A+P+F L+ + L+GN+G +I++ T+ +KL FFPL+ Y S A M+ + PK+ L+E+ Sbjct: 352 AQPIFWLLQNIHALLGNWGWSIIVLTIVIKLAFFPLSAASYRSMARMRAVSPKMQALKEQ 411 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 F Q + +AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+EMR AP+ WI Sbjct: 412 FGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWMFWI 470 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ DP I PIIM ++MFIQ +++P P D QA ++ Sbjct: 471 TDLSIKDPYF-------------------ILPIIMGVTMFIQQQLNPTPPDPMQARVMKL 511 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH--GAEI 564 +P++F F FPAGL++YW +N++SI QQ I + GA+ Sbjct: 512 LPIIFTFFFLWFPAGLVLYWVVNNILSIAQQWYITRQIEAGAKP 555 >gi|68171979|ref|ZP_00545283.1| 60 kDa inner membrane protein [Ehrlichia chaffeensis str. Sapulpa] gi|67998597|gb|EAM85346.1| 60 kDa inner membrane protein [Ehrlichia chaffeensis str. Sapulpa] Length = 585 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 213/585 (36%), Positives = 325/585 (55%), Gaps = 19/585 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ LSV+I+ W+ Y + E P DN Sbjct: 7 MVEVRNLILAVILSVLIMMGWRFIYDKFFTTQHAIEDNTSSDAMIPEIDDN--FIHKTRS 64 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + R++L N + GSI+LKGAQFDDL + YH+ NS + LLSP T+N Y Sbjct: 65 EVIESNTNIRIKLSNEKMNGSISLKGAQFDDLIFKNYHVTPDKNSEGIVLLSPEETENVY 124 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 F E ++ + I +P +++WN L+P PI L + N ++F+ I+LD Y+F Sbjct: 125 FIEFGWIDPQHKITVPTHSSIWNSDQST-LSPNNPITLTWDNKQGVVFKIKITLDNDYMF 183 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 KI VTNN+ I P GRI R K + + EG + G+ +L E Y I K Sbjct: 184 KIEQMVTNNTDSIINLIPYGRINRSKHTAEKSYWISHEGAVGSFGN-TLKEWTYKAITKE 242 Query: 241 SISNFHESNS------WLGISDKYWASVFIPSKETSFHSQFK---YLSDGHARYQAKFSA 291 + + W+GI DKYW + IP+ + F + R+Q FS Sbjct: 243 KNIKIQQQDINDNQNQWIGIGDKYWFTALIPNVSQKSNLNFHVKHAKHNSKDRFQVDFSH 302 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + P ++T+ N+LFAGAKE + Y+ +L I F+ +D+G YFI KP+F+L+ Sbjct: 303 DNYIAHPNNTVTSINYLFAGAKELKLLDTYKDNLNISLFDKAVDFGVLYFITKPVFLLLE 362 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 YF N++GNFG+AI+L T+ +KL+ FPL+ K YVS ++++QP I ++E +K ++ Sbjct: 363 YFNNVIGNFGLAILLLTIVIKLIMFPLSHKSYVSMLKLRHLQPDIVRIKELYKNDNDKM- 421 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 K + ++K +N+NP++G P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL++ D Sbjct: 422 SKEISAIFKKNNVNPMSGFVPVLIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLSSFDTA 481 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFV 528 NI T+FG+L F P + +GI P+I+ ++M IQ K++ DK QA + ++P +F+ Sbjct: 482 NILTIFGLLKFNPP--ICIGILPVILGITMIIQQKLNNHSSLNQDKTQANFMKFLPYIFI 539 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F SSFPAGLIIYW SN I+IVQQ +I + ++ Sbjct: 540 FIFSSFPAGLIIYWICSNSITIVQQLIIKHYVTKKFNFYKTVQQE 584 >gi|209693637|ref|YP_002261565.1| putative inner membrane protein translocase component YidC [Aliivibrio salmonicida LFI1238] gi|254772743|sp|B6EP40|OXAA_ALISL RecName: Full=Inner membrane protein oxaA gi|208007588|emb|CAQ77688.1| inner membrane protein [Aliivibrio salmonicida LFI1238] Length = 541 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 143/571 (25%), Positives = 247/571 (43%), Gaps = 43/571 (7%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N +A+AL S ++ WQ + ++ ++ + P + + Sbjct: 1 MDTQRNILLLALALVSFLLFQQWQVETNPQQPATVSTVQQTHKNGDVP-----TSSTANS 55 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D + + + L ++ G + L Y ++ S + V L + ++ + Sbjct: 56 DAPVDSAQSDKLITITTDVLTLKVDTLGGDIIESVLNKYDAELDSKAKFVLLKNDAD--H 113 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTISLD 175 +Y A+ + + +L L + + I Sbjct: 114 SYIAQSGLIGPQGIDSNTGRAQFTAKKTDYVLADGQNELRIPLTLEKNGITYTKTLIVKR 173 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKY 234 + Y + TV N S + ++ + T G D + + Sbjct: 174 DSYAIDVEYTVNNQSSAPATVEMYANLKQNLLDDGGSLTMPTYRGGAYSTEDTRYKKYSF 233 Query: 235 SDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D+E ++S + W G+ Y+AS +IP + D Sbjct: 234 DDMEDKNLSIDMTNGQGWAGMLQHYFASAWIPRNVNDATLTTRVAGD---YGYIGVRMPS 290 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 +TI G+ T T L+ G K P + K ++ +D+GW +FIA P+ L+S+ Sbjct: 291 VTIPAGQEDTLTATLWTGPKLQPQMAATAK-----YLDLSVDYGWLWFIASPLHKLLSFI 345 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 ++VGN+G+AIM+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 QSIVGNWGLAIMILTFIVRGAMYPLTKAQYTSMAKMRMLQPKLAAMRERIGD-DRQRMSQ 404 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYK +NPL GC PI+LQ+P+F ++Y + S+E+RHAPF+GWI DL+A DP Sbjct: 405 EMMELYKKEKVNPLGGCLPIVLQMPIFISLYWALMESVELRHAPFFGWITDLSAQDPYY- 463 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 I P++M SMF+ KMSP D Q I+ ++PV+F Sbjct: 464 ------------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFIPVMFTVFFL 505 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW SNV++++QQ +I + + Sbjct: 506 WFPAGLVLYWLVSNVVTLIQQTLIYRALEKK 536 >gi|331017731|gb|EGH97787.1| membrane protein insertase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 562 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 146/585 (24%), Positives = 241/585 (41%), Gaps = 53/585 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N N N+ +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASA 59 Query: 58 IDDRAQ------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A A++ + +K L +I+ G L L Y Sbjct: 60 DVPSATGNTASAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPD 119 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFK 161 L + + + A+ T + V++ + ++L F Sbjct: 120 VPFQLF-DNGGERTFLAQSGLTGTNGPDARASGRPVYSSAQKSYQLADGQDSMVVELKFS 178 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQ 217 +R Y + V N S + ++ R Sbjct: 179 ENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATY 238 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 G + + DI+K I W+ Y+ + +IP + Q + Sbjct: 239 LGAALWTAAEPYKKVSMKDIDKGQIKEN-VQGGWVAWLQHYFVTAWIPDHNVTNAVQTR- 296 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 D Y F++ +++ PG TT L+AG K + P E+ +D+G Sbjct: 297 -KDSQGNYIIGFTSPTLSVAPGAQGETTATLYAGPKSQAVLKELS-----PGLELTVDYG 350 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 FLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLA 410 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP Sbjct: 411 VLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAP 469 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DL+ DP I PIIM +MFIQ +++P P D QA Sbjct: 470 WILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQA 510 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 KVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 555 >gi|114322029|ref|YP_743712.1| protein translocase subunit yidC [Alkalilimnicola ehrlichii MLHE-1] gi|122310593|sp|Q0A4L5|OXAA_ALHEH RecName: Full=Inner membrane protein oxaA gi|114228423|gb|ABI58222.1| protein translocase subunit yidC [Alkalilimnicola ehrlichii MLHE-1] Length = 562 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 136/571 (23%), Positives = 245/571 (42%), Gaps = 38/571 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF-----YVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 ME F+ +ALS++ + W ++ E + E + P++ + Sbjct: 1 MENQR-IFLFLALSILGLLLWTSWERDTRAPVATEEVVEAEDDVPAPAETPDEAPDPADG 59 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + RV + + I+ +G ++L + + ++P + + Sbjct: 60 ETPARDRAEVEDERRVRVVTDLMDLEISTRGGDIRRVDLLQHGTTATDDTPFRLMADDRD 119 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN--ILFERTIS 173 L S + ++L + + N + Sbjct: 120 PLFIAQTGLIDDSDNRPDHRALFRAERDEYRLSEGEDEIQVRLTWADENRGIEVARVYTV 179 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS--LVE 231 + Y+ + V N ++ R ++ R+ T + + + + Sbjct: 180 QRDSYVIDVRHQVRNAGDEEWRGYSYFQLRRNPDPPGTTPWYIYTFTGGSIYSPDDRFEK 239 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D++ +S+S W + Y+ +IP + + + + Y S+ Sbjct: 240 ISFDDMDDTSLSRDIRD-GWAAMIQHYFLGAWIPPESQALRYYTRAQAGNE--YVLGMSS 296 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 T+ PG N LF G KE + + + +D+G+ +AKP+F L+ Sbjct: 297 GRQTVQPGGEAEFVNRLFVGPKEQDRLRELHDSMT-----LSVDYGFLTVLAKPLFWLLD 351 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 ++VGN+G+AI+L T+ +KL F+ L+ Y S A M+ +QP++ +L+E+ Q L Sbjct: 352 NIQDIVGNWGVAIILVTLLIKLAFYKLSATSYRSMAKMRRVQPRMQQLKERHGDDK-QAL 410 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM++LYK INPL GC PIL+QIPVF A+Y V+ S+E+RHAPF WI+DL++ DP Sbjct: 411 NQAMMELYKKEKINPLGGCLPILVQIPVFIALYWVLLESVELRHAPFMLWIQDLSSRDPY 470 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 + P++M +MF+Q +++P P D Q I+ +P+VF Sbjct: 471 F-------------------VLPLLMGATMFLQQRLNPAPLDPIQQRIMMALPIVFTGFF 511 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 FPAGL++YW +N +SI QQ IM+ A Sbjct: 512 MLFPAGLVLYWLVNNGLSIAQQWYIMRNLEA 542 >gi|307547061|ref|YP_003899540.1| preprotein translocase subunit YidC [Halomonas elongata DSM 2581] gi|307219085|emb|CBV44355.1| K03217 preprotein translocase YidC subunit [Halomonas elongata DSM 2581] Length = 566 Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats. Identities = 133/580 (22%), Positives = 230/580 (39%), Gaps = 51/580 (8%) Query: 15 VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR------------- 61 +IV W Y + + D + + + Sbjct: 17 YLIVVQWNQDYGQATQAPEAPAITSDSPASSQDAADTDSSDLSVPSSGTANAGNADMGSA 76 Query: 62 ----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A + V + L I+ +G L + ++ P V L N Sbjct: 77 MPGDKAASNSRDLVAVATDVLDIRIDPQGGDIVYAALPQHKYAEDTDQPFVLL--SDNAT 134 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 +Y A + + + + L + +R + Sbjct: 135 RSYVARSGLQLEGHQGRIAFTPEK-TEYRLNEGDDQLQVDLSATVNGVDVIKRFTFDRDS 193 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT----FGVQEGFIAVLGDKSLVEQK 233 Y + + N S + G+++R ++ G + ++ Sbjct: 194 YAVNVAYLLDNPSETPVTARFVGQLVRDNSSDPSSGPKMGMRSFLGAAFSTPEDRYLKVD 253 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + DI N W+ + Y+ S + P ++ F +D R A F+ Sbjct: 254 FDDIRDGKFENRDVEGGWVAMIQHYFTSAWAPPQDQKN--LFYTATDSQNRNVAAFAGPT 311 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 T+ T L+ G K + P E+ +D+GW +FIA P+F L+ + Sbjct: 312 RTLGAESKATLAATLYVGPKIQDRLEAVA-----PNLELTVDFGWLWFIANPLFWLLDHI 366 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 +++GN+G +I++ T+ VK PL+ K Y S A M+ + P++ L+E++ Q + + Sbjct: 367 QDVIGNWGWSIVILTLLVKTALLPLSAKAYKSMARMRKLGPEMQRLKEQYGD-DRQKMSQ 425 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++ Y+ INPL GC PI++Q+PVF A+Y ++ S+E+RHAPF WI DL+ DP Sbjct: 426 EMMKFYQKEKINPLGGCLPIVVQMPVFIALYWMLLESVELRHAPFMFWITDLSVKDPYF- 484 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 + PI+M SMF+Q ++P P D QA I+ +PVVF F Sbjct: 485 ------------------VLPILMGASMFVQQLLNPTPPDPTQAKIMKLLPVVFTFFFLW 526 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 FPAGL+IYW +N+ SI QQ I + A+ + +++ Sbjct: 527 FPAGLVIYWVVNNITSIAQQYFITRKVEADPNVGKGMKTK 566 >gi|213968445|ref|ZP_03396588.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato T1] gi|301384267|ref|ZP_07232685.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. tomato Max13] gi|302131966|ref|ZP_07257956.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926733|gb|EEB60285.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. tomato T1] gi|330876349|gb|EGH10498.1| membrane protein insertase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 562 Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats. Identities = 146/585 (24%), Positives = 241/585 (41%), Gaps = 53/585 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N N N+ +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASNTAPGIPDTAAGNNGSASA 59 Query: 58 IDDRAQ------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A A++ + +K L +I+ G L L Y Sbjct: 60 DVPSATGNTTSAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPD 119 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFK 161 L + + + A+ T + V++ + ++L F Sbjct: 120 VPFQLF-DNGGERTFLAQSGLTGTNGPDARASGRPVYSSAQKSYQLADGQDSMVVELKFS 178 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQ 217 +R Y + V N S + ++ R Sbjct: 179 ENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATY 238 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 G + + DI+K I W+ Y+ + +IP + Q + Sbjct: 239 LGAALWTAAEPYKKVSMKDIDKGQIKEN-VQGGWVAWLQHYFVTAWIPDHNVTNAVQTR- 296 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 D Y F++ +++ PG TT L+AG K + P E+ +D+G Sbjct: 297 -KDSQGNYIIGFTSPTLSVAPGAQGETTATLYAGPKSQAVLKELS-----PGLELTVDYG 350 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 FLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLA 410 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP Sbjct: 411 VLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAP 469 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DL+ DP I PIIM +MFIQ +++P P D QA Sbjct: 470 WILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQA 510 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 KVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 555 >gi|192360367|ref|YP_001984274.1| inner membrane protein, 60 kDa [Cellvibrio japonicus Ueda107] gi|254772765|sp|B3PIU1|OXAA_CELJU RecName: Full=Inner membrane protein oxaA gi|190686532|gb|ACE84210.1| inner membrane protein, 60 kDa [Cellvibrio japonicus Ueda107] Length = 552 Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats. Identities = 142/571 (24%), Positives = 251/571 (43%), Gaps = 41/571 (7%) Query: 1 MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N +A A+ +++ W +F + N + + + Sbjct: 1 MDWQKNLLLAAIAAVILMLFIRWNHFQEQLPQHQAGNTPAGSSIAAIAPDSNGDIPSAVP 60 Query: 59 DDRAQALSMS-----PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + + +++K +L+ +IN G ++L + +++ LL Sbjct: 61 TASDTPQATADSSKVELIQVKTDNLLVTINPLGGDIASVSLPRHFAKLNTPDEPFVLLDN 120 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFER 170 N + Y ++ + T + + K + + L + + +R Sbjct: 121 RNN-HTYVSQSGLIGTNGTDTAQGRPLFNSSSTSYELKEGSDGLVVDLTLQQGAVNITKR 179 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT---NTFGVQEGFIAVLGDK 227 YL + + N + G+I R G ++ Sbjct: 180 FSFKRGDYLIGVEYLIDNQAETPWSAQLYGQIKRDSQNFVKVSALEMNPYLGAAITTSEE 239 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + + DI K + W+ + Y+ S +IP + + + + L D Y Sbjct: 240 NYKKIHFEDIAKQTFE-TSRQGGWVAMVQHYFISAWIPDASSQVNYKLRKLGD-QDLYLL 297 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F+ + + PG +AG K+ + P ++ +D+GW ++IAKP+F Sbjct: 298 GFTTQPVVVEPGSKGVIKASFYAGPKDTERLEEIS-----PYLDLTVDYGWLWWIAKPLF 352 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 + + + +GN+G+AI+ T+ VKLLFFPL+ Y S A M+ +QPK+ EL+E++ Sbjct: 353 AFLKFIHGFLGNWGLAIIGLTLSVKLLFFPLSAASYRSMAKMRKLQPKLLELKERY-GED 411 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M++LYKT +NP GC P+L+Q+PVF A+Y V+ S+E+RHAPF+GWI+DL+ Sbjct: 412 RQKFSQEMMKLYKTEQVNPFGGCLPLLIQMPVFIALYWVLMESVELRHAPFFGWIEDLSR 471 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP + PII +M+I K++P P D QA I+N +P VF Sbjct: 472 MDPYF-------------------VLPIIYGATMWIMQKLNPQPTDPMQARIMNMLPFVF 512 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FPAGL++YW +N++SI QQ VI + Sbjct: 513 TFMFLWFPAGLVLYWVTNNLLSIAQQYVITR 543 >gi|88658314|ref|YP_507580.1| putative inner membrane protein translocase component YidC [Ehrlichia chaffeensis str. Arkansas] gi|88599771|gb|ABD45240.1| inner-membrane protein, 60 kDa [Ehrlichia chaffeensis str. Arkansas] Length = 579 Score = 351 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 213/585 (36%), Positives = 324/585 (55%), Gaps = 19/585 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ LSV+I+ W+ Y + E P DN Sbjct: 1 MVEVRNLILAVILSVLIMMGWRFIYDKFFTTQHAIEDNTSSDAMIPEIDDN--FIHKTRS 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + R++L N + GSI+LKGAQFDDL + YH+ NS + LLSP T+N Y Sbjct: 59 EVIESNTNIRIKLSNEKMNGSISLKGAQFDDLIFKNYHVTPDKNSEGIVLLSPEETENVY 118 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 F E ++ + I +P +++WN L+P PI L + N ++F+ I+LD Y+F Sbjct: 119 FIEFGWIDPQHKITVPTHSSIWNSDQST-LSPNNPITLTWDNKQGVVFKIKITLDNDYMF 177 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 KI VTNN+ I P GRI R K + + EG + G +L E Y I K Sbjct: 178 KIEQMVTNNTDSIINLIPYGRINRSKHTAEKSYWISHEGAVGSFG-NTLKEWTYKAITKE 236 Query: 241 SISNFHESNS------WLGISDKYWASVFIPSKETSFHSQFK---YLSDGHARYQAKFSA 291 + + W+GI DKYW + IP+ + F + R+Q FS Sbjct: 237 KNIKIQQQDINDNQNQWIGIGDKYWFTALIPNVSQKSNLNFHVKHAKHNSKDRFQVDFSH 296 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + P ++T+ N+LFAGAKE + Y+ +L I F+ +D+G YFI KP+F+L+ Sbjct: 297 DNYIAHPNNTVTSINYLFAGAKELKLLDTYKDNLNISLFDKAVDFGVLYFITKPVFLLLE 356 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 YF N++GNFG+AI+L T+ +KL+ FPL+ K YVS ++++QP I ++E +K ++ Sbjct: 357 YFNNVIGNFGLAILLLTIVIKLIMFPLSHKSYVSMLKLRHLQPDIVRIKELYKNDNDKM- 415 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 K + ++K +N+NP++G P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL++ D Sbjct: 416 SKEISAIFKKNNVNPMSGFVPVLIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLSSFDTA 475 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFV 528 NI T+FG+L F P + +GI P+I+ ++M IQ K++ DK QA + ++P +F+ Sbjct: 476 NILTIFGLLKFNPP--ICIGILPVILGITMIIQQKLNNHSSLNQDKTQANFMKFLPYIFI 533 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F SSFPAGLIIYW SN I+IVQQ +I + ++ Sbjct: 534 FIFSSFPAGLIIYWICSNSITIVQQLIIKHYVTKKFNFYKTVQQE 578 >gi|77920733|ref|YP_358548.1| inner-membrane protein [Pelobacter carbinolicus DSM 2380] gi|77546816|gb|ABA90378.1| protein translocase subunit yidC [Pelobacter carbinolicus DSM 2380] Length = 542 Score = 350 bits (898), Expect = 3e-94, Method: Composition-based stats. Identities = 147/571 (25%), Positives = 256/571 (44%), Gaps = 38/571 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 N N +A+ L V+I + F+V P +N+E ++ V D Sbjct: 1 MENKNVIIALLLMVLIWTGYTTFFVKPAPAPVNDEPAVAESFPAVTPEVVGERVVPSVDH 60 Query: 62 AQALSMSPRV-----ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 A + S + + G + L L+ Y + +S +VTL+ N Sbjct: 61 VMAAAASSDIAPRDFVVDTEDFRAVFTNVGGRLKKLELKNYRETLKEDSGLVTLVDADNA 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 + + L A + V ++ +N ++ E+ SL+ Sbjct: 121 LSTF-GILGQGDIALAENTVYATDVPAEGLTLGSDDKKDLRFTAVLSNGVVVEKVFSLNG 179 Query: 177 H-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y F + V N I+ S +++ + + G D+ + Sbjct: 180 KGYDFNLQVRVVNPGDRPIQGSLELLMVQPWSEDREGSRYSFVGPAIYADDELNTYK--V 237 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 + S W DKY+ + +P + + + + S+ ++ Sbjct: 238 KELEDGAIRHDNSGIWTAFEDKYFMTAAVPLRSEQHAFVLEKVGNAVKNI---VSSGNLS 294 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY- 354 + +S+T L+AG ++ + + ID+G+F +A+P+ ++ + + Sbjct: 295 VGGQQSVTLDYLLYAGPRDLDVLEQVNH-----GLDKAIDFGFFDMLARPLLSVLKFCHK 349 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 NL+ N+G+AI+L TVF+K+LF+PL K Y S +M+ +QP++ LREK+K+ + + + Sbjct: 350 NLISNYGVAIILLTVFIKVLFWPLTHKSYKSMRDMQKLQPEMQRLREKYKKDK-ERMNRE 408 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +++LY+ + +NP+ GC P+ QIPVFFA+YKV+ S+ +RH PF WI+DLAA DP Sbjct: 409 IMELYRKNRVNPMGGCLPMFAQIPVFFALYKVLLGSIALRHEPFIFWIQDLAAKDPYY-- 466 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 I P+IM ++MF Q KMSP D QA I+ +MPV+F F +F Sbjct: 467 -----------------ITPLIMGVTMFFQQKMSPTTMDSQQAKIMLFMPVIFTFMFLNF 509 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+GL+IYW +NV++I QQ I + G + Sbjct: 510 PSGLVIYWLVNNVLTIAQQWFINREGGQPVK 540 >gi|261346746|ref|ZP_05974390.1| membrane protein insertase, YidC/Oxa1 family [Providencia rustigianii DSM 4541] gi|282565146|gb|EFB70681.1| membrane protein insertase, YidC/Oxa1 family [Providencia rustigianii DSM 4541] Length = 550 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 147/574 (25%), Positives = 271/574 (47%), Gaps = 56/574 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + +++ E K +QT +Q + NS + + Sbjct: 1 MDSQRNLLL-IALLFVTFLVWQAW----ESDKVAQETKTVQTSQQKTDMPNSDGQAVTNS 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L IN +G D+ +L Y ++S P L + Y Sbjct: 56 -----EQGKLIAVKTDVLDVRINTRGGDIDEADLLAYPATLNSPDPFRLL--ETTPGFVY 108 Query: 121 FAELDYVST-------ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + NN + P + + + F + N +++++T Sbjct: 109 QAQSGLIGPHGPDNPANNNGQRPLYTADSASFELQAGQDELRVPMSFTDNNGVVYQKTYI 168 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVL--G 225 L Y ++ ++ N + + + G++ + + T +N F + A Sbjct: 169 LKRGKYTVEVEYSIQNPTAQPLSLAFFGQLKQTIALPEQRDTGSNNFALHTYRGAAYSSD 228 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + + +SDIE ++S W+ + +Y+A+ ++P S F + Sbjct: 229 ENNYKKYSFSDIEDKNLSLT-TKGGWVAMLQQYFATAWVPEATEQ--STFYTIDLDKKSA 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI + T ++ L+ G + + P ++ +D+GW +FI++P Sbjct: 286 IVGYKSEPVTIAANGAGTYSSTLWIGPEIQSEMAEVA-----PHLDLTVDYGWLWFISQP 340 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + + VGN+GIAI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 341 LFKLLKFIHGFVGNWGIAIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGD 400 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ +YK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF+GWI+DL Sbjct: 401 DK-QRMSQEMMAMYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFFGWIQDL 459 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I P++M ++MF+ KMSP D Q I+ +MP Sbjct: 460 SAQDPYY-------------------ILPVLMGVTMFVIQKMSPTAVTDPMQQKIMTYMP 500 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 VVF FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 VVFTVFFLWFPSGLVLYYIVSNLVTIIQQQIIYR 534 >gi|212632922|ref|YP_002309447.1| inner membrane protein, 60 kDa [Shewanella piezotolerans WP3] gi|254778162|sp|B8CH68|OXAA_SHEPW RecName: Full=Inner membrane protein oxaA gi|212554406|gb|ACJ26860.1| Inner membrane protein, 60 kDa, putative [Shewanella piezotolerans WP3] Length = 542 Score = 350 bits (897), Expect = 4e-94, Method: Composition-based stats. Identities = 133/563 (23%), Positives = 239/563 (42%), Gaps = 36/563 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + + ++ + + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPQPVAQTQSSVAPSTVADAHSSDVPDADSAL 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + + I+ G L + L+ + P V L ++ Y Sbjct: 60 PETVTASKELITVTTDQFVLKIDPVGGDIVHSALLSHKLEQDGDDPFVLLEQTNDIY--Y 117 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPIKLVFKNANNILFERTISL-DE 176 A+ + ++ S + T + L + AN + + + + Sbjct: 118 IAQSGLIGRDGIDSSTTGRAHFDSASREYDLAGQDTLEVPLTYLAANGVTYTKLFTFYRG 177 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + + N S Q++ G+I ++ ++ A + E+ D Sbjct: 178 KHNVDVDYQINNTSDAQLQVQMYGQIKHSIKKSESSMMMPTYRGAAFSTADTRYEKYSFD 237 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 N W+ + Y+ S ++P + + G A F I Sbjct: 238 DMADKNLNKSTLGGWVAMLQHYFVSAWVPPENDKNIIFSSVSAGGLAN--IGFRGALYDI 295 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG + + G K+ + + +++D+G+ +++A P+ L+ ++ + Sbjct: 296 APGTEQSIKAQFYVGPKDQEALSALSES-----LNLVVDYGFLWWLAIPIHWLLMFYQSF 350 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+G+AI+L T+ V+ + +PL K QY S A M+N+QPK+ +++E+F Q + +AM+ Sbjct: 351 VGNWGVAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLADMKERFGD-DRQKMGQAMM 409 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 410 ELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESYELRHAPFMLWITDLSVQDPYY---- 465 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSF 534 + PI+M +SMFI KM P P D Q ++ WMPV+F F Sbjct: 466 ---------------VMPILMGVSMFIMQKMQPMAPTMDPMQVKMMQWMPVIFTVFFLWF 510 Query: 535 PAGLIIYWSWSNVISIVQQAVIM 557 PAGL++YW N+++I QQ +I Sbjct: 511 PAGLVLYWLVGNLVAITQQKIIY 533 >gi|297539958|ref|YP_003675727.1| membrane protein insertase [Methylotenera sp. 301] gi|297259305|gb|ADI31150.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Methylotenera sp. 301] Length = 542 Score = 350 bits (897), Expect = 4e-94, Method: Composition-based stats. Identities = 148/559 (26%), Positives = 247/559 (44%), Gaps = 32/559 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + S+ I+ W + E+ + + QTV + + + D Sbjct: 1 MDTKRLVLFVIFSMSILMLWDAWQRQHAPAEVVQQ--SSQTVAGATSSTAAVSGNVAVDS 58 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 LS R+ + I G L L + + + V LL S Y Sbjct: 59 DFKLSAGQRISVTTDLYKADIETTGGDLRRLELLKHRASDNVKTNFV-LLDDSAKPMTYV 117 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 A+ + + + T ++L + + + Y Sbjct: 118 AQTGLIGADLPSHKAVFTSAAPTYQMQDGKDTLEVRLSWVGNGVTVDKVYTFHRNKYAID 177 Query: 182 IVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + + N S I +I+ ++ + G + + D+ K Sbjct: 178 VNYEIKNGSAAAITPVVYYQIVHDNESNQGSKLMPTFTGGTYYTEATKFKKLAFKDMAKE 237 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 + ++ W+G+ Y+ S +IP +F Y+ + TI PG Sbjct: 238 PLKVT-SNDGWVGLLQHYFVSAWIPKDG--LAREFYTEKLNEHMYRIGSKSTLSTIAPGA 294 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 S+T LF+G + + P E +D+GW +A P+F ++S ++LV N+ Sbjct: 295 SLTVPARLFSGPQTKKDLVETA-----PGLEYTVDYGWLKMVASPLFWVLSLIHSLVHNW 349 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI+L T+ +K F+PL+ K Y S A M+ + P+++ +++KF Q +Q+AM++LYK Sbjct: 350 GVAIILLTLLIKAAFYPLSAKSYRSMAQMRELAPRLESMKQKFGD-DRQKMQQAMMELYK 408 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 T INP++GC PIL+QIPVF ++Y ++ S+E+RHAPF+GWI+DL+A DP Sbjct: 409 TEKINPMSGCLPILIQIPVFISLYWMLLGSIELRHAPFFGWIQDLSAVDPYY-------- 460 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 I PIIM +SM IQ K++P P D QA ++ WMPV+F FPAGL++ Sbjct: 461 -----------ILPIIMGISMIIQTKLNPKPTDPIQAKVMTWMPVIFSVFFFFFPAGLVL 509 Query: 541 YWSWSNVISIVQQAVIMKM 559 YW +N+ISI QQ + K Sbjct: 510 YWVVNNIISIWQQWYVNKS 528 >gi|271502719|ref|YP_003335745.1| membrane protein insertase, YidC/Oxa1 family domain containing [Dickeya dadantii Ech586] gi|270346274|gb|ACZ79039.1| membrane protein insertase, YidC/Oxa1 family domain containing [Dickeya dadantii Ech586] Length = 543 Score = 350 bits (897), Expect = 4e-94, Method: Composition-based stats. Identities = 150/570 (26%), Positives = 252/570 (44%), Gaps = 52/570 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + E N QT +Q N A + Sbjct: 1 MDSQRNLLV-IALLFVTFMIWQQW------ETDKNPPATTQTTQQANGAVGDAANQGVP- 52 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G ++ +L Y ++ SN P L S Y Sbjct: 53 ---ASGQGKLITVKTDVLSLNINTRGGDIEEADLLAYPAELGSNQPFKLL--ESTPAFTY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N S I L + +AN + F +T L Sbjct: 108 QAQSGLTGKNGPDNPANGARPLYTASADRFELAAGQNELRIPLTYTDANGVSFTKTFVLK 167 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 Y + +V N S + + G++ + T +N F + A Sbjct: 168 RGEYALNVEYSVNNTSAQPLELTLFGQLKQSIDLPSHRDTGSNNFALHTYRGAAFSSSDD 227 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS + N + W+ + +Y+A+ ++P + + F + G+ F Sbjct: 228 KYRKYSFSDMKENLNINTQGGWVAMLQQYFATAWVP--NAAASNTFYSANLGNGLAAIGF 285 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + + + PG L+ G + + P ++ +D+GW +FI++P+F L Sbjct: 286 KSPSVVVQPGSQQNLNATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKL 340 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 341 LKFLHGFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK-Q 399 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYKT +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 400 RMSQEMMALYKTEKVNPLGGCFPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P + PI+M L+MF KMSP D Q I+ +MPV+F Sbjct: 460 PYY-------------------VLPILMGLTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 500 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I QQ +I + Sbjct: 501 VFFLWFPSGLVLYYIVSNLVTIAQQQLIYR 530 >gi|311696590|gb|ADP99463.1| inner membrane protein translocase component YidC [marine bacterium HP15] Length = 571 Score = 350 bits (896), Expect = 5e-94, Method: Composition-based stats. Identities = 144/597 (24%), Positives = 250/597 (41%), Gaps = 64/597 (10%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ------------- 45 M+ A +S ++V AW Y P E + QT Sbjct: 1 MDIQRIVLFAGLAIVSYLMVLAWNEDYHQPPETAQVAESQPSQTAGNMGNSDNMVLPEDS 60 Query: 46 --------PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + AV+ + ++ I+ L Y Sbjct: 61 SAQVDGDGEFTTPETGQAVISSTETTTAVSDQFITVRTDVYDLQIDRVSGNLVKARLLDY 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TP 152 ++S P+ L + N Y E + N + Sbjct: 121 DDTLNSEKPLTLLNNTQN--RLYVLESGLIGRDGPDSRKNGSAPVYSADAASYELAEGDN 178 Query: 153 TTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 + L + + N + + + + Y + V N S ++ + + G+I+R + T Sbjct: 179 QLQVDLTYTSDNGVQITKRYEFERNSYEISVKYLVENQSSEEWQANFTGKIVRDQSPDPT 238 Query: 212 NTFGV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 + + G + + + + D++++ I+ +N WL Y+ S ++P + Sbjct: 239 SQTSMGIQAFLGLVISSPEDPYEKFDFGDLQENQINQ-SVTNGWLAFLQHYFLSAWVPER 297 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + Q Y F ++ PG++ + G K + Sbjct: 298 DIPAQYQTTRRGPN---YVMGFVYPATSVAPGETAEIGARAYVGPKIIERLEGMA----- 349 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P + +D+GW +FI+ P+F+++ +F++LVGN+G++I+L TV VK +FF L+ Y S A Sbjct: 350 PNLDRTVDFGWLFFISLPLFIILDWFHSLVGNWGVSIILLTVLVKAVFFHLSATSYKSMA 409 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ + P++ L+E + Q + + M+ LYK INPL GC PIL+Q+PVF ++Y V+ Sbjct: 410 KMRAVAPQLTRLKELYGD-DRQRMSQEMMALYKREKINPLGGCLPILVQMPVFISLYWVL 468 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+++RHAPF WI+DL+ DP I PI+M SMF+QM + Sbjct: 469 FESVQLRHAPFMLWIQDLSVMDPYF-------------------ILPILMGASMFLQMSL 509 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +P P D QA I+ MP++F FPAGL++YW +N++SI QQ I + AE+ Sbjct: 510 NPTPPDPMQAKIMKMMPLIFTVFFLWFPAGLVLYWLVNNILSIAQQWYITRKIEAEM 566 >gi|170718320|ref|YP_001785332.1| inner membrane protein translocase component YidC [Haemophilus somnus 2336] gi|254772997|sp|B0URU3|OXAA_HAES2 RecName: Full=Inner membrane protein oxaA gi|168826449|gb|ACA31820.1| 60 kDa inner membrane insertion protein [Haemophilus somnus 2336] Length = 541 Score = 350 bits (896), Expect = 5e-94, Method: Composition-based stats. Identities = 147/570 (25%), Positives = 254/570 (44%), Gaps = 45/570 (7%) Query: 2 ERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 + + +AL S +I WQ Y P+ E + + + Sbjct: 1 MDSKRSLLFMALLFISFLIYQQWQVDYNTPKPEVTEQAQVSEVNSTALTATSDIA----- 55 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + L+N +N G L Y ++ S++P V L +N Sbjct: 56 ---NDTQAKGRVITLENDVFRLKVNTLGGDVIGSELLNYDAELHSSAPFVLL--QNNADK 110 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISL 174 Y A+ V N I+ + + + L+F+ I + + Sbjct: 111 VYIAQSGLVG-KNGIDSRAGRANYQVEGDVFKLAEGQQELKVPLIFEKDGVIYRKVFVLK 169 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 Y ++ +TN S I P ++ +++ + A ++ ++ Sbjct: 170 PGSYALEVNFEITNQSPKPIELVPYAQLTHTLVESSGSMAMPTYTGGAYSSSETNYKKYS 229 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 + + + + H W+ + Y+ S +IP+++ + + H + + I Sbjct: 230 FEDMEKADLDIHTKAGWVALLQHYFVSAWIPNQDANNTLYTLTNTKKH-LGSIGYRSAPI 288 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I G + T L+ G K + ++ +D+GW +FIAKP+F L++ Sbjct: 289 VIENGATETIHTQLWTGPKLQDQMADVAN-----HLDLTVDYGWAWFIAKPLFKLLTLIQ 343 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +LV N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + Sbjct: 344 SLVQNWGLAIIGVTLVVKAVLYPLTKAQYTSMAKMRMLQPKLQEMRERF-GEDRQRMSQE 402 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GW++DL+A DP Sbjct: 403 MMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFMEAVELRHAPFFGWVQDLSAQDPYF-- 460 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I PI+M SMF+ KMSP P AD Q ++ +MP++F+ Sbjct: 461 -----------------ILPILMGASMFLLQKMSPTPVADPMQQKVMTFMPLIFMVFFLF 503 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW SN+I+I QQ +I + + Sbjct: 504 FPAGLVLYWLASNLITIAQQWLIYRGLEKK 533 >gi|304313414|ref|YP_003813012.1| Preprotein translocase subunit [gamma proteobacterium HdN1] gi|301799147|emb|CBL47390.1| Preprotein translocase subunit [gamma proteobacterium HdN1] Length = 568 Score = 350 bits (896), Expect = 5e-94, Method: Composition-based stats. Identities = 137/590 (23%), Positives = 244/590 (41%), Gaps = 54/590 (9%) Query: 1 MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA---- 54 M+ + + +S ++Y W Y + + + + S Sbjct: 1 MDWQRTLLIGLLAIVSYAMIYTWNQDYGSKQHAASETKLPQSYSQGDTPVITESPKGSED 60 Query: 55 ------------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 L+ D A + ++ L I+ G + L+ Y + + Sbjct: 61 LPSVTNSEKQSLPALVSDAQSAKKAGGLIRVETDVLSVEISTLGGDVVSVRLKAYPISIE 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVF 160 +++L+ + Y A+ + + + L F Sbjct: 121 DKGTPISILA-ETAQTTYVAQSGLAGINGPDSNAAGRPQYTTDQTEYELKGDHLVVPLHF 179 Query: 161 KNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--- 216 + N + +T Y+ K V N S + +I R Sbjct: 180 VDENGVKVTKTFEFAKGSYVIKNRYDVHNTSSQPWTAAFFAQIKRDNSPDPGVQHTTGFG 239 Query: 217 ---QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 G +K ++K+ + K+ + + W+ I Y+ + +IP + + Sbjct: 240 LPTFLGVAYWSPEKPYNKEKFDALVKTPLDLKGVTGGWMAIIQHYFLAAWIPDQNQQYDY 299 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + A+ + +T+ PG S L+ G K T+ +++ Sbjct: 300 STAAVKGNT---IARIVGHSVTVAPGASQDYQASLYVGPKIQKTLEALVPGKG---LDLV 353 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G +FI+K +F L+S F+ L N+G++I+L TV +K LFF + Y S A M+ +Q Sbjct: 354 VDYGPLFFISKILFWLLSTFHALTANWGVSIILLTVTIKALFFYPSAISYRSMAKMRTVQ 413 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P + LRE++ Q L + M++LY+ + INPL GC PIL+Q+PVF A+Y + S+E+ Sbjct: 414 PALLRLREQYAD-DRQKLSQEMMKLYRDNKINPLGGCLPILIQMPVFLALYWALLESVEL 472 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R APF+GW+ DL+ DP I P+IM +M+IQ ++P P D Sbjct: 473 RQAPFFGWLTDLSVMDPYF-------------------ILPLIMGGTMYIQTALNPAPPD 513 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 QA ++ +MP++F FPAGL++YW +N +SI+QQ +I + AE Sbjct: 514 PMQAKLMKFMPIIFTVMFLWFPAGLVVYWITNNSLSILQQWIITRKIEAE 563 >gi|326797441|ref|YP_004315261.1| membrane protein oxaA [Marinomonas mediterranea MMB-1] gi|326548205|gb|ADZ93425.1| Membrane protein oxaA [Marinomonas mediterranea MMB-1] Length = 553 Score = 350 bits (896), Expect = 5e-94, Method: Composition-based stats. Identities = 146/583 (25%), Positives = 249/583 (42%), Gaps = 53/583 (9%) Query: 1 MERNWNYFVAIALS---VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN------ 51 M+ YF+ AL ++ W Y + N + Sbjct: 1 MDF-RRYFLWGALFVSGYLLFLQWNQDYGPQSQTSQPVAQNQTTVNTATNAESDLPNSVS 59 Query: 52 ----SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + + A+AL+ +++K +L SI+ G +L Y + ++ P Sbjct: 60 NTTLPASDTDVPANAKALASGQLIDVKTDTLDISIDPVGGDLVGASLLQYKKTLDASDPF 119 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP---TTPIKLVFKNAN 164 V L +NT Y ++ + T + +L T + L F + Sbjct: 120 VIL--ENNTTRTYVSQSGLIGQDGIDNSKGRPTYHADKTQYVLADGENTLDVNLYFTDEK 177 Query: 165 NILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEG 219 + + +T Y + TV N S D R +I R + + G Sbjct: 178 GVEYTKTYRFTRGVYSVEQSITVNNTSADDWRGKQFAQIKRDSTEDPSTATSLGLQPYLG 237 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + + +SD+ + + ++ W+ + Y+ S +IP + + Q + + Sbjct: 238 GAISTDEVRYEKVSFSDM-EEKPAKITTNSGWIALLQHYFVSAWIPKQGETVTLQTRSNN 296 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 F+ E+ + G+ T + + G K + + + +D+G Sbjct: 297 G---INFIGFTGPEVEVPAGQKGTLSATFYVGPKLQDQLAATAAN-----LDKTVDYGML 348 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +++A+P+F L++ ++V N+G+AI+L V VK +FF L+ Y S A M+ P++ L Sbjct: 349 WWLAEPLFWLLTAIQSVVINWGVAIILIVVCVKAVFFKLSAASYRSMAKMRKFGPELTRL 408 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE++ Q + +AM+ LYK INPL GC PIL+Q+PVF ++Y V+ S+E+RHAPF Sbjct: 409 REQYGD-DRQKMSQAMMTLYKKEKINPLGGCLPILVQMPVFLSLYWVLMESVELRHAPFM 467 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+ DP + PI+M LSM Q ++P P D QA I Sbjct: 468 LWINDLSYMDPYY-------------------VLPILMGLSMLGQQMLNPTPPDPMQARI 508 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + MP+ F F FP+GL++YW +N +SI+QQ VI K A Sbjct: 509 MKIMPIAFTFFFLWFPSGLVLYWVVNNTLSIIQQYVITKRIEA 551 >gi|226942148|ref|YP_002797222.1| inner membrane protein translocase component YidC [Laribacter hongkongensis HLHK9] gi|254772999|sp|C1D6H8|OXAA_LARHH RecName: Full=Inner membrane protein oxaA gi|226717075|gb|ACO76213.1| YidC [Laribacter hongkongensis HLHK9] Length = 550 Score = 350 bits (896), Expect = 6e-94, Method: Composition-based stats. Identities = 134/570 (23%), Positives = 234/570 (41%), Gaps = 45/570 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 V I LS +++ WQ ++ + P + + Sbjct: 1 MDTKRLIVFIVLSFGLLFVWQEYFAPKPQPKPVAAAVQPDGTPAPATARPADSPATGK-- 58 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 L+ + + + + IN G L L + + P +L Y Sbjct: 59 ---LTSAQTITVTTDLVKAQINTAGGDIRSLELLTQGAIDNPDKPF--MLMTEQGGRTYV 113 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFERTISLD-EHY 178 A+ +S+ ++ + + + +L + L N + ++ + + Y Sbjct: 114 AQSGLLSSDASLPTHKTLYAADKTAYTLLPDQNTLTVTLAAAPVNGVEVKKIFTFKRDSY 173 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + + N+S + + R++R P+ ++ G + + D Sbjct: 174 VIDVRYDIINHSDKPVDATAYYRLLRDGKAPEGESSMAHTFTGPAVYTETGKFQKVSFED 233 Query: 237 IEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHS-------QFKYLSDGHARYQAK 288 + K + N W+ + Y+ S +I QF+ Y A Sbjct: 234 LAKGKGDYVRQADNGWVAMVQHYFVSAWILKTNDGKSVCSSAEACQFELKPAAGDLYSAG 293 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + G+ + L+AG ++ + P + D+GW IA P+F Sbjct: 294 VLVKLPVVAAGQQYSIDMPLYAGPEDTRRMATVA-----PGLVLTKDYGWVTIIATPLFW 348 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ Y LV N+G AI+L TV VK F+PL+ Y S A MK + P++ L+E++ Sbjct: 349 LLDKLYGLVHNWGWAIVLLTVLVKAAFYPLSAASYRSMAKMKALAPRMQRLKEQYGD-DR 407 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q Q+A +++YKT +NPL GC PI++QIPVF +Y + S+E+R AP+ WI DLA Sbjct: 408 QKFQQATMEMYKTEKVNPLGGCLPIVVQIPVFIGLYWALLASVELRQAPWILWIHDLAKP 467 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P +M+ +M++Q ++PPPAD QA ++ MP+ F Sbjct: 468 DPYY-------------------ILPALMAATMYLQTFLNPPPADPLQAKMMKIMPLAFS 508 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N++SI QQ + K Sbjct: 509 VMFFFFPAGLVLYWLVNNILSIAQQWWVNK 538 >gi|15603030|ref|NP_246102.1| putative inner membrane protein translocase component YidC [Pasteurella multocida subsp. multocida str. Pm70] gi|38503177|sp|Q9CLQ2|OXAA_PASMU RecName: Full=Inner membrane protein oxaA gi|12721513|gb|AAK03249.1| YidC [Pasteurella multocida subsp. multocida str. Pm70] Length = 541 Score = 349 bits (895), Expect = 7e-94, Method: Composition-based stats. Identities = 147/571 (25%), Positives = 255/571 (44%), Gaps = 45/571 (7%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + + +S ++ WQ Y P+ + + + A Sbjct: 1 MDSRRSLLVIALLFISFLVYQQWQLDYHTPKPVATEQVKVSSDVPASSASSSSDIATT-- 58 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + + L+N ++ G L Y +++SN+P L + +N + Sbjct: 59 -----AQAQGRIITLENDVFRLEVDTLGGDVVHSELLKYDAELNSNTPFTLLTNKAN--H 111 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL---VFKNANNILFERTISLD 175 Y A+ V I+ + + +L + + F + L Sbjct: 112 VYIAQSGLVGKDG-IDTKAGRANYQVDGDTFKLADGQNELAVPFVFEKDGVTFRKIFVLK 170 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-FGVQEGFIAVLGDKSLVEQK 233 Y + + N S I P G++ + N G + + + Sbjct: 171 RGAYDIAVNFEIDNQSDKTIEVEPYGQLRHTLVEDTGNVAMPTYTGGAYSSSETNYKKYS 230 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 ++D+EK+++S W+ + Y+ S +IP+++ + + + Sbjct: 231 FADMEKANLS-ISTKAGWVAVLQHYFVSAWIPNQDADNQL-YSLTDKANNLASIGYRGPV 288 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 I G T + L+ G K + ++ +D+GW +FIAKP+F L+++ Sbjct: 289 TAIPAGAKETIRSSLWTGPKLQDQMATVAN-----HLDLSVDYGWAWFIAKPLFWLLTFI 343 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + Sbjct: 344 QSIVQNWGLAIIGVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERF-GEDRQRMSQ 402 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 403 EMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY- 461 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALS 532 I PI+M SMF+ KMSP P AD Q I+N+MP++F+ Sbjct: 462 ------------------ILPILMGASMFLLQKMSPTPVADPTQQKIMNFMPLIFMVFFL 503 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+I+I QQ +I + + Sbjct: 504 WFPSGLVLYWLVSNLITIAQQQLIYRGLEKK 534 >gi|74318843|ref|YP_316583.1| protein translocase subunit yidC [Thiobacillus denitrificans ATCC 25259] gi|123611090|sp|Q3SF38|OXAA_THIDA RecName: Full=Inner membrane protein oxaA gi|74058338|gb|AAZ98778.1| preprotein translocase subunit YidC [Thiobacillus denitrificans ATCC 25259] Length = 546 Score = 349 bits (894), Expect = 8e-94, Method: Composition-based stats. Identities = 145/563 (25%), Positives = 236/563 (41%), Gaps = 35/563 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ + I S ++ W+ + + A Sbjct: 1 MDNQR-LILFIVFSFSLLLLWEAWQDKQAPAPATRPVAGAPAGSAAPTPSTALNAPAAAP 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + R ++ L +I+ G +L L GY N V L + Y Sbjct: 60 AQTGFAKGARAVVETDVLRATIDANGGDLRELQLLGYRETEDKN--RVFTLFEDSRTRPY 117 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA--NNILFERTISLDEHY 178 A+ +V + LV+ +A + + I + Sbjct: 118 LAQSGFVGGGLPTHRSTFELTPGTYRLTGGAARLEVPLVWNDAARGVRVEKTFIFTRGSH 177 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + V N + + +P + RH P+ + G K + ++D Sbjct: 178 EVAVRTRVVNRGKEPLDLTPYYQFTRHGEAPRGESFFLYTYTGPAFYTDAKKFQKVPFTD 237 Query: 237 IEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 I+ S +N W+G+ ++ + ++P + + L +G Y A E Sbjct: 238 IQDGSAEFEKTATNGWVGLVQHHFVAAWLPEESVKREYYARSLGEG--LYSAGVILAEGQ 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG+ T T L+AG + + + A P ++ D+GW +A P+F + Sbjct: 296 LAPGQQKTFTVPLYAGPQSQAVL-----EKAAPGLDLARDYGWLTPLAYPIFWSLEKIER 350 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 LVGN+G AI++ T+ +KL +PL+ Y S A MK + P++ +L+E + + L +AM Sbjct: 351 LVGNWGWAIIILTILIKLALYPLSAAGYKSMAKMKKLTPRLQQLKETYGDDRAK-LHQAM 409 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++YKT INPL GC PIL+QIPVF A+Y V+ ++EMR AP+ GWI DL A DP Sbjct: 410 AEMYKTEKINPLGGCLPILIQIPVFIALYWVLLAAVEMRGAPWLGWITDLTAPDPWY--- 466 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 I PIIM ++ +Q+K++P P D QA I+ MPV F FP Sbjct: 467 ----------------ILPIIMGVTSILQVKLNPQPMDPMQAKIMMIMPVAFTVMFVFFP 510 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL++YW +N++SI QQ I K Sbjct: 511 AGLVLYWVVNNILSIAQQWAINK 533 >gi|268593484|ref|ZP_06127705.1| membrane protein insertase, YidC/Oxa1 family [Providencia rettgeri DSM 1131] gi|291310905|gb|EFE51358.1| membrane protein insertase, YidC/Oxa1 family [Providencia rettgeri DSM 1131] Length = 549 Score = 349 bits (894), Expect = 9e-94, Method: Composition-based stats. Identities = 143/572 (25%), Positives = 260/572 (45%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + +++ + K +QT +Q + + AV Sbjct: 1 MDSQRNLLL-IALLFVSFLVWQAW----ESDKVAQDVKTVQTSQQADMPSSDAQAVTG-- 53 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL-SPSNTKNA 119 + +K L IN +G D+ +L Y + S SP L +P A Sbjct: 54 ----SGQGKLITVKTDVLDIRINTRGGDIDEADLLAYPATLHSESPFRLLETNPGFVYQA 109 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISL 174 + N +++ S L + + I Sbjct: 110 QSGLIGLHGPDNPANNNGERPLYSADSTTFTLEKGQDVLRVPMTFTDNNGVVYQKTYIVK 169 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVL--GDK 227 Y ++ ++ N + + + G++ + + T ++ F + A + Sbjct: 170 RGQYTVEVEYSIQNPTAQPLSLAFFGQLKQTIELPKERDTGSSNFALHTYRGAAYSSDEN 229 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + + DIE ++ W+ + +Y+A+ +IP+ S F + Sbjct: 230 NYKKYSFGDIEDKNLDLT-TKGGWVAMLQQYFATAWIPASAE--KSTFYTIDLDKKSAII 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + +TI + T ++ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSEPMTIAANGAGTYSSTLWVGPEIQSEMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + + VGN+GIAI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 342 KLLKFIHGFVGNWGIAIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ +YK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF+GWI+DL+A Sbjct: 402 -QRMSQEMMAMYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFFGWIQDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I P++M ++MF+ KMSP D Q I+ +MPVV Sbjct: 461 QDPYY-------------------ILPVLMGVTMFVIQKMSPTAVTDPMQQKIMTYMPVV 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ VI + Sbjct: 502 FTIFFLWFPSGLVLYYIVSNLVTIIQQQVIYR 533 >gi|237801668|ref|ZP_04590129.1| membrane protein insertase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024527|gb|EGI04583.1| membrane protein insertase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 562 Score = 349 bits (894), Expect = 9e-94, Method: Composition-based stats. Identities = 143/585 (24%), Positives = 237/585 (40%), Gaps = 53/585 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N + +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTPAPGIPDTAAGTNGSASA 59 Query: 58 IDDR------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A++ + +K L +I+ G L L Y Sbjct: 60 DVPSATANTTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRPD 119 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFK 161 L + + + A+ T V++ + ++L F Sbjct: 120 VPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYSSAQKTYQLADGQDSMVVELKFS 178 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQ 217 +R Y + V N S + ++ R Sbjct: 179 ENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTATY 238 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 G + + DI+K I W+ Y+ + +IP + Q + Sbjct: 239 LGAALWTAAEPYKKVSMKDIDKGQIKET-VQGGWVAWLQHYFVTAWIPDHNATNSVQTR- 296 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 D Y F++ +T+ PG T+ L+AG K + P E+ +D+G Sbjct: 297 -KDSQGNYIIGFTSPTLTVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDYG 350 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 FLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKLA 410 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR AP Sbjct: 411 VLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAP 469 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DL+ DP I PIIM +MFIQ +++P P D QA Sbjct: 470 WILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQA 510 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 KVMKLMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 555 >gi|289677544|ref|ZP_06498434.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. syringae FF5] gi|302185836|ref|ZP_07262509.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. syringae 642] gi|330898611|gb|EGH30030.1| membrane protein insertase [Pseudomonas syringae pv. japonica str. M301072PT] gi|330937304|gb|EGH41312.1| membrane protein insertase [Pseudomonas syringae pv. pisi str. 1704B] gi|330976398|gb|EGH76455.1| membrane protein insertase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 563 Score = 349 bits (894), Expect = 9e-94, Method: Composition-based stats. Identities = 141/586 (24%), Positives = 233/586 (39%), Gaps = 54/586 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N + +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59 Query: 58 IDDR-------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A++ + +K L +I+ G L L Y Sbjct: 60 DVPSANATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160 L + + + A+ T V+ L F Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216 +R Y + V N S + ++ R Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWSGNLFAQLKRDASSDPSSTTATGTAT 238 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G + + DI+K + W+ Y+ + +IP + Q + Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQVKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 D Y F++ +++ PG T+ L+AG K + P E+ +D+ Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR A Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ WI DL+ DP I PIIM +MFIQ +++P P D Q Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 A ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|113460279|ref|YP_718337.1| putative inner membrane protein translocase component YidC [Haemophilus somnus 129PT] gi|123131891|sp|Q0I0Z1|OXAA_HAES1 RecName: Full=Inner membrane protein oxaA gi|112822322|gb|ABI24411.1| protein translocase subunit yidC [Haemophilus somnus 129PT] Length = 541 Score = 349 bits (894), Expect = 9e-94, Method: Composition-based stats. Identities = 147/570 (25%), Positives = 253/570 (44%), Gaps = 45/570 (7%) Query: 2 ERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 + + +AL S +I WQ Y P+ E + + + Sbjct: 1 MDSKRSLLFMALLFISFLIYQQWQVDYNTPKPEMTEQAQVSEVNSTALTATSDIA----- 55 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + L+N +N G L Y ++ S++P V L +N Sbjct: 56 ---NDTQAKGRVITLENDVFRLKVNTLGGDVIGSELLNYDAELHSSAPFVLL--QNNADK 110 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISL 174 Y A+ V N I+ + + +L F+ I + + Sbjct: 111 VYIAQSGLVG-KNGIDSRAGRANYQVEGDVFKLAEGQQELKVPLVFEKDGVIYRKVFVLK 169 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 Y ++ +TN S I P ++ +++ + A ++ ++ Sbjct: 170 PGSYALEVNFEITNQSPKPIEVVPYAQLTHTLVESSGSMAMPTYTGGAYSSSETNYKKYS 229 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 + + + + H W+ + Y+ S +IP+++ + + H + + I Sbjct: 230 FEDMEKADLDIHTKAGWVALLQHYFVSAWIPNQDANNTLYTLTNTKKH-LGSIGYRSAPI 288 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I G + T L+ G K + ++ +D+GW +FIAKP+F L++ Sbjct: 289 VIENGATETIHTQLWTGPKLQDQMADVAN-----HLDLTVDYGWAWFIAKPLFKLLTLIQ 343 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +LV N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + Sbjct: 344 SLVQNWGLAIIGVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERF-GEDRQRMSQE 402 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GW++DL+A DP Sbjct: 403 MMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFMEAVELRHAPFFGWVQDLSAQDPYF-- 460 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I PI+M SMF+ KMSP P AD Q ++ +MP++F+ Sbjct: 461 -----------------ILPILMGASMFLLQKMSPTPVADPMQQKVMTFMPLIFMVFFLF 503 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW SN+I+I QQ +I + + Sbjct: 504 FPAGLVLYWLASNLITIAQQWLIYRGLEKK 533 >gi|66048358|ref|YP_238199.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. syringae B728a] gi|81307749|sp|Q4ZL11|OXAA_PSEU2 RecName: Full=Inner membrane protein oxaA gi|63259065|gb|AAY40161.1| 60 kDa inner membrane protein [Pseudomonas syringae pv. syringae B728a] gi|330970321|gb|EGH70387.1| membrane protein insertase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 563 Score = 349 bits (894), Expect = 1e-93, Method: Composition-based stats. Identities = 141/586 (24%), Positives = 233/586 (39%), Gaps = 54/586 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N + +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59 Query: 58 IDDR-------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A++ + +K L +I+ G L L Y Sbjct: 60 DVPSANATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160 L + + + A+ T V+ L F Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216 +R Y + V N S + ++ R Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWSGNLFAQLKRDASSDPSSTTATGTAT 238 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G + + DI+K + W+ Y+ + +IP + Q + Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQVKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 D Y F++ +++ PG T+ L+AG K + P E+ +D+ Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR A Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ WI DL+ DP I PIIM +MFIQ +++P P D Q Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 A ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|289628218|ref|ZP_06461172.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649108|ref|ZP_06480451.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. aesculi str. 2250] gi|298484605|ref|ZP_07002710.1| integral membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160862|gb|EFI01878.1| integral membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330870071|gb|EGH04780.1| membrane protein insertase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 563 Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats. Identities = 141/586 (24%), Positives = 233/586 (39%), Gaps = 54/586 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N + +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59 Query: 58 IDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A++ + +K L +I+ G L L Y Sbjct: 60 DVPSASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160 L + + + A+ T V+ L F Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216 +R Y + V N S + ++ R Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTAT 238 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G + + DI+K + W+ Y+ + +IP + Q + Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQVKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 D Y F++ +++ PG T+ L+AG K + P E+ +D+ Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR A Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ WI DL+ DP I PIIM +MFIQ +++P P D Q Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 A ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|319945014|ref|ZP_08019276.1| YidC/Oxa1 family membrane protein insertase [Lautropia mirabilis ATCC 51599] gi|319741584|gb|EFV94009.1| YidC/Oxa1 family membrane protein insertase [Lautropia mirabilis ATCC 51599] Length = 561 Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats. Identities = 153/586 (26%), Positives = 262/586 (44%), Gaps = 53/586 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE-----------------MNNERKNIQTV 43 M+++ + + + +++ W N+ Y + + Sbjct: 1 MQQSHKTVLWVVFILSLLFLWNNWQQYNGQPAMFGGSQQAQTAQQNTASAPQDGADTSIP 60 Query: 44 KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY-HLDVS 102 P+Q N A + D+A+ + LKN + I+ G Q L + H + Sbjct: 61 GAPSQAGNDAPASVPADQAEQAKAGQTITLKNDVIELGIDTVGGQIVSSKLLKHIHDTRN 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 +S + + S + + PN T ++ ++ Sbjct: 121 PDSGNLVIQSDRKGSF----FVGQTGLVGVKDAPNHTTPMTVVRTIETDGQVTGVVLAAE 176 Query: 163 ANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEG 219 + ERT L Y K+ + VTN + S ++ R H+ + + G Sbjct: 177 GGGLRIERTYQLSPGSYEIKVDNRVTNIGEQPLSPSLYLQLTRDTHEAPGQSGYYKTYVG 236 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + + DIEK + ++ W+GI Y+ S ++P + + + Sbjct: 237 PAIYTDADKFQKVSFDDIEKGKAKHSGRANDGWVGIIQHYFVSAWVPKQGQPREYYTRRV 296 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 G + Y A I G+S+ + LF G ++ + P ++++D+GW Sbjct: 297 --GPSTYSAGAYEQLGQISAGQSVDASETLFIGPQDQDVLAKVA-----PGLDLVVDYGW 349 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IAKP+F L+++ + +VGN+G AI+ T+ VKL FFPL Y S A M+ +QP+++ Sbjct: 350 LTAIAKPLFWLLTFLHGIVGNWGWAIVALTILVKLAFFPLQAASYRSMAKMRKVQPRLNA 409 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +RE++ L +AM++LYKT INPL GC PIL+QIPVF A+Y V+ S+E+R+AP+ Sbjct: 410 IRERYGD-DRMNLNQAMMELYKTEKINPLGGCLPILVQIPVFIALYWVLLASVEIRNAPW 468 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 GWI DL++ DP I PI+M+ +MF+Q ++P PAD QA Sbjct: 469 IGWIHDLSSPDPLY-------------------ILPILMAGTMFLQTHLNPKPADPVQAK 509 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 ++ +MP++F FP+GL++YW SN+ SI QQ VI + + Sbjct: 510 MMTFMPLIFSVMFFFFPSGLVLYWVVSNIFSIAQQWVITRQIEGKP 555 >gi|258541762|ref|YP_003187195.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-01] gi|256632840|dbj|BAH98815.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-01] gi|256635897|dbj|BAI01866.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-03] gi|256638952|dbj|BAI04914.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-07] gi|256642006|dbj|BAI07961.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-22] gi|256645061|dbj|BAI11009.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-26] gi|256648116|dbj|BAI14057.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-32] gi|256651169|dbj|BAI17103.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654160|dbj|BAI20087.1| translocase inner membrane component YidC [Acetobacter pasteurianus IFO 3283-12] Length = 583 Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats. Identities = 171/581 (29%), Positives = 298/581 (51%), Gaps = 18/581 (3%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +A ALS +++ + + + + P + A Sbjct: 1 MDPKRLILATALSALVLIGYDYLFPQHQPVPPPQPGVHAVAPPAPASSGAAAPAENTQAE 60 Query: 62 AQAL---SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A A RV + P++ G++NL+GA+ DDL L+ Y V +SP V +L+ ++T Sbjct: 61 AAAPVKDGPETRVAINAPAVQGTLNLRGARLDDLVLKHYRETVKPDSPDVRVLNSASTHA 120 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 Y + ++ LP++NT+W SG + P+ L + N + F+ +S+D++Y Sbjct: 121 DYVDFGWRAPSDVSVRLPDANTLWK-ASGTQMDAEHPLTLSWDNGQGLTFDIRMSVDQNY 179 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI----AVLGDKSLVEQKY 234 +F I V N++ + P R+ R T V EG I L + S + Sbjct: 180 MFTISQQVHNSTGQAVALYPFYRVNRGYTPEGTGGMLVHEGPISVIDGRLNEGSYKTVRT 239 Query: 235 SDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + +I+ H+ + W GI+DKYW +P + + + + + A + Sbjct: 240 GGVPPDNIAWSHQGTGGWAGITDKYWLMAVLPDQNANVIGTYGFQAAQGAYQVGFTATAP 299 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + + G++ +T +FAGAKE + YEKDL +P F +D+GW F+ +P+F ++ + Sbjct: 300 VQVAAGQTASTEAHVFAGAKEVRLLEQYEKDLHVPMFWKAVDFGWLSFLTRPVFFVLDWL 359 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 +G+FG+A++ TV VK+ F PL KQ T ++P++D +R + K P +Q+ Sbjct: 360 NEHLGSFGLALLTFTVIVKVAFLPLTIKQMRMTWKTARLKPQVDLIRSRLKD-DPMAMQQ 418 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 ++ LY+ N+N G P+L+Q PVF+ +YK + +++EMRHAPF GW+KDL+A DPTN+ Sbjct: 419 QIMALYRQENVNLFGGFLPLLIQAPVFWCLYKDLYVTIEMRHAPFVGWVKDLSAPDPTNL 478 Query: 474 FTLFGILPFYL---PGFMHVGIWPIIMSLSMFIQMKM--SPPPADKGQAMILNWMPVVFV 528 F LFG++PF F+ +G WPI+ ++F+ K+ S D Q ++ ++P++F Sbjct: 479 FNLFGLVPFDPTHITPFLALGAWPIMYGATLFLMQKVSSSSANMDPSQQKVMMFIPLLFT 538 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG---AEIGL 566 F ++ P GL+IY+ WSN+++ VQQ +I+ A+ L Sbjct: 539 FFMARQPVGLVIYYCWSNILTAVQQVIIISRLKAADAKPQL 579 >gi|330952338|gb|EGH52598.1| membrane protein insertase [Pseudomonas syringae Cit 7] Length = 563 Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats. Identities = 141/586 (24%), Positives = 234/586 (39%), Gaps = 54/586 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N + + +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASSTAPGIPDTAAGTNGSASA 59 Query: 58 IDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A++ + +K L +I+ G L L Y Sbjct: 60 DVPSASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160 L + + + A+ T V+ L F Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216 +R Y + V N S + ++ R Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWSGNLFAQLKRDASSDPSSTTATGTAT 238 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G + + DI+K + W+ Y+ + +IP + Q + Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQVKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 D Y F++ +++ PG T+ L+AG K + P E+ +D+ Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR A Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ WI DL+ DP I PIIM +MFIQ +++P P D Q Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 A ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|253991870|ref|YP_003043226.1| inner membrane protein translocase component YidC [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783320|emb|CAQ86485.1| similar to 60 kda inner-membrane protein yidc of escherichia coli [Photorhabdus asymbiotica] Length = 546 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 134/571 (23%), Positives = 246/571 (43%), Gaps = 54/571 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E N + Q + + + Sbjct: 1 MDSQRNLLL-IALLFVSFLVWQAW------EADKNPQPTTVQATQQTDMPSGENQAVPGS 53 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L +IN +G ++ +L Y + SN P L + Y Sbjct: 54 -----GKGKLITVKTDVLSLTINTRGGDIEEADLLAYPDTLGSNQPFKLL--ETTPAFTY 106 Query: 121 FAELDYVSTANNIELPNSNTV-WNLISGKILTPTTPIKLVFK-----NANNILFERTISL 174 A+ NS + + +L + + + Sbjct: 107 QAQSGLTGKDGPDNPTNSERPLYTTAQDSYVLDNGQDELRIPLNFVAKDGVVYVKTFVLK 166 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQTATNTFGVQEGFIAVLGDKS 228 Y + + N + ++ + G++ + H+ ++N A D + Sbjct: 167 RGEYAISVDYRIHNTTEKPLQMTFFGQLKQNVELPKHRDTGSSNFALHTYRGAAYSSDDN 226 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 ++ +S + W+ + +Y+A+ +IPS S F S Sbjct: 227 KYKKHSFSDIESEPLSVTTKGGWVAMLQQYFATAWIPSANE--TSTFYTASLDKKMAAIG 284 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + + I++ T ++ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 285 YKSAPISVAANSEKTVSSTLWIGPEIQDEMAAVA-----PHLDLSVDYGWLWFISQPLFK 339 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 340 LLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGD-DR 398 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M+ LYK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF GWI DL+A Sbjct: 399 QRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFAGWINDLSAQ 458 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I P++M ++MF+ KMSP D Q I+ +MPV+F Sbjct: 459 DPYY-------------------ILPLLMGVTMFVIQKMSPTTITDPMQQKIMTYMPVMF 499 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 TIFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 530 >gi|270264115|ref|ZP_06192382.1| putative inner membrane protein translocase component YidC [Serratia odorifera 4Rx13] gi|270041764|gb|EFA14861.1| putative inner membrane protein translocase component YidC [Serratia odorifera 4Rx13] Length = 545 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 247/572 (43%), Gaps = 56/572 (9%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ L S +I AWQ + + + N T +Q Sbjct: 1 MDSQRNLFLIALLFVSFMIWQAWQTDNAPQPVAQTTQQTSNTATGDAASQAVP------- 53 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + + L +IN +G + L Y + S++P L + Sbjct: 54 -----ASGQGKLITVNTDVLSLTINTRGGDIEQAKLLAYPDTLGSSTPFQLL--ENTPSF 106 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTIS 173 Y A+ N + T I L F + ++ +T Sbjct: 107 VYQAQSGLTGRNGPDNPANGERPLFQAAQDNYTLPEGQDELRIPLTFTGKDGAVYTKTFV 166 Query: 174 LDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227 L ++ + V N S + + G++ + T +N F + A Sbjct: 167 LKRNHYAVGVDYNVDNKSTAPLELTLFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSSS 226 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 QKY+ +K N W+ + +Y+A+ ++P+ T + F G Sbjct: 227 EDKYQKYA-FDKDENLNVTTQGGWVAMLQQYFATAWVPA--TQGSNTFYTAKPGDNLSTI 283 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F + + + PG L+ G + + P ++ +D+GW +FI++P+F Sbjct: 284 GFKSTPVVVQPGAQQQLNATLWVGPELQDQMAQLA-----PHLDLTVDYGWLWFISQPLF 338 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 339 KLLKFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK 398 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 399 -QRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 457 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 458 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 498 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 499 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 530 >gi|307133251|ref|YP_003885267.1| cytoplasmic insertase into membrane protein, Sec system [Dickeya dadantii 3937] gi|306530780|gb|ADN00711.1| cytoplasmic insertase into membrane protein, Sec system [Dickeya dadantii 3937] Length = 543 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 147/570 (25%), Positives = 249/570 (43%), Gaps = 52/570 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E N QT +Q N A + Sbjct: 1 MDSQRNLLL-IALLFVTFMIWQQW------ETDKNPPAATQTTQQANGAVGDAANQGVP- 52 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G ++ +L Y ++ S+ P L + Y Sbjct: 53 ---ASGQGKLITVKTDVLSLNINTRGGDIEEADLLAYPAELGSSQPFKLL--ETTPAFTY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + I L + +AN + F +T L Sbjct: 108 QAQSGLTGKNGPDNPANGSRPLYTAPADRFELAAGQNELRIPLTYTDANGVSFTKTFVLK 167 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 Y + V N S + + G++ + T +N F + A Sbjct: 168 RGEYALNVEYGVNNASAQPLELTLFGQLKQSIDLPSHRDTGSNNFALHTYRGAAFSSSDD 227 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS + N W+ + +Y+A+ ++P+ + F + G+ F Sbjct: 228 KYRKYSFSDMKENLNITTQGGWVAMLQQYFATAWVPAAAGNNT--FYSANLGNGLAAIGF 285 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 A + + PG L+ G + + P ++ +D+GW +FI++P+F L Sbjct: 286 KAPPVIVQPGSQQNLNATLWVGPEIQDKMATVA-----PHLDLTVDYGWLWFISQPLFKL 340 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 341 LKFLHGFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK-Q 399 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 400 RMSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P + PI+M L+MF KMSP D Q I+ +MPV+F Sbjct: 460 PYY-------------------VLPILMGLTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 500 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I QQ +I + Sbjct: 501 VFFLWFPSGLVLYYIVSNLVTIAQQQLIYR 530 >gi|71736510|ref|YP_277293.1| inner membrane protein translocase component YidC [Pseudomonas syringae pv. phaseolicola 1448A] gi|123634467|sp|Q48BF2|OXAA_PSE14 RecName: Full=Inner membrane protein oxaA gi|71557063|gb|AAZ36274.1| inner membrane protein, 60 kDa [Pseudomonas syringae pv. phaseolicola 1448A] Length = 563 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 142/586 (24%), Positives = 233/586 (39%), Gaps = 54/586 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N + +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59 Query: 58 IDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A++ + +K L +I+ G L L Y Sbjct: 60 DVPSASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160 L + + + A+ T V+ L F Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216 +R Y + V N S + ++ R Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTAT 238 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G + + DI+K I W+ Y+ + +IP + Q + Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQIKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 D Y F++ +++ PG T+ L+AG K + P E+ +D+ Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR A Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ WI DL+ DP I PIIM +MFIQ +++P P D Q Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 A ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|257485603|ref|ZP_05639644.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011891|gb|EGH91947.1| membrane protein insertase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 563 Score = 348 bits (892), Expect = 2e-93, Method: Composition-based stats. Identities = 141/586 (24%), Positives = 233/586 (39%), Gaps = 54/586 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N + +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59 Query: 58 IDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A++ + +K L +I+ G L L Y Sbjct: 60 DVPSASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160 L + + + A+ T V+ L F Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216 +R Y + V N S + ++ R Sbjct: 179 SENGINYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTAT 238 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G + + DI+K + W+ Y+ + +IP + Q + Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQVKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 D Y F++ +++ PG T+ L+AG K + P E+ +D+ Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR A Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ WI DL+ DP I PIIM +MFIQ +++P P D Q Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 A ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|261868618|ref|YP_003256540.1| putative inner membrane protein translocase component YidC [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413950|gb|ACX83321.1| putative inner membrane protein translocase component YidC [Aggregatibacter actinomycetemcomitans D11S-1] Length = 543 Score = 348 bits (891), Expect = 2e-93, Method: Composition-based stats. Identities = 144/569 (25%), Positives = 247/569 (43%), Gaps = 40/569 (7%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + +S I+ WQ Y P+ + V + N+ A Sbjct: 1 MDSRRGLLVIALLFMSFIVYQQWQLDYHTPKPVTTEQTAASASDVPASSNAGNAVIAT-- 58 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + L+N IN G L Y ++ SN+P + L + ++ Sbjct: 59 ----DTQAKGKIITLENDVFCLKINTLGGDVVSSELLKYDAELDSNTPFMLL--QNTPQH 112 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT---PIKLVFKNANNILFERTISLD 175 Y A+ + L + LV+ + Sbjct: 113 VYIAQSGLIGKDGIDTKSGRADYQADGDNFKLADGQNELSVPLVYVKDGVTYRKVFTLKR 172 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + + N S I P G++ +++ N A ++ ++ Sbjct: 173 GEYNIAVNYEINNQSDKTIEVEPYGQLRHTLVESSGNVAMPTYTGGAYSSSETNYKKYSF 232 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +++ + + W+ + Y+ S +IP+++ + + Sbjct: 233 SDMENANLSINTKAGWVAVLQHYFVSAWIPNQDADNQLYTLIDKAN-NIGSIGYRGPVTS 291 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I P + T T+ L+ G K + ++ +D+GW +FIAKP+F L+++ Sbjct: 292 IQPNTTETLTSKLWTGPKLQNEMAQVAN-----HLDLTVDYGWAWFIAKPLFWLLTFIQK 346 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 LV N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M Sbjct: 347 LVHNWGVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKLREMRERF-GEDRQRMSQEM 405 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NPL GC P+LLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 406 MKLYKDEKVNPLGGCLPLLLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY--- 462 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534 I PI+M SMF+ KMSP P AD Q ++ +MP++F+ F Sbjct: 463 ----------------ILPILMGASMFLLQKMSPTPVADPMQQKVMTFMPLIFMVFFLWF 506 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 PAGL++YW SN+I+I+QQ +I + + Sbjct: 507 PAGLVLYWLVSNLITIIQQQLIYRGLEKK 535 >gi|330987015|gb|EGH85118.1| membrane protein insertase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 563 Score = 348 bits (891), Expect = 2e-93, Method: Composition-based stats. Identities = 141/586 (24%), Positives = 234/586 (39%), Gaps = 54/586 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N + +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59 Query: 58 IDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A++ + +K L +I+ G L L Y Sbjct: 60 DVPSASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160 L + + + A+ T V+ L F Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216 +R Y + V N S + + ++ R Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQRWAGNLFAQLKRDASSDPSSTTATGTAT 238 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G + + DI+K + W+ Y+ + +IP + Q + Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQVKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 D Y F++ +++ PG T+ L+AG K + P E+ +D+ Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR A Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ WI DL+ DP I PIIM +MFIQ +++P P D Q Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 A ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|71909810|ref|YP_287397.1| protein translocase subunit yidC [Dechloromonas aromatica RCB] gi|123746663|sp|Q477Q4|OXAA_DECAR RecName: Full=Inner membrane protein oxaA gi|71849431|gb|AAZ48927.1| protein translocase subunit yidC [Dechloromonas aromatica RCB] Length = 547 Score = 348 bits (891), Expect = 2e-93, Method: Composition-based stats. Identities = 150/567 (26%), Positives = 241/567 (42%), Gaps = 36/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 + + + W+N+ Y P+ + P+ + AA Sbjct: 1 MDTRRLILVLIFTFSSFMLWENWQKYNQPKPADAVAAAPVSGAAPTPSAALQAKAAPGTP 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A +S + + L +I+ +G L L Y L K+ Sbjct: 61 PVATPVSTAETFSITTDLLKATISAQGGDLVSLELLNYKEH-DDIQKNFDLFD---AKHQ 116 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178 Y A+ + V T ++L + N I + ++ Y Sbjct: 117 YLAQAGLIGEGLPTHRTTFKHVGGATKLADGTDELKVRLESADQNGIKVAKILTFKRGSY 176 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 L I V N S I ++ R P T G + + Sbjct: 177 LIDIAWEVANGSDKAIAPHAYYQLQRDDLAPAGETKMVSTFTGPAVFTDADKYQKVTFEH 236 Query: 237 IEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 I + N WL + Y+ S ++P +T + + +G +QA Sbjct: 237 IADNKAKFTKTADNGWLAMVQHYFVSAWVPKDKTQREFYMRKV-EGSNVFQAGVIVPVAE 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I PG + L+AG + + P ++++D+GW +A P+F + + Sbjct: 296 IAPGAKGEASVSLYAGPQMQSALKQVA-----PGLDLVVDYGWLTVVAAPIFWALEAIHK 350 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 LVGN+G AI++ T+ +K +FFPL+ Y S A MK + P++ +L+E+F Q L + M Sbjct: 351 LVGNWGWAIVVLTIMIKAVFFPLSAASYKSMAKMKMLTPRLAQLKERFGDDK-QRLNQEM 409 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LY+T +NPL GC PIL+QIPVF A+Y V+ ++EMR AP+ WIKDLA+ADP Sbjct: 410 MKLYQTEKVNPLGGCLPILVQIPVFIALYWVLLGAVEMRGAPWILWIKDLASADPYY--- 466 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 I P+IM +SMF+Q K++P P D QA ++ MP++F F FP Sbjct: 467 ----------------ILPVIMMVSMFVQTKLNPTPPDPIQAKVMMMMPLIFGFMFFWFP 510 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGA 562 AGL++YW +NV+SI QQ I ++ A Sbjct: 511 AGLVLYWVVNNVLSIAQQWQITRLIDA 537 >gi|258544268|ref|ZP_05704502.1| YidC/Oxa1 family membrane protein insertase [Cardiobacterium hominis ATCC 15826] gi|258520506|gb|EEV89365.1| YidC/Oxa1 family membrane protein insertase [Cardiobacterium hominis ATCC 15826] Length = 557 Score = 347 bits (890), Expect = 3e-93, Method: Composition-based stats. Identities = 137/572 (23%), Positives = 244/572 (42%), Gaps = 38/572 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV---YPRIEEMNNERKN-----IQTVKQPNQVDNS 52 M+ N + IA + I WQ + + P + P + Sbjct: 1 MKNNPKLLLYIAAAFIAFLLWQKWQIANLPPTPTTASVPAATDVPQGTPGSDVPAATSGT 60 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 + + D +A + + +K L I KG L Y + + + P+ L Sbjct: 61 RSDIPGDTQADTTANGAVIHVKTDVLELDIANKGGTIVHTTLPAYPENKNGDKPLALLHQ 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVW-NLISGKILTPTTPIKLVFKNANNILFERT 171 + + + L ++ + + + + L ++ + + Sbjct: 121 DNPGRFLLQSGLTAADGGKAPSHHDTFSAAATTYTLADGQDSLVVPLSWQENGITVHKTY 180 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 Y F + V N+S R + + + +P + V AV+ + Sbjct: 181 TFKRGAYDFTLEQKVENHSDKAWRGNAYQQWVFGQPLPSKGLGQVATFTGAVMS---YDD 237 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 Y I+ S N + W+ + Y+ IP++ + F + A Sbjct: 238 DPYEKIKLGSKFNTNTETGWVAMIQHYFLGAIIPAQGQP-QAFFTNTNASSGDNFAGVVG 296 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + PG S + T+ ++ G K + P + +D+G+ + I +PMF +++ Sbjct: 297 ASSEVAPGGSTSFTSQIYIGPKIQKDLKAVA-----PNLDKTVDYGFLFMIGQPMFYVIN 351 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + ++ N+G AI++TT+ +KLLFF + Y S A M+ + P++ ++E++ Q Sbjct: 352 FIHGILHNWGWAIIVTTLLIKLLFFTPSAWAYKSMAKMRRLGPEMQRIKERYGD-DRQAA 410 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 AM++LYK +NP +GC P+LLQIP F A Y V+ S+E+RHAP+ GWI+DL+A DP Sbjct: 411 SMAMMKLYKDEKVNPASGCLPMLLQIPFFIAFYWVLVESVELRHAPWLGWIQDLSAMDPY 470 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 I PII + MF+Q K++PPP D QA ++ +P+VF Sbjct: 471 Y-------------------ILPIINAALMFLQQKLNPPPPDPTQAKVMMMLPLVFGIMF 511 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW+ SN IVQQ ++ K +G Sbjct: 512 MWFPSGLVLYWTVSNAFGIVQQYIMNKRYGER 543 >gi|37528712|ref|NP_932057.1| putative inner membrane protein translocase component YidC [Photorhabdus luminescens subsp. laumondii TTO1] gi|36788151|emb|CAE17278.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 546 Score = 347 bits (890), Expect = 3e-93, Method: Composition-based stats. Identities = 139/571 (24%), Positives = 250/571 (43%), Gaps = 54/571 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E N + Q + +S + Sbjct: 1 MDSQRNLLL-IALLFVSFLVWQAW------EADKNPQPTTVQATQQTDMPSSENQAVPGS 53 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L +IN +G ++ +L Y + SN P L + Y Sbjct: 54 -----GKGKLITVKTDVLSLTINTRGGDIEEADLLAYPDTLGSNQPFKLL--ETTPAFTY 106 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ NS + I + F N I++ +T L Sbjct: 107 QAQSGLTGKDGPDNPMNSERPLYTAAQDSYVLADGQDELRIPMNFVTKNGIVYVKTFVLK 166 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 Y + + N + ++ + G++ + T ++ F + A Sbjct: 167 RGEYAISVDYRIHNTTEKPLQMTFFGQLKQSVELPKHRDTGSSNFALHTYRGAAYSSDDT 226 Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 +KY + + W+ + +Y+A+ ++P S F ++ G Sbjct: 227 KYKKYSFSDIEGESLSVTTKGGWIAMLQQYFATAWVPVANE--TSTFYTVALGKEMAAIG 284 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + + I++ T ++ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 285 YKSAPISVAANSEKTVSSTLWIGPEIQDEMAAVA-----PHLDLSVDYGWLWFISQPLFK 339 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 340 LLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK- 398 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M+ LYK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF GWI DL+A Sbjct: 399 QRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFAGWIHDLSAQ 458 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I P++M ++MFI KMSP D Q I+ +MPV+F Sbjct: 459 DPYY-------------------ILPLLMGVTMFIIQKMSPTTITDPMQQKIMTYMPVIF 499 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 TIFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 530 >gi|90581131|ref|ZP_01236930.1| putative inner membrane protein translocase component YidC [Vibrio angustum S14] gi|90437652|gb|EAS62844.1| putative inner membrane protein translocase component YidC [Vibrio angustum S14] Length = 544 Score = 346 bits (888), Expect = 4e-93, Method: Composition-based stats. Identities = 144/568 (25%), Positives = 239/568 (42%), Gaps = 38/568 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N + IAL + +Q + + + T ++ L D Sbjct: 1 MGSQRN-ILLIALLFVSFLLFQQWNADKTPKPQSQGVAQQSTQSSDIPSHSAEGQPLTDQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 S + +K L +++ G D L Y+ + S P V L + Y Sbjct: 60 T----SSQNLITIKTDVLELTVDTLGGDVVDAKLLKYNNTLDSKDPFVLLNDTDG--HDY 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176 A+ + +++ + + +L F + + Sbjct: 114 IAQSGLIGPNGADSQQGGRAQYSVTAKDFVMSPEQNELRVPMTFTKDGINYTKTFVLKRN 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y + TV NN+ ++ + + A + + ++ D Sbjct: 174 DYAVNVDYTVANNTDKAASVQMYAQLRHKLSDSGGSLTMPTYLGGAYSANDTKYKKYSFD 233 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 K + + W+ I Y+ S +IP SQ + Y T+ Sbjct: 234 DMKDKNLDVAANEGWVAIMQHYFVSAWIPRDGADQTSQVYSTTSNGNGY-IGVRMPIETV 292 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG+S L+ G K + K+ + +D+GW +FIA P+ L+S+ ++L Sbjct: 293 APGQSKEIKATLWVGPKLQNEMAATAKN-----LNLTVDYGWLWFIANPLHKLLSFIHSL 347 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+GIAI++ T V+ +PL K QY S A M+ +QPKI +RE+ Q + M+ Sbjct: 348 VGNWGIAIIILTFIVRGAMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD-DRQRQSQEMM 406 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK +NPL GC PILLQ+P+F A+Y + S+E+RHAPF+GWI DL+A DP Sbjct: 407 ELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHAPFFGWIHDLSAQDPYY---- 462 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 + PI+M ++MF KMSP D Q I+ +MPV+F F FP Sbjct: 463 ---------------VLPILMGITMFFIQKMSPSTVTDPMQQKIMTFMPVMFTFFFLFFP 507 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +GL++YW SN+++++QQ +I + + Sbjct: 508 SGLVLYWLVSNIVTLIQQTIIFRALEKK 535 >gi|73666922|ref|YP_302938.1| putative inner membrane protein translocase component YidC [Ehrlichia canis str. Jake] gi|72394063|gb|AAZ68340.1| protein translocase subunit yidC [Ehrlichia canis str. Jake] Length = 579 Score = 346 bits (888), Expect = 4e-93, Method: Composition-based stats. Identities = 215/587 (36%), Positives = 327/587 (55%), Gaps = 23/587 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A+ LSV+I+ W+ Y + E + + Sbjct: 1 MVEVRNLILAVILSVLIMTGWRFIYDKFFTTQHIIE----DNTNSDTMIPEIDDSFTHKT 56 Query: 61 RAQALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 RA+ + + + L N + GSI+LKGAQFDDL + YH+ SNS + LLSP T+ Sbjct: 57 RAEIIGSNTDIRLNLSNKKIHGSISLKGAQFDDLIFKNYHVTPDSNSDGIILLSPEETEG 116 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YF E ++ + I LPN +++WN L+P P L + N I+F+ I+LD Y Sbjct: 117 VYFIEFGWIDPQHKITLPNHSSIWN-SDQPTLSPNNPATLTWDNKEGIIFKIRITLDNDY 175 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +FKI VTNN+ + P GRI R K T + + EG + + +L E Y I Sbjct: 176 MFKIEQMVTNNTNSIVNLIPYGRINRSKHTTEKSYWISHEGAVGSFSN-TLKEWTYKTIT 234 Query: 239 KSSISNFH------ESNSWLGISDKYWASVFIPSKETSFHSQFK---YLSDGHARYQAKF 289 K + N W+GI DKYW + IP+ F + R+Q F Sbjct: 235 KEKNIRIQSQDRNDDQNQWIGIGDKYWFTALIPNVLQKSKVNFHVKHAKHNSEDRFQVDF 294 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 S + P K++T+T++LFAGAKE + Y+ +L I F+ +D+G YFI KP+F+L Sbjct: 295 SHDNYIAHPNKTVTSTSYLFAGAKELKLLDKYKDNLNIALFDKAVDFGVLYFITKPVFLL 354 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + YFY+ +GNFG+AI+L TV +KL+ FPL+ K YVS +K +QP I +++E K + Sbjct: 355 LEYFYDAIGNFGLAILLLTVVIKLIMFPLSYKAYVSMLKLKYLQPDILKIKELHKNDNDK 414 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + K + ++K +N+NP++G PIL+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL++ D Sbjct: 415 M-SKEISAIFKKNNVNPMSGFVPILIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLSSFD 473 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVV 526 N+ T+FG+L F +P + +GI P+I+ ++M IQ K++ DK QA + ++P + Sbjct: 474 TANVLTMFGLLKFNVP--ICIGILPVILGITMVIQQKLNNSNSLNQDKVQANFMKFLPYI 531 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F+F SSFPAGLIIYW SN I+I+QQ +I + + ++ Sbjct: 532 FIFIFSSFPAGLIIYWICSNSITIIQQLIIKQYASKKFNFQKVVKQE 578 >gi|317494663|ref|ZP_07953075.1| membrane protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917265|gb|EFV38612.1| membrane protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 544 Score = 346 bits (888), Expect = 4e-93, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 242/572 (42%), Gaps = 57/572 (9%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + L S +I AWQ + + N T +Q Sbjct: 1 MDSQRNLLLIALLFVSFMIWQAWQTDNNPQPTAQTAGQTANTTTADASSQAVPES----- 55 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + +K L +IN +G + NL Y + S+ P L + Sbjct: 56 -------GQGKLITVKTDVLSLTINTRGGDIEQANLLAYPATLGSDKPFELL--ETTPDF 106 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTIS 173 Y A+ N + I L + + +++ +T Sbjct: 107 IYQAQSGLTGKNGPDNPANGDRPLYTADQTNFELVNGQDELRIPLTYTAKDGVVYTKTFV 166 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227 L Y + V N+S + + G++ + T ++ F + A Sbjct: 167 LKRGDYAIGVDYKVKNSSAQPLDLTLFGQLKQSIDLPKHRDTGSSNFALHTFRGAAYSSS 226 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 QKY N W+ + +Y+A+ +IP ++ F + G+ Sbjct: 227 DDKYQKY--AFDKDPLNITTKGGWVAMLQQYFATAWIPQTNSTNQ--FYTANLGNGLSAI 282 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F + + PG L+ G + + P ++ +D+GW +FI++P+F Sbjct: 283 GFKGEPVVVAPGTEKNLNATLWVGPEIQSDMAAVA-----PHLDLTVDYGWLWFISQPLF 337 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 338 KLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERIGDDK 397 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+R APF WI DLAA Sbjct: 398 -QRMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRQAPFALWIHDLAA 456 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 457 QDPYY-------------------ILPILMGITMFFIQKMSPTTVTDPMQQKIMTFMPVI 497 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 498 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 529 >gi|330890254|gb|EGH22915.1| membrane protein insertase [Pseudomonas syringae pv. mori str. 301020] Length = 563 Score = 346 bits (888), Expect = 5e-93, Method: Composition-based stats. Identities = 141/586 (24%), Positives = 233/586 (39%), Gaps = 54/586 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N + +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59 Query: 58 IDDRAQ-------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A A++ + +K L +I+ G L L Y Sbjct: 60 DVPSASATANTAAAPLETLAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160 L + + + A+ T V+ L F Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216 +R Y + V N S + ++ R Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTAT 238 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G + + DI+K + W+ Y+ + +IP + Q + Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQVKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 D Y F++ +++ P T+ L+AG K + P E+ +D+ Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPAAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR A Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ WI DL+ DP I PIIM +MFIQ +++P P D Q Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 A ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVVNNTLSIAQQAYITRKIEA 556 >gi|291615646|ref|YP_003518388.1| YidC [Pantoea ananatis LMG 20103] gi|291150676|gb|ADD75260.1| YidC [Pantoea ananatis LMG 20103] gi|327395912|dbj|BAK13334.1| preprotein translocase subunit YidC [Pantoea ananatis AJ13355] Length = 548 Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats. Identities = 141/574 (24%), Positives = 248/574 (43%), Gaps = 57/574 (9%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ + +S +I AWQ + ++ + N Q Sbjct: 1 MDSQRNLFLIAFLFVSFMIWQAWQTDHAPKPLQTQTTQNTNSAAGDAAGQGVP------- 53 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + +K L +IN +G D L Y + S+ P L + Sbjct: 54 -----ASGQGKTITVKTDVLSLTINTRGGDVDQAQLLTYPDKLGSDKPFELL--ETTPSF 106 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTIS 173 Y A+ N + + + F N +++ +T Sbjct: 107 VYQAQSGLTGRNGPDNPNNGARPLYNTAQDHFELAEGQSELRVPMTFTAENGVVYTKTFV 166 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGF--IAVLG 225 Y + + N S + S G++ + T +N F + Sbjct: 167 FKRGDYAVNVDYNINNTSQQPLELSMFGQLKQTIDLPKHRDTGSNNFALHTFRGTAYSTS 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + K+ I + N SN W+ + +Y+A+ ++P T + + G+ Sbjct: 227 ESKYEKIKFDTIADNENLNTTTSNGWVAMLQQYFATAWVPR--TQGTNTLYTSNLGNGVA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +T+ PG T L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSAPVTVAPGAQQTLDATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKFIHSFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL Sbjct: 400 DK-QKQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFILWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYY-------------------ILPILMGITMFFIQKMSPTTVTDPMQQKIMTYMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|320321684|gb|EFW77783.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. glycinea str. B076] Length = 563 Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats. Identities = 142/586 (24%), Positives = 234/586 (39%), Gaps = 54/586 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N + +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59 Query: 58 IDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A++ + +K L +I+ G L L Y Sbjct: 60 DVPSASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160 L + + + A+ T V+ L F Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216 +R + Y + V N S + ++ R Sbjct: 179 SENGVNYIKRFTFKRDLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTAT 238 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G + + DI+K I W+ Y+ + +IP + Q + Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQIKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 D Y F++ +++ PG T+ L+AG K + P E+ +D+ Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR A Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ WI DL+ DP I PIIM +MFIQ +++P P D Q Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 A ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVLNNTLSIAQQAYITRKIEA 556 >gi|254237758|ref|ZP_04931081.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126169689|gb|EAZ55200.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 565 Score = 346 bits (887), Expect = 6e-93, Method: Composition-based stats. Identities = 136/586 (23%), Positives = 236/586 (40%), Gaps = 67/586 (11%) Query: 15 VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS------ 68 ++++ Y P + + Q + + + V + A S + Sbjct: 4 LLVLIDRNKDYGQPELPAASASMNTTQGLPDTPSASGTSSDVPTAQSSAAGSEAADKPVA 63 Query: 69 ---PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD 125 +++K L +I+ +G L L Y + L + + Y A+ Sbjct: 64 VSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFPLF-DNGRERTYLAQSG 122 Query: 126 YVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANNILFERTIS-------- 173 +++ +L F + +R Sbjct: 123 LTGADGPDASSAGRPLFHSAQSSYQLADGQNELVVDLSFSHDGVNYIKRFTFHRGLKADC 182 Query: 174 -------------LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT----FGV 216 + Y + + N S + ++ R ++T Sbjct: 183 SDKEKAQKKIECINENAYQVGVSYLIDNQSGKTWSGNLFAQLKRDGSADPSSTTATGVST 242 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G D + D++K W+ Y+ + ++P+K + Sbjct: 243 YLGAAVWTPDSPYKKISTKDMDKEQFKE-SVQGGWVAWLQHYFVTAWVPTKGEQHQVMTR 301 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 DG Y F+ +++ G + T L+AG K + P E+ +D+ Sbjct: 302 --KDGQGNYIVGFTGPTLSVPAGSKVETDLTLYAGPKLQKHLKELS-----PGLELTVDY 354 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G+ +FIA+P+F L+ + ++L+GN+G +I+ TV +KL FFPL+ Y S A M+ + PK+ Sbjct: 355 GFLWFIAQPIFWLLQHIHSLIGNWGWSIIALTVLIKLAFFPLSAASYRSMARMRAVSPKM 414 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR A Sbjct: 415 QAIKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 473 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ GWI DL+ DP I PI+M +M IQ ++P P D Q Sbjct: 474 PWLGWITDLSVKDPFF-------------------ILPIVMGGTMLIQQMLNPTPPDPMQ 514 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 A ++ MP++F F FPAGL++YW +N +SI QQ I + A Sbjct: 515 AKVMKLMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKIEA 560 >gi|320331114|gb|EFW87085.1| putative inner membrane protein translocase component YidC [Pseudomonas syringae pv. glycinea str. race 4] gi|330881912|gb|EGH16061.1| membrane protein insertase [Pseudomonas syringae pv. glycinea str. race 4] Length = 563 Score = 346 bits (887), Expect = 6e-93, Method: Composition-based stats. Identities = 142/586 (24%), Positives = 233/586 (39%), Gaps = 54/586 (9%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + +AL+++ W Y + N + +A Sbjct: 1 MDI-KRTILIVALAIVTYVGVLKWNQDYGQAAMPTQNVAASTTAPGIPDTAAGTNGSASA 59 Query: 58 IDD-------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A++ + +K L +I+ G L L Y Sbjct: 60 DVPSASATANTAAAPLETPAVASKDLIHVKTDVLDLAIDPVGGDVVQLRLPLYPRRQDRP 119 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK----LVF 160 L + + + A+ T V+ L F Sbjct: 120 DVPFQLF-DNGGERTFLAQSGLTGTNGPDARAAGRPVYTSTQKTYQLADGQDTMVVDLKF 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGV 216 +R Y + V N S + ++ R Sbjct: 179 SENGVNYIKRFTFKRGLYDLVMTYVVDNQSAQPWAGNLFAQLKRDASSDPSSTTATGTAT 238 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G + + DI+K I W+ Y+ + +IP + Q + Sbjct: 239 YLGAALWTAAEPYKKVSMKDIDKGQIKET-VQGGWVAWLQHYFVTAWIPDHNATNAVQTR 297 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 D Y F++ +++ PG T+ L+AG K + P E+ +D+ Sbjct: 298 --KDSQGNYIIGFTSPTLSVAPGAQGETSATLYAGPKSQAVLKELS-----PGLELTVDY 350 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G+ +FIA+P+F L+ + + ++GN+G +I++ T+ +K LFFPL+ Y S A M+ + PK+ Sbjct: 351 GFLWFIAQPIFWLLQHIHAILGNWGWSIIVLTMLIKGLFFPLSAASYKSMARMRAVAPKL 410 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 L+E+ Q + +AM++LYK INPL GC PIL+Q+PVF ++Y V+ S+EMR A Sbjct: 411 ALLKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQA 469 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ WI DL+ DP I PIIM +MFIQ +++P P D Q Sbjct: 470 PWILWITDLSIKDPFF-------------------ILPIIMGATMFIQQRLNPTPPDPMQ 510 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 A ++ MP++F F FPAGL++YW +N +SI QQA I + A Sbjct: 511 AKVMKMMPIIFTFFFLWFPAGLVLYWVLNNTLSIAQQAYITRKIEA 556 >gi|227113120|ref|ZP_03826776.1| putative inner membrane protein translocase component YidC [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227328549|ref|ZP_03832573.1| putative inner membrane protein translocase component YidC [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 544 Score = 346 bits (887), Expect = 6e-93, Method: Composition-based stats. Identities = 135/570 (23%), Positives = 246/570 (43%), Gaps = 51/570 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + + + Sbjct: 1 MDSQRNLLL-IALLFVTFMLWQAWETDKNPPATTQAIQQATNAVTGDATNQGVP------ 53 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + +L Y + S+ P L + ++ Y Sbjct: 54 ---ASGQGKLITVKTDVLSLTINTRGGDIEQAHLLAYPDTLGSDKPFHLL--ETTSEFVY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + I + + A+ + + +T L Sbjct: 109 QAQSGLTGKNGPDNPANGPRPLFTTTQDSFELADGQSELRIPMTYTAADGVTYTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 Y + +V N S + + G++ + T ++ F + A Sbjct: 169 RGDYALNVDYSVNNTSAQPLELTLFGQLKQSIELPKHRDTGSSNFALHTYRGAAFSSSED 228 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS + N + W+ + +Y+A+ +IP+ + F G+ + F Sbjct: 229 KYKKYSFSDMDENLNITTNGGWVAMLQQYFATAWIPTTAGANT--FYTSKLGNGQAAIGF 286 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + + + G L+ G + + P ++ +D+GW +FI++P+F L Sbjct: 287 KSAPVVVAAGSQQDLKTTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKL 341 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + ++ +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 342 LKFLHSFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRLLQPKLQAMRERIGDDK-Q 400 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK+ +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 401 RMSQEMMALYKSEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 460 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 461 PYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 501 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 VFFLWFPSGLVMYYIVSNLVTILQQQLIYR 531 >gi|89074709|ref|ZP_01161167.1| putative inner membrane protein translocase component YidC [Photobacterium sp. SKA34] gi|89049473|gb|EAR55034.1| putative inner membrane protein translocase component YidC [Photobacterium sp. SKA34] Length = 544 Score = 346 bits (887), Expect = 6e-93, Method: Composition-based stats. Identities = 143/568 (25%), Positives = 238/568 (41%), Gaps = 38/568 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N + IAL + +Q + + + T ++ L D Sbjct: 1 MGSQRN-ILLIALLFVSFLLFQQWNADKTPKPQSQGVAQQSTQSSDIPSHSAEGQPLTDQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 S + +K L +++ G D L Y+ + S P V L + Y Sbjct: 60 T----SSQNLITIKTDVLELTVDTLGGDVVDAKLLKYNNTLDSKDPFVLLNDTDG--HDY 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176 A+ + +++ + + +L F + + Sbjct: 114 IAQSGLIGPNGADSQQGGRAQYSVTAKDFVMGPEQNELRVPMTFTKDGINYTKTFVLKRN 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y + TV NN+ ++ + + A + + ++ D Sbjct: 174 DYAVNVDYTVANNTDKAASVQMYAQLRHKLSDSGGSLTMPTYLGGAYSANDTKYKKYSFD 233 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 K + + W+ I Y+ S +IP SQ + + T+ Sbjct: 234 DMKDKNLDVAANEGWVAIMQHYFVSAWIPRDGADQTSQVYSTTSNGNGF-IGVRMPIETV 292 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG+S L+ G K + K+ + +D+GW +FIA P+ L+S+ + L Sbjct: 293 APGQSKAIKATLWVGPKLQNEMAATAKN-----LNLTVDYGWLWFIANPLHKLLSFIHGL 347 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+GIAI++ T V+ +PL K QY S A M+ +QPKI +RE+ Q + M+ Sbjct: 348 VGNWGIAIIILTFIVRGAMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD-DRQRQSQEMM 406 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK +NPL GC PILLQ+P+F A+Y + S+E+RHAPF+GWI DL+A DP Sbjct: 407 ELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHAPFFGWIHDLSAQDPYY---- 462 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 + PI+M ++MF KMSP D Q I+ +MPV+F F FP Sbjct: 463 ---------------VLPILMGITMFFIQKMSPSTVTDPMQQKIMTFMPVMFTFFFLFFP 507 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +GL++YW SN+++++QQ +I + + Sbjct: 508 SGLVLYWLVSNIVTLIQQTIIFRALEKK 535 >gi|157368277|ref|YP_001476266.1| putative inner membrane protein translocase component YidC [Serratia proteamaculans 568] gi|166977412|sp|A8G7P8|OXAA_SERP5 RecName: Full=Inner membrane protein oxaA gi|157320041|gb|ABV39138.1| 60 kDa inner membrane insertion protein [Serratia proteamaculans 568] Length = 545 Score = 346 bits (886), Expect = 7e-93, Method: Composition-based stats. Identities = 138/570 (24%), Positives = 244/570 (42%), Gaps = 52/570 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + + + Q N Sbjct: 1 MDSQRNLLL-IALLFVSFMIWQAWQTDNAPQPVAQTTQ---------QTSNPATGDAASS 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + L +IN +G + L Y + S++P L + Y Sbjct: 51 AVPASGQGKLITVNTDVLSLTINTRGGDIEQAKLLAYPDTLGSSTPFQLL--ETTPAFVY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ N + T I L F + ++ +T L Sbjct: 109 QAQSGLTGRNGPDNPANGERPLFQAAQDSYTLPEGQEELRIPLTFTGKDGAIYTKTFVLK 168 Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 ++ + V N S + + G++ + T +N F + A Sbjct: 169 RNHYAVAVDYNVDNKSTTPLELTLFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSSSDD 228 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 QKY+ +K + W+ + +Y+A+ ++P+ T + F G F Sbjct: 229 KYQKYA-FDKDENLSVTTQGGWVAMLQQYFATAWVPA--TQGSNTFYTAKPGDNLSTIGF 285 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + + + PG L+ G + + P ++ +D+GW +FI++P+F L Sbjct: 286 KSTPVVVQPGAQQQLNATLWVGPELQDQMAQLA-----PHLDLTVDYGWLWFISQPLFKL 340 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 341 LKFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK-Q 399 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 400 RMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 460 PYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFT 500 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 VFFLWFPSGLVLYYIVSNLVTILQQQLIYR 530 >gi|311281728|ref|YP_003943959.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Enterobacter cloacae SCF1] gi|308750923|gb|ADO50675.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Enterobacter cloacae SCF1] Length = 547 Score = 346 bits (886), Expect = 7e-93, Method: Composition-based stats. Identities = 145/572 (25%), Positives = 255/572 (44%), Gaps = 54/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 50 GVPASGQGKLITVKTDVLDLTINTRGGDVEQAELLAYPKELGSNEPFQLL--ETTPQFIY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + I L + + F +T L Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYSVDKDTFVLADGQNEISIPLTWTDKAGNTFTKTFVLK 167 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N+S + S G++ + T ++ F + A Sbjct: 168 RGEYAVNVDYSVKNSSDKPLEISTFGQLKQSINLPTHRDTGSSNFALHTFRGAAYSTPDA 227 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N + W+ + +Y+A+ ++P + + + F + G+ Sbjct: 228 KYEKYKFDTIADNENLNVSAKDGWVAMLQQYFATAWVPRNDGTNN--FYTANLGNGIAAI 285 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + I PG++ T + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 286 GYKSQPTLIQPGQTGTVGSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 340 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 KLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 400 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 401 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 459 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 460 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 500 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 532 >gi|292490140|ref|YP_003533035.1| inner membrane protein YidC [Erwinia amylovora CFBP1430] gi|292901144|ref|YP_003540513.1| inner membrane protein [Erwinia amylovora ATCC 49946] gi|291200992|emb|CBJ48131.1| inner membrane protein [Erwinia amylovora ATCC 49946] gi|291555582|emb|CBA24181.1| Inner membrane protein yidC [Erwinia amylovora CFBP1430] gi|312174333|emb|CBX82586.1| Inner membrane protein yidC [Erwinia amylovora ATCC BAA-2158] Length = 548 Score = 346 bits (886), Expect = 7e-93, Method: Composition-based stats. Identities = 143/574 (24%), Positives = 243/574 (42%), Gaps = 57/574 (9%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ + +S +I AWQ ++ + NQ Sbjct: 1 MDSQRNLFLIAFLFVSFMIWQAWQTDNAPQPLQTQTTQNTASAAGDAANQGVP------- 53 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + +K L +IN +G D L Y + S+ P LL S Sbjct: 54 -----ASGQGKTITVKTDVLSLNINTRGGDIDQAQLLTYPDKLDSDQPF--LLLESTPGF 106 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTIS 173 Y A+ N S I L F N + +T Sbjct: 107 LYQAQSGLTGRNGPDNPANGTRPLYTSSQDHFELADGQSELRIPLTFTAENGASYTKTFV 166 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227 L Y + + N + + S G++ + T ++ F + A Sbjct: 167 LKRGEYAIGVDYQINNTTQQPLEVSMFGQLKQTIDLPKHRDTGSSNFALHTFRGAAYSSS 226 Query: 228 S--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + K+ I + + +N W+ + +Y+A+ ++P S + G+ Sbjct: 227 ETNYEKYKFDTIRDNENLSTTTNNGWVAMLQQYFATAWVPQTAGSNT--LYTSNLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI G L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSAPVTIAAGSRQQLAATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 AA DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 AAQDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|157964068|ref|YP_001504102.1| 60 kDa inner membrane insertion protein [Shewanella pealeana ATCC 700345] gi|189036363|sp|A8HAI0|OXAA_SHEPA RecName: Full=Inner membrane protein oxaA gi|157849068|gb|ABV89567.1| 60 kDa inner membrane insertion protein [Shewanella pealeana ATCC 700345] Length = 545 Score = 346 bits (886), Expect = 7e-93, Method: Composition-based stats. Identities = 137/566 (24%), Positives = 237/566 (41%), Gaps = 39/566 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N + I L + WQ + P+ + +I + + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPQPVAAAQTQSSIPASTVADAHSSDVPDADS 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + L I+ G L + L+ + P V L ++ Sbjct: 60 AVPEATPASKELITVITDQLEIKIDPVGGDIVYSALLSHKLEEKGDDPFVLLEQTNDIY- 118 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISL 174 Y A+ + ++ S + L + + + + + Sbjct: 119 -YIAQSGLIGRDGIDSSVKGRAHFDSASREYKLADGQETLNVPLTYVSDKGVAYTKVFVF 177 Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 Y + + N S Q++ G+I ++ ++ A + E+ Sbjct: 178 TRGKYNIAVDYKINNTSDAQLQVQMYGQIKHSIKKSESSMMMPTYRGGAFSTADTRYEKY 237 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D + W+ + Y+ S ++P + G A F Sbjct: 238 SFDDMADKNLDKSTLGGWVAMLQHYFVSAWVPPANDKNIIFSSVSAGGLAN--IGFRGAL 295 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 I PG + + G K+ + P +++D+G+ +++A P++ L+ +F Sbjct: 296 YDIAPGTEQSIKAEFYVGPKDQEALSALS-----PSLNLVVDYGFLWWLAVPIYKLLMFF 350 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 ++VGN+GIAI+L T+ V+ + +PL K QY S A M+N+QPK+ EL+E+F Q + + Sbjct: 351 QSIVGNWGIAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLAELKERFGD-DRQKMGQ 409 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI DL+ DP Sbjct: 410 AMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQDPYY- 468 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFAL 531 + PI+M +SMF+ KM P P D Q ++ WMPV+F Sbjct: 469 ------------------VMPILMGISMFVMQKMQPMAPTMDPMQVKMMQWMPVIFTVFF 510 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 511 LWFPAGLVLYWLVGNLVAITQQKIIY 536 >gi|308051501|ref|YP_003915067.1| protein translocase subunit yidC [Ferrimonas balearica DSM 9799] gi|307633691|gb|ADN77993.1| protein translocase subunit yidC [Ferrimonas balearica DSM 9799] Length = 539 Score = 346 bits (886), Expect = 8e-93, Method: Composition-based stats. Identities = 136/565 (24%), Positives = 244/565 (43%), Gaps = 39/565 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + I L + WQ + + + + + T + N V S A Sbjct: 1 MDSQRNLIL-IGLLFVSFLLWQQWTLDQAPQAETPAAQTVATADKANDVPQSAAKSAAPA 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A ++++ +L +I+ G L + ++ + + L + + Y Sbjct: 60 GATI--SDRLIQVQTDTLKLTIDATGGDVVYAALPEHKVEQGGDEALTILENENG--FTY 115 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTISL-DE 176 A+ + + L L+F +AN + FE+ + Sbjct: 116 IAQSGLIGLNGPHASGQRPVYQAQAANYTLQDGQDTLVVPLIFTDANGVKFEKRYTFTRG 175 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 HY ++ V N S I+ ++ + ++ + A + E+ D Sbjct: 176 HYDVRVDYLVHNTSDAAIQVQMYSQLKQSIGKSEGSMMMPTYRGGAYSTADTRYEKYAFD 235 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + + W+ + Y+ S ++PS +++ Y + + I Sbjct: 236 KMEKNNLAEATQGGWIAMLQHYFVSAWVPSADSTNDI---YSNVVSGDAIIGVKQPAVQI 292 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG T L+ G K + P +++D+GW +FIA+P+ L+ + +L Sbjct: 293 APGAEQTLGATLYVGPKNQEALSALS-----PTLNLVVDYGWLWFIAQPLHSLLMFLQSL 347 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 V N+G+AI+L T+ ++ +PL K QY S A M+ +QPK+ +L+E+F Q + +AM+ Sbjct: 348 VSNWGVAIILMTLIIRGFMYPLTKAQYTSMAKMRKLQPKLADLKERFGD-DRQRMSQAMM 406 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY+ +NP+ GC P+LLQ P+F A Y V+ S+E+RHAPF+GWI DL+ DP Sbjct: 407 ELYQKEKVNPMGGCLPLLLQFPIFIAFYWVLLESVELRHAPFFGWITDLSVKDPYY---- 462 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--SPPPADKGQAMILNWMPVVFVFALSSF 534 + P++M +SMF KM + D Q I+ +MPV+F F Sbjct: 463 ---------------VLPVLMGISMFAMQKMQPTMATMDPMQQKIMQYMPVMFTVFFLWF 507 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKM 559 P+GL++YW N+++I QQ I + Sbjct: 508 PSGLVLYWLVGNLVAIAQQLFIYRS 532 >gi|259910298|ref|YP_002650654.1| putative inner membrane protein translocase component YidC [Erwinia pyrifoliae Ep1/96] gi|224965920|emb|CAX57453.1| Inner membrane protein OxaA [Erwinia pyrifoliae Ep1/96] gi|283480422|emb|CAY76338.1| Inner membrane protein yidC [Erwinia pyrifoliae DSM 12163] gi|310765879|gb|ADP10829.1| putative inner membrane protein translocase component YidC [Erwinia sp. Ejp617] Length = 548 Score = 345 bits (885), Expect = 1e-92, Method: Composition-based stats. Identities = 144/574 (25%), Positives = 243/574 (42%), Gaps = 57/574 (9%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ + +S +I AWQ ++ + NQ Sbjct: 1 MDSQRNLFLIAFLFVSFMIWQAWQTDNAPQPLQTQTTQNTASAAGDAANQGVP------- 53 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + +K L +IN +G D L Y + S+ P LL S Sbjct: 54 -----ASGQGKTITVKTDVLSLNINTRGGDIDQAQLLTYPDKLGSDQPF--LLLESTPGF 106 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTIS 173 Y A+ N S I L F N + +T Sbjct: 107 LYQAQSGLTGRNGPDNPANGARPLYTSSQDHFELADGQSELRIPLTFTAENGATYTKTFV 166 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227 L Y + + N + + S G++ + T ++ F + A Sbjct: 167 LKRGEYAIGVDYQINNTTQQPLEVSMFGQLKQTIDLPKHRDTGSSNFALHTFRGAAYSSS 226 Query: 228 S--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + K+ I + + SN W+ + +Y+A+ ++P S + G+ Sbjct: 227 ETNYEKYKFDTISDNENLSTTTSNGWVAMLQQYFATAWVPQTAGSNT--LYTSNLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI G L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSAPVTIAAGSQQQLAATLWVGPEIQDRMAAVA-----PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 AA DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 AAQDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|90023654|ref|YP_529481.1| protein translocase subunit yidC [Saccharophagus degradans 2-40] gi|122995696|sp|Q21DG0|OXAA_SACD2 RecName: Full=Inner membrane protein oxaA gi|89953254|gb|ABD83269.1| protein translocase subunit yidC [Saccharophagus degradans 2-40] Length = 557 Score = 345 bits (885), Expect = 1e-92, Method: Composition-based stats. Identities = 142/579 (24%), Positives = 248/579 (42%), Gaps = 49/579 (8%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQT---------------V 43 M N +A L + ++ W F ++ + N+ + T Sbjct: 1 MNWLRNSLIAAILVITYVLFIRWNEFSERQQVPTIANQPAAVTTPAYEAVPSDDAVASSA 60 Query: 44 KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 + + V + +A+ V +K L I+ G + L + D + Sbjct: 61 TEESDVPEVSVSAEPVAAPKAVYQPKLVTVKTDVLEVQIDTNGGDVLQVVLLKHLADKAD 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK---LVF 160 ++ L++ N+ + Y A +++ + L Sbjct: 121 DNQPFVLMT-QNSAHTYVARSGLAGGNGPDGAKKGRAKYSVAKTNYSLNSDDQVVVDLTL 179 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 N + +R YL + +TN + G+I+R + + G++ Sbjct: 180 DQENAQITKRFTFTKSSYLIDVEYIITNRADTPWAAKLYGQIIRDGSEPSYGYMGMRPYL 239 Query: 221 IAVLGDKSLVEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 A + + +K D + W+ + Y+ S +IP K+ + + S Sbjct: 240 GAAITTPEVNYEKVSFDDMDDGPFKVEQKGGWVSLIQHYFISAWIPPKDATNSYELSKSS 299 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G Y +F + T+ P T +AG K + P ++ ID+ + Sbjct: 300 KG--NYVLRFISETTTVAPHSVGTVKAGFYAGPKNIRRLEEIS-----PHLDLTIDYSFL 352 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +FIAKP+F + + + LVGN+G+AI+L TV +K +FF + Y S A M+ +QP + EL Sbjct: 353 WFIAKPLFFALDFIHGLVGNWGVAIILLTVLIKAVFFYPSAMSYRSMAKMRKLQPMMAEL 412 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E++ Q + +++LYK +NP GC PILLQ+PVF ++Y +I S+E+RH PF+ Sbjct: 413 KERY-GEDKQKMSGELMKLYKKEKVNPFGGCLPILLQMPVFISLYWMIMESVELRHQPFF 471 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI+DL+ DP I P++M ++M+IQ K++P P D QA + Sbjct: 472 LWIQDLSVKDPLF-------------------ILPLLMGVTMYIQQKLNPTPPDPMQAKV 512 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + MP+ F F FPAGL++YW +N +SI QQ VI + Sbjct: 513 MQMMPIGFTFLFMFFPAGLVLYWVVNNTLSISQQYVITR 551 >gi|237747151|ref|ZP_04577631.1| preprotein translocase YidC subunit [Oxalobacter formigenes HOxBLS] gi|229378502|gb|EEO28593.1| preprotein translocase YidC subunit [Oxalobacter formigenes HOxBLS] Length = 557 Score = 345 bits (885), Expect = 1e-92, Method: Composition-based stats. Identities = 156/578 (26%), Positives = 248/578 (42%), Gaps = 46/578 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFY-------------VYPRIEEMNNERKNIQTVKQPN 47 M+ + + L++ + W N+ + + T P Sbjct: 1 MDTKKRTTLLLILAISLFMLWDNWQVYRGGTSLIFQHEAKKTDSNVALPEVPVDTAVVPG 60 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + V + + V + L IN +G F +L L Y +V + Sbjct: 61 EAGTPATPVAEVMKEAPKKQAELVTVTTDVLKVQINSEGGVFQNLELLKYPDNVDPEKDM 120 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 + L S Y A+ S + + + L Sbjct: 121 I--LFESVPPRIYLAQTGLTGGVYPNHATRFTVHPGERSLADGKDEVKLVMDAERDGVRL 178 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVLG 225 + Y+ + VTN + + I S +++R +P+ + G Sbjct: 179 TKTYTFKRGSYVVDVDQKVTNLTNEPIDASLYLQLLRDSSRPEGQSRFISTFTGPAVYTQ 238 Query: 226 DKSLVEQKYSDIEKSS--ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + K+ DI ++ N W+ I Y+ S FIP + + K + G Sbjct: 239 ADKFQKLKFDDITETKGADHATKADNGWIAIVQHYFVSAFIPKDKVERENYTKKV--GED 296 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y TI P S + + L+AG +E + P E++ D+GW IA Sbjct: 297 LYAIGTVIPLGTIAPKASASNDSRLYAGPQESIILEQTA-----PGLELVKDYGWLTIIA 351 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F LM++ + VGN+G I+L T +KL+F PL+ Y S A MK P+I ELR+++ Sbjct: 352 KPIFWLMTHIHKEVGNWGWTIILLTCLIKLVFLPLSAASYKSMARMKQFTPRIQELRDRY 411 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K Q + + ++ LYK INPL GC P+++QIPVF ++Y V+ S+E+R+AP+ GWI+ Sbjct: 412 KDDK-QRMNQELMALYKAEKINPLGGCLPVVVQIPVFISLYWVLLASVEIRNAPWLGWIQ 470 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 +LAA DP I PIIM+ SMFIQ KMSPPP D QA ++ ++ Sbjct: 471 NLAAPDPFY-------------------ILPIIMAGSMFIQQKMSPPPPDPLQAKLMMFL 511 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P+VF FP+GL++YW +N++SI QQ I K +G Sbjct: 512 PIVFSITFFFFPSGLVLYWVVNNLLSIAQQYWINKRYG 549 >gi|90413740|ref|ZP_01221728.1| putative inner membrane protein translocase component YidC [Photobacterium profundum 3TCK] gi|90325209|gb|EAS41706.1| putative inner membrane protein translocase component YidC [Photobacterium profundum 3TCK] Length = 538 Score = 345 bits (885), Expect = 1e-92, Method: Composition-based stats. Identities = 137/569 (24%), Positives = 241/569 (42%), Gaps = 42/569 (7%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + L S ++ W P+ + E++ + P+ + Sbjct: 1 MDSQRNILLIALLFVSFLLFQQWNMD-NSPQPQGQGTEQQVNNSGDVPSHSGDGQPI--- 56 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 Q + + + L S++ G + L Y ++ S P + L + Sbjct: 57 --PDQETTSKDVITINTDVLALSVDTLGGDVTEAKLLAYDNELDSADPFILL--KDEAGH 112 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTISLD 175 +Y A+ + + L + + + + Sbjct: 113 SYIAQSGLIGANGIDSANGRAQLAVTAKDFTLADGQDELRVPMTYVKDGITYTKTFVLKR 172 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + T+ N S ++ ++ ++ A D + ++ Sbjct: 173 NSYAVDVEYTIDNQSASAASVQMYAQLRQNLMDDGSSLTMPTYRGGAYSTDTTNYKKYSF 232 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D + N +N W + Y+ S +IP E + + + + + T Sbjct: 233 DDMQDKSLNMTTTNGWAAMLQHYFVSAWIPRSEEASNLFTRASNG---QGYIGVRLPTTT 289 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I G T T+ L+ G K + + + +D+GW +FIA P+ L+S+ + Sbjct: 290 IAAGTEQTITSTLWVGPKLQKEMEATAAN-----LNLTVDYGWLWFIASPLHKLLSFIQS 344 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +VGN+GIAIM+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + M Sbjct: 345 IVGNWGIAIMMLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERLGD-DRQRMSQEM 403 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NPL GC PI+LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 404 MELYKKEKVNPLGGCLPIVLQMPIFIALYWSLMESVELRHSPFFGWIHDLSAQDPYY--- 460 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534 I P++M +SMF+ KMSP D Q I+ +MPV+F F F Sbjct: 461 ----------------ILPLLMGVSMFMIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLWF 504 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+GL++YW SNV++++QQ +I + + Sbjct: 505 PSGLVLYWLVSNVVTLIQQTLIYRSLEKK 533 >gi|156936084|ref|YP_001440000.1| putative inner membrane protein translocase component YidC [Cronobacter sakazakii ATCC BAA-894] gi|166975864|sp|A7MN02|OXAA_ENTS8 RecName: Full=Inner membrane protein oxaA gi|156534338|gb|ABU79164.1| hypothetical protein ESA_03978 [Cronobacter sakazakii ATCC BAA-894] Length = 550 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 146/592 (24%), Positives = 254/592 (42%), Gaps = 55/592 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ V+Q Q + A Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQTW---------EQDKAPKPQVQQTTQTTTTAAGSAASQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ S+ P L + N Sbjct: 51 GVPASGQGKLITVKTDVLSLTINTRGGDIEQALLLAYPKELGSSEPFQLLETTPNFVYQA 110 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175 + L + +N ++N + I + F + F +T +L Sbjct: 111 QSGLTGRNGPDNPNNNKGRPLYNTERDTYVLADGQDELVIPMTFTDEAGNAFTKTFALKR 170 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS-- 228 Y + V N + S G++ + T ++ F + A Sbjct: 171 GQYAVYVGYDVKNAGTQPLEISSFGQLKQTIDLPSHRDTGSSNFALHTFRGAAYSTPDEK 230 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + K+ I N + W+ + +Y+A+ ++P+ S F GH Sbjct: 231 YEKYKFDTIADDENLNVNAKGGWVAMLQQYFATAWVPASN--VTSNFYTADLGHGVAAIG 288 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 289 YKSEPVQVQPGQTAKLASTLWVGPEIQDKMAQVA-----PHLDLTVDYGWLWFISQPLFK 343 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + ++ +GN+G +I+ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 344 LLKWIHSFLGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKIQAMRERLGDDK- 402 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 403 QRMSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQ 462 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +MF KMSP D Q I+ +MPV+F Sbjct: 463 DPYY-------------------ILPILMGATMFFIQKMSPTTVTDPMQQKIMTFMPVIF 503 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 FP+GL++Y+ SN+++I+QQ +I + L S K Sbjct: 504 TVFFLWFPSGLVLYYIVSNLVTILQQQLIYRGLEKR-----GLHSREKKKKA 550 >gi|237749310|ref|ZP_04579790.1| preprotein translocase YidC subunit [Oxalobacter formigenes OXCC13] gi|229380672|gb|EEO30763.1| preprotein translocase YidC subunit [Oxalobacter formigenes OXCC13] Length = 559 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 160/580 (27%), Positives = 255/580 (43%), Gaps = 48/580 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF----------YVYPRIEEMNNERKNIQTVKQPNQVD 50 ME + + L+V + + W N+ + + ++ + + Q V Sbjct: 1 MEAKKRTTLLLILAVSLFFLWDNWQVYRGGKSLIFTQEKAKKSETQTGLPEVPVQTASVT 60 Query: 51 NSYAAVLIDDRAQALSMSPR------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A A P+ V + IN G F +L L Y +V S Sbjct: 61 AEENPAADASNAVAKKEEPKKQPVELVSITTDVFKVQINPDGGVFQNLELLKYPDNVDST 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +V L S Y A+ + + + + + + Sbjct: 121 KDMV--LFESAPPRIYLAQTGLTGGLYPNHATRFHIRPGERTLGENSDEVKLVMDAEQDG 178 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIA 222 L + Y+ + VTN S + I S +++R +P+ + G Sbjct: 179 VRLTKTYTFKRGSYVIDVDQKVTNLSHEPINASLYLQLLRDSERPEGQSRFISTFTGPAV 238 Query: 223 VLGDKSLVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 + + K+ +I + + + N W+G+ Y+ S FIP + + + K + G Sbjct: 239 YSEEDKFQKIKFDNIGEGKMDHAIKTDNGWVGMVQHYFVSAFIPQDKVARENYTKKV--G 296 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 Y TI P S + L+ G +E + P E++ D+GW Sbjct: 297 ENLYAIGTVIPLGTIAPNASASNDTRLYVGPQESKLLEKTA-----PGLELVKDYGWLTI 351 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+F LM++ +N VGN+G I+L T +KL+F PL+ Y S A MK P+I ELRE Sbjct: 352 IAKPIFWLMTHIHNEVGNWGWTIILLTCLIKLIFAPLSAASYRSMAKMKQFTPRITELRE 411 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 ++K Q + K ++ LYK INPL GC P+++QIPVF ++Y V+ S+E+R+AP+ GW Sbjct: 412 RYKDDK-QRMNKELMGLYKAEKINPLGGCLPVVIQIPVFISLYWVLLASVEIRNAPWLGW 470 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I++LAA DP I PIIM+ SMFIQ KMSPPP D QA ++ Sbjct: 471 IQNLAAPDPYY-------------------ILPIIMAGSMFIQQKMSPPPPDPMQAKMMM 511 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++P+ F FP+GL++YW +N++SI QQ I K + Sbjct: 512 FLPIAFSITFFFFPSGLVLYWVVNNLLSIAQQYWITKKYD 551 >gi|242241427|ref|YP_002989608.1| inner membrane protein translocase component YidC [Dickeya dadantii Ech703] gi|242133484|gb|ACS87786.1| 60 kDa inner membrane insertion protein [Dickeya dadantii Ech703] Length = 543 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 149/570 (26%), Positives = 252/570 (44%), Gaps = 52/570 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E +Q N A+ + Sbjct: 1 MDSQRNLLI-IALLFVTFMIWQQW------ETDKTPPAATPITQQANNTVGDAASQGVP- 52 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G ++ +L Y D+ S P L + Y Sbjct: 53 ---ASGQGKLITVKTDVLSLTINTRGGDIEEADLLAYPADLGSKQPFKLL--ETTQAFTY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + I L + +AN I + +T +L Sbjct: 108 QAQSGLTGKNGPDNPANGSRPLFSATQDHFELADGQNDIRIPLTYTDANGISYTKTFALK 167 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 Y + V N S + + G++ + T +N F + A L Sbjct: 168 RGEYALNVEYGVNNTSAQPLELTLFGQLKQSIDLPSHRDTGSNNFALHTYRGAALSSSDD 227 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS + N W+ + +Y+AS +IP+ + F + G+ F Sbjct: 228 KYRKYSFSDMKENLNVATQGGWVAMLQQYFASAWIPAAGGANT--FYTSNLGNGLAAIGF 285 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 A + + PG T L+ G + + P ++ +D+GW +FI++P+F L Sbjct: 286 KATPVIVQPGSQQTLGATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKL 340 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + ++ +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 341 LKFLHSFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK-Q 399 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 400 RMSQEMMALYKAEKVNPLGGCFPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P + PI+M L+MF KMSP D Q I+ +MPV+F Sbjct: 460 PYY-------------------VLPILMGLTMFFIQKMSPTTVTDPMQQKIMTYMPVMFT 500 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++IVQQ +I + Sbjct: 501 VFFLWFPSGLVLYYIVSNLVTIVQQQLIYR 530 >gi|127514791|ref|YP_001095988.1| 60 kDa inner membrane insertion protein [Shewanella loihica PV-4] gi|166977416|sp|A3QJT1|OXAA_SHELP RecName: Full=Inner membrane protein oxaA gi|126640086|gb|ABO25729.1| protein translocase subunit yidC [Shewanella loihica PV-4] Length = 542 Score = 345 bits (883), Expect = 2e-92, Method: Composition-based stats. Identities = 137/564 (24%), Positives = 239/564 (42%), Gaps = 38/564 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + + + A Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQTDKNPQPVATESSVVASTVTDAHSADVPDADAALP 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A A S + + L IN G L G+ L+ P V L + Y Sbjct: 60 EAVAASK-ELISVTTDQLTLKINPVGGDIVYSALVGHKLEQDKEEPFVLLQQTKDIY--Y 116 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175 ++ + ++ S T I L + N + + + +L Sbjct: 117 ISQSGLIGRNGIDSSTKGRAHFSSQSQAYTLADGQDTLEIPLTYVADNGVTYTKVFTLHR 176 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + + + N S +Q++ G+I ++ ++ A + E+ Sbjct: 177 GKFDVGVEYRINNTSAEQLQVQMYGQIKHSIKKSESSMMMPTYRGAAFSTADTRYEKYSF 236 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 + + W + Y+ S ++P + G A F Sbjct: 237 EDMADKNLDKKTLGGWAAMLQHYFVSAWVPPANDQNTIFSSVSAGGLAN--IGFRGAVYD 294 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG T + + G K+ + + +++D+G+ +++A P+ L+ ++ + Sbjct: 295 VAPGTQQTISAQFYVGPKDQEALSAISES-----LNLVVDYGFLWWLAIPIHWLLMFYQS 349 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L T+ V+ + +PL K QY S A M+N+QPK+ +++E+F Q + +AM Sbjct: 350 FVGNWGVAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLQDMKERFGD-DRQKMGQAM 408 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 409 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESYELRHAPFMLWITDLSVQDPYY--- 465 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533 + P++M +SMF+ KM P P D Q ++ WMPV+F Sbjct: 466 ----------------VLPLLMGVSMFLMQKMQPMAPTMDPMQQKMMQWMPVIFTVFFLW 509 Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 510 FPAGLVLYWLVGNLVAITQQKIIY 533 >gi|160877622|ref|YP_001556938.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS195] gi|189036361|sp|A9KX20|OXAA_SHEB9 RecName: Full=Inner membrane protein oxaA gi|160863144|gb|ABX51678.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS195] gi|315269821|gb|ADT96674.1| membrane protein insertase, YidC/Oxa1 family domain containing [Shewanella baltica OS678] Length = 541 Score = 345 bits (883), Expect = 2e-92, Method: Composition-based stats. Identities = 141/564 (25%), Positives = 239/564 (42%), Gaps = 39/564 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + + D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSLVANAANSHSADVPEADTGVP- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + S + +K L IN G L + ++ + P V L + Y Sbjct: 59 -AAVTATSKLITVKTDQLDVQINPIGGDIVFAALVSHKMEQDKDQPFVLLEQTKD--FTY 115 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175 A+ + ++ + + T + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFSTAATEYTLAEGQDTLEVPLTYVADNGVTYTKVFVFHR 175 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + + + N S ++ G+I + + ++ A E+ Sbjct: 176 GKFNVDVDYKINNTSAAPLQVQMYGQIKQTIKPSESSMVMPTYRGGAFSTQDVRYEKYKF 235 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D S N W + Y+ S +IP S + G A F Sbjct: 236 DDMAKSNLNQATLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRGAVYD 293 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I PG + ++ + G K+ + +++D+G+ +++A P+ L+ ++ + Sbjct: 294 IAPGATQEISSQFYVGPKDQKALSAISDT-----LNLVVDYGFLWWLAVPIHWLLMFYQS 348 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + +AM Sbjct: 349 FVGNWGLAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLTDLKERFGD-DRQKMGQAM 407 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NP+ GC PI+LQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 408 MELYKKEKVNPMGGCLPIILQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYY--- 464 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533 I P++M +SMF+ KM P P D Q ++ WMPV+F Sbjct: 465 ----------------ILPLLMGVSMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLW 508 Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 509 FPAGLVLYWLVGNIVAITQQKIIY 532 >gi|253690653|ref|YP_003019843.1| 60 kDa inner membrane insertion protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259515701|sp|C6DK98|OXAA_PECCP RecName: Full=Inner membrane protein oxaA gi|251757231|gb|ACT15307.1| 60 kDa inner membrane insertion protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 544 Score = 345 bits (883), Expect = 2e-92, Method: Composition-based stats. Identities = 136/570 (23%), Positives = 246/570 (43%), Gaps = 51/570 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + + + Sbjct: 1 MDSQRNLLL-IALLFVTFMLWQAWETDKNPPATTQAIQQATNAVTGDATNQGVP------ 53 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + +L Y + S+ P L + ++ Y Sbjct: 54 ---ASGQGKLITVKTDVLSLTINTRGGDVEQAHLLAYPDTLGSDKPFHLL--ETTSEFVY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + I + + A+ + + +T L Sbjct: 109 QAQSGLTGKNGPDNPANGPRPLFTTTQDSFELADGQNELRIPMTYTAADGVTYTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 Y + +V N S + + G++ + T ++ F + A Sbjct: 169 RGDYALNVDYSVNNTSAQPLELTLFGQLKQSIDLPKHRDTGSSNFALHTYRGAAFSSSED 228 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS + N ++ W+ + +Y+A+ +IP+ + F G+ + F Sbjct: 229 KYKKYSFSDMDENLNITTNSGWVAMLQQYFATAWIPTTAGANT--FYTNKLGNGQAAIGF 286 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 A + + G L+ G + + P ++ +D+GW +FI++P+F L Sbjct: 287 KAAPVVVAAGSQQNLNATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKL 341 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 342 LKFLHGFIGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKLQAMRERIGDDK-Q 400 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK+ +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 401 RMSQEMMALYKSEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 460 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 461 PYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 501 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 VFFLWFPSGLVMYYIVSNLVTILQQQLIYR 531 >gi|260595827|ref|YP_003208398.1| membrane protein insertase [Cronobacter turicensis z3032] gi|260215004|emb|CBA26663.1| Inner membrane protein oxaA [Cronobacter turicensis z3032] Length = 549 Score = 345 bits (883), Expect = 2e-92, Method: Composition-based stats. Identities = 146/571 (25%), Positives = 254/571 (44%), Gaps = 50/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N FV IAL + WQ + ++ V+Q Q + A Sbjct: 1 MDSQRNLFV-IALLFVSFMIWQAW---------EQDKAPKPQVQQTTQTTTTAAGSAASQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ S+ P L + N Sbjct: 51 GVPASGQGKLITVKTDVLSLTINTRGGDIEQALLLAYPKELGSSEPFQLLETTPNFIYQA 110 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANNILFERTISLD- 175 + L + +N ++N+ + +L F +A F +T +L Sbjct: 111 QSGLTGRNGPDNPNNNQGRPLYNVERDTYVLADGQDELLIPMTFTDAAGNAFTKTFALKR 170 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS-- 228 Y + V N + S G++ + T +N F + A Sbjct: 171 GQYAVYVGYDVKNAGTQPLEVSSFGQLKQTIDLPSHRDTGSNNFALHTFRGAAYSTPDEK 230 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + K+ I N + W+ + +Y+A+ ++P+ S F GH Sbjct: 231 YEKYKFDTIADDENLNVNAKGGWVAMLQQYFATAWVPASN--VTSNFYTADLGHGVAAIG 288 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 289 YKSEPVQVQPGQTAKLASTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFK 343 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + ++ +GN+G +I+ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 344 LLKWIHSFLGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKIQAMRERLGDDK- 402 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 403 QRMSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQ 462 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +MF KMSP D Q I+ +MPV+F Sbjct: 463 DPYY-------------------ILPILMGATMFFIQKMSPTTVTDPMQQKIMTFMPVIF 503 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 504 TVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 534 >gi|330447273|ref|ZP_08310923.1| inner-membrane protein insertion factor [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491464|dbj|GAA05420.1| inner-membrane protein insertion factor [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 544 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 143/568 (25%), Positives = 238/568 (41%), Gaps = 38/568 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N + IAL + +Q + + + + L D Sbjct: 1 MGSQRN-ILLIALLFVSFLLFQQWNADKNPQPQGQGVAQQASQNSDIPSHSGEGQPLTDQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 S + +K L +++ G D L Y+ + S P V L + Y Sbjct: 60 T----SSQNLITIKTDVLELTVDTLGGDVVDAKLLKYNNTLGSKDPFVLL--SDTNGHDY 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176 A+ + N +++ + + +L F + + Sbjct: 114 IAQSGLIGPNGADSQQNGRAQYSVTAKDFVMGPEQNELRVPMTFTKDGISYTKTFVLKRN 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y + TV NN+ ++ + + A + + ++ D Sbjct: 174 DYAVNVDYTVANNTDKAASVQMYAQLRHKLSDSGGSLTMPTYLGGAYSANDTKYKKYSFD 233 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 K + + W I Y+ S +IP SQ + Y T+ Sbjct: 234 DMKDKNLDVAANEGWAAIMQHYFVSAWIPRDGADQTSQVYSTTSNGNGY-IGVRMPIETV 292 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG+S L+ G K + K+ + +D+GW +FIA P+ L+S+ +++ Sbjct: 293 APGQSKEIKATLWVGPKLQNEMAATAKN-----LNLTVDYGWLWFIASPLHKLLSFIHSI 347 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+GIAI++ T V+ +PL K QY S A M+ +QPKI +RE+ Q + + M+ Sbjct: 348 VGNWGIAIIVLTFIVRGAMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD-DRQRMSQEMM 406 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK +NPL GC PILLQ+P+F A+Y + S+E+RHAPF+GWI DL+A DP Sbjct: 407 ELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHAPFFGWIHDLSAQDPYY---- 462 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 + PI+M ++MF KMSP D Q I+ +MPV+F F FP Sbjct: 463 ---------------VLPILMGITMFFIQKMSPSTVTDPMQQKIMTFMPVMFTFFFLFFP 507 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +GL++YW SN+++++QQ +I + + Sbjct: 508 SGLVLYWLVSNIVTLIQQTIIFRQLEKK 535 >gi|146309633|ref|YP_001190098.1| putative inner membrane protein translocase component YidC [Pseudomonas mendocina ymp] gi|166977399|sp|A4Y1A0|OXAA_PSEMY RecName: Full=Inner membrane protein oxaA gi|145577834|gb|ABP87366.1| protein translocase subunit yidC [Pseudomonas mendocina ymp] Length = 581 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 145/604 (24%), Positives = 243/604 (40%), Gaps = 72/604 (11%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + + +S ++V W Y + + D + Sbjct: 1 MDIQRSILIVALAVVSYLMVLQWNEDYGQAALPAEVSSSTAATPALPDTPADTASTGGDD 60 Query: 59 DDRAQA-----------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 A A + + +K L +I+ +G L L Y Sbjct: 61 IPTAVAEPTAAAVAPTAAASDELIRVKTDVLDLAIDPRGGDIVQLRLPQYPRRQDRPDVP 120 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV---FKNAN 164 L + ++ Y A+ + N + + +W+ LV + N Sbjct: 121 FQLF-DNGSERTYLAQSGLIGQ-NAPDKSSGRALWSSEKQSYEMADGQDSLVVDLTYSEN 178 Query: 165 NILFERTISLDE----------------------HYLFKIVDTVTNNSIDQIRFSPRGRI 202 + + + S Y + + N S + ++ Sbjct: 179 GVSYIKRYSFKRGLNPQCSAREQQLKKPGCVDPSAYQVDVRYLIDNQSDQAWSGNLFAQL 238 Query: 203 MRHKPQT----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKY 258 R G D+ + DI+K S W+ Y Sbjct: 239 KRDNSGDPSSTTATGTATYLGAALWTSDEPYKKVSMKDIDKQSFKET-VQGGWVAWLQHY 297 Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 + + ++PSK+++ Q + D Y F+ + + G T L+AG K + Sbjct: 298 FVTAWVPSKDSTNLVQTR--KDSQGNYIVGFTGPAVQVAAGAQGETGAILYAGPKLQEHL 355 Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 P E+ +D+G+ +F+A+P+F L+ + L+GN+G +I++ T+ +KL+FFPL Sbjct: 356 GKLS-----PGLELTVDYGFLWFLAQPIFWLLEVIHGLLGNWGWSIIVLTIIIKLIFFPL 410 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 + Y S A M+ + PK+ L+E+ Q + +AM++LYK INPL GC PIL+Q+P Sbjct: 411 SAASYRSMARMRAVSPKLQALKEQHGD-DRQKMSQAMMELYKKEKINPLGGCLPILVQMP 469 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 VF A+Y V+ S+EMR AP+ WI DL+ DP I PIIM Sbjct: 470 VFLALYWVLLESVEMRQAPWMFWITDLSIKDPFF-------------------ILPIIMG 510 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MFIQ +++P P D QA +L MP++F F FPAGL++YW +N++SI QQ I + Sbjct: 511 ATMFIQQQLNPTPPDPMQARVLKLMPIIFTFFFLWFPAGLVLYWVVNNILSIGQQWYITR 570 Query: 559 MHGA 562 A Sbjct: 571 KIEA 574 >gi|269962686|ref|ZP_06177031.1| inner membrane protein, 60 kDa [Vibrio harveyi 1DA3] gi|269832609|gb|EEZ86723.1| inner membrane protein, 60 kDa [Vibrio harveyi 1DA3] Length = 540 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 140/570 (24%), Positives = 244/570 (42%), Gaps = 42/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V E+ + + V Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQAVEQAQSSSTLPAPSFADDLDPVPGQQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +A A + + L SI+ G +L Y ++ S+ P V L + + Sbjct: 60 QASA----KTITVTTDVLTLSIDTVGGDVVHADLNKYAAELDSSDPFVLLKDTKG--HQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V + +N+ + + + F + + Sbjct: 114 IAQSGLVGPQGIDLSSTNRPHYNVSADSFTLADGQDELRVPMTFTANGIEYIKTYVFKRG 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y + V NNS + F + ++ + T G D + + Sbjct: 174 SYALNVEYDVVNNSGNNATFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDVRYKKYSFE 233 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S W + Y+A+ +IP E + + + + Sbjct: 234 DMQDRNLSINLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMPNK 290 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ L+++ Sbjct: 291 TIATGDQAKFEATLWVGPKLQNEMAAVA-----PNLDLVVDYGWLWFIAKPLHSLLAFIQ 345 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 405 MMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 535 >gi|183597176|ref|ZP_02958669.1| hypothetical protein PROSTU_00419 [Providencia stuartii ATCC 25827] gi|188023490|gb|EDU61530.1| hypothetical protein PROSTU_00419 [Providencia stuartii ATCC 25827] Length = 549 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 147/571 (25%), Positives = 267/571 (46%), Gaps = 51/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + ++ + K +QT +Q + + AV Sbjct: 1 MDSQRNLLL-IALLFVSFLVWQAW----ESDKAAQDLKTVQTTQQTDMPSSDSQAVT--- 52 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS-PSNTKNA 119 + + +K L IN +G D+ +L Y + S SP L + P A Sbjct: 53 ---SSGQGKLITVKTDVLDLRINTRGGDIDEADLLAYPATLHSESPFRLLETTPDFIYQA 109 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD 175 + N V+++ S + + + F + N +++++T L Sbjct: 110 QSGLIGQHGPDNPDNSNGQRPVYSVESSSFILADGQDELRVPMTFTDKNGVVYQKTYVLK 169 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 HY + + N + + + G++ + + T ++ F + A Sbjct: 170 RGHYNVDVEYNIQNPTAQALNLAFFGQLKQTIQLPKERDTGSSNFALHTYRGAAYSSDES 229 Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 +KY + N W+ + +Y+A+ ++P+ +S F + G Sbjct: 230 NYKKYSFSDIEDKKLNVTTKGGWVAMLQQYFATAWVPASNE--NSTFYTIDLGQKEAIIG 287 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + + +TI + T ++ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 288 YKSQPLTIAANGAGTYSSTLWVGPEIQSEMAEVA-----PHLDLTVDYGWLWFISQPLFK 342 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + + VGN+GIAI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 343 LLKFIHGFVGNWGIAIIIITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK- 401 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M+ LYK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF+GWI+DL+A Sbjct: 402 QRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFFGWIQDLSAQ 461 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I P++M ++MF+ KMSP D Q I+ +MPVVF Sbjct: 462 DPYY-------------------ILPVLMGVTMFVIQKMSPTAVTDPMQQKIMTYMPVVF 502 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 503 TIFFLWFPSGLVLYYIVSNLVTIIQQQIIYR 533 >gi|300115605|ref|YP_003762180.1| membrane protein insertase [Nitrosococcus watsonii C-113] gi|299541542|gb|ADJ29859.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Nitrosococcus watsonii C-113] Length = 545 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 142/568 (25%), Positives = 250/568 (44%), Gaps = 40/568 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFY-------VYPRIEEMNNERKNIQTVKQPNQVDNSYA 54 N+ + AL +++ W + + P + D Sbjct: 1 MENYRLILFSALVLVLFLMWDAWQTDYGPIPLIPPPPQPAASSGESSPAPPEAVPDAPLP 60 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 V D A L +E+K L I + ++ L Y + + + VTLL Sbjct: 61 EVADMDTAPILPDQKTIEVKTDLLAIKIGMASGDLYEVQLLNYPVSLKEPNKPVTLLHKR 120 Query: 115 NTKNAYFAELDYVSTAN---NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + + + + + + E + + L +++ N I +T Sbjct: 121 D-PDLFVTQSGLRAASGPSITHEKVQFSAPKTHYELIEDEGILKVPLTWEDENGIKVTKT 179 Query: 172 ISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 + Y + + N + + R P++ G + ++ Sbjct: 180 YLFRRDSYQIDLNIKIENGTDQAWMGRAYAQFSRTPPESGGMFARSYVGAVFSTNEQEYQ 239 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + D+ S W+ + Y+ + ++P ++ + + K++ + RY Sbjct: 240 KVDFGDLASKSFDR-RSPGGWVAMIQHYFVAAWVPREQGTNYYYGKHVQNS--RYIVGVM 296 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + TI PG+S LF G K + P+ + +D+G +A+P+F LM Sbjct: 297 PPQQTIAPGESGQFNLALFTGPKIQDRLAVVA-----PKLNLTVDYGKLTILAEPLFWLM 351 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 S+F+NLVGN+G AI+L T VKL+FF L++ Y S A M+ +QP++ L+E++ Q Sbjct: 352 SWFHNLVGNWGWAIVLLTFVVKLVFFKLSQTSYRSMARMRKLQPRLLALKERYGD-DRQK 410 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + +AM++LY+ +NP+ GC PI++QIPVF A+Y ++ S+E+R APF WI+DL + DP Sbjct: 411 VGQAMMELYRKEKVNPMGGCLPIVVQIPVFIALYWMLLESVELRQAPFIFWIQDLTSKDP 470 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I P++M +SMF+Q K+SP P D QA ++ MPV+F Sbjct: 471 YY-------------------ILPLLMGVSMFVQQKLSPAPTDPIQAKVMALMPVMFTVF 511 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N++SI QQ I + Sbjct: 512 FVMFPAGLVLYWVVNNILSIAQQWYITR 539 >gi|167626216|ref|YP_001676510.1| 60 kDa inner membrane insertion protein [Shewanella halifaxensis HAW-EB4] gi|189036362|sp|B0TQH1|OXAA_SHEHH RecName: Full=Inner membrane protein oxaA gi|167356238|gb|ABZ78851.1| 60 kDa inner membrane insertion protein [Shewanella halifaxensis HAW-EB4] Length = 544 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 136/566 (24%), Positives = 238/566 (42%), Gaps = 40/566 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N + I L + WQ + P+ + +I + + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADQAPQPVAAAQTQSSIPASTVADSHSSDVPDADS 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + L I+ G L + L+ + + P V L ++ Sbjct: 60 AVPEAITASKELITVFTDQLEIKIDPVGGDIVYSALLSHKLEENGDDPFVLLEQTNDIY- 118 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISL 174 Y A+ + ++ S + T + L + + + + ++ Sbjct: 119 -YIAQSGLIGRDGIDSSVKGRAHFDSASREYKLADGQDTLSVPLTYVSDKGVTYTKSFVF 177 Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 Y + + N S ++ G+I ++ ++ A D E+ Sbjct: 178 TRGKYNIAVDYKINNTSDASLQVQMYGQIKHSIKKSESSMMMPTYLGGAFSTDDIRYEKY 237 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 D + W+ + Y+ S ++P + F Sbjct: 238 SFDDMADKNLDDSTLGGWVAMLQHYFVSAWVPPATEKNIIFSSMKNGLAN---IGFRGEL 294 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 I PG + + G K+ + P +++D+G+ +++A P++ L+ +F Sbjct: 295 HDIAPGSEQVIKSEFYVGPKDQKALSVLS-----PSLNLVVDYGFLWWLAVPIYKLLMFF 349 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 +++VGN+G AI+L T+ V+ L +PL K QY S A M+N+QPK+ EL+E+F Q + + Sbjct: 350 HSIVGNWGFAIILITLTVRGLLYPLTKAQYTSMAKMRNLQPKLAELKERFGD-DRQKMGQ 408 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI DL+ DP Sbjct: 409 AMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQDPYY- 467 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFAL 531 + PI+M +SMF+ KM P P D Q ++ WMPV+F Sbjct: 468 ------------------VLPILMGISMFVMQKMQPMAPTMDPMQVKMMQWMPVIFTVFF 509 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 510 LWFPAGLVLYWLVGNLVAITQQKIIY 535 >gi|290477350|ref|YP_003470271.1| preprotein translocase cooperates with SecYEG and SecDFyajC translocon membrane protein [Xenorhabdus bovienii SS-2004] gi|289176704|emb|CBJ83513.1| preprotein translocase, cooperates with SecYEG and SecDFyajC translocon, membrane component [Xenorhabdus bovienii SS-2004] Length = 537 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 133/574 (23%), Positives = 242/574 (42%), Gaps = 56/574 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E+ N + Q +Q N Sbjct: 1 MDSQRNL-LFIALLFVSFLVWQAW------EKDQNPQPTAQITQQAN----------TPS 43 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + +K L IN +G ++ +L Y + SN P L S + Y Sbjct: 44 SEASSGQGKLITVKTDVLSLHINTRGGDIEEADLLAYPDTLGSNKPFKLL--ESTPEFIY 101 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTP----IKLVFKNANNILFERTISLDE 176 A+ T + +L + + I Sbjct: 102 QAQSGLTGTNGPDNQADRPFYHTTQDSYVLADGQNELRIPMTYTAPDGVVYVKTFILKRG 161 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVE 231 +Y + + N + ++ + G++ + T ++ F + A Sbjct: 162 NYAVSVDYNIDNVTDKPLQMAFFGQLKQSVELPKSRDTGSSNFALHTYRGAAYSSAEAKY 221 Query: 232 QKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 +KY + + W+ + +Y+A+ ++P ++ + + Sbjct: 222 EKYKFGDIEDKALAVTTNGGWVAMLQQYFATAWVPGANSTNTF-YTIDLKNQKMAIIGYK 280 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I P ++ L+ G + + P ++ +D+GW +FI++P+F L+ Sbjct: 281 GETVNIAPNSKQNISSTLWVGPEIQDKMAEVA-----PHLDLTVDYGWLWFISQPLFKLL 335 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPKI +RE+ Q Sbjct: 336 KFLHEFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRLLQPKITAMRERHGD-DRQR 394 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+ LYKT +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF GWI+DL+A DP Sbjct: 395 MSQEMMALYKTEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFIGWIEDLSAQDP 454 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I P++M +MF+ K+SP D Q I+ +MPV+F Sbjct: 455 YY-------------------ILPLLMGATMFVIQKLSPTTVTDPMQQKIMTYMPVMFTV 495 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++Y+ SN+++I+QQ VI + Sbjct: 496 FFLWFPSGLVLYYIVSNLVTIIQQQVIFRSLEKR 529 >gi|24371604|ref|NP_715646.1| inner membrane protein, 60 kDa [Shewanella oneidensis MR-1] gi|38503016|sp|Q8EKT6|OXAA_SHEON RecName: Full=Inner membrane protein oxaA gi|24345354|gb|AAN53091.1|AE015452_4 inner membrane protein, 60 kDa [Shewanella oneidensis MR-1] Length = 541 Score = 344 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 139/564 (24%), Positives = 238/564 (42%), Gaps = 39/564 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + + D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANATTNHSADVPEADTGVP- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + +K L IN G L + L+ + P V L + Y Sbjct: 59 -AAVAATQNLITVKTDQLDVQINPVGGDIVYAALVSHKLEQGKDQPFVLLEQTKD--FTY 115 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175 A+ + ++ + + + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSAKGRAIFAASKTEFTLADGQDSLEVPLTYVAENGVTYTKVFVFHR 175 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + I + N S ++ G+I + + ++ A E+ Sbjct: 176 GKFNVNIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTASVRYEKYNF 235 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 + + N W + Y+ S +IP S + G A F Sbjct: 236 EDMGKNNLNQPTIGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRGAVYD 293 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG + ++ + G K+ + +++D+G+ +++A P+ L+ ++ + Sbjct: 294 VAPGATQEISSQFYVGPKDQKALSALSDT-----LNLVVDYGFLWWLAVPIHWLLMFYQS 348 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + +AM Sbjct: 349 FVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGD-DRQKMGQAM 407 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 408 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYY--- 464 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533 I P++M +SMFI KM P P D Q ++ WMPV+F Sbjct: 465 ----------------ILPLLMGVSMFIMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLW 508 Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557 FP+GL++YW N+++I+QQ +I Sbjct: 509 FPSGLVLYWLVGNIVAIIQQKIIY 532 >gi|156972771|ref|YP_001443678.1| putative inner membrane protein translocase component YidC [Vibrio harveyi ATCC BAA-1116] gi|166977424|sp|A7N0X9|OXAA_VIBHB RecName: Full=Inner membrane protein oxaA gi|156524365|gb|ABU69451.1| hypothetical protein VIBHAR_00436 [Vibrio harveyi ATCC BAA-1116] Length = 540 Score = 344 bits (881), Expect = 3e-92, Method: Composition-based stats. Identities = 138/570 (24%), Positives = 244/570 (42%), Gaps = 42/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V E+ + + V Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQAVEQAQSSSTLPAPSFADELDPVPGQQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +A A + + L SI+ G +L Y ++ S+ P V L + + Sbjct: 60 QASA----KTITVTTDVLTLSIDTVGGDVVHADLNKYSAELDSSDPFVLLKDTKG--HQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V + + + + + + F + + Sbjct: 114 IAQSGLVGPQGIDLSSTNRPHYKVSADSFTLADGQDELRVPMTFTANGIEYIKTYVFKRG 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y + V NNS + F + ++ + T G D + + Sbjct: 174 SYALNVEYDVVNNSGNNATFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDVRYKKYSFE 233 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S W + Y+A+ +IP E + + + + Sbjct: 234 DMQDRNLSINLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMPNK 290 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + ++ ++++D+GW +FIAKP+ L+++ Sbjct: 291 TIATGDQAKFEATLWVGPKLQNEMAAVAEN-----LDLVVDYGWLWFIAKPLHSLLAFIQ 345 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 405 MMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 535 >gi|292493917|ref|YP_003529356.1| hypothetical protein Nhal_3959 [Nitrosococcus halophilus Nc4] gi|291582512|gb|ADE16969.1| 60 kDa inner membrane insertion protein [Nitrosococcus halophilus Nc4] Length = 554 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 153/584 (26%), Positives = 268/584 (45%), Gaps = 53/584 (9%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFY----------------VYPRIEEMNNERKNIQTVKQ 45 N+ F+ AL +++ W + + + + + Sbjct: 1 MENYRLFLFSALILVLFLMWDAWQTDYGPIPLMPPPPQQPSASLKDSSPALPEEVPDAQL 60 Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 P V + + D + +E+K L I + ++ L Y + + + Sbjct: 61 PEGVPGTTPPEMADMDTTPIQPGQTIEVKTDLLTVKIEMASGDLYEVQLLDYPVSLKKPN 120 Query: 106 PIVTLLSPSN-----TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 V+LL ++ T++ A T + S + L+ G+ + + L + Sbjct: 121 EPVSLLHQADPDLFVTQSGLRAVSGPSVTHETAQFSASKAYYELVPGE---DSLVVPLTW 177 Query: 161 KNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 ++ N I +T + Y + + N + P + +R P++ + G Sbjct: 178 EDENGIKVTKTYIFHRDSYEVDLKLKIENGTDQVWTGRPYAQFIRTPPKSDSFFVRSYIG 237 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + + + + D+ S H S W + Y+ + +IP +E S + K++ Sbjct: 238 AVFSTEENEYQKVDFGDLASQSFER-HSSGGWAAMLQHYFVAAWIPREEGSNYYYGKHVR 296 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 RY A ++ T+ PG++ LFAG K + P+ + +D+G Sbjct: 297 GS--RYIAGVMPSQQTVAPGENGEFNLSLFAGPKIQDRLAATA-----PKLNLTVDYGKL 349 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +A+P+F LMS+F++LVGN+G AI+L TV VKL+FF L++ Y S A M+ +QP++ L Sbjct: 350 TILAEPLFWLMSWFHSLVGNWGWAIVLLTVVVKLIFFKLSQTSYRSMARMRKLQPQLLAL 409 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E+ ++ +AM++LY+ +NP+ GC PIL+QIPVF A+Y ++ S+E+RHAPF Sbjct: 410 KERHGDDRHKM-GQAMMELYRKEKVNPMGGCLPILVQIPVFIALYWMLIESVELRHAPFV 468 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI+DL A DP I P++M +SMF+Q K+SP P D QA + Sbjct: 469 FWIQDLTAKDPYY-------------------ILPLLMGVSMFVQQKLSPAPTDPIQAKV 509 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ MPV+F FPAGL++YW +N++SI QQ I + E Sbjct: 510 ISLMPVMFTIFFVLFPAGLVLYWVVNNILSIAQQWYITRQIEKE 553 >gi|126176561|ref|YP_001052710.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS155] gi|153002875|ref|YP_001368556.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS185] gi|217975463|ref|YP_002360214.1| YidC translocase/secretase [Shewanella baltica OS223] gi|304412702|ref|ZP_07394305.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Shewanella baltica OS183] gi|307305833|ref|ZP_07585579.1| membrane protein insertase [Shewanella baltica BA175] gi|166977414|sp|A3DAS8|OXAA_SHEB5 RecName: Full=Inner membrane protein oxaA gi|166977415|sp|A6WUK4|OXAA_SHEB8 RecName: Full=Inner membrane protein oxaA gi|254778161|sp|B8EDW5|OXAA_SHEB2 RecName: Full=Inner membrane protein oxaA gi|125999766|gb|ABN63841.1| protein translocase subunit yidC [Shewanella baltica OS155] gi|151367493|gb|ABS10493.1| 60 kDa inner membrane insertion protein [Shewanella baltica OS185] gi|217500598|gb|ACK48791.1| YidC translocase/secretase [Shewanella baltica OS223] gi|304348912|gb|EFM13327.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Shewanella baltica OS183] gi|306911326|gb|EFN41752.1| membrane protein insertase [Shewanella baltica BA175] Length = 541 Score = 343 bits (880), Expect = 4e-92, Method: Composition-based stats. Identities = 141/564 (25%), Positives = 239/564 (42%), Gaps = 39/564 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + + D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSLVANAANSHSADVPEADTGVP- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + S + +K L IN G L + ++ + P V L + Y Sbjct: 59 -AAVTATSKLITVKTDQLDVQINPIGGDIVFAALVSHKMEQDKDQPFVLLEQTKD--FTY 115 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175 A+ + ++ + + T + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFSTAATEYTLAEGQDTLEVPLTYVADNGVTYTKVFVFHR 175 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + + + N S ++ G+I + + ++ A E+ Sbjct: 176 GKFNVDVDYKINNTSAAPLQVQMYGQIKQTIKPSESSMVMPTYRGGAFSTQDVRYEKYKF 235 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D S N W + Y+ S +IP S + G A F Sbjct: 236 DDMAKSNLNQATLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRGAVYD 293 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I PG + ++ + G K+ + +++D+G+ +++A P+ L+ ++ + Sbjct: 294 IAPGATQEISSQFYVGPKDQKALSAISDT-----LNLVVDYGFLWWLAVPIHWLLMFYQS 348 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + +AM Sbjct: 349 FVGNWGMAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLTDLKERFGD-DRQKMGQAM 407 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NP+ GC PI+LQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 408 MELYKKEKVNPMGGCLPIILQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYY--- 464 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533 I P++M +SMF+ KM P P D Q ++ WMPV+F Sbjct: 465 ----------------ILPLLMGVSMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLW 508 Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 509 FPAGLVLYWLVGNIVAITQQKIIY 532 >gi|315634811|ref|ZP_07890093.1| YidC/Oxa1 family membrane protein insertase [Aggregatibacter segnis ATCC 33393] gi|315476363|gb|EFU67113.1| YidC/Oxa1 family membrane protein insertase [Aggregatibacter segnis ATCC 33393] Length = 542 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 146/569 (25%), Positives = 247/569 (43%), Gaps = 41/569 (7%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + +S I+ WQ Y P+ + E+ T P N+ Sbjct: 1 MDSRRGLLVIALLFMSFIVYQQWQLDYHTPKP--VATEQTVTSTSDVPASSGNNTVIAT- 57 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + L+N IN G L Y ++ SN P V L + ++ Sbjct: 58 ----DTQVKGKVITLENDVFRLKINTLGGDVISSELLKYDAELDSNMPFVLL--QNTPEH 111 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTISLD 175 Y A+ + L LV++ + + Sbjct: 112 VYIAQSGLIGKDGIDTKAGRADYQVEGENFKLADGQNELIVPLVYQKEGVTYRKIFVLKR 171 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + ++N S I P G++ ++ + A ++ ++ Sbjct: 172 GEYDIAVNYEISNQSDKTIEVEPYGQLRHTLVDSSGSVAMPTYTGGAYSSSETNYKKYSF 231 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +++ + + W+ + Y+ S +IP+++ + + Sbjct: 232 SDMENANLSVNTKAGWVAVLQHYFVSAWIPNQDADNQLYTLTDKAN-NIGSIGYRGPVVA 290 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I P + T+ L+ G K + ++ +D+GW +FIAKP+F L+++ Sbjct: 291 IQPNTTEKLTSKLWTGPKLQNEMAQVAD-----HLDLTVDYGWAWFIAKPLFWLLTFIQQ 345 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 LV N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M Sbjct: 346 LVHNWGVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERF-GEDRQRMSQEM 404 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NPL GC P+LLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 405 MKLYKDEKVNPLGGCLPLLLQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY--- 461 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534 I PI+M SMF+ KMSP P AD Q I+N+MP++F+ F Sbjct: 462 ----------------ILPILMGASMFLLQKMSPTPVADPMQQKIMNFMPLIFMVFFLWF 505 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 PAGL++YW SN+I+I+QQ +I + + Sbjct: 506 PAGLVLYWLVSNLITIIQQQLIYRGLEKK 534 >gi|251791812|ref|YP_003006533.1| putative inner membrane protein translocase component YidC [Dickeya zeae Ech1591] gi|247540433|gb|ACT09054.1| 60 kDa inner membrane insertion protein [Dickeya zeae Ech1591] Length = 543 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 147/570 (25%), Positives = 252/570 (44%), Gaps = 52/570 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E N QT + N A + Sbjct: 1 MDSQRNLLL-IALLFVTFMIWQQW------ETDKNPPAATQTTQLANSAVGDAANQGVP- 52 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G ++ +L Y ++SS+ P L + Y Sbjct: 53 ---ASGQGKLITVKTDVLSLNINTRGGDIEEADLLAYPAELSSSQPFKLL--ETTPAFTY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + S I L + +AN + F +T L Sbjct: 108 QAQSGLTGKNGPDNPANGSRPLYTASADRFELPAGQNELRIPLTYTDANGVSFTKTFVLK 167 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 Y + +V N S + + G++ + T +N F + A Sbjct: 168 RGEYALNVEYSVNNASAQPLELALFGQLKQSIDLPSHRDTGSNNFALHTYRGAAFSSSED 227 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS + N + W+ + +Y+A+ ++P+ + F + G+ F Sbjct: 228 KYRKYSFSDMKENLNINTQGGWVAMLQQYFATAWVPTAAANNT--FYSANLGNGLAAIGF 285 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 A + + PG L+ G + + P ++ +D+GW +FI++P+F L Sbjct: 286 KAAPVIVQPGSQQNLNATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKL 340 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 341 LKFLHGFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK-Q 399 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 400 RMSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P + PI+M L+MF KMSP D Q I+ +MPV+F Sbjct: 460 PYY-------------------VLPILMGLTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 500 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I QQ +I + Sbjct: 501 VFFLWFPSGLVLYYIVSNLVTIAQQQMIYR 530 >gi|110835614|ref|YP_694473.1| inner membrane protein [Alcanivorax borkumensis SK2] gi|123149157|sp|Q0VKU7|OXAA_ALCBS RecName: Full=Inner membrane protein oxaA gi|110648725|emb|CAL18201.1| inner membrane protein, 60 kDa, putative [Alcanivorax borkumensis SK2] Length = 582 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 156/604 (25%), Positives = 252/604 (41%), Gaps = 74/604 (12%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYV---YPRIEEMNNERKNIQTVKQPN-------- 47 ME + +S +++ AWQ Y P E E+ N + + Sbjct: 1 MEIQRALVITGIAVVSYLMIQAWQRDYANTASPVPVEQVAEQGNSSSSDSADLPSVQSQT 60 Query: 48 -------QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 Q DN +V D AQ S R+E+ L IN G L L Y Sbjct: 61 DNSIPSAQSDNDLPSVSPADIAQPTPSSQRIEVNTDVLRVEINPVGGDIVRLALPDYPKH 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV- 159 V + L+ N + + N + WN +L Sbjct: 121 VDTPDQPFVLMD--QNSNGTYVAQSGLVGKNGTDSSKGRPHWNSAQQSYRLAEGDNELNV 178 Query: 160 ----FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT---- 211 +++ + +R YL ++ V NN + G+I R Sbjct: 179 DLTLTQDSGAEIIKRYTFEKGSYLIRVSHIVRNNGSTPWTGALYGQIKRDGRDDPGLSKA 238 Query: 212 --NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKE 268 G DK + + D+ + + + WL + Y+ S +IP + Sbjct: 239 GFAPMPTYLGAAYWSADKPYNKLTFDDMSEDDVKLDQTVEGGWLAMVQHYFVSAWIPDAK 298 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 H YL +Y +F + TI PG+ + +AG K+ + P Sbjct: 299 QKNHYSSVYL-KSRDQYLLRFVSPNTTIQPGEESVLYSEFYAGPKQQDNLEAIS-----P 352 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNL--------------VGNFGIAIMLTTVFVKLL 374 M +D+GW +FI++P+F L+ + + VGN+G+AI+L T+ +K + Sbjct: 353 GLNMTVDYGWLWFISQPIFALLVFLQSGEVSVFGMDIDIGGGVGNWGVAIILLTLIIKAI 412 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 FF L+ Y S A M+ + P++ ++E+ K Q Q + L+K INPL GC P+L Sbjct: 413 FFKLSATSYRSMAKMRKVAPEMQRIKEQNKNDK-QKQQMETMNLFKREKINPLGGCLPML 471 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+PVF A+Y V+ S+E+R APF+ WI DL+ DP + P Sbjct: 472 VQMPVFIALYYVLLESVELRQAPFFLWINDLSVMDPYF-------------------VLP 512 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 I+M SMF+Q +++P PAD QA ++ WMP++F + FPAGL++YW +N++SI QQ Sbjct: 513 ILMGASMFLQTRLNPTPADPTQAQVMKWMPMIFAVFMLWFPAGLVLYWLTNNILSIAQQW 572 Query: 555 VIMK 558 +I + Sbjct: 573 IITR 576 >gi|254230607|ref|ZP_04923966.1| inner membrane protein OxaA [Vibrio sp. Ex25] gi|262392790|ref|YP_003284644.1| OxaI/YidC membrane insertion protein [Vibrio sp. Ex25] gi|151936867|gb|EDN55766.1| inner membrane protein OxaA [Vibrio sp. Ex25] gi|262336384|gb|ACY50179.1| OxaI/YidC membrane insertion protein [Vibrio sp. Ex25] Length = 540 Score = 343 bits (879), Expect = 5e-92, Method: Composition-based stats. Identities = 144/570 (25%), Positives = 244/570 (42%), Gaps = 42/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + I L+++ +Q + V E E+ + + V Sbjct: 1 MDSQRN-ILLIGLALVSFLLFQQWQVAKNPEPQAVEQAQSSSTLPAPSFADELDPVPGQQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +A A + + L SI+ G NL Y ++ S+ V L + + Sbjct: 60 QASA----KTITVTTDVLTLSIDTVGGDVVHANLNEYSAELDSSDSFVLLKDDQG--HQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176 A+ V + +N+ + +L F + I Sbjct: 114 IAQSGLVGPQGIDLSSTNRPHYNVSADSFTMADGQDELRVPMTFTTNGIEYTKTYIFKRG 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y + V NNS + F + ++ + T G D + + Sbjct: 174 SYALNVEYDVVNNSGNNATFGMYAHLRQNLMDDGGSITMPTYRGGAYSTEDTRYKKYSFD 233 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S W + Y+A+ +IP E + + + + Sbjct: 234 DMQDRNLSLNLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMPNK 290 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ ML+S+ Sbjct: 291 TIATGDQAKFEATLWVGPKLQDEMAEVA-----PNLDLVVDYGWLWFIAKPLHMLLSFIQ 345 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 405 MMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKGLEKK 535 >gi|301154699|emb|CBW14162.1| cytoplasmic insertase into membrane protein, Sec system [Haemophilus parainfluenzae T3T1] Length = 542 Score = 343 bits (879), Expect = 5e-92, Method: Composition-based stats. Identities = 139/567 (24%), Positives = 254/567 (44%), Gaps = 37/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + + + ++ + Sbjct: 1 MDSRRSLLVLALLFISFLVYQQWQLDKNPPVQQQ---TTEQTTTASSDVPASSSSSAEVV 57 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A + + + L+N ++ G L Y ++ S P V L ++ Y Sbjct: 58 ADSQTKGHIITLENDVFRLKVDTLGGDVISSELLKYDAELGSKEPFVLL--KDTNEHVYI 115 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + L F+ + + + Sbjct: 116 AQSGLIG-KNGIDTKAGRAQYQVSGDNFKLAEGQNELSVPLTFEKDGVTYRKIFVLKRDS 174 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A ++ ++ Sbjct: 175 YDVGVNFEIVNQSGSAIEVEPYGQLKHTLVESSGNVAMPTYTGGAYSSSETNYKKYSFSD 234 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 K + W+ + Y+ S +IP+++ + + + + +++ Sbjct: 235 MKDKNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YSITDSKNNVASIGYRGPVVSVP 293 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G + T T+ L+ G K + ++ +D+GW +FIAKP+F L+++ ++V Sbjct: 294 AGATETITSSLWTGPKLQNKMAEVAN-----HLDLTVDYGWAWFIAKPLFWLLTFIQSIV 348 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 349 SNWGVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKMQEMRERFGD-DRQRMSQEMMK 407 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC P++LQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 408 LYKEEKVNPLGGCLPLILQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY----- 462 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M SMF+ KMSP P AD Q ++N+MP++F+F FPA Sbjct: 463 --------------ILPILMGGSMFLLQKMSPTPVADPMQQKVMNFMPLIFMFFFLWFPA 508 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+IVQQ +I + + Sbjct: 509 GLVLYWLVSNLITIVQQQMIYRGLEKK 535 >gi|294638332|ref|ZP_06716585.1| membrane protein insertase, YidC/Oxa1 family [Edwardsiella tarda ATCC 23685] gi|291088585|gb|EFE21146.1| membrane protein insertase, YidC/Oxa1 family [Edwardsiella tarda ATCC 23685] Length = 555 Score = 343 bits (878), Expect = 6e-92, Method: Composition-based stats. Identities = 139/571 (24%), Positives = 248/571 (43%), Gaps = 56/571 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N F+ +AL + WQ + + + + V S Sbjct: 15 MDSQRNLFL-VALLFVSFLIWQAWQTDHNPQPVAQTAGQSVSDAASQAVPESG------- 66 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L +IN +G + +L Y + SN+P L + + Y Sbjct: 67 ------QGKLITVKTDVLALTINTRGGDIEQADLLAYPATLGSNTPFQLL--ETTPQFIY 118 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ + N + I L + N +++ +T L Sbjct: 119 QAQSGLTGKSGPDNPANGPRPLYNANQTSYEMLPGQDELRIPLTYTAPNGVVYTKTFVLK 178 Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 + + V N+S + + + G++ + T ++ F + A Sbjct: 179 RNDYAIAVDYKVKNDSHEALDLTLFGQLKQSVDLPKHRDTGSSNFALHTFRGAAYSSSDD 238 Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 QKY + N W+ + +Y+A+ +IP + F + G+ + Sbjct: 239 KYQKYSFSDIEDKNLNVQTKGGWVAMLQQYFATAWIPHDSG--VNTFYTANLGNGQAAIG 296 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + A +++ P + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 297 YKAPSVSVAPNTEQVLSTTLWVGPELQSDMAAVA-----PHLDLTVDYGWLWFISQPLFK 351 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ ++ VGN+G AI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 352 LLQLIHSFVGNWGFAIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK- 410 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DLAA Sbjct: 411 QRMSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLAAP 470 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 471 DPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIF 511 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 512 TVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 542 >gi|224827183|ref|ZP_03700278.1| 60 kDa inner membrane insertion protein [Lutiella nitroferrum 2002] gi|224600576|gb|EEG06764.1| 60 kDa inner membrane insertion protein [Lutiella nitroferrum 2002] Length = 550 Score = 343 bits (878), Expect = 6e-92, Method: Composition-based stats. Identities = 143/576 (24%), Positives = 241/576 (41%), Gaps = 41/576 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + I LS+ I+ WQ ++ + QT + +A Sbjct: 1 MDSKRLIIFIVLSMSILLLWQEYFAPKP---TPQQLAKSQTTAGAPGAPAAPSAAAQPAD 57 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A L+ R+ + I+ G L+L ++ ++ P L Y Sbjct: 58 AAKLTSGQRITVSTDLYKAEIDTVGGDLRRLDLLKHNAAEDASKPFE--LFTDKGGRVYV 115 Query: 122 AELDYVSTANNI-ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179 A+ V+ +N + S ++ +KL AN + + + Y Sbjct: 116 AQTGLVAASNPALPTHKTVFTAEKTSYQMNGDKLEVKLTAPEANGVKVSKVYTFKKGAYD 175 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 + ++N+ + + R++R P+ G D + + D+ Sbjct: 176 IDVRYDISNSGSAPVAPTAYFRLLRDGQKPEGEGRFASTFTGPAVYTTDGKFQKVSFDDL 235 Query: 238 EKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFK------YLSDGHARYQAKFS 290 K N W+ + Y+ S +I L + + A Sbjct: 236 TKGKGDYVKSADNGWVSMLQHYFMSAWIIKPLGGQSVCAAGQPCRFELKSSNGLFSAATL 295 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I PG S + T L+AG +EF I E D+GW + A P+F L+ Sbjct: 296 VDLPAIAPGASRSITVPLYAGPEEFDIITKVAD-----GMEYAKDYGWVHIFASPLFWLL 350 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + + LV N+G AI+L T+ VK LF+PL Y S MK + P+++ L+E++ ++ Sbjct: 351 TKLHALVNNWGWAIILLTLTVKALFYPLTAASYRSMGKMKALAPRLERLKEQYGDDRMKM 410 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 Q+A++++YK+ +NPL GC P+++QIPVF +Y + S+E+R AP+ WI DLA DP Sbjct: 411 -QQAVMEMYKSEKVNPLGGCLPMVIQIPVFIGLYWSLLASVELRQAPWTLWINDLARPDP 469 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 + P IM+++MF+Q ++PPPAD QA ++ MP+ F Sbjct: 470 FY-------------------VLPAIMAITMFLQTFLNPPPADPMQAKMMKIMPLAFSAM 510 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 FPAGL++YW +NV+SI QQ I K L Sbjct: 511 FFFFPAGLVLYWVVNNVLSIAQQWYINKQIEKAKKL 546 >gi|254427853|ref|ZP_05041560.1| 60Kd inner membrane protein [Alcanivorax sp. DG881] gi|196194022|gb|EDX88981.1| 60Kd inner membrane protein [Alcanivorax sp. DG881] Length = 582 Score = 343 bits (878), Expect = 6e-92, Method: Composition-based stats. Identities = 147/609 (24%), Positives = 244/609 (40%), Gaps = 74/609 (12%) Query: 1 MERNWNYFV--AIALSVIIVYAWQ---NFYVYPRIEEMNNER---------------KNI 40 ME + +S +++ AWQ P E E+ Sbjct: 1 MEIQRALVITGIAVVSYLMIQAWQRDHADSATPVPVEQVAEQGSPSSADSADLPAPQPET 60 Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 + Q D D + S R+E+ L IN G L L Y Sbjct: 61 ENSIPAAQADGDQPVAPQIDTPDTATSSRRIEVSTDVLRVEINPVGGDIVRLALPDYPKH 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV- 159 + + + SN+ + + N + W+ +L Sbjct: 121 IDTPDQPFVFMDQSNS--GTYVAQSGLVGKNGTDSSKGRPHWSSAQQSYQLAEGSNELNV 178 Query: 160 ----FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT---- 211 ++ + +R YL ++ V NN + G+I R Sbjct: 179 DLTLTQDNGAEIIKRYTFEKGSYLVRVSHIVRNNGSSPWTGALYGQIKRDGSDDPGLSTT 238 Query: 212 --NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKE 268 G +K + + D+ + + + WL + Y+ S +IP + Sbjct: 239 GFAPMPTYLGAAYWNPEKPYNKLTFDDMSEDGVKLDQTVEGGWLAMVQHYFVSAWIPDAK 298 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 H YL +Y +F + T+ PG+ +AG K+ + P Sbjct: 299 QKNHYSSVYLQ-SRDQYLLRFVSPNTTVQPGEESVLYAEFYAGPKQQDNLEAIS-----P 352 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNL--------------VGNFGIAIMLTTVFVKLL 374 M +D+GW +FI++P+F L+ + + VGN+G+AI+L T +K + Sbjct: 353 GLNMTVDYGWLWFISQPIFALLVFLQSGEVSVFGMDIDIGGGVGNWGVAIILLTFIIKAI 412 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 FF L+ Y S A M+ + P++ ++E+ K Q Q + L+K INPL GC P+L Sbjct: 413 FFKLSATSYRSMAKMRKVAPEMQRIKEQNKNDK-QKQQMETMNLFKREKINPLGGCLPML 471 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+PVF A+Y V+ S+E+R APF+ WI DL+ DP + P Sbjct: 472 VQMPVFIALYYVLLESVELRQAPFFLWINDLSVMDPYF-------------------VLP 512 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 I+M SMF+Q +++P PAD QA ++ WMP++F + FPAGL++YW +N++SI QQ Sbjct: 513 ILMGASMFLQTRLNPTPADPTQAQVMKWMPMIFAVFMLWFPAGLVLYWLTNNILSIAQQW 572 Query: 555 VIMKMHGAE 563 +I + E Sbjct: 573 IITRKIENE 581 >gi|300725384|ref|YP_003714723.1| preprotein translocase [Xenorhabdus nematophila ATCC 19061] gi|297631940|emb|CBJ92665.1| preprotein translocase, cooperates with SecYEG and SecDFyajC translocon, membrane component [Xenorhabdus nematophila ATCC 19061] Length = 544 Score = 343 bits (878), Expect = 6e-92, Method: Composition-based stats. Identities = 132/574 (22%), Positives = 244/574 (42%), Gaps = 55/574 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E N + Q +Q + Sbjct: 1 MDSQRNLLL-IALLFVSFLVWQAW------ESDKNPQPAAQITQQTS---------PTLT 44 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + +K L IN +G ++ +L Y + S +P L + + Y Sbjct: 45 SEASNEQGKLITVKTDVLSLHINTRGGDIEEADLLAYPDTLGSQTPFKLL--ETTPEFTY 102 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTP----IKLVFKNANNILFERTISLDE 176 A+ + +L + + + Sbjct: 103 QAQSGLTGANGPDNQAERPLYHTTQNSFVLADGQDELRIPMTYTAPDGVVYVKTFVLKRG 162 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVE 231 +Y + ++ N + ++ + G++ + T ++ F + A Sbjct: 163 NYAVSVDYSINNVTDKPLQMAFFGQLKQSVDVPKHRDTGSSNFALHTYRGAAYSSDEAKY 222 Query: 232 QKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 +KY D +S W+ + +Y+A+ ++P + + + + + Sbjct: 223 EKYKFDEIESKALAVTTKGGWVAMLQQYFATAWVPGEGKTSNF-YTIDLKNQKMAIIGYK 281 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 I I P ++ L+ G + + P ++ +D+GW +FI++P+F L+ Sbjct: 282 GENINIAPNSQQNISSTLWVGPEVQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLL 336 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPKI +RE+F Q Sbjct: 337 KFLHEYIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRLLQPKITAMRERFGD-DRQR 395 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+ LYKT +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF GWI DL+A DP Sbjct: 396 MSQEMMALYKTEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFIGWINDLSAQDP 455 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I P++M ++MF+ K+SP D Q I+ +MPV+F Sbjct: 456 YY-------------------ILPLLMGVTMFVIQKLSPTTVTDPMQQKIMTYMPVMFTV 496 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++Y+ SN+++I+QQ VI + Sbjct: 497 FFLWFPSGLVLYYIVSNLVTIIQQQVIFRSLEKR 530 >gi|120600874|ref|YP_965448.1| 60 kDa inner membrane insertion protein [Shewanella sp. W3-18-1] gi|146295080|ref|YP_001185504.1| 60 kDa inner membrane insertion protein [Shewanella putrefaciens CN-32] gi|166977417|sp|A4YCM2|OXAA_SHEPC RecName: Full=Inner membrane protein oxaA gi|166977419|sp|A1RQE9|OXAA_SHESW RecName: Full=Inner membrane protein oxaA gi|120560967|gb|ABM26894.1| protein translocase subunit yidC [Shewanella sp. W3-18-1] gi|145566770|gb|ABP77705.1| protein translocase subunit yidC [Shewanella putrefaciens CN-32] gi|319428593|gb|ADV56667.1| inner membrane insertase, YidC [Shewanella putrefaciens 200] Length = 541 Score = 343 bits (878), Expect = 7e-92, Method: Composition-based stats. Identities = 142/564 (25%), Positives = 240/564 (42%), Gaps = 39/564 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + V + D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSLVANVASTHSADVPEADTGVPA 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L IN G L + ++ P V L + Y Sbjct: 60 AVAASKN--LITVKTDQLDVQINPVGGDIVFAALVSHKMEQGKEQPFVLLEQTKD--YTY 115 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175 A+ + N + + + T + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSANGRAAFTTSATEFTLAEGQDTLEVPLTYVADNGVTYTKVFVFHR 175 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + + + N S ++ G+I + + ++ A + E+ Sbjct: 176 GKFNVDVDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGGAFSTNDVRYEKYNF 235 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D S N W + Y+ S ++P S + G A F Sbjct: 236 DDMAKSNLNQATLGGWAAMLQHYFVSAWVPPATDSNTIFSSVSAGGLAN--IGFRGAVYD 293 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I PG S ++ + G K+ + + +++D+G+ +++A P+ L+ ++ + Sbjct: 294 IAPGASQEISSQFYVGPKDQAALSAISET-----LNLVVDYGFLWWLAVPIHWLLMFYQS 348 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + +AM Sbjct: 349 FVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLADLKERFGD-DRQKMGQAM 407 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NP+ GC PI+LQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 408 MELYKKEKVNPMGGCLPIILQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYY--- 464 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533 I P++M +SMFI KM P P D Q ++ WMPV+F Sbjct: 465 ----------------ILPLLMGVSMFIMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLW 508 Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557 FP+GL++YW N+++I+QQ +I Sbjct: 509 FPSGLVLYWLVGNIVAIIQQKIIY 532 >gi|51244707|ref|YP_064591.1| hypothetical protein DP0855 [Desulfotalea psychrophila LSv54] gi|50875744|emb|CAG35584.1| conserved hypothetical membrane protein [Desulfotalea psychrophila LSv54] Length = 553 Score = 343 bits (878), Expect = 7e-92, Method: Composition-based stats. Identities = 148/570 (25%), Positives = 253/570 (44%), Gaps = 27/570 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYV----YPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 +AI +S I++ +Q F+ + N + KQ + A V+ Sbjct: 1 METKRALLAIVISFAILFGYQYFFPGLDQPVQTTSETQTTVNGTSAKQAGAIQEITAPVI 60 Query: 58 IDDRAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + PR + + +I+ G L+ + +SP + L++ S T Sbjct: 61 PVVASAKYDRVPRDIVVDTDLYTATISEAGGALKSFVLKEQKETNAEDSPGMQLVNNSKT 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 + Y + A + L S + + K++ ++ ER + D+ Sbjct: 121 -DGYPLTFSWGGAAPSNLLYTSQDSEVRFGSN---GKARLIMTAKSSTGLVIERVYTFDK 176 Query: 177 HYL-FKIVDTVTNNSIDQIRFS-PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 F + V N S ++ S ++ T N V+ + + Sbjct: 177 KTYLFDLDVRVVNQSGQALQGSAQLHQVSVPYESTEDNPAARFLFMGPVVYADGELTEID 236 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 + +F WLG +Y+ S+ +P G ++ + Sbjct: 237 PKDLEDGPQSFMGDIQWLGYESRYFMSMIVPYGLDGQTFTTS---GGADLTKSFIAGGLD 293 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 T+ G + G K+ + D + +++GWF IAKP L+++F+ Sbjct: 294 TLAAGAEKEYKYHVLYGPKKVEMLKSAGYD-----LDKAVNFGWFDIIAKPTLWLLNFFH 348 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + N+GIAI+L T+ K +F+P+ +K S NM+ +QPK+ L+EK K P + K Sbjct: 349 SFTHNYGIAIILVTIMFKGIFWPITQKGMKSMKNMQKLQPKMAALKEKHKD-DPTRMNKE 407 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 ++ LYK + +NPL GC P++LQIPVFFA+YKV+ +S+E+RHAPF WI DL+A D I Sbjct: 408 VMSLYKAYKVNPLGGCLPMVLQIPVFFALYKVLLLSIELRHAPFMFWITDLSAPDRLWIG 467 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 F LP + + ++M SMF+Q K SP AD QA I+ ++PVVF F +F Sbjct: 468 -------FNLPYLGGLPVLTLLMGASMFLQQKFSPTTADPTQAKIMMFLPVVFTFMFLNF 520 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +GL++YW +N++SI+QQ +I + + Sbjct: 521 ASGLVLYWFVNNLLSILQQVLINRDVKHKT 550 >gi|50123363|ref|YP_052530.1| putative inner membrane protein translocase component YidC [Pectobacterium atrosepticum SCRI1043] gi|81693013|sp|Q6CYR0|OXAA_ERWCT RecName: Full=Inner membrane protein oxaA gi|49613889|emb|CAG77341.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 544 Score = 342 bits (877), Expect = 7e-92, Method: Composition-based stats. Identities = 143/570 (25%), Positives = 253/570 (44%), Gaps = 51/570 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E N QT++Q N+ + Sbjct: 1 MDSQRNLLL-IALLFVTFMLWQAW------ETDKNPPATTQTIQQAT---NAVTGDATNQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + +L Y + S+ P L + + Y Sbjct: 51 GVPASGQGKLITVKTDVLSLTINTRGGDVEQAHLLAYPDILGSDKPFHLL--ETTSAFVY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + I + + A+ + + +T L Sbjct: 109 QAQSGLTGKNGPDNPANGSRPLFVTTQDSFELADGQSELRIPMTYTAADGVTYTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 Y + +V N S + + G++ + T +N F + A Sbjct: 169 RGDYALNVDYSVNNTSAQPLELTLFGQLKQSIDLPKHRDTGSNNFALHTYRGAAFSSSED 228 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS + N ++ W+ + +Y+A+ +IP+ + F G+ + F Sbjct: 229 KYKKYSFSDMDEGLNITTNSGWVAMLQQYFATAWIPTTAGANT--FYTSKLGNGQAAIGF 286 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 A + I G L+ G + + P ++ +D+GW +FI++P+F L Sbjct: 287 KAAPVIIAAGSQQNLNATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKL 341 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 342 LKFLHGFIGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKLQAMRERIGDDK-Q 400 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 401 RMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 460 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 461 PYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 501 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 VFFLWFPSGLVMYYIVSNLVTILQQQLIYR 531 >gi|269965283|ref|ZP_06179404.1| inner membrane protein, 60 kDa [Vibrio alginolyticus 40B] gi|269830084|gb|EEZ84312.1| inner membrane protein, 60 kDa [Vibrio alginolyticus 40B] Length = 540 Score = 342 bits (876), Expect = 9e-92, Method: Composition-based stats. Identities = 144/570 (25%), Positives = 244/570 (42%), Gaps = 42/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + I L+++ +Q + V E E+ + + V Sbjct: 1 MDSQRN-ILLIGLALVSFLLFQQWQVAKNPEPQAVEQAQSSSTLPAPSFADELDPVPGQQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +A A + + L SI+ G NL Y ++ S+ V L + + Sbjct: 60 QASA----KTITVTTDVLTLSIDTVGGDVVHANLNEYSAELDSSDSFVLL--KDAQGHQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176 A+ V + +N+ + +L F + I Sbjct: 114 IAQSGLVGPQGIDLSSTNRPHYNVSADSFTMADGQDELRVPMTFTANGIEYTKTYIFKRG 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y + V NNS + F + ++ + T G D + + Sbjct: 174 SYALNVEYDVVNNSGNNATFGMYAHLRQNLMDDGGSITMPTYRGGAYSTEDTRYKKYSFD 233 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S W + Y+A+ +IP E + + + + Sbjct: 234 DMQDRNLSLNLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMPNK 290 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ ML+S+ Sbjct: 291 TIATGDQAKFEATLWVGPKLQDEMAEVA-----PNLDLVVDYGWLWFIAKPLHMLLSFIQ 345 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 405 MMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKGLEKK 535 >gi|254496743|ref|ZP_05109602.1| inner membrane protein, 60 kDa [Legionella drancourtii LLAP12] gi|254354038|gb|EET12714.1| inner membrane protein, 60 kDa [Legionella drancourtii LLAP12] Length = 558 Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats. Identities = 144/585 (24%), Positives = 263/585 (44%), Gaps = 44/585 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV-YPRIEEMNNERKNIQTVKQP-----NQVDNSYA 54 M+ +AL+++ + W + V YP + N Q +P NS Sbjct: 1 MDI-RRIISYMALALVSLSLWNAWQVDYPPQQTTVANSSNQQRTDEPLLPEMGTSGNSAG 59 Query: 55 AVLIDDRAQAL--SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A L++ A+ +P V++K L +I+L+ L Y L V + LL Sbjct: 60 ATLVNPVAEQTRTQSAPLVQVKTDVLNVAIDLQQGDIVSGQLLDYPLSVDEKNKPFPLLQ 119 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFER 170 + +++ ++ + ++ + L K + + + Sbjct: 120 DDANERYVANSNLFIAAGQAVKALDFAFTTEQPQYELAANQNQLVVTLNGKEDDLAVSKE 179 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA----VLGD 226 I YL + + N + + +++R P+ ++ + G Sbjct: 180 FIFTKGSYLIDVNYKIVNKGSSEWKGYMNTQLLRSSPKEDKSSVFHVGSYTGASYSEPGK 239 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + +SD+ K+++ + W+ + Y+ S +IP + + ++ Y Sbjct: 240 HHYQKVSFSDMGKANLD-VDSNGGWIAMQQHYFLSAWIPDAQGRNKFYTRSINGD---YT 295 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + I + P + T L+ G + + P ++ +D+G +F++ + Sbjct: 296 IGAVSQPIVVQPQEQKTVGAKLYVGPEITSVLKGIA-----PSLDLTVDYGILWFVSSLL 350 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F LM + YN+VGN+G +I+L TV +KL F+ L+ Y S A M+ +QPK+ LRE++ Sbjct: 351 FSLMKWIYNVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMAGMRKLQPKLQALRERYGDD 410 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + + +A ++LYK +NPL GC PI++QIPVF A+Y V+ S+E+R APF WIKDLA Sbjct: 411 KAK-ISQATMELYKQEKVNPLGGCLPIVIQIPVFIALYWVLLESVELRQAPFIFWIKDLA 469 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 +ADP + + P+IM +M IQ K++P P D QA ++ ++PV+ Sbjct: 470 SADPFH-------------------VLPLIMGATMLIQQKLNPAPPDPMQAKVMMFLPVL 510 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 F +FPAGL++YW +N +SI+QQ I + + E + + Sbjct: 511 FTGLFWNFPAGLVLYWIVNNTLSILQQWYITRKYADEKPVKKLVA 555 >gi|325577779|ref|ZP_08148054.1| YidC/Oxa1 family membrane protein insertase [Haemophilus parainfluenzae ATCC 33392] gi|325160524|gb|EGC72650.1| YidC/Oxa1 family membrane protein insertase [Haemophilus parainfluenzae ATCC 33392] Length = 542 Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats. Identities = 139/567 (24%), Positives = 253/567 (44%), Gaps = 37/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + + + ++ + Sbjct: 1 MDSRRSLLVLALLFISFLVYQQWQLDKNPPVQQQ---TTEQTTTASSDVPASSSSSAEVV 57 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A + + + L+N ++ G L Y ++ S P V L ++ Y Sbjct: 58 ADSQTKGHIITLENDVFRLKVDTLGGDVISSELLKYDAELGSKEPFVLL--KDTNEHVYI 115 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + L + + + + Sbjct: 116 AQSGLIG-KNGIDTKAGRAQYQVTGDNFKLAEGQNELSVPLTLEKDGVTYRKIFVLKRDS 174 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A ++ ++ Sbjct: 175 YDVGVNFEIVNQSGSAIEVEPYGQLKHTLVESSGNVAMPTYTGGAYSSSETNYKKYSFSD 234 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 K + W+ + Y+ S +IP+++ + + + + ++I Sbjct: 235 MKDKNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YSITDSKNNVASIGYRGPVVSIP 293 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G + T T+ L+ G K + ++ +D+GW +FIAKP+F L+++ ++V Sbjct: 294 AGATETITSSLWTGPKLQNKMAEVAN-----HLDLTVDYGWAWFIAKPLFWLLTFIQSIV 348 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 349 SNWGVAIICVTLVVKAILYPLTKAQYTSMAKMRMLQPKMQEMRERFGD-DRQRMSQEMMK 407 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC P++LQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 408 LYKEEKVNPLGGCLPLILQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY----- 462 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M SMF+ KMSP P AD Q ++N+MP++F+F FPA Sbjct: 463 --------------ILPILMGGSMFLLQKMSPTPVADPMQQKVMNFMPLIFMFFFLWFPA 508 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW SN+I+IVQQ +I + + Sbjct: 509 GLVLYWLVSNLITIVQQQMIYRGLEKK 535 >gi|261823805|ref|YP_003261911.1| inner membrane protein translocase component YidC [Pectobacterium wasabiae WPP163] gi|261607818|gb|ACX90304.1| membrane protein insertase, YidC/Oxa1 family domain containing [Pectobacterium wasabiae WPP163] Length = 543 Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats. Identities = 134/570 (23%), Positives = 242/570 (42%), Gaps = 52/570 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + + + Sbjct: 1 MDSQRNLLL-IALLFVTFMLWQAWETDKNPPATTQAIQQATNAVTGDATNQGVP------ 53 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + +L Y + S+ P L + + Y Sbjct: 54 ---ASGQGKLITVKTDVLSLTINTRGGDVEQAHLLAYPDTLGSDKPFHLL--ETTPEFVY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + I + + A+ + + +T L Sbjct: 109 QAQSGLTGKNGPDNPANGPRPLFTTTQDSFELADGQSELRIPMTYTAADGVTYTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 Y + +V N S + + G++ + T ++ F + A Sbjct: 169 RGDYALNVDYSVNNTSAQPLELTLFGQLKQSTELPKHRDTGSSNFALHTYRGAAFSSSED 228 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +KYS + N ++ W+ + +Y+A+ +IP+ + + A F Sbjct: 229 KYKKYSFGDMDEGLNITTNSGWVAMLQQYFATAWIPTTAGANTFFTSKDNGQAA---IGF 285 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 A + + G L+ G + + P ++ +D+GW +FI++P+F L Sbjct: 286 KATPVVVAAGSQQNLNATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKL 340 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + + +GN+G +I+ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 341 LKFLHGFIGNWGFSIIAITFIVRGVMYPLTKAQYTSMAKMRLLQPKLQAMRERIGDDK-Q 399 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 400 RMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 460 PYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTYMPVIFT 500 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 VFFLWFPSGLVMYYIVSNMVTILQQQLIYR 530 >gi|53802852|ref|YP_115424.1| inner membrane protein, 60 kDa [Methylococcus capsulatus str. Bath] gi|81680702|sp|Q602M6|OXAA_METCA RecName: Full=Inner membrane protein oxaA gi|53756613|gb|AAU90904.1| inner membrane protein, 60 kDa [Methylococcus capsulatus str. Bath] Length = 545 Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats. Identities = 143/553 (25%), Positives = 249/553 (45%), Gaps = 40/553 (7%) Query: 14 SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVEL 73 S ++ WQ Y + + P + + + V + A S R+ + Sbjct: 16 SFLLWEQWQIDYGPKPQAVAQTDGASRPAGDLPQRPSDDESDVTVHTEAPTQEGSRRIRV 75 Query: 74 KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI 133 L I+ +G L+L Y + V LL+ + + A+ ++ A Sbjct: 76 HTDVLSLEIDTRGGDLRQLDLLNYPVSKEQPDRPVRLLTDQG--DIFVAQSGFIGAAQ-- 131 Query: 134 ELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTN 188 ++PN +++W +G+ + L + + + +T L YL + T+ N Sbjct: 132 QVPNHHSLWQAEAGEYRLQDGQDILRVPLTWSDGQGVTVTKTYILRRGSYLIDMEQTIDN 191 Query: 189 NSIDQIRFSPRGRIMRHKPQ---TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 S ++ R +P + G + DKS + + D+ ++ Sbjct: 192 RSNTNWTGRQYMQLQRKEPTSAQEDSQFIRTYTGGVLHTEDKSYEKIAFKDMASGNLDA- 250 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 W+ + Y+ + ++P E S F + + + + G S T Sbjct: 251 KSRQGWIAMIQHYFLAAWVPPAEDE--STFYTKALADRVFVIGAYSPPAEVPAGSSQTLK 308 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 LFAG K + P E+ D+G IAKP++ L+ F+ N+G AI+ Sbjct: 309 ARLFAGPKLQHVLEGIA-----PGLELTADFGILTVIAKPIYWLLETFHGFFNNWGWAII 363 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 T+ +K LFF L++ Y S ANM+ +QPK+ EL+E++ Q +AM++LY+ +N Sbjct: 364 FVTLVIKALFFKLSEASYRSMANMRKLQPKLVELKERY-GEDRQRYNQAMMELYRKEKVN 422 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC PIL+QIPVF ++Y V+ S+++R APF W+ DL++ DP Sbjct: 423 PLGGCLPILVQIPVFISLYWVLVESVDLRQAPFLLWLDDLSSKDPYF------------- 469 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + P+IM +SMFIQ +++PPP D QA ++ + P+VF FP+GL++YW + Sbjct: 470 ------VLPLIMGVSMFIQQRLNPPPTDPIQARVMQFFPLVFTVFFLFFPSGLVLYWVVN 523 Query: 546 NVISIVQQAVIMK 558 N++SI+QQ I + Sbjct: 524 NILSIIQQWYITR 536 >gi|269140892|ref|YP_003297593.1| 60 kDa inner membrane insertion protein [Edwardsiella tarda EIB202] gi|267986553|gb|ACY86382.1| 60 kDa inner membrane insertion protein [Edwardsiella tarda EIB202] gi|304560650|gb|ADM43314.1| OxaI/YidC membrane insertion protein [Edwardsiella tarda FL6-60] Length = 541 Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats. Identities = 142/571 (24%), Positives = 250/571 (43%), Gaps = 56/571 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N F+ +AL + WQ + + + + V S Sbjct: 1 MDSQRNLFL-VALLFVSFLIWQAWQTDNNPQPVAQTAGQSVSDTASQAVPESG------- 52 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L +IN +G + +L Y + SN+P L + + Y Sbjct: 53 ------QGKLITVKTDVLALTINTRGGDIEQADLLAYPATLGSNTPFQLL--ETTPQFVY 104 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ + N + I L + AN +++ +T L Sbjct: 105 QAQSGLTGKSGPDNPANGARPLYSANQTSYEMLPGQDELRIPLTYTAANGVIYTKTFVLK 164 Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 + + V N+S D + + G++ + T +N F + A Sbjct: 165 RNDYAIAVDYKVKNDSHDALDLTLFGQLKQSVDLPKHRDTGSNNFALHTFRGAAYSSSDD 224 Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 QKY + N W+ + +Y+A+ +IP + F + G+ + Sbjct: 225 KYQKYSFSDIEDKNLNVQTKGGWVAMLQQYFATAWIPHDSG--VNTFYTANLGNGQAAIG 282 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + A +++ P + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 283 YKAPSVSVAPNTEKVLSTTLWVGPELQSDMAAVA-----PHLDLTVDYGWLWFISQPLFK 337 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ ++ VGN+G AI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 338 LLQLIHSFVGNWGFAIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK- 396 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M+ LYK+ +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DLAA Sbjct: 397 QRMSQEMMALYKSEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLAAP 456 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 457 DPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIF 497 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 498 TVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 528 >gi|311109680|ref|YP_003982533.1| preprotein translocase subunit YidC [Achromobacter xylosoxidans A8] gi|310764369|gb|ADP19818.1| preprotein translocase subunit YidC [Achromobacter xylosoxidans A8] Length = 558 Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats. Identities = 143/587 (24%), Positives = 246/587 (41%), Gaps = 48/587 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY--------PRIEEMNNERKNIQTVKQPNQVDNS 52 M+ + + S ++ W N+ ++ P +E + P+ Sbjct: 1 MDI-RRTVLWMIFSFSLLLLWNNWQIHNGKPSLFGPTPAATTSEPQAAANNATPSVPSAP 59 Query: 53 YAAVLIDDRAQALS-----MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 A + S V + L + + GAQ L Y + P Sbjct: 60 VPATAAASAVPGAAAPVAARSEEVVITTDVLRLTFDTMGAQLVRAELLKYPATGQPDKPT 119 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNANN 165 V L Y + V N P T + ++S + + ++ Sbjct: 120 VLL--DRAAGLNYVVQTGVVGAPNGQSFPTHQTPFRIVSSERQLTGDNLVVAFEGESGGV 177 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAV 223 + + Y + + N + + ++ R P ++ + GF Sbjct: 178 KVTKTFTLHRGRYDVDVRHDLANVGAAPVSPALYLQLERDGNDPADTSSFYHTFTGFAVY 237 Query: 224 LGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + +SDIEK S N W+ + Y+A+ ++P + ++ + Sbjct: 238 SEQDKFQKITFSDIEKKKASYIKQSDNGWIAVVQHYFATAWVPPQGKQRTNELLEVQKN- 296 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y A+ I PG + + L+ G ++ + P E+++D+GW I Sbjct: 297 -LYAARSIEAVGEIAPGAATRVDSHLWVGPQDQKAMAALA-----PGLELVVDYGWLTII 350 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+F LM++ ++L+GN+G I+ TV +K +F+PLA Y S A MK + P++ L+EK Sbjct: 351 AKPLFKLMTWLHSLLGNWGWTIVALTVLIKAVFYPLAAASYRSMARMKQVAPRLQALKEK 410 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q L AM+++Y+T INPL GC P+++QIPVF ++Y V+ S+EMR AP+ W+ Sbjct: 411 YGDDK-QKLNAAMMEMYRTEKINPLGGCLPMVVQIPVFISLYWVLLASVEMRGAPWILWV 469 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ DP I P IM +MF+Q+K++P P D QA ++ Sbjct: 470 HDLSIRDPYF-------------------ILPAIMMATMFLQIKLNPTPPDPIQAKVMMI 510 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 MP+VF + FPAGL++YW +N +SI QQ I + + Sbjct: 511 MPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWSITRAMQRKTEAAAN 557 >gi|152979764|ref|YP_001345393.1| putative inner membrane protein translocase component YidC [Actinobacillus succinogenes 130Z] gi|171704505|sp|A6VR61|OXAA_ACTSZ RecName: Full=Inner membrane protein oxaA gi|150841487|gb|ABR75458.1| 60 kDa inner membrane insertion protein [Actinobacillus succinogenes 130Z] Length = 537 Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats. Identities = 137/553 (24%), Positives = 244/553 (44%), Gaps = 41/553 (7%) Query: 15 VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELK 74 I +Q + + + + E Q+ + ++ A + + + L+ Sbjct: 14 FISFLVYQQWEIDKAPKPVVRETAVSQSDTPNSSSASTSAV-------DSQAKGRVITLQ 66 Query: 75 NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE 134 N ++ G + L Y +++ L + T Y A+ V Sbjct: 67 NDVFRLKVDTLGGDVIESELLNYAQELNGEERFTLLENKDGT--TYVAQSGLVGKNGIDS 124 Query: 135 LPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSI 191 + F+ I + + Y + + N S Sbjct: 125 AAGRADYQVNGDNFVLAEGQDELSVPFTFEKDGVIYRKIFMLKRGSYDIAVNYEIRNQSD 184 Query: 192 DQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251 + I P G++ +++ + A ++ ++ D K + + + W Sbjct: 185 ETIEVQPYGQLKHTLVESSGSMAMPTYTGGAYSSSETNYKKYSFDDMKGANLSVNTKAGW 244 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 + + Y+ S +IP+++ Y + + F +T+ G + T L+ G Sbjct: 245 VAVLQHYFVSAWIPNQDADNQL---YTTTNNGMGFIGFRGPTVTVPAGATETVKTALWTG 301 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 K + + ++ +D+GW +FIAKP+F L++ +LV N+G+AI+ T+ V Sbjct: 302 PKLQNQMGEVAE-----HLDLTVDYGWAWFIAKPLFALLTLIQSLVSNWGLAIIGVTLVV 356 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 K + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK +NPL GC Sbjct: 357 KAILYPLTKAQYTSMAKMRMLQPKLQEMRERFGD-DRQRMSQEMMKLYKEEKVNPLGGCL 415 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 P+L+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 416 PLLIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------------------- 456 Query: 492 IWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 I P++M SMF+ K+SP P AD Q ++N+MPV+F FPAGL++YW SNVI+I Sbjct: 457 ILPLLMGGSMFLLQKLSPTPVADPMQQKVMNFMPVIFTVFFLWFPAGLVLYWLVSNVITI 516 Query: 551 VQQAVIMKMHGAE 563 +QQ +I + + Sbjct: 517 IQQQLIYRGLEKK 529 >gi|114049516|ref|YP_740066.1| protein translocase subunit yidC [Shewanella sp. MR-7] gi|123030126|sp|Q0HPE6|OXAA_SHESR RecName: Full=Inner membrane protein oxaA gi|113890958|gb|ABI45009.1| protein translocase subunit yidC [Shewanella sp. MR-7] Length = 541 Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats. Identities = 141/564 (25%), Positives = 236/564 (41%), Gaps = 39/564 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + + D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANATTNHSADVPEADTGVPA 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L IN G L + L+ + P V L + Y Sbjct: 60 AMTATQN--LITVKTDQLDVQINPVGGDIVFAALVSHKLEQGKDQPFVLLEQTKD--FTY 115 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175 A+ + + + T + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFAASKTEFTLADGQDTLEVPLTYVADNGVTYTKVFVFHR 175 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + I + N S ++ G+I + + ++ A E+ Sbjct: 176 GKFNVDIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTQDVRYEKYKF 235 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 + S N W + Y+ S +IP S + G A F Sbjct: 236 EDMSKSNLNQPTLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRGAVYD 293 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I PG + ++ + G K+ + +++D+G+ +++A P+ L+ ++ + Sbjct: 294 IAPGATQEISSQFYVGPKDQKALSALSDT-----LNLVVDYGFLWWLAVPIHWLLMFYQS 348 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + +AM Sbjct: 349 FVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGD-DRQKMGQAM 407 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 408 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYY--- 464 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533 I P++M +SMF+ KM P P D Q ++ WMPV+F Sbjct: 465 ----------------ILPLLMGVSMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLW 508 Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557 FP+GL++YW N+++I+QQ +I Sbjct: 509 FPSGLVLYWLVGNIVAIIQQKIIY 532 >gi|113972267|ref|YP_736060.1| protein translocase subunit yidC [Shewanella sp. MR-4] gi|123129963|sp|Q0HD64|OXAA_SHESM RecName: Full=Inner membrane protein oxaA gi|113886951|gb|ABI41003.1| protein translocase subunit yidC [Shewanella sp. MR-4] Length = 541 Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats. Identities = 141/564 (25%), Positives = 235/564 (41%), Gaps = 39/564 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + + D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANATTNHSADVPEADTGVPA 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L IN G L + L+ + P V L + Y Sbjct: 60 AMTATQN--LITVKTDQLDVQINPVGGDIVFAALVSHKLEQGKDQPFVLLEQTKD--FTY 115 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175 A+ + + + T + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFAASKTEFTLADGQDTLEVPLTYVADNGVTYTKVFVFHR 175 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + I + N S ++ G+I + + ++ A E+ Sbjct: 176 GKFNVDIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTQDVRYEKYKF 235 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 + S N W + Y+ S +IP S + G A F Sbjct: 236 EDMSKSNLNQPTLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRGAVYD 293 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I PG + ++ + G K+ + +++D+G+ +++A P+ L+ ++ + Sbjct: 294 IAPGATQEISSQFYVGPKDQKALSALSDT-----LNLVVDYGFLWWLAVPIHWLLMFYQS 348 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + +AM Sbjct: 349 FVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGD-DRQKMGQAM 407 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 408 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYY--- 464 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KM P P D Q ++ WMPV+F Sbjct: 465 ----------------ILPLLMGASMFVMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLW 508 Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557 FP+GL++YW N+++I+QQ +I Sbjct: 509 FPSGLVLYWLVGNIVAIIQQKIIY 532 >gi|317401604|gb|EFV82230.1| inner membrane protein oxaA [Achromobacter xylosoxidans C54] Length = 561 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 142/590 (24%), Positives = 251/590 (42%), Gaps = 51/590 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV---YPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + + S ++ W N+ + P + + P +N+ +V Sbjct: 1 MDI-RRTVLWMIFSFSLLLLWNNWQIHNGKPSLFGAPTPTASTNANGTPAAANNATPSVP 59 Query: 58 ID-------------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A + S V + L + + GAQ L Y ++ Sbjct: 60 NAPPATAAAPSAVPGAAAPVPTRSEEVVITTDVLRLTFDTLGAQLVRAELLKYPATGQAD 119 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWN--LISGKILTPTTPIKLVFKN 162 P V L Y A+ V AN P T + ++ + + ++ Sbjct: 120 KPTVLL--DRTAGLNYVAQTGVVGAANGQNFPTHQTPFRVVSTDRQMTGDSLAVAFEAES 177 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGF 220 + + Y + + N + + ++ R P ++ + G Sbjct: 178 GGVKVTKTFTLHRGRYDIDVRHDLANVGAAPVTPALYLQLERDGNDPADTSSFYHTFTGM 237 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + ++DIEK + + N W+ + Y+A+ ++P + +++ + Sbjct: 238 AVYSEQDKFQKMTFADIEKKKANYIKQADNGWIAVVQHYFATAWVPPQGKPRNNEVLEVQ 297 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 Y A+ I PG + + L+ G ++ + P E+++D+GW Sbjct: 298 KN--LYAARTIEAVGEIAPGAAARVDSHLWVGPQDQKAMAALA-----PGLELVVDYGWL 350 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 IAKP+F LM++ ++++GN+G I+ TV +K LF+PLA Y S A MK + P++ L Sbjct: 351 TIIAKPLFTLMTWLHSILGNWGWTIVALTVLIKALFYPLAAASYRSMARMKQVAPRLQAL 410 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +EK+ Q L AM+++Y+T INPL GC P+++QIPVF ++Y V+ S+EMR AP+ Sbjct: 411 KEKYGDDK-QKLNAAMMEMYRTEKINPLGGCLPMVVQIPVFISLYWVLLASVEMRGAPWI 469 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 W+ DL+ DP I P IM +MF+Q+K++P P D QA + Sbjct: 470 LWVHDLSIRDPYF-------------------ILPAIMMATMFLQIKLNPTPPDPVQAKV 510 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + MP+VF + FPAGL++YW +N +SI QQ I + + Sbjct: 511 MMIMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWSITRAMQRKTEAAAN 560 >gi|238921764|ref|YP_002935279.1| inner membrane protein translocase component YidC [Edwardsiella ictaluri 93-146] gi|259515692|sp|C5BF61|OXAA_EDWI9 RecName: Full=Inner membrane protein oxaA gi|238871333|gb|ACR71044.1| inner membrane protein OxaA [Edwardsiella ictaluri 93-146] Length = 541 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 142/571 (24%), Positives = 250/571 (43%), Gaps = 56/571 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N F+ +AL + WQ + + + + V S Sbjct: 1 MDSQRNLFL-VALLFVSFLIWQAWQTDHNPQPVAQTAGQSISDTASQAVPESG------- 52 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L +IN +G + +L Y + S++P L + + Y Sbjct: 53 ------QGKLITVKTDVLALTINTRGGDIEQADLLAYPATLGSDTPFQLL--ETTPQFVY 104 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ + N + I L + AN +++ +T L Sbjct: 105 QAQSGLTGKSGPDNPANGARPLYSANQTSYEMLPGQDELRIPLTYTAANGVIYTKTFVLK 164 Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 + + V N+S D + + G++ + T +N F + A Sbjct: 165 RNDYAIAVDYKVKNDSHDALDLTLFGQLKQSVDLPKHRDTGSNNFALHTFRGAAYSSSDD 224 Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 QKY + N W+ + +Y+A+ +IP + F + G+ + Sbjct: 225 KYQKYSFSDIEDKNLNVQTKGGWVAMLQQYFATAWIPHDSG--VNTFYSANLGNGQAAIG 282 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + A +++ P + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 283 YKAPSVSVAPNTEKVLSTTLWVGPELQSDMAAVA-----PHLDLTVDYGWLWFISQPLFK 337 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ ++ VGN+G AI++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 338 LLQLIHSFVGNWGFAIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK- 396 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M+ LYKT +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DLAA Sbjct: 397 QRMSQEMMALYKTEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLAAP 456 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 457 DPFY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIF 497 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 498 TVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 528 >gi|224367782|ref|YP_002601945.1| OxaA [Desulfobacterium autotrophicum HRM2] gi|223690498|gb|ACN13781.1| OxaA [Desulfobacterium autotrophicum HRM2] Length = 557 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 155/574 (27%), Positives = 268/574 (46%), Gaps = 32/574 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFY-------VYPRIEEMNNERKNIQTVKQPNQVDNSY 53 M+ F AI LS++++ W F+ P ++NE+ D + Sbjct: 1 MDDQKRLFTAIILSIVVIVGWNFFFVDSKPVPEKPDQAIVSNEQPMAGKGDIAPITDPAP 60 Query: 54 AAVLIDDRAQALSMS------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + D AQ + + +++ N +I+ GA+ + L L Y +SP+ Sbjct: 61 SQQTEIDAAQPPATAIPTRNARTIQVSNQFYNIAISETGAKVNSLTLNAYRETSEKDSPL 120 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 ++SP+ T + LD S +E + + + +A ++ Sbjct: 121 KEMVSPNLTGGLFGVSLDGKSIPG-LETALFTAQTPSDQLNLDQGKKSLTFTWTSAQGVV 179 Query: 168 FERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 E+ + + YL + N+S ++ S I + + F Sbjct: 180 VEKIFTFSADSYLIGFDLVLKNSSGMPMKDSFMVEI-----PGIIDEKNARFSFEGPTTL 234 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + ++ + + + W G +D+Y+ S IP T + + S Sbjct: 235 INDKLEEIKAKKIAEKDTYEGQIQWAGYTDRYFMSCLIPQAPTEAKVKLSFDS---PVVT 291 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 ++ + + PGK +T + LF G K + Y + + I++GWF +AKP Sbjct: 292 TRYVQSMERLDPGKQVTYSFSLFMGPKSLKLLSSYGNN-----LKKAINFGWFDILAKPC 346 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 M M+ + L+ N+GIAIML T+ +KL+F+PL K Y S +MK +QP + E+REK+K Sbjct: 347 LMGMNLIHGLIPNYGIAIMLLTLLIKLIFWPLGTKSYRSMNDMKKLQPLMMEMREKYKGD 406 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + + ++ LYKT+ +NP++GC P+++Q+P+FFA+Y+++ ++E+RHAPF WI DL+ Sbjct: 407 K-QRMNQEVMGLYKTYKVNPMSGCLPMIVQMPIFFALYRMLYQAIELRHAPFMWWINDLS 465 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 A D F +PF + + + IIM +MF+Q KMSP D QA ++ MP+ Sbjct: 466 APDRLFHFD--FAIPFMQAPY-GIPVLTIIMGATMFLQQKMSPSTGDPTQAKMMMLMPLF 522 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 F +FPAGL++YW +NV+SI QQ I K Sbjct: 523 MTFIFINFPAGLVLYWLVNNVLSIGQQYYIQKKF 556 >gi|294138798|ref|YP_003554776.1| inner membrane protein oxaA [Shewanella violacea DSS12] gi|293325267|dbj|BAI99997.1| inner membrane protein oxaA [Shewanella violacea DSS12] Length = 544 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 140/565 (24%), Positives = 237/565 (41%), Gaps = 38/565 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N F+ I L + WQ + + + E ++ T +S Sbjct: 1 MESQRNIFL-IGLLFVSFLLWQQWQTDQAPQPVTTELTSVSTASNTTDAHSSDVPDADSA 59 Query: 61 -RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A ++ + + L+ IN G L + L+ S+ P V L + Sbjct: 60 LPAATVASKELITIHTDQLVIKINPVGGDIVYSALVEHKLEQESDEPFVLLEQTKDIN-- 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL-----VFKNANNILFERTISL 174 Y A+ + ++ S L + I Sbjct: 118 YIAQSGLIGRNGIDSSVKGRAHFDSASQDYTMAADQETLEVPLTYVAENGAKYTKMFIFH 177 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 + + V N + ++ G+I +++++ A E+ Sbjct: 178 RGQFKIDVDYLVDNTTDKPLQVQMYGQIKHSIKKSSSSMIMPTYLGAAFSTSDIRYEKYK 237 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D + W + Y+ S +IP + + G A F Sbjct: 238 FDDMADKDLDKKTLGGWAAMLQHYFVSAWIPPENDQNTIFSSISAGGQAN--IGFRGAIY 295 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I PG + T ++ + G K+ + +++D+G+ +++A P+ L+ +F Sbjct: 296 DIAPGATQTISSQFYVGPKDQEALSEISDS-----LNLVVDYGFLWWLAVPINKLLMFFQ 350 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++V N+G+AI+L T+ V+ + FPL K QY S A M+N+QPK+ E++E+F Q + +A Sbjct: 351 SIVSNWGLAIILITLTVRGMLFPLTKAQYTSMAKMRNLQPKLAEMKERFGD-DRQKMGQA 409 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NP+ GC PILLQ+P+F ++Y V+ S+E+RHAPF WI DL+ DP Sbjct: 410 MMELYKKEKVNPMGGCLPILLQMPIFISLYWVLMESVELRHAPFMLWITDLSVQDPYY-- 467 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALS 532 + PI+M +SMF+ KM P P D Q ++ WMPVVF Sbjct: 468 -----------------VMPILMGISMFVMQKMQPMAPTMDPMQQKMMQWMPVVFTVFFL 510 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 511 WFPAGLVLYWLVGNLVAITQQKIIY 535 >gi|149375641|ref|ZP_01893410.1| Preprotein translocase subunit YidC [Marinobacter algicola DG893] gi|149360043|gb|EDM48498.1| Preprotein translocase subunit YidC [Marinobacter algicola DG893] Length = 570 Score = 341 bits (875), Expect = 2e-91, Method: Composition-based stats. Identities = 141/596 (23%), Positives = 250/596 (41%), Gaps = 63/596 (10%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ---------- 48 M+ A +S ++V AW Y P+ + + + Sbjct: 1 MDIQRIVLFAGLAIVSYMMVLAWNEDYHQPQTQPATEQASTTTQPASTDDMTLPGESATG 60 Query: 49 ----------VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 + + + + + + ++ I+ G + +L + Sbjct: 61 PDTSSEEFTTPEGDGQTLSASETSSVSASDQLITVRTDVYELKIDRVGGNLIESSLLQHD 120 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-----NIELPNSNTVWNLISGKILTPT 153 + S + L + +K Y E + N P N + + T Sbjct: 121 RSLDSEESLRLLTN--TSKRTYIMESGLIGRDGIDSKRNGNAPVYNASASEYELQEGENT 178 Query: 154 TPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212 + L F NN+ + + Y + + N S + + G+I+R + T Sbjct: 179 LTVDLTFTTDNNVEVTKQYLFSRDSYEIDVRYQINNQSDSVWQANMTGKIVRDQAPDPTA 238 Query: 213 T----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 G + + + + D+ ++ I+ +N WL Y+ + ++P ++ Sbjct: 239 QNSLGIRAFLGMVVSSPEDPYEKFDFDDLSENPINQ-SVTNGWLAFLQHYFLAAWVPERD 297 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 Q Y F + PG++ + + G K + + P Sbjct: 298 QPAQFQSTRR---GPLYVMGFVYPATVVEPGQTSEVSAKAYVGPKIIERLENVA-----P 349 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + +D+G+ +FIA P+F+++ +F+ LVGN+G+AI+L TV VK +FF L+ Y S A Sbjct: 350 NLDRTVDFGFLFFIALPLFIILDWFHGLVGNWGVAIILLTVLVKAVFFKLSATSYRSMAR 409 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ + P++ L+E + Q + + M+ LYK INPL GC PIL+Q+PVF ++Y V+ Sbjct: 410 MRAVAPQLTRLKELYGD-DRQRMSQEMMALYKREKINPLGGCLPILVQMPVFISLYWVLF 468 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S+++RHAPF WI+DL+ DP I PI+M SM +QM ++ Sbjct: 469 ESVQLRHAPFMLWIQDLSVMDPYF-------------------ILPILMGASMMLQMSLN 509 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P P D QA I+ MP++F FPAGL++YW +N++SI QQ I + AE+ Sbjct: 510 PTPPDPMQAKIMKLMPLIFTVFFLWFPAGLVLYWLVNNILSISQQWYITRKIEAEV 565 >gi|330505869|ref|YP_004382738.1| putative inner membrane protein translocase component YidC [Pseudomonas mendocina NK-01] gi|328920155|gb|AEB60986.1| putative inner membrane protein translocase component YidC [Pseudomonas mendocina NK-01] Length = 592 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 139/614 (22%), Positives = 234/614 (38%), Gaps = 81/614 (13%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + + +S ++V W Y + + + Sbjct: 1 MDIQRSILIVALAVVSYLMVLQWNEDYGQAALPAEVSTSTAATPALPDTPAATASTGSDD 60 Query: 59 DDRAQA-----------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 A A + + +K L +I+ +G L L Y Sbjct: 61 IPTAVAEPTAAAVAPTAATSDELIRVKTDVLELAIDPRGGDIVQLRLPQYPRRQDRPDVP 120 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV---FKNAN 164 L + + Y A+ + N + + +W+ LV + N Sbjct: 121 FQLF-DNGNERTYLAQSGLIGQ-NAPDKSSGRALWSSEKQSYEMAEGQDSLVVDLTYSEN 178 Query: 165 NILFERTISLDE----------------------HYLFKIVDTVTNNSIDQIRFSPRGRI 202 + + + S Y + + N S + ++ Sbjct: 179 GVSYIKRYSFKRGLNPECSAREQELKKPGCIDPSAYQVDVRYLIDNQSDQAWSGNLFAQL 238 Query: 203 MRHKPQT----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN--------- 249 R G D+ + DI+K Sbjct: 239 KRDNSGDPSSTTATGTATYLGAAVWTADEPYKKISIKDIDKQDEKRRQGDANAWFKENVQ 298 Query: 250 -SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL 308 W+ Y+ + ++P + + D Y F+ + + G T L Sbjct: 299 GGWVAWLQHYFVTAWVP--NKDNTNLIQTRKDSQGNYIVGFTGPSVQVAAGGKGETGAIL 356 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 +AG K + P E+ +D+G+ +F+A+P+F L+ + ++GN+G +I++ T Sbjct: 357 YAGPKLQEHLSTLS-----PGLELTVDYGFLWFLAQPIFWLLQVIHGVLGNWGWSIIVLT 411 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KL+FFPL+ Y S A M+ + PK+ L+E+ Q + +AM++LYK INPL Sbjct: 412 IIIKLIFFPLSAASYRSMARMRAVSPKLQALKEQHGD-DRQKMSQAMMELYKKEKINPLG 470 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC PIL+Q+PVF A+Y V+ S+EMR AP+ WI DL+ DP Sbjct: 471 GCLPILVQMPVFLALYWVLLESVEMRQAPWLLWITDLSIKDPFF---------------- 514 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I PIIM +MFIQ +++P P D QA +L MP++F F FPAGL++YW +N + Sbjct: 515 ---ILPIIMGATMFIQQQLNPTPPDPMQARVLKLMPIIFTFFFLWFPAGLVLYWVVNNCL 571 Query: 549 SIVQQAVIMKMHGA 562 SI QQ I + A Sbjct: 572 SIAQQWYITRRIEA 585 >gi|308273509|emb|CBX30111.1| hypothetical protein N47_D29200 [uncultured Desulfobacterium sp.] Length = 551 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 147/565 (26%), Positives = 256/565 (45%), Gaps = 20/565 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME+ + +A+ALS I+ W FY + + E +NI + P N Sbjct: 1 MEQAR-FIIAVALSFIVFLGWDYFYNDKKPAKQITEVQNIDKRQSPVDNKNINPPEKSSQ 59 Query: 61 RAQALSMSPR----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + + E+ P IN K A L+ Y+ + +SP L+ Sbjct: 60 SDDTVFQENKPLRVFEINTPLYSVKINEKNAAITSFKLKKYNETIDVDSPKKELIPKDLN 119 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD- 175 D S + + + + IK +K+ ++ E+ Sbjct: 120 TGTVIVGFDEKSVHGIENATYTADSNAAANLVLDQGSKEIKFYWKSPEGVIIEKKYKFSA 179 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + YL + V N S I+ I + + + + + Sbjct: 180 DTYLIGLKLNVLNQSSQSIKDRLFVSIESYNMSNKSTNSFEGPSALINGSLEQIK----- 234 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +++ + W+ I D+Y+ S IP + + + ++ +++ E Sbjct: 235 LKNIEEKNSYPGNIKWVAIQDRYFMSAIIPVTPVEANMRLYMKAKDKGYFEEQYTLPEKE 294 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I PG+ L+ G K + D +++GWF F+AKP+ M++ Y+ Sbjct: 295 IRPGEQEEKEFKLYFGPKSLKLLGSLGYD-----LNKAVNFGWFDFLAKPVLYAMNFLYS 349 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 + N+G+ I+L T+F K++F+PL K Y S MK IQP + EL+EK+ + + + + Sbjct: 350 FIPNYGVVIILLTIFFKIIFWPLGSKSYKSMNEMKKIQPLLAELKEKYGNDK-KRMNEEL 408 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LYKT+ INP+ GC P++ Q+PVFFA Y+++ ++E+RHAPF WIKDL+A D F Sbjct: 409 MGLYKTYKINPMGGCLPMVAQLPVFFAFYRMLYETIELRHAPFVFWIKDLSAPDRLFHFA 468 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 +PF P + + + I+M +MFIQ KM+P D QA ++ ++P+VF +F Sbjct: 469 --FTIPFMEPPY-GIPVLTIVMGATMFIQQKMAPAVGDPAQAKMMMFLPLVFTVIFINFS 525 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMH 560 AGL++YW +NV+SI+QQ +I + + Sbjct: 526 AGLVLYWLVNNVLSILQQNIISRKN 550 >gi|119503568|ref|ZP_01625651.1| putative inner membrane protein translocase component YidC [marine gamma proteobacterium HTCC2080] gi|119460630|gb|EAW41722.1| putative inner membrane protein translocase component YidC [marine gamma proteobacterium HTCC2080] Length = 571 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 141/594 (23%), Positives = 253/594 (42%), Gaps = 66/594 (11%) Query: 1 MERNWNYFVAIA--LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA---- 54 M+ +A A LS +++ W F + + + P Sbjct: 1 MDIQRYLLIAAAAVLSFMLLTEWNVFKDQRVAATQDTSPRIANSFSSPAASPQEQPTGIA 60 Query: 55 ----------------------AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 A + + + +KN L ++L+G + Sbjct: 61 NRSDIYDTAANSDDVPTILPALAPQTNTPLASSEPKNIIVIKNDVLEFVVDLRGGDIIET 120 Query: 93 NLRGYHLDV-SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151 +L Y + ++P+V L +++ Y + V + + Sbjct: 121 SLTKYPERIEDPDTPLVLL--ERSSERTYIMQSGLVGPDGIDTNGRAIYDAAKNRYDATS 178 Query: 152 PTTPIKLVFKNANNIL-FERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209 + I L ++ + E+ ++ + Y ++ + NN + + P ++ R Sbjct: 179 GSKTIVLSARDTPPGVAVEKHFTVAPNTYTIEVSYHIVNNGTEIWQSIPFAQLKRDSSPA 238 Query: 210 ATNT-----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 + G + + ++DI ++ W+ + Y+ + + Sbjct: 239 PSADTSGFGMQPFLGAATTTPENRYEKFTFADIADDPWK-TQQTGGWIAMLQHYFTAALV 297 Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 P E + + DG A F++ + I PG++ + +AG K+ T+ Sbjct: 298 PDAEATHTYSTRRTRDGFN--IAGFTSEPLRIAPGQTGSWNTQFYAGPKDQYTLAELA-- 353 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 P E+++D+GW ++I KP+F L++ ++V N+G+AI+L T+ +K FF L+ Y Sbjct: 354 ---PHLELVVDYGWLWWIGKPLFWLLTQIQSVVINWGVAIILLTLLIKTAFFKLSAASYR 410 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A M+ QPK+ ++E+ Q +AM++LYK INP+ GC PIL+Q+PVF A+Y Sbjct: 411 SMAKMRKAQPKMVAIKEQHANDK-QKQSQAMMELYKKEKINPMGGCLPILVQMPVFIALY 469 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 V+ S+E+R APF WIKDLA DP + P++M SMF Sbjct: 470 WVLMESVELRQAPFALWIKDLAVMDPYF-------------------VLPLMMGASMFFM 510 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 K++PPP D QA ++ W+PVVF F FPAGL++YW +N++S+ QQ I + Sbjct: 511 QKLNPPPPDPMQAKLMQWLPVVFTFFFLWFPAGLVLYWVVNNLLSMAQQYYITR 564 >gi|328471231|gb|EGF42133.1| membrane protein insertase [Vibrio parahaemolyticus 10329] Length = 540 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 140/570 (24%), Positives = 245/570 (42%), Gaps = 42/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V E+ + + V Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQAVEQAQSSSTLPAPSFADELDPVPGQQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +A A + + L SI+ G +L Y ++ S+ P V L + + Sbjct: 60 QASA----KTITVTTDVLTLSIDTVGGDVVHADLNQYSAELDSSDPFVLL--KDTQGHQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V ++ +N+ + + + F + + Sbjct: 114 IAQSGLVGPQGIDLSSSNRPHYNVSADSFTLADGQDELRVPMTFTANGIEYTKTYVLKRG 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y + V NNS + F + ++ + T G D + + Sbjct: 174 SYALNVEYDVANNSGNNATFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYSFE 233 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S W + Y+A+ +IP E + + + + Sbjct: 234 DMQDRNLSINLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMPNK 290 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ L+++ Sbjct: 291 TIATGDQAKFEATLWVGPKLQQEMAAVA-----PNLDLVVDYGWLWFIAKPLHSLLAFIQ 345 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 405 MMELYKKEKVNPLGGCLPLVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 535 >gi|262377655|ref|ZP_06070875.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter lwoffii SH145] gi|262307414|gb|EEY88557.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter lwoffii SH145] Length = 587 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 141/586 (24%), Positives = 242/586 (41%), Gaps = 64/586 (10%) Query: 11 IALSVIIVYAWQNFYVYPRIEEMNNER----------KNIQTVKQPNQVDNSYAAVLIDD 60 ++ +++ AWQ Y + N QT + + + Sbjct: 14 FVVAYLLILAWQKDYGNAETKPQQETAVVSHDVSADLPNGQTATVASDLPQANVPAQQAT 73 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A A + ++ IN KG + L + + S+ P V L S+ K Y Sbjct: 74 DATAPVSQQLISVQTDLYHLWINPKGGDIVRIELLNHDKNKDSDEPFVML--ESDAKRTY 131 Query: 121 FAELDYVSTANNIELPNSNTVWN--------------LISGKILTPTTPIKLVFKNANNI 166 A+ + N ++ + LVFK A+ I Sbjct: 132 VAQSGLIGLNGPDSSRNGRPMYELEKTAYTLADAKTVKSKDGENLKVLSVPLVFKTADGI 191 Query: 167 LFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFI 221 +T + + Y + V N S + G+I R + F + Sbjct: 192 EIIKTFNFTEGEYPVVVNHKVVNRSGQTWQGQMFGQIKRDNSEDPGKSDQGIFTLGTFLG 251 Query: 222 AVLGDKSLVEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSK-------ETSFHS 273 G K D + + W+ + Y+ S ++P + ++ + Sbjct: 252 GAWGTPDEQYNKLKFDNFVEEKVSTEATGGWVAMVQHYFVSAWVPGQLKLTQGNGEAYSA 311 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + + F++ + G ++G K + Sbjct: 312 KLESRKSTDNMNIIGFTSPTFNVPAGTVAEIDATFYSGPKIQSELKDLAA-----GLNQT 366 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+GW + IAK +F+ + +F+ LVGN+G AI+L T+ VKL+ +PL+ K Y S A M+ I Sbjct: 367 VDYGWLWPIAKLLFVGLEFFHGLVGNWGWAIILLTILVKLILWPLSSKSYRSMAKMRVIA 426 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ ++E+F + M+ LYK +NPLAGC P+LLQ+P+F A+Y V+ S+E+ Sbjct: 427 PEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLAGCLPLLLQMPIFLALYWVLMESVEL 485 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 RHAP+ WI+DL++ DP I P++M L+M+IQ ++P P D Sbjct: 486 RHAPWMLWIQDLSSMDPWF-------------------ILPLLMGLTMYIQQSLNPQPTD 526 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 QA + +MP++F L FPAGL++YW +N+I+I+QQ +I K Sbjct: 527 PMQAKVFKFMPIIFTVFLLFFPAGLVLYWIVNNLITILQQTLINKS 572 >gi|260771041|ref|ZP_05879969.1| OxaI/YidC membrane insertion protein [Vibrio furnissii CIP 102972] gi|260613930|gb|EEX39121.1| OxaI/YidC membrane insertion protein [Vibrio furnissii CIP 102972] gi|315178632|gb|ADT85546.1| hypothetical inner membrane protein translocase component YidC [Vibrio furnissii NCTC 11218] Length = 540 Score = 341 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 137/570 (24%), Positives = 246/570 (43%), Gaps = 42/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V E+ + + + + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQAVEQAQTSSAVPAPSLADEFDPAPSQN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A A + + L SI+ G L Y ++ S +P V L + + + Sbjct: 60 SAAA----KVITVTTDVLTLSIDTVGGDVVTAKLNQYSDELDSENPFVLLKNTQG--HQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ + N+ + + + I + ++ + + Sbjct: 114 IAQSGLIGPQGIDLSSNNRPTYTVDADSFTLADGQDELRIPMTYQANGLEYTKTFVLKRG 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 +Y + V N+S + + ++ + + G D + + Sbjct: 174 NYAVDVEFNVVNHSGNNATLGMYAHLRQNLLDSGGSLAMPTYRGGAYSTEDTRYKKYSFD 233 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ +++ + W + Y+AS +IP E + + + + Sbjct: 234 DMQDRNLAMNLANGQGWAAMIQHYFASAWIPRNEPGTNLYSRVIGNLGD---IGVRMPNK 290 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G+ L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 291 TIADGQQADFKATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQ 345 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYKT +NPL GC PI LQ+P+F ++Y + S+E+RH+PF+GWI DL+A DP Sbjct: 405 MMELYKTEKVNPLGGCLPIFLQMPIFISLYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF KMSP D Q I+ +MPV+F F Sbjct: 463 -----------------ILPLLMGASMFFIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKGLEKK 535 >gi|114565213|ref|YP_752727.1| 60 kDa inner membrane insertion protein [Shewanella frigidimarina NCIMB 400] gi|122298224|sp|Q07VS6|OXAA_SHEFN RecName: Full=Inner membrane protein oxaA gi|114336506|gb|ABI73888.1| protein translocase subunit yidC [Shewanella frigidimarina NCIMB 400] Length = 542 Score = 341 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 137/564 (24%), Positives = 236/564 (41%), Gaps = 38/564 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + QT + A + Sbjct: 1 MESQRN-ILLIGLLFVSFLMWQQWQTDKAPKPATA-QTVTQTNAASQHSADVPEADISGV 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + +K L I+ G L + ++ S+ P V L +N Y Sbjct: 59 PVELPANKNLISVKTDQLDIKISPIGGDIVYAALVEHKREIDSSDPFVILEQKNN--FTY 116 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL-----VFKNANNILFERTISLD 175 A+ + N +++ + L + + Sbjct: 117 IAQSGLIGRDGIDSSANGRAAYSVQTNSYSLADGKDTLTVPFTYTADNGVTYVKSFTFTR 176 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + +++N S ++ G+I + ++ ++ A + E+ Sbjct: 177 GQYDVGVDYSISNTSAAPLQVQMYGQIKQTIKESESSMMMPTYRGGAFSAQDTRYEKYNF 236 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D W + Y+ S ++P S + G A F Sbjct: 237 DDMADKNLAKVTLGGWAAMLQHYFVSAWVPPATDSNTIFSSMSAGGMAN--IGFRGAVYD 294 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I PG + + + G K + + +++D+G+ +++A P+ L+ ++ + Sbjct: 295 IAPGATQEINSQFYVGPKNQKELSAISET-----LNLVVDYGFLWWLAIPIHWLLMFYQS 349 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L T+ V+ +PL KKQY S A M+N+QPK+ E++E+F Q + +AM Sbjct: 350 FVGNWGVAIILITLTVRGGLYPLTKKQYTSMAKMRNLQPKLTEMKERFGD-DRQKMGQAM 408 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 409 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESYELRHAPFMLWITDLSVQDPYY--- 465 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533 + P++M LSMF+ KM P P D Q ++ WMPV+F Sbjct: 466 ----------------VLPLLMGLSMFLMQKMQPVAPTMDPMQVKMMQWMPVIFTVFFLW 509 Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 510 FPAGLVLYWLVGNLVAITQQKIIY 533 >gi|28896777|ref|NP_796382.1| putative inner membrane protein translocase component YidC [Vibrio parahaemolyticus RIMD 2210633] gi|153838490|ref|ZP_01991157.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ3810] gi|260361953|ref|ZP_05774958.1| inner membrane protein OxaA [Vibrio parahaemolyticus K5030] gi|260876536|ref|ZP_05888891.1| inner membrane protein OxaA [Vibrio parahaemolyticus AN-5034] gi|260897407|ref|ZP_05905903.1| inner membrane protein OxaA [Vibrio parahaemolyticus Peru-466] gi|260901105|ref|ZP_05909500.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ4037] gi|38502972|sp|Q87TR5|OXAA_VIBPA RecName: Full=Inner membrane protein oxaA gi|28804985|dbj|BAC58266.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus RIMD 2210633] gi|149748113|gb|EDM58972.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ3810] gi|308087936|gb|EFO37631.1| inner membrane protein OxaA [Vibrio parahaemolyticus Peru-466] gi|308090400|gb|EFO40095.1| inner membrane protein OxaA [Vibrio parahaemolyticus AN-5034] gi|308108175|gb|EFO45715.1| inner membrane protein OxaA [Vibrio parahaemolyticus AQ4037] gi|308114149|gb|EFO51689.1| inner membrane protein OxaA [Vibrio parahaemolyticus K5030] Length = 540 Score = 341 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 140/570 (24%), Positives = 245/570 (42%), Gaps = 42/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V E+ + + V Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPAPQAVEQAQSSSSLPAPSFADELDPVPGQQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +A A + + L SI+ G +L Y ++ S+ P V L + + Sbjct: 60 QASA----KTITVTTDVLTLSIDTVGGDVVHADLNQYSAELDSSDPFVLL--KDTQGHQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V ++ +N+ + + + F + + Sbjct: 114 IAQSGLVGPQGIDLSSSNRPHYNVSADSFTLADGQDELRVPMTFTANGIEYTKTYVLKRG 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y + V NNS + F + ++ + T G D + + Sbjct: 174 SYALNVEYDVANNSGNNATFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYSFE 233 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S W + Y+A+ +IP E + + + + Sbjct: 234 DMQDRNLSINLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGD---IGVRMPNK 290 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G L+ G K + P ++++D+GW +FIAKP+ L+++ Sbjct: 291 TIATGDQAKFEATLWVGPKLQQEMAAVA-----PNLDLVVDYGWLWFIAKPLHSLLAFIQ 345 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 405 MMELYKKEKVNPLGGCLPLVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 535 >gi|293391845|ref|ZP_06636179.1| putative inner membrane protein translocase component YidC [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952379|gb|EFE02498.1| putative inner membrane protein translocase component YidC [Aggregatibacter actinomycetemcomitans D7S-1] Length = 536 Score = 341 bits (873), Expect = 3e-91, Method: Composition-based stats. Identities = 144/561 (25%), Positives = 246/561 (43%), Gaps = 38/561 (6%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 + +S I+ WQ Y P+ + V + V N+ A + Sbjct: 2 VIALLFMSFIVYQQWQLDYHTPKPVTTEQTAASASDVPASSNVGNAVIAT------DTQA 55 Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 + L+N IN G L Y ++ SN+P + L + ++ Y A+ Sbjct: 56 KGKIITLENDVFRLKINTLGGDVVSSELLKYDAELDSNTPFMLL--QNTPQHVYIAQSGL 113 Query: 127 VSTANNIELPNSNTVWNLISGKILTPTT---PIKLVFKNANNILFERTISLDEHYLFKIV 183 + L + LV+ + Y + Sbjct: 114 IGKNGIDTKSGRADYQADGDNFKLADGQNELSVPLVYVKDGVTYRKVFTLKRGEYNIAVN 173 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 + N S I P G++ +++ N A ++ ++ +++ Sbjct: 174 YEINNQSDKTIEVEPYGQLRHTLVESSGNVAMPTYTGGAYSSSETNYKKYSFSDMENANL 233 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + + W+ + Y+ S +IP+++ + +I P + T Sbjct: 234 SINTKAGWVAVLQHYFVSAWIPNQDADNQLYTLIDKAN-NIGSIGYRGPVTSIQPNTTET 292 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 T+ L+ G K + ++ +D+GW +FIAKP+F L+++ LV N+G+A Sbjct: 293 LTSKLWTGPKLQNEMAQVAN-----HLDLTVDYGWAWFIAKPLFRLLTFIQKLVHNWGVA 347 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++LYK Sbjct: 348 IICVTLVVKAILYPLTKAQYTSMAKMRMLQPKLQEMRERF-GEDRQRMSQEMMKLYKDEK 406 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC P+LLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 VNPLGGCLPLLLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----------- 455 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M SMF+ KMSP P AD Q ++ +MP++F+ FPAGL++YW Sbjct: 456 --------ILPILMGGSMFLLQKMSPTPVADPIQQKVMTFMPLIFMVFFLWFPAGLVLYW 507 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 SN+I+I+QQ +I + + Sbjct: 508 LVSNLITIIQQQLIYRGLEKK 528 >gi|254363130|ref|ZP_04979180.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica PHL213] gi|261491963|ref|ZP_05988540.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496234|ref|ZP_05992639.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153095021|gb|EDN75576.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica PHL213] gi|261308065|gb|EEY09363.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312430|gb|EEY13556.1| Oxa1 family cytochrome oxidase biogenesis protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 541 Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats. Identities = 135/568 (23%), Positives = 251/568 (44%), Gaps = 40/568 (7%) Query: 2 ERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 N + +S++I WQ + E+ +++ + D A+ + Sbjct: 1 MNNRGLLLMGLFLVSILIFTQWQQDFDP----EIQAQKQAQVAAQTQQAGDLPSASNANN 56 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A +++ + +++ L +I+ G +L ++ ++ SN+P L + Sbjct: 57 PIADSITQGKTITVESDVLRLTIDTLGGDVIGSDLLKHNAELHSNTPFKLL--QQDGDKI 114 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTT---PIKLVFKNANNILFERTISLDE 176 Y A+ V L + L F+ + + Sbjct: 115 YVAQSGLVGKNGIDTNAGRPQYAVTADSFKLAEGQNEISVPLTFEKEGVVYTKTFTLKRG 174 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y + + NN+ I P G++ +++ N A ++ ++ Sbjct: 175 SYDVGVNFNIKNNTAQAIEVQPYGQLKHSIVESSGNLTMPTYTGGAYSSSETNYKKYSFQ 234 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + + + W+ + Y+ S ++P+++ + + + TI Sbjct: 235 DMEKANLSVDTKAGWIAVLQHYFVSAWVPNQDADNSLYSRTNNG---VATIGYRGPLTTI 291 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 P + L+ G+K+ + ++ +D+GW +FIAKP+F L++ + Sbjct: 292 APNSEANLNSKLWTGSKDQKEMGESAN-----HLDLTVDYGWAWFIAKPLFWLLTAIQKI 346 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 V N+G+AI+ T+ VK + +PL K QY S A M+ +QP+I E+RE+F Q + + M+ Sbjct: 347 VSNWGLAIIGVTIVVKTILYPLTKAQYTSMAKMRMLQPRITEMRERFGD-DRQRMSQEMM 405 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY+ +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 406 KLYREEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY---- 461 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 I P++M SMF+ KMSP P AD Q ++ +MPV+F FP Sbjct: 462 ---------------ILPLLMGGSMFLLQKMSPTPVADPVQQKVMTFMPVIFTVFFLWFP 506 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +GL++YW SN+I+I QQ +I + + Sbjct: 507 SGLVLYWLTSNLITIAQQWLIYRNLEKK 534 >gi|157144347|ref|YP_001451666.1| putative inner membrane protein translocase component YidC [Citrobacter koseri ATCC BAA-895] gi|166975859|sp|A8ACL7|OXAA_CITK8 RecName: Full=Inner membrane protein oxaA gi|157081552|gb|ABV11230.1| hypothetical protein CKO_00051 [Citrobacter koseri ATCC BAA-895] Length = 548 Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ S P L + + Y Sbjct: 51 GVPASGQGKLITVKTDVLDLTINTRGGDVEQALLPTYPKELGSKEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYSVDNDTFVLADGQNELHVPMTWTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGEYAVNVNYSVQNAGEKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N + W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSNGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|270158408|ref|ZP_06187065.1| inner membrane protein OxaA [Legionella longbeachae D-4968] gi|289166753|ref|YP_003456891.1| cytoplasmic insertase into membrane protein, Sec system [Legionella longbeachae NSW150] gi|269990433|gb|EEZ96687.1| inner membrane protein OxaA [Legionella longbeachae D-4968] gi|288859926|emb|CBJ13912.1| cytoplasmic insertase into membrane protein, Sec system [Legionella longbeachae NSW150] Length = 555 Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats. Identities = 144/579 (24%), Positives = 255/579 (44%), Gaps = 41/579 (7%) Query: 2 ERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 + +AL S+ + AWQ Y + + Q+ S A Sbjct: 1 MDIRRVILYMALALISLSLWNAWQIDYPTKPAPTDSAITNQQNSEPLLPQMAPSTAVATS 60 Query: 59 DDRAQ--ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 A S +P + +K L I+L+ L Y + + LL Sbjct: 61 ITPANDVKTSNAPIIHVKTDVLDIGIDLQQGDIVSSQLLAYPQSIEEKNKPFLLLQNQPN 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFERTISL 174 + + +V++ NI+ N N ++ + L KN + + ++ + Sbjct: 121 ERYIASSNLFVASGQNIQALNFNFTSPQQQYELDPNQKQLVVTLNGKNGDGLDVKKEFTF 180 Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA----VLGDKSL 229 Y+ + + N + +++R P+ ++ + G Sbjct: 181 TKGSYVIDVEYKIVNQGNGEWTGYMNTQLIRSSPKEDKSSVFHVGSYTGASYSEPGKHRY 240 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + +SD+ K+++ W+ + Y+ S +IP ++ + +++ Y Sbjct: 241 QKVSFSDMNKTNLD-VDSKGGWVAMQQHYFLSAWIPDVNSTNKFYTRAVNND---YTIGA 296 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + IT+ P + T + L+ G + T+ P ++ +D+G +F++ +F L Sbjct: 297 VSQPITLQPSQEKTLGSKLYVGPEITSTLKGIA-----PSLDLTVDYGILWFLSSLLFSL 351 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M N+VGN+G +I+L TV +KL F+ L+ Y S A M+ +QPK+ LRE++ + Sbjct: 352 MKIINNVVGNWGWSIVLVTVLIKLAFYRLSAASYKSMAGMRKLQPKLQALRERYGDDKAK 411 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WIKDL+ AD Sbjct: 412 -ISQATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFILWIKDLSDAD 470 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P + + P+IM +M IQ K++P P D QA ++ ++PV+F Sbjct: 471 PYH-------------------VLPLIMGATMLIQQKLNPAPPDPMQAKVMMFLPVLFTG 511 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 SFPAGL++YW +N +SI+QQ I + E Sbjct: 512 LFWSFPAGLVLYWIVNNTLSILQQWYITRKFSDEKPAKK 550 >gi|222112701|ref|YP_002554965.1| yidc translocase/secretase [Acidovorax ebreus TPSY] gi|221732145|gb|ACM34965.1| YidC translocase/secretase [Acidovorax ebreus TPSY] Length = 569 Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats. Identities = 136/592 (22%), Positives = 231/592 (39%), Gaps = 55/592 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNERK--------NIQT 42 M + + +V W F+ P + + ++ Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQIHNGNKATFFPTPPAQTASTPAVAASGAGAADVPV 60 Query: 43 VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + A RV + L S + +G L Y Sbjct: 61 AAASATPGAAPQPPAGASVPPAAIPRERVTVSTDVLRLSFDSEGGSLVHGELLQYPEMED 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV--- 159 P LL + Y A+ + P T ++ G +L Sbjct: 121 KTKPF--LLLDESASRVYVAQTGLIGNGAGGAFPTHKTPMAVVPGPRELQDGQNELTVRF 178 Query: 160 --FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFG 215 L + Y + V N + ++ R P ++ + Sbjct: 179 ESADMGGVKLVKTWTLKRGAYDVAVKHEVVNTGTAPVSPQLYLQLARDGNKPAGESSFYS 238 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 G K + ++ DIE + SN ++ + Y+A+ ++ + Sbjct: 239 TFTGPAVYTEAKKYHKVEFKDIENGKAEIDKSSSNGYVAMVQHYFATAWLLGDGVQRDNF 298 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 + + Y I PG+S LFAG + + P E++ Sbjct: 299 VRKVD--TNLYSVGMITPLGEIAPGQSKAVDARLFAGPQIETLLEKLA-----PGLELVK 351 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GW +AKP++ L+ + ++GN+G +I+ +K+ F+ L K Y S A MK I P Sbjct: 352 DYGWLTILAKPLYWLLDQLHKVLGNWGWSIVALVFLLKIAFYWLNAKAYASMAKMKAINP 411 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +I E+RE+ K PQ +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+EMR Sbjct: 412 RIMEMRERLKD-KPQQMQQEMMRIYREEKVNPMGGCLPIMIQIPVFIALYWVLLSSVEMR 470 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 +AP+ GWIKDL++ DP I P++M+LS +Q ++P P D Sbjct: 471 NAPWIGWIKDLSSPDPFF-------------------ILPLLMTLSSLLQTALNPAPPDP 511 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 QA ++ MP++F FPAGL++YW +N++SI QQ +I G Sbjct: 512 MQAKMMWLMPLMFSVMFFFFPAGLVLYWLTNNILSIAQQWIINTRMGVPPQF 563 >gi|190570482|ref|YP_001974840.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019241|ref|ZP_03335048.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190356754|emb|CAQ54113.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995350|gb|EEB55991.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 569 Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats. Identities = 216/563 (38%), Positives = 333/563 (59%), Gaps = 18/563 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N +A LS++I+ W Y + + +I+ ++ N A ++ + Sbjct: 1 MSEAKNLILATILSILIIVLWHIIYDNF--LNTSQSQPSIENIEHIESS-NDLAPMIYQN 57 Query: 61 RAQALSM--SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R++ ++ RV L N L GSI+LKGA+FDDL L YHL+ SS+SP V LLSP+ +K+ Sbjct: 58 RSEIINSTREQRVNLTNNMLEGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESKD 117 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YFAE ++ I++P+S TVW + L + N N ILF ISLD++Y Sbjct: 118 VYFAEFGWLDPNEKIKVPDSKTVWQADKLN----QKEVNLFWDNENGILFRMKISLDDNY 173 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +FK+ + NN+ D + P G+I R + + + EG + + L E Y DI Sbjct: 174 MFKVEQIIENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFNN-KLEEWTYKDIS 232 Query: 239 KSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITI 296 K + S SW G +DKYW + IP K + K+ + + ++Q F I Sbjct: 233 KKRLIKASTSEKSWFGFADKYWFTAIIPEKSDQINVSIKHTNVNNIDKFQVDFVKPYKHI 292 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 LPG S++T N+ FAGAK+ + Y+ L IP F+ +D+G YFI KP+F+L+ YF + Sbjct: 293 LPGASVSTLNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFV 352 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + NFG+AI+L T+ +KLL PL+ + Y+S +K++QP++ ++E +K + K I Sbjct: 353 LKNFGLAILLLTLVIKLLMLPLSNRSYISMFKVKSLQPELTRIKELYKNDSLK-QHKETI 411 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 L+K +N+NP++ +P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL+A+DPTNIFTL Sbjct: 412 ALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFYLWIKDLSASDPTNIFTL 471 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFALSS 533 FG+ + P + +GI PII +M IQ K+S D Q ++ ++P + VF SS Sbjct: 472 FGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFSS 529 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 FPAGL+IYW +SN+I++VQQ++I Sbjct: 530 FPAGLVIYWIFSNIITLVQQSLI 552 >gi|120613420|ref|YP_973098.1| protein translocase subunit yidC [Acidovorax citrulli AAC00-1] gi|120591884|gb|ABM35324.1| protein translocase subunit yidC [Acidovorax citrulli AAC00-1] Length = 565 Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats. Identities = 134/589 (22%), Positives = 238/589 (40%), Gaps = 53/589 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51 M + + +V W + + + P V Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQVHNGHKATFFPEPVPAQVASAPAGGGASAPGSVPT 60 Query: 52 SYAAVLIDDRAQALSMS--------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 AA + + RV + L + + +G L GY Sbjct: 61 PSAAPAAGTQQVPGGTAAAAPAAPRERVTVTTDVLRLTFDSEGGTLTHGELLGYPDMADK 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN- 162 + P L + + Y A+ + N + + + I + F++ Sbjct: 121 SRPFTLL--DDSAQRVYVAQTGLIG-GANYPTHKTPMTVVPGNRTLQDGQNDISIRFESP 177 Query: 163 --ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQE 218 L + Y + V N + +++R P ++ + Sbjct: 178 DLGGVKLVKTWTVKRGAYDIAVKHEVVNTGTTPVSPQLYMQLVRDGNKPPGESSFYSTFT 237 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKY 277 G + + ++ DIE S N ++ + Y+A+ ++ + + Sbjct: 238 GPAVYTEARKYHKVEFKDIESGKAEIDKSSTNGYVAMVQHYFATAWLLADGIQRDLFVRK 297 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + Y + I PG+S T LFAG + + P E++ D+G Sbjct: 298 VD--TNLYSVGMITSVGEIAPGQSKTLDARLFAGPQIETMLEKLS-----PGLELVKDYG 350 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +AKP++ L+ + ++ N+G +I+ + +K+ F+ L K Y S A MK I PKI Sbjct: 351 WLTILAKPLYWLLEQLHKILNNWGWSIVGLVLLLKIAFYWLNAKAYASMAKMKAINPKIM 410 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+RE+ K PQ +Q+ M+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+EMR+AP Sbjct: 411 EMRERLKD-KPQQMQQEMMRIYREEKVNPMGGCFPIMIQIPVFIALYWVLLSSVEMRNAP 469 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + GWI DL++ DP I P++M+ S +Q ++P P D QA Sbjct: 470 WIGWIHDLSSPDPFF-------------------ILPLLMTASSLLQTALNPAPPDPMQA 510 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 ++ +MP++F FPAGL++YW +N++SI QQ +I K G Sbjct: 511 KMMWFMPLIFSVMFFFFPAGLVLYWLTNNILSIAQQWIINKRMGVPPQF 559 >gi|86147168|ref|ZP_01065484.1| putative inner membrane protein translocase component YidC [Vibrio sp. MED222] gi|218708091|ref|YP_002415712.1| putative inner membrane protein translocase component YidC [Vibrio splendidus LGP32] gi|254778171|sp|B7VGH7|OXAA_VIBSL RecName: Full=Inner membrane protein oxaA gi|85835052|gb|EAQ53194.1| putative inner membrane protein translocase component YidC [Vibrio sp. MED222] gi|218321110|emb|CAV17060.1| Inner membrane protein oxaA [Vibrio splendidus LGP32] Length = 539 Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats. Identities = 137/570 (24%), Positives = 242/570 (42%), Gaps = 43/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V E+ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWNVAQNPAPQAVEQAQSGSTLPAPSYADDLDPAPGQ- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ++ + + + L SI+ G NL Y + S V L + + + Sbjct: 59 ----VASAKTITVTTDVLTLSIDTVGGDVVTANLNDYSAEFDSEDTFVLL--KNEPGHQF 112 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V + + + + I + ++ + + Sbjct: 113 IAQSGLVGPQGIDLSSTNRPSYTVSADSFTLAEGQDELRIPMTYQANGLDYTKTFVLKRG 172 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y + V NNS + F + ++ + T G D + + Sbjct: 173 SYAIDVEYDVVNNSGNNATFGMYAHLRQNVMDDGGSLTMPTYRGGAYSTEDTRYKKYSFD 232 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S + W + Y+AS +IP E + + + + Sbjct: 233 DMQDRNLSLNLANGQGWAAMIQHYFASAWIPRDEAGSNLYTRVIGNLGD---IGVRMPNK 289 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G + L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 290 TIATGDEASFKATLWVGPKLQDQMAAVA-----PNLDLVVDYGWLWFIAKPLHTLLSFIQ 344 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +V N+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 345 GIVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGD-DRQRMSQE 403 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F ++Y + S+E+RH+PF+GWI DL+A DP Sbjct: 404 MMELYKKEKVNPLGGCLPILLQMPIFISLYWALMESVELRHSPFFGWITDLSAQDPYY-- 461 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 462 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 504 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + + Sbjct: 505 FPSGLVLYWLVSNIVTLIQQTLIYRALEKK 534 >gi|146313779|ref|YP_001178853.1| putative inner membrane protein translocase component YidC [Enterobacter sp. 638] gi|166975863|sp|A4WGH2|OXAA_ENT38 RecName: Full=Inner membrane protein oxaA gi|145320655|gb|ABP62802.1| protein translocase subunit yidC [Enterobacter sp. 638] Length = 548 Score = 340 bits (871), Expect = 4e-91, Method: Composition-based stats. Identities = 143/572 (25%), Positives = 254/572 (44%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQQQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A ++ +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKQITVKTDVLELTINTRGGDIEQALLLTYPKELKSNEPFQLL--ETTPEFLY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + I + + +A F +T +L Sbjct: 109 QAQSGLTGRDGPDNPANGARPLYNVDKDTFVMADGQNELAIPMTYTDAAGNTFTKTFTLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N S + S G++ + T ++ F + A Sbjct: 169 RGEYAVSVGYNVQNTSAKPLEVSTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDT 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ ++P+ + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSAKGGWVAMLQQYFATAWVPNNDGVNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ T + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGTLGSTLWVGPEIQNKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIAAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGITMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|119471654|ref|ZP_01614039.1| preprotein translocase [Alteromonadales bacterium TW-7] gi|119445433|gb|EAW26720.1| preprotein translocase [Alteromonadales bacterium TW-7] Length = 544 Score = 340 bits (871), Expect = 4e-91, Method: Composition-based stats. Identities = 139/570 (24%), Positives = 249/570 (43%), Gaps = 39/570 (6%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME F+ I L S ++ W N Y P+++ + + + S + Sbjct: 1 MESQR-TFLFIGLMLVSFLLFQEWNNDYNQPKVDPSATTQTQQANSTESDDFIPSSSESG 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + L+ +E+ I+ KG + +L Y +P + L Sbjct: 60 LPA-STTLAKRSVIEITTDVFKVKIDTKGGDIVESDLLQYEEVKGEETPFMLLGEFDG-- 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWN--LISGKILTPTTPIKLVFKNANNILFERTISL- 174 N YF++ + N ++ S + + L F ++N + F +T Sbjct: 117 NQYFSQSGLIGLNGPDASANGRPTYHSEQTSYTLTGDELRVPLQFTDSNGVSFTKTYVFK 176 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 Y + TV N + I+ ++ R + + G ++ + + Sbjct: 177 KGQYDVGLEYTVNNTTSAPIQVQLYTQVKRTVQEKGSLVDQNYLGAAYGTDEEPYEKYSF 236 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 SD+ +++ ++ Y+ S ++P ++ + L A + Sbjct: 237 SDMADKNLNE-STQGGYIAFIQHYFVSAWVPKQDQ--TNTLYSLITSSNAAIIGTKAEPV 293 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 + G T T+ + G KE + P ++ +D+GW +FI++P+F+L+ + Y Sbjct: 294 NVQAGSEQTITSIYYMGPKESDVLEALH-----PDLDLTVDYGWLWFISQPLFVLLKWLY 348 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +++GN+G+AI+ T+ VK L +PL K QY S A M+ +QPK+ L+EK+ Q +A Sbjct: 349 SILGNWGLAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMAALKEKYGD-DRQKFGQA 407 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +++YK +NP+ GC+PILLQ+P+F A++ V S E+RHA F W+ DL+A DP Sbjct: 408 TMEMYKKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFMLWLTDLSAQDPYY-- 465 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 + PI+ SMFI K+ P D Q ++ +MPV+F Sbjct: 466 -----------------VLPILFGASMFITQKLQPMTVTDPMQQKMMTFMPVIFSVFFLW 508 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+ISI Q I + + Sbjct: 509 FPSGLVLYWLVSNLISIAQMLYIYRGMEKK 538 >gi|188535565|ref|YP_001909362.1| putative inner membrane protein translocase component YidC [Erwinia tasmaniensis Et1/99] gi|254772784|sp|B2VCE6|OXAA_ERWT9 RecName: Full=Inner membrane protein oxaA gi|188030607|emb|CAO98502.1| Inner membrane protein OxaA [Erwinia tasmaniensis Et1/99] Length = 548 Score = 340 bits (871), Expect = 4e-91, Method: Composition-based stats. Identities = 142/574 (24%), Positives = 244/574 (42%), Gaps = 57/574 (9%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ + +S +I AWQ + Q Q S A + Sbjct: 1 MDSQRNLFLIAFLFVSFMIWQAWQTDNAPQPL------------QTQTTQNTTSAAGDAV 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + A + +K L +IN +G D L Y + S+ P LL S Sbjct: 49 NQGVPASGQGKTITVKTDVLSLNINTRGGDIDQAQLLTYPDKLGSDQPF--LLLESTPGF 106 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTIS 173 Y A+ N I L F N + + +T Sbjct: 107 LYQAQSGLTGRNGPDNPANGARPLYTSGQDHFELANGQGELRIPLTFTAENGVTYTKTFV 166 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227 L Y + + N + + S G++ + T ++ F + A Sbjct: 167 LKRGEYAIGVDYQINNTTQQPLEVSMFGQLKQTIDLPKHRDTGSSNFALHTFRGAAYSSS 226 Query: 228 S--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + K+ I + + +N W+ + +Y+A+ ++P S + G+ Sbjct: 227 ETNYEKYKFDTIRDNENLSTTTNNGWVAMLQQYFATAWVPQTAGSNT--LYTSNLGNGVA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + + G L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSAPVIVAAGSQQQLAATLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKFLHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 400 DK-QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMGSVELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 AA DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 AAQDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|119900278|ref|YP_935491.1| propable 60 Kd inner-membrane protein [Azoarcus sp. BH72] gi|119672691|emb|CAL96605.1| propable 60 Kd inner-membrane protein [Azoarcus sp. BH72] Length = 538 Score = 340 bits (871), Expect = 4e-91, Method: Composition-based stats. Identities = 145/566 (25%), Positives = 240/566 (42%), Gaps = 41/566 (7%) Query: 11 IALSVIIVYAWQNFY--VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS 68 + ++ +V W+ + P + E S A A S + Sbjct: 1 MVFTLSLVMLWEGWIKHNRPPVTETPTAAAPEAATGAVPTPSASLGGTPAVPAAAAASSA 60 Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 PRV++ L ++ +G L L + + LL ++ Y AE + Sbjct: 61 PRVKVVTDVLQAEVSAEGGSIVRLELEKHRATTDRSRGF--LLLDDGERHLYAAESGLIG 118 Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVT 187 T K ++L N + + ++ YL + + Sbjct: 119 TGLPTHRTRFALPAGDQVLKDGEDRLVLRLEAPEQNGVKVTKVMTFHRGSYLVDVNYEIA 178 Query: 188 NNSIDQIRFSPRGRIMRHKPQTATNT---FGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 N + ++ + R G + K+SDI++ Sbjct: 179 NGGAEPVKAHAYYQFTRDGKPAEQVEAFGVTTFTGPAYYTDAAKFQKVKFSDIDEGKAKF 238 Query: 245 FHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 ++ W+ + Y+ ++P + + G Y A + + PG + Sbjct: 239 AKTANDGWVAMVQHYFVGAWLPEAGVEREYFARKV--GGDLYSAGAIESVADVQPGATGN 296 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 L+ G +E + + P ++++D+GW IA P+F +S + L GN+G A Sbjct: 297 AQARLYVGPQEQDKLENIA-----PGLDLVVDYGWLTVIAAPLFWALSALHKLTGNWGWA 351 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L TV +K LFFPL+ Y S A M+ + P++ ++E + ++ Q+ M+ LY+T Sbjct: 352 IILVTVALKALFFPLSAASYKSMAKMRVLGPRLQRMKELYGNDKVKM-QQEMMNLYRTEK 410 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 INPL GC PIL+QIPVF A+Y V+ S+EMR AP+ GWI+DL+A DP Sbjct: 411 INPLGGCLPILVQIPVFIALYWVLLGSVEMRQAPWLGWIQDLSAKDPYF----------- 459 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 I PIIM +SM +QMK++P P D QA ++ MP+VF F FP+GL++YW Sbjct: 460 --------ILPIIMGVSMLVQMKLNPTPPDPIQAKVMMAMPIVFTFMFLWFPSGLVLYWV 511 Query: 544 WSNVISIVQQAVIMK-----MHGAEI 564 +NV+SI QQ I + GA+ Sbjct: 512 VNNVLSIAQQWQITRMIEGGKQGAKT 537 >gi|57239041|ref|YP_180177.1| putative inner membrane protein translocase component YidC [Ehrlichia ruminantium str. Welgevonden] gi|57161120|emb|CAH58031.1| putative integral membrane protein [Ehrlichia ruminantium str. Welgevonden] Length = 575 Score = 340 bits (870), Expect = 6e-91, Method: Composition-based stats. Identities = 211/585 (36%), Positives = 335/585 (57%), Gaps = 25/585 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N A+ LSV+I+ W+ Y E+ + ++ + + + Sbjct: 1 MLEIRNLVFAVVLSVLIMMGWRLVY-----EKFFTVQHVVEDEDSSSMIPEIDNVLTYRS 55 Query: 61 RAQALSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R + + + RV+L N + GSI+LKGAQ DDL + YH+ S+S + LLSP NT+ Sbjct: 56 RNEIIDSTQNLRVKLSNKEINGSISLKGAQLDDLVFKNYHITPDSSSDGIILLSPENTEG 115 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YF E ++ + I +PN + W +L+P + L + N ++F+ ++LD++Y Sbjct: 116 VYFIEFGWIDPQHKIVVPNQLSTWT-SDKSVLSPNNTVTLTWDNQQGVIFQIKVTLDDYY 174 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +FKI + NN+ + + P GRI R + T + + EG + G +L E Y +I Sbjct: 175 MFKIEQIIINNTDNVVNLIPYGRINRARHTTEKSYWISHEGAVGSFGY-TLKEWTYKNII 233 Query: 239 KSSISNFHE----SNSWLGISDKYWASVFIPSKETSFHSQFKYLS----DGHARYQAKFS 290 K + N W+GI+DKYW + IP+ ++ + R+Q FS Sbjct: 234 KERNIKISQQNTDDNQWVGIADKYWFTALIPNILQKKSKLSFHVKHGKYNNEDRFQVDFS 293 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + + P K+ ++T++LFAGAKE + Y+KDL I F+ +D+G YFI KP+F+L+ Sbjct: 294 HDSYSAYPNKTASSTSYLFAGAKELKLLDKYKKDLNISLFDKAVDFGILYFITKPVFLLL 353 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 YFY+L+GNFG+AI+L T+ +KL+ FPL+ K YVS +K +QP+I +++E +K ++ Sbjct: 354 EYFYDLIGNFGLAILLLTIVIKLIMFPLSYKSYVSMFKLKYLQPEILKIKELYKNDNTKM 413 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 K + L+K ++++P++G PIL+QIPVFFA+YKV+ +++EMRHAPF+ W+KDL+ D Sbjct: 414 -SKEVSLLFKKNDVSPMSGFIPILIQIPVFFALYKVLFVTIEMRHAPFYLWVKDLSNFDT 472 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-----ADKGQAMILNWMPV 525 N+ TLFG+L F P + +GI P+I+ ++M IQ KM+ DK QA + ++P Sbjct: 473 ANVLTLFGLLNFNPP--ICIGILPVILGITMIIQQKMNTSTHSSQDQDKIQASFIKFLPY 530 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 VF+F SSFP GLIIYW SN I+I+QQ +I G + L L Sbjct: 531 VFIFIFSSFPTGLIIYWICSNSITIIQQLIIKAYIGRKFNLKHDL 575 >gi|295095341|emb|CBK84431.1| protein translocase subunit yidC [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 547 Score = 340 bits (870), Expect = 6e-91, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 255/572 (44%), Gaps = 54/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A ++ +K L +IN +G + L Y ++ S P L + + Y Sbjct: 50 GVPASGQGKQITVKTDVLELTINTRGGDVEQALLLTYPKELKSTEPFQLL--ETTPEFIY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + I + + +A F +T +L Sbjct: 108 QAQSGLTGRDGPDNPANGARPLYNVENDTFVLADGQNELVIPMTYTDAAGNTFTKTFTLK 167 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 168 RGEYAVNVGYSVQNAGAKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDT 227 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ ++P+ + + + F + G+ Sbjct: 228 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWVPNNDGTNN--FYTANLGNGIAAI 285 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 286 GYKSQPVLVQPGQTGKLASTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 340 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 KLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 400 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 401 -QRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 459 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 460 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 500 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 532 >gi|261250645|ref|ZP_05943220.1| OxaI/YidC membrane insertion protein [Vibrio orientalis CIP 102891] gi|260939214|gb|EEX95201.1| OxaI/YidC membrane insertion protein [Vibrio orientalis CIP 102891] Length = 541 Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats. Identities = 140/570 (24%), Positives = 246/570 (43%), Gaps = 42/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V E+ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPTPQPVEQAQSSSTLPAPSFADELDPAP--- 56 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AQ + + + + L SI+ G + +L Y ++ S P V L + + + + Sbjct: 57 -AQQQASAKTITVTTDVLTLSIDTVGGDVINADLNQYSNELDSEDPFVLLKNEAG--HQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V + +++ + I + F + + Sbjct: 114 IAQSGLVGPQGIDLSSTNRPAYSVSADSFTLADGQDELRIPMTFTANGLEYTKTFVMKRG 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y + + N S + F + + + T G D + + Sbjct: 174 SYAIDVEYDIVNKSGNNATFGMYAHLRQSLLDAGGSITMPTYRGGAYSTEDTRYKKYSFD 233 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S + W + Y+AS +IP E + + + + Sbjct: 234 DMQDRNLSLNLANGQGWAAMIQHYFASAWIPRNEPGANLYTRVIGNLGD---IGVRMPNK 290 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G S L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 291 TIADGDSANFQATLWVGPKLQDQMAEVA-----PNLDLVVDYGWLWFIAKPLHTLLSFIQ 345 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 405 MMELYKKEKVNPLGGCLPLVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 535 >gi|255320707|ref|ZP_05361884.1| inner membrane protein [Acinetobacter radioresistens SK82] gi|262380663|ref|ZP_06073816.1| membrane protein insertase, YidC/Oxa1 family protein [Acinetobacter radioresistens SH164] gi|255302323|gb|EET81563.1| inner membrane protein [Acinetobacter radioresistens SK82] gi|262297611|gb|EEY85527.1| membrane protein insertase, YidC/Oxa1 family protein [Acinetobacter radioresistens SH164] Length = 584 Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats. Identities = 140/592 (23%), Positives = 238/592 (40%), Gaps = 64/592 (10%) Query: 11 IALSVIIVYAWQNFYVYPRIEEMNNER---------KNIQTVKQPNQVDNSYAAVLIDDR 61 ++ +++ AWQ Y + N Q + V + A Sbjct: 14 FVVAYLLILAWQKDYGHAETAPQQQAVVSHEVSADLPNSQAASASSDVPQANIATPQATD 73 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A + ++ IN KG + L + + S+ P V L S+ K Y Sbjct: 74 VTAPVNQQLISVQTDLYHLLINPKGGDIVRIELLNHDKNKDSDQPFVML--ESDAKRTYV 131 Query: 122 AELDYVSTANNIELPNSNTVW----------------NLISGKILTPTTPIKLVFKNANN 165 A+ + + V+ + +GK + T + Sbjct: 132 AQSGLIGLNGPDSNRSGRPVYEVEKTSYDLLKDAQTVSKDNGKAVKVLTIPMVYKTADGV 191 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFI 221 + + Y + V N S + G+I R + F + Sbjct: 192 EIIKTFTFKQGEYPIVVNHKVVNRSQQNWQGQMFGQIKRDNSEDPGKSDQGIFTLGTFLG 251 Query: 222 AVLGDKSLVEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSK-------ETSFHS 273 G K D N W+ + Y+ S +IP + + + Sbjct: 252 GAWGTPEEHYNKLKFDNFNDEKLNVDAKGGWIAVVQHYFVSAWIPGQLKLTQANGQPYAA 311 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + + F++ I + G ++G K + Sbjct: 312 KLESRKSADDMNIISFTSPTINVPAGTVAEVDATFYSGPKIQSELKDLAV-----GLNQT 366 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+GW + IAK +F+ + +F+N+VGN+G +I+L T+ VKL+ +PL+ K Y S A M+ I Sbjct: 367 VDYGWLWPIAKLLFLGLQFFHNIVGNWGWSIILLTILVKLILWPLSSKSYRSMAKMRVIA 426 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ ++E+F + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+ Sbjct: 427 PEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVEL 485 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 RHAP++GWI+DL+A DP I P++M L+MF Q ++P PAD Sbjct: 486 RHAPWFGWIQDLSAMDPWF-------------------ILPLVMGLTMFTQQSLNPQPAD 526 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 QA + MP++F + FPAGL++YW +N I+I+QQ I + E Sbjct: 527 PMQAKVFKIMPIIFTIFMLFFPAGLVLYWIVNNSITILQQWFINRSVKKERE 578 >gi|117918465|ref|YP_867657.1| protein translocase subunit yidC [Shewanella sp. ANA-3] gi|166977418|sp|A0KR32|OXAA_SHESA RecName: Full=Inner membrane protein oxaA gi|117610797|gb|ABK46251.1| 60 kDa inner membrane insertion protein [Shewanella sp. ANA-3] Length = 541 Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats. Identities = 140/564 (24%), Positives = 235/564 (41%), Gaps = 39/564 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + + D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANATTNHSADVPEADTSVPA 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L IN G L + L+ + P V L + Y Sbjct: 60 ALTATQN--LITVKTDQLDVQINPVGGDIVFAALVSHKLEQGKDQPFVLLEQTKD--FTY 115 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175 A+ + + + T + L + N + + + Sbjct: 116 IAQSGLIGRDGIDSSAKGRAAFAANKTEFTLADGQDTLEVPLTYVADNGVTYTKVFVFHR 175 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + I + N S ++ G+I + + ++ A E+ Sbjct: 176 GKFNVDIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMPTYRGAAFSTQDVRYEKYKF 235 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 + S N W + Y+ S +IP S + G A F Sbjct: 236 EDMSKSNLNQPTLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGGLAN--IGFRGAVYD 293 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I PG + ++ + G K+ + +++D+G+ +++A P+ L+ ++ + Sbjct: 294 IAPGATQEISSQFYVGPKDQKALSALSDT-----LNLVVDYGFLWWLAVPIHWLLMFYQS 348 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G+AI+L T+ V+ L FPL K QY S A M+N+QPK+ +L+E+F Q + +AM Sbjct: 349 FVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGD-DRQKMGQAM 407 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 408 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQDPYY--- 464 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KM P P D Q ++ WMP++F Sbjct: 465 ----------------ILPLLMGASMFVMQKMQPIAPTMDPMQVKMMQWMPMIFTVFFLW 508 Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557 FP+GL++YW N+++I+QQ +I Sbjct: 509 FPSGLVLYWLVGNIVAIIQQKIIY 532 >gi|283787595|ref|YP_003367460.1| inner membrane protein [Citrobacter rodentium ICC168] gi|282951049|emb|CBG90727.1| inner membrane protein [Citrobacter rodentium ICC168] Length = 547 Score = 339 bits (869), Expect = 7e-91, Method: Composition-based stats. Identities = 138/572 (24%), Positives = 253/572 (44%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ S+ P L + + Y Sbjct: 51 GVPASGQGKLITVKTDVLDLTINTRGGDVEQALLPAYPKELGSSEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDTFVLADGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVLNAGAKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N + + W+ + +Y+A+ ++P + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVNANGGWVAMLQQYFATAWVPRNDGTNN--FYTANLGNGVAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|303325515|ref|ZP_07355958.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp. 3_1_syn3] gi|302863431|gb|EFL86362.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp. 3_1_syn3] Length = 551 Score = 339 bits (869), Expect = 8e-91, Method: Composition-based stats. Identities = 144/581 (24%), Positives = 246/581 (42%), Gaps = 55/581 (9%) Query: 1 MERNWNYFVAIALSVIIVYAW------QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA 54 M+ + N +AI L ++I++ W + P + +++ ++ + A Sbjct: 1 MQDSKNLILAIVLCLVILFGWGRLAEYMGWVQTPDPAAVAQQQEAVRQEAVKAEQRKEEA 60 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 A A + + + +P G L+ + ++ +SP+V ++ Sbjct: 61 AKAATLPAFTPAPGRDLTVDSPLYEAVFYTGGGPLRSFKLKKFQTGLAPDSPLVNMVDER 120 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFE 169 A + N + S W+L SG+ ++LV N + Sbjct: 121 TAAVAPLGLVI------NSQPSWSTGQWSLDSGEQNLKLDAGQQGALRLVGVVDNLRVIR 174 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 + YL K + N + A + +A D SL Sbjct: 175 ELTFNADSYLIKEKIRLINAGDQPRSVRVSYTVASDASNAAGGRYDS--MRVAWDNDGSL 232 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 E+ S +S+ W G Y+ S +P ++ Y+ Sbjct: 233 SEESSSKTLESTGVQATGKIYWAGAMSTYFLSAVLP---GETNNVTVKGLLQKTVYRTAV 289 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 E + PG+ T + G K+ + ID G F IAK + L Sbjct: 290 EEPENLLAPGQEKELTVSYWLGPKDRTQLLAVSDQ-----LAKSIDLGMFSIIAKGLLWL 344 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + +F+ V N+G+AI+L T+ +K +F+PL K Y S MK +QP + +REK+K + Sbjct: 345 LEFFHKYVHNWGVAIILLTIVIKAVFWPLTAKSYASMEKMKKLQPMMTAIREKYKDNKE- 403 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GW 461 ++ K ++ LYKT+ +NP +GC PIL+Q+PVFF +Y+ + S+E+RHAPF W Sbjct: 404 LMNKEVMALYKTYGVNPASGCVPILIQLPVFFGLYQALLTSIELRHAPFIMYLPFTDKLW 463 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + DL+A DP I P+IM L+MF+Q +MSPP D Q I+ Sbjct: 464 LADLSAKDPYY-------------------ITPVIMGLTMFLQQRMSPPATDPTQQKIMM 504 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++P++F FP+GL+IYW +N++SI QQ ++M+ + A Sbjct: 505 FLPLIFTVLFLGFPSGLVIYWLVNNILSIFQQWLMMRKNKA 545 >gi|296105489|ref|YP_003615635.1| putative inner membrane protein translocase component YidC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059948|gb|ADF64686.1| putative inner membrane protein translocase component YidC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 546 Score = 339 bits (868), Expect = 9e-91, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 250/572 (43%), Gaps = 55/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + E+ +Q S D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW-----------EQDKNPQPQQQTTQTTSSQGSAADQ 48 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A ++ +K L +IN +G + L Y ++ S P L + + Y Sbjct: 49 GVPASGQGKQITVKTDVLELTINTRGGDVEQALLLTYPKELKSTEPFQLL--ETTPEFIY 106 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + I + + +A F +T +L Sbjct: 107 QAQSGLTGRDGPDNPANGARPLYNVENDTFVLADGQNELVIPMTYTDAAGNTFTKTFTLK 166 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 167 RGEYAVNVGYSVQNAGAKPLEVSTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDA 226 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP+ + + + F + G Sbjct: 227 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPNNDGTNN--FYTANLGKGIAAI 284 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 285 GYKSQPVLVQPGQTGKLASTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 339 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 KLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 399 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 400 -QRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 458 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 459 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 499 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 531 >gi|119773151|ref|YP_925891.1| inner membrane protein, 60 kDa [Shewanella amazonensis SB2B] gi|166977413|sp|A1S1G5|OXAA_SHEAM RecName: Full=Inner membrane protein oxaA gi|119765651|gb|ABL98221.1| inner membrane protein, 60 kDa [Shewanella amazonensis SB2B] Length = 541 Score = 339 bits (868), Expect = 9e-91, Method: Composition-based stats. Identities = 138/570 (24%), Positives = 237/570 (41%), Gaps = 39/570 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + Q Q D A + Sbjct: 1 MESQRNLLL-IGLLFVSFLLWQQWESDKAPKPATEVTAAAQIHDQAINSDVPTADAGVPA 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + L IN G L + L+ + +P V L +N +Y Sbjct: 60 TVAATQN--LILVTTDQLEIQINPVGGDIVHAALLTHKLEQNEEAPFVLLEQKNN--FSY 115 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD- 175 A+ + + + + T + L + F + Sbjct: 116 IAQSGLIGRDGIDSAASGRAKFAAAADAYTLADGQDTLEVPLTLTTDAGVTFTKVFVFKR 175 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + + V NNS ++ G+I + + ++ A E+ Sbjct: 176 GQFDVGVDYRVANNSAAPVQVQMYGQIKQTITASESSMMMPTYRGAAFSTADVRYEKYSF 235 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D W+ + Y+ S ++P+ + G A F + Sbjct: 236 DDMGKKDLEEPTLGGWVAMLQHYFVSAWVPAAADKNTLFTSVSAGGLAN--IGFKGSVHD 293 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG + T + + G K+ + +++D+G+ +++A P+ ++ +F + Sbjct: 294 VAPGATETISATFYVGPKDQAALSALSDT-----LNLVVDYGFLWWLAVPIHWILMFFQS 348 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 LV N+G+AI+L T+ V+ L +PL K QYVS A M+N+QPK+ +L+++F Q + +AM Sbjct: 349 LVHNWGVAIILVTLTVRGLLYPLTKAQYVSMAKMRNLQPKLQDLKDRFGD-DRQKMGQAM 407 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI+DL+ DP Sbjct: 408 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWIQDLSVQDPYY--- 464 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533 + P++M SM+ KM P P D Q +L WMP++F Sbjct: 465 ----------------VLPLLMGASMWAMQKMQPMAPNMDPMQQKMLQWMPMIFTVFFLW 508 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW N+++I QQ +I + Sbjct: 509 FPAGLVLYWLVGNLVAITQQKIIYASLEKK 538 >gi|332995877|gb|AEF05932.1| inner membrane protein, 60 kDa [Alteromonas sp. SN2] Length = 550 Score = 339 bits (868), Expect = 1e-90, Method: Composition-based stats. Identities = 138/578 (23%), Positives = 253/578 (43%), Gaps = 46/578 (7%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTV-------KQPNQVDN 51 ME + + +AL S ++ WQ Y ++++ E+ + Q V Sbjct: 1 MESQRSFLIIGLALVSFLLWQQWQKEYGPQPVQQVQTEQAEQVSQGVPSFDDAQSEDVPT 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + A A + + +E+K L I+L G +L + + S P L Sbjct: 61 GDSVPAAKPMASASNANRIIEVKTDGLDLRIDLLGGDVITADLLKFPVTQGSEEPYSLL- 119 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVFKNANNILFE 169 + N Y A+ + + V+ S ++ T + LV+KN + Sbjct: 120 --RSGNNLYVAQSGLIGANGPDASSSGRPVYRTDSNFYEMTGDTLEVPLVWKNDQGLTVT 177 Query: 170 RTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMR--HKPQTATNTFGVQEGFIAVLGD 226 +T +HY + TV NNS ++ + G + Sbjct: 178 KTFIFKKDHYNVAVNYTVQNNSGAAANVQQYAQLKQVIDAEDDGNMFMPTYRGAAYSTEE 237 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + + DI + W G+ + Y+ S ++P ++ + +S+ +A Sbjct: 238 DRYQKYTFDDIADDKLRET-TKAGWAGMLEHYFVSAWVPPQDQVNTIYSRNISNQYAV-- 294 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + G++ T ++ L+ G K+ + + ++ +D+G ++I++ + Sbjct: 295 IGVLMPAAVVNTGEAKTLSSTLYMGPKDQDKLKEIAR-----GLDLTVDYGILWWISQSL 349 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+++ ++LV N+G+AI+L T+ VK + L KKQY S A M+N+ PK+ +L+++F Sbjct: 350 FSLLTFLHSLVNNWGVAIILITIVVKGAMYWLTKKQYESMARMRNLAPKMQQLKDRFGD- 408 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + ++M++LYK +NP+ GC P++LQ+P+F A+Y V+ S+E+RHA F WI DL+ Sbjct: 409 DRQKMSQSMMELYKKEKVNPMGGCLPLVLQMPIFLALYWVLMESVELRHADFALWITDLS 468 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 DP + PI+ SM++ K+ P D Q I+ +MPV Sbjct: 469 VKDPYF-------------------VLPILTGASMYLLQKLQPTTITDPMQQKIMQFMPV 509 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW SN+I++VQ +I Sbjct: 510 AMSVFFLWFPAGLVLYWLVSNIITLVQAKMIYASMEKR 547 >gi|168235484|ref|ZP_02660542.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734490|ref|YP_002116785.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|204928556|ref|ZP_03219755.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|254778160|sp|B4TN10|OXAA_SALSV RecName: Full=Inner membrane protein oxaA gi|194709992|gb|ACF89213.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291370|gb|EDY30722.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204321989|gb|EDZ07187.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|320088263|emb|CBY98025.1| Inner membrane protein oxaA [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322617246|gb|EFY14151.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619066|gb|EFY15952.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625133|gb|EFY21961.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630184|gb|EFY26955.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634390|gb|EFY31124.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635275|gb|EFY31990.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642901|gb|EFY39485.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647619|gb|EFY44106.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650575|gb|EFY46982.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656399|gb|EFY52691.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661579|gb|EFY57802.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661660|gb|EFY57879.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668226|gb|EFY64384.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672845|gb|EFY68953.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322674974|gb|EFY71060.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683664|gb|EFY79677.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687740|gb|EFY83709.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192045|gb|EFZ77280.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200527|gb|EFZ85605.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204953|gb|EFZ89938.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206696|gb|EFZ91653.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211768|gb|EFZ96601.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218630|gb|EGA03337.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220031|gb|EGA04501.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224801|gb|EGA09066.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232490|gb|EGA16592.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235265|gb|EGA19350.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241053|gb|EGA25090.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241397|gb|EGA25429.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248628|gb|EGA32558.1| membrane protein insertase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252073|gb|EGA35933.1| membrane protein insertase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258623|gb|EGA42286.1| membrane protein insertase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262346|gb|EGA45904.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268182|gb|EGA51658.1| membrane protein insertase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270596|gb|EGA54041.1| membrane protein insertase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 548 Score = 339 bits (868), Expect = 1e-90, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|190150778|ref|YP_001969303.1| inner membrane protein OxaA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250854|ref|ZP_07337047.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253770|ref|ZP_07339905.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248474|ref|ZP_07530494.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|254772740|sp|B3H2D6|OXAA_ACTP7 RecName: Full=Inner membrane protein oxaA gi|189915909|gb|ACE62161.1| inner membrane protein OxaA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302647354|gb|EFL77575.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650269|gb|EFL80432.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306855042|gb|EFM87225.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 542 Score = 339 bits (868), Expect = 1e-90, Method: Composition-based stats. Identities = 141/566 (24%), Positives = 256/566 (45%), Gaps = 34/566 (6%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M N + V + +S +I WQ + E ++ Q D A+ Sbjct: 1 MNSNRSLLVMGLLLVSFLIFTQWQQDFNP---EIQAQKQAQQQAQVASQSGDVPAASNAN 57 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A+ + V L++ L +I+ G +L ++ +++S +P L + + T Sbjct: 58 TVIAENATQGKTVTLESDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATTYV 117 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 A + N P + + + F+ + + + Y Sbjct: 118 AQSGLVGKNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFVLKRGSY 177 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 + V N + + P G+I +++ + A ++ ++ Sbjct: 178 DVAVNFNVKNQTAATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDM 237 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + + + + W+ + Y+ S ++P+++ + + + TI P Sbjct: 238 EKANLDINTKAGWVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGPVTTIAP 294 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 T T+ L+ G K+ + + ++ +D+GW +FIAKP+F L+++ ++V Sbjct: 295 NSEATITSQLWTGPKDQKEMEATAAN-----LDLTVDYGWAWFIAKPLFALLTFIQSIVT 349 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+RE+F Q + + M++L Sbjct: 350 NWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMSQEMMKL 408 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 409 YKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------ 462 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 I P++M SMF+ KMSP P D Q ++ +MPV+F FP+G Sbjct: 463 -------------ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSG 509 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563 L++YW SN+I+IVQQ +I + + Sbjct: 510 LVLYWLTSNIITIVQQWLIYRNLEKK 535 >gi|56415715|ref|YP_152790.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161616962|ref|YP_001590927.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168234429|ref|ZP_02659487.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168464827|ref|ZP_02698719.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194468665|ref|ZP_03074649.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197249737|ref|YP_002148779.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197364643|ref|YP_002144280.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|238913094|ref|ZP_04656931.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|81678053|sp|Q5PKU2|OXAA_SALPA RecName: Full=Inner membrane protein oxaA gi|189036360|sp|A9MX83|OXAA_SALPB RecName: Full=Inner membrane protein oxaA gi|254773019|sp|B5EYX5|OXAA_SALA4 RecName: Full=Inner membrane protein oxaA gi|254778159|sp|B5BIL8|OXAA_SALPK RecName: Full=Inner membrane protein oxaA gi|56129972|gb|AAV79478.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161366326|gb|ABX70094.1| hypothetical protein SPAB_04783 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194455029|gb|EDX43868.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195632342|gb|EDX50826.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197096120|emb|CAR61716.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213440|gb|ACH50837.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205331641|gb|EDZ18405.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 548 Score = 339 bits (868), Expect = 1e-90, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|194446373|ref|YP_002043091.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|254778157|sp|B4SYB1|OXAA_SALNS RecName: Full=Inner membrane protein oxaA gi|194405036|gb|ACF65258.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 548 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + + +A F +T Sbjct: 109 QAQSGLTGRGGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|58617041|ref|YP_196240.1| putative inner membrane protein translocase component YidC [Ehrlichia ruminantium str. Gardel] gi|58416653|emb|CAI27766.1| 60 kD inner-membrane protein [Ehrlichia ruminantium str. Gardel] Length = 575 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 210/585 (35%), Positives = 335/585 (57%), Gaps = 25/585 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N A+ LSV+I+ W+ Y E+ + ++ + + + Sbjct: 1 MLEIRNLVFAVVLSVLIMMGWRLVY-----EKFFTVQHVVEDEDSSSMIPEIDNVLTYRS 55 Query: 61 RAQALSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R + + + RV+L N + GSI+LKGAQ DDL + YH+ ++S + LLSP NT+ Sbjct: 56 RNEIIDSTQNLRVKLSNKEINGSISLKGAQLDDLVFKNYHITPDNSSDGIILLSPENTEG 115 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YF E ++ + I +PN + W +L+P + L + N ++F+ ++LD++Y Sbjct: 116 VYFIEFGWIDPQHKIVVPNQLSTWT-SDKSVLSPNNTVTLTWNNQQGVIFQIKVTLDDYY 174 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +FKI + NN+ + + P GRI R + T + + EG + G +L E Y +I Sbjct: 175 MFKIEQIIINNTDNVVNLIPYGRINRARHTTEKSYWISHEGAVGSFGY-TLKEWTYKNII 233 Query: 239 KSSISNFHE----SNSWLGISDKYWASVFIPSKETSFHSQFKYLS----DGHARYQAKFS 290 K + N W+GI+DKYW + IP+ ++ + R+Q FS Sbjct: 234 KERNIKISQQNTDDNQWVGIADKYWFTALIPNILQKKSKLSFHVKHGKYNNEDRFQVDFS 293 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + + P K+ ++T++LFAGAKE + Y+KDL I F+ +D+G YFI KP+F+L+ Sbjct: 294 HDSYSAYPNKTASSTSYLFAGAKELKLLDKYKKDLNISLFDKAVDFGILYFITKPVFLLL 353 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 YFY+L+GNFG+AI+L T+ +KL+ FPL+ K YVS +K +QP+I +++E +K ++ Sbjct: 354 EYFYDLIGNFGLAILLLTIVIKLIMFPLSYKSYVSMFKLKYLQPEILKIKELYKNDNTKM 413 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 K + L+K ++++P++G PIL+QIPVFFA+YKV+ +++EMRHAPF+ W+KDL+ D Sbjct: 414 -SKEVSLLFKKNDVSPMSGFIPILIQIPVFFALYKVLFVTIEMRHAPFYLWVKDLSNFDT 472 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-----ADKGQAMILNWMPV 525 N+ TLFG+L F P + +GI P+I+ ++M IQ KM+ DK QA + ++P Sbjct: 473 ANVLTLFGLLNFNPP--ICIGILPVILGITMIIQQKMNTSTHSSQDQDKIQASFIKFLPY 530 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 VF+F SSFP GLIIYW SN I+I+QQ +I G + L L Sbjct: 531 VFIFIFSSFPTGLIIYWICSNSITIIQQLIIKAYIGRKFNLKHDL 575 >gi|261341634|ref|ZP_05969492.1| hypothetical protein ENTCAN_08100 [Enterobacter cancerogenus ATCC 35316] gi|288315989|gb|EFC54927.1| membrane protein insertase, YidC/Oxa1 family [Enterobacter cancerogenus ATCC 35316] Length = 547 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 255/572 (44%), Gaps = 54/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A ++ +K L +IN +G + L Y ++ S P L + + Y Sbjct: 50 GVPASGQGKQITVKTDVLELTINTRGGDVEQALLLTYPKELKSTEPFQLL--ETTPEFIY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + I + + +A F +T +L Sbjct: 108 QAQSGLTGRDGPDNPANGARPLYNVDSDTFVLADGQNEIAIPMTYTDAAGNTFTKTFTLK 167 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 168 RGEYAVNVGYSVQNAGEKPLELSTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDT 227 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ ++P+ + + + F + G+ Sbjct: 228 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWVPNNDGTNN--FYTANLGNGIAAI 285 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 286 GYKSQPVLVQPGQTGKLASTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 340 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 KLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIAAMRERLGDDK 400 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 401 -QRQSQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSA 459 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 460 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 500 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 532 >gi|289209759|ref|YP_003461825.1| membrane protein insertase, YidC/Oxa1 family [Thioalkalivibrio sp. K90mix] gi|288945390|gb|ADC73089.1| membrane protein insertase, YidC/Oxa1 family [Thioalkalivibrio sp. K90mix] Length = 567 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 141/585 (24%), Positives = 239/585 (40%), Gaps = 56/585 (9%) Query: 1 MERNWNYF---VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ +A L ++ AW Y P E E++ +P V ++ Sbjct: 1 MDNLRPLLWLSLAFVL-FLMWQAWNQDYGTPAQPE-TAEQEAEDPDARPEDVPDAPQFED 58 Query: 58 IDDRAQALSMSP----------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 DD A +S + ++ I+ +G +L Y D+ + P+ Sbjct: 59 EDDPRAAADVSEISPIQEPDRRQFTVRTDKHELLIDTRGGTILRADLLQYPRDL-QDDPL 117 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELP-----NSNTVWNLISGKILTPTTPIKLVFKN 162 V + + Y A+ N + + + + L Sbjct: 118 VPVRLFDHRVRGYVAQSGLTHDRVNDRAMEGRAPSHHANFEVDGDHFEMAEGDDTLQVPM 177 Query: 163 ------ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 + + +L ++ V N ++ + + Sbjct: 178 RWVSDDGEIEVIKTYTFTRGTHLIEVGYEVRNQGDSTWSGRQYRQLRHGPTPDRESWWLY 237 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 A E+ + W+ + Y+ S ++P + + Sbjct: 238 TFTGAAYFDGSYQRER--FESLADDPIQQRLHGGWVAMIQHYFVSAWVPGDDEVNALYAR 295 Query: 277 YLSD--GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 + G SA +T+ PG+S L+ G K + + E+ + Sbjct: 296 SVPGEVGEEYLIGLHSAEPLTVRPGESGQLQTRLWVGPKLQDELSQIAQ-----GLELTV 350 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+G F F+AKP+F L+ +++VGN+G +I+L T+ +KL FF L+ Y S A M+ + P Sbjct: 351 DYGMFTFLAKPLFWLLDLIHSVVGNWGWSIVLLTILIKLAFFKLSATSYRSMARMRKVAP 410 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 K+ L+E++K Q + +A+++LYK INPL GC PIL+QIPVF A+Y V+ S+E+R Sbjct: 411 KLQALKERYKDDK-QRMNQALMELYKKEKINPLGGCLPILVQIPVFIALYWVLLESVELR 469 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 AP+W WI+DL++ DP I PI+M +SMF+Q K++PPP D Sbjct: 470 QAPWWLWIQDLSSRDPYF-------------------ILPILMGVSMFVQYKLNPPPMDP 510 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q I +P VF + FPAGL++YW +N+ SI QQ I + Sbjct: 511 VQQKIFMALPFVFTIFFAFFPAGLVLYWFTNNLFSIAQQWYITRK 555 >gi|205354571|ref|YP_002228372.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859068|ref|YP_002245719.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|254773021|sp|B5QUQ4|OXAA_SALEP RecName: Full=Inner membrane protein oxaA gi|254773022|sp|B5RFY3|OXAA_SALG2 RecName: Full=Inner membrane protein oxaA gi|205274352|emb|CAR39377.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710871|emb|CAR35235.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326629707|gb|EGE36050.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 548 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|152972613|ref|YP_001337759.1| putative inner membrane protein translocase component YidC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238897216|ref|YP_002921964.1| putative inner membrane protein translocase component YidC [Klebsiella pneumoniae NTUH-K2044] gi|330005210|ref|ZP_08305169.1| membrane protein insertase, YidC/Oxa1 family domain protein [Klebsiella sp. MS 92-3] gi|166975872|sp|A6TG08|OXAA_KLEP7 RecName: Full=Inner membrane protein oxaA gi|150957462|gb|ABR79492.1| inner membrane protein translocase component YidC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549546|dbj|BAH65897.1| inner membrane protein translocase component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328536342|gb|EGF62704.1| membrane protein insertase, YidC/Oxa1 family domain protein [Klebsiella sp. MS 92-3] Length = 548 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 144/573 (25%), Positives = 250/573 (43%), Gaps = 55/573 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN G + L Y + S P L + + Y Sbjct: 50 GVPASGQGKLITVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLL--ETTPQFVY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + I L + + +F +T +L Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYNVDKEAFVLADGQDELVIPLTYTDKAGNVFTKTFTLK 167 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT--------NTFGVQEGFIAVLGD 226 Y + +V N S + S G++ + + +T G D Sbjct: 168 RGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTAD 227 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + K+ I + N N W+ + +Y+ + ++P + + F + G+ Sbjct: 228 SKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPRNNGTNN--FYTANLGNGVVA 285 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + + + PG++ + L+ G + P ++ +D+GW +FI++P+ Sbjct: 286 IGYKSQPVLVQPGQTDKLQSTLWVGPAIQDKMAAVA-----PHLDLTVDYGWLWFISQPL 340 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 FKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+ Sbjct: 401 K-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLS 459 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A DP I PIIM +MF KMSP D Q I+ +MPV Sbjct: 460 AQDPYY-------------------ILPIIMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 500 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 IFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR 533 >gi|16767127|ref|NP_462742.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167548869|ref|ZP_02342628.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168260373|ref|ZP_02682346.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|197265232|ref|ZP_03165306.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200387745|ref|ZP_03214357.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|38503121|sp|Q8ZKY4|OXAA_SALTY RecName: Full=Inner membrane protein oxaA gi|16422416|gb|AAL22701.1| putative preprotein translocase subunit YidC [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197243487|gb|EDY26107.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199604843|gb|EDZ03388.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205325671|gb|EDZ13510.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205350262|gb|EDZ36893.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261248983|emb|CBG26840.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996129|gb|ACY91014.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160375|emb|CBW19900.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914971|dbj|BAJ38945.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225560|gb|EFX50615.1| Inner membrane protein translocase component YidC, long form [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132203|gb|ADX19633.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 548 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|46143583|ref|ZP_00134946.2| COG0706: Preprotein translocase subunit YidC [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 542 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 140/566 (24%), Positives = 260/566 (45%), Gaps = 34/566 (6%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M N + V + +S +I WQ + + +++ + + + S A +I Sbjct: 1 MNSNRSLLVMGLLLVSFLIFTQWQQDFNPEIQAQKQAQQQAQVASQSGDVLAASNANTVI 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A+ + V L++ L +I+ G +L ++ +++S +P L + + T Sbjct: 61 ---AENATQGKTVTLESDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATTYV 117 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 A + N P + + + F+ + + + Y Sbjct: 118 AQSGLVGKNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFVLKRGSY 177 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 + V N + + P G+I +++ + A ++ ++ Sbjct: 178 DVAVNFNVKNQTAATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDM 237 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + + + + W+ + Y+ S ++P+++ + + + TI P Sbjct: 238 EKANLDINTKAGWVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGPVTTIAP 294 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 T T+ L+ G K+ + + ++ +D+GW +FIAKP+F L+++ ++V Sbjct: 295 NSEATITSQLWTGPKDQKEMEATAAN-----LDLTVDYGWAWFIAKPLFALLTFIQSIVT 349 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+RE+F Q + + M++L Sbjct: 350 NWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMSQEMMKL 408 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 409 YKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------ 462 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 I P++M SMF+ KMSP P D Q ++ +MPV+F FP+G Sbjct: 463 -------------ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSG 509 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563 L++YW SN+I+IVQQ +I + + Sbjct: 510 LVLYWLTSNIITIVQQWLIYRNLEKK 535 >gi|168242063|ref|ZP_02666995.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448004|ref|YP_002047874.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|254773052|sp|B4TAV2|OXAA_SALHS RecName: Full=Inner membrane protein oxaA gi|194406308|gb|ACF66527.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205338842|gb|EDZ25606.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 548 Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 142/577 (24%), Positives = 252/577 (43%), Gaps = 53/577 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRSLEKR 538 >gi|198243281|ref|YP_002217791.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|254773020|sp|B5FN13|OXAA_SALDC RecName: Full=Inner membrane protein oxaA gi|197937797|gb|ACH75130.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 548 Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|161505628|ref|YP_001572740.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189036359|sp|A9MJT7|OXAA_SALAR RecName: Full=Inner membrane protein oxaA gi|160866975|gb|ABX23598.1| hypothetical protein SARI_03804 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 548 Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 141/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ S+ P L + + Y Sbjct: 51 GVPASGQGKLITVKTDVLDLTINTRGGDVEQALLPAYPKELGSSEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEISTFGQLKQSINLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|254515874|ref|ZP_05127934.1| 60 kDa inner membrane insertion protein [gamma proteobacterium NOR5-3] gi|219675596|gb|EED31962.1| 60 kDa inner membrane insertion protein [gamma proteobacterium NOR5-3] Length = 586 Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 148/606 (24%), Positives = 264/606 (43%), Gaps = 77/606 (12%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNF-------------------YVYPRIEEMNNERKN 39 M+ + + LS +++ W NF + + + Sbjct: 1 MDIQRTLLIGAIMLLSFMLLTEWVNFKTVKDEVVVTETRLTASPDFQADSSNADSATTQA 60 Query: 40 IQTVKQPNQVDN--------------------SYAAVLIDDRAQALSMSPRVELKNPSLI 79 + P + + S + A S V++ SL Sbjct: 61 VGNSDLPADLPDDTLSNTSISTAADIDDIPAVSASVDAGTSAAAVTSTGNIVQVYTDSLQ 120 Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNS 138 +I+L G ++ L + ++ LL +N++ Y A+ + + + + Sbjct: 121 VAIDLNGGDIVEVALAKFLAEIDDPETPFVLL-ENNSRRVYVAQSGLIGRDGIDSKSRAT 179 Query: 139 NTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFS 197 + + L++ N + + + + Y+ + + N S +Q + + Sbjct: 180 YRTAQTRYDLGSADSLQVDLLWSNDEGVKVTKRFNFQRDSYVVDVEFIIDNQSGEQWQGN 239 Query: 198 PRGRIMRHKPQTATN-----TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWL 252 G+I R TN G D + + D + S W+ Sbjct: 240 LFGQIKRDSSAAVTNGGGGMGMQPFLGAATTTADDRFKKFSF-DNMRKEPFREQHSGGWI 298 Query: 253 GISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 + Y+ S +IP+ E + + + G A F++ I + PG + + +AG Sbjct: 299 AMIQHYFLSAWIPAPEQTHTYSTRVTNSGFN--IAGFTSPAINVDPGSTREVSARFYAGP 356 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 K+ ++ P E+ +D+GW +++A+P+F L++ Y+LVGN+G AI+L TV +K Sbjct: 357 KDQYSLQEIS-----PYLELSVDYGWLWWVAQPLFWLLTKIYSLVGNWGAAIILLTVLIK 411 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 +FF L+ Y S ANM+ +QPK+ ++RE++ Q +AM++LY+ INP+ GC P Sbjct: 412 AVFFKLSATSYKSMANMRRVQPKMADIREQYADDK-QKQSQAMMELYRKEKINPMGGCLP 470 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+Q+PVF A+Y ++ S+E+R APF WI DL+ DP + Sbjct: 471 ILVQMPVFIALYWMLMESVELRQAPFMLWINDLSVMDPYF-------------------V 511 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P++M SMF K++PPP D QA I+ W+PV+F F FPAGL++YW +N++S+ Q Sbjct: 512 LPLMMGASMFFMQKLNPPPPDPMQAKIMQWLPVIFTFFFLWFPAGLVLYWVVNNLLSMAQ 571 Query: 553 QAVIMK 558 Q VI + Sbjct: 572 QYVITR 577 >gi|89092261|ref|ZP_01165215.1| inner membrane protein, 60 kDa [Oceanospirillum sp. MED92] gi|89083349|gb|EAR62567.1| inner membrane protein, 60 kDa [Oceanospirillum sp. MED92] Length = 545 Score = 338 bits (866), Expect = 2e-90, Method: Composition-based stats. Identities = 136/572 (23%), Positives = 240/572 (41%), Gaps = 46/572 (8%) Query: 1 MERNWNYFVAIA--LSVIIVYAWQNFYVYPRIEEMNNER----KNIQTVKQPNQVDNSYA 54 M+ + +S ++V W Y + + +++ Sbjct: 1 MDVQRIILIGALCLISYMLVLQWNQDYGQQPEAQQATTSVSAYDTQPVATDLPKAEDTAQ 60 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + A+ + + +K L I+ KG L Y + S P V L Sbjct: 61 TGDVPGTAEQAQQAQLITVKTDVLDIIIDTKGGDIIQAALPQYKAALGSELPFVLL--KQ 118 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI---LTPTTPIKLVFKNANNILFERT 171 NT Y ++ V P + + + T + L F + + + Sbjct: 119 NTNRTYVSQSGLVGKNGPDASPEGRPTYAVTKNEYLLGDQDTLAVDLTFTDKQGVQITKR 178 Query: 172 ISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGD 226 + Y + V N S Q + G+I R + G + + Sbjct: 179 YTFTKGSYEINLEFIVNNQSEQQWAGNLFGQIKRDRSDDPTQSTDMGMQSYLGGVFSTAE 238 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + + D++ + ++ +S Y+ S +IP+ + Q + L+ Y Sbjct: 239 DPYEKIDFDDMDDGQFKK-SSPDGYVAMSQHYFLSAWIPAPGAEYSYQSRKLNGN---YI 294 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 F + + + G+ + + G K+ + +++ + +D+GW ++IA P+ Sbjct: 295 VGFLSPDFLVNAGEDKKVSATFYVGPKDQEIMELAQEN-----LPLTVDYGWLWWIASPL 349 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 +ML+ + Y LVGN+G+AI+ T+ VK F L K + S A M+ P++ L+E + Sbjct: 350 YMLLKWIYGLVGNWGLAIIGITIVVKAALFHLNAKAFKSMAKMRKFGPEMTRLKELYGD- 408 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + + M++LY+ INPL GC PIL Q+P+F A+Y V+ S+++RHA + ++ DL+ Sbjct: 409 DRQKMSQEMMKLYQKEKINPLGGCLPILAQMPIFIALYWVLMESVDLRHA-EFLYLADLS 467 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP I PIIM +SMFIQ ++P P D QA I+ +P++ Sbjct: 468 VKDPYF-------------------ILPIIMGVSMFIQQMLNPTPPDPMQAKIMKMLPIM 508 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F F FPAGL +YW +N++SI QQ VI K Sbjct: 509 FTFFFLWFPAGLTLYWVVNNILSIAQQYVINK 540 >gi|262040469|ref|ZP_06013712.1| YidC/Oxa1 family membrane protein insertase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042222|gb|EEW43250.1| YidC/Oxa1 family membrane protein insertase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 548 Score = 338 bits (866), Expect = 2e-90, Method: Composition-based stats. Identities = 144/573 (25%), Positives = 250/573 (43%), Gaps = 55/573 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN G + L Y + S P L + + Y Sbjct: 50 GVPASGQGKLITVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLL--ETTPQFVY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + I L + + +F +T +L Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYNVDKEAFVLADGQDELVIPLTYTDKAGNVFTKTFTLK 167 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT--------NTFGVQEGFIAVLGD 226 Y + +V N S + S G++ + + +T G D Sbjct: 168 RGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTAD 227 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + K+ I + N N W+ + +Y+ + ++P + + F + G+ Sbjct: 228 SKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPRNNGTNN--FYTANLGNGVVA 285 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + + + PG++ + L+ G + P ++ +D+GW +FI++P+ Sbjct: 286 IGYKSQPVLVQPGQTDKLQSTLWVGPAIQDKMAAVA-----PHLDLTVDYGWLWFISQPL 340 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 FKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+ Sbjct: 401 K-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLS 459 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A DP I PIIM +MF KMSP D Q I+ +MPV Sbjct: 460 AQDPYY-------------------ILPIIMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 500 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 IFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR 533 >gi|224585641|ref|YP_002639440.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254778158|sp|C0Q2L3|OXAA_SALPC RecName: Full=Inner membrane protein oxaA gi|224470169|gb|ACN47999.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 548 Score = 338 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTSAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|84394512|ref|ZP_00993222.1| putative inner membrane protein translocase component YidC [Vibrio splendidus 12B01] gi|84374865|gb|EAP91802.1| putative inner membrane protein translocase component YidC [Vibrio splendidus 12B01] Length = 540 Score = 338 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 137/570 (24%), Positives = 242/570 (42%), Gaps = 42/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V E+ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWNVAQNPAPQAIEQAQSGSTLPAPSYADDLDPAPG-- 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Q ++ + + + L SI+ G NL Y + S V L + + + Sbjct: 58 --QQVASAKTITVTTDVLTLSIDTVGGDVVQANLNDYSAEFDSEDTFVLL--KNEPGHQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V + + + + I + ++ + + Sbjct: 114 IAQSGLVGPQGIDLSSTNRPSYTVSADSFTLADGQDELRIPMTYQANGLDYTKTFVLKRG 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y + V NNS F + ++ + T G D + + Sbjct: 174 SYAMDVEYDVVNNSGTNATFGMYAHLRQNVMDDGGSLTMPTYRGGAYSTEDTRYKKYSFD 233 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S + W + Y+AS +IP E + + + + Sbjct: 234 DMQDRNLSLNLANGQGWAAMIQHYFASAWIPRDEAGSNLYTRVIGNLGD---IGVRMPNK 290 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G + L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 291 TIATGDEASFKATLWVGPKLQDQMAAVA-----PNLDLVVDYGWLWFIAKPLHTLLSFIQ 345 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +V N+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 GIVVNWGLAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGD-DRQRMSQE 404 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PI+LQ+P+F ++Y + S+E+RH+PF+GWI DL+A DP Sbjct: 405 MMELYKKEKVNPLGGCLPIILQMPIFISLYWALMESVELRHSPFFGWITDLSAQDPYY-- 462 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 505 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + + Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYRALEKK 535 >gi|165976859|ref|YP_001652452.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|254772741|sp|B0BR23|OXAA_ACTPJ RecName: Full=Inner membrane protein oxaA gi|165876960|gb|ABY70008.1| 60 kD inner-membrane protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 542 Score = 338 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 141/566 (24%), Positives = 256/566 (45%), Gaps = 34/566 (6%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M N + V + +S +I WQ + E ++ Q D A+ Sbjct: 1 MNSNRSLLVMGLLLVSFLIFTQWQQDFNP---EIQAQKQAQQQAQVASQSGDVPAASNAN 57 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A+ + V L++ L +I+ G +L ++ +++S +P L + + T Sbjct: 58 TVIAENATQGKTVTLESDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATTYV 117 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 A + N P + + + F+ + + + Y Sbjct: 118 AQSGLVGKNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFVLKRGSY 177 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 + V N + + P G+I +++ + A ++ ++ Sbjct: 178 DVAVNFNVKNQTAATVEVQPYGQIKYTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDM 237 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + + + + W+ + Y+ S ++P+++ + + + TI P Sbjct: 238 EKANLDINTKAGWVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGPVTTIAP 294 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 T T+ L+ G K+ + + ++ +D+GW +FIAKP+F L+++ ++V Sbjct: 295 NSEATITSQLWTGPKDQKEMEATAAN-----LDLTVDYGWAWFIAKPLFALLTFIQSIVT 349 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+RE+F Q + + M++L Sbjct: 350 NWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMSQEMMKL 408 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 409 YKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------ 462 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 I P++M SMF+ KMSP P D Q ++ +MPV+F FP+G Sbjct: 463 -------------ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSG 509 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563 L++YW SN+I+IVQQ +I + + Sbjct: 510 LVLYWLTSNIITIVQQWLIYRNLEKK 535 >gi|254483195|ref|ZP_05096428.1| 60Kd inner membrane protein [marine gamma proteobacterium HTCC2148] gi|214036566|gb|EEB77240.1| 60Kd inner membrane protein [marine gamma proteobacterium HTCC2148] Length = 565 Score = 338 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 152/586 (25%), Positives = 261/586 (44%), Gaps = 57/586 (9%) Query: 1 MERNWNYFVAI--ALSVIIVYAWQNFYVYPR-IEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + + LS +++ W F IE R T ++ L Sbjct: 1 MDLQRSLLIGAIAVLSFMLLTEWVAFKDDKAAIETAQATRLIANTDSNTAELPQVSEPTL 60 Query: 58 IDDRAQALSMSPRVE-----------------LKNPSLIGSINLKGAQFDDLNLRGYHLD 100 S +E ++ SL +I+L G +L L Y + Sbjct: 61 FATDDDVPSTPELIEAEAPPQITQKNSGRIILVRTDSLQLAIDLNGGDIIELALPRYLEE 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 + + LL +++ Y A+ + + + + + ++ + + Sbjct: 121 IDNPDIPFVLLEQNDS-RTYIAQSGLIGSNGIDSKGRALFTASADNFELSESDDTLVVDL 179 Query: 161 K---NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ-----TATN 212 N + +R YL +I V NNS + + + G+I R + Sbjct: 180 NLTTADNIKVTKRFTFTRGEYLVEIDYIVVNNSNARWQANLFGQIKRDSTPAPSASQSGM 239 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 G D + + D+ W+ + Y+ S +IP+ + S + Sbjct: 240 GMQPFLGAAITQPDVRFTKFTFEDMLDDPFKA-QLPGGWIAMFQHYFLSAWIPNSDQSHN 298 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + G A F++ +T+ PG+S TT +AG K+ + P ++ Sbjct: 299 YSTRVTQAGFN--IAGFTSPALTLDPGQSGTTGAQFYAGPKDQYRLAEIS-----PYLDL 351 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 ++D+GW ++IAKP+F L++ ++ VGN+G AI+L TV VK FF L+ Y S A M+ + Sbjct: 352 VVDYGWLWWIAKPLFWLLTNIHSFVGNWGTAIILLTVVVKAAFFKLSATSYRSMARMRKV 411 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP++ ++RE++ Q +AM++LY+ +NP+ GC PIL+Q+PVF A+Y V+ S+E Sbjct: 412 QPQMLDIREQYADDK-QKQSQAMMELYRKEKVNPMGGCLPILVQMPVFIALYWVLMESVE 470 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +RHAPF WIKD++ DP + PI+M SM+ +++PPP Sbjct: 471 LRHAPFALWIKDMSVMDPYF-------------------VLPILMGASMWFMQRLNPPPT 511 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D QA I+ W+P+VF F FPAGL++YW +N++S+ QQ VI K Sbjct: 512 DPMQAKIMQWLPIVFTFFFLWFPAGLVLYWVVNNLLSMAQQYVITK 557 >gi|121606995|ref|YP_984324.1| 60 kDa inner membrane insertion protein [Polaromonas naphthalenivorans CJ2] gi|120595964|gb|ABM39403.1| protein translocase subunit yidC [Polaromonas naphthalenivorans CJ2] Length = 569 Score = 338 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 133/592 (22%), Positives = 242/592 (40%), Gaps = 55/592 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51 M + + +V W + + + V + Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDQWQVFNGHKATFFPSSTQTAKTTGSTAVPSTGSAAVPS 60 Query: 52 SYAAVLIDDRAQALSMSP---------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 A+ + A + +P ++ + L + + +G Y Sbjct: 61 PSASAMPGSPAAVPAGAPLATPSVAKEQLTVNTDVLSLTFDSEGGTLVHTAFNKYKDMTH 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV--- 159 + V L +T Y A+ ++ +N P T+ ++ G+ L +L Sbjct: 121 KDQGFVLL--DQSTNRVYVAQTGLIAGSNGGTFPTHKTLMTVVPGERLLKDGQNELQVKF 178 Query: 160 --FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFG 215 L + Y + + N + +++R P ++ + Sbjct: 179 ESADMGGVKLLKTYTIKRGAYDLAVRHEIINTGTTPVAPQLYLQLVRDGNKPPGESSFYS 238 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 G K + ++ DIE + + +N ++ + Y+AS +I Sbjct: 239 TFTGPAIYTEAKKYQKVEFKDIENNKVDVEKQATNGYVAMVQHYFASAWILPDGLKRDLF 298 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 + + Y I PG + T + F G +E + P E++ Sbjct: 299 LRKVD--TNLYAVGMITPLDPIAPGATKTVDSKFFVGPQEEKVLEALA-----PGLELVK 351 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GW +AKP++ L+ ++ + N+G +I+ + +K+ F+ L K Y S A MK I P Sbjct: 352 DYGWLTILAKPLYWLLDKLHSFIQNWGWSIVALVLLLKIAFYWLNAKAYASMAKMKAINP 411 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 KI E+RE+ K PQ +Q+AM+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+EMR Sbjct: 412 KITEMRERLKD-KPQEMQQAMMKIYREEKVNPMGGCFPIMIQIPVFIALYWVLLSSVEMR 470 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 AP+ WI+DL++ DP I P++M+L+ +Q ++P P D Sbjct: 471 GAPWILWIRDLSSPDPYF-------------------ILPVVMALTTMLQTALNPAPPDP 511 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 QA ++ +MP++F FPAGL++YW +N++SI QQ VI G Sbjct: 512 MQAKLMWFMPLIFSVMFFFFPAGLVLYWITNNILSITQQWVINTRMGVPPQF 563 >gi|319796643|ref|YP_004158283.1| membrane protein insertase, yidc/oxa1 family domain containing [Variovorax paradoxus EPS] gi|315599106|gb|ADU40172.1| membrane protein insertase, YidC/Oxa1 family domain containing [Variovorax paradoxus EPS] Length = 563 Score = 338 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 151/587 (25%), Positives = 243/587 (41%), Gaps = 52/587 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV-------------YPRIEEMNNERKNIQTVKQPN 47 M + + +V W + V + + P Sbjct: 1 MNDIRRTILWVIFGFSLVLLWDQWQVFNGNKPTFLPSSKPAAVATAPAGTTPASSNGVPT 60 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 S A + +A A + +V + +I+ +G + L L+ Y + + Sbjct: 61 ASGTSGNAGAVPTQAAAAAPREQVVVTTDLFKATIDSEGGTVNHLELQKYDE--ADRTKR 118 Query: 108 VTLLSPSNTKNAYFAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLV-----FK 161 V L + Y A+ ++T PN T +G L Sbjct: 119 VVLFENGSPATRYVAQTGLLNTVDTGDRFPNHLTPMTPKAGPREMAAGQNTLEVSFESAP 178 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF--GVQEG 219 + + Y + V N S +++RH A F G Sbjct: 179 VGGLKYTKTYVFHRGDYAIGVRHEVANVSDQPRDAQLYMQLLRHGTVAAGTMFGTNTFTG 238 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKE---TSFHSQF 275 A +K + + DI K I ++ W+ + Y+AS ++ + +F Sbjct: 239 PAAYTNEKKFHKLDFKDIAKGKIEPPPPANDGWIAMVQHYFASAWLLKGDPASEQLRREF 298 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + G + A I PG + T ++ LFAG +E + P +++ D Sbjct: 299 RVKDLGDNLFTVAMVATLPKIAPGTTQTVSSVLFAGPQEEKKLEALA-----PGLDLVKD 353 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G F I+KP++ L+ + +GN+G AI+ V +K F+ L K Y S A MK I PK Sbjct: 354 YGIFAIISKPLYWLLIQLHGFLGNWGWAIVALVVLLKAAFYWLNAKAYASMAKMKAINPK 413 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I E+RE+ K PQ +Q+ M+++YKT +NP+ GC+PI++QIPVF A+Y V+ S+EMRH Sbjct: 414 IMEMRERLKD-KPQEMQQEMMRIYKTEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMRH 472 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 AP+ GWI DL+A DP I P++M+ + Q ++P P D Sbjct: 473 APWIGWITDLSAPDPWY-------------------ILPVVMTATSLFQTWLNPTPPDPM 513 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP+ F FPAGL++YW +NV+SI QQ I K G Sbjct: 514 QAKLMWIMPLAFSVMFIFFPAGLVLYWITNNVLSIAQQWFINKRLGV 560 >gi|77166533|ref|YP_345058.1| 60 kDa inner membrane insertion protein [Nitrosococcus oceani ATCC 19707] gi|254435359|ref|ZP_05048866.1| 60Kd inner membrane protein [Nitrosococcus oceani AFC27] gi|123593186|sp|Q3J6L8|OXAA_NITOC RecName: Full=Inner membrane protein oxaA gi|76884847|gb|ABA59528.1| protein translocase subunit yidC [Nitrosococcus oceani ATCC 19707] gi|207088470|gb|EDZ65742.1| 60Kd inner membrane protein [Nitrosococcus oceani AFC27] Length = 545 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 144/568 (25%), Positives = 256/568 (45%), Gaps = 40/568 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFY------VYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 N+ + AL +++ W + + P V ++ Sbjct: 1 MENYRLILFSALVLVLFLMWDAWQTDYGPIPLLPPPPQPTASSGESSPVLPEAVPDAPPP 60 Query: 56 VLID-DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + D D A L+ +E+K L I + ++ L Y + + + VTLL Sbjct: 61 EMADMDTAPILTGQKTIEVKTDLLAIKIGMASGDLYEVQLLNYPVSLKKPNEPVTLLHKR 120 Query: 115 NTKNAYFAELDYVSTAN---NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + + + + + + E + + + L +++ N I +T Sbjct: 121 D-PDLFVTQSGLRAASGPSITHETVQFSAPKTYYELIEDESSLKVPLTWEDENGIKVTKT 179 Query: 172 ISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 + Y + + N + + R P++ G + ++ Sbjct: 180 YIFQRDSYQIDLNIKIENGTDQAWMGRAYAQFSRTPPESGGMFARSYVGAVFSTQEQEYQ 239 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + D+ S S W+ + Y+ + ++P ++ + + K++ + RY A Sbjct: 240 KVDFGDLASQSFDR-RSSGGWVAMIQHYFVAAWVPREQGTNYYYGKHVQNS--RYIAGVM 296 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + TI PG+S LF G K + P+ + +D+G +A+P+F LM Sbjct: 297 PPQQTIAPGESGQFNLALFTGPKIQDQLAAVA-----PKLNLTVDYGKLTILAEPLFWLM 351 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 S+F+NLVGN+G AI+L T VKL+FF L++ Y S A M+ +QP++ L+E++ Q Sbjct: 352 SWFHNLVGNWGWAIVLLTFVVKLVFFKLSQTSYRSMARMRKLQPRLLALKERYGD-DRQK 410 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + +AM++LY+ +NP+ GC PI++QIPVF A+Y ++ S+E+R APF WI+DL + DP Sbjct: 411 VGQAMMELYRKEKVNPMGGCLPIVVQIPVFIALYWMLLESVELRQAPFIFWIQDLTSKDP 470 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I P++M +SMF+Q K+SP P D QA ++ MPV+F Sbjct: 471 YY-------------------ILPLLMGVSMFVQQKLSPAPTDPIQAKVMALMPVMFTVF 511 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++YW +N++SI QQ I + Sbjct: 512 FVMFPAGLVLYWVVNNILSIAQQWYITR 539 >gi|293393717|ref|ZP_06638025.1| YidC/Oxa1 family membrane protein insertase [Serratia odorifera DSM 4582] gi|291423761|gb|EFE96982.1| YidC/Oxa1 family membrane protein insertase [Serratia odorifera DSM 4582] Length = 544 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 136/569 (23%), Positives = 238/569 (41%), Gaps = 51/569 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + + + + Sbjct: 1 MDSQRNLLL-IALLFVSFMIWQAWQTDHAPQPAAQTTQQTTNAATGDAASQAVP------ 53 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + + L +IN +G + L Y + S++P L + Y Sbjct: 54 ---ASGQGKLITVNTDVLSLTINTRGGDIEQAKLLAYPDTLGSSTPFQLL--ETTPSFVY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ N + T I L + + + Sbjct: 109 QAQSGLTGKNGPDNPANGERPLFQAAQDTFTLADGQDELRIPLTYTRDGVEYTKTFVLKR 168 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLV 230 HY + +V N + S G++ + T +N F + A Sbjct: 169 NHYAVGVDYSVNNKGTTPLELSLFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSTSETK 228 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 +KY+ +K N W+ + +Y+A+ ++P+ T + F G F Sbjct: 229 YEKYA-FDKDENLNVSTQGGWVAMLQQYFATAWVPA--TQGTNTFYTAKPGDNLSTIGFK 285 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 A + + PG L+ G + + P ++ +D+GW +FI++P+F L+ Sbjct: 286 ATPVVVQPGAQQQLNATLWVGPELQDQMAQLA-----PHLDLTVDYGWLWFISQPLFKLL 340 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 341 KFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDK-QR 399 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP Sbjct: 400 MSQEMMALYKAEKVNPLGGCLPLIIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQDP 459 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 460 YY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTV 500 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 FFLWFPSGLVLYYIVSNLVTILQQQLIYR 529 >gi|323496920|ref|ZP_08101948.1| membrane protein insertase [Vibrio sinaloensis DSM 21326] gi|323317994|gb|EGA70977.1| membrane protein insertase [Vibrio sinaloensis DSM 21326] Length = 539 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 139/570 (24%), Positives = 241/570 (42%), Gaps = 43/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V E+ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPTPQPVEQAQSSSTLPAPSFADELDPAPAQQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + + +L SI+ G +L Y ++ S V L + + + Sbjct: 60 -----ASAKTITVTTDALTLSIDTVGGDVVHADLNEYSAELDSADSFVLL--KNEPGHQF 112 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V + + + + + + F + I Sbjct: 113 IAQSGLVGPQGIDLSSTNRPAYAVSADSFTLADGQDELRVPMTFSANGLEYTKTFILKRG 172 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y + V NNS + F + ++ + T G + + + Sbjct: 173 SYAIDVEYNVVNNSGNNATFGMYAHLRQNLLDAGGSITMPTYRGGAYSTEETRYKKYSFE 232 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S W + Y+AS +IP E + + + + Sbjct: 233 DMQDRNLSINLPDGQGWAAMIQHYFASAWIPRNEPGTNLYTRVIGNLGD---IGVRMPNK 289 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G S + L+ G K + P ++++D+GW +FIAKP+ L+S Sbjct: 290 TIASGDSAQMSATLWVGPKLQDQMAEVA-----PNLDLVVDYGWLWFIAKPLHSLLSLIQ 344 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 LV N+GIAI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 345 GLVSNWGIAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 403 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 404 MMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 461 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 462 -----------------ILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 504 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 505 FPSGLVLYWLVSNIVTLIQQTLIYKALEKK 534 >gi|87122922|ref|ZP_01078787.1| inner membrane protein, 60 kDa [Marinomonas sp. MED121] gi|86161795|gb|EAQ63095.1| inner membrane protein, 60 kDa [Marinomonas sp. MED121] Length = 547 Score = 337 bits (864), Expect = 3e-90, Method: Composition-based stats. Identities = 143/573 (24%), Positives = 244/573 (42%), Gaps = 45/573 (7%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFY---VYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 M+ + + ++ W Y + + ++ P+ A+ Sbjct: 1 MDFRRYFLWGALFVVGYMLFLQWNQDYGSVATSNVAQTTQTQEASNNTDLPSTAAAPVAS 60 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 I A+ + + + +LI SI+ G +L Y +SN P V L + Sbjct: 61 NDIVVDAKLPASDTLIRVVTDALIVSIDPVGGDIVKASLPEYKKAQASNEPFVLL--DNG 118 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERT 171 + Y + V + V+ + + + + L F + + + + +T Sbjct: 119 IERIYVTQSGLVGPNGPDASKDGRPVYRVEQSEFKLGDGEDSLAVNLYFTDVHGVQYTKT 178 Query: 172 ISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT----NTFGVQEGFIAVLGD 226 + + + TV NNS + + +I R + + G + Sbjct: 179 FTFQRGEFAVRQQITVDNNSNAAWQGNLFAQIKRDNTEDPSASSGMGLQPYLGGAISTEE 238 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + +SD+ S + + W+ + Y+ S ++P + Sbjct: 239 NPYTKVSFSDM-AESPTKITTTGGWIALLQHYFVSAWVPDSNQKATLYTR---QKGEFNI 294 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 F+ + I G T ++ L+ G K + P E+ +D+GW +++A+P+ Sbjct: 295 IGFTGPSVEIAAGTQGTLSSTLYIGPKLQDQLSVTA-----PNLELTVDYGWLWWLAQPL 349 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L++ + V N+G+AI+L V VK LFF L+ Y S A M+ P++ LRE+ Sbjct: 350 FWLLTAIQSFVINWGVAIILVVVVVKALFFKLSAASYRSMAKMRKFGPELTRLREQHGD- 408 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + AM++LYK INPL GC PIL+Q+PVF A+Y V+ S+E+RHAPF WI DL+ Sbjct: 409 DRQKMSAAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLMESVELRHAPFMLWINDLS 468 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 A DP + PI+M +SM Q ++P P D QA I+ MP+ Sbjct: 469 AMDPYF-------------------VLPILMGISMLGQQMLNPTPPDPMQARIMKIMPIA 509 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 F F FP+GL++YW +N +SI+QQ VI K Sbjct: 510 FTFFFLWFPSGLVLYWVVNNTLSILQQYVITKR 542 >gi|42520132|ref|NP_966047.1| putative inner membrane protein translocase component YidC [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409869|gb|AAS13981.1| 60 kDa inner-membrane protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 569 Score = 337 bits (864), Expect = 3e-90, Method: Composition-based stats. Identities = 212/564 (37%), Positives = 333/564 (59%), Gaps = 20/564 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-RKNIQTVKQPNQVDNSYAAVLID 59 M + +A LS++I+ +W+ Y N +NI+ ++ N A ++ Sbjct: 1 MSEAKSLILAAILSMLIMVSWRIIYDNFFSTSQNQPLIENIEHIE----SFNDLAPIIYQ 56 Query: 60 DRAQALSM--SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 +R++ ++ RV L N + GSI+LKGA+FDDL L YHL+ SS+SP V LLSP+ +K Sbjct: 57 NRSEIINSTREQRVSLTNNMIKGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESK 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 + YFAE ++ +N I++P+S VW + L + N N ILF I+LD++ Sbjct: 117 DVYFAEFGWLDPSNKIKVPDSKAVWRADKLN----QKEVNLSWDNENGILFRMKINLDDN 172 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+FK+ V NN+ D + P G+I R + + + EG + + L E Y DI Sbjct: 173 YMFKVEQVVENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFDN-KLEEWTYKDI 231 Query: 238 EKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEIT 295 K + S +W G +DKYW + IP K + K+ + + ++Q F + Sbjct: 232 SKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNTDKFQVDFVKPYKS 291 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 ILPG S++ N+ FAGAK+ + Y+ L IP F+ +D+G YFI KP+F+L+ YF Sbjct: 292 ILPGASVSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNF 351 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++ NFG+AI+L T+ +KLL L + Y+S +K++QP++ ++E +K + K Sbjct: 352 VLKNFGLAILLLTLVIKLLMLSLFNRSYISMFKVKSLQPELTRIKELYKNDSLK-QHKET 410 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 I L+K +N+NP++ +P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL+A DPTNIFT Sbjct: 411 IALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFFLWIKDLSAPDPTNIFT 470 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFALS 532 LFG+ + P + +GI PII +M IQ K+S D Q ++ ++P + VF S Sbjct: 471 LFGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFS 528 Query: 533 SFPAGLIIYWSWSNVISIVQQAVI 556 SFPAGL+IYW +SN+I+++QQ++I Sbjct: 529 SFPAGLVIYWIFSNIITLIQQSLI 552 >gi|197286946|ref|YP_002152818.1| inner membrane protein translocase component YidC [Proteus mirabilis HI4320] gi|227354814|ref|ZP_03839231.1| Oxa1 family cytochrome oxidase biogenesis protein [Proteus mirabilis ATCC 29906] gi|194684433|emb|CAR46145.1| inner membrane protein [Proteus mirabilis HI4320] gi|227165132|gb|EEI49963.1| Oxa1 family cytochrome oxidase biogenesis protein [Proteus mirabilis ATCC 29906] Length = 546 Score = 337 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 134/568 (23%), Positives = 254/568 (44%), Gaps = 45/568 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + + Q P+ + Sbjct: 1 MDSQRNL-LFIALLFVSFLIWQQWEGDKVSQNTTTTTQVSQQADMPSSDSLAVTG----- 54 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + +K L IN +G D+ +L Y +++S +P L + + Y Sbjct: 55 --NSNEQAKLITVKTDVLDLRINTQGGTIDEADLLAYPAELNSKTPFRLL--ETTPQFLY 110 Query: 121 FAELDYVSTANNIELPNSNTVWNLIS---GKILTPTTPIKLVFKNANNILFERTISLDEH 177 A+ + + G+ + I Sbjct: 111 QAQSGLIGPDGPDQKSRPVYSATQQEFILGENQDELRVPMTFVNEEGVKFVKTFILKKGQ 170 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMR------HKPQTATNTFGVQEGFIAVLGDKSLVE 231 Y I V N + + + G++ + H+ ++N A D++ + Sbjct: 171 YDIGIEYKVENPTDKTLTMNFYGQLKQSVKLPEHRDTGSSNFALHTYRGAAYSSDETNYK 230 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + + + +N W+ + +Y+A+ +IP+K++ ++ + D + + + Sbjct: 231 KYSFGDIEDKNLSITTNNGWIAMLQQYFATAWIPAKDSQNNNFYSITLDNKSIALIGYKS 290 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 IT+ P + T+ L+ G + + P ++ +D+GW +FI++P+F L+ Sbjct: 291 APITVAPNSTQDITSTLWVGPEIQSEMSAIA-----PHLDLSVDYGWLWFISQPLFKLLK 345 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ LRE+ Q + Sbjct: 346 FLHSFIGNWGFSIIMITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAALRERIGDDK-QRM 404 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI+DL+A DP Sbjct: 405 SQEMMALYKQEKVNPLGGCLPLIIQMPIFLALYYMLMGSVELRHAPFILWIQDLSAQDPY 464 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 I P++M ++MFI K+SP D Q I+ +MPVVF Sbjct: 465 Y-------------------ILPLLMGVTMFIIQKLSPTAVTDPMQQKIMTFMPVVFTVF 505 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 506 FLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|167995355|ref|ZP_02576445.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205326982|gb|EDZ13746.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|332990692|gb|AEF09675.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 548 Score = 337 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNEMQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|254796769|ref|YP_003081605.1| inner membrane protein, 60 kDa [Neorickettsia risticii str. Illinois] gi|254590012|gb|ACT69374.1| inner membrane protein, 60 kDa [Neorickettsia risticii str. Illinois] Length = 585 Score = 337 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 178/569 (31%), Positives = 301/569 (52%), Gaps = 22/569 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M++ +N F+A LS +++ W + P E +E ++VK ++++ + Sbjct: 20 MQQTYNVFIATLLSFLVIIGWNLVFYNPAQRESLHEVPKRESVKVYESLESTLS------ 73 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + R+++ + L GSI L G DDL L+ Y LL P+ TK AY Sbjct: 74 -------TERIKISSSKLEGSIQLTGLALDDLILKDYKS--DDLKGQYRLLYPNKTKGAY 124 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 F + + S+ ++LTP P+ + N + +LF+ +S+D++Y+F Sbjct: 125 FINPGWTIPGDAGLRTPSSKTKWQADSELLTPGNPVTFSWDNRSGLLFKVVVSVDDNYMF 184 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK----SLVEQKYSD 236 V N S + + I + P+T + + EG + V+ D+ + + Sbjct: 185 TFKQIVENKSQNDLSVGSHFTITKRLPETNKSMLIMHEGPVGVIKDQLIELKYSKIAKKN 244 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG-HARYQAKFSANEIT 295 + + + W G SDKYW I + ++ D ++ + Sbjct: 245 KSIAFDEDAQNQHGWFGFSDKYWFVSQIFENSSDGKLYISHVDDKSDDIFRITNFNAQKI 304 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G IT LFAG K+ + Y +++ I F+ +D+G YFI KP+ L+ FY+ Sbjct: 305 VRGGGFITKETMLFAGPKKLSLLEEYAQNMRIYLFDRAVDFGVLYFITKPISKLLQVFYH 364 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 LVGNFG+AI+L T F+++L PL+ K +S +K +QP+I +++ ++ L +A Sbjct: 365 LVGNFGVAIILLTFFIRVLMLPLSIKSGISMFKIKELQPEILKIKSIYQNDKD-ALNRAS 423 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++L++ H + P++GC P LLQ+PVFFA+YKVI I++EMR APF+ WI DL+ DPTN+FT Sbjct: 424 VELFRKHRVTPMSGCLPTLLQVPVFFALYKVIFITIEMRQAPFFLWISDLSLPDPTNLFT 483 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534 LFG++ + P F+ +GI PII+ L+M IQ K+SP D QA ++ MP VF+ +SF Sbjct: 484 LFGLINWNCPDFLSIGILPIILGLTMVIQQKLSPSHYEDGTQAFMIKAMPYVFMILFASF 543 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+GL++YW ++N++S+VQQ +I + + Sbjct: 544 PSGLVLYWVFNNILSLVQQFMIGRYLFTK 572 >gi|326319557|ref|YP_004237229.1| membrane protein insertase, YidC/Oxa1 family domain-containing [Acidovorax avenae subsp. avenae ATCC 19860] gi|323376393|gb|ADX48662.1| membrane protein insertase, YidC/Oxa1 family domain containing [Acidovorax avenae subsp. avenae ATCC 19860] Length = 566 Score = 337 bits (863), Expect = 4e-90, Method: Composition-based stats. Identities = 134/590 (22%), Positives = 237/590 (40%), Gaps = 54/590 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51 M + + +V W + + + P V Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQVHNGHKATFFPEPVPAQVASAPAGGGASAPGSVPT 60 Query: 52 SYAAVLIDDRA---------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 AA + + RV + L + + +G L GY Sbjct: 61 PSAAPAAGAQQVPPGGTAAAAPAAPRERVTVTTDVLRLTFDSEGGTLTHGELLGYPDMAD 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 + P L + + Y A+ + + + + I + F++ Sbjct: 121 KSRPFTLL--DDSAQRVYVAQTGLIG-GAGYPTHKTPMAVVPGNRTLQDGQNDISIRFES 177 Query: 163 ---ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQ 217 L + Y + V N + +++R P ++ + Sbjct: 178 PDLGGVKLVKTWTLKRGAYDIAVKHEVVNTGTTPVSPQLYMQLVRDGNKPPGESSFYSTF 237 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFK 276 G K + ++ DIE S N ++ + Y+A+ ++ + + Sbjct: 238 TGPAVYTEAKKYHKVEFKDIESGKAEIDKSSTNGYVAMVQHYFATAWLLADGIQRDLFVR 297 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 + Y + I PG+S T LFAG + + P E++ D+ Sbjct: 298 KVD--TNLYSVGMITSVGEIAPGQSKTLDARLFAGPQIETMLEKLS-----PGLELVKDY 350 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW +AKP++ L+ + ++ N+G +I+ + +K+ F+ L K Y S A MK I PKI Sbjct: 351 GWLTILAKPLYWLLEQLHKILNNWGWSIVGLVLLLKIAFYWLNAKAYASMAKMKAINPKI 410 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E+RE+ K PQ +Q+ M+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+EMR+A Sbjct: 411 MEMRERLKD-KPQQMQQEMMRIYREEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMRNA 469 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ GWI DL++ DP I P++M+ S +Q ++P P D Q Sbjct: 470 PWIGWIHDLSSPDPYF-------------------ILPLLMTASSLLQTALNPAPPDPMQ 510 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 A ++ +MP++F FPAGL++YW +N++SI QQ +I K G Sbjct: 511 AKMMWFMPLIFSVMFFFFPAGLVMYWLTNNILSIAQQWIINKRMGVPPQF 560 >gi|329297777|ref|ZP_08255113.1| membrane protein insertase [Plautia stali symbiont] Length = 548 Score = 337 bits (863), Expect = 4e-90, Method: Composition-based stats. Identities = 137/574 (23%), Positives = 244/574 (42%), Gaps = 57/574 (9%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ + +S +I AWQ + + + A Sbjct: 1 MDSQRNLFLIAFLFVSFMIWQAWQTDHAPQPQHTQTTQNTSS------------AAGDAA 48 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + +K L +IN +G + L Y + S++P L + Sbjct: 49 SSGVPASGQGKTITVKTDVLSLNINTRGGDIEQAQLLTYPDKLGSDAPFQLL--ETTPAF 106 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK-----LVFKNANNILFERTIS 173 Y A+ N S L + N +++ +T Sbjct: 107 VYQAQSGLTGRNGPDNPNNGARPLYTASLDHFEMADGQTELRVPLSWTGENGVVYTKTFV 166 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIM-----RHKPQTATNTFGVQEGF--IAVLG 225 + + + N S + + G++ T +N F + Sbjct: 167 FKRGEFAVNVDYNINNASQQPLEVAMFGQLKLTIDLPKHRDTGSNNFALHTFRGAAYSTS 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D + K+ I + N SN W+ + +Y+A+ ++P T ++ + G+ Sbjct: 227 DAKYEKYKFDTIADNENLNTTTSNGWVAMLQQYFATAWVPR--TQGNNTLYTSNLGNGVA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI G L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSAPVTIAAGAQQDLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKFLHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGD 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL Sbjct: 400 DK-QKQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFVLWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I P+IM ++MF +MSP D Q I+ +MP Sbjct: 459 SAQDPYY-------------------ILPVIMGITMFFIQRMSPTTVTDPMQQKIMTYMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|223041690|ref|ZP_03611886.1| inner membrane protein OxaA [Actinobacillus minor 202] gi|198246541|gb|ACH82230.1| inner membrane protein OxaA [Actinobacillus minor 202] Length = 554 Score = 337 bits (863), Expect = 4e-90, Method: Composition-based stats. Identities = 142/559 (25%), Positives = 244/559 (43%), Gaps = 50/559 (8%) Query: 21 WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIG 80 WQ + +K Q Q D A + A++ S + +++ L Sbjct: 23 WQQDFNP-----EIQAQKQAQIQAQQQSGDVPAATSQTQNVAESNSKGKTITIESDVLRL 77 Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 +++ G D +L +H ++ SN+P L N+K Y A+ + Sbjct: 78 TVDTLGGDVIDSDLLKHHAELHSNTPFELL--QDNSKVLYIAQSGLIGKNGIDTNNGRAQ 135 Query: 141 VWNLISGKILTPTT---PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFS 197 L + L F+ + + Y + + NNS + + Sbjct: 136 YQTTADSFKLADGQNEISVPLTFEKDGVVYTKTFTLKRGSYNVGVDFNIKNNSAEAVEVQ 195 Query: 198 PRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN-----------F 245 P G++ +++ + T G + + + + ++ Sbjct: 196 PYGQLKHTLVESSGSLTMPTYTGGAYSSSETNYKKYSFQEMADEKKRKAEQGIANGGLSI 255 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 + W+ I Y+ S ++P ++ + +G A + T+ P T + Sbjct: 256 ESNTGWVAILQHYFVSAWVPQQDKPMTIYTRVSDNGVA--TIGYRGALTTVAPNSDATIS 313 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 L+ G K+ + ++ D+GW +FIAKP+F L++ +V N+G+AI+ Sbjct: 314 THLWTGPKDQKEMAETAA-----HLDLTADYGWAWFIAKPLFWLLTNIQKVVINWGLAII 368 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 T+ VK L +PL K QY S A M+ +QP+I E+RE+F Q + + M++LYK +N Sbjct: 369 CVTIVVKTLLYPLTKAQYTSMAKMRMLQPRIQEMRERFGD-DRQRMSQEMMKLYKEEKVN 427 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 428 PMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------------- 474 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I P++M SMF+ KMSP P AD Q ++ +MPV+F FP+GL++YW Sbjct: 475 ------ILPLLMGGSMFLLQKMSPTPVADPVQQKVMTFMPVMFTVFFLWFPSGLVLYWLT 528 Query: 545 SNVISIVQQAVIMKMHGAE 563 SN I+I QQ I + + Sbjct: 529 SNCITIAQQWWIYRQLEKK 547 >gi|322716820|gb|EFZ08391.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 548 Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 250/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTHGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTSAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|91795120|ref|YP_564771.1| 60 kDa inner membrane insertion protein [Shewanella denitrificans OS217] gi|123356330|sp|Q12HM8|OXAA_SHEDO RecName: Full=Inner membrane protein oxaA gi|91717122|gb|ABE57048.1| protein translocase subunit yidC [Shewanella denitrificans OS217] Length = 541 Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats. Identities = 133/564 (23%), Positives = 233/564 (41%), Gaps = 39/564 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + + V D A + Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQTDNAPQVAAPQTQVKSHVSAETSSDVPEADGSVST 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ++ + + + L+ IN G L + ++ N P + L ++ Y Sbjct: 60 --AVVASTNLINVTTDQLVIKINPLGGDIVYAALVKHKTEIDKNDPFILL--EQSSDFNY 115 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKI----LTPTTPIKLVFKNANNILFERTISL-D 175 A+ + + S + L + + + + Sbjct: 116 IAQSGLIGRDGIDSSTKGRAQFTTTSSDFSLADDQDKLTVPLTLVTDTGVRYTKVFTFTR 175 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + + V N S ++ G+I + T + A E+ Sbjct: 176 GQFDVGVDYQVNNTSDKSLQLQMYGQIKQTIKPTEGSMMMPTYRGAAFSTSDVRYEKYDF 235 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 + + W + Y+ S +IP + + G A F Sbjct: 236 EDMADMNLSKSTLGGWAAMLQHYFVSAWIPPATDANTIFSSVSAGGFAN--IGFRGAVYD 293 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + PG + + + G K+ + + +++D+G+ +++A P++ L+ F + Sbjct: 294 VAPGSEQSISAQFYVGPKDQKALSAISET-----LNLVVDYGFLWWLAIPIYKLLMIFQS 348 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 LV N+GIAI+L T+ V+ L +PL K QY S A M+N+QPK+ +++E+F Q + +AM Sbjct: 349 LVTNWGIAIILITLTVRGLLYPLTKAQYTSMAKMRNLQPKLADMKERFGD-DRQKMGQAM 407 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NP+ GC PILLQ+P+F A+Y V+ S E+RHAPF WI DL+ DP Sbjct: 408 MELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESYELRHAPFMLWINDLSVQDPYY--- 464 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSS 533 + P++M +SM++ KM P P D Q ++ WMPV+F Sbjct: 465 ----------------VLPLLMGVSMWLMQKMQPIAPTMDPMQVKMMQWMPVIFTVFFLW 508 Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 509 FPAGLVLYWLVGNLVAITQQKIIY 532 >gi|54299007|ref|YP_125376.1| hypothetical protein lpp3074 [Legionella pneumophila str. Paris] gi|81679354|sp|Q5X0M2|OXAA_LEGPA RecName: Full=Inner membrane protein oxaA gi|53752792|emb|CAH14227.1| hypothetical protein lpp3074 [Legionella pneumophila str. Paris] Length = 556 Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats. Identities = 134/579 (23%), Positives = 254/579 (43%), Gaps = 41/579 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-----PNQVDNSYAAV 56 + +AL++I + W + + ++ E+ Q N+ + Sbjct: 1 MDIRRIVLYMALALIGLSLWNAWQIDYPAKQPVEEKTASQLTSDGHLLPQIIPSNAEQPI 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + +A S +++K L I+LK L Y L V + LL + Sbjct: 61 TLKAEEKASSSKQLIQVKTDVLDVDIDLKNGDIVKGLLLDYPLSVEDKNKPFPLLQNQAS 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFERTISL 174 + ++ + + + ++ + + L K+ + + ++ Sbjct: 121 QRYVANSSLFILDGQTPQSLDFDFTSEKEYYELKSDQNQLIVTLNGKSEDGLDVKKEFVF 180 Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA----VLGDKSL 229 YL ++ + N + +++R P+ ++ + G Sbjct: 181 TKGSYLIEVNYKIANTGNSLWKGYFNTQLLRSSPKEDKSSIFHIGSYTGASFSNPGKNRY 240 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + +SD+ KS++ W+ + Y+ S ++P+ ++ Y Sbjct: 241 QKVSFSDMSKSNLD-VDAKGGWIAMQQHYFLSAWVPNADSENKFYTLATDKD---YTIGA 296 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + IT+ P + + L+ G + + P ++ +D+G +F++ +F L Sbjct: 297 VSQPITVKPKEDKIVGSKLYIGPEITSVLKGIS-----PSLDLTVDYGILWFLSSLLFSL 351 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M Y +VGN+G +I+L TV +KL F+ L+ Y S A+M+ +QPK+ LRE++ + Sbjct: 352 MKAIYTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAK 411 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WI DLA+AD Sbjct: 412 -ISQATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASAD 470 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P + + P+IM +M IQ K++P PAD QA ++ ++P++F Sbjct: 471 PYH-------------------VLPLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTG 511 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 +FP+GL++YW +N +SI+QQ I + + E Sbjct: 512 LFWNFPSGLVLYWIVNNTLSILQQWYITRKYSDEKPAKK 550 >gi|288932889|ref|YP_003436948.1| membrane protein insertase, YidC/Oxa1 family domain containing [Klebsiella variicola At-22] gi|288887618|gb|ADC55936.1| membrane protein insertase, YidC/Oxa1 family domain containing [Klebsiella variicola At-22] Length = 548 Score = 336 bits (862), Expect = 5e-90, Method: Composition-based stats. Identities = 144/573 (25%), Positives = 250/573 (43%), Gaps = 55/573 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN G + L Y + S P L + + Y Sbjct: 50 GVPASGQGKLITVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLL--ETTPQFVY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + I L + + +F +T +L Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYNVDKEAFVLADGQDEIVIPLTYTDKAGNVFTKTFTLK 167 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT--------NTFGVQEGFIAVLGD 226 Y + +V N S + S G++ + + +T G D Sbjct: 168 RGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTSD 227 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + K+ I + N N W+ + +Y+ + ++P + + F + G+ Sbjct: 228 TKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPQNNGTNN--FYTANLGNGIVA 285 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + + + PG++ + L+ G + P ++ +D+GW +FI++P+ Sbjct: 286 IGYKSQPVLVQPGQTDKLQSVLWVGPAIQDKMAAVA-----PHLDLTVDYGWLWFISQPL 340 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 FKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+ Sbjct: 401 K-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLS 459 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A DP I PIIM +MF KMSP D Q I+ +MPV Sbjct: 460 AQDPYY-------------------ILPIIMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 500 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 IFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR 533 >gi|290511687|ref|ZP_06551055.1| preprotein translocase YidC subunit [Klebsiella sp. 1_1_55] gi|289775477|gb|EFD83477.1| preprotein translocase YidC subunit [Klebsiella sp. 1_1_55] Length = 548 Score = 336 bits (861), Expect = 5e-90, Method: Composition-based stats. Identities = 144/573 (25%), Positives = 250/573 (43%), Gaps = 55/573 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN G + L Y + S P L + + Y Sbjct: 50 GVPASGQGKLITVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLL--ETTPQFVY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + I L + + +F +T +L Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYSVDKEAFVLADGQDEIVIPLTYTDKAGNVFTKTFTLK 167 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT--------NTFGVQEGFIAVLGD 226 Y + +V N S + S G++ + + +T G D Sbjct: 168 RGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTSD 227 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + K+ I + N N W+ + +Y+ + ++P + + F + G+ Sbjct: 228 TKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPQNNGTNN--FYTANLGNGIVA 285 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + + + PG++ + L+ G + P ++ +D+GW +FI++P+ Sbjct: 286 IGYKSQPVLVQPGQTDKLQSVLWVGPAIQDKMAAVA-----PHLDLTVDYGWLWFISQPL 340 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 FKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+ Sbjct: 401 K-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLS 459 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A DP I PIIM +MF KMSP D Q I+ +MPV Sbjct: 460 AQDPYY-------------------ILPIIMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 500 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 IFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR 533 >gi|52843195|ref|YP_096994.1| inner membrane protein, 60 kDa [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81680366|sp|Q5ZR81|OXAA_LEGPH RecName: Full=Inner membrane protein oxaA gi|52630306|gb|AAU29047.1| inner membrane protein, 60 kDa [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 556 Score = 336 bits (861), Expect = 6e-90, Method: Composition-based stats. Identities = 136/579 (23%), Positives = 253/579 (43%), Gaps = 41/579 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-----PNQVDNSYAAV 56 + +AL++I + W + + ++ E+ Q N+ V Sbjct: 1 MDIRRIVLYMALALIGLSLWNAWQIDYPAKQPVEEKTASQLTSDGHLLPQIIPSNAEQPV 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + +A S +++K L I+LK L Y L V + LL + Sbjct: 61 TLKAEEKASSGKQLIQVKTDVLDVDIDLKNGDIVKGLLLDYPLSVEDKNKPFPLLQNQAS 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFERTISL 174 + +V + + + ++ + L K+ + + ++ Sbjct: 121 QRYVANSSLFVLDGQTPQSLDFDFTSEKEYYELKPDQNQLIVTLNGKSEDGLDVKKEFVF 180 Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA----VLGDKSL 229 YL ++ + N + +++R P+ ++ + G Sbjct: 181 TKGSYLIEVNYKIANTGNSLWKGYFNTQLLRSSPKEDKSSIFHIGSYTGASFSNPGKNRY 240 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + +SD+ KS++ W+ + Y+ S ++P+ ++ Y Sbjct: 241 QKVSFSDMSKSNLD-VDAKGGWIAMQQHYFLSAWVPNADSENKFYTLATDKD---YTIGA 296 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + IT+ P + + L+ G + + P ++ +D+G +F++ +F L Sbjct: 297 VSQPITVKPKEDKIVGSKLYIGPEITSVLKGIS-----PSLDLTVDYGILWFLSSLLFSL 351 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M Y +VGN+G +I+L TV +KL F+ L+ Y S A+M+ +QPK+ LRE++ + Sbjct: 352 MKAIYTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAK 411 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WI DLA+AD Sbjct: 412 -ISQATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASAD 470 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P + + P+IM +M IQ K++P PAD QA ++ ++P++F Sbjct: 471 PYH-------------------VLPLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTG 511 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 +FP+GL++YW +N +SI+QQ I + + E Sbjct: 512 LFWNFPSGLVLYWIVNNTLSILQQWYITRKYSDEKPAKK 550 >gi|323493773|ref|ZP_08098891.1| membrane protein insertase [Vibrio brasiliensis LMG 20546] gi|323311907|gb|EGA65053.1| membrane protein insertase [Vibrio brasiliensis LMG 20546] Length = 539 Score = 336 bits (861), Expect = 6e-90, Method: Composition-based stats. Identities = 141/570 (24%), Positives = 244/570 (42%), Gaps = 43/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V E+ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQVAKNPTPQPVEQAQSSSTLPAPSFADELDPAPAQQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + + L SI+ G + +L Y ++ S P V L + + + Sbjct: 60 -----ASAKTITVTTDVLTLSIDTVGGDVINADLNQYSNELDSADPFVLL--KNEPGHQF 112 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V + + + + + I + F + I Sbjct: 113 IAQSGLVGPQGIDLSSTNRPQYAVSADSFVMADGQDELRIPMTFAANGLEYTKTFIVKRG 172 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y + V N S + F + ++ + T G D + + Sbjct: 173 SYAVDVEYDVVNKSGNNATFGMYAHLRQNLLDAGGSITMPTYRGGAYSTEDTRYKKYSFE 232 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S W + Y+AS +IP E + + + + Sbjct: 233 DMQDRNLSLNLVDGQGWAAMIQHYFASAWIPRDEPGTNLYTRVIGNLGD---IGVRMPNK 289 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G S L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 290 TIADGDSANLKATLWVGPKLQDQMAEVA-----PNLDLVVDYGWLWFIAKPLHTLLSFIQ 344 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 345 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 403 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC P++LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 404 MMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVELRHSPFFGWITDLSAQDPYY-- 461 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 462 -----------------ILPLLMGASMFMIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLF 504 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SNV++++QQ++I K + Sbjct: 505 FPSGLVLYWLVSNVVTLIQQSLIYKALEKK 534 >gi|58578983|ref|YP_197195.1| putative inner membrane protein translocase component YidC [Ehrlichia ruminantium str. Welgevonden] gi|58417609|emb|CAI26813.1| 60 kD inner-membrane protein [Ehrlichia ruminantium str. Welgevonden] Length = 575 Score = 336 bits (861), Expect = 7e-90, Method: Composition-based stats. Identities = 211/585 (36%), Positives = 334/585 (57%), Gaps = 25/585 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N A+ LSV+I+ W+ Y E+ + ++ + + + Sbjct: 1 MLEIRNLVFAVVLSVLIMMGWRLVY-----EKFFTVQHVVEDEDSSSMIPEIDNVLTYRS 55 Query: 61 RAQALSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R + + + RV+L N + GSI LKGAQ DDL + YH+ S+S + LLSP NT+ Sbjct: 56 RNEIIDSTQNLRVKLSNKEINGSILLKGAQLDDLVFKNYHITPDSSSDGIILLSPENTEG 115 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YF E ++ + I +PN + W +L+P + L + N ++F+ ++LD++Y Sbjct: 116 VYFIEFGWIDPQHKIVVPNQLSTWT-SDKSVLSPNNTVTLTWDNQQGVIFQIKVTLDDYY 174 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +FKI + NN+ + + P GRI R + T + + EG + G +L E Y +I Sbjct: 175 MFKIEQIIINNTDNVVNLIPYGRINRARHTTEKSYWISHEGAVGSFGY-TLKEWTYKNII 233 Query: 239 KSSISNFHE----SNSWLGISDKYWASVFIPSKETSFHSQFKYLS----DGHARYQAKFS 290 K + N W+GI+DKYW + IP+ ++ + R+Q FS Sbjct: 234 KERNIKISQQNTDDNQWVGIADKYWFTALIPNILQKKSKLSFHVKHGKYNNEDRFQVDFS 293 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + + P K+ ++T++LFAGAKE + Y+KDL I F+ +D+G YFI KP+F+L+ Sbjct: 294 HDSYSAYPNKTASSTSYLFAGAKELKLLDKYKKDLNISLFDKAVDFGILYFITKPVFLLL 353 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 YFY+L+GNFG+AI+L T+ +KL+ FPL+ K YVS +K +QP+I +++E +K ++ Sbjct: 354 EYFYDLIGNFGLAILLLTIVIKLIMFPLSYKSYVSMFKLKYLQPEILKIKELYKNDNTKM 413 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 K + L+K ++++P++G PIL+QIPVFFA+YKV+ +++EMRHAPF+ W+KDL+ D Sbjct: 414 -SKEVSLLFKKNDVSPMSGFIPILIQIPVFFALYKVLFVTIEMRHAPFYLWVKDLSNFDT 472 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-----ADKGQAMILNWMPV 525 N+ TLFG+L F P + +GI P+I+ ++M IQ KM+ DK QA + ++P Sbjct: 473 ANVLTLFGLLNFNPP--ICIGILPVILGITMIIQQKMNTSTHSSQDQDKIQASFIKFLPY 530 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 VF+F SSFP GLIIYW SN I+I+QQ +I G + L L Sbjct: 531 VFIFIFSSFPTGLIIYWICSNSITIIQQLIIKAYIGRKFNLKHDL 575 >gi|237729027|ref|ZP_04559508.1| inner membrane protein oxaA [Citrobacter sp. 30_2] gi|226909649|gb|EEH95567.1| inner membrane protein oxaA [Citrobacter sp. 30_2] Length = 548 Score = 336 bits (860), Expect = 7e-90, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 255/572 (44%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + +L Y ++ S P L + + Y Sbjct: 51 GVPASGQGKLITVKTDVLDLTINTRGGDVEQASLPAYPKELGSTEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + I + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVDKDAFVLADGQNELQIPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGEYAVNVNYSVQNAGEKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I ++ N + + W+ + +Y+A+ ++P + + + F + G+ Sbjct: 229 KYEKYKFDTIAENENLNVNAKDGWVAMLQQYFATAWVPRNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|225630056|ref|YP_002726847.1| putative inner membrane protein translocase component YidC [Wolbachia sp. wRi] gi|225592037|gb|ACN95056.1| putative inner membrane protein translocase component YidC [Wolbachia sp. wRi] Length = 566 Score = 336 bits (860), Expect = 7e-90, Method: Composition-based stats. Identities = 213/563 (37%), Positives = 332/563 (58%), Gaps = 21/563 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + +A LS++I+ +W+ Y N + + + N A ++ + Sbjct: 1 MSEAKSLILAAILSMLIMVSWRIIYDNFFSTNQNQP------LIEHIESFNDLAPIIHQN 54 Query: 61 RAQALSM--SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R++ ++ RV L N + GSI+LKGA+FDDL L YHL+ SS+SP V LLSP+ +K+ Sbjct: 55 RSEIINSTREQRVSLTNNMIKGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESKD 114 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 YFAE ++ +N I++P+S VW + L + N N ILF I+LD++Y Sbjct: 115 VYFAEFGWLDPSNKIKVPDSKAVWRADKLN----QKEVNLSWDNENGILFRMKINLDDNY 170 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 +FK+ V NN+ D + P G+I R + + + EG + + L E Y DI Sbjct: 171 MFKVEQVVENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFDN-KLEEWTYKDIS 229 Query: 239 KSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITI 296 K I +W G +DKYW +V IP K + K+ + + ++Q F + +I Sbjct: 230 KKHLIKANTSEKNWFGFADKYWLTVIIPEKSDKINVSIKHTNANDIDKFQVDFVKSYKSI 289 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 LPG S + N+ FAGAK+ + Y+ L IP F+ +D+G YFI KP+F+L+ YF + Sbjct: 290 LPGASTSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFV 349 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + NFG+AI+L T+ +KLL PL+ + YVS +K++QP++ ++E +K + K I Sbjct: 350 LKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKVKSLQPELTRVKELYKNDSLK-QHKETI 408 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 L+K +N+NP++ +P+L+QIPVFFA+YKV+ +++EMRHAPF+ WIKDL+A DPTNIFTL Sbjct: 409 ALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFFLWIKDLSAPDPTNIFTL 468 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFALSS 533 FG+ + P + +GI PII +M IQ K+S D Q ++ ++P + VF SS Sbjct: 469 FGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFSS 526 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 FPAGL+IYW +SN+I+++QQ++I Sbjct: 527 FPAGLVIYWIFSNIITLIQQSLI 549 >gi|283836139|ref|ZP_06355880.1| hypothetical protein CIT292_10561 [Citrobacter youngae ATCC 29220] gi|291068329|gb|EFE06438.1| membrane protein insertase, YidC/Oxa1 family [Citrobacter youngae ATCC 29220] Length = 548 Score = 336 bits (860), Expect = 8e-90, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 255/572 (44%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + +L Y ++ S P L + + Y Sbjct: 51 GVPASGQGKLITVKTDVLDLTINTRGGDVEQASLPAYPKELGSTEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + I + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQIPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGEYAVNVNYSVQNAGEKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I ++ N + + W+ + +Y+A+ ++P + + + F + G+ Sbjct: 229 KYEKYKFDTIAENENLNVNAKDGWVAMLQQYFATAWVPRNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|253997709|ref|YP_003049773.1| 60 kDa inner membrane insertion protein [Methylotenera mobilis JLW8] gi|253984388|gb|ACT49246.1| 60 kDa inner membrane insertion protein [Methylotenera mobilis JLW8] Length = 554 Score = 336 bits (860), Expect = 8e-90, Method: Composition-based stats. Identities = 145/568 (25%), Positives = 242/568 (42%), Gaps = 36/568 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER-----KNIQTVKQPNQVDNSYAAV 56 + + S+ I+ W + + + + + + A Sbjct: 1 MDTRRLVLFVIFSMSILMLWDAWQTKHAPVPVAPVASVGSVPSTEAGAEVGAEVGAAAID 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 D A AL + + +IN G L LR + + N LL + Sbjct: 61 APVDTAYALKSGQNIAVTTDLYKININTMGGDLRKLELRKHRA--NDNLSNFLLLDDAAK 118 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 Y A+ + ++ + ++L + + + Sbjct: 119 PMLYVAQTGLIGQDLPTHNTVFSSTAPSYQMQDGQDKLEVRLSAVSNGVAVDKVYTFHRN 178 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + + NN+ I +I+ + + G + + Sbjct: 179 RYEIDVNYEIKNNTSVAITPVVYYQIVHDSESNQGSALMPTFTGGTYYTEAGKFKKLAFK 238 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D+ K ++ ++ W+GI Y+ S +IP + F ++ + T Sbjct: 239 DMAKEPLN-ITTNDGWVGILQHYFVSAWIPKDGLARK--FYTEKLSSNIFRIGTKSTLST 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I PG ++T L++G + + P E +D+GW IA P+F L+S ++ Sbjct: 296 IQPGATLTVPARLYSGPQTKNDLIAAA-----PGLEYSVDYGWLTVIASPLFWLLSKIHS 350 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 LV N+G+AI+L T+ +K FF L+ Y S A M+ + P++ ++EKF Q +Q AM Sbjct: 351 LVQNWGVAIILLTILIKAAFFKLSASGYRSMAQMRELAPRLQSMKEKFGD-DRQKMQMAM 409 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LYK INP+ GC+PIL+Q+PVF A+Y V+ S+E+RHAPF+GWI+DL+A DP Sbjct: 410 MDLYKKEKINPMGGCFPILIQVPVFIALYWVLLGSIELRHAPFFGWIQDLSAIDPFY--- 466 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 + PI+M +M +Q K++P P D QA ++ WMPVVF FP Sbjct: 467 ----------------VLPILMGATMIVQTKLNPKPTDPMQAKVMTWMPVVFSVFFFFFP 510 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 AGL++YW +NV+SI QQ + KM AE Sbjct: 511 AGLVLYWLVNNVLSIAQQWYVNKMIHAE 538 >gi|121596421|ref|YP_988317.1| protein translocase subunit yidC [Acidovorax sp. JS42] gi|120608501|gb|ABM44241.1| protein translocase subunit yidC [Acidovorax sp. JS42] Length = 570 Score = 336 bits (860), Expect = 8e-90, Method: Composition-based stats. Identities = 134/593 (22%), Positives = 229/593 (38%), Gaps = 56/593 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNERKNIQTVKQPNQV- 49 M + + +V W F+ P + + + Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQIHNGNKATFFPTPPAQTASTPAVAASGAGAADVPV 60 Query: 50 --------DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 + A RV + L S + +G L Y Sbjct: 61 AAASATPGAAAQPPAGASVPPAAAIPRKRVTVSTDVLRLSFDSEGGSLVHGELLQYPEME 120 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV-- 159 P LL + Y A+ + P T ++ G +L Sbjct: 121 DKTKPF--LLLDESASRVYVAQTGLIGNGAGGAFPTHKTPMAVVPGPRELQDGQNELTVR 178 Query: 160 ---FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTF 214 L + Y + V N + ++ R P ++ + Sbjct: 179 FESADMGGVKLVKTWTLKRGAYDVAVKHEVVNTGTAPVSPQLYLQLARDGNKPAGESSFY 238 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 G K + ++ DIE + S+ ++ + Y+A+ ++ + Sbjct: 239 STFTGPAVYTEAKKYHKVEFKDIENGKAEIDKSSSDGYVAMVQHYFATAWLLGDGVQRDN 298 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + + Y I PG+S LFAG + + P E++ Sbjct: 299 FVRKVD--TNLYSVGMITPLGEIAPGQSKAVDARLFAGPQIETLLEKLA-----PGLELV 351 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 D+GW +AKP++ L+ + ++ N+G +I+ +K+ F+ L K Y S A MK I Sbjct: 352 KDYGWLTILAKPLYWLLDQLHKVIANWGWSIVALVFLLKIAFYWLNAKAYASMAKMKAIN 411 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P+I E+RE+ K PQ +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+EM Sbjct: 412 PRIMEMRERLKD-KPQQMQQEMMRIYREEKVNPMGGCLPIMIQIPVFIALYWVLLSSVEM 470 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R+AP+ GWIKDL++ DP I P++M+LS +Q ++P P D Sbjct: 471 RNAPWIGWIKDLSSPDPFF-------------------ILPLLMTLSSLLQTALNPAPPD 511 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 QA ++ MP++F FPAGL++YW +N++SI QQ +I G Sbjct: 512 PMQAKMMWLMPLMFSVMFFFFPAGLVLYWLTNNILSIAQQWIINTRMGVPPQF 564 >gi|206575787|ref|YP_002241308.1| inner membrane protein OxaA [Klebsiella pneumoniae 342] gi|254772998|sp|B5XZP5|OXAA_KLEP3 RecName: Full=Inner membrane protein oxaA gi|206564845|gb|ACI06621.1| inner membrane protein OxaA [Klebsiella pneumoniae 342] Length = 548 Score = 336 bits (860), Expect = 8e-90, Method: Composition-based stats. Identities = 144/573 (25%), Positives = 250/573 (43%), Gaps = 55/573 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + KN Q +Q Q + A D Sbjct: 1 MDSQRNLLI-IALLFVSFMIWQAW----------EQDKNPQPQQQTTQTTTTAAGSAADQ 49 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN G + L Y + S P L + + Y Sbjct: 50 GVPASGQGKLITVKTDVLELTINTNGGDIEQALLLAYPKTLKSTEPFQLL--ETTPQFVY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGK-----ILTPTTPIKLVFKNANNILFERTISLD 175 A+ N + + I L + + +F +T +L Sbjct: 108 QAQSGLTGRDGPDNPANGPRPLYSVDKEAFVLADSQDEIVIPLTYTDKAGNVFTKTFTLK 167 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT--------NTFGVQEGFIAVLGD 226 Y + +V N S + S G++ + + +T G D Sbjct: 168 RGGYAVNVGYSVQNASEKPLEVSTFGQLKQTAALPTSRDTQTGGLSTMHTFRGAAFSTSD 227 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + K+ I + N N W+ + +Y+ + ++P + + F + G+ Sbjct: 228 TKYEKYKFDTILDNENLNVSTKNGWVAMLQQYFTTAWVPQNNGTNN--FYTANLGNGIVA 285 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + + + PG++ + L+ G + P ++ +D+GW +FI++P+ Sbjct: 286 IGYKSQPVLVQPGQTDKLQSVLWVGPAIQDKMAAVA-----PHLDLTVDYGWLWFISQPL 340 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 341 FKLLKFIHSFLGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD 400 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+ Sbjct: 401 K-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLSASVELRHAPFILWIHDLS 459 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A DP I PIIM +MF KMSP D Q I+ +MPV Sbjct: 460 AQDPYY-------------------ILPIIMGATMFFIQKMSPTTVTDPMQQKIMTFMPV 500 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 IFTVFFLWFPSGLVVYYIVSNLVTIIQQQLIYR 533 >gi|152980131|ref|YP_001355384.1| preprotein translocase YidC subunit [Janthinobacterium sp. Marseille] gi|166975871|sp|A6T4D7|OXAA_JANMA RecName: Full=Inner membrane protein oxaA gi|151280208|gb|ABR88618.1| preprotein translocase YidC subunit [Janthinobacterium sp. Marseille] Length = 564 Score = 335 bits (859), Expect = 9e-90, Method: Composition-based stats. Identities = 153/580 (26%), Positives = 239/580 (41%), Gaps = 37/580 (6%) Query: 2 ERNWNYFVAIALSVIIVYAW----------QNFYVYPRIEEMNNERKN------IQTVKQ 45 + + S ++ W F+ P + Sbjct: 1 MDIKRTVLWVVFSFSLLMLWDNYNRYTGKPSIFFDNPTTQAAKPAAATDDGKTAAAPTAD 60 Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A + A + S V + + I+ G + L L +H S Sbjct: 61 VPTSSAHAANATGVPDSVAPTKSEIVTITTDLIKADIDTVGGEIRHLELLTHHESSDSTK 120 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 IV L S Y + + + TV + L + Sbjct: 121 DIV--LFDSTPPRTYLGQTGLIG-GAYPNHKSLFTVRPGPRSLEAGDQVQLVLEAEQNGV 177 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP--QTATNTFGVQEGFIAV 223 L + Y I V N + I S +++R + + G Sbjct: 178 KLVKTYTFKRGEYKIDIKHDVINKTAAAINPSLYLQLVRDGSKLNNESMFYSTFTGPAVY 237 Query: 224 LGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + IEK I + + + W+ + Y+ S F+P K L Sbjct: 238 SDSDKFQKVTFESIEKGKIEHVVKAESGWIAMVQHYFVSAFVPPANVPREYFTKKL--AT 295 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y + PG + + L++G +E + P FE++ D+GW I Sbjct: 296 NLYAVGAIMPMGAVAPGATQSMDATLYSGPQESKRLEAVA-----PGFELVKDYGWLTII 350 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+F LM + L+GN+G I++ T+ +KL FFPL+ Y S A MK + PK+ E+R K Sbjct: 351 AKPIFWLMIQIHQLLGNWGWTIVVLTIVIKLAFFPLSAASYRSMAKMKLVTPKMTEIRTK 410 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +K PQ + AM++LYK INPL GC PI++QIPVF ++Y V+ S+EMR+AP+ WI Sbjct: 411 YKG-EPQKMNAAMMELYKKEKINPLGGCMPIVIQIPVFISLYWVLLASVEMRNAPW-LWI 468 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DLA+ D + G + +GI PI+M++SMFIQ K++P P D QA ++ + Sbjct: 469 SDLASPDTLFGSYMIG------SFHLTIGILPILMAISMFIQTKLNPTPPDPIQAKVMMF 522 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP+ F FPAGL++YW +N++SI QQ I K G Sbjct: 523 MPIAFSLMFFFFPAGLVLYWVVNNILSIAQQWTISKKMGI 562 >gi|149911783|ref|ZP_01900387.1| Putative inner membrane protein, 60 kDa [Moritella sp. PE36] gi|149805129|gb|EDM65151.1| Putative inner membrane protein, 60 kDa [Moritella sp. PE36] Length = 547 Score = 335 bits (859), Expect = 9e-90, Method: Composition-based stats. Identities = 136/568 (23%), Positives = 247/568 (43%), Gaps = 40/568 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N V I L + + + + + + S ++ + Sbjct: 1 MESQRNLLV-IGLLFVSFLLFTEWQNKDNPVAVPTTTQAFTNGLTGDVPAGSDSSTDAPN 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Q + + + + L +I+ G +L + ++ + L ++ N Y Sbjct: 60 SKQ---SNNLITISSDVLELTIDTLGGDIVRADLLEHATELDAEERFTLL--QNDATNVY 114 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNANNILFERTISL-DEH 177 A+ + N ++ + T I L + +AN + F + +L + Sbjct: 115 VAQSGLIGANGPDANVNGRPQYSTTATSFTISGDTLSIPLSYTDANGVEFTKIFTLTRGN 174 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRH---KPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 Y + + N S + I G++ ++ T ++ A+ E+ Sbjct: 175 YDVDVSYKINNQSANAISVQMYGQLKQNIDLSEDTGSSMMMQAYRGAALGTTDKRYEKYD 234 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ--AKFSAN 292 D + + + W+G+ Y+ S +IP + + Q F Sbjct: 235 FDDISDANLSRTTTAGWVGMLQHYFVSAWIPGNSQNHFYTLNIGRTDFTQGQAIIGFKQP 294 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 I T + L+ G K + + ++ +D+ W +FIA+P+F L+ + Sbjct: 295 VEAIAANSETTISAKLWLGPKLQDQMGEL-----VEGLDLTVDYSWLWFIAQPLFQLLQF 349 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F+ LVGN+GIA+++ T V+ +PL K QY S A M+ +QPK+ LREK Q + Sbjct: 350 FHGLVGNWGIAVIMITFTVRGAMYPLTKAQYTSMAKMRLLQPKLTALREKCGDDK-QKMS 408 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 ++M+ LYK +NPL GC+P+++Q+P+F ++Y + S+E+RHAPF WI DL+A DP Sbjct: 409 QSMMALYKEEKVNPLGGCFPMIIQMPIFISLYWALMESVELRHAPFALWINDLSAQDPYY 468 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 + P++M ++M++ KMSP D Q ++ +MPV+F F Sbjct: 469 -------------------VLPLLMGVTMYMIQKMSPTQVQDPMQQKVMQFMPVMFTFFF 509 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKM 559 FPAGL++YW SNV++I+QQ +I + Sbjct: 510 LWFPAGLVLYWLMSNVVTIIQQTIIFRS 537 >gi|62182329|ref|YP_218746.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75505468|sp|Q57HZ7|OXAA_SALCH RecName: Full=Inner membrane protein oxaA gi|62129962|gb|AAX67665.1| putative Preprotein translocase subunit YidC [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 548 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 250/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTHGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTQTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTSAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|317050194|ref|YP_004117842.1| membrane protein insertase, YidC/Oxa1 family domain containing [Pantoea sp. At-9b] gi|316951811|gb|ADU71286.1| membrane protein insertase, YidC/Oxa1 family domain containing [Pantoea sp. At-9b] Length = 548 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 246/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N F+ IA + WQ + + Q Q NS A Sbjct: 1 MDSQRNLFL-IAFLFVSFMIWQAW---------QTDHAPQPQQTQTTQTTNSTAGDAATS 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L +IN +G + +L Y + S++P L + Y Sbjct: 51 GVPGSGQGKTITVKTDVLSLNINTRGGDIEQASLLTYPDKLGSDAPFQLL--ETTPAFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK-----LVFKNANNILFERTISLD 175 A+ N + L + N +++ +T Sbjct: 109 QAQSGLTGRNGPDNPNNGARPLFTTTQDHFEMAEGQTELRVPLTWTGENGVVYTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGF--IAVLGDK 227 + + + N S + + G++ + T +N F + D Sbjct: 169 RGEFAVNVDYNINNASQQPLEVAMFGQLKQTIEVPKHRDTGSNNFALHTFRGAAYSTSDA 228 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N SN W+ + +Y+A+ ++P T + + G+ Sbjct: 229 KYEKYKFDTINDNENLNTTTSNGWVAMLQQYFATAWVPR--TEGTNTLYTSNLGNGVAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + +TI PG L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSAPVTIAPGAQQNLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+A Sbjct: 402 -QKMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFILWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I P+IM ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPVIMGITMFFIQKMSPTTVTDPMQQKIMTYMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|114798266|ref|YP_759144.1| inner membrane protein, 60 kDa [Hyphomonas neptunium ATCC 15444] gi|114738440|gb|ABI76565.1| inner membrane protein, 60 kDa [Hyphomonas neptunium ATCC 15444] Length = 606 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 199/613 (32%), Positives = 307/613 (50%), Gaps = 39/613 (6%) Query: 1 ME--RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL- 57 ME N+ +A+A + V+ +Q F + P + E+ +Q D A +L Sbjct: 1 MEPQEQRNFLIAMAAMIAFVFLYQYFVMEPAQKRYEAEQAVAVAAEQAAVTDTGVAEILG 60 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 AL+ RV+ ++ G+I L GA+ DDL+L+ ++ V + + LL P T+ Sbjct: 61 PKSLEDALAEDGRVKFDANAVDGTIRLAGARIDDLSLKQFYTTVEREAE-IRLLRPEATE 119 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 AYF + N + N+VW + G LT TP+ L + + +R IS+D + Sbjct: 120 GAYFGTYYW--ADGNALVAGRNSVWTQVGGDTLTTATPVTLRLETEG-MTIDREISIDAN 176 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKP-----------------QTATNTFGVQEGF 220 Y+F DT+TN S G RH GV +G Sbjct: 177 YMFSFRDTLTNTSGAARTVRAIGSFERHGDWKRFLEITDPASATSGGPAHLGLMGVADGE 236 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF-KYLS 279 + + K L++ K E + F + W G++D YW +P + F + + Sbjct: 237 LRLQKYKPLMQSKKISGESGEGTFFSDEGGWWGLTDMYWMGALVPEQARPFTASVNRASL 296 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 + + I + PG S+T N LFAGAK+F + YEK +PRF IDWGW Sbjct: 297 ARGGPLEVRTEGAAIEVAPGASVTVENGLFAGAKQFEVLQGYEKS-GLPRFVDAIDWGWA 355 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YF+ KP F ++ + +G+FG +I+ TV VKL PL + S A +K +Q + +L Sbjct: 356 YFLTKPFFYVLHWLNGYLGSFGWSILAFTVLVKLPLVPLYNASFKSMAKLKKLQEPMKQL 415 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 E+F + PQ Q+ +++LYK NP+ GC PIL IP+F+A+YK + +SLEMRHAP + Sbjct: 416 NERFA-ADPQRKQQELMKLYKEEGANPIGGCLPILFTIPIFYALYKTLYVSLEMRHAP-F 473 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPG----------FMHVGIWPIIMSLSMFIQMKMSP 509 ++KDL+A DPT I LFG++PF+ + +GI PI+ +M +SP Sbjct: 474 AYLKDLSAPDPTAIGNLFGLIPFWSGADVKSIPIIGIIIGIGILPILYGATMAALQSLSP 533 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 PP DK QA I+ MP+VF+F F AGL++YW WSNV++ +QQ +IM+M+G E L Sbjct: 534 PPPDKMQARIIMAMPIVFMFVFGGFAAGLVMYWVWSNVLTFIQQYIIMRMNGVETELGKF 593 Query: 570 LRSTFS-KNYNSQ 581 + + K ++ Sbjct: 594 VATRLGLKKAQAE 606 >gi|307611885|emb|CBX01601.1| hypothetical protein LPW_32881 [Legionella pneumophila 130b] Length = 556 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 136/579 (23%), Positives = 253/579 (43%), Gaps = 41/579 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-----PNQVDNSYAAV 56 + +AL++I + W + + ++ E+ Q N+ V Sbjct: 1 MDIRRIVLYMALALIGLSLWNAWQIDYPAKQPVEEKTASQLTSDGHLLPQIIPSNAEQPV 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + +A S +++K L I+LK L Y L V + LL + Sbjct: 61 TLKAEEKASSGKQLIQVKTDVLDVDIDLKNGDIVKGLLLDYPLSVEDKNKPFPLLQNQAS 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFERTISL 174 + +V + + + ++ + L K+ + + ++ Sbjct: 121 QRYVANSSLFVLDGQTPQSLDFDFTSEKEYYELKPDQNQLIVTLNGKSEDGLDVKKEFVF 180 Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA----VLGDKSL 229 YL ++ + N + +++R P+ ++ + G Sbjct: 181 TKGSYLIEVNYKIANIGNSLWKGYFNTQLLRSSPKEDKSSIFHIGSYTGASFSNPGKTRY 240 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + +SD+ KS++ W+ + Y+ S ++P+ ++ Y Sbjct: 241 QKVSFSDMSKSNLD-VDAKGGWIAMQQHYFLSAWVPNADSENKFYTLATDKD---YTIGA 296 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + IT+ P + + L+ G + + P ++ +D+G +F++ +F L Sbjct: 297 VSQPITVKPKEDKIVGSKLYIGPEITSVLKGIS-----PSLDLTVDYGILWFLSSLLFSL 351 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M Y +VGN+G +I+L TV +KL F+ L+ Y S A+M+ +QPK+ LRE++ + Sbjct: 352 MKAIYTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAK 411 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WI DLA+AD Sbjct: 412 -ISQATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASAD 470 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P + + P+IM +M IQ K++P PAD QA ++ ++P++F Sbjct: 471 PYH-------------------VLPLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTG 511 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 +FP+GL++YW +N +SI+QQ I + + E Sbjct: 512 LFWNFPSGLVLYWIVNNTLSILQQWYITRKYSDEKPAKK 550 >gi|88608477|ref|YP_506289.1| inner membrane protein, 60 kDa [Neorickettsia sennetsu str. Miyayama] gi|88600646|gb|ABD46114.1| inner membrane protein, 60 kDa [Neorickettsia sennetsu str. Miyayama] Length = 566 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 180/569 (31%), Positives = 302/569 (53%), Gaps = 22/569 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M++ +N F+A LS +++ W + P E +E + ++VK ++++ + Sbjct: 1 MQQTYNVFIATLLSFLVIIGWNLVFYNPTQRESFHEVQKKESVKVYESLESTLS------ 54 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + R+++ + L GSI L G DDL L+ Y D + LL P+ TK AY Sbjct: 55 -------TERIKISSSKLEGSIQLTGLALDDLILKDYKSDDLKDQ--YRLLYPNKTKGAY 105 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 F + + S+ ++LTP +P+ + N +LF+ +S+D++Y+F Sbjct: 106 FINPGWTIPGDPGLRTPSSKTKWQADSELLTPGSPVTFSWDNGFGLLFKVVVSIDDNYMF 165 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK----SLVEQKYSD 236 V N S + + I + P+T + + EG + V+ D+ + + Sbjct: 166 TFKQIVENKSQNDLSVGSHFTITKSLPETNKSMLIMHEGPVGVVKDQLMELKYSKIAKKN 225 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + + W G SDKYW I + ++ D + N I Sbjct: 226 KSIAFDEDTQNQRGWFGFSDKYWFVSQIFENSSDGKVYISHIDDKSDDIFRITNFNAQKI 285 Query: 297 LPGKSITT-TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G + LFAG K+ + Y +++ I F+ +D+G YFI KP+ L+ F++ Sbjct: 286 VRGGGLIVKETMLFAGPKKLSLLEEYAQNMRIYLFDRAVDFGVLYFITKPISKLLQVFHH 345 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 LVGNFG+AI+L T F+++L PL+ K +S +K +QP+I +++ ++ L +A Sbjct: 346 LVGNFGVAIILLTFFIRVLMLPLSIKSGISMFKIKELQPEILKIKSMYQNDKD-ALNRAS 404 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++L++ H + P++GC P LLQ+PVFFA+YKVI I++EMR APF+ WI DL+ DPTN+FT Sbjct: 405 VELFRKHRVTPMSGCLPTLLQVPVFFALYKVIFITVEMRQAPFFLWISDLSLPDPTNLFT 464 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK-GQAMILNWMPVVFVFALSSF 534 LFG++ + P F+ +GI PII+ L+M IQ K+SP D QA ++ MP VF+ +SF Sbjct: 465 LFGLIDWNCPDFLSIGILPIILGLTMVIQQKLSPSHYDDGTQAFMIKAMPYVFMILFASF 524 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+GL++YW ++NV+S++QQ VI K + Sbjct: 525 PSGLVLYWVFNNVLSLLQQFVIGKYLFTK 553 >gi|148361343|ref|YP_001252550.1| preprotein translocase subunit YidC [Legionella pneumophila str. Corby] gi|296108684|ref|YP_003620385.1| preprotein translocase YidC subunit [Legionella pneumophila 2300/99 Alcoy] gi|166975873|sp|A5IIK4|OXAA_LEGPC RecName: Full=Inner membrane protein oxaA gi|148283116|gb|ABQ57204.1| Preprotein translocase subunit YidC [Legionella pneumophila str. Corby] gi|295650586|gb|ADG26433.1| preprotein translocase YidC subunit [Legionella pneumophila 2300/99 Alcoy] Length = 556 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 140/580 (24%), Positives = 255/580 (43%), Gaps = 42/580 (7%) Query: 1 MERNWNYFVAIALSVI---IVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ--VDNSYAA 55 M+ + +AL++I + AWQ Y + E + Q N+ Sbjct: 1 MDI-RRIVLYMALALIGLSLWNAWQIDYPAAQPVEDKTASQLTSDGHLLPQIIPSNAEQP 59 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 V + +A S +++K L I+LK L Y L V + LL Sbjct: 60 VTLKAEEKASSGKQLIQVKTDVLDVGIDLKNGDIVKGLLLDYPLSVEDKNKPFPLLQNQA 119 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFERTIS 173 ++ +V + + + ++ + L K+ + + ++ Sbjct: 120 SQRYVANSSLFVLDGQTPQSLDFDFTSEKEYYELKPDQNQLIVTLNGKSEDGLDVKKEFV 179 Query: 174 L-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA----VLGDKS 228 YL ++ + N + +++R P+ ++ + G Sbjct: 180 FTKGSYLIEVNYKIANTGNSLWKGYFNTQLLRSSPKEDKSSIFHIGSYTGASFSNPGKNR 239 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + +SD+ KS++ W+ + Y+ S ++P+ ++ Y Sbjct: 240 YQKVSFSDMSKSNLD-VDAKGGWIAMQQHYFLSAWVPNADSENKFYTLATDKD---YTIG 295 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + IT+ P + + L+ G + + P ++ +D+G +F++ +F Sbjct: 296 AVSQPITVKPKEDKIVGSKLYIGPEITSVLKGIS-----PSLDLTVDYGILWFLSSLLFS 350 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 LM Y +VGN+G +I+L TV +KL F+ L+ Y S A+M+ +QPK+ LRE++ Sbjct: 351 LMKAIYTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKA 410 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + + +A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WI DLA+A Sbjct: 411 K-ISQATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASA 469 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + + P+IM +M IQ K++P PAD QA ++ ++P++F Sbjct: 470 DPYH-------------------VLPLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFT 510 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 +FP+GL++YW +N +SI+QQ I + + E Sbjct: 511 GLFWNFPSGLVLYWIVNNTLSILQQWYITRKYSDEKPAKK 550 >gi|157373143|ref|YP_001471743.1| 60 kDa inner membrane insertion protein [Shewanella sediminis HAW-EB3] gi|189036364|sp|A8FP42|OXAA_SHESH RecName: Full=Inner membrane protein oxaA gi|157315517|gb|ABV34615.1| 60 kDa inner membrane insertion protein [Shewanella sediminis HAW-EB3] Length = 544 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 140/565 (24%), Positives = 241/565 (42%), Gaps = 38/565 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + E + + +S Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQTDQAPQPVAMESSSTIPSSSTSDSHSSDVPDADSA 59 Query: 61 -RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A ++ + + LI IN G L + L++ + P V L + Sbjct: 60 LPAAVVASKELITVNTDQLIIKINPIGGDIVYSALVEHKLELDKDEPFVLLEQTKDIN-- 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISL- 174 Y A+ + ++ S + T + L F N + + Sbjct: 118 YIAQSGLIGRNGIDSSSKGRAHFDSASREYTLASGQDTLEVPLTFVADNGATYTKMFVFH 177 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 + + + N++ Q++ G+I Q+ ++ A + E+ Sbjct: 178 RGQFKVDVDYVIDNSTDQQLQVQMYGQIKHSIKQSESSMMMPTYRGAAFSTANTRYEKYS 237 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D + W + Y+ S ++P + G A F Sbjct: 238 FDDMADKNLDEKTLGGWAAMLQHYFVSAWVPPANDQNIIFSSISAGGQAN--IGFRGAVY 295 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 + PG + T + + G K + + +++D+G+ +++A P++ L+ +F Sbjct: 296 DVAPGATQTINSEFYVGPKNQEALSAISES-----LNLVVDYGFLWWLAVPIYKLLMFFQ 350 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +LV N+G+AI+L T+ V+ + +PL K QY S A M+N+QPK+ E++E+F Q + +A Sbjct: 351 SLVTNWGLAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLAEMKERFGD-DRQKMGQA 409 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI DL+ DP Sbjct: 410 MMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQDPYY-- 467 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALS 532 + PI+M +SMF+ KM P P D Q ++ WMPVVF Sbjct: 468 -----------------VMPILMGISMFVMQKMQPMAPTMDPMQQKMMQWMPVVFTVFFL 510 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ +I Sbjct: 511 WFPAGLVLYWLVGNLVAITQQKIIY 535 >gi|262371177|ref|ZP_06064498.1| inner membrane protein oxaA [Acinetobacter johnsonii SH046] gi|262313907|gb|EEY94953.1| inner membrane protein oxaA [Acinetobacter johnsonii SH046] Length = 587 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 140/589 (23%), Positives = 242/589 (41%), Gaps = 68/589 (11%) Query: 11 IALSVIIVYAWQNFYVYPRIEEMNNERK-----------NIQTVKQPNQVDNSYAAVLID 59 ++ +++ AWQ Y + + + N QT + + + A Sbjct: 14 FVVAYLLILAWQKDYGHAETQPQPQQAAAVSHEVSADLPNAQTASAASDMPQANIATQQP 73 Query: 60 DRAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 S++ + + ++ IN KG + L + SN V L S+ K Sbjct: 74 ATEAKASVNQQLISVQTDLYHLWINPKGGDIVRIELLNHDKSKDSNEAFVML--ESDAKR 131 Query: 119 AYFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNA 163 Y A+ + + ++ GK + T ++ Sbjct: 132 TYVAQSGLIGLNGPDSNRSGRPMYEIEKSAYTLNDAKAVQTEDGKSIKVLTVPMVLKTAD 191 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEG 219 + + Y + V N S + G++ R F + Sbjct: 192 GVEIIKTFTFKQGEYPVVVNHKVVNRSGQNWQGQMFGQLKRDNSDDPGKSDQGIFTLGTF 251 Query: 220 FIAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK-------ETS 270 G + K+++ + ++ W+ + Y+ S +IP Sbjct: 252 LGGAWGSPEEHYNKLKFANFNEEKLN-VEAKGGWVAMVQHYFVSAWIPGDLKLTQANGQP 310 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + ++ + F++ IT+ G ++G K + Sbjct: 311 YVAKLESRKSTDDMNIIGFTSPTITVPAGTVAEIDATFYSGPKVQSELKELAT-----GL 365 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +D+GW + IAK +F+ + +F+ LVGN+G AI+L TV VKL+ +PL+ K Y S A M+ Sbjct: 366 NQTVDYGWLWPIAKLLFLGLEFFHGLVGNWGWAIILLTVLVKLILWPLSSKSYRSMAKMR 425 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 I P++ ++E+F + M+ LYK +NPLAGC P+LLQ+P+F A+Y V+ S Sbjct: 426 VIAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLAGCLPLLLQMPIFLALYWVLMES 484 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+RHAP+ WI+DL+A DP I P++M +MFIQ ++P Sbjct: 485 VELRHAPWLLWIQDLSAMDPWF-------------------ILPLLMGATMFIQQSLNPQ 525 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 PAD QA + MP+VF + FPAGL++YW +N I+I+QQ +I K Sbjct: 526 PADPMQAKVFKIMPIVFTVFMLFFPAGLVLYWIVNNSITIIQQTLINKS 574 >gi|161610372|ref|NP_886531.2| putative inner membrane protein translocase component YidC [Bordetella parapertussis 12822] gi|38502926|sp|Q7W2K1|OXAA_BORPA RecName: Full=Inner membrane protein oxaA Length = 563 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 151/581 (25%), Positives = 250/581 (43%), Gaps = 53/581 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51 M+ + + S ++ W N+ + P E ++ Sbjct: 1 MDI-RRTVLWMIFSFSLLLLWNNWQIHNGKPSLFGGPAPEAAATQQPKADANGTAASSTA 59 Query: 52 SYAAVLIDDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 S + A A +V + L + + GAQ L Y Sbjct: 60 SIPSSPAAAPAAASVPGAAAPAAAKSEQVVITTDVLRLTFDSNGAQLIRAELLKYPSSSQ 119 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVF 160 S+ P V + + Y A+ V P T ++L+S + T + Sbjct: 120 SDKPTVLM--DRSADLVYVAQTGVVGAPQGESFPTHQTPFHLVSSERSLTGDTLDVVFEA 177 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQE 218 ++ + + Y + + N + + ++ R P ++ + Sbjct: 178 ESGGLKVTKTYTLHRGRYDVDVRHAMANTGGAPLSPALYLQLERDGTDPAGTSSFYHTFT 237 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKY 277 G + +SDIEK + + N W+GI Y+A+ +IP++ ++ Sbjct: 238 GVAVYSEQDKFQKVTFSDIEKKKGTYIKQADNGWIGIVQHYFATAWIPAQGKQRTNEL-- 295 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 L Y A+ TI PG S L+ G ++ + P E+++D+G Sbjct: 296 LQVQQNLYAARTIEAVGTIAPGSSANVDAHLWVGPQDQKAMAAVA-----PGLELVVDYG 350 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W IAKP+F LM++ + L+GN+G I+ TV +K +FFPLA Y S A MK + P++ Sbjct: 351 WLTIIAKPLFTLMTWLHGLLGNWGWTIVALTVIIKAVFFPLAAASYRSMARMKQVAPRLQ 410 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L+EK+ Q L +AM+++Y+T INPL GC P+++QIPVF A+Y V+ S+EMR AP Sbjct: 411 ALKEKYGD-DRQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAP 469 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W+ DL+ DP I P IM +MF+Q+K++P P D QA Sbjct: 470 WILWVHDLSVRDPFF-------------------ILPAIMMATMFLQIKLNPTPPDPVQA 510 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ MP+VF + FPAGL++YW +N +SI QQ I + Sbjct: 511 KVMMIMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWTITR 551 >gi|240949810|ref|ZP_04754139.1| putative inner membrane protein translocase component YidC [Actinobacillus minor NM305] gi|240295727|gb|EER46422.1| putative inner membrane protein translocase component YidC [Actinobacillus minor NM305] Length = 554 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 143/559 (25%), Positives = 246/559 (44%), Gaps = 50/559 (8%) Query: 21 WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIG 80 WQ + +K Q Q D A + A++ S + +++ L Sbjct: 23 WQQDFNP-----EIQAQKQAQIQAQQQSGDVPAATSQTQNVAESNSKGKTITIESDVLRL 77 Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 +++ G D +L +H ++ SN+P L N+K Y A+ + Sbjct: 78 TVDTLGGDVIDSDLLKHHAELHSNTPFELL--QDNSKVLYVAQSGLIGKNGIDTNNGRAQ 135 Query: 141 VWNLISGKILTPTT---PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFS 197 L + L F+ + + Y + + NNS + + Sbjct: 136 YQTTADSFKLAEGQNEISVPLTFEKDGVVYTKTFTLKRGSYNVGVDFNIKNNSAEVVEVQ 195 Query: 198 PRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN-----------F 245 P G++ +++ + T G + + + + ++ Sbjct: 196 PYGQLKHTLVESSGSLTMPTYTGGAYSSSETNYKKYSFQEMADEKKRKAEQGIANGGLSI 255 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 + W+ I Y+ S ++P ++ + +G A + ++ P T + Sbjct: 256 ESNTGWVAILQHYFVSAWVPQQDKPMTIYTRVSDNGVA--TIGYRGALTSVAPNSDATIS 313 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 L+ G K+ + ++ D+GW +FIAKP+F L++ LV N+G+AI+ Sbjct: 314 THLWTGPKDQKEMAETAA-----HLDLTADYGWAWFIAKPLFWLLTQIQKLVVNWGLAII 368 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 T+ VK L +PL K QY S A M+ +QP+I E+RE+F Q + + M++LYK +N Sbjct: 369 CVTIVVKTLLYPLTKAQYTSMAKMRMLQPRIQEMRERFGD-DRQRMSQEMMKLYKEEKVN 427 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 428 PMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------------- 474 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I P++M SMF+ KMSP P AD Q ++ +MPV+F FP+GL++YW Sbjct: 475 ------ILPLLMGGSMFLLQKMSPTPIADPVQQKVMTFMPVMFTVFFLWFPSGLVLYWLT 528 Query: 545 SNVISIVQQAVIMKMHGAE 563 SN I+IVQQ +I + + Sbjct: 529 SNCITIVQQWLIYRQLEKK 547 >gi|33591704|ref|NP_879348.1| putative inner membrane protein translocase component YidC [Bordetella pertussis Tohama I] gi|161609254|ref|NP_891527.2| putative inner membrane protein translocase component YidC [Bordetella bronchiseptica RB50] gi|54038802|sp|P65623|OXAA_BORBR RecName: Full=Inner membrane protein oxaA gi|54041691|sp|P65622|OXAA_BORPE RecName: Full=Inner membrane protein oxaA gi|33571347|emb|CAE44824.1| probable inner-membrane protein [Bordetella pertussis Tohama I] gi|332381123|gb|AEE65970.1| putative inner membrane protein translocase component YidC [Bordetella pertussis CS] Length = 563 Score = 335 bits (857), Expect = 2e-89, Method: Composition-based stats. Identities = 151/581 (25%), Positives = 250/581 (43%), Gaps = 53/581 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51 M+ + + S ++ W N+ + P E ++ Sbjct: 1 MDI-RRTVLWMIFSFSLLLLWNNWQIHNGKPSLFGGPAPEAAATQQPKADANGTAASSTA 59 Query: 52 SYAAVLIDDRAQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 S + A A +V + L + + GAQ L Y Sbjct: 60 SIPSSPAAAPAAASVPGAAAPAAAKSEQVVITTDVLRLTFDSNGAQLIRAELLKYPSSSQ 119 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVF 160 S+ P V + + Y A+ V P T ++L+S + T + Sbjct: 120 SDKPTVLM--DRSADLVYVAQTGVVGAPQGESFPTHQTPFHLVSSERSLTGDTLDVVFEA 177 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQE 218 ++ + + Y + + N + + ++ R P ++ + Sbjct: 178 ESGGLKVTKTYTLHRGRYDVDVRHAMANTGGAPLNPALYLQLERDGTDPAGTSSFYHTFT 237 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKY 277 G + +SDIEK + + N W+GI Y+A+ +IP++ ++ Sbjct: 238 GVAVYSEQDKFQKVTFSDIEKKKGTYIKQADNGWIGIVQHYFATAWIPAQGKQRTNEL-- 295 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 L Y A+ TI PG S L+ G ++ + P E+++D+G Sbjct: 296 LQVQQNLYAARTIEAVGTIAPGSSANVDAHLWVGPQDQKAMAAVA-----PGLELVVDYG 350 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W IAKP+F LM++ + L+GN+G I+ TV +K +FFPLA Y S A MK + P++ Sbjct: 351 WLTIIAKPLFTLMTWLHGLLGNWGWTIVALTVIIKAVFFPLAAASYRSMARMKQVAPRLQ 410 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L+EK+ Q L +AM+++Y+T INPL GC P+++QIPVF A+Y V+ S+EMR AP Sbjct: 411 ALKEKYGD-DRQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAP 469 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W+ DL+ DP I P IM +MF+Q+K++P P D QA Sbjct: 470 WILWVHDLSVRDPFF-------------------ILPAIMMATMFLQIKLNPTPPDPVQA 510 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ MP+VF + FPAGL++YW +N +SI QQ I + Sbjct: 511 KVMMIMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWTITR 551 >gi|330861750|emb|CBX71924.1| inner membrane protein oxaA [Yersinia enterocolitica W22703] Length = 548 Score = 335 bits (857), Expect = 2e-89, Method: Composition-based stats. Identities = 137/571 (23%), Positives = 241/571 (42%), Gaps = 52/571 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + V + + ++ + Sbjct: 1 MDSQRNLLL-IALLFVSFMIWQAWQVDNNPQPAAQTTQQTANTATGDKASQAVPGS---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L +IN +G + NL Y + S+ L + Y Sbjct: 56 -----GQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ + N + I L F + +F +T L Sbjct: 109 QAQSGLTGKSGPDNPANGERPLFEVPQTSFVLADGQDELRIPLTFTGKDGSVFTKTFVLK 168 Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 + + V N S + + G++ + T +N F + A Sbjct: 169 RNDYAIGVDYHVKNASAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDET 228 Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 +KY + + W+ + +Y+A+ +IP+ + F G+ Sbjct: 229 KYKKYSFSDIEDKSLDITTKGGWVAMLQQYFATAWIPAANE--TNTFYSADLGNGLAAIG 286 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F + I PG+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 FKGAPVVIQPGEQKQLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFK 341 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 342 LLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK- 400 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 401 QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQ 460 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M ++M+ KMSP D Q I+ +MPV+F Sbjct: 461 DPYY-------------------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIF 501 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++Y+ SN+++I+QQ +I + Sbjct: 502 TVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 532 >gi|238899054|ref|YP_002924736.1| protein involved in protein translocation and folding, substrates includes ATP synthase, SecYEG, LacY [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466814|gb|ACQ68588.1| protein involved in protein translocation and folding, substrates includes ATP synthase, SecYEG, LacY [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 547 Score = 335 bits (857), Expect = 2e-89, Method: Composition-based stats. Identities = 140/571 (24%), Positives = 254/571 (44%), Gaps = 51/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IA + WQ + V + V N + S L + Sbjct: 1 MDSQRNLLL-IAFFFVSFMIWQTWQVDHNP--LKAVENGTALVTNNNGTETSTLVPLSN- 56 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + ++ + L +I+ +G NL Y + S L S Y Sbjct: 57 -----TQGQKITVTTDVLSLTIDTQGGDIQQANLLAYPDTLGSKKSFQLL--ESTPDFVY 109 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + I L F + N ++ +T L Sbjct: 110 EAQSGLTGKNGPDNPLNGHRPVYSVKQPHFVLPEGQNELQIPLTFTDKNGLVLTKTFILK 169 Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMR------HKPQTATNTFGVQEGFIAVLGDKS 228 + +++ + N S + F+ G++ + H+ ++N A + Sbjct: 170 RNDYAIRVLYRINNASSTPLEFNFFGQLKQSTQLPKHRDTASSNFALHTYRGAAYSSKED 229 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 ++ + + N W+ + +Y+A+ +IP+ + ++L GH + Sbjct: 230 KYKKYSFSDIEDANLNITTQGGWVAMLQQYFATAWIPNAGETHDFYSRHL--GHGLVASG 287 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F + + + PG+ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 288 FKSLPVLVNPGEQKELSATLWVGPELQDKMAVIA-----PHLDLTVDYGWLWFISQPLFK 342 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + + VGN+G++I+L T V+ + +PL K QY S A M+ +QPK+ E+RE+ Sbjct: 343 LLKFIHGFVGNWGLSIILITFIVRGIMYPLTKAQYTSMAKMRMLQPKLTEMRERIGD-DR 401 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 QRMSQEMMALYKSEKVNPLGGCLPLIIQMPIFLALYYMLMGSVELRHAPFILWIHDLSAQ 461 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M L+M+ KMSP D Q I+N+MPV+F Sbjct: 462 DPYY-------------------ILPILMGLTMYFIQKMSPSTITDPMQKKIMNFMPVIF 502 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 503 TVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|16762484|ref|NP_458101.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143972|ref|NP_807314.1| inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052693|ref|ZP_03345571.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213424948|ref|ZP_03357698.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|38503116|sp|Q8Z2N7|OXAA_SALTI RecName: Full=Inner membrane protein oxaA gi|25299103|pir||AF0957 probable membrane protein STY3938 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504789|emb|CAD03154.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139608|gb|AAO71174.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 548 Score = 335 bits (857), Expect = 2e-89, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|193069129|ref|ZP_03050086.1| inner membrane protein OxaA [Escherichia coli E110019] gi|192957453|gb|EDV87899.1| inner membrane protein OxaA [Escherichia coli E110019] Length = 548 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 141/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ V+Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQVQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|320354720|ref|YP_004196059.1| protein translocase subunit YidC [Desulfobulbus propionicus DSM 2032] gi|320123222|gb|ADW18768.1| protein translocase subunit yidC [Desulfobulbus propionicus DSM 2032] Length = 549 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 148/563 (26%), Positives = 258/563 (45%), Gaps = 24/563 (4%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ------VDNSYAAVLID 59 F+AI LS +I+ +Q F+V P + + Q NQ + Sbjct: 5 RAFLAIVLSFLILIGYQYFFVKPVPPQPQAPGQATQAASSANQQTAGGAPAAATGIAATP 64 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 ++ V + P IN +G L+ Y + ++ + L+ +A Sbjct: 65 STVAVDPLAHDVTVDTPLYTAVINEQGGGVKGFVLKSYRSTNAEDAGPMQLIIGKGPADA 124 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 + ++ ++ + T T + + + YL Sbjct: 125 PVLFSLDNGAGTVLPTYTADKNAVTLTNQGDTGTLTMT-AALADGIAIVRTLTFRGDSYL 183 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + V+N + ++ SP ++ A+ T A ++ LVE K + + Sbjct: 184 INVEYKVSNTTDRPVQVSPALTMVNEPFAHASETSKYLFAGPAAYVNEKLVETKAKKLTE 243 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + + SW G D Y+ + P+ + + S TI P Sbjct: 244 APVVL-QGKVSWTGYVDNYFMTTVAPAVGNGRTITL---QGSEQQVRTVLSEGIQTIGPH 299 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + + L+ G K+ + D +D+GWF +AKPM L+++F+ N Sbjct: 300 EGKSFAYTLYFGPKKLQVLQTAGSD-----LAKAVDFGWFDVLAKPMLWLLNFFHQFSHN 354 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G+AI+L T+ +KL+F+P+ +K S NM+ +QPKI +LRE+FK P ++ + M+ LY Sbjct: 355 YGVAIILLTILIKLIFWPITQKGMKSMKNMQKLQPKIAKLRERFKDDPAKM-NQEMMTLY 413 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 KT+ +NP+ GC P+L+QIP FFA+Y+V+ ++E+RHAPF WI DL+A D I Sbjct: 414 KTYKVNPVGGCLPMLIQIPFFFALYRVLMAAIELRHAPFMLWINDLSAPDRLWIG----- 468 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 F +P + I ++M SM++Q KM+P AD QA I+ ++P+VF F +F +GL+ Sbjct: 469 --FDIPYLHGIPILTLLMGASMYLQQKMTPTTADPTQARIMQFLPIVFTFMFINFASGLV 526 Query: 540 IYWSWSNVISIVQQAVIMKMHGA 562 +YW +N++SI+QQ +I + + A Sbjct: 527 LYWFVNNLLSILQQYLINRQNKA 549 >gi|319765065|ref|YP_004129002.1| membrane protein insertase, yidc/oxa1 family domain containing [Alicycliphilus denitrificans BC] gi|330827257|ref|YP_004390560.1| membrane protein insertase, YidC/Oxa1 family domain-containing [Alicycliphilus denitrificans K601] gi|317119626|gb|ADV02115.1| membrane protein insertase, YidC/Oxa1 family domain containing [Alicycliphilus denitrificans BC] gi|329312629|gb|AEB87044.1| membrane protein insertase, YidC/Oxa1 family domain containing [Alicycliphilus denitrificans K601] Length = 564 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 135/587 (22%), Positives = 231/587 (39%), Gaps = 50/587 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNERKNIQT-------V 43 M + + +V W F+ P + + V Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQIHNGNKATFFPTPPAQTASAPAVAASAAGAASVPV 60 Query: 44 KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 + A + RV + L + + G L Y Sbjct: 61 ASSAAPGAAAQPPAGSPVQPAATPRERVTVSTDVLRLAFDTDGGSLVQGELLKYPEMGDK 120 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN- 162 P LL + Y A+ + A V K ++ + Sbjct: 121 AKPF--LLLDESADRVYVAQTGLIGGAFPTHKTPMALVPGPRELKDGENELQVRFESPDL 178 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGF 220 L + + Y + V N + +++R P ++ + G Sbjct: 179 GGVKLVKTWMLKRGAYDIAVRHEVVNTGTAPVSPQLYLQLVRDGNKPAGESSFYSTFTGP 238 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 K + ++ DIE S N ++ + Y+A+ ++ + + + + Sbjct: 239 AVYTEAKKYHKVEFKDIESGKAEIDKSSTNGYVAMVQHYFATAWLLADGVQRDNFVRKVD 298 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 Y A I PG+S + LFAG + + P E++ D+GW Sbjct: 299 AN--LYSVGMIAQLGEIAPGQSKSMDARLFAGPQIETLLEKLA-----PGLELVKDYGWL 351 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +AKP++ L+ + ++ N+G +I+ V +K+ F+ L K Y S A MK I P+I E+ Sbjct: 352 TILAKPLYWLLDQLHKVIANWGWSIVALVVLLKIAFYWLNAKAYASMAKMKAINPRIQEM 411 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+ K PQ +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+EMR AP+ Sbjct: 412 RERLKD-KPQQMQQEMMRIYREEKVNPMGGCLPIMIQIPVFIALYWVLLSSVEMRGAPWI 470 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 GWI DL++ DP I P++M+ S +Q ++P P D QA + Sbjct: 471 GWIHDLSSPDPFF-------------------ILPLLMTASSLLQTALNPAPPDPMQAKM 511 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + MP++F FPAGL++YW +N++SI QQ +I K G Sbjct: 512 MWLMPLMFSVMFFFFPAGLVLYWLTNNILSIAQQWIINKRMGVPPQF 558 >gi|123444346|ref|YP_001008311.1| putative inner membrane protein translocase component YidC [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122091307|emb|CAL14193.1| probable membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 548 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 136/571 (23%), Positives = 241/571 (42%), Gaps = 52/571 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + V + + ++ + Sbjct: 1 MDSQRNLLL-IALLFVSFMIWQAWQVDNNPQPAAQTTQQTANTATGDKASQAVPGS---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L +IN +G + NL Y + S+ L + Y Sbjct: 56 -----GQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ + N + I L F + +F +T L Sbjct: 109 QAQSGLTGKSGPDNPANGERPLFEVPQTSFVLADGQDELRIPLTFTGKDGSVFTKTFVLK 168 Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 + + + N S + + G++ + T +N F + A Sbjct: 169 RNDYAIGVDYHIKNASAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDET 228 Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 +KY + + W+ + +Y+A+ +IP+ + F G+ Sbjct: 229 KYKKYSFSDIEDKSLDITTKGGWVAMLQQYFATAWIPAANE--TNTFYSADLGNGLAAIG 286 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F + I PG+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 FKGAPVVIQPGEQKQLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFK 341 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 342 LLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK- 400 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 401 QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQ 460 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M ++M+ KMSP D Q I+ +MPV+F Sbjct: 461 DPYY-------------------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIF 501 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++Y+ SN+++I+QQ +I + Sbjct: 502 TVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 532 >gi|54295839|ref|YP_128254.1| hypothetical protein lpl2930 [Legionella pneumophila str. Lens] gi|81679103|sp|Q5WSE9|OXAA_LEGPL RecName: Full=Inner membrane protein oxaA gi|53755671|emb|CAH17174.1| hypothetical protein lpl2930 [Legionella pneumophila str. Lens] Length = 556 Score = 334 bits (855), Expect = 3e-89, Method: Composition-based stats. Identities = 136/579 (23%), Positives = 253/579 (43%), Gaps = 41/579 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-----PNQVDNSYAAV 56 + +AL++I + W + + ++ E+ Q N+ V Sbjct: 1 MDIRRIVLYMALALIGLSLWNAWQIDYPAKQPVEEKTASQLTSDGHLLPQIIPSNAEQPV 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + +A S +++K L I+LK L Y L V + LL + Sbjct: 61 TLKAEEKASSGKQLIQVKTDILDVDIDLKNGDIVKGLLLDYPLSVEDKNKPFPLLQNQAS 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP--IKLVFKNANNILFERTISL 174 + +V + + + ++ + L K+ + + ++ Sbjct: 121 QRYVANSSLFVLDGQTPQSLDFDFTSEKEYYELKPDQNQLIVTLNGKSEDGLDVKKEFVF 180 Query: 175 -DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA----VLGDKSL 229 YL ++ + N + +++R P+ ++ + G Sbjct: 181 TKGSYLIEVNYKIANIGNSLWKGYFNTQLLRSSPKEDKSSIFHIGSYTGASFSNPGKNRY 240 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + +SD+ KS++ W+ + Y+ S ++P+ ++ Y Sbjct: 241 QKVSFSDMSKSNLD-VDAKGGWIAMQQHYFLSAWVPNADSENKFYTLATDKD---YTIGA 296 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + IT+ P + + L+ G + + P ++ +D+G +F++ +F L Sbjct: 297 VSQPITVKPKEDKIVGSKLYIGPEITSVLKGIS-----PSLDLTVDYGILWFLSSLLFSL 351 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M Y +VGN+G +I+L TV +KL F+ L+ Y S A+M+ +QPK+ LRE++ + Sbjct: 352 MKAIYTVVGNWGWSIVLVTVLIKLAFYRLSATSYKSMASMRKLQPKLQALRERYGDDKAK 411 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +A ++LYK +NPL GC PIL+QIPVF A+Y V+ S+E+R APF WI DLA+AD Sbjct: 412 -ISQATMELYKQEKVNPLGGCLPILIQIPVFIALYWVLLESVELRQAPFIFWINDLASAD 470 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P + + P+IM +M IQ K++P PAD QA ++ ++P++F Sbjct: 471 PYH-------------------VLPLIMGATMLIQQKLNPAPADPMQAKVMMFLPILFTG 511 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 +FP+GL++YW +N +SI+QQ I + + E Sbjct: 512 LFWNFPSGLVLYWIVNNTLSILQQWYITRKYSDEKPAKK 550 >gi|253702733|ref|YP_003023922.1| hypothetical protein GM21_4149 [Geobacter sp. M21] gi|259515695|sp|C6DYS1|OXAA_GEOSM RecName: Full=Inner membrane protein oxaA gi|251777583|gb|ACT20164.1| 60 kDa inner membrane insertion protein [Geobacter sp. M21] Length = 536 Score = 334 bits (855), Expect = 3e-89, Method: Composition-based stats. Identities = 143/567 (25%), Positives = 243/567 (42%), Gaps = 43/567 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME +A+ LS+ ++YA+ + P+ ++ + + + Sbjct: 1 ME--KRLIIAVVLSIGVLYAYSFIFPTPKPVPTPGGKQAAMSSATAPAPSVAALPIAGTT 58 Query: 61 RAQALSM--------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A + + V + + +G L+ Y + L++ Sbjct: 59 PVAAPAPQAGQAPAVAKDVTVDTDLYTAVFSTQGGGLKKFVLKKYKETAGPQGKDIVLVN 118 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 N Y D + S + ++L + I F + Sbjct: 119 -ETAANRYALLSDSREFGISPNALYSAS--TGEVKVTDGGKGSLELTTTTSQGITFRKVY 175 Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 + + Y + + V N + + + K V+ Sbjct: 176 TFSGDAYRIGLTEEVQNVGNVALTGAVHLLQTSRVVDAKKEGRYEVYSPSTLAEGK--VK 233 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + + + + + +W +DKY+ I K + SQ + + ++ Sbjct: 234 LDDLEDLQKTPVQYGKDIAWSAFADKYFVDGIIADKGS--ISQVRITRPANDAILRDVAS 291 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 +++ PG+ ++ G K+ + RFE +ID+GWF IAKP+ + Sbjct: 292 PTVSVAPGQRSAINYAIYYGPKDLDILKLQGS-----RFEEVIDYGWFGPIAKPLIYSLK 346 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + Y GN+GIAI++ T +KL+FFPL K Y S +M+ +QPK+ EL+EKFK + Sbjct: 347 FLYKYTGNYGIAIIIITFILKLVFFPLTHKSYKSMKDMQKLQPKMTELKEKFKNDRD-AM 405 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +A+++LYKTH +NPL GC P+L+QIPVFF +Y+ + S+E+RHAPF+ WI DL+A DP Sbjct: 406 NRAVMELYKTHKVNPLGGCLPMLVQIPVFFGLYRALMYSIELRHAPFYLWITDLSAKDPY 465 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 + PIIM +MFIQ KM+P D QA ++ +P+VF F Sbjct: 466 Y-------------------VTPIIMGATMFIQQKMTPTNMDPVQAKMMLMLPIVFTFMF 506 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 +FP+GL+IYW +NV++I QQ I K Sbjct: 507 LNFPSGLVIYWLVNNVLTIAQQMYINK 533 >gi|170729247|ref|YP_001763273.1| 60 kDa inner membrane insertion protein [Shewanella woodyi ATCC 51908] gi|254778163|sp|B1KQ65|OXAA_SHEWM RecName: Full=Inner membrane protein oxaA gi|169814594|gb|ACA89178.1| 60 kDa inner membrane insertion protein [Shewanella woodyi ATCC 51908] Length = 544 Score = 333 bits (854), Expect = 4e-89, Method: Composition-based stats. Identities = 139/565 (24%), Positives = 243/565 (43%), Gaps = 38/565 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N + I L + WQ + + + + ++ T + +S Sbjct: 1 MESQRN-ILLIGLLFVSFLLWQQWQTDQAPQPVATQSSSVVTASSASDSHSSDVPDADSA 59 Query: 61 -RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A ++ + + LI IN G L + L++ ++ P V L ++ Sbjct: 60 LPAAVVASKDLITVNTDQLIIKINPVGGDIVYSALVEHKLELENDEPFVLLEQTNDIN-- 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLD 175 Y A+ + ++ S T + L + N + + Sbjct: 118 YIAQSGLIGRDGIDSSVKGRAHFDSASRNYSLAAGQDTLEVPLTYVAENGATYTKMFIFH 177 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 + + + N + Q++ G+I ++ ++ A + E+ Sbjct: 178 RGKFDVDVDYVIDNKTDKQLQVQMYGQIKHSIKKSESSMMMPTYRGAAFSTQDTRYEKYS 237 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 + + W + Y+ S ++P + G A F Sbjct: 238 FEDMADKNLDKKTLGGWAAMLQHYFVSAWVPPANDQNIIFSSISAGGQAN--IGFRGAIF 295 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 + PG + T+ + G K+ + P +++D+G+ +++A P++ L+ +F Sbjct: 296 DVAPGATQEITSQFYVGPKDQAALSAIS-----PTLNLVVDYGFLWWLAVPIYKLLMFFQ 350 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++VGN+G AI+L T+ V+ L +PL K QY S A M+N+QPK+ E++E+F Q + +A Sbjct: 351 SIVGNWGAAIILITLTVRGLLYPLTKAQYTSMAKMRNLQPKLAEMKERFGD-DRQKMGQA 409 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI DL+ DP Sbjct: 410 MMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWITDLSVQDPYY-- 467 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALS 532 + PI+M +SMF+ KM P P D Q ++ WMPVVF Sbjct: 468 -----------------VMPILMGVSMFVMQKMQPMAPTMDPMQVKMMQWMPVVFTVFFL 510 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIM 557 FPAGL++YW N+++I QQ I Sbjct: 511 WFPAGLVLYWLVGNLVAIAQQKYIY 535 >gi|117927031|ref|YP_867648.1| protein translocase subunit yidC [Magnetococcus sp. MC-1] gi|166975874|sp|A0LE49|OXAA_MAGSM RecName: Full=Inner membrane protein oxaA gi|117610787|gb|ABK46242.1| protein translocase subunit yidC [Magnetococcus sp. MC-1] Length = 556 Score = 333 bits (854), Expect = 4e-89, Method: Composition-based stats. Identities = 176/587 (29%), Positives = 282/587 (48%), Gaps = 55/587 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV--YPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ AI LS +++ A+Q + YP E + ++ ++ + A + Sbjct: 1 MD--RRTLTAIVLSFVLLTAFQFYMAWKYPPAELTGEQVQSGESSAPAPLASTAPVADAL 58 Query: 59 DDRAQALSMSP----------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + ++ S + KN + GS++L+G + ++ + + Sbjct: 59 PPPVEGMAGSAPQQAMSQPLINTDAKSLLHFKNDLVEGSLSLQGGRLVGMDFLQHTDVLG 118 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 ++ + S ++ Y + I+ P++NT W LI + L KLV+ N Sbjct: 119 G--KPISFMGISQVESFYQESGFLPVAGSAIKAPDANTQWQLIGKESLQGAGEFKLVWDN 176 Query: 163 ANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 I+FE+ S YLFK+ D + NNS + + R + + + + Sbjct: 177 GEGIVFEKLFSFAQGSYLFKVEDRLINNSAAALGVYHYSQFKRIPVINSQSMLAMSDFQG 236 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI----PSKETSFHSQFKY 277 + Q + + W G SDKY+ + + P + F Y Sbjct: 237 PMAYLNGERYQHSYEDLTAQDLREKGHGGWTGFSDKYFLAAMVAKPLPPEAQPRRYYFDY 296 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 Y+ N + I G+S+ LF G KE T+ E ID+G Sbjct: 297 DRPN---YRVGMVENSVIIPAGQSLAVDYDLFIGPKEISTLERSNLS-----LERSIDYG 348 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 WF+F+A+P+ ++++F ++V N+G+AI+L T+ +KLLFFPLA K Y S MK +QPKI+ Sbjct: 349 WFHFLAEPLVKVLNFFNSVVHNYGVAIILLTLAIKLLFFPLANKSYRSMNAMKKLQPKIE 408 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 EL+ K S + +AM++LY+TH +NPL GC PIL+QIPVFFA+YKV+ +S+EMRHAP Sbjct: 409 ELK-KLHGSDRNKMNEAMMKLYQTHKVNPLGGCLPILVQIPVFFALYKVLFLSVEMRHAP 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F WI DL+A DP + P++M SMF+Q K++P P+D QA Sbjct: 468 FMLWIPDLSAMDPFY-------------------VLPLLMGGSMFLQSKLNPTPSDPMQA 508 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 I+ ++PV+F SFP+GL++YW +NV+SI QQ IMK E Sbjct: 509 KIMMFLPVIFTVMFLSFPSGLVLYWLVNNVLSISQQYYIMKKMEHEP 555 >gi|300692995|ref|YP_003753990.1| cytoplasmic insertase, essential for proper integration of ATPase into the membrane [Ralstonia solanacearum PSI07] gi|299080055|emb|CBJ52730.1| cytoplasmic insertase, essential for proper integration of ATPase into the membrane [Ralstonia solanacearum PSI07] Length = 554 Score = 333 bits (854), Expect = 4e-89, Method: Composition-based stats. Identities = 153/578 (26%), Positives = 247/578 (42%), Gaps = 50/578 (8%) Query: 1 MERNWNYFVAIALSVIIVYA---WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVD 50 M+ + + S+ +V WQ F+ P+ + + Sbjct: 1 MDI-KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTATTSAAAPGGTPAGDVPKSA 59 Query: 51 NSYAAVLIDD-----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + AA A + ++ + + +++ GA L L + Sbjct: 60 AAPAAAGSQAAPATGAASQTPAAEKIVVTTDVIRATVDTAGAILTKLELLTQK---DHDG 116 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 V L + + Y A + + T + L Sbjct: 117 NPVVLF-DRSLERTYLARSGLIG-GDFPNHTTVFTASAGPRDLGTGGEVSLTLTADKGGA 174 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVL 224 L + + Y+ VTN+ I + + R + + G Sbjct: 175 KLAKTYVFKRGSYVIDTRFDVTNDGTAPISPTLYMELARDGGSVEQSRFYSTFTGPAVYT 234 Query: 225 GDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + +SDI+K N W+G+ Y+AS +IP+ +F Sbjct: 235 DADKFHKINFSDIDKGKAHVPAATDNGWVGMVQHYFASAWIPAASA--KREFYVDRVDTN 292 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ T+ PG +I+ T LFAG +E + P E++ D+GW IA Sbjct: 293 FYRIGIQEPLGTVAPGANISATARLFAGPQEERMLEGIT-----PGLELVKDYGWLTIIA 347 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ + L+GN+G +I+ TV VKL+FFPL+ Y S A MK++QP++ +RE+ Sbjct: 348 KPLFWLLEKIHLLLGNWGWSIVGLTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERH 407 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K PQ + + M+QLY+T +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ GW+ Sbjct: 408 KG-DPQKMNQEMMQLYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWVH 466 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DLA+ DP I PI+M++SMF+Q +++P P D QA ++ +M Sbjct: 467 DLASPDPFY-------------------ILPILMAVSMFVQTRLNPTPPDPVQAKMMMFM 507 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P+ F FPAGL++YW +N +SI QQ I +M G Sbjct: 508 PIAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 545 >gi|307253082|ref|ZP_07534965.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307264104|ref|ZP_07545701.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306859451|gb|EFM91481.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306870582|gb|EFN02329.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 533 Score = 333 bits (853), Expect = 5e-89, Method: Composition-based stats. Identities = 138/554 (24%), Positives = 252/554 (45%), Gaps = 32/554 (5%) Query: 11 IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPR 70 + +S +I WQ + E ++ Q D A+ A+ + Sbjct: 4 LLVSFLIFTQWQQDFNP---EIQAQKQAQQQAQVASQSGDVPAASNANTVIAENATQGKT 60 Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 V L++ L +I+ G +L ++ +++S +P L + + T A + Sbjct: 61 VTLESDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATTYVAQSGLVGKNGID 120 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190 N P + + + F+ + + + Y + V N + Sbjct: 121 TNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFVLKRGSYDVAVNFNVKNQT 180 Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250 + P G+I +++ + A ++ ++ + + + + Sbjct: 181 AATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDMEKANLDINTKAG 240 Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W+ + Y+ S ++P+++ + + + TI P T T+ L+ Sbjct: 241 WVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGPVTTIAPNSEATITSQLWT 297 Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 G K+ + + ++ +D+GW +FIAKP+F L+++ ++V N+G+AI+ T+ Sbjct: 298 GPKDQKEMEATAAN-----LDLTVDYGWAWFIAKPLFALLTFIQSIVTNWGLAIIGVTIV 352 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 VK + +PL K QY S A M+ +QPKI E+RE+F Q + + M++LYK +NP+ GC Sbjct: 353 VKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMSQEMMKLYKEEKVNPMGGC 411 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 412 LPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------------------ 453 Query: 491 GIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 I P++M SMF+ KMSP P D Q ++ +MPV+F FP+GL++YW SN+I+ Sbjct: 454 -ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSGLVLYWLTSNIIT 512 Query: 550 IVQQAVIMKMHGAE 563 IVQQ +I + + Sbjct: 513 IVQQWLIYRNLEKK 526 >gi|186477842|ref|YP_001859312.1| putative inner membrane protein translocase component YidC [Burkholderia phymatum STM815] gi|254772761|sp|B2JJR8|OXAA_BURP8 RecName: Full=Inner membrane protein oxaA gi|184194301|gb|ACC72266.1| 60 kDa inner membrane insertion protein [Burkholderia phymatum STM815] Length = 550 Score = 333 bits (853), Expect = 5e-89, Method: Composition-based stats. Identities = 144/577 (24%), Positives = 235/577 (40%), Gaps = 41/577 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV-- 56 M+ I ++ WQ + P + + + P + Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATQTKTAAPAAPGSSTTASQPTDL 60 Query: 57 ------LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 A + V G I+ +G L L + V Sbjct: 61 PQTTAAAPGSTTPAAQQAQLVSFSTDVYRGQIDTRGGTLSKLTLVKPGEGKQPDQ--VIT 118 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 L + Y A + V + T + + + Sbjct: 119 LFDHTADHTYLARTGLLGGDFPNHTDVFTPVAGQATDMTGNTLTLSFQSPEKGGLKVVKT 178 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSL 229 Y+ + + N ++ + ++R T F G Sbjct: 179 YTFTRGSYVINVDTKIQNVGTAPVKPTAYMELVRDSQPVETPRFSHTFIGPAVYTEQHHF 238 Query: 230 VEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + DI+K+ N W+ + Y+AS +IP + + + Y+ Sbjct: 239 QKLTFGDIDKNKQDYATSADNGWVAMVQHYFASAWIPQQGAKRDIYVEKIDPS--LYRVG 296 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 TI PG++I + LFAG +E + P E++ D+GW IAKP+F Sbjct: 297 VKQPLQTIAPGQTIDVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFW 351 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+F +S P Sbjct: 352 LLEKIHGYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDP 410 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ Sbjct: 411 QKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQ 470 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P++M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 471 DPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFS 511 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 FPAGL++Y+ +NV+SI QQ I +M G + Sbjct: 512 VMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGQKKK 548 >gi|157156055|ref|YP_001465190.1| putative inner membrane protein translocase component YidC [Escherichia coli E24377A] gi|166975860|sp|A7ZTR1|OXAA_ECO24 RecName: Full=Inner membrane protein oxaA gi|157078085|gb|ABV17793.1| inner membrane protein OxaA [Escherichia coli E24377A] Length = 548 Score = 333 bits (853), Expect = 5e-89, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 252/572 (44%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++++ Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSSQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|88798542|ref|ZP_01114126.1| putative inner membrane protein translocase component YidC [Reinekea sp. MED297] gi|88778642|gb|EAR09833.1| putative inner membrane protein translocase component YidC [Reinekea sp. MED297] Length = 559 Score = 333 bits (853), Expect = 5e-89, Method: Composition-based stats. Identities = 142/574 (24%), Positives = 246/574 (42%), Gaps = 44/574 (7%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMN--------NERKNIQTVKQPNQVD 50 M+ +A +S I++ W N Y N + + D Sbjct: 1 MDVRRIALIAGLAIVSYIMILQWSNDYSQTNPVNTADAVIAGDLNSDNAVASEVPTGNPD 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + A + + ++ +L I+L G L Y + + + + Sbjct: 61 VANDTQAGQAPATSQVNGDVISVRTDTLDVRISLDGGDVIYTALPEYPYSLETPNIPFRM 120 Query: 111 LSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 +NT Y A+ V + + + + L + N ++ Sbjct: 121 F-ENNTTRTYIAQSGLVGEDGIDRQSRARFSAEQSTYELGDADQLEVVLTHEADNGLVVN 179 Query: 170 RTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLG 225 + + + Y+ + +TN D +R + G++ R + P + Sbjct: 180 KVYTFNRGAYVMDVRFDLTNQGSDTLRTNLFGQLRRDRSQDPSAGSGIGMRSYLGATFST 239 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + S E+ N + W+ + Y+ S +IPS + F Y Sbjct: 240 EDSAYEKVKFGELDDGRFNGSKVGGWVAMLQHYFLSAWIPSANDNNA--FYGQKGSTGDY 297 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 F A + + PG+S++T L+ G K+ + + E +D+GW ++IA+P Sbjct: 298 YVGFQAPTVVVGPGESVSTGAQLYVGPKDQDQLDELADN-----LEKTVDYGWLWWIAQP 352 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F LM + + L+GN+G +I+L T+ VK++ +PL Y S M+ P I ELRE++ Sbjct: 353 LFWLMQFIHGLIGNWGWSIVLMTLTVKMVLYPLTASSYRSMGKMRKFAPVISELREQYGD 412 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M++LY+ +NPL GC P+L+Q+PVF A+Y V+ S+E+R +PF WI+DL Sbjct: 413 -DRQKMSQEMMKLYQKEKLNPLGGCLPMLVQMPVFIALYWVLMESVELRQSPFIFWIQDL 471 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 + DP + P++M SMF+QM+M P D Q I+ +MP Sbjct: 472 SLKDPFF-------------------VLPLLMGASMFLQMRMQQQPTMDPMQQKIMQFMP 512 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F F FPAGL +YW +NVI+IVQQ ++ K Sbjct: 513 VMFTFMFLWFPAGLTLYWFTNNVITIVQQYIVNK 546 >gi|320539850|ref|ZP_08039509.1| putative cytoplasmic insertase into membrane protein, Sec system [Serratia symbiotica str. Tucson] gi|320030036|gb|EFW12056.1| putative cytoplasmic insertase into membrane protein, Sec system [Serratia symbiotica str. Tucson] Length = 545 Score = 333 bits (853), Expect = 5e-89, Method: Composition-based stats. Identities = 137/570 (24%), Positives = 245/570 (42%), Gaps = 52/570 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + T + Q N+ A Sbjct: 1 MDSQRNLLL-IALLFVSFMIWQAW---------QADNAPQPTAQTTQQTSNATADDAARQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + L +IN +G + L Y + S+ P L + Y Sbjct: 51 DGPVSAQGKLITVNTDVLSLTINTRGGDIEQAKLLAYPETLGSSLPFQLL--ETTPSFVY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ N + T I L F + + ++ +T L Sbjct: 109 QAQSGLTGKNGPDNPANGERPLYQAAQDSYTLPEGQDELRIPLSFTSKDGTIYTKTFVLK 168 Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 ++ + + N S + + G++ + T +N F + A Sbjct: 169 RNHYAVSVDYYIDNKSTTPLELTLFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSSSED 228 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 QKY+ +K N W+ + +Y+A+ ++P+ T + F + G F Sbjct: 229 KYQKYA-FDKDEKLNVTTQGGWIAMLQQYFATAWVPA--TQGSNTFYTANPGDNLSTIGF 285 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + + + P L+ G + + ++ +D+GW +FI++P+F L Sbjct: 286 KSTPVVVQPSTQQQLNATLWVGPELQDQMAQLAA-----HLDLTVDYGWLWFISQPLFKL 340 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q Sbjct: 341 LKFIHGFIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKMQAMRERIGDDK-Q 399 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A D Sbjct: 400 RMSQEMMALYKSEKVNPLGGCLPLIVQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQD 459 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 460 PYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFT 500 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 VFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 530 >gi|16131573|ref|NP_418161.1| membrane protein insertase [Escherichia coli str. K-12 substr. MG1655] gi|89110307|ref|AP_004087.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli str. K-12 substr. W3110] gi|170083207|ref|YP_001732527.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli str. K-12 substr. DH10B] gi|188495796|ref|ZP_03003066.1| membrane protein OxaA [Escherichia coli 53638] gi|191165799|ref|ZP_03027637.1| inner membrane protein OxaA [Escherichia coli B7A] gi|238902796|ref|YP_002928592.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli BW2952] gi|254038924|ref|ZP_04872976.1| inner membrane protein oxaA [Escherichia sp. 1_1_43] gi|256025563|ref|ZP_05439428.1| putative inner membrane protein translocase component YidC [Escherichia sp. 4_1_40B] gi|300917465|ref|ZP_07134125.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 115-1] gi|300947533|ref|ZP_07161710.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 116-1] gi|300956289|ref|ZP_07168591.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 175-1] gi|301028499|ref|ZP_07191739.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 196-1] gi|301644378|ref|ZP_07244379.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 146-1] gi|307140406|ref|ZP_07499762.1| putative inner membrane protein translocase component YidC [Escherichia coli H736] gi|309795745|ref|ZP_07690160.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 145-7] gi|331644430|ref|ZP_08345559.1| inner membrane protein OxaA [Escherichia coli H736] gi|331655367|ref|ZP_08356366.1| inner membrane protein OxaA [Escherichia coli M718] gi|398974|sp|P25714|OXAA_ECOLI RecName: Full=Inner membrane protein oxaA gi|254772780|sp|B1X9T4|OXAA_ECODH RecName: Full=Inner membrane protein oxaA gi|259515689|sp|C4ZYY3|OXAA_ECOBW RecName: Full=Inner membrane protein oxaA gi|290553|gb|AAA62056.1| 60 kD protein [Escherichia coli] gi|1790140|gb|AAC76728.1| membrane protein insertase [Escherichia coli str. K-12 substr. MG1655] gi|85676338|dbj|BAE77588.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli str. K12 substr. W3110] gi|169891042|gb|ACB04749.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli str. K-12 substr. DH10B] gi|188490995|gb|EDU66098.1| membrane protein OxaA [Escherichia coli 53638] gi|190904123|gb|EDV63834.1| inner membrane protein OxaA [Escherichia coli B7A] gi|226838889|gb|EEH70916.1| inner membrane protein oxaA [Escherichia sp. 1_1_43] gi|238860712|gb|ACR62710.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli BW2952] gi|260451437|gb|ACX41859.1| YidC translocase/secretase [Escherichia coli DH1] gi|299878461|gb|EFI86672.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 196-1] gi|300316876|gb|EFJ66660.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 175-1] gi|300415269|gb|EFJ98579.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 115-1] gi|300452870|gb|EFK16490.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 116-1] gi|301077319|gb|EFK92125.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 146-1] gi|308120624|gb|EFO57886.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 145-7] gi|309704153|emb|CBJ03500.1| inner membrane protein [Escherichia coli ETEC H10407] gi|315138290|dbj|BAJ45449.1| putative inner membrane protein translocase component [Escherichia coli DH1] gi|323934943|gb|EGB31321.1| membrane protein insertase [Escherichia coli E1520] gi|331036724|gb|EGI08950.1| inner membrane protein OxaA [Escherichia coli H736] gi|331047382|gb|EGI19460.1| inner membrane protein OxaA [Escherichia coli M718] Length = 548 Score = 333 bits (853), Expect = 6e-89, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|56480409|ref|NP_709495.2| putative inner membrane protein translocase component YidC [Shigella flexneri 2a str. 301] gi|33300911|sp|P59783|OXAA_SHIFL RecName: Full=Inner membrane protein oxaA gi|56383960|gb|AAN45202.2| 60 KD inner-membrane protein [Shigella flexneri 2a str. 301] gi|281603068|gb|ADA76052.1| Inner membrane protein oxaA [Shigella flexneri 2002017] gi|332750526|gb|EGJ80935.1| inner membrane protein oxaA [Shigella flexneri K-671] gi|332751712|gb|EGJ82110.1| inner membrane protein oxaA [Shigella flexneri 2747-71] Length = 548 Score = 333 bits (853), Expect = 6e-89, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|322835122|ref|YP_004215149.1| membrane protein insertase, YidC/Oxa1 family domain containing [Rahnella sp. Y9602] gi|321170323|gb|ADW76022.1| membrane protein insertase, YidC/Oxa1 family domain containing [Rahnella sp. Y9602] Length = 544 Score = 333 bits (852), Expect = 6e-89, Method: Composition-based stats. Identities = 138/570 (24%), Positives = 247/570 (43%), Gaps = 53/570 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N F+ IAL + WQ + + N + + + + Sbjct: 1 MDSQRNLFL-IALLFVSFMIWQAWQTDHAPQPANQTTQQTANTANGDATNQAVPDS---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + L +IN +G + L+ Y + S+ P L + Y Sbjct: 56 -----GQGKLITVNSDVLSLTINTRGGDIEQALLKAYPTTLGSDQPFQLL--ETTPNFLY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLD 175 A+ N S T I + + AN ++ +T + Sbjct: 109 QAQSGLTGKNGPDNPANGERPLFKASSDTFTMAEGQSELRIPMTYTAANGAIYTKTFVIK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 Y + + N + + + G++ + T +N F + A Sbjct: 169 RGSYAVNVEYNINNTTAAPLELTMFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSSSDD 228 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 QKY+ +KS N W+ + +Y+A+ +IPS + + + + F Sbjct: 229 KYQKYA-FDKSEALNVTTQGGWVAMLQQYFATAWIPSAKDTNTFF---TTTNNGISTIGF 284 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 T+ PG + L+ G + + P ++ +D+GW +FI++P+F L Sbjct: 285 KGTPFTVAPGAQQQVASILWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFKL 339 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + VGN+G +I++ T V+ + +PL + QY S A M+ +QPK+ +RE+ Q Sbjct: 340 LKFIQGFVGNWGFSIIVITFIVRGIMYPLTRAQYTSMAKMRMLQPKLAAMRERIGDDK-Q 398 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + M+ LYK+ +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+A D Sbjct: 399 RMSQEMMALYKSEKVNPLGGCLPLVIQMPIFLALYYMLSGSIELRHAPFILWIHDLSAQD 458 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P I P++M ++MF KMSP D Q I+ +MPV+F Sbjct: 459 PYY-------------------ILPVLMGITMFFIQKMSPTTVTDPMQQKIMTFMPVIFT 499 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VFFLWFPSGLVVYYIVSNLVTILQQQLIYR 529 >gi|94263631|ref|ZP_01287440.1| 60 kDa inner membrane insertion protein [delta proteobacterium MLMS-1] gi|93455936|gb|EAT06091.1| 60 kDa inner membrane insertion protein [delta proteobacterium MLMS-1] Length = 559 Score = 333 bits (852), Expect = 6e-89, Method: Composition-based stats. Identities = 150/573 (26%), Positives = 271/573 (47%), Gaps = 33/573 (5%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN--IQTVKQPNQVDN-------- 51 N+ +AI LS+ I+ +Q F++ P E E + + P Sbjct: 1 MNNYRALLAIVLSMAILLVYQFFFMPPPPESTAPEPEAPVAERATAPTAAPERPRPGTTD 60 Query: 52 ---SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 + A V + + ++ I+ G L+ + V +SP Sbjct: 61 PTGAPAPVDVSSLLAQEVEGREIVVETDLYEAVISEAGGALRSFRLKEFRETVDPDSPAK 120 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L+ ++ N + + +L + + + L ++ + F Sbjct: 121 ELV-RTDHDNGLPLRFSWGVEPHQADLLHYQSERQGRLVVPAGREQTLTLRAQSPLGLEF 179 Query: 169 ERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLG 225 RT + + +L ++ + V N ++ +P + + + +A++ Sbjct: 180 IRTYTFRDSDHLLELREEVRNTGEVPLQGAPYLALTSRPFEAEDDPLKRFLFDGPVALVD 239 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + +E+ S +F SW G D Y+ + IP ++ + F ++ Sbjct: 240 GEVHEVRPRDLVEERSGRSFTGEVSWAGYHDSYFLAAIIPREQGQATAHFS--ANREETA 297 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 ++ + PG++ + ++ G K+ ++ D +++GWF F+A+P Sbjct: 298 TTVLASAAEVLNPGEARSYEYMVYYGPKKLAELNAIGYD-----LGRSVNFGWFDFLARP 352 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 F ++S+F+ +VGN+G+AI++ T+ +K+LF+PL K S M+ IQP++ +LREKFK Sbjct: 353 AFYVLSFFHGMVGNYGLAIIMVTILIKILFWPLTHKGLKSMKVMQKIQPRMAKLREKFKD 412 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q Q+ M++LY+T+ +NPL GC P+LLQIPVFFA+YKV+ S+E+RHAPF WI DL Sbjct: 413 DK-QRQQQEMLKLYQTYKVNPLGGCLPMLLQIPVFFALYKVLLQSVELRHAPFMLWINDL 471 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 +A D I F +P + + ++M+ SMFIQ KM+P AD QA I+ ++P+ Sbjct: 472 SAPDRLYIG-------FDIPWLGGIPVLTLLMAASMFIQQKMTPI-ADPMQARIMLFLPL 523 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 VF F +F +GL++YW +NV++I QQ I + Sbjct: 524 VFFFLFLNFASGLVLYWFINNVLTIAQQYTIYR 556 >gi|170766557|ref|ZP_02901010.1| inner membrane protein OxaA [Escherichia albertii TW07627] gi|170123995|gb|EDS92926.1| inner membrane protein OxaA [Escherichia albertii TW07627] Length = 548 Score = 333 bits (852), Expect = 7e-89, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLADGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP-----QTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSINLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|15804299|ref|NP_290338.1| putative inner membrane protein translocase component YidC [Escherichia coli O157:H7 EDL933] gi|15833894|ref|NP_312667.1| inner membrane protein translocase component YidC [Escherichia coli O157:H7 str. Sakai] gi|26250446|ref|NP_756486.1| putative inner membrane protein translocase component YidC [Escherichia coli CFT073] gi|74314020|ref|YP_312439.1| putative inner membrane protein translocase component YidC [Shigella sonnei Ss046] gi|91213230|ref|YP_543216.1| putative inner membrane protein translocase component YidC [Escherichia coli UTI89] gi|110644048|ref|YP_671778.1| putative inner membrane protein translocase component YidC [Escherichia coli 536] gi|117625980|ref|YP_859303.1| putative inner membrane protein translocase component YidC [Escherichia coli APEC O1] gi|157163186|ref|YP_001460504.1| putative inner membrane protein translocase component YidC [Escherichia coli HS] gi|168748575|ref|ZP_02773597.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4113] gi|168753598|ref|ZP_02778605.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4401] gi|168759895|ref|ZP_02784902.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4501] gi|168766196|ref|ZP_02791203.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4486] gi|168772256|ref|ZP_02797263.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4196] gi|168779931|ref|ZP_02804938.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4076] gi|168786539|ref|ZP_02811546.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC869] gi|168798744|ref|ZP_02823751.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC508] gi|170022258|ref|YP_001727212.1| putative inner membrane protein translocase component YidC [Escherichia coli ATCC 8739] gi|170680368|ref|YP_001746035.1| putative inner membrane protein translocase component YidC [Escherichia coli SMS-3-5] gi|191170354|ref|ZP_03031907.1| inner membrane protein OxaA [Escherichia coli F11] gi|195936328|ref|ZP_03081710.1| putative inner membrane protein translocase component YidC [Escherichia coli O157:H7 str. EC4024] gi|208806756|ref|ZP_03249093.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4206] gi|208813372|ref|ZP_03254701.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4045] gi|208818916|ref|ZP_03259236.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4042] gi|209400160|ref|YP_002273233.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4115] gi|209921182|ref|YP_002295266.1| putative inner membrane protein translocase component YidC [Escherichia coli SE11] gi|215489045|ref|YP_002331476.1| putative inner membrane protein translocase component YidC [Escherichia coli O127:H6 str. E2348/69] gi|217325489|ref|ZP_03441573.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. TW14588] gi|218556272|ref|YP_002389186.1| putative inner membrane protein translocase component YidC [Escherichia coli IAI1] gi|218560781|ref|YP_002393694.1| inner membrane protein translocase component YidC [Escherichia coli S88] gi|218691994|ref|YP_002400206.1| putative inner membrane protein translocase component YidC [Escherichia coli ED1a] gi|218697428|ref|YP_002405095.1| putative inner membrane protein translocase component YidC [Escherichia coli 55989] gi|218702555|ref|YP_002410184.1| putative inner membrane protein translocase component YidC [Escherichia coli IAI39] gi|218707352|ref|YP_002414871.1| putative inner membrane protein translocase component YidC [Escherichia coli UMN026] gi|227883928|ref|ZP_04001733.1| Oxa1 family cytochrome oxidase biogenesis protein [Escherichia coli 83972] gi|237703507|ref|ZP_04533988.1| inner-membrane protein [Escherichia sp. 3_2_53FAA] gi|254795708|ref|YP_003080545.1| putative inner membrane protein translocase component YidC [Escherichia coli O157:H7 str. TW14359] gi|256021276|ref|ZP_05435141.1| putative inner membrane protein translocase component YidC [Shigella sp. D9] gi|260846510|ref|YP_003224288.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O103:H2 str. 12009] gi|260857884|ref|YP_003231775.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O26:H11 str. 11368] gi|261225859|ref|ZP_05940140.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O157:H7 str. FRIK2000] gi|261258904|ref|ZP_05951437.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O157:H7 str. FRIK966] gi|291285124|ref|YP_003501942.1| Preprotein translocase subunit YidC [Escherichia coli O55:H7 str. CB9615] gi|293407345|ref|ZP_06651267.1| inner membrane protein translocase component YidC [Escherichia coli FVEC1412] gi|293413160|ref|ZP_06655826.1| conserved hypothetical protein [Escherichia coli B354] gi|298383086|ref|ZP_06992681.1| inner membrane protein oxaA [Escherichia coli FVEC1302] gi|300815047|ref|ZP_07095272.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 107-1] gi|300824309|ref|ZP_07104425.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 119-7] gi|300896034|ref|ZP_07114595.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 198-1] gi|300903018|ref|ZP_07120960.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 84-1] gi|300925529|ref|ZP_07141404.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 182-1] gi|300940891|ref|ZP_07155418.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 21-1] gi|300983658|ref|ZP_07176699.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 200-1] gi|300984535|ref|ZP_07177025.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 45-1] gi|301020905|ref|ZP_07184960.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 69-1] gi|301047525|ref|ZP_07194601.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 185-1] gi|301305948|ref|ZP_07212030.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 124-1] gi|301325003|ref|ZP_07218553.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 78-1] gi|306815941|ref|ZP_07450079.1| putative inner membrane protein translocase component YidC [Escherichia coli NC101] gi|307313226|ref|ZP_07592851.1| membrane protein insertase [Escherichia coli W] gi|312967885|ref|ZP_07782097.1| inner membrane protein oxaA [Escherichia coli 2362-75] gi|331649533|ref|ZP_08350619.1| inner membrane protein OxaA [Escherichia coli M605] gi|331660049|ref|ZP_08360987.1| inner membrane protein OxaA [Escherichia coli TA206] gi|331665356|ref|ZP_08366257.1| inner membrane protein OxaA [Escherichia coli TA143] gi|331670550|ref|ZP_08371389.1| inner membrane protein OxaA [Escherichia coli TA271] gi|331675197|ref|ZP_08375950.1| inner membrane protein OxaA [Escherichia coli TA280] gi|331679804|ref|ZP_08380474.1| inner membrane protein OxaA [Escherichia coli H591] gi|331685430|ref|ZP_08386016.1| inner membrane protein OxaA [Escherichia coli H299] gi|332282505|ref|ZP_08394918.1| inner-membrane protein [Shigella sp. D9] gi|54038803|sp|P65625|OXAA_ECO57 RecName: Full=Inner membrane protein oxaA gi|54041692|sp|P65624|OXAA_ECOL6 RecName: Full=Inner membrane protein oxaA gi|122421835|sp|Q1R4M9|OXAA_ECOUT RecName: Full=Inner membrane protein oxaA gi|122957862|sp|Q0TB02|OXAA_ECOL5 RecName: Full=Inner membrane protein oxaA gi|123615901|sp|Q3YWA8|OXAA_SHISS RecName: Full=Inner membrane protein oxaA gi|166975861|sp|A8A6G7|OXAA_ECOHS RecName: Full=Inner membrane protein oxaA gi|166975862|sp|A1AHN9|OXAA_ECOK1 RecName: Full=Inner membrane protein oxaA gi|189036350|sp|B1IX33|OXAA_ECOLC RecName: Full=Inner membrane protein oxaA gi|254772773|sp|B7UMH2|OXAA_ECO27 RecName: Full=Inner membrane protein oxaA gi|254772774|sp|B7MGC7|OXAA_ECO45 RecName: Full=Inner membrane protein oxaA gi|254772775|sp|B7L849|OXAA_ECO55 RecName: Full=Inner membrane protein oxaA gi|254772776|sp|B5YXA9|OXAA_ECO5E RecName: Full=Inner membrane protein oxaA gi|254772777|sp|B7NR08|OXAA_ECO7I RecName: Full=Inner membrane protein oxaA gi|254772778|sp|B7N210|OXAA_ECO81 RecName: Full=Inner membrane protein oxaA gi|254772779|sp|B7M558|OXAA_ECO8A RecName: Full=Inner membrane protein oxaA gi|254772781|sp|B7NF23|OXAA_ECOLU RecName: Full=Inner membrane protein oxaA gi|254772782|sp|B6I3T8|OXAA_ECOSE RecName: Full=Inner membrane protein oxaA gi|254772783|sp|B1LL32|OXAA_ECOSM RecName: Full=Inner membrane protein oxaA gi|12518544|gb|AAG58902.1|AE005601_8 60 KD inner-membrane protein [Escherichia coli O157:H7 str. EDL933] gi|26110876|gb|AAN83060.1|AE016769_175 60 kDa inner-membrane protein [Escherichia coli CFT073] gi|13364115|dbj|BAB38063.1| 60 KD inner-membrane protein [Escherichia coli O157:H7 str. Sakai] gi|73857497|gb|AAZ90204.1| 60 kDa inner-membrane protein [Shigella sonnei Ss046] gi|91074804|gb|ABE09685.1| 60 KD inner-membrane protein [Escherichia coli UTI89] gi|110345640|gb|ABG71877.1| 60 kDa inner-membrane protein [Escherichia coli 536] gi|115515104|gb|ABJ03179.1| inner membrane protein translocase component YidC [Escherichia coli APEC O1] gi|157068866|gb|ABV08121.1| inner membrane protein OxaA [Escherichia coli HS] gi|169757186|gb|ACA79885.1| 60 kDa inner membrane insertion protein [Escherichia coli ATCC 8739] gi|170518086|gb|ACB16264.1| inner membrane protein OxaA [Escherichia coli SMS-3-5] gi|187771700|gb|EDU35544.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4196] gi|188016887|gb|EDU55009.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4113] gi|189002654|gb|EDU71640.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4076] gi|189359277|gb|EDU77696.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4401] gi|189364371|gb|EDU82790.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4486] gi|189369628|gb|EDU88044.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4501] gi|189373378|gb|EDU91794.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC869] gi|189378759|gb|EDU97175.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC508] gi|190909162|gb|EDV68748.1| inner membrane protein OxaA [Escherichia coli F11] gi|208726557|gb|EDZ76158.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4206] gi|208734649|gb|EDZ83336.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4045] gi|208739039|gb|EDZ86721.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4042] gi|209161560|gb|ACI38993.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. EC4115] gi|209754078|gb|ACI75346.1| GTP-binding protein in thiophene and furan oxidation [Escherichia coli] gi|209754080|gb|ACI75347.1| GTP-binding protein in thiophene and furan oxidation [Escherichia coli] gi|209754082|gb|ACI75348.1| GTP-binding protein in thiophene and furan oxidation [Escherichia coli] gi|209754084|gb|ACI75349.1| GTP-binding protein in thiophene and furan oxidation [Escherichia coli] gi|209754086|gb|ACI75350.1| GTP-binding protein in thiophene and furan oxidation [Escherichia coli] gi|209914441|dbj|BAG79515.1| conserved hypothetical protein [Escherichia coli SE11] gi|215267117|emb|CAS11564.1| cytoplasmic insertase into membrane protein, Sec-system [Escherichia coli O127:H6 str. E2348/69] gi|217321710|gb|EEC30134.1| inner membrane protein OxaA [Escherichia coli O157:H7 str. TW14588] gi|218354160|emb|CAV00764.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli 55989] gi|218363041|emb|CAR00680.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli IAI1] gi|218367550|emb|CAR05335.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli S88] gi|218372541|emb|CAR20416.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli IAI39] gi|218429558|emb|CAR10381.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli ED1a] gi|218434449|emb|CAR15377.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli UMN026] gi|222035420|emb|CAP78165.1| Inner membrane protein oxaA [Escherichia coli LF82] gi|226902771|gb|EEH89030.1| inner-membrane protein [Escherichia sp. 3_2_53FAA] gi|227839206|gb|EEJ49672.1| Oxa1 family cytochrome oxidase biogenesis protein [Escherichia coli 83972] gi|254595108|gb|ACT74469.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O157:H7 str. TW14359] gi|257756533|dbj|BAI28035.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O26:H11 str. 11368] gi|257761657|dbj|BAI33154.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O103:H2 str. 12009] gi|281180760|dbj|BAI57090.1| conserved hypothetical protein [Escherichia coli SE15] gi|284923789|emb|CBG36887.1| inner membrane protein [Escherichia coli 042] gi|290764997|gb|ADD58958.1| Preprotein translocase subunit YidC [Escherichia coli O55:H7 str. CB9615] gi|291425636|gb|EFE98672.1| inner membrane protein translocase component YidC [Escherichia coli FVEC1412] gi|291468293|gb|EFF10788.1| conserved hypothetical protein [Escherichia coli B354] gi|294493492|gb|ADE92248.1| inner membrane protein OxaA [Escherichia coli IHE3034] gi|298276922|gb|EFI18440.1| inner membrane protein oxaA [Escherichia coli FVEC1302] gi|300300585|gb|EFJ56970.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 185-1] gi|300306881|gb|EFJ61401.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 200-1] gi|300360094|gb|EFJ75964.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 198-1] gi|300398372|gb|EFJ81910.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 69-1] gi|300404924|gb|EFJ88462.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 84-1] gi|300408368|gb|EFJ91906.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 45-1] gi|300418369|gb|EFK01680.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 182-1] gi|300454372|gb|EFK17865.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 21-1] gi|300523196|gb|EFK44265.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 119-7] gi|300531939|gb|EFK53001.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 107-1] gi|300838799|gb|EFK66559.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 124-1] gi|300848097|gb|EFK75857.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 78-1] gi|305850337|gb|EFM50794.1| putative inner membrane protein translocase component YidC [Escherichia coli NC101] gi|306906909|gb|EFN37418.1| membrane protein insertase [Escherichia coli W] gi|307555846|gb|ADN48621.1| 60 kDa inner-membrane protein [Escherichia coli ABU 83972] gi|307628782|gb|ADN73086.1| putative inner membrane protein translocase component YidC [Escherichia coli UM146] gi|312287446|gb|EFR15354.1| inner membrane protein oxaA [Escherichia coli 2362-75] gi|312948273|gb|ADR29100.1| putative inner membrane protein translocase component YidC [Escherichia coli O83:H1 str. NRG 857C] gi|315063011|gb|ADT77338.1| cytoplasmic insertase into membrane protein, sec system [Escherichia coli W] gi|315254606|gb|EFU34574.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 85-1] gi|315285489|gb|EFU44934.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 110-3] gi|315296905|gb|EFU56193.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 16-3] gi|320201267|gb|EFW75848.1| Inner membrane protein translocase component YidC, long form [Escherichia coli EC4100B] gi|320639431|gb|EFX09046.1| membrane protein insertase [Escherichia coli O157:H7 str. G5101] gi|320644874|gb|EFX13910.1| membrane protein insertase [Escherichia coli O157:H- str. 493-89] gi|320650138|gb|EFX18634.1| membrane protein insertase [Escherichia coli O157:H- str. H 2687] gi|320655486|gb|EFX23421.1| membrane protein insertase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661112|gb|EFX28548.1| membrane protein insertase [Escherichia coli O55:H7 str. USDA 5905] gi|320666238|gb|EFX33244.1| membrane protein insertase [Escherichia coli O157:H7 str. LSU-61] gi|323155382|gb|EFZ41565.1| inner membrane protein oxaA [Escherichia coli EPECa14] gi|323380927|gb|ADX53195.1| membrane protein insertase, YidC/Oxa1 family domain containing [Escherichia coli KO11] gi|323939231|gb|EGB35444.1| membrane protein insertase [Escherichia coli E482] gi|323944178|gb|EGB40258.1| membrane protein insertase [Escherichia coli H120] gi|323949950|gb|EGB45834.1| membrane protein insertase [Escherichia coli H252] gi|323954999|gb|EGB50777.1| membrane protein insertase [Escherichia coli H263] gi|323975227|gb|EGB70331.1| membrane protein insertase [Escherichia coli TW10509] gi|324008042|gb|EGB77261.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 57-2] gi|324012733|gb|EGB81952.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 60-1] gi|324018426|gb|EGB87645.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 117-3] gi|324115942|gb|EGC09868.1| membrane protein insertase [Escherichia coli E1167] gi|330908022|gb|EGH36541.1| inner membrane protein translocase component YidC, long form [Escherichia coli AA86] gi|331042031|gb|EGI14175.1| inner membrane protein OxaA [Escherichia coli M605] gi|331053264|gb|EGI25297.1| inner membrane protein OxaA [Escherichia coli TA206] gi|331057866|gb|EGI29852.1| inner membrane protein OxaA [Escherichia coli TA143] gi|331062612|gb|EGI34532.1| inner membrane protein OxaA [Escherichia coli TA271] gi|331067642|gb|EGI39044.1| inner membrane protein OxaA [Escherichia coli TA280] gi|331072976|gb|EGI44301.1| inner membrane protein OxaA [Escherichia coli H591] gi|331077801|gb|EGI49013.1| inner membrane protein OxaA [Escherichia coli H299] gi|332104857|gb|EGJ08203.1| inner-membrane protein [Shigella sp. D9] Length = 548 Score = 333 bits (852), Expect = 7e-89, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|194435576|ref|ZP_03067679.1| inner membrane protein OxaA [Escherichia coli 101-1] gi|253775660|ref|YP_003038491.1| inner membrane protein translocase component YidC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163657|ref|YP_003046765.1| putative inner membrane protein translocase component YidC [Escherichia coli B str. REL606] gi|300932337|ref|ZP_07147605.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 187-1] gi|194425119|gb|EDX41103.1| inner membrane protein OxaA [Escherichia coli 101-1] gi|242379245|emb|CAQ34050.1| inner-membrane protein insertion factor, subunit of SecD-SecF-YajC-YidC Secretion Complex and Sec Protein Secretion Complex [Escherichia coli BL21(DE3)] gi|253326704|gb|ACT31306.1| 60 kDa inner membrane insertion protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975558|gb|ACT41229.1| inner membrane protein translocase component YidC [Escherichia coli B str. REL606] gi|253979714|gb|ACT45384.1| inner membrane protein translocase component YidC [Escherichia coli BL21(DE3)] gi|300459923|gb|EFK23416.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 187-1] gi|323959771|gb|EGB55421.1| membrane protein insertase [Escherichia coli H489] gi|323971183|gb|EGB66429.1| membrane protein insertase [Escherichia coli TA007] Length = 548 Score = 333 bits (852), Expect = 7e-89, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPMYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|82546030|ref|YP_409977.1| inner membrane protein translocase component YidC [Shigella boydii Sb227] gi|187730301|ref|YP_001882461.1| putative inner membrane protein translocase component YidC [Shigella boydii CDC 3083-94] gi|123558282|sp|Q31UV9|OXAA_SHIBS RecName: Full=Inner membrane protein oxaA gi|254778164|sp|B2TUS3|OXAA_SHIB3 RecName: Full=Inner membrane protein oxaA gi|81247441|gb|ABB68149.1| 60 kDa inner-membrane protein [Shigella boydii Sb227] gi|187427293|gb|ACD06567.1| inner membrane protein OxaA [Shigella boydii CDC 3083-94] Length = 548 Score = 333 bits (852), Expect = 7e-89, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKTQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|121730052|ref|ZP_01682461.1| inner membrane protein, 60 kDa [Vibrio cholerae V52] gi|121628201|gb|EAX60724.1| inner membrane protein, 60 kDa [Vibrio cholerae V52] Length = 510 Score = 333 bits (852), Expect = 7e-89, Method: Composition-based stats. Identities = 133/535 (24%), Positives = 228/535 (42%), Gaps = 37/535 (6%) Query: 36 ERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 + + + + + + + L SI+ G L Sbjct: 1 QATQQAQSTGAAPAPSFSDELDPTPAQNVAAKAKTITVSTDVLTLSIDTLGGDVVSAKLN 60 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----T 151 Y +++S V L + + + A+ V N+ + + + Sbjct: 61 QYSEELNSPESFVLLQNTQG--HQFIAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQ 118 Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 I + ++ + I Y +V V NNS + + ++ + Sbjct: 119 DELRIPMTYQANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGG 178 Query: 212 N-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVFIPSKET 269 N G D + + D++ ++S + +W+ + Y+AS +IP E Sbjct: 179 NLAMPTYRGGAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEP 238 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + +++ TI G L+ G K + P Sbjct: 239 QAQLYSRVINNLGD---MGIRTPNKTIANGDKAEFEATLWVGPKLQDQMAATA-----PN 290 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 ++++D+GW +FIAKP+ L+S VGN+G+AI+ T V+ +PL K QY S A M Sbjct: 291 LDLVVDYGWLWFIAKPLHWLLSVIQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKM 350 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ +RE+ Q + + M++LYK +NPL GC PILLQ+P+F A+Y + Sbjct: 351 RMLQPKLQAMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALME 409 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+E+RH+PF+GWI DL+A DP I P++M SMF+ KMSP Sbjct: 410 SVELRHSPFFGWIHDLSAQDPYY-------------------ILPLLMGASMFVIQKMSP 450 Query: 510 PP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K + Sbjct: 451 TTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 505 >gi|160901487|ref|YP_001567069.1| 60 kDa inner membrane insertion protein [Delftia acidovorans SPH-1] gi|160367071|gb|ABX38684.1| 60 kDa inner membrane insertion protein [Delftia acidovorans SPH-1] Length = 570 Score = 333 bits (852), Expect = 7e-89, Method: Composition-based stats. Identities = 135/602 (22%), Positives = 241/602 (40%), Gaps = 53/602 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYP----------------RIEEMNNERKNIQTVK 44 M + + +V W + V+ E Sbjct: 1 MNDIRRTILWVIFGFSLVLLWDKWQVHSGKKATFFPAPAVATAPAPETGKAPGDASVPSA 60 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + A + V + L + + +G L Y V + Sbjct: 61 AAAATAGAGEVPGGAAAAPEAAPRQNVTISTDVLRLTFDSQGGTLRHAELLKYADSVHKD 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 P+V L + Y + + + K ++ + Sbjct: 121 KPVV--LFDESVHRVYLGQSGLIGGGFPTHKTTMTALPGARELKDGEDQMELRFESPDMG 178 Query: 165 NILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA---TNTFGVQEGF 220 + + +L Y + V N + +++R + + + G Sbjct: 179 GVKLVKIWTLKRGAYDIGVRHEVVNTGTAAVSPQLYLQLVRDGNKPEGEQSTMYSTFTGP 238 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLS 279 +K + ++ DIE S S+ ++ + Y+AS ++ ++ + + + Sbjct: 239 AVYTDEKKYQKVEFKDIESGKASVEKSSSGGYVAMVQHYFASAWLLAEGIQRDNFLRKVD 298 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 + Y TI PG+S + LFAG + + P E++ D+GW Sbjct: 299 NN--LYAVGMITPVGTIEPGQSKSVEARLFAGPQIEKRLESLA-----PGLELVKDYGWL 351 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +AKP++ L+ + +GN+G +I+ + +K+ F+ L K Y S A MK I P+I E+ Sbjct: 352 TILAKPLYWLLDKLHGFLGNWGWSIVALVLLLKIAFYWLNAKAYSSMAKMKAINPRIMEM 411 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+ K PQ +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+E+R+AP+ Sbjct: 412 RERLKD-KPQQMQQEMMRIYREEKVNPMGGCLPIIIQIPVFIALYWVLLSSVEIRNAPWI 470 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 GWI DL+A DP I P++M+LS +Q ++P P D QA + Sbjct: 471 GWITDLSAKDPLF-------------------ILPVLMTLSSLLQTALNPAPPDPMQAKM 511 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 + MP+VF FPAGL++YW +N++SI QQ +I G L F K+ Sbjct: 512 MWIMPLVFSVMFFFFPAGLVLYWLTNNILSIAQQWIINTRMGVPPQF--NLPK-FGKSTP 568 Query: 580 SQ 581 ++ Sbjct: 569 AK 570 >gi|194431207|ref|ZP_03063500.1| inner membrane protein OxaA [Shigella dysenteriae 1012] gi|194420662|gb|EDX36738.1| inner membrane protein OxaA [Shigella dysenteriae 1012] Length = 548 Score = 332 bits (851), Expect = 7e-89, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMATVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|261400585|ref|ZP_05986710.1| membrane protein insertase, YidC/Oxa1 family [Neisseria lactamica ATCC 23970] gi|269209662|gb|EEZ76117.1| membrane protein insertase, YidC/Oxa1 family [Neisseria lactamica ATCC 23970] Length = 548 Score = 332 bits (851), Expect = 8e-89, Method: Composition-based stats. Identities = 136/575 (23%), Positives = 230/575 (40%), Gaps = 55/575 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A+++ I+ W+ + P+ + Q + A Sbjct: 1 MDF-KRLTAFFAIALAIMIGWEKMFPAPQTAPAPGQAAQQQRQTVATASAEAALAPATP- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y + P V L + Y Sbjct: 59 ----------ITVTTDAVQAVIDEKSGDLRRLTLLKYKATGDEHKPFV--LFGDGKEYTY 106 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + ++L N + ++ + YL Sbjct: 107 VAQSELLDAQGNNVLKGIGFTAPQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 166 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237 + + N S RI+R + Q + G + + + +SD+ Sbjct: 167 VNVRFDIANTGGKPANLSADYRIVRDRSQPEGQGYFTRSYLGPVVYTPEGGFQKVSFSDL 226 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + Sbjct: 227 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCAAGECGIDIKRRNDKL 286 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A I G T L+AG + I + ++ D+G ++ A Sbjct: 287 YSASVGVPLAAIPAGAKAETAVNLYAGPQTTSVIAGIAD-----KLQLAKDYGKVHWFAS 341 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 342 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 401 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 402 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 460 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ +DP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 461 LSRSDPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 501 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 502 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 536 >gi|254447604|ref|ZP_05061070.1| inner membrane protein, 60 kDa [gamma proteobacterium HTCC5015] gi|198262947|gb|EDY87226.1| inner membrane protein, 60 kDa [gamma proteobacterium HTCC5015] Length = 553 Score = 332 bits (851), Expect = 9e-89, Method: Composition-based stats. Identities = 143/577 (24%), Positives = 265/577 (45%), Gaps = 42/577 (7%) Query: 1 MERNWNYFVA-IALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVD-------- 50 M+ + + +AL ++Y WQ+ Y + E + Q Sbjct: 1 MDNLRIFLLISLALVGAMIYGQWQDDYADQKAAVTQTESASSSVTTPNPQAAKDLPSRPV 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + ++ D A+ + + +K L +IN +G + L Y ++ + +V L Sbjct: 61 SENSSTTADTAAETQVENQSIRVKTDVLDIAINTRGGNVVESQLLQYSTELGEET-LVKL 119 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPIKLVFKNANNIL 167 S+ +F+ + + P+ + V+ + T + LV++ + Sbjct: 120 --QSSQPQRFFSVQSGLLGNAGVPAPDHHAVYRSEKTEYQLGAKDTVTVPLVWEQDGLRV 177 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 +R YLF + + N + ++ R + +++ F V + + Sbjct: 178 TKRYTFYKGSYLFDLSFEIDNQTPQNWSGHQYRQLQRAEFDDSSSPFLVTYTGGVIYNQE 237 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 ++ D + S + + W + Y+ + +P KET+ H + +S + Sbjct: 238 DRYQKLDYDELEESPLSQSFDHGWAAMIQHYFLTALVPPKETANHYYSRGVSKAEGKRYI 297 Query: 288 -KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 ++ EI + G+S + T +F G K + + ++ +D+G+ ++KP+ Sbjct: 298 LGMTSPEIAVPAGESASRTTQVFVGPKLQDRLEEVAE-----GLDLTVDYGFLTVLSKPL 352 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+S+ + +GN+G +I++ T +KLLFFPL++ Y S A M+ + PK+ ++RE++ Sbjct: 353 FHLLSWLHGFIGNWGWSIIVLTAIIKLLFFPLSQASYRSMAKMRQVTPKLQQIRERYSD- 411 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q L + M++LYKT INP+ C P+L+QIPVF A+Y + S+E+R APF WI DL+ Sbjct: 412 DRQRLSQEMMKLYKTEKINPVGSCLPMLIQIPVFIALYWALLESVELRQAPFILWINDLS 471 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP + P+IM L+M++Q K++P P D QA + MPVV Sbjct: 472 TKDPFY-------------------VLPLIMGLTMYLQQKLNPTPPDPMQAKVFMMMPVV 512 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F + FP+GL++YW +N +SI+QQ I + AE Sbjct: 513 FTAFFAFFPSGLVLYWVTNNTLSIIQQWWITRQLEAE 549 >gi|193063841|ref|ZP_03044928.1| inner membrane protein OxaA [Escherichia coli E22] gi|192930556|gb|EDV83163.1| inner membrane protein OxaA [Escherichia coli E22] Length = 548 Score = 332 bits (851), Expect = 9e-89, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVPVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|332533704|ref|ZP_08409563.1| OxaI/YidC membrane insertion protein [Pseudoalteromonas haloplanktis ANT/505] gi|332036868|gb|EGI73329.1| OxaI/YidC membrane insertion protein [Pseudoalteromonas haloplanktis ANT/505] Length = 545 Score = 332 bits (851), Expect = 9e-89, Method: Composition-based stats. Identities = 135/569 (23%), Positives = 247/569 (43%), Gaps = 36/569 (6%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME + + + +S ++ W N Y P+ + + + + S + + Sbjct: 1 MESQRTFLLIGLMLVSFLLFQEWDNDYNKPKADPSATTQTLQANSPESDDYIPSSSDSGL 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A L+ +E+ I+ KG + +L Y S +P LL ++ Sbjct: 61 PASAT-LAKRSVIEITTDVFKVKIDTKGGDIVETDLLQYEKTKGSETPY-MLLGQLDSGK 118 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNANNILFERTISLD- 175 YF++ + N ++ + L F ++N + F +T Sbjct: 119 QYFSQSGLIGLNGPDASANGRPTYSTEQKSYTLTGDELRVPLQFTDSNGVSFTKTYVFKK 178 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + + N + ++ +I R + + G ++ + +S Sbjct: 179 GQYDVGLEYKINNTTSAPLQVQLYTQIKRTVQEKGSMVDQNYLGAAYGTDEEPYEKYSFS 238 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D+ +++ ++ Y+ S ++P ++ + A + Sbjct: 239 DMADKNLNKN-TQGGYVAFIQHYFVSAWVPMQDQTNTIYSLITKSNAA--IIGAKDPAVN 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I G T T + G KE + P ++ +D+GW +FI++P+F+L+ + ++ Sbjct: 296 IQAGSEQTLTATYYMGPKESDILEAIH-----PDLDLTVDYGWLWFISQPLFVLLKWLHS 350 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++GN+G+AI+ T+ VK L +PL K QY S A M+ +QPK+ L+EKF Q +A Sbjct: 351 ILGNWGVAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMAALKEKFGD-DRQKFGQAT 409 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +++YK +NP+ GC+PILLQ+P+F A++ V S E+RHA F W+ DL+A DP Sbjct: 410 MEMYKKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFIFWLTDLSAQDPYY--- 466 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534 + PI+ SMF+ K+ P D Q ++ +MPV+F F Sbjct: 467 ----------------VLPILFGASMFVTQKLQPMTVTDPMQQKMMTFMPVIFSVFFLWF 510 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+GL++YW SN+ISIVQ +I + + Sbjct: 511 PSGLVLYWLVSNLISIVQMLIIYRGMEKK 539 >gi|194291287|ref|YP_002007194.1| inner membrane protein translocase component yidc [Cupriavidus taiwanensis LMG 19424] gi|254772772|sp|B3R883|OXAA_CUPTR RecName: Full=Inner membrane protein oxaA gi|193225122|emb|CAQ71133.1| preprotein translocase, cooperates with SecYEG and SecDFyajC translocon, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 559 Score = 332 bits (851), Expect = 9e-89, Method: Composition-based stats. Identities = 151/586 (25%), Positives = 248/586 (42%), Gaps = 60/586 (10%) Query: 1 MERNWNYFVAIALSVIIVYAW----------QNFYVYPRIEEMNNERKNI---------Q 41 M+ + + S+ +V + F+ ++ + + Sbjct: 1 MDI-KRTILWVIFSMSLVLLYDNWQRANGHASMFFPSTTQQQAASAPAASGAAAQGDVPK 59 Query: 42 TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 QP ++ A +A A ++ + ++ I+ G L L H Sbjct: 60 ANVQPATGTSAAPAAGAAPQAAAQPTGEKIVVTTDTVRAEIDTAGGIVSRLELLKEHE-- 117 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP---TTPIKL 158 + V L + Y A + +LPN TV+ G + L Sbjct: 118 -KDGKPVVLF-ERDNVRTYMARSGLI----GGDLPNHTTVFTAAPGPRALDGAEQVQVVL 171 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQ 217 + L + Y+ VTN + + + R + + F Sbjct: 172 TGEKNGVKLVKTYTFRKGSYVVDSKFDVTNAGTAPVSPTLYLELARDGSKVEQSQFYSTF 231 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFK 276 G + + DI K + +N W+ + Y+AS +IP F Sbjct: 232 TGPAIYTDADKYHKLSFEDIAKGKATVPAAANNGWVAMVQHYFASAWIPQTGKEH--SFY 289 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 Y+ + PG +++T LFAG +E + P E++ D+ Sbjct: 290 VQQIDPNLYRVGIQQPLGELAPGATVSTDARLFAGPQEEHMLEKIA-----PGLELVKDY 344 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW +AKP+F L+ + +GN+G +I+ TV +KL+FFPL+ Y S MK++QP++ Sbjct: 345 GWLTILAKPLFWLLEKLHGFLGNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRM 404 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +RE++K PQ + + M+ LY+T +NPL GC PI++QIPVF A+Y V+ S+EMR A Sbjct: 405 TSIRERYKN-DPQKMNQEMMALYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGA 463 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ GWI DL+ DP I PI+M++SMF+Q K++P P D Q Sbjct: 464 PWLGWIHDLSVPDPFY-------------------ILPIVMAVSMFVQTKLNPTPPDPVQ 504 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 A ++ MP+VF FPAGL++YW +N++SI QQ I +M G Sbjct: 505 AKVMMIMPLVFSVMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGK 550 >gi|324111603|gb|EGC05584.1| membrane protein insertase [Escherichia fergusonii B253] Length = 548 Score = 332 bits (851), Expect = 9e-89, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAESQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|194428126|ref|ZP_03060670.1| inner membrane protein OxaA [Escherichia coli B171] gi|194413884|gb|EDX30162.1| inner membrane protein OxaA [Escherichia coli B171] Length = 548 Score = 332 bits (851), Expect = 9e-89, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 250/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKKLNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|329894825|ref|ZP_08270625.1| OxaI/YidC membrane insertion protein [gamma proteobacterium IMCC3088] gi|328922719|gb|EGG30053.1| OxaI/YidC membrane insertion protein [gamma proteobacterium IMCC3088] Length = 554 Score = 332 bits (850), Expect = 1e-88, Method: Composition-based stats. Identities = 144/574 (25%), Positives = 255/574 (44%), Gaps = 45/574 (7%) Query: 1 MERNWNYFVAI--ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ + LS +++ W F ++ + +S +I Sbjct: 1 MDIQRYALIGAIAVLSWMLLTEWVIFKDKATEQQAVMTPAFAPSESVSLDDSSSDIPSII 60 Query: 59 DDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 D ++ + + + +L+ +I+L+G LR Y + S LL Sbjct: 61 DASDESSLGLSNATNQGVINVTTDTLVATIDLQGGDIVYAGLRDYLAKIDDPSNPFVLL- 119 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN---ILFE 169 N + Y A+ + + + + + + + +N + + Sbjct: 120 EQNARRVYVAQSGLIGPDGVDSKARAQYRSEEANYALADDQATLSVKLYHTDNAGLSVVK 179 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-----FGVQEGFIAVL 224 + +L + ++N+ + G++ R ++ G Sbjct: 180 EFVFNRGTHLIDVNYQLSNSDVKSKTVYLFGQLKRDSSADPSSENSGMGLAPFLGAATSN 239 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 D + + D+ + SW+ + Y+ S +IP+ + + DG Sbjct: 240 ADDRFKKFNFKDMLEEPYKA-QTQGSWIALIQHYFLSAWIPNPDKIHTYTTRVTKDGFN- 297 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 A F + + PG + TT+ L+ G K+ T+ P E+ +D+GW ++IA+ Sbjct: 298 -IAGFLSPATVVAPGATATTSAQLYVGPKDQYTLEKIS-----PFLELSVDYGWLWWIAQ 351 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ + LVGN+G+AI+L TV +K FF L+ Y S ANM+ +QPK+ ++RE++ Sbjct: 352 PLFWLLTKIHGLVGNWGVAIILLTVLIKGAFFKLSAASYRSMANMRRVQPKMADIREQYA 411 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q +AM++LYK INP+ GC PIL+Q+PVF A+Y + S+E+RHAPF WI D Sbjct: 412 DDK-QKQSQAMMELYKKEKINPMGGCLPILVQMPVFIALYWTLMESVELRHAPFALWIND 470 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP + PI+M SM+ K++PPP D QA ++ W+P Sbjct: 471 LSVMDPYF-------------------VLPILMGASMWFMQKLNPPPPDPMQAKLMQWLP 511 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +VF F FPAGL++YW +N++S+ QQ +I K Sbjct: 512 IVFTFFFLWFPAGLVLYWVVNNLLSMTQQYIITK 545 >gi|332525676|ref|ZP_08401825.1| yidc translocase/secretase [Rubrivivax benzoatilyticus JA2] gi|332109235|gb|EGJ10158.1| yidc translocase/secretase [Rubrivivax benzoatilyticus JA2] Length = 552 Score = 332 bits (850), Expect = 1e-88, Method: Composition-based stats. Identities = 132/580 (22%), Positives = 224/580 (38%), Gaps = 47/580 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEE----------MNNERKNIQTVKQPNQVD 50 M + + + W + + Sbjct: 1 MTDIRRTILWVVFVTSLFLLWDAWNKHNGQPSLFGGPARPAATAASAPGSAASAGVPTAS 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + A + +V + + + + G Q L L Y + +V L Sbjct: 61 AVQTPAGAVPQPAAPAGGEQVVVTTDLVKATFDSIGGQLVRLELLNYRDANHPDQNVVLL 120 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANN 165 Y A+ ++ + LP T + G L + Sbjct: 121 --DRVAAREYVAQTGLITGQAGVALPTHLTPMTVAPGARTLADGQDSLTLRFETAPLDGR 178 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAV 223 L + Y + N + ++ R P+ ++ + G Sbjct: 179 RLVKTYTFKRGDYAVGVRHEFVNEGSTPVTPQLYLQLARDGNAPEGESHFYSTFTGPAMF 238 Query: 224 LGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + DI K+ + ++ W+ + Y+AS +I +F+ G Sbjct: 239 TSTSKYKKIDFKDIAKNDAGHDKTANDGWIAMVQHYFASAWIV--NAEGQREFRTAKIGD 296 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y + PG S + LF G + ++ P E L D+GW + Sbjct: 297 NLYTIAMVLPMGEVAPGASKALESQLFVGPQLETSLAALA-----PGLEYLKDYGWLMPL 351 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 +KP+F L+ + +GN+G AI+ V +K+ F+ L Y S A M+ I P++ E+RE+ Sbjct: 352 SKPLFWLLDKLNSAIGNWGWAIVALVVLLKIAFYWLNASAYKSMAKMRAINPRVMEMRER 411 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +K PQ +Q+ M+++Y+ +NPL GC PIL+Q+P F A+Y V+ S+EMR+AP+ GWI Sbjct: 412 YKD-KPQQMQQEMMRIYREEKVNPLGGCLPILIQMPFFIALYWVLLSSVEMRNAPWIGWI 470 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+A DP I PI+M+ S +Q+ + P D QA ++ + Sbjct: 471 TDLSAKDPWF-------------------ILPILMTASSLVQVALGAKPPDPMQARLMWF 511 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP+ F FPAGL++YW +NV+SI QQ I K G Sbjct: 512 MPLAFGVMFFFFPAGLVLYWLTNNVLSIAQQWYINKKLGV 551 >gi|163859332|ref|YP_001633630.1| putative inner membrane protein translocase component YidC [Bordetella petrii DSM 12804] gi|254772752|sp|A9IJB7|OXAA_BORPD RecName: Full=Inner membrane protein oxaA gi|163263060|emb|CAP45363.1| yidC [Bordetella petrii] Length = 563 Score = 332 bits (850), Expect = 1e-88, Method: Composition-based stats. Identities = 146/592 (24%), Positives = 253/592 (42%), Gaps = 53/592 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYP------------------RIEEMNNERKNIQT 42 M+ + + S ++ W N+ ++ ++ + Sbjct: 1 MDI-RRTILWMIFSFSLLLLWNNWQIHNGKPSLFGTPPASSAASPAEGQQAAANGQAATP 59 Query: 43 VKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + + V A A + +V + L + + GAQ L Y Sbjct: 60 SVPTTPAAAAASTVPGATAAPAAAKVEQVVVSTDVLRLTFDTTGAQLIRAELLKYPTSGQ 119 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVF 160 N P V L + + Y + V N PN T + L+S + + Sbjct: 120 PNKPTVLL--DRSPELTYVVQSGLVGAPNGQSFPNHQTPFRLVSTDHELKGDSLQVVFEA 177 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQE 218 + + + Y + ++ N S + S ++ R P ++ + Sbjct: 178 DSGGLKVTKTYTLHRGRYDIDVQHSLANTSDAPLAPSLYLQLERDGNDPADTSSFYHTFT 237 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKY 277 G + +SDI K S + N WL + Y+A+ ++P + ++ Sbjct: 238 GVAVYSEQDKFQKITFSDIAKGKGSYIKQADNGWLAVVQHYFATAWVPPQGKQRTNELLQ 297 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + Y A+ T+ PG + + L+ G ++ + P E+++D+G Sbjct: 298 VQPN--LYAARSIEAVGTVQPGATAQVDSRLWVGPQDQKAMAAVA-----PGLELVVDYG 350 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W IAKP+F L+++ ++L+GN+G AI+ TV +K +FFPLA Y S A MK + P++ Sbjct: 351 WLTIIAKPLFSLLTWLHSLLGNWGWAIVALTVIIKAVFFPLAAASYRSMARMKQVAPRLQ 410 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L+EK+ Q L +AM+++Y+T INPL GC P+++QIPVF A+Y V+ S+EMR AP Sbjct: 411 ALKEKYGD-DRQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAP 469 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W+ DL+ DP I P +M +MF+Q+K++P P D QA Sbjct: 470 WILWVHDLSVRDPYF-------------------ILPAVMMATMFLQIKLNPTPPDPIQA 510 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 ++ MP+VF + FPAGL++YW +N +SI QQ I + + Sbjct: 511 KVMMIMPLVFGGMMFFFPAGLVLYWCVNNTLSIAQQWTITRNLQRKAEAAAN 562 >gi|34499859|ref|NP_904074.1| putative inner membrane protein translocase component YidC [Chromobacterium violaceum ATCC 12472] gi|81711621|sp|Q7NPT8|OXAA_CHRVO RecName: Full=Inner membrane protein oxaA gi|34332914|gb|AAQ62063.2| integral membrane protein, 60 kDa [Chromobacterium violaceum ATCC 12472] Length = 545 Score = 332 bits (850), Expect = 1e-88, Method: Composition-based stats. Identities = 142/568 (25%), Positives = 246/568 (43%), Gaps = 46/568 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + + LSV I++ W +++ + + T N + A Sbjct: 1 MDSKRLIIFVLLSVGILFGWNEYFMPKHTPQQQAAKTQATTGAANNVAQPADANK----- 55 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 L+ R+++K + I+ G L L + P L + K Y Sbjct: 56 ---LTRGQRIQVKTDLVEAEIDTVGGDLRSLKLLKHGAAEDHKQPFQ--LFEDSAKRVYV 110 Query: 122 AELDYVSTANNIELPNSNTVWNL-ISGKILTPTTPIKLVFKNANNILFERTISLDEH-YL 179 A+ V+ +N + + S ++ T +KL +AN + + + ++ Y Sbjct: 111 AQTGLVAASNPALPTHKTVFTSDKPSYQLTGDTLEVKLTAPDANGVKVSKVYTFKKNSYE 170 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 + + N + + R++R P+ G + + + D+ Sbjct: 171 IGVRYDIVNGGAAPLAPTAYYRLLRDSQAPEGEGRMAHTYTGPAVYTSEHKFQKVSFDDL 230 Query: 238 EKSSISN-FHESNSWLGISDKYWASVFI--PSKETSFHSQFKY----LSDGHARYQAKFS 290 K ++ W+ + Y+ S +I P S + L + A Sbjct: 231 AKGKGDYAKTTTDGWVAMLQHYFMSAWILKPLDGASVCKDERSCRFELKETAGLNSAAAL 290 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + T+ PGKS++ + L+AG +E+ I E D+G FY A P+F L+ Sbjct: 291 VDYATVAPGKSLSVSVPLYAGPEEYNIISKLAD-----GMEYAKDFGIFYIFASPLFWLL 345 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + LV N+G AI+L T+ VK +F+PL Y S A MK + P+++ L+ + + Sbjct: 346 VKLHGLVSNWGWAIVLLTLTVKAVFYPLTAASYRSMAKMKALAPRLERLKAQHGDDRMK- 404 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 Q+A++++YKT +NPL GC P+L+QIPVF +Y + S+E+R AP+ W DLA DP Sbjct: 405 FQQAVMEMYKTEKVNPLGGCLPMLIQIPVFIGLYWALLASVELRGAPWVLWYTDLARPDP 464 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I P+IM+ +MF+Q ++PPPAD QA ++ MP+ F Sbjct: 465 YY-------------------ILPVIMAATMFLQTFLNPPPADPMQAKMMKIMPLAFSAL 505 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++Y+ +NV+S+ QQ I K Sbjct: 506 FFFFPAGLVLYYVVNNVLSMAQQWFINK 533 >gi|113869679|ref|YP_728168.1| putative inner membrane protein translocase component YidC [Ralstonia eutropha H16] gi|123133468|sp|Q0K5C1|OXAA_RALEH RecName: Full=Inner membrane protein oxaA gi|113528455|emb|CAJ94800.1| inner membrane protein [Ralstonia eutropha H16] Length = 555 Score = 332 bits (850), Expect = 1e-88, Method: Composition-based stats. Identities = 154/582 (26%), Positives = 245/582 (42%), Gaps = 56/582 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY--------PRIEEMNNERKNIQTVKQPNQVDNS 52 M+ + + S+ +V + N+ P + V + Sbjct: 1 MDI-KRTILWVIFSMSLVLLYDNWQRSQGHASMFFPSTTQQAASAPAASGAAAQGDVPKA 59 Query: 53 Y-------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A +A A +V + ++ I+ G L L H + Sbjct: 60 NVAPGAAGTAAPAAPQAAAQPTGEKVVVTTDTVRAEIDTAGGIVSRLELLKEHE---KDG 116 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP---TTPIKLVFKN 162 V L + Y A + +LPN TV+ G + L + Sbjct: 117 KPVVLF-ERDNVRTYMARSGLI----GGDLPNHTTVFTAAPGPRTLDGAEQLEVALTAEK 171 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQEGFI 221 L + + Y+ VTN + + + R + + F G Sbjct: 172 NGVKLVKTYVFRKGSYVVDTKFAVTNAGAAPVSPTLYLELARDGSKVEQSQFYSTFTGPA 231 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + DI K + +N W+ + Y+AS +IP F Sbjct: 232 VYTDADKYHKIDFEDIAKGKATVPAAANNGWVAMVQHYFASAWIPQTGKEH--SFYVQQI 289 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y+ + PG ++TT LFAG +E + P E++ D+GW Sbjct: 290 DPHLYRVGVQQPLGELAPGATVTTDARLFAGPQEEHMLEKIA-----PGLELVKDYGWLT 344 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 +AKP+F L+ + +GN+G +I+ TV +KL+FFPL+ Y S MK++QP++ +R Sbjct: 345 ILAKPLFWLLEKLHGFLGNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIR 404 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E++K PQ + + M+ LYKT +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ G Sbjct: 405 ERYKN-DPQKMNQEMMGLYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLG 463 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+ DP I PI+M++SMF+Q K++P P D QA ++ Sbjct: 464 WIHDLSVPDPFY-------------------ILPIVMAVSMFVQTKLNPTPPDPVQAKVM 504 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP+VF FPAGL++YW +N++SI QQ I +M G Sbjct: 505 MIMPLVFSVMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGK 546 >gi|212211697|ref|YP_002302633.1| 60 kDa inner membrane protein [Coxiella burnetii CbuG_Q212] gi|254772771|sp|B6J2B4|OXAA_COXB2 RecName: Full=Inner membrane protein oxaA gi|212010107|gb|ACJ17488.1| 60 kDa inner membrane protein [Coxiella burnetii CbuG_Q212] Length = 566 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 135/576 (23%), Positives = 244/576 (42%), Gaps = 44/576 (7%) Query: 2 ERNWNYFVAIA---LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 + + L++ + AWQ Y E+ ++ Sbjct: 1 MDIKRIILYVIVALLAIALFNAWQRDYPPTPKPTPTVEQPTANGDHPTAYTPPAFTPGAA 60 Query: 59 DDRAQA--------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + +A +S + + ++ L I+ +G L Y + + V + Sbjct: 61 EKTKKAGTIALTSKVSEARLITVRTDVLDVEIDTQGGNIVSAKLPKYPVSLEEKQTPVQI 120 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 LS Y A+ + + + ++L + + +L + Sbjct: 121 LSGE-PNELYVAQSGLTNGNGQPTTVQFESEKKQYVLENGQNQLIVQLTGRAPDGLLVTK 179 Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS- 228 T + + Y + V NN+ + S +I R +P T + F V+ A +G Sbjct: 180 TYTFHRDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHFYVRSYNGASMGSPQT 239 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHAR 284 + Y ++K +I +S W+ + Y+ S ++P + + ++ SD Sbjct: 240 PYEKLSYESLDKQNIDRTSQS-GWIAMQQHYFLSAWVPGNPELTYHYYSHVIPASDEPNV 298 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y F + ++ + G T L+ G + + P E ID+GW + I+ Sbjct: 299 YVVGFVSPQMNVAAGSEAATHATLYVGPEIAKRLKGLA-----PGLERTIDYGWLWPISM 353 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F ++S + + N+G +I++TT+ +K++F+ + K + S A M+ +QP+I L+E+ Sbjct: 354 LLFWILSAVHAVFKNWGWSIIITTILIKIVFYWFSAKSFRSMARMREMQPRIQALKERHG 413 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q L +A ++LY+ INPL GC P+L+Q+PVF A Y VI S+++R APF WI D Sbjct: 414 D-DRQALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIESVQLRQAPFIFWIHD 472 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I PIIM LSM Q +SP D Q ++ +P Sbjct: 473 LSVKDPYY-------------------ILPIIMGLSMLAQQWLSPTSPDPTQQKMMWILP 513 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 V+F +FPAGL++YW +NV+ +QQ + K + Sbjct: 514 VIFTVFFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549 >gi|218551236|ref|YP_002385028.1| inner membrane protein translocase component YidC [Escherichia fergusonii ATCC 35469] gi|254772785|sp|B7LK48|OXAA_ESCF3 RecName: Full=Inner membrane protein oxaA gi|218358778|emb|CAQ91436.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia fergusonii ATCC 35469] Length = 548 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 250/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFILK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227 Y + V N + S G++ + ++ G D+ Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPYLDTGSSNFALHTFRGAAYSTPDE 228 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|323965767|gb|EGB61218.1| membrane protein insertase [Escherichia coli M863] Length = 548 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 250/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + + +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDTNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQAGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|254282101|ref|ZP_04957069.1| inner membrane protein, 60 kDa [gamma proteobacterium NOR51-B] gi|219678304|gb|EED34653.1| inner membrane protein, 60 kDa [gamma proteobacterium NOR51-B] Length = 572 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 133/541 (24%), Positives = 234/541 (43%), Gaps = 37/541 (6%) Query: 26 VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLK 85 + T + + + + S + +K +L I+L Sbjct: 52 EAQTPAANSGPVPETPTPAVTVEDLPTLTDAVPAPSQDIAADSTLIAVKTETLELVIDLN 111 Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNL 144 G ++ L + + + LL N + Y A+ V + + Sbjct: 112 GGDIIEVALPRFPEQIDDPNQPFMLL-EQNDRRTYIAQSGLVGSDGIDHPQRAHYVSAQS 170 Query: 145 ISGKILTPTTPIKLVFKNANNIL-FERTISLDEHYLF-KIVDTVTNNSIDQIRFSPRGRI 202 I+L + ++ L + +LD + +VTNN + + P ++ Sbjct: 171 EYTATPGQPLSIELAWAGNSSELAITKRFTLDPESYVVDVEYSVTNNRGSRWQAVPFAQL 230 Query: 203 MRHKPQTATNT-----FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257 R G D + + DI W+ + Sbjct: 231 KRDNTPPPNADTSGLGMKPFLGAALTQPDDRFTKFDFGDIADEPFRKT-LPGGWIALMQH 289 Query: 258 YWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317 Y+ S +I + S + + + G F++ + + G + + L+ G K+ Sbjct: 290 YFVSAWIANPNQSHNYSTRQTTSGFN--IVGFTSPALAVDSGNTGSAGYRLYVGPKDQYQ 347 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + ++ +D+GW ++IA+P+F L++ ++VGN+G+AI+L TV VK FF Sbjct: 348 LAELSD-----HLDLTVDYGWLWWIAQPLFWLLTKIQSVVGNWGVAIILLTVLVKGAFFK 402 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 L+ Y S A M+ +QPK+ ++RE++ + + M++LY+ +NP+ GC PIL+Q+ Sbjct: 403 LSATSYRSMARMRKLQPKMVDIREQYADDKSK-QSQMMMELYRKEKVNPMGGCLPILIQM 461 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 PVF A+Y V+ S+E+RHAPF WIKDL+ DP + P++M Sbjct: 462 PVFIALYWVLMESVELRHAPFVLWIKDLSVMDPYF-------------------VLPLMM 502 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 SMF K++PPP D QA I+ W+PV+F F FPAGL++YW +N++S+ QQ VI Sbjct: 503 GASMFFMQKLNPPPPDPMQAKIMQWLPVIFTFFFLWFPAGLVLYWVVNNLLSMTQQYVIT 562 Query: 558 K 558 + Sbjct: 563 R 563 >gi|77361918|ref|YP_341493.1| preprotein translocase; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase [Pseudoalteromonas haloplanktis TAC125] gi|123589158|sp|Q3IK55|OXAA_PSEHT RecName: Full=Inner membrane protein oxaA gi|76876829|emb|CAI88051.1| preprotein translocase ; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase [Pseudoalteromonas haloplanktis TAC125] Length = 544 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 137/570 (24%), Positives = 242/570 (42%), Gaps = 39/570 (6%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME F+ I L S ++ W Y P+ + + T + + + Sbjct: 1 MESQR-TFLFIGLMLVSFLLFQEWNTDYNTPKADPSATTQTLNPTSSESEDYVPTSSDSA 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + A L+ +E+ I+ +G + L Y S +P + L Sbjct: 60 LPASAT-LAKRSVIEITTDVFKVKIDTRGGDIVETYLLQYEETKGSETPYMLLGEFDG-- 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVFKNANNILFERTISL- 174 YF++ + +++ + L F ++N + F +T Sbjct: 117 KQYFSQSGLIGLNGPDASAQGRPTYHVEQKSYTLTGDELRVPLQFTDSNGVNFTKTYVFK 176 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 Y + T+ N + ++ ++ R + G D + + Sbjct: 177 KGQYDVALEYTINNTTSTPLQVQLYTQVKRTVQDKGSMVDQNYLGAAYGTDDDPYEKYSF 236 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 SD+ +++ ++ Y+ S ++P ++ S L + Sbjct: 237 SDMADKNLNKITLG-GYVAFIQHYFVSAWVPMQDQSNT--LYSLITKSNAAIIGVKDEAV 293 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I G T T + G KE + P ++ +D+GW +FI++P+F+L+ + + Sbjct: 294 NIQAGSEQTLTATYYMGPKESDVLEAIH-----PDLDLTVDYGWLWFISQPLFVLLKWLH 348 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +++GN+G+AI+ T+ VK L +PL K QY S A M+ +QPK+ L+EKF Q +A Sbjct: 349 SILGNWGVAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMAALKEKFGD-DRQKFGQA 407 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +++YK +NP+ GC+PILLQ+P+F A++ V S E+RHA F W+ DL+A DP Sbjct: 408 TMEMYKKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFIFWLTDLSAKDPYY-- 465 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 + PI+ SMFI K+ P D Q ++ +MPV+F Sbjct: 466 -----------------VLPILFGASMFITQKLQPMTVTDPMQQKMMTFMPVIFSVFFLW 508 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+ISIVQ +I + + Sbjct: 509 FPSGLVLYWLVSNLISIVQMLIIYRGMEKK 538 >gi|300719144|ref|YP_003743947.1| Inner membrane protein [Erwinia billingiae Eb661] gi|299064980|emb|CAX62100.1| Inner membrane protein [Erwinia billingiae Eb661] Length = 548 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 137/574 (23%), Positives = 245/574 (42%), Gaps = 57/574 (9%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N F+ + +S +I AWQ + ++ + NQ Sbjct: 1 MDSQRNLFLIAFLFVSFMIWQAWQTDHAPQPVQTQTTQNTTSAAGDAANQGVP------- 53 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + +K L IN +G + L Y + S+ P L +N Sbjct: 54 -----ASGQGKTITVKTDVLTLHINTRGGDIEQAQLLTYPDKLGSSQPFQLL--ETNPGF 106 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTIS 173 Y A+ N + I + + N + +T Sbjct: 107 LYQAQSGLTGRNGPDNPANGARPLFTTTQDSFEMADGQSELRIPMTYTAENGATYTKTFV 166 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227 L + + V N + + + G++ + T +N F + A Sbjct: 167 LKRGEFAINVDYQVNNTTQQPLEMAMFGQLKQTIDLPKHRDTGSNNFALHTFRGAAYSSS 226 Query: 228 S--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + K+ I + + +N W+ + +Y+A+ ++P + + G+ Sbjct: 227 ETNYEKYKFDKISDNENLSTTTNNGWVAMLQQYFATAWVPRTNG--TNTLYTSNLGNGIA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI PG L+ G + + P ++ +D+GW +FI++P Sbjct: 285 AIGYKSAPVTIAPGAQQNLAATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 340 LFKLLKFLHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERI-G 398 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL Sbjct: 399 EDKQRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMGSIELRHAPFALWIHDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I PI+M ++MF KMSP D Q I+ +MP Sbjct: 459 SAQDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMP 499 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 V+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 VIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|260870436|ref|YP_003236838.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O111:H- str. 11128] gi|257766792|dbj|BAI38287.1| cytoplasmic insertase into membrane protein, Sec system [Escherichia coli O111:H- str. 11128] Length = 548 Score = 331 bits (849), Expect = 2e-88, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QHISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|315292865|gb|EFU52217.1| membrane protein insertase, YidC/Oxa1 family protein [Escherichia coli MS 153-1] Length = 548 Score = 331 bits (849), Expect = 2e-88, Method: Composition-based stats. Identities = 140/572 (24%), Positives = 251/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PYLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|153209754|ref|ZP_01947492.1| Inner membrane protein oxaA [Coxiella burnetii 'MSU Goat Q177'] gi|212217713|ref|YP_002304500.1| 60 kDa inner membrane protein [Coxiella burnetii CbuK_Q154] gi|254772770|sp|B6J8U7|OXAA_COXB1 RecName: Full=Inner membrane protein oxaA gi|120575257|gb|EAX31881.1| Inner membrane protein oxaA [Coxiella burnetii 'MSU Goat Q177'] gi|212011975|gb|ACJ19355.1| 60 kDa inner membrane protein [Coxiella burnetii CbuK_Q154] Length = 566 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 135/577 (23%), Positives = 245/577 (42%), Gaps = 45/577 (7%) Query: 1 MERNWNYFVAIA---LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + + L++ + AWQ Y E+ ++ Sbjct: 1 MDI-KRIILYVIVALLAIALFNAWQRDYPPTPKPTPTVEQPTANGDHPTAYTPPAFTPGA 59 Query: 58 IDDRAQA--------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + +A + + + ++ L I+ +G L Y + + V Sbjct: 60 AEKTKKAGTIALTSKVPEARLITVRTDVLDVEIDTQGGNIVSAKLPKYPVSLEEKQTPVQ 119 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 +LS Y A+ + + + ++L + + +L Sbjct: 120 ILSGE-PNELYVAQSGLTNGNGQPTTVQFESAKKQYVLENGQNQLIVQLTGRAPDGLLVT 178 Query: 170 RTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 +T + + Y + V NN+ + S +I R +P T + F V+ A +G Sbjct: 179 KTYTFHRDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHFYVRSYNGASMGSPQ 238 Query: 229 --LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHA 283 + Y ++K +I +S W+ + Y+ S ++P + + ++ S Sbjct: 239 TPYEKLSYESLDKQNIDRTSQS-GWIAMQQHYFLSAWVPGNPELTYHYYSHVIPASGEPN 297 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y F + ++ + G T L+ G + + P E ID+GW + I+ Sbjct: 298 VYVVGFVSPQMNVAAGSEAATHATLYVGPEIAKRLKGLA-----PGLERTIDYGWLWPIS 352 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +F ++S + +V N+G +I++TT+ +K++F+ + K + S A M+ +QP+I L+E+ Sbjct: 353 MLLFWILSAVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARMREMQPRIQALKERH 412 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q L +A ++LY+ INPL GC P+L+Q+PVF A Y VI S+++R APF WI Sbjct: 413 GD-DRQALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIESVQLRQAPFIFWIH 471 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I PIIM LSM Q +SP D Q ++ + Sbjct: 472 DLSVKDPYY-------------------ILPIIMGLSMLAQQWLSPTSPDPTQQKMMWIL 512 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 PV+F +FPAGL++YW +NV+ +QQ + K + Sbjct: 513 PVIFTVFFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549 >gi|82779235|ref|YP_405584.1| putative inner membrane protein translocase component YidC [Shigella dysenteriae Sd197] gi|123561063|sp|Q329B2|OXAA_SHIDS RecName: Full=Inner membrane protein oxaA gi|81243383|gb|ABB64093.1| 60 KD inner-membrane protein [Shigella dysenteriae Sd197] Length = 548 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 250/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ + P + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWSPHNDGTNN--FYTANLGNGIAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|33151313|ref|NP_872666.1| putative inner membrane protein translocase component YidC [Haemophilus ducreyi 35000HP] gi|38502923|sp|Q7VPM2|OXAA_HAEDU RecName: Full=Inner membrane protein oxaA gi|33147533|gb|AAP95055.1| 60 kDa inner-membrane protein [Haemophilus ducreyi 35000HP] Length = 536 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 144/566 (25%), Positives = 256/566 (45%), Gaps = 40/566 (7%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M N + V + +S +I WQ + E ++ Q+ P+ + + A Sbjct: 1 MNSNRSLLVMGLLLVSFLIFTQWQQDFNP---EIQAQKQAQQQSRDVPHATNTANAIT-- 55 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + ++ + +++ L I+ G + +L + + S P+ L + Sbjct: 56 ----EHMTKGKTITVESDVLRLVIDTLGGDVIESDLLAHKASLDSTDPLKLLTTEGLIYT 111 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 A + +I + + + + F+ + + Y Sbjct: 112 AQSGLVGKNGIDTHIGRAPYQVTQDHFTLAKGQNEIVVPMTFEQDGVMYTKTFTLKRGSY 171 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 + + NNS + I P G+I ++ N A ++ ++ D Sbjct: 172 DVAVSFDIQNNSANTIEVQPYGQIKHSLLDSSGNLAMPTYTGGAYSSSETNYKKYSFDEM 231 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + N W+ + Y+ S ++P+++ S + + + T+ P Sbjct: 232 TKANLNIDTKGGWVALLQHYFVSAWVPNQDASNTLYSRTHNG---VATIGYRGPITTVKP 288 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 T T+ L+ G K+ + E+ +D+GW +FIAKP+F L+ + ++++G Sbjct: 289 NTKTTITSQLWTGPKDQKEMAQAAT-----HLELTVDYGWAWFIAKPLFWLLIFIHSIIG 343 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AIM T+ VK L +PL K QY S A M+ +QPK+ ELRE++ Q+ + M++L Sbjct: 344 NWGLAIMGVTLVVKSLLYPLTKAQYTSMAKMRMLQPKLQELRERYGDDRQQM-SQEMMKL 402 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP+ GC P++LQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP IF Sbjct: 403 YKQEKVNPMGGCLPLILQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYYIF---- 458 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 P++M LSMF+ KMSP AD Q ++ +MPV+F FP+G Sbjct: 459 ---------------PVLMGLSMFLLQKMSPTAVADPTQLKVMTFMPVIFTVFFLWFPSG 503 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563 L++YW SN I+IVQQ +I + + Sbjct: 504 LVLYWLTSNCITIVQQWLIYRNLEKK 529 >gi|154706390|ref|YP_001423626.1| 60 kDa inner membrane protein [Coxiella burnetii Dugway 5J108-111] gi|189036347|sp|A9KBT1|OXAA_COXBN RecName: Full=Inner membrane protein oxaA gi|154355676|gb|ABS77138.1| 60 kDa inner membrane protein [Coxiella burnetii Dugway 5J108-111] Length = 566 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 135/577 (23%), Positives = 245/577 (42%), Gaps = 45/577 (7%) Query: 1 MERNWNYFVAIA---LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + + L++ + AWQ Y E+ ++ Sbjct: 1 MDI-KRIILYVIVALLAIALFNAWQRDYPPTPKPTPTVEQPTANGDHPTAYTPPAFTPGA 59 Query: 58 IDDRAQA--------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + +A + + + ++ L I+ +G L Y + + V Sbjct: 60 AEKTKKAGTIALTSKVPEARLITVRTDVLDVEIDTQGGNIVSAKLPKYPVSLEEKQTPVQ 119 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 +LS Y A+ + + + ++L + + +L Sbjct: 120 ILSGE-PNELYVAQSGLTNGNGQPTTVQFESAKKQYVLENGQNQLIVQLTGRAPDGLLVT 178 Query: 170 RTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 +T + + Y + V NN+ + S +I R +P T + F V+ A +G Sbjct: 179 KTYTFHRDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHFYVRSYNGASMGSPQ 238 Query: 229 --LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHA 283 + Y ++K +I +S W+ + Y+ S ++P + + ++ S Sbjct: 239 TPYEKLSYESLDKQNIDRTSQS-GWIAMQQHYFLSAWVPGNPELTYHYYSHVIPASGEPN 297 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y F + ++ + G T L+ G + + P E ID+GW + I+ Sbjct: 298 VYVVGFVSPQMNVAAGSEAATHATLYVGPEIAKRLKGLA-----PGLERTIDYGWLWPIS 352 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +F ++S + +V N+G +I++TT+ +K++F+ + K + S A M+ +QP+I L+E+ Sbjct: 353 MLLFWILSSVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARMREMQPRIQALKERH 412 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q L +A ++LY+ INPL GC P+L+Q+PVF A Y VI S+++R APF WI Sbjct: 413 GD-DRQALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIESVQLRQAPFIFWIH 471 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I PIIM LSM Q +SP D Q ++ + Sbjct: 472 DLSVKDPYY-------------------ILPIIMGLSMLAQQWLSPTSPDPTQQKMMWIL 512 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 PV+F +FPAGL++YW +NV+ +QQ + K + Sbjct: 513 PVIFTVFFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549 >gi|88705404|ref|ZP_01103115.1| Inner membrane protein oxaA [Congregibacter litoralis KT71] gi|88700494|gb|EAQ97602.1| Inner membrane protein oxaA [Congregibacter litoralis KT71] Length = 580 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 149/600 (24%), Positives = 266/600 (44%), Gaps = 71/600 (11%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYP----RIEEMNNERKNIQTVKQP-------- 46 M+ + + LS +++ W NF E + Q+ +P Sbjct: 1 MDIQRTLLIGAIMLLSFMLLTEWVNFKAVKDDVISTETRLTAGPDTQSSNKPITGMTDTG 60 Query: 47 ---------------------NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLK 85 V + D + + + +++ SL +I+LK Sbjct: 61 DLPSAAAAPAVAEPTIGIEDIPAVGAAVDTSTEDTGSGSGNNGNIIQVYTDSLQLAIDLK 120 Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145 G ++ L + D+ LL +N++ Y A+ + +N Sbjct: 121 GGDIVEVALPKFLADIDDPDTPFVLL-ENNSRRVYVAQSGLIGKNGIDSKARANYQSTAS 179 Query: 146 SGKI-LTPTTPIKLVFKNANNILFERTI-SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM 203 ++ T + L + N I + L + Y+ + + N S + + + G+I Sbjct: 180 RYEMGAADTLEVDLTWSNDAGIEVTKRFRFLRDSYVVDVDFIINNQSSEAWQGNLFGQIK 239 Query: 204 RHKP-----QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKY 258 R + G + D + + D++ + W+ + Y Sbjct: 240 RDSSAADSGGGGSMGMQPFLGAATTMPDDRFKKFSFEDMQDDPFREQNIG-GWIAMIQHY 298 Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 + S +IP+ E + + + G A F++ + + PG + +AG K+ ++ Sbjct: 299 FLSAWIPNPEKTHTYSTRVTNSGFN--IAGFTSPAVVVAPGAQQEVSARFYAGPKDQYSL 356 Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 P E+ +D+GW +++A+P+F L++ + +VGN+G+AI+L TV +K +FF L Sbjct: 357 QEIS-----PFLELSVDYGWLWWVAQPLFWLLTKIFAVVGNWGVAIILLTVLIKAVFFKL 411 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 + Y S ANM+ +QPK+ ++RE++ Q +AM++LYK INP+ GC PIL+Q+P Sbjct: 412 SATSYKSMANMRRVQPKMADIREQYADDK-QKQSQAMMELYKKEKINPMGGCLPILVQMP 470 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 VF A+Y ++ S+E+RHAPF WI DL+ DP + P++M Sbjct: 471 VFIALYWMLMESVELRHAPFMLWIDDLSVMDPYF-------------------VLPLMMG 511 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 SMF K++PPP D QA I+ W+PV+F F FPAGL++YW +N++S+ QQ VI + Sbjct: 512 ASMFFMQKLNPPPPDPMQAKIMQWLPVIFTFFFLWFPAGLVLYWVVNNLLSMAQQYVITR 571 >gi|88860620|ref|ZP_01135257.1| preprotein translocase [Pseudoalteromonas tunicata D2] gi|88817215|gb|EAR27033.1| preprotein translocase [Pseudoalteromonas tunicata D2] Length = 545 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 141/570 (24%), Positives = 238/570 (41%), Gaps = 38/570 (6%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME F+ I L S ++ W N Y + + + + ++ Sbjct: 1 MESQR-TFLFIGLLLVSFLLFQEWNNDYNPQQQAVQSASTQVKDATQSTGDTFIPSSSDS 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + L ++ KG + +L Y + P + L T Sbjct: 60 SVPGQIQRPSQSYISVTTDVLKVKLDTKGGDIVEADLIQYPEKQHGDVPFMLL--GEFTG 117 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNANNILFERTISLD 175 N YF++ + V++ I L + + I F +T Sbjct: 118 NQYFSQSGLIGIDGPDASQQGRPVYSAEQQSYTLANDELRIPLTYVSDAGIEFVKTYVFK 177 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 Y + T+ N S + ++ R + GF +K + + Sbjct: 178 KGDYAVDVEYTINNKSANPATVQLFTQVKRTIQAKGSMVDQSYLGFAYGAFEKPYEKYSF 237 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 SDIE ++S ++ Y+ S ++P ++ + LSD A Sbjct: 238 SDIEDKNLS-IDTQGGYISFIQHYFVSAWVPKQDEQNTIYSRKLSDNSAM--MGIKGPLT 294 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G+ + + G K+ + D + +D+G +FI++P+F L+ + Y Sbjct: 295 TIEAGQQQQLASTYYMGPKDQEALKALHDD-----LHLTVDYGILWFISQPLFALLKWLY 349 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 L+GN+G+AI+ T+ VK +PL K QY S A M+N+QPKI L+EK Q +A Sbjct: 350 ALLGNWGLAIISITIIVKTFLYPLTKAQYTSMAKMRNLQPKIMALKEKH-GEDKQKFGQA 408 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M+++Y+ +NP+ GC+P+LLQ+P+F A++ V S+E+RHA F WI DL+A DP Sbjct: 409 MMEMYRKEKVNPMGGCFPLLLQMPIFLALFYVFLESVELRHAEFGLWIMDLSAKDPYY-- 466 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I PI+ SMF+ K+ P D Q ++ +MPV+F Sbjct: 467 -----------------ILPILFGASMFLTQKLQPMTVTDPMQQKMMTYMPVIFSVFFLW 509 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+ISI Q +I + + Sbjct: 510 FPSGLVLYWLVSNLISIAQMLIIYRGMEKK 539 >gi|50086619|ref|YP_048129.1| putative inner membrane protein translocase component YidC [Acinetobacter sp. ADP1] gi|49532593|emb|CAG70307.1| Inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase [Acinetobacter sp. ADP1] Length = 583 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 138/585 (23%), Positives = 242/585 (41%), Gaps = 64/585 (10%) Query: 11 IALSVIIVYAWQNFYVYPRIEEMNNERK------------NIQTVKQPNQVDNSYAAVLI 58 + +++ AWQ Y + + T + V + A Sbjct: 14 FVTAYLLILAWQKDYGHANTAVQPQAAAVVSHDVSADLPNSQSTAAASSDVPQANIAAQQ 73 Query: 59 DDRAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A + + S + + ++ IN KG + L + +S+ P V L S+ K Sbjct: 74 TPAATSTAASQQLISIQTDLYHLWINPKGGDIVRIELLNHDQSKNSDQPFVML--ESDAK 131 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK---------------LVFKN 162 Y A+ + V+++ + Sbjct: 132 RTYVAQSGLIGLNGPDSSRGGRPVFDVEKSAYTLTDAKETKDKDGKLVKTLTVPMVYKTT 191 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQE 218 + +R Y + V N S + G+I R + F + Sbjct: 192 DGVEIIKRFTFKQGDYPIVVSYQVVNRSPQNWQGQMFGQIKRDNSEDPGKSDQGIFTLGT 251 Query: 219 GFIAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK--ETSFHSQ 274 G + K+++ ++ W+ + Y+ S +IP + ++ ++ Sbjct: 252 FLGGAWGTPEEHYNKLKFANFSDEKLN-VEAKGGWVAMVQHYFVSAWIPGHFGDQAYTAK 310 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 + F++ I + GK++T ++G K + + Sbjct: 311 LESRKSADNMNIIGFTSPTINVPAGKTMTVDATFYSGPKIQSELKDLAV-----GLNQTV 365 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GW + IAK +F+ + +F+N+VGN+G +I+L TV VKL+ +PL+ K Y S A M+ I P Sbjct: 366 DYGWLWPIAKLLFIGLQFFHNIVGNWGWSIILLTVLVKLILWPLSSKSYRSMAKMRVIAP 425 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 ++ ++E+F + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+R Sbjct: 426 EMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELR 484 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 HAP+ WI+DL+A DP I P++M +MFIQ ++P PAD Sbjct: 485 HAPWMLWIQDLSAMDPWF-------------------ILPLLMGATMFIQQMLNPQPADP 525 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 QA + MP++F + FPAGL++YW +N I+I QQ I K Sbjct: 526 MQAKVFRIMPIIFTVFMLFFPAGLVLYWIVNNTITITQQWFINKS 570 >gi|118582022|ref|YP_903272.1| 60 kDa inner membrane insertion protein [Pelobacter propionicus DSM 2379] gi|166975879|sp|A1AV44|OXAA_PELPD RecName: Full=Inner membrane protein oxaA gi|118504732|gb|ABL01215.1| protein translocase subunit yidC [Pelobacter propionicus DSM 2379] Length = 542 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 147/561 (26%), Positives = 251/561 (44%), Gaps = 26/561 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME +A+ LS+ + Y + + ++ + + V V Sbjct: 1 ME--KRTLLAVILSITVFYVFSLLFAPEKKPVQPESTGQAVSAPVSAGQPVAGGVQPSAS 58 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + V ++ +G L L+ Y ++ V L S ++ Sbjct: 59 APSLPATAQQQDVTVRTGLYTAVFCSRGGALKSLTLKNYREKNLPDAQAVVLGSDADPSA 118 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EH 177 ++ N+ + + + + + Sbjct: 119 L---TFSTRASGFNLPEGAPFVADATAVTMAGGEKKQLVFTHNSGQGFTVRKIYTFSGDS 175 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y K+ V NN + + + + A ++ E + L + +E Sbjct: 176 YGIKLDTQVFNNMAVPLVGTVQQVMTYPGLVKAKDS--RFETAGSYLFSDNSLESDKLKD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 S+ + ++ W G +DKY+ + + + + + +G ++ S+ IT+ Sbjct: 234 VSSASKLYDKNLQWSGFADKYFLTAILSEGGSIASVELR--KNGAGFLESTVSSPRITVT 291 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PG+S+T + LF G K+ + E +D GWF IAKP+ + YFY V Sbjct: 292 PGQSVTVVHRLFVGPKDIDILKAQGNS-----LEQSLDLGWFTVIAKPLLYTLKYFYRYV 346 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G+AI++ T+ +K LFFPL K Y S +M+ IQP + L+EK+K + + KA+++ Sbjct: 347 GNYGVAIIIITIILKALFFPLTHKSYKSMKDMQKIQPMMAALKEKYKD-DREGMNKAVME 405 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LY+ H +NPL GC P+L+QIPVFFA+YK + S+E+RHAPF+ WI DL+ D LF Sbjct: 406 LYRDHKVNPLGGCLPMLVQIPVFFALYKALMFSIELRHAPFYFWITDLSGPD-----NLF 460 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 G + +G P++M +MFIQ KM+P D QA ++ +PVVF F +FP+G Sbjct: 461 GQMLGLP---FVIGPLPLLMGATMFIQQKMTPSTMDPMQAKMMLALPVVFTFMFLNFPSG 517 Query: 538 LIIYWSWSNVISIVQQAVIMK 558 L++YW +N+++I QQ I K Sbjct: 518 LVLYWLLNNILTIGQQMYINK 538 >gi|30065013|ref|NP_839184.1| putative inner membrane protein translocase component YidC [Shigella flexneri 2a str. 2457T] gi|30043274|gb|AAP18995.1| 60 KD inner-membrane protein [Shigella flexneri 2a str. 2457T] Length = 548 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 250/572 (43%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y +++S P L ++ + Y Sbjct: 51 GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T L Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + + PG++ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A Sbjct: 402 -QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++M KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGVTMLFIQKMSPTTVTDPMQQKIMTFMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 533 >gi|307246347|ref|ZP_07528425.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255333|ref|ZP_07537145.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259783|ref|ZP_07541503.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852757|gb|EFM84984.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861720|gb|EFM93702.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866173|gb|EFM98041.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 533 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 138/554 (24%), Positives = 252/554 (45%), Gaps = 32/554 (5%) Query: 11 IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPR 70 + +S +I WQ + E ++ Q D A+ A+ + Sbjct: 4 LLVSFLIFTQWQQDFNP---EIQAQKQAQQQAQVASQSGDVPAASNANTVIAENATQGKT 60 Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 V L++ L +I+ G +L ++ +++S +P L + + T A + Sbjct: 61 VTLQSDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATTYVAQSGLVGKNGID 120 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190 N P + + + F+ + + + Y + V N + Sbjct: 121 TNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFVLKRGSYDVAVNFNVKNQT 180 Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250 + P G+I +++ + A ++ ++ + + + + Sbjct: 181 AATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDMEKANLDINTKAG 240 Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W+ + Y+ S ++P+++ + + + TI P T T+ L+ Sbjct: 241 WVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGPVTTIAPNSEATITSQLWT 297 Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 G K+ + + ++ +D+GW +FIAKP+F L+++ ++V N+G+AI+ T+ Sbjct: 298 GPKDQKEMEATAAN-----LDLTVDYGWVWFIAKPLFALLTFIQSIVTNWGLAIIGVTIV 352 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 VK + +PL K QY S A M+ +QPKI E+RE+F Q + + M++LYK +NP+ GC Sbjct: 353 VKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMSQEMMKLYKEEKVNPMGGC 411 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 412 LPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------------------ 453 Query: 491 GIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 I P++M SMF+ KMSP P D Q ++ +MPV+F FP+GL++YW SN+I+ Sbjct: 454 -ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSGLVLYWLTSNIIT 512 Query: 550 IVQQAVIMKMHGAE 563 IVQQ +I + + Sbjct: 513 IVQQWLIYRNLEKK 526 >gi|307250692|ref|ZP_07532629.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307257502|ref|ZP_07539268.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306857300|gb|EFM89419.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306864014|gb|EFM95931.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 533 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 138/554 (24%), Positives = 252/554 (45%), Gaps = 32/554 (5%) Query: 11 IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPR 70 + +S +I WQ + E ++ Q D A+ A+ + Sbjct: 4 LLVSFLIFTQWQQDFNP---EIQAQKQAQQQAQVASQSGDVPAASNANTVIAENATQGKT 60 Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 V L++ L +I+ G +L ++ +++S +P L + + T A + Sbjct: 61 VTLQSDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATTYVAQSGLVGKNGID 120 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190 N P + + + F+ + + + Y + V N + Sbjct: 121 TNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFVLKRGSYDVAVNFNVKNQT 180 Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250 + P G+I +++ + A ++ ++ + + + + Sbjct: 181 AATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDMEKANLDINTKAG 240 Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W+ + Y+ S ++P+++ + + + TI P T T+ L+ Sbjct: 241 WVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGPVTTIAPNSEATITSQLWT 297 Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 G K+ + + ++ +D+GW +FIAKP+F L+++ ++V N+G+AI+ T+ Sbjct: 298 GPKDQKEMEATAAN-----LDLTVDYGWAWFIAKPLFALLTFIQSIVTNWGLAIIGVTIV 352 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 VK + +PL K QY S A M+ +QPKI E+RE+F Q + + M++LYK +NP+ GC Sbjct: 353 VKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMSQEMMKLYKEEKVNPMGGC 411 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 412 LPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------------------ 453 Query: 491 GIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 I P++M SMF+ KMSP P D Q ++ +MPV+F FP+GL++YW SN+I+ Sbjct: 454 -ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSGLVLYWLTSNIIT 512 Query: 550 IVQQAVIMKMHGAE 563 IVQQ +I + + Sbjct: 513 IVQQWLIYRNLEKK 526 >gi|146328851|ref|YP_001209838.1| preprotein translocase subunit YidC [Dichelobacter nodosus VCS1703A] gi|146232321|gb|ABQ13299.1| preprotein translocase subunit YidC [Dichelobacter nodosus VCS1703A] Length = 544 Score = 331 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 143/573 (24%), Positives = 259/573 (45%), Gaps = 43/573 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + + + WQ + V R E++ + Q + + Sbjct: 1 MKGNLRVVLYTLAAGLFFILWQRWQVANRPVEVS---PTLPVASQTVKKTETLDQQPPIS 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ++ RV +K L + + +GA + L Y + + SP+ L + + ++ + Sbjct: 58 ASETSEAPDRVRVKTDVLDIAFSTQGASIVEAKLLNYAFTIDNKSPLTLLHAENPSRMVF 117 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTT----PIKLVFKNANNILFERTISL-D 175 + L + + PN + W + + P + +++ + + F +T + Sbjct: 118 QSGLV---SQSGTTAPNHFSQWKSAQKEYVLPDDAEHISVPFTWEDEHGVRFTKTFTFHR 174 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN--TFGVQEGFIAVLGDKSLVEQK 233 Y F+I +TV N S + +I + G + + + + Sbjct: 175 GTYRFEIEETVENQSERPWQGFAYRQIAFGEAAKMGGLGQVATFTGAVTSSEENRYNKIE 234 Query: 234 YSDIEKSSISNFHE--SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 DI + + +E W+ + Y+ + +P +Y + + Sbjct: 235 LKDIASAKKAKLNEVTQTGWVAMMQHYFLAAVVPQSGVENRLYTQYDNGD---HIVGTHD 291 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 E+TI P + + + G K + P + ID+G+ + I++ MF +M+ Sbjct: 292 KEVTIAPRDTHHFKSTGYIGPKISKNLSAIA-----PYLDKTIDYGYLFMISQLMFHVMT 346 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + Y ++GN+G AI++ T+ +K LFF + Y S A M+ +QP+I+ L+ ++ Q Sbjct: 347 FIYTVIGNWGGAIIVMTLLIKCLFFVPSAWAYKSMAKMRALQPEINRLKAQY-GEDKQAF 405 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +AM+QLY+ +NP +GC P+LLQIP F A Y V++ S+E+RHAP+ GWI+DL++ DP Sbjct: 406 SQAMMQLYRDRKVNPASGCLPMLLQIPFFIAFYWVLAESVELRHAPWIGWIQDLSSMDPL 465 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 I PII + MF+Q K++PPP D QA ++ MP+VF F Sbjct: 466 Y-------------------ILPIINAALMFLQQKLNPPPPDPTQAKVMMMMPLVFGFMF 506 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 FP+GL++YW+ SN SIVQQ V+ K +G + Sbjct: 507 MWFPSGLVLYWTMSNAFSIVQQYVMNKRYGQRV 539 >gi|288942814|ref|YP_003445054.1| membrane protein insertase, YidC/Oxa1 family domain-containing [Allochromatium vinosum DSM 180] gi|288898186|gb|ADC64022.1| membrane protein insertase, YidC/Oxa1 family domain containing [Allochromatium vinosum DSM 180] Length = 554 Score = 331 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 145/573 (25%), Positives = 254/573 (44%), Gaps = 45/573 (7%) Query: 1 MERNWNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKN------IQTVKQPNQVDN 51 M+ F+ +AL+ ++ W Y P + E+ + + + V Sbjct: 1 MDNQR-LFLFLALAAVLFLIYESWMQDYGRPAQLPVAQEQAQGAPGVPVPSANEIPTVST 59 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + AV A + ++ L I+ +GA L Y + LL Sbjct: 60 TPGAVPDGATLSAALDETPIRVETDVLRLEISPRGATIASAWLLDYAVVPERPDDKFQLL 119 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILF 168 P N + + + ++ + + S + T + L + N + Sbjct: 120 KPV-PPNMFVVQSGLLGEKPDLLPTHEAIFTSAQSQYALQPGTDRLDVTLEWTNDAGVRV 178 Query: 169 ERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLG 225 ++ + YL + V N + + ++ R + T G + Sbjct: 179 KKIYTFTRGSYLIESRQVVENQTGAPLVARAYNQLQRTELYDPNETRFISTFTGGVYYSP 238 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 ++ + DI K + W+ + Y+ + ++P + F + +RY Sbjct: 239 EEKYKKVSLEDIAKGKLDLTVTD-GWIAMMQHYFLAAWVP--PRAVAETFYTNALNGSRY 295 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + ++I G + N LF G K T+ P E+ +D+GW IAKP Sbjct: 296 IIGKYSPPVSIASGATHAFENQLFVGPKLLSTLEDIA-----PGLELAVDYGWLTVIAKP 350 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 ++ ++S+ + +VGN+G AI++ T+ +KL F+ L++ Y S A+M+ I P++ L++++ Sbjct: 351 IYWMLSWIHAVVGNWGWAIIVLTILIKLAFYKLSETSYRSMAHMRQITPRLQALKDRYGD 410 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q L +AM++LYKT INPL GC PIL+QIPVF A+Y V+ S+EMR APF W+ +L Sbjct: 411 DK-QRLNQAMMELYKTEKINPLGGCLPILVQIPVFIALYWVLLESVEMRQAPFVLWLNNL 469 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 +A DP I P+IM +SMF+Q K++P P D QA I+ +P Sbjct: 470 SAPDPYF-------------------ILPLIMGVSMFVQQKLNPAPPDPLQAKIMMSLPF 510 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 VF + FP+GL++YW+ +N++SI QQ I + Sbjct: 511 VFTVFFAFFPSGLVLYWTVNNLLSIAQQWKITR 543 >gi|56461737|ref|YP_157018.1| preprotein translocase subunit YidC [Idiomarina loihiensis L2TR] gi|56180747|gb|AAV83469.1| Preprotein translocase subunit YidC [Idiomarina loihiensis L2TR] Length = 530 Score = 331 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 139/541 (25%), Positives = 239/541 (44%), Gaps = 34/541 (6%) Query: 28 PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPR-VELKNPSLIGSINLKG 86 P N + P+ A V D+ + V ++ L I+ +G Sbjct: 11 PENVTSTQSSNNAENSDVPSGSSAVSADVPESDQPVVAQRAETTVHVRTDVLDVEIDTRG 70 Query: 87 AQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLI 145 +L + S L + SN N Y A+ + + + + + Sbjct: 71 GDVVSTHLLKFAKTQGSEERFQLLQNSSN--NVYVAQSGLIGPDGIDGKDGRPSYNYEQE 128 Query: 146 SGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMR 204 S + + + L + N ++ + + Y + V NN+ + G++ R Sbjct: 129 SYESTSEVIEVPLTYTAENGAVYRKVFTFTPGKYTVDVRYEVENNTSKTLETQFYGQLKR 188 Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKY-SDIEKSSISNFHESNSWLGISDKYWASVF 263 + + + F A +KY D + N W+G+ + Y+ S + Sbjct: 189 SVHSGESGSMIMPTYFGAAYSYDEDKFEKYDFDSMQDKKLNVTSQTGWVGMLEHYFVSAW 248 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 +P + + + A I PG S T + +F G K+ + Sbjct: 249 VPKQGQQNRLYSRVANGSQA--IIGVIYPMTDIQPGSSKTIESQVFLGPKDQDAMAEV-- 304 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 + ++ +D+G+ +++A+P+F L+ + ++V N+G+AI+LTTV VK L FPL K QY Sbjct: 305 ---VEYLDLTVDYGFLWWLAQPIFKLLQFLQSIVINWGLAIILTTVIVKALLFPLTKAQY 361 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 VS A M+ +QPK+ LRE++ Q + AM++LYK +NPL GC P+LLQ+P+F A+ Sbjct: 362 VSMAKMRMLQPKMTALRERYGD-DRQKMSGAMMKLYKEEKVNPLGGCLPMLLQLPIFLAL 420 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y V+ S+E+RH+ F WI+DL+ DP I PI+M SMF+ Sbjct: 421 YWVLLESVELRHSAFVFWIQDLSTKDPYY-------------------ILPILMGASMFL 461 Query: 504 QMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ P P D Q + +MPV+F FP+GL++YW SN+I+I Q +I + Sbjct: 462 MQRLQPTPTADPMQQKLFQYMPVIFTVFFLWFPSGLVLYWLVSNLITIAQMLIIYRGLEK 521 Query: 563 E 563 + Sbjct: 522 K 522 >gi|304398072|ref|ZP_07379947.1| membrane protein insertase [Pantoea sp. aB] gi|304354358|gb|EFM18730.1| membrane protein insertase [Pantoea sp. aB] Length = 548 Score = 331 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 244/572 (42%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N F+ IA + WQ + + Q Q NS A Sbjct: 1 MDSQRNLFL-IAFLFVTFMIWQAW---------QTDHAPQPQQTQTTQGTNSVAGDAASQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L + + S+ P L + Y Sbjct: 51 GVPASGQGQTITVKTDVLSLNINTRGGDVEQAQLLTFPDKLGSDQPFQLL--ETTPAFLY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + N +++ +T Sbjct: 109 QAQSGLTGRNGPDNPNNGARPLFNAAQNHFEMADGQSELRVPMTYTAENGVVYTKTFIFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGF--IAVLGDK 227 Y + V N + + S G++ + T +N F + + Sbjct: 169 RGEYAVNVDYHVNNTTQQPLEVSLFGQLKQTIDLPKHRDTGSNNFALHTFRGAAYSTSES 228 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N SN W+ + +Y+A+ ++P T + + G+ Sbjct: 229 KYEKYKFDTIADNENLNATTSNGWVAMLQQYFATAWVPR--TEGTNTLYTSNLGNGVAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + +TI G L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSAPVTIAAGAQQNLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+A Sbjct: 402 -QKQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFVLWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGITMFFIQKMSPTTVTDPMQQKIMTYMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|264680932|ref|YP_003280842.1| inner membrane insertion protein [Comamonas testosteroni CNB-2] gi|262211448|gb|ACY35546.1| inner membrane insertion protein [Comamonas testosteroni CNB-2] Length = 570 Score = 331 bits (847), Expect = 3e-88, Method: Composition-based stats. Identities = 135/587 (22%), Positives = 244/587 (41%), Gaps = 50/587 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNERKNIQTVKQPNQVD 50 M + + +V W F+ P+ Q Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQIHNGKKPTFFPSPQTVSAPAAADVKPADVSVPQPA 60 Query: 51 NSYAAVLID-------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 + +A + A A++ V + + + + + +G L Y V Sbjct: 61 AAASAGDVPGAANAAAQPAAAVTPRQDVIVGSDVMRLTFDSEGGTLKASELLKYSDTVD- 119 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 + + N K Y + + + K + ++ + Sbjct: 120 -DKKLMQVFEENAKRVYLGQTGLIGGNFPTHKTPMTVMPGERELKDGQDSVQVRFESADQ 178 Query: 164 NNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGF 220 + +T +L Y + V N + +++R P+ + + G Sbjct: 179 GGVKLVKTFTLKRGSYAVDVQHDVVNTGSAAVNPQLYMQLVRDGNKPEHESTFYSTFTGP 238 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 K + ++ DIE SN ++ + Y+AS ++ + + + + Sbjct: 239 AVYTEAKKYHKVEFKDIENGKAEVDKASSNGYVAMVQHYFASAWLLADGIQRDNFVRKV- 297 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G Y T+ PG++ T ++ LF+G + P + P E++ D+GW Sbjct: 298 -GDNLYAVGMITPVGTVEPGQTKTVSSRLFSGPQVEPMLEKLS-----PGLELVKDYGWL 351 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +AKP++ L+S + +GN+G +I+ V +K+ F+ L K Y S A MK I P+I E+ Sbjct: 352 TILAKPLYWLLSELHKFIGNWGWSIVALVVLLKIAFYWLNAKAYSSMAKMKAINPRIQEM 411 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+ K PQ +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+E+R+AP+ Sbjct: 412 RERLKD-KPQQMQQEMMRIYREEKVNPMGGCLPIVIQIPVFMALYWVLQSSVEIRNAPWI 470 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 GWI DL+ DP I P++M+LS +Q ++P P D QA + Sbjct: 471 GWIHDLSVPDPFF-------------------ILPLLMTLSSLLQTALNPAPPDPMQAKM 511 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + MP++F FP+GL++YW +N++SI QQ +I K G Sbjct: 512 MWIMPLMFSVMFFFFPSGLVLYWLTNNILSIAQQWIINKRMGVPPQF 558 >gi|308188769|ref|YP_003932900.1| Inner membrane protein yidC [Pantoea vagans C9-1] gi|308059279|gb|ADO11451.1| Inner membrane protein yidC [Pantoea vagans C9-1] Length = 548 Score = 331 bits (847), Expect = 3e-88, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 244/572 (42%), Gaps = 53/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N F+ IA + WQ + + Q Q NS A Sbjct: 1 MDSQRNLFL-IAFLFVTFMIWQAW---------QTDHAPQPQQTQTTQGTNSVAGDTASQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L + + S+ P L + Y Sbjct: 51 GVPASGQGQTITVKTDVLSLNINTRGGDVEQAQLLTFPDKLGSDQPFQLL--ETTPAFLY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + N +++ +T Sbjct: 109 QAQSGLTGRNGPDNPNNGARPLFTTAQDHFEMADGQSELRVPMTYTAENGVVYTKTFIFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGF--IAVLGDK 227 Y + V N + + S G++ + T +N F + + Sbjct: 169 RGEYAVNVDYHVNNTTQQPLEVSLFGQLKQTIDLPKHRDTGSNNFALHTFRGAAYSTSES 228 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N SN W+ + +Y+A+ ++P T + + G+ Sbjct: 229 KYEKYKFDTIADNENLNATTSNGWVAMLQQYFATAWVPR--TEGTNTLYTSNLGNGVAAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + +TI G L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKSAPVTIAAGAQQNLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKFIHSFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+A Sbjct: 402 -QKQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSVELRHAPFILWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I PI+M ++MF KMSP D Q I+ +MPV+ Sbjct: 461 QDPYY-------------------ILPILMGITMFFIQKMSPTTVTDPMQQKIMTYMPVI 501 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 502 FTVFFLWFPSGLVLYYIVSNLVTILQQQLIYR 533 >gi|323700637|ref|ZP_08112549.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio sp. ND132] gi|323460569|gb|EGB16434.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio desulfuricans ND132] Length = 555 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 144/582 (24%), Positives = 238/582 (40%), Gaps = 50/582 (8%) Query: 1 ME--RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME +A+ LS I+++ WQ ++ RK + ++ + Sbjct: 1 MEKKEQIRLVIALVLSFIVLFGWQYLTGPSAEQKAEMARKAAEAEQKTAALTQKTQDAAE 60 Query: 59 DDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 + A + V + P +G + L+ Y + +SP V L+ Sbjct: 61 LAKEAAPVADFVPTDGVSVTVDTPLYTAVFTSQGGVLEKFILKNYRETIQKDSPFVDLVG 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF--KNANNILFER 170 P+ + ++ ++ + L F + + Sbjct: 121 PNAFAKGPLGLILTLNDKEYHTWKRGKWAFSGSDLTLAEGDGTKTLTFTGQVDGYRIERV 180 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 + YL TVTN + + + + + IA L + Sbjct: 181 LTFHPDTYLIDESATVTNLTGTGAEGALSFTAAAKSMSDEDDRYNPTK--IAYLTKDTRK 238 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 E D K W I Y+ IP E Sbjct: 239 EMTDRDDLKKDGITAPADLKWGAIESNYFLFAVIPGGE-----NASLSGGVQDDIFRMAV 293 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 ++ T +P + T F G + ++ D +++GWF F+AKP+ + + Sbjct: 294 TDKATFMPNVAKTLKTSYFVGPTDRKMLNAMPND-----LADAVNFGWFDFLAKPLLVGL 348 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++FY VGN+G+AI++ TV +KL+F+PL++K Y S MK +QP + +LREK+ Q Sbjct: 349 NFFYGFVGNYGVAIIILTVIIKLIFWPLSQKSYGSMEKMKKLQPMVAKLREKYGDDK-QR 407 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WI 462 L + + LYKT+ +NP+ GC P+++QIPVFF +YK + ++E+RHAPF W+ Sbjct: 408 LNQETMALYKTYKVNPMGGCLPMVVQIPVFFGLYKALLGAVELRHAPFIAHLPFTDLPWL 467 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+A DP I PIIM SMF+Q KM+P D Q I+ Sbjct: 468 ADLSAKDPYYIS-------------------PIIMGASMFLQQKMTPSAGDPTQQKIMLI 508 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 MP+VF F FP+GL+IYW ++N++SI QQ +I + + Sbjct: 509 MPLVFTFMFLQFPSGLVIYWLFNNLLSIGQQLMIARKSRVKT 550 >gi|121611909|ref|YP_999716.1| 60 kDa inner membrane insertion protein [Verminephrobacter eiseniae EF01-2] gi|121556549|gb|ABM60698.1| protein translocase subunit yidC [Verminephrobacter eiseniae EF01-2] Length = 567 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 128/590 (21%), Positives = 239/590 (40%), Gaps = 53/590 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYP-------------------RIEEMNNERKNIQ 41 M + + ++ W + V+ + + ++ Sbjct: 1 MNDIRRSVLWVIFGFSMILLWDKWQVHNGNRALFFPAPAPTAPAASAGARPASADAAHVP 60 Query: 42 TVKQPNQVDNSYAAVLIDDRAQALSMS-PRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 D + + A+ ++ RV+++ + + +G L + Sbjct: 61 APAAGASPDAVPGQPAVSGQPAAVPVARERVQVQTDLYRLTFDSQGGSLTHAELLEHADM 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 LL + + Y A+ + + + I+ Sbjct: 121 ADKTRRF--LLLDESAQRVYVAQTGLIGGSFPTHKTPMTALPGPRELAEGANELAIRFES 178 Query: 161 KNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQ 217 + + +T +L Y + V N + +++R P ++ + Sbjct: 179 PSQGGLKLVKTWTLRRGSYAIAVRHEVVNTGSATVSPQLYLQLVRDGNKPPGESSFYSTF 238 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFK 276 G K + ++ DIE + E + ++ + Y+A+ ++ + + Sbjct: 239 TGPAVYTDAKKYQKIEFKDIENDKVDIPKEAPDGYVAMVQHYFATAWLLADGVQRQPFTR 298 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 + Y +I PG S T LFAG + + P E++ D+ Sbjct: 299 KVD--TNLYSVGMLTPLGSIAPGASRTLDARLFAGPQVETMLETLS-----PGLELVKDY 351 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW +AKP++ L+ + L+ N+G +I+ + +K+ F+ L K Y S A MK I PKI Sbjct: 352 GWLTILAKPLYWLLEQLHKLLRNWGWSIVGLVLLLKIAFYWLNAKAYASMAKMKAINPKI 411 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E+RE+ K PQ +Q+ M+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+EMR+A Sbjct: 412 MEMRERLKD-KPQQMQQEMMRIYREEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMRNA 470 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ GWI DL+ DP I P++M+ S +Q ++P P D Q Sbjct: 471 PWIGWIHDLSTPDPLF-------------------ILPLLMTASSLLQTALNPAPPDPMQ 511 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 A ++ +MP++F FPAGL++YW +N++SI QQ +I G Sbjct: 512 AKMMWFMPLIFSVMFFFFPAGLVLYWLTNNILSIAQQWIINTRMGVPPQF 561 >gi|299530924|ref|ZP_07044338.1| inner membrane insertion protein [Comamonas testosteroni S44] gi|298721145|gb|EFI62088.1| inner membrane insertion protein [Comamonas testosteroni S44] Length = 570 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 134/587 (22%), Positives = 243/587 (41%), Gaps = 50/587 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNERKNIQTVKQPNQVD 50 M + + +V W F+ P+ Q Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQIHNGKKPTFFPSPQTVSAPAAADVKPADVSVPQPA 60 Query: 51 NSYAAVLID-------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 + +A + A A++ V + + + + + +G L Y V Sbjct: 61 AAASAGDVPGAANAAAQPAAAVTPRQDVIVGSDVMRLTFDSEGGTLKASELLKYSDTVD- 119 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 + + N K Y + + + K + ++ + Sbjct: 120 -DKKLMQVFEENAKRVYLGQTGLIGGNFPTHKTPMTVMPGERELKDGQDSVQVRFESADQ 178 Query: 164 NNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGF 220 + +T +L Y + V N + +++R P+ + + G Sbjct: 179 GGVKLVKTFTLKRGSYAVDVQHDVVNTGSAAVNPQLYMQLVRDGNKPEHESTFYSTFTGP 238 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS 279 K + ++ DIE S ++ + Y+AS ++ + + + + Sbjct: 239 AVYTDAKKYHKVEFKDIESGKAEVDKASPNGFVAMVQHYFASAWLLADGIQRDNFVRKV- 297 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G Y T+ PG++ T ++ LF+G + P + P E++ D+GW Sbjct: 298 -GDNLYAVGMITPVGTVEPGQTKTVSSRLFSGPQIEPMLEKLS-----PGLELVKDYGWL 351 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +AKP++ L+S + +GN+G +I+ V +K+ F+ L K Y S A MK I P+I E+ Sbjct: 352 TILAKPLYWLLSELHKFIGNWGWSIVALVVLLKIAFYWLNAKAYSSMAKMKAINPRIQEM 411 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+ K PQ +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+E+R+AP+ Sbjct: 412 RERLKD-KPQQMQQEMMRIYREEKVNPMGGCLPIVIQIPVFMALYWVLQSSVEIRNAPWI 470 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 GWI DL+ DP I P++M+LS +Q ++P P D QA + Sbjct: 471 GWIHDLSVPDPFF-------------------ILPLLMTLSSLLQTALNPAPPDPMQAKM 511 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + MP++F FP+GL++YW +N++SI QQ +I K G Sbjct: 512 MWIMPLMFSVMFFFFPSGLVLYWLTNNILSIAQQWIINKRMGVPPQF 558 >gi|284007059|emb|CBA72334.1| inner membrane protein [Arsenophonus nasoniae] Length = 545 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 138/573 (24%), Positives = 252/573 (43%), Gaps = 56/573 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IA + WQ + E Q +K V D Sbjct: 1 MDSQRNL-LFIAWLFVSFLIWQTW-----------ESDKTQPIKTDQIVKQMDMPSHDDQ 48 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + +K L IN +G D +L Y ++ S+ P L + + Y Sbjct: 49 ANLGHEQAKFITVKTDVLELRINTRGGDIDGADLLLYPKELHSSDPFRLLETSKD--FIY 106 Query: 121 FAELDYVSTANNIELPNSN-------TVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 A+ + +N + + + + L F + +++++ Sbjct: 107 QAQSGLIGQDGPDNPGYNNGLRPLYLSTATSYALQDGQDELRVPLTFTGKDGVVYQKVYV 166 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDK 227 L Y + + N S + + G++ + + T +N F + A Sbjct: 167 LKRGKYNISVEYNIDNKSAKPLSLAFFGQLKQTVELPKERDTGSNNFALHTYRGAAYSSD 226 Query: 228 SLVEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 +KY + N + W+ + +Y+A+ +IP + F + A Sbjct: 227 ETNYKKYSFSDITDNNLNVNSKGGWIAMLQQYFATAWIP--GYQNQNTFYTIDLDKAIAI 284 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + ++ IT+ T+ L+ G + + P ++ +D+GW +FI++P+ Sbjct: 285 IGYKSSPITVAANSKENYTSTLWVGPELQAEMAAVA-----PHLDLTVDYGWLWFISQPL 339 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + + +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ ++E+ Sbjct: 340 FKLLKFIHGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMKERIGDD 399 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + + M+ LYK +NPL GC P+L+Q+P+F A+Y ++ S+E+RHAPF GWI+DL+ Sbjct: 400 K-QRMSQEMMALYKAEKVNPLGGCLPLLIQMPIFLALYYMLMGSVELRHAPFIGWIQDLS 458 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A DP I P++M L+M+I KMSP D Q I+ +MPV Sbjct: 459 AQDPYY-------------------ILPLLMGLTMYIIQKMSPTTVTDPMQQKIMTYMPV 499 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 500 IFTVFFLWFPSGLVLYYIVSNLVTIIQQQIIYR 532 >gi|85712624|ref|ZP_01043671.1| Preprotein translocase subunit YidC [Idiomarina baltica OS145] gi|85693615|gb|EAQ31566.1| Preprotein translocase subunit YidC [Idiomarina baltica OS145] Length = 554 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 137/576 (23%), Positives = 241/576 (41%), Gaps = 42/576 (7%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNN-------ERKNIQTVKQPNQVDN 51 M + + I +S + W E +N TV Q Sbjct: 1 MNSPRSILLVAFIVVSFFLFQQWTIDTAPGTKAPQQTQQTTQQTEDQNSSTVPQSGSNTA 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + S + + L I+L G L + + S L Sbjct: 61 DTAVPESNSPNAITSNGRLITVVTDELELKIDLNGGDIVSAKLLEFAATLDSEERFQLL- 119 Query: 112 SPSNTKNAYFAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 N+ + Y A+ + + + ++ T + L + + + + Sbjct: 120 -KRNSNHIYIAQSGLIGPQGIDSNNGRAQYQAAQERYRLTGDTLEVPLTTQTESGLNVTK 178 Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 T + HY + + N S + + G++ + + + + F A Sbjct: 179 TFVIKRGHYDIGVNYAIENQSSEAAQLQFYGQLQQTMTAGESGSMIMPTYFGAAYSQDED 238 Query: 230 VEQKYS-DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 +KY D + + W+ + Y+ + ++P++ F + Sbjct: 239 KFEKYPFDDMREKKLSVTTQTGWVSMLQHYFVAAWVPTQTQQNK--FYSQVTPSNQAVIG 296 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 T+ PG S T +F G K+ + P ++ +D+G+ +++A+P+F Sbjct: 297 VLYPSTTVQPGASKTIDATIFVGPKDQDAMAKVA-----PYLDLTVDYGFLWWLAQPIFK 351 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + + V N+G+AI+L TV +K L FPL K QYVS A M+ +QPK+ LRE++ Sbjct: 352 LLQFLQSFVINWGLAIILITVIIKALLFPLTKAQYVSMAKMRLLQPKMKSLRERYGD-DR 410 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + +AM++LYK +NPL GC P+LLQ+P+F ++Y V+ S+E+RH+ F WI+DL+ Sbjct: 411 QKMGQAMMKLYKEEKVNPLGGCLPMLLQLPIFLSLYWVLLESVELRHSSFVFWIQDLSTK 470 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M +SMF+ ++ P P D Q + +MPV+F Sbjct: 471 DPYY-------------------ILPILMGISMFVMQRLQPTPATDPMQQKLFQYMPVIF 511 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+I+I Q +I K + Sbjct: 512 TVFFLWFPSGLVLYWLVSNLITITQMLIIYKGLEKK 547 >gi|239906118|ref|YP_002952857.1| inner membrane protein OxaA [Desulfovibrio magneticus RS-1] gi|259515664|sp|C4XNJ6|OXAA_DESMR RecName: Full=Inner membrane protein oxaA gi|239795982|dbj|BAH74971.1| inner membrane protein OxaA [Desulfovibrio magneticus RS-1] Length = 532 Score = 330 bits (846), Expect = 4e-88, Method: Composition-based stats. Identities = 144/570 (25%), Positives = 247/570 (43%), Gaps = 51/570 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 N +A+ALS+ ++ W + P + + Q + AA Sbjct: 1 MENKRVILAVALSLAVLVGWNFLF-PPAKQAPKPDAAVSQQDAPAQSSPAAPAAKAETLA 59 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A A + R+ + P +N G + L+ Y + +SP+V L+ A Sbjct: 60 AFAPTPGKRITIDTPLYTAVLNSTGGVLEQFALKNYRETIKPDSPLVNLIDDKAKAKAPL 119 Query: 122 AELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVFKNANNILFERTISLDEHY 178 + N N W+ G + L + + ++ + Y Sbjct: 120 GIIL------NGSPTWQNVDWSAEGGDLKLEAGAAGTVVLAGRMGDVVVKRELTFSGDSY 173 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 + +++NN +R + + A +++ + L D + Sbjct: 174 IIDEKFSLSNNGGAPLRNRLSLTVAVDRLSAADDSYNPTQAAFYGASGLDLE---SGDKK 230 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + + W + Y+ +P ++ + + + Sbjct: 231 LAEGVAPEKPMEWGAVMSNYFLVGIVPEAADLRG----KAKLEDGVFRVALDKDGLEVPA 286 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G + F G K + ++A + ID+GWF F+AKP+ L+ +FY+ VG Sbjct: 287 GGRSDLSIAYFLGPKVPKYL-----EMAPHKLVASIDYGWFDFVAKPLIKLLHFFYDYVG 341 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+L T+ +KL+F+PL++K Y S MK +QP + +LREK+K Q + + M+QL Sbjct: 342 NYGVAIILLTILIKLIFWPLSQKSYKSMDQMKKLQPLLTQLREKYKD-DRQKMNEEMMQL 400 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIKDLAAADP 470 YKT+ +NP GC P+++QIPVFF +Y+ + S+E+RHA F W+ DL+A DP Sbjct: 401 YKTYKVNPAGGCLPMIVQIPVFFGLYQALLHSIELRHASFITHLPFTNMIWLADLSAKDP 460 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I P+IM +MF+Q KM+P P D QA ++ +MPV+F F Sbjct: 461 FY-------------------ITPLIMGATMFLQQKMTPAPGDPTQAKVMLFMPVIFTFM 501 Query: 531 LSSFPAGLIIYWSWSNVISIVQQ-AVIMKM 559 +FP+GL++YW +NVISI QQ ++ K Sbjct: 502 FLNFPSGLVVYWLVNNVISIAQQGWMLNKK 531 >gi|22127984|ref|NP_671407.1| putative inner membrane protein translocase component YidC [Yersinia pestis KIM 10] gi|45443732|ref|NP_995271.1| putative inner membrane protein translocase component YidC [Yersinia pestis biovar Microtus str. 91001] gi|51598232|ref|YP_072423.1| inner membrane protein translocase component YidC [Yersinia pseudotuberculosis IP 32953] gi|108810137|ref|YP_654053.1| putative inner membrane protein translocase component YidC [Yersinia pestis Antiqua] gi|108814119|ref|YP_649886.1| putative inner membrane protein translocase component YidC [Yersinia pestis Nepal516] gi|145601170|ref|YP_001165246.1| putative inner membrane protein translocase component YidC [Yersinia pestis Pestoides F] gi|150260964|ref|ZP_01917692.1| probable membrane protein [Yersinia pestis CA88-4125] gi|153949944|ref|YP_001403098.1| inner membrane protein translocase component YidC [Yersinia pseudotuberculosis IP 31758] gi|162421152|ref|YP_001608452.1| putative inner membrane protein translocase component YidC [Yersinia pestis Angola] gi|165926088|ref|ZP_02221920.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. F1991016] gi|165939954|ref|ZP_02228491.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. IP275] gi|166009619|ref|ZP_02230517.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. E1979001] gi|166213212|ref|ZP_02239247.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. B42003004] gi|167401618|ref|ZP_02307112.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422864|ref|ZP_02314617.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425533|ref|ZP_02317286.1| inner membrane protein OxaA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170026450|ref|YP_001722955.1| putative inner membrane protein translocase component YidC [Yersinia pseudotuberculosis YPIII] gi|186897490|ref|YP_001874602.1| putative inner membrane protein translocase component YidC [Yersinia pseudotuberculosis PB1/+] gi|218931078|ref|YP_002348953.1| putative inner membrane protein translocase component YidC [Yersinia pestis CO92] gi|229839809|ref|ZP_04459968.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841894|ref|ZP_04462050.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis biovar Orientalis str. India 195] gi|229896771|ref|ZP_04511934.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis Pestoides A] gi|229904659|ref|ZP_04519770.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis Nepal516] gi|270488370|ref|ZP_06205444.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Yersinia pestis KIM D27] gi|38503118|sp|Q8Z9U3|OXAA_YERPE RecName: Full=Inner membrane protein oxaA gi|21961130|gb|AAM87658.1|AE014013_3 60 kDa inner-membrane protein [Yersinia pestis KIM 10] gi|45438602|gb|AAS64148.1| probable membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51591514|emb|CAH23186.1| Oxa1 family transporter [Yersinia pseudotuberculosis IP 32953] gi|108777767|gb|ABG20286.1| protein translocase subunit yidC [Yersinia pestis Nepal516] gi|108782050|gb|ABG16108.1| protein translocase subunit yidC [Yersinia pestis Antiqua] gi|115349689|emb|CAL22670.1| probable membrane protein [Yersinia pestis CO92] gi|145212866|gb|ABP42273.1| protein translocase subunit yidC [Yersinia pestis Pestoides F] gi|149290372|gb|EDM40449.1| probable membrane protein [Yersinia pestis CA88-4125] gi|152961439|gb|ABS48900.1| inner membrane protein OxaA [Yersinia pseudotuberculosis IP 31758] gi|162353967|gb|ABX87915.1| inner membrane protein OxaA [Yersinia pestis Angola] gi|165912080|gb|EDR30720.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. IP275] gi|165921948|gb|EDR39125.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. F1991016] gi|165991541|gb|EDR43842.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. E1979001] gi|166205510|gb|EDR49990.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. B42003004] gi|166958256|gb|EDR55277.1| inner membrane protein OxaA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049000|gb|EDR60408.1| inner membrane protein OxaA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055547|gb|EDR65340.1| inner membrane protein OxaA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752984|gb|ACA70502.1| 60 kDa inner membrane insertion protein [Yersinia pseudotuberculosis YPIII] gi|186700516|gb|ACC91145.1| 60 kDa inner membrane insertion protein [Yersinia pseudotuberculosis PB1/+] gi|229678777|gb|EEO74882.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis Nepal516] gi|229691233|gb|EEO83286.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis biovar Orientalis str. India 195] gi|229696175|gb|EEO86222.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700209|gb|EEO88245.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis Pestoides A] gi|270336874|gb|EFA47651.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Yersinia pestis KIM D27] gi|320017432|gb|ADW01004.1| cytoplasmic insertase into membrane protein, Sec system [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 546 Score = 330 bits (845), Expect = 4e-88, Method: Composition-based stats. Identities = 139/571 (24%), Positives = 246/571 (43%), Gaps = 52/571 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + V + + ++ + Sbjct: 1 MDSQRNLLL-IALLFVSFMIWQAWQVDNNPQPTAQTTQQTTNTATGDKASQAVPGS---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K L +IN +G + NL Y + S++ L + Y Sbjct: 56 -----GQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDTLGSSNTFELL--ETTPSFVY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + I L F + + +F +T L Sbjct: 109 QAQSGLTGKNGPDNPANGDRPLFEVPQTSFVLADGQDELRIPLTFTSKDGSVFIKTFVLK 168 Query: 176 EHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 + + V N S + + G++ + K T +N F +Q A Sbjct: 169 RNDYAIGVDYHVNNASAAPLELTLFGQLKQSINLPKKRDTGSNNFALQTYRGAAYSSDET 228 Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 +KY + + W+ + +Y+A+ +IP+ + F G+ Sbjct: 229 KYKKYSFSDIEDKNLDITTKGGWVAMLQQYFATAWIPAANE--TNTFYSAELGNGLAAIG 286 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F + I PG+ + L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 FKGAPVVIQPGEQKQLSATLWVGPEIQNKMAEIA-----PHLDLTVDYGWLWFISQPLFK 341 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 342 LLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK- 400 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 401 QRMSQEMMALYKAEKVNPLGGCLPLIIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQ 460 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF 527 DP I PI+M ++M+ KMSP D Q I+ +MPV+F Sbjct: 461 DPYY-------------------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIF 501 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++Y+ SN+++I+QQ +I + Sbjct: 502 TVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 532 >gi|307261914|ref|ZP_07543574.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868385|gb|EFN00202.1| Inner membrane protein oxaA [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 533 Score = 330 bits (845), Expect = 4e-88, Method: Composition-based stats. Identities = 138/554 (24%), Positives = 252/554 (45%), Gaps = 32/554 (5%) Query: 11 IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPR 70 + +S +I WQ + E ++ Q D A+ A+ + Sbjct: 4 LLVSFLIFTQWQQDFNP---EIQAQKQAQQQAQVASQSGDVPAASNANTVIAENATQGKT 60 Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 V L++ L +I+ G +L ++ +++S +P L + + T A + Sbjct: 61 VTLQSDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQTGATTYVAQSGLVGKNGID 120 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190 N P + + + F+ + + + Y + V N + Sbjct: 121 TNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFVLKRGSYDVAVNFNVKNQT 180 Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250 + P G+I +++ + A ++ ++ + + + + Sbjct: 181 AATVEVQPYGQIKYTLLESSGSLTMPTYTGGAYSSAETNYKKYSFQDMEKANLDINTKAG 240 Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 W+ + Y+ S ++P+++ + + + TI P T T+ L+ Sbjct: 241 WVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGPVTTIAPNSEATITSQLWT 297 Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 G K+ + + ++ +D+GW +FIAKP+F L+++ ++V N+G+AI+ T+ Sbjct: 298 GPKDQKEMEATAAN-----LDLTVDYGWAWFIAKPLFALLTFIQSIVTNWGLAIIGVTIV 352 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC 430 VK + +PL K QY S A M+ +QPKI E+RE+F Q + + M++LYK +NP+ GC Sbjct: 353 VKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMSQEMMKLYKEEKVNPMGGC 411 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 412 LPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY------------------ 453 Query: 491 GIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 I P++M SMF+ KMSP P D Q ++ +MPV+F FP+GL++YW SN+I+ Sbjct: 454 -ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFFLWFPSGLVLYWLTSNIIT 512 Query: 550 IVQQAVIMKMHGAE 563 IVQQ +I + + Sbjct: 513 IVQQWLIYRNLEKK 526 >gi|93007297|ref|YP_581734.1| putative inner membrane protein translocase component YidC [Psychrobacter cryohalolentis K5] gi|92394975|gb|ABE76250.1| protein translocase subunit yidC [Psychrobacter cryohalolentis K5] Length = 564 Score = 330 bits (845), Expect = 4e-88, Method: Composition-based stats. Identities = 129/583 (22%), Positives = 242/583 (41%), Gaps = 55/583 (9%) Query: 7 YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL-------- 57 +A+ + + +++ AW++ Y + E P+ + + Sbjct: 9 IIIAMLITAYLLILAWRDDYADAPAVDTVPETAASVGADIPSTSGAAGDIPVQTLPVDNG 68 Query: 58 ---IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 A + + + + IN +G L+ Y + S+ P V L + Sbjct: 69 TVDSAVTATPATDAGLITVTTDRYDIKINPEGGDIVYAALKQYDATLDSDKPFVLL--EN 126 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANNILFER 170 N+ Y A+ + I+ ++ + + L +K + + Sbjct: 127 NSNRVYVAQSGLIGQNG-IDTAEGRAKYSHTANNYVMEKGQQTLSVPLTYKKDGVTVTKT 185 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT------FGVQEGFIAVL 224 + Y I + N S + ++ R + + G Sbjct: 186 FTFTHDKYPIDISYKIQNASTAAWQGQMFAQLKRDDSKDPGMSDKGALSMATYLGGAWGT 245 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 D + K+ ++ W+GI Y+ S + P F +F G Sbjct: 246 PDDPYNKLKFGKFNDGELTTT-SDKGWVGIVQHYFVSAWTPEN---FTGKFFSRETGDDY 301 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + F++ + + P K +T L+AG K + +D+G + I+K Sbjct: 302 F-IGFNSQPVNVAPNKQVTLNATLYAGPKVQSELKDVAV-----GLNQTVDYGLLWPISK 355 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F ++ + ++GN+G +I+L T+ VKL + K Y S A M+ I P++ L+E+ Sbjct: 356 ILFGILDGIHKVIGNWGWSIILLTILVKLALMWFSNKSYYSMAKMRAIAPRLAALKEEHG 415 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 ++ + M+ +YK +NP+AGC PIL+Q+P+F A+Y V+ S+E+RHAP+ WI+D Sbjct: 416 DDRMKM-SQEMMAMYKEEKVNPMAGCLPILMQMPIFLALYWVLVESVELRHAPWILWIQD 474 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DP I P++M SMFIQ +++P PAD QA ++ ++P Sbjct: 475 LSAMDPWF-------------------ILPLLMGASMFIQQQLNPQPADPMQAKVMKFLP 515 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 ++F + FPAGL++YW+ +N+ S+ Q ++ K E L Sbjct: 516 IIFTAFMLFFPAGLVLYWTVNNLFSMTHQYIVNKKVEEEQKLR 558 >gi|332531205|ref|ZP_08407118.1| membrane protein insertase, yidc/oxa1 family domain containing [Hylemonella gracilis ATCC 19624] gi|332039312|gb|EGI75725.1| membrane protein insertase, yidc/oxa1 family domain containing [Hylemonella gracilis ATCC 19624] Length = 571 Score = 330 bits (845), Expect = 5e-88, Method: Composition-based stats. Identities = 147/597 (24%), Positives = 246/597 (41%), Gaps = 63/597 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQN----------FYVYP-----------RIEEMNNERKN 39 M + + IV W F+ P ++ + Sbjct: 1 MNDIRRTILWVIFGFSIVLLWDQWQIHNGRPATFFPSPTAAVAKPVAPAEQTPVSAQNPE 60 Query: 40 IQTVKQPNQVDNSYAAVLIDDRAQALSM--SPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + +Q I AQA+S RV + L + + +G + Sbjct: 61 VPQARQLATTGVDGGVAAIQAAAQAVSSLPRERVTVSTDVLKLTFDTEGGSLVRSEFLRH 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 H +P+V L + Y ++ + +LP TV L+S + Sbjct: 121 HESHDVQTPVV--LFDESKDRVYLSQTGLI---GGADLPTHKTVMKLVSSERELRDGADT 175 Query: 158 LVFKN-----ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP--QTA 210 L + L + Y + V N + + +++R Sbjct: 176 LKVQFESPVSGGVQLLKTYTLQRGSYAVDVKHEVRNVGQESVTPQVYLQLVRDGNKIPGG 235 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKET 269 ++ + G K + + DIEK ES N ++ + Y+AS ++ + Sbjct: 236 SSFYSTFTGPAVYTEAKKYHKVDFGDIEKGKADFDKESTNGYVAMVQHYFASAWLLADGV 295 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + +S+ Y A + PG + LF G +E + P Sbjct: 296 QREIFVRKVSNN--LYAVGMIAPLQALAPGATRVLDARLFVGPQEEKQLEALA-----PG 348 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E++ D+GW +AKP++ L+ ++L+ N+G +I+ V +K+ F+ L K Y S A M Sbjct: 349 LELVKDYGWLTILAKPLYWLLDKLHDLLHNWGWSIVALVVLLKIAFYWLNAKAYASMAKM 408 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K I P+I E+R++ K PQ +Q+ M+++Y+ +NPL GC PI++QIPVF A+Y V+ Sbjct: 409 KAIAPRITEMRDRLKD-KPQQMQQEMMRIYRDEKVNPLGGCLPIMIQIPVFIALYWVLLS 467 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+EMR+AP+ WIKDL+ DP I P++M+L+ +Q ++P Sbjct: 468 SVEMRNAPWILWIKDLSTQDPYY-------------------ILPLLMTLTTMLQTALNP 508 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 P D QA ++ MP+VF FPAGL++YW +NV+SI QQ VI K G Sbjct: 509 APPDPMQAKLMWIMPLVFSVMFFFFPAGLVLYWVTNNVLSIAQQWVINKRMGVPPQF 565 >gi|29655205|ref|NP_820897.1| inner membrane protein oxaA [Coxiella burnetii RSA 493] gi|161830140|ref|YP_001597736.1| inner membrane protein oxaA [Coxiella burnetii RSA 331] gi|30581048|sp|P45650|OXAA_COXBU RecName: Full=Inner membrane protein oxaA gi|189036348|sp|A9NBA5|OXAA_COXBR RecName: Full=Inner membrane protein oxaA gi|29542477|gb|AAO91411.1| 60 kDa inner membrane protein [Coxiella burnetii RSA 493] gi|161762007|gb|ABX77649.1| Inner membrane protein oxaA [Coxiella burnetii RSA 331] Length = 566 Score = 330 bits (844), Expect = 5e-88, Method: Composition-based stats. Identities = 135/576 (23%), Positives = 244/576 (42%), Gaps = 44/576 (7%) Query: 2 ERNWNYFVAIA---LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 + + L++ + AWQ Y E+ ++ Sbjct: 1 MDIKRIILYVIVALLAIALFNAWQRDYPPTPKPTPTVEQPTANGDHPTAYTPPAFTPGAA 60 Query: 59 DDRAQA--------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + +A + + + ++ L I+ +G L Y + + V + Sbjct: 61 EKTKKAGTIAFTSKVPEARLITVRTDVLDVEIDTQGGNIVSAKLPKYPVSLEEKQTPVQI 120 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 LS Y A+ + + + ++L + + +L + Sbjct: 121 LSGE-PNELYIAQSGLTNGNGQPTTVQFESEKKQYVLENGQNQLIVQLTGRAPDGLLVTK 179 Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS- 228 T + + Y + V NN+ + S +I R +P T + F V+ A +G Sbjct: 180 TYTFHRDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHFYVRSYNGASMGSPQT 239 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHAR 284 + Y ++K +I +S W+ + Y+ S ++P + + ++ SD Sbjct: 240 PYEKLSYESLDKQNIDRTSQS-GWIAMQQHYFLSAWVPGNPELTYHYYSHVIPASDEPNV 298 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y F + ++ + G T L+ G + + P E ID+GW + I+ Sbjct: 299 YVVGFVSPQMNVAAGSEAATHATLYVGPEIAKRLKGLA-----PGLERTIDYGWLWPISM 353 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F ++S + +V N+G +I++TT+ +K++F+ + K + S A M+ +QP+I L+E+ Sbjct: 354 LLFWILSAVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARMREMQPRIQALKERHG 413 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q L +A ++LY+ INPL GC P+L+Q+PVF A Y VI S+++R APF WI D Sbjct: 414 D-DRQALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIESVQLRQAPFIFWIHD 472 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I PIIM LSM Q +SP D Q ++ +P Sbjct: 473 LSVKDPYY-------------------ILPIIMGLSMLAQQWVSPTSPDPTQQKMMWILP 513 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 V+F +FPAGL++YW +NV+ +QQ + K + Sbjct: 514 VIFTVFFINFPAGLVLYWITNNVVQTLQQWYVNKTY 549 >gi|262281558|ref|ZP_06059337.1| preprotein translocase subunit YidC [Acinetobacter calcoaceticus RUH2202] gi|262257017|gb|EEY75756.1| preprotein translocase subunit YidC [Acinetobacter calcoaceticus RUH2202] Length = 586 Score = 330 bits (844), Expect = 6e-88, Method: Composition-based stats. Identities = 136/588 (23%), Positives = 238/588 (40%), Gaps = 67/588 (11%) Query: 11 IALSVIIVYAWQNFYVYPRIEEMNNERK-----------NIQTVKQPNQVDNSYAAVLID 59 + +++ AWQ Y N + + V + A Sbjct: 14 FVTAYLLILAWQKDYGNAATAPQKQAAAVSSHEVSADLPNAKNATVASDVPQANIAQSQT 73 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A A + ++ IN KG + L + S+ P V L + S Sbjct: 74 TDATAPVNQQLISVQTDLYHIWINPKGGDIVRIELLSHDKSKDSDQPFVMLENDSK--RT 131 Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164 Y A+ + ++ G+ + Sbjct: 132 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQKGQSEKVLNVPMVFKTPEG 191 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + Y + V N S + G++ R + F + Sbjct: 192 VEIIKTFTFTQGQYPIVVRHQVINRSQQSWQGQMFGQLKRDNSDDPGKSSQGIFTLGTFL 251 Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271 G + K+++ + +S W+ I Y+ S +IP + + Sbjct: 252 GGAWGTPESHYNKLKFANFSEEKVS-TEAKGGWVAIVQHYFVSAWIPGNLKLTQANGQPY 310 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++ + F++ I + G S+ L++G K + Sbjct: 311 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQAELKDLAV-----GLN 365 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW + IAK +F+ + +F+++VGN+G +I+L TV VK++ +PL+ K Y S A M+ Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTVMVKMILWPLSSKSYRSMAKMRV 425 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++ ++E+F + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+ Sbjct: 426 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+RHAP+ GWI+DL+A DP I P+IM ++MF+Q ++P P Sbjct: 485 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGVTMFVQQMLNPQP 525 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 AD QA + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 526 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINKS 573 >gi|163803611|ref|ZP_02197477.1| putative inner membrane protein translocase component YidC [Vibrio sp. AND4] gi|159172605|gb|EDP57463.1| putative inner membrane protein translocase component YidC [Vibrio sp. AND4] Length = 540 Score = 329 bits (843), Expect = 7e-88, Method: Composition-based stats. Identities = 140/570 (24%), Positives = 245/570 (42%), Gaps = 42/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V E+ + + V Sbjct: 1 MDSQRN-ILLIALALVSFMLFQKWQVAKNPAPQAIEQAQSSSTLPAPSFADELDPVPGQQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +A A + + L SI+ G NL Y ++ S+ P V L + + Sbjct: 60 QASA----KTITVTTDVLTLSIDTLGGDVVHANLNKYSAELDSSDPFVLLKDTKG--HQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176 A+ V + + + + P +L F + + Sbjct: 114 IAQSGLVGPQGIDLSSTNRPSYKVSADSFTLPDGQDELRVPMTFTANGIEYIKTYVFERG 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y + + NNS + + ++ + T G D + + Sbjct: 174 SYALNVEYDIVNNSGNNATLGMYAHLRQNLMDDGGSITMPTYRGGAYSTEDVRYKKYSFD 233 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S W + Y+A+ +IP E + + + + Sbjct: 234 DMQDRNLSINLADGKGWAAMIQHYFAAAWIPRDEPGTNLYTRVIGNLGD---IGVRIPNK 290 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G T L+ G K + P ++++D+GW +F+AKP+ L+++ Sbjct: 291 TIATGDQTTFKATLWVGPKLQNEMAAVA-----PNLDLVVDYGWLWFLAKPLHSLLAFIQ 345 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+GIAI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 SFVGNWGIAIVCLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC P++LQ+P+F ++Y + S+E+RH+PF+GWI DL+A DP Sbjct: 405 MMELYKKEKVNPLGGCLPLVLQMPIFISLYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M +SMFI KMSP D Q I+ +MP++F F Sbjct: 463 -----------------ILPVLMGVSMFIIQKMSPTTVTDPMQQKIMTFMPLMFTFFFFM 505 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I K + Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYKSLEKK 535 >gi|89902989|ref|YP_525460.1| 60 kDa inner membrane insertion protein [Rhodoferax ferrireducens T118] gi|89347726|gb|ABD71929.1| protein translocase subunit yidC [Rhodoferax ferrireducens T118] Length = 571 Score = 329 bits (843), Expect = 8e-88, Method: Composition-based stats. Identities = 132/594 (22%), Positives = 235/594 (39%), Gaps = 57/594 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51 M + + +V W + + + P V Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDQWQVFNGHKATFFPSASNTAATAHPPVPASSVPAGVPT 60 Query: 52 SYAAV-----------LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 + L + + R+ + L + + +GA + Sbjct: 61 ANTVAAAAQMTGAAAGLTSTTDASAAAHERLVVTTDVLKLTFDTEGASVVQTEFVRHADM 120 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 + V L SN + Y A+ ++ A P TV + G+ +LV Sbjct: 121 ADKSKHFVLL--ESNKDHTYMAQTGLIAGAAGGTFPTHKTVMTVAPGERTLQEGSNQLVI 178 Query: 161 KN-----ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNT 213 + L + Y + V N + +++R P + Sbjct: 179 RFESPELGGVKLVKTFTLTRGTYAVAVKHEVVNVGTAAVSPQLYLQLVRDGTKPLGESKF 238 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFH 272 + G K + + DIE + + + ++ + Y+AS ++ Sbjct: 239 YSTFTGPAIYTEAKKYQKVDFKDIENNKVDVEKTAESGYVAMVQHYFASAWLLGDGIKRD 298 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + + Y I PG S + FAG +E + P E+ Sbjct: 299 LFLRKVD--TNLYAVGMITPMDNIAPGASKSVEARFFAGPQEEKVLEALA-----PGLEL 351 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + D+GW +AKP++ L+ + +GN+G +I+ + +K F+ L K Y S A MK + Sbjct: 352 VKDYGWLTILAKPLYWLLHAIESFLGNWGWSIVALVLLLKAAFYWLNAKAYASMAKMKAV 411 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PK+ E+RE+ K +P Q+ Q+ M+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+E Sbjct: 412 NPKVTEMRERLKDNPQQM-QQEMMRIYREEKVNPMGGCFPIMIQIPVFIALYWVLLASVE 470 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 MR+AP+ WI DL++ DP I P++M+L+ +Q ++P P Sbjct: 471 MRNAPWILWIHDLSSPDPFY-------------------ILPLVMTLTTVLQTSLNPAPP 511 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 D QA ++ +MP+ F FPAGL++YW +N++SI QQ +I G Sbjct: 512 DPMQAKMMWFMPLAFSVMFFFFPAGLVLYWITNNILSIAQQWLINTRMGVPPKF 565 >gi|315128186|ref|YP_004070189.1| preprotein translocase; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase [Pseudoalteromonas sp. SM9913] gi|315016699|gb|ADT70037.1| preprotein translocase; inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the with SecYEG and SecDFyajC translocase [Pseudoalteromonas sp. SM9913] Length = 544 Score = 329 bits (842), Expect = 9e-88, Method: Composition-based stats. Identities = 134/570 (23%), Positives = 244/570 (42%), Gaps = 39/570 (6%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME F+ I L S ++ W N Y P+ + + + + + + Sbjct: 1 MESQR-TFLFIGLMLVSFLLFQEWNNDYNTPKADPSATTQTLKANSPESDDYVPASSDSG 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + L+ +++ I+ KG + +L Y S+ P + L Sbjct: 60 LPA-STTLAKRSVIDITTDVFKVKIDTKGGDIVETDLINYKETKGSDVPYMLLGEFDG-- 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWN--LISGKILTPTTPIKLVFKNANNILFERTISL- 174 YF++ + N + S + + L F ++N + F +T Sbjct: 117 KQYFSQSGLIGLNGPDASANGRPTYQSEQTSYTLTGDELRVPLQFTDSNGVSFTKTYVFK 176 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 Y + V N + ++ +I R + + G ++ + + Sbjct: 177 KGQYDVGLEYKVNNTTSAPVQVQLYTQIKRTVQEKGSMVDQNYLGAAYGTDEEPYEKYSF 236 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 SD+ N + ++ Y+ S ++P ++ + L + Sbjct: 237 SDM-ADKNLNINTQGGYVAFIQHYFVSAWVPMQDQANT--LYSLITKSNAAIIGVKDEAV 293 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 + G T + G KE + D ++ +D+GW +FI++P+F+L+ + + Sbjct: 294 NVQAGSEQVLTATYYMGPKESDKLEAIHTD-----LDLTVDYGWLWFISQPLFVLLKWLH 348 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +++GN+G+AI+ T+ VK L +PL K QY S A M+ +QPK+ L+EK+ Q +A Sbjct: 349 SILGNWGVAIIAITIIVKSLMYPLTKAQYTSMAKMRALQPKMKALKEKYGD-DRQKFGQA 407 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +++Y+ +NP+ GC+PILLQ+P+F A++ V S E+RHA F W+ DL+A DP Sbjct: 408 TMEMYRKEKVNPMGGCFPILLQMPIFLALFYVFLESTELRHAEFVLWLTDLSAKDPYY-- 465 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 + PI+ SMFI K+ P D Q ++ +MPV+F Sbjct: 466 -----------------VLPILFGASMFITQKLQPMTVTDPMQQKMMTFMPVIFSVFFLW 508 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+ISIVQ +I + + Sbjct: 509 FPSGLVLYWLVSNLISIVQMLIIYRGMEKK 538 >gi|17544723|ref|NP_518125.1| inner membrane protein translocase component YidC [Ralstonia solanacearum GMI1000] gi|38503108|sp|Q8Y3H6|OXAA_RALSO RecName: Full=Inner membrane protein oxaA gi|17427012|emb|CAD13532.1| putative preprotein translocase subunit yidc transmembrane [Ralstonia solanacearum GMI1000] Length = 553 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 150/577 (25%), Positives = 244/577 (42%), Gaps = 49/577 (8%) Query: 1 MERNWNYFVAIALSVIIVYA---WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVD 50 M+ + + S+ +V WQ F+ P+ + Sbjct: 1 MDI-KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTVTTTAAAPGGTPAGDVPKAA 59 Query: 51 NSYAAVLIDDRAQ----ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 AA A S ++ + + +++ GA L L + Sbjct: 60 APAAAGSQAAPATGAVSQTPASEKIVVTTDVIRATVDTAGAIVTKLELL----TQKDHDG 115 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 +L + + Y A + + T + L Sbjct: 116 NPMVLFDRSLERTYLARSGLIG-GDFPNHTTVFTASAGPRDLGTGGEVSLTLTADKGGAK 174 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLG 225 L + + Y+ VTN+ I + + R + + G Sbjct: 175 LAKTYVFKRGSYVIDTRFDVTNDGAAPINPTLYMELARDGGAVEQSRFYSTFTGPAVYTD 234 Query: 226 DKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 + ++DI+KS + W+ + Y+AS +IP+ +F Sbjct: 235 TDHYHKITFADIDKSKAHVPAPTDSGWVAMVQHYFASAWIPAASA--KREFYVDRIDTNF 292 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y+ T+ PG S++ T LFAG +E + P E++ D+GW IAK Sbjct: 293 YRVGMQQALGTVAPGASVSATARLFAGPQEERMLEGIT-----PGLELVKDYGWLTIIAK 347 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + L+GN+G +I+ TV VKL+FFPL+ Y S A MK++QP++ +RE+ K Sbjct: 348 PLFWLLEKIHKLLGNWGWSIVALTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHK 407 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 PQ + + M+ LY+T +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ GW+ D Sbjct: 408 G-DPQKMNQEMMTLYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWVHD 466 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 LA+ DP I PI+M++SMF+Q +++P P D QA ++ +MP Sbjct: 467 LASPDPFY-------------------ILPILMAVSMFVQTRLNPTPPDPVQAKMMMFMP 507 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + F FPAGL++YW +N +SI QQ I +M G Sbjct: 508 IAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 544 >gi|221069751|ref|ZP_03545856.1| YidC translocase/secretase [Comamonas testosteroni KF-1] gi|220714774|gb|EED70142.1| YidC translocase/secretase [Comamonas testosteroni KF-1] Length = 570 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 135/587 (22%), Positives = 245/587 (41%), Gaps = 50/587 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQ----------NFYVYPRIEEMNNER-------KNIQTV 43 M + + +V W F+ P+ Q Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDKWQIHNGKKPTFFPSPQTVSAPAAADAKPADVSVPQPA 60 Query: 44 KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 + D AA A A++ V + + + + + +G L Y + Sbjct: 61 AAASAGDVPGAANAAGQPAAAVTPRQDVTVGSDVMRLTFDSEGGTLKHSELLKYSDT--A 118 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 + + + N K Y + + + K + ++ + Sbjct: 119 DDKKLMQVFEENAKRVYLGQTGLIGGNFPTHKTPMTVMPGERELKDGQDSVQVRFESADQ 178 Query: 164 NNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGF 220 + +T +L Y + V N + +++R P+ ++ + G Sbjct: 179 GGVKLVKTFTLKRGSYAVDVQHDVVNTGSAAVNPQLYMQLVRDGNKPEHESSFYSTFTGP 238 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS 279 K + ++ DIE S ++ + Y+AS ++ + + + + Sbjct: 239 AVYTDAKKYHKVEFKDIESGKAEVDKASPNGFVAMVQHYFASAWLLADGIQRDNFVRKV- 297 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G Y T+ PG++ T ++ LF+G + P + P E++ D+GW Sbjct: 298 -GDNLYAVGMITPVGTVEPGQTKTVSSRLFSGPQIEPMLEKLS-----PGLELVKDYGWL 351 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +AKP++ L+S + +GN+G +I+ V +K+ F+ L K Y S A MK I P+I E+ Sbjct: 352 TILAKPLYWLLSELHKFIGNWGWSIVALVVLLKIAFYWLNAKAYSSMAKMKAINPRIQEM 411 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+ K PQ +Q+ M+++Y+ +NP+ GC PI++QIPVF A+Y V+ S+E+R+AP+ Sbjct: 412 RERLKD-KPQQMQQEMMRIYREEKVNPMGGCLPIIIQIPVFMALYWVLQSSVEIRNAPWI 470 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 GWI DL+ DP I P++M+LS +Q ++P P D QA + Sbjct: 471 GWIHDLSVPDPFF-------------------ILPLLMTLSSLLQTALNPAPPDPMQAKM 511 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + MP++F FP+GL++YW +N++SI QQ +I K G Sbjct: 512 MWIMPLMFSVMFFFFPSGLVLYWLTNNILSIAQQWIINKRMGVPPQF 558 >gi|317154269|ref|YP_004122317.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio aespoeensis Aspo-2] gi|316944520|gb|ADU63571.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio aespoeensis Aspo-2] Length = 554 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 139/575 (24%), Positives = 231/575 (40%), Gaps = 46/575 (8%) Query: 1 ME--RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV------KQPNQVDNS 52 ME +A+ALS I+++ WQ E+ RK ++ + Sbjct: 1 MEKKEQIRLVIALALSFIVIFGWQYLMAPSAEEQAEVARKAVEAERRAVALSSQSDAAGV 60 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A + + V + P N +G + L+ Y + +SP V L+ Sbjct: 61 TQAHGVPAGDFIATAGVAVTVDTPLYTAVFNSQGGILEKFILKNYRETIKPDSPNVDLIG 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 + + + + + L F + Sbjct: 121 ANAFAKGPLGLILTAGDKEFHTWQRGEWAFAGSNLALGEGDGVKTLTFSGQSGDFRIERT 180 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 + + I ++ ++ + +A L E Sbjct: 181 LTFDPATYHITESAMVTTLGNTGVEGAVSFTAAAKSMSAEDDSYNPTKVAYLSADGREEM 240 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 D K + W + Y+ IP+ E+ + Sbjct: 241 SDRDDLKETGITSPSGLKWGAVESNYFLFAIIPASES-----ATLSAGVQDDIFRMAVNE 295 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + T LP + T F G + + E +D+GWF F+AKP+ + +++ Sbjct: 296 DATFLPNVTKTVKASYFLGPTDRDMLATMPNQ-----LEKAVDFGWFDFLAKPLLIGLNF 350 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 FY+ V N+GIAI+L T+ +KL+F+PL+++ Y S MK +QP + +LREK+ Q L Sbjct: 351 FYDYVHNYGIAIILLTIVIKLIFWPLSQRSYASMEQMKKLQPMVQKLREKYGDDK-QRLN 409 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIKD 464 + + LYKT+ +NP+ GC P+++QIPVFF +YK + ++E+RHAPF W+ D Sbjct: 410 QETMALYKTYKVNPMGGCLPMVVQIPVFFGLYKALLGAVELRHAPFIANVPFTDLPWLAD 469 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DP + P+IM +MF+Q KM+P D Q I+ MP Sbjct: 470 LSAKDPYY-------------------VTPLIMGATMFLQQKMTPSAGDPTQQKIMMLMP 510 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 VVF F FP+GL+IYW +NV+SI QQ +I++ Sbjct: 511 VVFTFMFLQFPSGLVIYWLLNNVLSIGQQLLIVRS 545 >gi|54307240|ref|YP_128260.1| putative inner membrane protein translocase component YidC [Photobacterium profundum SS9] gi|81697579|sp|Q6LW55|OXAA_PHOPR RecName: Full=Inner membrane protein oxaA gi|46911660|emb|CAG18458.1| Putative inner membrane protein, 60 kDa [Photobacterium profundum SS9] Length = 538 Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 136/569 (23%), Positives = 239/569 (42%), Gaps = 42/569 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFY--VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + IAL + +Q + P+ + E++ + P+ + Sbjct: 1 MDSQRN-ILLIALLFVSFLLYQQWNMDNSPQPQGQGTEQQVNNSGDVPSHSGDGQPI--- 56 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 Q + + + L S++ G + L Y+ ++ S + L Sbjct: 57 --PDQETTSKDLITINTDVLALSVDTLGGDVIEAKLLAYNNELDSADSFILL--KDEPGL 112 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTISLD 175 +Y A+ + + L + + + + Sbjct: 113 SYIAQSGLIGANGIDSANGRAQLAVTAKDFTLADGQDELRVPMTYVKDGITYTKTFVLKR 172 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 Y + T+ N S ++ ++ + A D + ++ Sbjct: 173 NSYAVDVEYTIDNQSASAASVQMYAQLRQNLMDDGGSLTMPTYRGGAYSTDTTNYKKYSF 232 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D + N +N W + Y+ S +IP E + + + + T Sbjct: 233 DDMQDKSLNMTTTNGWAAMLQHYFVSAWIPRSEEASNLYTRASNG---LGYIGVRLPTTT 289 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I G T T L+ G K + + + +D+GW +FIA P+ L+S+ + Sbjct: 290 IAAGTEQTLTATLWVGPKLQKEMEATAAN-----LNLTVDYGWLWFIASPLHKLLSFIQS 344 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +VGN+G+AIM+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + M Sbjct: 345 IVGNWGLAIMMLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERLGD-DRQRMSQEM 403 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK +NPL GC PI+LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 404 MELYKKEKVNPLGGCLPIVLQMPIFIALYWSLMESVELRHSPFFGWIHDLSAQDPYY--- 460 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534 I P++M +SMF+ KMSP D Q I+ +MPV+F F F Sbjct: 461 ----------------ILPLLMGVSMFMIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLFF 504 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+GL++YW SNV++++QQ +I + + Sbjct: 505 PSGLVLYWLVSNVVTLLQQTLIYRSLEKK 533 >gi|323516074|gb|ADX90455.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii TCDC-AB0715] Length = 574 Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 137/588 (23%), Positives = 241/588 (40%), Gaps = 67/588 (11%) Query: 11 IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 + +++ AWQ Y E++ + N +T + V + A Sbjct: 2 FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVASDVPQANIAQSQT 61 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A A + ++ IN KG + L + SN P V L + + Sbjct: 62 TDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPFVMLENDAK--RT 119 Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164 Y A+ + ++ SG T + Sbjct: 120 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKVLTVPMVFKTPEG 179 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + Y + V N S + G++ R + + F + Sbjct: 180 VEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 239 Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271 G + K+++ + ++ W+ + Y+ S +IP + + Sbjct: 240 GGAWGTPDAHYNKLKFANFSEEKLN-TEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQPY 298 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++ + F++ I + G S+ L++G K + Sbjct: 299 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 353 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ Sbjct: 354 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 413 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++ ++E+F + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+ Sbjct: 414 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 472 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+RHAP+ GWI DL+A DP I P+IM +MF Q ++P P Sbjct: 473 ELRHAPWLGWIHDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 513 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 AD QA + MP++F + FPAGL++YW +N I+I+QQ I K Sbjct: 514 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINKS 561 >gi|299772121|ref|YP_003734147.1| putative inner membrane protein translocase component YidC [Acinetobacter sp. DR1] gi|298702209|gb|ADI92774.1| putative inner membrane protein translocase component YidC [Acinetobacter sp. DR1] Length = 586 Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats. Identities = 136/588 (23%), Positives = 237/588 (40%), Gaps = 67/588 (11%) Query: 11 IALSVIIVYAWQNFYVYPRIEEMNNERK-----------NIQTVKQPNQVDNSYAAVLID 59 + +++ AWQ Y N + + V + A Sbjct: 14 FVTAYLLILAWQKDYGNAATAPQKQAAAVSSHEVSADLPNAKNATVASDVPQANIAQSQT 73 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A A + ++ IN KG + L + S+ P V L + TK Sbjct: 74 TDATAPVNQQLISVQTDLYHIWINPKGGDIVRIELLSHDKSKDSDQPFVMLEND--TKRT 131 Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164 Y A+ + ++ G+ + Sbjct: 132 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQNQKGQSEKVLNVPMVFKTPEG 191 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + Y + V N S + G++ R + F + Sbjct: 192 VEIIKTFTFTQGQYPIVVRHQVINRSQQSWQGQMFGQLKRDNSDDPGKSSQGIFTLGTFL 251 Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271 G + K+++ + ++ W+ I Y+ S +IP + + Sbjct: 252 GGAWGTPDSHYNKLKFANFSEEKVN-TEAKGGWVAIVQHYFVSAWIPGNLKLTQANGQPY 310 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++ + F++ I + G S+ L++G K + Sbjct: 311 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 365 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW + IAK +F+ + +F+++VGN+G +I+L TV VK++ +PL+ K Y S A M+ Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTVMVKMILWPLSSKSYRSMAKMRV 425 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++ ++E+F + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+ Sbjct: 426 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+RHAP+ GWI+DL+A DP I P+IM +MF Q ++P P Sbjct: 485 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 525 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 AD QA + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 526 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINKS 573 >gi|71066698|ref|YP_265425.1| putative inner membrane protein translocase component YidC [Psychrobacter arcticus 273-4] gi|71039683|gb|AAZ19991.1| protein translocase subunit yidC [Psychrobacter arcticus 273-4] Length = 565 Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats. Identities = 129/584 (22%), Positives = 242/584 (41%), Gaps = 56/584 (9%) Query: 7 YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV--------- 56 +A+ + + +++ AW++ Y + E P+ + Sbjct: 9 IIIAMLITAYLLILAWRDDYADAPAVDTVPETATSVGADIPSTSGAAGDIPVQTLPVDNG 68 Query: 57 ---LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A + + + + IN +G L+ Y + S+ P V L Sbjct: 69 TVDNSAVTATPATDAGLITVTTDRYDIKINPEGGDIVYAALKQYDATLDSDKPFVLL--E 126 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANNILFE 169 +N+ Y A+ + I+ ++ + + L +K + + Sbjct: 127 NNSNRVYVAQSGLIGQNG-IDTAEGRAKYSHTANNYVMEKGQQTLSVPLTYKKDGVTITK 185 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT------FGVQEGFIAV 223 + Y I + N S + ++ R + + G Sbjct: 186 TFSFTHDKYPIDISYKIQNASTAAWQGQMFAQLKRDDSKDPGMSDKGALSMATYLGGAWG 245 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 D + K+ + ++ W+GI Y+ S + P F +F G Sbjct: 246 TPDDPYNKLKFGNFNDGELTTT-SDKGWVGIVQHYFVSAWTPEN---FTGKFFSRETGDD 301 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y F++ + + P K +T L+AG K + +D+G + I+ Sbjct: 302 -YFIGFNSQPVNVAPDKQVTLNATLYAGPKVQSELKDVAA-----GLNQTVDYGLLWPIS 355 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 K +F L+ + ++GN+G +I+L T+ VK + K Y S A M+ I P++ L+E+ Sbjct: 356 KILFALLDGIHKIIGNWGWSIILLTILVKFALMWFSNKSYYSMAKMRAIAPRLAALKEEH 415 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 ++ + M+ +YK +NP+AGC PIL+Q+P+F A+Y V+ S+E+RHAP+ WI+ Sbjct: 416 GDDRMKM-SQEMMAMYKEEKVNPMAGCLPILMQMPIFLALYWVLVESIELRHAPWVLWIQ 474 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+A DP I P++M +SMF+Q +++P PAD QA ++ ++ Sbjct: 475 DLSAMDPWF-------------------ILPLLMGVSMFVQQQLNPQPADPMQAKVMKFL 515 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P++F + FPAGL++YW+ +N+ S+ Q ++ K E L Sbjct: 516 PIIFTAFMLFFPAGLVLYWTVNNLFSMTHQYIVNKKVEEEQKLR 559 >gi|90415380|ref|ZP_01223314.1| inner membrane protein, 60 kDa [marine gamma proteobacterium HTCC2207] gi|90332703|gb|EAS47873.1| inner membrane protein, 60 kDa [marine gamma proteobacterium HTCC2207] Length = 560 Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats. Identities = 133/579 (22%), Positives = 248/579 (42%), Gaps = 50/579 (8%) Query: 1 MERNWNY-FVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV-- 56 M+ + AI + +++ W NF + ++++ T+ QP+Q+ Sbjct: 1 MDWKKSLNIAAIGFVAWLLIIEWSNF--QDDVASQIPQQESELTIPQPSQLPTLETQQVN 58 Query: 57 -----------LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + + V + ++ +I+ G + L + +S + Sbjct: 59 QFSDELPLLIDTPAAVVETRVDARLVTVTTDAVEVTIDTLGGDIVQVKLLKHLTKMSEDG 118 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKN 162 L ++KN Y A+ + S L P L Sbjct: 119 GEPFTLLTRSSKNEYIAQSGLIGKNGTDTREGRGAYSTSASQFSLEPNQSALNVDLTLNQ 178 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ---TATNTFGVQEG 219 L +R Y+ + + N+ + + G+I R + ++ G Sbjct: 179 NGVRLVKRFSFSRSGYVIGVSYLINNSGYEPWEATFYGQIKRDSHEPLVESSGGIQPYLG 238 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 DK+ + +SDI + W+ + Y+ S +IP + + + LS Sbjct: 239 AALREADKNFAKHDFSDI-QDETVKSSIEGGWVAMVQHYFVSAWIPPGDQKNNFSLRKLS 297 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G Y F+ +I + G + G K+ + + ++ +D+G+ Sbjct: 298 -GQDVYLMGFTGEKINVASGSYGEYMAQFYVGPKDQAKLEELAE-----YLDLTVDYGFL 351 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + +AKP+F M + + +VGN+G +I+L T+ +K+L +PL+ S A M+++QPK++ L Sbjct: 352 WMLAKPIFAAMKFIHEVVGNWGWSIILLTIGIKILLYPLSAASLRSMAKMRSLQPKMERL 411 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +E Q + + ++ LYK +NP GC+P+LLQ+PVF A+Y V+ S+E+RH+P+ Sbjct: 412 KE-TYGDDRQKMSQELMGLYKKEKVNPAGGCFPMLLQMPVFLALYWVLLESVEIRHSPWI 470 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+A DP I P++M SM + K+ P P D QAM+ Sbjct: 471 FWIDDLSAKDPYF-------------------ILPLVMGASMLLMQKLQPMPTDPTQAMV 511 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + MP+ F F FP+GL++YW+ +N++S+ QQ + + Sbjct: 512 MKIMPIAFTFFFMIFPSGLVLYWTVNNLLSMFQQWYVNR 550 >gi|160872739|ref|ZP_02062871.1| inner membrane protein OxaA [Rickettsiella grylli] gi|159121538|gb|EDP46876.1| inner membrane protein OxaA [Rickettsiella grylli] Length = 538 Score = 328 bits (839), Expect = 2e-87, Method: Composition-based stats. Identities = 135/567 (23%), Positives = 248/567 (43%), Gaps = 39/567 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME + + AL ++ W + N+ T + N++ + Sbjct: 1 MELARVFLLG-ALFLVAFMLWNAWQNEYPSHHQEIGSANVITEQPDNKI---NLPAMKTI 56 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN-SPIVTLLSPSNTKNA 119 + + + + +K L I+ G NL Y + S LL+ N Sbjct: 57 PVENRNKNRFIHVKTDVLDVWIDTVGGNIVKANLLHYPQYPNQPRSTPFQLLNNDNAH-- 114 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 Y+ + + + ++ + + N + + LV I ++ + + Sbjct: 115 YYVAQNGLISTEKKQVFHYQSNKNNYTLNPEESVLKVSLVCNTCGKIKVQKQFTFKRNDY 174 Query: 180 -FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS--LVEQKYSD 236 + ++N + + + K A + F + + ++ + + D Sbjct: 175 LIPVRYQISNVAPSIFEGRFYVQFQQRKIDKAHSLFNISSYTGGAISTQNKPYQKISF-D 233 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 K + + W+ + Y+ S +IP FH D Y I Sbjct: 234 KMKQGTLSLATQDGWVAMLQHYFLSAWIPPAGQEFHFYSYAKDD---IYTLGMLGAPFQI 290 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG + + L+ G + + P ++ +D+G +FI+ +F L+ + ++ Sbjct: 291 QPGMEFVSESKLYLGPESMDRLKAVA-----PHLDLTVDYGILWFISMALFSLLKFIHHY 345 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+G +I++ TV +KL F+ L+ K Y S A+M+++QP++ LRE++ Q L +A + Sbjct: 346 VGNWGWSIVIVTVLIKLAFYHLSAKSYRSMASMRSLQPRLQALRERYGDDK-QKLTQATM 404 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYKT +NPL GC PIL+QIPVF A+Y ++ S+E+R APF WI DL+A DP Sbjct: 405 ALYKTEKVNPLGGCLPILVQIPVFIALYWMLLESVELRQAPFILWIHDLSAKDPYY---- 460 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 I P++M ++MF+Q +++PPP D QA ++ ++P+ F +FP+ Sbjct: 461 ---------------ILPVLMGITMFVQQRLNPPPPDPTQAKVMQFLPIFFTALFLNFPS 505 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW +N +SI+QQ IM+ E Sbjct: 506 GLVLYWIVNNTLSILQQWFIMRRLSVE 532 >gi|283851181|ref|ZP_06368464.1| 60 kDa inner membrane insertion protein [Desulfovibrio sp. FW1012B] gi|283573350|gb|EFC21327.1| 60 kDa inner membrane insertion protein [Desulfovibrio sp. FW1012B] Length = 530 Score = 328 bits (839), Expect = 2e-87, Method: Composition-based stats. Identities = 149/571 (26%), Positives = 248/571 (43%), Gaps = 55/571 (9%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 N +A+ LS+ ++ W + P + QT Q A Sbjct: 1 MENKRVILAVVLSLAVLVGWNFLF--PAKPQAPKTDTPTQTEAPTAQAPAPAAQRAETLP 58 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A A + +V + P N G + +L+GY ++ +SP+V L++ A Sbjct: 59 AFAPTPGRKVTVNTPLYTAVFNSAGGVLEQFSLKGYRQTIAPDSPLVDLVNAKAQLKAPL 118 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPT---TPIKLVFKNANNILFERTISLDEHY 178 + N N W++ G + + + + ++ Y Sbjct: 119 GLIV------NGTPTWQNVEWSVEGGDLKLDAAGAGSLSFTGRLGDTLIRRTLTFSGASY 172 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 L +++N ++ + + A +++ + G E ++ + Sbjct: 173 LIDEKLSLSNTGAAPVKDRLSLTVAVDRLSAADDSYNPTQAAFYDTGL----ELFSNEKK 228 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPS-KETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + W + Y+ IP + ++F ++ + I I Sbjct: 229 LAEGMTDEKPVQWGAVMSNYFLVGIIPEAEGLRGKAKF-----EDEIFRVALDKDGIEIP 283 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G + G K+ + +LA ID+GWF FIAKP+ L+ +FY+ V Sbjct: 284 AGGRTDLDVRYYLGPKDPKFLAQAPHNLAA-----AIDYGWFDFIAKPLLKLLHFFYDYV 338 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G+AI+L TV +K LF+PL+ K Y S MK +QP + +LREK K Q + + M+Q Sbjct: 339 GNYGVAIILLTVLIKGLFWPLSHKSYKSMEQMKRLQPLLTQLREKHKD-DRQKMNEEMMQ 397 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIKDLAAAD 469 LYKT+ +NP GC P+++QIPVFF +Y+ + S+E+RHAPF W+ DL+A D Sbjct: 398 LYKTYKVNPAGGCLPMIVQIPVFFGLYQALLHSIELRHAPFIAHLPFTNMIWLADLSAKD 457 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I P++M +MF+Q KM+P P D QA ++ MPV+F F Sbjct: 458 PYY-------------------ITPLVMGATMFLQQKMTPAPGDPTQAKVMLLMPVIFTF 498 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI-MKM 559 +FP+GL++YW +NVISI QQ + K Sbjct: 499 MFLNFPSGLVVYWLVNNVISIAQQYWMLNKK 529 >gi|207727482|ref|YP_002255876.1| preprotein translocase subunit yidc [Ralstonia solanacearum MolK2] gi|206590719|emb|CAQ56331.1| preprotein translocase subunit yidc [Ralstonia solanacearum MolK2] Length = 563 Score = 328 bits (839), Expect = 2e-87, Method: Composition-based stats. Identities = 153/578 (26%), Positives = 249/578 (43%), Gaps = 41/578 (7%) Query: 1 MERNWNYFVAIALSVIIVYA---WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVD 50 M+ + + S+ +V WQ F+ P+ + Sbjct: 1 MDI-KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGGTPAGDVPKSA 59 Query: 51 NSYAAVLIDDR-----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + AA A S ++ + + +++ GA L L + Sbjct: 60 ATPAAAGSQAAPATGGASQTPASEKIVVTTDVIRATVDTAGAILTKLELLTQK---DHDG 116 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 V L + + Y A + + + L Sbjct: 117 NPVVLF-DRSLERTYLARSGLIG-GDFPNHTTVFAASAGPRNLGTGGEVSLTLTADKGGA 174 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVL 224 L + + Y+ VTN+ I + + R + + G Sbjct: 175 KLAKTYVFKRGSYVIDTRFDVTNDGAAPISPTLYMELARDGGSVEQSRFYSTFTGPAVYT 234 Query: 225 GDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + +SDI+K N W+G+ Y+AS +IP+ +F Sbjct: 235 DADKFHKINFSDIDKGKAHVPAATDNGWVGMVQHYFASAWIPAASA--KREFYVDRVDTN 292 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ T+ PG S++ T LFAG +E + P +++ D+GW IA Sbjct: 293 FYRIGIQEPLGTVAPGASLSATARLFAGPQEESMLEAIT-----PGLDLVKDYGWLTVIA 347 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ + L+GN+G +I+ TV VKL+FFPL+ Y S A MK++QP++ +RE+ Sbjct: 348 KPLFWLLERIHALLGNWGWSIVALTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERH 407 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K PQ + + M+ LY+T +NPL GC PIL+QIPVF ++Y + S+EMR AP+ GW+ Sbjct: 408 KG-DPQKMNQEMMTLYRTEKVNPLGGCLPILIQIPVFMSLYWALLSSVEMRGAPWVGWVH 466 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DLAA D +F + +P VG+ PI+M++SMF+Q K++P P D QA ++ +M Sbjct: 467 DLAAPD--ALFGTYFGVP--------VGLLPILMAVSMFVQTKLNPTPPDPVQAKMMMFM 516 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P+ F FP+GL++YW +N +SI QQ I +M G Sbjct: 517 PLAFSVMFFFFPSGLVLYWVVNNCLSIAQQWSINRMLG 554 >gi|94312544|ref|YP_585754.1| putative inner membrane protein translocase component YidC [Cupriavidus metallidurans CH34] gi|166977403|sp|Q1LH91|OXAA_RALME RecName: Full=Inner membrane protein oxaA gi|93356396|gb|ABF10485.1| inner membrane insertion protein YidC/OxaA [Cupriavidus metallidurans CH34] Length = 555 Score = 328 bits (839), Expect = 2e-87, Method: Composition-based stats. Identities = 146/578 (25%), Positives = 239/578 (41%), Gaps = 48/578 (8%) Query: 1 MERNWNYFVAIALSVIIVYAW----------QNFYVYPRIEEMNNER----KNIQTVKQP 46 M+ + + S+ +V + F+ ++ V + Sbjct: 1 MDI-KRTILWVIFSMSLVLLYDNWQRANGHASMFFPSANTQQAAPAGAGGATPQADVPKA 59 Query: 47 NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 N + + V +A A + +V + + I+ G L L H + Sbjct: 60 NATNAAPGTVPAAPQAAAQPVGEKVTVTTDEVRAEIDTAGGILSRLELLNEHE---KDGA 116 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 V LL + Y A + + + L + Sbjct: 117 PVVLL-ERDVNRTYLARSGLIGGDLPNHTTVFTVAPGARTLAPGQDKLDVVLTAEKNGVK 175 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQEGFIAVLG 225 + Y+ VTN + + + R + + F G Sbjct: 176 FVKTYTFHKGSYVVDTRFDVTNTGTAAVSPTLYLELARDGSKVEKSQFYSTFTGPAIYTN 235 Query: 226 DKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 + + DI K + N W+ + Y+AS +IP F Sbjct: 236 ADKYHKLTFEDIAKGKATVPAATDNGWVAMVQHYFASAWIPQTGKQH--SFYAEQIDPNL 293 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y+ + PG +++T LFAG +E + P E++ D+GW +AK Sbjct: 294 YRVGIQQPLGQLAPGATVSTDARLFAGPQEERMLEQIT-----PGLELVKDYGWLTILAK 348 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + +GN+G +I+ TV +KL+FFPL+ Y S MK++QP++ +RE+ K Sbjct: 349 PLFWLLEKLHGFLGNWGWSIIGLTVLIKLVFFPLSAASYKSMGKMKDLQPRMTAIRERHK 408 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 PQ + + M+ LY+T +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ GWI D Sbjct: 409 G-DPQKMNQEMMALYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIHD 467 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I PI+M++SMF+Q +++P P D QA ++ MP Sbjct: 468 LSVPDPFY-------------------ILPIVMAVSMFVQTRLNPTPPDPVQAKVMMIMP 508 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +VF F FPAGL++YW +N++SI QQ I +M G Sbjct: 509 LVFSFMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGK 546 >gi|170697750|ref|ZP_02888837.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria IOP40-10] gi|170137365|gb|EDT05606.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria IOP40-10] Length = 553 Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats. Identities = 146/576 (25%), Positives = 238/576 (41%), Gaps = 45/576 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVD- 50 M+ I ++ WQ F+ T + Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAVAGGASGTGATTTAGEV 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + AA + + V+ G I+ +G L L+ P + + Sbjct: 61 PAAAAGTAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLYI 117 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNIL 167 +T + + + + T N + +KL F+ + Sbjct: 118 TLFDHTAGHTYLARTGLLGGDFPNHNDVYTQVNAGPTSLTGDQNALKLSFESPVKGGVKV 177 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGD 226 + Y+ + + N + + ++R T F G Sbjct: 178 VKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDA 237 Query: 227 KSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 K + +SD++K+ + N W+ + Y+AS +IP + A Y Sbjct: 238 KHFQKIDFSDLDKNKANFEKTADNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPALY 295 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + I PG+S LFAG +E + P E++ D+GW IAKP Sbjct: 296 RVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKP 350 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + VGN+G AI+L TV +K +FFPL+ Y S A MK I P++ LRE+F + Sbjct: 351 LFWLLEKIHGFVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-K 409 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL Sbjct: 410 SDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDL 469 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 + DP I P++M++SMF+Q ++P P D QA ++ +MP+ Sbjct: 470 SQRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPI 510 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 511 AFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 546 >gi|322506198|gb|ADX01652.1| YidC [Acinetobacter baumannii 1656-2] Length = 574 Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats. Identities = 137/588 (23%), Positives = 242/588 (41%), Gaps = 67/588 (11%) Query: 11 IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 + +++ AWQ Y E++ + N +T + V + A Sbjct: 2 FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVASDVPQANIAQSQT 61 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A A + ++ IN KG + L + SN P V L + + Sbjct: 62 TDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPFVMLENDAK--RT 119 Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164 Y A+ + ++ SG T + Sbjct: 120 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKVLTVPMVFKTPEG 179 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + Y + V N S + G++ R + + F + Sbjct: 180 VEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 239 Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271 G + K+++ + ++ W+ + Y+ S +IP + + Sbjct: 240 GGAWGTPDAHYNKLKFANFSEEKLN-TEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQPY 298 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++ + F++ I + G S+ L++G K + Sbjct: 299 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 353 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ Sbjct: 354 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 413 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++ ++E+F + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+ Sbjct: 414 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 472 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+RHAP+ GWI+DL+A DP I P+IM +MF Q ++P P Sbjct: 473 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 513 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 AD QA + MP++F + FPAGL++YW +N I+I+QQ I K Sbjct: 514 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINKS 561 >gi|33575018|emb|CAE39684.1| probable inner-membrane protein [Bordetella parapertussis] Length = 554 Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats. Identities = 150/571 (26%), Positives = 247/571 (43%), Gaps = 52/571 (9%) Query: 11 IALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + S ++ W N+ + P E ++ S + Sbjct: 1 MIFSFSLLLLWNNWQIHNGKPSLFGGPAPEAAATQQPKADANGTAASSTASIPSSPAAAP 60 Query: 62 AQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A A +V + L + + GAQ L Y S+ P V + Sbjct: 61 AAASVPGAAAPAAAKSEQVVITTDVLRLTFDSNGAQLIRAELLKYPSSSQSDKPTVLM-- 118 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVFKNANNILFER 170 + Y A+ V P T ++L+S + T + ++ + + Sbjct: 119 DRSADLVYVAQTGVVGAPQGESFPTHQTPFHLVSSERSLTGDTLDVVFEAESGGLKVTKT 178 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKS 228 Y + + N + + ++ R P ++ + G Sbjct: 179 YTLHRGRYDVDVRHAMANTGGAPLSPALYLQLERDGTDPAGTSSFYHTFTGVAVYSEQDK 238 Query: 229 LVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + +SDIEK + + N W+GI Y+A+ +IP++ ++ L Y A Sbjct: 239 FQKVTFSDIEKKKGTYIKQADNGWIGIVQHYFATAWIPAQGKQRTNEL--LQVQQNLYAA 296 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + TI PG S L+ G ++ + P E+++D+GW IAKP+F Sbjct: 297 RTIEAVGTIAPGSSANVDAHLWVGPQDQKAMAAVA-----PGLELVVDYGWLTIIAKPLF 351 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 LM++ + L+GN+G I+ TV +K +FFPLA Y S A MK + P++ L+EK+ Sbjct: 352 TLMTWLHGLLGNWGWTIVALTVIIKAVFFPLAAASYRSMARMKQVAPRLQALKEKYGD-D 410 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q L +AM+++Y+T INPL GC P+++QIPVF A+Y V+ S+EMR AP+ W+ DL+ Sbjct: 411 RQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAPWILWVHDLSV 470 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I P IM +MF+Q+K++P P D QA ++ MP+VF Sbjct: 471 RDPFF-------------------ILPAIMMATMFLQIKLNPTPPDPVQAKVMMIMPLVF 511 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FPAGL++YW +N +SI QQ I + Sbjct: 512 GGMMFFFPAGLVLYWCVNNTLSIAQQWTITR 542 >gi|187925954|ref|YP_001897596.1| inner membrane protein translocase component YidC [Burkholderia phytofirmans PsJN] gi|254772762|sp|B2T7U1|OXAA_BURPP RecName: Full=Inner membrane protein oxaA gi|187717148|gb|ACD18372.1| 60 kDa inner membrane insertion protein [Burkholderia phytofirmans PsJN] Length = 552 Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats. Identities = 146/574 (25%), Positives = 234/574 (40%), Gaps = 42/574 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51 M+ I ++ WQ F+ + T D Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTVGSAAPGTTTPGTQPADL 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A A + S V+ G I+ +G L+L +V L Sbjct: 61 PATNAAAPGNAPAATQSQLVKFNTDVYSGEIDTRGGTLSKLSLVN--KGDGKQPDLVITL 118 Query: 112 SPSNTKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 + Y A + N+ ++ + + Sbjct: 119 FDRTANHTYLARTGLLGGDFPNHNDIYTPLPNQQHDLTGDEKSFQLSFESPVKGGVKVIK 178 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKS 228 Y+ + + N + S ++R T F G Sbjct: 179 TYTFTRGSYVIGVDTKIQNVGTAPVTPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQHH 238 Query: 229 LVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + DI+K+ N W+ + Y+AS +IP + A Y+ Sbjct: 239 FQKMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQG--VKRDIYVEKIDPALYRV 296 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 TI PG+++ + LFAG +E + P E++ D+GW IAKP+F Sbjct: 297 GVKEPVPTIAPGQTVDVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLF 351 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ ++ VGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK Sbjct: 352 WLLEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG-D 410 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ Sbjct: 411 PQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQ 470 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I P++M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 471 QDPFF-------------------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAF 511 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 512 SVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|33568943|emb|CAE35357.1| probable inner-membrane protein [Bordetella bronchiseptica RB50] Length = 554 Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats. Identities = 150/571 (26%), Positives = 247/571 (43%), Gaps = 52/571 (9%) Query: 11 IALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + S ++ W N+ + P E ++ S + Sbjct: 1 MIFSFSLLLLWNNWQIHNGKPSLFGGPAPEAAATQQPKADANGTAASSTASIPSSPAAAP 60 Query: 62 AQALSMS---------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A A +V + L + + GAQ L Y S+ P V + Sbjct: 61 AAASVPGAAAPAAAKSEQVVITTDVLRLTFDSNGAQLIRAELLKYPSSSQSDKPTVLM-- 118 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPIKLVFKNANNILFER 170 + Y A+ V P T ++L+S + T + ++ + + Sbjct: 119 DRSADLVYVAQTGVVGAPQGESFPTHQTPFHLVSSERSLTGDTLDVVFEAESGGLKVTKT 178 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKS 228 Y + + N + + ++ R P ++ + G Sbjct: 179 YTLHRGRYDVDVRHAMANTGGAPLNPALYLQLERDGTDPAGTSSFYHTFTGVAVYSEQDK 238 Query: 229 LVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + +SDIEK + + N W+GI Y+A+ +IP++ ++ L Y A Sbjct: 239 FQKVTFSDIEKKKGTYIKQADNGWIGIVQHYFATAWIPAQGKQRTNEL--LQVQQNLYAA 296 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + TI PG S L+ G ++ + P E+++D+GW IAKP+F Sbjct: 297 RTIEAVGTIAPGSSANVDAHLWVGPQDQKAMAAVA-----PGLELVVDYGWLTIIAKPLF 351 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 LM++ + L+GN+G I+ TV +K +FFPLA Y S A MK + P++ L+EK+ Sbjct: 352 TLMTWLHGLLGNWGWTIVALTVIIKAVFFPLAAASYRSMARMKQVAPRLQALKEKYGD-D 410 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q L +AM+++Y+T INPL GC P+++QIPVF A+Y V+ S+EMR AP+ W+ DL+ Sbjct: 411 RQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRGAPWILWVHDLSV 470 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I P IM +MF+Q+K++P P D QA ++ MP+VF Sbjct: 471 RDPFF-------------------ILPAIMMATMFLQIKLNPTPPDPVQAKVMMIMPLVF 511 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + FPAGL++YW +N +SI QQ I + Sbjct: 512 GGMMFFFPAGLVLYWCVNNTLSIAQQWTITR 542 >gi|323527919|ref|YP_004230072.1| membrane protein insertase, YidC/Oxa1 family domain containing [Burkholderia sp. CCGE1001] gi|323384921|gb|ADX57012.1| membrane protein insertase, YidC/Oxa1 family domain containing [Burkholderia sp. CCGE1001] Length = 552 Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats. Identities = 147/575 (25%), Positives = 239/575 (41%), Gaps = 44/575 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51 M+ I ++ WQ F+ + T D Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTAGSAAPGTTTPGTQPADL 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + S V+ G I+ +G L+L + +V L Sbjct: 61 PATNAAAPANTPAAAQSQLVKFSTDVYSGEIDTRGGTLSKLSLVKQGDGKQPD--LVITL 118 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILF 168 + Y A + + + T+ ++ L F+ + Sbjct: 119 FDRTGNHTYLARTGLLG-GDFPNHNDVYTLMPNQQTELKGDQKSFSLSFESPVKGGVKVI 177 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDK 227 + Y+ + + N + S ++R T F G Sbjct: 178 KTYTFTRGSYVIGVDTKIQNVGTAPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQH 237 Query: 228 SLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + + DI+K+ + N W+ + Y+AS +IP + A Y+ Sbjct: 238 HFQKMTFGDIDKNKEDYAKQADNGWIAMVQHYFASAWIPQQG--VKRDIYVEKIDPALYR 295 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 I PG+++ + LFAG +E + P E++ D+GW IAKP+ Sbjct: 296 VGVKEPVAAIAPGQTVDVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPL 350 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ ++ VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK Sbjct: 351 FWLLEKIHSYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG- 409 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ Sbjct: 410 DPQKMNAALMELYKTEKVNPFGGCLPVVVQIPVFISLYWVLLSSVEMRGAPWILWIHDLS 469 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP I P++M++SMF+Q K++P P D QA ++ +MP+ Sbjct: 470 QQDPYF-------------------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIA 510 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 511 FSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|126668973|ref|ZP_01739912.1| putative inner membrane protein translocase component YidC [Marinobacter sp. ELB17] gi|126626557|gb|EAZ97215.1| putative inner membrane protein translocase component YidC [Marinobacter sp. ELB17] Length = 593 Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats. Identities = 141/591 (23%), Positives = 244/591 (41%), Gaps = 60/591 (10%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV--DNSYAAV 56 M+ A +S ++V AW Y P +E + + + + A Sbjct: 26 MDIKRIVLFAGLAVVSYLMVLAWNEDYHQPVPVAQTSEPVDFSAAGNNDTMTLPEAGDAN 85 Query: 57 LIDDRAQALSMSPR---------------VELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 A S V + +I+ +L Y ++ Sbjct: 86 TDSTGEFATPESETSLSNTNNVNNVSNQYVHVITDVFDITIDQVSGNLVSSSLLQYDREL 145 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV-WNLISGKILTPTTPIKL-- 158 + + P+ L + N Y E + N + ++ +L Sbjct: 146 NGDEPLKLLSNTQN--RLYVLESGLIGRDGPDNSRNGDAPVYSSTQNSYQMAEGENQLAV 203 Query: 159 ---VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 N+ + +R + Y I + N S ++ + + G+I+R + T+ Sbjct: 204 DLNYTTNSGVNIIKRFTFNRDDYQIDIRYLIDNRSENEWQANFTGKIVRDQAGDQTSQNS 263 Query: 216 V----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + G + + + + D++ I+ +N W+ Y+ + ++P + Sbjct: 264 MGIKAFLGLVVSTPEDPYEKYDFDDLKDKPINQ-SVTNGWMAFLQHYFLTAWVPEPDQQA 322 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 Q F + G+++ + G K + P + Sbjct: 323 QFQTTRR---GPLAVMGFVYPATNVPVGETVEVGASAYVGPKIIDRLETVA-----PNLD 374 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW +FI+ P+F+++++F+ ++GN+G++I+L TV VK LFF L+ Y S A M+ Sbjct: 375 RTVDFGWLFFISLPLFVVLNWFHGIIGNWGVSIILLTVLVKGLFFHLSATSYRSMARMRA 434 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + PK+ ++E + Q + M+ LYK INPL GC PIL+Q+PVF ++Y V+ S+ Sbjct: 435 VAPKLARMKELYGD-DRQRMSTEMMALYKREKINPLGGCLPILVQMPVFISLYWVLFESV 493 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 ++RHAPF WI DL+ DP I PIIM SM +QM ++P P Sbjct: 494 QLRHAPFALWIHDLSVMDPYF-------------------ILPIIMGASMMLQMHLNPTP 534 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 D QA I+ MPVVF FPAGL++YW +NV+SI QQ I + A Sbjct: 535 PDPMQAKIMKLMPVVFTIFFLWFPAGLVLYWVVNNVLSISQQWYITRKIEA 585 >gi|296137608|ref|YP_003644850.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Thiomonas intermedia K12] gi|295797730|gb|ADG32520.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Thiomonas intermedia K12] Length = 565 Score = 327 bits (837), Expect = 4e-87, Method: Composition-based stats. Identities = 134/583 (22%), Positives = 227/583 (38%), Gaps = 51/583 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDNS 52 + + ++ +++ + ++ + P V Q + Sbjct: 1 MDLRRSVLWVVFTMSMIFLYNSWLRYNGETDLFGTPPAHPAQVASAPTSAVPQAAPTTAT 60 Query: 53 YAAVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + LS ++ + I+ +G L Y Sbjct: 61 PPNIAGAAATAPLSAPVAAASAAPAAQLTTIRTDLMDVKISSRGGNLVYAKLLKYESRTE 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 +V L N Y A+ + + + Sbjct: 121 PGKNVV--LFDDTPSNKYMAQSGLIGGDFPNHETEMTVLPGPRDMGNAKTLQVKLVSPDL 178 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ---TATNTFGVQEG 219 L + Y+ + +T+TN + +++R ++ + G Sbjct: 179 GGIKLERTYTFTRDSYVVNVQNTITNTGSVAVAPQMYMQLVRDGNTPAGDESHFYHTYTG 238 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + ++ D++ + + + W+ + Y+ S ++P Sbjct: 239 PAYYDNANKFQKFEFKDLKTNE-APKKADSGWVAMIQHYFVSAWVPE-PYEGSRDLYTRK 296 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G Y I PGKSITT LF G + T+ P E++ D+GW Sbjct: 297 LGDNLYAVGVIQPLPQIAPGKSITTDAKLFVGPELESTLGALA-----PGLELVKDYGWV 351 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +AKP+F L+ + +V N+G +I++ T+ +KL FFPL Y S A MK + P+I+ L Sbjct: 352 TILAKPIFWLLEMIHKVVQNWGWSIIVLTLLIKLAFFPLTAASYKSMARMKAVGPRINAL 411 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE +K ++ +AM++LY+ INPL GC PI++QIPVF A+Y V+ S+E+R AP+ Sbjct: 412 RESYKGDQAKM-NQAMVELYRKEKINPLGGCLPIVIQIPVFIALYWVLLSSVELRGAPWI 470 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+A DP I P IM+ + F+Q+K++P P D QA + Sbjct: 471 LWIHDLSAKDPYY-------------------ILPAIMTATSFLQVKLNPTPPDPMQARL 511 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + MP F FPAGL++YW +N SI QQ I K G Sbjct: 512 MWIMPAAFSIMFFFFPAGLVLYWLTNNTTSIAQQWFINKKMGV 554 >gi|83747144|ref|ZP_00944187.1| 60 kDa inner membrane protein YIDC [Ralstonia solanacearum UW551] gi|207741912|ref|YP_002258304.1| preprotein translocase subunit yidc [Ralstonia solanacearum IPO1609] gi|83726119|gb|EAP73254.1| 60 kDa inner membrane protein YIDC [Ralstonia solanacearum UW551] gi|206593298|emb|CAQ60225.1| preprotein translocase subunit yidc [Ralstonia solanacearum IPO1609] Length = 563 Score = 327 bits (837), Expect = 4e-87, Method: Composition-based stats. Identities = 154/578 (26%), Positives = 250/578 (43%), Gaps = 41/578 (7%) Query: 1 MERNWNYFVAIALSVIIVYA---WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVD 50 M+ + + S+ +V WQ F+ P+ + Sbjct: 1 MDI-KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGGTPAGDVPKSA 59 Query: 51 NSYAAVLIDDR-----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + AA A S ++ + + +++ GA L L + Sbjct: 60 ATPAAAGSQAAPATGGASQTPASEKIVVTTDVIRATVDTAGAILTKLELLTQK---DHDG 116 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 V L + + Y A + + T + L Sbjct: 117 NPVVLF-DRSLERTYLARSGLIG-GDFPNHTTVFTASAGPRDLGTGGEVSLTLTADKGGA 174 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVL 224 L + + Y+ VTN+ I + + R + + G Sbjct: 175 KLAKTYVFKRGSYVIDTRFDVTNDGAAPISPTLYMELARDGGAVEQSRFYSTFTGPAVYT 234 Query: 225 GDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + +SDI+K N W+G+ Y+AS +IP+ +F Sbjct: 235 DADKFHKINFSDIDKGKAHVPAATDNGWVGMVQHYFASAWIPAASA--KREFYVDRVDTN 292 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ T+ PG S++ T LFAG +E + P +++ D+GW IA Sbjct: 293 FYRIGIQEPLGTVAPGASLSATARLFAGPQEESMLEAIT-----PGLDLVKDYGWLTVIA 347 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ + L+GN+G +I+ TV VKL+FFPL+ Y S A MK++QP++ +RE+ Sbjct: 348 KPLFWLLERIHALLGNWGWSIVALTVLVKLVFFPLSATSYRSMAKMKDLQPRMTAIRERH 407 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K PQ + + M+ LY+T +NPL GC PIL+QIPVF ++Y + S+EMR AP+ GW+ Sbjct: 408 KG-DPQKMNQEMMTLYRTEKVNPLGGCLPILIQIPVFMSLYWALLSSVEMRGAPWVGWVH 466 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DLAA D +F + +P VG+ PI+M++SMF+Q K++P P D QA ++ +M Sbjct: 467 DLAAPD--ALFGTYFGVP--------VGLLPILMAVSMFVQTKLNPTPPDPVQAKMMMFM 516 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P+ F FP+GL++YW +N +SI QQ I +M G Sbjct: 517 PLAFSVMFFFFPSGLVLYWVVNNCLSIAQQWSINRMLG 554 >gi|91785811|ref|YP_561017.1| putative inner membrane protein translocase component YidC [Burkholderia xenovorans LB400] gi|123167872|sp|Q13SH4|OXAA_BURXL RecName: Full=Inner membrane protein oxaA gi|91689765|gb|ABE32965.1| protein translocase subunit yidC [Burkholderia xenovorans LB400] Length = 552 Score = 327 bits (837), Expect = 4e-87, Method: Composition-based stats. Identities = 145/574 (25%), Positives = 234/574 (40%), Gaps = 42/574 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51 M+ I ++ WQ F+ T D Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTRTVGSAAPGTTTPGTQPADL 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A A + S ++ G I+ +G L+L + +V L Sbjct: 61 PATNAAAPGNAPAATQSQLIKFNTDVYSGEIDTRGGTLSKLSLVKQGDGKQPD--LVITL 118 Query: 112 SPSNTKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 + Y A + N+ ++ + + Sbjct: 119 FDRTANHTYLARTGLLGGDFPNHNDIYTPLPNQPHDLTGDEKSFQISFESPVKGGVKVIK 178 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKS 228 Y+ + + N + S ++R T F G Sbjct: 179 TYTFTRGSYVIGVDTKIQNVGTTPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQHH 238 Query: 229 LVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + DI+K+ N W+ + Y+AS +IP + A Y+ Sbjct: 239 FQKMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQGA--KRDIYVEKIDPALYRV 296 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 TI PG+++ + LFAG +E + P E++ D+GW IAKP+F Sbjct: 297 GVKEPVPTIAPGQTVDVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLF 351 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ ++ VGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK Sbjct: 352 WLLEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG-D 410 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ Sbjct: 411 PQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQ 470 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I P++M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 471 QDPFF-------------------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAF 511 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 512 SVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|83649689|ref|YP_438124.1| putative inner membrane protein translocase component YidC [Hahella chejuensis KCTC 2396] gi|123529916|sp|Q2S6M5|OXAA_HAHCH RecName: Full=Inner membrane protein oxaA gi|83637732|gb|ABC33699.1| Preprotein translocase subunit YidC [Hahella chejuensis KCTC 2396] Length = 570 Score = 327 bits (837), Expect = 4e-87, Method: Composition-based stats. Identities = 139/565 (24%), Positives = 246/565 (43%), Gaps = 56/565 (9%) Query: 21 WQNFYVYPRIEEMNNERKNIQTVKQPNQ---------------VDNSYAAVLIDDRAQAL 65 W + I + + + A + + Sbjct: 23 WNEDMSPQQQPVAQTPSVTIDSNGADSSALLNSPNTGELDTPETASKPATAEDSNISSTA 82 Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELD 125 S + + L I+L G + +L Y + + + +P+ + N Y A Sbjct: 83 SSGKIITVITDVLRVEIDLNGGNVVEASLLQYPISLKNPTPLDLM--QKNNGVYYVAASS 140 Query: 126 YVSTANNIELPNSNTVWNLISGKILT-----PTTPIKLVFKNANNILFERTISLDEHYLF 180 + + N + + + L + + +R Y Sbjct: 141 LIGANGFDDSKNGGNPIYIAEKNSYSLQEGQDKLSVDLRTERDGVTIVKRYEFEKSSYSI 200 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEGFIAVLGDKSLVEQKYSD 236 + + N S + + +++R K T + G G + +K + +SD Sbjct: 201 NVNFQINNQSDAPWKANFSAKLVRDKSPDPTFSGGFGAASFLGAVVSTPEKPYEKIDFSD 260 Query: 237 IEKSSIS--NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 +E+S S + SN W+ Y+ S +IP + Q + + Y F E Sbjct: 261 MEESGPSGVKVNSSNGWIAFIQHYFVSAWIPLSNDTHTYQTRLRNG---LYLMGFVDPEF 317 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 T+ PG++ L+AG K T+ P ++ +D+GW + IAKP+++++ + + Sbjct: 318 TVEPGQTHNVGAKLYAGPKIMETLKEVA-----PNLDLTVDFGWLWLIAKPLYLVLEFIH 372 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+GIAI+L TV +K LFF L+ Y S ANM+ + P++ +RE++ Q + +A Sbjct: 373 DYVGNWGIAIILLTVLIKALFFHLSATSYRSMANMRRVTPEMQRIREQYGD-DRQRMSQA 431 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK INPL GC P+L+Q+PVF ++Y V+ S+++R APF+ WI+DL+ DP Sbjct: 432 MMELYKKEKINPLGGCLPMLVQMPVFISLYWVLLESVQLRQAPFFFWIQDLSIKDPYF-- 489 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + P++M +MF+Q ++P P D QA ++ MP++F F Sbjct: 490 -----------------VLPLLMGAAMFLQTSLNPTPPDPIQARVMKMMPIIFTVFFLWF 532 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKM 559 PAGL++YW +N++SI QQ I K Sbjct: 533 PAGLVLYWLVNNILSIAQQWYITKK 557 >gi|39998555|ref|NP_954506.1| hypothetical protein GSU3466 [Geobacter sulfurreducens PCA] gi|81700814|sp|Q746Q2|OXAA_GEOSL RecName: Full=Inner membrane protein oxaA gi|39985502|gb|AAR36856.1| membrane protein, putative [Geobacter sulfurreducens PCA] gi|298507497|gb|ADI86220.1| preprotein translocase subunit YidC [Geobacter sulfurreducens KN400] Length = 531 Score = 326 bits (836), Expect = 4e-87, Method: Composition-based stats. Identities = 152/559 (27%), Positives = 252/559 (45%), Gaps = 35/559 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME +A+ LS++ Y + + P E Q+ QV + V + Sbjct: 1 ME--KRALIAVVLSILFFYGYTALFSPPPKETPKPVATATQSQPA-QQVTAAPVPVAVPA 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + Q + V + P+ + + +G L+L+ YH VTL+S N N Sbjct: 58 QPQPAVAARDVSVDTPAYSVTFSTQGGSIKRLDLKRYHETAGPGGKNVTLVSEDNPSN-- 115 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 + + ++ + + + + +T + Sbjct: 116 -YTIGLRAPGFGLDQNAVFVPSADALTVGPGEKKQLSFTWVSPAGVTVTKTYNFSGDGYG 174 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + NS SP + + + A L E K D+ Sbjct: 175 LEIQYQVTNSGSARVSSPVQTVQTYPLVPKVKESRFETFGPATFAQDKLFEDKVKDL--E 232 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 S + H + W G +DKY+ S + + + + + + G+ S+ E+++ PG+ Sbjct: 233 SGAKTHAAPLWSGFADKYFLSAVLAHEGSMAAATIRKTASGYLENTI--SSPELSLNPGE 290 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 T LF G K+ + E I+ GWF +AKP+ + +F+N GN+ Sbjct: 291 GRALTYRLFFGPKDIDVLKAQGNS-----LERAINLGWFAMLAKPLLHSLKFFHNYTGNY 345 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 GIAI++ TV +K++F+PL Y S M+ +QPK+ +LREK+K + + +AM++LY+ Sbjct: 346 GIAIIIITVIIKVIFYPLTHSSYKSMKEMQKLQPKMQQLREKYKN-DREAMNRAMMELYQ 404 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 TH +NP+ GC P+L+QIPVFFA+YK + S+E+RHAPF WI DLAA DP Sbjct: 405 THKVNPVGGCLPMLVQIPVFFALYKALMFSIELRHAPFMLWITDLAAKDPYY-------- 456 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + PIIM ++M IQ KM+P D Q ++ +PVVF F +FP+GL++ Sbjct: 457 -----------VTPIIMGVTMVIQQKMTPSQMDPVQQKMMMALPVVFTFMFLNFPSGLVL 505 Query: 541 YWSWSNVISIVQQAVIMKM 559 YW +NV++I+QQ I + Sbjct: 506 YWLVNNVLTIIQQYYINRS 524 >gi|307731536|ref|YP_003908760.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Burkholderia sp. CCGE1003] gi|307586071|gb|ADN59469.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Burkholderia sp. CCGE1003] Length = 552 Score = 326 bits (836), Expect = 5e-87, Method: Composition-based stats. Identities = 147/575 (25%), Positives = 237/575 (41%), Gaps = 44/575 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51 M+ I ++ WQ F+ + T D Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTAGSAAPGTTTPGTQPADL 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + S V+ G I+ +G L+L +V L Sbjct: 61 PATNAAAPANTPAATQSQLVKFSTDVYSGEIDTRGGTLSKLSLVK--EGDGKQPDLVITL 118 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILF 168 + Y A + + + T+ + L F+ + Sbjct: 119 FDRTGNHTYLARTGLLG-GDFPNHNDVYTLMPNQQTDLKGDQKSFSLSFESPVKGGLKVI 177 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDK 227 + Y+ + + N + S ++R T F G Sbjct: 178 KTYTFTRGSYVIGVDTKIQNVGTTPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQH 237 Query: 228 SLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + + DI+K+ + N W+ + Y+AS +IP + A Y+ Sbjct: 238 HFQKMTFGDIDKNKEDYAKQADNGWIAMVQHYFASAWIPQQG--VKRDIYVEKIDPALYR 295 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 I PG+++ + LFAG +E + P E++ D+GW IAKP+ Sbjct: 296 VGVKQPVAAIAPGQTVDVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPL 350 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ ++ VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK Sbjct: 351 FWLLEKIHSYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG- 409 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ Sbjct: 410 DPQKMNAALMELYKTEKVNPFGGCLPVVVQIPVFISLYWVLLSSVEMRGAPWILWIHDLS 469 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP I P++M++SMF+Q K++P P D QA ++ +MP+ Sbjct: 470 QQDPYF-------------------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIA 510 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 511 FSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|239993746|ref|ZP_04714270.1| inner membrane protein, 60 kDa [Alteromonas macleodii ATCC 27126] Length = 552 Score = 326 bits (836), Expect = 5e-87, Method: Composition-based stats. Identities = 146/577 (25%), Positives = 264/577 (45%), Gaps = 44/577 (7%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME + + +AL S ++ +WQ Y + + ++ + P+ +N V Sbjct: 1 MESQRSFLIIGLALVSFLLWQSWQKDYGPQPVVPVEQQQTQETSQGVPSFNENGSEDVPS 60 Query: 59 DDRAQAL-------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 D A S + +E+K +L I+L G +L + ++ S+ P L Sbjct: 61 SDSVPAAQPIAAAQSSNRIIEVKTDTLDLRIDLLGGDVVSADLLKFPVEQGSDIPYSLLR 120 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLIS--GKILTPTTPIKLVFKNANNILFE 169 S + Y A+ + + V+N S ++ + T I L +KN + Sbjct: 121 SGNG---LYVAQSGLIGAQGPDASSSGRPVYNAQSDYYEMTSDTLVIPLTWKNNQGLSVT 177 Query: 170 RTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 +T + Y + +V N + P ++ + + A + Sbjct: 178 KTFTFTKGQYDVNVSYSVENGTGSAATVQPYAQLKQVMEFEDDGNMFMPTYRGAAFSTED 237 Query: 229 LVEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 QKY D + W+G+ + Y+ S ++PS+E + + L + +A Sbjct: 238 DRYQKYSFDEIEDDNLRETTKAGWVGMLEHYFVSAWVPSQEQTNTLYSRNLKNQYAV--I 295 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + ++ PG++ T + L+ G K+ ++ + ++ +D+G ++I++P+F Sbjct: 296 GVLSPSESVAPGETKTLASTLYMGPKDQESLAKIAR-----GLDLTVDYGILFWISQPLF 350 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+++ ++LV N+G+AI+L T+ VK + L KKQY S A M+N+ PK+ +L+++F Sbjct: 351 ALLTFLHSLVNNWGVAIILITIVVKGAMYWLTKKQYESMARMRNLAPKMQQLKDRFGD-D 409 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + +AM++LY+ +NP+ GC P+LLQ+P+F A+Y V+ S+E+RHA F WI DL+ Sbjct: 410 RQKMSQAMMELYRKEKVNPMGGCLPLLLQMPIFLALYWVLMESVELRHADFVLWITDLST 469 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP + PI+ SM++ K+ P D Q I+ WMPV Sbjct: 470 KDPYF-------------------VLPILTGASMYLLQKLQPTTITDPMQQKIMQWMPVA 510 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL++YW SNVI++VQ +I Sbjct: 511 MSVFFLWFPAGLVLYWLVSNVITLVQAKMIYASMEKR 547 >gi|169634939|ref|YP_001708675.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii SDF] gi|184156329|ref|YP_001844668.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii ACICU] gi|260558089|ref|ZP_05830300.1| membrane protein insertase, YidC/Oxa1 family domain [Acinetobacter baumannii ATCC 19606] gi|332873303|ref|ZP_08441258.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6014059] gi|169153731|emb|CAP02932.1| Inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase [Acinetobacter baumannii] gi|183207923|gb|ACC55321.1| Preprotein translocase subunit YidC [Acinetobacter baumannii ACICU] gi|260408443|gb|EEX01750.1| membrane protein insertase, YidC/Oxa1 family domain [Acinetobacter baumannii ATCC 19606] gi|332738509|gb|EGJ69381.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6014059] Length = 586 Score = 326 bits (836), Expect = 5e-87, Method: Composition-based stats. Identities = 137/588 (23%), Positives = 242/588 (41%), Gaps = 67/588 (11%) Query: 11 IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 + +++ AWQ Y E++ + N +T + V + A Sbjct: 14 FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVASDVPQANIAQSQT 73 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A A + ++ IN KG + L + SN P V L + + Sbjct: 74 TDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPFVMLENDAK--RT 131 Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164 Y A+ + ++ SG T + Sbjct: 132 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKVLTVPMVFKTPEG 191 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + Y + V N S + G++ R + + F + Sbjct: 192 VEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 251 Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271 G + K+++ + ++ W+ + Y+ S +IP + + Sbjct: 252 GGAWGTPDAHYNKLKFANFSEEKLN-TEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQPY 310 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++ + F++ I + G S+ L++G K + Sbjct: 311 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 365 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 425 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++ ++E+F + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+ Sbjct: 426 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+RHAP+ GWI+DL+A DP I P+IM +MF Q ++P P Sbjct: 485 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 525 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 AD QA + MP++F + FPAGL++YW +N I+I+QQ I K Sbjct: 526 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINKS 573 >gi|238753999|ref|ZP_04615358.1| hypothetical protein yruck0001_29200 [Yersinia ruckeri ATCC 29473] gi|238707751|gb|EEQ00110.1| hypothetical protein yruck0001_29200 [Yersinia ruckeri ATCC 29473] Length = 529 Score = 326 bits (836), Expect = 5e-87, Method: Composition-based stats. Identities = 139/556 (25%), Positives = 236/556 (42%), Gaps = 54/556 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AWQ + + + N T +Q A + +K Sbjct: 1 MIWQAWQVDNNPQTVAQTTQQTSNAATGDTASQAVP------------ASGQGQLITVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 L +IN +G + NL Y + S+ L + Y A+ Sbjct: 49 DVLSLTINTRGGDIEQANLLAYPDSLGSDKTFELL--ETTPAFVYQAQSGLTGKNGPDNP 106 Query: 136 PNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL-FKIVDTVTNN 189 N + I L F + +F +T + + + V N Sbjct: 107 ANGERPLFAAAQNSFVLADGQDELRIPLTFTAKDGSVFTKTFIVKRNDYAIGVDYQVKNA 166 Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQKY-SDIEKSSIS 243 S + + G++ + T +N F + A QKY D + + Sbjct: 167 SAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDEDNYQKYAFDKIEKNPL 226 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N W+ + +Y+A+ +IP + F G+ F + + PG+ Sbjct: 227 NITTKGGWVAMLQQYFATAWIPEANE--TNTFYSADLGNGLAAIGFKGTPVVVQPGEQKQ 284 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 L+ G + + P ++ +D+GW +FI++P+F L+ + + VGN+G + Sbjct: 285 LAATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFKLLKFIHGFVGNWGFS 339 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + + M+ LYK Sbjct: 340 IIVITFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERIGDDK-QRMSQEMMALYKAEK 398 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP Sbjct: 399 VNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYY----------- 447 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M ++MF KMSP D Q I+ +MPV+F FPAGL++Y+ Sbjct: 448 --------ILPILMGITMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGLVLYY 499 Query: 543 SWSNVISIVQQAVIMK 558 SN+++I+QQ +I + Sbjct: 500 IVSNLVTILQQQLIYR 515 >gi|238028969|ref|YP_002913200.1| putative inner membrane protein translocase component YidC [Burkholderia glumae BGR1] gi|237878163|gb|ACR30496.1| Putative inner membrane protein translocase component YidC [Burkholderia glumae BGR1] Length = 553 Score = 326 bits (836), Expect = 5e-87, Method: Composition-based stats. Identities = 147/584 (25%), Positives = 238/584 (40%), Gaps = 52/584 (8%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51 M+ I ++ WQ F+ + + T Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRAHGRQSMFFPNVTQTNVAASKGGADTGASAASGAT 60 Query: 52 ---SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A+ ++ + V G I+ +G L L+ + Sbjct: 61 AALPAASTQAPAATTPIAQAQLVPFSTDVYDGEIDTRGGTLTKLTLKK--EGDGKQPDLF 118 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV-----FKNA 163 L + Y A PN N ++ +SG L + Sbjct: 119 VTLFDHTKDHTYLARTGVTGGN----FPNHNDLFTPLSGPRSLAAGQDTLKLSFESQEKG 174 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIA 222 + + Y+ + + N + + I+R T F G Sbjct: 175 GVKVVKTYTFTRGSYVIGVDTKIENVGTAPVTPTVYMEIVRDSTPVETPLFSHTFLGPAV 234 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 K + +SDI+K+ N W+ + Y+AS +IP Sbjct: 235 YTDQKHFQKITFSDIDKNKAEYVTSADNGWVAMVQHYFASAWIPQAG--VKRDIYVEKID 292 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + Y+ TI PG+S + LFAG +E + P +++ D+GW Sbjct: 293 PSLYRIGVKEPVKTIEPGQSADVSARLFAGPEEERVLEGIA-----PGLDLVKDYGWVTI 347 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+F L+ + VGN+G +I+L TV +K +FFPL+ Y S A MK I P++ +LRE Sbjct: 348 IAKPLFWLLQKIHGYVGNWGWSIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQQLRE 407 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 +F +S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ W Sbjct: 408 RF-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILW 466 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I DL+ DP I P++M+ SMF+Q +++P P D QA ++ Sbjct: 467 IHDLSQRDPYF-------------------ILPVLMAGSMFLQTRLNPTPPDPVQAKMMM 507 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 +MP+ F FPAGL++Y+ +NV+SI QQ I + G + Sbjct: 508 FMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRAIGNKKK 551 >gi|169797810|ref|YP_001715603.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii AYE] gi|213155394|ref|YP_002317439.1| inner membrane protein OxaA [Acinetobacter baumannii AB0057] gi|215485157|ref|YP_002327398.1| Inner membrane protein oxaA [Acinetobacter baumannii AB307-0294] gi|301345949|ref|ZP_07226690.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii AB056] gi|301510086|ref|ZP_07235323.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii AB058] gi|301594676|ref|ZP_07239684.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii AB059] gi|332854709|ref|ZP_08435496.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6013150] gi|332865589|ref|ZP_08436429.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6013113] gi|169150737|emb|CAM88649.1| Inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase [Acinetobacter baumannii AYE] gi|213054554|gb|ACJ39456.1| inner membrane protein OxaA [Acinetobacter baumannii AB0057] gi|213985979|gb|ACJ56278.1| Inner membrane protein oxaA [Acinetobacter baumannii AB307-0294] gi|332727866|gb|EGJ59268.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6013150] gi|332735241|gb|EGJ66318.1| membrane protein insertase, YidC/Oxa1 family domain protein [Acinetobacter baumannii 6013113] Length = 586 Score = 326 bits (835), Expect = 6e-87, Method: Composition-based stats. Identities = 137/588 (23%), Positives = 242/588 (41%), Gaps = 67/588 (11%) Query: 11 IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 + +++ AWQ Y E++ + N +T + V + A Sbjct: 14 FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVASDVPQANIAQSQT 73 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A A + ++ IN KG + L + SN P V L + + Sbjct: 74 TDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPFVMLENDAK--RT 131 Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164 Y A+ + ++ SG T + Sbjct: 132 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKVLTVPMVFKTPEG 191 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + Y + V N S + G++ R + + F + Sbjct: 192 VEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 251 Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271 G + K+++ + ++ W+ + Y+ S +IP + + Sbjct: 252 GGAWGTPDAHYNKLKFANFSEEKLN-TEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQPY 310 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++ + F++ I + G S+ L++G K + Sbjct: 311 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 365 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 425 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++ ++E+F + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+ Sbjct: 426 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+RHAP+ GWI+DL+A DP I P+IM +MF Q ++P P Sbjct: 485 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 525 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 AD QA + MP++F + FPAGL++YW +N I+I+QQ I K Sbjct: 526 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINKS 573 >gi|296157622|ref|ZP_06840457.1| membrane protein insertase [Burkholderia sp. Ch1-1] gi|295892394|gb|EFG72177.1| membrane protein insertase [Burkholderia sp. Ch1-1] Length = 552 Score = 326 bits (835), Expect = 6e-87, Method: Composition-based stats. Identities = 146/575 (25%), Positives = 238/575 (41%), Gaps = 44/575 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51 M+ I ++ WQ F+ + T D Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTVGGAAPGTTTPGTQPADL 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A A + S ++ G I+ +G L+L P + + Sbjct: 61 PATNAAAPGNAPAATQSQLIKFNTDVYSGEIDTRGGTLSKLSLVN---KGDGKQPDLVIT 117 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILF 168 T N + + + + T + +L F+ + Sbjct: 118 LFDRTANHTYLARTGLLGGDFPNHNDIYTPLPNQPHDLTGDEKSFQLSFESPVKGGLKVI 177 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDK 227 + Y+ + + N + S ++R T F G Sbjct: 178 KTYTFTRGSYVIGVDTKIQNVGATPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQH 237 Query: 228 SLVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + + DI+K+ N W+ + Y+AS +IP + A Y+ Sbjct: 238 HFQKMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQG--VKRDIYVEKIDPALYR 295 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 TI PG+++ + LFAG +E + P E++ D+GW IAKP+ Sbjct: 296 VGVKEPVPTIAPGQTVDVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPL 350 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ ++ VGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK Sbjct: 351 FWLLEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG- 409 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ Sbjct: 410 DPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLS 469 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP I P++M++SMF+Q K++P P D QA ++ +MP+ Sbjct: 470 QQDPFF-------------------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIA 510 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 511 FSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|255020154|ref|ZP_05292223.1| OxaI/YidC membrane insertion protein [Acidithiobacillus caldus ATCC 51756] gi|254970296|gb|EET27789.1| OxaI/YidC membrane insertion protein [Acidithiobacillus caldus ATCC 51756] Length = 538 Score = 326 bits (835), Expect = 6e-87, Method: Composition-based stats. Identities = 149/575 (25%), Positives = 247/575 (42%), Gaps = 60/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 M+ +A+ LS+I++ ++ + Q+ Sbjct: 1 MDTQR-TLLAVVLSIIVLVLYEQWMAPKPTHPAAAPTAVTQSATAKPAPAPTSATATAPS 59 Query: 52 -------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 S L+ +P V GS++L G L L+ Y S Sbjct: 60 TSAAATLSGTVTSGLASPAELAAAPSVPFATQVYQGSVSLLGGDIVHLGLKHYPTSSSDK 119 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +P L T + ++L T + A Sbjct: 120 APYPIL-----------TPESARLTLQQSGFRALDGQILQGRYRLLQDTGHTLIFQGEAG 168 Query: 165 NILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + E+T+ + YL VTN S +I+R+ + + G + + Sbjct: 169 PLRIEKTLEFAPDSYLIHETVRVTNGGSSDWNGSYLDQILRNDRSESHWFMSIFTGAVLM 228 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 S E+ +SD+ + W G++D Y+ +P + + + Sbjct: 229 HN-GSFSEKSFSDLRSHPED--WSGSGWAGMTDHYFLEAILPEPKATGQIYARAEGPNS- 284 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 A + + PG+S T L+ G KE T+ + E +D+GWF IA Sbjct: 285 --VAGVAVALPRLAPGQSTTIEQDLYLGPKEQKTLSSLGR-----GLEQTVDYGWFAIIA 337 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +PM ++S+F++ GN+G+AI+L + VK+LFF + Y S ANM+ +QPK+++++ K Sbjct: 338 EPMHGVLSWFHSWTGNWGLAIVLLVLAVKILFFYPSAISYRSMANMRKLQPKLEQIK-KQ 396 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q + AM++LY++ +NP+AGC PI++Q+PVF A+Y V+ S+ +R APF WI Sbjct: 397 YGEDRQKMGAAMMELYRSEKVNPMAGCLPIVIQMPVFIALYWVLVESVSLRMAPFVLWIH 456 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DLAA DP I P++M +SMFIQ +++P P D Q IL+ + Sbjct: 457 DLAAPDPYY-------------------ILPLLMGVSMFIQQRLNPAPMDPMQKKILSAL 497 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 PV+F S FPAGL++YW +NV+SI QQ +I + Sbjct: 498 PVIFAIFFSFFPAGLVLYWLTNNVVSIAQQYLITR 532 >gi|313669125|ref|YP_004049409.1| integral membrane protein [Neisseria lactamica ST-640] gi|313006587|emb|CBN88052.1| putative integral membrane protein [Neisseria lactamica 020-06] Length = 545 Score = 326 bits (834), Expect = 8e-87, Method: Composition-based stats. Identities = 138/575 (24%), Positives = 234/575 (40%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q V + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPTPQQAAQQQAVTASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y + P V L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDEHKPFV--LFGDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + ++L N + ++ + YL Sbjct: 104 VAQSELLDAQGNNVLKGIGFTAAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237 + +TN S RI+R + Q + G + + + +SD+ Sbjct: 164 VNVRFDITNTGGKPANLSADYRIVRDRSQPEGQGYFTRSYLGPVVYTPEGGFQKVGFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCAAGECNIDIKRRNDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A I G T L+AG + I + ++ D+G ++ A Sbjct: 284 YSASVGVPLAAIPAGAKAETAVNLYAGPQTTSVIAGIAD-----KLQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ +DP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 458 LSRSDPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|294341966|emb|CAZ90395.1| Inner membrane protein oxaA [Thiomonas sp. 3As] Length = 565 Score = 326 bits (834), Expect = 8e-87, Method: Composition-based stats. Identities = 134/583 (22%), Positives = 229/583 (39%), Gaps = 51/583 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDNS 52 + + ++ +++ + ++ + P V Q + Sbjct: 1 MDLRRSVLWVVFTMSMIFLYNSWLRYNGETDLFGTPPAHPAQVASAPTSAVPQAAPTAAT 60 Query: 53 YAAVLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 + LS ++ + I+ +G L Y + Sbjct: 61 PPNIAGAAATAPLSAPVAAASAAPAAQLTTIRTDLMDVKISSRGGNLVYAKLLKY-ESRT 119 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 V L + + N Y A+ + + + Sbjct: 120 EPGKNVILFDDTPS-NIYMAQSGLIGGDFPNHETEMTVLPGPRDMGNAKTLQVKLVSPDL 178 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ---TATNTFGVQEG 219 L + Y+ + +T+TN + +++R ++ + G Sbjct: 179 GGIKLERTYTFTRDSYVVNVQNTITNTGSVAVAPQMYMQLVRDGNTPAGDESHFYHTYTG 238 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + ++ D++ + + + W+ + Y+ S ++P Sbjct: 239 PAYYDNANKFQKFEFKDLKTNE-APKKADSGWVAMIQHYFVSAWVPE-PYEGSRDLYTRK 296 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 G Y I PGKSITT LF G + T+ P E++ D+GW Sbjct: 297 LGDNLYAVGVIQPLSQIAPGKSITTDAKLFVGPELESTLGALA-----PGLELVKDYGWV 351 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +AKP+F L+ + +V N+G +I++ T+ +KL FFPL Y S A MK + P+I+ L Sbjct: 352 TILAKPIFWLLEMIHKVVQNWGWSIIVLTLLIKLAFFPLTAASYKSMARMKAVGPRINAL 411 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE +K ++ +AM++LY+ INPL GC PI++QIPVF A+Y V+ S+E+R AP+ Sbjct: 412 RESYKGDQAKM-NQAMVELYRKEKINPLGGCLPIVIQIPVFIALYWVLLSSVELRGAPWI 470 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+A DP I P IM+ + F+Q+K++P P D QA + Sbjct: 471 LWIHDLSAKDPYY-------------------ILPAIMTATSFLQVKLNPTPPDPMQARL 511 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + MP F FPAGL++YW +N SI QQ I K G Sbjct: 512 MWIMPAAFSIMFFFFPAGLVLYWLTNNTTSIAQQWFINKKMGV 554 >gi|262374715|ref|ZP_06067987.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter junii SH205] gi|262310371|gb|EEY91463.1| YidC/Oxa1 family membrane protein insertase [Acinetobacter junii SH205] Length = 585 Score = 326 bits (834), Expect = 8e-87, Method: Composition-based stats. Identities = 138/588 (23%), Positives = 245/588 (41%), Gaps = 68/588 (11%) Query: 11 IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 + +++ AWQ Y + E++ + N Q + + + Sbjct: 14 FVTAYLLILAWQKDYGHAQPAPQQQAAAVTTHEVSADLPNAQNATAASDLPQAN-VTASQ 72 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + +K IN KG + L + S P V L S+ K Sbjct: 73 TTEKPSVNQQLISVKTDLYHLWINPKGGDIVRVELLSHDESKDSEKPFVML--ESDAKRT 130 Query: 120 YFAELDYVSTANNIELPNSNTVWNLI--------------SGKILTPTTPIKLVFKNANN 165 Y A+ + + +++ + + LVFK Sbjct: 131 YVAQSGLIGLNGPDSSRSGRPTYDVEKTTYTLADAKSITTQDEKKQQVLTVPLVFKTPEG 190 Query: 166 ILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + ++ + Y + V N S + G++ R + F + Sbjct: 191 VEIIKSFTFTQGDYPITVKHQVINRSQQNWQGQMFGQLKRDNSDDPGKSSQGIFTLGTYL 250 Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271 G + K+ + ++ W+ I Y+ S +IP + + Sbjct: 251 GGAWGTPEEHYNKLKFENFNDEKLN-VEAKGGWVAIVQHYFVSAWIPGNLKLTQADGQPY 309 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++ + F++ I + G S+ L++G K + Sbjct: 310 TAKLESRQSTDGMNIIGFTSPVINVPAGTSMEVDAKLYSGPKIQSELKDLAD-----GLN 364 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW + IAK +F+ + +F+NLVGN+G +I+L T+ VKL+ +PL+ K Y S A M+ Sbjct: 365 QTVDYGWLWPIAKLLFLGLQFFHNLVGNWGWSIILLTILVKLILWPLSSKSYRSMAKMRV 424 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++ ++E+F + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+ Sbjct: 425 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 483 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+RHAP+ GWI+DL+A DP I P+IM ++M++Q ++P P Sbjct: 484 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGVTMYVQQMLNPQP 524 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 D QA + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 525 TDPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINKS 572 >gi|239503913|ref|ZP_04663223.1| putative inner membrane protein translocase component YidC [Acinetobacter baumannii AB900] Length = 586 Score = 326 bits (834), Expect = 9e-87, Method: Composition-based stats. Identities = 137/588 (23%), Positives = 242/588 (41%), Gaps = 67/588 (11%) Query: 11 IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 + +++ AWQ Y E++ + N +T + V + A Sbjct: 14 FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVASDVPQANIAQSQT 73 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A A + ++ IN KG + L + SN P V L + + Sbjct: 74 TDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPFVMLENDAK--RT 131 Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164 Y A+ + ++ SG T + Sbjct: 132 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKVLTVPMVFKTPEG 191 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + Y + V N S + G++ R + + F + Sbjct: 192 VEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 251 Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271 G + K+++ + ++ W+ + Y+ S +IP + + Sbjct: 252 GGAWGTPDAHYNKLKFANFSEEKLN-TEAKGGWVAMVQHYFVSAWIPGNLKLTQANGQPY 310 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++ + F++ I + G S+ L++G K + Sbjct: 311 VAKLESRQSADNMNIIGFTSPVINVPVGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 365 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 425 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++ ++E+F + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+ Sbjct: 426 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+RHAP+ GWI+DL+A DP I P+IM +MF Q ++P P Sbjct: 485 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 525 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 AD QA + MP++F + FPAGL++YW +N I+I+QQ I K Sbjct: 526 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINKS 573 >gi|220936473|ref|YP_002515372.1| protein translocase subunit YidC [Thioalkalivibrio sp. HL-EbGR7] gi|254778168|sp|B8GRD1|OXAA_THISH RecName: Full=Inner membrane protein oxaA gi|219997783|gb|ACL74385.1| protein translocase subunit YidC [Thioalkalivibrio sp. HL-EbGR7] Length = 557 Score = 326 bits (834), Expect = 9e-87, Method: Composition-based stats. Identities = 133/577 (23%), Positives = 248/577 (42%), Gaps = 48/577 (8%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPRIEEMNNERKNIQ---TVKQPNQVDNSYAA 55 M+ + + +I AW Y + + + + P V ++ + Sbjct: 1 MDNLRPVLYLSMLLVLFLIWQAWNRDYGPQPVAAPGAQEQVMDRDGVPAPPQDVPDAPVS 60 Query: 56 VLIDDRAQALSMSP---RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 +D + P R+ + L I+ +G +L Y + + + + LL Sbjct: 61 EAVDAPTEVAPAEPDRRRIRVVTDVLDIEIDTRGGDLVRADLPTYPVSLRTPDQPIRLLD 120 Query: 113 PSNTKNAYFAELDYVST-----ANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNA 163 Y A+ + + P+ + ++ + + L + + Sbjct: 121 ER--FRQYVAQSGLIHDRVPGVSGEGRAPSHHAIFQAERDEFRLADGQDELRVPLTWTSE 178 Query: 164 NNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 + + +T + +L + V NNS +I + + F +A Sbjct: 179 DGVQVTKTYTFRRGDFLINVDHAVRNNSDQPWVGRQYRQIRHGSTPSRESWFLYTFTGVA 238 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL-SDG 281 + D+ + W+ I Y+ + ++P + + L + Sbjct: 239 YHD-GRYEKLSLEDMAGKPLDK-DVQGGWISIIQHYFLTAWVPFEHEINQFYTRVLGTPA 296 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + + T PG+ T+ + G KE + + P E+ +D+G F Sbjct: 297 RPEHIIGMRSEAQTAAPGEETVFTSRFWVGPKEQAALKAIQ-----PGLELTVDYGMLSF 351 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +AKP+F ++ + +N+VGN+G AI++ T+ +KL+F+ L++ Y S A M+ +QPK+ +L++ Sbjct: 352 LAKPLFWVLDWIHNVVGNWGWAIIILTILIKLVFYKLSETSYRSMAKMRAVQPKMMQLKD 411 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 ++ Q + +A+++LYK INPL GC PIL+QIPVF A+Y V+ S+EMR AP+ W Sbjct: 412 RYGDDK-QRMNQALMELYKKEKINPLGGCLPILVQIPVFIALYWVLLESVEMRQAPWILW 470 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I+DL+ DP I PI+M ++M Q K++P P D Q ++ Sbjct: 471 IQDLSVRDPYF-------------------ILPILMGVTMIAQYKLNPAPMDPIQQKLMM 511 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +P VF + FPAGL++YW +N++SI QQ I + Sbjct: 512 ALPFVFTVFFAFFPAGLVLYWFVNNLLSIAQQWYITR 548 >gi|261380787|ref|ZP_05985360.1| membrane protein insertase, YidC/Oxa1 family [Neisseria subflava NJ9703] gi|284796252|gb|EFC51599.1| membrane protein insertase, YidC/Oxa1 family [Neisseria subflava NJ9703] Length = 548 Score = 325 bits (833), Expect = 9e-87, Method: Composition-based stats. Identities = 139/575 (24%), Positives = 236/575 (41%), Gaps = 55/575 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A+SV I W++F+ P+ Q + A Sbjct: 1 MDF-KRLMAFFAISVAIFAGWEHFFPSPKP-----------NPAQQAAQQQTAATPAKVA 48 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AL+ + + + ++ I+ K L L Y + P V L + Y Sbjct: 49 AEAALTPASPITVTTDTVKAVIDEKSGDLRQLTLLQYKATGDEHKPFV--LFNDGKEYIY 106 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + + ++L N + ++ + YL Sbjct: 107 VAQSELLDAQGNNVLKGISFTAPQKQYSLKGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 166 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237 + +TN+ + S RI+R + + G + + + +SD+ Sbjct: 167 VNVRFDITNSKGQPVNLSADYRIVRDHSEPEGQGYFTRSYVGPVVYTPEGGFQKVSFSDL 226 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + Sbjct: 227 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKDGQSVCSAGECNIDIKRRNDNL 286 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A S I G T L+AG + I + + ++ D+G ++ A Sbjct: 287 YSASVSVPLAAIQAGAKAETAINLYAGPQTTSVIANIAD-----KLQLAKDYGKVHWFAS 341 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 342 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 401 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 402 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 460 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I P IM+ +MF Q ++PP D QA ++ MP Sbjct: 461 LSRPDPFY-------------------ILPFIMAATMFAQTYLNPPSTDPMQAKMMKVMP 501 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++F FPAGL++YW +N+++I QQ I + Sbjct: 502 LIFSIMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 536 >gi|260774544|ref|ZP_05883457.1| OxaI/YidC membrane insertion protein [Vibrio metschnikovii CIP 69.14] gi|260610450|gb|EEX35656.1| OxaI/YidC membrane insertion protein [Vibrio metschnikovii CIP 69.14] Length = 540 Score = 325 bits (833), Expect = 9e-87, Method: Composition-based stats. Identities = 142/570 (24%), Positives = 246/570 (43%), Gaps = 42/570 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + E+ T + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWQAAKNPAPQVIEQAQTSTTAPAPSFADEFDPAPEQH 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 RA A +++ + L SI+ G L Y +++S++P L + N + + Sbjct: 60 RAAAQTVTVTTD----VLTLSIDTVGGDIIHALLNQYADELNSSTPFTLLRNDPN--HLF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176 A+ + N V+++ +L ++ + I Sbjct: 114 IAQSGLIGPQGIDLSSNHRPVYHVDGDHFALADGEQELRIPMTYQANGIEYVKTFIVRRG 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y + V N S + + + + + G D + + Sbjct: 174 DYAVDVTFDVINRSGNNATLGMYAHLRQTLLDSGGSLAMPTYRGGAYSTEDTRYKKFSFK 233 Query: 236 DIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 D++ ++S W + Y+AS +IP E + + + + Sbjct: 234 DMQDRNLSLPLPNGQGWAAMIQHYFASAWIPRNEPGTNLYSRVIGNVGD---IGVRMPNK 290 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 TI G + T L+ G K + P ++++D+GW +FIAKP+ L+S+ Sbjct: 291 TIADGDATQFTATLWVGPKLQNDMAATA-----PNLDLVVDYGWLWFIAKPLHTLLSFIQ 345 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + VGN+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + Sbjct: 346 SFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQE 404 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 405 MMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-- 462 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I P++M SMF+ KMSP D Q I+ +MPV+F F Sbjct: 463 -----------------ILPLLMGASMFLIQKMSPNTITDPMQQKIMTFMPVMFTFFFLF 505 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+++++QQ +I + Sbjct: 506 FPSGLVLYWLVSNIVTLIQQTLIYRSLEKR 535 >gi|119475233|ref|ZP_01615586.1| putative inner membrane protein translocase component YidC [marine gamma proteobacterium HTCC2143] gi|119451436|gb|EAW32669.1| putative inner membrane protein translocase component YidC [marine gamma proteobacterium HTCC2143] Length = 569 Score = 325 bits (833), Expect = 1e-86, Method: Composition-based stats. Identities = 162/595 (27%), Positives = 259/595 (43%), Gaps = 61/595 (10%) Query: 1 MERNWNYFVA--IALSVIIVYAWQNFYVYPR----------------------IEEMNNE 36 M+ + ALS +++ W F EM N Sbjct: 1 MDFQRYLLIGSIAALSFMLLTEWVQFKEQNSGNNVVAAYQLQQGPVTGDNASRSSEMPNA 60 Query: 37 RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 + T N ++ + A + R+++K L IN G Sbjct: 61 QTPNGTQIDSNVDIPTFEQESSGNEIAASNTISRIKVKTDMLEIDINTLGGDIIFAAFPK 120 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 ++ + + TLL SN + Y A+ + + + +L+ + Sbjct: 121 HYAKLDTPEIPFTLLEQSN-RLTYIAQSGLIGVNGIDTAKGRARFTSAKTEYVLSDSEDE 179 Query: 157 K---LVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT- 211 LVF++ + + + YL + V NNS G++ R + Sbjct: 180 MAVDLVFQSNDPVSITKRFHFTRGEYLIGVEYIVKNNSEMPWSGGMFGQLKRDNSPDPSA 239 Query: 212 ----NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 G L D+ + + DIE++S + W+ I Y+ S ++P+ Sbjct: 240 DTSGMGLAPYLGAAINLPDEPYKKVSFDDIEENSFPKQNIEGGWVAIIQHYFTSAWVPNA 299 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + + + DG F++ +IT+ G + + L+ G K+ + Sbjct: 300 KQTHAYSMRKTKDGAN--IVGFTSPQITVAAGATGDVKSELYIGPKDQYRLEEIS----- 352 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P E+ +D+G ++IA+P+F L++ + +GN+G AI+ T+ VK FF L K Y S A Sbjct: 353 PGLELTVDYGILWWIAQPLFWLLTKLHGYLGNWGFAIIAVTILVKAAFFQLNAKAYTSMA 412 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 NM+ +QPK+ LRE++ Q + M+ LYK INPL GC PIL+Q+PVF A+Y V+ Sbjct: 413 NMRKVQPKLTALRERYADDK-QKQSQEMMALYKREKINPLGGCLPILVQMPVFMALYWVL 471 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+E+RHAPF G+IKDL+ DP I P+IM +SMFIQ + Sbjct: 472 MESVELRHAPFIGYIKDLSVMDPYF-------------------ILPLIMGVSMFIQQRF 512 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +PPP D QA I+ WMPV+F F FPAGL++YW +N +SI QQ +I K A Sbjct: 513 NPPPPDPMQAKIMQWMPVMFTFFFLFFPAGLVLYWVVNNTLSIAQQYLITKRIEA 567 >gi|124269009|ref|YP_001023013.1| protein translocase subunit yidC [Methylibium petroleiphilum PM1] gi|124261784|gb|ABM96778.1| protein translocase subunit yidC [Methylibium petroleiphilum PM1] Length = 553 Score = 325 bits (833), Expect = 1e-86, Method: Composition-based stats. Identities = 148/584 (25%), Positives = 241/584 (41%), Gaps = 54/584 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + ++ +V W + + M V ++VL Sbjct: 1 MTDMRRTLLWVVFTMSLVLLWDAWNKHTGQPSMFAPAPRPVAAASAPGVTPPASSVLPSA 60 Query: 61 RAQALSMSP--------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 A A + V + L +++ +G L Sbjct: 61 TAVAPAAGSGAPPALVAPPATAPTVTVSTDVLKLTLDSRGGDVVHAELLTQVDQNDRTRN 120 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF-----K 161 +V L + + Y A+ V +LPN T + L+ G+ L + Sbjct: 121 VV--LFDRSKERVYLAQTGLV---GAPDLPNHLTAYTLVPGETSLAAGKDALEVVFESPE 175 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEG 219 L + +Y ++ V N + +++R P ++ + G Sbjct: 176 QGGVKLRKTLTLQRGNYAVQVRHDVVNTGTAALSPQLYVQLVRDGNAPPGESSFYSTFTG 235 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + + + IEK + + N W+ + Y+ S ++ + + +F Sbjct: 236 PVVYTDASKFHKVDFKSIEKGNTEHDKTADNGWVAMVQHYFFSAWLHNDKAPR--EFYTR 293 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 Y I PG S + LF G +E + P E++ D+GW Sbjct: 294 KIDVNLYAVGQLFPLGEIAPGASKQFDSVLFVGPQEEKKLETLA-----PGLELVKDYGW 348 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F IAKP+F L+ + L+GN+G AI+ V +K F+ L K Y S A MK I PKI E Sbjct: 349 FTIIAKPLFWLLDQLHKLIGNWGWAIVALVVLLKAAFYWLNAKAYASMAKMKAINPKIME 408 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +RE+ K PQ +Q+ M+++YK +NPL GC PIL+Q+PVF A+Y V+ S+EMR+AP+ Sbjct: 409 MRERLKD-KPQQMQQEMMRIYKEEKVNPLGGCLPILVQMPVFIALYWVLLSSVEMRNAPW 467 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 GWI DL+ DP I PI+M+ + +Q ++P P D QA Sbjct: 468 LGWITDLSVRDPLF-------------------ILPIVMTGTTLLQTWLNPTPPDPMQAK 508 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ MP+VF FPAGL++YW +N++SI QQ VI + G Sbjct: 509 MMWIMPLVFSVMFFFFPAGLVLYWITNNLLSIAQQWVINRRLGV 552 >gi|312797629|ref|YP_004030551.1| 60 kDa inner membrane protein YIDC [Burkholderia rhizoxinica HKI 454] gi|312169404|emb|CBW76407.1| 60 kDa inner membrane protein YIDC [Burkholderia rhizoxinica HKI 454] Length = 554 Score = 325 bits (833), Expect = 1e-86, Method: Composition-based stats. Identities = 150/583 (25%), Positives = 244/583 (41%), Gaps = 48/583 (8%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQ-----TVKQP 46 M+ I +++ WQ F+ + + Sbjct: 1 MDIKRTVLWVIFFMSVVMLYDNWQRDHGRLSLFFPNTTPTQTAASATPGTTTPGTQLADL 60 Query: 47 NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 Q S +A Q + ++ K G I+ G L+L + P Sbjct: 61 PQTTESSSAPGTAPAMQPVVKGQQIHFKTDVYDGDISTVGGTLSRLSLVK---EGDGKQP 117 Query: 107 IVTL-LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 + + L + Y A + V S T I L Sbjct: 118 NLYITLFDQTANHTYLARTGLIGGDFPNHNDVFTVVPGPTSLTDGANTVSISLESPVKAG 177 Query: 166 ILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAV 223 + +T + Y+ + + N ++ + ++R T F G Sbjct: 178 VKVVKTYTFTRGSYVIGVDTKIENVGAAPVKPTVYMELVRDDTPVETPRFSHTFIGPAVY 237 Query: 224 LGDKSLVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + +SD++K N W+ + Y+AS +IP + F Sbjct: 238 TEQHKFQKMSFSDLDKGKQDYAPSADNGWVAMVQHYFASAWIPKEGAQRQ--FYADKFSQ 295 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 A Y+ +I PG+S+ LFAG +E + P E++ D+GW I Sbjct: 296 ALYRVGMKEPVQSIAPGQSVNVAARLFAGPQEERKLEKIA-----PGLELVKDYGWVTII 350 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ ++RE+ Sbjct: 351 AKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQQIRER 410 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 F +S PQ + A+++LYK+ +NP GC PI++QIPVF ++Y V+ S+EMR AP+ WI Sbjct: 411 F-KSDPQKMNAALMELYKSEKVNPFGGCLPIVIQIPVFISLYWVLLSSVEMRGAPWVLWI 469 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ DP I P++M++SMF+Q K++P P D QA ++ + Sbjct: 470 HDLSQQDPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMF 510 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 MP+ F FPAGL++Y+ +NV+SI QQ I +M G + Sbjct: 511 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGKDKK 553 >gi|222056914|ref|YP_002539276.1| YidC translocase/secretase [Geobacter sp. FRC-32] gi|254772789|sp|B9M7R9|OXAA_GEOSF RecName: Full=Inner membrane protein oxaA gi|221566203|gb|ACM22175.1| YidC translocase/secretase [Geobacter sp. FRC-32] Length = 530 Score = 325 bits (833), Expect = 1e-86, Method: Composition-based stats. Identities = 154/564 (27%), Positives = 259/564 (45%), Gaps = 36/564 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD-NSYAAVLID 59 ME +A+ LS++++YA+ + P + QP+ ++ +V Sbjct: 1 ME--KRVVIAVILSIVVLYAFSYMFPPPVANQKEKAGPVAAVQSQPSSAKLSAIDSVPAA 58 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 QA + + + I + KG L+ Y + + L + S+ Sbjct: 59 ATPQAGLAARNIVVDTDLFIAVFSTKGGGLQSFQLKHYKDKAGAVGRDIVLKNESDGDKL 118 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-Y 178 + S+ ++G T + I+ + ++ ++ S + Y Sbjct: 119 SLLSEGKSFGLEPSLVFQSSAKDTKLAG---TEKSSIEFTVTSQTGVILKKVYSFSGNGY 175 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 + + N ++ + + G + + GDK + Sbjct: 176 GINLHQELINTGSSRVEGAISLINYNRLVAETGDGRYEVYGPVTMAGDKVIT--DKVSDI 233 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 F + SW +DKY+ I K + ++ +SD + Q +++ +++ P Sbjct: 234 AKGPKQFDNNVSWSAFADKYFMDAVIAVKNSIASARVAKISDNY--VQTNVTSSPLSLNP 291 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G+S + LF G K+ + R E ID+GWF +AKP+ + +FY+ Sbjct: 292 GQSASMDYRLFYGPKDLDILKAQGS-----RLEEAIDFGWFSALAKPLLRSIKFFYSYTH 346 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI++ T+ +K+LFFPL K Y S M+ +QPK+ EL+EKFK + +A++ L Sbjct: 347 NYGLAIIIITIILKVLFFPLTHKSYKSMKEMQKLQPKMVELKEKFKNDRD-AMNRAVMDL 405 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YKTH +NP+ GC P+L+QIPVFFA+YK + S+E+RHAPF WI DL+A DP Sbjct: 406 YKTHKVNPMGGCLPMLVQIPVFFALYKALMFSIELRHAPFVLWITDLSAKDPYY------ 459 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 + PIIM ++MFIQ KM+P D QA ++ +PVVF F +FPAGL Sbjct: 460 -------------VTPIIMGVTMFIQQKMTPTNMDPIQAKMMLALPVVFTFMFLNFPAGL 506 Query: 539 IIYWSWSNVISIVQQAVIMKMHGA 562 ++YW +N+++I QQA I K A Sbjct: 507 VLYWLINNILTIAQQAYINKSLPA 530 >gi|326571816|gb|EGE21822.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis BC7] Length = 547 Score = 325 bits (833), Expect = 1e-86, Method: Composition-based stats. Identities = 126/569 (22%), Positives = 234/569 (41%), Gaps = 42/569 (7%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + + QV ++ Sbjct: 1 MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTHADVPTTQVVGDIPSLT 60 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A L+ + + + IN G L+ ++ S P V L Sbjct: 61 AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETNS 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174 Y A+ + + S + + L + + + Sbjct: 117 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 176 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230 Y + + NNS + ++ R + G+ G S Sbjct: 177 AGQYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 236 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 K N + W+ I Y+ S + PS + + + ++ Sbjct: 237 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGND---FYIGYN 293 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I + GK IT + L+AG K + + +D+G + I+K +F ++ Sbjct: 294 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAIL 348 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 349 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 407 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A DP Sbjct: 408 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDP 467 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I PI M ++MF+Q ++P P D QA ++ +P++FV Sbjct: 468 WF-------------------ILPIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 508 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + FPAGL++YW+ +N+ S+ Q ++ K Sbjct: 509 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 537 >gi|295678214|ref|YP_003606738.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Burkholderia sp. CCGE1002] gi|295438057|gb|ADG17227.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Burkholderia sp. CCGE1002] Length = 552 Score = 325 bits (833), Expect = 1e-86, Method: Composition-based stats. Identities = 145/575 (25%), Positives = 241/575 (41%), Gaps = 42/575 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51 M+ I ++ WQ F+ + T D Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSTTPTQTAGTAAPGTTTPGTQPADL 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A A S V+ G I+ +G L+L + +V L Sbjct: 61 PATNAAAPGNAPAAEQSQLVKFGTDVYTGEIDTRGGTLSRLSLIKQGDGKQPD--LVITL 118 Query: 112 SPSNTKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 + Y A + N+ ++ + + + Sbjct: 119 FDKTNSHTYLARTGLLGGDFPNHNDVFTLMPNQPTHLADGQNSFQMSFESPEKGGLRVIK 178 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKS 228 Y+ + V N + ++R T F G + Sbjct: 179 TYTFTRGSYVIGVETKVQNVGTAPVTPQVYMELVRDDQPVETPRFSHTFIGPAVYTNEHH 238 Query: 229 LVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + D++K+ ++ W+ + Y+AS +IP + F + Y+ Sbjct: 239 FQKMTFGDLDKNKQDFATSANDGWVAMVQHYFASAWIPQEG--VKRDFYAEKIDPSLYRV 296 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 TI PG++++ + LFAG +E + P +++ D+GW IAKP+F Sbjct: 297 GMKQAMPTIQPGQTVSVSARLFAGPEEEQMLAGIA-----PGLDLVKDYGWVTIIAKPLF 351 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+S ++ VGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK Sbjct: 352 WLLSKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG-D 410 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI+DL+ Sbjct: 411 PQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWIWWIQDLSQ 470 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I P++M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 471 QDPYF-------------------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAF 511 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 FPAGL++Y+ +NV+SI QQ I +M GA Sbjct: 512 SVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGA 546 >gi|326571729|gb|EGE21742.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis BC8] gi|326574357|gb|EGE24300.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis CO72] Length = 547 Score = 325 bits (833), Expect = 1e-86, Method: Composition-based stats. Identities = 126/569 (22%), Positives = 233/569 (40%), Gaps = 42/569 (7%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + + QV ++ Sbjct: 1 MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTHADVPTTQVVGDIPSLT 60 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A L+ + + + IN G L+ ++ S P V L Sbjct: 61 AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETDL 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174 Y A+ + + S + + L + + + Sbjct: 117 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 176 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230 Y + + NNS + ++ R + G+ G S Sbjct: 177 AGKYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 236 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 K N + W+ I Y+ S + PS + + ++ Sbjct: 237 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGKD---FYIGYN 293 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I + GK IT + L+AG K + + +D+G + I+K +F ++ Sbjct: 294 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAIL 348 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 349 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 407 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A DP Sbjct: 408 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDP 467 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I PI M ++MF+Q ++P P D QA ++ +P++FV Sbjct: 468 WF-------------------ILPIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 508 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + FPAGL++YW+ +N+ S+ Q ++ K Sbjct: 509 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 537 >gi|85060407|ref|YP_456109.1| putative inner membrane protein translocase component YidC [Sodalis glossinidius str. 'morsitans'] gi|84780927|dbj|BAE75704.1| putative preprotein translocase subunit [Sodalis glossinidius str. 'morsitans'] Length = 547 Score = 325 bits (833), Expect = 1e-86, Method: Composition-based stats. Identities = 130/572 (22%), Positives = 238/572 (41%), Gaps = 54/572 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + + + Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAWQTDHAPTPTAQTTQQTANTTAADPNSQGVP------ 53 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L IN +G + L Y + S P L ++ + Y Sbjct: 54 ---ASGQGQLITVKTDVLSLKINTRGGDIEQAFLLSYPDKLGSPQPFHLL--ETSPEFVY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + L + + +++ + L Sbjct: 109 QAQSGLTGKNGPDNPANGERPLFTTNQDTYVLADNQSELRVPLTYTTPDGVVYTKAFILK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227 + + + N S + + G++ + ++ G D Sbjct: 169 RGDFALNVNYDINNASAQPLELTLFGQLKQSIDLPKARNTDSSNFALHTYRGAAYSTTDD 228 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + DI+ ++S W+ + +Y+A+ ++P T + F G+ Sbjct: 229 KYQKYSFKDIKGENLS-VSTEGGWVAMLQQYFATAWVPF--TPGKNTFYTSDLGNGLAAV 285 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 F + +T+ G L+ G + + P ++ +D+GW +FI++P+F Sbjct: 286 GFKSAPVTVAAGGQSELKATLWLGPEIQDKMAAIA-----PHLDLAVDYGWLWFISQPLF 340 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Sbjct: 341 KLLKFIHSYIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERLGDDK 400 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI DL+A Sbjct: 401 -QRQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSIELRHAPFALWIHDLSA 459 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVV 526 DP I P++M ++MF KMSP D Q I+ +MPV+ Sbjct: 460 QDPYY-------------------ILPLLMGITMFFIQKMSPTTVTDLMQQKIMTFMPVI 500 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 501 FTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 532 >gi|326573504|gb|EGE23470.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis O35E] Length = 547 Score = 325 bits (833), Expect = 1e-86, Method: Composition-based stats. Identities = 126/569 (22%), Positives = 234/569 (41%), Gaps = 42/569 (7%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + + + QV ++ Sbjct: 1 MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTRADVPTTQVVGDIPSLT 60 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A L+ + + + IN G L+ ++ S P V L Sbjct: 61 AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETDL 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174 Y A+ + + S + + L + + + Sbjct: 117 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 176 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230 Y + + NNS + ++ R + G+ G S Sbjct: 177 AGQYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 236 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 K N + W+ I Y+ S + PS + + ++ Sbjct: 237 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGKD---FYIGYN 293 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I + GK IT + L+AG K + + +D+G + I+K +F ++ Sbjct: 294 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAIL 348 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 349 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 407 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A DP Sbjct: 408 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDP 467 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I PI M ++MF+Q ++P P D QA ++ +P++FV Sbjct: 468 WF-------------------ILPIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 508 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + FPAGL++YW+ +N+ S+ Q ++ K Sbjct: 509 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 537 >gi|326561739|gb|EGE12074.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis 7169] gi|326569040|gb|EGE19109.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis BC1] Length = 547 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 126/569 (22%), Positives = 233/569 (40%), Gaps = 42/569 (7%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + + QV ++ Sbjct: 1 MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTHADVPTTQVVGDIPSLT 60 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A L+ + + + IN G L+ ++ S P V L Sbjct: 61 AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETDL 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174 Y A+ + + S + + L + + + Sbjct: 117 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 176 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230 Y + + NNS + ++ R + G+ G S Sbjct: 177 AGKYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 236 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 K N + W+ I Y+ S + PS + + ++ Sbjct: 237 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGKD---FYIGYN 293 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I + GK IT + L+AG K + + +D+G + I+K +F ++ Sbjct: 294 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAIL 348 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 349 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 407 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A DP Sbjct: 408 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWIADLSAMDP 467 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I PI M ++MF+Q ++P P D QA ++ +P++FV Sbjct: 468 WF-------------------ILPIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 508 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + FPAGL++YW+ +N+ S+ Q ++ K Sbjct: 509 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 537 >gi|209519687|ref|ZP_03268476.1| 60 kDa inner membrane insertion protein [Burkholderia sp. H160] gi|209499904|gb|EDZ99970.1| 60 kDa inner membrane insertion protein [Burkholderia sp. H160] Length = 552 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 146/574 (25%), Positives = 244/574 (42%), Gaps = 42/574 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51 M+ I ++ WQ F+ + T D Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPNTTPTQTAGSAAPGTTTPGTQPADL 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + A A + S V+ G I+ +G L+L + +V L Sbjct: 61 PATSAAAPGNAPAAAQSQLVKFSTDVYSGEIDTRGGTVSRLSLVKQGDGKQPD--LVITL 118 Query: 112 SPSNTKNAYFAELDYVSTA--NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 + Y A + N+ ++ + + + Sbjct: 119 FDRTNNHTYLARTGLLGGDFPNHNDVFTLMPNQPTQLVDGQNSFQMSFESPEKGGLKVIK 178 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKS 228 Y+ + V N + ++R T F G + Sbjct: 179 TYTFTRGSYVIGVETKVQNVGTTAVTPQVYMELVRDDQPVETPRFSHTFIGPAVYTNEHH 238 Query: 229 LVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + +SD++K+ ++ W+ + Y+AS +IP + +F + Y+ Sbjct: 239 FQKMTFSDLDKNKQDFATSANDGWVAMVQHYFASAWIPQEG--VKREFYAEKIDPSLYRV 296 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 TI PG++++ + LFAG +E + P +++ D+GW IAKP+F Sbjct: 297 GMKQALPTIQPGQTVSVSARLFAGPEEEKMLAGIA-----PGLDLVKDYGWVTIIAKPLF 351 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+S + LVGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK Sbjct: 352 WLLSKIHGLVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG-D 410 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI+DL+ Sbjct: 411 PQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIQDLSQ 470 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I PI+M++SMF+Q +++P P D QA ++ +MP+ F Sbjct: 471 QDPYF-------------------ILPILMAVSMFLQTRLNPTPPDPVQAKMMMFMPIAF 511 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 512 SVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|170694073|ref|ZP_02885229.1| 60 kDa inner membrane insertion protein [Burkholderia graminis C4D1M] gi|170141145|gb|EDT09317.1| 60 kDa inner membrane insertion protein [Burkholderia graminis C4D1M] Length = 552 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 147/575 (25%), Positives = 239/575 (41%), Gaps = 44/575 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51 M+ I ++ WQ F+ + T D Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTAGSAAPGTTTPGTQPADL 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + S V+ G I+ +G L+L + +V L Sbjct: 61 PATNAAAPANTPAATQSQLVKFSTDVYSGEIDTRGGTLSKLSLVKQGDGKQPD--LVITL 118 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILF 168 + Y A + + + T+ ++ L F+ + Sbjct: 119 FDRAGNHTYLARTGLLG-GDFPNHNDIYTLMPNQQTELKGDQKSFSLSFESPVKGGLKVI 177 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDK 227 + Y+ + + N + S ++R T F G Sbjct: 178 KTYTFTRGSYVIGVDTKIQNVGTAPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYTEQN 237 Query: 228 SLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + + DI+K+ + N W+ + Y+AS +IP + A Y+ Sbjct: 238 HFQKMTFGDIDKNKEDYAKQADNGWIAMVQHYFASAWIPQQG--VKRDIYVEKIDPALYR 295 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 I PG+++ + LFAG +E + P E++ D+GW IAKP+ Sbjct: 296 VGVKQPVAAIAPGQTVDVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPL 350 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ ++ VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK Sbjct: 351 FWLLEKIHSYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKG- 409 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ Sbjct: 410 DPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWVLWIHDLS 469 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP I P++M++SMF+Q K++P P D QA ++ +MP+ Sbjct: 470 QQDPYF-------------------ILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIA 510 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F FPAGL++Y+ +NV+SI QQ I +M G Sbjct: 511 FSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMG 545 >gi|37678187|ref|NP_932796.1| putative inner membrane protein translocase component YidC [Vibrio vulnificus YJ016] gi|61214266|sp|Q7MQK5|OXAA_VIBVY RecName: Full=Inner membrane protein oxaA gi|37196926|dbj|BAC92767.1| inner membrane protein, 60 kDa [Vibrio vulnificus YJ016] Length = 539 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 131/549 (23%), Positives = 230/549 (41%), Gaps = 42/549 (7%) Query: 22 QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGS 81 Q + V E+ + + + + + + L S Sbjct: 21 QQWQVAKNPAPQAVEQAQTSSTLPAPSFADELDPAPAQQ-----ASAKLITVTTDVLTLS 75 Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV 141 I+ G +L Y +++S + L + + A+ V N+ Sbjct: 76 IDTVGGDVVAADLNQYSAELNSANAFELLRDTQG--HQFIAQSGLVGPQGIDLSSNNRPS 133 Query: 142 WNLISGKILTPTTPIKLV----FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFS 197 + + + +L ++ + I Y + V N S + Sbjct: 134 YQVSADSFTLADDQNELRIPMTYQANGLEYTKTFILKRGSYAIDVEFDVINKSGNNATLG 193 Query: 198 PRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGIS 255 + ++ + T G D + + D++ ++S W + Sbjct: 194 MYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYSFEDMQDRNLSLTLTNGQGWAAMI 253 Query: 256 DKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315 Y+A+ +IP E + + + + T+ G S T L+AG K Sbjct: 254 QHYFAAAWIPRNEPGANLYTRVIGNMGD---IGVRMPNKTVADGDSAHFTATLWAGPKLQ 310 Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 + P ++++D+GW +FIAKP+ L+S + VGN+G+AI+ T V+ Sbjct: 311 DQMAEVA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQSFVGNWGVAIICLTFIVRGAM 365 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 +PL K QY S A M+ +QPK+ +RE+ Q + + M++LYK +NPL GC P++L Sbjct: 366 YPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPLIL 424 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+P+F A+Y + S+E+RH+PF WI DL+A DP I P+ Sbjct: 425 QMPIFIALYWALMESVELRHSPFILWIHDLSAQDPYF-------------------ILPL 465 Query: 496 IMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 +M SMF+ KMSP D Q I+ +MPV+F F FP+GL++YW SN+++++QQ+ Sbjct: 466 LMGGSMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQS 525 Query: 555 VIMKMHGAE 563 +I K + Sbjct: 526 LIYKALEKK 534 >gi|78357437|ref|YP_388886.1| protein translocase subunit yidC [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552065|sp|Q30YQ5|OXAA_DESDG RecName: Full=Inner membrane protein oxaA gi|78219842|gb|ABB39191.1| protein translocase subunit yidC [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 536 Score = 325 bits (832), Expect = 2e-86, Method: Composition-based stats. Identities = 136/571 (23%), Positives = 241/571 (42%), Gaps = 49/571 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYV----YPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 N +A+ LS+ ++ W P + +Q A Sbjct: 1 MENKRPIIAVVLSLFVLIGWSYLSEFMGWTPAPAPVEQNATAVQQKASEPVAQPVQTASA 60 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + A + V++ P +G L+ Y + +P+V L++P Sbjct: 61 PAASSFAPTEGREVKVDTPLYTAVFQSQGGVLKHFRLKKYTESIEEGAPLVELVTPEAAG 120 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 A L + + K+ + + + FERT+S D Sbjct: 121 KAPMGLLL----NGQPTWKLAAWQFEGDDLKLDGSGKGELVFVGEMDGVRFERTLSFDPE 176 Query: 178 YL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 +T+ + + + + ++ +D Sbjct: 177 TYLISEKVRLTDTAGVSRDVRLGMTLSTTSLSPEGGAYNLTRMA---WYQDGFHQETSAD 233 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + + E +W G+ Y+ +V P++ FK + +G + ++I Sbjct: 234 DLRETGVKVDEGVNWGGVMCNYFMAVMAPAEGA---LPFKGVLEGGVYRSV-VENSSLSI 289 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G S + G KE + + +++GWF F+AKP+ + +FY+ Sbjct: 290 ASGSSAEFGIGYYIGPKESDRLAAMPY-----HLDEALNYGWFTFLAKPLVSGLKFFYSY 344 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 GN+G+AI++ T+ VKLLF+PL++K Y S MK +QP + +++EK+ Q + + ++ Sbjct: 345 AGNYGVAIIILTILVKLLFWPLSQKSYKSMEQMKKLQPMVQKIKEKYGD-DRQRMNQEVM 403 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIKDLAAA 468 +LYKT+ +NP GC P+LLQIPVF +Y+ + ++E+RHAPF W+ DL+A Sbjct: 404 ELYKTYKVNPAGGCLPMLLQIPVFLGLYQGLLNAIELRHAPFIAHLPFTDIVWLADLSAK 463 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P++M +M +Q +++P PAD QA I+ +MPVVF Sbjct: 464 DPFY-------------------ITPVVMGATMLLQQRLTPAPADPTQAKIMMFMPVVFT 504 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 F +FPAGL++YW +NV+SI QQ +++ Sbjct: 505 FMFLNFPAGLVVYWLVNNVLSIGQQWWMLRK 535 >gi|256823857|ref|YP_003147820.1| 60 kDa inner membrane insertion protein [Kangiella koreensis DSM 16069] gi|256797396|gb|ACV28052.1| 60 kDa inner membrane insertion protein [Kangiella koreensis DSM 16069] Length = 536 Score = 325 bits (831), Expect = 2e-86, Method: Composition-based stats. Identities = 140/569 (24%), Positives = 243/569 (42%), Gaps = 53/569 (9%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME +F+ + ++ AWQ Y ++ NE+ + ++ Sbjct: 1 MESMRGFFILGFAICTFLLYQAWQKDYGPQSQQQEVNEQFGQKDAVVDSE---------- 50 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT-K 117 + S +E+ I+ G L Y+ ++ S V L + Sbjct: 51 ------IKSSNLIEVVTDVFKVKIDRVGGDVVYAELNDYNRELDSEKEKVVLFDYRDRLY 104 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-E 176 A A L + N + N I L + N + + F +T + Sbjct: 105 QAKSALLGNGAPDNQLPRATYQVKQNAYQLADGKNELEIPLTWVNEDGVEFTKTFKFKRD 164 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y + V N S + ++ ++R + T + S E+KY Sbjct: 165 DYEIGVEYKVKNQSSNDRTYNFVAELIRDQKPTGLEEKSSFGMSPFIGVAYSPEERKYEK 224 Query: 237 IEKSSI----SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + + N W+G Y+ S +IP ++ S+ +F Sbjct: 225 MSVEDLVEEPINVTRQGGWIGYLQHYFISAWIPEQQEQIKVTTTVKSNQDTV--IRFIQP 282 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 +++ L+ G K + + A P E +D W ++I P++ LM + Sbjct: 283 TVSVPAQSESVINATLYVGPKILKRL-----EAAAPGLEKSLDLSWVWWIGLPLYKLMQF 337 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F++ VGN+G+AI+L T+ VK L +PL+ QY S ANM+ + PK+ +L+E++ Q +Q Sbjct: 338 FFSFVGNWGLAIILVTLVVKALLYPLSAAQYRSMANMRKLAPKMQQLKERY-GEDKQRMQ 396 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+++YK NP GC P++LQ P+F A+Y V+ ++E+RHAPF WI+DL+ ADP Sbjct: 397 QEMMKMYKDEGANPFGGCLPMILQFPIFIALYYVLFEAVELRHAPFVAWIQDLSVADPYF 456 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFA 530 + P++M SM++ K+ P P D Q I++++P+VF Sbjct: 457 -------------------VLPLLMGGSMWLMQKLQPQSPTMDPMQQKIMSYLPIVFTVF 497 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + FPAGL++YW +N+IS+ QQ I K Sbjct: 498 MLFFPAGLVLYWLCNNLISVAQQQYITKK 526 >gi|322515695|ref|ZP_08068668.1| YidC/Oxa1 family membrane protein insertase [Actinobacillus ureae ATCC 25976] gi|322118240|gb|EFX90532.1| YidC/Oxa1 family membrane protein insertase [Actinobacillus ureae ATCC 25976] Length = 542 Score = 325 bits (831), Expect = 2e-86, Method: Composition-based stats. Identities = 134/547 (24%), Positives = 246/547 (44%), Gaps = 32/547 (5%) Query: 18 VYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPS 77 WQ + + +++ + + S A +I A+ + + +++ Sbjct: 20 FTQWQQDFNPEIQAQKQAQQQAQVASQSSDVPAASNANTVI---AENATQGKTITIQSDV 76 Query: 78 LIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPN 137 L +I+ G +L ++ +++S +P L + + T A + N P Sbjct: 77 LRLTIDTLGGDVIASDLLAHNAELNSETPFKLLQTGATTYVAQSGLVGKNGIDTNTGRPQ 136 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFS 197 + + F+ + + + Y + V N S I Sbjct: 137 YQVAQEAFVLADGQNKISVPMTFEKDGVLYTKTFVLKRGSYDVAVNFNVKNQSAQAIEVQ 196 Query: 198 PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257 P G++ +++ + A ++ ++ D N W+ + Sbjct: 197 PYGQLKHTLVESSGSLTMPTYTGGAYSSSETNYKKYSFDEMAKENLNIGTKAGWVAVLQH 256 Query: 258 YWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317 Y+ S ++P+++ + + + + P T T+ L+ G K+ Sbjct: 257 YFVSAWVPNQDAQNSLYSRTNNG---IATIGYRGPVTEVAPNSEATITSQLWTGPKDQKE 313 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + ++ +D+GW +FIAKP+F L+++ ++V N+G+AI+ T+ VK++ +P Sbjct: 314 MEATAAT-----LDLTVDYGWAWFIAKPLFALLTFIQSIVTNWGLAIIGVTLVVKMILYP 368 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 L K QY S A M+ +QPKI E+RE+F Q + + M++LYK +NP+ GC PIL+Q+ Sbjct: 369 LTKAQYTSMAKMRMLQPKIQEMRERFGD-DRQRMSQEMMKLYKDEKVNPMGGCLPILIQM 427 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 P+F A+Y ++E+RHAPF+GWI+DL+A DP I P++M Sbjct: 428 PIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY-------------------ILPLLM 468 Query: 498 SLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 SMF+ KMSP P AD Q ++ +MPV+F FP+GL++YW SN+I+I QQ +I Sbjct: 469 GGSMFLLQKMSPTPVADPVQKKVMTFMPVLFTVFFLWFPSGLVLYWLTSNLITIAQQWLI 528 Query: 557 MKMHGAE 563 + + Sbjct: 529 YRNLEKK 535 >gi|307825357|ref|ZP_07655576.1| membrane protein insertase, YidC/Oxa1 family domain containing [Methylobacter tundripaludum SV96] gi|307733532|gb|EFO04390.1| membrane protein insertase, YidC/Oxa1 family domain containing [Methylobacter tundripaludum SV96] Length = 585 Score = 325 bits (831), Expect = 2e-86, Method: Composition-based stats. Identities = 151/592 (25%), Positives = 253/592 (42%), Gaps = 63/592 (10%) Query: 2 ERNWNYFVAIALSVIIVY---AWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 N + + + ++++ AWQ Y E T + + A Sbjct: 16 MDNIRFILIVTFAMLVFMLQQAWQLDYGPKPEVAAITEPVATNTKEDLPSATGASAQTET 75 Query: 59 DDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV----------- 101 + A S + + +K L I+LKG +L+L Y ++ Sbjct: 76 AEPNTAAVPLATMSSANIITVKTDVLALQIDLKGGTIQNLDLLTYPIEKSNTVVDKLRAM 135 Query: 102 ------SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----T 151 N+ V L + S + + A+ ++ + P+ +TV+ Sbjct: 136 IGLSVAEKNTAPVRLFNSSQ-EKLFVAQSGLIADSGFATAPSHHTVFKNEQTNYDLQPGQ 194 Query: 152 PTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210 + + L + + N + + + Y + V N+S ++++ T+ Sbjct: 195 DSLTVPLTWTDNNGLTITKLFTFKRGSYDITLEQKVKNDSAKPWSGRQYSQLLKAPDTTS 254 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYS----DIEKSSISNFHESNSWLGISDKYWASVFIPS 266 G ++KY D + W + Y+AS +IP Sbjct: 255 KGGMLTGGMRAYDGGVIYTEKEKYQKISFDDMSDENLDVATKGGWTALIQHYFASAWIPP 314 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + H K L+DGH Y + +T+ LFAG K P + Sbjct: 315 ADQENHFYTKVLNDGH--YVIGTYSAPVTVNANSDAQFVAQLFAGPKIQPMMEKIA---- 368 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P E+ +D+ + FI KP++ L++ ++ GN+G+AI+ T+ +KLLFFPL++ Y S Sbjct: 369 -PGLELTVDYSFLTFIGKPIYWLLNQIHDAAGNWGVAIIGVTLCIKLLFFPLSQSSYKSM 427 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ IQP++ EL+E+F P M+ LYK +NPL GC PIL+QIPVF +Y V Sbjct: 428 AKMRKIQPRLKELQERFADDRP-RFNTEMMALYKKEKVNPLGGCLPILVQIPVFMCLYWV 486 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 +S ++E RHAPF WI+DL++ DP + P+IM ++M IQ Sbjct: 487 LSETVEFRHAPFILWIQDLSSQDPFY-------------------VLPVIMGITMKIQQS 527 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++P P D QA ++ P+VF FPAGL++YW +N +SI+QQ+ I K Sbjct: 528 LNPAPIDPIQAKVMKMFPIVFTIFFLFFPAGLVLYWVVNNTLSIIQQSYITK 579 >gi|27364440|ref|NP_759968.1| membrane protein insertase [Vibrio vulnificus CMCP6] gi|38503001|sp|Q8DDI2|OXAA_VIBVU RecName: Full=Inner membrane protein oxaA gi|27360559|gb|AAO09495.1| OxaI/YidC membrane insertion protein [Vibrio vulnificus CMCP6] Length = 539 Score = 325 bits (831), Expect = 2e-86, Method: Composition-based stats. Identities = 132/549 (24%), Positives = 230/549 (41%), Gaps = 42/549 (7%) Query: 22 QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGS 81 Q + V E+ + + + + + + L S Sbjct: 21 QQWQVAKNPAPQAVEQAQTSSTLPAPSFADELDPAPAQQ-----ASAKLITVTTDVLTLS 75 Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV 141 I+ G +L Y +++S + L + + A+ V N+ Sbjct: 76 IDTVGGDVVAADLNQYSAELNSANAFELLRDTQG--HQFIAQSGLVGPQGIDLSSNNRPS 133 Query: 142 WNLISGKILTPTTPIKLV----FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFS 197 + + + +L ++ + I Y + V N S + Sbjct: 134 YQVSADSFTLADDQNELRIPMTYQANGLEYTKTFILKRGSYAIDVEFDVINKSGNNATLG 193 Query: 198 PRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGIS 255 + ++ + T G D + + D++ ++S W + Sbjct: 194 MYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYSFEDMQDRNLSLTLTNGQGWAAMI 253 Query: 256 DKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315 Y+A+ +IP E + + + + TI G S T L+AG K Sbjct: 254 QHYFAAAWIPRNEPGANLYTRVIGNMGD---IGVRMPNKTIADGDSAHFTATLWAGPKLQ 310 Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 + P ++++D+GW +FIAKP+ L+S + VGN+G+AI+ T V+ Sbjct: 311 DQMAEVA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQSFVGNWGVAIICLTFIVRGAM 365 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 +PL K QY S A M+ +QPK+ +RE+ Q + + M++LYK +NPL GC P++L Sbjct: 366 YPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPLIL 424 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+P+F A+Y + S+E+RH+PF WI DL+A DP I P+ Sbjct: 425 QMPIFIALYWALMESVELRHSPFILWIHDLSAQDPYF-------------------ILPL 465 Query: 496 IMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 +M SMF+ KMSP D Q I+ +MPV+F F FP+GL++YW SN+++++QQ+ Sbjct: 466 LMGGSMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQS 525 Query: 555 VIMKMHGAE 563 +I K + Sbjct: 526 LIYKALEKK 534 >gi|225025482|ref|ZP_03714674.1| hypothetical protein EIKCOROL_02382 [Eikenella corrodens ATCC 23834] gi|224941766|gb|EEG22975.1| hypothetical protein EIKCOROL_02382 [Eikenella corrodens ATCC 23834] Length = 543 Score = 325 bits (831), Expect = 2e-86, Method: Composition-based stats. Identities = 142/578 (24%), Positives = 255/578 (44%), Gaps = 61/578 (10%) Query: 1 MERN---WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME N V ++++ + W F P+ E + Q D Sbjct: 1 MESNNELKRTAVFAIIAILTLMVWNYFNPQPQQPEQAAVQTEQQAAAPVAGSD------- 53 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 L + + + +L I+ L+L ++ + S TLLS +N + Sbjct: 54 -------LPPTKPITVSTDTLKAVIDENSGDLRGLDLLKHNSAGDA-SKTFTLLSDNN-E 104 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DE 176 + Y + + N L +S+ S + T ++L N + ++ + Sbjct: 105 HKYLVQSLLIDQKGNYLLQDSSFKAPQNSYTLNGDTLEVRLSAPETNGVQVDKVYTFRKG 164 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKY 234 YL + + N++ ++ R++R + + Q +A D + + + Sbjct: 165 SYLIDVRFDIANHTDAPLKLDGVYRVLRDSSTPEGSGYFNQTYVGPVAYTPDGNFQKVPF 224 Query: 235 SDIEKSSISNFHE-------SNSWLGISDKYWASVFIPSKE------TSFHSQFKYLSDG 281 D++ S ++ W+G + Y+ +V++ + + + Sbjct: 225 KDLDDDFESKRDRADYQRTATSGWVGFTQHYFTTVWVLQPKDGNSICQNGNCLLDIKRRS 284 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 Y A I G+ ++ L+AG +E+ I R E++ D+G + Sbjct: 285 DNLYSAGVRVPLPAIAAGQKLSVPAELYAGPQEYAVISKVAD-----RLELVKDYGRTHV 339 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +A P+F L+++ ++L+GN+G +I+L T+ VK L PL Y S A M+ + PK++ L+ Sbjct: 340 VAAPLFGLLNWLHSLIGNWGWSIVLLTIIVKTLLLPLTNASYRSMAKMRAVAPKLEMLK- 398 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K LQ+AM+++YK INPL GC P+LLQ PVF +Y V+ S+E+R A + GW Sbjct: 399 KQHGDDRMALQQAMMKMYKDEKINPLGGCLPMLLQFPVFIGLYWVLLASVELRQASW-GW 457 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + DLA DP I PI+M+L+M+IQ K+SPPP+D QA ++ Sbjct: 458 VADLARPDPLY-------------------ILPILMALTMYIQTKLSPPPSDPMQAKMMK 498 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 MP+ F FPAGL++Y+ +N++S+ QQ +I + Sbjct: 499 IMPLAFSVMFFFFPAGLVLYYVVNNLLSMGQQWLINRK 536 >gi|260553776|ref|ZP_05826046.1| preprotein translocase subunit YidC [Acinetobacter sp. RUH2624] gi|260405080|gb|EEW98580.1| preprotein translocase subunit YidC [Acinetobacter sp. RUH2624] Length = 586 Score = 325 bits (831), Expect = 2e-86, Method: Composition-based stats. Identities = 136/588 (23%), Positives = 242/588 (41%), Gaps = 67/588 (11%) Query: 11 IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 + +++ AWQ Y E++ + N +T + V + A Sbjct: 14 FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEISADLPNAKTATVASDVPQANIAQSQT 73 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A A + ++ IN KG + L + SN P V L + + Sbjct: 74 TDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQPFVMLENDAK--RT 131 Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164 Y A+ + ++ G+ + + Sbjct: 132 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQKGQSEKVLSVPMVFKTPEG 191 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + Y + V N S + G++ R + + F + Sbjct: 192 VEIIKTFTFTQGQYPIVVSHQVINRSQQNWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 251 Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271 G + K+++ + ++ W+ I Y+ S +IP + + Sbjct: 252 GGAWGTPDSHYNKLKFANFSEEKLNA-DAKGGWVAIVQHYFVSAWIPGNLKLTQANGQPY 310 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++ + F++ I + G S+ L++G K + Sbjct: 311 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 365 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 425 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++ ++E+F + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+ Sbjct: 426 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+RHAP+ GWI+DL+A DP I P+IM +MF Q ++P P Sbjct: 485 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 525 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 AD QA + MP++F + FPAGL++YW +N I+I+QQ I K Sbjct: 526 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINKS 573 >gi|326560696|gb|EGE11064.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis 46P47B1] Length = 557 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 126/569 (22%), Positives = 233/569 (40%), Gaps = 42/569 (7%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + + QV ++ Sbjct: 11 MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTHADVPTTQVVGDIPSLT 70 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A L+ + + + IN G L+ ++ S P V L Sbjct: 71 AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETDL 126 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174 Y A+ + + S + + L + + + Sbjct: 127 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 186 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230 Y + + NNS + ++ R + G+ G S Sbjct: 187 AGKYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 246 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 K N + W+ I Y+ S + PS + + ++ Sbjct: 247 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGKD---FYIGYN 303 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I + GK IT + L+AG K + + +D+G + I+K +F ++ Sbjct: 304 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAIL 358 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 359 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 417 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A DP Sbjct: 418 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDP 477 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I PI M ++MF+Q ++P P D QA ++ +P++FV Sbjct: 478 WF-------------------ILPIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 518 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + FPAGL++YW+ +N+ S+ Q ++ K Sbjct: 519 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 547 >gi|59802471|ref|YP_209183.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae FA 1090] gi|240015755|ref|ZP_04722295.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae FA6140] gi|240112100|ref|ZP_04726590.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae MS11] gi|240114846|ref|ZP_04728908.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae PID18] gi|240124874|ref|ZP_04737760.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae SK-92-679] gi|254492908|ref|ZP_05106079.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae 1291] gi|268598157|ref|ZP_06132324.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae MS11] gi|268600501|ref|ZP_06134668.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID18] gi|268683454|ref|ZP_06150316.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae SK-92-679] gi|293397800|ref|ZP_06642006.1| inner membrane protein oxaA [Neisseria gonorrhoeae F62] gi|75507262|sp|Q5F4W6|OXAA_NEIG1 RecName: Full=Inner membrane protein oxaA gi|59719366|gb|AAW90771.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|226511948|gb|EEH61293.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae 1291] gi|268582288|gb|EEZ46964.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae MS11] gi|268584632|gb|EEZ49308.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID18] gi|268623738|gb|EEZ56138.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae SK-92-679] gi|291611746|gb|EFF40815.1| inner membrane protein oxaA [Neisseria gonorrhoeae F62] Length = 545 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 139/575 (24%), Positives = 237/575 (41%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQKQAATASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y N P V L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFV--LFGDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + T ++L N + ++ + + YL Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKDSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + + N S S RI+R + + + + + + +SD+ Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + + Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRSDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A S I G T L+AG + I + + ++ D+G ++ A Sbjct: 284 YSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|300313620|ref|YP_003777712.1| inner-membrane transmembrane protein [Herbaspirillum seropedicae SmR1] gi|300076405|gb|ADJ65804.1| inner-membrane transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 542 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 161/549 (29%), Positives = 251/549 (45%), Gaps = 34/549 (6%) Query: 22 QNFYVYPRIEEMNNERKNI------QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 F+ + P + AV D A + + + Sbjct: 8 SMFFPSANPTQEQAAANPAAPTASPTGSPVPQAGTPAPGAVPGADVAATATKGETIVITT 67 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 + SI+ G + L L V +V L S + Y AE + Sbjct: 68 DLVKASIDTVGGELKRLELLKQPDVVDPTKNVV--LFDSEPGHMYLAESGLI----GGPF 121 Query: 136 PNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSID 192 PN T++ +G LV L + + YL + TVTN + Sbjct: 122 PNHKTIFTAQAGPRTLDNGNEIQLVLVADQGGVKLTKTYTFKRDSYLIDVKHTVTNTTGA 181 Query: 193 QIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SN 249 I S +++R P ++ + G + + + I + ++ N Sbjct: 182 AINPSLYLQLVRDGNKPGGESHFYSTFTGPAVYSNSEHFEKLDFEKIANGKQQHVNKTDN 241 Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 W+ + Y+ S FIP + K + G Y T+ P S+T + L+ Sbjct: 242 GWIAMVQHYFVSAFIPPQNAQRDVFSKKV--GDNLYAVGSILPLGTVAPNASVTMDSQLY 299 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 +G T+ P +++ D+G IA+P+F LM++ +N+VGN+G I+L TV Sbjct: 300 SGPTVSKTLQAIA-----PGLDLVRDYGHLTVIAEPIFWLMTHIHNIVGNWGWTIILLTV 354 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +KL+FFPL+ Y S A MK + PK+ +RE+ K PQ + + M+ LYKT INPL G Sbjct: 355 LIKLIFFPLSAASYRSMAKMKAVSPKMQAIRERHKG-DPQAMNREMMTLYKTEKINPLGG 413 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C PI +QIPVF A+Y V+ S+EMR AP+ GW+ DL A D LFG +P++ M Sbjct: 414 CLPIAIQIPVFIALYSVLLASVEMRGAPWLGWVHDLTAPD-----RLFGTIPYFN---MP 465 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 +G+ PIIM+ SMF+Q K++P P D QA ++ +MP+VF F FP+GL++YW +N++S Sbjct: 466 IGLLPIIMAASMFLQTKLNPTPPDPVQAKVMMFMPLVFSFMFFFFPSGLVLYWVTNNILS 525 Query: 550 IVQQAVIMK 558 I QQ VI + Sbjct: 526 IAQQWVITR 534 >gi|326575524|gb|EGE25449.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis 101P30B1] Length = 547 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 127/569 (22%), Positives = 233/569 (40%), Gaps = 42/569 (7%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + + QV ++ Sbjct: 1 MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTHADVPTTQVVGDIPSLT 60 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A L+ + + + IN G L+ ++ S P V L Sbjct: 61 AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETNS 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174 Y A+ + + S + + L + + + Sbjct: 117 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 176 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230 Y + + NNS + ++ R + G+ G S Sbjct: 177 AGQYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 236 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 K N + W+ I Y+ S + PS + + ++ Sbjct: 237 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGKD---FYIGYN 293 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I + GK IT + L+AG K + + +D+G + I+K +F ++ Sbjct: 294 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAVL 348 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 349 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 407 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y V+ S+E+RHAP+ GWI DL+A DP Sbjct: 408 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWVLVESVELRHAPWIGWITDLSAMDP 467 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I PI M ++MF+Q ++P P D QA ++ +P++FV Sbjct: 468 WF-------------------ILPIFMGMTMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 508 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + FPAGL++YW+ +N+ S+ Q ++ K Sbjct: 509 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 537 >gi|296114113|ref|YP_003628051.1| protein translocase insertase subunit YidC [Moraxella catarrhalis RH4] gi|295921807|gb|ADG62158.1| protein translocase insertase subunit YidC [Moraxella catarrhalis RH4] Length = 556 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 126/569 (22%), Positives = 234/569 (41%), Gaps = 42/569 (7%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + + QV ++ Sbjct: 10 MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTHADVPTTQVVGDIPSLT 69 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A L+ + + + IN G L+ ++ S P V L Sbjct: 70 AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETNS 125 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174 Y A+ + + S + + L + + + Sbjct: 126 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 185 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230 Y + + NNS + ++ R + G+ G S Sbjct: 186 AGQYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 245 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 K N + W+ I Y+ S + PS + + + ++ Sbjct: 246 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGND---FYIGYN 302 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I + GK IT + L+AG K + + +D+G + I+K +F ++ Sbjct: 303 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAIL 357 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 358 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 416 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A DP Sbjct: 417 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDP 476 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I PI M ++MF+Q ++P P D QA ++ +P++FV Sbjct: 477 WF-------------------ILPIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 517 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + FPAGL++YW+ +N+ S+ Q ++ K Sbjct: 518 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 546 >gi|325123490|gb|ADY83013.1| putative inner membrane protein translocase component [Acinetobacter calcoaceticus PHEA-2] Length = 574 Score = 324 bits (830), Expect = 3e-86, Method: Composition-based stats. Identities = 134/588 (22%), Positives = 241/588 (40%), Gaps = 67/588 (11%) Query: 11 IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 + +++ AWQ Y E++ + N + + V + A Sbjct: 2 FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKNATVASDVPQANIAQSQT 61 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A A + ++ IN KG + L + S+ P V L + + Sbjct: 62 TDATAPVNQQLISVQTDLYHIWINPKGGDIVRIELLSHDKSKDSDQPFVMLENDAK--RT 119 Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164 Y A+ + ++ G+ + Sbjct: 120 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQKGQSEKVLNVPMVFKTPEG 179 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + Y + V N S + G++ R + + F + Sbjct: 180 VEIIKTFTFTQGQYPIVVKHQVINRSQQSWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 239 Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271 G + K+++ + ++ W+ I Y+ S +IP + + Sbjct: 240 GGAWGTPDAHYNKLKFANFSEEKVN-TEAKGGWVAIVQHYFVSAWIPGNLKLTQANGQPY 298 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++ + F++ I + G S+ L++G K + Sbjct: 299 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 353 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ Sbjct: 354 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 413 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++ ++E+F + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+ Sbjct: 414 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 472 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+RHAP+ GWI+DL+A DP I P+IM +MF Q ++P P Sbjct: 473 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 513 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 AD QA + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 514 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINKS 561 >gi|240122686|ref|ZP_04735642.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae PID332] gi|240127387|ref|ZP_04740048.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae SK-93-1035] gi|260441339|ref|ZP_05795155.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae DGI2] gi|268681283|ref|ZP_06148145.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID332] gi|268685760|ref|ZP_06152622.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae SK-93-1035] gi|291044698|ref|ZP_06570407.1| inner membrane protein oxaA [Neisseria gonorrhoeae DGI2] gi|268621567|gb|EEZ53967.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID332] gi|268626044|gb|EEZ58444.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae SK-93-1035] gi|291011592|gb|EFE03588.1| inner membrane protein oxaA [Neisseria gonorrhoeae DGI2] Length = 545 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 139/575 (24%), Positives = 237/575 (41%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQKQAATASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y N P V L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFV--LFGDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + T ++L N + ++ + + YL Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKDSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + + N S S RI+R + + + + + + +SD+ Sbjct: 164 VNVRFDIANGSAQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + + Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRSDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A S I G T L+AG + I + + ++ D+G ++ A Sbjct: 284 YSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|239998129|ref|ZP_04718053.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae 35/02] gi|268593980|ref|ZP_06128147.1| inner membrane protein oxaA [Neisseria gonorrhoeae 35/02] gi|268547369|gb|EEZ42787.1| inner membrane protein oxaA [Neisseria gonorrhoeae 35/02] Length = 545 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 139/575 (24%), Positives = 236/575 (41%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQKQAATASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y N P V L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFV--LFGDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + T ++L N + ++ + + YL Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKDSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + + N S S RI+R + + + + + + +SD+ Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYAGPVVYTPEGNFQKVSFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCHIDIKRRSDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A S I G T L+AG + I + + ++ D+G ++ A Sbjct: 284 YSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|320157824|ref|YP_004190203.1| inner membrane protein translocase component YidC, long form [Vibrio vulnificus MO6-24/O] gi|319933136|gb|ADV88000.1| inner membrane protein translocase component YidC, long form [Vibrio vulnificus MO6-24/O] Length = 539 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 132/549 (24%), Positives = 232/549 (42%), Gaps = 42/549 (7%) Query: 22 QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGS 81 Q + V E+ + + + + + + L S Sbjct: 21 QQWQVAKNPAPQAVEQAQTSSTLPAPSFADELDPAPAQQ-----ASAKLITVTTDVLTLS 75 Query: 82 INLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV 141 I+ G +L Y +++S + L + + A+ V N+ Sbjct: 76 IDTVGGDVVAADLNQYSAELNSANAFELLRDTQG--HQFIAQSGLVGPQGIDLSSNNRPS 133 Query: 142 WNLISGKILTPTTPIKLV----FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFS 197 + + + +L ++ + I Y + V N S + Sbjct: 134 YQVSADSFTLADDQNELRIPMTYQANGLEYTKTFILKRGSYAIDVEFDVINKSGNNATLG 193 Query: 198 PRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGIS 255 + ++ + T G D + + D++ ++S + W + Sbjct: 194 MYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYSFEDMQDRNLSLTLANGQGWAAMI 253 Query: 256 DKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF 315 Y+A+ +IP E + + + + TI G S T L+AG K Sbjct: 254 QHYFAAAWIPRNEPGANLYTRVIGNMGD---IGVRMPNKTIADGDSAHFTATLWAGPKLQ 310 Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 + P ++++D+GW +FIAKP+ L+S ++VGN+G+AI+ T V+ Sbjct: 311 DQMAEVA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQSVVGNWGVAIICLTFIVRGAM 365 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 +PL K QY S A M+ +QPK+ +RE+ Q + + M++LYK +NPL GC P++L Sbjct: 366 YPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPLIL 424 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+P+F A+Y + S+E+RH+PF WI DL+A DP I P+ Sbjct: 425 QMPIFIALYWALMESVELRHSPFILWIHDLSAQDPYF-------------------ILPL 465 Query: 496 IMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 +M SMF+ KMSP D Q I+ +MPV+F F FP+GL++YW SN+++++QQ+ Sbjct: 466 LMGGSMFLIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQS 525 Query: 555 VIMKMHGAE 563 +I K + Sbjct: 526 LIYKALEKK 534 >gi|194100143|ref|YP_002003283.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae NCCP11945] gi|240013310|ref|ZP_04720223.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae DGI18] gi|240117048|ref|ZP_04731110.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae PID1] gi|240120382|ref|ZP_04733344.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae PID24-1] gi|268602734|ref|ZP_06136901.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID1] gi|254773007|sp|B4RJJ2|OXAA_NEIG2 RecName: Full=Inner membrane protein oxaA gi|193935433|gb|ACF31257.1| Inner membrane protein oxaA [Neisseria gonorrhoeae NCCP11945] gi|268586865|gb|EEZ51541.1| preprotein translocase YidC subunit [Neisseria gonorrhoeae PID1] Length = 545 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 139/575 (24%), Positives = 236/575 (41%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQKQAATASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y N P V L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFV--LFGDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + T ++L N + ++ + + YL Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKDSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + + N S S RI+R + + + + + + +SD+ Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCHIDIKRRSDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A S I G T L+AG + I + + ++ D+G ++ A Sbjct: 284 YSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|119947213|ref|YP_944893.1| 60 kDa inner membrane insertion protein [Psychromonas ingrahamii 37] gi|166977402|sp|A1T0M9|OXAA_PSYIN RecName: Full=Inner membrane protein oxaA gi|119865817|gb|ABM05294.1| protein translocase subunit yidC [Psychromonas ingrahamii 37] Length = 566 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 148/561 (26%), Positives = 237/561 (42%), Gaps = 47/561 (8%) Query: 21 WQNFYVYPRIEEMNNERKNIQTVKQ-------------PNQVDNSYAAVLIDDRAQALSM 67 + + + + + V NS D + L Sbjct: 20 YTAWVEEKTPQVAPQVQTEQVDSSVPASVASSANSANLSDGVPNSPQQSSTDATSTELPA 79 Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 S V + N L +I+L G +L + + S++P L S Y A+ + Sbjct: 80 SQSVTIANDELRLTISLVGGDIIKADLLQHDATLDSDTPYRLL--DSGNGFTYIAQSGLI 137 Query: 128 STANNIELPNSNTVWNLISGKILTPTT---PIKLVFKNANNILFERTISLDEHYLF-KIV 183 + + +L L F +A+ +F +T +L + Sbjct: 138 GQGPDANKNGRPLYDTTDTESVLADGQAEVSTMLHFVDADGNIFIKTFTLKRGEYVTNVA 197 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 + N + + ++ + + A ++ E+ + Sbjct: 198 YQIENKTDSPLNVQLYAQLRETLSDDSGSMVMPVYRGGAFSTTETRYEKYSFSDMQDGPL 257 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 W+ + Y+ S +IPS + D A F A TI P Sbjct: 258 QKTTEGGWVAMLQHYFVSAWIPSPTDQNVLYSNIIQDKEAA--IGFKAPSKTIAPQSVAE 315 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 L+ G K + K+ ++ +D+GW +FIA+P+F L+ +F +VGN+G+A Sbjct: 316 LETNLWVGPKIQEEMALVAKN-----LDLTVDYGWLWFIAQPLFKLLLFFQGIVGNWGVA 370 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T VK +PL K QY S A M+ +QPKI ELRE+F Q + KAM++LYK Sbjct: 371 IILITFTVKGALYPLTKAQYTSMAKMRLLQPKIKELREQF-GEDRQKVSKAMMELYKKEK 429 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC+PILLQ+P+F A+Y + S+E+RHAPF WI+DL+ DP Sbjct: 430 VNPLGGCFPILLQMPIFIALYWSLMESVELRHAPFMLWIQDLSVQDPYY----------- 478 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M +SMF KMSP D Q ++ +MPV+F F FPAGL++YW Sbjct: 479 --------ILPILMGVSMFFIQKMSPTTVQDPMQQKVMQFMPVIFTFFFLWFPAGLVLYW 530 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 SNV++++QQ +I + + Sbjct: 531 LMSNVVTLIQQTLIYRSFEKK 551 >gi|197120418|ref|YP_002140845.1| preprotein translocase subunit YidC [Geobacter bemidjiensis Bem] gi|254772787|sp|B5EGX9|OXAA_GEOBB RecName: Full=Inner membrane protein oxaA gi|197089778|gb|ACH41049.1| preprotein translocase subunit YidC [Geobacter bemidjiensis Bem] Length = 537 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 146/568 (25%), Positives = 246/568 (43%), Gaps = 45/568 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN--------NERKNIQTVKQPNQVDNS 52 ME +A+ LS+ ++YA+ + P+ + + Sbjct: 1 ME--KRLIIAVLLSIGVLYAYSFIFPTPKPLTAPGAKQAAMSSASAPALPAAVAPTAGTA 58 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A QA +++ V + + +G L+ Y V + L++ Sbjct: 59 PLAAPAPQAGQAPAVAKDVTVDTDLYTAVFSTQGGGLKKFVLKKYKETVGPQGKDIVLVN 118 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 N Y D + + S + ++ + I F + Sbjct: 119 -ETAANRYALLSDSREFGLSPDALYSAS--TGEVKVTNGGKGSLEFTTTTSQGITFRKVY 175 Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRG-RIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 + + Y + + V N + + + R + V G + Sbjct: 176 TFSGDAYRIGLTEEVQNAGNVALTGAVHLLQTSRVVEAKKEGRYEVHAPSTLSEGKVKVD 235 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + D + + + +W +DKY+ I K + SQ + + Q Sbjct: 236 KL---DNLLKNPVQYGKDIAWSAFADKYFMDGIIADKGS--ISQVRITRPANDAIQRDIV 290 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + +T+ PG+ ++ G K+ + R + +ID+GWF IAKP+ + Sbjct: 291 SPTVTVAPGQRSAVNYAVYYGPKDLDILKLQGN-----RLDEVIDYGWFGPIAKPLVHSL 345 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + Y GN+GIAI++ T +KL+FFPL K Y S +M+ +QPK+ EL+EKFK Sbjct: 346 KFLYKYTGNYGIAIIIITFILKLVFFPLTHKSYKSMKDMQKLQPKMTELKEKFKNDRD-A 404 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + +A+++LYKTH +NPL GC P+++QIPVFF +Y+ + S+E+RHAPF+ WI DL+A DP Sbjct: 405 MNRAVMELYKTHKVNPLGGCLPMVVQIPVFFGLYRALMYSIELRHAPFYLWITDLSAKDP 464 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 + PIIM ++MFIQ KM+P D QA ++ +P+VF F Sbjct: 465 YY-------------------VTPIIMGVTMFIQQKMTPTNMDPVQAKMMLMLPIVFTFM 505 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +FP+GL+IYW +NV++I QQ I K Sbjct: 506 FLNFPSGLVIYWLVNNVLTIAQQMYINK 533 >gi|229520178|ref|ZP_04409605.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TM 11079-80] gi|229342772|gb|EEO07763.1| OxaI/YidC membrane insertion protein [Vibrio cholerae TM 11079-80] Length = 482 Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats. Identities = 133/506 (26%), Positives = 226/506 (44%), Gaps = 37/506 (7%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + + + + L SI+ G L Y +++S V L + + + A+ Sbjct: 2 AAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQFIAQS 59 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDEHYLF 180 V N+ + + + +L ++ + I Y Sbjct: 60 GLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELHIPMTYQANGIDYTKTFILKRGSYAV 119 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEK 239 +V V NNS + + ++ + N G D + + D++ Sbjct: 120 DVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFDDMKD 179 Query: 240 SSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 ++S + +W+ + Y+AS +IP E + +++ TI Sbjct: 180 RNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNKTIAN 236 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G L+ G K + P ++++D+GW +FIAKP+ L+S + VG Sbjct: 237 GDKAEFEATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQSFVG 291 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + M++L Sbjct: 292 NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQEMMEL 350 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 351 YKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY------ 404 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 I P++M SMF+ KMSP D Q I+ +MPV+F F FP+G Sbjct: 405 -------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSG 451 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563 L++YW SN+++++QQ +I K + Sbjct: 452 LVLYWLVSNIVTLIQQTLIYKALEKK 477 >gi|254226943|ref|ZP_04920509.1| inner membrane protein, 60 kDa [Vibrio cholerae V51] gi|125620548|gb|EAZ48916.1| inner membrane protein, 60 kDa [Vibrio cholerae V51] Length = 482 Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats. Identities = 134/506 (26%), Positives = 226/506 (44%), Gaps = 37/506 (7%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + + + + L SI+ G L Y +++S V L + + + A+ Sbjct: 2 AAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG--HQFIAQS 59 Query: 125 DYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEHYLF 180 V N+ + + + I + ++ + I Y Sbjct: 60 GLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGIDYTKTFILKRGSYAV 119 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEK 239 +V V NNS + + ++ + N G D + + D++ Sbjct: 120 DVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFDDMKD 179 Query: 240 SSIS-NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 ++S + +W+ + Y+AS +IP E + +++ TI Sbjct: 180 RNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLGD---MGIRTPNKTIAN 236 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G L+ G K + P ++++D+GW +FIAKP+ L+S N VG Sbjct: 237 GDKAEFEATLWVGPKLQDQMAATA-----PNLDLVVDYGWLWFIAKPLHWLLSVIQNFVG 291 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Q + + M++L Sbjct: 292 NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQEMMEL 350 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NPL GC PILLQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP Sbjct: 351 YKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY------ 404 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 I P++M SMF+ KMSP D Q I+ +MPV+F F FP+G Sbjct: 405 -------------ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSG 451 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563 L++YW SN+++++QQ +I K + Sbjct: 452 LVLYWLVSNIVTLIQQTLIYKALEKK 477 >gi|148266439|ref|YP_001233145.1| 60 kDa inner membrane insertion protein [Geobacter uraniireducens Rf4] gi|189036352|sp|A5G9V4|OXAA_GEOUR RecName: Full=Inner membrane protein oxaA gi|146399939|gb|ABQ28572.1| protein translocase subunit yidC [Geobacter uraniireducens Rf4] Length = 528 Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats. Identities = 149/564 (26%), Positives = 261/564 (46%), Gaps = 40/564 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME +A+ LS+ ++YA+ + P+ +++ Q+ P Q +S + + Sbjct: 1 ME--KRVVIAVILSIAVLYAYSMIFPPPQKKDVVKPGPVPQSQTAPVQAVSSTSVLPAIM 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +S+ V ++ + +GA L L+ Y V L++ + Sbjct: 59 QQGNVSVRDLV-VETDLFTAVFSTRGAGLKKLVLKRYKETSGPGGREVVLVNEEAAEK-- 115 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI--LFERTISLDEH- 177 ++ + + + ++ +G L L F + + +F+++ + Sbjct: 116 ---FSLLTEGKSFGIEPTVVYNSISNGLKLAGNEKGTLEFTSTSPTGIVFKKSYIFTGND 172 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + NNS + S + G + + DK E+ Sbjct: 173 YRIDLHQELLNNSPTKFDGSLHLIGNNRIEAKPGDGRFEVYGPVTLADDKINTEK--VAD 230 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + ++ W +DKY+ + + + + ++ + Q S+ + + Sbjct: 231 FSKGPKQYDKNILWTAFADKYFMNAILSDNNSIAAVRLAKVNTNY--LQDDVSSPPLALN 288 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PG+S +F G K+ + R E ID+GWF +AKP+ + +FY+ Sbjct: 289 PGQSAAVNYRIFYGPKDLEILKGQGS-----RLEEAIDFGWFSALAKPLLRTLKFFYSYT 343 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+GIAI++ TV +KLLFFPL K Y S M+ +QPK+ EL+EKFK + +A++ Sbjct: 344 HNYGIAIIIITVILKLLFFPLTHKSYKSMKEMQKLQPKMAELKEKFKNDRD-AMNRAVMD 402 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYKTH +NP+ GC P+++QIPVFFA+YK + S+E+RHAPF WI DL+A DP Sbjct: 403 LYKTHKVNPMGGCLPMIVQIPVFFALYKALMFSIELRHAPFMLWIMDLSAKDPYY----- 457 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 + P+IM ++MF+Q KM+P D QA ++ +PVVF F +FP+G Sbjct: 458 --------------VTPVIMGVTMFVQQKMTPSNMDPVQAKMMLALPVVFTFMFLNFPSG 503 Query: 538 LIIYWSWSNVISIVQQAVIMKMHG 561 L++YW +N+++I QQ I K Sbjct: 504 LVLYWLVNNILTIAQQTYINKSLP 527 >gi|46579490|ref|YP_010298.1| inner membrane protein, 60 kDa [Desulfovibrio vulgaris str. Hildenborough] gi|120602960|ref|YP_967360.1| 60 kDa inner membrane insertion protein [Desulfovibrio vulgaris DP4] gi|81699125|sp|Q72D53|OXAA_DESVH RecName: Full=Inner membrane protein oxaA gi|259515685|sp|A1VER7|OXAA_DESVV RecName: Full=Inner membrane protein oxaA gi|46448904|gb|AAS95557.1| inner membrane protein, 60 kDa [Desulfovibrio vulgaris str. Hildenborough] gi|120563189|gb|ABM28933.1| protein translocase subunit yidC [Desulfovibrio vulgaris DP4] gi|311233305|gb|ADP86159.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio vulgaris RCH1] Length = 534 Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats. Identities = 142/571 (24%), Positives = 233/571 (40%), Gaps = 51/571 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 N +A+ LS I++ W Y+ + + + V S + Sbjct: 1 MENKRAIIAVVLSFIVLVGWGYLSEYMGWTPKSVPATEQKTAASAPAPSVVTSAPEAVTP 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A + S V + P ++ G L YH+ + ++ V L+ S + A Sbjct: 61 APAFSPSTGHEVTVTTPLYKAVLHSGGGVLRQFMLSRYHMGIDRDAAPVNLIESSAIRVA 120 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGK-ILTPTTPIKLVF--KNANNILFERTISLDE 176 L N + + W G L L F + + Sbjct: 121 PLGLLV------NGQPSWNTGQWAFEGGDLNLADGQTGTLRFVGSVDGLRVVRELEFHAD 174 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 YL + + + + + +A D S E+ S Sbjct: 175 SYLVTEKLHLAPEGDAPRTARVGFTLGTTSLTPGESQYNL--TRVAWFADGSFSEKS-ST 231 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + S W G+ Y+ + P Y+ + + Sbjct: 232 GDLEKGVLIDGSIDWAGVMSNYFLAAVAPKD----TRAVLKGKLEGGVYRVAVERPDQMV 287 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG S + G KE ++ + ID GWF FIA+P+ L+ +FY Sbjct: 288 NPGNSDVIVCNYWFGPKERDLLNAAPNN-----LGKAIDLGWFGFIARPLVTLLDFFYKY 342 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+G AI+L T+ +KL+F+PL+ K Y S MK +QP + ++REK ++ + M+ Sbjct: 343 VGNYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQPMLAKVREKHADDREKM-NEEMM 401 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIKDLAAA 468 +LYKT+ +NP GC P+L+QIPVFF +Y+ + ++E+RHAPF W+ DL+A Sbjct: 402 RLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHAPFIAHVPFTDIVWLADLSAK 461 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + P++M +MF+Q K++PP D QA ++ +MPVVF Sbjct: 462 DPFY-------------------VTPLVMGATMFLQQKLTPPAGDPTQAKVMMFMPVVFT 502 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 F +FP+GL++YW +NV+SI QQ I++ Sbjct: 503 FLFLNFPSGLVVYWLCNNVLSIAQQWWILRK 533 >gi|326562320|gb|EGE12646.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis 103P14B1] Length = 557 Score = 323 bits (827), Expect = 5e-86, Method: Composition-based stats. Identities = 127/569 (22%), Positives = 233/569 (40%), Gaps = 42/569 (7%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + + QV ++ Sbjct: 11 MQKILRILIIIAMLITAYLLILAWRDDYARKPVVTQPVATQTTHADVPTTQVVGDIPSLT 70 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A L+ + + + IN G L+ ++ S P V L Sbjct: 71 AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETNS 126 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174 Y A+ + + S + + L + + + Sbjct: 127 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 186 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230 Y + + NNS + ++ R + G+ G S Sbjct: 187 AGQYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 246 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 K N + W+ I Y+ S + PS + + ++ Sbjct: 247 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGKD---FYIGYN 303 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I + GK IT + L+AG K + + +D+G + I+K +F ++ Sbjct: 304 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQTVDYGLLWPISKVLFAVL 358 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 359 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 417 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y V+ S+E+RHAP+ GWI DL+A DP Sbjct: 418 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWVLVESVELRHAPWIGWITDLSAMDP 477 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I PI M ++MF+Q ++P P D QA ++ +P++FV Sbjct: 478 WF-------------------ILPIFMGMTMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 518 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + FPAGL++YW+ +N+ S+ Q ++ K Sbjct: 519 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 547 >gi|293611389|ref|ZP_06693685.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826261|gb|EFF84630.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 586 Score = 323 bits (827), Expect = 6e-86, Method: Composition-based stats. Identities = 134/588 (22%), Positives = 241/588 (40%), Gaps = 67/588 (11%) Query: 11 IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 + +++ AWQ Y E++ + N + + V + A Sbjct: 14 FVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKNATVASDVPQANIAQSQT 73 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 A A + ++ IN KG + L + S+ P V L + + Sbjct: 74 TDATAPVNQQLISVQTDLYHIWINPKGGDIVRIELLSHDKSKDSDQPFVMLENDAK--RT 131 Query: 120 YFAELDYVSTANNIELPNSNTVW---------------NLISGKILTPTTPIKLVFKNAN 164 Y A+ + ++ G+ + Sbjct: 132 YVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQKGQSEKVLNVPMVFKTPEG 191 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + Y + V N S + G++ R + + F + Sbjct: 192 VEIIKTFTFTQGQYPIVVKHQVINRSQQSWQGQMFGQLKRDNSEDPGKSSQGIFTLGTFL 251 Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271 G + K+++ + ++ W+ I Y+ S +IP + + Sbjct: 252 GGAWGTPDAHYNKLKFANFSEEKVN-TEAKGGWVAIVQHYFVSAWIPGNLKLTQANGQPY 310 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++ + F++ I + G S+ L++G K + Sbjct: 311 VAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDLAV-----GLN 365 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +PL+ K Y S A M+ Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSMAKMRV 425 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++ ++E+F + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+ Sbjct: 426 IAPEMQRMKEEF-GEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+RHAP+ GWI+DL+A DP I P+IM +MF Q ++P P Sbjct: 485 ELRHAPWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQP 525 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 AD QA + MP++F + FPAGL++YW +N I+I+QQ+ I K Sbjct: 526 ADPMQAKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQSFINKS 573 >gi|326563097|gb|EGE13370.1| putative inner membrane protein translocase component YidC [Moraxella catarrhalis 12P80B1] Length = 557 Score = 323 bits (827), Expect = 6e-86, Method: Composition-based stats. Identities = 126/569 (22%), Positives = 233/569 (40%), Gaps = 42/569 (7%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + +++ AW++ Y + + QV ++ Sbjct: 11 MQKILRILIIIAMLITAYLLILAWRDDYARKPVVMQPVATQTTHADVPTTQVVGDIPSLT 70 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A L+ + + + IN G L+ ++ S P V L Sbjct: 71 AGSVAD-LADTDLITVSTDRYEIKINPVGGDIVYAALKQHNATKDSTEPFVLL---ETDL 126 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174 Y A+ + + S + + L + + + Sbjct: 127 RTYVAQSGLIGRDGIDTAEGRAVYHSPRSSYVLNPSAGSLQVPLTYHKDGLTITKTYTFN 186 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKSLV 230 Y + + NNS + ++ R + G+ G S Sbjct: 187 AGKYPINLSYNINNNSNQPWQGQMYAQLKRDSSKDPGLEDKGMLGMSTYLGGAWGVPSDP 246 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 K N + W+ I Y+ S + PS + + ++ Sbjct: 247 YNKLKFSNFDDNINISSKDGWVAIVQHYFVSAWTPSNSFEADFFARTTGKD---FYIGYN 303 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + I + GK IT + L+AG K + + +D+G + I+K +F ++ Sbjct: 304 SPVINVASGKQITLNSTLYAGPKVQSEMASVAE-----GLNQAVDYGLLWPISKVLFAIL 358 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++GN+G +I++ T+ +K+ F L+ K Y+S A M+ I PK+ L++K Sbjct: 359 DNINKVIGNWGWSIIVLTLIIKVALFWLSNKSYMSMAKMRAIAPKLQALKDKHGD-DRMA 417 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + + M+QLY+ +NP+AGC PIL+Q+P+F +Y ++ S+E+RHAP+ GWI DL+A DP Sbjct: 418 MSQEMMQLYRDEKVNPMAGCLPILIQMPIFLGLYWMLVESVELRHAPWIGWITDLSAMDP 477 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA 530 I PI M ++MF+Q ++P P D QA ++ +P++FV Sbjct: 478 WF-------------------ILPIFMGITMFVQQMLNPQPTDPMQAKMMKILPMIFVVF 518 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + FPAGL++YW+ +N+ S+ Q ++ K Sbjct: 519 MLWFPAGLVLYWTVNNLFSMTHQHLVNKR 547 >gi|319778792|ref|YP_004129705.1| Inner membrane protein translocase component YidC, long form [Taylorella equigenitalis MCE9] gi|317108816|gb|ADU91562.1| Inner membrane protein translocase component YidC, long form [Taylorella equigenitalis MCE9] Length = 549 Score = 323 bits (826), Expect = 6e-86, Method: Composition-based stats. Identities = 155/566 (27%), Positives = 250/566 (44%), Gaps = 34/566 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQ-PNQVDNSYAAVLI 58 + + + W N+ Y P E+ P+ NS A I Sbjct: 1 MEFKRTLLWMIFVFSLFTLWSNWKSYNNPAPLNTVTEQNQSPATPSVPSADTNSPATAPI 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + S ++ +K+ L + + GAQ +L +H P TLL Sbjct: 61 KTNSVVSEDSEKITVKSDVLNLTFDTVGAQLIKADLLKHHSAEDKALPT-TLLDFKKDIF 119 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 + + + + + + + I ++ + Y Sbjct: 120 TVQSGVLSQTPNKQFPIQTTQFKYVSTDENLSGDKKDIIFEAESDGIKVRRTYTLNKGSY 179 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 D ++N S + I +I R P+ +T+ G+ + + + D Sbjct: 180 DITFKDEISNLSSEAISPIHYVQITRDGAKPKDSTSMTNSYWGYAVYSEKEKFEKVPFKD 239 Query: 237 IEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 I+ S S+ W+ Y+ + ++ K H +F+ G Y A S Sbjct: 240 IDDRSAEYVSKTSDGWISFIQHYFVTAWVLEKGKEHHIEFR--KAGQNLYAASASQVLGA 297 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I P +++T ++ L+ G ++ + P ++++GW FIAKPMF LMS+ Sbjct: 298 IAPQQTVTVSSHLWVGPQDQKALVKLH-----PNLNTVVNYGWLTFIAKPMFALMSWINT 352 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 L+GN+G I++ TV +KLL +PL+ Y S A MKNI P++ L+E++ Q L AM Sbjct: 353 LIGNWGWTIVVLTVIIKLLLYPLSATSYKSMARMKNISPRMKLLKEQYGDDK-QKLNAAM 411 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +QLYKT INPL GC PILLQIP+F +Y+VI S+E+R A + GWI DL+A DP Sbjct: 412 MQLYKTEKINPLGGCLPILLQIPIFLTLYRVILSSVELRGASWIGWITDLSAQDPYY--- 468 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 I P +M L+MF+QM+M+P P D QA I+ MP+VF + FP Sbjct: 469 ----------------ILPTLMILTMFLQMRMNPTPPDPTQAKIMMIMPLVFGAMMFFFP 512 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHG 561 AGL++YW+ ++++SI+QQ K Sbjct: 513 AGLVLYWTVNSLLSILQQWYNTKRFT 538 >gi|332286192|ref|YP_004418103.1| putative inner membrane protein translocase component YidC [Pusillimonas sp. T7-7] gi|330430145|gb|AEC21479.1| putative inner membrane protein translocase component YidC [Pusillimonas sp. T7-7] Length = 565 Score = 322 bits (825), Expect = 8e-86, Method: Composition-based stats. Identities = 149/531 (28%), Positives = 250/531 (47%), Gaps = 34/531 (6%) Query: 39 NIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 P + V D + + S +V + + + GAQ L Y Sbjct: 59 PNAAPSTPAATPSGNETVPSDSTPEQAAASQKVNVTTDVYDLTFDTVGAQLVKAELVKYT 118 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI--LTPTTPI 156 S + P+V L +++ + Y A+ + N P T + L+S + T I Sbjct: 119 APGSKDQPMVLL--DNSSTSTYLAQTGVIGAPNGQSYPTHLTPFKLVSSETSLTGDTLDI 176 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTF 214 + + + Y + + N + I S +++R P +++ + Sbjct: 177 VFEAQADGVKVVKTYTLHKGRYDIDVKHDIYNLGTEPITPSLYLQLVRDGNDPSDSSSFY 236 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHS 273 G + + +SDI+K S + N W+G+ Y+AS +IP++ T H+ Sbjct: 237 STFTGPALYSAGEKFQKITFSDIDKGKASYTQQADNGWIGMVQHYFASAWIPAQGTVRHN 296 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + LS+ Y + + I PG++++ L+ G ++ + P E++ Sbjct: 297 ETLRLSNN--LYAIRSIESAGAIQPGQNVSVEANLWVGPQDQKAMGELA-----PGLELV 349 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+GW IAKP+F +M++ + L+GN+G I+ T +KL+F+PL+ Y S A MK + Sbjct: 350 VDYGWLTIIAKPLFKIMTWLHALLGNWGWTIVALTFLIKLVFYPLSAASYRSMAKMKQVT 409 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ LREKF + L AM+++Y+T INPL GC P+++QIPVF ++Y V+ S+EM Sbjct: 410 PRLQALREKFGDDKAK-LNAAMMEMYRTEKINPLGGCLPMVVQIPVFISLYWVLLGSVEM 468 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R AP+ WI+DL+ DP I P M +MF+Q+K++P P D Sbjct: 469 RGAPWILWIQDLSVRDPWF-------------------ILPAFMMATMFLQIKLNPTPPD 509 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 QA I+ MP+VF + FPAGL++YW +N +SI QQ IM E Sbjct: 510 PTQAKIMMIMPLVFGGMMFFFPAGLVLYWCVNNAVSIAQQRYIMHKLDKET 560 >gi|109900610|ref|YP_663865.1| 60 kDa inner membrane insertion protein [Pseudoalteromonas atlantica T6c] gi|123360110|sp|Q15MS7|OXAA_PSEA6 RecName: Full=Inner membrane protein oxaA gi|109702891|gb|ABG42811.1| protein translocase subunit yidC [Pseudoalteromonas atlantica T6c] Length = 543 Score = 322 bits (825), Expect = 8e-86, Method: Composition-based stats. Identities = 139/568 (24%), Positives = 249/568 (43%), Gaps = 35/568 (6%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME ++ + I L S ++ WQ Y + + +++ N Sbjct: 1 MESQRSFLL-IGLAMVSFLLWQQWQVDYGPQPAQPVESQQTTGSDAPNSNGDVPIATPTN 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + +L SIN G NL Y L+ S +LL PS Sbjct: 60 KSALPTQSVVGKVISVTTDTLQLSINTVGGDVISANLLKYPLEQGS-QGTYSLLRPSGPT 118 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DE 176 + A+ V T + + S + + + L + + +L + Sbjct: 119 -IFVAQSGLVGTNGIDKGSRPTYSVSQDSFVMEGDSLTVPLTYTAKSGLLVTKEFIFSKN 177 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + K+ V N S D G++ + + F A + E+ D Sbjct: 178 SHEVKVNYHVENTSSDVKSVKQFGQLKQSTADQGGSMFMPTYRGGAFSTEDERYEKYSFD 237 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + N W + + Y+ S ++P ++ + K +G+A F + I Sbjct: 238 DMQDKNLNQVTPAGWTAMIEHYFVSAWVPPQDQTNSLYSKMTQNGNA--IIGFIGQSVDI 295 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG+S+ + L+ G K+ T+ + ++ +D+G+ ++I+K +F + + ++L Sbjct: 296 EPGQSVDIQSSLYLGPKDQDTLEKIAR-----GLDLTVDYGFLWWISKYLFAFLQFIHSL 350 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GN+G +I+L T+ VK +PL K QY S A M+ ++PK+D L+E++ Q +Q+AM+ Sbjct: 351 IGNWGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDK-QKMQQAMM 409 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 ++YK +NP+ GC+P+LLQ+P+F A+Y V+ S+E+RHA F WI DL+ DP Sbjct: 410 EMYKKDKVNPMGGCFPLLLQMPIFLALYWVLLESVELRHANFIFWITDLSVKDPYF---- 465 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFP 535 + PI+ LSM++ K+ P D Q I+ +MPV FP Sbjct: 466 ---------------VLPILTGLSMYLLQKLQPMTMTDPMQQKIMQFMPVAMSLFFFIFP 510 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 AGL++YW SN+I+++Q +I Sbjct: 511 AGLVLYWLISNIITLIQAKIIYASMEKR 538 >gi|241665033|ref|YP_002983393.1| inner membrane protein translocase component YidC [Ralstonia pickettii 12D] gi|240867060|gb|ACS64721.1| 60 kDa inner membrane insertion protein [Ralstonia pickettii 12D] Length = 554 Score = 322 bits (825), Expect = 9e-86, Method: Composition-based stats. Identities = 145/579 (25%), Positives = 246/579 (42%), Gaps = 52/579 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM----------------NNERKNIQTVK 44 M+ + + S+ +V + N+ + M + ++ Sbjct: 1 MDI-KRTILWVIFSLAVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGSTPAGDVPKSA 59 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 S AA +QA + S ++ + L +I+ GA L L + Sbjct: 60 SATAAAGSQAAPATGAASQAPA-SEKIVISTDLLRATIDTDGAIVTKLELLDQK---DHD 115 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 + L + + Y A + + T I L Sbjct: 116 GNPMVLF-DRSVERTYLARSGLIG-GDFPNHTTVFTASAGPRDLGTGNDVSITLTADKGG 173 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAV 223 L + + Y+ VTN+ I + + R + + G Sbjct: 174 AKLAKTYVFKRGSYVIDTRFDVTNDGTAPINPTLYMELARDGGAVEQSRFYSTFTGPAVY 233 Query: 224 LGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + ++DI+K + W+ + Y+AS +IP+ ++ Sbjct: 234 TDGDKFHKITFADIDKGKAQVPAPTDSGWVAMVQHYFASAWIPADN--VKREYYVNRVDT 291 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y+ T+ PG S++ T LFAG ++ + P +++ D+GW + Sbjct: 292 NFYRIGIQEPLGTVAPGASVSATARLFAGPQQARMLESIT-----PGLDLVKDYGWLTIV 346 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+F L+ + L+GN+G +I+ TV +KL+FFPL+ Y S A MK++QP++ +RE+ Sbjct: 347 AKPLFWLLEKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRER 406 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 K PQ + + M+ LY+T +NPL GC PI++QIPVF A+Y + S+EMR AP+ GW+ Sbjct: 407 HKG-DPQKMNQEMMTLYRTEKVNPLGGCLPIVIQIPVFMALYWALLSSVEMRGAPWIGWV 465 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ DP I P++M++SMF+Q K++P P D QA ++ + Sbjct: 466 HDLSTPDPFY-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKVMMF 506 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 MP+ F FPAGL++YW +N +SI QQ I +M G Sbjct: 507 MPIAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 545 >gi|187930818|ref|YP_001901305.1| putative inner membrane protein translocase component YidC [Ralstonia pickettii 12J] gi|309780186|ref|ZP_07674937.1| membrane protein insertase, YidC/Oxa1 family [Ralstonia sp. 5_7_47FAA] gi|254773015|sp|B2U820|OXAA_RALPJ RecName: Full=Inner membrane protein oxaA gi|187727708|gb|ACD28873.1| 60 kDa inner membrane insertion protein [Ralstonia pickettii 12J] gi|308920889|gb|EFP66535.1| membrane protein insertase, YidC/Oxa1 family [Ralstonia sp. 5_7_47FAA] Length = 554 Score = 322 bits (825), Expect = 9e-86, Method: Composition-based stats. Identities = 145/579 (25%), Positives = 248/579 (42%), Gaps = 52/579 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM----------------NNERKNIQTVK 44 M+ + + S+ +V + N+ + M + ++ + Sbjct: 1 MDI-KRTILWVIFSLAVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGSTPAGDVPSNA 59 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 S AA +QA + S ++ + L +I+ GA L L + Sbjct: 60 STAAAAGSQAAPATGAASQAPA-SEKIVISTDLLRATIDTDGAIVTKLELLDQK---DHD 115 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 + L + + Y A + + I L Sbjct: 116 GNPMVLF-DRSVERTYLARSGLIG-GDFPNHTTVFAASPGPRDLGTGNDVSITLTADKGG 173 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAV 223 L + + Y+ VTN+ I + + R + + G Sbjct: 174 AKLAKTYVFKRGSYVIDSRFDVTNDGTAPINPTLYLELARDGGAVEQSRFYSTFTGPAVY 233 Query: 224 LGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + ++DI+K ++ W+ + Y+AS +IP+ ++ Sbjct: 234 TDGDKFHKITFADIDKGKAQVPAPTNSGWVAMVQHYFASAWIPADN--VKREYYVNRVDT 291 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y+ T+ PG S++TT LFAG ++ + P +++ D+GW + Sbjct: 292 NFYRIGIQEPLGTVAPGASVSTTARLFAGPQQARMLEAIT-----PGLDLVKDYGWLTIV 346 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+F L+ + L+GN+G +I+ TV +KL+FFPL+ Y S A MK++QP++ +RE+ Sbjct: 347 AKPLFWLLEKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRER 406 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 K PQ + + M+ LY+T +NPL GC PI++QIPVF A+Y + S+EMR AP+ GW+ Sbjct: 407 HKG-DPQKMNQEMMTLYRTEKVNPLGGCLPIVIQIPVFMALYWALLSSVEMRGAPWIGWV 465 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ DP I P++M++SMF+Q K++P P D QA ++ + Sbjct: 466 HDLSTPDPFY-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKVMMF 506 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 MP+ F FPAGL++YW +N +SI QQ I +M G Sbjct: 507 MPIAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 545 >gi|254670910|emb|CBA07484.1| probable inner-membrane protein [Neisseria meningitidis alpha153] Length = 545 Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats. Identities = 135/575 (23%), Positives = 233/575 (40%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q V + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQTAQQQAVTASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y N P + L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + ++L + ++ + YL Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + + N S S RI+R + + + + + + +SD+ Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + + Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y S I G T L+AG + I + + ++ D+G ++ A Sbjct: 284 YSTSVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|91790727|ref|YP_551679.1| protein translocase subunit yidC [Polaromonas sp. JS666] gi|91699952|gb|ABE46781.1| protein translocase subunit yidC [Polaromonas sp. JS666] Length = 580 Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats. Identities = 136/603 (22%), Positives = 244/603 (40%), Gaps = 66/603 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM--------------------------- 33 M + + +V W + VY + Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDQWQVYNGQKATFFPATTQSAKAPAAATSAPAASASSVP 60 Query: 34 --NNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDD 91 + + V A A + RV + L + + +G Sbjct: 61 VSPSTASAVPAVPGSAPGAAPGAVPAGAPSPAAAATRERVVVNTDVLALTFDSEGGTLVH 120 Query: 92 LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151 + ++++ V L +T Y A+ +++ P T+ ++ G+ Sbjct: 121 SAFTRFKDMANTDAGFVLL--DESTNRVYVAQTGLIASGTGGTFPTHKTLMTVVPGERSL 178 Query: 152 PTTPIKLVFKN-----ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK 206 +L K L + Y + V N + +++R Sbjct: 179 KDGQNELQVKFESADLGGVKLVKTYTLKRGSYDIAVRHDVINTGSAPVAPQLYMQLVRDG 238 Query: 207 --PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS-NFHESNSWLGISDKYWASVF 263 P ++ + G K + ++ DIE + + +N ++ + Y+A+ + Sbjct: 239 NKPPGESSFYSTFTGPAIYTEAKKYQKVEFKDIENNKVDVEKQATNGYVAMVQHYFAAAW 298 Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 I + + + Y +I PG + T + LF G +E + Sbjct: 299 ILADGLKRDLFLRKVDAN--LYAVGLITPLDSIAPGATKTIDSRLFVGPQEEKKLEALA- 355 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 P E++ D+GW +AKP++ L+ + + N+G +I+ + +K+ F+ L K Y Sbjct: 356 ----PGLELVKDYGWLTILAKPLYWLLDKLHGFLLNWGWSIVALVLLLKIAFYWLNAKAY 411 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S A MK I PKI E+RE+ K PQ +Q+AM+++Y+ +NP+ GC+PI++QIPVF A+ Sbjct: 412 ASMAKMKAINPKIMEMRERLKD-KPQEMQQAMMKIYREEKVNPMGGCFPIMVQIPVFIAL 470 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y V+ S+EMR+AP+ WI DL+A DP I P++M+L+ + Sbjct: 471 YWVLLSSVEMRNAPWVLWIHDLSAPDPFF-------------------ILPVLMTLTTML 511 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q ++P P D QA ++ +MP++F FPAGL++YW +N++SI QQ VI G Sbjct: 512 QTALNPAPPDPMQAKLMWFMPLIFSVMFFFFPAGLVLYWITNNILSIAQQWVINTRMGVP 571 Query: 564 IGL 566 Sbjct: 572 PQF 574 >gi|148654185|ref|YP_001281278.1| putative inner membrane protein translocase component YidC [Psychrobacter sp. PRwf-1] gi|148573269|gb|ABQ95328.1| protein translocase subunit yidC [Psychrobacter sp. PRwf-1] Length = 566 Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats. Identities = 126/584 (21%), Positives = 234/584 (40%), Gaps = 57/584 (9%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ------------ 45 M++ + IA+ + ++V AWQ Y + ++ T Sbjct: 1 MQKILRVLIIIAMLITAYLLVLAWQKDYANVPATSADAVTPSVSTSTTGADIPTTAGASD 60 Query: 46 -PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 P + D + + + I+ G LR Y+ + S+ Sbjct: 61 IPAATATDIPSSKADSESTEAKAGTLINVTTDRYQVKIDPVGGDVVYAALRDYNAKLHSD 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTT---PIKLVFK 161 + V L + + Y A+ + ++ P + L +K Sbjct: 121 NSFVLL--EDSGQRVYVAQSGLIGPNGIDTASGRAKYSYQSDNYVMQPGQKTLTVPLTYK 178 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT------FG 215 + + Y ++ + N ++ R + + Sbjct: 179 QDGVTITKSFTFTQGKYPIRVNYNINNTGTQPWNGQVFAQLKRDSSKDPGMSDKGALSMA 238 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G D + K+ D ++ W+GI Y+ S + P+ F QF Sbjct: 239 TYLGGAWGTPDDDYNKLKFKDFNDGELTA-ASDKGWVGIVQHYFVSAWTPNN---FTGQF 294 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + ++ I + K T L+AG K+ ++ P +D Sbjct: 295 FSREKAGDHF-IGMNSEPIVVPANKQKDVTATLYAGPKDQESLIEVA-----PGLNKTVD 348 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G+ + I+K +F ++ + ++GN+G +I+ T+ VK+ + K Y S A M+ I P+ Sbjct: 349 YGFLWPISKVLFAILEGIHKVIGNWGWSIIALTLLVKIALMWFSNKSYYSMAKMRAIAPR 408 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + L+E+ ++ + M+ +YK +NP+AGC PILLQ+P+F A+Y V+ S+E+RH Sbjct: 409 LQALKEEHGDDRMKM-SQEMMAIYKEEQVNPMAGCLPILLQMPIFLALYWVLVESVELRH 467 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 AP+ WI+DL+A DP I P++M SMF Q SP P D Sbjct: 468 APWILWIQDLSAMDPWF-------------------ILPMLMGASMFAQQMFSPQPTDPM 508 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 QA ++ ++P++F + FPAGL++YW+ +N+ ++ QQ ++ K Sbjct: 509 QAKVMKFLPIIFTLFMLFFPAGLVLYWTVNNLFTMGQQYIVNKK 552 >gi|240079892|ref|ZP_04724435.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae FA19] gi|268596034|ref|ZP_06130201.1| inner membrane protein oxaA [Neisseria gonorrhoeae FA19] gi|268549822|gb|EEZ44841.1| inner membrane protein oxaA [Neisseria gonorrhoeae FA19] Length = 545 Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats. Identities = 139/575 (24%), Positives = 237/575 (41%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQKQAATASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y N P V L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFV--LFGDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + T ++L N + ++ + + YL Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKDSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + + N S S RI+R + + + + + + +SD+ Sbjct: 164 VNVRFDIANGSAQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + + Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRSDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A S I G T L+AG + I + + ++ D+G ++ A Sbjct: 284 YSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQTIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTISQQWHINRS 533 >gi|145590263|ref|YP_001156860.1| 60 kDa inner membrane insertion protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189036355|sp|A4T0N2|OXAA_POLSQ RecName: Full=Membrane protein oxaA gi|145048669|gb|ABP35296.1| protein translocase subunit yidC [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 557 Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats. Identities = 149/586 (25%), Positives = 258/586 (44%), Gaps = 53/586 (9%) Query: 1 MERNWNYFVAIA-LSVIIVYA-WQNFYVYPRI----EEMNNERKNIQTVKQPNQVDNSYA 54 M+ A+ LS +++Y WQ P + N + + Sbjct: 1 MDFKKTILWAVFSLSGLMLYNNWQVHEGKPSMFGGAPATTASAPNKSGAPAKLDTPVAIS 60 Query: 55 AVLIDDR-----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + + + + + + L+N L I+ GA D L +++++ V Sbjct: 61 GIPSVTQTPTANSAPVESTQKFVLENELLSVEISAAGANVVDAKLLK---ELTADQKPVE 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 + + Y A V+ N +++ SGK + + L + L + Sbjct: 118 IFQ-HTPTHTYVARSGLVAVGNTDLPNHTSLFKLDRSGKDGSGRPFLVLSSERNGVKLEK 176 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK-------PQTATNTFGVQEGFIA 222 + Y + VT + + I+R P + G Sbjct: 177 TFLLNPGSYDIYVGHRVTQVTPNGAPLILYTEIVRDGSEEKKIGPFGGAFSASTFTGPAI 236 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHE----SNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + ++DIEK+ + + W+ + Y+AS +IP + + Sbjct: 237 YTDGGKYKKVSFADIEKNKFTAPSQIAAGQPGWVAMVQHYFASAWIPDDKLPRDIYSGKI 296 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + Y+ TI G ++ LF G +E + P E+L D+G+ Sbjct: 297 DN--DLYRVGMQTQLGTIATGTTVMANAQLFVGPQEERMLETIA-----PGLELLKDYGY 349 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +AKP+F L+ + +N+VGN+G +I+L TV +KL FFPL+ Y S A MK +QP++ Sbjct: 350 LTILAKPIFWLLEHIHNIVGNWGWSIILLTVLIKLAFFPLSAASYKSMARMKEVQPRLAA 409 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++E++K PQ L +AM+++Y+ INPL GC P+++QIPVF ++Y V+ S+EMR AP+ Sbjct: 410 MKEQYKG-EPQKLNQAMMEMYRKEKINPLGGCLPVVIQIPVFISLYWVLLSSVEMRGAPW 468 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DL+ DP I P++M++SMF+Q K++P P D QA Sbjct: 469 ILWIHDLSVPDPYY-------------------ILPVVMAVSMFVQTKLNPTPPDPVQAK 509 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 ++ +MP+VF FPAGL++YW +N++SI QQ I ++ G + Sbjct: 510 VMMYMPIVFSIMFFFFPAGLVLYWVTNNLLSIAQQWQINRLFGKKP 555 >gi|258406259|ref|YP_003199001.1| membrane protein insertase, YidC/Oxa1 family [Desulfohalobium retbaense DSM 5692] gi|257798486|gb|ACV69423.1| membrane protein insertase, YidC/Oxa1 family [Desulfohalobium retbaense DSM 5692] Length = 550 Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats. Identities = 143/586 (24%), Positives = 251/586 (42%), Gaps = 65/586 (11%) Query: 1 MERN-WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ N VA+ LS I++ W + + +N+ N + P ++S + V Sbjct: 1 MDDNTKRVIVAVVLSFIVIVGWNFLFPPQQPPTQSNQAANQTQQETPTVAEDSSSQVPGA 60 Query: 60 DRA------------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 + RV ++ P +IN G + L L+ Y + Sbjct: 61 SQTGDGVVAGRAQQSLSGSTYSPEGSGKRVTVETPLYKATINAAGGVLEHLVLKQYQEAI 120 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 + + V L++ + A + + + + + LV Sbjct: 121 NPGAKNVDLITRGTVQK---APMGLIWQQRPTWSEADWELQGNDLQLGQGESGSLTLVGT 177 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 L E YL V N + + + + + Sbjct: 178 IDGVRLERTLHFSAETYLIDETLNVANARDHSLTGTVSFTMASEQLAEES----RYNRTE 233 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 + + L ++ +D + I + E+ SW GI+ Y+ +P+ Sbjct: 234 LIYFNGGLNKESDTDELQIGI-HPAETVSWGGIASNYFLLAAVPTSG-----NMDLRGKY 287 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 +++ + P +S + + G KE + ++ I +GWF F Sbjct: 288 EDEIYRVALGSQVAVAPEQSAELSCSYYVGPKESEQLAQAPQN-----LLAAIQYGWFDF 342 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+ ++ +FY+ VGN+G+AI+L T+ +K++F+PL++K Y S MK +QP + +L+E Sbjct: 343 IAKPLIKVLKFFYSYVGNYGVAIILLTILIKIVFWPLSQKSYKSMEKMKKLQPMMTQLKE 402 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA----- 456 K+ Q L + M++LYKT+ +NP GC P+LLQIPVF A+Y+ + ++E+RHA Sbjct: 403 KYGD-DRQKLNEEMMRLYKTYKVNPAGGCLPMLLQIPVFIALYQALLGAIELRHAAFITH 461 Query: 457 ---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W+ DL+A DP + PI+M +MF+Q KM+P P D Sbjct: 462 VPFTDIIWLADLSAKDPLY-------------------VTPIVMGATMFLQQKMTPTPGD 502 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 QA ++ +MP++F F SFPAGL++YW +NV+SI QQ ++ + Sbjct: 503 STQAKVMMFMPLIFTFIFLSFPAGLVVYWLVNNVLSIAQQWMLTRK 548 >gi|332308616|ref|YP_004436467.1| membrane protein insertase, YidC/Oxa1 family domain containing [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175945|gb|AEE25199.1| membrane protein insertase, YidC/Oxa1 family domain containing [Glaciecola agarilytica 4H-3-7+YE-5] Length = 543 Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats. Identities = 139/568 (24%), Positives = 252/568 (44%), Gaps = 35/568 (6%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME ++ + I L S ++ WQ Y ++ + +++ N Sbjct: 1 MESQRSFLL-IGLAMVSFLLWQQWQVDYGPQPVQPVESQQTTGSDAPSGNGDVPIATPNN 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + +L SIN G NL Y L+ S +LL PS Sbjct: 60 QNALPSQSVAGKVISVTTDTLQLSINTVGGDVISANLLKYPLEQGS-EGTYSLLRPSGPT 118 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 + A+ V T + S + T + L + + ++ + +++ Sbjct: 119 -IFVAQSGLVGTNGIDKTARPTYSVAQDSYIMQGDTLTVPLTYTAKSGLIVTKEFIFNKN 177 Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + K+ V N S D G++ + + F A + E+ D Sbjct: 178 SHDVKVNYHVENTSSDVKSVKQFGQLKQSTADQGGSMFMPTYRGGAFSTEDERYEKYSFD 237 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + N W + + Y+ S ++P ++ + K +G+A + I Sbjct: 238 DMQDKNLNQTTPAGWAAMIEHYFVSAWVPPQDQTNSLYSKMTQNGNA--IIGVVGQSVDI 295 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG+S+ + L+ G K+ T+ + ++ +D+G+ ++I++P+F + + ++L Sbjct: 296 EPGQSVDIQSSLYLGPKDQDTLKQIAR-----GLDLTVDYGFLWWISQPLFTFLQFIHSL 350 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+G +I+L T+ VK +PL K QY S A M+ ++PK+D L+E++ Q +Q+AM+ Sbjct: 351 VGNWGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGDDK-QKMQQAMM 409 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 ++YK +NP+ GC+P+LLQ+P+F A+Y V+ S+E+RHA F WI DL+ DP Sbjct: 410 EMYKKDKVNPMGGCFPLLLQMPIFLALYWVLLESVELRHADFIFWITDLSVKDPYF---- 465 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFP 535 + PI+ LSM++ K+ P D Q I+ +MPV FP Sbjct: 466 ---------------VLPILTGLSMYLLQKLQPMTMTDPMQQKIMQFMPVAMSLFFFIFP 510 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 AGL++YW SN+I+++Q +I Sbjct: 511 AGLVLYWLISNIITLIQAKIIYASMEKR 538 >gi|317165572|gb|ADV09113.1| putative inner membrane protein translocase component YidC [Neisseria gonorrhoeae TCDC-NG08107] Length = 545 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 137/575 (23%), Positives = 234/575 (40%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q V + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y + P V L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDEHKPFV--LFGDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + ++L N + ++ + YL Sbjct: 104 VAQSELLDAQGNNVLKGIGFTAPQKQYSLEGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + + N S S RI+R + + + + + + +SD+ Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCVAGDCSIDIKRRNDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A S I G T L+AG + I + + ++ D+G ++ A Sbjct: 284 YSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|332702558|ref|ZP_08422646.1| Membrane protein oxaA [Desulfovibrio africanus str. Walvis Bay] gi|332552707|gb|EGJ49751.1| Membrane protein oxaA [Desulfovibrio africanus str. Walvis Bay] Length = 530 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 135/566 (23%), Positives = 226/566 (39%), Gaps = 45/566 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 N +A LS+ I+ W F+ + E Q A+ Sbjct: 1 MENKRLLLATVLSLAILVGWSYFFAPEQPVEQAQAPAPQAQPAPQPQSAQPLEAIPGA-- 58 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A + V ++ P + G L+ Y + + + L+S + Sbjct: 59 AFTSASGKIVTVETPLYTAKLFADGGVLQHFILKNYKTGIEPGAANIDLVSRQAQEK--- 115 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 A L + S + T + V A L ++Y + Sbjct: 116 APLGLIWNGAPTWNRGSWSFEGSDLTLSDDQTGQLSFVCDIAGARLVRTLTFRADNYTVQ 175 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 V N + Q+ + +++ G E + + + Sbjct: 176 DSVRVANQTQAQLSGRLAFTLAGTTLSAEGDSYNPTRVEYLAEGGL---ESESDTDDLAK 232 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 F W G+ Y+ P E + Y+ ++I + PG Sbjct: 233 GLTFTGQVRWGGLLSNYFLLAIAPQTEPATFKALYSDQ----LYRIAVEKSDILLDPGSE 288 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 + F G K + + I +GWF IAKP+ + + + Y+ N+G Sbjct: 289 ASVAADYFLGPKVRELLAAAPAE-----LSRSISYGWFSVIAKPLVLALDWLYSFTHNWG 343 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+L TVF+KL+F+PL++K Y S MK +QP + ++REK Q+ + M+QLY+T Sbjct: 344 VAIILLTVFIKLVFWPLSQKSYKSMNQMKKLQPMMAKIREKHADDRVQM-NQEMMQLYRT 402 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIKDLAAADPTNI 473 + +NP+ GC P++LQIPVF +Y + ++E+RHA F W+ DL+A DP Sbjct: 403 YKVNPMGGCLPMVLQIPVFLGLYNALMGAIELRHAAFIEHLPFTNYIWLADLSAKDPFY- 461 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 I P+IM +MF+Q K++P D Q I+ +MP++F F + Sbjct: 462 ------------------ITPLIMGATMFLQQKLTPAAGDPTQQKIMMFMPLIFTFMFLN 503 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKM 559 FPAGL++YW +NV+SI QQ +M+ Sbjct: 504 FPAGLVLYWLVNNVLSIAQQWWLMRK 529 >gi|95929982|ref|ZP_01312722.1| 60 kDa inner membrane insertion protein [Desulfuromonas acetoxidans DSM 684] gi|95133951|gb|EAT15610.1| 60 kDa inner membrane insertion protein [Desulfuromonas acetoxidans DSM 684] Length = 527 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 154/563 (27%), Positives = 270/563 (47%), Gaps = 43/563 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY---PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 N N VA+ L +I+ + + + + +++KQ VD + Sbjct: 1 MENKNTLVALILMLIVWTGFTFLFPPSENQSPDSEVTAKAEDKSLKQDISVDAQTVVDIQ 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 ++ + + + +N +I++ + DL L+ Y D+ ++S +V+LL S+ Sbjct: 61 NNISNVKTSDRFITFENDVFEATISVSTSTLVDLKLKDYKRDIDNDSDLVSLLDKSDD-- 118 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN--ANNILFERTISLDE 176 L Y + +L N+ + + +++ F + N + +R I Sbjct: 119 --IKSLVYYGNNDFSQLSNALFNTKITDDHVFVSQDSLQVDFYSTVDNFEINKRYIFYKN 176 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y F IV ++ N S D + + + G + D L D Sbjct: 177 KYDFDIVYSLKNISSDSRNGNVVLSLSNFWSEDIKGNRLEFVGPVYFSDD-ELNTIDVED 235 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 I + + +W G +KY+ S I + + S + + Q + ++TI Sbjct: 236 INND----VYSNIAWSGFENKYFFSALIGNDKFSNLL----VKHQNNYVQTNLISTDLTI 287 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G+ + +F G K+ + + + ++D+G+F +AKP+ ++++FY Sbjct: 288 SNGQQLDFKTKVFYGPKDVQILKGVDDN-----LVRVVDYGFFKILAKPLHTVLNFFYGY 342 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GN+G +I+L TV +K+LF+PL +K YVS M+ IQP++ +LREK+ + L + M+ Sbjct: 343 IGNYGFSIILLTVIIKMLFWPLTQKSYVSMKAMQKIQPEMKKLREKYGN-DRESLNRKMM 401 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY+ H +NPL GC P+L+QIPVFFA+YKV+ ++E+RHAPF WI DL+ DP Sbjct: 402 ELYREHRVNPLGGCLPMLVQIPVFFALYKVLLGTIELRHAPFIFWITDLSVKDPYY---- 457 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 I P++M L+MFIQ K++P D QA ++ MPVVF F +FPA Sbjct: 458 ---------------ITPLVMGLTMFIQQKLTPNTMDPMQAKMMLAMPVVFTFLFLNFPA 502 Query: 537 GLIIYWSWSNVISIVQQAVIMKM 559 GL++YW +N+++I QQ +I K Sbjct: 503 GLVVYWLVNNLLTIFQQYLIYKK 525 >gi|326625577|gb|EGE31922.1| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 531 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 136/554 (24%), Positives = 244/554 (44%), Gaps = 52/554 (9%) Query: 19 YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78 WQ + ++ +Q Q + A D A + +K L Sbjct: 1 MIWQAW---------EQDKNPQPQTQQTTQTTTTAAGSAADQGVPASGQGKMITVKTDVL 51 Query: 79 IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138 +IN +G + L Y ++ SN P L + + Y A+ N Sbjct: 52 DLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIYQAQSGLTGRDGPDNPANG 109 Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192 + + + + + +A F +T Y + +V N Sbjct: 110 PRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKTFVFKRGDYAVNVNYSVQNTGEK 169 Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245 + S G++ + T ++ F + A + K+ I + N Sbjct: 170 PLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNV 229 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 W+ + +Y+A+ +IP + + + F + G+ + A + + PG++ T Sbjct: 230 SSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAIGYKAQPVLVQPGQTGAMT 287 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+ Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T V+ + +PL K QY S A M+ +QPKI +RE+ Q + M+ LYK +N Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRQSQEMMALYKAEKVN 401 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP Sbjct: 402 PLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSAQDPYY------------- 448 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y+ Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502 Query: 545 SNVISIVQQAVIMK 558 SN+++I+QQ +I + Sbjct: 503 SNLVTIIQQQLIYR 516 >gi|239818257|ref|YP_002947167.1| 60 kDa inner membrane insertion protein [Variovorax paradoxus S110] gi|239804834|gb|ACS21901.1| 60 kDa inner membrane insertion protein [Variovorax paradoxus S110] Length = 565 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 150/588 (25%), Positives = 248/588 (42%), Gaps = 53/588 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVK------------QP 46 M + + +V W + + + + + + P Sbjct: 1 MNDIRRTILWVIFGFSLVLLWDQWQVFNGNKPTFLPSSKPAAVASAPAGAAAPAAGNGVP 60 Query: 47 NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + + +A + +A A + +V + I+ +GA + L L Y + + Sbjct: 61 SASAATGSAGAVPTQAAAAAPREQVNVTTDLFKAVIDSEGATVNYLELLKYDE--ADRTK 118 Query: 107 IVTLLSPSNTKNAYFAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLV-----F 160 V L ++ Y A+ ++ + PN T +G L Sbjct: 119 HVVLFENASPATRYVAQTGLLNPVDSGERFPNHLTPMAPKAGPREMAEGQNTLEVSFESA 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF--GVQE 218 + + Y + V N S +++RH A F Sbjct: 179 PVGGLKYVKTYVFKRGDYAIGVRHEVVNVSDQPRDAQLYMQLLRHGTVAAGTMFGTNTFT 238 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKE---TSFHSQ 274 G A +K + + DI K I ++ W+ + Y+AS ++ + + Sbjct: 239 GPAAYTNEKKFHKLDFKDIAKGKIEPPPPANDGWIAMVQHYFASAWLLKGDPASEQLRRE 298 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 F+ G Y A I PG + + LFAG +E + P +++ Sbjct: 299 FRVKDLGDNLYTVAMVATLPKIAPGATQVVNSALFAGPEEEKKLEAIA-----PGLDLVK 353 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+G F I+KP++ L++ + ++GN+G AI+ V +K F+ L K Y S A MK I P Sbjct: 354 DYGIFAIISKPLYWLLTQLHGILGNWGWAIVALVVLLKAAFYWLNAKAYASMAKMKAINP 413 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 KI E+RE+ K PQ +Q+ M+++YKT +NP+ GC+PI++QIPVF A+Y V+ S+EMR Sbjct: 414 KIMEMRERLKD-KPQEMQQEMMRIYKTEKVNPMGGCFPIVIQIPVFIALYWVLLSSVEMR 472 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 HAP+ GWI DL+A DP I P++M+L+ Q ++P P D Sbjct: 473 HAPWIGWITDLSAPDPWY-------------------ILPVVMTLTSLFQTWLNPTPPDP 513 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 QA ++ MP+ F FPAGL++YW +NV+SI QQ I K G Sbjct: 514 MQAKLMWIMPLAFSVMFIFFPAGLVLYWITNNVLSIAQQWFINKRLGV 561 >gi|300705597|ref|YP_003747200.1| cytoplasmic insertase, essential for proper integration of ATPase into the membrane [Ralstonia solanacearum CFBP2957] gi|299073261|emb|CBJ44620.1| cytoplasmic insertase, essential for proper integration of ATPase into the membrane [Ralstonia solanacearum CFBP2957] Length = 554 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 147/579 (25%), Positives = 245/579 (42%), Gaps = 52/579 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM----------------NNERKNIQTVK 44 M+ + + S+ +V + N+ + M ++ Sbjct: 1 MDI-KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGGTPAGDVPKSA 59 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 S AA +QAL+ S ++ + + +++ GA L L + Sbjct: 60 ATPAAAGSQAAPATGAASQALA-SEKIVVTTDVIRATVDTAGASLTKLELL----TQKDH 114 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +L + + Y A + + + L Sbjct: 115 DGNPMVLFDRSLERTYLARSGLIG-GDFPNHTTVFAASTGPRDLGTGGEVSLTLTADKGG 173 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAV 223 L + + Y+ VTN+ I + + R + + G Sbjct: 174 AKLAKTYVFKRGSYVIDTRFDVTNDGTAPINPTLYMELARDGGAVEQSRFYSTFTGPAVY 233 Query: 224 LGDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + ++DI+K + W+ + Y+AS +IP+ + Sbjct: 234 TDTDHYHKITFADIDKGKAQVPGATDSGWVAMVQHYFASAWIPAASVKREYYVDRVDTNF 293 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y+ T+ PG S++ T LFAG +E + P +++ D+GW I Sbjct: 294 --YRIGIQEPLGTVAPGASLSATARLFAGPQEARMLEGIT-----PGLDLVKDYGWLTVI 346 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+F L+ + L+GN+G +I+ TV +KL+FFPL+ Y S A MK++QP++ +RE+ Sbjct: 347 AKPLFWLLEKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRER 406 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 K PQ + + M+ LY+T +NPL GC PIL+QIPVF A+Y + S+EMR AP+ GW+ Sbjct: 407 HKG-DPQKMNQEMMTLYRTEKVNPLGGCLPILIQIPVFMALYWALLSSVEMRGAPWLGWV 465 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DLA+ DP I PI+M++SMF+Q K++P P D QA ++ + Sbjct: 466 HDLASPDPFY-------------------ILPILMAVSMFVQTKLNPTPPDPVQAKMMMF 506 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 MP+ F FPAGL++YW +N +SI QQ I +M G Sbjct: 507 MPLAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 545 >gi|126208888|ref|YP_001054113.1| putative inner membrane protein translocase component YidC [Actinobacillus pleuropneumoniae L20] gi|126097680|gb|ABN74508.1| inner membrane protein OxaA [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 493 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 131/512 (25%), Positives = 239/512 (46%), Gaps = 29/512 (5%) Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 A+ A+ + V L++ L +I+ G +L ++ +++S +P L + Sbjct: 3 AASNANTVIAENATQGKTVTLESDVLRLTIDTLGGDVIASDLLAHNAELNSQTPFKLLQT 62 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 + T A + N P + + + F+ + + + Sbjct: 63 GATTYVAQSGLVGKNGIDTNAGRPQYQVAQDTFVLAEGQNEMSVPMTFEKDGVLYTKTFV 122 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 Y + V N + + P G+I +++ + A ++ ++ Sbjct: 123 LKRGSYDVAVNFNVKNQTAATVEVQPYGQIKHTLLESSGSLTMPTYTGGAYSSAETNYKK 182 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + + + + W+ + Y+ S ++P+++ + + + Sbjct: 183 YSFQDMEKANLDINTKAGWVALLQHYFVSAWVPNQDAENTIYSRTNNG---IATIGYRGP 239 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 TI P T T+ L+ G K+ + + ++ +D+GW +FIAKP+F L+++ Sbjct: 240 VTTIAPNSEATITSQLWTGPKDQKEMEATAAN-----LDLTVDYGWAWFIAKPLFALLTF 294 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++V N+G+AI+ T+ VK + +PL K QY S A M+ +QPKI E+RE+F Q + Sbjct: 295 IQSIVTNWGLAIIGVTIVVKTILYPLTKAQYTSMARMRMLQPKIQEMRERFGD-DRQRMS 353 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M++LYK +NP+ GC PIL+Q+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 354 QEMMKLYKEEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGWIQDLSAQDPYY 413 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M SMF+ KMSP P D Q ++ +MPV+F Sbjct: 414 -------------------ILPLLMGASMFLLQKMSPSPVTDPVQQKVMTFMPVMFTVFF 454 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW SN+I+IVQQ +I + + Sbjct: 455 LWFPSGLVLYWLTSNIITIVQQWLIYRNLEKK 486 >gi|242278540|ref|YP_002990669.1| hypothetical protein Desal_1066 [Desulfovibrio salexigens DSM 2638] gi|259515640|sp|C6C0J6|OXAA_DESAD RecName: Full=Inner membrane protein oxaA gi|242121434|gb|ACS79130.1| 60 kDa inner membrane insertion protein [Desulfovibrio salexigens DSM 2638] Length = 539 Score = 321 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 137/571 (23%), Positives = 229/571 (40%), Gaps = 50/571 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM----NNERKNIQTVKQPNQVDNSYAAVL 57 N +A+ALS ++ WQ + + + Q V S Sbjct: 1 MDNKRVILAVALSFAVLLGWQFLFPPQPQQPAPAQQEQTAQPNQAVDSSVAGPVSNQLPD 60 Query: 58 IDDRAQ-ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + + R+ ++ P IN +G + L+ + + ++SP V ++ Sbjct: 61 PASTSAIVSAKGTRLTVETPLYSAVINSQGGLLESFKLKKFKATIDADSPDVDMV----G 116 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD- 175 NA + N + + + + + ER ++ Sbjct: 117 TNALDKAPMGLILNGIATWANGVWGYEGANLNLEGDKLGTLIFRGDVEGFRIERRLTFHA 176 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++YL V N S A + + IA + LVE+ Sbjct: 177 DNYLIDEDVRVINKSNPSGMGRIAFTTATKSLTAADDRYNP--TRIAWFNAEGLVEESDR 234 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D + W I Y+ +P ++ + ++ Sbjct: 235 DTLSETGVTESGKVEWAAIDSNYFILALVPGADS-----VTMKGKLQDDIFRIAAEQNVS 289 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G + + + ID+GWF IAKP+ + + +F+ Sbjct: 290 FDKDIERKLACSYYFGPMDAQLMAKVPGE-----LSKAIDFGWFDIIAKPLVVALEWFHQ 344 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 N+GIAI+L T+ +K+LF+PL+ K Y S MK +QP + +LREK + L K M Sbjct: 345 YTNNYGIAIILLTIVIKILFWPLSHKSYKSMEQMKRLQPMMAKLREKHGD-DREALNKEM 403 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA--------PFWGWIKDLAA 467 +QLYKT+N+NP GC P+LLQIPVFF +YK + ++ +RHA W+ DL+A Sbjct: 404 MQLYKTYNVNPAGGCLPMLLQIPVFFGLYKALMGTVALRHADFVHFLPFTDIVWLADLSA 463 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVF 527 DP I PI+M +MF+Q KM+P D Q I+ ++P+VF Sbjct: 464 KDPLY-------------------ITPIVMGATMFLQQKMTPSAGDPTQQKIMMFLPLVF 504 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F +FP+GL++YW +NV+SI QQ ++M+ Sbjct: 505 TFMFLNFPSGLVVYWMVNNVLSIAQQWMMMR 535 >gi|161869308|ref|YP_001598475.1| putative inner membrane protein translocase component YidC [Neisseria meningitidis 053442] gi|189036354|sp|A9M152|OXAA_NEIM0 RecName: Full=Inner membrane protein oxaA gi|161594861|gb|ABX72521.1| preprotein translocase YidC subunit [Neisseria meningitidis 053442] gi|308390001|gb|ADO32321.1| putative inner membrane protein translocase component YidC [Neisseria meningitidis alpha710] gi|319409783|emb|CBY90091.1| inner-membrane protein OxaA [Neisseria meningitidis WUE 2594] gi|325129442|gb|EGC52272.1| inner membrane protein OxaA [Neisseria meningitidis OX99.30304] gi|325135498|gb|EGC58116.1| inner membrane protein OxaA [Neisseria meningitidis M0579] gi|325201458|gb|ADY96912.1| inner membrane protein OxaA [Neisseria meningitidis M01-240149] gi|325207439|gb|ADZ02891.1| inner membrane protein OxaA [Neisseria meningitidis NZ-05/33] Length = 545 Score = 321 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 134/575 (23%), Positives = 233/575 (40%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q V + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQTAQQQAVTASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y N P + L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + ++L + ++ + YL Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + + N S S RI+R + + + + + + +SD+ Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + + Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y S I G + L+AG + I + + ++ D+G ++ A Sbjct: 284 YSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|238797847|ref|ZP_04641339.1| Inner membrane protein oxaA [Yersinia mollaretii ATCC 43969] gi|238718263|gb|EEQ10087.1| Inner membrane protein oxaA [Yersinia mollaretii ATCC 43969] Length = 531 Score = 321 bits (821), Expect = 3e-85, Method: Composition-based stats. Identities = 136/556 (24%), Positives = 236/556 (42%), Gaps = 54/556 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AWQ + + N + +Q A + +K Sbjct: 1 MIWQAWQVDNNPQSTAQTTQQTANTAPGDKASQAVP------------ASGQGQLITVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 L +IN +G + NL Y + S+ L + Y A+ + Sbjct: 49 DVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFVYQAQSGLTGKSGPDNP 106 Query: 136 PNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL-FKIVDTVTNN 189 N + I L F + +F +T L + + V N Sbjct: 107 ANGERPLFEVPQTSFVLADGQDELRIPLTFTGKDGSVFTKTFVLKRNDYAIGVDYHVKNA 166 Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQKY-SDIEKSSIS 243 S + + G++ + T +N F + A +KY + Sbjct: 167 SDAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAFSSDDTKYKKYSFSDIEDKTL 226 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + W+ + +Y+A+ +IP+ + F G+ F + I PG+ Sbjct: 227 DITTKGGWVAMLQQYFATAWIPAANE--TNTFYSADLGNGLAAIGFKGMPVVIQPGEQKQ 284 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G + Sbjct: 285 LGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFKLLKFIHSFVGNWGFS 339 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + + M+ LYK Sbjct: 340 IIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMSQEMMALYKAEK 398 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP Sbjct: 399 VNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYY----------- 447 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M ++M+ KMSP D Q I+ +MPV+F FPAGL++Y+ Sbjct: 448 --------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGLVLYY 499 Query: 543 SWSNVISIVQQAVIMK 558 SN+++I+QQ +I + Sbjct: 500 IVSNLVTILQQQLIYR 515 >gi|294648708|ref|ZP_06726168.1| Oxa1 family cytochrome oxidase biogenesis protein [Acinetobacter haemolyticus ATCC 19194] gi|292825383|gb|EFF84126.1| Oxa1 family cytochrome oxidase biogenesis protein [Acinetobacter haemolyticus ATCC 19194] Length = 586 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 130/601 (21%), Positives = 245/601 (40%), Gaps = 69/601 (11%) Query: 11 IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 + +++ AWQ Y + +++ + N Q + + + Sbjct: 14 FVTAYLLILAWQKDYGHAAPAPQQQAAVVSAHDVSADLPNAQNATAASDLPQANVTASQQ 73 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + ++ IN KG + L + + + P V L + +N Sbjct: 74 ATETTSVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDQSKNGDQPFVMLENDAN--RT 131 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK---------------LVFKNAN 164 Y A+ + N ++++ + Sbjct: 132 YVAQSGLIGLNGPDSSRNGRPMYDVEKTAYTMEDAKKMATTDGASSQVLTVPLVFKTPEG 191 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + Y + V N S + G++ R F + Sbjct: 192 VEVIKTFTFTQGEYPITVKHQVVNRSQQNWQGQMFGQLKRDNSDDPGKSDQGIFTLGTFL 251 Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271 G + K+S+ ++ N+W+ + Y+ S +IP + + Sbjct: 252 GGAWGTPDAHYNKLKFSNFSDEKLNL-DAKNAWVAMVQHYFVSAWIPGNLKLTQADGQPY 310 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++ + F++ I + G S+ ++G K + Sbjct: 311 TAKLESRQSADKMNIIGFTSPTINVPAGTSMEVDAKFYSGPKIQSELKDLAV-----GLN 365 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW + IAK +F+ + +F+N+VGN+G +I+L T+ VKL+ +PL+ K Y S A M+ Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHNIVGNWGWSIILLTILVKLILWPLSSKSYRSMAKMRV 425 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++ ++E+F + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+ Sbjct: 426 IAPEMQRMKEEFGD-DRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+RHAP+ WI+DL+A DP I P++M ++M++Q ++P P Sbjct: 485 ELRHAPWLLWIQDLSAMDPWF-------------------ILPLLMGVTMYVQQMLNPQP 525 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D QA + MP++F + FPAGL++YW +N I+I+QQ+ I K E ++++ Sbjct: 526 TDPMQAKVFRLMPIIFTVFMLFFPAGLVLYWIVNNAITILQQSFINKS--VEKDRLNKIE 583 Query: 572 S 572 S Sbjct: 584 S 584 >gi|171061052|ref|YP_001793401.1| 60 kDa inner membrane insertion protein [Leptothrix cholodnii SP-6] gi|170778497|gb|ACB36636.1| 60 kDa inner membrane insertion protein [Leptothrix cholodnii SP-6] Length = 559 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 140/585 (23%), Positives = 241/585 (41%), Gaps = 53/585 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF--------YVYPRIEEMNNERKNIQTVKQPNQVDNS 52 M + S+ +V W + P+ + T P ++ Sbjct: 1 MTDLRRALLWGVFSISLVMLWDGWSRHTGQPSMFDPKPAARSVPLAANGTSSVPVPAASA 60 Query: 53 YAAVLIDDRAQALSMSPRVE----LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A + + A + + L + + + +G + L Y D SS S V Sbjct: 61 AAGAALPVASSASAAAVSAAEKVVLTTDVVKATFDSRGGTLVSIELLKY-ADPSSASGHV 119 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----A 163 L + + Y AE + T LP+ T+ N+++G +L + Sbjct: 120 MLF-DQSPQRHYMAESGLIGTGQPGTLPDHTTLMNVVAGDRTLGDGKSELQARFESTAAD 178 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ--TATNTFGVQEGFI 221 L + Y+ + V N + +++R A++ + G Sbjct: 179 GVKLVKTYTLRRGDYVIDVQHEVLNQGAAAVSPQLYLQLVRDGNPLPDASSFYSTFTGPA 238 Query: 222 AVLGDKSLVEQKYSDIEKSS-----ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 + ++SDIEK + W+ + Y+A+ ++P + + Sbjct: 239 VYSEAGKFQKIEFSDIEKRKAGDKVDHVTSAEDGWVAMVQHYFAAAWLPGDKVQREFFSR 298 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 +SD Y + P S LF G +E I P +++ D+ Sbjct: 299 KVSDN--LYAVGMLLPVGEVAPAASRKIDARLFVGPQEEKRIEALA-----PGLDLVKDY 351 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 GW ++KP+F L+ ++ +GN+G AI+ V +K F+ L Y S MK I PK+ Sbjct: 352 GWLTILSKPLFWLLHKLHSYIGNWGWAIVALVVLLKAAFYWLNASAYRSMGKMKAINPKV 411 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ELRE+ K PQ +Q+ M+++Y+ +NPL GC PI +Q+P F A+Y V+ S+EMR A Sbjct: 412 QELRERLKD-KPQQMQQEMMRIYREEKVNPLGGCLPIFVQMPFFIALYWVLLSSVEMRGA 470 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ GW+ DL+ DP I P++M+ + +Q ++P P D Q Sbjct: 471 PWVGWVHDLSVKDPYF-------------------ILPLLMTATTVLQTWLNPTPPDPIQ 511 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 A ++ MP+ F FPAGL++YW +N++SI QQ +I + G Sbjct: 512 AKMMWIMPLAFSVMFFFFPAGLVLYWFTNNLLSIAQQWMINRQLG 556 >gi|257455161|ref|ZP_05620399.1| inner membrane protein OxaA [Enhydrobacter aerosaccus SK60] gi|257447494|gb|EEV22499.1| inner membrane protein OxaA [Enhydrobacter aerosaccus SK60] Length = 563 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 121/571 (21%), Positives = 234/571 (40%), Gaps = 49/571 (8%) Query: 7 YFVAIALS-VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV--------- 56 +A+ ++ +++ AW++ Y + S Sbjct: 9 IIIAMLITGYLLILAWRDDYTNVNKPVAITPTTTAVSSNDVPVAGTSSTPTGDVPTATAT 68 Query: 57 -LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + + + + IN G LR + S P V L + Sbjct: 69 TPTAAPTTQKTGAQLISVMTDKYDIRINPVGGDVVYAALREQTQTLDSKQPFVLL--EED 126 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERTI 172 + Y A+ + T + ++ P L ++ + + Sbjct: 127 SNRVYVAQSGLIGANGIDNSNGRATFTAPSNQFVMQPNQAELVVPLTYQKDGVTIIKSYK 186 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGFIAVLGDKS 228 Y + +TNN + ++ R + + G Sbjct: 187 FTKGQYPINVSYNITNNGTQPWQGQMYAQLKRDNSEDPGKGDKGAISLSTYLGGAWGTPD 246 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 K + W+G+ Y+ + ++P + + F G + Sbjct: 247 QPYNKLKFGNFNDGLKASSDKGWIGMVQHYFVTAWMPKD---YTAYFYSREAGKD-HIIG 302 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F++N +++ P K +T T+ L+AG K + + + +D+G + I+K +F Sbjct: 303 FTSNPVSVAPNKQVTLTSALYAGPKIQTNLKPLAE-----GLDKTVDYGILWPISKVLFW 357 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ + ++GN+G +I++ T+ VK+ P+A K Y S A M+ + P++ L+E++ Sbjct: 358 ILDNVHKVLGNWGWSIIVLTLLVKIALMPIANKSYHSMAKMRAVAPRLQALKEEYGD-DR 416 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + + M+++YK +NP+AGC P+LLQ+P+F A+Y V+ S+++RHAP+ GWI+DL++ Sbjct: 417 MRMSQEMMRIYKEEKVNPMAGCLPVLLQMPIFLALYWVLVESVQLRHAPWIGWIRDLSSM 476 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP I P+IM +MF Q ++P P D QA ++ +MP++F Sbjct: 477 DPLF-------------------ILPLIMGAAMFFQQMLNPQPQDPMQARVMKFMPIIFT 517 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + FPAGL++YW+ +N+ S+ QQ I K Sbjct: 518 VFMLFFPAGLVLYWTVNNLFSMAQQYFINKK 548 >gi|153873748|ref|ZP_02002226.1| 60Kd inner membrane protein [Beggiatoa sp. PS] gi|152069784|gb|EDN67772.1| 60Kd inner membrane protein [Beggiatoa sp. PS] Length = 495 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 136/500 (27%), Positives = 225/500 (45%), Gaps = 31/500 (6%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 LS R+ ++ I+ G ++L Y + L++ Sbjct: 12 LSSDSRLYVETDVFKLEIDTSGGDIRRVDLLQYPVAADKPDEPFRLMNEELPNLFVAQSG 71 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFKIV 183 + L + + + + IKL ++N I + + Y+ + Sbjct: 72 LLPAQNAPTHLALYQSEQSSYRLEPGNDSLDIKLHWQNDKGIKVTKIYTFHRGSYVIDVK 131 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE----QKYSDIEK 239 V N S++ G+ R + + F A+ ++L E D Sbjct: 132 YLVDNQSVEPWAGQLYGQFQRTQADLGGSRFIYTYMGGAISSPETLYEKIPFDDIEDSSF 191 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + + + W+ + Y+ S ++P E K L DG RY F + + PG Sbjct: 192 NQENRPAWAEGWIAMLQHYFVSAWVPKPEQIHKYYTKMLKDG-NRYVLGFYGPKQVVAPG 250 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 LF G K + P ++ +D+GW +FIA+P+F ++ + ++ GN Sbjct: 251 TQEIFNIALFVGPKLQNKLLELA-----PGLDLTVDYGWLWFIAQPLFWVLDWLHDWTGN 305 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G +I+L T+ +KL FF L+ Y S ANM+ +QP++ L+E+F + L +AM++LY Sbjct: 306 WGWSIILLTIMIKLAFFHLSATSYKSMANMRRLQPRMITLKERFGDDKTK-LNQAMMELY 364 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K INPL GC PIL+QIPVF A+Y V+ S+E+R A F WIKDL++ DP Sbjct: 365 KKEKINPLGGCLPILVQIPVFIALYWVLLESVELRQADFMWWIKDLSSPDPFF------- 417 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 + P+IM +M +Q ++P P D Q ++ +P+VF + FPAGL+ Sbjct: 418 ------------VLPLIMGATMLVQHFLNPAPIDPIQQKMMMMLPIVFTVFFAFFPAGLV 465 Query: 540 IYWSWSNVISIVQQAVIMKM 559 +YW +NV+SI QQ VI K Sbjct: 466 LYWVANNVLSITQQWVITKK 485 >gi|254804276|ref|YP_003082497.1| inner membrane protein OxaA [Neisseria meningitidis alpha14] gi|254667818|emb|CBA03804.1| inner membrane protein OxaA [Neisseria meningitidis alpha14] Length = 545 Score = 320 bits (820), Expect = 4e-85, Method: Composition-based stats. Identities = 136/575 (23%), Positives = 233/575 (40%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q V + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y N P + L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + ++L + ++ + YL Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + + N S S RI+R + + + + + + +SD+ Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGECSIDIKRRNDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A S I G T L+AG + I + + ++ D+G ++ A Sbjct: 284 YSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|332976008|gb|EGK12879.1| YidC/Oxa1 family membrane protein insertase [Psychrobacter sp. 1501(2011)] Length = 572 Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats. Identities = 130/590 (22%), Positives = 238/590 (40%), Gaps = 63/590 (10%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ + IA+ + ++V AWQ Y + ++ T + S Sbjct: 1 MQKILRVLIIIAMLITAYLLVLAWQKDYANVPATSADAVTPSVSTSTTGADIPTSTGTGT 60 Query: 58 IDDRAQALS------------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 D A S + + I+ G LR Y+ Sbjct: 61 SDIPAATASATTDVPSSEVGGENTNAKQGALINVTTDRYQIKIDPVGGDVVYAALRNYNA 120 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI--- 156 + S +P V L ++ + Y A+ + ++ P Sbjct: 121 TLDSKNPFVLL--ENSGQRVYVAQSGLIGPNGIDTPAGRAKYSYQSDNYVMQPGQKKLEV 178 Query: 157 KLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN--- 212 L +K + + +T + + Y + + N S ++ R + Sbjct: 179 PLTYKQEDGVTITKTFTFTEGKYPISVNYNINNTSGKAWNGQLFAQLKRDSSKDPGMADK 238 Query: 213 ---TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 + G D + K+ D + W+GI Y+ S + P Sbjct: 239 GAISMATYLGGAWGTPDDDYNKLKFKDFNDGDLKA-ASDKGWVGIVQHYFVSAWTP---Q 294 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 +F QF + ++ + + K T L+AG K+ ++ P Sbjct: 295 NFTGQFFSREKAGDHF-IGMNSEQFMVPAAKQKDITATLYAGPKDQDSLLEVA-----PG 348 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 +D+G+ + I+K +F ++ + ++GN+G +I+ T+ VKL + K Y S A M Sbjct: 349 LNKTVDYGFLWPISKVLFAVLEGIHKVIGNWGWSIIALTLLVKLALMWFSNKSYYSMAKM 408 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + I P++ L+E+ ++ + M+ +YK +NP+AGC PILLQ+P+F A+Y V+ Sbjct: 409 RAIAPRLQALKEEHGDDRMKM-SQEMMAIYKEEQVNPMAGCLPILLQMPIFLALYWVLVE 467 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+E+RHAP+ WI+DL++ DP I P++M SMF Q SP Sbjct: 468 SIELRHAPWILWIQDLSSMDPWF-------------------ILPMLMGASMFAQQMFSP 508 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 P D QA ++ ++P++F + FPAGL++YW+ +N+ ++ QQ ++ K Sbjct: 509 QPTDPMQAKVMRFLPIIFTLFMLFFPAGLVLYWTVNNLFTMAQQYIVNKK 558 >gi|257095987|ref|YP_003169628.1| 60 kDa inner membrane insertion protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048511|gb|ACV37699.1| 60 kDa inner membrane insertion protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 560 Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats. Identities = 133/554 (24%), Positives = 227/554 (40%), Gaps = 37/554 (6%) Query: 19 YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL---SMSPRVELKN 75 W + Y + + + P N +A + + A+ + +K Sbjct: 18 MLWDAWQKYNQPKPAATAAVSTPQAPAPQLSTNLHAPLPVLPDTAAVRAPDKAETFTVKT 77 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 + I+ G L L Y + K+ Y A+ + Sbjct: 78 DLFVAHISRIGGDIVRLELNDYKDSTNKQKDFALF----EAKHQYVAQSGLIGEGLPNHK 133 Query: 136 PNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQI 194 + + V T ++L + +T + YL + + N S ++ Sbjct: 134 TSFSAVAGSAELGADAKTVVLRLEAPAGGGLKVAKTYTFTRGSYLIDVAHEIDNGSDKEV 193 Query: 195 RFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN-FHESNSW 251 ++ R P ++ G + ++DIEK + W Sbjct: 194 LAHAYYQLQRDTKAPDGESSMVSTYTGPAVYTNQDKYQKVDFADIEKGKAKFATRADDGW 253 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ-AKFSANEITILPGKSITTTNFLFA 310 + + Y+ + +IP+ + L G PG +T + ++A Sbjct: 254 IAMVQHYFVAAWIPATGLPREFYMRKLEGGVNPAVAVGVIVPAPVAAPGAKVTFSVPVYA 313 Query: 311 GAKEFPTIHHYEK-----DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 G + T+ K + +++D+GW +A P+F + + +VGN+G AI+ Sbjct: 314 GPQIQATLEQLAKPEADGGIGAQGLPLVVDYGWLTIVAAPIFWCLEAIHTVVGNWGWAIV 373 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 L T+ +KLLFFPL+ Y S A M+ + P++ L+E++ Q L + M+ LYK IN Sbjct: 374 LLTIGIKLLFFPLSAASYKSMAKMRTVTPRLMALKERYGD-DRQKLNQEMMALYKREKIN 432 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC PI +QIPVF A+Y + ++E+R AP+ WI DL+A DP Sbjct: 433 PLGGCLPIAVQIPVFIALYWALLGAVEIRDAPWILWITDLSAQDPYY------------- 479 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + P+IM ++M IQ K++P P D QA ++ MP +F FPAGL++YW + Sbjct: 480 ------VLPVIMVVTMLIQTKLNPTPPDPIQAKVMMMMPFIFGAMFFFFPAGLVLYWVVN 533 Query: 546 NVISIVQQAVIMKM 559 NV+SI QQ I +M Sbjct: 534 NVLSIAQQWQITRM 547 >gi|58584448|ref|YP_198021.1| putative inner membrane protein translocase component YidC [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418764|gb|AAW70779.1| Preprotein translocase subunit YidC [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 572 Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats. Identities = 210/577 (36%), Positives = 330/577 (57%), Gaps = 21/577 (3%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYP-RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M N +A LS++I+ +W+ Y E+ + +NI+ ++ N A V+ Sbjct: 1 MSEARNLILAAILSILIIVSWRIIYDNFLNAEQDHPLIENIEHIE----SFNDLAPVIHQ 56 Query: 60 DRAQALSM--SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 R++ ++ R+ L N + GSI+LKGA+FDDL L Y L+ +SP V LLSP+ +K Sbjct: 57 SRSEIINSTREQRINLTNNMVKGSISLKGARFDDLILTNYCLEPDPSSPQVVLLSPAESK 116 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 + YFAE ++ ++P+S T W LT + L + N N I+F +SLD + Sbjct: 117 DVYFAEFGWLDPNGKTKVPDSKTFWQ-AEKTELTNQKAVNLFWNNENGIVFRMKVSLDNN 175 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+FK+ V NN+ D + P G+I R + + + EG + + L E Y ++ Sbjct: 176 YMFKVEQIVENNTKDNVVLVPYGKINRKRDNINESYWISHEGILGAFDN-KLEEWTYKNV 234 Query: 238 EKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEIT 295 K + S +W G +DKYW + IP K + K+ + + ++Q F Sbjct: 235 AKKHLIKASTSKKNWFGFADKYWLTAIIPEKFDKTNVSIKHTNANNVDKFQVDFVKPYKN 294 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 ILPG S + N+ FAGAK+ + +Y+ L IP F+ +D+G YFI KP+F+L+ YF Sbjct: 295 ILPGTSASNVNYFFAGAKKLNLLDYYKSTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNF 354 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 ++ NFG+AI+L T+ +KLL PL+ + YVS MK++QP++ ++E +K + K Sbjct: 355 VLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKMKSLQPEVARIKELYKNDSLK-QHKET 413 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 I L+K +N+NP++ PIL+QIPVFFA+YKV+ +++EMRHAPF WIKDL+ +DPTNIFT Sbjct: 414 IALFKKNNVNPMSSILPILVQIPVFFALYKVLFVTIEMRHAPFCLWIKDLSTSDPTNIFT 473 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALS 532 LFG+ + P + +GI PII+ ++M IQ K+ D QA ++ + P + +F S Sbjct: 474 LFGLFNYNFP--ISIGILPIILGITMIIQQKIGEKGQTNKDDIQANVMKFFPYISIFIFS 531 Query: 533 SFPAGLIIYWSWSNVISIVQQ----AVIMKMHGAEIG 565 SFPAGL+IYW +SNVI+++QQ + + G + Sbjct: 532 SFPAGLVIYWIFSNVITLIQQSLIKLFLTRKLGINVE 568 >gi|226952826|ref|ZP_03823290.1| inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase [Acinetobacter sp. ATCC 27244] gi|226836447|gb|EEH68830.1| inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase [Acinetobacter sp. ATCC 27244] Length = 586 Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats. Identities = 130/601 (21%), Positives = 245/601 (40%), Gaps = 69/601 (11%) Query: 11 IALSVIIVYAWQNFYVYP-----------RIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 + +++ AWQ Y + +++ + N Q + + + Sbjct: 14 FVTAYLLILAWQKDYGHAAPAPQQQAAVVSAHDVSADLPNAQNATAASDLPQANVTASQQ 73 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + ++ IN KG + L + + + P V L + +N Sbjct: 74 ATETTSVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDQSKNGDQPFVMLENDAN--RT 131 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK---------------LVFKNAN 164 Y A+ + N ++++ + Sbjct: 132 YVAQSGLIGLNGPDSSRNGRPMYDVEKTAYTMEDAKKMATTDGASSQVLTVPLVFKTPEG 191 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT----ATNTFGVQEGF 220 + + Y + V N S + G++ R F + Sbjct: 192 VEVIKTFTFTQGEYPITVKHQVVNRSQQNWQGQMFGQLKRDNSDDPGKSDQGIFTLGTFL 251 Query: 221 IAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP-------SKETSF 271 G + K+S+ ++ N+W+ + Y+ S +IP + + Sbjct: 252 GGAWGTPDAHYNKLKFSNFSDEKLNL-DAKNAWVAMVQHYFVSAWIPGNLKLTQADGQPY 310 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 ++ + F++ I + G S+ ++G K + Sbjct: 311 TAKLESRQSADKMNIIGFTSPTINVPAGTSMEVDAKFYSGPKIQSELKDLAV-----GLN 365 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+GW + IAK +F+ + +F+N+VGN+G +I+L T+ VKL+ +PL+ K Y S A M+ Sbjct: 366 QTVDYGWLWPIAKLLFLGLQFFHNIVGNWGWSIILLTILVKLILWPLSSKSYRSMAKMRV 425 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I P++ ++E+F + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+ Sbjct: 426 IAPEMQRMKEEFGD-DRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESV 484 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+RHAP+ WI+DL+A DP I P++M ++M++Q ++P P Sbjct: 485 ELRHAPWLLWIQDLSAMDPWF-------------------ILPLLMGVTMYVQQMLNPQP 525 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 D QA + MP++F + FPAGL++YW +N I+I+QQ+ I K E ++++ Sbjct: 526 TDPMQAKVFRLMPIIFTVFMLFFPAGLVLYWIVNNAITILQQSFINKS--VEKDRLNKVE 583 Query: 572 S 572 S Sbjct: 584 S 584 >gi|325204858|gb|ADZ00312.1| inner membrane protein OxaA [Neisseria meningitidis M01-240355] Length = 545 Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats. Identities = 134/575 (23%), Positives = 233/575 (40%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q V + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQTAQQQAVTASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y N P + L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + ++L + ++ + YL Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + + N S S RI+R + + + + + + +SD+ Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + + Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCSAGDCRIDIKRRNDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A S I G T L+AG + I + + ++ D+G ++ A Sbjct: 284 YSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PIIM+ +M Q ++PPP D QA ++ MP Sbjct: 458 LSRADPYY-------------------ILPIIMAATMVAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++F FPAGL++YW +N+++I QQ I + Sbjct: 499 LIFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|225077258|ref|ZP_03720457.1| hypothetical protein NEIFLAOT_02313 [Neisseria flavescens NRL30031/H210] gi|224951402|gb|EEG32611.1| hypothetical protein NEIFLAOT_02313 [Neisseria flavescens NRL30031/H210] Length = 548 Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats. Identities = 142/575 (24%), Positives = 240/575 (41%), Gaps = 55/575 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A+SV I W++F+ P+ Q + AA Sbjct: 1 MDF-KRLMAFFAISVAIFAGWEHFFPSPKP-----------NPAQQAAQQQTAAAPAKAA 48 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AL+ + + + ++ I+ K L L Y + P V L + + Y Sbjct: 49 AEAALAPASPITVTTDTVKAVIDEKSGDLRQLTLLQYKATGDEHKPFV--LFNDSKEYTY 106 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + ++L N + ++ + YL Sbjct: 107 VAQSELLDAQGNNILKGIGFSAPQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 166 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237 + +TN++ + S RI+R + + G + + + +SD+ Sbjct: 167 VNVRFDITNSNGQPVNLSADYRIVRDHSEPEGQGYFTRSYVGPVVYTPEGDFQKVSFSDL 226 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + Sbjct: 227 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCAAGECSIDIKRRNDNL 286 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A S I G T L+AG + I + + ++ D+G ++ A Sbjct: 287 YSASVSVPLAAIPAGAKAETAINLYAGPQTTSVIANIAD-----KLQLAKDYGKVHWFAS 341 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 342 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 401 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 402 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 460 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I P+IM+ +MF Q ++PPP D QA ++ MP Sbjct: 461 LSRPDPFY-------------------ILPLIMAATMFAQTFLNPPPTDPMQAKMMKIMP 501 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 502 LVFSVMFFFFPAGLVLYWVVNNLLTITQQWHINRS 536 >gi|319639364|ref|ZP_07994115.1| inner membrane protein oxaA [Neisseria mucosa C102] gi|317399548|gb|EFV80218.1| inner membrane protein oxaA [Neisseria mucosa C102] Length = 548 Score = 320 bits (818), Expect = 5e-85, Method: Composition-based stats. Identities = 140/575 (24%), Positives = 239/575 (41%), Gaps = 55/575 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A+SV I W++F+ P+ Q + AA Sbjct: 1 MDF-KRLMAFFAISVAIFAGWEHFFPSPKP-----------NPAQQAAQQQTAAAPAKAA 48 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AL+ + + + ++ I+ K L L Y + P V L + Y Sbjct: 49 AEAALAPASPITVTTDTVKAVIDEKSGDLRQLTLLQYKATGDEHKPFV--LFNDGKEYTY 106 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + + ++L N + ++ + YL Sbjct: 107 VAQSELLDAQGNNVLKGISFSAPQKQYSLEGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 166 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237 + +TN+ + S RI+R + + G + + + +SD+ Sbjct: 167 VNVRFDITNSKGQPVNLSADYRIVRDHSEPEGQGYFTRSYVGPVVYSPEGGFQKVSFSDL 226 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + + Sbjct: 227 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKDGQSVCAAGDCRIDIKRRNDNL 286 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A S I G T L+AG + I + + ++ D+G ++ A Sbjct: 287 YSASVSVPLAAIQAGAKAETAINLYAGPQTTSVIANIAD-----KLQLAKDYGKVHWFAS 341 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 342 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 401 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 402 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 460 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I P+IM+ +MF Q ++PP D QA ++ MP Sbjct: 461 LSRPDPFY-------------------ILPLIMAATMFAQTYLNPPSTDPMQAKMMKVMP 501 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++F FPAGL++YW +N+++I QQ I + Sbjct: 502 LIFSIMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 536 >gi|322421977|ref|YP_004201200.1| membrane protein insertase, YidC/Oxa1 family [Geobacter sp. M18] gi|320128364|gb|ADW15924.1| membrane protein insertase, YidC/Oxa1 family [Geobacter sp. M18] Length = 537 Score = 320 bits (818), Expect = 6e-85, Method: Composition-based stats. Identities = 146/566 (25%), Positives = 242/566 (42%), Gaps = 39/566 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN-------NERKNIQTVKQPNQVDNSY 53 ME +AI LS+ I+YA+ + + + Q + Sbjct: 1 ME--KRLVIAILLSIGILYAYSFIFPPAKPVPPAGGAKQGVVSSATVAPALQAAATAAAP 58 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 +A + + V + + +GA L+ Y + L++ Sbjct: 59 SAAAPVAIPPQATTAKDVTVDTDLYSAVFSSQGAGLKKFVLKKYKDVAGPKGQDIVLVNE 118 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + N L N + +S ++ ++F++ S Sbjct: 119 TAANRFGLLTDSREFGLNPTALYNVSANELKLSN---GSKGTLEFTTTTPQGVVFKKIYS 175 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 + NS + + G E + + V+ + Sbjct: 176 FSGDAYRIGLTEQVQNSGAAQVAGALHLLQNSRVIDQKAGGGRYEVYGPSTLTEDAVKSE 235 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + + + +S +W +DKY+ I K + +Q G + Sbjct: 236 KLNNLLKAPVQYDKSIAWSSFADKYFTESVIAEKGS--IAQLHMTRPGTDAMLRDIVSPA 293 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 +T+ PG++ + + L+ G K+ + E +ID+GWF IAKP+ + + + Sbjct: 294 VTVAPGQTASVSYALYYGPKDLDILKAQGSS-----LEKVIDYGWFAPIAKPLVVFLKFL 348 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y GN+GIAI++ T +KL+FFPL K Y S +M+ +QPK+ L+EK+K + K Sbjct: 349 YKYTGNYGIAIIIITCILKLVFFPLTHKSYKSMKDMQKLQPKMTALKEKYKNDRD-AMNK 407 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A+++LYKTH +NPL GC P+L+QIPVFF +Y+ + S+E+RHAPF+ WI DL+A DP Sbjct: 408 AVMELYKTHKVNPLGGCLPMLVQIPVFFGLYRALMYSIELRHAPFYLWITDLSAKDPYY- 466 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 + PIIM +MFIQ KM+P D QA ++ +PVVF F + Sbjct: 467 ------------------VTPIIMGATMFIQQKMTPSNMDPVQAKMMLMLPVVFTFMFLN 508 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKM 559 FP+GL+IYW +NV++I QQ I K Sbjct: 509 FPSGLVIYWLVNNVLTIAQQMYINKS 534 >gi|218767519|ref|YP_002342031.1| putative inner membrane protein translocase component YidC [Neisseria meningitidis Z2491] gi|38503190|sp|Q9JW48|OXAA_NEIMA RecName: Full=Inner membrane protein oxaA gi|121051527|emb|CAM07824.1| putative integral membrane protein [Neisseria meningitidis Z2491] Length = 545 Score = 320 bits (818), Expect = 6e-85, Method: Composition-based stats. Identities = 134/575 (23%), Positives = 233/575 (40%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q V + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQTAQQQAVTASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y N P + L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + ++L + ++ + YL Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + + N S S RI+R + + + + + + +SD+ Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + + Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y S I G + L+AG + I + + ++ D+G ++ A Sbjct: 284 YSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVINNLLTIAQQWHINRS 533 >gi|220905229|ref|YP_002480541.1| YidC translocase/secretase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869528|gb|ACL49863.1| YidC translocase/secretase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 548 Score = 320 bits (818), Expect = 6e-85, Method: Composition-based stats. Identities = 144/579 (24%), Positives = 251/579 (43%), Gaps = 53/579 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY----PRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N +AI L +I++ W Y R + + ++ Q Q A Sbjct: 1 MQDGKNLLIAIVLCLIVIVGWGYLAEYMGWATRPAPVAQQSQDQQAAHPQPQAQTQAAPA 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + + + P + G L+ Y + ++++SP V ++ P + Sbjct: 61 QASLPVFTPAPGRDLTVDTPLYEAVVYSGGGALRSFKLKKYQVGLAADSPQVNMVDPKSA 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKI-----LTPTTPIKLVFKNANNILFERT 171 + A + N + S W++ +G+ ++LV + N + Sbjct: 121 QVAPLGLVI------NSQPSWSTGQWSMDTGENGLALEQGQQGTLRLVGEVDNLRVVREM 174 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 +YL + V N + + A + + +A D SL E Sbjct: 175 TFSATNYLIREKIRVVNQTQQARSVRVSYTVAADASNAAGDRYDA--MRVAWDNDGSLKE 232 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + + +S+ W G Y+ + +P + + + Y+ Sbjct: 233 ESSASTLESTGVQAVGKIYWAGAMSTYFLAAVLPGDVNNVTVKGVMQQN---VYRTAVEE 289 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 E + PG+ + + G K + P+ +D G+F+ IAK + L+ Sbjct: 290 QETLLGPGQEKELSVSYWVGPKVRSELQAVS-----PQLAKSVDLGFFHIIAKGLLWLLE 344 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 +F+ V N+G+AI+L TV +K F+PL K Y S MK +QP + E+REKFK + Q+ Sbjct: 345 FFHKYVHNWGLAIILLTVLIKAAFWPLTAKSYASMEKMKKLQPHMMEIREKFKDNKEQM- 403 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIK 463 K ++ LYKT+ +NP +GC PIL+Q+PVFF +Y+ + S+E+RHAPF W+ Sbjct: 404 NKEVMALYKTYGVNPASGCVPILIQLPVFFGLYQALLTSIELRHAPFITYLPGTDILWLA 463 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I P+IM L+MF+Q +MSPP D Q I+ ++ Sbjct: 464 DLSTKDPLY-------------------ITPVIMGLTMFLQQRMSPPATDPTQQKIMMFL 504 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P++F +FP+GL++YW +NV+SI QQ ++++ A Sbjct: 505 PLIFTALFLNFPSGLVLYWLVNNVLSIAQQQMMIRKFKA 543 >gi|304388454|ref|ZP_07370560.1| YidC/Oxa1 family membrane protein insertase [Neisseria meningitidis ATCC 13091] gi|304337571|gb|EFM03734.1| YidC/Oxa1 family membrane protein insertase [Neisseria meningitidis ATCC 13091] Length = 545 Score = 319 bits (817), Expect = 7e-85, Method: Composition-based stats. Identities = 134/575 (23%), Positives = 233/575 (40%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q V + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y N P + L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + ++L + ++ + YL Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + + N S S RI+R + + + + + + +SD+ Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + + Sbjct: 224 DNDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y S I G + L+AG + I + + ++ D+G ++ A Sbjct: 284 YSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|262273127|ref|ZP_06050944.1| OxaI/YidC membrane insertion protein [Grimontia hollisae CIP 101886] gi|262222883|gb|EEY74191.1| OxaI/YidC membrane insertion protein [Grimontia hollisae CIP 101886] Length = 522 Score = 319 bits (817), Expect = 8e-85, Method: Composition-based stats. Identities = 126/546 (23%), Positives = 229/546 (41%), Gaps = 37/546 (6%) Query: 23 NFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSI 82 + Q + V S A + + + L++ L ++ Sbjct: 3 YLNWTEATNPQPQGQGVTQQAQHSGDVPASSDASQPLTQDAV--SNKLITLQSDVLTLTV 60 Query: 83 NLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVW 142 + +G L Y + S++ V L + + + A+ + L Sbjct: 61 DTQGGDIIHAELNQYDAEFDSDNKFVLL--KNQPDHVFVAQSGLIGADGIDTLNGRAKFT 118 Query: 143 NLISGKILTPTTPI---KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPR 199 + ++ L + + + +Y + T+ N S + Sbjct: 119 ANGTDFVMADGQDELRVPLTLEKDGITYTKTFVLKRNNYAVDVDYTIDNQSGKEANVQMY 178 Query: 200 GRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKY 258 ++ ++ + T G + D + + D++ +++ W G+ Y Sbjct: 179 AQLKQNLLDDGGSLTMPTYRGGVYSADDAKYEKYSFDDMKDRNLNLTIAEQGWAGMMQHY 238 Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 + + +IP + + + + T+ G + L+ G K + Sbjct: 239 FVAAWIPHSDGEANLYTRTSNGQGF---IGVRYPTTTVAAGSTAQLDATLWVGPKLQDQM 295 Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 P + +D+GW +FIA P+ L+S VGN+G+AI++ T V+ + +PL Sbjct: 296 EQTA-----PNLNLTVDYGWLWFIASPLHWLLSTIQGFVGNWGVAIIILTFIVRGVMYPL 350 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 K QY S A M+ +QPK+ E+RE+ Q + + M++LYK +NPL GC P+LLQ+P Sbjct: 351 TKAQYTSMAKMRMLQPKLQEMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPLLLQMP 409 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 +F A+Y + S+E+RHAPF WI+DL+A DP + P++M Sbjct: 410 IFIALYWALMESVELRHAPFMLWIQDLSAPDPFY-------------------VLPLLMG 450 Query: 499 LSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 SMF+ KMSP D Q I+N+MPV+F FPAGL++YW SN+++++QQ +I Sbjct: 451 ASMFLIQKMSPSTVTDPMQQKIMNFMPVMFTVFFLWFPAGLVLYWLVSNIVTLLQQTLIY 510 Query: 558 KMHGAE 563 + + Sbjct: 511 RALEKK 516 >gi|172062138|ref|YP_001809790.1| putative inner membrane protein translocase component YidC [Burkholderia ambifaria MC40-6] gi|254772757|sp|B1YQJ7|OXAA_BURA4 RecName: Full=Inner membrane protein oxaA gi|171994655|gb|ACB65574.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria MC40-6] Length = 554 Score = 319 bits (817), Expect = 8e-85, Method: Composition-based stats. Identities = 145/577 (25%), Positives = 240/577 (41%), Gaps = 46/577 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVD-------- 50 M+ I ++ WQ + P + + + + Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGTGATTTTAGE 60 Query: 51 -NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + AA + + V+ G I+ +G L L+ P + Sbjct: 61 VPAAAAGTAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLY 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNI 166 + +T + + + + T N + +KL F+ Sbjct: 118 ITLFDHTAGHTYLARTGLLGGDFPNHNDVYTQVNAGPTSLTGDQNALKLSFESPVKGGVK 177 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLG 225 + + Y+ + + N + + ++R T F G Sbjct: 178 VVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTD 237 Query: 226 DKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 K + +SD++K+ + N W+ + Y+AS +IP + A Sbjct: 238 AKHFQKIDFSDLDKNKANFEKAADNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPAL 295 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y+ I PG+S LFAG +E + P E++ D+GW IAK Sbjct: 296 YRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAK 350 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + VGN+G AI+L TV +K +FFPL+ Y S A MK I P++ LRE+F Sbjct: 351 PLFWLLEKIHGFVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF- 409 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 +S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI D Sbjct: 410 KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHD 469 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I P++M++SMF+Q ++P P D QA ++ +MP Sbjct: 470 LSQRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMP 510 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 511 IAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 547 >gi|325127482|gb|EGC50411.1| inner membrane protein OxaA [Neisseria meningitidis N1568] Length = 545 Score = 319 bits (817), Expect = 8e-85, Method: Composition-based stats. Identities = 134/575 (23%), Positives = 234/575 (40%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q V + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQATQQQAVTASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y + P V L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRQLTLLQYKATGDEHKPFV--LFNDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + ++L + ++ + YL Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + + N S S RI+R + + + + + + +SD+ Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + + Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y S I G + L+AG + I + + ++ D+G ++ A Sbjct: 284 YSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ +DP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 458 LSRSDPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|189426685|ref|YP_001953862.1| hypothetical protein Glov_3642 [Geobacter lovleyi SZ] gi|254772788|sp|B3E3S0|OXAA_GEOLS RecName: Full=Inner membrane protein oxaA gi|189422944|gb|ACD97342.1| 60 kDa inner membrane insertion protein [Geobacter lovleyi SZ] Length = 530 Score = 319 bits (816), Expect = 9e-85, Method: Composition-based stats. Identities = 150/562 (26%), Positives = 249/562 (44%), Gaps = 40/562 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY---PRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME +A+ LS+ + Y + FY P ++ K P + A Sbjct: 1 ME--KRTILAVVLSIGVFYLFSFFYGPEKKPAPAAVSVPVKTENVGAAPAVSVQAAAIAP 58 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + V ++ + GA L L+G+ + V LL Sbjct: 59 VVVPK--IVSAADVTVETERYTAVFSGVGASLKSLTLKGFRETNKPGAAQVKLL---ANA 113 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 + + + + + + + +A + +T + D Sbjct: 114 DPALPSFSTRGVGFALSAQAAYSPNVSSLKLLSGEKKQLVFTYVDAQGFVVRKTYTFDGT 173 Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y + + NNS I + + + G E + + L + Sbjct: 174 GYGIALETQLVNNSAAPIAGAFQYLFTSPFDPPQKD--GRYETYGSSLYADGSLHTDAPK 231 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 S+ + + +W I+DKY+ S + + + K + G+ ++ S ++ Sbjct: 232 NVASATKKYDKGITWAAINDKYFLSALLSVNNSIASVELKKSAAGY--LESDISTPAFSV 289 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 PG+++T + LF G KE + E +D GWF IAKPM + +FY Sbjct: 290 APGQAVTVAHKLFIGPKEIDILKAQGSS-----LEQSLDLGWFSAIAKPMLYSLKFFYRY 344 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+GIAI++ TV +K+ FFPL K Y S M +QPK+ L+EK+K + +A++ Sbjct: 345 VGNYGIAIIIITVILKIFFFPLTHKSYKSMKEMGKLQPKMAALKEKYKNDKD-AMNRAVM 403 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY+ H +NPL GC P+++QIPVFFA+YK + S+E+RHAPF WI DL+ DP Sbjct: 404 ELYRDHKVNPLGGCLPMIVQIPVFFALYKALMYSIELRHAPFMFWITDLSDKDPFY---- 459 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 + P+IM ++MFIQ KM+P D+ Q I+ +PV+F F SFP+ Sbjct: 460 ---------------VTPVIMGVTMFIQQKMTPSNMDEMQQKIMLGLPVIFTFMFLSFPS 504 Query: 537 GLIIYWSWSNVISIVQQAVIMK 558 GL++YW +N+++I QQA I K Sbjct: 505 GLVLYWLINNILTIGQQAYINK 526 >gi|254468017|ref|ZP_05081423.1| inner membrane protein, 60 kDa [beta proteobacterium KB13] gi|207086827|gb|EDZ64110.1| inner membrane protein, 60 kDa [beta proteobacterium KB13] Length = 535 Score = 319 bits (816), Expect = 1e-84, Method: Composition-based stats. Identities = 145/558 (25%), Positives = 258/558 (46%), Gaps = 37/558 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + S ++ W ++ ++ + + + Y + I++ Sbjct: 1 METKRLILFVVFSFSLLLLWDSW-----QQKQLQTELAVNNAELSDLQPGDYDSSNIENP 55 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A L+ ++ +K IN G L L + + + +L+ Y Sbjct: 56 AYQLADDQKIVVKTSLYEAEINTVGGDIRKLKLANFQN--DNKDGLYEILNDEMNPLLYI 113 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 A+ + N+ + + + + ++F+N + + I +++Y K Sbjct: 114 AQSGLI--GKNLPTHKDVFKSDQLQYESNDQEVSVPIIFENEEVKVVKTYIFSNDNYQIK 171 Query: 182 IVDTVTNNSIDQIRFSPRGRIMR-HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 +V ++TN S ++ +++ HK + G + + DI+ Sbjct: 172 LVTSITNKSDAALQPQIYYQLLHDHKSAEKSGMMPTFTGVSYFTEASKFKKMDFDDIDNQ 231 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 + ++ W+GI +Y+AS +I + K L+DG A A + G Sbjct: 232 KPFTQNANDGWIGIIQRYFASAWIIPGNSPRQFYTKRLTDG--ISSAGVRAKLAMVEAGS 289 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 S ++ L++G + + P E +D+GW FIA P+F L+S LV N+ Sbjct: 290 SAEVSSVLYSGPQLKKQLIKAA-----PGMEYTVDYGWLTFIASPLFSLLSGIQKLVHNW 344 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G++I+L T+ +K+ F+PL+ Y S A +K + P++ ++EKF Q +Q+AM++LYK Sbjct: 345 GVSIILLTLVIKIFFYPLSASSYRSMAQLKEVAPRLQSMKEKFGDDK-QKMQQAMMELYK 403 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 T INPL GC PIL+QIPVF A+Y V+ ++E+R APF+GWI DL+ DP Sbjct: 404 TEKINPLGGCLPILIQIPVFIALYWVLLGAVELRQAPFFGWITDLSVKDPLY-------- 455 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 I PI+M+ SMF+Q K++P P D QA ++ MP++F FPAGL++ Sbjct: 456 -----------ILPILMAASMFLQQKLNPKPTDPTQARLMMMMPIIFSIFFFFFPAGLVL 504 Query: 541 YWSWSNVISIVQQAVIMK 558 YW +NV+S++QQ + K Sbjct: 505 YWFINNVLSMMQQWYVNK 522 >gi|304414291|ref|ZP_07395659.1| Preprotein translocase subunit YidC [Candidatus Regiella insecticola LSR1] gi|304283505|gb|EFL91901.1| Preprotein translocase subunit YidC [Candidatus Regiella insecticola LSR1] Length = 542 Score = 319 bits (816), Expect = 1e-84, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 246/572 (43%), Gaps = 59/572 (10%) Query: 1 MERNWNYFVAIAL--SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M N + L S +I WQ P + + S V + Sbjct: 1 MAPQRNLLLIALLFVSFMIWQTWQVDNNPPSSSQTAQQ---------------STDTVSM 45 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 ++ A + ++++ L +IN +G + NL Y + S+ P L + Sbjct: 46 ANQTAADTQKQLIKVQTDVLSLTINTRGGDIEQANLLAYPNVLGSDKPFELL--ETTPAF 103 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKI-----LTPTTPIKLVFKNANNILFERTIS 173 Y A+ N + I L F + ++F +T Sbjct: 104 IYQAQSGLTGKNGPDNPANGARPLFTATQDHFVLAENQDELRIPLTFTSQEGVIFTKTFV 163 Query: 174 LDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMR------HKPQTATNTFGVQEGFIAVLGD 226 L + + V N + FS G++ + ++ ++N A D Sbjct: 164 LKRNDYAIGVHYQVKNTFATPLEFSLFGQLKQSINLPQYRDTGSSNFALQTYRGAAYSSD 223 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 ++ ++ + + N W+ + +Y+A+ +IP+ + + F + Sbjct: 224 ETKYKKYSFSDIEETNLNTVTQGGWVAMLQQYFATAWIPAAQETHT--FYSNKLSNGLAA 281 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 F + + I PG+ L+ G + + ++ +D+GW +FI++P+ Sbjct: 282 IGFKSMPVVIPPGEQKDLAATLWIGPEIQDKMAAIAT-----HLDLTVDYGWLWFISQPL 336 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + +GN+G +I++ T V+ + +PL K QY S A M+ IQPK+ E+RE+ Sbjct: 337 FKLLHFIQGFIGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRMIQPKLTEMRERIGDD 396 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + + M+ LYKT +NPL GC P+L+Q+P+F A+Y ++ S+E+RHA F WI DL+ Sbjct: 397 K-QRMSQEMMALYKTEQVNPLGGCLPLLIQMPIFLALYYMLMSSVELRHASFILWIHDLS 455 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 A DP I PI+M ++M+ KMSP D Q I+ +MPV Sbjct: 456 AQDPYY-------------------ILPILMGITMYFIQKMSPTTITDPMQQKIMTFMPV 496 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +F FPAGL++Y+ SN+++I+QQ +I Sbjct: 497 IFTVFFLWFPAGLVLYYIVSNLVTILQQYLIY 528 >gi|82703889|ref|YP_413455.1| 60 kDa inner membrane insertion protein [Nitrosospira multiformis ATCC 25196] gi|123543756|sp|Q2Y5A8|OXAA_NITMU RecName: Full=Inner membrane protein oxaA gi|82411954|gb|ABB76063.1| protein translocase subunit yidC [Nitrosospira multiformis ATCC 25196] Length = 569 Score = 319 bits (816), Expect = 1e-84, Method: Composition-based stats. Identities = 147/584 (25%), Positives = 244/584 (41%), Gaps = 55/584 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ + + + + +++ W + + T Q N A + Sbjct: 1 MDTQR-FVLFLIFATSLLFLWDAWQKEQYPATQGPKTAVQGTETQANTGTAGTAETPVPG 59 Query: 61 RAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLNLRGYHL 99 A S+ R + +K ++ I+ G L L Sbjct: 60 DQLASSVPQRGSTAENGAPVRAAGKLESGDKITIKTDMVLAEIDTAGGDIRRLELLHQPS 119 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 N P L S+ + Y A+ + I+L Sbjct: 120 KEDKNKPFALL--ESDPERVYIAQSGLIGEGLPTHKTRFTAEPGAYELAAGQDKIQIRLS 177 Query: 160 FKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG--V 216 + + + + YL + V N I+ +++R + F Sbjct: 178 APEVDGVQVTKIYTFHRGSYLIDVSFEVANQRNAAIQPFSYFQMLRDSRPPVGSFFMVPT 237 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQF 275 G ++ + ++S ++K + S N W+ + +Y+ + ++P + Sbjct: 238 YTGAALYTEEEKFRKIEFSALDKGNASYPKNADNGWIAMLQQYFLAAWLPKDKLPREYYA 297 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 K L G Y A I PG S T T L+AG +E + P ++++D Sbjct: 298 KRL--GENEYTAGVIVPVGQIEPGSSATVTVPLYAGPEEQSKLASIA-----PGLDLVVD 350 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +GW I P+F L+S F++ GN+G+AI+L T+ VKL FFPL+ Y S A ++ + PK Sbjct: 351 YGWLTVIGAPLFWLLSLFHSWTGNWGVAIILLTMSVKLAFFPLSAAGYRSMAKLRLVTPK 410 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + LRE+ Q + +AM+ YKT INP+ GC PIL+QIPVF ++Y V+ S+E+R+ Sbjct: 411 LQRLREQHGN-DRQRMHQAMMDFYKTEKINPMGGCLPILVQIPVFISLYWVLLSSVELRY 469 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 A F WI+DL+A DP + P+IM +SMF+Q ++SPP D Sbjct: 470 ASFALWIEDLSAPDPYY-------------------VLPVIMGISMFLQQRLSPPATDPI 510 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 QA ++ MP+ F FPAGL++Y +NV+SI QQ I +M Sbjct: 511 QARVMQIMPLAFSVFFFFFPAGLVLYSLVNNVLSIAQQWQITRM 554 >gi|291615449|ref|YP_003525606.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Sideroxydans lithotrophicus ES-1] gi|291585561|gb|ADE13219.1| membrane protein insertase, YidC/Oxa1 family domain containing protein [Sideroxydans lithotrophicus ES-1] Length = 545 Score = 319 bits (816), Expect = 1e-84, Method: Composition-based stats. Identities = 142/567 (25%), Positives = 246/567 (43%), Gaps = 36/567 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 F+ + S +V W + P + + + +V + + Sbjct: 1 MDLRRLFLFLTFSFSLVLLWSAWTRQNEPSAQAESAVIQKDPSVPLEPARVSEQQVMSSS 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 AQ S ++++ IN G L+L + + + P+ + Sbjct: 61 LEAQKTSAGKKIDVTTDIFKVVINTTGGNIQHLDLLKHKDAIDKSKPLTLM--QQQGDRI 118 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178 Y A+ + + + ++L +++ + + Y Sbjct: 119 YIAQSGLLGKGLPTHNAEFSVTGDQFHLSEGKDDLEVRLTALDSDEARVTKVYTFHRGSY 178 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ--TATNTFGVQEGFIAVLGDKSLVEQKYSD 236 L + + N S + S +++R A+ G + + ++SD Sbjct: 179 LIDVTYEIENKSQSALLPSAYFQLVRDSTPVAGASRFVPTFTGPAIYTEQEKFRKIQFSD 238 Query: 237 IEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 IEK+ + N W+G+ Y+ S ++P + K L + A Sbjct: 239 IEKNKAKLPLNPDNGWIGMLQHYFVSAWLPEAKGKREFYAKKLDGNE--FSAGVILPVAK 296 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I PG++ + L+AG + D P + +D+GW IA P+F L+S+ Sbjct: 297 IEPGQTGKISAELYAGPAQSKL------DKIAPGLGLTVDYGWLTIIATPLFWLLSHIDE 350 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 + N+G++I+L TV +KL FFPL+ Y S A M+ + PK++++++++ ++ AM Sbjct: 351 WIHNWGVSIILLTVLIKLAFFPLSAASYRSMAKMRLVAPKLEKIKQQYSDDREKLNH-AM 409 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LYKT INPL GC P+++QIPVF A+Y I S+E+RHAPF+GWI DL+AADP Sbjct: 410 MDLYKTEKINPLGGCLPMIIQIPVFIALYWAILSSVELRHAPFFGWITDLSAADPYY--- 466 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 + P+IM LSM +Q K++P P D QA ++ MP+VF FP Sbjct: 467 ----------------VLPLIMGLSMLVQSKLNPVPPDPMQAKLMQIMPIVFSVVFFFFP 510 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGA 562 AGL++Y +N++SI QQ I + A Sbjct: 511 AGLVLYSVVNNILSIAQQWYITRGTKA 537 >gi|261363929|ref|ZP_05976812.1| membrane protein insertase, YidC/Oxa1 family [Neisseria mucosa ATCC 25996] gi|288567942|gb|EFC89502.1| membrane protein insertase, YidC/Oxa1 family [Neisseria mucosa ATCC 25996] Length = 547 Score = 319 bits (816), Expect = 1e-84, Method: Composition-based stats. Identities = 138/575 (24%), Positives = 241/575 (41%), Gaps = 56/575 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A+S+ I W++F+ P+ Sbjct: 1 MDF-KRLVAFFAISLAIFAGWEHFFPSPKP------------NPAQQAAQQQQQTAATAA 47 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AL+ + + + ++ I+ K + L Y + N TL + S Y Sbjct: 48 AEAALAPATPITVTTDTVKAVIDEKSGDLRQMTLLKYKANGDENKAF-TLFNDSKEY-TY 105 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L N + ++L N + ++ + + YL Sbjct: 106 VAQSELLDAQGNNILKGVNFTAAQKEYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYL 165 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + +TN+S + S RI+R + + + + + +SD+ Sbjct: 166 VNVRFDITNSSGKPVNLSADYRIVRDHSEPEGQGYFTHSYLGPVVYTPEDKFQKVSFSDL 225 Query: 238 EKSSISNFHE-------SNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S +E WLG+ + ++ S +I + + Sbjct: 226 DDDAKSGKNEAEYARKTQTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDNL 285 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y S I G + L+AG + I + + ++ D+G ++ A Sbjct: 286 YSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 340 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 341 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 400 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 401 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 459 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ +DP I P+IM+++MF Q ++PPP D QA ++ MP Sbjct: 460 LSRSDPYY-------------------ILPVIMAVTMFAQTFLNPPPTDPMQAKMMKVMP 500 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 501 LVFSAMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 535 >gi|115353266|ref|YP_775105.1| putative inner membrane protein translocase component YidC [Burkholderia ambifaria AMMD] gi|122321904|sp|Q0BAQ2|OXAA_BURCM RecName: Full=Inner membrane protein oxaA gi|115283254|gb|ABI88771.1| protein translocase subunit yidC [Burkholderia ambifaria AMMD] Length = 554 Score = 319 bits (816), Expect = 1e-84, Method: Composition-based stats. Identities = 145/577 (25%), Positives = 240/577 (41%), Gaps = 46/577 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVD-------- 50 M+ I ++ WQ + P + + + + Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGTGATTTTAGE 60 Query: 51 -NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + AA + + V+ G I+ +G L L+ P + Sbjct: 61 VPAAAAGTAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLY 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNI 166 + +T + + + + T N + +KL F+ Sbjct: 118 ITLFDHTAGHTYLARTGLLGGDFPNHNDVYTQVNAGPTSLTGDQNALKLSFESPVKGGVK 177 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLG 225 + + Y+ + + N + + ++R T F G Sbjct: 178 VVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTD 237 Query: 226 DKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 K + +SD++K+ + N W+ + Y+AS +IP + A Sbjct: 238 AKHFQKIDFSDLDKNKANFEKAADNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPAL 295 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y+ I PG+S LFAG +E + P E++ D+GW IAK Sbjct: 296 YRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAK 350 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + VGN+G AI+L TV +K +FFPL+ Y S A MK I P++ LRE+F Sbjct: 351 PLFWLLEKIHGFVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF- 409 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 +S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI D Sbjct: 410 KSDPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHD 469 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I P++M++SMF+Q ++P P D QA ++ +MP Sbjct: 470 LSQRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMP 510 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 511 IAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 547 >gi|15677738|ref|NP_274901.1| putative inner membrane protein translocase component YidC [Neisseria meningitidis MC58] gi|121634185|ref|YP_974430.1| putative inner membrane protein translocase component YidC [Neisseria meningitidis FAM18] gi|38503191|sp|Q9JXS4|OXAA_NEIMB RecName: Full=Inner membrane protein oxaA gi|166975876|sp|A1KRZ8|OXAA_NEIMF RecName: Full=Inner membrane protein oxaA gi|7227164|gb|AAF42237.1| 60 kd inner-membrane protein [Neisseria meningitidis MC58] gi|120865891|emb|CAM09627.1| putative integral membrane protein [Neisseria meningitidis FAM18] gi|316985524|gb|EFV64471.1| 60Kd inner membrane family protein [Neisseria meningitidis H44/76] gi|325131545|gb|EGC54252.1| inner membrane protein OxaA [Neisseria meningitidis M6190] gi|325133546|gb|EGC56209.1| inner membrane protein OxaA [Neisseria meningitidis M13399] gi|325139200|gb|EGC61746.1| inner membrane protein OxaA [Neisseria meningitidis ES14902] gi|325141536|gb|EGC64005.1| inner membrane protein OxaA [Neisseria meningitidis 961-5945] gi|325143618|gb|EGC65937.1| inner membrane protein OxaA [Neisseria meningitidis M01-240013] gi|325197597|gb|ADY93053.1| inner membrane protein OxaA [Neisseria meningitidis G2136] gi|325200959|gb|ADY96414.1| inner membrane protein OxaA [Neisseria meningitidis H44/76] gi|325206814|gb|ADZ02267.1| inner membrane protein OxaA [Neisseria meningitidis M04-240196] Length = 545 Score = 319 bits (816), Expect = 1e-84, Method: Composition-based stats. Identities = 134/575 (23%), Positives = 232/575 (40%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q V + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y N P + L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFI--LFGDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + ++L + ++ + YL Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + + N S S RI+R + + + + + + +SD+ Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGRQSVCAAGECNIDIKRRNDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y S I G + L+AG + I + + ++ D+G ++ A Sbjct: 284 YSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|171316349|ref|ZP_02905569.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria MEX-5] gi|171098478|gb|EDT43280.1| 60 kDa inner membrane insertion protein [Burkholderia ambifaria MEX-5] Length = 554 Score = 319 bits (816), Expect = 1e-84, Method: Composition-based stats. Identities = 144/577 (24%), Positives = 240/577 (41%), Gaps = 46/577 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVD-------- 50 M+ I ++ WQ + P + + + + Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGTGATTTTAGE 60 Query: 51 -NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + AA + + V+ G I+ +G L L+ P + Sbjct: 61 VPAAAAGTAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLY 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNI 166 + +T + + + + T N + +KL F+ Sbjct: 118 ITLFDHTAGHTYLARTGLLGGDFPNHNDVYTQVNAGPTSLTGDQNALKLSFESPVKGGVK 177 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLG 225 + + Y+ + + N + + ++R T F G Sbjct: 178 VVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTD 237 Query: 226 DKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 K + +SD++K+ + N W+ + Y+AS +IP + Sbjct: 238 AKHFQKIDFSDLDKNKANFEKAADNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPTL 295 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y+ I PG+S LFAG +E + P E++ D+GW IAK Sbjct: 296 YRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAK 350 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ ++ VGN+G AI+L TV +K +FFPL+ Y S A MK I P++ LRE+F Sbjct: 351 PLFWLLEKIHSYVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF- 409 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 +S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI D Sbjct: 410 KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHD 469 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I P++M++SMF+Q ++P P D QA ++ +MP Sbjct: 470 LSQRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMP 510 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 511 IAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 547 >gi|94501616|ref|ZP_01308133.1| putative inner membrane protein translocase component YidC [Oceanobacter sp. RED65] gi|94426299|gb|EAT11290.1| putative inner membrane protein translocase component YidC [Oceanobacter sp. RED65] Length = 538 Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats. Identities = 143/563 (25%), Positives = 242/563 (42%), Gaps = 45/563 (7%) Query: 16 IIVYAWQNFY---VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI------DDRAQALS 66 ++V W Y E + +Q V P ++ + + + Q + Sbjct: 1 MLVLQWNEDYGKRPTQVAEPITRLTSPVQEVDIPTDTSDADSDAPVVQDNMDAPQTQTQA 60 Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 + ++++ L I+ G L+ Y L V LL SN Y A+ Sbjct: 61 TTEWIKVETDVLDIRIDPVGGDIVYAALKQYPLSVDQQDVPFVLLEQSNI-RTYIAQSGL 119 Query: 127 VSTANNIELPNSNTVWNLISGK--ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 V + + + L N + + YL + Sbjct: 120 VGKNGIDKKGRAQYSVEKTEYNLADGQDQIQVVLATTQNNVKIEKVFTINRGEYLIDVGF 179 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNT----FGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + N S + + + + R + ++ G + + + DIE+ Sbjct: 180 RIDNQSQEPWQANFYAQFKRDRSVDPSSMESMGMASFLGAAVTRPSERYFKMDFDDIEED 239 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 W+ Y+ ++PSK+ + + Y + + + + PG Sbjct: 240 PFKE-KIEGGWIAFLQHYFLGAWVPSKDEAHVYNTR---KASGHYLVGYYDSALQVEPGT 295 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 T+ L+ G K+ + + ++ ID+GW +++A+P+F L+ +++ GN+ Sbjct: 296 QGGTSTQLYLGPKDQDRLAEIAE-----HLDLTIDYGWLWWVAQPLFWLLQLMHDIAGNW 350 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI++ T+ VKL FFPL+ Y S ANM+ + PK+ ++E++ + Q L K M+ LYK Sbjct: 351 GWAIIMLTILVKLAFFPLSAASYRSMANMRRVAPKLTAIKEQYADNREQ-LSKEMMNLYK 409 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 INPL GC PIL+Q+PVF A+Y V+ S+E+R APF WI+DL+ DP Sbjct: 410 KEKINPLGGCLPILVQMPVFIALYWVLMESVELRQAPFMLWIEDLSLKDPYF-------- 461 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 I P+IM SMF+QM+++P P D QA ++ MPVVF FPAGL++ Sbjct: 462 -----------ILPLIMGASMFVQMQLNPTPPDPMQAKVMKLMPVVFTVFFLFFPAGLVL 510 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW +N++SI QQ I + AE Sbjct: 511 YWVVNNLLSIAQQYYITRKIEAE 533 >gi|330818731|ref|YP_004362436.1| Putative inner membrane protein translocase component YidC [Burkholderia gladioli BSR3] gi|327371124|gb|AEA62480.1| Putative inner membrane protein translocase component YidC [Burkholderia gladioli BSR3] Length = 553 Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats. Identities = 146/579 (25%), Positives = 246/579 (42%), Gaps = 46/579 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEE--MNNERKNIQTVKQPNQV 49 M+ I ++ WQ F+ + + + + Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRAHGRQSMFFPNVTQTTGASSTDASSGASAAGGAPA 60 Query: 50 DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 A+ D ++ + V+ G I+ +G L L+ + P + Sbjct: 61 ALPAASTTAPDSTAPIAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---EGDGKQPDLF 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNI 166 + +TK+ + V+ N + T + +KL F+ Sbjct: 118 VTLFDHTKDHTYLARTGVTGGNFPNHNDLYTPAAGNPSALAAGQDSMKLSFESQEKGGVK 177 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLG 225 + + Y+ + + N + + I+R T F G Sbjct: 178 VVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMEIVRDSTPVETPLFSHTFLGPAVYTD 237 Query: 226 DKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 K + +SDI+K+ N W+ + Y+AS +IP + + Sbjct: 238 QKHFQKITFSDIDKNKAEYISSADNGWVAMVQHYFASAWIPQQG--VKRDIYVEKIDPSL 295 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y+ TI PG+S + LFAG +E + P +++ D+GW IAK Sbjct: 296 YRVGVKEQVKTIEPGQSADVSARLFAGPEEERVLEGIA-----PGLDLVKDYGWVTIIAK 350 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + VGN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+F Sbjct: 351 PLFWLLQKIHGYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF- 409 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 +S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI D Sbjct: 410 KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHD 469 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I P++M+ SMF+Q +++P P D QA ++ +MP Sbjct: 470 LSQRDPFF-------------------ILPVLMAGSMFLQTRLNPTPPDPVQAKMMMFMP 510 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + F FPAGL++Y+ +NV+SI QQ I + G + Sbjct: 511 IAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTIGKK 549 >gi|294789683|ref|ZP_06754916.1| inner membrane protein OxaA [Simonsiella muelleri ATCC 29453] gi|294482395|gb|EFG30089.1| inner membrane protein OxaA [Simonsiella muelleri ATCC 29453] Length = 555 Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats. Identities = 133/575 (23%), Positives = 247/575 (42%), Gaps = 62/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A+ LS+ I+ WQ+F+ P+ + + + + Sbjct: 1 MDF-KRMLWAMILSLAIMMTWQHFFPTPQPNQP------------------TKSPIATTH 41 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ALS + + ++ ++ I+ K L L Y V L ++ Y Sbjct: 42 PIAALSETSPITVQTDTVQAVIDEKSGDLRGLTLLKYDATEDKTKNFV--LFDDKPQHTY 99 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + N L N S + + L N + + + YL Sbjct: 100 IAQSQLIDANGNNLLKNVTFTAAQKSYMLNGDKVEVHLTAPMQNGLQISKIYTFTQGSYL 159 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE--GFIAVLGDKSLVEQKYSDI 237 + V N S + + F + + +SD+ Sbjct: 160 VNVRFDVQNQGAATKLGSNYAIVRDNHTPEGQGFFMHSYTGPVVYTPDADEFQKVTFSDL 219 Query: 238 EKS-------SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + + + G+ Y+A+ ++ + + + + + + Q+ Sbjct: 220 DDDFKTGKDTAEYQRKATGGYAGMIQHYFAATWLAQTHDTGSNICETGCNINIKKQSDTL 279 Query: 291 ANEITILP------GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + + P G + + + L+AG + ++ P+ ++L D+G + A Sbjct: 280 YSVVLNTPMKDVAAGSTQSFSANLYAGPQTTSILNKVA-----PKLDLLKDYGRVHIFAA 334 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N +GN+G AI+ T+ VK + FPL +K Y S A M+ + PK++ L++++ Sbjct: 335 PLFWLLNKLHNFIGNWGWAIIFLTLIVKAVLFPLNQKAYKSMAKMRTVAPKMEALKKQYA 394 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 +Q+AMI+LYK INPL GC P+L+Q+P+F +Y +I +S+E+R AP+ GWI D Sbjct: 395 N-DQMGMQQAMIKLYKDEQINPLGGCLPMLIQMPIFIGLYWMIFLSVELRQAPWLGWITD 453 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PI+M+ +M+ Q K+SPPP+D QA ++ MP Sbjct: 454 LSRADPFY-------------------ILPILMAATMWFQTKLSPPPSDPMQAQMMKIMP 494 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++F FPAGL++Y+ +N+++I QQ I + Sbjct: 495 LMFSIMFFFFPAGLVLYYVVNNLLTIAQQWYINRS 529 >gi|255066611|ref|ZP_05318466.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sicca ATCC 29256] gi|255049195|gb|EET44659.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sicca ATCC 29256] Length = 548 Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats. Identities = 140/578 (24%), Positives = 244/578 (42%), Gaps = 55/578 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ + A+S+ I W++F+ P+ Q Sbjct: 1 MDF-KRFIAFFAISLAIYAGWEHFFPSPKP-----------NPAQQAAQQQQQQTATTAA 48 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AL+ + + + ++ I+ K + L Y + N P TL + S Y Sbjct: 49 AEAALAPATPITVTTDTVKAVIDEKSGDLRQMTLLKYKANGDENKPF-TLFNDSKEY-TY 106 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L N + ++L N + ++ + + YL Sbjct: 107 VAQSELLDAQGNNILKGVNFTAAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYL 166 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237 + +TN S S RI+R + + + G + + + +SD+ Sbjct: 167 VNVRFDITNTSGKPANLSADYRIVRDRSEPEGQGYFTRSFVGPVVYTPEGKFQKVNFSDL 226 Query: 238 EKSSISNFHE-------SNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S +E WLG+ + ++ S +I + + Sbjct: 227 DDDAKSGKNEAEYARKTQTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDNL 286 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y S I G + L+AG + I + + ++ D+G ++ A Sbjct: 287 YSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 341 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 342 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 401 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 402 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 460 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ +DP I P+IM+++MF Q ++PPP D QA ++ MP Sbjct: 461 LSRSDPYY-------------------ILPVIMAVTMFAQTFLNPPPTDPMQAKMMKVMP 501 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++F FPAGL++YW +N+++I QQ I + Sbjct: 502 LIFSAMFFFFPAGLVLYWVVNNLLTIAQQWHINRSIDK 539 >gi|58698973|ref|ZP_00373828.1| 60 kd inner-membrane protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58534513|gb|EAL58657.1| 60 kd inner-membrane protein [Wolbachia endosymbiont of Drosophila ananassae] Length = 549 Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats. Identities = 206/528 (39%), Positives = 318/528 (60%), Gaps = 15/528 (2%) Query: 36 ERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM--SPRVELKNPSLIGSINLKGAQFDDLN 93 Q + + + N A ++ +R++ ++ RV L N + GSI+LKGA+FDDL Sbjct: 13 STNQNQPLIEHIESFNDLAPIIHQNRSEIINSTREQRVSLTNNMIKGSISLKGARFDDLI 72 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L YHL+ SS+SP V LLSP+ +K+ YFAE ++ +N I++P+S VW Sbjct: 73 LTNYHLEPSSSSPQVVLLSPAESKDVYFAEFGWLDPSNKIKVPDSKAVWRADKLN----Q 128 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 + L + N N ILF I+LD++Y+FK+ V NN+ D + P G+I R + + Sbjct: 129 KEVNLSWDNENGILFRMKINLDDNYMFKVEQVVENNTKDNVVLVPYGKINRKRDNINESY 188 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + EG + + L E Y DI K I +W G +DKYW +V IP K + Sbjct: 189 WISHEGVLGAFDN-KLEEWTYKDISKKHLIKANTSEKNWFGFADKYWLTVIIPEKSDKIN 247 Query: 273 SQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 K+ + + ++Q F + +ILPG S + N+ FAGAK+ + Y+ L IP F+ Sbjct: 248 VSIKHTNANDIDKFQVDFVKSYKSILPGASTSNVNYFFAGAKKLNLLDSYKDTLNIPLFD 307 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+G YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + YVS +K+ Sbjct: 308 KAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKVKS 367 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ ++E +K + K I L+K +N+NP++ +P+L+QIPVFFA+YKV+ +++ Sbjct: 368 LQPELTRVKELYKNDSLK-QHKETIALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTI 426 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS--- 508 EMRHAPF+ WIKDL+A DPTNIFTLFG+ + P + +GI PII +M IQ K+S Sbjct: 427 EMRHAPFFLWIKDLSAPDPTNIFTLFGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKD 484 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 D Q ++ ++P + VF SSFPAGL+IYW +SN+I+++QQ++I Sbjct: 485 QTSKDDIQVNVMKFLPYISVFIFSSFPAGLVIYWIFSNIITLIQQSLI 532 >gi|237809901|ref|YP_002894341.1| 60 kDa inner membrane insertion protein [Tolumonas auensis DSM 9187] gi|259515732|sp|C4LDZ4|OXAA_TOLAT RecName: Full=Inner membrane protein oxaA gi|237502162|gb|ACQ94755.1| 60 kDa inner membrane insertion protein [Tolumonas auensis DSM 9187] Length = 549 Score = 318 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 132/579 (22%), Positives = 235/579 (40%), Gaps = 53/579 (9%) Query: 1 MERNWNYFVAIA--LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + +S ++ +W K + V S + Sbjct: 1 MQPQRNLLLIGLLLVSFMLWQSWMVDKAP----------KTATPATAESSVPASSGGDVP 50 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + + L++ L +++ G + L S+ P V L + Sbjct: 51 NQNDASNAKHALLTLRSDVLELTVDTLGGDIVEAKLLKQTEAQGSDKPFVLL--EKKPQR 108 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGK---ILTPTTPIKLVFKNANNILFERTISLD 175 Y A+ + + + + F +A +F + L Sbjct: 109 QYIAQSGLIGRDGVDNQAERPVYTANGTEFALVEGKDELVVPMTFTDAKGNVFTKRFVLK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 E Y + V N S + G++ + ++ S EQ+Y Sbjct: 169 RESYAVGVDYQVKNVSAQPLEIQFYGQLKQTIAAPEGSSTPGMMASAFHGAAYSSAEQRY 228 Query: 235 SDIEKSSISNFH----ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY----- 285 + S I W G+ Y+ + + + H K +S Sbjct: 229 EKVNFSDIGETKLDVATQAGWAGMLQHYFVTAWTGKADAQNHIYGKAVSVNADVKDSGEA 288 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 TI L+ G K + + ++ +D+G+ +FIA+P Sbjct: 289 IIGIKLPLTTIAANSEAVVGTSLWIGPKLQDQMAAVAQ-----HLDLTVDYGYLWFIAQP 343 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + + LVGN+G+AI+L T+ V+ + +PL+K QY S A M+ +QPK+ LRE+ Sbjct: 344 LFQLLQFLHGLVGNWGVAIILITMIVRGVMYPLSKAQYTSMAKMRLLQPKLTALRERLGD 403 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + +AM++LYK +NPL GC+P+L+Q+P+F A+Y + S+E+RHAPF W+ DL Sbjct: 404 -DRQKMSQAMMELYKEEKVNPLGGCFPLLIQMPIFIALYWTLMESVELRHAPFALWLTDL 462 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 + DP + P++M +M+ KMSP D Q ++ +MP Sbjct: 463 SVKDPYY-------------------VLPLLMGATMWYIQKMSPTTVTDPMQQKVMQFMP 503 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +VF F FP+GL +YW SN+++I+QQ +I + + Sbjct: 504 IVFTFMFLWFPSGLTLYWVVSNIVTIIQQTLIFRQLEKK 542 >gi|261393238|emb|CAX50861.1| inner-membrane protein OxaA [Neisseria meningitidis 8013] Length = 545 Score = 318 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 135/575 (23%), Positives = 232/575 (40%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q V + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y N P + L + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRQLTLLKYKATGDENKPFI--LFGDGKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + ++L + ++ + YL Sbjct: 104 VAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKGSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 + + N S S RI+R + + + + + + +SD+ Sbjct: 164 VNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKVSFSDL 223 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + Sbjct: 224 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGECSIDIKRRNDKL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A S I G T L+AG + I + + ++ D+G ++ A Sbjct: 284 YSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRVAAPKLQAIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLY INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PIIM+ +M Q ++PPP D QA ++ MP Sbjct: 458 LSRADPYY-------------------ILPIIMAATMVAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|241759451|ref|ZP_04757555.1| inner membrane protein, 60 kDa [Neisseria flavescens SK114] gi|241320233|gb|EER56566.1| inner membrane protein, 60 kDa [Neisseria flavescens SK114] Length = 548 Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 144/575 (25%), Positives = 242/575 (42%), Gaps = 55/575 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A+SV I W++F+ P+ Q + AA Sbjct: 1 MDF-KRLMAFFAISVAIFAGWEHFFPSPKP-----------NPAQQAAQQQTAAAPAKAA 48 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AL+ + + + ++ I+ K L L Y + P V L + Y Sbjct: 49 AEAALAPASPITVTTDTVKAVIDEKSGDLRQLTLLQYKATGDEHKPFV--LFNDGKEYTY 106 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + + ++L N + ++ + YL Sbjct: 107 VAQSELLDAQGNNVLKGISFTAPQKQYSLEGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 166 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237 I +TN++ + S RI+R + + G + + + +SD+ Sbjct: 167 VNIRFDITNSNGQPVNLSADYRIVRDNSEPEGQGYFTRSYVGPVVYTPEGGFQKVSFSDL 226 Query: 238 EKSSIS-------NFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S WLG+ + ++ S +I + Sbjct: 227 DDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKDGQSVCSAGECNIDIKRRNDNL 286 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A S TI G T L+AG + I + + ++ D+G ++ A Sbjct: 287 YSASVSVPLATIQAGTKAETAINLYAGPQATSVIANIAD-----KLQLAKDYGKVHWFAS 341 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 342 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 401 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 V Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 402 D-DRMVQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 460 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I P+IM+++MF Q ++PP D QA ++ MP Sbjct: 461 LSRPDPFY-------------------ILPLIMAVTMFAQTYLNPPSTDPMQAKMMKIMP 501 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 502 LVFSIMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 536 >gi|71281074|ref|YP_271688.1| inner membrane protein, 60 kDa [Colwellia psychrerythraea 34H] gi|71146814|gb|AAZ27287.1| inner membrane protein, 60 kDa [Colwellia psychrerythraea 34H] Length = 543 Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 133/561 (23%), Positives = 249/561 (44%), Gaps = 36/561 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV-DNSYAAVLID 59 ME + IAL V+ + + + Q+V+ + + + Sbjct: 1 MESQR-SLLFIALMVVTYLLFSQWQQQNAVVPEQTSISQNQSVENADADFVPESSDAQVS 59 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + + + +LI IN +G + LR + + ++ P L N Sbjct: 60 SIKSTNTSAKLITVTTDTLILKINSQGGDIVEAKLRKFDTEQGNDIPFTIL---QNGNQK 116 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKIL--TPTTPIKLVFKNANNILFERTISLDEH 177 Y A+ ++ + LVF + + + + + +++ Sbjct: 117 YIAQSGLTGANGIDRTIKGRPIYTSAKNSYELVNDNLIVDLVFHDVSGMSVTKRFTFNKN 176 Query: 178 -YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 Y + + NN+ + + G++ + A + E+ D Sbjct: 177 SYSVNVDYLIDNNTANSVSVQMYGQLKQSTVVETGGGMLPTYRGAAYSTTEERYEKYDFD 236 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + + N + W+ + + Y+ S ++P+ + S Y ++ A F A + I Sbjct: 237 DIEEANLNAVTAGGWIAMLEHYFVSAWVPNAKDSNQLYTTYSNNFEAV--IGFKAPAVII 294 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 GK +T+ +AG K+ + P ++ ID+G+ + I++P+F L+ + Sbjct: 295 DAGKQGSTSAIFYAGPKDQEVLEKIA-----PNLDLTIDYGFLWMISQPLFWLLLTIQSF 349 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 V N+G+AI++ T+ VK +PL K QY S A M+++ PK+ +L+E+F Q + +A + Sbjct: 350 VTNWGVAIIIITLIVKGGMYPLTKAQYTSMAKMRDLAPKMAQLKERFGD-DRQKMSQATM 408 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 ++Y+ +NP GC P++LQ+P+F A+Y V S+E+RHAPF WI+DL+A DP Sbjct: 409 EMYRKEKVNPAGGCLPLILQMPIFLALYWVFLESVELRHAPFVFWIQDLSAMDPFF---- 464 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 + P++M +SM++ KM P D Q I+ +MPVVF ++ FP Sbjct: 465 ---------------VLPVLMGISMYVMQKMQPMTIQDPMQQKIMQYMPVVFSIFMAWFP 509 Query: 536 AGLIIYWSWSNVISIVQQAVI 556 +GL++YW SN+ISI Q +I Sbjct: 510 SGLVLYWLVSNLISITQMKII 530 >gi|114332119|ref|YP_748341.1| 60 kDa inner membrane insertion protein [Nitrosomonas eutropha C91] gi|122313199|sp|Q0AE56|OXAA_NITEC RecName: Full=Inner membrane protein oxaA gi|114309133|gb|ABI60376.1| protein translocase subunit yidC [Nitrosomonas eutropha C91] Length = 622 Score = 317 bits (811), Expect = 4e-84, Method: Composition-based stats. Identities = 152/592 (25%), Positives = 257/592 (43%), Gaps = 56/592 (9%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFY-------VYPRIEEMNNERKNIQTVKQPNQVD---- 50 N + I S +++ W + P + N + K + + Sbjct: 1 MDNKKIVLLIIFSTSLLFLWDAWVKEQEKFNAPPSVVAQANSAAGVTQSKNNDGLPIPGS 60 Query: 51 --------------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 S + L ++ + +I I+ G L L Sbjct: 61 ELTASQTGSDLNGIPSSGDTADSVTPRLLPSGEQIRVVTDKVIAEIDTMGGDLRRLELLQ 120 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 N P L S ++ + L N+ + + I Sbjct: 121 QPSPEDENVPYSLLHSEASRTYVAQSGLVGEGLPNHKTVYQVESGIRNYELTAGEDKVVI 180 Query: 157 KLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNT 213 +L+ + +T + + Y+ I + N S IR +++R P T Sbjct: 181 RLLAPETQGVQVIKTYTFHRDSYVIDIGFEIANKSDATIRPFAYFQMLRDDTPPPAHTMM 240 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFH 272 G ++ + + D++K + +N W+ + + Y+ + ++P ++T Sbjct: 241 IRSFLGAAVYTDEEKYQKIPFDDLDKGKTDYPANANNGWIAMLEHYFLTAWLPPQQTPRE 300 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 K SD Y A I G+++TTT L+AG +E + P E+ Sbjct: 301 YFAKRQSDN--LYTAGVIVPAGVITAGETVTTTMPLYAGPEEQDRLAELA-----PGLEL 353 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +D+GW IAKP+F L+S++++ GN+GIAI+L T+ VKLLFFPL+ Y S A ++ + Sbjct: 354 TVDYGWLTMIAKPLFRLLSFYHSWTGNWGIAIILLTITVKLLFFPLSAAGYRSMAKLRLV 413 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PK+ +++++K Q + +AM+ YKT INP+ GC+PIL+QIPVF A+Y I ++E Sbjct: 414 TPKLKRIQDQYKG-DRQRMHQAMMDFYKTEKINPMGGCFPILVQIPVFIALYWTILAAVE 472 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +R+APF WI DL++ DP + P+++ +SMFIQ +++P P Sbjct: 473 LRYAPFALWITDLSSPDPKY-------------------LLPVLLGISMFIQTRLNPTPT 513 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 D QA I+ MPV F FPAGL++Y +N++SI QQ I KM+G Sbjct: 514 DPIQAKIMQIMPVAFSAIFFFFPAGLVLYSLVNNILSIAQQWKITKMYGTAP 565 >gi|297520055|ref|ZP_06938441.1| putative inner membrane protein translocase component YidC [Escherichia coli OP50] Length = 517 Score = 317 bits (811), Expect = 4e-84, Method: Composition-based stats. Identities = 129/517 (24%), Positives = 233/517 (45%), Gaps = 43/517 (8%) Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 D A + +K L +IN +G + L Y +++S P L ++ Sbjct: 15 SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETS 72 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFER 170 + Y A+ N + + + + +A F + Sbjct: 73 PQFIYQAQSGLTGRDGPDNPANGPRPMYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTK 132 Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVL 224 T L Y + V N + S G++ + T ++ F + A Sbjct: 133 TFVLKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAY 192 Query: 225 GDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 193 STPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGN 250 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 + + + + PG++ + L+ G + + P ++ +D+GW +FI Sbjct: 251 GIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFI 305 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 ++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 306 SQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRER 365 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 Q + + M+ LYK +NPL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI Sbjct: 366 LGDDK-QRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWI 424 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521 DL+A DP I PI+M ++MF KMSP D Q I+ Sbjct: 425 HDLSAQDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMT 465 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 466 FMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 502 >gi|238765480|ref|ZP_04626399.1| Inner membrane protein oxaA [Yersinia kristensenii ATCC 33638] gi|332163525|ref|YP_004300102.1| putative inner membrane protein translocase component YidC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|238696304|gb|EEP89102.1| Inner membrane protein oxaA [Yersinia kristensenii ATCC 33638] gi|318608031|emb|CBY29529.1| inner membrane protein translocase component YidC, long form [Yersinia enterocolitica subsp. palearctica Y11] gi|325667755|gb|ADZ44399.1| putative inner membrane protein translocase component YidC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 531 Score = 317 bits (811), Expect = 4e-84, Method: Composition-based stats. Identities = 136/556 (24%), Positives = 236/556 (42%), Gaps = 54/556 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AWQ + + N T + +Q + +K Sbjct: 1 MIWQAWQVDNNPQPAAQTTQQTANTATGDKASQAVPGS------------GQGQLITVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 L +IN +G + NL Y + S+ L + Y A+ + Sbjct: 49 DVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFIYQAQSGLTGKSGPDNP 106 Query: 136 PNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL-FKIVDTVTNN 189 N + I L F + +F +T L + + V N Sbjct: 107 ANGERPLFEVPQTSFVLADGQDELRIPLTFTGKDGSVFTKTFVLKRNDYAIGVDYHVKNA 166 Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQKY-SDIEKSSIS 243 S + + G++ + T +N F + A +KY + Sbjct: 167 SAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDETKYKKYSFSDIEDKSL 226 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + W+ + +Y+A+ +IP+ + F G+ F + I PG+ Sbjct: 227 DITTKGGWVAMLQQYFATAWIPAANE--TNTFYSADLGNGLAAIGFKGAPVVIQPGEQKQ 284 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G + Sbjct: 285 LGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFKLLKFIHSFVGNWGFS 339 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + + M+ LYK Sbjct: 340 IIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMSQEMMALYKAEK 398 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP Sbjct: 399 VNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYY----------- 447 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M ++M+ KMSP D Q I+ +MPV+F FPAGL++Y+ Sbjct: 448 --------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGLVLYY 499 Query: 543 SWSNVISIVQQAVIMK 558 SN+++I+QQ +I + Sbjct: 500 IVSNLVTILQQQLIYR 515 >gi|302880138|ref|YP_003848702.1| membrane protein insertase, YidC/Oxa1 family domain containing [Gallionella capsiferriformans ES-2] gi|302582927|gb|ADL56938.1| membrane protein insertase, YidC/Oxa1 family domain containing [Gallionella capsiferriformans ES-2] Length = 541 Score = 317 bits (811), Expect = 4e-84, Method: Composition-based stats. Identities = 152/567 (26%), Positives = 245/567 (43%), Gaps = 37/567 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-YAAVLID 59 M+ F+ + S ++ W + Y + + A I Sbjct: 1 MDFQR-LFLFLIFSFSLMMVWDGWQRYQNPPVVQQAATTKSDLPVATTKPTDLAAQAAII 59 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 +A + +++K L IN G L+ + V S T N Sbjct: 60 QQAAKVETGKIIKVKTDFLEAEINSVGGDIQRLDFIKHLDGQDKTKQFVLFEKGSGTHN- 118 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHY 178 Y A+ + T + + S ++ +KL AN + + ++ Y Sbjct: 119 YIAQSGLLGTG--MPNHTTVFSAEQDSYQLTGDKLEVKLAAVAANGMKVVKLLTFHKSSY 176 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + + N + I S +++R P + G + + +SD Sbjct: 177 VVDVAYEIENTTAAPITTSAYFQLIRDSIDPAGGSKMVPTYTGMAVYTDKEKFQKIAFSD 236 Query: 237 IEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 +EK I E N W+GI Y+ + ++P +TS + L Y A Sbjct: 237 VEKGKIDYPKEGDNGWIGILQHYFVAAWLPKDKTSREFFTRKLEG--DAYSAGVIVPVAA 294 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 I PG+ + L+AG D P + +D+GW +A P+F +++ Sbjct: 295 IAPGQKAVVSMPLYAGP------AQSTLDSIAPGLGLTVDYGWLTVVATPIFWTLTFIQG 348 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +V N+G+AI+L TV +KLLFFPL+ Y S A M+ + PK+++++ + + L +AM Sbjct: 349 MVQNWGVAIILLTVLIKLLFFPLSAASYRSMAKMRVVAPKLEKIKLQHADDREK-LNRAM 407 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LYKT INPL GC P+L+QIPVF A+Y I S+EMR+APF+GWI DL+AADP Sbjct: 408 MDLYKTEKINPLGGCLPVLIQIPVFIALYWSILASVEMRNAPFFGWITDLSAADPFF--- 464 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 + P++M SMF+Q K++P P D QA I+ MP+ F FP Sbjct: 465 ----------------VLPVLMGASMFLQSKLNPVPPDPIQAKIMKIMPIAFSVVFFWFP 508 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGA 562 AGL++Y +N +SI QQ I + Sbjct: 509 AGLVLYSIVNNALSIAQQWYITRSIEV 535 >gi|30248404|ref|NP_840474.1| 60Kd inner membrane protein [Nitrosomonas europaea ATCC 19718] gi|34098399|sp|P59810|OXAA_NITEU RecName: Full=Inner membrane protein oxaA gi|30138290|emb|CAD84298.1| 60Kd inner membrane protein [Nitrosomonas europaea ATCC 19718] Length = 614 Score = 317 bits (811), Expect = 4e-84, Method: Composition-based stats. Identities = 145/591 (24%), Positives = 253/591 (42%), Gaps = 55/591 (9%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFY-------VYPRIEEMNNERKNIQTVKQPNQVDNSYA 54 N + I S +++ W + P I + ++ + Q+ + Sbjct: 1 MDNKKIVLLIIFSTSLLFLWDAWIKEQEKFNNPPAITQADSSAGSTQSRNDDSLPVPGSE 60 Query: 55 AVLIDDRAQA-----------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 L ++ + +I I+ G L L Sbjct: 61 LTSSQASPDTNGIPASGGNGDSVTPRLLPSGEQIRVVTDKVIAEIDTIGGDLRRLELLQQ 120 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 ++P L S + + L N+ + + I+ Sbjct: 121 PSSEDKDTPYALLYSEAARTYIAQSGLVGEGLPNHKTTFRAESDIRNYELSSGEDKIVIR 180 Query: 158 LVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTF 214 L+ A + +T + + Y+ + V N +R +++R P T Sbjct: 181 LLAPEAQGVQVIKTYTFHRDSYVIDVGFEVENKGDATVRPFAYFQMLRDGNPPPAKTMMI 240 Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHS 273 G + + +SD++K+ + +N W+ + + Y+ + ++P ++T Sbjct: 241 PTFLGAAVYTEEGKYQKIPFSDLDKNKADYPANANNGWIAMLEHYFLTAWLPQQQTPREF 300 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 K SD Y A I PG+ TT +AG +E + P ++ Sbjct: 301 FAKRQSDN--LYSAGVIVPAGVIAPGEIAATTMPFYAGPEEQDNLEGLA-----PGLDLT 353 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+GW IAKP+F L+S++++ N+G+AI+L T+ VKLLFFPL+ Y S A ++ + Sbjct: 354 VDYGWLTVIAKPLFRLLSFYHSWTDNWGVAIILLTMTVKLLFFPLSAAGYRSMAKLRLVT 413 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ +++++K Q + +AM++ YK INP+ GC+PIL+QIPVF A+Y I ++E+ Sbjct: 414 PKLKRIQDQYKG-DRQRMHQAMMEFYKEEKINPMGGCFPILVQIPVFIALYWTILAAVEL 472 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R+AP WI DL++ DP + P++M +SMF+Q K++P P D Sbjct: 473 RYAPLALWIDDLSSPDPFYM-------------------LPLLMGISMFVQTKLNPTPTD 513 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 QA I+ MPV F FPAGL++Y +N++SI QQ I KM+G Sbjct: 514 PLQAKIMQIMPVAFSAIFFFFPAGLVLYSLVNNILSIAQQWKITKMYGTAP 564 >gi|78486534|ref|YP_392459.1| 60 kDa inner membrane insertion protein [Thiomicrospira crunogena XCL-2] gi|78364820|gb|ABB42785.1| protein translocase subunit yidC [Thiomicrospira crunogena XCL-2] Length = 551 Score = 316 bits (810), Expect = 5e-84, Method: Composition-based stats. Identities = 138/575 (24%), Positives = 246/575 (42%), Gaps = 45/575 (7%) Query: 4 NWNYFVAIALSVIIVYAWQNF--------YVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 N F +AL+ +++ W + K ++T + V ++ Sbjct: 2 NMRSFWWLALAFTLLWIWMQWTQFQHKASLPPQTAAVTQQTDKGMETPEINPDVPTAHQT 61 Query: 56 VLIDDRAQA-LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + A+A + + R+ +K L I+ +G D+ L Y + P + Sbjct: 62 MEDVPTAKAKIKQAQRISVKTDVLDIVIDTQGGDIRDVKLLKYAATDDRSQPFRLM--GD 119 Query: 115 NTKNAYFAELDYVSTAN---NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + Y A+ + S + ++ T + L ++ + + Sbjct: 120 TGQMMYVAQNGIALQSKAVLPAPTHKSLYQASQTHYEMTGDTLTVPLTWEQDGVKVTKTY 179 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG---FIAVLGDKS 228 + Y+ + + N + + +++R+ N + Sbjct: 180 VFTKGKYVIGLNYKIDNTTQKEWAGGLYSQLVRNTYDPDHNAMMYTYTGPVLYDGHAESK 239 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + D+ K I + W + Y+ S IP +E+ K L+DG Y A Sbjct: 240 YNKHSFDDLSKQPIQGIQTTGGWAAMIQHYFMSAVIPDQESQNRYYAKPLNDGE--YVAG 297 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 T+ G+S T ++ L+ G + P E+ +D+G IA+P+F Sbjct: 298 VVEPMETVAAGQSQTLSSELYIGPIIQDNLEKIA-----PGLELTVDYGVLTIIAEPIFW 352 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ + LVGN+G +I+L TV +KLLF+ L++ Y S A +K QPK+ +L+E + Sbjct: 353 VLEKIHALVGNWGWSIILLTVLIKLLFYKLSETSYRSMARLKKFQPKLKQLKENYGDDKV 412 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + Q+ M++LYK INPL GC PIL+Q+PVF A+Y V+ S EMR AP+ WI DL+ Sbjct: 413 -IFQQKMMKLYKEEKINPLGGCLPILVQMPVFIALYWVLLYSAEMRQAPWILWIDDLSVK 471 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVF 527 DP I P++M +SM++Q K++P D+ Q ++ +P +F Sbjct: 472 DPYF-------------------ILPVLMGISMWVQQKLNPSAMMDEMQQKVMKALPFIF 512 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 FPAGL++YW +N++S+ QQ I + A Sbjct: 513 TIFFMFFPAGLVLYWVVNNILSVSQQWYITRKIEA 547 >gi|194367815|ref|YP_002030425.1| putative inner membrane protein translocase component YidC [Stenotrophomonas maltophilia R551-3] gi|254778165|sp|B4SPG0|OXAA_STRM5 RecName: Full=Inner membrane protein oxaA gi|194350619|gb|ACF53742.1| 60 kDa inner membrane insertion protein [Stenotrophomonas maltophilia R551-3] Length = 571 Score = 316 bits (810), Expect = 5e-84, Method: Composition-based stats. Identities = 141/589 (23%), Positives = 251/589 (42%), Gaps = 56/589 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM-----------NNERKNIQTVKQPNQV 49 M + + + L V ++ W + + QV Sbjct: 1 MNQTRVFLIFAWLMVAVLL-WMEWSREKAAPTPAPTTTSAPAAAQSVPGATPGSVPNAQV 59 Query: 50 DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + + +A A S RV + L ++ G + D L + SP V Sbjct: 60 PGAPGQAAVQAQASATPASQRVTVTTDVLRLVLD--GGRVLDAELLQFPQTKDEGSPPVR 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNAN 164 LL+ + + Y A + S N +P ++ + K I V+ + Sbjct: 118 LLT-EDPAHPYSAISGWASEDKNTPVPGADGFKLVGDTKDFVLAKGQNELQIPFVWTADS 176 Query: 165 NILFERTISLDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEG 219 + +RT+++ + + D V+N + R + + G Sbjct: 177 GVTIKRTLTVSRNEYAVRFKDEVSNTGAAPWNGYVYRTLDRTPTILSRSMTNPDSFSFNG 236 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 DK + + D + N + + WL + ++ + +IP K+ + H ++ Sbjct: 237 ATWYDNDKKYQRRAFKDYLEDGTLNQNITGGWLAMLQHHFFTAWIPQKDQTAHYVLSQVA 296 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 R + T+ PG+S +T L+ G K I +P + ++D+ F Sbjct: 297 G---RDLIEARGPAFTVAPGQSTSTEARLWVGPKLVNLIAKE----DVPGLDRVVDYSRF 349 Query: 340 YFIA---KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 +A + +F +++ + LVGN+G AI+ V +KL+ +PL+ QY S A M+ QP+I Sbjct: 350 SMMAVIGQGLFWVLNQVHKLVGNWGWAIVGLVVLLKLVLYPLSATQYKSGAKMRRFQPRI 409 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +L+E++ Q Q AM++LYK INP+ GC PIL+Q+P+FFA+Y V+ S+E+R A Sbjct: 410 AQLKERYGD-DRQKFQTAMMELYKKEKINPMGGCLPILIQMPIFFALYWVLVESVELRQA 468 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKG 515 P++GWI+DL A DP I P+I M+ K++P P D Sbjct: 469 PWFGWIQDLTARDPYF-------------------ILPVINVAVMWFTQKLTPAPGMDPM 509 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q ++ +MP+VF ++ P+GL++YW + + ++QQ + K HG E Sbjct: 510 QQKMMQFMPLVFGVMMAFMPSGLVLYWVVNGGLGLLQQWWMTKRHGGEP 558 >gi|303256374|ref|ZP_07342388.1| inner membrane protein OxaA [Burkholderiales bacterium 1_1_47] gi|331001500|ref|ZP_08325118.1| membrane protein insertase, YidC/Oxa1 family domain protein [Parasutterella excrementihominis YIT 11859] gi|302859865|gb|EFL82942.1| inner membrane protein OxaA [Burkholderiales bacterium 1_1_47] gi|329568229|gb|EGG50046.1| membrane protein insertase, YidC/Oxa1 family domain protein [Parasutterella excrementihominis YIT 11859] Length = 565 Score = 316 bits (809), Expect = 6e-84, Method: Composition-based stats. Identities = 143/582 (24%), Positives = 246/582 (42%), Gaps = 47/582 (8%) Query: 2 ERNWNYF-VAIALSVIIVY-AWQNFYVYPRIE-EMNNERKNIQTVKQPNQVDNSYAAVLI 58 + + LS ++Y W+ + P + + K + + + Sbjct: 4 DIQRALLWILFGLSAFMLYDRWEVYNGRPSFFGAETQQVATTEAPKNEAALPSQSQTASL 63 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV--------------SSN 104 A+ + ++++ L S + +GA LR + + Sbjct: 64 PAEAKTAVKAEPIQVETDLLKLSFDPEGAVIIGSELRKEKQTIPWTDTGLVGMILGNKAE 123 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +P +L Y A+ + V + +K ++ Sbjct: 124 TPADVVLFTEQKGRTYLAQTGLIGGPYPTHKTQFKLVPGPLKMADGQDNLTVKFEGESGG 183 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIA 222 + + HY K+ V NN+ +I+ S ++ R P+ + G Sbjct: 184 VKVIKSFTFERGHYGIKVSHEVVNNTASEIKPSVYYQLTRDGEKPEGESTMVNAYTGAAV 243 Query: 223 VLGDKSLVEQKYSDIEK-SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 + +SDI N W+ + Y+ S ++P++ + + G Sbjct: 244 YTDKDKFQKVSFSDIADGDKDFQAKADNGWIAMIQHYFVSAWVPTQGVERENYTNTV--G 301 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 Y TI P S T L++G ++ + P +++D+GW F Sbjct: 302 EKLYAVGSIQQMDTIAPNSSKTIEATLYSGPQDQTRLDAIA-----PGLSLVVDYGWLTF 356 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +AKP++ L+S+ Y +VGN+G AI+L T VK + +PL+ Y S A MK++ P++ L+E Sbjct: 357 LAKPIYWLLSFLYGIVGNWGWAIVLLTCIVKAILYPLSLAGYRSMAKMKDLGPRMKALKE 416 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ Q L AM+++YKT INP+ GC PI LQ+PVF A+Y V+ S+E+R AP+ W Sbjct: 417 KYGDDK-QRLNMAMMEMYKTEKINPVGGCLPIALQLPVFLALYWVLLASVELRDAPWIFW 475 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + DLAA DP I PI+M ++M IQ K++P P D QA ++ Sbjct: 476 VTDLAAPDPWF-------------------ILPILMIITMVIQFKLNPTPPDPVQAKMMA 516 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 MP VF F +GL++YW +N++SI+QQ V+ K A+ Sbjct: 517 IMPFVFGIMFIFFASGLVLYWLVNNILSIIQQYVVNKQIEAD 558 >gi|296314151|ref|ZP_06864092.1| membrane protein insertase, YidC/Oxa1 family [Neisseria polysaccharea ATCC 43768] gi|296839184|gb|EFH23122.1| membrane protein insertase, YidC/Oxa1 family [Neisseria polysaccharea ATCC 43768] Length = 545 Score = 316 bits (809), Expect = 6e-84, Method: Composition-based stats. Identities = 140/575 (24%), Positives = 242/575 (42%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q V + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y + + N P L + + Y Sbjct: 56 ----------ITVTTDTVQAVIDEKSGDLRRLTLLKYKANGNENKPFS--LFDDSKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L N + ++L N + ++ + + YL Sbjct: 104 VAQSELLDAQGNNILKGVNFTAAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237 + +TN S S RI+R Q + G + + + +SD+ Sbjct: 164 VNVRFDITNTSGKPANLSADYRIVRDHSQPEGQGYFTRSYLGPVVYTPEDKFQKVSFSDL 223 Query: 238 EKSSISNFHE-------SNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S +E WLG+ + ++ S +I + + Sbjct: 224 DDDAKSGKNEAEYARKTQTGWLGMIEHHFMSAWILQPKGGQSVCAAGDCRIDIKRRNDNL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y S I G + L+AG + I + + ++ D+G ++ A Sbjct: 284 YSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIAD-----KLQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ ADP I PIIM+ +MF Q ++PPP D QA ++ MP Sbjct: 458 LSRADPYY-------------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++F FPAGL++YW +N+++I QQ I + Sbjct: 499 LIFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|238759578|ref|ZP_04620740.1| Inner membrane protein oxaA [Yersinia aldovae ATCC 35236] gi|238702237|gb|EEP94792.1| Inner membrane protein oxaA [Yersinia aldovae ATCC 35236] Length = 531 Score = 316 bits (809), Expect = 6e-84, Method: Composition-based stats. Identities = 129/507 (25%), Positives = 224/507 (44%), Gaps = 42/507 (8%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + +K L +IN +G + NL Y + S+ L + Y A+ Sbjct: 38 SGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFVYQAQS 95 Query: 125 DYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL 179 + N I L F + +F +T L + Sbjct: 96 GLTGKSGPDNPANGERPLFETPQTSFVLADGQDELRIPLTFTGKDGSVFIKTFVLKRNDY 155 Query: 180 -FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQK 233 + V N S + + G++ + T +N F + A +K Sbjct: 156 AIGVDYHVKNASAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDETKYKK 215 Query: 234 Y-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 Y + + W+ + +Y+A+ +IP+ + F G+ F Sbjct: 216 YSFSDIEDKSLDITTKGGWVAMLQQYFATAWIPTANE--TNTFYSADLGNGLAAIGFKGA 273 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + I PG++ L+ G + + P ++ +D+GW +FI++P+F L+ + Sbjct: 274 PVVIQPGEAKQLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFKLLKF 328 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 329 IHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMS 387 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP Sbjct: 388 QEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYY 447 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I PI+M ++M+ KMSP D Q I+ +MPV+F Sbjct: 448 -------------------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFF 488 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++Y+ SN+++I+QQ +I + Sbjct: 489 LWFPAGLVLYYIVSNLVTILQQQLIYR 515 >gi|149925381|ref|ZP_01913645.1| 60 kDa inner membrane insertion protein [Limnobacter sp. MED105] gi|149825498|gb|EDM84706.1| 60 kDa inner membrane insertion protein [Limnobacter sp. MED105] Length = 558 Score = 316 bits (809), Expect = 7e-84, Method: Composition-based stats. Identities = 135/528 (25%), Positives = 230/528 (43%), Gaps = 32/528 (6%) Query: 34 NNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 + Q V + + A+A + + +K L + +GAQ Sbjct: 50 SAANDLPQAVAPTAGDVPADPNAIAPSIAEAAPAAQTITVKTDVLELQFSSQGAQLITSK 109 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L + + + P+ SN A L V A N + Sbjct: 110 LLNHPAAENPDLPVQLFEQTSNRTYVGQAGLVGVPDAPNHRTLFELVSGS-TEFAPGQDQ 168 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ--TAT 211 + + Y +V N ++ + S +I R + + Sbjct: 169 LKLVFKATSGGIENTTTYTIFKNRYDIDLVINARNTGVEPVSPSAYVQITRDGNPLESDS 228 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETS 270 + + G +K + + DI S + WL + Y+ S + Sbjct: 229 SLYATFTGPAVYTPEKKYQKIDFEDIADRSADYVKTADSGWLAMIQHYFVSAIVGQDGPR 288 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + Y ++ T+ P ++ T T L+ G ++ + P Sbjct: 289 ENYT---RQVDSNLYSIGLVSSLGTLAPEQTATYTAKLYTGPQDQSVLEALS-----PGL 340 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++++D+GW IA+P++ L+ ++ +GN+G AI++ T+ +KL+FFPL+ Y S A M+ Sbjct: 341 DLVVDYGWLTVIAQPIYWLLEKIHSYIGNWGWAIVVLTILIKLVFFPLSAASYKSMAKMR 400 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P++ +L+E++ Q+AM+++YK INPL GC PIL+QIPVF A+Y V+ S Sbjct: 401 KVGPRMQKLKEQYGDDK-MGFQRAMMEMYKREKINPLGGCMPILIQIPVFIALYWVLLAS 459 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +EMR+AP+ GW+ DLAA DP I P+IM+++MFIQ +++P Sbjct: 460 VEMRNAPWLGWVTDLAAPDPFY-------------------ILPVIMAVTMFIQTRLNPT 500 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P D QA I+ MP+VF FPAGL++YW +N++SI QQ VI + Sbjct: 501 PPDPVQAKIMMIMPLVFSVMFIFFPAGLVLYWVVNNILSIAQQWVITR 548 >gi|309784245|ref|ZP_07678884.1| inner membrane protein oxaA [Shigella dysenteriae 1617] gi|308927752|gb|EFP73220.1| inner membrane protein oxaA [Shigella dysenteriae 1617] gi|315618589|gb|EFU99175.1| inner membrane protein oxaA [Escherichia coli 3431] gi|320180047|gb|EFW54989.1| Inner membrane protein translocase component YidC, long form [Shigella boydii ATCC 9905] gi|323173324|gb|EFZ58953.1| inner membrane protein oxaA [Escherichia coli LT-68] gi|332084895|gb|EGI90078.1| inner membrane protein oxaA [Shigella boydii 5216-82] gi|332345696|gb|AEE59030.1| inner membrane protein OxaA [Escherichia coli UMNK88] Length = 531 Score = 316 bits (809), Expect = 7e-84, Method: Composition-based stats. Identities = 134/554 (24%), Positives = 243/554 (43%), Gaps = 52/554 (9%) Query: 19 YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78 WQ + ++ +Q Q + A D A + +K L Sbjct: 1 MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51 Query: 79 IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138 +IN +G + L Y +++S P L ++ + Y A+ N Sbjct: 52 DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109 Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192 + + + + +A F +T L Y + V N Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169 Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245 + S G++ + T ++ F + A + K+ I + N Sbjct: 170 PLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTGAMN 287 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+ Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK +N Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y+ Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502 Query: 545 SNVISIVQQAVIMK 558 SN+++I+QQ +I + Sbjct: 503 SNLVTIIQQQLIYR 516 >gi|110807605|ref|YP_691125.1| putative inner membrane protein translocase component YidC [Shigella flexneri 5 str. 8401] gi|110617153|gb|ABF05820.1| 60 kDa inner-membrane protein [Shigella flexneri 5 str. 8401] gi|332750697|gb|EGJ81105.1| inner membrane protein oxaA [Shigella flexneri 4343-70] gi|332764076|gb|EGJ94313.1| inner-membrane protein insertion factor [Shigella flexneri 2930-71] gi|332996038|gb|EGK15665.1| inner membrane protein oxaA [Shigella flexneri VA-6] gi|332997270|gb|EGK16886.1| inner membrane protein oxaA [Shigella flexneri K-218] gi|332997871|gb|EGK17479.1| inner membrane protein oxaA [Shigella flexneri K-272] gi|333013180|gb|EGK32553.1| inner membrane protein oxaA [Shigella flexneri K-304] gi|333013666|gb|EGK33031.1| inner membrane protein oxaA [Shigella flexneri K-227] Length = 531 Score = 316 bits (808), Expect = 7e-84, Method: Composition-based stats. Identities = 134/554 (24%), Positives = 243/554 (43%), Gaps = 52/554 (9%) Query: 19 YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78 WQ + ++ +Q Q + A D A + +K L Sbjct: 1 MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51 Query: 79 IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138 +IN +G + L Y +++S P L ++ + Y A+ N Sbjct: 52 DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109 Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192 + + + + +A F +T L Y + V N Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169 Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245 + S G++ + T ++ F + A + K+ I + N Sbjct: 170 PLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIVAIGYKSQPVLVQPGQTGAMN 287 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+ Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK +N Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y+ Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502 Query: 545 SNVISIVQQAVIMK 558 SN+++I+QQ +I + Sbjct: 503 SNLVTIIQQQLIYR 516 >gi|238787832|ref|ZP_04631629.1| Inner membrane protein oxaA [Yersinia frederiksenii ATCC 33641] gi|238724175|gb|EEQ15818.1| Inner membrane protein oxaA [Yersinia frederiksenii ATCC 33641] Length = 531 Score = 316 bits (808), Expect = 7e-84, Method: Composition-based stats. Identities = 129/507 (25%), Positives = 223/507 (43%), Gaps = 42/507 (8%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + +K L +IN +G + NL Y + S+ L + Y A+ Sbjct: 38 SGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFIYQAQS 95 Query: 125 DYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL 179 + N + I L F + +F +T L + Sbjct: 96 GLTGKSGPDNPANGERPLFEVPQTSFILADGQDELRIPLTFTGKDGSVFTKTFLLKRNDY 155 Query: 180 -FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQK 233 + V N S + + G++ + T +N F + A +K Sbjct: 156 AIGVDYHVKNASEAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDETKYKK 215 Query: 234 Y-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 Y + W+ + +Y+A+ +IP+ + F G+ F Sbjct: 216 YSFSDIEDKSLEITTKGGWVAMLQQYFATAWIPTANE--TNTFYSADLGNGLAAIGFKGT 273 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + I PG+ L+ G + + P ++ +D+GW +FI++P+F L+ + Sbjct: 274 PVVIQPGEQKQLGATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFKLLKF 328 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 329 IHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMS 387 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP Sbjct: 388 QEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYY 447 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I PI+M ++M+ KMSP D Q I+ +MPV+F Sbjct: 448 -------------------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFF 488 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++Y+ SN+++I+QQ +I + Sbjct: 489 LWFPAGLVLYYIVSNLVTILQQQLIYR 515 >gi|254521534|ref|ZP_05133589.1| inner membrane protein OxaA [Stenotrophomonas sp. SKA14] gi|219719125|gb|EED37650.1| inner membrane protein OxaA [Stenotrophomonas sp. SKA14] Length = 571 Score = 316 bits (808), Expect = 8e-84, Method: Composition-based stats. Identities = 141/589 (23%), Positives = 248/589 (42%), Gaps = 56/589 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + + L V ++ W + + Q + A Sbjct: 1 MNQTRVFLIFAWLMVAVLL-WMEWSREKAAPTPAPTTTSAPAAAQSVPGSSPGAIPSAQV 59 Query: 61 R-----------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 A A S RV + L ++ G + D L + SP V Sbjct: 60 PGAPGQAAVQAQASATPASQRVTVTTDVLRLVLD--GGRVLDAELLQFPQTKDEGSPPVR 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNAN 164 LL+ + + Y A + S N +P ++ + I V+ N Sbjct: 118 LLT-EDPAHPYSAISGWASEDKNTPVPGADGFKLVGDTNDFVLAKGQNELQIPFVWTADN 176 Query: 165 NILFERTISLDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEG 219 + +RT+++ + + D V+N + R + + G Sbjct: 177 GVTIKRTLTVSRNEYAVRFKDEVSNTGTAPWNGYVYRTLDRTPTILSRSMTNPDSFSFNG 236 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 DK + + D + N + + WL + ++ + +IP K+ + H ++ Sbjct: 237 ATWYDNDKKYQRRAFKDYLEDGTLNQNITGGWLAMLQHHFFTAWIPQKDQTAHYVLSQVA 296 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 R + T+ PG+S +T L+ G K I +P + ++D+ F Sbjct: 297 G---RDLIEARGPAFTVAPGQSTSTEARLWVGPKLVNLIAKE----DVPGLDRVVDYSRF 349 Query: 340 YFIA---KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 +A + +F +++ + LVGN+G AI+ V +KL+ +PL+ QY S A M+ QP+I Sbjct: 350 SMMAVIGQGLFWVLNQVHKLVGNWGWAIVGLVVLLKLVLYPLSATQYKSGAKMRRFQPRI 409 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +L+E++ Q Q AM++LYK INP+ GC PIL+Q+P+FFA+Y V+ S+E+R A Sbjct: 410 AQLKERYGD-DRQKFQTAMMELYKKEKINPMGGCLPILIQMPIFFALYWVLVESVELRQA 468 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKG 515 P++GWI+DL A DP I P+I M+ K++P P D Sbjct: 469 PWFGWIQDLTARDPYF-------------------ILPVINVAVMWFTQKLTPAPGMDPM 509 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q ++ +MP+VF ++ P+GL++YW + + ++QQ + K HG E Sbjct: 510 QQKMMQFMPLVFGVMMAFMPSGLVLYWVVNGGLGLLQQWWMTKRHGGEP 558 >gi|73543142|ref|YP_297662.1| putative inner membrane protein translocase component YidC [Ralstonia eutropha JMP134] gi|123623711|sp|Q46VL6|OXAA_RALEJ RecName: Full=Inner membrane protein oxaA gi|72120555|gb|AAZ62818.1| protein translocase subunit yidC [Ralstonia eutropha JMP134] Length = 555 Score = 316 bits (808), Expect = 8e-84, Method: Composition-based stats. Identities = 145/579 (25%), Positives = 236/579 (40%), Gaps = 50/579 (8%) Query: 1 MERNWNYFVAIALSVIIVYAW----------QNFYVYPRIEEMNNERKNIQTVKQPNQVD 50 M+ + + S+ +V + F+ ++ + + + Sbjct: 1 MDI-KRTILWVIFSMSLVLLYDNWQRANGHASMFFPSATQQQAASAPAASAAQGDVPKAN 59 Query: 51 NSYAAVLIDDRAQALS-----MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + A A ++ + + I+ G L L H + Sbjct: 60 ATAGAAAPAAPGGAPQAAAQPTGEKIIVTTDEVRAEIDTAGGILSRLELLNEHE---KDG 116 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 V L +T Y A + + T + L Sbjct: 117 KPVVLF-ERDTTRTYMARSGLIG-GDLPNHTTVFTATPGPRTLDGADKLEVTLTADKNGV 174 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-VQEGFIAVL 224 + + Y+ VTN+ + + + R + + F G Sbjct: 175 KFVKTYVFHKGSYVVDARFAVTNDGTAPVSPTLYMELARDGSKVEQSQFYSTFTGPAIYT 234 Query: 225 GDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + + DI K S ++ W+ + Y+AS +IP F Sbjct: 235 DADKYHKITFDDIAKGKASTPAATTSGWVAMVQHYFASAWIPQAGKEH--SFYVQQIDPN 292 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ I PG ++TT LFAG +E + P E++ D+GW +A Sbjct: 293 LYRVGIQQPLGQIAPGATVTTDARLFAGPQEERMLEKIT-----PGLELVKDYGWLTILA 347 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ + + N+G +I+ TV +KL+FFPL+ Y S MK++QP++ +RE+ Sbjct: 348 KPLFWLLEKLHGFLNNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIRERH 407 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K PQ + M+ LYKT +NPL GC PI++QIPVF A+Y V+ S+EMR AP+ GWI Sbjct: 408 KG-DPQKMNAEMMALYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIH 466 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I PI+M++SMF+Q +++P P D QA ++ M Sbjct: 467 DLSVPDPFY-------------------ILPIVMAVSMFVQTRLNPTPPDPVQAKVMMIM 507 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P+VF F FPAGL++YW +N++SI QQ I +M G Sbjct: 508 PLVFSFMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGK 546 >gi|238750292|ref|ZP_04611794.1| Inner membrane protein oxaA [Yersinia rohdei ATCC 43380] gi|238711525|gb|EEQ03741.1| Inner membrane protein oxaA [Yersinia rohdei ATCC 43380] Length = 531 Score = 316 bits (808), Expect = 8e-84, Method: Composition-based stats. Identities = 136/556 (24%), Positives = 236/556 (42%), Gaps = 54/556 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AWQ + + N T + +Q + +K Sbjct: 1 MIWQAWQVDNNPQPAAQTTQQTANTATGDKASQAVPGS------------GQGQLITVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 L +IN +G D NL Y + S+ L + Y A+ Sbjct: 49 DVLSLTINTRGGDIDQANLLAYPDALGSDKTFELL--ETTPGFIYQAQSGLTGKNGPDNP 106 Query: 136 PNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL-FKIVDTVTNN 189 N + I + F + +F +T L + + V N Sbjct: 107 ANGERPLFEVPQTSFVLADGQDELRIPMTFTGKDGSVFIKTFVLKRNDYAIGVDYHVKNA 166 Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQKY-SDIEKSSIS 243 S + + G++ + T +N F + A +KY + Sbjct: 167 SEAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAFSSDETKYKKYSFSDIEDKNL 226 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + W+ + +Y+A+ +IP+ + F G+ F + I PG+ Sbjct: 227 DITTKGGWVAMLQQYFATAWIPTANE--TNTFYSADLGNGLAAIGFKGAPVVIQPGEQKQ 284 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G + Sbjct: 285 LSATLWVGPEIQDKMAAIA-----PHLDLTVDYGWLWFISQPLFKLLKFIHSFVGNWGFS 339 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + + M+ LYK Sbjct: 340 IIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMSQEMMALYKAEK 398 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP Sbjct: 399 VNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFIWWIHDLSAQDPYY----------- 447 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M ++M+ KMSP D Q I+ +MPV+F FPAGL++Y+ Sbjct: 448 --------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGLVLYY 499 Query: 543 SWSNVISIVQQAVIMK 558 SN+++I+QQ +I + Sbjct: 500 IVSNLVTILQQQLIYR 515 >gi|293417177|ref|ZP_06659804.1| inner membrane protein oxaA [Escherichia coli B185] gi|293464029|ref|ZP_06664443.1| inner membrane protein oxaA [Escherichia coli B088] gi|312972003|ref|ZP_07786177.1| inner membrane protein oxaA [Escherichia coli 1827-70] gi|291321661|gb|EFE61097.1| inner membrane protein oxaA [Escherichia coli B088] gi|291431208|gb|EFF04201.1| inner membrane protein oxaA [Escherichia coli B185] gi|310334380|gb|EFQ00585.1| inner membrane protein oxaA [Escherichia coli 1827-70] gi|320191195|gb|EFW65845.1| Inner membrane protein translocase component YidC, long form [Escherichia coli O157:H7 str. EC1212] gi|320193748|gb|EFW68381.1| Inner membrane protein translocase component YidC, long form [Escherichia coli WV_060327] gi|323164683|gb|EFZ50478.1| inner membrane protein oxaA [Shigella sonnei 53G] gi|323182500|gb|EFZ67904.1| inner membrane protein oxaA [Escherichia coli 1357] gi|323189560|gb|EFZ74840.1| inner membrane protein oxaA [Escherichia coli RN587/1] gi|325499510|gb|EGC97369.1| putative inner membrane protein translocase component YidC [Escherichia fergusonii ECD227] gi|326337246|gb|EGD61081.1| Inner membrane protein translocase component YidC, long form [Escherichia coli O157:H7 str. 1044] gi|326341617|gb|EGD65406.1| Inner membrane protein translocase component YidC, long form [Escherichia coli O157:H7 str. 1125] Length = 531 Score = 316 bits (808), Expect = 9e-84, Method: Composition-based stats. Identities = 134/554 (24%), Positives = 243/554 (43%), Gaps = 52/554 (9%) Query: 19 YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78 WQ + ++ +Q Q + A D A + +K L Sbjct: 1 MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51 Query: 79 IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138 +IN +G + L Y +++S P L ++ + Y A+ N Sbjct: 52 DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109 Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192 + + + + +A F +T L Y + V N Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169 Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245 + S G++ + T ++ F + A + K+ I + N Sbjct: 170 PLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTGAMN 287 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+ Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK +N Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y+ Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502 Query: 545 SNVISIVQQAVIMK 558 SN+++I+QQ +I + Sbjct: 503 SNLVTIIQQQLIYR 516 >gi|238793138|ref|ZP_04636766.1| Inner membrane protein oxaA [Yersinia intermedia ATCC 29909] gi|238727511|gb|EEQ19037.1| Inner membrane protein oxaA [Yersinia intermedia ATCC 29909] Length = 529 Score = 316 bits (808), Expect = 9e-84, Method: Composition-based stats. Identities = 129/507 (25%), Positives = 222/507 (43%), Gaps = 42/507 (8%) Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAEL 124 + +K L +IN +G + NL Y + S+ L + Y A+ Sbjct: 38 SGQGQLITVKTDVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL--ETTPAFVYQAQS 95 Query: 125 DYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL 179 + N I L F + +F +T L + Sbjct: 96 GLTGKSGPDNPANGERPLFEAPQTSFVLADGQDELRIPLTFTGKDGSVFTKTFVLKRNDY 155 Query: 180 -FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQK 233 + V N S + + G++ + T +N F + A +K Sbjct: 156 AIGVDYHVKNASAAPLELTLFGQLKQSINLPKHRDTGSNNFALHTYRGAAYSSDDTKYKK 215 Query: 234 Y-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 Y + + W+ + +Y+A+ +IP + F G+ F Sbjct: 216 YSFSDIEDKNMDITTKGGWVAMLQQYFATAWIPVANE--TNTFYSSDLGNGLAAIGFKGA 273 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + I PG+ L+ G + + P ++ +D+GW +FI++P+F L+ + Sbjct: 274 PVIIQPGEQKQLGATLWVGPEIQDKMAVIA-----PHLDLTVDYGWLWFISQPLFKLLKF 328 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + Sbjct: 329 IHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMS 387 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP Sbjct: 388 QEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYY 447 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I PI+M ++M+ KMSP D Q I+ +MPV+F Sbjct: 448 -------------------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFF 488 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL++Y+ SN+++I+QQ +I + Sbjct: 489 LWFPAGLVLYYIVSNLVTILQQQLIYR 515 >gi|320174821|gb|EFW49944.1| Inner membrane protein translocase component YidC, long form [Shigella dysenteriae CDC 74-1112] gi|320185530|gb|EFW60296.1| Inner membrane protein translocase component YidC, long form [Shigella flexneri CDC 796-83] gi|332089380|gb|EGI94484.1| inner membrane protein oxaA [Shigella boydii 3594-74] Length = 531 Score = 315 bits (807), Expect = 9e-84, Method: Composition-based stats. Identities = 134/554 (24%), Positives = 243/554 (43%), Gaps = 52/554 (9%) Query: 19 YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78 WQ + ++ +Q Q + A D A + +K L Sbjct: 1 MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51 Query: 79 IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138 +IN +G + L Y +++S P L ++ + Y A+ N Sbjct: 52 DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109 Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192 + + + + +A F +T L Y + V N Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169 Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245 + S G++ + T ++ F + A + K+ I + N Sbjct: 170 PLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTGAMN 287 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+ Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK +N Sbjct: 343 IITFIVRGIMYPLTKTQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y+ Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502 Query: 545 SNVISIVQQAVIMK 558 SN+++I+QQ +I + Sbjct: 503 SNLVTIIQQQLIYR 516 >gi|134096616|ref|YP_001101691.1| preprotein translocase membrane subunit [Herminiimonas arsenicoxydans] gi|166975870|sp|A4GAN3|OXAA_HERAR RecName: Full=Inner membrane protein oxaA gi|133740519|emb|CAL63570.1| Inner membrane protein OxaA [Herminiimonas arsenicoxydans] Length = 569 Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats. Identities = 146/579 (25%), Positives = 239/579 (41%), Gaps = 39/579 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM-----------------NNERKNIQTVK 44 + + S ++ W N+ Y + NN K Sbjct: 1 MDIKRTVLWVIFSFSLLMLWDNYNRYTGKPSIFFDSTTTQQAAAPAATGNNAAKTADAPT 60 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 S A A S + + + I+ G + L L +H Sbjct: 61 AATTAATSGANTPGVPDGAAAVKSEVITITTDLMKIGIDTAGGEVRHLELLKHHESGDE- 119 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 S V L N ++ Y + + + + L + Sbjct: 120 SKNVVLF-DENGQHTYLGQTGLIG-GAYPNHKSMFAAVPGPRTLDSANQVQLVLQSEQQG 177 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV---QEGFI 221 L + Y I V NN+ I S +++ + + G Sbjct: 178 VKLIKTFTFKRGEYKVDIKHDVVNNTSTAITPSLYLQLVHDGSALGGGSMFMASAFTGPA 237 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + IEK + + + W+ + Y+ S F+P T K L Sbjct: 238 IYTEADKFQKVTFESIEKGKAEHAMKGESGWIALVQHYFVSAFVPPANTPREYFTKKL-- 295 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y T+ PG + + +++G +E + P FE++ D+GW Sbjct: 296 ATNLYAVGTILPMGTVAPGATASMDTTMYSGPQESKRLEAVA-----PGFELVKDYGWLT 350 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 IAKP+F LM + ++GN+G I++ T+ +KL FFPL+ Y S A MK + PK+ ++R Sbjct: 351 IIAKPIFWLMMQIHQILGNWGWTIIVLTIVIKLAFFPLSAAGYRSMAKMKLVTPKMTDIR 410 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 ++K PQ + AM++LYK INP+ GC+P+L+QIPVF ++Y V+ S+E+R+A + Sbjct: 411 TRYKG-EPQKMNAAMMELYKKEKINPIGGCFPMLVQIPVFISLYWVLLASVEIRNASW-L 468 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DLAA D G + +GI PI+M++SMFIQ K++P P D QA ++ Sbjct: 469 WIHDLAAPDILFGSYHIG------TFHLTIGILPILMAISMFIQTKLNPTPPDPIQAKVM 522 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +MP+ F FPAGL++YW +N++SI QQ I + Sbjct: 523 MFMPIAFSVMFFFFPAGLVLYWVVNNILSIAQQWFINEK 561 >gi|260221779|emb|CBA30684.1| Inner membrane protein oxaA [Curvibacter putative symbiont of Hydra magnipapillata] Length = 565 Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats. Identities = 131/586 (22%), Positives = 232/586 (39%), Gaps = 47/586 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF---------YVYPRIEEMNNERKNIQTVKQPNQVDN 51 M + + +V W + + ++ + + V Sbjct: 1 MNDIRRTILWVIFGFSMVLLWDQWQIHNGKQATFFPNPAQKAASAPAPAVSASAGVPVAP 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + S R E+ L + + G Y + V L Sbjct: 61 VAAGQAPVSTSAPALASERFEVSTDVLKLTFDTLGGSLVRSEFLQYLDSNDKSRNFVLL- 119 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI----KLVFKNANNIL 167 Y A+ + A P +V + K L L Sbjct: 120 -DDTKDRYYQAQTGLIGGAAPDSFPTHKSVMAVSGDKSLKDGQDELKIVFTSQDTGGIKL 178 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLG 225 + Y + V N + +++R P ++ + G Sbjct: 179 VKTYTLRRGAYDIAVKHEVVNTGATALNPQLYLQLVRDGNKPAGESSFYSTFTGPAVYTD 238 Query: 226 DKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDG--- 281 K + ++S I+K + ES N ++ + Y+AS +I + G Sbjct: 239 LKKYQKVEFSAIKKGNADFEKESSNGYIAMVQHYFASAWILPADEKRTFSLDAKDVGATV 298 Query: 282 -HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 Y+A + PG++ LF G +E + P E++ D+GW Sbjct: 299 ADCCYRATMITPLEAVAPGQTKAVEAKLFVGPQEEKKLEALA-----PGMELVKDYGWLT 353 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 +AKP++ L+ ++ + N+G +I+ + +K+ F+ L K Y S A MK + P+I E+R Sbjct: 354 ILAKPLYWLLDKLHSFIQNWGWSIVALVLLLKIAFYWLNAKAYASMAKMKAVNPRIMEMR 413 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E+ K +P Q+ Q+ M+++Y+ +NP+ GC+PI++QIPVF A+Y V+ S+EMR+AP+ Sbjct: 414 ERLKDNPQQM-QQEMMKIYREEKVNPMGGCFPIMIQIPVFIALYWVLLSSVEMRNAPWVM 472 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL++ DP I P++M+L+ +Q ++P P D QA ++ Sbjct: 473 WIHDLSSPDPYF-------------------ILPVVMTLTTLLQTALNPAPPDPLQAKMM 513 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 MP+ F FP+GL++YW +N++SI QQ +I G Sbjct: 514 WIMPLAFSVMFFFFPSGLVLYWITNNILSIAQQWIINTRMGVPPQF 559 >gi|332968628|gb|EGK07682.1| YidC/Oxa1 family membrane protein insertase [Kingella kingae ATCC 23330] Length = 556 Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats. Identities = 130/601 (21%), Positives = 251/601 (41%), Gaps = 67/601 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ F+A ALS +I+ W+ + P+++ V+ + + + Sbjct: 1 MDF-KRMFIAFALSFLILMGWEQMFPRPQVQTTGANATATSQVQAASALSETVP------ 53 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + ++ ++ I+ K L L Y+ N V Y Sbjct: 54 ----------ITVQTDTVQAIIDEKSGDLRGLTLNQYNAAADENQKFVLF-----ADGKY 98 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL- 179 A+ + L + S + ++L + A+ + ++ + ++ Sbjct: 99 LAQSHLLDANGKNLLDGVSFSSPQKSYTLNGDKLEVRLTAQAASGVQVDKVYTFHKNSYL 158 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKP-QTATNTFG--VQEGFIAVLGDKSLVEQKYSD 236 + V N ++ +++R F + + +SD Sbjct: 159 INVRFDVKNTGSSAVKVGTSYQVVRDNSKPEGEGWFMQSYHGPVVYTPDADEFQKVTFSD 218 Query: 237 IEKS-------SISNFHESNSWLGISDKYWASVFI--PSKETSFHS----QFKYLSDGHA 283 ++ + + ++G+ Y+ S +I P++ + + Sbjct: 219 LDDDFASGKDTAEYQRKATGGYVGMIQHYFVSAWIMQPAQGDNVCAQAACTVDIKKRSEQ 278 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 YQA + + G + + L+AG + + P F++ D+G + A Sbjct: 279 LYQAGVNVAAADVAAGATQSFGANLYAGPQVTSVLKTVA-----PEFDLTKDYGRVHIFA 333 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 P+F L+++ + L+GN+G AI+ T+ VK + +PL K Y S A M+ + PK++ L+ K Sbjct: 334 APLFALLNWLHGLIGNWGWAIVFLTMIVKAVLYPLNDKAYKSMAKMRAVAPKMEALK-KQ 392 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 LQ+AM++LY+ INPL GC P+LLQ+P+F +Y +I +S+E+R AP+ GWI Sbjct: 393 YGEDRMGLQQAMMKLYRDEKINPLGGCLPMLLQMPIFIGLYWMIFLSVELRQAPWLGWIT 452 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I PI+M+ +M+ Q ++PPP+D QA ++ M Sbjct: 453 DLSRPDPWF-------------------ILPILMAATMWFQTTLNPPPSDPMQAQMIKIM 493 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK---MHGAEIGLIDRLRSTFSKNYNS 580 P++F FPAGL++Y+ +N+++I QQ I + M ++D+ + S Sbjct: 494 PLIFSIMFFFFPAGLVLYYVINNLLTIAQQWHINRQTEMVATAPQVLDKEPNGKKNKKYS 553 Query: 581 Q 581 + Sbjct: 554 E 554 >gi|332084044|gb|EGI89251.1| inner membrane protein oxaA [Shigella dysenteriae 155-74] Length = 531 Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats. Identities = 134/554 (24%), Positives = 243/554 (43%), Gaps = 52/554 (9%) Query: 19 YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78 WQ + ++ +Q Q + A D A + +K L Sbjct: 1 MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51 Query: 79 IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138 +IN +G + L Y +++S P L ++ + Y A+ N Sbjct: 52 DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109 Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192 + + + + +A F +T L Y + V N Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169 Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245 + S G++ + T ++ F + A + K+ I + N Sbjct: 170 PLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTGAMN 287 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+ Sbjct: 288 STLWVGPEIQDKMATVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK +N Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y+ Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502 Query: 545 SNVISIVQQAVIMK 558 SN+++I+QQ +I + Sbjct: 503 SNLVTIIQQQLIYR 516 >gi|171464337|ref|YP_001798450.1| 60 kDa inner membrane insertion protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|254773010|sp|B1XSN7|OXAA_POLNS RecName: Full=Inner membrane protein oxaA gi|171193875|gb|ACB44836.1| 60 kDa inner membrane insertion protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 557 Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats. Identities = 159/588 (27%), Positives = 267/588 (45%), Gaps = 57/588 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFY------------VYPRIEEMNNERKNIQTVKQPNQ 48 M+ F A A S+ + + N+ + N + Sbjct: 1 MDFKKTIFWA-AFSMSGLMLYNNWQVHEGKPSLFGGAPASAPAVADKATTNNKVDVPTQI 59 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A A+ + + L+N L+ I+ GA D L +++ + V Sbjct: 60 SGAPSVAATPIINGGAIESAEKFTLQNDVLVLEISASGANVIDAKLLK---SLTAENKPV 116 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L + T YFA VS NN +LPN + + L+ P + N + Sbjct: 117 ELFQYTPTHK-YFARSGLVSLNNN-DLPNHTSTFKLVQSGKDGSGRPFAVFASERNGVRL 174 Query: 169 ERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGF 220 E+T L+ Y+ + VT ++ + I+R P + G Sbjct: 175 EKTFILNPGSYVVDVGHRVTQSTSNPNPLVLYTEIVRDASQEQKIGPFGGAFSANTFTGP 234 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFH----ESNSWLGISDKYWASVFIPSKETSFHSQFK 276 +A + + ++S I+K+ I+ +W+ + Y+AS +IP + + Sbjct: 235 VAYTDKEKFNKLEFSAIDKNKITIPTLVAAGEPAWIAMVQHYFASAWIPGDKVARDIYTG 294 Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 + +G Y+ + PG ++ LF G +E + P FE+L D+ Sbjct: 295 RIDNG--LYRIGMQTPLGMVGPGSTVVEKAKLFVGPQEERVLETIA-----PGFELLKDY 347 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 G+ +AKP+F L+ + VGN+G +I+L T+ +KL+FFPL+ Y S A MK +QP++ Sbjct: 348 GYLTILAKPIFWLLDNIHFYVGNWGWSIILLTILIKLVFFPLSAASYKSMARMKEVQPRL 407 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++E++K PQ L +AM+++Y+ INPL GC P+++QIPVF ++Y V+ S+E R A Sbjct: 408 VAMKEQYKG-EPQKLNQAMMEMYRKEKINPLGGCLPVVIQIPVFISLYWVLLSSVETRGA 466 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ WI DL+ DP I P+IM++SMF+Q K++P P D Q Sbjct: 467 PWILWIHDLSVPDPYY-------------------ILPVIMAVSMFVQTKLNPTPPDPIQ 507 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 A ++ +MP+VF FPAGL++YW +N++SI QQ I +M G + Sbjct: 508 AKVMMYMPIVFSVMFFFFPAGLVLYWVVNNLLSIAQQWQINQMFGKKP 555 >gi|323161043|gb|EFZ46962.1| inner membrane protein oxaA [Escherichia coli E128010] Length = 531 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 134/554 (24%), Positives = 242/554 (43%), Gaps = 52/554 (9%) Query: 19 YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78 WQ + ++ +Q Q + A D A + +K L Sbjct: 1 MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51 Query: 79 IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138 +IN +G + L Y ++S P L ++ + Y A+ N Sbjct: 52 DLTINTRGGDVEQALLPAYPKKLNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109 Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192 + + + + +A F +T L Y + V N Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169 Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245 + S G++ + T ++ F + A + K+ I + N Sbjct: 170 PLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTGAMN 287 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+ Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK +N Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y+ Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502 Query: 545 SNVISIVQQAVIMK 558 SN+++I+QQ +I + Sbjct: 503 SNLVTIIQQQLIYR 516 >gi|167560996|ref|ZP_02353912.1| putative inner membrane protein translocase component YidC [Burkholderia oklahomensis EO147] Length = 483 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 142/509 (27%), Positives = 226/509 (44%), Gaps = 44/509 (8%) Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP--IVTLLSPSNTKNA 119 + + V G I+ +G L L+ + P VTL + + Sbjct: 1 TAPAAQAQLVRFSTDVYDGEIDTRGGTLAKLTLKK---EGDGKQPDLFVTLFDHAEN-HT 56 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISL 174 Y A + + PN N V+ ++G L + + Sbjct: 57 YLARTGLL----GGDFPNHNDVYAQVAGPTSLSGDQNTLKLSFESPVKGGVKVVKTYTFT 112 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQK 233 Y+ + + N + + ++R T F G K + Sbjct: 113 RGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTPVETPLFSHTFLGPAVYTDQKHFQKIN 172 Query: 234 YSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 +SD++K+ N W+ + Y+AS +IP + Y+ Sbjct: 173 FSDVDKNKADYVASADNGWIAMVQHYFASAWIPQQGA--KRDIYVEKIDPTLYRVGVKQP 230 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 I PG+S + LFAG +E + P E++ D+GW IAKP+F L+ Sbjct: 231 VAAIAPGQSADVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEK 285 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+F +S PQ + Sbjct: 286 IHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMN 344 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 345 AALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYF 404 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I P++M++SMF+Q K++P P D QA ++ +MP+ F Sbjct: 405 -------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFF 445 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FPAGL++Y+ +NV+SI QQ I + G Sbjct: 446 FFPAGLVLYYVVNNVLSIAQQYYITRTLG 474 >gi|269468577|gb|EEZ80226.1| Preprotein translocase subunit YidC [uncultured SUP05 cluster bacterium] Length = 546 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 137/578 (23%), Positives = 241/578 (41%), Gaps = 54/578 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRI-----------------EEMNNERKNIQTV 43 M+ +F+ +A+ + I W + + + + T Sbjct: 1 MDNQK-FFLIVAIFLSIFLLWDKWEITHTVDTNGNLVRQTKTIEFDTPTPVQTQSQTPTQ 59 Query: 44 KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 Q A + A A+ P + L I+ KG + L Y ++ Sbjct: 60 DQDVPSITHTKARVDLPIAPAIQQHPHTTVSTDLLTVEISHKGGTVQNALLNAYPEELDG 119 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 L SN F + + +S + + ++ T + +K+ Sbjct: 120 IKKFQLL---SNKAGGLFQAQSGLLPQEQMPTHHSIFTSSNNNYQLNGETLTVPFKWKSD 176 Query: 164 NNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 N I + Y+ + VTNNS ++ S +++R+ + G Sbjct: 177 NGIEVVKNFHFKRGSYVITVDYVVTNNSNKELTLSSYTQLVRNALDESNMMMPTFTGGAK 236 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + ++ D W + Y+ + +IP + + ++ Sbjct: 237 FDDQDVYEKIEFDDFSSEP--KTTSKGGWTAMIQHYFFAAWIPDSDNTHSYSSSARNNN- 293 Query: 283 ARYQAKFSANEITILPGKSITT-TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 Y ++I PG + + L+ G KE I P + +D+G + Sbjct: 294 --YLLTVVNPNVSIAPGATTVLPGSDLYIGPKEQARIDSVA-----PGLDKTVDYGVLFI 346 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IAKP+ LM + Y++V ++G +I++ T+ +KL F+ L++K Y S A M+ + P++ +L+E Sbjct: 347 IAKPLSELMHWIYSIVNSWGWSIIILTILIKLAFYKLSEKSYRSMAGMRKLSPRLTKLKE 406 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + Q L + ++LYK INP +GC PIL+QIPVF ++Y V+ +E+R P + + Sbjct: 407 TYGDDK-QKLGQKTMELYKKEKINPASGCLPILVQIPVFISLYWVLLEMVELRQTP-FWY 464 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 + DL+A DP I PIIM +SMF+Q K++PPP D QA I+ Sbjct: 465 LADLSAQDPYY-------------------ILPIIMGVSMFVQQKLNPPPPDPMQAKIMM 505 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P VF FP+GL++YW +N++SI QQ VI K Sbjct: 506 SLPFVFTIFFLWFPSGLVLYWVVNNILSITQQWVINKR 543 >gi|327250848|gb|EGE62550.1| inner membrane protein oxaA [Escherichia coli STEC_7v] Length = 531 Score = 315 bits (805), Expect = 2e-83, Method: Composition-based stats. Identities = 134/554 (24%), Positives = 242/554 (43%), Gaps = 52/554 (9%) Query: 19 YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78 WQ + + +Q Q + A D A + +K L Sbjct: 1 MIWQAW---------EQDTNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51 Query: 79 IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138 +IN +G + L Y +++S P L ++ + Y A+ N Sbjct: 52 DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109 Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192 + + + + +A F +T L Y + V N Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169 Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245 + S G++ + T ++ F + A + K+ I + N Sbjct: 170 PLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQAGAMN 287 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+ Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK +N Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y+ Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502 Query: 545 SNVISIVQQAVIMK 558 SN+++I+QQ +I + Sbjct: 503 SNLVTIIQQQLIYR 516 >gi|323177717|gb|EFZ63301.1| inner membrane protein oxaA [Escherichia coli 1180] Length = 531 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 134/554 (24%), Positives = 243/554 (43%), Gaps = 52/554 (9%) Query: 19 YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78 WQ + ++ +Q Q + A D A + +K L Sbjct: 1 MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51 Query: 79 IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138 +IN +G + L Y +++S P L ++ + Y A+ N Sbjct: 52 DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109 Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192 + + + + +A F +T L Y + V N Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169 Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245 + S G++ + T ++ F + A + K+ I + N Sbjct: 170 PLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQPVLVQPGQTGAMN 287 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+ Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK +N Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QHISQEMMALYKAEKVN 401 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++Y+ Sbjct: 449 ------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502 Query: 545 SNVISIVQQAVIMK 558 SN+++I+QQ +I + Sbjct: 503 SNLVTIIQQQLIYR 516 >gi|190576475|ref|YP_001974320.1| putative inner membrane protein translocase component YidC [Stenotrophomonas maltophilia K279a] gi|254778166|sp|B2FPA5|OXAA_STRMK RecName: Full=Membrane protein oxaA gi|190014397|emb|CAQ48045.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a] Length = 571 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 143/589 (24%), Positives = 250/589 (42%), Gaps = 56/589 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID- 59 M + + + L V ++ W + + Q N A Sbjct: 1 MNQTRVFLIFAWLMVAVLL-WMEWSREKAAPTPAPTTTSAPAAAQSVPGANPGAIPSAQV 59 Query: 60 ----------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 +A A S RV + L ++ G + D L + SP V Sbjct: 60 PGAPGQAAAQAQASATPASQRVTVTTDVLRLVLD--GGRVLDAELLQFPQTKDEGSPPVR 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNAN 164 LL+ + + Y A + S N +P ++ + K I V+ N Sbjct: 118 LLT-EDPAHPYSAISGWASEDRNTPVPGADGFKLVGDTKDFVLAKGQNELQIPFVWTADN 176 Query: 165 NILFERTISLDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV----QEG 219 + +RT+++ + + D V+N + R + + G Sbjct: 177 GVTIKRTLTVSRNEYAVRFKDEVSNAGAAPWNGYVYRTLDRTPTILSRSMTNPDSFSFNG 236 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 DK + + D + N + + WL + ++ + +IP K+ + H ++ Sbjct: 237 ATWYDNDKKYQRRAFKDYLEDGTLNQNITGGWLAMLQHHFFTAWIPQKDQTAHYVLSQVA 296 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 R + T+ PG+S +T L+ G K I +P + ++D+ F Sbjct: 297 G---RDLIEARGPAFTVAPGQSTSTEARLWVGPKLVNLIAKE----DVPGLDRVVDYSRF 349 Query: 340 YFIA---KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 +A + +F +++ + LVGN+G AI+ V +KL+ +PL+ QY S A M+ QP+I Sbjct: 350 SMMAVIGQGLFWVLNQVHKLVGNWGWAIVGLVVLLKLVLYPLSATQYKSGAKMRRFQPRI 409 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +L+E++ Q Q AM++LYK INP+ GC PIL+Q+P+FFA+Y V+ S+E+R A Sbjct: 410 AQLKERYGD-DRQKFQTAMMELYKKEKINPMGGCLPILIQMPIFFALYWVLVESVELRQA 468 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKG 515 P++GWI+DL A DP I P+I M+ K++P P D Sbjct: 469 PWFGWIQDLTARDPYF-------------------ILPVINVAVMWFTQKLTPAPGMDPM 509 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q ++ +MP+VF ++ P+GL++YW + + ++QQ + K HG E Sbjct: 510 QQKMMQFMPLVFGVMMAFMPSGLVLYWVVNGGLGLLQQWWMTKRHGGEP 558 >gi|313647713|gb|EFS12161.1| inner membrane protein oxaA [Shigella flexneri 2a str. 2457T] Length = 531 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 133/554 (24%), Positives = 242/554 (43%), Gaps = 52/554 (9%) Query: 19 YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSL 78 WQ + ++ +Q Q + A D A + +K L Sbjct: 1 MIWQAW---------EQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVL 51 Query: 79 IGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNS 138 +IN +G + L Y +++S P L ++ + Y A+ N Sbjct: 52 DLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGLTGRDGPDNPANG 109 Query: 139 NTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSID 192 + + + + +A F +T L Y + V N Sbjct: 110 PRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEK 169 Query: 193 QIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNF 245 + S G++ + T ++ F + A + K+ I + N Sbjct: 170 PLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNI 229 Query: 246 HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 W+ + +Y+A+ +IP + + + F + G+ + + + + PG++ Sbjct: 230 SSKGGWVAMLQQYFATAWIPHNDGTNN--FYTANLGNGIVAIGYKSQPVLVQPGQTGAMN 287 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G +I+ Sbjct: 288 STLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSII 342 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + T V+ + +PL K QY S A M+ +QPKI +RE+ Q + + M+ LYK +N Sbjct: 343 IITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRISQEMMALYKAEKVN 401 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 PL GC+P+L+Q+P+F A+Y ++ S+E+R APF WI DL+A DP Sbjct: 402 PLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYY------------- 448 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I PI+M ++M KMSP D Q I+ +MPV+F FP+GL++Y+ Sbjct: 449 ------ILPILMGVTMLFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIV 502 Query: 545 SNVISIVQQAVIMK 558 SN+++I+QQ +I + Sbjct: 503 SNLVTIIQQQLIYR 516 >gi|325267553|ref|ZP_08134205.1| inner membrane protein OxaA [Kingella denitrificans ATCC 33394] gi|324980903|gb|EGC16563.1| inner membrane protein OxaA [Kingella denitrificans ATCC 33394] Length = 556 Score = 314 bits (804), Expect = 3e-83, Method: Composition-based stats. Identities = 135/588 (22%), Positives = 247/588 (42%), Gaps = 63/588 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 F+A ALS++I++ + Y P QPN + A Sbjct: 1 MDAKRLFIATALSMLILWGYGQMYPSP----------------QPNTAATATAQQAQVQA 44 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A L + + + ++ I+ K + L Y+ V L Y Sbjct: 45 ASPLGATSPITVNTDTVQAVIDEKSGDLRGMTLNQYNSAADEQQKFVLL--ADGKPLTYI 102 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL-F 180 A+ + V L + + T +KL + AN + ++ + ++ Sbjct: 103 AQSELVDANGKNWLEGLTFSSAQKNYTLSGDTLEVKLSAQAANGVNIDKVYTFRKNSYLV 162 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKP-QTATNTFG--VQEGFIAVLGDKSLVEQKYSDI 237 + V N I+ +++R F + + KYSD+ Sbjct: 163 NVRFDVKNTGSAPIQVGTNYQVVRDNSKPEGEGWFMSSYNGPVVYTPDSDEFQKVKYSDL 222 Query: 238 EKS-------SISNFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + + ++G+ Y+ S +I + + Sbjct: 223 DDDFQTGKDTAEYQRKATGGYVGMIQHYFVSAWIMQPQEGSNICEKAACTVNMKKRSDNL 282 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y + + + + G S + L+AG + + P+FE+ D+G + A Sbjct: 283 YSSGVNVAPVQVAAGSSQSFGAQLYAGPQITSILKTVS-----PKFELTKDYGRVHIFAA 337 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+++ ++L+ N+G AI++ T+ VK + +PL K Y S A M+ + PK++ L+ K Sbjct: 338 PLFALLNWLHSLINNWGWAIIVLTIIVKAILYPLNNKAYRSMAKMRTVAPKMEALK-KQY 396 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 LQ+AM++LY+ INPL GC P+L+Q+P+F +Y +I +S+E+R AP+ GWI D Sbjct: 397 GDDKMGLQQAMMKLYRDEKINPLGGCLPMLVQMPIFIGLYWMIFLSVELRQAPWLGWITD 456 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I PI+M+ +M+ Q ++PPP+D QA ++ MP Sbjct: 457 LSRPDPFF-------------------ILPILMAATMWFQTTLNPPPSDPTQAQMMKIMP 497 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK---MHGAEIGLIDR 569 ++F FPAGL++Y+ +N+++I QQ I + E ++D+ Sbjct: 498 LMFSVMFFFFPAGLVLYYVVNNLLTIAQQWHINRQSEKLATEPQVLDK 545 >gi|94987512|ref|YP_595445.1| preprotein translocase subunit YidC [Lawsonia intracellularis PHE/MN1-00] gi|259515698|sp|Q1MPF3|OXAA_LAWIP RecName: Full=Membrane protein oxaA gi|94731761|emb|CAJ55124.1| Preprotein translocase subunit YidC [Lawsonia intracellularis PHE/MN1-00] Length = 532 Score = 314 bits (803), Expect = 3e-83, Method: Composition-based stats. Identities = 148/568 (26%), Positives = 250/568 (44%), Gaps = 46/568 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME +AI LS+++ W +F Y + + +Q S A+ Sbjct: 1 MED-KRIVLAIILSLVVFLGWHSFAEYMGWISPKVQHVANERHSSVDQTATSNIALDSVQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + V ++ P I I+ G L+ Y +++ + SP+V L+SP ++ Sbjct: 60 SVFSPPTGKDVYIETPLYIAKIHSSGGILSSFILKKYKVNLDNTSPLVNLVSPEASQAMP 119 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGK-ILTPTTPIKLVFKNANNILFERTISLDEHYL 179 N + SN W+ + G L P +L F N + I Sbjct: 120 LGITL------NGQPSWSNGNWSFLGGDLYLKPGETKELTFVGIVNGVKIIRIFTFNADS 173 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + I + + S Q + ++ T + +A S E+ D K Sbjct: 174 YLIHEKLQLASEKQNSCPTKVGLLVAATPFGTGQYDP--TRMAWSIKDSFKEETSIDTLK 231 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 +W G+ Y+ +V S + + +D ++ + + I Sbjct: 232 EKGIQESGEFNWGGVMSNYFMNVVALSDPLYLTIKGRIQND---VWRVALERSNVLIPAE 288 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + + T + G K+ + + E ID+G F IAKP+ +++FY GN Sbjct: 289 GTTSITVNWWFGPKDRELLSRAPD-----KLENAIDFGMFSIIAKPLLTALTFFYEYTGN 343 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G+AI++ T+ +K++F+PL++K Y S MK +QP + +LREK+ L + ++QLY Sbjct: 344 WGVAIIVLTLCIKIVFWPLSQKSYNSMEQMKKLQPMMQKLREKYANDRDT-LNREIMQLY 402 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--------WIKDLAAADPT 471 KT+ +NP GC PILLQIPVF +Y+ + S+E+RHA F W+ DL+AADP Sbjct: 403 KTYKVNPAGGCLPILLQIPVFIGLYQALLNSIELRHATFIYYLPFTHLVWLADLSAADPF 462 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 I P++M SMF+Q K++P D Q I+ MP++F Sbjct: 463 Y-------------------ITPLLMGASMFLQQKLTPASGDPTQQKIMMVMPIIFTVMF 503 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +FPAGL+IYW ++N++SI QQ +++ Sbjct: 504 LNFPAGLVIYWLFNNLLSIGQQWWMLRK 531 >gi|78224744|ref|YP_386491.1| protein translocase subunit yidC [Geobacter metallireducens GS-15] gi|123570635|sp|Q39PQ8|OXAA_GEOMG RecName: Full=Inner membrane protein oxaA gi|78195999|gb|ABB33766.1| protein translocase subunit yidC [Geobacter metallireducens GS-15] Length = 536 Score = 314 bits (803), Expect = 3e-83, Method: Composition-based stats. Identities = 152/565 (26%), Positives = 250/565 (44%), Gaps = 36/565 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME +A+ LS++ Y + + P+ E + T QP S AAV Sbjct: 1 ME--KRALIAVILSIVFFYGYSALFPPPKKEAPAPSAQQAVTGSQPGAPQASVAAVPAPS 58 Query: 61 RAQAL---SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A + + ++ P + +G L L+ Y VTL+ + Sbjct: 59 PVPAAAVKAQQKEIAVETPDYTAVFSTQGGSLTRLVLKKYRETADLTGKHVTLVDERD-P 117 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 +AY + ++ +L A + + + Sbjct: 118 SAYTLSTRAAGIGLDPSALFVSSADSLTVEAGEEKKELAFTWISPAGVTVRKIYTFQGGN 177 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y +V N+ ++ + + + + G + L E+K D+ Sbjct: 178 YGIDMVYQTANSGTARVGAAFQTVMTYPAVPRVKESRLETFGPVTF-AQDKLTEEKVKDL 236 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 S + + W G +DKY+ S + + + + G +A E ++ Sbjct: 237 VGQGKS--YSAPLWSGFADKYFLSAVVGQGGSIATAAVRSTPRGMLEDTI--TAPETSLN 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PG+S + L+ G K+ + E ID GWF +AKP+ + +FY V Sbjct: 293 PGESKSVAYRLYFGPKDLDILKAQGNS-----LERAIDLGWFAMLAKPLLHSLKFFYKYV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+GIAI++ TV +K++F+PL Y S M+ +QPK+ E+REK+K + KA+++ Sbjct: 348 HNYGIAIIIITVILKIIFYPLTHSSYKSMKQMQKLQPKMQEVREKYKNDRD-AMNKAIME 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LY+TH +NP+ GC P+L+QIPVFFA+YK + S+E+RHAPF WI+DLA DP Sbjct: 407 LYQTHKVNPVGGCLPMLVQIPVFFALYKALMFSIELRHAPFMLWIQDLAGKDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 + PIIM ++M IQ KM+P D Q ++ +PVVF F +FP+G Sbjct: 462 --------------VTPIIMGITMVIQQKMTPSQMDPMQQKMMMALPVVFTFMFLNFPSG 507 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGA 562 L++YW +NV++I+QQ+ I K A Sbjct: 508 LVLYWLVNNVLTIIQQSYINKSIAA 532 >gi|312882242|ref|ZP_07741988.1| putative inner membrane protein translocase component YidC [Vibrio caribbenthicus ATCC BAA-2122] gi|309370086|gb|EFP97592.1| putative inner membrane protein translocase component YidC [Vibrio caribbenthicus ATCC BAA-2122] Length = 551 Score = 314 bits (803), Expect = 3e-83, Method: Composition-based stats. Identities = 145/580 (25%), Positives = 240/580 (41%), Gaps = 53/580 (9%) Query: 1 MERNWNYFVAIAL---SVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ N + I L S ++ WQ F P I+ V+ + + +A Sbjct: 1 MDSQRN-ILLIGLAMVSFLLFTKWQQFQDKPSQP--------IEQVQSSSALPVQNSADE 51 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 +D S + + +K L SI+ G +L Y + P V L Sbjct: 52 LDAAPVQTSSAKTISVKTDVLTLSIDTVGGDVVHADLNQYAEQMDKPDPFVLL--KDKPS 109 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKLVFKNANNILFERTISL 174 + + A+ + + + +K + I Sbjct: 110 HIFIAQSGLIGPQGVDLKTQRPAYLVNGDSFVLADGQDELSVPMTYKANGLEYTKTFIFK 169 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQK 233 Y + V N+S + + + T G D + Sbjct: 170 RGSYAIDVKYDVVNHSGSNATIGAYAHLRQTLLDDGGSITMPTYRGGAYSDQDTRYKKYS 229 Query: 234 YSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ------ 286 + D++ S+S W+ + Y+A+ +IP E + +S+ + Sbjct: 230 FDDMQDKSLSITLPDGKGWVAMIQHYFATAWIPRNEPDTKIYTRVVSNDNTFDPAQDNTV 289 Query: 287 --AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 TI G L+ G K + + ++++D+GW +FIAK Sbjct: 290 GDIGIRMPNKTIADGDKAQFLATLWVGPKLQDQMAEVADN-----LDLVVDYGWLWFIAK 344 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+ L+SY +N VGN+G AI+ T V+ +PL K QY S A M+ +QPK+ +RE+ Sbjct: 345 PLHSLLSYIHNFVGNWGFAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIG 404 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + + M++LYK +NPL GC P+LLQ+P+F A+Y + S+E+RH+PF+GWI D Sbjct: 405 D-DRQRMSQEMMELYKKEKVNPLGGCLPLLLQMPIFIALYWALMESVELRHSPFFGWITD 463 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+A DP I P++M SMF+ KMSP D Q I+ +M Sbjct: 464 LSAKDPYF-------------------ILPLLMGASMFMIQKMSPTTVTDPMQQKIMTFM 504 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 PV+F F FP+GL++YW SN+++++QQ +I K + Sbjct: 505 PVMFTFFFIFFPSGLVLYWLVSNIVTLIQQTLIYKSLEKK 544 >gi|218781967|ref|YP_002433285.1| YidC translocase/secretase [Desulfatibacillum alkenivorans AK-01] gi|218763351|gb|ACL05817.1| YidC translocase/secretase [Desulfatibacillum alkenivorans AK-01] Length = 559 Score = 313 bits (802), Expect = 4e-83, Method: Composition-based stats. Identities = 153/569 (26%), Positives = 265/569 (46%), Gaps = 25/569 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 + +A+ALS+++ A+Q F+ P E E + I V+Q + AA I Sbjct: 1 MEQFRLILAVALSLMVFIAYQYFFGPKPPQGETPVESQEIAQVQQSTEAHAQEAAAAITP 60 Query: 61 RAQALS----------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 A + + + P KGA DL L+ Y + +S + Sbjct: 61 APAAAPIPEIAASPGRPARDITVDTPLYHAVFTEKGAGLSDLTLKEYWETQAKDSAPKRV 120 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 + A + N+E + P + I + I+ + Sbjct: 121 V-DLPPGGATLLTTMARGSLGNLESAVFSAQSTEDLNVQEQPQSLIFTYTAPSGIIVTKT 179 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT-NTFGVQEGFIAVLGDKSL 229 + Y +V NN++ I + + + ++ + + F + + Sbjct: 180 YTFQPDSYAMDCQLSVANNTLGPINDNLSVILNNYYTPSSKPSDKSDRIVFSGPMAFVNN 239 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +++ EK W+ ++ +Y+ S + + + L+ + Q F Sbjct: 240 SMEEFKVSEKKPEKTIQGPTGWVALTWRYFMSAVVFDQTQEGVIKAS-LNSANNVAQTLF 298 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + + I PG++ TT+ F G K+ ++ E +D+G+F+ IAKP +L Sbjct: 299 TGKPMAIPPGQTFTTSYKAFFGPKQGDILNKA-------GLENALDFGFFHVIAKPCLLL 351 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M+ +N V N+G+ I+L T+ +K++ +PL K Y S MK +QP + ELREK+K Q Sbjct: 352 MNIMHNYVPNYGVVIILLTLLIKIVLWPLGSKSYRSMEKMKKLQPLMQELREKYKDDK-Q 410 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + + LYKT +NP+ GCWP+L+QIP+F A YK++ +++E+RH+PF WI DL+A D Sbjct: 411 KMNQEVFALYKTFKVNPMGGCWPMLIQIPIFIAFYKMLYVAIELRHSPFIWWITDLSAPD 470 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 +F L +PF + + + +IM SM +Q KMSPPP D QA ++ +P+VF+F Sbjct: 471 --RLFHLPFPVPFMAEPY-GIPVLTLIMGASMLLQQKMSPPPGDPTQAKMMMLLPLVFLF 527 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +FP+GL++YW +NV+SI QQ I K Sbjct: 528 IFINFPSGLVLYWLVNNVVSIAQQYYIGK 556 >gi|299068432|emb|CBJ39656.1| cytoplasmic insertase, essential for proper integration of ATPase into the membrane [Ralstonia solanacearum CMR15] Length = 553 Score = 313 bits (801), Expect = 5e-83, Method: Composition-based stats. Identities = 139/577 (24%), Positives = 239/577 (41%), Gaps = 49/577 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM--------------NNERKNIQTVKQP 46 M+ + + S+ +V + N+ + M + Sbjct: 1 MDI-KRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTATTTAAAPGGTPAGDVPQAA 59 Query: 47 NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 A S ++ + + +++ GA L L + Sbjct: 60 APAAAGSQAAPATGAVSQTPASEKIVVTTDVIRATVDTAGAVVTKLELL----TQKDHDG 115 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 +L + + Y A + + T + L Sbjct: 116 NPMVLFDHSLERTYLARSGLIG-GDFPNHTTVFTASAGPRDLGTGGEVSLTLTADKGGAK 174 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLG 225 L + + Y+ V N+ I + + R + + G Sbjct: 175 LAKTYVFKRGSYVIDTRFDVANDGAAPINPTLYMELARDGGAVEQSRFYSTFTGPAVYTD 234 Query: 226 DKSLVEQKYSDIEKSS-ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 + ++DI+K + W+ + Y+AS +IP+ ++ Sbjct: 235 GDKFHKITFADIDKGKAQVPAPTDSGWVAMVQHYFASAWIPAAN--VKREYYVNRVDTNF 292 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y+ T+ PG S++TT LFAG ++ + P +++ D+GW +AK Sbjct: 293 YRIGLQEPLGTVAPGASVSTTARLFAGPQQARMLEAIT-----PGLDLVKDYGWLTIVAK 347 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + L+GN+G +I+ TV +KL+FFPL+ Y S A MK++QP++ +RE+ K Sbjct: 348 PLFWLLEKIHALLGNWGWSIVALTVLIKLVFFPLSATSYRSMAKMKDLQPRMTAIRERHK 407 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 PQ + + M+ LY+T +NPL GC PI++QIPVF A+Y + S+EMR AP+ GW+ D Sbjct: 408 G-DPQKMNQEMMTLYRTEKVNPLGGCLPIMIQIPVFMALYWALLSSVEMRGAPWLGWVHD 466 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 LA+ DP I PI+M++SMF+Q +++P P D QA ++ +MP Sbjct: 467 LASPDPFY-------------------ILPILMAVSMFVQTRLNPTPPDPVQAKMMMFMP 507 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + F FPAGL++YW +N +SI QQ I +M G Sbjct: 508 IAFSVMFFFFPAGLVLYWVVNNCLSIAQQWSINRMLG 544 >gi|167843727|ref|ZP_02469235.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei B7210] Length = 499 Score = 313 bits (800), Expect = 7e-83, Method: Composition-based stats. Identities = 141/499 (28%), Positives = 220/499 (44%), Gaps = 42/499 (8%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNAYFAELDYVST 129 V G I+ +G L L P +++ L + Y A + Sbjct: 26 VRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPDLSVTLFDHTANHTYLARTGLL-- 80 Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISLDEHYLFKIVD 184 + PN N V+ ++G L + + Y+ + Sbjct: 81 --GGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDT 138 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 + N + S ++R T F G K + + DI+K+ Sbjct: 139 KIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKAD 198 Query: 244 NFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 N W+ + Y+AS +IP Y+ I PG+S Sbjct: 199 YVTSADNGWIAMVQHYFASAWIPQSGA--KRDIYVEKIDPTLYRVGVKQPVAAIAPGQSA 256 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G Sbjct: 257 DVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGW 311 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+F +S PQ + A+++LYKT Sbjct: 312 AIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMNAALMELYKTE 370 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 371 KVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYF---------- 420 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 421 ---------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYY 471 Query: 543 SWSNVISIVQQAVIMKMHG 561 +NV+SI QQ I + G Sbjct: 472 VVNNVLSIAQQYYITRTLG 490 >gi|254251055|ref|ZP_04944373.1| Preprotein translocase subunit YidC [Burkholderia dolosa AUO158] gi|124893664|gb|EAY67544.1| Preprotein translocase subunit YidC [Burkholderia dolosa AUO158] Length = 554 Score = 313 bits (800), Expect = 7e-83, Method: Composition-based stats. Identities = 149/579 (25%), Positives = 241/579 (41%), Gaps = 51/579 (8%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVD- 50 M+ I ++ WQ F+ T P + Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGTGATPTAGNV 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + A + + V+ G I+ +G L L+ + + Sbjct: 61 PAAAPGAAPTTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPD--LYIT 118 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT---PTTPIKLVFK---NAN 164 L + Y A + + PN N V+ + + +KL F+ Sbjct: 119 LFDHTAGHTYLARTGLL----GGDFPNHNDVYTEVGNGPTSLSGDQNTLKLSFESPVKGG 174 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAV 223 + + Y+ + + N + + ++R T F G Sbjct: 175 VKVVKTYTFTRGSYVIGVDTKIENVGTTPVTPTVYMELVRDNTAVETPMFSHTFLGPAVY 234 Query: 224 LGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 K + +SD++K+ N W+ + Y+AS +IP + Sbjct: 235 TDAKHFQKINFSDLDKNKADYVTSADNGWVAMVQHYFASAWIPQQG--VKRDIYAEKIDP 292 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 Y+ TI PG+S LFAG +E + P E++ D+GW I Sbjct: 293 TLYRVGVKQPVATIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTII 347 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+ Sbjct: 348 AKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRER 407 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 F +S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI Sbjct: 408 F-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWI 466 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL+ DP I P++M++SMF+Q K++P P D QA ++ + Sbjct: 467 HDLSQRDPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMF 507 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 508 MPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 546 >gi|319940691|ref|ZP_08015033.1| inner membrane protein oxaA [Sutterella wadsworthensis 3_1_45B] gi|319805842|gb|EFW02609.1| inner membrane protein oxaA [Sutterella wadsworthensis 3_1_45B] Length = 565 Score = 312 bits (799), Expect = 8e-83, Method: Composition-based stats. Identities = 137/575 (23%), Positives = 242/575 (42%), Gaps = 51/575 (8%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEE---MNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + + L + W N+ V+ E + V + A Sbjct: 7 RALLWVILFGSLFMLWDNYQVWKGGESFFGSVKQEAIEADRSAAAGVPTATVAKTAPALD 66 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS----------------SNSP 106 A ++ + + + + + GA+ + + N Sbjct: 67 DATAVKEPIVVTTDRMKVTFDRMGARIVGSEMLLFPQQADWTEVGLAGMVLGREPSPNLG 126 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 V L +AY A+ V + + + + + + Sbjct: 127 NVKLFDVEGG-HAYLAQTGLVG-GDYPTHNDEFKLVSQDLALGDKESMKVVFEADKGGLK 184 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH--KPQTATNTFGVQEGFIAVL 224 + + +Y + VTN + + ++ R KP ++ + G Sbjct: 185 VTKTFTFKRGYYGIDVDTAVTNTTDKAVTPQIYYQLTRDSSKPAGESSMYSTFTGPAFYT 244 Query: 225 GDKSLVEQKYSDIEKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 +++ + +S+I +N WL + ++ S ++P + H+ + L GH Sbjct: 245 DEENFQKLSFSEIRDKDAKYVEDTNNGWLAMVQHHFVSAWVPPQGEVRHNYTRAL--GHD 302 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 + + I PG + T L++G +E + P E+++D+GW F+A Sbjct: 303 LFAVGTLISLKEIAPGATQTNHAVLYSGPQEQARLEQLA-----PGLELVVDYGWLTFLA 357 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP++ L+ + Y +VGN+G AI+L T VK + +P++ Y S A MK + P++ L+EK+ Sbjct: 358 KPIYWLLDFLYGIVGNWGWAIVLLTCIVKAVLYPISAAGYRSMARMKEVTPRLKALQEKY 417 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K Q L +AM++LYKT INP+ GC PI+LQIPVF A+Y V+ S+E+R A + W+ Sbjct: 418 KDDK-QRLNQAMMELYKTEKINPVGGCLPIMLQIPVFLALYWVLQGSVELRGAEWILWVH 476 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DLA DP + P +M+ +MF+Q+ ++P P D QA ++ M Sbjct: 477 DLAMPDPWF-------------------VLPALMAATMFLQILLNPKPTDPMQAKVMYIM 517 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 PVVF F AGL++YW +N++SI QQ I K Sbjct: 518 PVVFSVMFFIFAAGLVLYWLTNNILSIAQQWWINK 552 >gi|258593684|emb|CBE70025.1| putative Inner membrane protein oxaA [NC10 bacterium 'Dutch sediment'] Length = 557 Score = 312 bits (799), Expect = 8e-83, Method: Composition-based stats. Identities = 127/571 (22%), Positives = 235/571 (41%), Gaps = 33/571 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M +A+AL+ +I++ Q P+ + ++E + V + S A+ Sbjct: 1 MSSQVRALLAVALATVILFGAQFLLPGPKESKESSEPSKQEAVGTATKSPTSPASKAPGP 60 Query: 61 RAQAL-------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + + ++ + + +G L+ Y +V L Sbjct: 61 LERPQVREVVPRAPEREAIVETDVVRAVLTSRGGALKSWRLKSYRAADGQGVDLVAL--- 117 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 L + + +S + + T I + + + + ++ Sbjct: 118 -QQGELPGPLLVSSGNPEEPAPLDFDIDKAEVSLRSPSETGSITFSSRGSGPLQLSKRLT 176 Query: 174 LDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 + Y ++ + N I +P + P + G + ++ Sbjct: 177 FKGNSYRVEVEFSWKNTGKKPITIAPE---IAWGPGFYSGVDGERAQVVSATSWVDGRRV 233 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 SW + + Y+A+ +P + S + Sbjct: 234 TDDLGSLKGAVTHSGQVSWTALQNLYFAAALLPEGKG---STATIRKGPEEQPVIALVTP 290 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 ++ PG +T +++G K+ ++ D ++D GWF +A+P L+ + Sbjct: 291 TQSLEPGGGLTQRVAVYSGPKDLDHLNAAGSD-----LSKIVDLGWFDALARPALHLLRF 345 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + GN+G+AI+L +V K++ PL K S MK +QPKI + E+ K +P Q Q Sbjct: 346 LNRISGNYGVAIILVSVLQKIVLHPLTAKSLRSMQAMKALQPKIAAISERNKNNP-QKKQ 404 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + ++ LYK H +NPL GC P+L+Q+P+F A+Y +S S+EM AP + WIKDL+ D Sbjct: 405 QEVMGLYKKHGVNPLGGCLPMLIQLPIFVALYNALSSSVEMWRAP-FLWIKDLSQPDALF 463 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWM-PVVFVFA 530 F ++G+ + + ++M SMF Q KMSPP + D QA ++ WM P +F F Sbjct: 464 AFDVWGLKDY------PFNLLALLMGASMFFQQKMSPPSSSDPQQAKLMLWMMPTMFTFM 517 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +FP+GL++YW SN++ + QQ + K Sbjct: 518 FWTFPSGLVLYWLVSNILQMGQQQWLQKRGK 548 >gi|294505626|ref|YP_003569688.1| membrane protein [Yersinia pestis Z176003] gi|262363791|gb|ACY60512.1| membrane protein [Yersinia pestis D106004] gi|262367727|gb|ACY64284.1| membrane protein [Yersinia pestis D182038] gi|294356085|gb|ADE66426.1| membrane protein [Yersinia pestis Z176003] Length = 529 Score = 312 bits (799), Expect = 8e-83, Method: Composition-based stats. Identities = 138/556 (24%), Positives = 241/556 (43%), Gaps = 54/556 (9%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AWQ + + N T + +Q + +K Sbjct: 1 MIWQAWQVDNNPQPTAQTTQQTTNTATGDKASQAVPGS------------GQGQLITVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 L +IN +G + NL Y + S++ L + Y A+ Sbjct: 49 DVLSLTINTRGGDIEQANLLAYPDTLGSSNTFELL--ETTPSFVYQAQSGLTGKNGPDNP 106 Query: 136 PNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLDEHYL-FKIVDTVTNN 189 N + + I L F + + +F +T L + + V N Sbjct: 107 ANGDRPLFEVPQTSFVLADGQDELRIPLTFTSKDGSVFIKTFVLKRNDYAIGVDYHVNNA 166 Query: 190 SIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSLVEQKY-SDIEKSSIS 243 S + + G++ + K T +N F +Q A +KY + Sbjct: 167 SAAPLELTLFGQLKQSINLPKKRDTGSNNFALQTYRGAAYSSDETKYKKYSFSDIEDKNL 226 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + W+ + +Y+A+ +IP+ + F G+ F + I PG+ Sbjct: 227 DITTKGGWVAMLQQYFATAWIPAANE--TNTFYSAELGNGLAAIGFKGAPVVIQPGEQKQ 284 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G + Sbjct: 285 LSATLWVGPEIQNKMAEIA-----PHLDLTVDYGWLWFISQPLFKLLKFIHSFVGNWGFS 339 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T V+ + +PL K QY S A M+ +QPK+ +RE+ Q + + M+ LYK Sbjct: 340 IIVITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAAMRERIGDDK-QRMSQEMMALYKAEK 398 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP Sbjct: 399 VNPLGGCLPLIIQMPIFLALYYMLMSSVELRHAPFILWIHDLSAQDPYY----------- 447 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I PI+M ++M+ KMSP D Q I+ +MPV+F FPAGL++Y+ Sbjct: 448 --------ILPILMGITMYFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPAGLVLYY 499 Query: 543 SWSNVISIVQQAVIMK 558 SN+++I+QQ +I + Sbjct: 500 IVSNLVTILQQQLIYR 515 >gi|107024094|ref|YP_622421.1| inner membrane protein translocase component YidC [Burkholderia cenocepacia AU 1054] gi|116691180|ref|YP_836803.1| putative inner membrane protein translocase component YidC [Burkholderia cenocepacia HI2424] gi|123071851|sp|Q1BSF7|OXAA_BURCA RecName: Full=Inner membrane protein oxaA gi|166975851|sp|A0KBN3|OXAA_BURCH RecName: Full=Inner membrane protein oxaA gi|105894283|gb|ABF77448.1| protein translocase subunit yidC [Burkholderia cenocepacia AU 1054] gi|116649269|gb|ABK09910.1| protein translocase subunit yidC [Burkholderia cenocepacia HI2424] Length = 552 Score = 312 bits (799), Expect = 8e-83, Method: Composition-based stats. Identities = 146/575 (25%), Positives = 237/575 (41%), Gaps = 44/575 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51 M+ I ++ WQ F+ T Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATHTAPAAAGGASGTSATTAGDVP 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + AA + + V+ G I+ +G L L+ P + + Sbjct: 61 AAAAGAAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLYIT 117 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILF 168 +T + + + + T N S + +KL F+ + Sbjct: 118 LFDHTAGHTYLARTGLLGGDFPNHNDVYTQLNPGSTSLTGDENTLKLSFESPVKGGVKVV 177 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDK 227 + Y+ + + N + + ++R T F G K Sbjct: 178 KTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAK 237 Query: 228 SLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + +SD++K+ + N W+ + Y+AS +IP + Y+ Sbjct: 238 HFQKIDFSDLDKNKANFEKSSDNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPTLYR 295 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 I PG+S LFAG +E + P E++ D+GW IAKP+ Sbjct: 296 VGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPL 350 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + VGN+G AI+L TV +K +FFPL+ Y S A MK I P++ LRE+F +S Sbjct: 351 FWLLEKIHGYVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KS 409 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ Sbjct: 410 DPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLS 469 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP I P++M++SMF+Q ++P P D QA ++ +MP+ Sbjct: 470 QRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIA 510 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 511 FSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 545 >gi|206558829|ref|YP_002229589.1| putative inner membrane protein translocase component YidC [Burkholderia cenocepacia J2315] gi|254772759|sp|B4E7D5|OXAA_BURCJ RecName: Full=Inner membrane protein oxaA gi|198034866|emb|CAR50738.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 552 Score = 312 bits (799), Expect = 1e-82, Method: Composition-based stats. Identities = 147/575 (25%), Positives = 238/575 (41%), Gaps = 44/575 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51 M+ I ++ WQ F+ T Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATHTAPAAAGGASGTGATTAGDVP 60 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + AA + + V+ G I+ +G L L+ P + + Sbjct: 61 AAAAGAAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLYIT 117 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILF 168 +T + + + + T N S + +KL F+ + Sbjct: 118 LFDHTAGHTYLARTGLLGGDFPNHNDVYTQLNPGSTSLTGDQNTLKLSFESPVKGGVKVV 177 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDK 227 + Y+ + + N + + ++R T F G K Sbjct: 178 KTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAK 237 Query: 228 SLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + +SD++K+ + N W+ + Y+AS +IP + A Y+ Sbjct: 238 HFQKIDFSDLDKNKANFEKSADNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPALYR 295 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 I PG+S LFAG +E + P E++ D+GW IAKP+ Sbjct: 296 VGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPL 350 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+ + VGN+G AI+L TV +K +FFPL+ Y S A MK I P++ LRE+F +S Sbjct: 351 FWLLEKIHGYVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KS 409 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ Sbjct: 410 DPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLS 469 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP I P++M++SMF+Q ++P P D QA ++ +MP+ Sbjct: 470 QRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIA 510 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 511 FSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 545 >gi|261378187|ref|ZP_05982760.1| membrane protein insertase, YidC/Oxa1 family [Neisseria cinerea ATCC 14685] gi|269145655|gb|EEZ72073.1| membrane protein insertase, YidC/Oxa1 family [Neisseria cinerea ATCC 14685] Length = 545 Score = 312 bits (798), Expect = 1e-82, Method: Composition-based stats. Identities = 139/575 (24%), Positives = 244/575 (42%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q V + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K + L Y + N P TL + S Y Sbjct: 56 ----------ITVTTDTVKAVIDEKSGDLRQMTLLKYKANGDENKPF-TLFNDSKEY-TY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L N + ++L N + ++ + + YL Sbjct: 104 VAQSELLDAQGNNILKGVNFTAAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237 + +TN S S RI+R + + + G + + + +SD+ Sbjct: 164 VNVRFDITNTSGKPANLSADYRIVRDRSEPEGQGYFTRSFVGPVVYTPEGKFQKVNFSDL 223 Query: 238 EKSSISNFHE-------SNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S +E WLG+ + ++ S +I + + Sbjct: 224 DDDAKSGKNEAEYARKTQTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDNL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y S I G + L+AG + I + + ++ D+G ++ A Sbjct: 284 YSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ +DP I P+IM+++MF Q ++PPP D QA ++ MP Sbjct: 458 LSRSDPYY-------------------ILPVIMAVTMFAQTFLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSAMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 533 >gi|323143418|ref|ZP_08078103.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain [Succinatimonas hippei YIT 12066] gi|322416823|gb|EFY07472.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain [Succinatimonas hippei YIT 12066] Length = 548 Score = 312 bits (798), Expect = 1e-82, Method: Composition-based stats. Identities = 129/533 (24%), Positives = 230/533 (43%), Gaps = 38/533 (7%) Query: 44 KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 + + A + + A + +++K+ +L +++LKG D L ++ Sbjct: 30 AAVSAEQAAQAEIFNNSIAASEGAGKLIKIKSDALELTVDLKGGDIVDAKLCKVKQELGK 89 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 + P L+S N + L ++ P T N T + L F+ Sbjct: 90 DDPFHLLMSEPNFVYLAQSGLTGKDGPDSKVRPTFTTDANEYVLADGEDTLSVNLTFEQD 149 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + + Y+ + V NNS + + G++ + + G Sbjct: 150 GVTYVKTYTLNRDSYVVDVSYKVVNNSGKDLSMAFYGQLKQTVDVSQQQNSGAFGMVAGA 209 Query: 224 L-------GDKSLVEQKYSD----IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 ++ + D ++ N W+ + Y+ + +I + + Sbjct: 210 YRGSAYSTDSTRYEKETFDDLVDLSKEKQNLNVQTKGGWVAMIQHYFVASWIGDTDENVE 269 Query: 273 SQFKYLSDGHARY-QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 + S R I G + ++ G K + +L P + Sbjct: 270 NVIYSNSSNADRDAIIGIRTEPTVIQNGSEHDFKSKMWIGPKNQDNM-----ELVAPNLD 324 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + +D+GW +FI+ P+F ++ + ++ +GN+G +I++ T+ V+ + FPL K QY S A M+ Sbjct: 325 LTVDYGWLWFISIPLFKILEFIHSYIGNWGFSIIVLTLVVRSVLFPLTKAQYTSMAKMRL 384 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + PK+ ELRE++K Q L + ++LYKT +NPL GC+P+L+Q+P+F A+Y + S Sbjct: 385 LTPKMQELRERYKD-DRQKLGQETMRLYKTEKVNPLGGCFPLLIQMPIFIALYWTLMEST 443 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+RHAPF GWI DL+ DP + P++ ++M+ KMSP P Sbjct: 444 ELRHAPFIGWIADLSVHDPYF-------------------VTPLLYGVTMYFIQKMSPTP 484 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D Q ++ MP VF F +FPAGL +YW SN +I QQ +I K + Sbjct: 485 ITDPMQRKVMMAMPFVFTFMFCTFPAGLTLYWLVSNCFTIFQQIIIYKSLEKK 537 >gi|167568260|ref|ZP_02361134.1| putative inner membrane protein translocase component YidC [Burkholderia oklahomensis C6786] Length = 497 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 220/500 (44%), Gaps = 40/500 (8%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 V G I+ +G L L+ + L + Y A + Sbjct: 22 QLVRFSTDVYDGEIDTRGGTLAKLTLKK--EGDGKQPDLFVTLFDHAANHTYLARTGLL- 78 Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISLDEHYLFKIV 183 + PN N V+ ++G L + + Y+ + Sbjct: 79 ---GGDFPNHNDVYAQVAGPTSLSGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVD 135 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 + N + + ++R T F G K + +SD++K+ Sbjct: 136 TKIDNVGTAPVTPTVYMELVRDNTPVETPLFSHTFLGPAVYTDQKHFQKINFSDVDKNKA 195 Query: 243 SNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 N W+ + Y+AS +IP + Y+ I PG+S Sbjct: 196 DYVTSADNGWIAMVQHYFASAWIPQQGA--KRDIYVEKIDPTLYRVGVKQPVAAIAPGQS 253 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G Sbjct: 254 ADVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWG 308 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+F +S PQ + A+++LYKT Sbjct: 309 WAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMNAALMELYKT 367 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 368 EKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYF--------- 418 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 I P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y Sbjct: 419 ----------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLY 468 Query: 542 WSWSNVISIVQQAVIMKMHG 561 + +NV+SI QQ I + G Sbjct: 469 YVVNNVLSIAQQYYITRTLG 488 >gi|53724898|ref|YP_104854.1| inner membrane protein translocase component YidC [Burkholderia mallei ATCC 23344] gi|67639597|ref|ZP_00438442.1| inner membrane protein, 60 kDa [Burkholderia mallei GB8 horse 4] gi|121600195|ref|YP_994138.1| putative inner membrane protein translocase component YidC [Burkholderia mallei SAVP1] gi|124386283|ref|YP_001028205.1| putative inner membrane protein translocase component YidC [Burkholderia mallei NCTC 10229] gi|126451415|ref|YP_001083056.1| putative inner membrane protein translocase component YidC [Burkholderia mallei NCTC 10247] gi|167001176|ref|ZP_02266975.1| membrane protein OxaA [Burkholderia mallei PRL-20] gi|254174811|ref|ZP_04881472.1| inner membrane protein, 60 kDa [Burkholderia mallei ATCC 10399] gi|254201964|ref|ZP_04908328.1| membrane protein OxaA [Burkholderia mallei FMH] gi|254207296|ref|ZP_04913647.1| membrane protein OxaA [Burkholderia mallei JHU] gi|254359605|ref|ZP_04975876.1| membrane protein OxaA [Burkholderia mallei 2002721280] gi|81684886|sp|Q62EM4|OXAA_BURMA RecName: Full=Inner membrane protein oxaA gi|166975852|sp|A3MS20|OXAA_BURM7 RecName: Full=Inner membrane protein oxaA gi|166975853|sp|A2S8D6|OXAA_BURM9 RecName: Full=Inner membrane protein oxaA gi|166975854|sp|A1V7D5|OXAA_BURMS RecName: Full=Inner membrane protein oxaA gi|52428321|gb|AAU48914.1| inner membrane protein, 60 kDa [Burkholderia mallei ATCC 23344] gi|121229005|gb|ABM51523.1| inner membrane protein, 60 kDa [Burkholderia mallei SAVP1] gi|124294303|gb|ABN03572.1| inner membrane protein, 60 kDa [Burkholderia mallei NCTC 10229] gi|126244285|gb|ABO07378.1| inner membrane protein, 60 kDa [Burkholderia mallei NCTC 10247] gi|147747858|gb|EDK54934.1| membrane protein OxaA [Burkholderia mallei FMH] gi|147752838|gb|EDK59904.1| membrane protein OxaA [Burkholderia mallei JHU] gi|148028819|gb|EDK86751.1| membrane protein OxaA [Burkholderia mallei 2002721280] gi|160695856|gb|EDP85826.1| inner membrane protein, 60 kDa [Burkholderia mallei ATCC 10399] gi|238520165|gb|EEP83627.1| inner membrane protein, 60 kDa [Burkholderia mallei GB8 horse 4] gi|243063003|gb|EES45189.1| membrane protein OxaA [Burkholderia mallei PRL-20] Length = 558 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 150/583 (25%), Positives = 240/583 (41%), Gaps = 56/583 (9%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + N + N + + +A Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA 60 Query: 59 DDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + A + V G I+ +G L L P Sbjct: 61 ANALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQP 117 Query: 107 IVTL-LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN--- 162 +++ L + Y A + + PN N V+ ++G L Sbjct: 118 DLSVTLFDHTANHTYLARTGLL----GGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESP 173 Query: 163 --ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEG 219 + + Y+ + + N + S ++R T F G Sbjct: 174 VKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLG 233 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 K + + DI+K+ N W+ + Y+AS +IP Sbjct: 234 PAVYTDQKHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGA--KRDIYVE 291 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 Y+ I PG+S + LFAG +E + P E++ D+GW Sbjct: 292 KIDPTLYRVGVKQPVEAIAPGQSADVSARLFAGPEEERMLEGIA-----PGLELVKDYGW 346 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IAKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ Sbjct: 347 VTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQA 406 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 LRE+F +S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ Sbjct: 407 LRERF-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPW 465 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DL+ DP I P++M++SMF+Q K++P P D QA Sbjct: 466 VLWIHDLSQRDPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAK 506 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 507 MMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 549 >gi|126439633|ref|YP_001057148.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 668] gi|166975856|sp|A3N477|OXAA_BURP6 RecName: Full=Inner membrane protein oxaA gi|126219126|gb|ABN82632.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 668] Length = 558 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 150/583 (25%), Positives = 239/583 (40%), Gaps = 56/583 (9%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + N + N + + A Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGANAAAA 60 Query: 59 DDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + A + V G I+ +G L L P Sbjct: 61 ANALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQP 117 Query: 107 IVTL-LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN--- 162 +++ L + Y A + + PN N V+ ++G L Sbjct: 118 DLSVTLFDHTANHTYLARTGLL----GGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESP 173 Query: 163 --ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEG 219 + + Y+ + + N + S ++R T F G Sbjct: 174 VKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLG 233 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 K + + DI+K+ N W+ + Y+AS +IP Sbjct: 234 PAVYTDQKHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGA--KRDIYVE 291 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 Y+ I PG+S + LFAG +E + P E++ D+GW Sbjct: 292 KIDPTLYRVGVKQPVAAIAPGQSADVSARLFAGPEEERMLEGIA-----PGLELVKDYGW 346 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IAKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ Sbjct: 347 VTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQA 406 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 LRE+F +S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ Sbjct: 407 LRERF-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPW 465 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DL+ DP I P++M++SMF+Q K++P P D QA Sbjct: 466 VLWIHDLSQRDPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAK 506 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 507 MMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 549 >gi|53717718|ref|YP_106704.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei K96243] gi|76811170|ref|YP_331720.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 1710b] gi|126453447|ref|YP_001064392.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 1106a] gi|167813580|ref|ZP_02445260.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 91] gi|167892205|ref|ZP_02479607.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 7894] gi|167900716|ref|ZP_02487921.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei NCTC 13177] gi|167916975|ref|ZP_02504066.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei BCC215] gi|217423939|ref|ZP_03455439.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 576] gi|226193291|ref|ZP_03788901.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei Pakistan 9] gi|237810283|ref|YP_002894734.1| inner membrane protein OxaA [Burkholderia pseudomallei MSHR346] gi|242316035|ref|ZP_04815051.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 1106b] gi|254184152|ref|ZP_04890743.1| membrane protein OxaA [Burkholderia pseudomallei 1655] gi|254186623|ref|ZP_04893140.1| membrane protein OxaA [Burkholderia pseudomallei Pasteur 52237] gi|254194722|ref|ZP_04901153.1| membrane protein OxaA [Burkholderia pseudomallei S13] gi|254262072|ref|ZP_04953126.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 1710a] gi|254298582|ref|ZP_04966033.1| membrane protein OxaA [Burkholderia pseudomallei 406e] gi|81690513|sp|Q63YW1|OXAA_BURPS RecName: Full=Inner membrane protein oxaA gi|123600731|sp|Q3JXI3|OXAA_BURP1 RecName: Full=Inner membrane protein oxaA gi|166975855|sp|A3NPX1|OXAA_BURP0 RecName: Full=Inner membrane protein oxaA gi|52208132|emb|CAH34062.1| putative membrane protein [Burkholderia pseudomallei K96243] gi|76580623|gb|ABA50098.1| inner membrane protein, 60 kDa [Burkholderia pseudomallei 1710b] gi|126227089|gb|ABN90629.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 1106a] gi|157808712|gb|EDO85882.1| membrane protein OxaA [Burkholderia pseudomallei 406e] gi|157934308|gb|EDO89978.1| membrane protein OxaA [Burkholderia pseudomallei Pasteur 52237] gi|169651472|gb|EDS84165.1| membrane protein OxaA [Burkholderia pseudomallei S13] gi|184214684|gb|EDU11727.1| membrane protein OxaA [Burkholderia pseudomallei 1655] gi|217393002|gb|EEC33024.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 576] gi|225934891|gb|EEH30868.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei Pakistan 9] gi|237503961|gb|ACQ96279.1| inner membrane protein OxaA [Burkholderia pseudomallei MSHR346] gi|242139274|gb|EES25676.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 1106b] gi|254220761|gb|EET10145.1| membrane protein insertase, YidC/Oxa1 family [Burkholderia pseudomallei 1710a] Length = 558 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 150/583 (25%), Positives = 240/583 (41%), Gaps = 56/583 (9%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + N + N + + +A Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA 60 Query: 59 DDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + A + V G I+ +G L L P Sbjct: 61 ANALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQP 117 Query: 107 IVTL-LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN--- 162 +++ L + Y A + + PN N V+ ++G L Sbjct: 118 DLSVTLFDHTANHTYLARTGLL----GGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESP 173 Query: 163 --ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEG 219 + + Y+ + + N + S ++R T F G Sbjct: 174 VKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLG 233 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 K + + DI+K+ N W+ + Y+AS +IP Sbjct: 234 PAVYTDQKHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGA--KRDIYVE 291 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 Y+ I PG+S + LFAG +E + P E++ D+GW Sbjct: 292 KIDPTLYRVGVKQPVAAIAPGQSADVSARLFAGPEEERMLEGIA-----PGLELVKDYGW 346 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IAKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ Sbjct: 347 VTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQA 406 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 LRE+F +S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ Sbjct: 407 LRERF-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPW 465 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DL+ DP I P++M++SMF+Q K++P P D QA Sbjct: 466 VLWIHDLSQRDPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAK 506 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++ +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 507 MMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 549 >gi|317484430|ref|ZP_07943344.1| YidC/Oxa1 family membrane protein insertase [Bilophila wadsworthia 3_1_6] gi|316924318|gb|EFV45490.1| YidC/Oxa1 family membrane protein insertase [Bilophila wadsworthia 3_1_6] Length = 534 Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats. Identities = 132/568 (23%), Positives = 233/568 (41%), Gaps = 44/568 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ F+AIAL++ ++ AW + + Q A Sbjct: 1 MDD-KRTFLAIALAIAVLLAWTPLAEHMGWIQPQQRPAATQEATPAPAPAAQTAVAPASS 59 Query: 61 -RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 S V+++ P I G L+ Y + ++SP V L+SP ++ A Sbjct: 60 LPVFTPSAGTDVKVETPLYSAVIYSGGGILRSFTLKHYDETIKADSPKVNLISPEASQTA 119 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 + + + + R IS + Sbjct: 120 PLGLTV----NGQPSWSTGQWSFQGSDLNLKAGEQGSLTFTGIVDGVRVTRVISFNADNY 175 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + + ++ R G + P + +A ++S E+ + Sbjct: 176 LLSENILVGSADQAPRTVRLGFTVAATPFSNGKY---DPTRLAWDANESFKEETSASTLA 232 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 +W G+ Y+ +V P+ + K G A + +T G Sbjct: 233 EKGIIEQGVFNWAGVMSNYFMNVTAPAD--PNNLTLKGRVQGDVWRLALERPDLLTPSNG 290 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + + G K+ + +++G F IA+P+ ++++F++ VGN Sbjct: 291 GEVPVAVNWWFGPKDRTMLATAPD-----HLSQAVNFGMFSIIARPLLTILAFFHSFVGN 345 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +GIAI++ T ++++F+PL++K + S MK +QP + +LREK K L K M+QLY Sbjct: 346 WGIAILMLTFCIRVVFWPLSQKSFKSMEQMKKLQPMMKKLREKHKDDKE-ALNKEMMQLY 404 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP--------FWGWIKDLAAADPT 471 KT+ +NP GC PI++QIPVF +Y+ + S+E+RHA W+ DL+AADP Sbjct: 405 KTYKVNPAGGCLPIVVQIPVFIGLYQALLNSIELRHASFIEYLPFTHITWLADLSAADPF 464 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 I P++M SMF+Q +++P D Q ++ +MPV+F Sbjct: 465 Y-------------------ITPLLMGASMFLQQRLTPAAGDPTQQKVMMFMPVIFTVMF 505 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +FPAGL+IYW +N++SI QQ +++ Sbjct: 506 INFPAGLVIYWLCNNILSIGQQWWMLRK 533 >gi|213650173|ref|ZP_03380226.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 484 Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats. Identities = 128/498 (25%), Positives = 228/498 (45%), Gaps = 43/498 (8%) Query: 75 NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE 134 L +IN +G + L Y ++ SN P L + + Y A+ Sbjct: 1 TDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIYQAQSGLTGRDGPDN 58 Query: 135 LPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTN 188 N + + + + +A F +T Y + +V N Sbjct: 59 PANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFKRGDYAVNVNYSVQN 118 Query: 189 NSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSS 241 + S G++ + T ++ F + A + K+ I + Sbjct: 119 TGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNE 178 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 N W+ + +Y+A+ +IP + + + F + G+ + A + + PG++ Sbjct: 179 NLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAIGYKAQPVLVQPGQT 236 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 T+ L+ G + + P ++ +D+GW +FI++P+F L+ + ++ VGN+G Sbjct: 237 GAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWG 291 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Q + M+ LYK Sbjct: 292 FSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QRQSQEMMALYKA 350 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP Sbjct: 351 EKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSAQDPYY--------- 401 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLII 540 I PI+M ++MF KMSP D Q I+ +MPV+F FP+GL++ Sbjct: 402 ----------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVL 451 Query: 541 YWSWSNVISIVQQAVIMK 558 Y+ SN+++I+QQ +I + Sbjct: 452 YYIVSNLVTIIQQQLIYR 469 >gi|218885990|ref|YP_002435311.1| hypothetical protein DvMF_0888 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|259515682|sp|B8DP11|OXAA_DESVM RecName: Full=Inner membrane protein oxaA gi|218756944|gb|ACL07843.1| 60 kDa inner membrane insertion protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 539 Score = 310 bits (794), Expect = 4e-82, Method: Composition-based stats. Identities = 134/576 (23%), Positives = 232/576 (40%), Gaps = 56/576 (9%) Query: 2 ERNWNYFVAIALSVIIVYAWQN------FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 + +AIALS +++ W + P + E + P + A Sbjct: 1 MESKRAIIAIALSFVVLVGWSYLADHMGWNGQPAPQAQQEETAPSASQAAPQSASQAAAP 60 Query: 56 VL-IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + S V + P ++ G +L Y +++ +P V ++ + Sbjct: 61 APRAETPVFLPSAGREVTVVTPLYKAVLHSGGGVLKHFSLTRYRTAITAGAPAVDMVDTA 120 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI---KLVFKNANNILFERT 171 +T + L N + + W+ G + + + Sbjct: 121 STVMSPLGLLI------NGQPSWNTGQWSFDGGDLSLGAGQSGVLTFTGEVDGVRVVREL 174 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 + YL + + + G + + + + Sbjct: 175 TFSADTYLISEKVRLAPLADARTVR--LGFTVGTGNLSPNGGQYDHTRVAWLHDGSFSEK 232 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 SD+ + SW + Y+ P T + K Y+ Sbjct: 233 TSASDL--EKGVLETGALSWGAVMSNYFLVAAAPVDTTGVTLKGKLQEG---VYRVAMER 287 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 +++I G T + G K+ + I+ GWF IA+P+ ++ Sbjct: 288 GDVSIPAGGETTVACNYWFGPKDRGLLKEAPNQ-----LAEAINLGWFSIIARPLVDMLE 342 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 +F+ VGN+G+AI+L TV +KL+F+PL+ K Y S MK +QP + +LREK ++ Sbjct: 343 FFHKYVGNYGVAIILLTVVIKLVFWPLSHKSYKSMEQMKKLQPMLQKLREKHGDDREKM- 401 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIK 463 + M++LYKT+ +NP GC P+L+QIPVFF +Y+ + ++E+RHA F W+ Sbjct: 402 NEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHASFITHLPFTDMVWLA 461 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+A DP I PI+M +M +Q K++P P D QA I+ +M Sbjct: 462 DLSAKDPYY-------------------ITPIVMGATMLLQQKLTPAPGDPTQAKIMMFM 502 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 PVVF F SFP+GL++YW +NV+SI QQ +++ Sbjct: 503 PVVFTFMFLSFPSGLVVYWLCNNVLSIAQQWWMLRK 538 >gi|170734513|ref|YP_001766460.1| putative inner membrane protein translocase component YidC [Burkholderia cenocepacia MC0-3] gi|254772758|sp|B1K0Y4|OXAA_BURCC RecName: Full=Inner membrane protein oxaA gi|169817755|gb|ACA92338.1| 60 kDa inner membrane insertion protein [Burkholderia cenocepacia MC0-3] Length = 553 Score = 310 bits (794), Expect = 4e-82, Method: Composition-based stats. Identities = 146/576 (25%), Positives = 240/576 (41%), Gaps = 45/576 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNE--------RKNIQTVKQPNQVD 50 M+ I ++ WQ + P + + + Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATHTAPAAAGGASGTGATTTAGDV 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + AA + + V+ G I+ +G L L+ P + + Sbjct: 61 PAAAAGAAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLYI 117 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNIL 167 +T + + + + T N S + +KL F+ + Sbjct: 118 TLFDHTAGHTYLARTGLLGGDFPNHNDVYTQLNPGSTSLTGDQNTLKLSFESPVKGGVKV 177 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGD 226 + Y+ + + N + + ++R T F G Sbjct: 178 VKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDA 237 Query: 227 KSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 K + +SD++K+ + N W+ + Y+AS +IP + A Y Sbjct: 238 KHFQKIDFSDLDKNKANFEKSADNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPALY 295 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + I PG+S LFAG +E + P E++ D+GW IAKP Sbjct: 296 RVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKP 350 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + VGN+G AI+L TV +K +FFPL+ Y S A MK I P++ LRE+F + Sbjct: 351 LFWLLEKIHGYVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-K 409 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL Sbjct: 410 SDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDL 469 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 + DP I P++M++SMF+Q ++P P D QA ++ +MP+ Sbjct: 470 SQRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPI 510 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 511 AFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 546 >gi|167834935|ref|ZP_02461818.1| putative inner membrane protein translocase component YidC [Burkholderia thailandensis MSMB43] Length = 489 Score = 310 bits (794), Expect = 4e-82, Method: Composition-based stats. Identities = 139/504 (27%), Positives = 219/504 (43%), Gaps = 34/504 (6%) Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNAY 120 + + V G I+ +G L L P +++ L + + Y Sbjct: 7 DAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPDLSVTLFDNAANHTY 63 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A + V S + + +T + Y+ Sbjct: 64 LARTGLLGGDFPNHNDIYAQVAGPTSLSAGQNALKLSFESPVKGGVKVVKTYTFTRGSYV 123 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIE 238 + + N + S ++R T F G K + +SDI+ Sbjct: 124 IGVDTKIENVGTTPVTPSVYMELVRDNTSVETPMFSHTFLGPAVYTDQKHFQKITFSDID 183 Query: 239 KSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 K+ N W+ + Y+AS +IP Y+ I Sbjct: 184 KNKADYVPSADNGWIAMVQHYFASAWIPQAGA--KRDIYVEKIDPTLYRVGVKQPVAAIA 241 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 PG+S + LFAG +E + P E++ D+GW IAKP+F L+ + V Sbjct: 242 PGQSADVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFV 296 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+F +S PQ + A+++ Sbjct: 297 GNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMNAALME 355 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 356 LYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYF----- 410 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 I P++M++SMF+Q K++P P D QA ++ +MP+ F FPAG Sbjct: 411 --------------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAG 456 Query: 538 LIIYWSWSNVISIVQQAVIMKMHG 561 L++Y+ +NV+SI QQ I + G Sbjct: 457 LVLYYVVNNVLSIAQQYYITRTLG 480 >gi|325139560|gb|EGC62100.1| inner membrane protein OxaA [Neisseria meningitidis CU385] Length = 545 Score = 310 bits (793), Expect = 5e-82, Method: Composition-based stats. Identities = 139/575 (24%), Positives = 243/575 (42%), Gaps = 58/575 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A++++I+ W+ + P+ + Q V + + A Sbjct: 1 MDF-KRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTASAEAALAPATP---- 55 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K + L Y + + N P L + + Y Sbjct: 56 ----------ITVTTDTVKAVIDEKSGDLRQMTLLKYKANGNENKPFS--LFDDSKEYTY 103 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L N + ++L N + ++ + + YL Sbjct: 104 VAQSELLDAQGNNILKGVNFTAAQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKDSYL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDI 237 + +TN S S RI+R Q + G + + + +SD+ Sbjct: 164 VNVRFDITNTSGKPANLSADYRIVRDHSQPEGQGYFTRSYLGPVVYTPEDKFQKVSFSDL 223 Query: 238 EKSSISNFHE-------SNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + S +E WLG+ + ++ S +I + + Sbjct: 224 DDDAKSGKNEAEYARKTQTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDIKRRNDNL 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y S I G + L+AG + I + + ++ D+G ++ A Sbjct: 284 YSTSVSVPLAAIQNGTKSEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFAS 338 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Sbjct: 339 PLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYG 398 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI D Sbjct: 399 D-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITD 457 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ +DP I PIIM+++MF Q ++PPP D QA ++ MP Sbjct: 458 LSRSDPYY-------------------ILPIIMAVTMFAQTFLNPPPTDPMQAKMMKIMP 498 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF FPAGL++YW +N+++I QQ I + Sbjct: 499 LVFSVMFFFFPAGLVLYWVVNNLLTITQQWHINRS 533 >gi|303247340|ref|ZP_07333613.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio fructosovorans JJ] gi|302491254|gb|EFL51143.1| membrane protein insertase, YidC/Oxa1 family [Desulfovibrio fructosovorans JJ] Length = 537 Score = 310 bits (793), Expect = 5e-82, Method: Composition-based stats. Identities = 148/556 (26%), Positives = 239/556 (42%), Gaps = 53/556 (9%) Query: 20 AWQNFYVYPRIEEMNNERKNIQTVKQPNQVD---NSYAAVLIDDRAQALSMSPRVELKNP 76 W + Q + A A A + + + P Sbjct: 19 GWNFLFPTKPPVPKTETTTQTQAPAPDKPAPGKTEAQAPKAETLAAFAPTPGKTLTVDTP 78 Query: 77 SLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELP 136 N G +L+ Y ++++SP+V L++ A + N Sbjct: 79 LYTAVFNSTGGLLSRFSLKQYRQTIAADSPLVDLINEKAHAKAPLGLIL------NGTPT 132 Query: 137 NSNTVWNLISGKILTPTT---PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 N W++ G + + + V + + I+ +YL +++N + Sbjct: 133 WQNVEWSVQGGDVTLDASGTASVTFVGRMGDTIIKRVLTFSGSNYLIDEKLSLSNTGANP 192 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 R + + +++ + A D S +E +S+ + + + W Sbjct: 193 ARERLSMTVAVDRLSAEGDSYNPTQ---AAFYDTSGLELFHSEKKLAEGIADEKPVEWGA 249 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 I Y+ IP T + K ++ + + I G T + G K Sbjct: 250 IMSNYFLVGVIPDT-TDLRGKAKIEDG---LFRLAVDKDGLEIPAGGRQDLTISYYLGPK 305 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + +A ID+GWF FIAKP+ L+ +FYN VGN+G+AI+L TV +K Sbjct: 306 APKFL-----AMAPHHLSAAIDYGWFDFIAKPLVKLLHFFYNYVGNYGVAIILLTVLIKA 360 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 +F+PL+ K Y S MK +QP + +LREK+K Q + + M+QLYKT+ +NP GC P+ Sbjct: 361 IFWPLSHKSYKSMEQMKKLQPLLSQLREKYKD-DRQKMNEEMMQLYKTYKVNPAGGCLPM 419 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFW--------GWIKDLAAADPTNIFTLFGILPFYLP 485 ++QIPVFF +Y+ + S+E+RHA F W+ DL+A DP Sbjct: 420 VVQIPVFFGLYQALLHSIELRHAAFITYFPFTHHIWLADLSAKDPYY------------- 466 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 I P+IM +MF+Q KM+P P D QA I+ MPV+F F +FP+GL++YW + Sbjct: 467 ------ITPLIMGATMFLQQKMTPAPGDPTQAKIMLLMPVIFTFMFLNFPSGLVVYWLVN 520 Query: 546 NVISIVQQAVI-MKMH 560 NVISI QQ + K H Sbjct: 521 NVISIAQQYWMLNKKH 536 >gi|83719666|ref|YP_443729.1| inner membrane protein translocase component YidC [Burkholderia thailandensis E264] gi|167620894|ref|ZP_02389525.1| putative inner membrane protein translocase component YidC [Burkholderia thailandensis Bt4] gi|123536100|sp|Q2STM0|OXAA_BURTA RecName: Full=Inner membrane protein oxaA gi|83653491|gb|ABC37554.1| inner membrane protein, 60 kDa [Burkholderia thailandensis E264] Length = 557 Score = 310 bits (793), Expect = 5e-82, Method: Composition-based stats. Identities = 151/582 (25%), Positives = 243/582 (41%), Gaps = 55/582 (9%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + N + N + + +A Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA 60 Query: 59 DDRAQALSMS-----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + A + + V G I+ +G L L P Sbjct: 61 NALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPD 117 Query: 108 VTL-LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN---- 162 +++ L + + Y A + + PN N V+ +G L Sbjct: 118 LSVTLFDNAANHTYLARTGLL----GGDFPNHNDVYTQAAGPTSLAAGQNTLKLAFESPV 173 Query: 163 -ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGF 220 + + Y+ + + N + S ++R T F G Sbjct: 174 KGGVKVVKTYTFTRGSYVIGVDTKIENVGTAPVTPSVYMELVRDNTSVETPMFSHTFLGP 233 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 K + +SDI+K+ N W+ + Y+AS +IP + Sbjct: 234 AVYTDQKHFQKITFSDIDKNKADYVTSADNGWIAMVQHYFASAWIPQQGA--KRDIYVEK 291 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 Y+ I PG+S + LFAG +E + P E++ D+GW Sbjct: 292 IDPTLYRVGVKQPVAAIAPGQSADVSARLFAGPEEERMLEGIA-----PGLELVKDYGWV 346 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 IAKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ L Sbjct: 347 TIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQAL 406 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+F +S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ Sbjct: 407 RERF-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWI 465 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+ DP I P++M++SMF+Q K++P P D QA + Sbjct: 466 LWIHDLSQRDPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKM 506 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 507 MMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 548 >gi|167587875|ref|ZP_02380263.1| putative inner membrane protein translocase component YidC [Burkholderia ubonensis Bu] Length = 504 Score = 310 bits (793), Expect = 5e-82, Method: Composition-based stats. Identities = 137/500 (27%), Positives = 226/500 (45%), Gaps = 35/500 (7%) Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 + V+ G I+ +G L L+ P + + +T + + Sbjct: 28 QAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLYITLFDHTASHTYLARTG 84 Query: 127 VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILFERTISLDEHYLFKIV 183 + + + + N + +KL F+ + + Y+ + Sbjct: 85 LLGGDFPNHNDVYSQVNAGPTTLSGDQNALKLSFESPVKGGVKVVKTYTFTRGSYVIDVD 144 Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 + N + + ++R T F G K + +SD++K+ Sbjct: 145 TKIDNVGTAPVSPTVYMELVRDNTAVETPMFSHTFLGPAVYTDSKHFQKIDFSDLDKNKA 204 Query: 243 SNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 + N W+ + Y+AS +IP + A Y+ I PG+S Sbjct: 205 NFEKSADNGWVAMVQHYFASAWIPKQG--VKRDIYAEKFDPALYRVGVKQPVGAIAPGQS 262 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G Sbjct: 263 ADVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWG 317 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+F +S PQ + A+++LYKT Sbjct: 318 WAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMNAALMELYKT 376 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 377 EKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFF--------- 427 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 I P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y Sbjct: 428 ----------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLY 477 Query: 542 WSWSNVISIVQQAVIMKMHG 561 + +NV+SI QQ I + G Sbjct: 478 YVVNNVLSIAQQYYITRKLG 497 >gi|167582766|ref|ZP_02375640.1| putative inner membrane protein translocase component YidC [Burkholderia thailandensis TXDOH] Length = 557 Score = 310 bits (793), Expect = 5e-82, Method: Composition-based stats. Identities = 151/582 (25%), Positives = 243/582 (41%), Gaps = 55/582 (9%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + N + N + + +A Sbjct: 1 MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAA 60 Query: 59 DDRAQALSMS-----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + A + + V G I+ +G L L P Sbjct: 61 NALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPD 117 Query: 108 VTL-LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN---- 162 +++ L + + Y A + + PN N V+ +G L Sbjct: 118 LSVTLFDNAANHTYLARTGLL----GGDFPNHNDVYTQAAGPTSLAADQNTLKLAFESPV 173 Query: 163 -ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGF 220 + + Y+ + + N + S ++R T F G Sbjct: 174 KGGVKVVKTYTFTRGSYVIGVDTKIENVGTAPVTPSVYMELVRDNTSVETPMFSHTFLGP 233 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 K + +SDI+K+ N W+ + Y+AS +IP + Sbjct: 234 AVYTDQKHFQKITFSDIDKNKADYVTSADNGWIAMVQHYFASAWIPQQGA--KRDIYVEK 291 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 Y+ I PG+S + LFAG +E + P E++ D+GW Sbjct: 292 IDPTLYRVGVKQPVAAIAPGQSADVSARLFAGPEEERMLEGIA-----PGLELVKDYGWV 346 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 IAKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ L Sbjct: 347 TIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQAL 406 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 RE+F +S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ Sbjct: 407 RERF-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWI 465 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 WI DL+ DP I P++M++SMF+Q K++P P D QA + Sbjct: 466 LWIHDLSQRDPYF-------------------ILPVLMAVSMFVQTKLNPTPPDPVQAKM 506 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 507 MMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 548 >gi|297570495|ref|YP_003691839.1| membrane protein insertase, YidC/Oxa1 family [Desulfurivibrio alkaliphilus AHT2] gi|296926410|gb|ADH87220.1| membrane protein insertase, YidC/Oxa1 family [Desulfurivibrio alkaliphilus AHT2] Length = 560 Score = 309 bits (792), Expect = 6e-82, Method: Composition-based stats. Identities = 146/575 (25%), Positives = 246/575 (42%), Gaps = 36/575 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 N+ +AI LS+ ++ +Q ++ P + + + + + + + + D Sbjct: 1 MDNYRALIAIVLSMAVLLIYQFLFMPPPAPVTDAPGEAERVAAERSPAAEALSPADLADP 60 Query: 62 A---------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 A + + +K I+ G L + V SP Sbjct: 61 ALVEEAQRPVDVASLLDPADRAREIRVKTGLYTAVISEAGGVLQSFTLNEFRETVDPGSP 120 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 L+ + + + E+ + + T Sbjct: 121 PKDLI-RVEPDDGLPLLFSWGVEPSRAEMLHYTADRERLVVGQGQERTLTLRAQSPLGLE 179 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 D YL + V N ++ +P ++ ++P AT F Sbjct: 180 FIRTYTFRDGDYLIDVAVEVVNRGEVPLQGAPYLTLV-NRPFVATGDPLEHFLFTGPAAL 238 Query: 227 KSLVEQKYSDIEKSSISNFHESNS---WLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 Q+ + + W G D Y+ + IP + F D Sbjct: 239 VDNEVQQVKVKDLAGERAGRSFTGRVRWAGYHDSYFLTSIIPLATDQATAHFSSRRD--E 296 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 ++ I G + ++ G K+ ++ D +++GWF F+A Sbjct: 297 LVTTVLASAADIIPAGGAHRYDYMVYFGPKKLTLLNELGHD-----LARAVNFGWFDFLA 351 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +P F L+ + Y LVGN+G+AI+L T+ +K F+PL +K S M+ IQPK+ +LREK+ Sbjct: 352 RPTFYLLHFLYGLVGNYGVAIILVTIIIKAAFWPLTQKGLKSMKVMQKIQPKMTKLREKY 411 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K Q Q+ M++LY+T+ +NPL GC P+LLQIPVFFA+YKV+ S+E+RHAPF WI Sbjct: 412 KD-DRQRQQQEMLKLYQTYKVNPLGGCLPMLLQIPVFFALYKVLLQSIELRHAPFMLWIN 470 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+A D I F +P + + ++M+LSMF+Q KM+P D QA I+ ++ Sbjct: 471 DLSAPDRLYIG-------FDIPWLGGIPVLTLLMALSMFVQQKMTPIS-DPMQARIMLFL 522 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 PVVF F +F +GL++YW +NV++I QQ +I + Sbjct: 523 PVVFFFLFLNFASGLVLYWFINNVLTIAQQYMIYR 557 >gi|134297399|ref|YP_001121134.1| putative inner membrane protein translocase component YidC [Burkholderia vietnamiensis G4] gi|166975857|sp|A4JJ46|OXAA_BURVG RecName: Full=Inner membrane protein oxaA gi|134140556|gb|ABO56299.1| protein translocase subunit yidC [Burkholderia vietnamiensis G4] Length = 554 Score = 309 bits (790), Expect = 1e-81, Method: Composition-based stats. Identities = 143/577 (24%), Positives = 242/577 (41%), Gaps = 46/577 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + + + + + A Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATQTAPAAASGASGTGATTTAGEA 60 Query: 59 DDRAQALSMSP---------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 A A + V+ G I+ +G L L+ P + Sbjct: 61 PAAAAAGAAPATTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLY 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNI 166 + +T + + + + T N + + +KL F+ Sbjct: 118 ITLFDHTAGHTYLARTGLLGGDFPNHNDVYTQLNPGATSLTGDQNTLKLSFESPVKGGVK 177 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLG 225 + + Y+ + + N + + ++R T F G Sbjct: 178 VVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTD 237 Query: 226 DKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 K + +SD++K+ + N W+ + Y+AS +IP + + Sbjct: 238 AKHFQKINFSDLDKNKADYVNSADNGWVAMVQHYFASAWIPQQG--VKRDIYAEKIDPSL 295 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y+ I PG+S LFAG +E + P E++ D+GW IAK Sbjct: 296 YRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAK 350 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+ + +VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+F Sbjct: 351 PLFWLLEKIHGVVGNWGWAIVLLTILIKAVFFPLSAASYKSMARMKEITPRMQALRERF- 409 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 +S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI D Sbjct: 410 KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHD 469 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+ DP I P++M++SM++Q ++P P D QA ++ +MP Sbjct: 470 LSQRDPFF-------------------ILPVLMAVSMYVQTSLNPTPPDPVQAKMMKFMP 510 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 511 IAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 547 >gi|241767065|ref|ZP_04764844.1| YidC translocase/secretase [Acidovorax delafieldii 2AN] gi|241362388|gb|EER58355.1| YidC translocase/secretase [Acidovorax delafieldii 2AN] Length = 495 Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats. Identities = 129/502 (25%), Positives = 220/502 (43%), Gaps = 33/502 (6%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 RVE+ S + +G L + + LL + + Y A+ + Sbjct: 17 ERVEVTTDVYRLSFDSEGGSLTHAELLKHVDMADKSRNF--LLFDESAERVYVAQTGLIG 74 Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVT 187 + V + K I+ + + +T +L Y + V Sbjct: 75 GSYPTHKTVMKVVPGPRALKDGENELSIRFESPDLGGVKLVKTWTLKRGSYDMAVAHEVV 134 Query: 188 NNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNF 245 N + +++R P ++ + G K + ++ IE+ Sbjct: 135 NTGSSPVSPQLYLQLVRDGNKPPGESSFYSTFTGPAVYTDAKKYQKVEFKKIEEGKAEIE 194 Query: 246 HE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 +N ++ + Y+AS ++ + + Y I PG S T Sbjct: 195 KSATNGYVAMVQHYFASAWLLGDGVQRELFMRKVD--TNLYSVGMITPVGEIAPGASKTV 252 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 LFAG + T+ P E++ D+GW +AKP++ L+ + L+GN+G +I Sbjct: 253 QAQLFAGPQVEKTLEALT-----PGLELVKDYGWLTILAKPLYWLLDQLHKLLGNWGWSI 307 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 + + +K+ F+ L K Y S A MK I PKI E+RE+ K PQ +Q+ M+++Y+ + Sbjct: 308 VGLVLLLKIAFYWLNAKAYASMAKMKAINPKITEMRERLKD-KPQQMQQEMMRIYREEKV 366 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NP+ GC+PI++QIPVF A+Y V+ S+EMR+AP+ GWI DL+ DP Sbjct: 367 NPMGGCFPIMIQIPVFIALYWVLLSSVEMRNAPWIGWIHDLSTPDPYF------------ 414 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I P++M+ S +Q ++P P D QA ++ +MP++F FPAGL++YW Sbjct: 415 -------ILPLLMTASSLLQTALNPAPPDPMQAKMMWFMPLIFSVMFFFFPAGLVMYWLT 467 Query: 545 SNVISIVQQAVIMKMHGAEIGL 566 +N++SI QQ +I G Sbjct: 468 NNILSIAQQWIINTRMGVPPQF 489 >gi|221135461|ref|ZP_03561764.1| 60 kDa inner membrane insertion protein [Glaciecola sp. HTCC2999] Length = 571 Score = 308 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 144/595 (24%), Positives = 260/595 (43%), Gaps = 61/595 (10%) Query: 1 MERNWNY-FVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNI-----------------Q 41 ME ++ +A+AL S ++ WQ Y + + + Q Sbjct: 1 MESQRSFMLIALALVSFLLWQEWQTAYGPKAVTPVEQTEQKASLTEAKFVASNVPSDLAQ 60 Query: 42 TVKQPNQVDNSYAAVLIDDRAQA--------LSMSPR-VELKNPSLIGSINLKGAQFDDL 92 T N V N+ A V + + L S R VE+ +L +I+L G Sbjct: 61 TGTNTNSVQNTAADVPANMANEPTVPVVRNQLGQSERFVEVTTDTLQVTIDLLGGDVVKA 120 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI--SGKIL 150 NL Y + SN L N Y A+ + P+ ++ + Sbjct: 121 NLIKYPITEGSNDAYSLL--RPNAAALYVAQSGLIGANGPDANPDGRPLYTSPIMQYTLN 178 Query: 151 TPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209 + + L + +N + +T ++ ++ T+TN S D I P ++ + Sbjct: 179 NDSLSVPLSWVGSNGMRITKTFVFTRGNHAVELQQTITNGSNDTIIVQPYAQLKQTFTLP 238 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET 269 N F A ++ ++ + W+ + + Y+ S ++P ++ Sbjct: 239 EGNMFMPTYRGAAYGTEQEQYQKYSFGDIEDESLRIATPAGWIAMIEHYFLSAWVPPQDK 298 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + + + G +++ ++I+ G + L+ G K+ T+ Y K Sbjct: 299 TNTIYTRAI--GTEYATIGYTSEPVSIVSGAETRLDSLLYLGPKDQDTLKQYAK-----G 351 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + +D+G+ +FI++ +F L+ +V N+G+AI++ T+ VK + +PL KKQY S A M Sbjct: 352 LNLTVDYGFLWFISEWLFWLLQMIQGVVVNWGVAIIIITIIVKGIMYPLTKKQYESMAKM 411 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + + PK+ +L+E+F Q + +AM++LYK +NP+ GC+P+LLQ+P+F A+Y V Sbjct: 412 RVLGPKMTQLKERFGD-DRQKMSQAMMELYKKEKVNPMGGCFPLLLQMPIFLALYWVFLE 470 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+E+RHA F WI DL+ DP + PI+ +SM+ K+ P Sbjct: 471 SVELRHADFVFWITDLSTKDPYF-------------------VLPILTGISMWALQKLQP 511 Query: 510 PP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D+ Q I+ +MP++ FP+GL++YW SNVI++VQ +I Sbjct: 512 MTVTDEMQKKIMQFMPIMMTIFFMWFPSGLVLYWLISNVITLVQAKLIYASMEKR 566 >gi|302341714|ref|YP_003806243.1| membrane protein insertase, YidC/Oxa1 family [Desulfarculus baarsii DSM 2075] gi|301638327|gb|ADK83649.1| membrane protein insertase, YidC/Oxa1 family [Desulfarculus baarsii DSM 2075] Length = 546 Score = 307 bits (786), Expect = 3e-81, Method: Composition-based stats. Identities = 147/564 (26%), Positives = 260/564 (46%), Gaps = 25/564 (4%) Query: 1 ME-RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ +A+ +SV +++AW F + P ++ Q + AA+ Sbjct: 1 MDSDAKRVVLALVISVAVLFAWTTFVMPPEPKQAPAPTATPAQTAQATAAAPAPAAMPAP 60 Query: 60 DRAQALSMS-PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 A + + V ++ P + + + KG + L+ Y + LL +++ Sbjct: 61 APAPQVMPAYQDVVVETPLMRATFSTKGGALRKVVLKDYFAKPGQQGGEMVLLDLADS-E 119 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 Y L V + L + ++ + ++A + + + + Sbjct: 120 PYALGLALVKL--DPHLAQRPFQASAQRLEVTAAGQSLSFSAESAGVRVVKTYTFRPDSH 177 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 F++ ++ N + +I +P + + + N++ + G SL E + D+E Sbjct: 178 AFQLSVSLQNKNAGRIELTPELILAEYVSKMHANSYAFTGSQVVAGG--SLEELDHGDLE 235 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG---HARYQAKFSANEIT 295 S + L +S Y+ P +Q K + G A + + Sbjct: 236 DSPV--VAGPIDCLTLSIPYFMGAVAPES-WPAVAQGKPSARGWADAKLMTATLVSPLLP 292 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G+S+ ++ G KE + M +D+GWF IAKPM +++F++ Sbjct: 293 MDAGQSLDLKFLVYYGPKELHVLEPLGHS-----LAMAVDFGWFDVIAKPMLAGLNFFHD 347 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 V N+G+AI++ TV +KLLF+PL K Y S M+ +QP+I ++REK+K Q + + + Sbjct: 348 YVNNYGVAIIIITVLIKLLFWPLQNKSYESMKKMQKLQPQIAKIREKYKDDK-QEMNQQV 406 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +QLYKT+ +NPL GC P+L Q+PVF A YKV+ S+E+RHAPFW WI DL+A D Sbjct: 407 MQLYKTYKVNPLGGCLPMLAQVPVFIAFYKVLGSSIELRHAPFWLWINDLSAPDR---LP 463 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 + +PF + + ++M SMFI KMSP D Q ++ MPV+F +FP Sbjct: 464 IGFEIPFVG---DGIPVLTLLMGASMFITQKMSPATGDPTQQKMMMLMPVIFTVMFINFP 520 Query: 536 AGLIIYWSWSNVISIVQQAVIMKM 559 +GL++YW N++ I QQ ++ + Sbjct: 521 SGLVLYWFVQNLLGIGQQWLVNRR 544 >gi|298369729|ref|ZP_06981046.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sp. oral taxon 014 str. F0314] gi|298282286|gb|EFI23774.1| membrane protein insertase, YidC/Oxa1 family [Neisseria sp. oral taxon 014 str. F0314] Length = 544 Score = 307 bits (786), Expect = 3e-81, Method: Composition-based stats. Identities = 130/572 (22%), Positives = 233/572 (40%), Gaps = 56/572 (9%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + ++ I++ WQ + P+ + + + Q V + + A Sbjct: 1 MDSKRLVTFAVIAFAILFGWQKLFPAPKPAQTQHAVQQQQAVAAKAEAALTAAVP----- 55 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + ++ I+ K L L Y +N V L + Y Sbjct: 56 ---------ITVTTDTVKAVIDEKSGDLRRLTLLKYKASGDANKDFV--LFDDGKDHTYV 104 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 A+ + + N L N + T ++L + + + YL Sbjct: 105 AQAELLDAQGNNVLKNVGFTAPQKQYTLNGDKTEVRLSAEADGLKIDKVYTFTKGSYLIN 164 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF--GVQEGFIAVLGDKSLVEQKYSDIEK 239 + VT+ I + R++R + + G + + + +SD++ Sbjct: 165 VRFDVTDAGGKPINLTANYRVVRDSSKPEGQGYFTQSYVGPVVYTPEGQFEKVTFSDLDD 224 Query: 240 S-------SISNFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHARYQ 286 + ++ WLG+ + ++ + +I + Q G Y Sbjct: 225 DFKSGKNKAEYVHKTNSGWLGMIEHHFMATWILQPKDGQTVCAAGDCQIDIKRRGDNLYS 284 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 A S + G + + L+AG + + + ++ D+G ++ A P+ Sbjct: 285 AGVSVPMAAVAAGGKASVSMNLYAGPQTTSVLAGIAD-----KLQLAKDYGKVHWFASPL 339 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L++ + L+GN+G +I+ T+ VK + +PL Y S A M+ + PK+ ++EK+ Sbjct: 340 FWLLNKLHELIGNWGWSIIALTIIVKAVLYPLTNASYRSMAKMRAVAPKLQAIKEKYGDD 399 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q M Q+YK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI DL+ Sbjct: 400 RMAQQQAMM-QMYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLS 458 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 DP I P+IM+ +MF Q ++PPP D QA ++ MP+V Sbjct: 459 RPDPFY-------------------ILPLIMAGTMFAQTFLNPPPTDPMQAKMMKIMPMV 499 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F FPAGL++YW +N+++I QQ I + Sbjct: 500 FSVMFFFFPAGLVLYWVVNNLLTIAQQWYINR 531 >gi|325519717|gb|EGC99037.1| membrane protein insertase [Burkholderia sp. TJI49] Length = 553 Score = 307 bits (785), Expect = 4e-81, Method: Composition-based stats. Identities = 145/576 (25%), Positives = 241/576 (41%), Gaps = 45/576 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + + + + + A + Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGTGATTTAGEV 60 Query: 59 DDRAQALSMSP--------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 A + + V+ G I+ +G L L+ + + Sbjct: 61 PAAAAGTAPATTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPD--LYIT 118 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNIL 167 L + Y A + + + T + + +KL F+ + Sbjct: 119 LFDHTAGHTYLARSGLLG-GDFPNHNDVYTQVSTGPTSLTGDQNTLKLSFESPVKGGVKV 177 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGD 226 + Y+ + + N + + ++R T F G Sbjct: 178 VKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDA 237 Query: 227 KSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 K + +SD++K+ N W+ + Y+AS +IP + + Y Sbjct: 238 KHFQKINFSDLDKNKADYVTSADNGWVAMVQHYFASAWIPQQG--VKRDIYAEKIDPSLY 295 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + I PG+S LFAG +E + P E++ D+GW IAKP Sbjct: 296 RVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKP 350 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + LVGN+G AI+L TV +K +FFPL+ Y S A MK I P++ LRE+F + Sbjct: 351 LFWLLEKIHGLVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-K 409 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL Sbjct: 410 SDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDL 469 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 + DP I P++M++SMF+Q ++P P D QA ++ +MP+ Sbjct: 470 SQRDPFF-------------------ILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPI 510 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 511 AFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 546 >gi|325922758|ref|ZP_08184492.1| protein translocase subunit yidC [Xanthomonas gardneri ATCC 19865] gi|325546754|gb|EGD17874.1| protein translocase subunit yidC [Xanthomonas gardneri ATCC 19865] Length = 573 Score = 306 bits (784), Expect = 4e-81, Method: Composition-based stats. Identities = 123/594 (20%), Positives = 233/594 (39%), Gaps = 60/594 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + + L V + W + + Q+V +D + + Sbjct: 1 MNQTRVFLIFAWLMVAALL-WMEW-GKDKTAANAPAVATTQSVPAARDLDAAATPANVPA 58 Query: 61 RAQALSMS---------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 P V L + L ++ G D L + Sbjct: 59 AQAIPQAGVPGTVSATSTTAAPPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELLQFPQ 116 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPI 156 +P+ L + + Y A + S + + + + + Sbjct: 117 TKDGTAPVSLL--TEDAAHPYNATSGWASEHSPVPGVGGFRAEQPGAAFELARGQNSLVV 174 Query: 157 KLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 V+ N + RT +L Y I D V N S ++ R + Sbjct: 175 PFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMTN 234 Query: 216 V----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 G + + + D N + W+ + ++ + +IP K+ Sbjct: 235 PDSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ-- 292 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 + L+ R A+ T+ PG++ +T L+ G K + E + R Sbjct: 293 -ASLYVLNQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVS-LIAKEDVKGLDRVV 350 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY S A M+ Sbjct: 351 DYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRR 410 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V+ S+ Sbjct: 411 FQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESV 469 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+R AP+ GWI+DL A DP I P++ M+ K++P P Sbjct: 470 ELRQAPWLGWIQDLTARDPYF-------------------ILPVLNIAIMWATQKLTPTP 510 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 511 GMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 564 >gi|161526323|ref|YP_001581335.1| putative inner membrane protein translocase component YidC [Burkholderia multivorans ATCC 17616] gi|189348962|ref|YP_001944590.1| putative inner membrane protein translocase component YidC [Burkholderia multivorans ATCC 17616] gi|254772760|sp|A9ACA0|OXAA_BURM1 RecName: Full=Inner membrane protein oxaA gi|160343752|gb|ABX16838.1| 60 kDa inner membrane insertion protein [Burkholderia multivorans ATCC 17616] gi|189332984|dbj|BAG42054.1| preprotein translocase YidC subunit [Burkholderia multivorans ATCC 17616] Length = 553 Score = 306 bits (784), Expect = 5e-81, Method: Composition-based stats. Identities = 142/576 (24%), Positives = 239/576 (41%), Gaps = 45/576 (7%) Query: 1 MERNWNYFVAIALSVIIVYA--WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ I ++ WQ + P + + + + + A + Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAGGASGAGATTTAGNV 60 Query: 59 DDRAQALSMSP--------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 A + + V+ G I+ +G L L+ P + + Sbjct: 61 PAPAAGTAPATTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLYI 117 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNIL 167 +T + + + + T N + +KL F+ + Sbjct: 118 TLFDHTAGHTYLARTGLLGGDFPNHNDVYTQVNAGPTSLSGDQNTLKLSFESPVKGGVKV 177 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGD 226 + Y+ + + N + + ++R T F G Sbjct: 178 VKTYTFTRGSYVIGVDTKIDNVGTTPVTPTLYMELVRDNTAVETPMFSHTFLGPAVYTDA 237 Query: 227 KSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 K + +SD++K+ N W+ + Y+AS +IP + Y Sbjct: 238 KHFQKINFSDLDKNKADYVTSADNGWVAMVQHYFASAWIPQHG--VKRDIYAEKIDPSLY 295 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + I PG+S LFAG +E + P E++ D+GW IAKP Sbjct: 296 RVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKP 350 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ ++ VGN+G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+FK Sbjct: 351 LFWLLEKIHSYVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKN 410 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL Sbjct: 411 -DPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDL 469 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 + DP I P++M++SM++Q ++P P D QA ++ +MP+ Sbjct: 470 SQRDPYF-------------------ILPVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPI 510 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 511 AFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 546 >gi|167736503|ref|ZP_02409277.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 14] Length = 496 Score = 306 bits (783), Expect = 6e-81, Method: Composition-based stats. Identities = 141/501 (28%), Positives = 220/501 (43%), Gaps = 42/501 (8%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNAYFAELDYV 127 V G I+ +G L L P +++ L + Y A + Sbjct: 21 QLVRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPDLSVTLFDHTANHTYLARTGLL 77 Query: 128 STANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISLDEHYLFKI 182 + PN N V+ ++G L + + Y+ + Sbjct: 78 ----GGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGV 133 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSS 241 + N + S ++R T F G K + + DI+K+ Sbjct: 134 DTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNK 193 Query: 242 ISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 N W+ + Y+AS +IP Y+ I PG+ Sbjct: 194 ADYVTSADNGWIAMVQHYFASAWIPQSGA--KRDIYVEKIDPTLYRVGVKQPVAAIAPGQ 251 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 S + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+ Sbjct: 252 SADVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNW 306 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+F +S PQ + A+++LYK Sbjct: 307 GWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMNAALMELYK 365 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 T +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 366 TEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYF-------- 417 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 I P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++ Sbjct: 418 -----------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVL 466 Query: 541 YWSWSNVISIVQQAVIMKMHG 561 Y+ +NV+SI QQ I + G Sbjct: 467 YYVVNNVLSIAQQYYITRTLG 487 >gi|167908935|ref|ZP_02496026.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 112] Length = 486 Score = 306 bits (782), Expect = 9e-81, Method: Composition-based stats. Identities = 141/499 (28%), Positives = 220/499 (44%), Gaps = 42/499 (8%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNAYFAELDYVST 129 V G I+ +G L L P +++ L + Y A + Sbjct: 13 VRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPDLSVTLFDHTANHTYLARTGLL-- 67 Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISLDEHYLFKIVD 184 + PN N V+ ++G L + + Y+ + Sbjct: 68 --GGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDT 125 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 + N + S ++R T F G K + + DI+K+ Sbjct: 126 KIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKAD 185 Query: 244 NFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 N W+ + Y+AS +IP Y+ I PG+S Sbjct: 186 YVTSADNGWIAMVQHYFASAWIPQSGA--KRDIYVEKIDPTLYRVGVKQPVAAIAPGQSA 243 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G Sbjct: 244 DVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGW 298 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+F +S PQ + A+++LYKT Sbjct: 299 AIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMNAALMELYKTE 357 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 358 KVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYF---------- 407 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 408 ---------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYY 458 Query: 543 SWSNVISIVQQAVIMKMHG 561 +NV+SI QQ I + G Sbjct: 459 VVNNVLSIAQQYYITRTLG 477 >gi|167822122|ref|ZP_02453593.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei 9] Length = 492 Score = 306 bits (782), Expect = 9e-81, Method: Composition-based stats. Identities = 141/499 (28%), Positives = 220/499 (44%), Gaps = 42/499 (8%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNAYFAELDYVST 129 V G I+ +G L L P +++ L + Y A + Sbjct: 19 VRFSTDVYNGEIDTRGGTLAKLTLTK---AGDGKQPDLSVTLFDHTANHTYLARTGLL-- 73 Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISLDEHYLFKIVD 184 + PN N V+ ++G L + + Y+ + Sbjct: 74 --GGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDT 131 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 + N + S ++R T F G K + + DI+K+ Sbjct: 132 KIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKAD 191 Query: 244 NFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 N W+ + Y+AS +IP Y+ I PG+S Sbjct: 192 YVTSADNGWIAMVQHYFASAWIPQSGA--KRDIYVEKIDPTLYRVGVKQPVAAIAPGQSA 249 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + LFAG +E + P E++ D+GW IAKP+F L+ + VGN+G Sbjct: 250 DVSARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGW 304 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L T+ +K +FFPL+ Y S A MK I P++ LRE+F +S PQ + A+++LYKT Sbjct: 305 AIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF-KSDPQKMNAALMELYKTE 363 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 364 KVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYF---------- 413 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I P++M++SMF+Q K++P P D QA ++ +MP+ F FPAGL++Y+ Sbjct: 414 ---------ILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYY 464 Query: 543 SWSNVISIVQQAVIMKMHG 561 +NV+SI QQ I + G Sbjct: 465 VVNNVLSIAQQYYITRTLG 483 >gi|118594210|ref|ZP_01551557.1| preprotein translocase subunit yidC [Methylophilales bacterium HTCC2181] gi|118439988|gb|EAV46615.1| preprotein translocase subunit yidC [Methylophilales bacterium HTCC2181] Length = 546 Score = 306 bits (782), Expect = 9e-81, Method: Composition-based stats. Identities = 146/562 (25%), Positives = 251/562 (44%), Gaps = 24/562 (4%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + S ++ W ++ E + I P+ + + Sbjct: 1 METKRLILFVVFSFSLLLLWDSWQKEQTPIETVGVTEKISDSSIPSSSAQLTNNMPASNL 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 L+ +P + + SI+ G L L + ++S + Y Sbjct: 61 GFQLAQTPYITVTTDLYNISISNVGGDIRSLELLKHK---DGEGAPYLMMSDNANPLLYV 117 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 A+ + ++ S ++ + LVF+N+ + + Y+ + Sbjct: 118 AQTGLL--GGDLPSHKDIYSAMRASYQMNDNELVVPLVFENSAVKVTKTYRFTKNSYVIQ 175 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 + ++ N S++ I+ S + + + A +K + D Sbjct: 176 VTYSLLNKSLNTIKSSVYLQFIHDGTTHQGSAMMPSFTGTAYFNNKDKFTKLAFDDVDKK 235 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 + S+ W+GI +Y+A +I ETS K ++D Y + A I PG + Sbjct: 236 PFSLVTSDGWIGIIQRYFAGAWILPSETSRELYSKKVADN--IYASGTLAFLGEIDPGST 293 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 T+ LF G + + + +D+GW FIA P+F ++S V N+G Sbjct: 294 KLFTSELFVGPQSKDDLAAAAE-----GLSYAVDYGWLTFIASPLFSVLSGIQKAVINWG 348 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+L T+ +KLLF+PL+ Y S A M+ + P++ ++EKF Q +Q+AM++LYKT Sbjct: 349 VAIILLTILIKLLFYPLSAASYRSMAQMREVAPRLQSMKEKFGDDK-QKMQQAMMELYKT 407 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 INPL GC PIL+QIPVF A+Y V+ S+E+R AP + +I DL+ D Sbjct: 408 EKINPLGGCLPILVQIPVFIALYWVLLGSVELRGAP-FLYISDLSVPDSL---------- 456 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 F F+ +G P++M+ SMF+QMK++P P D QA ++ MP++F FPAGL++Y Sbjct: 457 FGTLWFVPLGPLPLLMAASMFLQMKLNPKPTDPMQARLMMMMPIIFSIFFFFFPAGLVLY 516 Query: 542 WSWSNVISIVQQAVIMKMHGAE 563 W +N++SI QQ + AE Sbjct: 517 WLVNNILSIGQQWYVNNKIHAE 538 >gi|329118137|ref|ZP_08246849.1| YidC/Oxa1 family membrane protein insertase [Neisseria bacilliformis ATCC BAA-1200] gi|327465797|gb|EGF12070.1| YidC/Oxa1 family membrane protein insertase [Neisseria bacilliformis ATCC BAA-1200] Length = 544 Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats. Identities = 133/574 (23%), Positives = 234/574 (40%), Gaps = 58/574 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + +S +I++ W + P+ + +++ Q N Sbjct: 1 MNAKRTTLFFIVSALILFGWGWLFPAPQPVQNPAQQQAAQPAAAVQAALNPTVP------ 54 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + ++ I+ L L Y+ P L +N Y Sbjct: 55 ---------ITVATDTVSAVIDEASGDLRGLTLLKYNSADDEGKPFA--LFENNQNGVYI 103 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLF 180 A+ D + + + ++L A+ + +T + YL Sbjct: 104 AQSDLIDETGRSLTQGLSFKSAKKQYALENGKAQVRLTATTASGLEIAKTYTFTQGSYLI 163 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--QEGFIAVLGDKSLVEQKYSDIE 238 + V N S ++ + R++R A + + G + + + +SD++ Sbjct: 164 DVRFDVANRSGKPLKAAAAYRVVRDSKTPAGQGYFMSSYTGPVLYTPEGKFQKVSFSDLD 223 Query: 239 KS-------SISNFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHARY 285 + + W+GIS Y+ S +I + + Y Sbjct: 224 DDFQKGRDQAEYERQTQSGWVGISQHYFFSAWILQPKDGASICAAAGCRIDIKRRDGGLY 283 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 A SA E + G S + L+AG + + E++ D+G ++ A Sbjct: 284 TAGVSAAEPELPAGASQSYAAKLYAGPQTTAELGKIAD-----HLELVKDYGRVHWPATA 338 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F LM + L GN+G AI+L TV VK++ +PL Y S A M+ + PK++ L+ K Sbjct: 339 LFWLMDKLHGLTGNWGWAIVLLTVIVKIILYPLNNASYKSMAKMRAVAPKLEALK-KQYG 397 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 +Q+AM+Q+YK INPL GC P+LLQIP+F +Y I S+E+R AP+ GWI DL Sbjct: 398 DDRMAMQQAMMQMYKDEKINPLGGCLPMLLQIPIFIGLYWAIFSSVELRQAPWLGWITDL 457 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 + DP I P++M+ +M Q ++PPP+D QA ++ MP+ Sbjct: 458 SRHDPWF-------------------ILPVLMTATMMFQTTLNPPPSDPMQAKMMKIMPL 498 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 VF FPAGL++Y+ +N+++I QQ + + Sbjct: 499 VFSVMFFFFPAGLVLYYVVNNILTIAQQMHVNRS 532 >gi|158520119|ref|YP_001527989.1| 60 kDa inner membrane insertion protein [Desulfococcus oleovorans Hxd3] gi|158508945|gb|ABW65912.1| 60 kDa inner membrane insertion protein [Desulfococcus oleovorans Hxd3] Length = 559 Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 147/520 (28%), Positives = 240/520 (46%), Gaps = 22/520 (4%) Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 + A V + A V ++ ++N GA D L+ Y Sbjct: 61 ENAPPEQVTPADSALVPTEAPAAP------VVVETGLYTVTLNGNGAHISDFVLKNYRET 114 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 SP LLS +N + + L+ + A P S V + P + + Sbjct: 115 NDPASPAKRLLSDNNPQGSLRVNLEGDTLAGMANGPYSADVADGPVVVSDQPRSVVFTRQ 174 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 ++ +R + Y+ + T+ N S + + + R+ + Sbjct: 175 FPGGRVVEKRYTFTPDSYMIDLAVTLKNGSETPLSGNLAVTLARYFTDDGSRFVFEGPSA 234 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + L E K DI+K + S +W+ I ++Y+ S IP T + + Sbjct: 235 LVGHD---LEEIKLGDIQKKASLT--GSLAWISIQNRYFMSALIPETPTEAAMRLSRTPE 289 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 A + A T+ + T +F G K + + +++G+F Sbjct: 290 Q--VVTATYLAPARTVGANSTETYRFSVFMGPKSVQILGRAGHA-----LDRAVNFGFFD 342 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 FIA+P LM++ Y + N+GIAI++ T+ KL+F+PL K Y S A MK + P + E+R Sbjct: 343 FIARPCLWLMNFLYRYIPNYGIAIIIITLLFKLVFWPLGNKSYKSMAEMKRLAPLMAEIR 402 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 EK+K + + + ++ LY+T+ INPL GC PIL+QIPVFFA Y+++ ++E+RHAPF+G Sbjct: 403 EKYKD-DRKKMNEEVMNLYRTYKINPLGGCLPILVQIPVFFAFYRMLYQAIELRHAPFFG 461 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 WI DL+A D +F LP P + + + I+M +M IQ K+ PP D QA I+ Sbjct: 462 WINDLSAPD--RLFNFDVSLPLIAPP-VGIPVLTIVMGATMIIQQKLQPPMGDPTQAKIM 518 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 MP+ F F +FP+GL++YW +N ISI QQ I + + Sbjct: 519 MLMPIFFTFIFINFPSGLVLYWLVNNTISIFQQYYITRKN 558 >gi|198282181|ref|YP_002218502.1| 60 kDa inner membrane insertion protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665291|ref|YP_002424546.1| inner membrane protein, 60 kDa [Acidithiobacillus ferrooxidans ATCC 23270] gi|198246702|gb|ACH82295.1| 60 kDa inner membrane insertion protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517504|gb|ACK78090.1| inner membrane protein, 60 kDa [Acidithiobacillus ferrooxidans ATCC 23270] Length = 528 Score = 303 bits (776), Expect = 4e-80, Method: Composition-based stats. Identities = 155/566 (27%), Positives = 252/566 (44%), Gaps = 42/566 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ +A+AL+V++ +Q + P+ +++ V Sbjct: 1 MDNQK-TILAVALAVVVFLLFQAWQEQNAPKPAAGPAVSRSVTAPGATATSPAPVDVVPA 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + V + G I+L G +L LR Y V +P L + Sbjct: 60 SAGGLPPATGAAVSFQTQVFTGRISLNGGDIQNLGLRHYPQAVDDTAPYPLL-------D 112 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 A L + + T T PI L K + + + Y Sbjct: 113 GAPARLTIQQSGFVSSDGQTLTARFAAPAGQTTAGQPIVLTGKAGPLTVEKTWTFQPDSY 172 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 + + T+TN+ S +I+R+ + G + + + E +SDI Sbjct: 173 VAEEHVTITNSGSAPWNGSYFDQILRNDRTETHMFMSIFTGAVLMH-QGNFSEVSFSDIH 231 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + W G+ D Y+ + +PS + Y A S T+ P Sbjct: 232 DHPVLK--SGPGWAGMMDHYFLTAILPSAHAQVQVYAR---PSGTNYVAGVSTPLPTLAP 286 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 G+S T T LF G K T+ + E +D+GWF IA+PM +++++F+ LVG Sbjct: 287 GQSTTITQQLFLGPKRQQTLAAMGR-----GLEQTVDYGWFAIIAEPMHVVLTWFHGLVG 341 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI+L + VK +FF + Y S ANM+ +QPK+++L+++ Q L AM++L Sbjct: 342 NWGLAIILLVIVVKSIFFYPSAISYRSMANMRKLQPKLEKLKQEVGD-DRQKLGAAMMEL 400 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y++ +NP+AGC PI+LQ+P F A+Y V+ S+ +R APF WI DLA DP Sbjct: 401 YRSEKVNPMAGCLPIILQMPFFIALYWVLVESVSLRQAPFILWIHDLAIPDPYF------ 454 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 I P++M +SMF Q +++P P D Q I++ +PVVF S FPAGL Sbjct: 455 -------------ILPLLMGISMFFQQRLNPAPVDPMQKRIMSALPVVFAVFFSFFPAGL 501 Query: 539 IIYWSWSNVISIVQQAVIMK-MHGAE 563 ++YW +NV+SI QQ +I + + A+ Sbjct: 502 VLYWLTNNVVSIGQQYLITRHIMKAK 527 >gi|118603000|ref|YP_904215.1| protein translocase subunit yidC [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166977411|sp|A1AXT7|OXAA_RUTMC RecName: Full=Inner membrane protein oxaA gi|118567939|gb|ABL02744.1| protein translocase subunit yidC [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 541 Score = 303 bits (776), Expect = 4e-80, Method: Composition-based stats. Identities = 131/573 (22%), Positives = 245/573 (42%), Gaps = 49/573 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF------------YVYPRIEEMNNERKNIQTVKQPNQ 48 M N+ + +A+ + + W + +I++ + ++ Sbjct: 1 MNNQKNFLI-VAIFLSVFLLWDKWGVTHVVGANGNLISQTKIKDASTINNSLTNKNLNAS 59 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A L + +P + L I+ KG + L Y ++++S Sbjct: 60 SIIHRNAELDLPNTITKNQAPFTTVVTDLLTLEISHKGGTIQNAWLNDYPIEINSEQKFQ 119 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L SN + F + +S ++ + + +K+ N I Sbjct: 120 LL---SNKADEIFQAQSGLLPQGQTPTHHSIFSSKNSHYQMDGNSLVVPFTWKSENGIKV 176 Query: 169 ERTISLDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 + +++ I +TN + + + + +++R+ + G Sbjct: 177 IKRYHFNKNSYVIGIDYQITNTTNNTLNITSYTQLVRNALDQSNMIIPTYTGGARFDDQD 236 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + ++ D W+ + + Y+ IP K ++ Y Sbjct: 237 VYEKIEFEDFNDQP--KTTSKGGWIAMIEHYFFVAAIPDVNQIHTYSSKIINGE---YLL 291 Query: 288 KFSANEITILPGKSITT-TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 E+ I PG +T ++ L+ G KE I++ P + +D+G + IAKP+ Sbjct: 292 TVVNPELVIAPGAIVTLPSSSLYIGPKEQKQINNVA-----PGLDKTVDYGVLFIIAKPL 346 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 L+++ Y+++ ++G +I+ T+ +KL F+ L++K Y S A M+ + P++ +L+E + Sbjct: 347 SELLNWIYSIIHSWGYSIITLTLLIKLAFYKLSEKSYRSMAGMRQLAPRLTKLKETYGDD 406 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q L + ++LYK INP +GC PIL+QIPVF ++Y V+ +E+R AP + ++ DL+ Sbjct: 407 K-QKLGQKTMELYKKEKINPASGCLPILVQIPVFISLYWVLLEMVELRQAP-FWYLTDLS 464 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 A DP I P+IM +SMF Q K++PPP D QA I+ +P V Sbjct: 465 AQDPYY-------------------ILPLIMGVSMFAQQKLNPPPPDPMQAKIMMALPFV 505 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 F FP+GL++YW +N++SI QQ VI K Sbjct: 506 FTIFFLWFPSGLVLYWVVNNILSITQQWVINKR 538 >gi|85858985|ref|YP_461187.1| 60 kDa inner membrane protein [Syntrophus aciditrophicus SB] gi|123516274|sp|Q2LSF9|OXAA_SYNAS RecName: Full=Inner membrane protein oxaA gi|85722076|gb|ABC77019.1| 60 kDa inner membrane protein [Syntrophus aciditrophicus SB] Length = 544 Score = 303 bits (776), Expect = 5e-80, Method: Composition-based stats. Identities = 133/530 (25%), Positives = 219/530 (41%), Gaps = 30/530 (5%) Query: 30 IEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89 + +P+ + + + P KG Sbjct: 42 VVNPAAPVSPQTPADEPSSGSAANPETAAALPVDGTEKEQEITVDTPLYQAVFTTKGGAL 101 Query: 90 DDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI 149 L+ Y ++ NS + L+ S+ + I K Sbjct: 102 KSFALKNYRETLAVNSKPIELVDVKEAMPYPLGISFPASSVDVSPASFFKADVPAIDLKS 161 Query: 150 LTPTTPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208 + + + V I E+ + + Y + N S + ++ Sbjct: 162 TSESRRLTFVQTWPGKIKIEKIYTFNPGKYAIDLEIRTYNLSEVPLSQEIALFWNQYVDP 221 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 +A G ++ + E+ S+ SW G KY+ + IP Sbjct: 222 SAKEDSYGHTGPVSYVAKDVEREKVTKMETPKSLG---PDVSWGGFESKYFIAAMIPQNP 278 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + D + I PG++ T LF G K++ + K + Sbjct: 279 SLTSLSLS--KDSSNMVSTSLKGPKNIIPPGQAGFFTYKLFLGPKDYNIL----KAQGVG 332 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + W ++A P+ + + + YN V N+GIAI++ T+ +K+LF+PL K Y S Sbjct: 333 LENAIDFGSWLKWLAMPLLLSLKFLYNYVHNYGIAIIILTILIKILFWPLGNKSYKSMKE 392 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QPK+ ELREK+K L + + LYK + +NP+ GC P+++QIPVFF +YK + Sbjct: 393 MQKLQPKMLELREKYKNDKA-RLSQETMALYKAYKVNPMGGCLPMIIQIPVFFGLYKALL 451 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 ++E+RH+PF+ WI+DL+A DP I PIIM +MF+Q KM+ Sbjct: 452 YAIELRHSPFFLWIQDLSAKDPYY-------------------ITPIIMGATMFLQQKMT 492 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P D QA I+ WMPV+F F +FP+GL+IYW ++N++SI QQ I K Sbjct: 493 PVSGDPTQAKIMLWMPVIFTFMFLNFPSGLVIYWLFNNILSIGQQYYINK 542 >gi|221201819|ref|ZP_03574856.1| inner membrane protein OxaA [Burkholderia multivorans CGD2M] gi|221207675|ref|ZP_03580683.1| inner membrane protein OxaA [Burkholderia multivorans CGD2] gi|221172521|gb|EEE04960.1| inner membrane protein OxaA [Burkholderia multivorans CGD2] gi|221178239|gb|EEE10649.1| inner membrane protein OxaA [Burkholderia multivorans CGD2M] Length = 543 Score = 302 bits (773), Expect = 9e-80, Method: Composition-based stats. Identities = 135/494 (27%), Positives = 219/494 (44%), Gaps = 32/494 (6%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 V+ G I+ +G L L+ + + L + Y A + Sbjct: 72 VKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPD--LYITLFDHTAGHTYLARTGLLGDF 129 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNN 189 N + S T + + +T + Y+ + + N Sbjct: 130 PNHNDVYTQVNAGPTSLSGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDNV 189 Query: 190 SIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE- 247 + + ++R T F G K + +SD++K+ Sbjct: 190 GTTPVTPTLYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKINFSDLDKNKADYVTSA 249 Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 N W+ + Y+AS +IP + + Y+ I PG+S+ Sbjct: 250 DNGWVAMVQHYFASAWIPQQGA--KRDIYAEKIDPSLYRVGVKQPVAAIAPGQSVDVQAR 307 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 LFAG +E + P E++ D+GW IAKP+F L+ ++ VGN+G AI+L Sbjct: 308 LFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGWAIVLL 362 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 T+ +K +FFPL+ Y S A MK I P++ LRE+FK PQ + A+++LYKT +NP Sbjct: 363 TLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKN-DPQKMNAALMELYKTEKVNPF 421 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 422 GGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYF--------------- 466 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 I P++M++SM++Q ++P P D QA ++ +MP+ F FPAGL++Y+ +NV Sbjct: 467 ----ILPVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNV 522 Query: 548 ISIVQQAVIMKMHG 561 +SI QQ I + G Sbjct: 523 LSIAQQYYITRKLG 536 >gi|78067989|ref|YP_370758.1| putative inner membrane protein translocase component YidC [Burkholderia sp. 383] gi|123567331|sp|Q39BQ2|OXAA_BURS3 RecName: Full=Inner membrane protein oxaA gi|77968734|gb|ABB10114.1| protein translocase subunit yidC [Burkholderia sp. 383] Length = 555 Score = 302 bits (773), Expect = 1e-79, Method: Composition-based stats. Identities = 139/578 (24%), Positives = 234/578 (40%), Gaps = 47/578 (8%) Query: 1 MERNWNYFVAIALSVIIVYA--WQ-------NFYVYPRIEEMNNERKNIQTVKQPNQVDN 51 M+ I ++ WQ F+ Sbjct: 1 MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAAGGASGTGATTTTAG 60 Query: 52 SYAAVLIDDRAQALS---MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 A + + V+ G I+ +G L L+ P + Sbjct: 61 EVPAAAAGAAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDL 117 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANN 165 + +T + + + + T N + + +KL F+ Sbjct: 118 YITLFDHTAGHTYLARSGLLGGDFPNHNDVYTQLNPGTTSLTGDQNALKLSFESPVKGGV 177 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVL 224 + + Y+ + + N + + ++R T F G Sbjct: 178 KVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYT 237 Query: 225 GDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 K + +SD++K+ N W+ + Y+AS +IP + Sbjct: 238 DAKHFQKINFSDLDKNKADYVTSADNGWVAMVQHYFASAWIPQQG--VKRDIYAEKIDPT 295 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y+ I PG+S LFAG +E + P E++ D+GW IA Sbjct: 296 LYRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIA 350 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F L+ ++ +GN+G +I+L T+ +K +FFPL+ Y S A MK I P++ LRE+F Sbjct: 351 KPLFWLLEKIHSYIGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERF 410 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 +S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ S+EMR AP+ WI Sbjct: 411 -KSDPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIH 469 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 DL+ DP I P++M++SM++Q ++P P D QA ++ +M Sbjct: 470 DLSQRDPFF-------------------ILPVLMAVSMYVQTSLNPTPPDPVQAKMMKFM 510 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 511 PIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLG 548 >gi|328675234|gb|AEB27909.1| OxaI/YidC membrane insertion protein [Francisella cf. novicida 3523] Length = 551 Score = 302 bits (772), Expect = 1e-79, Method: Composition-based stats. Identities = 141/574 (24%), Positives = 251/574 (43%), Gaps = 54/574 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ + ++ +E +N + N+ + A Sbjct: 10 LLVTIAIMFISLMGKWEQTFPADNTKQQTSETQNNSHYDNADATTNTNITAADAKSSLAK 69 Query: 66 SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + ++L +L+ Y + + +P+ L S ++ Sbjct: 70 ETNFSKYDNAKSITINTGVFKDLKVSLLDGAIISASLKDYTISLDDKTPMSLLTDKSGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y A+ V I + + K + L + D Sbjct: 130 --YIAKSTIVVNKQPISIN-----FESQGIKTENGKQILTLTANTDGLQIIRTYTFDDTK 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231 Y + ++ N + + R + G S + Sbjct: 183 YNITVSQSIKNTTSAPVNLIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242 Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + DI K++ + W+ Y+ S +IP +++ Y + ++A Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGDVFEAG 299 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 +TI P +S ++ L+ G + P E +D+G F ++ +F Sbjct: 300 AFTG-VTIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + P++M LSMF+Q K+SP PAD QA ++ ++PV+F Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|285019933|ref|YP_003377644.1| inner-membrane protein oxaa [Xanthomonas albilineans GPE PC73] gi|283475151|emb|CBA17650.1| probable inner-membrane protein oxaa [Xanthomonas albilineans] Length = 575 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 124/587 (21%), Positives = 236/587 (40%), Gaps = 54/587 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + + L V + W + + + A + Sbjct: 1 MNQTRLFLIFAWLMVAALL-WMEWSKEHSPAASATSSAATTALPPASATSAGTAGMPPIP 59 Query: 61 RAQALSMSP----------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 RA RV + L +++ G+ D +L Y + Sbjct: 60 RANVPGAGSGAGTTAETAAPAAGATRVTVTTDVLRLTMD--GSSVLDADLLMYPQTQQPS 117 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVF 160 SP V LL+ + + Y A ++ N+ + + + + V+ Sbjct: 118 SPPVQLLT-EDALHPYNAISGWIGERNSPSPSLGGFRPEQPGKEYVLAKGQDSLEVPFVW 176 Query: 161 KNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV--- 216 + I R +L HY ++ D + N+ + ++ R + Sbjct: 177 NGPSGISIRRVYTLQPGHYAVQVRDEIVNHGSKPWQGYVFRKLSRVPTIVSRGMTNPDSF 236 Query: 217 -QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G + + D N S W+ + ++ + +IP + Sbjct: 237 SFNGATWFSPQDGYQRRAFKDYLADGPLNQTISGGWIAVLQHHFFTSWIPQADQQSVYLL 296 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + + + ++PG +T L+ G K I + + R Sbjct: 297 S---NEGPLHVIEARGPAFVVVPGGHASTEARLWVGPKLVNQIAKEQVK-GLDRVVDYSR 352 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + +F ++S+ + L+GN+G +I+ + +KLL +PL+ QY S+A ++ QP+ Sbjct: 353 FSLMALLGQGLFWILSHLHALLGNWGWSIVGLVLLLKLLLYPLSSAQYKSSAKLRKFQPR 412 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + +L+E++ Q LQ AM++LYK INP+ GC P+L+Q+P+FFA+Y V+ S+E+R Sbjct: 413 MQQLKERYGDDK-QKLQTAMMELYKKEKINPMGGCLPVLIQMPIFFALYWVLVESVELRQ 471 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADK 514 AP++ WI+DL A DP I P+I + M + K++P P D Sbjct: 472 APWFAWIQDLTARDPYF-------------------ILPVINAAVMLLTQKLTPTPGMDP 512 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 QA ++ +MP+VF ++ P+GL++YW + + ++QQ + K HG Sbjct: 513 AQAKMMQFMPLVFGVMMAFVPSGLVLYWVTNGSLGLLQQWWMNKRHG 559 >gi|66770623|ref|YP_245385.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. campestris str. 8004] gi|81303430|sp|Q4UNK8|OXAA_XANC8 RecName: Full=Inner membrane protein oxaA gi|66575955|gb|AAY51365.1| 60 kDa inner-membrane protein [Xanthomonas campestris pv. campestris str. 8004] Length = 573 Score = 301 bits (770), Expect = 2e-79, Method: Composition-based stats. Identities = 123/592 (20%), Positives = 229/592 (38%), Gaps = 56/592 (9%) Query: 1 MERNWNYFVAIALS--VIIVYAWQNFYVYPRIEEMNNERK-----------------NIQ 41 M + + + L ++ W + + Q Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKDKAPANAPTPIASQAVPAARDPDAAAPAANVPSAQ 60 Query: 42 TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 + Q A +P + L + L ++ G D L + Sbjct: 61 AIPQAGSPAAVPATSTTTATPATTGAAPAITLTSDVLRLKLD--GRSVLDAELLQFPQTK 118 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKL 158 P+ L + + Y A + S + + + T + Sbjct: 119 DGTEPVKLL--TEDAAHPYNATSGWASERSPVPGVGGFRAEQPGTTFELAKGQNTLVVPF 176 Query: 159 VFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV- 216 V+ N + R +L Y I D V N S ++ R + Sbjct: 177 VWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNGYVFRKLSRVPTILSRGMTNPD 236 Query: 217 ---QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 G + + + D N + W+ + ++ + +IP K+ + Sbjct: 237 SFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ---A 293 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 L+ R A+ T+ PG+S +T L+ G K + E + R Sbjct: 294 SLYVLAQDGPRDVAELRGPAFTVAPGQSASTEARLWVGPKLVSLLAK-EDVKGLDRVVDY 352 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY S A M+ Q Sbjct: 353 SRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQ 412 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ +L+E++ Q Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V+ S+E+ Sbjct: 413 PRLAQLKERYGD-DRQKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVEL 471 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512 R AP+ GWI+DL A DP I P++ M+ K++P P Sbjct: 472 RQAPWLGWIQDLTARDPYF-------------------ILPVLNIAIMWATQKLTPTPGM 512 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 513 DPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 564 >gi|221214579|ref|ZP_03587549.1| inner membrane protein OxaA [Burkholderia multivorans CGD1] gi|221165469|gb|EED97945.1| inner membrane protein OxaA [Burkholderia multivorans CGD1] Length = 544 Score = 301 bits (770), Expect = 2e-79, Method: Composition-based stats. Identities = 135/496 (27%), Positives = 222/496 (44%), Gaps = 35/496 (7%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 V+ G I+ +G L L+ P + + +T + + Sbjct: 72 VKFSTDVYDGEIDTRGGTLAKLTLKK---QGDGKQPDLYITLFDHTAGHTYLARTGLLGG 128 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFK---NANNILFERTISLDEHYLFKIVDTVT 187 + + T N + +KL F+ + + Y+ + + Sbjct: 129 DFPNHNDVYTQVNAGPTSLSGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKID 188 Query: 188 NNSIDQIRFSPRGRIMRHKPQTATNTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 N + + ++R T F G K + +SD++K+ Sbjct: 189 NVGTTPVTPTLYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKINFSDLDKNKADYVT 248 Query: 247 E-SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 N W+ + Y+AS +IP + + Y+ I PG+S+ Sbjct: 249 SADNGWIAMVQHYFASAWIPQQG--VKRDIYAEKIDPSLYRVGVKQPVAAIAPGQSVDVQ 306 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 LFAG +E + P E++ D+GW IAKP+F L+ ++ VGN+G AI+ Sbjct: 307 ARLFAGPEEERMLEGIA-----PGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGWAIV 361 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 L T+ +K +FFPL+ Y S A MK I P++ LRE+FK PQ + A+++LYKT +N Sbjct: 362 LLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKN-DPQKMNAALMELYKTEKVN 420 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P GC P+++QIPVF ++Y V+ S+EMR AP+ WI DL+ DP Sbjct: 421 PFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPYF------------- 467 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 I P++M++SM++Q ++P P D QA ++ +MP+ F FPAGL++Y+ + Sbjct: 468 ------ILPVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVN 521 Query: 546 NVISIVQQAVIMKMHG 561 NV+SI QQ I + G Sbjct: 522 NVLSIAQQYYITRKLG 537 >gi|118496688|ref|YP_897738.1| membrane protein of unknown function [Francisella tularensis subsp. novicida U112] gi|194323997|ref|ZP_03057772.1| 60Kd inner membrane protein [Francisella tularensis subsp. novicida FTE] gi|166975866|sp|A0Q419|OXAA_FRATN RecName: Full=Inner membrane protein oxaA gi|118422594|gb|ABK88984.1| conserved membrane protein of unknown function [Francisella novicida U112] gi|194321894|gb|EDX19377.1| 60Kd inner membrane protein [Francisella tularensis subsp. novicida FTE] Length = 551 Score = 300 bits (768), Expect = 4e-79, Method: Composition-based stats. Identities = 140/574 (24%), Positives = 248/574 (43%), Gaps = 54/574 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ + ++ + +N + N+ + A Sbjct: 10 LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69 Query: 66 SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + ++L +L+ Y + + +P+ L S ++ Sbjct: 70 ETNFSKYDNAKSITINTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y A+ V I + + K + L + D Sbjct: 130 --YIAKSTIVVNKQPISVN-----FEDQGIKTENGKQILTLTGSADGLQITRTYTFDDTK 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231 Y + + N + + R + G S + Sbjct: 183 YNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242 Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + DI K++ + W+ Y+ S +IP +++ Y + ++A Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGDVFEAG 299 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 TI P +S ++ L+ G + P E +D+G F ++ +F Sbjct: 300 AFTGA-TIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + P++M LSMF+Q K+SP PAD QA ++ ++PV+F Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|56707390|ref|YP_169286.1| inner-membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110669861|ref|YP_666418.1| inner-membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134302668|ref|YP_001122637.1| inner-membrane protein of unknown function [Francisella tularensis subsp. tularensis WY96-3418] gi|224456465|ref|ZP_03664938.1| hypothetical protein FtultM_01268 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370910|ref|ZP_04986915.1| inner-membrane protein [Francisella tularensis subsp. tularensis FSC033] gi|254874228|ref|ZP_05246938.1| inner-membrane protein [Francisella tularensis subsp. tularensis MA00-2987] gi|81677123|sp|Q5NI56|OXAA_FRATT RecName: Full=Inner membrane protein oxaA gi|122971083|sp|Q14JK8|OXAA_FRAT1 RecName: Full=Inner membrane protein oxaA gi|166975867|sp|A4J015|OXAA_FRATW RecName: Full=Inner membrane protein oxaA gi|56603882|emb|CAG44866.1| Inner-membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320194|emb|CAL08249.1| Inner-membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134050445|gb|ABO47516.1| inner-membrane protein of unknown function [Francisella tularensis subsp. tularensis WY96-3418] gi|151569153|gb|EDN34807.1| inner-membrane protein [Francisella tularensis subsp. tularensis FSC033] gi|254840227|gb|EET18663.1| inner-membrane protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282158529|gb|ADA77920.1| hypothetical protein NE061598_01330 [Francisella tularensis subsp. tularensis NE061598] Length = 551 Score = 300 bits (767), Expect = 5e-79, Method: Composition-based stats. Identities = 141/574 (24%), Positives = 249/574 (43%), Gaps = 54/574 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ + ++ + +N + N+ + A Sbjct: 10 LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69 Query: 66 SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + ++L +L+ Y + + +P+ L S ++ Sbjct: 70 ETNFSKYDNAKSITINTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y A+ V I + + KI + L + D Sbjct: 130 --YIAKSTIVVNKQPISVN-----FEDQGIKIENGKQILTLTGSADGLQITRTYTFDDTK 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231 Y + + N + + R + G S + Sbjct: 183 YNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242 Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + DI K++ + W+ Y+ S +IP +++ Y + ++A Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGDVFEAG 299 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 TI P +S ++ L+ G + P E +D+G F ++ +F Sbjct: 300 AFTGA-TIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + P++M LSMF+Q K+SP PAD QA ++ ++PV+F Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|187932218|ref|YP_001892203.1| hypothetical membrane protein [Francisella tularensis subsp. mediasiatica FSC147] gi|254772786|sp|B2SE60|OXAA_FRATM RecName: Full=Inner membrane protein oxaA gi|187713127|gb|ACD31424.1| hypothetical membrane protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 551 Score = 300 bits (767), Expect = 5e-79, Method: Composition-based stats. Identities = 141/574 (24%), Positives = 249/574 (43%), Gaps = 54/574 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ + ++ + +N + N+ + A Sbjct: 10 LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69 Query: 66 SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + ++L +L+ Y + + +P+ L S ++ Sbjct: 70 ETNFSKYDNAKSITINTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y A+ V I + + KI + L + D Sbjct: 130 --YIAKSTIVVNKQPISVN-----FEDQGIKIENGKQILTLTGSADGLQITRTYTFDDTK 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231 Y + + N + + R + G S + Sbjct: 183 YNISVSQNIKNTTSAPVNVIVDDSFARGFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242 Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + DI K++ + W+ Y+ S +IP +++ Y + ++A Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGDVFEAG 299 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 TI P +S ++ L+ G + P E +D+G F ++ +F Sbjct: 300 AFTGA-TIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + P++M LSMF+Q K+SP PAD QA ++ ++PV+F Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|21233657|ref|NP_639574.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|38503060|sp|Q8P338|OXAA_XANCP RecName: Full=Inner membrane protein oxaA gi|21115530|gb|AAM43456.1| 60kDa inner-membrane protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 573 Score = 299 bits (766), Expect = 6e-79, Method: Composition-based stats. Identities = 123/592 (20%), Positives = 229/592 (38%), Gaps = 56/592 (9%) Query: 1 MERNWNYFVAIALS--VIIVYAWQNFYVYPRIEEMNNERK-----------------NIQ 41 M + + + L ++ W + + Q Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKDKAAANAPTPIASQAVPAARDPDAAAPAANVPSAQ 60 Query: 42 TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 + Q A +P + L + L ++ G D L + Sbjct: 61 AIPQAGSPAAVPATSTTTATPATTGAAPAITLTSDVLRLKLD--GRSVLDAELLQFPQTK 118 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKL 158 P+ L + + Y A + S + + + T + Sbjct: 119 DGTEPVKLL--TEDAAHPYNATSGWASERSPVPGVGGFRAEQPGTTFELAKGQNTLVVPF 176 Query: 159 VFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV- 216 V+ N + R +L Y I D V N S ++ R + Sbjct: 177 VWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNGYVFRKLSRVPTILSRGMTNPD 236 Query: 217 ---QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 G + + + D N + W+ + ++ + +IP K+ + Sbjct: 237 SFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ---A 293 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 L+ R A+ T+ PG+S +T L+ G K + E + R Sbjct: 294 SLYVLAQDGPRDVAELRGPAFTVAPGQSASTEARLWVGPKLVSLLAK-EDVKGLDRVVDY 352 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY S A M+ Q Sbjct: 353 SRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQ 412 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ +L+E++ Q Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V+ S+E+ Sbjct: 413 PRLAQLKERYGD-DRQKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVEL 471 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512 R AP+ GWI+DL A DP I P++ M+ K++P P Sbjct: 472 RQAPWLGWIQDLTARDPYF-------------------ILPVLNIAIMWATQKLTPTPGM 512 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 513 DPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 564 >gi|254372056|ref|ZP_04987549.1| hypothetical protein FTCG_01195 [Francisella tularensis subsp. novicida GA99-3549] gi|151569787|gb|EDN35441.1| hypothetical protein FTCG_01195 [Francisella novicida GA99-3549] gi|328676141|gb|AEB27011.1| OxaI/YidC membrane insertion protein [Francisella cf. novicida Fx1] Length = 551 Score = 299 bits (766), Expect = 6e-79, Method: Composition-based stats. Identities = 140/574 (24%), Positives = 248/574 (43%), Gaps = 54/574 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ + ++ + +N + N+ + A Sbjct: 10 LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69 Query: 66 SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + ++L +L+ Y + + +P+ L S ++ Sbjct: 70 ETNFSKYDNAKSITINTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y A+ V I + + K + L + D Sbjct: 130 --YIAKSTIVVNKQPISVN-----FEDQGIKTENGKQILTLTGSADGLQITRTYTFDDTK 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231 Y + + N + + R + G S + Sbjct: 183 YNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242 Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + DI K++ + W+ Y+ S +IP +++ Y + ++A Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGNVFEAG 299 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 TI P +S ++ L+ G + P E +D+G F ++ +F Sbjct: 300 AFTGA-TIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + P++M LSMF+Q K+SP PAD QA ++ ++PV+F Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|238021627|ref|ZP_04602053.1| hypothetical protein GCWU000324_01529 [Kingella oralis ATCC 51147] gi|237866241|gb|EEP67283.1| hypothetical protein GCWU000324_01529 [Kingella oralis ATCC 51147] Length = 568 Score = 299 bits (765), Expect = 7e-79, Method: Composition-based stats. Identities = 134/583 (22%), Positives = 258/583 (44%), Gaps = 64/583 (10%) Query: 1 MERN-----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 M++ A++++ + AWQ+F+ + ++ ++ + + Sbjct: 1 MQQQNPSDFKRMLTTAAVAIVFMMAWQHFFPAAQPQQQQAAQQQQTAAQPQAAPLGATVP 60 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 V ++ ++ +I+ K L L+ Y + L Sbjct: 61 ---------------VSVETDTVKATIDEKSGDLRGLTLQHYDATHDTAQSFT--LFADG 103 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL- 174 Y A+ + V N L N+N S + ++L N + ++ + Sbjct: 104 KPLTYVAQSNLVDANGNNILANANFQAASKSQTLNGDKLEVRLTAPAQNGVQVDKIYTFT 163 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF----------IAVL 224 YL + V N S ++ +I+R + A + Sbjct: 164 KGSYLVNVRFEVKNTSSQAVKLGTSYQIVRDNSKPAGEGWFTSSYVGPVLYTPDADAFQK 223 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI--PSKETSFHS----QFKYL 278 + +++ + + ++ S ++G+ Y+AS +I P + + Sbjct: 224 VQFATLDKDFEAGKDTAEYQRKASGGYVGMIQHYFASAWIMQPENGENLCTGGSCTIGIK 283 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 Y A + + I G S T L+AG + + P+FE+ D+G Sbjct: 284 RLPSNLYSAGVNTAAVDIPAGGSKTFAANLYAGPQVTSILKTIA-----PKFELTKDYGR 338 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + A P+F L+++ + ++GN+G AI++ T+ VK + FPL +K Y S A M++IQPK++ Sbjct: 339 VHIFASPLFALLNWLHGIIGNWGWAIIVLTLIVKAILFPLNQKAYKSMAKMRSIQPKMEA 398 Query: 399 LREKFKQSPPQV-LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L++K+ ++ +Q+ +++LY+ INPL GC P+L+Q+P+F +Y +I +S+E+R AP Sbjct: 399 LKKKYPNPEDRMAMQQELMKLYRDEKINPLGGCLPMLIQMPIFIGLYWMIFLSVELRQAP 458 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + GWI DL+ DP I PI+M+++M++Q KMSPPP+D QA Sbjct: 459 WLGWIHDLSRPDPFY-------------------ILPILMAVTMYLQTKMSPPPSDPTQA 499 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ MP++F FPA L++Y+ +N+++I QQ +I + Sbjct: 500 QMMKIMPLMFSVMFFFFPAALVLYYVVNNLLTIAQQWLINRQT 542 >gi|325915704|ref|ZP_08178009.1| protein translocase subunit yidC [Xanthomonas vesicatoria ATCC 35937] gi|325538121|gb|EGD09812.1| protein translocase subunit yidC [Xanthomonas vesicatoria ATCC 35937] Length = 574 Score = 299 bits (765), Expect = 8e-79, Method: Composition-based stats. Identities = 124/595 (20%), Positives = 232/595 (38%), Gaps = 61/595 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + + L V + W + + Q+V D S A + Sbjct: 1 MNQTRVFLIFAWLMVAALL-WMEW-GKDKAAANAPAVVATQSVPAARDPDASAPAANVPA 58 Query: 61 RAQALSMSPR----------------------VELKNPSLIGSINLKGAQFDDLNLRGYH 98 + L + L ++ G D L + Sbjct: 59 AQAIPQAGVPGAAPAATSTTTATPAAAGAAPVITLTSDVLRLKLD--GRSVLDAELLQFP 116 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTP 155 +P+ L + + Y A + S + + S T Sbjct: 117 QTKDGTAPVSLL--TEDAVHPYNATSGWASEHSPVPGVGGFRAEQPGSTFELAKGQNTLV 174 Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 + V+ N + RT +L Y I D V N S ++ R + Sbjct: 175 VPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMT 234 Query: 215 GV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 G + + + D N + W+ + ++ + +IP K+ Sbjct: 235 NPDSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ- 293 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + L+ R A+ T+ PG++ +T L+ G K + E + R Sbjct: 294 --ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVS-LIAKEDVKGLDRV 350 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + I + +F ++S+ ++ + N+G +I+ V ++L +PL+ QY S A M+ Sbjct: 351 VDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWSIIGLVVLLRLALYPLSAAQYKSGAKMR 410 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V+ S Sbjct: 411 RFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVES 469 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+R AP+ GWI+DL A DP I P++ M+ K++P Sbjct: 470 VELRQAPWLGWIQDLTARDPYF-------------------ILPVLNIAIMWATQKLTPT 510 Query: 511 P-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 511 PGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 565 >gi|21326646|gb|AAL30086.1| 60Kd inner-membrane protein [Xanthomonas campestris pv. campestris] Length = 573 Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats. Identities = 123/592 (20%), Positives = 230/592 (38%), Gaps = 56/592 (9%) Query: 1 MERNWNYFVAIALS--VIIVYAWQNFYVYPRIEEMNNERK-----------------NIQ 41 M + + + L ++ W + + Q Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKDKAAANAPTPIASQAVPAARDPDAAAPAANVPSAQ 60 Query: 42 TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 + Q A +P + L + L ++ G D L + Sbjct: 61 AIPQAGSPAAVPATSTTTATPATTGAAPAITLTSDVLRLKLD--GRSVLDAELLQFPQTK 118 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTPIKL 158 P+ L + ++Y A + S + + + T + Sbjct: 119 DGTEPVKLL--TEDAAHSYNATSGWASERSPVPGVGGFRAEQPGTTFELAKGQNTLVVPF 176 Query: 159 VFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV- 216 V+ N + R +L Y I D V N S ++ R + Sbjct: 177 VWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNGYVFRKLSRVPTILSRGMTNPD 236 Query: 217 ---QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 G + + + D N + W+ + ++ + +IP K+ + Sbjct: 237 SFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ---A 293 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 L+ R A+ T+ PG+S +T L+ G K + E + R Sbjct: 294 SLYVLAQDGPRDVAELRGPAFTVAPGQSASTEARLWVGPKLVSLLAK-EDVKGLDRVVDY 352 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY S A M+ Q Sbjct: 353 SRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQ 412 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P++ +L+E++ Q Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V+ S+E+ Sbjct: 413 PRLAQLKERYGD-DRQKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVEL 471 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512 R AP+ GWI+DL A DP I P++ M+ K++P P Sbjct: 472 RQAPWLGWIQDLTARDPYF-------------------ILPVLNIAIMWATQKLTPTPGM 512 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 513 DPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 564 >gi|241667555|ref|ZP_04755133.1| hypothetical protein FphipA2_02215 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876100|ref|ZP_05248810.1| inner-membrane protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842121|gb|EET20535.1| inner-membrane protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 551 Score = 298 bits (762), Expect = 2e-78, Method: Composition-based stats. Identities = 141/574 (24%), Positives = 255/574 (44%), Gaps = 54/574 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNER-------KNIQTVKQPNQVDNSYAAVLI 58 V IA+ +I + W+ + + + + T ++ A++ Sbjct: 10 LLVTIAIMLISLMGRWEQTFPSNSSQSQTTQTQQDNSHYNSDTTATTNVSTSDAKASLTK 69 Query: 59 DDRAQALSMSPRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + V + I+L +L Y + + + +P+ L + ++ Sbjct: 70 TTSFSKYDDAKSVTINTDVFKNLKISLLDGAIISASLEDYSVSLDNKTPMALLTNEQGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y A+ V +++ + K + L + D Sbjct: 130 --YIAKSTIVINKKPVDVN-----FESQGIKKENGKQVLTLTGSVDGLEITRTYTFDDAK 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231 Y I + N + + + + R + G + S + Sbjct: 183 YNISISQNIKNTTSEPVNVIIDDSLARDFNPAGDSFSLLNAHSYTFTGVAYSTANDSFRK 242 Query: 232 QKYSDIEKSSISNFHESN---SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + DI K++ ++ W+ Y+ S +IP S+ Y + + ++A Sbjct: 243 ESFKDISKTNGQPTVINSQGLGWVAFIQHYFVSAWIPQSND---SKIYYKNLNNDVFEAG 299 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 I+I P +S + + L++G + P E +D+G F ++ +F Sbjct: 300 AYTG-ISIAPNQSESIDSVLYSGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +M+ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP++ L+E +K Sbjct: 354 VMNQIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRVKRLQETYKD-DR 412 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q L K M+++YK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 413 QALGKKMMEMYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + PI+M +SMF+Q K+SP PAD QA I+ ++PV+F Sbjct: 473 DPYF-------------------VLPILMGISMFLQQKLSPAPADPMQAKIMMFLPVIFT 513 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +NVISI+QQ +I + + A Sbjct: 514 FLFASFPSGLVLYWLTNNVISILQQWIITRHYQA 547 >gi|254375202|ref|ZP_04990682.1| inner-membrane protein [Francisella novicida GA99-3548] gi|151572920|gb|EDN38574.1| inner-membrane protein [Francisella novicida GA99-3548] Length = 551 Score = 298 bits (762), Expect = 2e-78, Method: Composition-based stats. Identities = 139/574 (24%), Positives = 248/574 (43%), Gaps = 54/574 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ + ++ + +N + N+ + A Sbjct: 10 LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69 Query: 66 SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + ++L +L+ Y + + +P+ L S ++ Sbjct: 70 ETNFSKYDNAKSITINTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y A+ V I + + K + L + D Sbjct: 130 --YIAKSTIVVNKQPISVN-----FEDQGIKTENGKQILTLTGSADGLQITRTYTFDDTK 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231 Y + + N + + R + G S + Sbjct: 183 YNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242 Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + DI K++ + W+ Y+ S +IP +++ Y + ++A Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGNVFEAG 299 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 TI P +S ++ L+ G + P E +D+G F ++ +F Sbjct: 300 AFTGA-TIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R +PF WI DL+ Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQSPFIFWIHDLSMK 472 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + P++M LSMF+Q K+SP PAD QA ++ ++PV+F Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|167626982|ref|YP_001677482.1| hypothetical protein Fphi_0760 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189036351|sp|B0TW73|OXAA_FRAP2 RecName: Full=Inner membrane protein oxaA gi|167596983|gb|ABZ86981.1| conserved membrane protein of unknown function [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 551 Score = 298 bits (761), Expect = 2e-78, Method: Composition-based stats. Identities = 140/574 (24%), Positives = 253/574 (44%), Gaps = 54/574 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNER-------KNIQTVKQPNQVDNSYAAVLI 58 V IA+ +I + W+ + + + + ++ A++ Sbjct: 10 LLVTIAIMLISLMGRWEQTFPSNSSQSQTTQTQQDNSHYNSDTPATTNVSTSDAKASLTK 69 Query: 59 DDRAQALSMSPRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + V + I+L +L Y + + +P+ L ++ Sbjct: 70 TTSFSKYDDAKSVTINTDVFKNLKISLLDGAIISASLEDYSVSLDDKTPMALLTDEQGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y A+ V +++ + K + L + D Sbjct: 130 --YIAKSTIVINKKPVDVN-----FESQGIKKENGKQVLTLTGSVDGLEITRTYTFDDAK 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231 Y + + N + + + + R + G + S + Sbjct: 183 YNISVSQNIKNTTSEPVSVIIDDSLARDFNPAGDSFSLLNAHSYTFTGVAYSTANDSFRK 242 Query: 232 QKYSDIEKSSISNFHESN---SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + DI K++ ++ W+ Y+ S +IP S+ Y + + ++A Sbjct: 243 ESFKDISKTNGQPTVINSQGLGWVAFIQHYFVSAWIPQSND---SKIYYKNLNNDVFEAG 299 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 I+I P +S + + L++G + P E +D+G F ++ +F Sbjct: 300 AYTG-ISIAPNQSESIDSVLYSGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +M+ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP++ L+E +K Sbjct: 354 VMNQIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRVKRLQETYKD-DR 412 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 QVL K M+++YK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 413 QVLGKKMMEMYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + PI+M +SMF+Q K+SP PAD QA I+ ++PV+F Sbjct: 473 DPYF-------------------VLPILMGISMFLQQKLSPAPADPMQAKIMMFLPVIFT 513 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +NVISI+QQ +I + + A Sbjct: 514 FLFASFPSGLVLYWLTNNVISILQQWIITRHYQA 547 >gi|148245070|ref|YP_001219764.1| hypothetical protein COSY_0941 [Candidatus Vesicomyosocius okutanii HA] gi|166977423|sp|A5CVI2|OXAA_VESOH RecName: Full=Inner membrane protein oxaA gi|146326897|dbj|BAF62040.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii HA] Length = 541 Score = 298 bits (761), Expect = 3e-78, Method: Composition-based stats. Identities = 142/573 (24%), Positives = 252/573 (43%), Gaps = 49/573 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN---ERKNIQTVKQPNQVDNSYAAVL 57 M +F+ IA+ + I W + + I++ NN + K T N + N + Sbjct: 1 MNNQK-FFLIIAIFLSIFLLWDKWEITHTIDKNNNLISQTKIKNTSTINNSLTNQNLDIP 59 Query: 58 ID---------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 + P +K L I+ KG + L Y +++ S Sbjct: 60 SVTNRNNKLDLPNTDTKNQIPFTTVKTDLLTLEISHKGGTIQNAWLNDYPIEIDSEQKFQ 119 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L + F + + +S I ++ + +K+ N I+ Sbjct: 120 LLSDRTGKI---FQAQSGLLPQGKMPTHHSIFSSKNIYYQMDGNNLVVPFTWKSENGIIV 176 Query: 169 ERTISLDEHYLFK-IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 + +++ I +TN + + + + +++R+ P G Sbjct: 177 NKRYHFNKNSYVVGIDYQITNTTNNTLHITSYTQLIRNIPDQDNMIMPTYTGGARFNDQD 236 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + ++ D W+ + + Y+ IP+ K ++D Y Sbjct: 237 VYEKIEFEDF--DDQPKTSYKGGWMAMIEHYFFVAVIPNLNQIHTYSSKIINDK---YLL 291 Query: 288 KFSANEITILPGKSITT-TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 E++I PG + T + L+ G KE I D P + +D+G + IAKP+ Sbjct: 292 TVVNPELSIAPGATKTIINSNLYIGPKEQSHI-----DNVAPGLDKTVDYGILFIIAKPL 346 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 L+++ Y+++ ++G +I++ T+ +KL F+ L++K Y S A M+ + P++ +L+E + + Sbjct: 347 SELLNWIYSIIHSWGYSIIILTLLIKLAFYKLSEKSYRSMAGMRQLAPRLKKLKETYGDN 406 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q L K ++LYK INP +GC PIL+QIPVF ++Y V+ +E+R AP + ++ DL+ Sbjct: 407 K-QKLGKKTMELYKKEKINPASGCLPILVQIPVFISLYWVLLEMVELRQAP-FWYLTDLS 464 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 A DP I P+IM +SMFIQ K++PPP D QA I+ +P V Sbjct: 465 APDPYY-------------------ILPLIMGISMFIQQKLNPPPPDPIQAKIMMALPFV 505 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 F FP+GL++YW +N++SI QQ VI K Sbjct: 506 FTIFFLWFPSGLVLYWMINNILSITQQWVINKR 538 >gi|89255612|ref|YP_512973.1| inner-membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115314117|ref|YP_762840.1| inner membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|156501560|ref|YP_001427625.1| inner-membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010123|ref|ZP_02275054.1| inner-membrane protein [Francisella tularensis subsp. holarctica FSC200] gi|254367007|ref|ZP_04983043.1| conserved inner-membrane protein [Francisella tularensis subsp. holarctica 257] gi|290953728|ref|ZP_06558349.1| inner membrane protein oxaA [Francisella tularensis subsp. holarctica URFT1] gi|295312914|ref|ZP_06803635.1| inner membrane protein oxaA [Francisella tularensis subsp. holarctica URFT1] gi|122325838|sp|Q0BNY1|OXAA_FRATO RecName: Full=Inner membrane protein oxaA gi|122501296|sp|Q2A5M8|OXAA_FRATH RecName: Full=Inner membrane protein oxaA gi|166975865|sp|A7N9L6|OXAA_FRATF RecName: Full=Inner membrane protein oxaA gi|89143443|emb|CAJ78619.1| Inner-membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115129016|gb|ABI82203.1| inner membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|134252833|gb|EBA51927.1| conserved inner-membrane protein [Francisella tularensis subsp. holarctica 257] gi|156252163|gb|ABU60669.1| inner-membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 551 Score = 297 bits (760), Expect = 3e-78, Method: Composition-based stats. Identities = 141/574 (24%), Positives = 250/574 (43%), Gaps = 54/574 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ + ++ + +N + N+ + + A Sbjct: 10 LLVTIAIMFISLMGKWEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTITDAKSSLAK 69 Query: 66 SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + ++L +L+ Y + + +P+ L S ++ Sbjct: 70 ETNFSKYDNAKSITINTVVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y A+ V I + + KI + L + D Sbjct: 130 --YIAKSTIVVNKQPISVN-----FEDQGIKIENSKQILTLTGSADGLQITRTYTFDDTK 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231 Y + + N + + R + G S + Sbjct: 183 YNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242 Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + DI K++ + W+ Y+ S +IP +++ Y + ++A Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGDVFEAG 299 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 TI P +S ++ L+ G + P E +D+G F ++ +F Sbjct: 300 AFTGA-TIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + P++M LSMF+Q K+SP PAD QA ++ ++PV+F Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|289662287|ref|ZP_06483868.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667652|ref|ZP_06488727.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 574 Score = 297 bits (759), Expect = 4e-78, Method: Composition-based stats. Identities = 127/595 (21%), Positives = 238/595 (40%), Gaps = 61/595 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + + L V + W + + Q+V +D + + Sbjct: 1 MNQTRVFLIFAWLMVAALL-WMEW-GKEKAAANAPVAAATQSVPAARDLDATTPSAANVP 58 Query: 61 RAQALSMS----------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 AQA+ + P V L + L ++ G D L + Sbjct: 59 AAQAIPQAGAPGTVPATSTTGATPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELLQFP 116 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTP 155 +P+ L + + Y A + S + + + T Sbjct: 117 QTKDGTAPVSLL--TEDAAHPYNATSGWASEHSPVPGVGGFRAEQPGTAFELAKGQDTLV 174 Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 + V+ N + RT +L Y I D V N S ++ R + Sbjct: 175 VPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMT 234 Query: 215 GV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 G + + + D N + W+ + ++ + +IP K+ Sbjct: 235 NPDSFSFNGATWYSPQEGYERRAFKDYMNDGGLNRQITGGWMALLQHHFFTAWIPQKDQ- 293 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + L+ R A+ T+ PG++ +T L+ G K + E + R Sbjct: 294 --ASLYVLNQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVG-LIAKEDVKGLDRV 350 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY S A M+ Sbjct: 351 VDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMR 410 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V+ S Sbjct: 411 RFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVES 469 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+R AP+ GWI+DL A DP I P++ M+ K++P Sbjct: 470 VELRQAPWLGWIQDLTARDPYF-------------------ILPLLNISIMWATQKLTPT 510 Query: 511 P-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 511 PGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 565 >gi|254368609|ref|ZP_04984625.1| inner-membrane protein [Francisella tularensis subsp. holarctica FSC022] gi|157121512|gb|EDO65703.1| inner-membrane protein [Francisella tularensis subsp. holarctica FSC022] Length = 551 Score = 296 bits (757), Expect = 6e-78, Method: Composition-based stats. Identities = 141/574 (24%), Positives = 248/574 (43%), Gaps = 54/574 (9%) Query: 7 YFVAIALSVIIVYA-WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 V IA+ I + W+ ++ + +N + N+ + A Sbjct: 10 LLVTIAIMFISLMGKWEQTSPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAK 69 Query: 66 SMS-------PRVELKNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + + ++L +L+ Y + + +P+ L S ++ Sbjct: 70 ETNFSKYDNAKSITINTVVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE 129 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y A+ V I + + KI + L + D Sbjct: 130 --YIAKSTIVVNKQPISVN-----FEDQGIKIENGKQILTLTGSADGLQITRTYTFDDTK 182 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVE 231 Y + + N + + R + G S + Sbjct: 183 YNISVSQNIKNTTSAPVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRK 242 Query: 232 QKYSDIEKSSISNFHES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + DI K++ + W+ Y+ S +IP +++ Y + ++A Sbjct: 243 ESFKDISKTNGQPTVINSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGDVFEAG 299 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 TI P +S ++ L+ G + P E +D+G F ++ +F Sbjct: 300 AFTGA-TIAPNQSENISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFW 353 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +M++ ++LVGN+G+AI+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Sbjct: 354 VMNHIHSLVGNWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DR 412 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q L K M++LYK +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ Sbjct: 413 QALGKKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMK 472 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 DP + P++M LSMF+Q K+SP PAD QA ++ ++PV+F Sbjct: 473 DPYF-------------------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFT 513 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 F +SFP+GL++YW +N+ISI QQ +I + + A Sbjct: 514 FLFASFPSGLVLYWLTNNLISISQQWIITRHYQA 547 >gi|325983266|ref|YP_004295668.1| membrane protein insertase, YidC/Oxa1 family domain containing [Nitrosomonas sp. AL212] gi|325532785|gb|ADZ27506.1| membrane protein insertase, YidC/Oxa1 family domain containing [Nitrosomonas sp. AL212] Length = 642 Score = 296 bits (757), Expect = 7e-78, Method: Composition-based stats. Identities = 143/601 (23%), Positives = 258/601 (42%), Gaps = 50/601 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFY--VYPRIEEMNNERKNIQTVKQ---PNQVDNSY--- 53 + I S +++ W + +YP ++ + ++ Q P V Sbjct: 1 METKKLLLIIIFSTSLLFLWDAWQKELYPPSSQVMPGATSTESSNQRHDPLPVPGDELAA 60 Query: 54 -----------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 V + ++++K +I I+ G L L + Sbjct: 61 SAAESSAVLGIEGVSPSVTPNLFPIGEKIQVKTDMVIAEIDTAGGDIRQLGLIEHPSRED 120 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 N P LL + + L N+ + ++LV Sbjct: 121 INKPYELLLDKTARFQVAQSGLIGDGLPNHKTKYTVEDNKYSYQLEPGQEKVVVRLVAPE 180 Query: 163 ANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIM--RHKPQTATNTFGVQEG 219 A+ I + + Y+ + + N+S I +++ ++P A G Sbjct: 181 ADGIQVTKIYTFHRGSYVIDVEFEIANHSEAAIIPFSYFQMLRDPNEPVGAGALVHSYTG 240 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISN-FHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 D+ ++ K+SD++K+ + N W+ + + Y+ + ++P + K L Sbjct: 241 AAMYTDDEKFLKIKFSDLDKNKAEYPTNADNGWIAMLEHYFLTAWLPEPGSPREYFAKRL 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + Y A A T+ P + + +AG +E + P E+ +D+GW Sbjct: 301 APNQ--YTAGVIAPVGTVEPDRVKNISMPFYAGPQEQNKLAELA-----PGLELTVDYGW 353 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +AKP+F L+S++++ N+GIAI+L T+ VKL+FFPL+ Y S A ++ + PK+ Sbjct: 354 LTVLAKPLFWLLSFYHSWTDNWGIAIILLTLTVKLIFFPLSAAGYRSMAKLRVVTPKLQR 413 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +RE++ S Q + +AM++ YK INP+ GC PIL+QIPVF A++ + ++E+R+AP Sbjct: 414 IREQYA-SDRQRMHQAMMEFYKEEKINPMGGCLPILVQIPVFIALFWTLLAAVELRYAPL 472 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI D++ DP + P+IM +SM++Q K+SP PAD QA Sbjct: 473 ALWITDMSVPDPYY-------------------VLPVIMGVSMWVQSKLSPTPADPIQAK 513 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 ++ MP+ F FP+GL++Y +N++SI QQ I +M+ + K Sbjct: 514 VMQIMPIAFSIFFFFFPSGLVLYSLCNNILSIAQQWQITRMYENKAEEEANKDRNKKKTK 573 Query: 579 N 579 N Sbjct: 574 N 574 >gi|208780038|ref|ZP_03247381.1| 60Kd inner membrane protein [Francisella novicida FTG] gi|208744042|gb|EDZ90343.1| 60Kd inner membrane protein [Francisella novicida FTG] Length = 530 Score = 296 bits (757), Expect = 7e-78, Method: Composition-based stats. Identities = 136/559 (24%), Positives = 242/559 (43%), Gaps = 53/559 (9%) Query: 21 WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS-------PRVEL 73 W+ + ++ + +N + N+ + A + + + Sbjct: 4 WEQTFPADNTKQQTSATQNNSHYDNADSSTNTDVTTTDAKSSLAKETNFSKYDNAKSITI 63 Query: 74 KNPSLI-GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANN 132 ++L +L+ Y + + +P+ L S ++ Y A+ V Sbjct: 64 NTGVFKDVKVSLLDGAIISASLKDYSISLDDKTPMSLLTDKSGSE--YIAKSTIVVNKQP 121 Query: 133 IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSID 192 I + + K + L + D Y + + N + Sbjct: 122 ISVN-----FEDQGIKTENGKQILTLTGSADGLQITRTYTFDDTKYNISVSQNIKNTTSA 176 Query: 193 QIRFSPRGRIMRHKPQTATN------TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 + R + G S ++ + DI K++ Sbjct: 177 PVNVIVDDSFARDFDPAGDSFSLLNAHSYTFTGVAYSTAKDSFRKESFKDISKTNGQPTV 236 Query: 247 ES---NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 + W+ Y+ S +IP +++ Y + ++A TI P +S Sbjct: 237 INSDGQGWVAFLQHYFVSAWIPQS---TNAKIYYKNLNGDVFEAGAFTGA-TIAPNQSEN 292 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 ++ L+ G + P E +D+G F ++ +F +M++ ++LVGN+G+A Sbjct: 293 ISSILYTGPIIKANLVDLA-----PNLEKTLDYGMLSFFSEIIFWVMNHIHSLVGNWGLA 347 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T +KL+F+PL+ K Y S A M+ +QP+I L+E +K Q L K M++LYK Sbjct: 348 IILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD-DRQALGKKMMELYKEEK 406 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPL+GC P+L+QIP+F ++Y V+ S+E+R APF WI DL+ DP Sbjct: 407 VNPLSGCLPMLIQIPIFISLYWVLLESVELRQAPFIFWIHDLSMKDPYF----------- 455 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 + P++M LSMF+Q K+SP PAD QA ++ ++PV+F F +SFP+GL++YW Sbjct: 456 --------VLPVLMGLSMFLQQKLSPAPADPMQAKVMMFLPVIFTFLFASFPSGLVLYWL 507 Query: 544 WSNVISIVQQAVIMKMHGA 562 +N+ISI QQ +I + + A Sbjct: 508 TNNLISISQQWIITRHYQA 526 >gi|21245084|ref|NP_644666.1| inner membrane protein translocase component YidC [Xanthomonas axonopodis pv. citri str. 306] gi|38503062|sp|Q8PEH7|OXAA_XANAC RecName: Full=Inner membrane protein oxaA gi|21110818|gb|AAM39202.1| 60 kDa inner-membrane protein [Xanthomonas axonopodis pv. citri str. 306] Length = 574 Score = 296 bits (757), Expect = 7e-78, Method: Composition-based stats. Identities = 126/595 (21%), Positives = 237/595 (39%), Gaps = 61/595 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + + L V + W + + Q+V +D + + Sbjct: 1 MNQTRVFLIFAWLMVAALL-WMEW-GKDKAAANAPVVAATQSVPAARDLDAATPSAANVP 58 Query: 61 RAQALSMS----------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 AQA+ + P V L + L ++ G D L + Sbjct: 59 AAQAIPQAGAPGAVPATSTTAATPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELLQFP 116 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN---TVWNLISGKILTPTTP 155 +P+ L + + Y A + S + + T Sbjct: 117 QTKDGTAPVSLL--TEDPAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFDMAKGQNTLV 174 Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 + V+ + + RT +L Y I D V N S ++ R + Sbjct: 175 VPFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMT 234 Query: 215 GV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 G + + + D N + W+ + ++ + +IP K+ Sbjct: 235 NPDSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ- 293 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + L+ R A+ T+ PG++ +T L+ G K + E + R Sbjct: 294 --ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVS-LIAKEDVKGLDRV 350 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY S A M+ Sbjct: 351 VDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMR 410 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V+ S Sbjct: 411 RFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVES 469 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+R AP+ GWI+DL A DP I P++ M+ K++P Sbjct: 470 VELRQAPWLGWIQDLTARDPYF-------------------ILPLLNISIMWATQKLTPT 510 Query: 511 P-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 511 PGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 565 >gi|319788688|ref|YP_004148163.1| membrane protein insertase, YidC/Oxa1 family [Pseudoxanthomonas suwonensis 11-1] gi|317467200|gb|ADV28932.1| membrane protein insertase, YidC/Oxa1 family [Pseudoxanthomonas suwonensis 11-1] Length = 567 Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 141/590 (23%), Positives = 241/590 (40%), Gaps = 57/590 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + + L V ++ W + + + A Sbjct: 1 MNQTRVFLILAWLMVAVLL-WMEWGKEQAAPAAAAPAPTTAVAQDAIPQPVAAAPAADGS 59 Query: 61 ---------------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A A + + R+ + L ++ G +L + D + + Sbjct: 60 VPAAAAAALPAAQAEAAPAAASAQRIVASSDVLQLVLD--GGSVVQADLLQFPRDRNGDG 117 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFK 161 V L + Y A+ +VS + S V + + + + V++ Sbjct: 118 TAVRLFDTAPASF-YAAQSGWVSASGAAPTHLSGFVPAEPQREYVLAEGADSVEVPFVWQ 176 Query: 162 NANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP---QTATNTFGVQ 217 N + RT L Y + D V N + +++R P + T+ Sbjct: 177 GDNGVQIRRTYVLSRGAYAVTVRDEVVNAGSAPWQGQVYRQLVRKPPVIERGYTSPESFS 236 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 A + D + N SN W+ + ++ + ++P+ + Sbjct: 237 FNGAAWYDGSYDRRKFDEDYIEDGKLNLQTSNGWVAMLQHHFFTAWLPAGTQQ--AGTIS 294 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 L R + AN + + PG + T+ L+ G K I +P E +D+ Sbjct: 295 LDQVGDRALVREVANPLVVAPGSTATSEARLYVGPKLVSEIRAQ----GVPGLERAVDYS 350 Query: 338 WFYFIA---KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 F +A + +F ++S+ Y+L GN+G AI+ V VK L +PL+ QY S A M+ QP Sbjct: 351 QFTILAVLGEGLFWVLSHMYDLFGNWGWAIIGLVVVVKALMYPLSAAQYKSFAKMRKFQP 410 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +I +L+E++ Q Q AM++LYK INP+ GC PIL+Q+PVF A+Y V+ S+E+R Sbjct: 411 RIQQLKERY-GEDRQKFQMAMMELYKKEKINPMGGCLPILVQMPVFLALYWVLVESVELR 469 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-AD 513 HAP+ WI+DL A DP I P+I M+ K+ P P D Sbjct: 470 HAPWILWIQDLTARDPFF-------------------ILPVINVAVMWFTQKLQPAPGMD 510 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q ++ +MP+VF ++ FPAGL++YW + + ++QQ +MK HG Sbjct: 511 PMQQKMMQFMPLVFGVMMAFFPAGLVLYWVTNGALGLLQQWWMMKRHGEP 560 >gi|298528960|ref|ZP_07016363.1| membrane protein insertase, YidC/Oxa1 family [Desulfonatronospira thiodismutans ASO3-1] gi|298510396|gb|EFI34299.1| membrane protein insertase, YidC/Oxa1 family [Desulfonatronospira thiodismutans ASO3-1] Length = 598 Score = 293 bits (750), Expect = 4e-77, Method: Composition-based stats. Identities = 126/581 (21%), Positives = 231/581 (39%), Gaps = 59/581 (10%) Query: 21 WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA------------LSMS 68 W + + + P + D + ++ Sbjct: 20 WNLLFPPQTPDREEVREEERLEETVPEERDLAPEPDPREEAEDTWDPHEAQIPGFEPEEG 79 Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 ++++ P + N G + L+ Y D+ ++P+V L++P + + Sbjct: 80 EQIKVDTPLYQATFNSAGGILEHFVLKEYKQDIEPDAPMVDLVTPRSLARG---PMGITW 136 Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN 188 + + + + + + Y + V N Sbjct: 137 NRAPTWIEGEWALNGEDLDLEPGDEKTLTFTGRMGGVKFIREMTFVADTYKIQENLQVVN 196 Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES 248 + Q + P + + S + S + + Sbjct: 197 TTEAQASGEIANILA--GPAFSDSRLNPTRLGYYDQDGLSHE----REGNLSDGISRNTG 250 Query: 249 NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL 308 W GI D Y+ +P+ G +Q S + P S T Sbjct: 251 IQWAGIVDHYFMLTLVPASPD----VQLQAHHGDDLFQISLSKSMYLE-PETSQTMDQIY 305 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + G K+ + E I +GWF +A+P+ ++ +FY N+G+AI+L T Sbjct: 306 YLGPKDREYLEGAPN-----HLEESIYYGWFNLLAQPLMKVLHFFYQYTANYGVAILLLT 360 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +K++F+PL+ K Y S MK +QP + ++REK K + + + +++LYKT+ +NPL Sbjct: 361 LVIKIIFWPLSHKSYKSMNQMKKLQPMMTKIREKHKD-DRKAMNEEIMRLYKTYKVNPLG 419 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIKDLAAADPTNIFTLFGIL 480 GC PIL+QIPVF A+Y+ + S+E+RHAPF W+ DL+A DP Sbjct: 420 GCLPILVQIPVFIALYQGLLGSVELRHAPFISHIPFTDIVWLADLSARDPFY-------- 471 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 I P++M +MF+Q +M+P P D QA I+ ++P+VF+F +FP+GL+I Sbjct: 472 -----------ITPLLMGATMFLQQRMAPAPGDPLQARIMQFLPLVFIFIFITFPSGLVI 520 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 YW +NV+SI QQ +++ + ++ + + + Sbjct: 521 YWLANNVLSIGQQWYMLRSADVPLQKAEQKAAEKAGKSSRD 561 >gi|256830920|ref|YP_003159648.1| 60 kDa inner membrane insertion protein [Desulfomicrobium baculatum DSM 4028] gi|256580096|gb|ACU91232.1| 60 kDa inner membrane insertion protein [Desulfomicrobium baculatum DSM 4028] Length = 534 Score = 293 bits (749), Expect = 6e-77, Method: Composition-based stats. Identities = 142/568 (25%), Positives = 249/568 (43%), Gaps = 45/568 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M+ N +A++LS++++ W + P +E P D + Sbjct: 1 MDSNKRVILAVSLSLLVLLGWNYIFPPAPPLETAPQNLSAPNQTAAPASQDAAQVMPSSP 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 S ++ + P IN G + L+ Y + S + L++ + Sbjct: 61 TVQFIPSKGEKLSVDTPLYRAVINSSGGVLESFELKEYKETIDPGSKNIDLVTAQSVTK- 119 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 A + + + TV + I+L + Y Sbjct: 120 --APMGLIWNSLPTWAQGEWTVQGGDLDLAAGQSGTIQLSGVVGGVQMDRVLTFTGGTYE 177 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 K VTN + Q++ + ++ + + + IA + SL E+ + Sbjct: 178 VKEEVKVTNVTAAQVQGHLAFSVSSVPLTAESDKYNMTK--IAYMAAGSLTEEDSQKDLQ 235 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + + + W GI Y+ +P+ F + A+++ + PG Sbjct: 236 IGVESTAPAQ-WGGIESNYFLLAMVPTSSDMF-----ARAKLEDNVYRMTVADQVLLDPG 289 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + T + G K + KD + + +G+F+ IA+P+ +++ Y VGN Sbjct: 290 ITQLRTVSYYFGPKTEKDLSLMPKD-----LKGSMHYGFFHIIAQPLNQFLNFLYGYVGN 344 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +GIAI++ T+ +KLLF+PL+ K Y S MK +QP + ++REK+ ++ ++QLY Sbjct: 345 YGIAIIILTIIIKLLFWPLSHKSYKSMEQMKKLQPMMAKIREKYADDREKMNS-EIMQLY 403 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIKDLAAADPT 471 KT+ +NP GC P+LLQIPVFFA+Y+ + ++E+RHA F W+ DL+A DP Sbjct: 404 KTYKVNPAGGCVPMLLQIPVFFALYQALLGAIELRHAAFIPTLPFTDLVWLADLSAKDPY 463 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 I P+IM +MF+Q ++SPP D QA I+ +MPV+F F Sbjct: 464 Y-------------------ITPLIMGATMFLQQRLSPPMGDPMQAKIMMFMPVIFTFLF 504 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +FP+GL++YW +NV+SI QQ+ ++K Sbjct: 505 LNFPSGLVVYWLVNNVLSIAQQSYMIKK 532 >gi|145628056|ref|ZP_01783857.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 22.1-21] gi|144979831|gb|EDJ89490.1| putative inner membrane protein translocase component YidC [Haemophilus influenzae 22.1-21] Length = 514 Score = 293 bits (749), Expect = 6e-77, Method: Composition-based stats. Identities = 128/541 (23%), Positives = 230/541 (42%), Gaps = 41/541 (7%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + + +AL I +Q + + + +I S + + D + Sbjct: 1 MDSRRSLLVLALIFISFLVYQQWQLDKNPPVQTEQTTSITATSDVPASSPSNSQAIADSQ 60 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + L+N I+ G L Y ++ S +P L ++ Y Sbjct: 61 ----TRGRIITLENDVFRLKIDTLGGDVISSELLKYDAELDSKTPFELL--KDTKEHIYI 114 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDEH 177 A+ + N I+ + + + + + L+F+ + + Sbjct: 115 AQSGLIG-KNGIDTRSGRAQYQIEGDNFKLAEGQESLSVPLLFEKDGVTYQKIFVLKRGS 173 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y + + N S I P G++ +++ N A + ++ Sbjct: 174 YDLGVDYKIDNQSGQAIEVEPYGQLKHSIVESSGNVAMPTYTGGAYSSSDTNYKKYSFAD 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + Y+ S +IP+++ + + + + +TI Sbjct: 234 MQDNNLSIDTKAGWVAVLQHYFVSAWIPNQDVNNQL-YTITDSKNNVASIGYRGPVVTIP 292 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G T T+ L+ G K + + ++ +D+GW +FIAKP+F L+++ +V Sbjct: 293 SGSQETITSSLWTGPKLQNQMATVANN-----LDLTVDYGWAWFIAKPLFWLLTFIQGIV 347 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+ T+ VK + +PL K QY S A M+ +QPK+ E+RE+F Q + + M++ Sbjct: 348 SNWGLAIICVTIVVKAILYPLTKAQYTSMAKMRILQPKMQEMRERFGD-DRQRMSQEMMK 406 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC PILLQ+P+F A+Y ++E+RHAPF+GWI+DL+A DP Sbjct: 407 LYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFFGWIQDLSAQDPYY----- 461 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I PI+M +SMF+ KMSP P D Q ++N+ F SF Sbjct: 462 --------------ILPILMGISMFLLQKMSPTPVTDPTQQKVMNF--YAISFLC-SFSC 504 Query: 537 G 537 G Sbjct: 505 G 505 >gi|116750023|ref|YP_846710.1| 60 kDa inner membrane insertion protein [Syntrophobacter fumaroxidans MPOB] gi|166977422|sp|A0LLH3|OXAA_SYNFM RecName: Full=Inner membrane protein oxaA gi|116699087|gb|ABK18275.1| protein translocase subunit yidC [Syntrophobacter fumaroxidans MPOB] Length = 553 Score = 293 bits (748), Expect = 7e-77, Method: Composition-based stats. Identities = 141/569 (24%), Positives = 249/569 (43%), Gaps = 29/569 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFY-----VYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 ME +A+ LS++++ W+ ++ P + P V A Sbjct: 1 ME--KRALIALVLSLLVLVFWEMYFGLFRMPAPPPNKTEQAAPTTTQPATPQTVPPQAAT 58 Query: 56 VLIDDRAQALSMSPRVE---LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 + + + +++P +I GA+ L+ + V +SP + +++ Sbjct: 59 PQALPQDHVFRPDQQFQSWAIEDPLYRMNIIAPGARLSSFELKKHRKAVQPDSPPMQMVT 118 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 Y + + +L +L P L F T Sbjct: 119 SQTG--GYLPMAIDLLHHQDWQLSTRPFFSEAGPKTVLEDKKPRVLSFSTEVPGKVRVTK 176 Query: 173 SL---DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 S E YL + + N S +++ + L SL Sbjct: 177 SFTCSPESYLLDLEVQIGNLSSERLVDQMGISFYFLPFSPPEEESSYNPSQLTTLEKGSL 236 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 D+ KS + +W+ + ++ + IP E + + L Q + Sbjct: 237 KNFTTKDLSKSDLVL-KPPMTWVAYENNFFINAIIPVAEGGYQFVPRILDATKGLLQLVY 295 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + + ++ + + G KE T+ E +D+GWF FIAKP+ + Sbjct: 296 LTDPFQLEGNETKSFKLRFYIGPKELSTLARAEHQ-----LASAVDYGWFTFIAKPLVYV 350 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + +FY N+G+AI+L T+ +K+LF+PL +K Y S MK IQPK+ ++REK+K + Sbjct: 351 LDWFYRYTHNWGVAIILLTIVIKILFWPLTQKSYQSMQKMKKIQPKMTQIREKYKGDREK 410 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + ++ LY+T+ +NP+ GC P+LLQIPVFFA+Y++++ ++E+RH PF WI DL A D Sbjct: 411 M-NQELMGLYRTYKVNPMGGCLPMLLQIPVFFALYRMLNGAVELRHEPFMLWIDDLTAPD 469 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 + F +P + + ++M ++MFIQ KM+P D Q I+ MPV+F Sbjct: 470 RL-------PIGFDIPYLGGLPVLTLLMGITMFIQQKMTPSAGDPRQDQIMMIMPVMFTV 522 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +FP+GL++YW +NV+SI QQ + + Sbjct: 523 FFVNFPSGLVLYWLVNNVLSIAQQYWVNR 551 >gi|294627440|ref|ZP_06706024.1| inner membrane protein translocase component YidC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598261|gb|EFF42414.1| inner membrane protein translocase component YidC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 574 Score = 293 bits (748), Expect = 8e-77, Method: Composition-based stats. Identities = 120/593 (20%), Positives = 232/593 (39%), Gaps = 57/593 (9%) Query: 1 MERNWNYFVAIALS--VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M + + + L ++ W + ++ Sbjct: 1 MNQTRVFLIFAWLMVAALLWMEWGKDKAAANAPVAAATQSVPAARDLDAAAPSAANVPAA 60 Query: 59 DDRAQALSMS------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 QA + P V + + L ++ G D L + Sbjct: 61 QSIPQAGAPGTVPATSSTAATPAAAGAAPVVTVTSDVLRLKLD--GRSVLDAELLQFPQT 118 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPIK 157 +P+ L + + Y A + S + + + + T + Sbjct: 119 KDGTAPVSLL--TEDPAHPYNATSGWASERSPVPGVAGFRAEQPGTTFEMAKGQNTLVVP 176 Query: 158 LVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 V+ +++ RT +L Y I D V N S ++ R + Sbjct: 177 FVWNGPDDVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMTNP 236 Query: 217 ----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 G + + + D N + W+ + ++ + +IP K+ Sbjct: 237 DSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ--- 293 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + L+ R A+ T+ PG++ +T L+ G K + E + R Sbjct: 294 ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVS-LIAKEDVKGLDRVVD 352 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY S A M+ Sbjct: 353 YSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRRF 412 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V+ S+E Sbjct: 413 QPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVE 471 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511 +R AP+ GWI+DL A DP I P++ M+ K++P P Sbjct: 472 LRQAPWLGWIQDLTARDPYF-------------------ILPLLNISIMWATQKLTPTPG 512 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 513 MDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 565 >gi|294665120|ref|ZP_06730423.1| inner membrane protein translocase component YidC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605121|gb|EFF48469.1| inner membrane protein translocase component YidC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 574 Score = 292 bits (747), Expect = 1e-76, Method: Composition-based stats. Identities = 124/595 (20%), Positives = 239/595 (40%), Gaps = 61/595 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + + L V + W + + Q+V +D + + Sbjct: 1 MNQTRVFLIFAWLMVAALL-WMEW-GKDKAAANAPVAAATQSVPAARDLDAAPPSAANVP 58 Query: 61 RAQALSMS----------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 AQ++ + P V + + L ++ G D L + Sbjct: 59 AAQSIPQAGAPGTVPATSSTAATPAAAGAAPVVTVTSDVLRLKLD--GRSVLDAELLQFP 116 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTP 155 +P+ L + + Y A + S + + + + T Sbjct: 117 QTKDGTAPVSLL--TEDPAHPYNATSGWASERSPVPGVAGFRAEQPGTTFEMAKGQNTLV 174 Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 + V+ + + RT +L Y I D V N S ++ R + Sbjct: 175 VPFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMT 234 Query: 215 GV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 G + + + D N + W+ + ++ + +IP K+ Sbjct: 235 NPDSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ- 293 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + L+ R A+ T+ PG++ +T L+ G K + E + R Sbjct: 294 --ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVS-LIAKEDVKGLDRV 350 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY S A M+ Sbjct: 351 VDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMR 410 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V+ S Sbjct: 411 RFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVES 469 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+R AP+ GWI+DL A DP I P++ M+ K++P Sbjct: 470 VELRQAPWLGWIQDLTARDPYF-------------------ILPLLNISIMWATQKLTPT 510 Query: 511 P-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 511 PGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 565 >gi|188993861|ref|YP_001905871.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. campestris str. B100] gi|254778172|sp|B0RMM6|OXAA_XANCB RecName: Full=Inner membrane protein oxaA gi|167735621|emb|CAP53839.1| inner membrane insertion protein [Xanthomonas campestris pv. campestris] Length = 575 Score = 292 bits (746), Expect = 1e-76, Method: Composition-based stats. Identities = 124/595 (20%), Positives = 233/595 (39%), Gaps = 60/595 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + + L V + W + + + + AA + Sbjct: 1 MNQTRVFLIFAWLMVAALL-WMEWGKDKAAANAPTPIASQAVPAARDPDAAAPAANVPSA 59 Query: 61 RAQALSMSP----------------------RVELKNPSLIGSINLKGAQFDDLNLRGYH 98 +A + SP + L + L ++ G D L + Sbjct: 60 QAIPQAGSPAAVPGTSTTTATATPVAAGAAPAITLTSDVLRLKLD--GRSVLDAELLQFP 117 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTP 155 P+ L + + Y A + S + + + T Sbjct: 118 QTKDGTEPVKLL--TEDAAHPYNATSGWASERSPVPGVGGFRAEQPGTTFELAKGQNTLV 175 Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 + V+ N + R +L Y I D V N S ++ R + Sbjct: 176 VPFVWNGPNGVSIRRIFTLQRGSYAISIKDEVINKSDAAWNGYVFRKLSRVPTILSRGMT 235 Query: 215 GV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 G + + + D N + W+ + ++ + +IP K+ Sbjct: 236 NPDSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ- 294 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + L+ R A+ T+ PG+S +T L+ G K + E + R Sbjct: 295 --ASLYVLAQDGPRDVAELRGPAFTVAPGQSASTEARLWVGPKLVSLLAK-EDVKGLDRV 351 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + I + +F ++S+ ++ + N+G AI+ + ++L +PL+ QY S A M+ Sbjct: 352 VDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVLLLRLALYPLSAAQYKSGAKMR 411 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 QP++ +L+E++ Q Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V+ S Sbjct: 412 RFQPRLAQLKERYGD-DRQKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVES 470 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+R AP+ GWI+DL A DP I P++ M+ K++P Sbjct: 471 VELRQAPWLGWIQDLTARDPYF-------------------ILPVLNIAIMWATQKLTPT 511 Query: 511 P-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 512 PGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 566 >gi|78050041|ref|YP_366216.1| putative inner membrane protein translocase component YidC [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123583682|sp|Q3BLZ7|OXAA_XANC5 RecName: Full=Inner membrane protein oxaA gi|78038471|emb|CAJ26216.1| preprotein translocase subunit YidC [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 574 Score = 291 bits (745), Expect = 2e-76, Method: Composition-based stats. Identities = 124/594 (20%), Positives = 232/594 (39%), Gaps = 59/594 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF---------------------YVYPRIEEMNNERKN 39 M + + + L V + W + + Sbjct: 1 MNQTRVFLIFAWLMVAALL-WMEWGKDKAAANAPVAAATQAVPAARDPDAAAPSAANVPS 59 Query: 40 IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 Q + Q A A +P V L + L ++ G D L + Sbjct: 60 AQPIPQAGAPGTVPATSSTAATPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELLQFPQ 117 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPI 156 P+ L + + Y A + S + + + + T + Sbjct: 118 TKDGTEPVSLL--TEDPAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFEMAKGQNTLVV 175 Query: 157 KLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 V+ + + RT +L Y I D V N S ++ R + Sbjct: 176 PFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMTN 235 Query: 216 V----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 G + + + D N + W+ + ++ + +IP K+ Sbjct: 236 PDSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ-- 293 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 + L+ R A+ T+ PG++ +T L+ G K + E + R Sbjct: 294 -ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVN-LIAKEDVKGLDRVV 351 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY S A M+ Sbjct: 352 DYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRR 411 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V+ S+ Sbjct: 412 FQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESV 470 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+R AP+ GWI+DL A DP I P++ M+ K++P P Sbjct: 471 ELRQAPWLGWIQDLTARDPYF-------------------ILPLLNISIMWATQKLTPTP 511 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 512 GMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 565 >gi|325926222|ref|ZP_08187580.1| Preprotein translocase subunit YidC [Xanthomonas perforans 91-118] gi|325543404|gb|EGD14829.1| Preprotein translocase subunit YidC [Xanthomonas perforans 91-118] Length = 574 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 124/594 (20%), Positives = 233/594 (39%), Gaps = 59/594 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF---------------------YVYPRIEEMNNERKN 39 M + + + L V + W + + Sbjct: 1 MNQTRVFLIFAWLMVAALL-WMEWGKDKAAANAPVAAATQAVPAARDPDAAAPSAANVPS 59 Query: 40 IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 Q + Q A A +P V L + L ++ G D L + Sbjct: 60 AQPIPQAGAPGTVPATSSTAATPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAELLQFPQ 117 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPI 156 +P+ L + + Y A + S + + + + T + Sbjct: 118 TKDGTAPVSLL--TEDPAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFEMAKGQNTLVV 175 Query: 157 KLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 V+ + + RT +L Y I D V N S ++ R + Sbjct: 176 PFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMTN 235 Query: 216 V----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 G + + + D N + W+ + ++ + +IP K+ Sbjct: 236 PDSFSFNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQ-- 293 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 + L+ R A+ T+ PG++ +T L+ G K + E + R Sbjct: 294 -ASLYVLAQDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVS-LIAKEDVKGLDRVV 351 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + I + +F ++S+ ++ + N+G AI+ V ++L +PL+ QY S A M+ Sbjct: 352 DYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRR 411 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V+ S+ Sbjct: 412 FQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESV 470 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E+R AP+ GWI+DL A DP I P++ M+ K++P P Sbjct: 471 ELRQAPWLGWIQDLTARDPYF-------------------ILPLLNISIMWATQKLTPTP 511 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 D QA ++ +MP+VF ++ PAGL++YW + + ++ Q +++ HG + Sbjct: 512 GMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQHGEKP 565 >gi|206890197|ref|YP_002249042.1| inner membrane protein OxaA [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742135|gb|ACI21192.1| inner membrane protein OxaA [Thermodesulfovibrio yellowstonii DSM 11347] Length = 513 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 136/561 (24%), Positives = 238/561 (42%), Gaps = 60/561 (10%) Query: 6 NYFVAIALSVIIVYA----WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 F+A+ LS+ I++ + +Y +++ E K + P V + Sbjct: 7 RAFLAVILSMAILFGSQYLYTKYYKPSEVQQQPVEVKKEDKKQIPQSVQPEPLKKEEPKQ 66 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 V ++N ++ +GA + L+ Y ++ + L S Sbjct: 67 ISKDIKYREVSIENDVFKVILSNEGATIKSVELKKYK---DNSGKPIILTSSD------- 116 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 L + + + S + +VF ++ +F + + Sbjct: 117 -ILPLSISKDGKFNYSKVMFNIDDSNVSFKNSNQAVVVFTYNDSNIFLKRTFFFNKTDYV 175 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 I + + + + + + K + + + Sbjct: 176 IDIKEEVKGFGSYYVTLGKDFGIFEKEDSPHW--------GPVILKEADRIELNPSKIKE 227 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 + + E W+ DKY+ S +P + + Y D + Sbjct: 228 TNTYKEGVKWIAQEDKYFFSAIVPVTKANQFVVLPYNGDALTGVEFN------------D 275 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 + +FA KE+ + + E ++D+G+F IA+P+F + Y+L+GN+G Sbjct: 276 GINSYRVFAAPKEYDYLKKFNV-----GLEHIVDFGFFSIIARPLFWFLKLLYSLIGNYG 330 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 IAI++ T+ V++ F P+ + S + +QPK+ +L+E++K PQ LQK M++LYK Sbjct: 331 IAIIILTILVRIPFIPIVNRGQKSMQKLSELQPKLMQLKEQYKN-DPQRLQKEMMELYKK 389 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + INP++GC P+LLQIPVFFA+YK+++I++E+R APF WI DL+A DP Sbjct: 390 YKINPMSGCLPMLLQIPVFFALYKILTIAIELRQAPFMFWIHDLSAKDPYY--------- 440 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 + PIIM +M IQ KM+P AD Q I+ +PVVF F SFP+GL++Y Sbjct: 441 ----------VLPIIMGATMLIQQKMTPSTADPTQQKIMLLLPVVFTFLFLSFPSGLVLY 490 Query: 542 WSWSNVISIVQQAVIMKMHGA 562 W +N+ I QQ I K Sbjct: 491 WLINNLFGIAQQFYINKKIKK 511 >gi|317051002|ref|YP_004112118.1| membrane protein insertase, YidC/Oxa1 family [Desulfurispirillum indicum S5] gi|316946086|gb|ADU65562.1| membrane protein insertase, YidC/Oxa1 family [Desulfurispirillum indicum S5] Length = 519 Score = 290 bits (741), Expect = 4e-76, Method: Composition-based stats. Identities = 156/575 (27%), Positives = 247/575 (42%), Gaps = 74/575 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFY----VYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ +AI LS I+++++Q F+ P + + T++ P Q D A Sbjct: 1 MDNK--MVLAIVLSAIVLFSYQIFFIEMDEPPLPVDGAPAKVAEPTLQAPAQNDAVPALP 58 Query: 57 LID------------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 D++ + V L+N +I + + G L L+ + D Sbjct: 59 ATQFSSSPSLDQGLSDQSLRIVDGRDVVLENDLIIATFSTSGGHLQSLRLKEHQED-GRG 117 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 +V ++ + Y A ++T + + Sbjct: 118 GAMVEMI-----RAGYPAFTSVIATPTGNIDLAGLPFTVEQQTD-----NSVTFHTLLPD 167 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + +L Y F I + + + EG + Sbjct: 168 GRDVRKQYTLSGAYEFSIRYDME---CAPGACAAVTTLPVEIVANVKGDTFSFEGIVHGS 224 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 D L + KYSD+ + + G+ DKY+ F+PS + +F G A Sbjct: 225 ADAGLDKIKYSDVSA---VRDIRNIGYGGVMDKYFLIAFLPSPQDTFRLFPDIPQRGAAL 281 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + T+ +FAG K + Y+ ID+G+ +A Sbjct: 282 V--------------SPLGTSVTVFAGPKLKGILDTYDV-----GLSQAIDYGFLSILAA 322 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+ + +FY+L GN+G+AI+L TV +K++FFPL+ K Y S + + P++ +L+EKFK Sbjct: 323 PLMQAIRWFYSLTGNYGVAIILLTVCIKIIFFPLSHKSYKSMKKISVLAPELKKLKEKFK 382 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 PQ L A ++LYKTH NPL+GC PIL+QIPVFFA+YK + ++E+RHAPF WI D Sbjct: 383 N-DPQKLNTATMELYKTHKANPLSGCLPILVQIPVFFALYKTLMNAIELRHAPFALWIND 441 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A DP I P+IM +MF+Q KM+P D Q I+ +P Sbjct: 442 LSALDPYY-------------------ITPVIMGATMFLQQKMTPTAMDPLQRKIMLSLP 482 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +VF F +FP+GLI+YW +NV+SI QQ I K Sbjct: 483 IVFTFLFMTFPSGLILYWIVNNVLSIAQQYYINKR 517 >gi|302035743|ref|YP_003796065.1| inner-membrane protein insertion factor OxaA [Candidatus Nitrospira defluvii] gi|300603807|emb|CBK40139.1| Inner-membrane protein insertion factor OxaA [Candidatus Nitrospira defluvii] Length = 580 Score = 290 bits (741), Expect = 5e-76, Method: Composition-based stats. Identities = 143/591 (24%), Positives = 237/591 (40%), Gaps = 70/591 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY----PRIEEMNNERK----------------NI 40 ME V + +S+ ++ + P E + + Sbjct: 1 ME--KRVIVFLIVSLAVIIGYDYLLKGMGLLPPSEPVQVATNPSPAAETGKPGGGAGDSA 58 Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 ++V + + A S VE+ + +GA L+ Y Sbjct: 59 KSVSAAPVSSVNGVPASPGNATGAASEEQTVEVDTELFRAKFSNRGAVLKSWELKRYSAA 118 Query: 101 VSSNSPIVTLLSPSNTKNAYFAEL---DYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 V +S V L+ + + V++ L + + + Sbjct: 119 VEQSSTPVQLVYSGGRFKGPLSLVTGDQSVTSDLGSALYQVTQDLSHLDSAHPVGHLTFR 178 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 N + + Y+ I +G TN V+ Sbjct: 179 YHDSQKNVDVEKELTFHHGSYVVDIAIRT------------QGLTTPVDVTLGTNFGIVE 226 Query: 218 EG--FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 G FI ++G SLV+ K + W I DKY+ SV +P K ++ + Sbjct: 227 WGEGFIGLMGSASLVDDKVLKETPDGEAERKGDVKWSAIQDKYFLSVLMPQKASA--ALA 284 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD-LAIPRFEMLI 334 K D +F+ P T L+AG KE+ T+ F + Sbjct: 285 KKEGDKLVSAGVRFAT------PVNGATMAMQLYAGPKEYDTLKRLNVGLEDTIDFGWFV 338 Query: 335 D--WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 WG +AKP+F ++ + Y N+G+ I+L T+ +KL+F PL K Y S M+ I Sbjct: 339 FGSWGLVKAVAKPIFYVLRFLYEFTHNYGVTIILLTMLIKLMFVPLQYKSYKSMKQMQVI 398 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ L+ KFK + L K +I+LYK H +NP+ GC P++LQ+PVF A++ ++ ++++ Sbjct: 399 QPKVLALQTKFKD-DRERLNKELIKLYKDHRVNPVGGCLPMVLQMPVFVALFNILYMTID 457 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +R APF WIKDL+ DP + PI+M +M IQ K++P Sbjct: 458 LRQAPFMLWIKDLSVQDPYY-------------------VLPIVMGATMVIQQKITPTTM 498 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D QA I+ ++PV F +FPAGL++YW +N ++I QQ V ++ G + Sbjct: 499 DPTQAKIMLFLPVFMTFLFVNFPAGLVLYWLTNNTLTITQQVVTERLFGKK 549 >gi|327398260|ref|YP_004339129.1| Membrane protein oxaA [Hippea maritima DSM 10411] gi|327180889|gb|AEA33070.1| Membrane protein oxaA [Hippea maritima DSM 10411] Length = 522 Score = 289 bits (740), Expect = 6e-76, Method: Composition-based stats. Identities = 136/568 (23%), Positives = 241/568 (42%), Gaps = 57/568 (10%) Query: 1 MERN--WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N +AI + I++ A+ F++ + N Q A Sbjct: 1 MKENNEKRILMAILVVTILITAYTYFFLPKQQPTPKNSNATKAKQVDHKQQLLQQTAKTT 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + L + ++ + I I+ +L L+ Y + N V L+ S N Sbjct: 61 AKKQTDLKE-KLITVETDNYILKISSLNGSIKELTLKKYSI----NKANVELVKSSGYYN 115 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 + + E + L + L N N + + D Y Sbjct: 116 TLETVFENRQLEDMEENTPYKPNSYRVELSKLNKNFKLILKKSNDNYTIIKTFSFKDGDY 175 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 F V N + ++ + + + + + + Sbjct: 176 AFDFNVRVLKN-----NQPVKAKLSVYAGPDLGDLQKAKYSHLGAVALVDNDKI-----R 225 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 E W+ + KY+ F+P S + + L+DG+ Y Sbjct: 226 TDKKIKPDEDIHWIALESKYFCFAFLPQNSNSLLAGYTKLNDGNYVYV------------ 273 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 ++AG K TI + + + +I +G F FI KP+ ++++ Y++ G Sbjct: 274 NLESPAKLTIYAGPKSKETIAAVDH-----KLDKIIRFGMFGFIGKPLLYVLNWLYSIFG 328 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+AI++ T ++L+F+PL+ K + S M +QPK+ EL+ K+K P Q L KA ++L Sbjct: 329 NYGVAIIVLTFLIRLIFYPLSFKSFKSMKEMAKLQPKLKELQAKYKGKPDQ-LNKATMEL 387 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK H +NP GC P+++QIPVFFA+Y V+ ++E+R APF WI DL++ DP Sbjct: 388 YKKHKVNPFGGCLPVVIQIPVFFALYNVLLNAIELRGAPFMLWITDLSSKDPYY------ 441 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 + PI+M L+M++Q K++P D Q I+ +MP++F F FP+GL Sbjct: 442 -------------VLPILMGLTMYVQQKLTPATGDPTQQKIMMFMPLIFTFMFMGFPSGL 488 Query: 539 IIYWSWSNVISIVQQAV---IMKMHGAE 563 ++YW+ +N+++I QQ + I+K + Sbjct: 489 VLYWATNNLLTIAQQFIDSQILKAQEKK 516 >gi|188579256|ref|YP_001916185.1| putative inner membrane protein translocase component YidC [Xanthomonas oryzae pv. oryzae PXO99A] gi|254778173|sp|B2SUW0|OXAA_XANOP RecName: Full=Inner membrane protein oxaA gi|188523708|gb|ACD61653.1| 60 kDa inner-membrane protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 574 Score = 289 bits (738), Expect = 1e-75, Method: Composition-based stats. Identities = 127/606 (20%), Positives = 241/606 (39%), Gaps = 63/606 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + + L V + W + + Q+V +D + + Sbjct: 1 MNQTRVFLIFAWLMVAALL-WMEW-GKEKAAANAPGAAATQSVPAARDLDAATPSAANVP 58 Query: 61 RAQALSMS----------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 AQA+ + P V L + L ++ G D L + Sbjct: 59 AAQAIPQAGAPGKVPATSTTTATPAAAGTAPVVTLTSDVLRLKLD--GRSVLDAELLQFP 116 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTP 155 +P+ L + + Y A + S + + + T Sbjct: 117 QTKDGTAPVSLL--TEDAAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFELAKGQNTLV 174 Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 + V+ N + RT +L Y I D V N S ++ R + Sbjct: 175 VPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNGYVFRKLSRVPTILSRGMT 234 Query: 215 GV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 G + + D N + W+ + ++ + +IP + Sbjct: 235 NPDSFSFNGATWYSPQAGYERRAFKDYMDDGGLNRQITGGWIALLQHHFFTAWIPQNDQ- 293 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + L+ R A+ T+ PG++ TT L+ G K + E + R Sbjct: 294 --ASLYVLNKDGPRDVAELRGPAFTVAPGQTATTEARLWVGPKLVS-LIAKEDVKGLDRV 350 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + I + +F ++S+ ++ + N+G AI+ V ++L+ +PL+ QY S+A M+ Sbjct: 351 IDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLVVLLRLVLYPLSSAQYKSSAKMR 410 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V+ S Sbjct: 411 KFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVES 469 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+R AP+ GWI+DL A DP I P + M+ K++P Sbjct: 470 VELRQAPWLGWIQDLTARDPHF-------------------ILPALNIAIMWATQKLTPT 510 Query: 511 PA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D QA ++ +MP+VF ++ P+GL++YW + ++++ Q +++ HG + Sbjct: 511 PGIDPMQAKMMQFMPLVFGAMMAFVPSGLVLYWVVNGGLNLLIQWWMIRQHGEKPS--KI 568 Query: 570 LRSTFS 575 +R+ Sbjct: 569 IRANAK 574 >gi|58584259|ref|YP_203275.1| putative inner membrane protein translocase component YidC [Xanthomonas oryzae pv. oryzae KACC10331] gi|166714253|ref|ZP_02245460.1| putative inner membrane protein translocase component YidC [Xanthomonas oryzae pv. oryzicola BLS256] gi|75508023|sp|Q5GTT3|OXAA_XANOR RecName: Full=Inner membrane protein oxaA gi|58428853|gb|AAW77890.1| 60 kDa inner-membrane protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 574 Score = 289 bits (738), Expect = 1e-75, Method: Composition-based stats. Identities = 127/606 (20%), Positives = 241/606 (39%), Gaps = 63/606 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + + L V + W + + Q+V +D + + Sbjct: 1 MNQTRVFLIFAWLMVAALL-WMEW-GKEKAAANAPVAAATQSVPAARDLDAATPSAANVP 58 Query: 61 RAQALSMS----------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYH 98 AQA+ + P V L + L ++ G D L + Sbjct: 59 AAQAIPQAGAPGKVPATSTTTATPAAAGTAPVVTLTSDVLRLKLD--GRSVLDAELLQFP 116 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILTPTTP 155 +P+ L + + Y A + S + + + T Sbjct: 117 QTKDGTAPVSLL--TEDAAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFELAKGQNTLV 174 Query: 156 IKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTF 214 + V+ N + RT +L Y I D V N S ++ R + Sbjct: 175 VPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNGYVFRKLSRVPTILSRGMT 234 Query: 215 GV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 G + + D N + W+ + ++ + +IP + Sbjct: 235 NPDSFSFNGATWYSPQAGYERRAFKDYMDDGGLNRQITGGWIALLQHHFFTAWIPQNDQ- 293 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + L+ R A+ T+ PG++ TT L+ G K + E + R Sbjct: 294 --ASLYVLNKDGPRDVAELRGPAFTVAPGQTATTEARLWVGPKLVS-LIAKEDVKGLDRV 350 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + I + +F ++S+ ++ + N+G AI+ V ++L+ +PL+ QY S+A M+ Sbjct: 351 IDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLVVLLRLVLYPLSSAQYKSSAKMR 410 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V+ S Sbjct: 411 KFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVES 469 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+R AP+ GWI+DL A DP I P + M+ K++P Sbjct: 470 VELRQAPWLGWIQDLTARDPHF-------------------ILPALNIAIMWATQKLTPT 510 Query: 511 PA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P D QA ++ +MP+VF ++ P+GL++YW + ++++ Q +++ HG + Sbjct: 511 PGIDPMQAKMMQFMPLVFGAMMAFVPSGLVLYWVVNGGLNLLIQWWMIRQHGEKPS--KI 568 Query: 570 LRSTFS 575 +R+ Sbjct: 569 IRANAK 574 >gi|94676570|ref|YP_588605.1| putative inner membrane protein translocase component YidC [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219720|gb|ABF13879.1| inner membrane protein oxaA [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 533 Score = 289 bits (738), Expect = 1e-75, Method: Composition-based stats. Identities = 137/575 (23%), Positives = 240/575 (41%), Gaps = 52/575 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + W+ + + P Q Y Sbjct: 1 MDSQRNLLV-IALLFVSYIIWEIWQKEHFPQNNIQNTLIEIKDNLPQQNIPYY------- 52 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +K + +IN G + L Y + S+ P L Y Sbjct: 53 -----KKGKHIIVKTDVFLLTINTSGGDIEQAYLLTYPTKLGSSKPFSLL--EKKPTFVY 105 Query: 121 FAELDYVSTANNIELPNSNTVWNLISG--KILTPTTPIKLVFKNANNILFERTISLD-EH 177 A+ + + + L + + N I++ +T Sbjct: 106 LAQSGIIGKHGIDQKERPLYKAKHKQYFLNNNENILYVPLTYTSTNGIVYTKTFVFKRGE 165 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA------TNTFGVQEGFIAVLGDKSLVE 231 + + + NNS + G+ + + + A K + Sbjct: 166 FAINVNYNIQNNSNKPLEIKLFGQFKQSFNSSEFSDIYRNSFSLQTYRGAAYSTTKYKYK 225 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + + + N W+ + +Y+ + ++P + + L +G F + Sbjct: 226 KYSFKDIQQTNLNVSSKKGWIAMLQQYFVTAWVPITQGYKNFYTTNLENGE--VAIGFQS 283 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 E+ I P K L+ G K + + P ++ +D+G +FI+KP+F L+ Sbjct: 284 EEVNIAPHKQDNLNAILWLGPKIQDKMAEID-----PYLDLAVDYGLLWFISKPLFKLLK 338 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + Y+++GN+G AI++ T V+ L +PL K QY S A M +QPK+ +RE+F +P Q Sbjct: 339 FIYSIIGNWGFAIIIITFIVRGLMYPLTKAQYTSIAKMMILQPKLAVIRERFSDNP-QRQ 397 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + ++ LYK INPL GC P+++Q+P+F A+Y ++S S+E+RHAPF WI+DL+A DP Sbjct: 398 NQELMALYKAEKINPLGGCLPLIIQMPIFLALYYMLSGSIELRHAPFALWIQDLSAQDPY 457 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 I PIIM ++M I K+SP D Q I+N+MP++F Sbjct: 458 Y-------------------ILPIIMGITMLIIQKISPTTITDPIQQKIMNFMPIIFTVF 498 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 FP+GL++Y+ SN+ +I+QQ +I + ++ Sbjct: 499 FLWFPSGLVLYYIVSNLFTIIQQELIYREFKKQVK 533 >gi|71891805|ref|YP_277534.1| hypothetical protein BPEN_012 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795911|gb|AAZ40662.1| putative protein [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 638 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 142/574 (24%), Positives = 260/574 (45%), Gaps = 54/574 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N+FV L + + WQ + + ++R NIQ + + D Sbjct: 89 MDSQRNFFVIAFLIMSFIL-WQIW------QTEYHQRTNIQKINIHENTYPLIRSEDNDA 141 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + +K L+ IN G ++ L Y ++ S P L ++ Y Sbjct: 142 IKYVHHTNHVITVKTDVLLLKINTYGGDIEEAYLVNYLENLHSKEPFHLL--STSQAFTY 199 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGK------ILTPTTPIKLVFKNANNILFERTISL 174 ++ N ++ + K + L ++ I + + Sbjct: 200 QTNSGLITENIPGRSYNKKFIYTTATDKSLYIIPKNENKLQLTLTHYASDGITYTKNYIF 259 Query: 175 DEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN---------TFGVQEGFIAVL 224 + + TV N S ++ G I++ + ++ G Sbjct: 260 HRNDYSIYVFYTVNNMSTYPLKIKLFGNIVQSEHYPKSHNNSDNGDNFPLYSYRGSAYST 319 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 K + + DI+ ++ + S W+ +S KY+A+ +IP + + Y ++ A Sbjct: 320 DKKKYQKYSFKDIKNMNLK-INTSKGWIAMSQKYFATAWIPLTQGNNTFYTTYHNNNSA- 377 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 F +N I + G++ T + L+ G K + P ++L+D+GW +FI++ Sbjct: 378 -SIGFQSNSIDLPIGETGTFQSILWIGPKIQEKMKAIA-----PNLDLLVDYGWLWFISQ 431 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L+S+ Y+ + N+GI+I++ T+ ++L+ +PL K QY S A ++ +QPK+ ++E++K Sbjct: 432 PLFKLLSFIYSYIENWGISIIIITLIIRLIMYPLTKAQYTSMAKIRMLQPKLSIIQEEYK 491 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + I+LYK +NPL GC P+L+Q+P+F A+Y ++S S+E+RHA F WI D Sbjct: 492 HDKYQ-YHQKTIELYKLEKVNPLGGCLPLLIQMPIFLALYYMLSGSVELRHAAFAFWIHD 550 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+A DP I PI+M ++MF KMSP D Q ++ M Sbjct: 551 LSAQDPYY-------------------ILPILMGITMFFIQKMSPTTITDAIQKKMMTIM 591 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++F FP+GL++Y+ SN+I+I+QQ +I Sbjct: 592 LIIFTIFFLWFPSGLVLYYIASNIITIIQQYMIY 625 >gi|84626027|ref|YP_453399.1| putative inner membrane protein translocase component YidC [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|123520412|sp|Q2NX52|OXAA_XANOM RecName: Full=Inner membrane protein oxaA gi|84369967|dbj|BAE71125.1| 60 kDa inner-membrane protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 578 Score = 283 bits (723), Expect = 7e-74, Method: Composition-based stats. Identities = 126/610 (20%), Positives = 241/610 (39%), Gaps = 67/610 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + + + L V + W + + Q+V +D + + Sbjct: 1 MNQTRVFLIFAWLMVAALL-WMEW-GKEKAAANAPGAAATQSVPAARDLDAATPSAANVP 58 Query: 61 RAQALSMS--------------------------PRVELKNPSLIGSINLKGAQFDDLNL 94 AQ ++ + P V L + L ++ G D L Sbjct: 59 AAQPIAQAGAPGTVPATSTTTATATATPAAAGAAPVVTLTSDVLRLKLD--GRSVLDAEL 116 Query: 95 RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG---KILT 151 + +P+ L + + Y A + S + + + Sbjct: 117 LQFPQTKDGTAPVSLL--TEDAAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFELAKGQ 174 Query: 152 PTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210 T + V+ N + RT +L Y I D V N S ++ R + Sbjct: 175 NTLVVPFVWNGPNGVSIRRTFTLERGRYAISIKDEVINKSAAPWNGYVFRKLSRVPTILS 234 Query: 211 TNTFGV----QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 G + + D N + W+ + ++ + +IP Sbjct: 235 RGMTNPDSFSFNGATWYSPQAGYERRAFKDYMDDGGLNRQITGGWIALLQHHFFTAWIPQ 294 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + L+ R A+ T+ PG++ TT L+ G K + E Sbjct: 295 NDQ---ASLYVLNKDGPRDVAELRGPAFTVAPGQTATTEARLWVGPKLVS-LIAKEDVKG 350 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 + R + I + +F ++S+ ++ + N+G AI+ V ++L+ +PL+ QY S+ Sbjct: 351 LDRVIDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIVGLVVLLRLVLYPLSSAQYKSS 410 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ QP++ +L+E++ + Q+A ++L+K INP+ GC P+L+Q+P+FFA+Y V Sbjct: 411 AKMRKFQPRLAQLKERYGDDRVK-YQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWV 469 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + S+E+R AP+ GWI+DL A DP I P + M+ K Sbjct: 470 LVESVELRQAPWLGWIQDLTARDPHF-------------------ILPALNIAIMWATQK 510 Query: 507 MSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 ++P P D QA ++ +MP+VF ++ P+GL++YW + ++++ Q +++ HG + Sbjct: 511 LTPTPGIDPMQAKMMQFMPLVFGAMMAFVPSGLVLYWVVNGGLNLLIQWWMIRQHGEKPS 570 Query: 566 LIDRLRSTFS 575 +R+ Sbjct: 571 --KIIRANAK 578 >gi|167717468|ref|ZP_02400704.1| putative inner membrane protein translocase component YidC [Burkholderia pseudomallei DM98] Length = 454 Score = 282 bits (721), Expect = 9e-74, Method: Composition-based stats. Identities = 135/472 (28%), Positives = 211/472 (44%), Gaps = 41/472 (8%) Query: 100 DVSSNSPIVTL---LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 + + L L + Y A + + PN N V+ ++G Sbjct: 5 TKAGDGKQPDLSVTLFDHTANHTYLARTGLL----GGDFPNHNDVYAQVAGPTSLAADQN 60 Query: 157 KLVFKN-----ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 L + + Y+ + + N + S ++R T Sbjct: 61 TLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVET 120 Query: 212 NTF-GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE-SNSWLGISDKYWASVFIPSKET 269 F G K + + DI+K+ N W+ + Y+AS +IP Sbjct: 121 PMFSHTFLGPAVYTDQKHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGA 180 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 Y+ I PG+S + LFAG +E + P Sbjct: 181 --KRDIYVEKIDPTLYRVGVKQPVAAIAPGQSADVSARLFAGPEEERMLEGIA-----PG 233 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E++ D+GW IAKP+F L+ + VGN+G AI+L T+ +K +FFPL+ Y S A M Sbjct: 234 LELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARM 293 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K I P++ LRE+F +S PQ + A+++LYKT +NP GC P+++QIPVF ++Y V+ Sbjct: 294 KEITPRMQALRERF-KSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLA 352 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S+EMR AP+ WI DL+ DP I P++M++SMF+Q K++P Sbjct: 353 SVEMRGAPWVLWIHDLSQRDPYF-------------------ILPVLMAVSMFVQTKLNP 393 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 P D QA ++ +MP+ F FPAGL++Y+ +NV+SI QQ I + G Sbjct: 394 TPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLG 445 >gi|319760162|ref|YP_004124100.1| inner membrane protein [Candidatus Blochmannia vafer str. BVAF] gi|318038876|gb|ADV33426.1| inner membrane protein [Candidatus Blochmannia vafer str. BVAF] Length = 650 Score = 281 bits (719), Expect = 2e-73, Method: Composition-based stats. Identities = 147/585 (25%), Positives = 266/585 (45%), Gaps = 47/585 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV--YPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N+F+ I L + + WQ + + Y + +NN + N +++ +S I Sbjct: 89 MDSQRNFFIGIFLIISFIL-WQTWEIEHYYQKTHLNNLKDNYTNSYLNSKISSSTPPNNI 147 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + ++ + IN G +D L Y +++S P+ L S + Sbjct: 148 QKNIVHSENKDIITVQTDVFLLKINKYGGNIEDAYLLKYLDNLNSQQPLRLLNSSKKYQY 207 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKI------LTPTTPIKLVFKNANNILFERTI 172 ++EL + +N E ++ I+ + T L+ + N I++ + Sbjct: 208 QTYSELTTNTNLSNEENQCKKFLYTDINNQNKYILKNNKNTLQFTLMHYDPNGIIYTKQY 267 Query: 173 SLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH---------KPQTATNTFGVQEGFIA 222 +Y I T+ N SI I G +++ + EG Sbjct: 268 LFHRNNYFITINHTIDNTSIHSIYTRILGNLVQSQYYLPIPLKNNKNKIYLSSEYEGSAY 327 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + ++D++ ++++ H W+ + KY+ ++P + Y+ D Sbjct: 328 STNKEKYQKYSFNDMKHNNLN-IHSIGGWVALLQKYFVVAWLPITPVNNVFHTTYIDD-- 384 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 F ++ I I PG+ L+ G K I K P ++ID+GWF+FI Sbjct: 385 HYMSIGFQSDLIQIPPGQKKEFQTILWIGPKIQDHI----KSTIAPNLNLVIDYGWFWFI 440 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 ++P+F L+ +N + N+G++I+L T+ ++++ +PL K QY S A M+ +QPK+ ++EK Sbjct: 441 SQPLFKLLQLIHNYINNWGVSIILITIIIRIIMYPLTKAQYTSMAKMRMLQPKLVLIQEK 500 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +K + Q + I+LYK +NPL GC P+L+Q+P+F A+Y ++S S+E+RHA F WI Sbjct: 501 YKHNKYQ-CHQKTIELYKKEKVNPLGGCLPLLIQMPIFLALYYMLSNSVELRHAKFMLWI 559 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILN 521 DL+ DP I PIIM ++M + K++P D Q I+ Sbjct: 560 NDLSTQDPYY-------------------ILPIIMGITMLLIQKLAPTTITDPTQKKIMT 600 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 M F FP+GL++Y+ SNVI+I+QQ +I + + Sbjct: 601 IMLTAFTVFFLWFPSGLVLYYIISNVITIIQQHIIYHGLSKKNNM 645 >gi|1369897|dbj|BAA12844.1| inner membrane protein [Buchnera aphidicola] gi|2827010|gb|AAC38102.1| 60-kDa protein [Buchnera aphidicola] Length = 536 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 124/571 (21%), Positives = 237/571 (41%), Gaps = 60/571 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N+F+ L + WQ + + NE N Sbjct: 1 MELQRNFFIFAFL-FVSFLLWQAWQSQSLKKNKKNEETNS-----------------FFH 42 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ++ +KN L IN+ G ++ +L Y ++S + L + + Y Sbjct: 43 LNHKKEDKNQIIIKNDVLRLVINMYGGDIEEASLLDYKTQLNSPENLKLL--ETKSDFVY 100 Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFK-----NANNILFERTISL 174 A+ + + + +++ +L + I Sbjct: 101 QAQSGLIGKDGLDNSINKIRPLYSAKKNFFELGHNEKELRVPITFIAKNGITYIKNFILK 160 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227 Y ++ + N S ++ + G++ + + G D Sbjct: 161 PGKYNVEVEYDINNLSNKKLELNIFGQLKQTVKLPKNRDIYSGNFALQTFRGAAYSSSDA 220 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE-TSFHSQFKYLSDGHARYQ 286 + K+ +I + + W+ + +Y+ ++P +S + + D Sbjct: 221 KYEKYKFDNIANHEHLHIITHHGWIAMLQQYFVVAWVPDTNISSSNIIYTSYLDNDGIAI 280 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + ++ I I + L+ G ++ + P ++ +D+G+ +F+++P+ Sbjct: 281 IGYKSSLINIPSNSRYIIKSKLWIGPEKQQEMALVA-----PNLDLTVDYGFLWFLSQPL 335 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+S +N +GN+G +I+L T +K + +P+ K QY S + M+ +QPKI+EL+ K Sbjct: 336 FKLLSTIHNFIGNWGFSIILITFMMKAITYPVTKAQYTSMSKMRELQPKINELK-KNFGH 394 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + K ++ LYK INPL GC P+ +Q+P+F ++Y ++ S+E+RHAPF WIKDL+ Sbjct: 395 DKQRMSKEIMALYKKEKINPLGGCLPVFIQMPIFLSLYYMLIGSVELRHAPFLFWIKDLS 454 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 DP + PI M L+MF + S +D Q I+++MP Sbjct: 455 DQDPYY-------------------VLPIFMGLTMFFIQRTSSNNISDPFQQKIMHFMPF 495 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F FP+GL++Y+ SN+++I+QQ I Sbjct: 496 IFTVFFLWFPSGLVLYYIVSNLVTIIQQKYI 526 >gi|22654213|sp|P29431|OXAA_BUCAP RecName: Full=Membrane protein oxaA Length = 536 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 125/571 (21%), Positives = 237/571 (41%), Gaps = 60/571 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N+F+ L + WQ + + NE N Sbjct: 1 MELQRNFFIFAFL-FVSFLLWQAWQSQSLKKNKKNEETNS-----------------FFH 42 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ++ +KN L IN+ G ++ +L Y ++S + L + + Y Sbjct: 43 LNHKKEDKNQIIIKNDVLRLVINMYGGDIEEASLLDYKTQLNSPENLKLL--ETKSDFVY 100 Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFK-----NANNILFERTISL 174 A+ + + + +++ +L + I Sbjct: 101 QAQSGLIGKDGLDNSINKIRPLYSAKKNFFELGHNEKELRVPITFIAKNGITYIKNFILK 160 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227 Y ++ + N S ++ + G++ + + G D Sbjct: 161 PGKYNVEVEYDINNLSNKKLELNIFGQLKQTVKLPKNRDIYSGNFALQTFRGAAYSSSDA 220 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE-TSFHSQFKYLSDGHARYQ 286 + K+ +I + + W+ + +Y+ ++P +S + + D Sbjct: 221 KYEKYKFDNIANHEHLHIITHHGWIAMLQQYFVVAWVPDTNISSSNIIYTSYLDNDGIAI 280 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + ++ I I + L+ G ++ + P ++ +D+G+ +F+++P+ Sbjct: 281 IGYKSSLINIPSNSRYIIKSKLWIGPEKQQEMALVA-----PNLDLTVDYGFLWFLSQPL 335 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+S +N +GN+G +I+L T +K + +PL K QY S + M+ +QPKI+EL+ K Sbjct: 336 FKLLSTIHNFIGNWGFSIILITFMMKAITYPLTKAQYTSMSKMRELQPKINELK-KNFGH 394 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + K ++ LYK INPL GC P+ +Q+P+F ++Y ++ S+E+RHAPF WIKDL+ Sbjct: 395 DKQRMSKEIMALYKKEKINPLGGCLPVFIQMPIFLSLYYMLIGSVELRHAPFLFWIKDLS 454 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 DP + PI M L+MF + S +D Q I+++MP Sbjct: 455 DQDPYY-------------------VLPIFMGLTMFFIQRTSSNNISDPFQQKIMHFMPF 495 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F FP+GL++Y+ SN+++I+QQ I Sbjct: 496 IFTVFFLWFPSGLVLYYIVSNLVTIIQQKYI 526 >gi|328952575|ref|YP_004369909.1| Membrane protein oxaA [Desulfobacca acetoxidans DSM 11109] gi|328452899|gb|AEB08728.1| Membrane protein oxaA [Desulfobacca acetoxidans DSM 11109] Length = 566 Score = 281 bits (717), Expect = 3e-73, Method: Composition-based stats. Identities = 130/601 (21%), Positives = 224/601 (37%), Gaps = 75/601 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV--YPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME +A+ +S +I + YP + + Q V+QP + + + Sbjct: 1 ME--KRALLALVISFVIFIGFGYIQQKFYPPSPQKPATQPVEQPVEQPAAPKPAISPSPV 58 Query: 59 DDRAQA------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY--------------- 97 + + + + P +GA+ L+ Y Sbjct: 59 ATPTTPSTPPTGVQKARDIVVDTPLYQAIFTEQGARLKSFRLKKYWGHLPFQKIADFNLW 118 Query: 98 ---------HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK 148 + + L+ + A A+ IS Sbjct: 119 FFGIDIQRYKRVGNQITDPKELVQATTPDALPLALAWETKAASVGAAEVYQADQKAISLT 178 Query: 149 ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208 + L + Y + TV N S + + + + Sbjct: 179 DQDKAKLSFTCVRPNGLTLVKTFTFEQNSYRLDLTATVKNQSSNPLEGDLALSLTDDFSE 238 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 F + S W + Y+ +P Sbjct: 239 VKDAGFTGFAWSA-------KKSRDTVASGSLKESKMIGQLDWGSLESSYFMMAVVPP-P 290 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + F A F ++ PG+ I+ L+ G K+ + Sbjct: 291 SDFKFTATVQDVASKIMTATFRTQVASLPPGQEISLPYTLYFGPKDLDILKSLGL----- 345 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 E +D+GWF +A P+ ++ +F+ + N+G AI++ T +++LF K Y S + Sbjct: 346 GLEQTVDFGWFQILALPLLYVLQFFFKYLHNYGWAIIVMTFLIRVLFLYPNHKSYQSMKD 405 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QPKI +LREK+K + L K ++ LY+T+ +NP+ GC P++LQ+PVF A+Y ++ Sbjct: 406 MQKLQPKIAKLREKYKD-DREALNKELMGLYRTYKVNPMGGCLPMILQLPVFIALYNILG 464 Query: 449 ISLEMRHAPFW--------GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 ++E+RHAPF W+ DL+A DP + I PIIM + Sbjct: 465 YAIELRHAPFISTLPFTDIVWLADLSAKDP-------------------LLITPIIMGAT 505 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 MFIQ KM+P P D QA ++ MP++F F +F +GL++YW +NV+SI+QQ K Sbjct: 506 MFIQQKMTPSPGDPTQAKLMLMMPIIFTFMFLNFASGLVLYWLLNNVLSIIQQYYTNKYM 565 Query: 561 G 561 Sbjct: 566 P 566 >gi|15839369|ref|NP_300057.1| putative inner membrane protein translocase component YidC [Xylella fastidiosa 9a5c] gi|38503220|sp|Q9P9U1|OXAA_XYLFA RecName: Full=Inner membrane protein oxaA gi|9108026|gb|AAF85565.1|AE004083_4 60kDa inner-membrane protein [Xylella fastidiosa 9a5c] Length = 565 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 123/593 (20%), Positives = 231/593 (38%), Gaps = 50/593 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-------PNQVDNSY 53 M + + L+V + W ++ + +N+ P + Sbjct: 1 MNQTRVLLIFSWLTVATLL-WMDWGKNKNETLEISASQNLGVDSNLELEHAVPQINAGAV 59 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 P + +K L ++ G +L + + + LL+ Sbjct: 60 PVQKDSQLIAVAPKVPVINVKTDVLQLKLD--GFSVLAADLLRFPQSKDRGAKPIKLLTD 117 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFE 169 Y A +VS +N+ S + +LV + AN + Sbjct: 118 DPNY-PYSATTGWVSQSNSPVPNLSTFLPEQPGVSYKLANDQDRLVVPFVWTAANGVSIR 176 Query: 170 RTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV------QEGFIA 222 RT + Y I D + N ++ R N G + Sbjct: 177 RTFTFERGRYAILIRDEIRNGGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFSFNGAVW 236 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + D N W+ + ++ + +IP K+ + L+ Sbjct: 237 YSEKGGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQ---ASLYLLAQNG 293 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 +R A+ T+ PG+S TT L+ G K I + R + I Sbjct: 294 SRDIAELRGPAFTVAPGQSTTTEARLWVGPKLVEQITKEHVK-GLDRVVDYSRFQLMALI 352 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 + +F ++S+ +L+ N+G AI+ V +++ +PL+ QY S A M+ QP++ +L+E+ Sbjct: 353 GQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSAAQYKSAAKMRKFQPRLQQLKER 412 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q Q+AM++LYK INP+ GC+PIL+Q+P+FFA+Y V+ S+E+R AP+ GWI Sbjct: 413 Y-GEDRQKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWLGWI 471 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMIL 520 +DL DP I P++ + M+ K++P P D ++ Sbjct: 472 QDLTTRDPYF-------------------ILPLLNIVIMWATQKLTPTPAGMDPIAGKMM 512 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA--EIGLIDRLR 571 MP++F ++ P+GL +YW + ++++ Q +++ H ++ Sbjct: 513 QVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIRQHADFSRKRSRGNIK 565 >gi|21672310|ref|NP_660377.1| inner membrane protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|21622909|gb|AAM67588.1| inner membrane protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 537 Score = 280 bits (716), Expect = 4e-73, Method: Composition-based stats. Identities = 125/571 (21%), Positives = 237/571 (41%), Gaps = 60/571 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N+F+ L + WQ + + NE N Sbjct: 2 MELQRNFFIFAFL-FVSFLLWQAWQSQSLKKNKKNEETNS-----------------FFH 43 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ++ +KN L IN+ G ++ +L Y ++S + L + + Y Sbjct: 44 LNHKKEDKNQIIIKNDVLRLVINMYGGDIEEASLLDYKTQLNSPENLKLL--ETKSDFVY 101 Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFK-----NANNILFERTISL 174 A+ + + + +++ +L + I Sbjct: 102 QAQSGLIGKDGLDNSINKIRPLYSAKKNFFELGHNEKELRVPITFIAKNGITYIKNFILK 161 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227 Y ++ + N S ++ + G++ + + G D Sbjct: 162 PGKYNVEVEYDINNLSNKKLELNIFGQLKQTVKLPKNRDIYSGNFALQTFRGAAYSSSDA 221 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE-TSFHSQFKYLSDGHARYQ 286 + K+ +I + + W+ + +Y+ ++P +S + + D Sbjct: 222 KYEKYKFDNIANHEHLHIITHHGWIAMLQQYFVVAWVPDTNISSSNIIYTSYLDNDGIAI 281 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + ++ I I + L+ G ++ + P ++ +D+G+ +F+++P+ Sbjct: 282 IGYKSSLINIPSNSRYIIKSKLWIGPEKQQEMALVA-----PNLDLTVDYGFLWFLSQPL 336 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F L+S +N +GN+G +I+L T +K + +PL K QY S + M+ +QPKI+EL+ K Sbjct: 337 FKLLSTIHNFIGNWGFSIILITFMMKAITYPLTKAQYTSMSKMRELQPKINELK-KNFGH 395 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 Q + K ++ LYK INPL GC P+ +Q+P+F ++Y ++ S+E+RHAPF WIKDL+ Sbjct: 396 DKQRMSKEIMALYKKEKINPLGGCLPVFIQMPIFLSLYYMLIGSVELRHAPFLFWIKDLS 455 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 DP + PI M L+MF + S +D Q I+++MP Sbjct: 456 DQDPYY-------------------VLPIFMGLTMFFIQRTSSNNISDPFQQKIMHFMPF 496 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F FP+GL++Y+ SN+++I+QQ I Sbjct: 497 IFTVFFLWFPSGLVLYYIVSNLVTIIQQKYI 527 >gi|71901965|ref|ZP_00684016.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1] gi|71728270|gb|EAO30450.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1] Length = 565 Score = 279 bits (714), Expect = 6e-73, Method: Composition-based stats. Identities = 123/593 (20%), Positives = 232/593 (39%), Gaps = 50/593 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-------PNQVDNSY 53 M + + L+V + W ++ + N+ P + Sbjct: 1 MNQTRVLLIFSWLTVATLL-WMDWGKNKNETLEISASHNLGVDSNLELEHAVPQINAGAV 59 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A P + + L ++ G +L + + + LL+ Sbjct: 60 PLQKDSQLIAAAPKVPVINVTTDVLQLKLD--GFSILAADLLRFPQSKDRGAKPIKLLTD 117 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFE 169 Y A +VS +N+ S + +LV + AN + Sbjct: 118 DPNY-PYSATTGWVSQSNSPVPNLSTFLPEQPDVSYKLANDQNRLVVPFVWTAANGVSIR 176 Query: 170 RTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV------QEGFIA 222 RT + Y I D + N+ ++ R N G + Sbjct: 177 RTFTFERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFSFNGAVW 236 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + D N W+ + ++ + +IP K+ + L+ Sbjct: 237 YSEKGGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQ---ASLYLLAQNG 293 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 +R A+ T+ PG+S TT L+ G K I + R + I Sbjct: 294 SRDIAELRGPAFTVAPGQSTTTEARLWVGPKLVEQITKEHVK-GLDRVVDYSRFQLMALI 352 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 + +F ++S+ +L+ N+G AI+ V +++ +PL+ QY S A M+ QP++ +L+E+ Sbjct: 353 GQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSAAQYKSAAKMRKFQPRLQQLKER 412 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q Q+AM++LYK INP+ GC+PIL+Q+P+FFA+Y V+ S+E+R AP+ GWI Sbjct: 413 Y-GEDRQKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWLGWI 471 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMIL 520 +DL DP I P++ + M+ K++P P D ++ Sbjct: 472 QDLTTRDPYF-------------------ILPLLNIVIMWATQKLTPTPAGMDPIAGKMM 512 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA--EIGLIDRLR 571 MP++F ++ P+GL +YW + ++++ Q +++ H + ++ Sbjct: 513 QVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIRQHADFSRKRSRENIK 565 >gi|28199977|ref|NP_780291.1| putative inner membrane protein translocase component YidC [Xylella fastidiosa Temecula1] gi|182682731|ref|YP_001830891.1| putative inner membrane protein translocase component YidC [Xylella fastidiosa M23] gi|38502965|sp|Q879S3|OXAA_XYLFT RecName: Full=Inner membrane protein oxaA gi|254778174|sp|B2IAR7|OXAA_XYLF2 RecName: Full=Inner membrane protein oxaA gi|28058108|gb|AAO29940.1| 60 kDa inner-membrane protein [Xylella fastidiosa Temecula1] gi|182632841|gb|ACB93617.1| 60 kDa inner membrane insertion protein [Xylella fastidiosa M23] Length = 565 Score = 279 bits (714), Expect = 7e-73, Method: Composition-based stats. Identities = 121/593 (20%), Positives = 232/593 (39%), Gaps = 50/593 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-------PNQVDNSY 53 M + + L+V + W ++ + N+ P + Sbjct: 1 MNQTRVLLIFSWLTVATLL-WMDWSKNKNETLEISASHNLGVDSNLELEHAVPQIHAGAV 59 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A P + + L ++ G +L + + + LL+ Sbjct: 60 PLQKDSQLIAAAPKVPVINVTTDVLQLKLD--GFSILAADLLRFPQSKDRGAKPIKLLTD 117 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL----VFKNANNILFE 169 Y A +VS +N+ S + +L ++ AN + Sbjct: 118 DPNY-PYSATTGWVSQSNSPVPNLSTFLPEQPDVSYKLANDQNRLVVPFIWTAANGVSIR 176 Query: 170 RTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV------QEGFIA 222 RT + Y I D + N+ ++ R N G + Sbjct: 177 RTFTFERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFSFNGAVW 236 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + D N W+ + ++ + +IP K+ + L+ Sbjct: 237 YSEKGGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQ---ASLYLLAQNG 293 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 +R A+ T+ PG++ TT L+ G K I + R + I Sbjct: 294 SRDIAELRGPAFTVAPGQTTTTEARLWVGPKLVEQITKEHVK-GLDRVVDYSRFQLMALI 352 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 + +F ++S+ +L+ N+G AI+ V +++ +PL+ QY S A M+ QP++ +L+E+ Sbjct: 353 GQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSASQYKSAAKMRKFQPRLQQLKER 412 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q Q+AM++LYK INP+ GC+PIL+Q+P+FFA+Y V+ S+E+R AP+ GWI Sbjct: 413 Y-GEDRQKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWLGWI 471 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMIL 520 +DL DP I P++ + M+ K++P P D ++ Sbjct: 472 QDLTTRDPYF-------------------ILPLLNIVIMWATQKLTPTPAGMDPIAGKMM 512 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA--EIGLIDRLR 571 MP++F ++ P+GL +YW + ++++ Q +++ H + ++ Sbjct: 513 QVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIRQHADFSRKRSRENIK 565 >gi|291285982|ref|YP_003502798.1| membrane protein insertase, YidC/Oxa1 family [Denitrovibrio acetiphilus DSM 12809] gi|290883142|gb|ADD66842.1| membrane protein insertase, YidC/Oxa1 family [Denitrovibrio acetiphilus DSM 12809] Length = 509 Score = 279 bits (713), Expect = 9e-73, Method: Composition-based stats. Identities = 150/561 (26%), Positives = 243/561 (43%), Gaps = 60/561 (10%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N N +AI LS +++ A+Q F+ P+ N +++ QT Q+ A I Q Sbjct: 2 NKNTVLAIGLSALVILAFQVFFA-PKPTVQNQVQQSAQTEDNKGQIVPVEDAQPITIEEQ 60 Query: 64 ALSMSPRV----ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 P + ++ ++ N + + YH + + S + Sbjct: 61 TAQTEPMILETFDVLTDNVRYVFNANTGNIREAVINSYHSR-----DLTNVGFKSVNGDV 115 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 FA++ ++S + TT + + ++ ++ + D+ YL Sbjct: 116 VFADVPFISA-------------YTSDVQKTNGTTTVTFSGSQGDIVVTKKYVINDDSYL 162 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 K + N + I + + +G + G + E EK Sbjct: 163 VKGELVLNNTGDRTVNVPLTSGIGANAVDGFESDRYSFQGPLMFDGKRLKKE----KAEK 218 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 S + W+G KY+ K + ++ + P Sbjct: 219 VDKSIVVDHPKWVGYMSKYFMIGV-------AQDYSKGTISPAGGSAKITGSADMKLNPD 271 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 T LFAG KE+ + Y+ + E ID+G F FIA PM + Y+ V N Sbjct: 272 ARETVEFSLFAGPKEYDLLKSYDL-----KLEKSIDFGIFSFIAIPMLKFLKIIYSYVHN 326 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G+AI+L T+ +K+L FPL +K VS M ++QPK+ E++EKFK + A ++LY Sbjct: 327 YGVAIILLTLVIKILTFPLTQKSMVSMKKMSSLQPKMLEIKEKFKGDKEK-TNAATMELY 385 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K +NPL GC P++LQIP+FFA+YK + +++E++ APF WI DL+ DP I Sbjct: 386 KNEGVNPLGGCLPMVLQIPIFFALYKTLLLAIELQGAPFMLWITDLSLKDPYYIS----- 440 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSFPAGL 538 PI+M SMF+Q KM+P D Q I +MP++F F +FPAGL Sbjct: 441 --------------PILMGASMFLQQKMTPSTAQDPLQQKIFTFMPLIFTFLFLTFPAGL 486 Query: 539 IIYWSWSNVISIVQQAVIMKM 559 ++YW +NV+SI QQ I K Sbjct: 487 VVYWLTNNVLSIAQQYFINKK 507 >gi|255321601|ref|ZP_05362759.1| inner membrane protein OxaA [Campylobacter showae RM3277] gi|255301457|gb|EET80716.1| inner membrane protein OxaA [Campylobacter showae RM3277] Length = 520 Score = 277 bits (707), Expect = 4e-72, Method: Composition-based stats. Identities = 124/561 (22%), Positives = 227/561 (40%), Gaps = 60/561 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M +A LS I A+ F++ + N+ +Q Q N ++ A Sbjct: 5 MSVQKRVLLATVLSFIFFIAYDYFFIPKNLPTDQNQTVAVQQSSQANAAPSANTASATGA 64 Query: 61 RAQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + S + +K I+ G + L + + A Sbjct: 65 PQAVTTQSREIAVIKGEHFEARIDELG-RISKFYLNDEKYKNAEG-------NRIELAGA 116 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHY 178 L+ + + + G+I + P +V + I+ + Sbjct: 117 QPLPLEVRFSDKALNEQAFKVAYTSDVGEINLASEPKSIVLTQNLEGSSVTKKITFYPNG 176 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 + + +V+ +P A +++ V + + + Sbjct: 177 SYDLDLSVS--------AGEYYVTPGFRPSVAIDSYTVHGALLKHNDG----KLTIIEDG 224 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + + + SD+Y+ ++F K + + Sbjct: 225 DVDATESFNNVNIAAASDRYYTALFFKFDGLLNPVVSKDGAGNAVIFVKG---------- 274 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 + GAK+ T+ ++ +I++GWF FIAKPMF +++ Y +G Sbjct: 275 --EQNFKAKGYIGAKDHATLSQINEE-----LVDVIEYGWFTFIAKPMFAFLNWLYGYIG 327 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G AI++ T+ V++ K +S +K++ PK+ EL+ K+K PQ L M++L Sbjct: 328 NWGWAIVVLTLTVRIALSWFTYKGMLSMNKLKDLAPKVKELQAKYKG-DPQKLNMHMMEL 386 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK + NP+ GC PIL+QIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 387 YKKNGANPMGGCLPILMQIPIFFAIYRVLLNAIELKAAPWILWIHDLSVMDPYF------ 440 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 + PI+M +MF+Q K++P +D Q I+ ++P++F F +FPAG Sbjct: 441 -------------VLPILMGATMFLQQKLTPTTFSDPMQEKIMKFLPLIFTFFFVTFPAG 487 Query: 538 LIIYWSWSNVISIVQQAVIMK 558 L +YW +NV S++QQ + K Sbjct: 488 LTLYWFVNNVCSVIQQVFVNK 508 >gi|71275537|ref|ZP_00651823.1| 60 kDa inner membrane protein [Xylella fastidiosa Dixon] gi|71900184|ref|ZP_00682324.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1] gi|170731353|ref|YP_001776786.1| putative inner membrane protein translocase component YidC [Xylella fastidiosa M12] gi|254778175|sp|B0U6I1|OXAA_XYLFM RecName: Full=Inner membrane protein oxaA gi|71163837|gb|EAO13553.1| 60 kDa inner membrane protein [Xylella fastidiosa Dixon] gi|71730073|gb|EAO32164.1| 60 kDa inner membrane protein [Xylella fastidiosa Ann-1] gi|167966146|gb|ACA13156.1| 60kDa inner-membrane protein [Xylella fastidiosa M12] Length = 565 Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats. Identities = 121/593 (20%), Positives = 229/593 (38%), Gaps = 50/593 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN-------IQTVKQPNQVDNSY 53 M + + L+V + W ++ + N P + Sbjct: 1 MNQTRVLLIFSWLTVATLL-WMDWGKNKNETLEISASHNLGVDSHLELEHAVPQINAGAV 59 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A P + + L ++ G +L + + + LL+ Sbjct: 60 PVQKDSQLIAAAPKVPVINVTTDVLQLKLD--GFSILAADLLRFPQSKDRGAKPIKLLTD 117 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFE 169 Y A +VS +N+ S + +LV + AN + Sbjct: 118 DPNY-PYSATTGWVSQSNSPVPNLSTFLPEQSGVSYKLANDQDRLVVPFVWTAANGVSIR 176 Query: 170 RTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV------QEGFIA 222 RT + Y I D + N+ ++ R N G + Sbjct: 177 RTFTFERGRYAILIRDEIRNSGETPWNAYVFRKLSRVPIPNILNRAMTNPDSFSFNGAVW 236 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + D N W+ + ++ + +IP K+ + L+ Sbjct: 237 YSEKGGYERRAFKDYMNDGGLNREIGGGWIALLQHHFFTAWIPQKDQ---ASLYLLAQNG 293 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 +R A+ T+ PG+S T L+ G K I + R + I Sbjct: 294 SRDIAELRGPAFTVAPGQSTMTEARLWVGPKLVEQITKEHVK-GLDRVVDYSRFQLMALI 352 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 + +F ++S+ +L+ N+G AI+ V +++ +PL+ QY S A M+ QP++ +L+E+ Sbjct: 353 GQGLFWILSHLNSLLHNWGWAIVGLVVLLRIAMYPLSAAQYKSAAKMRKFQPRLQQLKER 412 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + Q Q+AM++LYK INP+ GC+PIL+Q+P+FFA+Y V+ S+E+R AP+ GWI Sbjct: 413 Y-GEDRQKFQQAMMELYKKEKINPMGGCFPILIQMPIFFALYWVLVESVELRQAPWLGWI 471 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMIL 520 +DL DP I P++ + M+ K++P P D ++ Sbjct: 472 QDLTTRDPYF-------------------ILPLLNIVIMWATQKLTPTPAGMDPIAGKMM 512 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA--EIGLIDRLR 571 MP++F ++ P+GL +YW + ++++ Q ++ + + ++ Sbjct: 513 QVMPLIFGVMMAFVPSGLALYWVINGGLNLLIQWWMIHQYADFSRKRSRENIK 565 >gi|57242374|ref|ZP_00370313.1| 60 kDa inner-membrane protein [Campylobacter upsaliensis RM3195] gi|57017054|gb|EAL53836.1| 60 kDa inner-membrane protein [Campylobacter upsaliensis RM3195] Length = 537 Score = 275 bits (702), Expect = 2e-71, Method: Composition-based stats. Identities = 135/579 (23%), Positives = 263/579 (45%), Gaps = 60/579 (10%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPR-------IEEMNNERKNIQTVKQPNQVDNSYAA 55 + +A+ LS I A+ F++ + + +N++ P ++ + Sbjct: 11 QQKRILLAVVLSFIFFVAYDYFFLPKPNLNEQNITQNNTTKTQNLEANAAPKLQEDLAKS 70 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 V + ++ +++P I+ G + L+ ++ + + L++ Sbjct: 71 VETNGALSSVKSGVLASVESPHFKAEIDTLG-RISSFYLKD-KKYLNEDKNQINLIAKDQ 128 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 EL + +++ N E ++ + + + ++ +N +N+ E+ I+ D Sbjct: 129 NPRP--LELRFSNSSINEEAFKTDYKTSTNELFLDINESKKLILTQNLSNLKVEKIITFD 186 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++I + N+ P +P A +++ V + + + + Sbjct: 187 PRGNYEIEVRLNQNA-------PFFITPGFRPSIAVDSYTVHGALVLDSENTTH---TFE 236 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D + ++ D+Y+AS F +K + + Sbjct: 237 DGDMDMEERIDKAFIASAF-DRYYAS------------FFYNFDKPLNLTISKDTNDNPI 283 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + + GAKE + +K R E ++++GWF FIAKPM++ + + + Sbjct: 284 LFAYADREFKAGGYIGAKEHEALRAIDK-----RLEDVVEFGWFTFIAKPMYVGLDFLFK 338 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +GN+G AI++ T+ V+++ FPL K +S +K++ PK+ E+RE++K PQ + M Sbjct: 339 HIGNWGWAIVVLTLIVRVILFPLTYKSMISMNKLKDLAPKMKEIRERYKG-DPQKMNMHM 397 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI+DL+A DP Sbjct: 398 MELYKKHGANPMSGCLPILLQIPIFFAIYRVLFNAIELKDAPWIFWIQDLSAMDPYF--- 454 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534 I PI+M +MF+Q ++P D QA I+ ++PV+F +F Sbjct: 455 ----------------ILPILMGATMFLQQLITPMTIQDPLQAKIMKFLPVIFTIFFITF 498 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 PAGL +YW +N+ S++QQ +I KM E + ++ Sbjct: 499 PAGLTLYWFINNLCSLLQQWIINKMFEKEHHKRESEKAK 537 >gi|315638576|ref|ZP_07893750.1| inner membrane protein [Campylobacter upsaliensis JV21] gi|315481200|gb|EFU71830.1| inner membrane protein [Campylobacter upsaliensis JV21] Length = 537 Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats. Identities = 136/579 (23%), Positives = 264/579 (45%), Gaps = 60/579 (10%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPR-------IEEMNNERKNIQTVKQPNQVDNSYAA 55 + +A+ LS I A+ F++ + + +N++ P ++ + Sbjct: 11 QQKRILLAVVLSFIFFVAYDYFFLPKPNLNEQNITQNNTTKTQNLEANAAPKLQEDLAKS 70 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 V + ++ +++P I+ G + L+ ++ + + L++ Sbjct: 71 VETNGALSSVKSGVLASVESPHFKAEIDTLG-RISSFYLKD-KKYLNEDKSQINLIAKEQ 128 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 EL + +++ N E ++ + + T + ++ +N +N+ E+ I+ D Sbjct: 129 NPRP--LELRFSNSSINEEAFKTDYKASANELFLDTNESKKLILTQNLSNLKVEKIITFD 186 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++I + N+ P +P A +++ V + + + + Sbjct: 187 PRGNYEIEVRLNQNA-------PFFITPGFRPSIAVDSYTVHGALVLDSENTTH---TFE 236 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D + ++ D+Y+AS F +K + + Sbjct: 237 DGDMDMEERIDKAFIASAF-DRYYAS------------FFYNFDKPLNLTISKDTNDNPI 283 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + + GAKE + +K R E ++++GWF FIAKPM++ + + + Sbjct: 284 LFAYADREFKAGGYIGAKEHEALRAIDK-----RLEDVVEFGWFTFIAKPMYVGLDFLFK 338 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +GN+G AI++ T+ V+++ FPL K +S +K++ PK+ E+RE++K PQ + M Sbjct: 339 HIGNWGWAIVVLTLIVRVILFPLTYKSMISMNKLKDLAPKMKEIRERYKG-DPQKMNMHM 397 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI+DL+A DP Sbjct: 398 MELYKKHGANPMSGCLPILLQIPIFFAIYRVLFNAIELKDAPWIFWIQDLSAMDPYF--- 454 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534 I PI+M +MF+Q ++P D QA I+ ++PV+F +F Sbjct: 455 ----------------ILPILMGATMFLQQLITPMTIQDPLQAKIMKFLPVIFTIFFITF 498 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 PAGL +YW +N+ S++QQ +I KM E + ++ Sbjct: 499 PAGLTLYWFINNLCSLLQQWIINKMFEKEHHKRESEKAK 537 >gi|223039678|ref|ZP_03609964.1| inner membrane protein OxaA [Campylobacter rectus RM3267] gi|222879061|gb|EEF14156.1| inner membrane protein OxaA [Campylobacter rectus RM3267] Length = 520 Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats. Identities = 123/568 (21%), Positives = 230/568 (40%), Gaps = 58/568 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M +A LS I A+ F++ + N+ Q Q N ++ A Sbjct: 5 MSVQKRVILATVLSFIFFIAYDYFFIPKNLPLDQNQTVAAQQTSQANAAPSANTASGASA 64 Query: 61 RAQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + S + +K I+ G + L +++ + L Sbjct: 65 PQAVATQSREIAVIKGEHFEARIDELG-RISKFYLNDEKYK-NADGERIEL----AGAQP 118 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 E+ + A N + ++ + + I L + + ++ Sbjct: 119 LPLEVRFSDKALNEQAFKVAYASDVSEINLTSEPKSIVLTQNLEGSSVTKKITFYPNGSY 178 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + + +P + +++ V + + + Sbjct: 179 ---------DLDLSVSAGEYYVTPGFRPNVSIDSYTVHGALLKHNDG----KLTIIEDGD 225 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + + + SD+Y+ ++F K + + Sbjct: 226 VDATESFNNVNIAAASDRYYTALFFKFDGLLNPVVSKDGAGNAVIFVKG----------- 274 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + GAK+ T+ ++ +I++GWF FIAKPMF ++ Y +GN Sbjct: 275 -EQNFKAKGYIGAKDHATLSQINEE-----LVDVIEYGWFTFIAKPMFAFLNLLYGYIGN 328 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI++ T+ ++++ FPL K +S +K++ PK+ EL+ K+K PQ L M++LY Sbjct: 329 WGWAIVVLTLVIRIVLFPLTYKGMLSMNKLKDLAPKVKELQAKYKG-DPQKLNMHMMELY 387 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K + NP+ GC PIL+QIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 388 KKNGANPMGGCLPILMQIPIFFAIYRVLLNAIELKAAPWILWIHDLSVMDPYF------- 440 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538 + PI+M +MF+Q K++P +D Q I+ ++P++F F +FPAGL Sbjct: 441 ------------VLPILMGATMFLQQKLTPTTFSDPMQEKIMKFLPLIFTFFFVTFPAGL 488 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGL 566 +YW +NV S++QQ + K+ + Sbjct: 489 TLYWFVNNVCSVIQQIFVNKLFEKHKKV 516 >gi|291278771|ref|YP_003495606.1| preprotein translocase YidC subunit [Deferribacter desulfuricans SSM1] gi|290753473|dbj|BAI79850.1| preprotein translocase YidC subunit [Deferribacter desulfuricans SSM1] Length = 504 Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats. Identities = 136/560 (24%), Positives = 240/560 (42%), Gaps = 57/560 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ +A+ LS++++ +Q Y P + +E K ++ N+ + Sbjct: 1 MD--KRTLIAVLLSILVLMIFQFMY-TPSQAPVVSENKTAESTPNVNKEPEKIDLNIAQK 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + E+ + S + + Y + + V + + Y Sbjct: 58 SNEKSFKPDVFEVSTDYVSISFDKNSGDVYSAAILKYR---NKDIGKVVF---KDGEKNY 111 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 + + L T + + ++ + ++ YL Sbjct: 112 LSIDNLNYDKVEYNLEKGK------------DNTIVNFNCFVGDVVITKSYRISNKKYLI 159 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 ++N ++ I + + EG I G K E +K Sbjct: 160 DYYLKISNTGDKTVKLPLTITIGPDFGEGFEKSKYAFEGPIIFDGKKVYKE----RPDKV 215 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 W+G + KY+ + KY + + N P + Sbjct: 216 KKDVVVNKPLWIGYTTKYFLFS--TATNFEKGFIKKYKDSAIVGGEINYILN-----PRE 268 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + LF G KE+ + +FE I++G F F+A PM +L++ FY+ + N+ Sbjct: 269 TKQLKLALFTGPKEYKLLKSSGY-----KFEKSINFGIFSFLAIPMLLLLNMFYSFLHNY 323 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI+L T+ +K++ +PL K S M+ IQP+I ++REKFK PQ + AM++LYK Sbjct: 324 GVAIILLTIIIKIVTYPLTLKSMTSMKKMQLIQPEIQKIREKFKG-DPQKMNAAMMELYK 382 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 + +NP+ GC P+L+QIP+FFA+YK + +S+E++ +PF+GWI DL+ DP Sbjct: 383 KYGVNPMGGCLPMLIQIPIFFALYKALLVSIELKGSPFFGWITDLSMKDPYY-------- 434 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 I PI+M ++MFIQ KM+P D Q + +MP++F F +FP+GL+I Sbjct: 435 -----------ITPILMGITMFIQQKMTPQAGDPTQQKLFMFMPIIFTFLFLNFPSGLVI 483 Query: 541 YWSWSNVISIVQQAVIMKMH 560 YW +N+++I+QQ I K Sbjct: 484 YWLTNNILTIIQQYFINKKT 503 >gi|15616645|ref|NP_239857.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11131221|sp|P57131|OXAA_BUCAI RecName: Full=Membrane protein oxaA gi|25299099|pir||G84931 60 kD inner-membrane protein [imported] - Buchnera sp. (strain APS) gi|10038708|dbj|BAB12743.1| 60 kD inner-membrane protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 532 Score = 270 bits (690), Expect = 4e-70, Method: Composition-based stats. Identities = 139/571 (24%), Positives = 254/571 (44%), Gaps = 62/571 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N+F+ L + WQ + + + NE+ I Sbjct: 1 MEVQRNFFIFAFL-FVSFLLWQAWQSQMFLNKKTNEK-----------------IDPIFH 42 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ++ +KN + +N+ G ++ +L Y + S+ P L + + Y Sbjct: 43 FIDVKKNKKKIFIKNDVISLVVNMYGGDVEEASLLAYKDTLYSSRPFKLL--ETGSDFIY 100 Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLD 175 A+ + + + +S +++ + +L + + N +++++T L Sbjct: 101 QAQSGLIGKDGPDSSINDSRPLYSANKNFFVLGPNEKELRVPIKWLSKNGVIYKKTFILK 160 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227 + Y +I V N S + + + G+I + + G D Sbjct: 161 PNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKRNVYSGNFALQTFRGAAYSSDDN 220 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + + + W+ + +Y+A +IP L H Sbjct: 221 KYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIPDNLGKNTIYTSSLD--HDTAVI 278 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + I I P + L+ G K + P ++ +D+GW +F+++P+F Sbjct: 279 GYKSPIINIPPNSRSIIKSKLWIGPKIQKEMKLVA-----PNLDLTVDYGWLWFLSQPLF 333 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L++ Y+++GN+G +I+L T ++ L +PL K QY+S A M+ +QPKI E++EKF + Sbjct: 334 KLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQYISMAKMRALQPKIQEIKEKFSKDK 393 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + MI LYK INPL G PI +Q+P+F ++Y ++ S+E+RHAPF WI DL++ Sbjct: 394 -QRISQEMILLYKKEKINPLGGFLPIFIQMPIFLSLYYMLIGSVELRHAPFLLWIHDLSS 452 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWMPV 525 DP + P+IM L+MF K+S +D Q I+N+MPV Sbjct: 453 QDPYY-------------------VLPVIMGLTMFFIQKISSTNHISDPLQKKIMNFMPV 493 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F FP+GL++Y+ SN+++I+QQ I Sbjct: 494 IFTAFFLWFPSGLVLYYIISNLVTIIQQKFI 524 >gi|219681403|ref|YP_002467788.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471077|ref|ZP_05635076.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254772755|sp|B8D8H9|OXAA_BUCA5 RecName: Full=Membrane protein oxaA gi|219624246|gb|ACL30401.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 532 Score = 269 bits (688), Expect = 7e-70, Method: Composition-based stats. Identities = 138/571 (24%), Positives = 254/571 (44%), Gaps = 62/571 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N+F+ L + WQ + + + NE+ I Sbjct: 1 MEVQRNFFIFAFL-FVSFLLWQAWQSQMFLNKKTNEK-----------------IDPIFH 42 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ++ +KN + +N+ G ++ +L Y + S+ P L + + Y Sbjct: 43 FIDVKKNKKKIFIKNDVISLVVNMYGGDVEEASLLAYKDTLYSSRPFKLL--ETGSDFIY 100 Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLD 175 A+ + + + +S +++ + +L + + N +++++T L Sbjct: 101 QAQSGLIGKDGPDSSINDSRPLYSANKNFFVLGPNEKELRVPIKWVSKNGVIYKKTFILK 160 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227 + Y +I V N S + + + G+I + + G D Sbjct: 161 PNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKRNVYSGNFALQTFRGAAYSSDDN 220 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + + + W+ + +Y+A +IP L H Sbjct: 221 KYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIPDNLGKNTIYTSSLD--HDTAVI 278 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + I I P + L+ G + + P ++ +D+GW +F+++P+F Sbjct: 279 GYKSPIINIPPNSRSIIKSKLWIGPEIQKEMKLVA-----PNLDLTVDYGWLWFLSQPLF 333 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L++ Y+++GN+G +I+L T ++ L +PL K QY+S A M+ +QPKI E++EKF + Sbjct: 334 KLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQYISMAKMRALQPKIQEIKEKFSKDK 393 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + MI LYK INPL G PI +Q+P+F ++Y ++ S+E+RHAPF WI DL++ Sbjct: 394 -QRISQEMILLYKKEKINPLGGFLPIFIQMPIFLSLYYMLIGSVELRHAPFLLWIHDLSS 452 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWMPV 525 DP + P+IM L+MF K+S +D Q I+N+MPV Sbjct: 453 QDPYY-------------------VLPVIMGLTMFFIQKISSTNHISDPLQKKIMNFMPV 493 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F FP+GL++Y+ SN+++I+QQ I Sbjct: 494 IFTAFFLWFPSGLVLYYIISNLVTIIQQKFI 524 >gi|219681959|ref|YP_002468343.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254772756|sp|B8D6T3|OXAA_BUCAT RecName: Full=Membrane protein oxaA gi|219621692|gb|ACL29848.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085765|gb|ADP65847.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086342|gb|ADP66423.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 532 Score = 269 bits (687), Expect = 8e-70, Method: Composition-based stats. Identities = 138/571 (24%), Positives = 254/571 (44%), Gaps = 62/571 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N+F+ L + WQ + + + NE+ I Sbjct: 1 MEVQRNFFIFAFL-FVSFLLWQAWQSQMFLNKKTNEK-----------------IDPIFH 42 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ++ +KN + +N+ G ++ +L Y + S+ P L + + Y Sbjct: 43 FIDVKKNKKKIFIKNDVISLVVNMYGGDVEEASLLAYKDTLYSSRPFKLL--ETGSDFIY 100 Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLD 175 A+ + + + +S +++ + +L + + N +++++T L Sbjct: 101 QAQSGLIGKDGPDSSINDSRPLYSANKNFFVLGPNEKELRVPIKWLSKNGVIYKKTFILK 160 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227 + Y +I V N S + + + G+I + + G D Sbjct: 161 PNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKRNVYSGNFALQTFRGAAYSSDDN 220 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + + + W+ + +Y+A +IP L H Sbjct: 221 KYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIPDNLGKNTIYTSSLD--HDTAVI 278 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + I I P + L+ G + + P ++ +D+GW +F+++P+F Sbjct: 279 GYKSPIINIPPNSRSIIKSKLWIGPEIQKEMKLVA-----PNLDLTVDYGWLWFLSQPLF 333 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L++ Y+++GN+G +I+L T ++ L +PL K QY+S A M+ +QPKI E++EKF + Sbjct: 334 KLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQYISMAKMRALQPKIQEIKEKFSKDK 393 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + MI LYK INPL G PI +Q+P+F ++Y ++ S+E+RHAPF WI DL++ Sbjct: 394 -QRISQEMILLYKKEKINPLGGFLPIFIQMPIFLSLYYMLIGSVELRHAPFLLWIHDLSS 452 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWMPV 525 DP + P+IM L+MF K+S +D Q I+N+MPV Sbjct: 453 QDPYY-------------------VLPVIMGLTMFFIQKISSTNHISDPLQKKIMNFMPV 493 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F FP+GL++Y+ SN+++I+QQ I Sbjct: 494 IFTAFFLWFPSGLVLYYIISNLVTIIQQKFI 524 >gi|224418480|ref|ZP_03656486.1| putative inner membrane protein translocase component YidC [Helicobacter canadensis MIT 98-5491] gi|253827793|ref|ZP_04870678.1| putative inner membrane protein translocase component YidC [Helicobacter canadensis MIT 98-5491] gi|313142010|ref|ZP_07804203.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253511199|gb|EES89858.1| putative inner membrane protein translocase component YidC [Helicobacter canadensis MIT 98-5491] gi|313131041|gb|EFR48658.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 536 Score = 269 bits (687), Expect = 9e-70, Method: Composition-based stats. Identities = 125/559 (22%), Positives = 230/559 (41%), Gaps = 53/559 (9%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +A+ L++ + FY E +IQT + + + Sbjct: 9 NSQTRIIIAVVLALAFFVPYSYFYAPKPQENNATATSSIQTTQNLPITQEAKPNPTQESA 68 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + + + I+ G + + L+ ++ + L S Sbjct: 69 QLSTTQEIITTINGENFEYQIDRLG-RITQVTLKE--EKYHKDAKNLELFSNDIANQNNP 125 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHYLF 180 L+ + + NT + + I P L N +TI+ + L+ Sbjct: 126 KILEIRFADSMLNQQAFNTPYQTSATNIELKDKPQSLTLTQKLENFTLTKTITFHPNGLY 185 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 ++ + N I +A N V +G I D ++ + D Sbjct: 186 EVKVEIPQN--------YTYFISPGMRPSAENDSYVFKGVIIKEQDGTITTIEDGDSSGQ 237 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 S ++S L D+Y+ ++F + Sbjct: 238 S---NFTNSSILAAVDRYYTTLFFSQSNNLNAIVLSNAEEN------------PMPFLSA 282 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + + G K++ + P ++++G F AKP+F+L+ Y+ GN+ Sbjct: 283 NGNIELSGYIGPKDYRLLESIN-----PNLTEVVEYGIITFFAKPLFLLLETLYDWCGNW 337 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+L T+ V+++ +PL K VS +K + PK+ E+++K+K PQ LQ M++LYK Sbjct: 338 GWAIILLTLIVRVVLYPLTYKGMVSMQKLKELAPKMKEIQQKYKG-EPQKLQVHMMELYK 396 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 H NP+ GC P+LLQ+PVFFAIY+V+ ++E++ A + WI+DL+ DP Sbjct: 397 KHGANPMGGCLPLLLQMPVFFAIYRVLYNAIELKGAAWLLWIQDLSVMDPYF-------- 448 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539 + PI+M ++M++Q ++P D Q I ++P++F +FP+GL+ Sbjct: 449 -----------VLPILMGITMYLQQHLTPTTFNDPIQEKIFKFLPLIFTIFFVTFPSGLV 497 Query: 540 IYWSWSNVISIVQQAVIMK 558 +YW +N+ SI+QQ +I K Sbjct: 498 LYWFVNNIFSILQQLLINK 516 >gi|313672991|ref|YP_004051102.1| membrane protein insertase, yidc/oxa1 family [Calditerrivibrio nitroreducens DSM 19672] gi|312939747|gb|ADR18939.1| membrane protein insertase, YidC/Oxa1 family [Calditerrivibrio nitroreducens DSM 19672] Length = 504 Score = 269 bits (686), Expect = 1e-69, Method: Composition-based stats. Identities = 143/561 (25%), Positives = 245/561 (43%), Gaps = 57/561 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ +A+A+S++I+ A+Q F+ + + + K + V + I + Sbjct: 1 MD--KRTLLAVAISIMILIAYQFFFAPAPMP--VAQDNSATLSKDKDNVASKSEVKTISN 56 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ++ N + + + +++ Y P+VT + ++ Sbjct: 57 LTTKSKSIEVEKVSNGFVEIYFDKHSGNINKVSVIKYR---DKKLPMVTFKTDNDNY--- 110 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 +++ + + K L I N + + E YL Sbjct: 111 ------------MKVLDGYGDNYSMDIKELDGKKIITFSALQNNIGITKTYTIGKEGYLI 158 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + V+NNS ++ I + + + EG + G +++ EK Sbjct: 159 DLNLKVSNNSDQTVKLEGNIDIGPGFGEGFEKSSYIFEGPMIYNG----EKKEEVAPEKI 214 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 + ++ W+G + KY+ I + +I + P Sbjct: 215 KDTIKLDAPKWIGYTTKYYLIAAIDGNLELGKI------EKVGESAIVKGVKQIILNPKS 268 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + ++ G KE+ + + E ID+GWF F+A PM M + Y+ N+ Sbjct: 269 TSNIKFNIYVGPKEYDLLKSFNL-----GLEHSIDFGWFKFLAVPMLKFMIFIYSFTKNY 323 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI++ T+ VKLL +PL K S M+ IQPK+ E++EKFK PQ + AM++LY+ Sbjct: 324 GVAIIILTIIVKLLTYPLTIKSMTSMKKMQQIQPKLMEIKEKFKN-DPQKMNTAMMELYR 382 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 H +NP+ GC P+++QIP+FFA+YK + +S+E++ +PF WI DL+ DP Sbjct: 383 KHGVNPMGGCLPMIIQIPIFFALYKALLVSVELKGSPFILWITDLSEKDPYY-------- 434 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 I PIIM ++MFIQ KM+P D Q I MPV+F F SFP+GL+I Sbjct: 435 -----------ITPIIMGITMFIQQKMTPSTMDPMQQKIFLMMPVIFTFLFLSFPSGLVI 483 Query: 541 YWSWSNVISIVQQAVIMKMHG 561 YW +N++SI+QQ I K Sbjct: 484 YWLTNNILSIIQQYYINKKLT 504 >gi|311086918|gb|ADP66998.1| 60 kDa inner-membrane protein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 532 Score = 269 bits (686), Expect = 1e-69, Method: Composition-based stats. Identities = 137/571 (23%), Positives = 252/571 (44%), Gaps = 62/571 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N+F+ L + WQ + + + NE+ I Sbjct: 1 MEVQRNFFIFAFL-FVSFLLWQAWQSQMFLNKKTNEK-----------------IDPIFH 42 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ++ +KN + +N+ G ++ +L Y + S+ P L + + Y Sbjct: 43 FIDVKKNKKKIFIKNDVISLVVNMYGGDVEEASLLAYKDTLYSSRPFKLL--ETGSDFIY 100 Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLD 175 A+ + + + +S +++ + +L + + N +++++ L Sbjct: 101 QAQSGLIGKDGPDSSINDSRPLYSANKNFFVLGPNEKELRVPIKWLSKNGVIYKKIFILK 160 Query: 176 EH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG-------VQEGFIAVLGDK 227 + Y +I V N S + + + G+I + G D Sbjct: 161 PNRYDVQIEYDVYNPSKESLNMNIFGQIKQTINLPKKRNVYSRNFALQTFRGAAYSSDDN 220 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + + + W+ + +Y+A +IP L H Sbjct: 221 KYEKYKFDMIANNKNLHIMTESGWIAMLQQYFAVAWIPDNLGKNTIYTSSLD--HDTAVI 278 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + I I P + L+ G + + P ++ +D+GW +F+++P+F Sbjct: 279 GYKSPIINIPPNSRSIIKSKLWIGPEIQKEMKLVA-----PNLDLTVDYGWLWFLSQPLF 333 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L++ Y+++GN+G +I+L T ++ L +PL K QY+S A M+ +QPKI E++EKF + Sbjct: 334 KLLTILYSIIGNWGFSIILITFIMRGLTYPLTKAQYISMAKMRALQPKIQEIKEKFSKDK 393 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + + MI LYK INPL G PI +Q+P+F ++Y ++ S+E+RHAPF WI DL++ Sbjct: 394 -QRISQEMILLYKKEKINPLGGFLPIFIQMPIFLSLYYMLIGSVELRHAPFLLWIHDLSS 452 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWMPV 525 DP + P+IM L+MF K+S +D Q I+N+MPV Sbjct: 453 QDPYY-------------------VLPVIMGLTMFFIQKISSTNHISDPLQKKIMNFMPV 493 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F FP+GL++Y+ SN+++I+QQ I Sbjct: 494 IFTAFFLWFPSGLVLYYIISNLVTIIQQKFI 524 >gi|254509058|ref|ZP_05121161.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus 16] gi|219547991|gb|EED25013.1| inner membrane protein, 60 kDa [Vibrio parahaemolyticus 16] Length = 448 Score = 268 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 125/472 (26%), Positives = 212/472 (44%), Gaps = 37/472 (7%) Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL----TPTT 154 ++ S V L + + + A+ V + + + + Sbjct: 2 AEMDSADAFVLL--KNEPGHQFIAQSGLVGPQGIDLSSTNRPAYAVSTDSFTLADGQDEL 59 Query: 155 PIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-T 213 + + + + I Y + V NNS + F + ++ + T Sbjct: 60 RVPMTYAANGLEYTKTFILKRGSYAIDVEYNVVNNSGNNATFGMYAHLRQNLLDAGGSIT 119 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFH 272 G D + + D++ ++S W + Y+AS +IP E + Sbjct: 120 MPTYRGGAYSTEDTRYKKYSFEDMQDRNLSLNLPDGQGWAAMIQHYFASAWIPRNEPGTN 179 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + + + TI G S T L+ G K + P ++ Sbjct: 180 LYTRVIGNLGD---IGVRMPNKTIATGDSAQMTATLWVGPKLQDQMAEVA-----PNLDL 231 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 ++D+GW +FIAKP+ L+S+ + VGN+G+AI+ T V+ +PL K QY S A M+ + Sbjct: 232 VVDYGWLWFIAKPLHSLLSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRML 291 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ +RE+ Q + + M++LYK +NPL GC P++LQ+P+F A+Y + S+E Sbjct: 292 QPKLQAMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVE 350 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511 +RH+PF+GWI DL+A DP I P++M SMF+ KMSP Sbjct: 351 LRHSPFFGWIHDLSAQDPYY-------------------ILPLLMGASMFLIQKMSPTTV 391 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K + Sbjct: 392 TDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 443 >gi|238783045|ref|ZP_04627072.1| Inner membrane protein oxaA [Yersinia bercovieri ATCC 43970] gi|238716046|gb|EEQ08031.1| Inner membrane protein oxaA [Yersinia bercovieri ATCC 43970] Length = 398 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 114/409 (27%), Positives = 199/409 (48%), Gaps = 35/409 (8%) Query: 158 LVFKNANNILFERTISLDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTAT 211 + F + +F +T L + + V N S + + G++ + T + Sbjct: 1 MTFTGKDGSVFTKTFVLKRNDYAIGVDYHVKNASDAPLELTLFGQLKQSINLPKHRDTGS 60 Query: 212 NTFGVQEGFIAVLGDKSLVEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 N F + A +KY + + W+ + +Y+A+ +IP+ Sbjct: 61 NNFALHTYRGAAYSSDDTKYKKYSFSDIEDKSLDITTKGGWVAMLQQYFATAWIPAANE- 119 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + F G+ F + I PG+ L+ G + + P Sbjct: 120 -TNTFYSADLGNGLAAIGFKGMPVVIQPGEQKQLGATLWVGPEIQDKMAAIA-----PHL 173 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ +D+GW +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ Sbjct: 174 DLTVDYGWLWFISQPLFKLLKFIHSFVGNWGFSIIVITFIVRGIMYPLTKAQYTSMAKMR 233 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +QPK+ +RE+ Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S Sbjct: 234 LLQPKLAAMRERIGDDK-QRMSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLMSS 292 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+RHAPF WI DL+A DP I PI+M ++M+ KMSP Sbjct: 293 VELRHAPFILWIHDLSAQDPYY-------------------ILPILMGITMYFIQKMSPT 333 Query: 511 P-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q I+ +MPV+F FPAGL++Y+ SN+++I+QQ +I + Sbjct: 334 TVTDPMQQKIMTFMPVIFTVFFLWFPAGLVLYYIVSNLVTILQQQLIYR 382 >gi|32490762|ref|NP_871016.1| hypothetical protein WGLp013 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|38502995|sp|Q8D3I8|OXAA_WIGBR RecName: Full=Membrane protein oxaA gi|25165968|dbj|BAC24159.1| yidC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 540 Score = 267 bits (682), Expect = 4e-69, Method: Composition-based stats. Identities = 138/567 (24%), Positives = 252/567 (44%), Gaps = 49/567 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + N+ + I ++ +++ AWQ N + + Sbjct: 4 QNNFLFIAFIFVTFMMLDAWQ-------------SESYDYKSLDKNHIIEKKNIENKNIN 50 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY- 120 + S + + I IN G ++ +LR Y + +N P+ L N Sbjct: 51 KEVFSRENYITVITDLFILKINTYGGDIEEASLRTYLSNTKNNLPLKILDRSKNFIYKLK 110 Query: 121 --FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH- 177 F + N I +PN + L + + + L + N + + + ++ Sbjct: 111 SGFITKNDHDINNLIHIPNFISDKKLYILEDNSDYLQVPLFYNGENGLKYVKNFIFKKNS 170 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-----FGVQEGFIAVLGDKSLVEQ 232 + KI ++ N + D++ G++ + N F G + + Sbjct: 171 FSLKINYSIKNTNKDKMEMMFFGQLEQSIKDQEINNGYNFNFHTYRGAAYSSDNNKYKKY 230 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 +S+I N SN W+ + +Y+ +IP E + K + + F + Sbjct: 231 DFSEISNDKNLNVITSNGWIAMLQQYFIVAWIPKIENKYKFYTKNIPKD-EKVSIGFQSE 289 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 +I + + L+ G K ++ + + + +D+GW +FIA+P+ L+ + Sbjct: 290 LFSIDQEEEKNIESTLWIGPKLQDKMYEVDAN-----LGLTVDYGWLWFIAQPLLQLLKF 344 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 Y + N+GI+I++ T V+ + FPL K QY S A M+ +QPKI E++ KF + Sbjct: 345 IYKYINNWGISIIIITFMVRGIMFPLTKAQYTSMAKMRILQPKIIEIKNKFSNDK-KRQS 403 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 K M+ LYK +NPL GC P+++Q+P+F A+Y ++S S+E+RHA F WI DL++ DP Sbjct: 404 KEMMSLYKKQKVNPLGGCMPLIIQMPIFLALYYMLSGSVELRHAHFVLWINDLSSKDPYY 463 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I PIIM ++MF+ K+SP +D Q I+++MP++F Sbjct: 464 -------------------ILPIIMGITMFLIQKISPSSISDPVQKKIVSFMPLIFTIFF 504 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I K Sbjct: 505 LWFPSGLVLYYIISNLVTIIQQYIIYK 531 >gi|157164729|ref|YP_001466647.1| putative inner membrane protein translocase component YidC [Campylobacter concisus 13826] gi|157101469|gb|EAT97433.2| inner membrane protein OxaA [Campylobacter concisus 13826] Length = 517 Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats. Identities = 127/563 (22%), Positives = 233/563 (41%), Gaps = 67/563 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M +A LS++ + F E N + +Q +A Sbjct: 4 MSMQKRLLLAALLSIVFFIVYDFFMPKRAPLEQNQ----TTISQTMDQSKAPASANDTPK 59 Query: 61 RAQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTK 117 + L+ + + +K S I+ G + L Y + + L+S + Sbjct: 60 SNENLASNEIIATIKGQSYEAKIDKLG-RIAKFYLTEDKYKT---EDGNKIELVSQN--- 112 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDE 176 L+ + + ++ +I + P + + + + I Sbjct: 113 ---PLPLELRFNDSTLNADAFKVAYSSDVSEIDASSEPKTIKLTQNLDGVTVTKNIKFYP 169 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + +++ ++ + I R I + + ++ D E K Sbjct: 170 NGRYEVEVNLSKSVDYFITPGFRPNIAIDSYTVHGVMLRNTDDSLNIIEDGDAKEVK--- 226 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 Y + + + + + F + K + N + Sbjct: 227 --------------------NYANTTIAAASDRYYTALFYSFNKPFEAVVDKDANNNPIV 266 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 + + + G KE + ++ R +I++GWF FIAKPMF +++ +N Sbjct: 267 FVKTNDSLKLGAYIGPKEHKILSSMDE-----RLNDVIEYGWFTFIAKPMFAFLNFLHNY 321 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GN+G AI++ T+ ++++ FPL K +S +K + PK+ E++ K+K Q +Q M+ Sbjct: 322 IGNWGWAIVVLTLVIRIVLFPLTYKGMLSMNKLKELAPKVKEIQTKYKDDK-QKMQVHMM 380 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK H NP+ GC PILLQIPVFFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 381 ELYKKHGANPMGGCLPILLQIPVFFAIYRVLLNAIELKGAPWILWIHDLSVMDPYF---- 436 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 + PI+M L+MF+Q K++P D Q ++ ++P++F F +FP Sbjct: 437 ---------------VLPILMGLTMFLQQKLTPTTFTDPMQEKVMKFLPLIFTFFFVTFP 481 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 AGL +YW +NV S+VQQ + K Sbjct: 482 AGLTLYWFVNNVCSVVQQVFVNK 504 >gi|34557650|ref|NP_907465.1| putative inner membrane protein translocase component YidC [Wolinella succinogenes DSM 1740] gi|38502880|sp|P60037|OXAA_WOLSU RecName: Full=Inner membrane protein oxaA gi|34483367|emb|CAE10365.1| 60 KDA INNER-MEMBRANE PROTEIN [Wolinella succinogenes] Length = 536 Score = 266 bits (680), Expect = 6e-69, Method: Composition-based stats. Identities = 122/559 (21%), Positives = 217/559 (38%), Gaps = 59/559 (10%) Query: 6 NYFVAIALSVIIVYAWQNFYVY----PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +A A+S++ + F+ P E + ER Q Q + + Sbjct: 13 RILIATAISLLFFIPYSYFFAPVKEAPLKESTSMERAEQQAAPQTSSSPKEGQVSSVAMA 72 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + S ++ I+ G + + L+ P + Sbjct: 73 ETSPSKDIIATVQGSHFRLEIDSLG-RIAQVYLKDAKFLKEQKE------LPLLAPLSSL 125 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHYLF 180 L+ + + + TP L + ++ + Sbjct: 126 RPLEVRFSDATTNKEAFAKSYYSDRDLVEIRNTPETLTLTQELEGFKLTKKLTFYPDGNY 185 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + +P ++ F + G + + Sbjct: 186 DLEVET------SGSQKRFFLSPGARPIAESDKFAFNGVVLKESGGTIHTTED----GDA 235 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 E ++ D+Y+ ++F + ++ + + + Sbjct: 236 KKDEIFEGARFVASVDRYYTTLFFVKEPQGLRVVISKNAEKNPEPFVEALDH-------- 287 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + GAK+F + P ++++G+ F AKP+F+L+ + Y GN+ Sbjct: 288 ---LKLSGYIGAKDFRLLESIY-----PSLTDVVEYGFITFFAKPLFLLLDWLYKFCGNW 339 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI+L T+ V+++ FPL K VS +K+I PK+ E++EK+K PQ LQ M++LYK Sbjct: 340 GWAIVLLTLVVRIILFPLTYKGMVSMQKLKDIAPKMKEIQEKYKG-DPQKLQVHMMELYK 398 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 H NP+ GC P+LLQ+P+FFAIY+V+ ++E++ A + WI DL+ DP Sbjct: 399 KHGANPMGGCLPLLLQMPIFFAIYRVLYNAIELKGADWILWINDLSVMDPYF-------- 450 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539 I PI+M SMF+Q ++P D Q + ++P++F F +FP+GL+ Sbjct: 451 -----------ILPILMGASMFLQQHLTPTTFTDPMQEKVFKFLPLIFTFFFVTFPSGLV 499 Query: 540 IYWSWSNVISIVQQAVIMK 558 +YW SNV SI QQ I K Sbjct: 500 LYWFVSNVFSIAQQLFINK 518 >gi|295698381|ref|YP_003603036.1| inner membrane protein OxaA [Candidatus Riesia pediculicola USDA] gi|291157428|gb|ADD79873.1| inner membrane protein OxaA [Candidatus Riesia pediculicola USDA] Length = 547 Score = 266 bits (680), Expect = 6e-69, Method: Composition-based stats. Identities = 123/580 (21%), Positives = 255/580 (43%), Gaps = 58/580 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N + IAL WQ + E+ N ++ P + Y + Sbjct: 1 MYLQKNL-LFIALLFFSSLIWQIWKNDKVQEKTLI---NAESNDIPLDRSSKYQIQKGEY 56 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + +++K ++ KG ++L Y ++S+ P + + Y Sbjct: 57 NSF-------IKVKTNVFEILLDKKGGDIHRVDLIQYKKKLNSDEPFRII--DTKEDFVY 107 Query: 121 FAELDYVSTANNIELPNSNTVWNLISG-------KILTPTTPIKLVFKNANNILFERTIS 173 + ++ + +N + S + L+F + NN+++E+ Sbjct: 108 QVQSGFIGKNGPDNISYNNGIRPTYSSRRDYFIIDNEKEYIKVPLIFVSKNNVIYEKIYV 167 Query: 174 LD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV-------QEGFIAVLG 225 + Y ++ +TNNS + I S G++ ++ ++ N G Sbjct: 168 FKRDQYDIEVEYRITNNSAENIEISIFGQLKQNVEESYDNRLENRNFSVRSYRGAAYSSD 227 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + D+ K + H + W+ + +Y+AS +I + + + ++ Sbjct: 228 QTKYKKCTFKDLMKKKLE-IHTKSGWIAMLQQYFASAWILND--QYINSVYSINFQGKSA 284 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + +I I + + L+ G + + ++ +D+GW +FI++P Sbjct: 285 IIGYRTPKILIKSNERFQYISKLWIGPELQTEMSKVAN-----YLDLTVDYGWLWFISQP 339 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + Y VGN+G +I++ T V+ L +PL K QY+S A ++ +QPK++E++ + + Sbjct: 340 LFQLLQFIYRFVGNWGFSIVIITFIVRGLMYPLTKAQYISMAKIRLLQPKLEEIKNRIGE 399 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 ++ + +++LY+ +NPL GC P+++Q+P+F A+Y ++ S+E+R APF WI+DL Sbjct: 400 DKNKM-SQEVVELYRKEKVNPLGGCLPLIIQMPIFLALYYMLIGSVELRQAPFIYWIQDL 458 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMILNWM 523 ++ DP P++M +M+ KMSP + I+N++ Sbjct: 459 SSKDPYYF-------------------LPLLMGCTMYFIQKMSPNTNTSELSREKIINYI 499 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P+ F FP+GL++Y+ SN+++I+QQ I + + Sbjct: 500 PIFFTIFFLWFPSGLVLYYIISNLVTIIQQKAIYRFLKKK 539 >gi|116620215|ref|YP_822371.1| protein translocase subunit yidC [Candidatus Solibacter usitatus Ellin6076] gi|116223377|gb|ABJ82086.1| protein translocase subunit yidC [Candidatus Solibacter usitatus Ellin6076] Length = 579 Score = 266 bits (679), Expect = 8e-69, Method: Composition-based stats. Identities = 129/572 (22%), Positives = 227/572 (39%), Gaps = 56/572 (9%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP------------NQVDNSY 53 +A L +++ + P+ + P Sbjct: 25 RLLLAFILMGAVMFLTPYIFPTPKPPAKKDAATTAAVTPSPAAADASNPAATAPSGPAVV 84 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A + A P + ++ +GA L+ Y ++S + L++ Sbjct: 85 EAGSLPADATQQKPEPAFVINTDLYRVVLSNQGATVRSWQLKRYK---GNDSKPLDLVNS 141 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + + F+ + P SN W + + + + ++ + Sbjct: 142 VSGLDFPFSLYF------PGQKPASNVNWTWYKQTGDADGLGVTYEYSDGHVVVRKVVRF 195 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 + YL + VT + T TN Q L LVEQ Sbjct: 196 QKDSYLSMVSCEVTLDGKPIPHLLQWR--GGFGDLTLTNAAAGQRTLYFDLTTNKLVEQN 253 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + S+ GI+D Y+A+VF+P +D ++ Sbjct: 254 -PKAAAKGPITSEGTFSFAGIADTYFAAVFLPEGNGRMQQVT--FADTVRTPTSETPLPL 310 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + G LF G K+ + P+ E ++D+GW +AKP+F++++Y Sbjct: 311 SGVAVGDGPPIRFELFVGPKDVDMLRKIN-----PKLEQVVDFGWLSVLAKPLFLIVNYV 365 Query: 354 YN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ-----SP 407 + LV NFG AI+L T+ + + FPL S M+ ++P++D + K+K Sbjct: 366 NDTLVHNFGWAIVLVTIAINFILFPLKLSNMKSMRKMQALKPQVDAINAKYKNVGLRDPR 425 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + + LYK H +NP+ GC P++LQIP FFA YKV ++S+EMR AP+ W+ DL+ Sbjct: 426 AADKNQETMDLYKKHGVNPMGGCLPMVLQIPFFFAFYKVFTVSVEMRGAPW-LWVSDLSQ 484 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVV 526 + + + I P++M S F+ +M+P PA D Q ++ +MP+V Sbjct: 485 PET-----------------LPIKILPLVMIASQFVMQRMTPQPAGDPAQQKMMMFMPLV 527 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F F +FP+GL++Y+ SN++S+ QQ K Sbjct: 528 FGFMFYNFPSGLVLYYLTSNLVSMGQQWFFNK 559 >gi|145220572|ref|YP_001131281.1| protein translocase subunit yidC [Prosthecochloris vibrioformis DSM 265] gi|189036356|sp|A4SH20|OXAA_PROVI RecName: Full=Inner membrane protein oxaA gi|145206736|gb|ABP37779.1| protein translocase subunit yidC [Chlorobium phaeovibrioides DSM 265] Length = 580 Score = 266 bits (678), Expect = 1e-68, Method: Composition-based stats. Identities = 114/569 (20%), Positives = 225/569 (39%), Gaps = 29/569 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N +AL +I+ W F + + K +V+Q N D Sbjct: 1 MD--RNSVTGLALIALIMIVWLQFMSPDKKPVIRESAKKAASVEQVNVPLKPAPVSASDA 58 Query: 61 ----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + A + ++ ++N +I+ KGA L L+ + + V L+S Sbjct: 59 FGAFASAANGKARKMVVENDLFRATISSKGATLTSLVLKKH---LDGALQPVQLVSNRAD 115 Query: 117 ---KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + ++ + + + +L NIL + + Sbjct: 116 GALSLLFLTREGRKIDTRDLYFTGGSVDTLHTVTGKESYSVRYRLNVSKNRNILITYSFT 175 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 D + + V +S SLV+ Sbjct: 176 GDSYRVGYDVQLNGFSSALAGNEYQLQWDGGLGYTEKNREDEAHNALAGAYLGGSLVKLD 235 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + ++ W+ + +KY+ + IP+ T G+ S Sbjct: 236 AAKDNQAYREEQSGEAKWVAVRNKYFVAALIPAGPTGGFYLDGSKKAGNEFENYLASLKM 295 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMFML 349 + G S+ + L+ G ++ + + + E ++D+GW + F + + Sbjct: 296 EVPVSGASLDNSFSLYMGPLDYDIVRAQKAE-----LEKIMDFGWDWLTRPFAEYIILPV 350 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 S+ + N+G+ I++ +KL+ +PL+ S M +QP + EL++K+K +P + Sbjct: 351 FSWMNKFIHNYGLIIIIFAFLIKLVTYPLSLASTKSMKKMAALQPMLKELQDKYKDNPAK 410 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + ++YK +NPL GC P++LQ+P+ FA++ V S+E+R + W DL+ D Sbjct: 411 LQS-ELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIELRQ-HGFLWAHDLSVPD 468 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFV 528 +I L +P Y H+ + PI+M+ ++F+Q K++P Q I+ +M P + + Sbjct: 469 --SILNLGFTIPMYG---DHIALMPILMAGTVFVQQKITPTAQTNDQMKIMLYMFPAMML 523 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ P+GL +Y+ NV S+ QQ I Sbjct: 524 LFFNNMPSGLGLYYLMFNVFSVAQQFYIN 552 >gi|163751385|ref|ZP_02158610.1| inner membrane protein, 60 kDa [Shewanella benthica KT99] gi|161328688|gb|EDP99836.1| inner membrane protein, 60 kDa [Shewanella benthica KT99] Length = 437 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 120/455 (26%), Positives = 200/455 (43%), Gaps = 34/455 (7%) Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL-----VFKNAN 164 +L Y A+ + ++ S L + Sbjct: 1 MLLEQTQDINYIAQSGLIGRDGIDSSVKGRAHFDSASRDYTMAAGQETLEVALTYVADNG 60 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + I + + + N + Q++ G+I ++ ++ A Sbjct: 61 ANYTKMFIFHRGKFNIDVDYVIDNTTDKQLQVQMYGQIKHSIKESESSMMMPTYRGAAFS 120 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 E+ D + W + Y+ S +IP + + G A Sbjct: 121 TADIRYEKYSFDDMADKNLDNKTLGGWAAMLQHYFVSAWIPPADDQNIIFSSLSAGGQAN 180 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 F I PG + T + G K+ + +++D+G+ ++IA Sbjct: 181 --IGFRGAIYDIAPGATQTIKAQFYVGPKDQKELSAISDS-----LNLVVDYGFLWWIAV 233 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+ L+ +FY++VGN+G AI+L T+ V+ + FPL K QY S A M+++QPK+ E++E+F Sbjct: 234 PISKLLMFFYSIVGNWGGAIILITLTVRGMLFPLTKAQYTSMAKMRSLQPKLAEMKERFG 293 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + +AM++LYK +NP+ GC PILLQ+P+F A+Y V+ S+E+RHAPF WI D Sbjct: 294 D-DRQKMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLMESVELRHAPFMLWIID 352 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNW 522 L+ DP + P++M +SMF+ +M P P D Q ++ W Sbjct: 353 LSVQDPYY-------------------VMPVLMGISMFVMQRMQPMAPTMDPMQQKMMQW 393 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 MPVVF FPAGL++YW N+++I QQ +I Sbjct: 394 MPVVFTVFFLWFPAGLVLYWLVGNIVAITQQKIIY 428 >gi|154174780|ref|YP_001408435.1| putative inner membrane protein translocase component YidC [Campylobacter curvus 525.92] gi|112802923|gb|EAU00267.1| inner membrane protein OxaA [Campylobacter curvus 525.92] Length = 518 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 127/573 (22%), Positives = 240/573 (41%), Gaps = 66/573 (11%) Query: 1 MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M++ +A LS + A+ F++ + N N+ N +S +A + Sbjct: 1 MDKLSTQKRVLIATLLSFLFFIAYDYFFIPKSMPIEQNRSVNVAQNSS-NATPSSQSANV 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNL--RGYHLDVSSNSPIVTLLSPSN 115 + + + ++K + I+ G + L + Y N +T +SP Sbjct: 60 TANTDPSQNTKILAKIKGQNYEAQIDELG-RISKFYLTEKKY-ETADGNKTELTGISP-- 115 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISL 174 L+ + I + ++ + + + + + I+ Sbjct: 116 ------LPLEMRFSDAAINDQAFRVSYTADISELDASSGAKTINLTQNLDGLSVTKKITF 169 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 +++ ++ N +P + +++ + + DK + + Sbjct: 170 YPDGRYEVEVNLSKNVE-------YFITPGFRPNISVDSYTIHGALLMHADDKLSILEDD 222 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 S+ SD+Y+ + F + + Sbjct: 223 DLDGTEKFSDIT----VAAASDRYY------------TALFYSFGKPLDVVMSTDAKKNA 266 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 I ++ + G K+ + + PR +I++GWF FIAKPMF + + + Sbjct: 267 IIFVKQNGNFKTSGYIGPKDHKILSSMD-----PRLTDIIEYGWFTFIAKPMFAFLDFLH 321 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +GN+G AI++ T+ ++++ FPL K +S +K + PK+ E++ K+K PQ L Sbjct: 322 KYIGNWGWAIVVLTLVIRIILFPLTYKGMLSMNKLKELAPKVKEIQAKYKG-DPQKLNTH 380 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 M++LYK + NP+ GC PILLQIPVFFAIY+V+ ++E++ AP+ WI DL+A DP Sbjct: 381 MMELYKKNGANPMGGCLPILLQIPVFFAIYRVLLNAIELKGAPWILWIHDLSAMDPFF-- 438 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSS 533 I PI+M +MF+Q +++P D Q I+ ++P++F F + Sbjct: 439 -----------------ILPILMGATMFLQQRLTPTTFTDPMQEKIMKYLPLIFTFFFVT 481 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 FPAGL +YW +NV S++QQ + K+ + Sbjct: 482 FPAGLTLYWFVNNVCSVIQQIFVNKLFEKHKKV 514 >gi|118474690|ref|YP_891743.1| putative inner membrane protein translocase component YidC [Campylobacter fetus subsp. fetus 82-40] gi|118413916|gb|ABK82336.1| inner membrane protein, 60 kDa [Campylobacter fetus subsp. fetus 82-40] Length = 531 Score = 264 bits (674), Expect = 3e-68, Method: Composition-based stats. Identities = 130/568 (22%), Positives = 243/568 (42%), Gaps = 60/568 (10%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV----DNSYAAVLID 59 +A +S++ + F++ R ++N + +S A Sbjct: 8 QKRLLIATVISILFFITYDYFFIPKRTVDINQTASYAEQNSSSANSAPASQDSINASDSA 67 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + V++ + +I+ G + L N ++L+S +++ Sbjct: 68 APVTSNASKNIVQISGKTYNATIDELG-RISSFVLNESKFK-DENDKQISLVSLNHSPLP 125 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHY 178 L+ + ++ + + I +P +V A N + +TI+ Sbjct: 126 ----LEIRFSNKDLNEEAFKVAYTSSAETIDVTKSPANVVLTQALNGVTLTKTITFYPDG 181 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 + + ++ N +P + + V + + + + Sbjct: 182 AYDLKVKLSKNED-------YFITPGFRPNVVVDGYTVHGTLMRKSDGS----LEIIEDK 230 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 K+ L SD+Y+ + F + Y SA Sbjct: 231 KAKGDERFTGVDILANSDRYY------------TTLFYEVDKTLDVYIQNDSAENTLSFV 278 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 S + + + G K+ + + P +I++GWF FIAKPMF+L+S+ +N +G Sbjct: 279 KSSGSFSTKGYIGPKDHKILKSID-----PNLVDVIEYGWFTFIAKPMFLLLSWLHNYIG 333 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G AI+ T+ ++++ FPL K VS +K++ PK+ E++ K+K P + L +++L Sbjct: 334 NWGFAIVALTIVIRIVLFPLTYKGMVSMNKLKDLAPKMKEIQAKYKGDPSK-LNAHVMEL 392 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK + NP+ GC PIL+QIP+FFAIY+V+ ++E++ AP+ WIKDLA DP Sbjct: 393 YKKNGANPMGGCLPILIQIPIFFAIYRVLLNAIELKGAPWIFWIKDLAIMDPYF------ 446 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 I P++M +MFIQ K++P D Q I+ ++P++F F +FPAG Sbjct: 447 -------------ILPVLMGATMFIQQKITPANFTDPMQEKIMKFLPLIFTFFFVTFPAG 493 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIG 565 L +YW +N+ S+ QQ V+ K+ + Sbjct: 494 LTLYWFINNLCSVAQQLVVNKIFKKQKE 521 >gi|152990628|ref|YP_001356350.1| inner membrane protein translocase component YidC [Nitratiruptor sp. SB155-2] gi|151422489|dbj|BAF69993.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 528 Score = 263 bits (671), Expect = 6e-68, Method: Composition-based stats. Identities = 142/572 (24%), Positives = 257/572 (44%), Gaps = 65/572 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN----QVDNSYAAV 56 M N +A +S+++ +A+ F++ + ++ + +TV Q + NS + Sbjct: 5 MSTNQRVLLATIISLVVFFAYDFFFMPQQPKQPLENNASTKTVAQATTAAAPMQNSGQNM 64 Query: 57 LIDDRAQALSMSPR-VELKNPSLIGSINLKGAQFDDLNL--RGYHLDVSSNSPIVTLLSP 113 ++ S + V++ + I+ G + + L + Y + S + L Sbjct: 65 KAPLGKESDKPSQQLVKITSAKFDLFIDNLG-RVSQVILEEKKYKNESGSQ---IKLFD- 119 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTI 172 +N L+ + N + T + K ++ + P + K + I Sbjct: 120 ---QNRLPKPLEIRFSDNALNEKAFKTPYRYDGPKEISLSGPTTITLKQDLGVTEVTKKI 176 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 ++ ++ T+T +S P ++P + + + I ++ Sbjct: 177 TVYPDGHYEASITLTKSS-------PYYISPGYRPDVRVDGYTLHGALI----KEADDTI 225 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + + + + D+Y+A+ F L +G +K S Sbjct: 226 TIIEDGDAKGTEVFKKAKIAAAFDRYYAT------------LFYDLKNGLNVVVSKDSEE 273 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + S + G KE+ T+ P +I++G+F FIAKPMF + Sbjct: 274 NPILFVQGSQNFHVDGYFGPKEYETLKAIN-----PELTDVIEYGFFTFIAKPMFKALLA 328 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 Y+L+GN+G AI++ T+ ++++ FPL K +S +K++ PKI EL++K+K PQ L Sbjct: 329 LYHLIGNWGWAIVVLTIIIRIILFPLTLKGMLSMQKLKDLAPKIKELQQKYKG-DPQKLN 387 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 M+QLYK H NP+ GC P+LLQIPVFFAIY+V+ ++E++ AP+ WI DL++ DP Sbjct: 388 AHMMQLYKKHGANPMGGCLPMLLQIPVFFAIYRVLLNAIELKGAPWILWITDLSSKDPYF 447 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I P++M +M+I K++P D Q I W+P+VF F Sbjct: 448 -------------------ILPVLMGATMYIHQKITPTTITDPMQKKIFEWLPIVFTFFF 488 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +FPAGL +YW +N++SI+QQ ++ K+ A Sbjct: 489 LTFPAGLTLYWFVNNILSIIQQLIVNKIFEAR 520 >gi|256548861|gb|ACU82912.1| 60 kD inner-membrane protein [Buchnera aphidicola (Acyrthosiphon kondoi)] Length = 537 Score = 263 bits (670), Expect = 9e-68, Method: Composition-based stats. Identities = 132/520 (25%), Positives = 236/520 (45%), Gaps = 44/520 (8%) Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 I+ A + ++ +KN + +N+ G ++ +L Y + S+ P L + Sbjct: 45 INTNKNAKKNTQQIFIKNNVINLVVNMYGGDIEEASLLSYKDKLYSSKPFKLL--ETAPD 102 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK-----LVFKNANNILFERTI 172 Y A+ + ++ K + + + N + + +T Sbjct: 103 FIYQAQSGLIGKDGPDSSEKNSRPLYSSEKNFFELKREKKELRVPIKWVSQNGVTYTKTF 162 Query: 173 SLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVL 224 L + Y +I + N S + ++ + G+I + + G Sbjct: 163 ILKPNSYDIQIEYDIYNPSKEILKMNMFGQIKQTVNLPKKRNIYSGNFALQTFRGAAYSS 222 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 D + K+ I + + N W+ + +Y+A +IP + H Sbjct: 223 SDNKYEKYKFDMISDNKNLHVITENGWIAMLQQYFAVAWIPQNLGQN--IIYTSNLDHGI 280 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + ++ I +LP + L+ G + + +L P ++ +D+GW +F+++ Sbjct: 281 VAIGYKSSLINVLPHSRSIIKSKLWIGPEIQKEM-----NLVAPNLDLTVDYGWLWFLSQ 335 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 P+F L++ +N+VGN+G +I+L T +K + +PL K QYVS M+ +QPKI E++EKF Sbjct: 336 PLFKLLTILHNVVGNWGFSIILITFIMKAVTYPLTKAQYVSMLKMRALQPKIKEIKEKFS 395 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + + MI LYK INPL G PI +Q+P+F ++Y ++ S+E+RHAPF WI D Sbjct: 396 NDK-QRISQEMIVLYKKEKINPLTGFLPIFIQMPIFLSLYYMLIGSVELRHAPFLLWIHD 454 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNW 522 L++ DP + PIIM L+MF K S +D Q I+N+ Sbjct: 455 LSSQDPYY-------------------VLPIIMGLTMFFIQKTSSANHVSDPFQKKIMNF 495 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MPV+F FP+GL++Y+ SN+++I+QQ I+ G Sbjct: 496 MPVIFTAFFLWFPSGLVLYYIISNLVTIIQQKFILSNLGK 535 >gi|319957040|ref|YP_004168303.1| membrane protein insertase, yidc/oxa1 family [Nitratifractor salsuginis DSM 16511] gi|319419444|gb|ADV46554.1| membrane protein insertase, YidC/Oxa1 family [Nitratifractor salsuginis DSM 16511] Length = 535 Score = 262 bits (669), Expect = 1e-67, Method: Composition-based stats. Identities = 129/575 (22%), Positives = 228/575 (39%), Gaps = 71/575 (12%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP--------------NQV 49 N +A+ LS +I+ + + N Sbjct: 2 NKRLMIALVLSFVILIGFSYLMPQHKATVDQNGTAAPSAQAAQHSQAPQAPAPAASGTAP 61 Query: 50 DNSYAAVLIDDRAQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 + S A +S+ + ++ + G + L+ + + Sbjct: 62 EASAGTAPAAQTAAPVSVDKVISTVETKKYTLKFDQFG-RIVSAVLKE-PKYRQDDGKPL 119 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNIL 167 L+ P T+ L+ I ++ +G + + L + Sbjct: 120 DLIDPKRTR-----PLEVRFKDPAINKAAFEVPYSASAGTLDARSGKAVLTLTQKLPQLT 174 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 +T++ + + ++ R P H+P+ + + + G + Sbjct: 175 LTKTLTFYPEGHYDLKVELS-------RKVPYFITTGHRPEADHSRYMIVRGVLVRNSKG 227 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + + + + L D+Y+ + + F Sbjct: 228 VITTVEDGK---ADQTVKIPDATILSSFDRYY-ASLFFDFKKPFSVIITPDEKKDPLPFV 283 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + + G KE+ + PR I++GWF F+AKP F Sbjct: 284 VTDS-----------SLQLHGYVGPKEWKLFESLD-----PRLTDAIEFGWFTFLAKPFF 327 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +M YN VGN+G AI+L T+ VKL+ FPL+ K +S +K++ PK+ E++EK+K P Sbjct: 328 RIMLAIYNFVGNWGWAIVLFTLLVKLVLFPLSYKGLLSMQKLKDLAPKMKEIKEKYKSDP 387 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 ++ Q+ M+ LYK H NP+ GC P+LLQIPVFFA+Y+V+ + E++ AP+ WI DL+ Sbjct: 388 AKMNQQ-MMALYKKHGANPMGGCLPMLLQIPVFFALYRVLLNADELQGAPWILWIHDLSR 446 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVV 526 DP I PI+M ++MFIQ ++P D Q I W PV+ Sbjct: 447 QDPYF-------------------ILPILMGVTMFIQQHITPNTMTDPMQQKIFKWFPVI 487 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 F +FPAGL++YW +N++SI QQ I +++ Sbjct: 488 MTFFFLTFPAGLVLYWLTNNILSIAQQYYINRVYD 522 >gi|114778885|ref|ZP_01453682.1| 60 kDa inner membrane insertion protein [Mariprofundus ferrooxydans PV-1] gi|114550854|gb|EAU53420.1| 60 kDa inner membrane insertion protein [Mariprofundus ferrooxydans PV-1] Length = 435 Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats. Identities = 134/477 (28%), Positives = 227/477 (47%), Gaps = 46/477 (9%) Query: 87 AQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLIS 146 F + L+ YH+ + + V++LS ++ + + + + + + +++ Sbjct: 5 GWFTEAELKQYHVSIEPGAANVSVLSMTDEGRSVYV-------NSGVMNRSIQKPFTVLN 57 Query: 147 GKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK 206 T T L + I + + Y+ I D + + +I +++ Sbjct: 58 KSANTMTLQATL---DNGLIWQRKITLAQDSYIVDIEDRILGGAGQKIYR----QVVERD 110 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 P NTF G A+L L E Y D++ SS+ W I ++Y+ + I + Sbjct: 111 PDKKLNTFYEHMGPTALLN-GKLQEPDYKDLDSSSV-RMMAVGGWTAIMNRYFIAALISN 168 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 E + FK + L GK + +F G K + + Sbjct: 169 PEQDYPYYFKGDGRSYQAGVID-----SGTLDGKDNLFHSRMFLGPKSLTVLKKAGE--- 220 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 + I++GWF FI+KPM + + Y VGNFG I+L + +K+LFF +K Y S Sbjct: 221 --GLDRSINYGWFAFISKPMHSFLLWLYTYVGNFGFCIILLVLSIKILFFWPTQKSYESM 278 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A M+ +QP++ ++E + Q + + M+ LYK H +NP+ GC PI++QIPVFFA+YKV Sbjct: 279 AAMRKLQPEMARMKELYGD-DRQKMSQEMMALYKKHKVNPMGGCLPIIIQIPVFFALYKV 337 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + +S+EMR APF GWI D++ DP + P++M +SMF+Q + Sbjct: 338 LLMSIEMRQAPFIGWIHDMSVQDPYF-------------------VLPVLMGISMFVQQR 378 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++P P D QA ++ ++P VF FPAGL++YW +N +SI+QQ ++MK E Sbjct: 379 LNPTPPDPMQAKVMQFLPPVFTVLFLFFPAGLVLYWVVNNTLSILQQKLVMKRMNVE 435 >gi|110598560|ref|ZP_01386828.1| 60 kDa inner membrane insertion protein [Chlorobium ferrooxidans DSM 13031] gi|110339794|gb|EAT58301.1| 60 kDa inner membrane insertion protein [Chlorobium ferrooxidans DSM 13031] Length = 583 Score = 260 bits (663), Expect = 5e-67, Method: Composition-based stats. Identities = 119/577 (20%), Positives = 232/577 (40%), Gaps = 35/577 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPR-----IEEMNNERKNIQTVKQPNQVDNSYAA 55 M+ +AL +I++ W F + E + E+ + Q + P S Sbjct: 1 MD--RKSLTGLALIGLIMFVWLQFMSPEKKLLKSPEAVKTEQASPQALSSPVAAAPSADT 58 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + A A V++ N +++ KGA L L+ + ++ L+S N Sbjct: 59 FGVFATA-AGGREQLVKVDNDLFRATLSSKGATLKSLVLKKH---LNGERKPFDLVS--N 112 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVW-NLISGKILTPTTPIKLVFKNANNILFERTIS- 173 T+N + L I+ + L S + ++ + + I+ Sbjct: 113 TRNGALSLLFLTREGKKIDTRDLYFSTVTLDSVRAISGKQSYAVRYHLDIAPAQAIDITY 172 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSLV 230 L +K+ V ++ Q SLV Sbjct: 173 LFSGDSYKVGYDVKLTGFASELAGNEYQLQWDGGLGYSEKDRKDESQSVLAGAYLGGSLV 232 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + ++ W+ + +KY+ + IPS+ T + G+ + Sbjct: 233 KLDAAKENETYREEQSGEAKWVAVRNKYFVAALIPSRRTEGIHLDGKRTAGNEFENYTAA 292 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPM 346 G L+ G ++ + E ++D+GW + F + Sbjct: 293 LKMGVPSTGTVSDDKFSLYLGPLDYNIVKSQHA-----GLEKIMDFGWDWLTRPFAEFII 347 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 + S+ V N+G+ I++ +KL+ +PL+ S M +QP + EL+EK+K + Sbjct: 348 LPVFSWMNTFVSNYGLIIIIFAFLIKLVTYPLSMASTKSMKKMSALQPVLKELQEKYKDN 407 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 P ++ + ++YK +NP+ GC P++LQ+P+ FA++ V S+E+R + W KDL+ Sbjct: 408 PAKLQS-ELGRIYKEAGVNPIGGCLPVVLQMPLLFAMFYVFRSSIELRQHS-FLWAKDLS 465 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PV 525 D +I +P Y H+ ++PI+M++++F+Q K++P Q ++ +M P Sbjct: 466 VPD--SILDFGFSIPMYGN---HIAVFPILMAVTVFMQQKITPTTQSNDQMKVMMYMFPA 520 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + + ++ PAGL +Y+ N+ S+ QQ I K A Sbjct: 521 MMLLFFNNMPAGLGLYYLMFNIFSVAQQFYINKTTTA 557 >gi|78189983|ref|YP_380321.1| Oxa1/60 kDa IMP family protein [Chlorobium chlorochromatii CaD3] gi|123579125|sp|Q3ANZ7|OXAA_CHLCH RecName: Full=Inner membrane protein oxaA gi|78172182|gb|ABB29278.1| protein translocase subunit yidC [Chlorobium chlorochromatii CaD3] Length = 584 Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats. Identities = 114/584 (19%), Positives = 219/584 (37%), Gaps = 30/584 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N +AL +I+ W F + + + + + A D Sbjct: 1 MD--KNSVTGLALIAVIMLVWLQFMTPAQKVQPPQQVATTEQQVASASLPLPAALSPSTD 58 Query: 61 R----AQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 A A S +V + +N +++ KGA L L+ + P L N Sbjct: 59 TFGLFATASQGSEQVTVVENDLFRATLSSKGATLKSLVLKKHLD--GHLQPFDLLGKQKN 116 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + + +L N ++ A E Sbjct: 117 GHLSLLFLTKDGKRIDTRDLYFRNVTLETKRTISGQERYTVRYRLDVAPQKAIEIAYLFS 176 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSLVEQ 232 + I V ++ Q SLV+ Sbjct: 177 GES-YAIDYDVKLIGFGNDIAGNEYQVQWDGGLAYTEKNREEESQNALAGAYLGGSLVKL 235 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + ++ +W+G+ +KY+ + IP +++ G+ + Sbjct: 236 DAAKEKEVFREEQSGEATWVGVRNKYFTAALIPQSKSNGIYLEGKREAGNHFENYLAALK 295 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMFM 348 + T ++ G ++ T+ E ++D+GW + F + Sbjct: 296 MSLPASATEVHNTFTMYVGPLDYNTVKAQGV-----GLEKIMDFGWDWLTRPFAEWMILP 350 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 + ++ + N+GI I++ VKL+ +PL+ S M +QP + EL+ K+K +P Sbjct: 351 VFNWLNGFISNYGIIIIIFAFLVKLVTYPLSMASTKSMKKMAALQPVLQELQVKYKDNPA 410 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 ++ + ++Y+ +NP+ GC P LLQ+P+ FA++ V S+++R + W KDL+ Sbjct: 411 KMQS-ELSRIYREAGVNPVGGCLPTLLQMPLLFAMFYVFRSSIQLRQ-HGFLWAKDLSVP 468 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVF 527 D +IF +P Y H+ +PI+M+ ++++Q K++P Q I+ PV+ Sbjct: 469 D--SIFDFGFAIPLYG---DHIAFFPILMAGTVYLQQKITPTAQPNEQMKIMLVLFPVMM 523 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 +F ++ PAGL +Y+ N+ S+ QQ I K A+ L Sbjct: 524 LFFFNNMPAGLGLYYLMFNIFSVAQQFYINKTTTADDMPKVNLA 567 >gi|242310495|ref|ZP_04809650.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239522893|gb|EEQ62759.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 538 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 129/580 (22%), Positives = 242/580 (41%), Gaps = 54/580 (9%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 +A+ L++ + FY P+ +NIQT Q + + + + Sbjct: 11 QTRIIIAVVLALAFFVPYSYFYS-PKENATAKPSQNIQTPSQEQTTPQASIQNVSNTQNS 69 Query: 64 ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE 123 S +K + I+ G + + L+ ++ + L S Sbjct: 70 TDSQEIIATIKAKNFEYKIDRLG-RITQVLLKE--EKYHKDAKDLELFSTDIANQNNPKT 126 Query: 124 LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHYLFKI 182 L+ + + + +T + I P + NI E+ ++ + ++I Sbjct: 127 LEIRFSDSMLNQQAFSTPYKASQSDITIQDKPQSITLTQKLQNITIEKILTFYPNGYYEI 186 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 V N + + N V +G I D ++ + D +S Sbjct: 187 KINVPQN--------YTYFLSPGMRPSVENDAYVFKGVIIKEQDNTITTIEDGD---AST 235 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 N ++S + D+Y+ + F ++ + + Sbjct: 236 QNNFTNSSIIAAVDRYY------------TTLFFSKTNNLNISILNNAQENPMPFISANG 283 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 F + G K++ + + + ++++G F AKP+F+L+ Y+L GN+G Sbjct: 284 NIELFGYIGPKDYRLLESIDTN-----LTDVVEYGMITFFAKPLFLLLETLYDLCGNWGW 338 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L T+ V+++ +PL K VS +K++ PK+ E+++K+K PQ LQ M+ LYK H Sbjct: 339 AIILLTLIVRIILYPLTYKGMVSMQKLKDLAPKMKEIQQKYKG-EPQKLQAHMMDLYKKH 397 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 NP+ GC P+LLQ+PVFFAIY+V+ ++E++ A + WI+DL+ DP Sbjct: 398 GANPMGGCLPLLLQMPVFFAIYRVLYNAIELKGAAWLLWIQDLSVMDPYF---------- 447 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 + PI+M ++M++Q ++P D Q I ++P++F +FP+GL++Y Sbjct: 448 ---------VLPILMGITMYLQQHLTPATFNDPIQEKIFKFLPLIFTIFFVTFPSGLVLY 498 Query: 542 WSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 W +N+ SI+QQ +I K + SQ Sbjct: 499 WFVNNIFSILQQLIINKAMERKKAREIAEHKEHKHQKASQ 538 >gi|330721634|gb|EGG99650.1| Inner membrane protein translocase component YidC2C long form [gamma proteobacterium IMCC2047] Length = 345 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 117/355 (32%), Positives = 187/355 (52%), Gaps = 28/355 (7%) Query: 205 HKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 QT + G + + V+ + DI + W+ I Y+ SV++ Sbjct: 8 DPSQTTSMGMASFLGAATQTVEDNYVKVDFDDIADEPFKE-KNTGGWVAILQHYFVSVWV 66 Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 P+K+ + + S G A + + PG+ T L+AG K + Sbjct: 67 PNKDQQHLYEVRKNSQGEN--IAGLVSPATIVHPGQQATVGAQLYAGPKIQDRLEQIS-- 122 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 P E+ ID+G+ +FI +P+F L+S+F++ +GN+G AI+ TT+ +KL FF L+ Y Sbjct: 123 ---PSLELTIDYGFLFFIGQPLFWLLSFFHSFLGNWGWAIIFTTLVIKLAFFHLSATSYK 179 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S ANM+ + P++ ++E+ S Q + AM++LYK INPL GC PIL+Q+PVF A+Y Sbjct: 180 SMANMRRVGPEMARIKEQH-GSDRQKMSAAMMELYKKEKINPLGGCLPILVQMPVFIALY 238 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 V+ S+E+R APF WI+DLA DP I PI+M ++M+ Q Sbjct: 239 WVLMESVELRQAPFMFWIEDLAVKDPLF-------------------ILPILMGITMYGQ 279 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++P P D QA ++ +P++F F FP+GL++YW +N++SI QQ VI + Sbjct: 280 QLLNPTPPDPTQAKVMKMLPIMFTFFFLWFPSGLVLYWVANNILSIAQQWVITRK 334 >gi|268680016|ref|YP_003304447.1| membrane protein insertase, YidC/Oxa1 family [Sulfurospirillum deleyianum DSM 6946] gi|268618047|gb|ACZ12412.1| membrane protein insertase, YidC/Oxa1 family [Sulfurospirillum deleyianum DSM 6946] Length = 532 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 126/571 (22%), Positives = 233/571 (40%), Gaps = 65/571 (11%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 +A LS + + +F++ P+ + +I P S +Q + Sbjct: 10 RVIIATVLSFLFFAFYDHFFI-PKNTPLAETNSSITEQATPASSATSAPEFKEATSSQEI 68 Query: 66 SMSPRV----------ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + +P V ++K S I+ G + L + L+ S Sbjct: 69 AQTPLVGKESQNEVIVKIKAASYEMHIDRLG-RISKFYLNESKYKDDKGE-RIQLIDASQ 126 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + ++ L + + +++ T + + I ++I+ Sbjct: 127 GVLPLEIRFSDKAVNSDAFLMSYSADKSVVEVSETGSTVDLT---QKLGEITLTKSITFF 183 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + + ++N +P A +++ I K+ + Sbjct: 184 PSGKYDLHVKLSNAKD-------YFISPGFRPGAAIDSYTFHGALI----KKADDTVQTI 232 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 + + +DKY+ + F LS G + Sbjct: 233 ADGDAKGDEKFSNARIAAAADKYY------------TTFFYELSSGLETVILPSKESNPL 280 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + + + G KE+ + P ++++G+F FIAKP+F L+S+ + Sbjct: 281 LFVKGNDDFKLSGYVGPKEYVKLKEIH-----PGLTDVVEYGFFTFIAKPLFTLLSFLHG 335 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 + GN+G AI+ T+ V+L+ +PL K VS +K + PK+ EL++K+ Q L M Sbjct: 336 IFGNWGWAIVAMTIIVRLVLYPLTYKGMVSMNKLKELAPKVKELQKKYGDDK-QKLNIHM 394 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LYK H NP+ GC PILLQIPVFFA+Y+V+ ++E++ A + W++DLA DP Sbjct: 395 MELYKKHGANPMGGCLPILLQIPVFFAVYRVLQNAIELKGAAWILWVQDLAVMDPYF--- 451 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSF 534 I P++M L+MF+ +++P D Q I+ ++P++F F +F Sbjct: 452 ----------------ILPVLMGLTMFLHQRITPTTFNDPMQEKIMKYLPLIFTFFFVTF 495 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 PAGL +YW +N+ SIVQQ + K+ + Sbjct: 496 PAGLTLYWFTNNLASIVQQFYVNKLFAKKQE 526 >gi|153007343|ref|YP_001381668.1| 60 kDa inner membrane insertion protein [Anaeromyxobacter sp. Fw109-5] gi|166975849|sp|A7HIY8|OXAA_ANADF RecName: Full=Inner membrane protein oxaA gi|152030916|gb|ABS28684.1| 60 kDa inner membrane insertion protein [Anaeromyxobacter sp. Fw109-5] Length = 549 Score = 257 bits (656), Expect = 4e-66, Method: Composition-based stats. Identities = 119/568 (20%), Positives = 208/568 (36%), Gaps = 35/568 (6%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N +A LSV ++ WQ + P+ + + + Sbjct: 4 ENRRVLLATVLSVAVLIVWQFVFPSPKPKPQPPKPPEAAQRAEAPAAPAPGQPAAQAPAP 63 Query: 63 QAL--SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL-LSPSNTKNA 119 + V+L ++ G ++ L+G V + L + Sbjct: 64 AVPQDAPEQLVKLVGDGFEATLTSHGGAVKEIVLQGEKFRRDREGKPVQIDLVRVAKEQP 123 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 Y + E ++ + + +T L E Sbjct: 124 YPLAVVATPELGGAEDAGNDVAARAPMRVVAQDARSATFEGRAGKA-TVRKTYRLTEKAY 182 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--FIAVLGDKSLVEQKYSDI 237 +D Q P T F F+ + +++ Sbjct: 183 ELALDLEVQAPATQGGGIVVLYPGYMPPDTKKGGFFSGPPVEFVRPVCRAGEETERFDVD 242 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 K + + +W G+ Y+ S P++ K G L Sbjct: 243 GKEAQEKLQGTVAWAGMDQGYFVSAVFPAQPAGTCLFAKGPVQGSGL------TALRLPL 296 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 G S +++G K+ + Y ++ + F F A+ + +M + LV Sbjct: 297 DGGSAKFGFTVYSGPKDLDHLRTYGREF-ESAIDYGAMARPFAFFARLLLFVMRWLERLV 355 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+L TV VK+L +PL K S M+ +QP+I++L+ K ++ A +Q Sbjct: 356 ANWGLAIILLTVLVKVLLYPLTAKSMQSMNEMRKLQPEIEKLKAKHGNDREKLNL-ATMQ 414 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LY+ H +NPL GC P+L+Q+P++FA+Y + S+E+ P + WI DL DP Sbjct: 415 LYQQHKVNPLGGCLPMLIQLPIWFALYATLQTSVELYREP-FLWIHDLTVKDPLY----- 468 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMPVVFVFALSSFPA 536 + PI M +S ++ + SP PAD QA ++ +MP F + S PA Sbjct: 469 --------------VLPIAMGVSQYVMQRFSPQPADNAQAKMMLYFMPGFFTLLMLSVPA 514 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEI 564 GL +Y +N++SI QQ +M+ A Sbjct: 515 GLTLYIFVNNLLSIAQQQFMMRRMPAVP 542 >gi|262200044|ref|YP_003271253.1| membrane protein insertase, YidC/Oxa1 family [Haliangium ochraceum DSM 14365] gi|262083391|gb|ACY19360.1| membrane protein insertase, YidC/Oxa1 family [Haliangium ochraceum DSM 14365] Length = 672 Score = 257 bits (655), Expect = 5e-66, Method: Composition-based stats. Identities = 131/616 (21%), Positives = 228/616 (37%), Gaps = 61/616 (9%) Query: 1 MERN-WNYFVAIALSVIIVYAWQNFY-------------------VYPRIEEMNNERKNI 40 ME +A+ L+ +++ W + P + N Sbjct: 1 MEEQSKRLLLAVGLAFVVMMGWTYLFPPEPPPEEVPSAEQSAGSEETPDKPALPKPTLNR 60 Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR--GYH 98 + D + A L + + E + GA L Y Sbjct: 61 ADQTGDSAGDGTGAIGLAEAQPAQRGEEQLYEFRFDKFRAVFTSHGATLKSWELLGDKYR 120 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 ++ + L+ + + L + ++L + T W + T Sbjct: 121 GGEGEDAKPLDLVPLKDE-----SLLPFQLGFEGVDLLPAQTEWRVERQDETTIDFLWSY 175 Query: 159 VFKNANNILFERTIS-----LDEHYLFKIVDTVTN-NSIDQIRFSPRGRIMRHKPQTATN 212 + + I E +L ++ +V N N+ +Q P A+ Sbjct: 176 TAEQNGEEVVLFDIVKSYRLYPEQFLVELNVSVENRNASEQDLELVLSMFGYQDPNAASG 235 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS--WLGISDKYWASVFIPSKETS 270 + G E + +E F + W G++ Y+ P +T Sbjct: 236 GWFASIDLTWKGGCLIDEELETQTVEDLEEGAFFQKGDLAWTGLTHNYFLFAASPKNDTD 295 Query: 271 FHS--QFKYLSDGHARYQAKFSANEITILPGKSITT-TNFLFAGAKEFPTIHHYEKDLA- 326 + + +A + G + + G K + +A Sbjct: 296 ARIGCRLSTVEGETGVMRADILFPAFRVRAGDPRMLRSVVAYIGPKYVDKLEAIPGVIAH 355 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P FE +D GWF F A P+ L+ F +LVGN+G+AI+L TV VKL P K S Sbjct: 356 NPHFEKSVDLGWFGFFAAPLLWLLRMFESLVGNWGVAIVLLTVLVKLTLLPFTTKSMRSM 415 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M ++PKI+ L++K+K Q Q+ M+ LY+TH +NP+AGC P+LLQ+P++FA+Y++ Sbjct: 416 KQMSKLRPKIEALQKKYKD-DRQRQQEEMMALYRTHGVNPVAGCLPMLLQMPIWFALYRM 474 Query: 447 ISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + E+ HAP GWI DL A DP I PI++ + MF+Q Sbjct: 475 LMTAGELYHAPLVPGWIDDLTAVDPYY-------------------ILPILLVVMMFLQA 515 Query: 506 KMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 K+SP D Q ++ + +P+ F P+GL +Y + ++ V I Sbjct: 516 KLSPTQPDSPQQKMMMYGLPLSFGVFSFFLPSGLTLYILTNTFLTAVHHIWINHSDPVAK 575 Query: 565 GLIDRLRSTFSKNYNS 580 + + +S ++ Sbjct: 576 PVSEVKKSGEDAKPSA 591 >gi|78187971|ref|YP_376014.1| Oxa1/60 kDa IMP family protein [Chlorobium luteolum DSM 273] gi|123582400|sp|Q3B110|OXAA_PELLD RecName: Full=Inner membrane protein oxaA gi|78167873|gb|ABB24971.1| protein translocase subunit yidC [Chlorobium luteolum DSM 273] Length = 585 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 114/571 (19%), Positives = 216/571 (37%), Gaps = 28/571 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N +AL +I+ W F + +Q NS Sbjct: 1 MD--RNSVTGLALIALIMIVWLQFMSPEKKPLQQVTDAGKARTEQVAAEINSDMQPAAVP 58 Query: 61 RAQ---------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 + A + N ++ KGA L L+ + + N L+ Sbjct: 59 ATEDSFGMFAPAASGTERLTVIDNDLFHAVVSSKGATLKSLVLKKH---LDGNLKPFDLV 115 Query: 112 SPSNT---KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 S + + ++ S+ T +L +I Sbjct: 116 SDAKNGALSMLFLTREGRRIDTRDLYFAGSSLDTLHTIKGKETYALSYRLALSPRQSIEV 175 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF-IAVLGDK 227 T + + Y +T S + + P T N + Sbjct: 176 SYTFT-GDSYRIGYDVKLTGLSGSLAGNEYQVQWDGGLPYTEKNRDDEARSAQASAYLGG 234 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 SLV+ +S W+ + +KY+ + IP T+ G+A Sbjct: 235 SLVKLDAEKDGRSYREEQSGDARWVAVRNKYFIAALIPEDRTAGFYLDGQKERGNAYENY 294 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 S + + + L+ G ++ T+ D+ + DW F + Sbjct: 295 LASLKMEVPASEEVVDSRFSLYLGPLDYNTVKAQHADIEKI-MDFGWDWLTRPFAEFVIL 353 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ V N+G+ I++ +KL+ +PL+ S M +QP + EL++K+K +P Sbjct: 354 PAFTWMNRFVSNYGLIIIIFAFLIKLVTYPLSTASTKSMKKMAALQPMLKELQDKYKDNP 413 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 ++ + ++YK +NPL GC P++LQ+P+ FA++ V S+++R + W+KDL+ Sbjct: 414 AKLQS-ELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQLRQ-HGFLWVKDLSV 471 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVV 526 D +I +P Y H+ + PI+M++++F+Q K++P Q I+ +M P + Sbjct: 472 PD--SILDFGFTIPMYGS---HIALLPILMAVTVFLQQKITPTAQSNDQMKIMLYMFPAM 526 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ P+GL +Y+ NV S+ QQ I Sbjct: 527 MLLFFNNMPSGLALYYLMFNVFSVAQQFYIN 557 >gi|189347989|ref|YP_001944518.1| 60 kDa inner membrane insertion protein [Chlorobium limicola DSM 245] gi|254772766|sp|B3EIM7|OXAA_CHLL2 RecName: Full=Inner membrane protein oxaA gi|189342136|gb|ACD91539.1| 60 kDa inner membrane insertion protein [Chlorobium limicola DSM 245] Length = 583 Score = 256 bits (653), Expect = 8e-66, Method: Composition-based stats. Identities = 113/570 (19%), Positives = 219/570 (38%), Gaps = 31/570 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N +AL +I+ W F + + R QT +Q A L D Sbjct: 1 MD--RNSVTGLALIALIMIVWLQFMSPDKKSVQPDNRPKAQTTATVSQEKTEAPAALRSD 58 Query: 61 R-----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 + V + N +++ KGA + L+ + + L+S + Sbjct: 59 TFGVFAEASTGAEELVTVDNELFTMTLSSKGATIKSVVLKNH---LDGQLKPFDLVSSHD 115 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 L+ + V + + + N + Sbjct: 116 KGALSLLFLNVEGKKIDTRELYFRLVSQEKKQTLSGKKIAVVRYRLDINPQQAIDIVYRF 175 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSLVEQ 232 +K+ V D ++ SLV+ Sbjct: 176 SGNSYKVDYDVKLTGFDNALAGNEYQLQWDGGLAYSEKNREDESHNALAGAFLGGSLVKI 235 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 S ++ W+ + +KY+ + IP +T + + S Sbjct: 236 DASKENQTYREEQSGEAGWVAVRNKYFVAALIPGSKTEG-IYLEGKKGSGHFEEYLASLK 294 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMFM 348 K + L+ G ++ T+ + + E ++D+GW + F + Sbjct: 295 MSVPSTEKVASNHFSLYIGPLDYNTVKTLDAN-----LEKIMDFGWDWLTRPFAEYVILP 349 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 + ++ + N+G+ I++ + +KL+ +PL+ S M +QP + EL+EK+K +P Sbjct: 350 VFTWMNGFISNYGLIIIIFALLIKLVTYPLSMASTKSMKKMAALQPMLKELQEKYKDNPA 409 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 ++ + ++YK +NPL GC P++LQ+P+ FA++ V S+++RH + W KDL+ Sbjct: 410 KLQS-ELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQLRH-HGFLWAKDLSVP 467 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVF 527 D +I +P Y H+ ++PI+M +++FIQ K++P Q ++ + PV Sbjct: 468 D--SILDFGFSIPVYG---DHIAVFPILMGVTVFIQQKITPTTQSNDQMKMMLYIFPVTM 522 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ PAGL +Y+ NV S+ QQ I Sbjct: 523 LLFFNNLPAGLGLYYLMFNVFSVAQQFYIN 552 >gi|291277160|ref|YP_003516932.1| inner membrane protein OxaA [Helicobacter mustelae 12198] gi|290964354|emb|CBG40204.1| putative inner-membrane protein, OxaA [Helicobacter mustelae 12198] Length = 546 Score = 256 bits (652), Expect = 1e-65, Method: Composition-based stats. Identities = 140/579 (24%), Positives = 239/579 (41%), Gaps = 66/579 (11%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N N +A+A S I + + ++V P+ + N KN ++ Q + A Sbjct: 1 MKNNSNLRIILAVAFSFIFIAIYSRYFVTPQ-QNAKNSAKNSTSIAQNQAPVKTENASSP 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN----SPIVTLLSPS 114 +A S + ++ I+ G + + L+ LL Sbjct: 60 APILEAESKNIIARIQAKEFDLEIDSLG-RIAQVYLKNKKYTGEQELGFFEHFKILLGMM 118 Query: 115 NTKNAY----------FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA- 163 L+ + L T + I P LV Sbjct: 119 QKPKPLSKLPLFHPSELKPLEIRFANQELNLQAFKTSYEASKDFISLDKGPEVLVLTQKL 178 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + ++T++ E+ + I ++N S + I G I Sbjct: 179 PGLTVKKTLTFYENLKYDIQVELSNPSEN-------YFITNGARPMTDKENYAFNGVILE 231 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 D + + + D + + ++ D+Y+ ++F + Sbjct: 232 KVDGKIEKIEDKD---AKELKTFDGAKFVASVDRYFTTLFYAKNSQLDVIIDSNPKNKDP 288 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 + F G K++ + + P ++++G F A Sbjct: 289 MPYV-----------HATGNLGMGGFIGPKDYQELKSVD-----PALRNVVEYGLITFFA 332 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 KP+F+L+ Y + +GN+G AI+ TV VKL+ +PL+ K VS +K++ PK+ E++EK+ Sbjct: 333 KPVFLLLEYLHQYIGNWGWAIITLTVIVKLVLYPLSYKGMVSMQKLKDLTPKMKEIQEKY 392 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K PQ LQ M+QLYK H NP+ GC P+L+QIP+F+AIY+V+ S+E++ APF WI+ Sbjct: 393 KG-DPQKLQMHMMQLYKKHGANPMGGCLPLLIQIPIFYAIYRVLYNSVELKSAPFILWIQ 451 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNW 522 DL+ DP + PI+M +SM++Q ++P D QA + Sbjct: 452 DLSVMDPYF-------------------VLPILMGVSMYVQQALTPNTFTDPIQAKVFKM 492 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +PVVF L FPAGL++YW+ +N++SI QQ I KM Sbjct: 493 LPVVFTIFLIFFPAGLVLYWTINNILSIFQQLSINKMLK 531 >gi|194337886|ref|YP_002019680.1| 60 kDa inner membrane insertion protein [Pelodictyon phaeoclathratiforme BU-1] gi|254773008|sp|B4SHH0|OXAA_PELPB RecName: Full=Inner membrane protein oxaA gi|194310363|gb|ACF45063.1| 60 kDa inner membrane insertion protein [Pelodictyon phaeoclathratiforme BU-1] Length = 583 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 110/574 (19%), Positives = 227/574 (39%), Gaps = 29/574 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N +A+ +I+ W F + + ++ +TV Q + + + D+ Sbjct: 1 MD--RNSVTGLAIIAVIMIVWLQFMSPEKKPLLPSKTVKTETVVQSDVQVPAVSIPAADN 58 Query: 61 ----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + + ++++N +++ KGA L L+ + + N L+S Sbjct: 59 FGVFASSSGGQEKLLKVENDLFRATLSSKGATLKSLVLKKH---LDGNRLPFDLVSNGKN 115 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 L + + V I + + I Sbjct: 116 GALSLLFLTREGKKIDTRDLYFSNVTLDTLRTIKGKESYAVRYHLDVAPQQAIDIIFGFT 175 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSLVEQK 233 +K+ V ++ Q + SLV+ Sbjct: 176 GDSYKVDYDVKLTGFASELAGNEYQVQWDGGVPFSEKNRPDEAQSALASAYLGGSLVKLD 235 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 S ++S W+ + +KY+ + IP +++ G+ + Sbjct: 236 ASKEKQSYREEQSGEAQWVAVRNKYFVAALIPHGKSAGIYLDGKRETGNDFESYLAALKI 295 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMFML 349 + L+ G ++ + + E ++D+GW + F + + Sbjct: 296 AVPSTAGVVDDKFSLYLGPLDYNIVKAQKV-----GLEKIMDFGWDWLTRPFAEFIILPV 350 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 S+ V N+G+ I++ +KL+ +PL+ S M +QP + EL+EK+K +P + Sbjct: 351 FSWMNGFVSNYGLIIIIFAFLIKLVTYPLSMASTKSMKKMSALQPALKELQEKYKDNPAK 410 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + + ++YK +NP+ GC P++LQ+P+ FA++ V S+E+R + W KDL+ D Sbjct: 411 LQS-ELGRIYKEAGVNPIGGCLPVVLQMPLLFAMFYVFRSSIELRQHS-FLWAKDLSVPD 468 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFV 528 +IF +P Y H+ ++PI+M++++++Q K++P Q ++ +M P + + Sbjct: 469 --SIFDFGFAIPMYGS---HIAVFPILMAVTVYLQQKITPTTQSNEQMKVMMYMFPAMML 523 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ PAGL +Y+ N+ S+ QQ I K A Sbjct: 524 LFFNNMPAGLGLYYLMFNIFSVAQQFYINKTTTA 557 >gi|284036928|ref|YP_003386858.1| membrane protein insertase [Spirosoma linguale DSM 74] gi|283816221|gb|ADB38059.1| membrane protein insertase, YidC/Oxa1 family [Spirosoma linguale DSM 74] Length = 621 Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 111/608 (18%), Positives = 233/608 (38%), Gaps = 50/608 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + I L + ++ +Q P E+ ++ + V + Sbjct: 1 MD--RNQLIGIVLILAMLVGYQLLVPKPAPEKQAAQQTQPTKPTTASGVAATDTGAANSA 58 Query: 61 RAQ----------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + A + + ++N + + +G + ++ L+ Y + Sbjct: 59 QQTPDSAALTAKFGDFATVATGQARDIVVENNDIKVTFTTQGGRVKEVVLKKYKTF---D 115 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 + L+ +++ L+ + ++L G + + + A Sbjct: 116 QKPLVLIDEKSSQ----TLLELPTNQGKVDLHKLYYQTTAQGGTVSGQAQQLVFRAEVAP 171 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 E+ ++ D N + I + K + N + Sbjct: 172 GQSVEQVYTIPAEGYVLDYDLKLNGLSNAIGTGDIRFFWQDKMRQYENDLSNNRRAATIN 231 Query: 225 GDKSLVE-QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + + +K ++ E + + E W I KY+ S F+ + FK L + Sbjct: 232 YLTADEDFEKLTEGESNQEATVEEPVQWFTIKHKYFLSGFVARNSPLTKANFKALVNPAD 291 Query: 284 RYQAKFSANEITIL--PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF-- 339 K + ++T+ K+ LF G +F + P F+ + G+ Sbjct: 292 SSVVKTAIADVTLPIADVKAGKGQYKLFYGPNDFQLLGSVA-----PEFDQNVYLGYSIL 346 Query: 340 -YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + ++ + N+G+ I+ VFVKL+ PL K Y+S A M+ +QP+++E Sbjct: 347 KPINKYFFVPVFNFLEKFIANYGLLIIALVVFVKLILTPLTYKSYISMAKMRVLQPELNE 406 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++E+ + ++LY+ ++PL+GC P+L +P+ F+++ + +E+R Sbjct: 407 MKERVGDDMAKQQS-EQMKLYQEVGVSPLSGCVPVLATMPILFSLFMLFPNLIELRQKS- 464 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADK 514 + W DL+ D F F LPF H+ ++ ++M++S + + +P Sbjct: 465 FLWANDLSTYD---AFITFPTLPFIGS---HLSLFTVLMTISSIAYAYYNNQTTPTQPGP 518 Query: 515 GQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + P++F+F L+S+PAGL Y+ SNV++I QQ +I + E + L Sbjct: 519 VNMKAMSYVFPLMFMFVLNSYPAGLTFYYFVSNVVTIAQQQLI-RRFVDEDKIKAVLDEN 577 Query: 574 FSKNYNSQ 581 KN + Sbjct: 578 RRKNAAGE 585 >gi|193213717|ref|YP_001999670.1| 60 kDa inner membrane insertion protein [Chlorobaculum parvum NCIB 8327] gi|254772767|sp|B3QLY4|OXAA_CHLP8 RecName: Full=Inner membrane protein oxaA gi|193087194|gb|ACF12470.1| 60 kDa inner membrane insertion protein [Chlorobaculum parvum NCIB 8327] Length = 587 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 113/573 (19%), Positives = 216/573 (37%), Gaps = 34/573 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY-------PRIEEMNNERKNIQTVKQPNQVDNSY 53 M+ N + +L +I+ W F P +K+ + + Sbjct: 1 MD--RNSVIGFSLIAVIMIVWLQFMKPEQKTMLDPVPPSREMVQKDAAENAPASAAPETA 58 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A L + + + N ++ KGA + L+ + + N L+S Sbjct: 59 AESLGSFAKASTGTEQIITVDNDLFTAELSSKGATLKSMVLKKH---LDVNGKPFNLISE 115 Query: 114 SNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 N L + +L + + V + + T Sbjct: 116 KNKGALSMLFLSNDGKRIDTRDLYFRSLDTKKSETVTGKEKLSVSFVLDVDASRSMQVTY 175 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSL 229 + I + N ++ + L Sbjct: 176 TFTGDSYV-IDYDLKLNGFGSTLAGNEYQLDWDGGLVYSEKDTADESHNAISSAYLGGGL 234 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 ++ D +K W+ + +KY+ + IP +ET DG Sbjct: 235 LKLDAKDSKKRYQEEESGKAEWVAVRNKYFVAAMIPERETEGVFLQGTKKDGVDFENYTA 294 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKP 345 + + S+T L+ G ++ T+ D E ++D+GW + F Sbjct: 295 ALKMMIPAGQNSVTDRYRLYVGPLDYNTVRSLHVD-----LEKIMDFGWDWLTRPFAEYL 349 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + + ++ V N+G+ I++ +K + +PL+ S M +QP + E++EK+K Sbjct: 350 ILPIFNWMNKYVTNYGLIIIIFAFLIKTVTWPLSLASTKSMKKMSALQPMMKEIQEKYKN 409 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 P ++ + ++YK +NPL GC P ++Q+P+ FA++ V S+++R + W+KDL Sbjct: 410 DPAKLQS-ELGRIYKEAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQLRQ-HGFLWVKDL 467 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-P 524 + D +I LP Y H+ + PI+M++++F Q K++P Q I+ WM P Sbjct: 468 SVPD--SILDFGFKLPLYG---DHIALMPILMAVTVFFQQKITPTTQTNDQMKIMIWMFP 522 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + ++ P+GL +Y+ NV SI QQA I Sbjct: 523 AMMLLFFNNMPSGLALYYLMFNVFSIAQQAYIN 555 >gi|261840125|gb|ACX99890.1| putative inner membrane protein translocase component YidC [Helicobacter pylori 52] Length = 544 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 134/588 (22%), Positives = 235/588 (39%), Gaps = 60/588 (10%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N +AIALS + + + F+ P + + N+++A Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNQTTTTKQETTNNHTATNSNTLNAFSAT 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LL 111 + LS + I+ G + + L+ ++ L Sbjct: 61 QAIPQENLLS-----TISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLF 113 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 +P EL ++ L L + TP + K ++ + Sbjct: 114 NPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQD 173 Query: 172 -----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 I + + + P I A G + D Sbjct: 174 LGALTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYRPVADLDSYTFSGVLLENND 233 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 K + + + D + + +L D+Y+ ++ F + Sbjct: 234 KKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDSQGFEALIDS--------- 281 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + G K++ ++ P +I++G F AK + Sbjct: 282 -EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGV 335 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL+EK+K Sbjct: 336 FVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKG- 394 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ Sbjct: 395 EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLS 454 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPV 525 DP I P++M SM+ ++P D QA I ++P+ Sbjct: 455 IMDPYF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKFLPL 495 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 496 LFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQNKKE 543 >gi|189218938|ref|YP_001939579.1| preprotein translocase subunit YidC [Methylacidiphilum infernorum V4] gi|189185796|gb|ACD82981.1| Preprotein translocase subunit YidC [Methylacidiphilum infernorum V4] Length = 592 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 99/599 (16%), Positives = 234/599 (39%), Gaps = 46/599 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + ++ +S++++ AWQ + Y + + + + + + + + +++ Sbjct: 1 MVMDKKGWIGFGISLVLLLAWQIYVEYRYVRQQPSPVEQTPSALPNSSEETASGQQPLNN 60 Query: 61 RAQALSMSPRVELK--------------NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + + ++ P + N + + G ++ L+ + Sbjct: 61 QQENQTLGPLESFEKSPDLGKEIVHYLENDKIRVAFTSWGGAIQNIELKEHFFRGPKGKE 120 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 + L + D + + + T + Sbjct: 121 NILLNRFDEEPLLNLSGWDSKYNLSGYQSESKEGKIFFRRDLPGGVTVERIFSLGQDYQV 180 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 + E+ + + N + + Sbjct: 181 IMEQRLINRSSLPVTLPSYRVNMGLASPIHIKEAIQNLAVNWLTLKGSRFGRIGLPDFNA 240 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVF-------------IPSKETSFHS 273 + Y ++ IS+ +E W+ + ++Y+A V +P + + F Sbjct: 241 AGFLGLFYWRGPRTVISSPNEPLRWVAVKNQYFAIVVSPPSTLPPIQIEAVPVELSQFPL 300 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + + +A E+++ P ++ + G KE+ + + + Sbjct: 301 EQSSQAQVPVGIKAWAYFPELSLQPNSILSVQFKTYGGPKEYARLKKLGD-----HIDRV 355 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +++G + ++ KP+ M +F++ + N+G+ I+L T+ +K +F+PL K + M+ + Sbjct: 356 MEYGMWGWVVKPLVWCMVHFHSFIPNYGLDIILFTLLLKGIFWPLQSKANRNMKAMQALS 415 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ EL+ ++K P ++ Q M++LY+ + +NPL GC P+L+QIP+F Y ++ S+E+ Sbjct: 416 PKLKELQARYKDQPDKM-QAEMMKLYREYGVNPLGGCLPMLVQIPIFIGFYTMLQGSVEL 474 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R+ + WI+DL D G+ + P+IM + + +M+P +D Sbjct: 475 RNQS-FLWIRDLTKPDTIFHIPTLGLD---------INPLPLIMVGTQILLSRMTPQASD 524 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 Q + WMPV F+ +F + L +YW+ +N+++IVQ + + ++ R++ Sbjct: 525 NPQLKVFQWMPVFFLVFFYNFASALSLYWTVNNLVTIVQTY---RNLKKPLPVLHRVKK 580 >gi|308062713|gb|ADO04601.1| putative inner membrane protein translocase component YidC [Helicobacter pylori Cuz20] Length = 547 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 137/580 (23%), Positives = 237/580 (40%), Gaps = 61/580 (10%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERK---NIQTVKQPNQVDNSY 53 M++N N +AIALS + + + F+ P ++ N T PN N++ Sbjct: 1 MDKNNNANIRLILAIALSFLFIAIYSYFFQKPNKTTTPTTKQETTNNHTATSPNNTPNAF 60 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT---- 109 +A + LS + I+ G + + L+ + Sbjct: 61 SATQAIPQENLLS-----TISFEHARIEIDSLG-RIKQVYLKDKKYLTPKEKGFLEHVSH 114 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 L +P EL ++ L L + TP + K ++ Sbjct: 115 LFNPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLT 174 Query: 170 RT-----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + I + + + + P I A G + Sbjct: 175 QDLGALTIIKTLTFYDDLHYDLQIAFKSPNKIIPSYVITNGYRPVADLDSYTFSGVLLEN 234 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 DK + + + D + + +L D+Y+ ++ F + Sbjct: 235 NDKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS------- 284 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + + G K++ ++ P +I++G F AK Sbjct: 285 ---EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIL-----PMLTDVIEYGLITFFAK 336 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL+EK+K Sbjct: 337 GVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYK 396 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI D Sbjct: 397 G-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHD 455 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+ DP I P++M SM+ ++P D QA + ++ Sbjct: 456 LSIMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKLFKFL 496 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P++F L +FPAGL++YW+ +N++S++QQ +I K+ + Sbjct: 497 PLLFTIFLITFPAGLVLYWTTNNILSVLQQFIINKVLENK 536 >gi|189501466|ref|YP_001960936.1| 60 kDa inner membrane insertion protein [Chlorobium phaeobacteroides BS1] gi|254772768|sp|B3EQF7|OXAA_CHLPB RecName: Full=Inner membrane protein oxaA gi|189496907|gb|ACE05455.1| 60 kDa inner membrane insertion protein [Chlorobium phaeobacteroides BS1] Length = 587 Score = 254 bits (647), Expect = 4e-65, Method: Composition-based stats. Identities = 118/578 (20%), Positives = 225/578 (38%), Gaps = 40/578 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY---PRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ N + + L +I+ W F P E M + ++ + + AV Sbjct: 1 MD--KNSVIGLVLIGLIMIVWMQFMAPENKPVPERMTADVTGVEETSAKSGTGSPAVAVS 58 Query: 58 IDD------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + + N ++ +GA + L+ + +++N L+ Sbjct: 59 AVPETFGEFSAATEGEEKLLTIDNELFTAVLSSRGATLKSMVLKKH---LNANRERFDLI 115 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL---TPTTPIKLVFKNANNILF 168 N+ + + S NI+ + + + + + A Sbjct: 116 --KNSDSGALSLFFQTSDGKNIDTRDLYFEPSDTQKTVSLTGEESYTVTYRLDVAPEKSI 173 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 + ++ I V D + ++ + E + Sbjct: 174 TIVYTFTGD-VYGINYDVQFTGFDGVLPGNEYQLEWDGGLLYSEKNIDDELQNSWASAYM 232 Query: 229 ---LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 L++ SD K W+ + KY+ + IPS T G Sbjct: 233 GGSLLKLDASDPSKEYREEQSGVAGWIAVRSKYFVASLIPSSPTDGVYLKGSGKPGEKFE 292 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + K+ + + LF G ++ +H + E ++D+GW + Sbjct: 293 DYTAALKFTLPQNEKTHSESLVLFVGPVDYNVLHSLNVN-----LEKIMDFGWDWLTRPF 347 Query: 346 MFMLMSYFYNL----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 ++ ++L N+G+ I++ + +KL+ +PL S M +QP + EL+E Sbjct: 348 AEYIILPIFDLLSKLTSNYGLIIIIFALLIKLVTYPLTMASTKSMKKMAALQPMMKELQE 407 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K +P Q +Q + ++YK +NPL GC P+LLQ+P+ FA++ V S+E+R + W Sbjct: 408 KYKDNP-QKMQSELGRIYKEAGVNPLGGCLPVLLQMPLLFAMFYVFRSSIELRQQS-FLW 465 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-IL 520 KDL+ D +I L +P Y H+ ++PI+M ++++Q K++P Q +L Sbjct: 466 AKDLSLPD--SILDLGFSIPLYG---DHIALFPILMGGAVYLQQKITPTAQSNDQMKAML 520 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 PV+ + ++ PAGL +Y+ NV SI Q I K Sbjct: 521 YIFPVMMLLFFNNLPAGLGLYYLMFNVFSIAQTFYINK 558 >gi|308064207|gb|ADO06094.1| putative inner membrane protein translocase component YidC [Helicobacter pylori Sat464] Length = 547 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 137/591 (23%), Positives = 240/591 (40%), Gaps = 63/591 (10%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERK---NIQTVKQPNQVDNSY 53 M++N N +AIALS + + + F+ P ++ N T PN N++ Sbjct: 1 MDKNNNANIRLILAIALSFLFIAIYSYFFQKPNKTTTPTTKQETTNNHTATSPNNTPNAF 60 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT---- 109 +A + LS + I+ G + + L+ ++ Sbjct: 61 SATQAIPQENLLS-----TISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVS 113 Query: 110 -LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L +P EL ++ L L + TP + K ++ Sbjct: 114 HLFNPKANPQISLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVL 173 Query: 169 ERT-----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I + + + + P I A G + Sbjct: 174 TQDLDALTIIKTLTFYDDLHYDLQIAFKSPNKIIPSYVITNGYKPVADLDSYTFSGVLLE 233 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 DK + + + D + + +L D+Y+ ++ F + Sbjct: 234 NNDKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS------ 284 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 + + G K++ ++ P +I++G F A Sbjct: 285 ----EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFA 335 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 K +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL+EK+ Sbjct: 336 KGVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKY 395 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI Sbjct: 396 KD-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIH 454 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNW 522 DL+ DP I P++M SM+ ++P D QA + + Sbjct: 455 DLSIMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKLFKF 495 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 496 LPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQSKKE 546 >gi|322379151|ref|ZP_08053547.1| 60 kDa inner-membrane protein [Helicobacter suis HS1] gi|322381048|ref|ZP_08055076.1| inner membrane protein translocase component YidC [Helicobacter suis HS5] gi|321146518|gb|EFX41390.1| inner membrane protein translocase component YidC [Helicobacter suis HS5] gi|321148414|gb|EFX42918.1| 60 kDa inner-membrane protein [Helicobacter suis HS1] Length = 547 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 133/566 (23%), Positives = 229/566 (40%), Gaps = 47/566 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 E N + +AI LS + + + F+ + T + +NS LI Sbjct: 17 ENNLRFILAIVLSFLFLTIYGYFFQTEKPH----------TALPTSTTNNSAPTTLIKQA 66 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI---VTLLSPSNTKN 118 AQ S + + + + I+ G + + L+ + L + Sbjct: 67 AQTPKSSIILTVLSKDMEIEIDSLG-RIAQVYLKDKKFTAHRQEDFLEHIKQLLGLSKPK 125 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 + +L + + L L TP + ++ Sbjct: 126 SALEKLPLLGSNALKPLELRFVDSTLNQEAFNTPYIASTQTLQIDKAPKTVVLTQSLKNL 185 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 K + T N +R + + +N L+ + +E Sbjct: 186 NVKKILTFYPNLTYDLRVELKPTHPMNLAYVLSNGSRPIADADGYAFHGVLLGTQDHKLE 245 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 K ++ + ++ FI S + + S F + + Sbjct: 246 KIEDGKAKQT-------QTFKSTTFIASVDRYYTSLFFTKDSPLDAIIEAQPSKDPLPFV 298 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 + G K+ + P +I++G F A+P+F+L+ Y + Sbjct: 299 SLKGNAILHGYIGPKDHRLLEQIS-----PMLTKVIEYGVITFFARPVFLLLDYLHTYTH 353 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G AI+L T+ V+++ +PL+ K VS +K++ PK+ EL+EK+ +S PQ LQ M+QL Sbjct: 354 NWGWAIILLTLIVRIILYPLSYKGMVSMQKIKDLAPKMKELQEKY-KSDPQKLQMHMMQL 412 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK H NPL GC PILLQIPVFFAIY+V+ ++E++ A + WI DL+ DP Sbjct: 413 YKKHGANPLGGCLPILLQIPVFFAIYRVLYNAVELKSAGWMLWIHDLSLMDPYF------ 466 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAG 537 I P++M +SM+ Q ++P D QA I +P+ F L +FPAG Sbjct: 467 -------------ILPLLMGISMYAQQALTPSTITDPTQAKIFKMLPLFFTIFLITFPAG 513 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563 L++YW+ +N+ SI+QQ +I +M + Sbjct: 514 LVLYWTTNNIFSIIQQWLINQMLSKK 539 >gi|298735584|ref|YP_003728107.1| preprotein translocase subunit YidC [Helicobacter pylori B8] gi|298354771|emb|CBI65643.1| preprotein translocase YidC subunit [Helicobacter pylori B8] Length = 544 Score = 253 bits (645), Expect = 7e-65, Method: Composition-based stats. Identities = 135/589 (22%), Positives = 231/589 (39%), Gaps = 66/589 (11%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 N N +AIALS + + + F+ P ++ + A Sbjct: 4 NNNTNLILAIALSFLFIALYSYFFQKPNKPTTQTTKQETTNNHTATSPNAPNAFSATQTI 63 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNT 116 Q +S + I+ G + + L+ ++ L S Sbjct: 64 PQENLLSA---ISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSSKEN 118 Query: 117 KNAYFAELDYVSTANNIEL----------PNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 EL ++ L + S L P + L Sbjct: 119 MQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGAFT 178 Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 + + D+ HY KI NN P I A G + Sbjct: 179 IIKTLTFYDDLHYDLKIAFKSPNN------LIPSYVITNGYRPVADLDSYTFSGVLLENN 232 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 DK + + + D + + +L D+Y+ ++ F + Sbjct: 233 DKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS-------- 281 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + G K++ ++ P +I++G F AK Sbjct: 282 --EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKG 334 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F+L+ Y Y VGN+G AI+ T+ V+++ +PL+ K VS +K + PK+ EL+EK+K Sbjct: 335 VFVLLDYLYQFVGNWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKG 394 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL Sbjct: 395 -EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDL 453 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMP 524 + DP I P++M SM+ ++P D QA I ++P Sbjct: 454 SIMDPYF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKFLP 494 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 495 LLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRMHAQNKKE 543 >gi|15646059|ref|NP_208241.1| putative inner membrane protein translocase component YidC [Helicobacter pylori 26695] gi|38502836|sp|O25989|OXAA_HELPY RecName: Full=Inner membrane protein oxaA gi|2314626|gb|AAD08491.1| 60 kDa inner-membrane protein [Helicobacter pylori 26695] Length = 547 Score = 253 bits (645), Expect = 7e-65, Method: Composition-based stats. Identities = 129/587 (21%), Positives = 228/587 (38%), Gaps = 55/587 (9%) Query: 1 ME---RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ N +AIALS + + + F+ P ++ N+ A Sbjct: 1 MDKNNNNLRLILAIALSFLFIALYSYFFQKPNKTTTQTTKQETTNNHTATS-PNAPNAQH 59 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLS 112 + + I+ G + + L+ ++ L S Sbjct: 60 FSTTQTTPQENLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFS 117 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT- 171 EL ++ L L + TP + K ++ + Sbjct: 118 SKENAQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDL 177 Query: 172 ----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 I + + + P I A G + DK Sbjct: 178 GTLSIIKTLTFYDDLHYDLKIAFKSPNNLIPSYVITNGYRPVADLDSYTFSGVLLENSDK 237 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + + D + + +L D+Y+ ++ F + Sbjct: 238 KIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS---------- 284 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + G K++ ++ P +I++G F AK +F Sbjct: 285 EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVF 339 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 +L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS +K + PK+ EL+EK+K Sbjct: 340 VLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-E 398 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ Sbjct: 399 PQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSI 458 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVV 526 DP I P++M SM+ ++P D QA I +P++ Sbjct: 459 MDPYF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLL 499 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 500 FTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 546 >gi|119358504|ref|YP_913148.1| protein translocase subunit yidC [Chlorobium phaeobacteroides DSM 266] gi|166975858|sp|A1BJZ7|OXAA_CHLPD RecName: Full=Inner membrane protein oxaA gi|119355853|gb|ABL66724.1| protein translocase subunit yidC [Chlorobium phaeobacteroides DSM 266] Length = 579 Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats. Identities = 110/570 (19%), Positives = 223/570 (39%), Gaps = 31/570 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N +AL +I+ W F ++ E + + AA + D+ Sbjct: 1 MD--RNSVTGLALIAMIMIVWLQFMSPENKPKLRTEPVKKELATSAAVTPGAPAAPVGDN 58 Query: 61 ----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS-PSN 115 + ++N +++ KGA + L+ + + + L+S P Sbjct: 59 LGIFATASAGAEQLQTVENDLFKVTLSSKGATIKSVVLKQH---LDGHLKQFNLVSTPDK 115 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + + + +L + + + T I+ V T Sbjct: 116 GALSLLFLSNDGKKIDTRDLYFRSVSLDTLKTLSGTERYVIRYVLDVTPEKAIAITYGFS 175 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSLVEQ 232 + ++I V + ++ S V+ Sbjct: 176 GNS-YRIDYDVKLTGFNNALVGNEYQVQWDGGLVYSEKNREDESHNALAGSYLGGSFVKL 234 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 S ++S W+ + +KY+ + IP T + + Sbjct: 235 DASKDKESYREEQSGLAKWVALRNKYFVAAIIPRGATEGIFLEGRKTAATHFEDYLAALK 294 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMFM 348 + + L+ G ++ T+ D E ++D+GW + F + Sbjct: 295 MSVSATEPVSSNSYSLYVGPLDYNTVKSLGVD-----LEKIMDFGWDWLTRPFAEYIILP 349 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 ++ V N+G+ I++ + +KL+ +PL+ S M +QP + EL+EK+K +P Sbjct: 350 AFTWMNRFVSNYGLIIIIFALLIKLVTYPLSMASTKSMKKMSALQPALKELQEKYKDNPA 409 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 ++ + ++YK +NPL GC P++LQ+P+ FA++ V S+++RH + W KDL+ Sbjct: 410 KLQS-ELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQLRH-HGFLWAKDLSVP 467 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVF 527 D +I +P Y H+ ++PI+M++++F+Q K++P Q I+ +M P + Sbjct: 468 D--SILDFGFAIPMYG---DHIAVFPILMAITVFVQQKITPTAQSNEQMKIMMYMFPAMM 522 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + ++ PAGL +Y+ N+ S+ QQ I Sbjct: 523 LLFFNNLPAGLGLYYLMFNIFSVAQQFYIN 552 >gi|317010178|gb|ADU80758.1| putative inner membrane protein translocase component YidC [Helicobacter pylori India7] Length = 546 Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats. Identities = 138/593 (23%), Positives = 233/593 (39%), Gaps = 68/593 (11%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N +AIALS + + + F+ P ++ + A Sbjct: 1 MDKNNNTNTRLILAIALSFLFITLYSYFFQKPNKTTTQTTKQETANNHTTTSPNTPNAFN 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLS 112 Q +S + I+ G + + L+ + L S Sbjct: 61 ATQTIPQENLLS---TISFEHARIEIDSLG-RIKQVYLKDKKYLTPKEKGFLEHVGHLFS 116 Query: 113 PSNTKNAYFAELDYVSTANNIEL----------PNSNTVWNLISGKILTPTTPIKLVFKN 162 P EL ++ L + S L P + L Sbjct: 117 PKANPQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDL 176 Query: 163 ANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 + + D+ HY +I +NN P I A G + Sbjct: 177 GALTIIKTLTFYDDLHYDLQIAFKSSNN------IIPSYVITNGYRPVADLDSYTFSGVL 230 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 DK + + + D + + +L D+Y+ ++ F + Sbjct: 231 LENNDKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTENPQGFEALIDS---- 283 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + + G K++ ++ P +I++G F Sbjct: 284 ------EIGTKNPLGFISFKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITF 332 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 AK +F L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K + PK+ EL+E Sbjct: 333 FAKGVFALLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELTPKMKELQE 392 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + W Sbjct: 393 KYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILW 451 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMIL 520 I DL+ DP I P++M SM+ ++P D QA I Sbjct: 452 IHDLSIMDPYF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIF 492 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 493 KLLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQNKKE 545 >gi|261838725|gb|ACX98491.1| inner membrane protein [Helicobacter pylori 51] Length = 546 Score = 252 bits (644), Expect = 8e-65, Method: Composition-based stats. Identities = 134/590 (22%), Positives = 236/590 (40%), Gaps = 62/590 (10%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT--VKQPNQVDNSYA 54 M++N N +AIALS + + + F+ P ++ + N+++ Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNKTTTPTTKQETTNNHTATNSNTPNAFS 60 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----- 109 A + LS + I+ G + + L+ ++ Sbjct: 61 ATQTIPQENLLSA-----ISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSH 113 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 L +P EL ++ L L + TP + K ++ Sbjct: 114 LFNPKANPQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLT 173 Query: 170 RT-----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + I + + + P I A G + Sbjct: 174 QDLGALAIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYRPVADLDSYTFSGVLLEN 233 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 DK + + + D + + +L D+Y+ ++ F + Sbjct: 234 NDKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS------- 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + + G K++ ++ P +I++G F AK Sbjct: 284 ---EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAK 335 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL+EK+K Sbjct: 336 GVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYK 395 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI D Sbjct: 396 G-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHD 454 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+ DP I P++M SM+ ++P D QA I ++ Sbjct: 455 LSIMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFL 495 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRTHAQNKKE 545 >gi|27904529|ref|NP_777655.1| hypothetical protein bbp016 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38502982|sp|Q89B34|OXAA_BUCBP RecName: Full=Membrane protein oxaA gi|27903926|gb|AAO26760.1| putative membrane protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 536 Score = 252 bits (644), Expect = 9e-65, Method: Composition-based stats. Identities = 115/494 (23%), Positives = 232/494 (46%), Gaps = 44/494 (8%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 + +K L +NL G + L + ++S+ +V L +N Y A+ Sbjct: 56 IIIKTDVLKIQVNLYGGDIEKAELLHFKSKLNSSQSLVLL--DTNENFVYQAQCGITGKD 113 Query: 131 NNIELPNSNTV-----WNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFKIVD 184 L + L + + + I++++ L Y + Sbjct: 114 GADNLQKHIRPLYIAKRKYYELSRHNKKIEVPLQWISKDGIIYKKIFVLKSGEYDVSVKY 173 Query: 185 TVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGV------QEGFIAVLGDKSLVEQKYSDI 237 + N + ++ S G++ + NT+ G + V+ + I Sbjct: 174 KINNITNKHLKVSMFGQLKQTINLPEDKNTYTNNFALQTFRGAAYSSDNDKYVKYSFDSI 233 Query: 238 EKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 N ++ W+ + KY+A+ +IP S+ + S G + + + I I Sbjct: 234 VNKEKKNIVVTHSGWVAMLQKYFATSWIPDN--SYLNTMYIGSSGDNLAEIGYYSRPIDI 291 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 P +I+ ++ L+ G + + + ++ +D+GW +F+++P+F L+++ YN+ Sbjct: 292 FPHSTISLSSKLWIGPEIQNKMAVIASN-----LDLTVDYGWLWFLSQPLFKLLNFLYNI 346 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 GN+G++I+L T +K + FPL K Q+ + A ++ +QPKI+ +++ ++ Q + + ++ Sbjct: 347 CGNWGVSIILITFIIKGITFPLTKSQFKTMAKIRKLQPKINYIKK-KFKNNNQKISEEIM 405 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYKT +NPL GC+P+ +Q+P+F A+Y ++ S+E+RHAPF+ WI DL+ DP Sbjct: 406 SLYKTEKVNPLGGCFPLFIQMPIFLALYYMLISSVELRHAPFFLWIHDLSDQDPFY---- 461 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 + PI+M ++MF +++P D Q I+N++P++F FP Sbjct: 462 ---------------VLPILMGVTMFFIQRVTPSNVTDPVQKKIMNYIPILFTVFFLWFP 506 Query: 536 AGLIIYWSWSNVIS 549 +GL++Y+ SN+++ Sbjct: 507 SGLVLYYLISNLVT 520 >gi|297380697|gb|ADI35584.1| inner membrane protein translocase component YidC [Helicobacter pylori v225d] Length = 546 Score = 252 bits (644), Expect = 9e-65, Method: Composition-based stats. Identities = 132/588 (22%), Positives = 232/588 (39%), Gaps = 58/588 (9%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N +AIALS + + + F+ P ++ NS Sbjct: 1 MDKNNNANIRLILAIALSFLFIAIYSYFFQKPNKTTTPTTKQETTNNHTAT---NSNTPN 57 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LL 111 + + + I+ G + + L+ ++ L Sbjct: 58 AFNATQAIPQENLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLF 115 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 +P EL ++ L L + TP + K ++ + Sbjct: 116 NPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQD 175 Query: 172 -----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 I + + + + P I A G + D Sbjct: 176 LGTLTIIKTLTFYDDLHYDLQIAFKSPNKIIPSYVITNGYRPVADLDSYTFSGVLLENND 235 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 K + + + D + + +L D+Y+ ++ F + Sbjct: 236 KKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALID---------- 282 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + G K++ ++ P +I++G F AK + Sbjct: 283 PEIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGV 337 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL+EK+K Sbjct: 338 FVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKG- 396 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ Sbjct: 397 EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLS 456 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 DP I P++M SM+ ++P D QA I ++P+ Sbjct: 457 IMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFLPL 497 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 498 LFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQSKKE 545 >gi|193216427|ref|YP_001997626.1| 60 kDa inner membrane insertion protein [Chloroherpeton thalassium ATCC 35110] gi|254772769|sp|B3QYV6|OXAA_CHLT3 RecName: Full=Inner membrane protein oxaA gi|193089904|gb|ACF15179.1| 60 kDa inner membrane insertion protein [Chloroherpeton thalassium ATCC 35110] Length = 586 Score = 252 bits (644), Expect = 9e-65, Method: Composition-based stats. Identities = 106/602 (17%), Positives = 217/602 (36%), Gaps = 39/602 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKN-----IQTVKQPNQVDNSYAA 55 M+ N + + L +I+ AW + ++ +++ NQ+ Sbjct: 1 MD--RNTLIGLVLIALIMMAWFQLMAPKKPLPEEKAQQERLEAVAESIDIKNQLVQDSLQ 58 Query: 56 VLIDDR------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + A+ +++++ +++ KGA + Y ++ Sbjct: 59 KANPTQKFGELGQFAVGEEKKIQIETDLFTATLSTKGATLRSFIQKDY---LNYKHEPFN 115 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 L+S + + F N EL I + E Sbjct: 116 LISNEDGTLSLFFATRDGKVVNTGELYFDPKTDQKNFRISGDNKVRIPFEISTEDGRRIE 175 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 T + +T + + + A + Sbjct: 176 ITYIFSGNSYEFGYETNLAGFGKFVSGNEYQVVWTGGLSNAEKNVNDEATNSYAEAYLGG 235 Query: 230 VEQKYSDIEKSSISNFHESNS--WLGISDKYWASVFIPSKETSFHS-QFKYLSDGHARYQ 286 + S + W+ + KY+ + I +ET + ++ Sbjct: 236 STLRLDASHVDETYKEQPSGNAKWVAVRSKYFVAGLISKEETEGVFMEGSRNTNDEKSVF 295 Query: 287 AKFSANEITILPGKSITTTNFL--FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + LP T + + G ++ + + E +ID+GW + Sbjct: 296 EDYMVALKLKLPSDQTTVNSRFSVYIGPLKYDLVKATGSE-----LEKIIDFGWEWVTRP 350 Query: 345 PMFMLMSYFYNLVGNF----GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 L+ +N + N G+ I+L +F+KL+ +PL S M +QP++ ++ Sbjct: 351 FAEYLIIPIFNFLNNHVDSYGVIIILFALFIKLVTYPLTMASTKSMKKMAALQPQLKAIQ 410 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 E++K +P + LQ + +Y+ +NPL GC P ++Q+P+ FA++ V S+++R + Sbjct: 411 EQYKDNPEK-LQAEISGIYREAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQLRQEG-FL 468 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-I 519 W DL+ D +I L +P Y HV + PI+M +++F Q K++P Q + Sbjct: 469 WSNDLSVPD--SILDLPFSIPLYG---DHVSVIPILMGVAVFFQQKLTPSTQTNDQMKFM 523 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 + P + + ++ P+GL +Y+ NV SI QQ I + E ++ +S Sbjct: 524 MYLFPGMMLIFFNNMPSGLGLYYLMFNVFSIAQQFYINQTTETEPVVLKD-KSKQKAKPA 582 Query: 580 SQ 581 + Sbjct: 583 RK 584 >gi|254779961|ref|YP_003058068.1| putative inner membrane protein translocase component YidC [Helicobacter pylori B38] gi|254001874|emb|CAX30124.1| Putative inner membrane insertion protein; putative membrane protein; putative signal peptide [Helicobacter pylori B38] Length = 546 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 129/583 (22%), Positives = 226/583 (38%), Gaps = 52/583 (8%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 N N +AIALS + + + F+ P ++ N+ A Sbjct: 4 NNNTNLILAIALSFLFIAIYSYFFQKPNKTTTQTTKQETTNNHTATN-PNAPNAQNFGTT 62 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNT 116 + + I+ G + + L+ ++ L S Sbjct: 63 QTIPQENLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSSKEN 120 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT----- 171 EL ++ L L + TP + K ++ + Sbjct: 121 AQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGTLS 180 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 I + + + P I A G + DK + + Sbjct: 181 IIKTLTFYDDLHYDLKIAFKSPNNLIPSYVITNGYRPVADLDSYTFSGVLLENNDKKIEK 240 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + D + + +L D+Y+ ++ F + + Sbjct: 241 IEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS----------EIGT 287 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 + G K++ ++ P I++G F AK +F+L+ Sbjct: 288 KNPLGFISLKNEADLHGYIGPKDYRSLKAIS-----PMLTDAIEYGLITFFAKGVFVLLD 342 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 Y Y VGN+G AI+L T+ V+++ +PL+ K VS +K + PK+ EL+EK+K PQ L Sbjct: 343 YLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQKL 401 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ DP Sbjct: 402 QAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSIMDPY 461 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFA 530 I P++M SM+ ++P D QA I +P++F Sbjct: 462 F-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTIF 502 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 503 LITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545 >gi|86160773|ref|YP_467558.1| protein translocase subunit yidC [Anaeromyxobacter dehalogenans 2CP-C] gi|123750290|sp|Q2IHR0|OXAA_ANADE RecName: Full=Inner membrane protein oxaA gi|85777284|gb|ABC84121.1| protein translocase subunit yidC [Anaeromyxobacter dehalogenans 2CP-C] Length = 545 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 120/565 (21%), Positives = 215/565 (38%), Gaps = 32/565 (5%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N +A LSV I+ WQ + + AA Sbjct: 4 DNRRILLATVLSVGILILWQVIFPKKTPPKPAPTPAAEVAKPAAPAAPAPGAAAPAVPAP 63 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTKNAY 120 + V+L ++ G L L + + L+ Y Sbjct: 64 PPDAPEETVKLAGKGFEATLTTYGGALKSLQLEGDKFRKQEKDREVQIDLVH-VTAGQPY 122 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 L ++ + + + + N + + Y Sbjct: 123 PLSLSASPELGGAADVTADPGARAPMRIVAKDASSVTFEGRVGNLAARKTFRVTGKPYEL 182 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + +T + + M ++ G F+ + +++ ++ Sbjct: 183 ALDVELTGGAGNGTVGVLYPAFMPPDTKSGGIFSGPPLDFVRPVCRAGTTTERFDLAKEG 242 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 + SW G+ Y+ + +P++ + + G A + G Sbjct: 243 APEKLEGQVSWAGVDQHYFVAAVLPAEPVGTCTFARGPVKGAG------VAALAIPVEGG 296 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + + ++AG K+ T+ Y + + +F A+ + +M + +V N+ Sbjct: 297 ARKLSLTVYAGPKDLDTLRGYGRGF-ESAIDYGAVAKFFALFARGLLYVMRWLEAIVRNW 355 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G+AI+L TV V+L+ FPL K S M+ +QP+I++L+ KF ++ A++QLY+ Sbjct: 356 GVAIILLTVLVRLVLFPLTYKSMQSMNEMRKLQPEIEKLKAKFGDDREKMNL-AVMQLYQ 414 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 H +NPL GC P+LLQ+PV+FA+Y + S+E+ P + W+KDL A DP Sbjct: 415 KHKVNPLGGCLPMLLQMPVWFALYAALQTSVELYREP-FLWMKDLTAHDPYF-------- 465 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMPVVFVFALSSFPAGLI 539 I PI M +S F+ K+SP PAD QA ++ + P F + P GL Sbjct: 466 -----------ILPIAMGISSFVMQKLSPQPADNAQAKMMLYFFPGFFTVIMLFVPGGLT 514 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEI 564 +Y +N++SIVQQ ++MK A Sbjct: 515 LYIFVNNLLSIVQQQLMMKHQRAAP 539 >gi|317182655|dbj|BAJ60439.1| putative inner membrane protein translocase component YidC [Helicobacter pylori F57] Length = 546 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 134/590 (22%), Positives = 236/590 (40%), Gaps = 62/590 (10%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT--VKQPNQVDNSYA 54 M++N N +AIALS + + + F+ P ++ + N+++ Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNKTTTPTTKQETTNNHTATNSNTPNAFS 60 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----- 109 A + LS + I+ G + + L+ ++ Sbjct: 61 ATQTIPQENLLSA-----ISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSH 113 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 L +P EL ++ L L + TP + K ++ Sbjct: 114 LFNPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLT 173 Query: 170 RT-----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + I + + + P I A G + Sbjct: 174 QDLGALTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYKPVADLDSYTFSGVLLEN 233 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 DK + + + D + + +L D+Y+ ++ F + Sbjct: 234 NDKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS------- 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + + G K++ ++ P +I++G F AK Sbjct: 284 ---EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAK 335 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL+EK+K Sbjct: 336 GVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYK 395 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI D Sbjct: 396 G-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHD 454 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+ DP I P++M SM+ ++P D QA I ++ Sbjct: 455 LSIMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFL 495 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRAHAQNKKE 545 >gi|317013216|gb|ADU83824.1| putative inner membrane protein translocase component YidC [Helicobacter pylori Lithuania75] Length = 546 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 135/589 (22%), Positives = 231/589 (39%), Gaps = 64/589 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 N N +AIALS + + + F+ P ++ N+ A Sbjct: 4 NNNTNLILAIALSFLFIALYSYFFQKPNKTTTQTTKQETTNNHTATS-PNAPNAQNFGTT 62 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNT 116 + + I+ G + + L+ ++ L +P Sbjct: 63 QAISQENLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLFNPKAN 120 Query: 117 KNAYFAELDYVSTANNIEL----------PNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 EL ++ L + S L P + L Sbjct: 121 PQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLNTLT 180 Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 + + D+ HY KI +NN P I A G + Sbjct: 181 IIKTLTFYDDLHYDLKIAFKSSNN------IIPSYVITNGYRPVADLDSYTFSGVLLENN 234 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 DK + + + D + + +L D+Y+ ++ F + Sbjct: 235 DKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDSQGFEALIDS-------- 283 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + G K++ ++ P +I++G F AK Sbjct: 284 --EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKG 336 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F+L+ Y Y GN+G AI+L T+ V+L+ +PL+ K VS +K + PK+ EL+EK+K Sbjct: 337 VFVLLDYLYQFAGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKG 396 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL Sbjct: 397 -EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDL 455 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMP 524 + DP I P++M SM+ ++P D QA I +P Sbjct: 456 SIMDPYF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLP 496 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 497 LLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545 >gi|189485052|ref|YP_001955993.1| protein translocase subunit YidC [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|254778169|sp|B1GZ50|OXAA_UNCTG RecName: Full=Inner membrane protein oxaA gi|170287011|dbj|BAG13532.1| protein translocase subunit YidC [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 519 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 119/558 (21%), Positives = 224/558 (40%), Gaps = 50/558 (8%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD--R 61 N + + LS V+ W F+ P + + TV N + +++ Sbjct: 2 QKNSILFVTLSAFTVFIWYFFFAQPSEQSYRQMMQLQNTVAVSESGVNKFKNADLNEFQI 61 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + + ++ + KG +++ N V L+ P + Sbjct: 62 DDIYAKEEHINIETEQYKAVLTNKGGGVLSWSVKE------KNGQWVDLVFPESA----- 110 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 P NL + I + + + +L + Y+ Sbjct: 111 --------------PVMANFPNLTYKVVSKSAEKIVFEYASKEGWKITKIYNLSDLYMHN 156 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 + +V N+ + + V + K Sbjct: 157 LNISVEKNAKTPFPQIDLKWGPGLGTDSKELKENISLTRALVYTAVKPNKLKKLKDNFEP 216 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 S W + ++Y+ FIP F + ++ Sbjct: 217 ASL----CKWTAVDNRYFLVAFIPKNSMDFDKILFSRLEK--KHPCSVILKAAEPKDVDK 270 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 + + G K++ + Y+ E +D+G+F F+ K F ++ +FY L N+G Sbjct: 271 KDYSVNFYLGPKDYKYLKTYDL-----GLEKTVDFGFFGFLGKIAFSILVFFYKLTHNYG 325 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 AI++ T +++L PL K + S+A MK +QP I +++ K+K +P Q L+ M+ +Y++ Sbjct: 326 WAIIMLTTIIQILVLPLTLKSFKSSAAMKRVQPVIKDIQTKYKDNP-QRLKAEMLNIYQS 384 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NPL GC P+LLQ+P+F+A + ++ + E+R+ + W+KDL+AAD F F + Sbjct: 385 QKVNPLGGCLPMLLQLPIFWAFFTMLRNAYELRNEGWILWVKDLSAADQFMQFGSFNL-- 442 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 + P++M + MF Q +M+ +D Q I+ MPV+F F SFP+GL++Y Sbjct: 443 ---------NLLPLMMGIGMFFQQRMTTVTSDPTQRKIMYIMPVIFTFMFWSFPSGLVLY 493 Query: 542 WSWSNVISIVQQAVIMKM 559 W +++IS+++Q IMK Sbjct: 494 WLTNSLISMIEQYFIMKK 511 >gi|317179626|dbj|BAJ57414.1| putative inner membrane protein translocase component YidC [Helicobacter pylori F30] Length = 546 Score = 252 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 134/590 (22%), Positives = 237/590 (40%), Gaps = 62/590 (10%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT--VKQPNQVDNSYA 54 M++N N +AIALS + + + F+ P ++ + N+++ Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNQTTTQTTKQETTNNHTATNSNTPNAFS 60 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----- 109 A + LS + I+ G + + L+ ++ Sbjct: 61 AAQTIPQENLLSA-----ISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSH 113 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 L +P EL ++ L L + TP + K ++ Sbjct: 114 LFNPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLT 173 Query: 170 RT-----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + I + + + P I A G + Sbjct: 174 QDLGALTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYKPVADLDSYTFSGVLLEN 233 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 DK + + + D + + +L D+Y+ ++ F + Sbjct: 234 NDKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS------- 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + + G K++ ++ P +I++G F AK Sbjct: 284 ---EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAK 335 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL+EK+K Sbjct: 336 GVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYK 395 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI D Sbjct: 396 G-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHD 454 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+ DP I P++M SM+ ++P D QA I ++ Sbjct: 455 LSIMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFL 495 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545 >gi|237750081|ref|ZP_04580561.1| inner-membrane protein [Helicobacter bilis ATCC 43879] gi|229374268|gb|EEO24659.1| inner-membrane protein [Helicobacter bilis ATCC 43879] Length = 577 Score = 252 bits (642), Expect = 2e-64, Method: Composition-based stats. Identities = 131/605 (21%), Positives = 248/605 (40%), Gaps = 91/605 (15%) Query: 1 MERNWNY--FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK-------------- 44 M++ N +A+A+S ++ W F+ + + Sbjct: 1 MDKQSNLRLILAVAISFAVIVIWSKFFAPEPPVKEPQAANQVTDSSVKSENEVIPQSAIN 60 Query: 45 ------QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR--G 96 P N+ + + V +++ I++ GA + L+ Sbjct: 61 TNANIIAPPSSTNASNTMKGIPTSVPQIKENLVRIESQDFDMDIDVSGA-ITQVYLKADK 119 Query: 97 YHL----------------DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 Y N + L P N L + T N +S Sbjct: 120 YTQPHQEGIFTHIGRLFGMVSGENKKLDRL--PLLADNVPLYPLQMIFTDENYRKKSSQI 177 Query: 141 VWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPR 199 ++ I+ L +++ ++ I+++ + +K+ ++ + + Sbjct: 178 KYSTDRSHIVLTDKAETLTLTQDLGDLVVKKIITIEPNMTYKVQIELSKQT--------Q 229 Query: 200 GRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYW 259 I A + V G + + S+ + + D + + + ++ D+Y+ Sbjct: 230 YLISNGMRPNADSESYVFHGVVLQKNNGSIEKIEDGDAKNEGEN--FDDALYVASVDRYY 287 Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 + + + + S G S + G K++ + Sbjct: 288 -TSLLFNIDKPLSLSIGAFSKGLPTPFINV----------SSANEVLHGYIGPKDYRVLE 336 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 P ++++G F AK +F L+ + Y +GN+G+AI++ T+ ++++ FPL+ Sbjct: 337 SIN-----PHLTSVVEYGRITFFAKYIFALLDFLYQYIGNWGVAIIVLTIIIRIILFPLS 391 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K V +K + PK+ +L+ K+K PQ LQ +M++LYK H NPL GC P++LQIPV Sbjct: 392 FKGMVGMQKLKELAPKMKDLQAKYKG-DPQKLQASMMELYKKHGANPLGGCLPLVLQIPV 450 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 FFAIY+V+ ++E+++AP WI DL+ DP + P++M Sbjct: 451 FFAIYRVLYNAVELKNAPLMWWIHDLSVMDPYF-------------------VLPLLMGF 491 Query: 500 SMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 SM++Q ++P D Q + W+PV+F F L +FPAGLI+YW+ +N+ISI+QQ I K Sbjct: 492 SMYLQQALTPTTFTDPMQEKVFKWLPVIFTFFLITFPAGLILYWTINNLISIIQQLAINK 551 Query: 559 MHGAE 563 M ++ Sbjct: 552 MLESK 556 >gi|291333888|gb|ADD93569.1| putative inner membrane protein translocase component YidC [uncultured marine bacterium MedDCM-OCT-S04-C293] Length = 526 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 129/556 (23%), Positives = 239/556 (42%), Gaps = 56/556 (10%) Query: 17 IVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS-------- 68 ++ W P EE +E + P + + + + + A S + Sbjct: 1 MLINWN----PPAQEEAISENTLNNSEYLPTNPISKPNSFVDESSSFAESSNITSLICGA 56 Query: 69 -PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 VE+ N + I+L Q L Y L+++ + TLL K YF + +V Sbjct: 57 EETVEVSNENQKLEISLSSGQIIKSELLNYPLEINGQAN--TLLFNKCGKENYFLDGGFV 114 Query: 128 STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVT 187 + + + + ++++ + N + ISL E++ + Sbjct: 115 VSGMSNAPEGNYF------SVLSKSEDSVEIIRRLPNGSTHSKKISLGENFRINFEEEFF 168 Query: 188 NNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG---DKSLVEQKYSDIEKSSISN 244 N ++ +P +I R +T + + G+ + S + Y S I Sbjct: 169 NGEEVEVSVAPYAKINRSSEKTISGSGGIFTQPSSWAYLGPAFSYDGENYDKRSFSEIEE 228 Query: 245 FHE----SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 S W+ + Y+ + +P++ ++ Q K + + F + P Sbjct: 229 VEFRTSTSGGWISMIQHYFLTSLLPNQSSNSLLQGK-KNKNDGSFSVGFVEETKKVAPRN 287 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 SI ++G K + DL P+ + ID+G+ Y+I +P+F +M+ + ++ Sbjct: 288 SIKNEYSAYSGPKIKGNL-----DLMHPKLGLAIDYGFLYWIGQPIFWVMNLINQAISSW 342 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G +I+L TV +K+ +PL+ Y + M+ +QPK+ EL+E++ Q + + M+ LY Sbjct: 343 GWSIVLVTVLIKIFLWPLSYVAYKNMGKMRQLQPKLKELQERYGD-DRQAMSREMMALYS 401 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +NP GC P+LLQ+P F A Y V+ ++E+RHAPF WI DL+ DP Sbjct: 402 KEKVNPALGCLPMLLQMPFFLAFYWVLIETVELRHAPFMFWIVDLSVRDPLF-------- 453 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFPAGL 538 I P++ +M++ + P PA D QA I +MP++F + FPAGL Sbjct: 454 -----------ILPLLNMGAMYLMQLLQPQPAGVDPMQARIFKFMPIIFGVLFAFFPAGL 502 Query: 539 IIYWSWSNVISIVQQA 554 ++YW ++++S +Q Sbjct: 503 VLYWLVNSLVSALQML 518 >gi|21672847|ref|NP_660912.1| Oxa1/60 kDa IMP family protein [Chlorobium tepidum TLS] gi|38503043|sp|Q8KGG2|OXAA_CHLTE RecName: Full=Inner membrane protein oxaA gi|21645895|gb|AAM71254.1| oxa1/60kDa IMP family protein [Chlorobium tepidum TLS] Length = 590 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 115/583 (19%), Positives = 216/583 (37%), Gaps = 35/583 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRI---EEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ N + AL I+ W F + E+ R+ +Q S A Sbjct: 1 MD--RNSVIGFALIAAIMIVWLQFMKPEQKLGLEKAAASREAVQKTPAAALPAPSAAVAA 58 Query: 58 IDD-------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 ++ + + N +++ KGA L L+ + + N L Sbjct: 59 AARADSLGSFAQASVGTEKTITVSNDLFTATLSSKGATLKSLVLKKH---LDGNRKPFNL 115 Query: 111 LSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 +S S+ L + +L + + V + Sbjct: 116 ISASDKGALSMLFLSSDGKKIDTRDLYFRSLDAKTTETVTGKEKLSVSYVLDVDATRSIQ 175 Query: 170 RTISLDEHYLFKIVDTVTNN--SIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 T + D N S + Sbjct: 176 ITYTFTGDSYVVDYDLKLNGFGSSIAGNEYQLDWDGGLNYSEKDQVDESHNAIASAYLGG 235 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 S+V+ D +K+ W+ + +KY+ + +P + T DG Sbjct: 236 SVVKLDAKDAKKTWQDEESGKAQWVAVRNKYFVAAIMPQRTTDGIYLHGTKKDGSDFKNY 295 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIA 343 + +S+ L+ G ++ T+ D E ++D+GW + F Sbjct: 296 VAALKMSFPAGQQSVDDHYRLYVGPLDYNTVKSLNAD-----LEKIMDFGWDWLTRPFAE 350 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + + ++ V N+G+ I++ +KL+ +PL+ S M +QP + EL+EK+ Sbjct: 351 YLILPIFNWMNKYVTNYGLIIIIFAFLIKLVTWPLSLASTKSMKKMSALQPVMKELQEKY 410 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K +P ++ + ++YK +NPL GC P ++Q+P+ FA++ V S+++R + W+K Sbjct: 411 KDNPAKLQS-ELGRIYKEAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQLRQ-HGFLWVK 468 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW- 522 DL+ D F L H+ I PI+M++++F Q K++P Q I+ W Sbjct: 469 DLSVPDSVYHFAFKLPLYGD-----HIAIMPILMAVTVFFQQKITPNAQSNEQTKIMMWL 523 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P + +F ++ PAGL +Y+ N+ S+ QQA + E Sbjct: 524 FPAMMLFFFNNMPAGLALYYLMFNIFSVAQQAYMNATITDEEK 566 >gi|308183546|ref|YP_003927673.1| putative inner membrane protein translocase component YidC [Helicobacter pylori PeCan4] gi|308065731|gb|ADO07623.1| putative inner membrane protein translocase component YidC [Helicobacter pylori PeCan4] Length = 548 Score = 251 bits (640), Expect = 3e-64, Method: Composition-based stats. Identities = 129/578 (22%), Positives = 225/578 (38%), Gaps = 50/578 (8%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 +AIALS + + + F+ P ++ N+ A Sbjct: 10 RLILAIALSFLFIALYSYFFQKPNKTTTQTTKQETTNNHTTTS-PNAPNAQHFSVTQTIP 68 Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSPSNTKNAYF 121 + + I+ G + + L+ + L S Sbjct: 69 QENLLSTISFEHARIEIDSLG-RIKQVYLKDKKYLTPKEKGFLEHVGHLFSSKENAQPPL 127 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT-----ISLDE 176 EL ++ L L + TP + K ++ + I Sbjct: 128 KELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGALTIIKTL 187 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + + P I A G + DK + + + D Sbjct: 188 TFYDDLHYDLKIAFKSPNNLIPSYVITNGYRPVADLDSYTFSGVLLENTDKKIEKIEDKD 247 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + + +L D+Y+ ++ F + + Sbjct: 248 ---AKEIKRFSNTLFLSSVDRYFTTLLFTKDSQGFEALIDS----------EIGTKNPLG 294 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 T + G K++ ++ P +I++G F AK +F+L+ Y Y Sbjct: 295 FISLKNEATLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLLDYLYQF 349 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+G AI+L T+ V+L+ +PL+ K VS +K + PK+ EL+EK+K PQ LQ M+ Sbjct: 350 VGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQKLQAHMM 408 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ DP Sbjct: 409 QLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSIMDPYF---- 464 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSFP 535 I P++M SM+ ++P D QA I +P++F L +FP Sbjct: 465 ---------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTIFLITFP 509 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 AGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 510 AGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 547 >gi|224372873|ref|YP_002607245.1| putative inner membrane protein translocase component YidC [Nautilia profundicola AmH] gi|223589049|gb|ACM92785.1| inner membrane protein OxaA [Nautilia profundicola AmH] Length = 513 Score = 251 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 134/568 (23%), Positives = 242/568 (42%), Gaps = 63/568 (11%) Query: 1 MERN---WNYFVAIALSVIIVYAWQNFYVYPRIEEMNN-ERKNIQTVKQPNQVDNSYAAV 56 ME N +A +S A+ F + P+ + + +N TVK + +N+ + Sbjct: 1 MENNGQLRRILIATVISFAFFVAYDYFVLTPQQKAASQLVEQNKTTVKTVSNTNNAADKI 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + ++ V KN I+ G + L+ + N + L++ Sbjct: 61 SKKANNENVTTIATVSAKN--FQIKIDSLG-RISSFKLKQTKFNT-ENGKHLELVNDK-- 114 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 E+ + + N + + + L + + + I+ Sbjct: 115 -LPKPLEIRFENKVLNKLAFEKPVKADKTEITLNDKPQTLTLTQNLNDKEIVTKIITFYP 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + +TN + I G + D +L + D Sbjct: 174 DGHYDVKVKLTNPA--------IYYITPGYRPKVAVDKLTIHGLVVKKSDGTLSIIEDGD 225 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 +I N + + D+Y+ ++ K S + A +A Sbjct: 226 AVNETIDNAIITAGF----DRYYTTLLFSKKPYSVIVVPDNEENPVAFIKAD-------- 273 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 + G K T+ +K+ ++ +G F AK +F L+ +FY L Sbjct: 274 -----DNREFIGYIGPKFVDTLAAIDKE-----LVDVVQYGVGTFFAKNLFFLLDWFYKL 323 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 VGN+G+AI+L V V+L+ FPL K VS +K + PK+ E+++K+ + PQ LQ M+ Sbjct: 324 VGNWGVAIILLVVLVRLVLFPLTYKGMVSMYKLKELAPKMKEIQQKY-KKDPQKLQMHMM 382 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK H NPL GC P++LQIPVF+ IYK++ ++E++ A + WIKDL+ DP Sbjct: 383 KLYKEHGANPLGGCLPLILQIPVFYGIYKLLLYAIELKGAS-FLWIKDLSVMDPYF---- 437 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 I P++M +SM+I K++P D Q I ++P++F F +++FP Sbjct: 438 ---------------ILPVLMGVSMYIHQKLTPTNFQDPMQEKIFKFLPLIFTFMMATFP 482 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 AGL++YW+ +N++SI QQ +I ++ ++ Sbjct: 483 AGLVLYWTVNNILSIAQQWLINRIMASK 510 >gi|317178154|dbj|BAJ55943.1| putative inner membrane protein translocase component YidC [Helicobacter pylori F16] Length = 546 Score = 251 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 134/590 (22%), Positives = 236/590 (40%), Gaps = 62/590 (10%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT--VKQPNQVDNSYA 54 M++N N +AIALS + + + F+ P ++ + N+++ Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNKTTTPTTKQETTNNHTATNSNTPNTFS 60 Query: 55 AVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----- 109 + LS + I+ G + + L+ ++ Sbjct: 61 PTQAIPQENLLS-----TISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSH 113 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 L +P EL ++T L L + TP + K ++ Sbjct: 114 LFNPKANVQPLLKELPLLATDKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLT 173 Query: 170 RT-----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + I + + + P I A G + Sbjct: 174 QDLGALTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYRPVADLDSYTFSGVLLEN 233 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 DK + + + D + + +L D+Y+ ++ F + Sbjct: 234 NDKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS------- 283 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + + G K++ ++ P +I++G F AK Sbjct: 284 ---EIGTKNPLGFISLKSEANLHGYIGPKDYLSLKAIS-----PMLTDVIEYGLITFFAK 335 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL+EK+K Sbjct: 336 GVFVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYK 395 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI D Sbjct: 396 G-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHD 454 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+ DP I P++M SM+ ++P D QA I ++ Sbjct: 455 LSIMDPYF-------------------ILPLLMGTSMYWHQSVTPSSVTDPMQAKIFKFL 495 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 P++F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 496 PLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQNKKE 545 >gi|317014863|gb|ADU82299.1| membrane protein insertase [Helicobacter pylori Gambia94/24] Length = 547 Score = 251 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 133/585 (22%), Positives = 227/585 (38%), Gaps = 65/585 (11%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 +AIALS + + + F+ P ++ + A + Sbjct: 10 RLILAIALSFLFIALYSYFFQKPNKPTTETTKQETTNNHATTSPNAPNAQHFSVTQ-TIP 68 Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNTKNAY 120 S + I+ G + + L+ ++ L S Sbjct: 69 QESLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSSKENAQPP 126 Query: 121 FAELDYVSTANNIEL----------PNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 EL ++ L + S L P + L + + + Sbjct: 127 LKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGDLSIIKT 186 Query: 171 TISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 D+ HY KI NN P I A G + DK + Sbjct: 187 LTFYDDLHYDLKIAFKSPNN------LIPSYVITNGYRPVADLDSYTFSGVLLENNDKKI 240 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + + D + + +L D+Y+ ++ F + + Sbjct: 241 EKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDSQGFEALIDS----------EI 287 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + G K++ ++ P +I++G F AK +F+L Sbjct: 288 GTKNPLGFISLKNEADLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVL 342 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + Y Y VGN+G AI+ T+ V+L+ +PL+ K VS +K + PK+ EL+EK+K PQ Sbjct: 343 LDYLYQFVGNWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQ 401 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ D Sbjct: 402 KLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWVLWIHDLSIMD 461 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFV 528 P I P++M SM+ ++P D QA I +P++F Sbjct: 462 PYF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFT 502 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI-DRLRS 572 L +FPAGL++YW+ +N++S++QQ +I K+ + ++ Sbjct: 503 IFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQNIKE 547 >gi|332674216|gb|AEE71033.1| inner membrane protein OxaA [Helicobacter pylori 83] Length = 546 Score = 251 bits (639), Expect = 4e-64, Method: Composition-based stats. Identities = 132/588 (22%), Positives = 231/588 (39%), Gaps = 58/588 (9%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N +AIALS + + + F+ P ++ NS Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFFQKPNKTTTPTTKQETTNNHTAT---NSNTPN 57 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LL 111 + + + I+ G + + L+ ++ L Sbjct: 58 AFNTTQTIPQENLLSAISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLF 115 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 +P EL ++ L L + TP + K ++ + Sbjct: 116 NPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQD 175 Query: 172 -----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 I + + + P I A G + D Sbjct: 176 LGALTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYKPVADLDSYTFSGVLLENND 235 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 K + + + D + + +L D+Y+ ++ F + Sbjct: 236 KKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDSQGFEALIDS--------- 283 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + G K++ ++ P +I++G F AK + Sbjct: 284 -EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGV 337 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL+EK+K Sbjct: 338 FVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKG- 396 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ Sbjct: 397 EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLS 456 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 DP I P++M SM+ ++P D QA I ++P+ Sbjct: 457 IMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFLPL 497 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 498 LFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRTHAQNKKE 545 >gi|268318300|ref|YP_003292019.1| 60 kDa inner membrane insertion protein [Rhodothermus marinus DSM 4252] gi|262335834|gb|ACY49631.1| 60 kDa inner membrane insertion protein [Rhodothermus marinus DSM 4252] Length = 607 Score = 251 bits (639), Expect = 4e-64, Method: Composition-based stats. Identities = 118/583 (20%), Positives = 221/583 (37%), Gaps = 31/583 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPR-----------IEEMNNERKNIQTVKQPNQV 49 M+ N +A L+ +I++ W + P +E ++ I + P Sbjct: 1 MD--RNVVIATILTALIMFVWLWWLAPPPPPPTTAARDSLQQEDTAAQEVIAQEEAPTAP 58 Query: 50 DNSYAAVLIDDRAQALSMSPR---VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 A ++D A + + R + ++ ++ KGA L L+ Y Sbjct: 59 GAPLLAGPLNDTLLAAARNGRARTITIETDLYEAQLSTKGATLVSLKLKKYKQY--DFET 116 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 V L+ + + + T + ++ + + Sbjct: 117 PVQLVDTTKPGALSLVFTTPTNHLVDTRALYFRTATTADTIRVADEPVEVAFEVPVGDGR 176 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 + + L Y ++ + P + A Sbjct: 177 IRQVYTFLPGDYEVRLRVEQEGAATFSTIEGYELVWNGGVPFAERDRDDEARHSGAFARS 236 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF--KYLSDGHAR 284 +E+ D +++ W+ + +K++ +V IPS ET + Sbjct: 237 GGELEKITLDGQRTEEKRLAGQVDWVAVKNKFFTAVMIPSGETRGAELVGERLGEPEDPS 296 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD--LAIPRFEMLIDWGWFYFI 342 Y ++A + P L+ G E+ + Y+ + +W Sbjct: 297 YWEDYAARLLMPRPEDGQVDEFRLYLGPMEYFRLARYDLGLYDMVDYGWDAFEWMTRPLA 356 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 L + L+GN+G+AI++ + VK+ +PL + + + A M+ +QP+++ +REK Sbjct: 357 KFVFIPLFTLLGRLLGNYGLAIIVFALLVKIALYPLTRASFRNMAKMRELQPELEAIREK 416 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + +P Q Q+A+++LY+ INPL GC P+LLQ PV A+++ SL +R + W Sbjct: 417 YADNP-QKQQEALMKLYREKKINPLGGCLPMLLQWPVLIALWQYFQQSLIVRQQ-AFLWA 474 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQAMILN 521 KDL+A DP I L +P Y V + ++M LSM IQM++ S Q IL Sbjct: 475 KDLSAPDP--ILHLPFKIPLYG---DFVAGFTLLMGLSMIIQMRIQSASTPSNPQTKILT 529 Query: 522 W-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + PV + + L +Y+ N+ S +QQ I + E Sbjct: 530 YVFPVFIFAIFNRLSSALNLYYLCYNIFSAIQQFWINRSLEKE 572 >gi|207091817|ref|ZP_03239604.1| putative inner membrane protein translocase component YidC [Helicobacter pylori HPKX_438_AG0C1] Length = 546 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 128/579 (22%), Positives = 226/579 (39%), Gaps = 54/579 (9%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 +AIALS + + + F+ P ++ + A Q Sbjct: 10 RLILAIALSFLFIALYSYFFQKPNKTTTQTTKQETTNNHTATSPNAPNAFSATQTIPQEN 69 Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNTKNAY 120 +S + I+ G + + L+ ++ L S Sbjct: 70 LLSA---ISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSSKENAQPP 124 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT-----ISLD 175 EL ++ L L + TP + K ++ + I Sbjct: 125 LKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGTLTIIKT 184 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + + + P I A G + DK + + + Sbjct: 185 LTFYDDLHYDLKIAFKSPNNLIPSYVITNGYRPVADLDSYTFSGVLLENNDKKIEKIEDK 244 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D + + +L D+Y+ ++ F + + Sbjct: 245 D---AKEIKRFSNTLFLSSVDRYFTTLLFTKDSQGFEALIDS----------EIGTKNPL 291 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G K++ ++ P +I++G F AK +F+L+ Y Y Sbjct: 292 GFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLLDYLYQ 346 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G AI+L T+ V+++ +PL+ K VS +K + PK+ EL+EK+K PQ LQ M Sbjct: 347 FVGNWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQKLQAHM 405 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ DP Sbjct: 406 MQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSIMDPYF--- 462 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSF 534 I P++M SM+ ++P D QA I +P++F L +F Sbjct: 463 ----------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTIFLITF 506 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 PAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 507 PAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545 >gi|220919593|ref|YP_002494897.1| YidC translocase/secretase [Anaeromyxobacter dehalogenans 2CP-1] gi|254772745|sp|B8JDK5|OXAA_ANAD2 RecName: Full=Inner membrane protein oxaA gi|219957447|gb|ACL67831.1| YidC translocase/secretase [Anaeromyxobacter dehalogenans 2CP-1] Length = 546 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 118/560 (21%), Positives = 214/560 (38%), Gaps = 33/560 (5%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N +A LSV I+ WQ + + + K + A A Sbjct: 4 DNRRILLATVLSVGILILWQVIFPTKKAPPKPAHPPAAEVAKPAAPASPAPGAAAPAVPA 63 Query: 63 QALSM-SPRVELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTKNA 119 V L ++ G L L + + L+ + Sbjct: 64 PPPDAPEETVTLAGKGFEATLTTYGGALKSLRLEGDKFRKQEKDREVQIDLVH-VTSGQP 122 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 Y L ++ + + + + N + + Y Sbjct: 123 YPLSLSASPELGGAVDVAADPGARAPMRIVANDASSVTFEGRVGNLAARKTFRVTGKPYE 182 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + ++ + M ++ G F+ + +++ ++ Sbjct: 183 LALDVELSGGAGSGTVGVLYPAFMPPDTKSGGIFSGPPLDFVRPVCRAGTTTERFDLAKE 242 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + SW G+ Y+ + +P++ + + G + G Sbjct: 243 GAPEKLEGQVSWAGVDQHYFVAAVLPAEPIGTCTFVRGPVKGAGLAAVAV------PVEG 296 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + + ++AG K+ T+ Y + + +F A+ + +M + +V N Sbjct: 297 GARKLSLTVYAGPKDLDTLRGYGRGF-ESAIDYGAVAKFFALFARGLLYVMRWLEAIVRN 355 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G+AI+L TV V+L+ FPL K S M+ +QP+I++L+ KF ++ A++QLY Sbjct: 356 WGVAIILLTVLVRLVLFPLTYKSMQSMNEMRKLQPEIEKLKAKFGDDREKMNL-AVMQLY 414 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 + H +NPL GC P+LLQ+PV+FA+Y + S+E+ P + W+KDL A DP Sbjct: 415 QKHKVNPLGGCLPMLLQMPVWFALYAALQTSVELYREP-FLWMKDLTAHDPYF------- 466 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMPVVFVFALSSFPAGL 538 I PI M +S F+ K+SP PAD QA ++ + P F + P GL Sbjct: 467 ------------ILPIAMGISSFVMQKLSPQPADNAQAKMMLYFFPGFFTVIMLFVPGGL 514 Query: 539 IIYWSWSNVISIVQQAVIMK 558 +Y +N++SIVQQ ++MK Sbjct: 515 TLYIFVNNLLSIVQQQLMMK 534 >gi|307638101|gb|ADN80551.1| Inner membrane protein translocase component [Helicobacter pylori 908] gi|325996702|gb|ADZ52107.1| Inner membrane protein translocase component [Helicobacter pylori 2018] gi|325998294|gb|ADZ50502.1| putative inner membrane protein translocase component [Helicobacter pylori 2017] Length = 547 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 133/584 (22%), Positives = 227/584 (38%), Gaps = 63/584 (10%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 +AIALS + + + F+ P ++ N+ A Sbjct: 10 RLILAIALSFLFIALYSYFFQKPNKPTTETTKQETTNNHT-TISPNAPNAQHFSVTQTIP 68 Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSPSNTKNAYF 121 S + I+ G + + L+ + L S Sbjct: 69 QESLLSTISFEHARIEIDSLG-RIKQVYLKDKKYLTPKEKGFLEHVGHLFSSKENSQPSL 127 Query: 122 AELDYVSTANNIEL----------PNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 EL ++ L + S L P + L + + Sbjct: 128 KELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGVLSIIKTL 187 Query: 172 ISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 D+ HY KI +NN P I A G + DK + Sbjct: 188 TFYDDLHYDLKIAFKSSNN------LIPSYVITNGYRPVADLDSYTFSGVLLENNDKKIE 241 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + D + + +L D+Y+ ++ F + + Sbjct: 242 KIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS----------EIG 288 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 + G K++ ++ P +I++G F AK +F+L+ Sbjct: 289 TKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLL 343 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 Y Y VGN+G AI+ T+ V+++ +PL+ K VS +K + PK+ EL+EK+K PQ Sbjct: 344 DYLYQFVGNWGWAIIFLTIIVRIVLYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQK 402 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ DP Sbjct: 403 LQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWVLWIHDLSIMDP 462 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVF 529 I P++M SM+ ++P D QA I +P++F Sbjct: 463 YF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTI 503 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI-DRLRS 572 L +FPAGL++YW+ +N++S++QQ +I K+ + + ++ Sbjct: 504 FLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRVHAQNIKE 547 >gi|108563801|ref|YP_628117.1| putative inner membrane protein translocase component YidC [Helicobacter pylori HPAG1] gi|107837574|gb|ABF85443.1| 60 kDa inner-membrane protein [Helicobacter pylori HPAG1] Length = 548 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 128/579 (22%), Positives = 225/579 (38%), Gaps = 52/579 (8%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 +AIALS + + + F+ P ++ N+ A Sbjct: 10 RLILAIALSFLFIAIYSYFFQKPNKTTTQTTKQETTNNHTATS-PNAPNAQHFSVTQTIP 68 Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNTKNAY 120 + + I+ G + + L+ ++ L SP Sbjct: 69 QENLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSPKANPQNL 126 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT-----ISLD 175 EL ++ L L + TP + K ++ + I Sbjct: 127 LKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGTLTIIKT 186 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + + + P I A G + DK + + + Sbjct: 187 LTFYDDLHYDLQIAFKSPNNIIPSYVITNGYRPVADLDSYTFSGVLLENNDKKIEKIEDK 246 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D + + +L D+Y+ ++ F + + Sbjct: 247 D---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS----------EIGTKNPL 293 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G K++ ++ P +I++G F AK +F+L+ Y Y Sbjct: 294 GFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLLDYLYQ 348 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G AI+ T+ V+L+ +PL+ K VS +K + PK+ EL+EK+K PQ LQ M Sbjct: 349 FVGNWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELSPKMKELQEKYKG-EPQKLQAHM 407 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ DP Sbjct: 408 MQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSIMDPYF--- 464 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSF 534 I P++M SM+ ++P D QA I +P++F L +F Sbjct: 465 ----------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTIFLITF 508 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 PAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 509 PAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 547 >gi|254444960|ref|ZP_05058436.1| 60Kd inner membrane protein [Verrucomicrobiae bacterium DG1235] gi|198259268|gb|EDY83576.1| 60Kd inner membrane protein [Verrucomicrobiae bacterium DG1235] Length = 605 Score = 249 bits (635), Expect = 8e-64, Method: Composition-based stats. Identities = 121/598 (20%), Positives = 228/598 (38%), Gaps = 48/598 (8%) Query: 2 ERNWNYFVAIALSVI-IVYAW-------QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53 N + ++L V+ + + Q + + + + + + Sbjct: 1 MDKKNTIIGVSLLVVGTILMFKNSQQRQQQAFEERQAAQESAPAQTAPAQTYDGDTPSPS 60 Query: 54 AAVLIDDRAQAL--------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 A + A+ + V L+N G ++ L+ + Sbjct: 61 APIPSATTPTAVVANGHAQIEIDEQKTGEQFVSLENDDFEVRFTNYGGAIKEVELKKHRK 120 Query: 100 DVSSNSPIV---TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 + S V +P+ Y + V+ + + + G+ L T Sbjct: 121 ALDSEENYVMNRLRYAPALDLTTYLGDAKNVAFDILPSSGRDSVSFRGVIGEQLEVTRTY 180 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 + F L L + + ++ +P G + + Sbjct: 181 TISQDPEGPATFTIVHDLQLRNLTDGLLPLGELLLNIGTVAPSG--SQDRFLQTFGYSNG 238 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF----H 272 + D + + +S W + ++++ ++ P + + Sbjct: 239 DDVEFTDQSDFMGGGIPFFKKTPKDLVQASDSVVWASVKNQFFITLLTPEEPAAGYIARP 298 Query: 273 SQFKYLSDGHARYQA---KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 F ++ I + G S+T +AG KEF I +K Sbjct: 299 VDFPSDAENAEPKTGLTGDVRLAAINLPAGASVTKRFDFYAGPKEFTRIGKLDKGQ---- 354 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E + +G+F I+K + +M+ +VGN+G+AI+L T+ V+ P+ S M Sbjct: 355 -EQAMQFGFFGIISKFLLQIMNGIQGVVGNWGVAIILLTLIVRGALLPITLLSMKSMKKM 413 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +Q + L+EKF Q Q+ M++LYK + INP+AGC P+LLQIP+FFA++ ++ Sbjct: 414 SKLQEPMKALKEKFPD-DTQKQQQHMMELYKLNKINPVAGCLPMLLQIPIFFALFYMLRS 472 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + E+R A + WI DL+ D F IL G + + P + +++ QM P Sbjct: 473 AAELRFA-DFLWISDLSKPDTIATIPNFPIL-----GDFALNLLPFVWVITLAYQMWTMP 526 Query: 510 PPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 P+ D QA ++ +MP +F F +GL++YW+ SNV +I QQ ++ K G E + Sbjct: 527 TPSVDNAQAKMMKFMPFIFFPFTYMFSSGLVLYWTVSNVFTIGQQWLV-KRGGDEFEV 583 >gi|194335113|ref|YP_002016973.1| 60 kDa inner membrane insertion protein [Prosthecochloris aestuarii DSM 271] gi|254773012|sp|B4S6X1|OXAA_PROA2 RecName: Full=Inner membrane protein oxaA gi|194312931|gb|ACF47326.1| 60 kDa inner membrane insertion protein [Prosthecochloris aestuarii DSM 271] Length = 584 Score = 249 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 110/571 (19%), Positives = 224/571 (39%), Gaps = 30/571 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + + L +I+ W F + + ++ + ++ + V + AA + Sbjct: 1 MD--RNSVIGLVLISLIMIVWMQFMAPEKKPLQDIDKPAVSLQEEVSPVSDIPAAAATPE 58 Query: 61 R-----AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 A + + + N ++ +GA + L+ + ++ Sbjct: 59 SYGEFSAMSDGEEKLLTVDNEYFTAVLSSRGATLKSMMLKKHLDSSREQFNLIRKNDSGA 118 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + + ++ + T + G + +L NI+ T S D Sbjct: 119 LSLFFLTQAGKQIDTRDLYFSTAVTESQVTVGADNQFSVTYRLDVAPEKNIVITYTFSGD 178 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSLVEQ 232 + I ++ N ++ + + + A SL++ Sbjct: 179 SYA---IGYDISMNGFASEIAGNEFQLQWDGGLVHSEKNDDDELHNSWAAAYMGGSLLKL 235 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 SD K+ W+ KY+ + IPS ET G + Sbjct: 236 DASDQSKTYREEQSGVAGWVAARTKYFVAAMIPSSETEGVYLAGKRLAGEPFENYTTALK 295 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMFM 348 S + L+ G ++ ++ + E ++D+GW + F + Sbjct: 296 FRVPSDESSFKESLRLYVGPIDYNVLNALGVN-----LEKIMDFGWDWLTRPFAEYIILP 350 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 + +GN+G+ I++ +KL+ +PL S M +QP + E++EK+K +P Sbjct: 351 IFDLLNKFIGNYGLIIIIFAFLIKLVTYPLTMASTKSMKKMSALQPMMKEIQEKYKDNPA 410 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 ++ + ++YK +NPL GC P++LQ+P+ FA++ V S+++R + W DL+ Sbjct: 411 KLQS-ELGRIYKEAGVNPLGGCLPVVLQMPLLFAMFYVFRSSIQLRQ-HGFLWANDLSVP 468 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMPVVF 527 D +I +P Y H+ ++PI+M++++F+Q K++P Q + PV+ Sbjct: 469 D--SILDFGFSIPLYG---DHIALFPILMAVAVFLQQKITPTAQTNDQMKAMIYIFPVMM 523 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + ++ PAGL +Y+ NV SI Q I K Sbjct: 524 LLFFNNMPAGLGLYYLMFNVFSIAQTWYINK 554 >gi|331007812|ref|ZP_08330917.1| OxaI/YidC membrane insertion protein [gamma proteobacterium IMCC1989] gi|330418379|gb|EGG92940.1| OxaI/YidC membrane insertion protein [gamma proteobacterium IMCC1989] Length = 285 Score = 249 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 110/310 (35%), Positives = 180/310 (58%), Gaps = 26/310 (8%) Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 + Y+ S ++P+ ET+ + LS G Y FS +T+ G+ + + + G K Sbjct: 1 MIQHYFVSAWVPNSETNNSYSLRKLS-GKDIYLLGFSTPALTVAAGQQGSVSAGFYVGPK 59 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + + P ++ ID+G+ ++IAKP+F L+ +++VGN+G +I++ T+F+K+ Sbjct: 60 DIDRLEAIA-----PYLDLTIDFGFLWWIAKPIFHLLIMIHDVVGNWGWSIIVLTLFIKI 114 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 +FF + Y S A M+ + PK+ L+E+F Q + + M+++YKT +NP+ GC PI Sbjct: 115 VFFYPSAVSYRSMARMRKLSPKMALLKERFGDDK-QKMSQEMMKMYKTEKVNPMGGCLPI 173 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+PVF ++Y V+ S+E+RHAPF WI DL+ DP ++ Sbjct: 174 LIQMPVFISLYWVLMESVELRHAPFALWITDLSVKDPYF-------------------VF 214 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P+IM ++M+IQ K++P P D QA I+ WMPV F F FPAGL+IYW +N +SI+QQ Sbjct: 215 PLIMGVTMYIQQKLNPTPPDPMQAKIMQWMPVAFTFMFLWFPAGLVIYWVTNNTLSIIQQ 274 Query: 554 AVIMKMHGAE 563 +I + AE Sbjct: 275 YIITRRIEAE 284 >gi|317181133|dbj|BAJ58919.1| putative inner membrane protein translocase component YidC [Helicobacter pylori F32] Length = 546 Score = 249 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 132/588 (22%), Positives = 230/588 (39%), Gaps = 58/588 (9%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N +AIALS + + + F+ + Q + NS Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFF---QKPNQTTTPTTKQETTNNHTATNSNTPN 57 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LL 111 + + I+ G + + L+ ++ L Sbjct: 58 AFSATQTIPQENLLSAISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLF 115 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 +P EL ++ L L + TP + K ++ + Sbjct: 116 NPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQD 175 Query: 172 -----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 I + + + P I A G + D Sbjct: 176 LGALTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYRPVADLDSYTFSGVLLENND 235 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 K + + + D + + +L D+Y+ ++ F + Sbjct: 236 KKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS--------- 283 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + G K++ ++ P +I++G F AK + Sbjct: 284 -EIGTKNPLGFISLKSEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGV 337 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL+EK+K Sbjct: 338 FVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKD- 396 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ Sbjct: 397 EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLS 456 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 DP I P++M SM+ ++P D QA I ++P+ Sbjct: 457 IMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFLPL 497 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 498 LFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRAHAQNKKE 545 >gi|308185213|ref|YP_003929346.1| putative inner membrane protein translocase component YidC [Helicobacter pylori SJM180] gi|308061133|gb|ADO03029.1| putative inner membrane protein translocase component YidC [Helicobacter pylori SJM180] Length = 548 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 126/579 (21%), Positives = 225/579 (38%), Gaps = 52/579 (8%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 +AIALS + + + F+ P ++ N+ A Sbjct: 10 RLILAIALSFLFITLYSYFFQKPNKTTTETTKQETTNNHTTTS-PNAPNAQHFSVTQTIP 68 Query: 66 SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNTKNAY 120 + + I+ G + + L+ ++ L S Sbjct: 69 QENLLSTISFEHARIEIDFLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSSKENAQPP 126 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT-----ISLD 175 EL ++ L L + TP + K ++ + I Sbjct: 127 LKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGALSIIKT 186 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + + + P I A G + DK + + + Sbjct: 187 LTFYDDLHYDLKIAFKSPNNLIPSYVITNGYRPVADLDSYTFSGVLLENNDKKIEKIEDK 246 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D + + +L D+Y+ ++ F + + Sbjct: 247 D---AKEIKRFSNTLFLSSVDRYFTTLLFTKDSQGFEALIDS----------EIGTKNPL 293 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G K++ ++ P +I++G F AK +F+L+ Y Y Sbjct: 294 GFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLLDYLYQ 348 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G AI+ T+ V+++ +PL+ K VS +K + PK+ EL+EK+K PQ LQ M Sbjct: 349 FVGNWGWAIIFLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQKLQAHM 407 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ DP Sbjct: 408 MQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSIMDPYF--- 464 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSF 534 I P++M SM+ ++P D QA I ++P++F L +F Sbjct: 465 ----------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKFLPLLFTIFLITF 508 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 PAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 509 PAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 547 >gi|217033919|ref|ZP_03439343.1| hypothetical protein HP9810_870g51 [Helicobacter pylori 98-10] gi|216943682|gb|EEC23127.1| hypothetical protein HP9810_870g51 [Helicobacter pylori 98-10] Length = 546 Score = 248 bits (633), Expect = 2e-63, Method: Composition-based stats. Identities = 133/588 (22%), Positives = 232/588 (39%), Gaps = 58/588 (9%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N +AIALS + + + F+ + Q + NS A Sbjct: 1 MDKNNNTNIRLILAIALSFLFIALYSYFF---QKPNQTTTPTTKQETTNNHTATNSNAPN 57 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LL 111 + + + I+ G + + L+ ++ L Sbjct: 58 AFNTTQTIPQENLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLF 115 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 +P EL ++ L L + TP + K ++ + Sbjct: 116 NPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQD 175 Query: 172 -----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 I + + + P I A G + D Sbjct: 176 LNTLTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYKPVADLDSYTFSGVLLENND 235 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 K + + + D + + +L D+Y+ ++ F + Sbjct: 236 KKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS--------- 283 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + G K++ ++ P +I++G F AK + Sbjct: 284 -EIGTKNPLGFISFKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGV 337 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL+EK+K Sbjct: 338 FVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKG- 396 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ Sbjct: 397 EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLS 456 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 DP I P++M SM+ ++P D QA I ++P+ Sbjct: 457 IMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFLPL 497 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 498 LFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILENKKRAHAQSKKE 545 >gi|212704368|ref|ZP_03312496.1| hypothetical protein DESPIG_02423 [Desulfovibrio piger ATCC 29098] gi|212672206|gb|EEB32689.1| hypothetical protein DESPIG_02423 [Desulfovibrio piger ATCC 29098] Length = 423 Score = 248 bits (633), Expect = 2e-63, Method: Composition-based stats. Identities = 122/450 (27%), Positives = 193/450 (42%), Gaps = 46/450 (10%) Query: 132 NIELPNSNTVWNLISGK----ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVT 187 N + S W L S ++LV + N + E+YL ++ Sbjct: 8 NGQPSWSTGKWALESDSGVSVAEGGKGVVRLVGEVDNLRVTRELTFNSENYLISEKVSLA 67 Query: 188 NNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE 247 D R + A + +A SL E+ +D Sbjct: 68 TLGTDTRSVRVRYTVAADTSNAANTNYDA--MRVAWDNGGSLGEETSTDKLTKEGVEASG 125 Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 W G Y+ S +P + Y+ E+ + PG+ T Sbjct: 126 KLYWAGPMSTYFLSAVMPGDADEARMVGRMQGS---VYRVALEPKEVVVAPGQETTLEVS 182 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 + G KE + + +D G F IAK + L+ +F N+G++I++ Sbjct: 183 YWMGPKERKMLAAVSDQ-----LALSVDLGMFSIIAKGLLWLLEFFQQYTHNWGLSIIML 237 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 T+ +K +F+PL K Y S MK +QP + +REK+K + K ++ LYKT+ +NP Sbjct: 238 TIVIKAVFWPLTAKSYSSMEKMKKLQPMMANIREKYKDDKE-AMNKEVMALYKTYGVNPA 296 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------GWIKDLAAADPTNIFTLFGI 479 +GC PIL+Q+PVFF +Y+ + S+E+RHAPF W+ DL++ DP Sbjct: 297 SGCVPILVQLPVFFGLYQALLTSIELRHAPFITYLPGTDLIWLADLSSKDPYY------- 349 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 I PIIM ++MF+Q KMSPP D Q I+ ++P+VF SFP+GL+ Sbjct: 350 ------------ITPIIMGITMFLQQKMSPPATDPTQQKIMMFLPIVFTALFLSFPSGLV 397 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 +YW +N++SI QQ G L+ + Sbjct: 398 VYWLVNNILSIAQQW----RMGRRSKLLAQ 423 >gi|213580793|ref|ZP_03362619.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 317 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 104/329 (31%), Positives = 181/329 (55%), Gaps = 28/329 (8%) Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ + Sbjct: 1 KYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAIGYK 58 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F L+ Sbjct: 59 AQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLL 113 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Q Sbjct: 114 KWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK-QR 172 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A DP Sbjct: 173 QSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSAQDP 232 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 233 YY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTV 273 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 274 FFLWFPSGLVLYYIVSNLVTIIQQQLIYR 302 >gi|15612408|ref|NP_224061.1| putative inner membrane protein translocase component YidC [Helicobacter pylori J99] gi|38503266|sp|Q9ZJG8|OXAA_HELPJ RecName: Full=Inner membrane protein oxaA gi|4155955|gb|AAD06920.1| putative Inner membrane protein [Helicobacter pylori J99] Length = 549 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 127/579 (21%), Positives = 222/579 (38%), Gaps = 51/579 (8%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 +AIALS + + + F+ P ++ S Q + Sbjct: 10 RLILAIALSFLFIALYSYFFQEPNKTTTETTKQETTNNHTATSPTASNTITQDFSVTQTI 69 Query: 66 SMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLSPSNTKNAY 120 + + I+ G + + L+ + L S Sbjct: 70 PQESLLSTISFEHAKIEIDSLG-RIKQVYLKDKKYLTPKEKGFLEHVSHLFSSKENSQPS 128 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT-----ISLD 175 EL ++ L L + TP + K ++ + I Sbjct: 129 LKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGTLSIIKT 188 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + + + P I A G + DK + + + Sbjct: 189 LTFYDDLHYDLKIAFKSPNNLIPSYVITNGYRPVADLDSYTFSGVLLENTDKKIEKIEDK 248 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D + + +L D+Y+ ++ F + + Sbjct: 249 D---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS----------EIGTKNPL 295 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G K++ ++ P +I++G F AK +F+L+ Y Y Sbjct: 296 GFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLLDYLYQ 350 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 VGN+G AI+L T+ V+++ +PL+ K VS +K + PK+ EL+EK+K PQ LQ M Sbjct: 351 FVGNWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQKLQAHM 409 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 +QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ DP Sbjct: 410 MQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWVLWIHDLSIMDPYF--- 466 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSF 534 I P++M SM+ ++P D QA I +P++F L +F Sbjct: 467 ----------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTIFLITF 510 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI-DRLRS 572 PAGL++YW+ N++S++QQ +I K+ + ++ Sbjct: 511 PAGLVLYWTTHNILSVLQQLIINKVLENKKRAHAQNIKE 549 >gi|208435316|ref|YP_002266982.1| 60 kDa inner-membrane protein [Helicobacter pylori G27] gi|208433245|gb|ACI28116.1| 60 kDa inner-membrane protein [Helicobacter pylori G27] Length = 548 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 129/577 (22%), Positives = 225/577 (38%), Gaps = 52/577 (9%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 +AIALS + + + F+ P ++ N+ A Sbjct: 12 ILAIALSFLFIALYSYFFQKPNKTTTQTTKQETTNNHTATS-PNAPNAQNFGTTQTIPQE 70 Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNTKNAYFA 122 S + I+ G + + L+ ++ L S Sbjct: 71 SLLSAISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSSKENAQPPLK 128 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT-----ISLDEH 177 EL ++ L L + TP + K ++ + I Sbjct: 129 ELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGALIIIKTLT 188 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 + + + P I A G + DK + + + D Sbjct: 189 FYDDLHYDLKIAFKSPNNLIPSYVITNGYRPVADLDSYTFSGVLLENNDKKIEKIEDKD- 247 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + +L D+Y+ ++ F + + Sbjct: 248 --AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS----------EIGTKNPLGF 295 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 + G K++ ++ P +I++G F AK +F+L+ Y Y V Sbjct: 296 ISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLLDYLYQFV 350 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G AI+L T+ V+L+ +PL+ K VS +K + PK+ EL+EK+K PQ LQ M+Q Sbjct: 351 GNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQKLQAHMMQ 409 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ DP Sbjct: 410 LYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSIMDPYF----- 464 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSFPA 536 I P++M SM+ ++P D QA I +P++F L +FPA Sbjct: 465 --------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTIFLITFPA 510 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 GL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 511 GLVLYWTTNNILSVLQQLIINKILENKKRMHAQNKKE 547 >gi|210135616|ref|YP_002302055.1| putative inner membrane protein translocase component YidC [Helicobacter pylori P12] gi|210133584|gb|ACJ08575.1| inner membrane protein translocase component [Helicobacter pylori P12] Length = 546 Score = 247 bits (631), Expect = 3e-63, Method: Composition-based stats. Identities = 128/577 (22%), Positives = 226/577 (39%), Gaps = 54/577 (9%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 +AIALS + + + F+ P ++ + A Q + Sbjct: 12 ILAIALSFLFIAIYSYFFQKPNKSTTQTTKQETTNNHTATSSNAPNAFNATQTIPQENLL 71 Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNTKNAYFA 122 S + I+ G + + L+ ++ L +P Sbjct: 72 S---TISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFNPKANPQTPLK 126 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT-----ISLDEH 177 EL ++ L L + TP + K ++ + I Sbjct: 127 ELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLNTLTIIKTLT 186 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 + + + P I A G + DK + + + D Sbjct: 187 FYDDLHYDLKIAFKSPNNIIPSYVITNGYRPVADLDSYTFSGVLLENNDKKIEKIEDKD- 245 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + +L D+Y+ ++ F + + Sbjct: 246 --AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS----------EIGTKNPLGF 293 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 + G K++ ++ P +I++G F AK +F+L+ Y Y V Sbjct: 294 ISLKNEADLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGVFVLLDYLYQFV 348 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 GN+G AI+ T+ V+L+ +PL+ K VS +K + PK+ EL+EK+K PQ LQ M+Q Sbjct: 349 GNWGWAIIFLTIIVRLILYPLSYKGMVSMQKLKELAPKMKELQEKYKG-EPQKLQAHMMQ 407 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ DP Sbjct: 408 LYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLSIMDPYF----- 462 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFVFALSSFPA 536 I P++M SM+ ++P D QA I +P++F L +FPA Sbjct: 463 --------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFTIFLITFPA 508 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 GL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 509 GLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545 >gi|86150679|ref|ZP_01068900.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596386|ref|ZP_01099623.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 84-25] gi|218562577|ref|YP_002344356.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|38503224|sp|Q9PNX7|OXAA_CAMJE RecName: Full=Inner membrane protein oxaA gi|85838860|gb|EAQ56128.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191227|gb|EAQ95199.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 84-25] gi|112360283|emb|CAL35078.1| putative membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926191|gb|ADC28543.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. jejuni IA3902] gi|315928512|gb|EFV07816.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp. jejuni 305] Length = 528 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 142/564 (25%), Positives = 258/564 (45%), Gaps = 55/564 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRI--EEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 + +A+ +S + + F++ + E N +KN Q N + A Sbjct: 9 QQKRILLAVVISFLFFVIYDYFFIPKQPLKIEQNITQKNQQNTSINNTPNIQNATTNTPS 68 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A S ++++ I+ G + L+ + + L+S N+ Y Sbjct: 69 AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKD-RKYQNEKGEFINLVSKENS--PY 124 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E+ + + N E V N + + + + + +N + + E+ I+ + Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLTQNLSGLKIEKDITFYPKGNY 184 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 +I ++ N+ ++P A +++ V + + +++ K D+EK Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNKETIETYKDGDVEKD 236 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 +N S D+Y+A+ F +K + + Sbjct: 237 ESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAISKDANQNPIVFAYS 281 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + G+KE + + PR E ++++GWF FIAKPMF +++ + +GN+ Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNW 336 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K PQ + M++LYK Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539 I PI+M +MF+Q ++P D QA I+ ++PV+F F +FPAGL Sbjct: 448 -----------ILPILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLT 496 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW +N+ S+VQQ VI K+ E Sbjct: 497 LYWFVNNLCSLVQQWVINKIFAKE 520 >gi|33519495|ref|NP_878327.1| putative preprotein translocase subunit YidC [Candidatus Blochmannia floridanus] gi|38502910|sp|Q7U351|OXAA_BLOFL RecName: Full=Inner membrane protein oxaA gi|33517158|emb|CAD83540.1| Preprotein translocase subunit YidC [Candidatus Blochmannia floridanus] Length = 558 Score = 247 bits (630), Expect = 4e-63, Method: Composition-based stats. Identities = 135/560 (24%), Positives = 245/560 (43%), Gaps = 51/560 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME ++F+ + L V + W+ + I +N E N + QP + + + Sbjct: 1 MESQRSFFIIVFLIVSFIL-WKIWDDEHHINLLNIE--NNHSTLQPYSIQSHESNQNTPI 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 S + +K + IN ++ L Y +++S P+ L + K Sbjct: 58 THTNNPYSHIITIKTDVFLLKINTYSGNIEEAYLNNYQENLNSQKPLKLLHTSKENKYQA 117 Query: 121 FAELD----YVSTANNIELPNSNTVWNLISGK------ILTPTTPIKLVFKNANNILFER 170 + +++ Y + N + ++ + + L ++ NNI++ + Sbjct: 118 YIDIETLNEYFTNDLNQKNKKHYLYYSNTTNQCEYILKNNENKLQFDLTYQGPNNIIYTK 177 Query: 171 TISLDEHYL-FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-------TFGVQEGFIA 222 L+ + I + N S I G +++ + Sbjct: 178 RYLLNRNDYSIYITYIIDNQSTYPIHIKLYGNLIQSIHSDVIQSKHNDHCPLYTYQEAAY 237 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + DI+ ++++ H +N W+ + KY+ +P YL++ Sbjct: 238 STDTEKYQKYNLKDIKHTNLN-IHSTNGWIALLQKYFIIALLPITPKDNTFYTTYLNN-- 294 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 F ++ I I PGK + L+ G K + P +++ID+GW +FI Sbjct: 295 HDISIGFKSDFIHIPPGKKNELQSILWMGPKIQDNMKLVA-----PNLDLVIDYGWLWFI 349 Query: 343 AKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + P+F L+ + + + N+GI+I+L TV ++L+ +PL K QY S A ++ +QPK+ ++E Sbjct: 350 SHPLFKLLQFIHTYTIDNWGISIILITVIIRLIMYPLTKAQYTSMAKIRMLQPKLISIQE 409 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 ++K Q + I+LYK +NPL GC P+L+Q+P+F A+Y ++S S+E+RHA F W Sbjct: 410 EYKHDKYQ-YHQKTIELYKKEKVNPLGGCLPLLIQMPIFLALYYMLSESVELRHAKFAFW 468 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL 520 IKDL+ DP I PIIM ++MF K+SP D Q I+ Sbjct: 469 IKDLSDQDPYY-------------------ILPIIMGITMFFIQKLSPTTITDPIQKKIM 509 Query: 521 NWMPVVFVFALSSFPAGLII 540 N M V+F FP+GL++ Sbjct: 510 NIMLVIFTIFFLWFPSGLVL 529 >gi|197124875|ref|YP_002136826.1| hypothetical protein AnaeK_4495 [Anaeromyxobacter sp. K] gi|254772746|sp|B4UKG1|OXAA_ANASK RecName: Full=Inner membrane protein oxaA gi|196174724|gb|ACG75697.1| 60 kDa inner membrane insertion protein [Anaeromyxobacter sp. K] Length = 546 Score = 247 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 119/560 (21%), Positives = 220/560 (39%), Gaps = 33/560 (5%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N +A LSV I+ WQ + ++ + K + A A Sbjct: 4 DNRRILLATVLSVGILILWQVIFPTKKVPPKPAPPPAAEVAKPAAPASPAPGAAAPAVPA 63 Query: 63 QALSM-SPRVELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVTLLSPSNTKNA 119 V+L ++ G L L + + L+ ++ + Sbjct: 64 PPPDAPEETVKLAGKGFEATLTTYGGALKSLRLEGDKFRKQEKDREVQIDLVHVTDGQ-P 122 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 Y L ++ + + + + N + + Y Sbjct: 123 YPLSLSASPELGGAADVAADPGARAPMRIVAKDASSVTFEGRVGNLAARKTFRVTGKPYE 182 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + ++ + + M ++ G F+ + +++ ++ Sbjct: 183 LALDVELSGGAGNGTVGVLYPAFMPPDTKSGGIFSGPPLDFVRPVCRAGTTTERFDLAKE 242 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + SW G+ Y+ + +P++ + + G A + G Sbjct: 243 GAPEKLEGQVSWAGVDQHYFVAAVLPAEPIGTCTFVRGPVKGAGL------AALAVPVEG 296 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + + ++AG K+ T+ Y + + +F A+ + +M + +V N Sbjct: 297 GARKLSLTVYAGPKDLDTLRGYGRGF-ESAIDYGAVAKFFALFARGLLYVMRWLEAIVRN 355 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G+AI+L TV V+L+ FPL K S M+ +QP+I++L+ KF ++ A++QLY Sbjct: 356 WGVAIILLTVLVRLVLFPLTYKSMQSMNEMRKLQPEIEKLKAKFGDDREKMNL-AVMQLY 414 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 + H +NPL GC P+LLQ+PV+FA+Y + S+E+ P + W+KDL A DP Sbjct: 415 QKHKVNPLGGCLPMLLQMPVWFALYAALQTSVELYREP-FLWMKDLTAHDPYF------- 466 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMPVVFVFALSSFPAGL 538 I PI M +S F+ K+SP PAD QA ++ + P F + P GL Sbjct: 467 ------------ILPIAMGISSFVMQKLSPQPADNAQAKMMLYFFPGFFTVIMLFVPGGL 514 Query: 539 IIYWSWSNVISIVQQAVIMK 558 +Y +N++SIVQQ ++MK Sbjct: 515 TLYIFVNNLLSIVQQQLMMK 534 >gi|222823561|ref|YP_002575135.1| 60 kDa inner-membrane protein [Campylobacter lari RM2100] gi|222538783|gb|ACM63884.1| 60 kDa inner-membrane protein [Campylobacter lari RM2100] Length = 526 Score = 247 bits (629), Expect = 5e-63, Method: Composition-based stats. Identities = 133/568 (23%), Positives = 244/568 (42%), Gaps = 59/568 (10%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + +A+ LS + + F++ + N + Q P N+ + + Sbjct: 7 QQKRILIAVVLSFLFFVVYDYFFIPKAPQTEQNITQIEQNNSAPQSTINANTQAPKTELS 66 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 +K+ I+ G + L N + L+ S + Sbjct: 67 -VNQKEEIAVVKSEHFEAHIDSLG-RIAKFYLSDEKYK-DENGKSINLVDTSLSPLP--- 120 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEHYLFK 181 L+ + I NT + I L+ NN++ + I+ ++ + Sbjct: 121 -LEIRFSDTKINQEAFNTPYTTSQKTINVSDENTTLILTQNLNNLVVTKKITFHKYGNYD 179 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 + N S D F G ++P A +++ V I + + Sbjct: 180 LE---VNLSKDAAYFITPG----YRPNIAVDSYTVHGVLI----LDKDDKITMLEDGDVE 228 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 + + + SD+Y+ + F + K + + S Sbjct: 229 NDESFSNVTLMAASDRYY------------SAFFYNFEKPLSAVVTKDNHENSIVFASAS 276 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 T + G+KE + + + PR + ++++GWF FIAKPM+ + + + +GN+G Sbjct: 277 NTFKASGYIGSKEHDILRNID-----PRLDNVVEYGWFTFIAKPMYEFLDFLHGYLGNWG 331 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 AI++ T+ V+++ FPL K +S +K++ PK+ E+RE++K PQ + M++LYK Sbjct: 332 WAIVIMTLIVRIILFPLTYKSMISMNKLKDLAPKMKEIRERYKG-DPQKMNLHMMELYKK 390 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 H NP++GC PIL+QIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 391 HGANPMSGCLPILIQIPIFFAIYRVLLNAIELKAAPWAFWITDLSVMDPWF--------- 441 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLII 540 I PI M L+MFIQ ++P D Q I+ ++P++F F +FPAGL + Sbjct: 442 ----------ILPIFMGLTMFIQQLITPMAIQDPMQEKIMKFLPLIFTFFFLTFPAGLTL 491 Query: 541 YWSWSNVISIVQQAVIMK--MHGAEIGL 566 YW +N+ S++QQ ++ K + + + Sbjct: 492 YWCVNNICSLIQQVIVNKLFKNHKKEEI 519 >gi|83816022|ref|YP_444208.1| inner membrane protein oxaA [Salinibacter ruber DSM 13855] gi|83757416|gb|ABC45529.1| inner membrane protein oxaA [Salinibacter ruber DSM 13855] Length = 665 Score = 247 bits (629), Expect = 5e-63, Method: Composition-based stats. Identities = 110/624 (17%), Positives = 220/624 (35%), Gaps = 67/624 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY---------------------------------- 27 E N +A L +I++AW ++ Sbjct: 23 EDQRNVIIATILVAVIMFAWIFWFSPSPQQQQSQQAAGPADTTEQTDPSAPAADTGADDA 82 Query: 28 PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGA 87 P + QP A A R+ +++ ++ KG Sbjct: 83 PSDAAPPSTADAGADASQPEADQPEAPAPDSVTAAALEGTQRRIVVESDLYTVVLSTKGG 142 Query: 88 QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147 + L+ Y + V ++ + + + + + Sbjct: 143 TIERFTLKEYKQFNQED--PVQIVDTTAGGTLSLSFTTPTRRRVDTRSLYFSADTEADTV 200 Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 +I + + + + L + + Y + P Sbjct: 201 RIEDESKTLTFEAQLGDGALRQSYTFHPDDYDLGLAIEQERPRSFLTSDGYELTWHGGMP 260 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 + + ++ + SW+ + +KY+ + +P + Sbjct: 261 YSEGGEEDELRYTGLFARNGEQIQSLTLSDADQNQKRIEGDVSWMAVKNKYFTAAVMPDR 320 Query: 268 E-TSFHSQFKYLSDGHARYQAKF---SANEITILPGKSITT-TNFLFAGAKEFPTIHHYE 322 T+ + +G A +A F + LP ++ L+AG ++ ++ Y Sbjct: 321 PATALGASLTGRKEGRATSEAAFKDLTGRLQMPLPRETTHVDKFHLYAGPIDYYSLADYG 380 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMS-------------YFYNLVGNFGIAIMLTTV 369 ++L + W WF ++ KP+ + + + +G+ ++L V Sbjct: 381 RNLYGM---VNYGWDWFEWMTKPLAEYLYIPMLTYLGGGLPSWLFGGGLPYGVIVILMAV 437 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +K + +PL K Y S A M+ +QPK+ E+++K+ P+ Q+ M+QLY+ +NPL G Sbjct: 438 LIKTVVYPLTKSSYRSMAQMRELQPKMQEIKDKY-DDEPEKQQEEMMQLYRETGVNPLGG 496 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P+ LQ P+ ++Y+ I S+++R + W DL+A D I L +PFY Sbjct: 497 CLPMFLQYPILISLYQFIPKSIQLRQES-FLWAADLSAPDK--ILQLPFEIPFYGDYVAG 553 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKG--QAMILNW-MPVVFVFALSSFPAGLIIYWSWSN 546 + ++M L+M + M++ QA I + MP V F + F +GL +Y+ + N Sbjct: 554 ---FTLLMGLAMIVTMRVQSTGGGAAGGQAKIFMYAMPGVIFFIFNRFASGLSLYYLFYN 610 Query: 547 VISIVQQAVIMKMHGAEIGLIDRL 570 +++ QQ I E L Sbjct: 611 IVTAAQQKWINMQLEKEKDDDGNL 634 >gi|315585837|gb|ADU40218.1| inner membrane protein OxaA [Helicobacter pylori 35A] Length = 546 Score = 247 bits (629), Expect = 5e-63, Method: Composition-based stats. Identities = 132/588 (22%), Positives = 231/588 (39%), Gaps = 58/588 (9%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N +AIALS + + + F+ + Q + NS Sbjct: 1 MDKNNNTNIRLILAIALSFLFIAIYSYFF---QKPNQTTTPTTKQETTNNHTATNSNTPN 57 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LL 111 + + + I+ G + + L+ ++ L Sbjct: 58 AFNTTQTIPQENLLSTISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLF 115 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 +P EL ++ L L + TP + K ++ + Sbjct: 116 NPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQD 175 Query: 172 -----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 I + + + P I A G + D Sbjct: 176 LGALTIIKTLTFYDDLHYDLQIAFKSPNNIIPSYVITNGYKPVADLDSYTFSGVLLENND 235 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 K + + + D + + +L D+Y+ ++ F + Sbjct: 236 KKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS--------- 283 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + G K++ ++ P +I++G F AK + Sbjct: 284 -EIGTKNPLGFISLKNGANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGV 337 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL+EK+K Sbjct: 338 FVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKG- 396 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ Sbjct: 397 EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLS 456 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 DP I P++M SM+ ++P D QA I ++P+ Sbjct: 457 IMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKIFKFLPL 497 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +F L +FPAGL++YW+ +N++S++QQ +I K+ + + + Sbjct: 498 LFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRAHAQNKKE 545 >gi|289826408|ref|ZP_06545520.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 485 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 118/513 (23%), Positives = 214/513 (41%), Gaps = 52/513 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 DP I PI+M ++ Sbjct: 461 QDPYY-------------------ILPILMGVT 474 >gi|188528220|ref|YP_001910907.1| putative inner membrane protein translocase component YidC [Helicobacter pylori Shi470] gi|188144460|gb|ACD48877.1| putative inner membrane protein translocase component YidC [Helicobacter pylori Shi470] Length = 546 Score = 246 bits (626), Expect = 9e-63, Method: Composition-based stats. Identities = 132/588 (22%), Positives = 234/588 (39%), Gaps = 58/588 (9%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N +AIALS + + + F+ P ++ + A Sbjct: 1 MDKNNNANIRLILAIALSFLFIAIYSYFFQKPNKTTTPTTKQETTNNHTTTNPNTPNAFN 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LL 111 Q +S + I+ G + + L+ ++ L Sbjct: 61 ATQAIPQENLLS---TISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVSHLF 115 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 +P EL ++ L L + TP + K ++ + Sbjct: 116 NPKANPQTPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQD 175 Query: 172 -----ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 I + + + + P I A G + D Sbjct: 176 LGALTIIKTLTFYDDLHYDLQIAFKSPNKIIPSYVITNGYKPVADLDSYTFSGVLLENND 235 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 K + + + D + + +L D+Y+ ++ F + Sbjct: 236 KKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS--------- 283 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + G K++ ++ P +I++G F AK + Sbjct: 284 -EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKGV 337 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F+L+ Y Y VGN+G AI+L T+ V+L+ +PL+ K VS +K I PK+ EL+EK+K Sbjct: 338 FVLLDYLYQFVGNWGWAIILLTIIVRLILYPLSYKGMVSMQKLKEIAPKMKELQEKYKD- 396 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI DL+ Sbjct: 397 EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWIHDLS 456 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPV 525 DP I P++M SM+ ++P D QA + ++P+ Sbjct: 457 IMDPYF-------------------ILPLLMGASMYWHQSVTPSSVTDPMQAKLFKFLPL 497 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +F L +FPAGL++YW+ +N++S++QQ +I K+ + + + + Sbjct: 498 LFTIFLITFPAGLVLYWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 545 >gi|226326926|ref|ZP_03802444.1| hypothetical protein PROPEN_00786 [Proteus penneri ATCC 35198] gi|225204763|gb|EEG87117.1| hypothetical protein PROPEN_00786 [Proteus penneri ATCC 35198] Length = 322 Score = 246 bits (626), Expect = 1e-62, Method: Composition-based stats. Identities = 103/334 (30%), Positives = 189/334 (56%), Gaps = 27/334 (8%) Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 ++ + + DIE ++S +N W+ + +Y+A+ ++PSK++ + + + + Sbjct: 2 KPTIKKYSFGDIEDKNLSLT-TNNGWVAMLQQYFATAWVPSKDSQNNQFYTITLENKSIA 60 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + +TI P + ++ L+ G + + P ++ +D+GW +FI++P Sbjct: 61 LIGYKSAPVTIAPNSTADISSTLWVGPEIQSEMSAIA-----PHLDLSVDYGWLWFISQP 115 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F L+ + ++ +GN+G +I++ T V+ + +PL K QY S A M+ +QPK+ LRE+ Sbjct: 116 LFKLLKFLHSFIGNWGFSIIMITFIVRGIMYPLTKAQYTSMAKMRLLQPKLAALRERIGD 175 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q + + M+ LYK +NPL GC P+++Q+P+F A+Y ++ S+E+RHAPF WI+DL Sbjct: 176 DK-QRMSQEMMALYKQEKVNPLGGCLPLIIQMPIFLALYYMLMGSVELRHAPFMLWIQDL 234 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 +A DP I P++M ++MFI K+SP D Q I+ +MP Sbjct: 235 SAQDPYY-------------------ILPLLMGVTMFIIQKLSPTAVTDPMQQKIMTFMP 275 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 VVF FP+GL++Y+ SN+++I+QQ +I + Sbjct: 276 VVFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 309 >gi|294505868|ref|YP_003569926.1| Inner membrane protein oxaA [Salinibacter ruber M8] gi|294342196|emb|CBH22974.1| Inner membrane protein oxaA [Salinibacter ruber M8] Length = 654 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 112/624 (17%), Positives = 223/624 (35%), Gaps = 67/624 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVY---------------------------------- 27 E N +A L +I++AW ++ Sbjct: 12 EDQRNVIIATILVAVIMFAWIFWFSPSPQQQQSQQAAGPADTTEQTDPSAPAADTGADDA 71 Query: 28 PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGA 87 P + QP+ A A R+ +++ ++ KG Sbjct: 72 PSDAAPPSTADAGADASQPDADQPEAPAPDSVTAAALQGTQRRIVVESDLYTVVLSTKGG 131 Query: 88 QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147 + L+ Y + V ++ + + + + + Sbjct: 132 TIERFTLKEYKQFNQED--PVQIVDTTAGGTLSLSFTTPSRRRVDTRSLYFSADTKADTV 189 Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 +I + + + + L + + Y + P Sbjct: 190 RIEDESKTLTFEAQLGDGALRQSYTFHPDDYDLGLAIEQERPRSFLTSDGYELTWHGGMP 249 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 + + ++ + SW+ + +KY+ + +P + Sbjct: 250 YSEGGEEDELRYTGLFARNGEQIQSLTLSDADQNQKRIEGDVSWMAVKNKYFTAAVMPDR 309 Query: 268 E-TSFHSQFKYLSDGHARYQAKF---SANEITILPGKSITT-TNFLFAGAKEFPTIHHYE 322 T+ + +G A +A F + LP ++ L+AG ++ ++ Y Sbjct: 310 PATALGASLTGRKEGRATSEAAFKDLTGRLQMPLPRETTHVDKFHLYAGPIDYYSLADYG 369 Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMS-------------YFYNLVGNFGIAIMLTTV 369 ++L + W WF ++ KP+ + + + +G+ ++L V Sbjct: 370 RNLYGM---VNYGWDWFEWMTKPLAEYLYIPMLTYLGTGLPSWLFGGGLPYGVIVILMAV 426 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +K + +PL K Y S A M+ +QPK+ E+++K+ P+ Q+ M+QLY+ +NPL G Sbjct: 427 LIKTVVYPLTKSSYRSMAQMRELQPKMQEIKDKY-DDEPEKQQEEMMQLYRETGVNPLGG 485 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P+ LQ P+ ++Y+ I S+++R + W DL+A D I L +PFY Sbjct: 486 CLPMFLQYPILISLYQFIPKSIQLRQES-FLWAADLSAPDK--ILQLPFEIPFYGDYVAG 542 Query: 490 VGIWPIIMSLSMFIQMKMSPP--PADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSN 546 + ++M L+M + M++ A GQA I + MP V F + F +GL +Y+ + N Sbjct: 543 ---FTLLMGLAMIVTMRVQSTGGGAAGGQAKIFMYAMPGVIFFIFNRFASGLSLYYLFYN 599 Query: 547 VISIVQQAVIMKMHGAEIGLIDRL 570 +++ QQ I E L Sbjct: 600 IVTAAQQKWINMQLEKEKDDDGNL 623 >gi|187251668|ref|YP_001876150.1| preprotein translocase subunit [Elusimicrobium minutum Pei191] gi|186971828|gb|ACC98813.1| Pre-protein translocase subunit [Elusimicrobium minutum Pei191] Length = 531 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 119/580 (20%), Positives = 220/580 (37%), Gaps = 73/580 (12%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV--DNSYAAVLID 59 N + +A + I + +Q FY P+ +E +++ +Q NS Sbjct: 1 MENKKFLMAFLVFFIALLMYQQFYALPKAQEAKAKQEASLVAEQAVTATKSNSSITKTAL 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + KGA D + DV+ L+P + Sbjct: 61 TPSDKQVEEKFYDFSTKVADIKFTSKGAGIKDYIFKDCVGDVN--------LTPYTEEGF 112 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 Y + I +T + ++ + Sbjct: 113 YTTFPRLTFKEAGRTENSITFT-------------------VEEGYIRINKTYTFNDDGI 153 Query: 180 FKIVDTVTNNSID-----QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 + ++ N S Q F+ I + + + N+ ++ +I K Sbjct: 154 NNLSLSIENRSTKEQTLDQFYFNFGPGIGTVESEKSDNSREMKAVYITQEEGKKFPTFHN 213 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSK-------------ETSFHSQFKYLSDG 281 EK S + W G++++Y+ +V IP ++ Sbjct: 214 RSKEKIEDSVKDGNWIWAGLNNRYFLAVLIPQNWKSGLLETEKVIVDSHPRFFGLLGKAK 273 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 K + +++ P + + G K++ T + I++G+F Sbjct: 274 VEGPMLKITVPAMSLPPKSKTVLQSDFYFGPKDYKTFQTMPYS-----LDKSIEFGFFGA 328 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + K + ++ Y GN+G+AI++ V ++ L Q+ S+ M+ IQP++ ++E Sbjct: 329 LGKMVRWVLETLYRFTGNYGVAIIILAVLFQITMLRLTIMQHKSSMVMQKIQPEMKSIQE 388 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 ++K Q+AM+ LYK H NP GC P+L+Q+P+F A++ S E+ A F W Sbjct: 389 RYKN-DQTAQQQAMLALYKKHKFNPFMGCLPLLIQLPIFIALFNAFRTSWELHGAGFVWW 447 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAMIL 520 I DL+A DP + PI+M MFIQ +++ P +D Q +L Sbjct: 448 ITDLSAKDPFY-------------------VLPIVMGGVMFIQQRITAPVGSDPTQTAML 488 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 WMPV+F F +FPAGL++YW +++IS+ Q + + Sbjct: 489 KWMPVIFTFVFINFPAGLVLYWLTNSIISLGIQLYMKRKM 528 >gi|154148946|ref|YP_001406234.1| putative inner membrane protein translocase component YidC [Campylobacter hominis ATCC BAA-381] gi|153804955|gb|ABS51962.1| inner membrane protein, 60 kDa [Campylobacter hominis ATCC BAA-381] Length = 532 Score = 244 bits (621), Expect = 4e-62, Method: Composition-based stats. Identities = 135/570 (23%), Positives = 241/570 (42%), Gaps = 64/570 (11%) Query: 1 MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER-----KNIQTVKQPNQVDNS 52 ME+ F+A+ L+ A+ FY+ NN K + + + Sbjct: 1 MEQLSVQKRIFIAVLLTFAFFIAYDYFYLSKFQVPENNATGALIDKQSRNTEALVNEAPN 60 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 + + ++K SI+ G + + L + + L+ Sbjct: 61 AKNDKVAPAKAVNKRNVITQIKGKIANFSIDDLG-RINSYVLNESKYKND-DKMQIDLVD 118 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERT 171 S + L+ + ++ T + + + LV ++L + Sbjct: 119 LSKSPLP----LEMRFSNPDLNELAFKTPYVASASNLDITKNEQNLVLTQNLGDVLVTKN 174 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 I+ + +KI + N+ +P + + V I K Sbjct: 175 ITFYPNGSYKISVQLNKNAE-------FFISPGSRPSIVVDGYTVHGVLIR----KDDES 223 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 K + + ++ + SD+Y+ + F ++ + S Sbjct: 224 LKMFEDGDVDSNENIQNANIAAASDRYY------------TTFFYDFTNKLNLVISSDSD 271 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 I T F G K + + +K R +I++GWF FI+KPMF + Sbjct: 272 KVSQIFAKADKTFEAGGFIGPKHYDLLTGIDK-----RLSDVIEYGWFTFISKPMFGFLK 326 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + +N GN+G AI++ T+ V+ + +PL+ K +S MK++ PK+ EL+ ++K P+ L Sbjct: 327 WLHNYTGNWGWAIVIMTLIVRAILYPLSYKGMLSMNKMKDLAPKMKELQARYKG-DPKKL 385 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q +M++LYK +N+NP+ GC PILLQ+P+FFAIY+V+ ++E++ A + WI DL+ DP Sbjct: 386 QTSMMELYKKNNVNPMGGCLPILLQVPIFFAIYRVLLNAIELKGAEWAFWIHDLSVKDPY 445 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFA 530 I PI M + MF+Q K++P D Q I+ ++P++F F Sbjct: 446 F-------------------ILPITMGILMFLQQKITPTNFTDPMQEKIMKFLPLIFTFF 486 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +FPAGL +YW+ +N+ SI+QQ I KM Sbjct: 487 FMAFPAGLTLYWTVNNLASIIQQYTINKMF 516 >gi|157415220|ref|YP_001482476.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. jejuni 81116] gi|157386184|gb|ABV52499.1| 60 kDa inner-membrane protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747862|gb|ADN91132.1| Inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni M1] gi|315932545|gb|EFV11478.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp. jejuni 327] Length = 530 Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats. Identities = 136/564 (24%), Positives = 256/564 (45%), Gaps = 55/564 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + +A+ +S + + F++ + ++ + + + Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPS 68 Query: 63 QALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AL V ++++ I+ G + L+ + + L+S N+ Y Sbjct: 69 AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKD-KKYQNEKGEFINLVSKENS--PY 124 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E+ + + N E V N + + + + + +N + + E+ I+ + Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLTQNLSGLKIEKDITFYPKGNY 184 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 +I ++ N+ ++P A +++ V + + +++ K D+EK Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNKETIETYKDGDVEKD 236 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 +N S D+Y+A+ F +K + + Sbjct: 237 ESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAISKDANKNPIVFAYS 281 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + G+KE + + PR E ++++GWF FIAKPMF +++ + +GN+ Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNW 336 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K PQ + M++LYK Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539 I PI+M ++MF+Q ++P D QA I+ ++PV+F F +FPAGL Sbjct: 448 -----------ILPILMGVTMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLT 496 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW +N+ S+VQQ VI K+ E Sbjct: 497 LYWFVNNLCSLVQQWVINKIFAKE 520 >gi|86150951|ref|ZP_01069167.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 260.94] gi|86152990|ref|ZP_01071195.1| inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613009|ref|YP_001000640.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. jejuni 81-176] gi|167005567|ref|ZP_02271325.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. jejuni 81-176] gi|85842121|gb|EAQ59367.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 260.94] gi|85843875|gb|EAQ61085.1| inner membrane protein oxaA [Campylobacter jejuni subsp. jejuni HB93-13] gi|87248917|gb|EAQ71880.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 81-176] Length = 528 Score = 243 bits (620), Expect = 6e-62, Method: Composition-based stats. Identities = 136/564 (24%), Positives = 255/564 (45%), Gaps = 55/564 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + +A+ +S + + F++ + ++ + + + Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPS 68 Query: 63 QALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AL V ++++ I+ G + L+ + + L+S N+ Y Sbjct: 69 AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKD-KKYQNEKGEFINLVSKENS--PY 124 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E+ + + N E V N + + + + + +N + + E+ I+ + Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLTQNLSGLKIEKDITFYPKGNY 184 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 +I ++ N+ ++P A +++ V + + +++ K D+EK Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNKETIETYKDGDVEKD 236 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 +N S D+Y+A+ F +K + + Sbjct: 237 ESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAISKDANKNPIVFAYS 281 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + G+KE + + PR E ++++GWF FIAKPMF +++ + +GN+ Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNW 336 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K PQ + M++LYK Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539 I PI+M +MF+Q ++P D QA I+ ++PV+F F +FPAGL Sbjct: 448 -----------ILPILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLT 496 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW +N+ S+VQQ VI K+ E Sbjct: 497 LYWFVNNLCSLVQQWVINKIFAKE 520 >gi|57237786|ref|YP_179034.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni RM1221] gi|57166590|gb|AAW35369.1| inner membrane protein, 60 kDa [Campylobacter jejuni RM1221] gi|315058399|gb|ADT72728.1| OxaI/YidC membrane insertion protein [Campylobacter jejuni subsp. jejuni S3] Length = 530 Score = 243 bits (619), Expect = 7e-62, Method: Composition-based stats. Identities = 136/564 (24%), Positives = 255/564 (45%), Gaps = 55/564 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + +A+ +S + + F++ + ++ + + + Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPS 68 Query: 63 QALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AL V ++++ I+ G + L+ + + L+S N+ Y Sbjct: 69 AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKD-KKYQNEKGEFINLVSKENS--PY 124 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E+ + + N E V N + + + + + +N + + E+ I+ + Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLTQNLSGLKIEKDITFYPKGNY 184 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 +I ++ N+ ++P A +++ V + + +++ K D+EK Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNKETIETYKDGDVEKD 236 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 +N S D+Y+A+ F +K + + Sbjct: 237 ESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAISKDANQNPIVFAYS 281 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + G+KE + + PR E ++++GWF FIAKPMF +++ + +GN+ Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNW 336 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K PQ + M++LYK Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539 I PI+M +MF+Q ++P D QA I+ ++PV+F F +FPAGL Sbjct: 448 -----------ILPILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLT 496 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW +N+ S+VQQ VI K+ E Sbjct: 497 LYWFVNNLCSLVQQWVINKIFAKE 520 >gi|257461375|ref|ZP_05626471.1| inner membrane protein, 60 kDa [Campylobacter gracilis RM3268] gi|257441098|gb|EEV16245.1| inner membrane protein, 60 kDa [Campylobacter gracilis RM3268] Length = 547 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 127/567 (22%), Positives = 241/567 (42%), Gaps = 52/567 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYP------RIEEMNNERKNIQTVKQPNQVDNSYAAV 56 ++ +AIA ++I A+ +FY+ + P +A Sbjct: 7 QSKRLAIAIATALIFFVAYDHFYLSKIRAAMEANATAAQIAQKNTAKSAPQTSAAGVSAQ 66 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + +P V + +I+ G + L + N + L+ P + Sbjct: 67 GANLNTANSISAPLVRVVGKEANFTIDGLG-RISSYALNDAKFR-NENGDAINLIDPKSH 124 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLD 175 L+ + +T ++ S ++ + + + + ++ Sbjct: 125 SKP----LEMRFEDAALNAMAFDTPYSASSNELDVRNGEASVTLSQSLGAVSINKILTFY 180 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ--- 232 + +K+ + N+ +P +++ V + G+ + ++ Sbjct: 181 PNGSYKLDLKLGGNAR-------YFISPGSRPNVEVDSYTVHGVIVGKPGEAGISDKIAS 233 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 ++ + S S + + +++ + S + + + F S A + Sbjct: 234 FFTGSQAISESVEIFKDGDVDKNERISGANIAASSDRYYTTLFYGESLNATVTDADKISQ 293 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 G + + GAK+ T+ P +I++GWF FIA+PMF +++ Sbjct: 294 VFI---GSDGDLSLTGYIGAKDHATLSSIN-----PALTHIIEYGWFTFIARPMFKFLNW 345 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + +GN+G +I++ T+ ++L+ FPL+ K +S +K++ PK+ EL+EK+K Q LQ Sbjct: 346 LHGYIGNWGWSIVVLTLIIRLILFPLSYKGMLSMNKLKDLAPKMKELQEKYKDDK-QKLQ 404 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 M+ LYK + NP+ GC PILLQIPVFFAIY+V+ ++E++ A + WI DL+ DP Sbjct: 405 MHMMDLYKKNGANPMGGCLPILLQIPVFFAIYRVLLNAIELKGAEWALWIHDLSLKDPYY 464 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 I PI M + MF+Q K++P D Q ++ ++P++F Sbjct: 465 -------------------ILPITMGILMFLQQKITPTTFTDPMQEKMMKFLPLIFTVFF 505 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 FPAGL +YW+ +N SI+QQ VI K Sbjct: 506 VMFPAGLTLYWTVNNFCSIIQQYVINK 532 >gi|315637646|ref|ZP_07892852.1| inner membrane protein [Arcobacter butzleri JV22] gi|315478100|gb|EFU68827.1| inner membrane protein [Arcobacter butzleri JV22] Length = 533 Score = 242 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 131/572 (22%), Positives = 226/572 (39%), Gaps = 66/572 (11%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 + + + A++ + P+ E + K Q KQ + + S + V+ ++ Sbjct: 11 QKRMIIMTIVVFVFFIAYEFLVLKPQQEAKMAQAKIEQEQKQNSAPEVSTSQVVAENSVN 70 Query: 64 A----------LSMSPRVE-LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 +S S V +K + I+ G + + L N + L Sbjct: 71 TPNVDTISSKNVSNSQIVSVIKTAKNVIEIDNLG-RVAQVTLTEEKYK-DENGAQIKLF- 127 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 N ++ N + I + N + + Sbjct: 128 EVNQLKPLEVRFADININEEAFKVNVVPSSSNIDATQNKQELVLTQTLTN---TVLTKKF 184 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 ++ + + + TN+ P +P + + V + + Sbjct: 185 TIYPDGHYDLTVSSTND-------KPFFVSNGFRPNVLVDMYAVH----GFITKLNDNSL 233 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + S + + ++ D+Y+A+V S+N Sbjct: 234 TTIEDGSSKKNETFVGSKFVSNFDRYYATVI------------YNFEKSLQVTVMPDSSN 281 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 S + + G K + P +ID+GWF FIAKPMF+L+ + Sbjct: 282 NPQSFIHSSGNISFSGYMGPKNHRVLESLN-----PELIDVIDYGWFTFIAKPMFVLLQF 336 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 +GN+G I+ T+ VKL+ +PL+ K VS +K++ PK+ E++ K+K Q Sbjct: 337 LQGYIGNWGWTIVALTILVKLVLYPLSYKGMVSMQKLKDLAPKMKEIQLKYKDDK-QKQS 395 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 M++LYK H NP+ GC P+LLQIP+FFAIY+V+ ++E++ A + WI DLAA DP Sbjct: 396 MHMMELYKKHGANPMGGCLPLLLQIPIFFAIYRVLINAIELKGAEWIFWIHDLAAMDPFF 455 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 + PI+M +M+IQ K++P D+ Q I +P+VF F Sbjct: 456 -------------------VLPILMGATMYIQQKITPTTVQDELQKKIFQLLPIVFTFFF 496 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL +YW +N+ +I QQ VI K + Sbjct: 497 LWFPAGLTLYWFVNNLFTIGQQYVINKTFERK 528 >gi|109946792|ref|YP_664020.1| putative inner membrane protein translocase component YidC [Helicobacter acinonychis str. Sheeba] gi|109714013|emb|CAJ99021.1| inner-membrane protein [Helicobacter acinonychis str. Sheeba] Length = 546 Score = 242 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 137/591 (23%), Positives = 231/591 (39%), Gaps = 64/591 (10%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N +AIALS + + + F+ P K N+ Sbjct: 1 MDKNNNTNLRLILAIALSFLFITLYSYFFQKPDKTTPKETAKQEAANNNTALNPNAPTTQ 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLS 112 S + I+ G + + L+ + L S Sbjct: 61 NSSAAQAIPQESLLSTISFEHAKIEIDSLG-RIKQVYLKNKKYLTPKEKGFLEHVSHLFS 119 Query: 113 PSNTKNAYFAELDYVSTA---------NNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 EL + + + S L P + L Sbjct: 120 SKENTQPLLKELPLLGDNLKPLEVRFLDPTLNNKAFNTSYSASKTTLGPNEQLILTQDLG 179 Query: 164 NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 + + + D+ HY +I NN P I A G + Sbjct: 180 DLTIIKTLTFYDDLHYDLQIAFKSPNN------IIPNYVITNGYRPVADLDSYTFSGVLL 233 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 DK + + + D + + +L D+Y+ ++ F + + Sbjct: 234 ENNDKKIEKIEDKD---AKEIKRFSNIRFLSSVDRYFTTLLFTDNPQGFEALIDSETG-- 288 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 T + G K++ ++ P +I++G F Sbjct: 289 --------TKNPLGFISLKNEATLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFF 335 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS +K + PK+ EL+EK Sbjct: 336 AKGVFVLLDYLYQFVGNWGWAIILLTIVVRIILYPLSYKGMVSMQKLKELAPKMKELQEK 395 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI Sbjct: 396 YKG-EPQKLQANMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWI 454 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILN 521 DL+ DP I P+ M SM+ ++P D QA I Sbjct: 455 HDLSIMDPYF-------------------ILPLFMGASMYWHQSVTPNTMTDPMQAKIFK 495 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 ++P++F L +FPAGL++YW +NV+S++QQ +I K+ + + ++ + Sbjct: 496 FLPLLFTLFLITFPAGLVLYWITNNVLSVLQQLIINKVLENKKHMHEQTKK 546 >gi|283956364|ref|ZP_06373844.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 1336] gi|283792084|gb|EFC30873.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 1336] Length = 528 Score = 242 bits (616), Expect = 2e-61, Method: Composition-based stats. Identities = 135/564 (23%), Positives = 255/564 (45%), Gaps = 55/564 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + +A+ +S + + F++ + ++ + + + Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPS 68 Query: 63 QALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AL V ++++ I+ G + L+ + + L+S N+ Y Sbjct: 69 AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKD-KKYQNEKGEFINLVSKENS--PY 124 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E+ + + N E + N + + + + + +N + + E+ I+ + Sbjct: 125 PLEMRFSDPSINSEAFKFPYIANSSNLFVDENGSQVLKLTQNLSGLKIEKDITFYPKGNY 184 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 +I ++ N+ ++P A +++ V + + +++ K D+EK Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNKETIETYKDGDVEKD 236 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 +N S D+Y+A+ F +K + + Sbjct: 237 ESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAISKDANKNPIVFAYS 281 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + G+KE + + PR E ++++GWF FIAKPMF +++ + +GN+ Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNW 336 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K PQ + M++LYK Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539 I PI+M +MF+Q ++P D QA I+ ++PV+F F +FPAGL Sbjct: 448 -----------ILPILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLT 496 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW +N+ S+VQQ VI K+ E Sbjct: 497 LYWFANNLCSLVQQWVINKIFAKE 520 >gi|148926121|ref|ZP_01809807.1| putative membrane protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845600|gb|EDK22692.1| putative membrane protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 530 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 137/564 (24%), Positives = 255/564 (45%), Gaps = 55/564 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + +A+ +S + + F++ + ++ + + + Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPS 68 Query: 63 QALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AL V ++++ I+ G + L+ + + L+S N+ Y Sbjct: 69 AALVSQDSVISKVQSKHFEVQIDSFG-RISAFYLKD-KKYQNEKGEFINLVSKENS--PY 124 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E+ + + N E V N + + + + + +N + + E+ I+ + Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLTQNLSGLKIEKDITFYPKGNY 184 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 +I ++ N+ ++P A +++ V + + +++ K D+EK Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNKETIETYKDGDVEKD 236 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 +N S D+Y+A+ F +K + + Sbjct: 237 ESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAISKDANQNPIVFAYS 281 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + G+KE + + PR E ++++GWF FIAKPMF +++ Y +GN+ Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLYQYIGNW 336 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K PQ + M++LYK Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539 I PI+M +MF+Q ++P D QA I+ ++PV+F F +FPAGL Sbjct: 448 -----------ILPILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLT 496 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW +N+ S+VQQ VI K+ E Sbjct: 497 LYWFVNNLCSLVQQWVINKIFAKE 520 >gi|296273897|ref|YP_003656528.1| membrane protein insertase [Arcobacter nitrofigilis DSM 7299] gi|296098071|gb|ADG94021.1| membrane protein insertase, YidC/Oxa1 family [Arcobacter nitrofigilis DSM 7299] Length = 548 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 129/592 (21%), Positives = 243/592 (41%), Gaps = 73/592 (12%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEM------------NNERKNIQTVKQPNQVD- 50 + + + A++ + P+ E NN + Q P Sbjct: 11 QKRMLIMTLIVFVFFVAYEYLVLKPQKEAQAAKIAQEKMVKANNAPQVAQDSTNPASAPV 70 Query: 51 ---NSYAAVLIDDRAQALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 ++ + V ++ ++ S V + I I+ G + + L ++ ++ Sbjct: 71 SNMSTPSNVADAISSKTIAPSDIVSTITTGKNIIQIDKLG-RIAQVTLLQ-RQYINEDNS 128 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NN 165 + L P+ L+ NI N + + + L+ Sbjct: 129 HIKLFEPNQ-----LRPLEVRFADKNINNEAFNVEVTVSAPVVDATKQTQTLIITQTLKE 183 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 + +T+++ + + TNN ++P + + + Sbjct: 184 TVLTKTLTIYADGHYDLDVKATNN-------KQFFITPGYRPNVLADMYADHGAIV---- 232 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + KS + +++ +L D+Y+ +V + + + Sbjct: 233 KLADNTLDVTVDGKSKETQTYKAVKFLAFFDRYYTTV-----------AYNFKKNFQVSI 281 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + + ++ + G KE T+ P+ +I++GWF FIA P Sbjct: 282 MPDKNNDPQGFIHSENSFIDFSGYMGPKEHKTLKALN-----PQLTGVIEYGWFTFIANP 336 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 MF+ + + + +GN+G I+ T+ +KL+ FPL+ K +S +K++ PKI EL+EK+K Sbjct: 337 MFLFLQFLQSYIGNWGWTIVFATIIIKLILFPLSYKGMMSMQKLKDLAPKIKELQEKYKG 396 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q M++LYK H NP+ GC P+++QIPVFFA+Y+VI ++E++ +P+ WI DL Sbjct: 397 DK-QKQSAHMMELYKKHGANPMGGCLPLIMQIPVFFALYRVILNAIELKGSPWILWIHDL 455 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMP 524 A DP + PI+M +SMF+Q +++P D+ Q I ++P Sbjct: 456 ALMDPYY-------------------VLPILMGISMFLQQRITPNTMQDETQKKIFQFLP 496 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 VVF F FPAGL +YW +N+ +I QQ I KM + + + K Sbjct: 497 VVFTFFFLWFPAGLTLYWFINNLFTISQQLFINKMFEKKKLIEIEEKKASKK 548 >gi|157737856|ref|YP_001490540.1| putative inner membrane protein translocase component YidC [Arcobacter butzleri RM4018] gi|157699710|gb|ABV67870.1| inner membrane protein, 60 kDa [Arcobacter butzleri RM4018] Length = 533 Score = 241 bits (614), Expect = 3e-61, Method: Composition-based stats. Identities = 129/572 (22%), Positives = 228/572 (39%), Gaps = 66/572 (11%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 + + + A++ + P+ E + K Q KQ + + S + V+ ++ Sbjct: 11 QKRMIIMTIVVFVFFIAYEFLVLKPQQEAKMAQAKIEQEQKQNSAPEVSTSQVVAENSVN 70 Query: 64 A----------LSMSPRVE-LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 +S S V +K I I+ G + + L N + L Sbjct: 71 TPNVDAISSKNVSNSQIVSVIKTAKNIIEIDNLG-RVAQVTLTEEKYK-DENGAQIKLF- 127 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 +N ++ N + I + N + + Sbjct: 128 EANQLKPLEVRFADININEEAFKVNVVPSSSNIDATQNKQELVLTQTLTN---TVLTKKF 184 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 ++ + + + TN+ P +P + + V + + Sbjct: 185 TIYPDGHYDLTVSSTND-------KPFFVSNGFRPNVLVDMYAVH----GFITKLNDNSL 233 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + S + + ++ D+Y+A+V S+N Sbjct: 234 TTIEDGSSKKNETFVGSKFVSNFDRYYATVI------------YNFEKSLQVTVMPDSSN 281 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 S + + G K + P +ID+GWF FIAKPMF+L+ + Sbjct: 282 NPQSFIHSSGDISFSGYMGPKNHRVLESLN-----PELIDVIDYGWFTFIAKPMFVLLQF 336 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 + +GN+G I+ T+ VK++ +PL+ K VS +K++ PK+ E++ K+K Q Sbjct: 337 LQSYIGNWGWTIVALTILVKVVLYPLSYKGMVSMQKLKDLAPKMKEIQLKYKDDK-QKQS 395 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 M++LYK H NP+ GC P++LQIP+FFAIY+V+ ++E++ A + WI DLAA DP Sbjct: 396 MHMMELYKKHGANPMGGCLPLILQIPIFFAIYRVLINAIELKGAEWIFWIHDLAAMDPFF 455 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFAL 531 + PI+M +M+IQ +++P D+ Q I +P+VF F Sbjct: 456 -------------------VLPILMGATMYIQQRITPTTVQDELQKKIFQLLPIVFTFFF 496 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPAGL +YW +N+ +I QQ VI K + Sbjct: 497 LWFPAGLTLYWFVNNLFTIGQQYVINKTFERK 528 >gi|298377600|ref|ZP_06987552.1| inner membrane protein OxaA [Bacteroides sp. 3_1_19] gi|298265619|gb|EFI07280.1| inner membrane protein OxaA [Bacteroides sp. 3_1_19] Length = 633 Score = 241 bits (614), Expect = 3e-61, Method: Composition-based stats. Identities = 106/621 (17%), Positives = 246/621 (39%), Gaps = 57/621 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYA 54 M+ N + L ++++A+ ++ P E++ + I+ +Q Sbjct: 1 MD--KNTLIGFLLIGVVLFAFS-WFNRPTPEQLEAQRRYQDSIAKIEYAQQLELQKQENK 57 Query: 55 AVLIDDRAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLN 93 + L++D + L S R L+N + I+ KG + Sbjct: 58 SALVEDSLENLPDSVRAQRLQQSFGVFGDAMVGTEDYTTLQNDVVELRISNKGGRICYAR 117 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ Y + L + ++ + N++ ++ + Sbjct: 118 LKEYDTYNDE---PLVLFDEKES------NFNFTLVTATNRVVNTSDLYFTPVKGNDPNS 168 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 ++L +++ F T+ D++ + + N + + + + Sbjct: 169 VIMRLNTGEGSHLDFTYTLKPDDYMVQYQILGTGLNGVLAPSTNALDLLWEQDIRQQEKG 228 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 ++ ++ + + ++ KS W+G D ++++V I + + Sbjct: 229 RKFEDRYVTLNYKFMADDVEHLSESKSDSKQIPNRLKWIGYKDMFFSTVLISQEGFEATT 288 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---F 330 + + + TT + G +F + ++K ++ + Sbjct: 289 LDSKAIPEGDVLKQFKTTASVPFDLQGKETTNLSFYFGPNKFALLKSFDKGVSAEQQLDL 348 Query: 331 EMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 E L+ GW + + L + + N+GI I+L T+ VK++ FPL K Y+S+A Sbjct: 349 EKLVPLGWGIFRWVNQYFVIPLFDFLGKFIHNYGILILLMTIIVKIILFPLTYKSYMSSA 408 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++P+++E+ K+ + ++ A ++LY +P++GC P+LLQ+P+ A++ Sbjct: 409 KMRVLRPQVEEINAKYPGQDKAMERQKATMELYSRAGASPMSGCLPMLLQMPILIALFMF 468 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQM 505 ++E+RH + W DL+ D + + +P P F H+ ++ ++M+++ Sbjct: 469 FPSAIELRHQS-FLWAHDLSTYDAIFSWNKY--IPIITPYFGNHISLFCLLMTITNIFYT 525 Query: 506 KMSPPPADKGQAMI------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 K + + GQ + + MP++F+ + + +GL Y+ S +I+IVQ +I + Sbjct: 526 KYNMEMTNTGQQQMPGMKAMMYMMPLMFLVFFNQYASGLTYYYFISTLITIVQT-LIFRY 584 Query: 560 HGAEIGLIDRLRSTFSKNYNS 580 E L+ +L + K Sbjct: 585 TINEDKLLAKLEANKRKPMKK 605 >gi|57167877|ref|ZP_00367017.1| 60 kDa inner-membrane protein [Campylobacter coli RM2228] gi|57020999|gb|EAL57663.1| 60 kDa inner-membrane protein [Campylobacter coli RM2228] Length = 531 Score = 241 bits (613), Expect = 3e-61, Method: Composition-based stats. Identities = 134/568 (23%), Positives = 253/568 (44%), Gaps = 59/568 (10%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL----- 57 + +A+ +S + + F++ + ++ Q Q N+ Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQQIKLEQNITTTQADSQNATNINAPQQNPQANLN 68 Query: 58 IDDRAQALSMSPRVE-LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + + + + +K+ I+ G + + L+ + + L+S N Sbjct: 69 VAATSNTIPQDKIIADIKSEHFEAQIDSLG-RIVNFYLQD-KKYQNEKGEAINLISKGN- 125 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 Y E+ + A N + + ++ I + + + ++++ E+ I+ Sbjct: 126 -LPYPLEMRFSDPAINTQAFSVPYAADMSEVFIDENGSKTLKLTQQLSDLIVEKKITFYS 184 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + I ++ N ++P A +++ V + + + Sbjct: 185 KGNYDIEVKLSKNIN-------YFISPGYRPSIAVDSYTVHGALVMDDQETIHTYEDGDM 237 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + +I N ++++ D+Y+A + F +K + N + Sbjct: 238 DKDENIKNAWMTSAF----DRYYA------------AFFYNFEKPLNVTISKDAQNNPLV 281 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 + G KE + + PR E ++++GWF FIAKPMF +++ +N Sbjct: 282 FAMSDNEFKAGGYMGPKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHNH 336 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GN+G AI++ + ++++ FPL K +S +K++ PK+ ELRE++K PQ + M+ Sbjct: 337 IGNWGWAIVIMVLIIRIILFPLTYKSMISMNKLKDLAPKMKELRERYKG-DPQKMNMHMM 395 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 396 ELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF---- 451 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 I PI+M ++MFIQ ++P D QA I+ ++P++F F +FP Sbjct: 452 ---------------ILPILMGVTMFIQQLITPMTIQDPMQAKIMKFLPIIFTFFFITFP 496 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 AGL +YW +N+ S+VQQ VI KM E Sbjct: 497 AGLTLYWFVNNLCSLVQQWVINKMFAKE 524 >gi|237756916|ref|ZP_04585388.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237690917|gb|EEP60053.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 515 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 118/571 (20%), Positives = 232/571 (40%), Gaps = 70/571 (12%) Query: 2 ERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQP-NQVDNSYAAV 56 + + A + +++ ++ Q F+ E N ++ + P QV SY V Sbjct: 5 DMQKRLMIFFAAAALLLISFSLVSQYFFKDNAQNEKNQTQQTEKEAAAPIKQVGGSYDLV 64 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 L +R A S+ V +K + G + Y++D+ Sbjct: 65 LSGERVNADSLKDIVRIKTKEGYVEFSNIGGRIVSAFDNRYNIDIVPE------------ 112 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 F++ + + I + T S + N+ E+T ++++ Sbjct: 113 ----FSKSNKIFPGEIITTDTNITKLLNFSKYESKIKDNKISFYLKNENVEVEKTYTIND 168 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + + + + E D Sbjct: 169 DNTITVDIKTKGLENVGLSYLTGVTLKSEGDFGHDGPIIKTDR-----------EIIRID 217 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + ++I + W G +KY+ + + Y + + + Sbjct: 218 NDINTIQTIRDKILWAGQENKYFMQIL------------SVKGGINTVYIVPVAKDTTVV 265 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-----RFEMLIDWGWFYFIAKPMFMLMS 351 L + F + G K + + ID+G+F + KP+F+L+ Sbjct: 266 LSEIPASFEGFNYLGPKLYSLLGEITDKYQKLWNVDLDLRSSIDFGFFGILGKPLFLLLH 325 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + Y+ V N+G+AI++ TV ++++ FPL K + M ++ P++++L++K+ + PQ L Sbjct: 326 FIYDFVHNWGLAIIVLTVLLRIVLFPLNHKSLKAMKKMADLAPEMEKLKKKYAK-DPQKL 384 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 ++ +++LY NP++GC PIL QIP+F A+Y V+ +++E+++APF WIKDL+ DP Sbjct: 385 REEIMKLYAEAGANPMSGCLPILAQIPIFIALYNVLMVTVELKNAPFMLWIKDLSDKDPY 444 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 + PI+M LSM +Q ++P DK Q MI+ + VF F Sbjct: 445 Y-------------------VLPILMGLSMVVQQFITPIS-DKNQRMIMYILAGVFTFMF 484 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +FP+GL++YW +N++ ++Q ++ K Sbjct: 485 MNFPSGLVLYWLTNNILGLIQSVIVNKSMKK 515 >gi|305432097|ref|ZP_07401264.1| inner membrane protein [Campylobacter coli JV20] gi|304445181|gb|EFM37827.1| inner membrane protein [Campylobacter coli JV20] Length = 531 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 134/568 (23%), Positives = 253/568 (44%), Gaps = 59/568 (10%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL----- 57 + +A+ +S + + F++ + ++ Q Q N+ Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQQIKLEQNITTTQADSQNATNINAPQQNPQANLN 68 Query: 58 IDDRAQALSMSPRVE-LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + + + + +K+ I+ G + + L+ + + L+S N Sbjct: 69 VAATSNTIPQDKIIADIKSEHFEAQIDSLG-RIVNFYLQD-KKYQNEKGEAINLISKGN- 125 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 Y E+ + A N + + ++ I + + + ++++ E+ I+ Sbjct: 126 -LPYPLEMRFSDPAINTQAFSVPYAADMSEVFIDENGSKTLKLTQQLSDLIVEKKITFYS 184 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + I ++ N ++P A +++ V + + + Sbjct: 185 KGNYDIEVKLSKNIN-------YFISPGYRPSIAVDSYTVHGALVMDDQETIHTYEDGDM 237 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + +I N ++++ D+Y+A + F +K + N + Sbjct: 238 DKDENIKNAWMTSAF----DRYYA------------AFFYNFEKPLNVTISKDAQNNPLV 281 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 + G KE + + PR E ++++GWF FIAKPMF +++ +N Sbjct: 282 FVMSDNEFKAGGYMGPKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHNH 336 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GN+G AI++ + ++++ FPL K +S +K++ PK+ ELRE++K PQ + M+ Sbjct: 337 IGNWGWAIVIMVLIIRIILFPLTYKSMISMNKLKDLAPKMKELRERYKG-DPQKMNMHMM 395 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 396 ELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF---- 451 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 I PI+M ++MFIQ ++P D QA I+ ++P++F F +FP Sbjct: 452 ---------------ILPILMGVTMFIQQLITPMTIQDPMQAKIMKFLPIIFTFFFITFP 496 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 AGL +YW +N+ S+VQQ VI KM E Sbjct: 497 AGLTLYWFVNNLCSLVQQWVINKMFAKE 524 >gi|301311160|ref|ZP_07217088.1| inner membrane protein OxaA [Bacteroides sp. 20_3] gi|300830734|gb|EFK61376.1| inner membrane protein OxaA [Bacteroides sp. 20_3] Length = 633 Score = 240 bits (611), Expect = 6e-61, Method: Composition-based stats. Identities = 106/621 (17%), Positives = 244/621 (39%), Gaps = 57/621 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYA 54 M+ N + L ++++A+ ++ P E++ + I+ +Q Sbjct: 1 MD--KNTLIGFLLIGVVLFAFS-WFNRPTPEQLEAQRRYQDSIAKIEYAQQLELQKQENK 57 Query: 55 AVLIDDRAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLN 93 + L++D + L S R L+N + I+ KG + Sbjct: 58 SALVEDSLENLPDSVRAQRLQQSFGVFGEAMVGTEDYTTLQNDVVELRISNKGGRICYAR 117 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ Y + L + ++ + N+ ++ + Sbjct: 118 LKEYDTYNDE---PLVLFDEKES------NFNFTLVTATNRVVNTGDLYFTPVKGNDPNS 168 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 ++L +++ F T+ D++ + + N + + + + Sbjct: 169 VIMRLNTGEGSHLDFTYTLKPDDYMVQYQILGTGLNGVLAPSTNALDLLWEQDIRQQEKG 228 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 ++ ++ + + ++ KS W+G D ++++V I + + Sbjct: 229 RKFEDRYVTLNYKFMADDVEHLSESKSDSKQIPNRLKWIGYKDMFFSTVLISQEGFEATT 288 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---F 330 + + + T L+ G +F + ++K + + Sbjct: 289 LDSKAIPEGDVLKQFKTTTSVPFDLQGKEATNLSLYFGPNKFALLKSFDKGVVAEQQLDL 348 Query: 331 EMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 E L+ GW + + L + + N+GI I+L T+ VK++ FPL K Y+S+A Sbjct: 349 EKLVPLGWGIFRWVNQYFVIPLFDFLGKFIHNYGILILLMTIIVKIILFPLTYKSYMSSA 408 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++P+++E+ K+ + ++ A ++LY +P++GC P+LLQ+P+ A++ Sbjct: 409 KMRVLRPQVEEINAKYPGQDKAMERQKATMELYSRAGASPMSGCLPMLLQMPILIALFMF 468 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQM 505 ++E+RH + W DL+ D + + +P P F H+ ++ ++M+++ Sbjct: 469 FPSAIELRHQS-FLWAHDLSTYDAIFSWNKY--IPIITPYFGNHISLFCLLMTITNIFYT 525 Query: 506 KMSPPPADKGQAMI------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 K + + GQ + + MP++F+ + + +GL Y+ S +I+IVQ +I + Sbjct: 526 KYNMEMTNTGQQQMPGMKAMMYMMPLMFLVFFNQYASGLTYYYFISTLITIVQT-LIFRY 584 Query: 560 HGAEIGLIDRLRSTFSKNYNS 580 E L+ +L + K Sbjct: 585 TINEDKLLAKLEANKRKPMKK 605 >gi|150007175|ref|YP_001301918.1| putative inner membrane protein translocase component YidC [Parabacteroides distasonis ATCC 8503] gi|166975877|sp|A6L9D2|OXAA_PARD8 RecName: Full=Inner membrane protein oxaA gi|149935599|gb|ABR42296.1| membrane protein, putative [Parabacteroides distasonis ATCC 8503] Length = 633 Score = 240 bits (611), Expect = 6e-61, Method: Composition-based stats. Identities = 105/621 (16%), Positives = 245/621 (39%), Gaps = 57/621 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYA 54 M+ N + L ++++A+ ++ P E++ + I+ +Q Sbjct: 1 MD--KNTLIGFLLIGVVLFAFS-WFNRPTPEQLEAQRRYQDSIAKIEYAQQLELQKQENK 57 Query: 55 AVLIDDRAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLN 93 + L++D + L S R L+N + I+ KG + Sbjct: 58 SALVEDSLENLPDSVRAQRLQQSFGVFGDAMVGTEDYTTLQNDVVELRISNKGGRICYAR 117 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ Y + L + ++ + N++ ++ + Sbjct: 118 LKEYDTYNDE---PLVLFDEKES------NFNFTLVTATNRVVNTSDLYFTPVKGNDPNS 168 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 ++L +++ F T+ D++ + + N + + + + Sbjct: 169 VIMRLNTGEGSHLDFTYTLKPDDYMVQYQILGTGLNGVLAPSTNALDLLWEQDIRQQEKG 228 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 ++ ++ + + ++ KS W+G D ++++V I + + Sbjct: 229 RKFEDRYVTLNYKFMADDVEHLSESKSDSKQIPNRLKWIGYKDMFFSTVLISQEGFEATT 288 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---F 330 + + + T + G +F + ++K ++ + Sbjct: 289 LDSKAIPEGDVLKQFKTTASVPFDLQGKEATNLSFYFGPNKFALLKSFDKGVSAEQQLDL 348 Query: 331 EMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 E L+ GW + + L + + N+GI I+L T+ VK++ FPL K Y+S+A Sbjct: 349 EKLVPLGWGIFRWVNQYFVIPLFDFLGKFIHNYGILILLMTIIVKIILFPLTYKSYMSSA 408 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++P+++E+ K+ + ++ A ++LY +P++GC P+LLQ+P+ A++ Sbjct: 409 KMRVLRPQVEEINAKYPGQDKAMERQKATMELYSRAGASPMSGCLPMLLQMPILIALFMF 468 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQM 505 ++E+RH + W DL+ D + + +P P F H+ ++ ++M+++ Sbjct: 469 FPSAIELRHQS-FLWAHDLSTYDAIFSWNKY--IPIITPYFGNHISLFCLLMTITNIFYT 525 Query: 506 KMSPPPADKGQAMI------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 K + + GQ + + MP++F+ + + +GL Y+ S +I+IVQ +I + Sbjct: 526 KYNMEMTNTGQQQMPGMKAMMYMMPLMFLVFFNQYASGLTYYYFISTLITIVQT-LIFRY 584 Query: 560 HGAEIGLIDRLRSTFSKNYNS 580 E L+ +L + K Sbjct: 585 TINEDKLLAKLEANKRKPMKK 605 >gi|255015211|ref|ZP_05287337.1| putative inner membrane protein translocase component YidC [Bacteroides sp. 2_1_7] Length = 633 Score = 239 bits (610), Expect = 8e-61, Method: Composition-based stats. Identities = 105/621 (16%), Positives = 245/621 (39%), Gaps = 57/621 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYA 54 M+ N + L ++++A+ ++ P E++ + I+ +Q Sbjct: 1 MD--KNTLIGFLLIGVVLFAFS-WFNRPTPEQLEAQRRYQDSIAKIEYAQQLELQKQENK 57 Query: 55 AVLIDDRAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLN 93 + L++D + L S R L+N + I+ KG + Sbjct: 58 SALVEDSLENLPDSVRAQRLQQSFGVFGDAMVGTEDYTTLQNDVVELRISNKGGRICYAR 117 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ Y + L + ++ + N++ ++ + Sbjct: 118 LKEYDTYNDE---PLVLFDEKES------NFNFTLVTATNRVVNTSDLYFTPVKGNDPNS 168 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 ++L +++ F T+ D++ + + N + + + + Sbjct: 169 VIMRLNTGEGSHLDFTYTLKPDDYMVQYQILGTGLNGVLAPSTNALDLLWEQDIRQQEKG 228 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 ++ ++ + + ++ KS W+G D ++++V I + + Sbjct: 229 RKFEDRYVTLNYKFMADDVEHLSESKSDSKQIPNRLKWIGYKDMFFSTVLISQEGFEATT 288 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---F 330 + + + T + G +F + ++K ++ + Sbjct: 289 LDSKAIPEGDVLKQFKTTASVPFDLQGKEATNLSFYFGPNKFALLKSFDKGVSAEQQLDL 348 Query: 331 EMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 E L+ GW + + L + + N+GI I+L T+ VK++ FPL K Y+S+A Sbjct: 349 EKLVPLGWGIFRWVNQYFVIPLFDFLGKFIHNYGILILLMTIIVKIILFPLTYKSYMSSA 408 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++P+++E+ K+ + ++ A ++LY +P++GC P+LLQ+P+ A++ Sbjct: 409 KMRVLRPQVEEINAKYPGQDKAMERQKATMELYSRAGASPMSGCLPMLLQMPILIALFMF 468 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQM 505 ++E+RH + W DL+ D + + +P P F H+ ++ ++M+++ Sbjct: 469 FPSAIELRHQS-FLWAHDLSTYDAIFSWNKY--IPIITPYFGNHISLFCLLMTITNIFYT 525 Query: 506 KMSPPPADKGQAMI------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 K + + GQ + + MP++F+ + + +GL Y+ S +I+IVQ +I + Sbjct: 526 KYNMEMTNTGQQQMPGMKAMMYMMPLMFLVFFNQYASGLTYYYFISTLITIVQT-LIFRY 584 Query: 560 HGAEIGLIDRLRSTFSKNYNS 580 E L+ +L + K Sbjct: 585 TINEDKLLAKLEANKRKPMKK 605 >gi|213622860|ref|ZP_03375643.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 470 Score = 239 bits (609), Expect = 1e-60, Method: Composition-based stats. Identities = 115/490 (23%), Positives = 209/490 (42%), Gaps = 33/490 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI DL+A Sbjct: 402 -QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHDLSA 460 Query: 468 ADPTNIFTLF 477 DP I + Sbjct: 461 QDPYYILPIL 470 >gi|305667728|ref|YP_003864015.1| putative inner membrane protein translocase component YidC [Maribacter sp. HTCC2170] gi|88707565|gb|EAQ99807.1| putative inner membrane protein translocase component YidC [Maribacter sp. HTCC2170] Length = 619 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 114/612 (18%), Positives = 225/612 (36%), Gaps = 50/612 (8%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME N + L I+ + + P EE+ ++ + V+ + D + Sbjct: 1 MEEKKFDINSIIGFVLIFGILI-FMFYQNKPTAEEIEAKKAEQEQVEAAAKQDEVQEVKI 59 Query: 58 IDDRAQALSMSPRV--------------------ELKNPSLIGSINLKGAQFDDLNLRGY 97 + S + L+N + I+ KG Q + +R + Sbjct: 60 AEPETINFQDSTAIANYKSTIGAFGYTAPSEAVTTLENELVTLKISNKGGQIVEATMRNF 119 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 V+ +S V L+ N A + ++ + N+ ++ S + Sbjct: 120 ---VTYDSVPVYLVKDGN------ASFGLNFSTSDNRVLNTKDLFFEPSMSNNDNNQVLS 170 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + K A + E + + + I + + Sbjct: 171 MKAKVAPDKYLEYRYEMKPNDYLVDFTIRSQGLNGVINSGNPIHLEWKLKGIRQSKSIQY 230 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 E L + E S E WL +++S+ + Sbjct: 231 ENRYTRLTYNHEDGKISKLSEGSDDEETEEDIKWLSYRQHFFSSILATKENFKKADLSSV 290 Query: 278 LSDGHARYQAKFS----ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 A F+ + L G ++ + G + + Y++ Sbjct: 291 NHVEEESRTAGFTKSYDSKIELELNGGELSQNMHWYYGPTDVDVLSDYDELGLADSI--P 348 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 WG F +I + +F + +GIAI++ T+ V+L P+ K Y+S A MK ++ Sbjct: 349 FGWGIFGWINRYIFTPFYSLLSTYFPYGIAIVIMTILVRLAMSPVTYKSYLSQAKMKVLK 408 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P+I EL EK+K + + Q+ ++LY ++P++GC P LQ+P+F+A++ S + Sbjct: 409 PEISELGEKYKDNAMKK-QQETMKLYNKAGVSPMSGCVPAFLQMPIFYALFMFFPTSFAL 467 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS----- 508 R + W DL++ D F +PFY H+ ++PI+ S+++F M M+ Sbjct: 468 RQK-AFLWADDLSSFDTIYQFPEGFSIPFYG---DHISLFPILASVAIFFYMMMTTGQNM 523 Query: 509 -PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P I+ MP + +F +++ +GL +Y+ SN+I+I VI + + + Sbjct: 524 PQQPGMPNMKFIMYLMPFMMLFFFNNYASGLSLYYFVSNLITIGIMLVIKRFILDDDKIH 583 Query: 568 DRLRSTFSKNYN 579 +++ K Sbjct: 584 AQIQENKQKPKK 595 >gi|284097721|ref|ZP_06385731.1| 60 kDa inner membrane insertion protein [Candidatus Poribacteria sp. WGA-A3] gi|283830767|gb|EFC34867.1| 60 kDa inner membrane insertion protein [Candidatus Poribacteria sp. WGA-A3] Length = 485 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 116/479 (24%), Positives = 194/479 (40%), Gaps = 44/479 (9%) Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN---NIELPNSNTVW 142 GAQ L+ Y + + + P A S N N L + + Sbjct: 1 GAQIQSWKLKQYLTQDEDDPEPIEFVYPEGHFAGPLALQVEDSDVNAMLNDGLFEVSRDF 60 Query: 143 NLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRI 202 + + T + N ++ + + YL + V Sbjct: 61 DTLDDVHPTGHLTLSYRNDENNILVEKEFTFTHDSYLVDVAIRVAGLDDAVGV----LLG 116 Query: 203 MRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASV 262 G ++ + E W + DKY+ SV Sbjct: 117 TNFGMVEWGQGLIGALGPAWMIDGELEKE------TPDPEIRRSGDIRWAALQDKYFISV 170 Query: 263 FIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 IP ++ + ++ + + L+AG K+F + Sbjct: 171 MIPQGAQGVFAKAETDYV--------VTSGVEFPVEAEGSRLRFQLYAGPKQFDLMRSLG 222 Query: 323 KD-LAIPRFEMLID--WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 F I W +AKP+F ++ + Y N+G+AI+L T +KLLF PL Sbjct: 223 HSLEDTIDFGWFIYGSWSVVKAVAKPLFYVLRFLYEYTQNYGVAIILLTCGIKLLFVPLQ 282 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K Y S M+ IQPKI ++ KFK+ + L + +++LYK H +NP+ GC P++LQ+PV Sbjct: 283 YKSYKSMQGMQKIQPKIQAVQAKFKE-DRERLNRELMKLYKEHKVNPVGGCLPMVLQMPV 341 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F +++ ++ +++++R+APF WI DL+ DP ++PI+M Sbjct: 342 FISLFNILYMTVDLRNAPFALWITDLSIPDPFY-------------------VFPILMGA 382 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 SM +Q K+ P D QA ++ +PV F +FPAGL+IYW +NV++I QQ V + Sbjct: 383 SMVLQQKIMPTTMDPTQAKMMLLLPVFLTFLFLNFPAGLVIYWLTNNVLTIGQQVVTDR 441 >gi|153951835|ref|YP_001397950.1| putative inner membrane protein translocase component YidC [Campylobacter jejuni subsp. doylei 269.97] gi|152939281|gb|ABS44022.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. doylei 269.97] Length = 530 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 132/564 (23%), Positives = 253/564 (44%), Gaps = 55/564 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + +A+ +S + + F++ + ++ + + + Sbjct: 9 QQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNIPNIQNTTTNTPS 68 Query: 63 QAL--SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 AL S ++++ I+ G + L+ + + L+S N+ Y Sbjct: 69 AALVSQDSMISKVQSKHFEAQIDSFG-RISAFYLKD-KKYQNEKGEFINLVSKENS--PY 124 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E+ + + N E N + + + + + +N + + E+ I+ + Sbjct: 125 PLEMRFSDPSINSEAFKIPYAANANNLFVDENGSQVLKLTQNLSGLKIEKDITFYAKGNY 184 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 +I ++ N+ ++P A +++ V + + + + Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALVVDNKETIETYKDGDVEKDE 237 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 S +N ++++ D+Y+A + F +K + + Sbjct: 238 SANNVVMTSAF----DRYYA------------NFFYNFDKPLNVAISKDANKNPIVFAYS 281 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + G+KE + + PR E ++++GWF FIAKPMF +++F+ +GN+ Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFFHQYIGNW 336 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K PQ + M++LYK Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLI 539 I PI+M +MF+Q ++P D QA I+ ++PV+F F +FPAGL Sbjct: 448 -----------ILPILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLT 496 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW +N+ S+VQQ VI K+ E Sbjct: 497 LYWFVNNLCSLVQQWVINKIFAKE 520 >gi|256840550|ref|ZP_05546058.1| inner membrane protein oxaA [Parabacteroides sp. D13] gi|262381171|ref|ZP_06074309.1| inner membrane protein oxaA [Bacteroides sp. 2_1_33B] gi|256737822|gb|EEU51148.1| inner membrane protein oxaA [Parabacteroides sp. D13] gi|262296348|gb|EEY84278.1| inner membrane protein oxaA [Bacteroides sp. 2_1_33B] Length = 633 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 104/621 (16%), Positives = 243/621 (39%), Gaps = 57/621 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYA 54 M+ N + L ++++A+ ++ P E++ + I+ +Q Sbjct: 1 MD--KNTLIGFLLIGVVLFAFS-WFNRPTPEQLEAQRRYQDSIAKIEYAQQLELQKQENK 57 Query: 55 AVLIDDRAQALSMSPR---------------------VELKNPSLIGSINLKGAQFDDLN 93 + L++D + + S R L+N + I+ KG + Sbjct: 58 SALVEDSLENVPDSVRAQRLQQSFGVFGEAMVGTEDYTTLQNNLVELRISNKGGRICYAR 117 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ Y + L + ++ + N+ ++ + Sbjct: 118 LKEYDTYNDE---PLVLFDEKES------NFNFTLVTATNRVVNTGDLYFTPVKGNDPNS 168 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 ++L +++ F T+ D++ + + N + + + + Sbjct: 169 VIMRLNTGEGSHLDFTYTLKPDDYMVQYQILGTGLNGVLAPSTNALDLLWEQDIRQQEKG 228 Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS 273 ++ ++ + + ++ KS W+G D ++++V I + + Sbjct: 229 RKFEDRYVTLNYKFMADDVEHLSESKSDSKQIPNRLKWIGYKDMFFSTVLISQEGFEATT 288 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---F 330 + + + T + G +F + ++K + + Sbjct: 289 LDSKAIPEGDVLKQFKTTTSVPFDLQGKEATNLSFYFGPNKFALLKSFDKGVVAEQQLDL 348 Query: 331 EMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 E L+ GW + + L + + N+GI I+L T+ VK++ FPL K Y+S+A Sbjct: 349 EKLVPLGWGIFRWVNQYFVIPLFDFLGKFIHNYGILILLMTIIVKIILFPLTYKSYMSSA 408 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++P+++E+ K+ + ++ A ++LY +P++GC P+LLQ+P+ A++ Sbjct: 409 KMRVLRPQVEEINAKYPGQDKAMERQKATMELYSRAGASPMSGCLPMLLQMPILIALFMF 468 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQM 505 ++E+RH + W DL+ D + + +P P F H+ ++ ++M+++ Sbjct: 469 FPSAIELRHQS-FLWAHDLSTYDAIFSWNKY--IPIITPYFGNHISLFCLLMTITNIFYT 525 Query: 506 KMSPPPADKGQAMI------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 K + + GQ + + MP++F+ + + +GL Y+ S +I+IVQ +I + Sbjct: 526 KYNMEMTNTGQQQMPGMKAMMYMMPLMFLVFFNQYASGLTYYYFISTLITIVQT-LIFRY 584 Query: 560 HGAEIGLIDRLRSTFSKNYNS 580 E L+ +L + K Sbjct: 585 TINEDKLLAKLEANKRKPMKK 605 >gi|90408841|ref|ZP_01216983.1| tRNA modification GTPase [Psychromonas sp. CNPT3] gi|90310068|gb|EAS38211.1| tRNA modification GTPase [Psychromonas sp. CNPT3] Length = 331 Score = 237 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 113/350 (32%), Positives = 181/350 (51%), Gaps = 29/350 (8%) Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 G + + K+ D++ +++ W+ + Y+ + +IPS + Sbjct: 1 MMMSAYRGGAFSTTETRYGKYKFDDMQDAALKET-TKGGWVAMLQHYFVAAWIPSVDD-- 57 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 + F A T+ T + L+ G K + + Sbjct: 58 TNVLYSNVIRGTDAAIGFKAPVQTVEAHSEKTISADLWVGPKLQDEMAEVAS-----HLD 112 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + +D+GW +FIA+P+F L+ +F +VGN+G+AI+L T VK +PL K QY S A M+ Sbjct: 113 LTVDYGWLWFIAQPLFKLLLFFQGIVGNWGVAIILITFTVKGALYPLTKAQYTSMAKMRL 172 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QPKI ELRE++K Q + K+M++LYK +NPL GC+PILLQ+P+F A+Y + ++ Sbjct: 173 LQPKIKELRERYKD-DRQKISKSMMELYKKEKVNPLGGCFPILLQMPIFIALYWSLMEAV 231 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 ++RHAPF WI+DL+ DP I PI+M +SMF KMSP Sbjct: 232 QLRHAPFVLWIQDLSVQDPYY-------------------IMPILMGVSMFFIQKMSPTQ 272 Query: 512 -ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 D Q I+ +MP++F F FPAGL++YW SN+++++QQ +I + Sbjct: 273 VEDPMQQKIMKFMPIIFTFFFLWFPAGLVLYWLMSNIVTLIQQTIIFRQF 322 >gi|124516563|gb|EAY58071.1| putative inner-membrane protein [Leptospirillum rubarum] Length = 511 Score = 237 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 122/554 (22%), Positives = 229/554 (41%), Gaps = 67/554 (12%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 I +S ++ ++ P + ++ P Q ++ + +++D Sbjct: 8 IALIVISFNLII---YYFWGP--------QNRQKSSTTPKQAISALSLPMVNDIYD---- 52 Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA---YFAEL 124 + ++N + S++L+ Q L YH S+ ++LL + + Sbjct: 53 -QSLSIQNKDVRWSVSLRTGQIYKWTLLHYHHS--SDHKYLSLLDTQKGYAGMGLFSRDS 109 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 + + N + + + + ++ N++ R L YL Sbjct: 110 GTLVPVLPESIVWENNQIHPGLVVVSSTGGNLVETYRIKGNVVTLRMHFLPSGYLVSAHL 169 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 ++ + K T G K+ +++K Sbjct: 170 ENPSHVNVVFGSGLNFGVSALKQTYGTEFQGPVYEGAG----------KFQEVKKDGSLF 219 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 F W+G DKY+ S + K + + + Sbjct: 220 FDSGLKWVGNEDKYFIGYIASSTPG-------------FSVEIKKNGSSSWFQLLSKNSI 266 Query: 305 TNFLFAGAKEFPTIHHYEKD-LAIPRFEMLID--WGWFYFIAKPMFMLMSYFYNLVGNFG 361 ++ K + + + + F + F+AKP+F+LMSY +V N+G Sbjct: 267 DFKIYGEPKRYKLLKEQDSGLIDTIDFGWFMFGRILLISFLAKPIFLLMSYLVGIVHNYG 326 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+L T+ +K++F PLA Y S M+++QP+I +L+ KFK L +A+++LYK Sbjct: 327 VAIILVTILIKIIFSPLAYMSYKSIYEMQSLQPEIKKLQTKFKDDKA-ALNQALMELYKE 385 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 +NPL GC P+L+QIPVF A+Y +++ ++E+R APF WI DL+ DP Sbjct: 386 RRVNPLGGCLPMLVQIPVFVALYNILNNTVELRQAPFILWIHDLSLKDPYY--------- 436 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 + PI+M ++M +Q K++P D Q ++ ++PV+ F +FPAGL++Y Sbjct: 437 ----------VLPIVMGITMILQYKLNPSSPDPVQQKVMMFVPVIMTFFFLNFPAGLVLY 486 Query: 542 WSWSNVISIVQQAV 555 W +NV++I QQ + Sbjct: 487 WLVNNVLTIGQQYL 500 >gi|260062422|ref|YP_003195502.1| putative inner membrane protein translocase component YidC [Robiginitalea biformata HTCC2501] gi|88783985|gb|EAR15156.1| putative inner membrane protein translocase component YidC [Robiginitalea biformata HTCC2501] Length = 616 Score = 237 bits (603), Expect = 5e-60, Method: Composition-based stats. Identities = 117/620 (18%), Positives = 236/620 (38%), Gaps = 63/620 (10%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP----------- 46 ME N + L I+ W + P EE+ +++ + V+ Sbjct: 1 MEEKKLDINSIIGFVLIFGILIYW-FYTNQPTPEEVEAQKQATEQVQDSIRRAEAAAAPQ 59 Query: 47 ---------NQVDNSYAAVLIDDRAQALSMSPRVE----LKNPSLIGSINLKGAQFDDLN 93 + ++S A R A S +P VE L+N L I+ KG + + Sbjct: 60 QAATPAATVPEGNDSLARAAYASRIGAFSYTPAVEGTTLLENDVLSLEISNKGGEIVEAR 119 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 ++ + V+ +S V L+ N A+ T ++ + N+ ++ + Sbjct: 120 MKQF---VNHDSLPVYLVREGN------AQFSLEITTSDNRVLNTRDLFFEPTLSREGEN 170 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVD--TVTNNSIDQIRFSPRGRIMRHKPQTAT 211 + + + E ++ D + + R + + + Sbjct: 171 SVLSMKAMAGPRQFLEYRYTIRPGEYLLDFDIRSQGLSLSASKGVPLRWSLRAIRHDPSV 230 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + W+ +++S+ + Sbjct: 231 MYENRYTRLTYRHEGDDISKLS----ASGEDDETESEVRWMSFRQHFFSSILAVDEPLDT 286 Query: 272 HSQFKYL----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + + +FS + G ++ + + G + + YE Sbjct: 287 VTLTSNDLVEEESSETAFTKEFSIASELPVTGGELSRSMQWYFGPTDIDVLEQYEDLALA 346 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 WG F +I + +F F FGIAI++ T+ V++L P+ K Y+S A Sbjct: 347 DSI--PFGWGIFGWINRYIFTPFYGFLASFLPFGIAIVVMTIIVRILMSPVTYKSYLSQA 404 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ ++P+I E+ EK+K + + Q+A ++LY ++PL+GC P LLQ+P+F+A++ Sbjct: 405 KMRVLKPEITEINEKYKDNAMKK-QQATMKLYNKAGVSPLSGCIPALLQLPIFYALFMFF 463 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504 S +R + W +DL++ D I L +PFY HV ++PI+ S+++F Sbjct: 464 PTSFALRQKS-FLWAEDLSSYD--TIAQLPFSIPFYG---DHVSLFPILASVAIFFYMMM 517 Query: 505 ---MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +M P I+ P++ +F +++ +GL +Y+ SN+I+I VI + Sbjct: 518 TTGQQMQTQPGMPNMKFIMYLSPLMMLFFFNNYASGLSLYYFVSNLITIGIMLVIKNVIL 577 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 E + +++ K + Sbjct: 578 DEEKIHAQIQEQ-KKKPRKE 596 >gi|225164119|ref|ZP_03726399.1| 60 kDa inner membrane insertion protein [Opitutaceae bacterium TAV2] gi|224801254|gb|EEG19570.1| 60 kDa inner membrane insertion protein [Opitutaceae bacterium TAV2] Length = 616 Score = 237 bits (603), Expect = 5e-60, Method: Composition-based stats. Identities = 110/586 (18%), Positives = 208/586 (35%), Gaps = 38/586 (6%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS--------Y 53 N + + V A + TV P + Sbjct: 1 MDKKNLILGVTFLVAAFAALLYSSRQQSQQRPPAPPSPAPTVSAPATAGDPLASAATAAP 60 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A A + + L N + G D+ L+ Y + + P V Sbjct: 61 ANTTFAPIASNKTEATITTLSNDYVEVRFTNFGGAIRDVALKKYPAAIGAAKPFVFNEEH 120 Query: 114 SNTKNAYFAELDY-------VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 ++ + + +A E+ + P + + Sbjct: 121 ADPILGFTDIAGLDKEARFELVSATADEVVFRAVFEKRLEVTRRYVLAPATGDKSSRDPY 180 Query: 167 LFERTISLDEHYLFKIVDTVTNNS-IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 ++ T N S + + G Sbjct: 181 RILHETTVKNLADHTTPVTSLNLSLGTAALMGANDTGFYLNVASYNGDKAQFTDRNELKG 240 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE-----TSFHSQFKYLSD 280 D + W + ++++AS++ P + T F Sbjct: 241 GGFFASMGMGDPNPKAYIIQPGPVQWASVKNQFFASIYTPDDKLIEGVTVRRVSFAAPLP 300 Query: 281 GHARYQAKFSANE----ITILPGKSITTTNFLFAGAKEFPTIHHYEK-DLAIPRFEMLID 335 G +A+ I P + T T L+ G KE+ + ++ + + + +F+ Sbjct: 301 GTTTENIGLTASAKVELPAIAPQGTATFTGKLYVGPKEYTRLKNFTRGEDKVMQFDRYFF 360 Query: 336 WGWF--YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F IA M M+M+ + VGN+G+AI+L T+ +K + P S M+ +Q Sbjct: 361 NRIFLSGVIAPFMNMMMNGIHAFVGNWGLAIVLMTLILKTVTLPFTLAASRSAKRMQKLQ 420 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P + E+ EK+K +P + +A++ L+K H +NP+ GC P+L+ IP+F A + ++ + E+ Sbjct: 421 PMMKEINEKYKDNPTKK-NQAVMALFKEHKVNPMGGCLPVLITIPLFVAFFAMLQGTAEL 479 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512 R + W +DL+A D L + + + I P++M +M QM+++P P+ Sbjct: 480 RFQS-FLWARDLSAPDTIARIPLGFM-------TLPINILPLLMGATMVFQMRLTPSPSV 531 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D QA I MP +F +F L +Y + + + +IVQQ + + Sbjct: 532 DNAQAKIFKMMPWIFTIICYNFSCALALYSTINGLYTIVQQLAVNR 577 >gi|511459|gb|AAA56919.1| 60 kDa inner membrane protein [Coxiella burnetii] Length = 487 Score = 237 bits (603), Expect = 5e-60, Method: Composition-based stats. Identities = 109/490 (22%), Positives = 206/490 (42%), Gaps = 26/490 (5%) Query: 1 MERNWNYFVAIA---LSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ + + L++ + AWQ Y E+ ++ Sbjct: 1 MDI-KRIILYVIVALLAIALFNAWQRDYPPTPKPTPTVEQPTANGDHPTAYTPPAFTPGA 59 Query: 58 IDDRAQA--------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + +A + + + ++ L I+ +G L Y + + V Sbjct: 60 AEKTKKAGTIAFTSKVPEARLITVRTDVLDVEIDTQGGNIVSAKLPKYPVSLEEKQTPVQ 119 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 +LS Y A+ + + + ++L + + +L Sbjct: 120 ILSGE-PNELYIAQSGLTNGNGQPTTVQFESEKKQYVLENGQNQLIVQLTGRAPDGLLVT 178 Query: 170 RTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 +T + + Y + V NN+ + S +I R +P T + F V+ A +G Sbjct: 179 KTYTFHRDDYAIHLAYQVKNNTSKPWQGSLYTQITRRQPPTEHHHFYVRSYNGASMGSPQ 238 Query: 229 --LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL---SDGHA 283 + Y ++K +I +S W+ + Y+ S ++P + + ++ SD Sbjct: 239 TPYEKLSYESLDKQNIDRTSQS-GWIAMQQHYFLSAWVPGNPELTYHYYSHVIPASDEPN 297 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 Y F + ++ + G T L+ G + + P E ID+GW + I+ Sbjct: 298 VYVVGFVSPQMNVAAGSEAATHATLYVGPEIAKRLKGLA-----PGLERTIDYGWLWPIS 352 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +F ++S + +V N+G +I++TT+ +K++F+ + K + S A M+ +QP+I L+E+ Sbjct: 353 MLLFWILSAVHAVVKNWGWSIIITTILIKIVFYWFSAKSFRSMARMREMQPRIQALKERH 412 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 Q L +A ++LY+ INPL GC P+L+Q+PVF A Y VI S+++R APF WI Sbjct: 413 GD-DRQALSRATMELYRKEKINPLGGCLPMLIQVPVFIAFYYVIIESVQLRQAPFIFWIH 471 Query: 464 DLAAADPTNI 473 DL+ DP I Sbjct: 472 DLSVKDPYYI 481 >gi|206603435|gb|EDZ39915.1| Putative inner-membrane protein [Leptospirillum sp. Group II '5-way CG'] Length = 511 Score = 237 bits (603), Expect = 5e-60, Method: Composition-based stats. Identities = 122/558 (21%), Positives = 225/558 (40%), Gaps = 67/558 (12%) Query: 5 WNYF-VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 +A+ + + + + R + ++ I + P D Sbjct: 3 KRLLPIALIVISFNLIIYYFWGPQNRQKPSTTPKQAISALSVPMVND------------- 49 Query: 64 ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA---Y 120 + + ++N + S++++ Q L YH SN ++LL + Sbjct: 50 --TYDQSLSIQNKDVRWSVSMRTGQIYQWTLLHYHHS--SNHKYLSLLDTEKGYAGMGLF 105 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 + + + N + + + +K N++ R L YL Sbjct: 106 SRDSGTLVPVLPESIVWDNAQIRPGLVVVSSAGGNLVETYKMNGNVVILRFHFLPSGYLI 165 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 +++ + K T G K+ +++K Sbjct: 166 SSHLENPSHANVVFGSGLNFGVSALKQTYGTEFQGPVYEATG----------KFQEMKKD 215 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 F W+G DKY+ S + K + + Sbjct: 216 GSLFFDSGLKWVGNEDKYFIGYIASSTPGP-------------SVEIKKNGSSSWFQLLS 262 Query: 301 SITTTNFLFAGAKEFPTIHHYEKD-LAIPRFEMLID--WGWFYFIAKPMFMLMSYFYNLV 357 + ++ K + + + + F + F+AKP+F+LMSY +V Sbjct: 263 KNSMDFKIYGEPKRYKLLKEQDSGLIDTIDFGWFMFGRILLISFLAKPIFLLMSYLVGIV 322 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+L T+ +K++F PLA Y S M+++QP+I +L+ KFK L +A+++ Sbjct: 323 HNYGVAIILVTILIKIIFSPLAYMSYKSIYEMQSLQPEIKKLQTKFKDDKA-ALNQALME 381 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPL GC P+L+QIPVF A+Y +++ ++E+R APF WI DL+ DP Sbjct: 382 LYKERRVNPLGGCLPMLVQIPVFVALYNILNNTVELRQAPFILWIHDLSLKDPYY----- 436 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 + PI+M ++M +Q K++P D Q ++ ++PV+ F +FPAG Sbjct: 437 --------------VLPIVMGITMILQYKLNPSSPDPVQQKVMMFVPVIMTFFFLNFPAG 482 Query: 538 LIIYWSWSNVISIVQQAV 555 L++YW +NV++I QQ + Sbjct: 483 LVLYWLVNNVLTIGQQYL 500 >gi|254457731|ref|ZP_05071159.1| 60 kDa inner membrane insertion protein [Campylobacterales bacterium GD 1] gi|207086523|gb|EDZ63807.1| 60 kDa inner membrane insertion protein [Campylobacterales bacterium GD 1] Length = 541 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 122/562 (21%), Positives = 230/562 (40%), Gaps = 66/562 (11%) Query: 9 VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS 68 +A+A+SVI A+ + E + +K Q + D S ++ S+S Sbjct: 2 LAVAMSVIFFVAYTAIFPPAEPENLAANKKVEQVKNVGSNQDASLQVSSNLEQTTGHSIS 61 Query: 69 P-----------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + N I ++ G + L + L+ + K Sbjct: 62 EVEKYGSSDANTILTVTNKDFILKVDTLG-RISSKELLQDKFKTKED-KHAQLIPSTGMK 119 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDE 176 + LD + + + ++ I TP K+ ++++ + ++ Sbjct: 120 PLFIRFLDEILNNESTRVA-----YSASINNIALDGTPQKVTLTQKLSSLVVTKELTFYA 174 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + +++ + + + + N + + Sbjct: 175 DGHYDAKISLSQD---------KRYFIYLGQRPKVNETEQMMTVTGAMVYTDDELVTIVE 225 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + + D+Y A++ + + + D Y Sbjct: 226 DGDAEGRKTFSGVELISAFDQYSATMMYGFPKEANIIIERDRDDNPVLYF---------- 275 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 + T + G KE+ + + P I++GWF F +KP+F L+S+ + + Sbjct: 276 --DATQNMTFNGYVGQKEYKVLKNIN-----PVLTNAIEYGWFTFASKPLFQLLSWLHGI 328 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 GN+G +I+ T+ ++ + +PL K +S MK+I PKI EL+ K+ +S PQ + A++ Sbjct: 329 FGNWGWSIIALTIMIRAVLYPLTYKGMMSMQRMKDISPKIKELQAKY-KSDPQRMNAAVM 387 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +YK HN NPL GC P++LQIPVFFAIY+V+ ++E++ AP+ W+ DL+ D Sbjct: 388 DMYKKHNANPLGGCLPMILQIPVFFAIYRVLLNAVELQGAPWMLWVTDLSRMDDYY---- 443 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 I PI+M SMF Q +++P D Q + ++PV+F F +FP Sbjct: 444 ---------------ILPILMGASMFYQQRLTPNNFTDPMQEKVFKYLPVIFTFFFLTFP 488 Query: 536 AGLIIYWSWSNVISIVQQAVIM 557 +GL++YW +N+ SI QQ ++ Sbjct: 489 SGLVLYWFVNNLFSIGQQFIVN 510 >gi|224437877|ref|ZP_03658824.1| putative inner membrane protein translocase component YidC [Helicobacter cinaedi CCUG 18818] gi|313144326|ref|ZP_07806519.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129357|gb|EFR46974.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 599 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 122/598 (20%), Positives = 244/598 (40%), Gaps = 83/598 (13%) Query: 6 NYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLID--DRA 62 +A+ LS+ + F P+ + T Q + L + D + Sbjct: 15 RVLIAVGLSIAFFAVYAYFVPQKPKTHTSQAQNTQKTTESQAQTAPQTSQPTLENLQDSS 74 Query: 63 QALSMSPRVE---------------LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 A+ + + +++ I+ G + + L+ + Sbjct: 75 PAIESADSISPTTTPQSLKQRIIAHIESDEFEIEIDALG-RIKQVYLKDEKFTRHEQQSL 133 Query: 108 VTLLSP---------------SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 ++ S ++ ++ T + T + Sbjct: 134 FGMIGEVLGFKSQAKAERDKLSLFGDSQLHTMEVRFTDTELNKKAFETPYVASVSHFKLG 193 Query: 153 TTPIKLVFKNA-NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 TP +L +++ ++ +++ + + + + +P Sbjct: 194 NTPYELTLTQNLGDVVLKKILTIHPNLRYDVRVEL------NKPDIEYFVSNGMRPTADP 247 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKS---SISNFHESNSWLGISDKYWASVFIPSKE 268 +T+ + + D L + + SD + +S++ D+Y+ S+F + Sbjct: 248 DTYAFRGVVTRNVNDGVLTKIEDSDATADYLAKQAMDMRESSFVASVDRYYTSLFFTQAQ 307 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + + + +F N + GAK + + +++ Sbjct: 308 KGLYVVVSGDNAHNPMPYVRFVGNA-----------EFSGYIGAKFYKVLQGIDEN---- 352 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 ++++G F AKP+F+L+ Y Y+L GN+G AI+L T+ V+++ +PL + VS Sbjct: 353 -LTGVVEYGRITFFAKPLFLLLEYLYDLCGNWGWAIVLLTLIVRVVLYPLTYRGMVSMQK 411 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 +K++ PK+ EL+ ++K PQ LQ M+ LYK H NP+ GC P++LQIPVFFAIY+V+ Sbjct: 412 LKDLAPKMKELQARYKD-DPQKLQIHMMDLYKKHGANPIGGCLPLILQIPVFFAIYRVLH 470 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 ++E++ + + WI DL+A DP + P++M LSM++ +++ Sbjct: 471 NAVELKSSAWILWIDDLSAIDPYF-------------------VLPVLMGLSMYVSQRLT 511 Query: 509 PPP-ADKGQAMILNWMPVV--FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P D Q I +P V F + FPAGL++YW+ +N+ SI+QQ +I K+ ++ Sbjct: 512 PSNFTDPMQEKIFKMLPWVFTIFFIIFPFPAGLVLYWTVNNIFSIIQQMLINKVMESK 569 >gi|149919109|ref|ZP_01907593.1| 60 kDa inner membrane insertion protein [Plesiocystis pacifica SIR-1] gi|149820039|gb|EDM79460.1| 60 kDa inner membrane insertion protein [Plesiocystis pacifica SIR-1] Length = 580 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 121/591 (20%), Positives = 218/591 (36%), Gaps = 71/591 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER---------------------KN 39 ME +A+ALS++I++ + P + Sbjct: 1 MEMKHRIALAMALSILILFGYTYLVPSPEPTDDALAEQEGGSETGGETGDETGGSDDGAG 60 Query: 40 IQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLK-GAQFDDLNLRG-- 96 +P Q A Q R+ N L +++ + G + + L Sbjct: 61 APEAGEPAQPGQPVEASPAVPDTQIEKSEHRIA--NELLAVTVDSEPGGLINHIELLDDQ 118 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 + ++ L + + L++ A+ + +++ Sbjct: 119 FRNRETNEGEDFLLFDEAAGSD---KTLEFGFLADETDFGWG----RGARAQLVEAGDDR 171 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 + ++ T++L + Y K V N + + +++ Sbjct: 172 VRYVRRKGDVEVVETLTLLDGYEAKYEVLVRNFGKESVAHRVELTTRMGLGSSSSRYDVH 231 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQF 275 SL E + D+E + W G+ KY+ IP +F Sbjct: 232 ---RALCRATDSLEEFTFDDVEDEEDVEKVKGGLHWFGVDSKYFLQAVIP--SETFSGCV 286 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + +IT+ PG+ + L+ GAK + + + + E + Sbjct: 287 VDSDGAGSGMVNTAIGRQITLEPGQQKSYEFGLYLGAKIDSMLGAFPESEGLEAAEGIAL 346 Query: 336 WGWFYF---------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 + + M L+ YFY L G +G+AI++ TV +KL PL KQY S Sbjct: 347 TDAIDWGWFGALSEYLGGMMLALLRYFYGLTGVWGVAIIMLTVVIKLTLLPLTIKQYRSM 406 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 MK I P++ LREK+K ++ + M L+ H +PL+GC P+LLQ P++ A+Y + Sbjct: 407 RKMKEINPEMQALREKYKDDQVKM-NQEMQALFSRHGTSPLSGCTPMLLQFPIWIALYAM 465 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + +++ H + W+ DL DP I PI M MF+Q Sbjct: 466 LGAVVDLYHES-FLWLPDLTQPDPYY-------------------ILPIGMGALMFLQTS 505 Query: 507 MSPPP-ADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 M+P P D+ QA ++ W MP VFV + P+GL +Y + +S++Q + Sbjct: 506 MNPNPGGDEMQAKMMKWMMPGVFVVMMLFLPSGLGVYIFANITLSLIQSFI 556 >gi|322437354|ref|YP_004219566.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX9] gi|321165081|gb|ADW70786.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX9] Length = 607 Score = 234 bits (595), Expect = 5e-59, Method: Composition-based stats. Identities = 128/591 (21%), Positives = 222/591 (37%), Gaps = 66/591 (11%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYAA 55 + N + F +A+ +++ Q + + + + N T V Sbjct: 14 QDNRSLFTIMAIMILVFAGLQFWRAKHNPQTASPNGQTQQQQANQPTPTVAASVAGQTIQ 73 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 V A + S V ++N + + KGAQ L+ Y +V L + Sbjct: 74 VPAVQPVVAAAESTTV-VENELYKITFSNKGAQATSWILKKYKDSYGQPLDLVHTL--AA 130 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 Y L + L N+ + + T K + +T S D Sbjct: 131 QTVGYPLSLYTYDPSLTASLNNALYLPSATGNITAPQTLTFK---YVSGEYQVTKTFSFD 187 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 + Y+ V N P ++ G V + E+ + Sbjct: 188 DTYILHADTQVLRNGS------PIRALVAWPGGFGDQEDAKSYGGSQVDYSQEQKEKHLA 241 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH-----SQFKYLSDGHARYQAKFS 290 + + + + S W G SD Y+A++F+P S S Sbjct: 242 VGKVTGGNTLNGSFDWAGASDLYFAAIFLPDAPDSATVATLDSSIIVPKANRHNGLGHGV 301 Query: 291 ANEITILPGK---------------SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 PGK S T LFAG K + + E L+D Sbjct: 302 PVAPKGEPGKDEIKVPIIGAAVGDLSGHTQTRLFAGPKAVAVLRNVHSAGNKTSLEPLLD 361 Query: 336 WGWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 +G+F I K +F+ + + V N+G I++ TV + LL PL K S M+ IQP Sbjct: 362 FGFFGIIGKYLFLALFAIHQYVTPNWGWCIVILTVLINLLILPLRIKTMQSGLKMQRIQP 421 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++D ++ ++K + ++QL K + +N GC P L+Q+P+ FA + ++ Sbjct: 422 QMDAVKARYKNLKVTDPKRNEMNAEIMQLQKDNGVNMFGGCVPTLIQMPLLFAFFGMLPK 481 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 +E+R A ++ W+ DL++ADP + I PI+M +S F+ +P Sbjct: 482 VVELRQAHWF-WLPDLSSADPYH-------------------ILPILMVISQFLVQFYTP 521 Query: 510 PPA-DKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P D Q ++ +M PV + ++ +GL +YWS N+ISI Q ++ K Sbjct: 522 SPGVDPQQQKMMAFMMPVFSGYMTWNYSSGLALYWSVGNLISIATQFIMNK 572 >gi|116329466|ref|YP_799186.1| preprotein translocase, YidC subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329930|ref|YP_799648.1| preprotein translocase, YidC subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122282297|sp|Q04W30|OXAA_LEPBJ RecName: Full=Inner membrane protein oxaA gi|122282754|sp|Q04XE2|OXAA_LEPBL RecName: Full=Inner membrane protein oxaA gi|116122210|gb|ABJ80253.1| Preprotein translocase, YidC subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123619|gb|ABJ74890.1| Preprotein translocase, YidC subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 622 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 108/627 (17%), Positives = 233/627 (37%), Gaps = 69/627 (11%) Query: 1 MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN-------S 52 ME F+A+ LS+ I F+ P ++ + ++ ++ D S Sbjct: 1 MEDRQSRLFLALILSMGIWMGVNYFFFPPTPKKTSETKEVKVDKPSDDKQDQIQKEKKES 60 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------LDVSSNSP 106 + S S + + S I + G + ++ + + V+ P Sbjct: 61 RTTIPSKGTKIIPSESKKTLVVTESYIVEFSSLGGRISKFYVKDFTGPNGELVQVARKDP 120 Query: 107 IVTLLSPSNTKNAYFAE---LDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 ++ + D+ T + N + + + + F Sbjct: 121 ETLIVDGKTYYGVELSREKGFDFNFTDSLNELPHSEWNRIPFSLAENKADHSVVFSAFSP 180 Query: 163 ANNILFERTI-SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 ++T D FK+ +V N + +++ F+ + + + + F Sbjct: 181 DKTYQLKKTFRFFDRENYFKVTVSVINLTKEKLSFASQKNVQYLRTFGSLGPFPKDRPLN 240 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISD------------------------- 256 ++ W I + Sbjct: 241 DRDTANFFRFYHLDGSFNDTLDGSSSVGFWSSIVNFFTGNSGVDESFSLKTSTGGVDFAG 300 Query: 257 ---KYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 +Y+ +V P + + N IT+ PG+ + G + Sbjct: 301 TGSRYFIAVADPLDHKPQGIILDNRPKNESGAVLVY--NNITLGPGEVYNLDFASYVGIR 358 Query: 314 EFPTIHHYEKDLAIPR------------FEMLIDWGWFYFIAKPMFMLMSYFYNL-VGNF 360 E + ++ +L + + G + ++ Y + N+ Sbjct: 359 ESIGMVFHDPELDPSQTKNSPFAGLSSDLNKSFNQGITTPFRNGIIWVLKQIYRFTIPNY 418 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G +I++ + KL+F+PL +KQ S M+ + P++ + EKF P++ Q+ ++LYK Sbjct: 419 GWSIIIFAILFKLVFYPLNQKQAESMKKMQELSPQLKTINEKFAN-DPKMRQQKTMELYK 477 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 +N+NP+ GC P+++QIP+F A+Y S ++++ ++P + W+KDL+ D + + Sbjct: 478 KNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSP-FLWVKDLSEPD---VIWTSPAI 533 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 P++ + + + ++M + Q +M+ D Q M++ MPV+ ++ + P+G+ + Sbjct: 534 PYFTQTGIGLNLLALLMVGTQIFQTRMTSVSMDPNQKMLMYVMPVMMLYIFWNMPSGVTL 593 Query: 541 YWSWSNVISIVQQAVIM--KMHGAEIG 565 YW++ NV+SI QQ V K A+ Sbjct: 594 YWTFQNVLSIGQQWVTNHLKKTEAKKK 620 >gi|325294818|ref|YP_004281332.1| Membrane protein oxaA [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065266|gb|ADY73273.1| Membrane protein oxaA [Desulfurobacterium thermolithotrophum DSM 11699] Length = 490 Score = 233 bits (594), Expect = 6e-59, Method: Composition-based stats. Identities = 120/561 (21%), Positives = 218/561 (38%), Gaps = 79/561 (14%) Query: 1 MERNWNYFV--AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME+N + A L+ I+V +Q F+ + E + V+ Sbjct: 1 MEKNKLLSIVQAALLAFILVLGFQFFFGKNEERKNVKEALKQEH-------------VVK 47 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D ++ + V++K P I+ + L ++ Y+ + S S Sbjct: 48 VDIPESREIGKVVKVKTPLYSAEISTVNGKLLSLTVKKYNAQLVSE--------FSKKMG 99 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 + + EL N + ++ + +KL + F + ++ Sbjct: 100 IFPLMTISTDEKLSKELANISLTPSMKKVLVKDKAVILKLEGSLQDGRKFVKELTFYPDS 159 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 + I P N ++ + + + Sbjct: 160 Y---------RIDVKTELKGEKLITLIGPDIRVNEAHTSRMGHIGPVVETEKGIERLEPQ 210 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + ++ W G DKY+ + F + I Sbjct: 211 EIKTPISFKNVKWAGEEDKYFLMAI-----KDTDFPVSIENINSHTVIKGFIGSGI---- 261 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 + G KE + + ID+G F F+AKP + + + Sbjct: 262 ---------FYGGPKELNQLESL-------GMDKAIDFGIFGFLAKPFLKFFLFLHQFIP 305 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+G+ I++ T+ +K++ PL K + S M+ + PK++E++ K+K +P Q L + M++L Sbjct: 306 NWGLVIIVLTILIKIILHPLTHKSFESMKKMQELAPKLEEIKNKYKDNP-QKLNEEMMKL 364 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK +NP+ GC PILLQIP+FFA+Y++ ++E++ A + W+ DL+ D T Sbjct: 365 YKEAGVNPMGGCLPILLQIPIFFALYEIFLNAVELKGAS-FLWVPDLSMPDSTF------ 417 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 I PI+M SM +Q K++P + Q I M VVF F +SFPAGL Sbjct: 418 -------------IMPILMGASMILQQKLTPT-TNPQQEKIFMIMAVVFTFMFASFPAGL 463 Query: 539 IIYWSWSNVISIVQQAVIMKM 559 ++YW +N+I+ +Q +I +M Sbjct: 464 VLYWLTNNIITAIQNFIINRM 484 >gi|225848362|ref|YP_002728525.1| 60 kDa inner-membrane protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225643468|gb|ACN98518.1| 60 kDa inner-membrane protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 514 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 126/570 (22%), Positives = 239/570 (41%), Gaps = 69/570 (12%) Query: 2 ERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 + + A+ + ++ Q F+ + E + +K + + ++ Sbjct: 5 DMQKRMLIFFAVVSFLFISFTVISQFFFPENKKESPQSSQKQEINNQNIPIQTSGNFDLI 64 Query: 58 IDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 + + L S +++K G + + + Y+ D+ S+ Sbjct: 65 LTNERVNLDTSKNIKVKTKFGYIEFTPFGGRITSVYVEKYNHDMISD------------- 111 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 F++ + + I + T S ++ N+ E+T ++ + Sbjct: 112 ---FSKKNKIFIGELITSNPNLTRILNFSEYTVSQNNKEITFKLEKENVSIEKTYTIQDD 168 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 + I + + + + D Sbjct: 169 GVISIAVKTKGIENTSVALLSGVSLNSEGSFGHEGAIIK-----------TDKDLIRIDK 217 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 E ++ W G +KY+ +F P T+ + + +L Sbjct: 218 ELKQPQIIRDNILWAGEENKYFLQIFAPKNGTN------------TVNVIPVAKDTTAVL 265 Query: 298 PGKSITTTNFLFAGAKEFPTI---HHYEKDLAIPRFEM--LIDWGWFYFIAKPMFMLMSY 352 S F+++GAK + + Y KDL ++ ID+G+F + KP+F+L+ + Sbjct: 266 VNVSPDFEGFIYSGAKLYSILGQITDYYKDLWKVDLDLRSSIDFGFFGILGKPLFLLLHF 325 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 FY + N+G+AI++ TV +++LFFPL K + M ++ P+I++L++K+ + PQ LQ Sbjct: 326 FYTYIPNWGVAIIILTVLIRILFFPLNHKSLKAMRKMADLAPEIEKLKKKYAK-DPQKLQ 384 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + +++LY NP++GC PIL+QIPVF A+Y V+ +++E+++APF WIKDL+ DP Sbjct: 385 EEIMKLYAEAGANPMSGCLPILVQIPVFIALYNVLMVTVELKNAPFILWIKDLSDKDPYY 444 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS 532 I PI+M LSM Q ++P DK Q MI+ M VF F Sbjct: 445 -------------------ILPILMGLSMIAQQWITPSS-DKNQKMIMYIMAGVFTFMFM 484 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +FPAGL++YW +N++ ++Q ++ K Sbjct: 485 NFPAGLVLYWLTNNILGLLQSFIVNKTMKK 514 >gi|315453617|ref|YP_004073887.1| inner-membrane protein, OxaA [Helicobacter felis ATCC 49179] gi|315132669|emb|CBY83297.1| inner-membrane protein, OxaA [Helicobacter felis ATCC 49179] Length = 552 Score = 233 bits (593), Expect = 7e-59, Method: Composition-based stats. Identities = 127/579 (21%), Positives = 239/579 (41%), Gaps = 68/579 (11%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 E N +AIALS + + + F+ P+ ++ + Q P+ ++ D Sbjct: 3 ENNLRLILAIALSFLFLAIYTYFFQTPQKTQVPS-ISTTQAPSAPSLAQSTPTPQAPLDN 61 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN--- 118 ++ + +PS+ I+ G + + L+ + + + N Sbjct: 62 TPIIA-----HIHSPSIEIEIDALG-RIAQVYLKDKKFTTHKDEGFIDHVKRLMGMNHKP 115 Query: 119 ------------AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NN 165 L+ + + +T + + L + Sbjct: 116 LKPLEKLPLLGEGALKPLELRFVDSTLNQEAFHTPYKTSINDLKLTDDTQTLTLTQELSQ 175 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 ++ ++ ++ + + + + + + +P + + + Sbjct: 176 VVVKKILTFHTNLSYDLKVEILPKTSVNTAYILS---NGSRPVADDDGYAFHGVLLGTQE 232 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 K L + + DI+++ + +++ D+Y+ S F + Sbjct: 233 -KKLEKIEDGDIKEAKS---FKDIAFIASVDRYY------------TSLFFSTTPLATII 276 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 ++ + G K+ + P +I++G F AKP Sbjct: 277 DSQTGTKNPLPFVSLKGNADLHGYIGPKDHRLLEQIS-----PMLTDVIEYGMITFFAKP 331 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F+L+ Y Y N+G AI+L T+ ++++ +PL+ K VS +K++ PK+ EL+EK+ + Sbjct: 332 VFLLLDYLYRYTHNWGWAIILLTLIIRIILYPLSYKGMVSMQKIKDLTPKMKELQEKY-K 390 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 S PQ LQ M+QLYK H NPL GC P+LLQIPVFFAIY+V+ ++E++ A + WI DL Sbjct: 391 SDPQKLQMHMMQLYKKHGANPLGGCLPLLLQIPVFFAIYRVLYNAVELKSAEWIFWIHDL 450 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMP 524 + DP I PI+M +SM+ Q ++P D QA I +P Sbjct: 451 SLMDPYF-------------------ILPILMGISMYAQQVLTPSTITDPTQAKIFKMLP 491 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + F L +FPAGL++YW+ +N+ SI+QQ I +M + Sbjct: 492 LFFTLFLITFPAGLVLYWTINNLFSILQQWGINQMLDRK 530 >gi|163789146|ref|ZP_02183589.1| putative inner membrane protein translocase component YidC [Flavobacteriales bacterium ALC-1] gi|159875559|gb|EDP69620.1| putative inner membrane protein translocase component YidC [Flavobacteriales bacterium ALC-1] Length = 633 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 113/626 (18%), Positives = 236/626 (37%), Gaps = 67/626 (10%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME N + L I+ W + P EE+ ++K + + + + L Sbjct: 1 MEEKKFDINSIIGFVLIFGIML-WYFYQSKPTDEEIAAQKKAQEEQVETEKKVSKQEETL 59 Query: 58 IDDRAQ-----ALSMSPRV---------------------ELKNPSLIGSINLKGAQFDD 91 + AL + +V ++ + KG + Sbjct: 60 VTSAEDYTNVKALDSTEQVALQSKVGSFANALNLPGEDITTVETDVFELKFSRKGGHLAE 119 Query: 92 LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151 + L+ + V +S + L+ +N+ + ++ N+ S Sbjct: 120 VRLKNF---VDYDSVPIYLVKDNNS------AFNISFGTSDNRTLNTQDFPFQPSVTKSG 170 Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 T + + K + + E L + + + S + + Sbjct: 171 ENTVVSMKLKVSESAFLEYRYELKPNDYMIDFSIKSQGLSGEFNTSQPIILDWKQKSIRH 230 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 E L + ++ + + WL +++S+ + Sbjct: 231 AKSISYENRYTRLTYRHDGDKIDKLPQMGDDEETVDDVEWLSYRQHFFSSILASNDGALK 290 Query: 272 HSQFKYLS-----DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + + ++ G ++ L+ G + T+ YEK L Sbjct: 291 NVAMTSKDLVEDEEVDTLFTKLYTTKFPLAYNGGEVSKNFGLYYGPTDAKTLKTYEKGL- 349 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 + WG F +I K +F+ + F + +GIAI++ T+ VK++ + KQ++S Sbjct: 350 --EESIPFGWGIFGWINKAVFIPLFGFLSGFLPYGIAIIVMTILVKIMLSFVQYKQFLSQ 407 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A MK ++P++D +R K K + + Q+ + L +PL+GC P L+QIPVF+A++ Sbjct: 408 AKMKILKPELDAIRAKHKDNKMKA-QQETMALQSKAGASPLSGCLPGLMQIPVFYALFMF 466 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + E+R + W DL++ D ++ L +PFY HV ++PI+ ++++F MK Sbjct: 467 FPTAFELRQKS-FLWADDLSSFD--SVLDLPFNIPFYG---DHVSLFPILAAIAIFFYMK 520 Query: 507 MS---PPPADKGQA------MILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M+ Q ++ +M P++ + +++ +GL +Y+ SN+ISI Sbjct: 521 MTTGQQMATQPTQEGMPDMGKMMKYMIYFSPLLMLVFFNNYASGLSLYYFVSNLISIGIM 580 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYN 579 VI E ++ ++ + +K Sbjct: 581 LVIKNYIIDEEKVLAKIEVSKTKPKK 606 >gi|94967248|ref|YP_589296.1| protein translocase subunit yidC [Candidatus Koribacter versatilis Ellin345] gi|94549298|gb|ABF39222.1| protein translocase subunit yidC [Candidatus Koribacter versatilis Ellin345] Length = 583 Score = 232 bits (590), Expect = 2e-58, Method: Composition-based stats. Identities = 112/603 (18%), Positives = 231/603 (38%), Gaps = 66/603 (10%) Query: 5 WNYFVAIALSVIIVYAWQ--NFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + AL+ I++ Q F P+ ++ N++ + ++ A Sbjct: 15 RKLLLIFALTFIMIVIGQTVFFKNIPKKQDDKNQKSAPVAAQTSQPAASAPAVATPAVAK 74 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 QA + + V ++N +GAQ L+ Y +P+ + + + Y Sbjct: 75 QAQAETETV-VENAVSRIVFTNRGAQVKSWVLKNYKD--DHGNPLELVNREAAKQFGYPL 131 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 +L ++ V + + + + ++ ++T+ Y+ + Sbjct: 132 SFFTYDQGLTTKLNDAMYVASATGRIEVPGELTFEF---SDGDLSAKKTLRFTNGYVVGV 188 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 +VT + Q + IA + Q I + Sbjct: 189 ETSVTRGGSNVTALPAWPSGFGDDVQPTS----YALQAIAYENSGEVERQTGKKIVGGAT 244 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL----------SDGHARYQAKFSAN 292 +W G D+Y+A++F+P + + D + + Sbjct: 245 LR--GPFNWAGAQDQYFAALFLPDNPPAASMVTLHNTLKIPADLDKPDPNKTQPVDVIGS 302 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKD-----LAIPRFEMLIDWGWF-YFIAKPM 346 + L G ++T LF G K + + + P ++D+G + FIAKP+ Sbjct: 303 AVGDLSGPTVT---RLFVGPKALHILESVKSNAAPGQPNGPDLSKVVDFGKYLGFIAKPL 359 Query: 347 FMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK--- 402 F+ + + + + V N+G +I++ TV + L+ PL S M+ IQP++ ++EK Sbjct: 360 FLWLRWTHDHWVPNWGWSIIILTVIINLVLLPLRLSSMKSALKMQKIQPQMKAIQEKYKK 419 Query: 403 --FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 + M LYK H++NP+ GC P+++Q+P A Y ++++++E+R A ++ Sbjct: 420 YKMNDPKRADMNTEMAALYKQHSVNPVGGCLPLVIQMPFLIAFYGMLAVAIELRQANWF- 478 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI 519 W+ DL+ D H+ I P+++ S + +M+P D Q + Sbjct: 479 WLHDLSGPD-------------------HLYIIPVLIVASTILMQRMTPQAGIDPAQQKM 519 Query: 520 LNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 + M P + + +GL +YW N+I QQ ++ + L + + +K Sbjct: 520 MTIMMPAFLGWISLRYASGLGLYWIVGNIIGFAQQFIMN-----KTELGREIAAVRAKQA 574 Query: 579 NSQ 581 N + Sbjct: 575 NKR 577 >gi|152993157|ref|YP_001358878.1| inner membrane protein translocase component YidC [Sulfurovum sp. NBC37-1] gi|151425018|dbj|BAF72521.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 539 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 124/573 (21%), Positives = 242/573 (42%), Gaps = 65/573 (11%) Query: 1 MER---NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME+ N +A+ALS + + + + + + + ++ + Sbjct: 1 MEQQDLNKRLLLALALSFFVFVGYSYLFPPQKQVAQTEQNISNTQTPKAVTTQSTPKSTP 60 Query: 58 ID----DRAQALSMSPRV--ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 ++ A + S +V + + + +I+ G + L + + L Sbjct: 61 VNMDKAQNAPKNTASEKVLATVTSNTFKITIDEFG-RIAQYELLEAKYKDAEGHNLQIL- 118 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 T E+ + N E + + + ++ I ++ + + + + Sbjct: 119 ---GTNEVKPLEVRFSDAKINDEAFKTPYTLDGSASVDVSSNAQILILTQKLSALTVTKK 175 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 I++ + I T +P H+P ++ + + G + D + Sbjct: 176 ITIKPDGSYDIDVT-------TSAPAPYFITPGHRPMADSSRYMLVRGALVEGADGVITT 228 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 D + + ++ D+Y A++ F G K Sbjct: 229 IPDGD---AKGTETFKNAKIASAFDRYVATM------------FYDFKKGMNVSILKVGN 273 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 ++ I + G KE+ + + P I++GWF F++KP F ++ Sbjct: 274 DDPLIFVEGGQNLHLGGYIGPKEYNILKNIN-----PELTNTIEFGWFTFLSKPFFKVLL 328 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + L+GN+G AI+L T+ VKL FPL+ K +S +K++ PK+ +L+ K+K P ++ Sbjct: 329 WIHGLIGNWGWAIILFTLLVKLTLFPLSYKGMMSMQKLKDLAPKMKDLKAKYKGDPAKLN 388 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADP 470 + M++LYK + NP+ GC P++LQIPVFFA+Y+V+ + E++ A + GWI +LA ADP Sbjct: 389 AQ-MMELYKKNGANPMGGCLPMILQIPVFFALYRVLLNADELQGAAWIPGWINNLAVADP 447 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVF-- 527 + P++M +SM+ Q +++P D Q I W PV+ Sbjct: 448 YY-------------------VLPVLMGISMWFQQRITPNNFTDPLQEKIFKWFPVLMAG 488 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +F + FP+GL++YW +N +I QQ VI + + Sbjct: 489 MFIIMPFPSGLVLYWVVNNTFTIGQQYVINRAY 521 >gi|255034943|ref|YP_003085564.1| putative inner membrane protein translocase component YidC [Dyadobacter fermentans DSM 18053] gi|254947699|gb|ACT92399.1| 60 kDa inner membrane insertion protein [Dyadobacter fermentans DSM 18053] Length = 602 Score = 231 bits (588), Expect = 3e-58, Method: Composition-based stats. Identities = 112/591 (18%), Positives = 221/591 (37%), Gaps = 33/591 (5%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N+ + + L ++++ +Q P E K V +P+ V + Sbjct: 1 MD--KNFVIGLVLIMLMLIGYQILVPKPVEPTPVAEVKKE--VSKPSSVTSDTTQNSSQS 56 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + ++ KG ++ L+ Y + + L++ ++ K Sbjct: 57 VDSLAIPQKDLVIETKDARVVFTNKGGVMKEVMLKNYKT---YDQKPLYLIAENHNK--- 110 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 F T + + T + I NN E+T + Sbjct: 111 FQIDLPTQTGDVRLTNQTFTTDAQDRTLAEGDSAVITYRATIKNNQTVEQTYVVRGTGY- 169 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 ++D S + N + V ++ + + Sbjct: 170 -VIDYGIKASGALPANKSVEFHWDNDLLQLENDMKKNREVVTVNYYTDELKSLATSPTSN 228 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF--SANEITILP 298 + W I KY+ + I K + + + K I Sbjct: 229 EEEKTADPVKWFTIKHKYFLAGLIAEKHPLTNVTVRANVNPEDSVIVKNMNVFAGIPTAA 288 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY---FIAKPMFMLMSYFYN 355 + + G E+ + + + F+ + G+ + + L + Sbjct: 289 VQKGEANFQFYLGPNEYHIVDKVKAE----NFDQNVYLGYAFLKPINKFFLVPLFNLIEG 344 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 V N+G+ I+L +FVK L PL K Y+S A M+ + P+++++RE+ K + Q+ Sbjct: 345 FVSNYGLLIILLVLFVKTLLTPLTYKSYISMAKMRILGPELEQIREQNKDDLAK-QQQEQ 403 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LY+ ++PL+GC P+L +P+ F+++ + +E+R + W DL+ D + F Sbjct: 404 MKLYQQVGVSPLSGCVPVLATMPILFSLFFLFPNLIELRQQS-FLWADDLSTYD--SFFK 460 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPPADKGQAMIL-NWMPVVFVFA 530 L +PF + H+ ++ I+M+ S + + +P L MP++F+F Sbjct: 461 LPFEVPFGIGN--HISLFTILMTASSIGYAYYNNQNTPTQPGPVNMKALGYVMPLMFMFI 518 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 L+SFPAGL Y+ SNV++I QQ +I K E + + L KN + Sbjct: 519 LNSFPAGLTFYYFVSNVVTIAQQLLI-KRFVNEDKIKNILEENRKKNATGE 568 >gi|187735748|ref|YP_001877860.1| 60 kDa inner membrane insertion protein [Akkermansia muciniphila ATCC BAA-835] gi|187425800|gb|ACD05079.1| 60 kDa inner membrane insertion protein [Akkermansia muciniphila ATCC BAA-835] Length = 628 Score = 231 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 122/547 (22%), Positives = 236/547 (43%), Gaps = 44/547 (8%) Query: 35 NERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSI---NLKGAQFDD 91 +V + + D + L+ + P + + GSI L D Sbjct: 56 TSAPEQASVNKALEEDKTAPITLVATQEVNGRQEPFITYTFNRIGGSIGTVTLHNDIVDS 115 Query: 92 LNLRGYHLDVSSNSPI---VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK 148 + +++ ++ + + T++ + Y + G Sbjct: 116 QKVADHNITINEAQQRGIGELVFNMDATQDPSYDNTVYKEAKRTADSVTL-------EGY 168 Query: 149 ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208 I + E + YL ++ ++ N S + G Sbjct: 169 DPARQLFISKTYTLHPVKNLEGEVLPGSKYLIRLTVSLLNKSPNVQDLRYMGIFGGSAYP 228 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQ--------KYSDIEKSSISNFHESNSWLGISDKYWA 260 A + D SL ++ +S + + + ++ G+ +Y+A Sbjct: 229 IAKSEPKDTYTHFFYHADGSLEQEVPSYFTGGFFSSAKARVLEGPLQDLTYAGVMSQYYA 288 Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQ---------AKFSANEITILPGKSITTTNFLFAG 311 ++ +P ++ + + + ++ +T+ P + T T ++ G Sbjct: 289 TILLPQDQSRGSTVYATRQEFPLTHEGNTLVPGVTVAMGIPNLTMAPNEIKTLTYDIYTG 348 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 K + +L+ P ++ +GW F++ PM L++ F+ GN+G+AI+ T+ V Sbjct: 349 PKFNAYLRDL--NLSYPAISDIMAYGWLVFLSVPMNWLLNLFHGWFGNWGVAIICMTIVV 406 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 + L +PL KK Y++ M +QP++ +L+EK+ PQ + M++LY+ + INP +GC Sbjct: 407 RALIWPLHKKSYMAMKRMSLVQPEMVKLKEKYPD-DPQKVNMEMMKLYQKYGINPASGCV 465 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 P+L+QIP+FFA Y+V+ S E+R PF W+ DL+ D + LFG + + Sbjct: 466 PMLIQIPIFFAFYRVLQYSAELRGQPFCLWMTDLSLPD--TVGHLFG---------VPIN 514 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 I P+IM+++M IQM+M+P ++ Q +I+N MPV+F +F + L +YW+ N+ISI Sbjct: 515 ILPLIMAVTMIIQMRMTPQAGERSQRIIMNLMPVMFFLFCYNFASALALYWTTQNLISIG 574 Query: 552 QQAVIMK 558 Q A+I + Sbjct: 575 QTALIRR 581 >gi|294056003|ref|YP_003549661.1| membrane protein insertase, YidC/Oxa1 family [Coraliomargarita akajimensis DSM 45221] gi|293615336|gb|ADE55491.1| membrane protein insertase, YidC/Oxa1 family [Coraliomargarita akajimensis DSM 45221] Length = 604 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 123/626 (19%), Positives = 225/626 (35%), Gaps = 88/626 (14%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN--------NERKNIQTVKQPNQVDNSY 53 N F+ I L + + + E+ E +++ T + S Sbjct: 1 MDKKNTFLGI-LFLAAGLGFMFWQSAQVQEQQQQEAYEQAIAEEESLATTPSDVAISASN 59 Query: 54 AAVLIDDRAQAL-----------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 A A L + V L N + + G ++ Sbjct: 60 AGEGAAPVADLLVKEVAQAPVEQVPVVDPAEVKTVVLANDFIEVEFSSLGGAIKEVRFLQ 119 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVST--ANNIELPNSNTVWNLISGKILTPTT 154 + ++ Y + + +++ L + Sbjct: 120 ---------------TKRGGRDDYVFNESGLLPALSLGLDVNGELQELTLNYAIEVQDEY 164 Query: 155 PIKLVFKNANNILFERTISLD------EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208 I N ++ R S+ + YL K TV N S I + + Sbjct: 165 SITFALDAGNGLILRRNYSIRNGEGDFDPYLVKHTTTVANQSEAPIALNNIYLNLGTVRP 224 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYS------------DIEKSSISNFHESNSWLGISD 256 GDK+ K I + W + + Sbjct: 225 IVEKALPNYLNVGFYNGDKAKFTPINKLSGGSGFLGIGASSPKDEIVFDNTRVEWASVKN 284 Query: 257 KYWASVFIPSKETSFHSQFKY-------LSDGHARYQAKFSANEITILPGKSITTTNFLF 309 +++ V + + TI G + + Sbjct: 285 QFFTGVLSSEEVAKELYIYPVEMPKTGDTKPERPGITGSVGYELGTIAAGSAKALDFEYY 344 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 G KEF + + ++ +G+F FI+K + M ++LV N+G++I++ T+ Sbjct: 345 VGPKEFKRLQSLGNYQ-----DKIMQFGFFSFISKLLLSFMYLIHSLVPNWGLSIVIMTI 399 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +K++F+PL K S M IQ + EL+EKFK +P Q +Q+ ++L++ H +NPLAG Sbjct: 400 CIKMIFWPLTAKASKSQKRMAKIQGPMAELKEKFKDNP-QKMQQETLKLFREHRVNPLAG 458 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P+ +Q+P+F ++ ++ + E+R + W+ DL+ D F Sbjct: 459 CLPLFVQMPIFLGLFYMLRTASELRFES-FLWVSDLSQPDTMFHIAGF-----------P 506 Query: 490 VGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 V I P+IM ++MF+QM M P P AD Q I ++P VF+ L +F +GL++YW+ N+ Sbjct: 507 VNILPLIMGVTMFLQMSMMPVSPTADPAQQKIFKFLPFVFLIFLYNFSSGLVLYWTVQNI 566 Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRST 573 ++IVQQ + M + ++ Sbjct: 567 LTIVQQKITNAMPDEPVPATASAKAG 592 >gi|309379512|emb|CBX21878.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 299 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 98/285 (34%), Positives = 147/285 (51%), Gaps = 25/285 (8%) Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 Y A I G T L+AG + I + ++ Sbjct: 28 IDIKRGNDKLYSASVGVPLAAIPAGAKAETAVNLYAGPQTTSVIAGIAD-----KLQLAK 82 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+G ++ A P+F L++ +N++GN+G AI++ T+ VK + +PL Y S A M+ P Sbjct: 83 DYGKVHWFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAP 142 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 K+ ++EK+ Q+AM+QLYK INPL GC P+LLQIPVF +Y + S+E+R Sbjct: 143 KLQAIKEKYGD-DRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELR 201 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 AP+ GWI DL+ +DP I PIIM+ +MF Q ++PPP D Sbjct: 202 QAPWLGWITDLSRSDPYY-------------------ILPIIMAATMFAQTYLNPPPTDP 242 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 QA ++ MP+VF FPAGL++YW +N+++I QQ I + Sbjct: 243 MQAKMMKIMPLVFSVMFFFFPAGLVLYWVVNNLLTIAQQWHINRS 287 >gi|189461403|ref|ZP_03010188.1| hypothetical protein BACCOP_02058 [Bacteroides coprocola DSM 17136] gi|189431932|gb|EDV00917.1| hypothetical protein BACCOP_02058 [Bacteroides coprocola DSM 17136] Length = 617 Score = 230 bits (586), Expect = 5e-58, Method: Composition-based stats. Identities = 104/603 (17%), Positives = 221/603 (36%), Gaps = 39/603 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE------RKNIQTVKQPNQVDNSYA 54 M+ N V AL ++ + + + E + + Q +Q + A Sbjct: 1 MD--KNTLVGFALIGAVIVGFGIYNRPSQKEMARAQHYQDSIQAVAQKQEQMQKAQEIAA 58 Query: 55 AVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 ++ + + +L L+N L + + KG + L+ Y+ + Sbjct: 59 SLPVVPDSTSLFFQASQGSEEFTTLENDVLQLTFSNKGGRVCKAMLKEYN---DQQQQPL 115 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L + A L N + ++ + + T ++L N ++ F Sbjct: 116 VLFDGKD------ASLSLGFEGKNENILSNQMYFQTT--NVTDSTVTMRLNAANGGHLDF 167 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 + + + + V + + + + + ++ + ++ Sbjct: 168 IYKLLPNSYVVDFTVQASGLQNFFSPSVKTMSVDWKQRARQMEKGYTFEQRYTSLTYKPV 227 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 Y K E W+ ++Y++ VF+ K + + + Y Sbjct: 228 DDSFDYLSETKDEKETIPEVLDWVAFKNQYFSCVFMAEKNFENATLESKIEQKGSGYMKN 287 Query: 289 FSANEIT-ILPGKSITTTNFLFAGAKEFPTIHH------YEKDLAIPRFEMLIDWGWFYF 341 ++A T P + + + G F T+ +KD + L Sbjct: 288 YTAEMKTAFDPTGAQPSRFQFYFGPNHFKTLLATNDLSFKDKDQELEDLVYLGWPIIRLI 347 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 L + + + GI I+L T+ VK+L P K ++S+A M+ ++P +D++ Sbjct: 348 NRWFTINLFDWLSSWGLSMGIVILLMTIIVKILVLPTTWKSFISSAKMRALKPYVDKINA 407 Query: 402 KFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 K+ + Q+ + LY + ++P+ GC P+L+Q PVF A++ + ++E+R + Sbjct: 408 KYPKQEDALKKQQETMALYSQYGVSPMGGCLPMLIQTPVFMALFFFVPNAIELRQQS-FL 466 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 W DL+A D ++ L + + ++ + M Q M P Sbjct: 467 WASDLSAYDDLISWSTHIPLLGNHLSLFCLLFSVTTVLNQIIMMKQQDMGNNPQMAAMKW 526 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 ++ MPV+F F + + +GL Y+ S +I I+ IM+ E L+ +L + K Sbjct: 527 MMYIMPVMFFFIFNEYASGLSYYYFISGLIGII-TMWIMRRMTDEKKLLAQLEAN--KKA 583 Query: 579 NSQ 581 S+ Sbjct: 584 PSE 586 >gi|333031174|ref|ZP_08459235.1| Membrane protein oxaA [Bacteroides coprosuis DSM 18011] gi|332741771|gb|EGJ72253.1| Membrane protein oxaA [Bacteroides coprosuis DSM 18011] Length = 622 Score = 230 bits (585), Expect = 5e-58, Method: Composition-based stats. Identities = 90/611 (14%), Positives = 225/611 (36%), Gaps = 47/611 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + L +++ + F+ P E++ ++ ++ + Sbjct: 1 MD--KNTIIGFVLIGLLLVGFN-FFTRPSEEQVAAMKQYNDSITAVQAEQEAQTEKHTAA 57 Query: 61 RA---------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + + L+N + + + KG + L+ Y Sbjct: 58 LSHVAPIKVDSTSLFYNASEGTEQFTTLENDVMKVTFSNKGGRVYSAELKEYKNQGDEKG 117 Query: 106 PIVT-LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 T L+ + +N++ N + + + ++L+ + + Sbjct: 118 ENKTNLVLFKDQENSFNFNFY------NQNEVIQSKDYFFTPVNVSETGLTMRLMADSNS 171 Query: 165 NILFERTISLDEHYLFKIVDTVTNNS--IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 I F ++ + + + + + + + Sbjct: 172 YIDFIYSLDSENKEDYLVNFQIKATGMEGKLAHNDYIDIDWAQRTPQHEQGYVFENRHSR 231 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + + ++ ++ +W+ +++++VFI + + Sbjct: 232 LTYRTFDKDTERLTAAEAVTETPEKNLNWIAFRSQFFSTVFITDQGFKNSKLTSTPEEKG 291 Query: 283 ARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-RFEMLIDWGWF- 339 + Y + A T P T +L+ G + T+ + D + ++D GW Sbjct: 292 SGYIKDYKAEMKTFFDPSGKEATQMYLYLGPNHYKTLKAIDSDKDHKWKLNSVVDLGWPI 351 Query: 340 --YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + +L + G+ +++ T+ VK + +P KK Y+S+A M+ ++P++D Sbjct: 352 VKQINQWFTINIFDWLTHLGMSMGVVLLIMTIIVKAIVYPATKKTYMSSAKMRVLKPQVD 411 Query: 398 ELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 + K+ Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R Sbjct: 412 AINAKYPNQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQE 471 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP------ 510 + W DL+ D F L H+ I+ ++M+++ + K + Sbjct: 472 S-FLWATDLSTYDALIKFPFHIPLLGD-----HLSIFCLLMTVTNILNTKYTMAQQNTGA 525 Query: 511 -PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P ++ MP++F+F L+ +P+GL Y+ S +IS++ + ++ E L+ + Sbjct: 526 QPQMPAMKWMMYLMPIMFLFILNDYPSGLCYYYFLSTLISVM-TMIFLRKTTDEEKLLAK 584 Query: 570 LRSTFSKNYNS 580 L + + Sbjct: 585 LEANKNTEKKK 595 >gi|212693128|ref|ZP_03301256.1| hypothetical protein BACDOR_02635 [Bacteroides dorei DSM 17855] gi|212664233|gb|EEB24805.1| hypothetical protein BACDOR_02635 [Bacteroides dorei DSM 17855] Length = 622 Score = 230 bits (585), Expect = 6e-58, Method: Composition-based stats. Identities = 108/608 (17%), Positives = 233/608 (38%), Gaps = 48/608 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE--RKNIQTVKQPNQVDNSYAAVLI 58 M+ N V AL +V + + + E + + +IQ + Q + AA Sbjct: 1 MD--KNTLVGFALIGAVVIGFSIYNRPSQEEMARAKHYQDSIQAIAQKEAERQAQAATTQ 58 Query: 59 DDRA------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 A + L+N + + KG + L+ Y+ + Sbjct: 59 SQNATLHLDSTSMFYGASQGAEQLTTLENNVVKLTFTNKGGRVCAAILKDYN---GQDGK 115 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 + L ++ +++ N + + + + T ++L N I Sbjct: 116 PLMLFDEKDS------GMNFAFEGKNENILTEDMYFQPT--NVTDSTVTMRLAANNGGYI 167 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 F+ + D + + + + + R + + F ++ + ++ Sbjct: 168 DFDYKLLPDAYMVNFTIRANGMQNFFPPALNTVNINWRQRARQLEKGFSFEQRYTSLTYK 227 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 Y + K + + + W+ +++++SV I ++ S + Y Sbjct: 228 PVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTSTPQQEGSGYM 287 Query: 287 AKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYE------KDLAIPRFEMLIDWGWF 339 ++A+ T P +T + G F T+ + KDL + L Sbjct: 288 KNYTADMTTFFDPTGKQSTNMQFYFGPNHFKTLLNSNDLSLSQKDLELEDLVYLGWPIIR 347 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + L + + G+ ++L T+ VK+L +P K Y+S+A M+ ++P I+E+ Sbjct: 348 WVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSAKMRVLKPYINEI 407 Query: 400 REKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 K+ + Q+ + LY + ++P+ GC P+L+Q+PVF A++ + ++E+R Sbjct: 408 NAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFFVPNAIELRQQS- 466 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W DL+ D +I +P H+ ++ ++ S++ + + D GQ Sbjct: 467 FLWAPDLSTYD--DIINWGTNIPLLGN---HLSLFCLLFSITNILNTMYTMKQQDMGQQQ 521 Query: 519 I------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + + MPV+F+F + + +GL Y+ S +I I+ VI++ E L+ L + Sbjct: 522 MPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGIL-TMVILRKTTDEKKLLAMLEA 580 Query: 573 TFSKNYNS 580 K Sbjct: 581 RKEKKSQK 588 >gi|237725457|ref|ZP_04555938.1| inner membrane protein oxaA [Bacteroides sp. D4] gi|229436144|gb|EEO46221.1| inner membrane protein oxaA [Bacteroides dorei 5_1_36/D4] Length = 622 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 106/608 (17%), Positives = 232/608 (38%), Gaps = 48/608 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE----------EMNNERKNIQTVKQPNQVD 50 M+ N V AL +V + + + E +K + Q Sbjct: 1 MD--KNTLVGFALIGAVVIGFSIYNRPSQEEMARAKHYQDSIQAIAQKEAERQAQATTTQ 58 Query: 51 NSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + A + +D + + L+N + + KG + L+ Y+ + Sbjct: 59 SQNATLHLDSTSMFYGASQGAEQLTTLENNVVKLTFTNKGGRVCAAILKDYN---GQDGK 115 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 + L ++ +++ N + + + + T ++L N I Sbjct: 116 PLMLFDEKDS------GMNFAFEGKNENILTEDMYFQPT--NVTDSTVTMRLAANNGGYI 167 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 F+ + D + + + + + R + + F ++ + ++ Sbjct: 168 DFDYKLLPDAYMVNFTIRANGMQNFFPPALNTVNINWRQRARQLEKGFSFEQRYTSLTYK 227 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 Y + K + + + W+ +++++SV I ++ S + Y Sbjct: 228 PVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTSTPQQEGSGYM 287 Query: 287 AKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYE------KDLAIPRFEMLIDWGWF 339 ++A+ T P +T + G F T+ + KDL + L Sbjct: 288 KNYTADMTTFFDPTGKQSTNMQFYFGPNHFKTLLNSNDLSLSQKDLELEDLVYLGWPIIR 347 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + L + + G+ ++L T+ VK+L +P K Y+S+A M+ ++P I+E+ Sbjct: 348 WVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSAKMRVLKPYINEI 407 Query: 400 REKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 K+ + Q+ + LY + ++P+ GC P+L+Q+PVF A++ + ++E+R Sbjct: 408 NAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFFVPNAIELRQQS- 466 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W DL+ D +I +P H+ ++ ++ S++ + + D GQ Sbjct: 467 FLWAPDLSTYD--DIINWGTNIPLLGN---HLSLFCLLFSITNILNTMYTMKQQDMGQQQ 521 Query: 519 I------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + + MPV+F+F + + +GL Y+ S +I I+ VI++ E L+ L + Sbjct: 522 MPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGIL-TMVILRKTTDEKKLLAMLEA 580 Query: 573 TFSKNYNS 580 K Sbjct: 581 RKEKKSQK 588 >gi|237709873|ref|ZP_04540354.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|265753525|ref|ZP_06088880.1| inner membrane protein oxaA [Bacteroides sp. 3_1_33FAA] gi|229455966|gb|EEO61687.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263235239|gb|EEZ20763.1| inner membrane protein oxaA [Bacteroides sp. 3_1_33FAA] Length = 622 Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats. Identities = 106/608 (17%), Positives = 232/608 (38%), Gaps = 48/608 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE----------EMNNERKNIQTVKQPNQVD 50 M+ N V AL +V + + + E +K + Q Sbjct: 1 MD--KNTLVGFALIGAVVIGFSIYNRPSQEEMAHAKHYQDSIQAIAQKEAERQAQAATTQ 58 Query: 51 NSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + A + +D + + L+N + + KG + L+ Y+ + Sbjct: 59 SQNATLHLDSTSMFYGASQGAEQLTTLENNVVKLTFTNKGGRVCAAILKDYN---GQDGK 115 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 + L ++ +++ N + + + + T ++L N I Sbjct: 116 PLMLFDEKDS------GMNFAFEGKNENILTEDMYFQPT--NVTDSTVTMRLAANNGGYI 167 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 F+ + D + + + + + R + + F ++ + ++ Sbjct: 168 DFDYKLLPDAYMVNFTIRANGMQNFFPPALNTVNINWRQRARQLEKGFSFEQRYTSLTYK 227 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 Y + K + + + W+ +++++SV I ++ S + Y Sbjct: 228 PVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTSTPQQEGSGYM 287 Query: 287 AKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYE------KDLAIPRFEMLIDWGWF 339 ++A+ T P +T + G F T+ + KDL + L Sbjct: 288 KNYTADMTTFFDPTGKQSTNMQFYFGPNHFKTLLNSNDLSLSQKDLELEDLVYLGWPIIR 347 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + L + + G+ ++L T+ VK+L +P K Y+S+A M+ ++P I+E+ Sbjct: 348 WVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSAKMRVLKPYINEI 407 Query: 400 REKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 K+ + Q+ + LY + ++P+ GC P+L+Q+PVF A++ + ++E+R Sbjct: 408 NAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFFVPNAIELRQQS- 466 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W DL+ D +I +P H+ ++ ++ S++ + + D GQ Sbjct: 467 FLWAPDLSTYD--DIINWGTNIPLLGN---HLSLFCLLFSITNILNTMYTMKQQDMGQQQ 521 Query: 519 I------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + + MPV+F+F + + +GL Y+ S +I I+ VI++ E L+ L + Sbjct: 522 MPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGIL-TMVILRKTTDEKKLLAMLEA 580 Query: 573 TFSKNYNS 580 K Sbjct: 581 RKEKKSQK 588 >gi|302336556|ref|YP_003801762.1| membrane protein insertase, YidC/Oxa1 family [Spirochaeta smaragdinae DSM 11293] gi|301633741|gb|ADK79168.1| membrane protein insertase, YidC/Oxa1 family [Spirochaeta smaragdinae DSM 11293] Length = 585 Score = 229 bits (584), Expect = 8e-58, Method: Composition-based stats. Identities = 110/596 (18%), Positives = 222/596 (37%), Gaps = 43/596 (7%) Query: 1 MERNWNYFVAIALSVIIV-YAW---QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ +A+ LS I++ + F+ P E + + + + Sbjct: 1 MD--KRTLLAVILSTIVISVGFMIQNTFFAPPLPESPAVTEQAEASGNTNASDGSVSSND 58 Query: 57 LIDDRAQAL-------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 + A V L + + +GA + L+ + Sbjct: 59 NSQQQPTAPVLQAQGIIPFGDEPGEKMVSLDTKVFKATFSSRGALLTSMKLKEHFE---- 114 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 N + ++ N F +P + + + Sbjct: 115 NGEPLEMIWRGNDAEGAFGISFGGPEREIAHVPFFVRNIDENTLEFYREFAVQTSSGPVP 174 Query: 164 NNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 + + ++ + + + N+ + + PQ + + Sbjct: 175 FTLTKRFRFNPSDYLFEVLVKIENSVNAYPALDEDGYAYTLSFGPQIGPQVEKMDGRYAY 234 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 ++ + K+ + SW + KY+A + +P + G Sbjct: 235 RRYFTYENGKQKNYRMKNGSVSVDNRVSWAAVLGKYFAVIGVPDATDYDLLFTEGSEPGL 294 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP------RFEMLIDW 336 F + + G K + Y E ++D Sbjct: 295 PTTSRLFFSRPPLK--SSVSEDVFRFYMGPKISRVLTQYNDPDKNGFGTRDLHLEEVMDQ 352 Query: 337 GWF-YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 G ++ M L+ +FY+++ N+G+AI+L T+ VK++ FP+ K Y ST+ M+ +QPK Sbjct: 353 GRLLGWLEVIMKKLLVFFYSIIPNWGVAIILLTILVKVVLFPITHKSYESTSKMQMLQPK 412 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + E+++K++ +P ++ + M +LYK +NP+ GC P+LLQ+P+F A+Y + + ++R Sbjct: 413 MKEIQDKYRDNPNKM-NQEMAELYKREKVNPMGGCLPMLLQMPMFIAMYGLFNKYFDLRG 471 Query: 456 APFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--- 511 + F GWI DL++ + F F I + + P+ +M + KM+ P Sbjct: 472 SSFIPGWITDLSSPESVYSFAPFKIPILGWSD---IRLLPMFFVATMILSSKMTQSPSSA 528 Query: 512 --ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + M+ MP+ F F L + P+GL++YW +NV++I QQ I K+ + Sbjct: 529 GSQNSSMKMMTYMMPIFFFFFLYNAPSGLLVYWIVTNVLTIGQQKAISKIQKRKEE 584 >gi|150005858|ref|YP_001300602.1| putative inner membrane protein translocase component YidC [Bacteroides vulgatus ATCC 8482] gi|254881961|ref|ZP_05254671.1| inner membrane protein oxaA [Bacteroides sp. 4_3_47FAA] gi|294775570|ref|ZP_06741080.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides vulgatus PC510] gi|319641034|ref|ZP_07995739.1| inner membrane protein oxaA [Bacteroides sp. 3_1_40A] gi|166975850|sp|A6L5L6|OXAA_BACV8 RecName: Full=Inner membrane protein oxaA gi|149934282|gb|ABR40980.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|254834754|gb|EET15063.1| inner membrane protein oxaA [Bacteroides sp. 4_3_47FAA] gi|294450620|gb|EFG19110.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides vulgatus PC510] gi|317387344|gb|EFV68218.1| inner membrane protein oxaA [Bacteroides sp. 3_1_40A] Length = 621 Score = 229 bits (584), Expect = 8e-58, Method: Composition-based stats. Identities = 106/608 (17%), Positives = 231/608 (37%), Gaps = 48/608 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE----------EMNNERKNIQTVKQPNQVD 50 M+ N V AL +V + + + E +K + + Q Sbjct: 1 MD--KNTLVGFALIGAVVIGFSIYNRPSQEEMARAKHYQDSIQAIAQKEAERLAQAATAQ 58 Query: 51 NSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 + A + +D + L+N + + KG + L+ Y+ + Sbjct: 59 SQNATLHLDSTSMFYGANQGTEQLTTLENNVVKLTFTNKGGRVCAAILKDYN---GQDGK 115 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 + L ++ +++ N + + + + T ++L N I Sbjct: 116 PLMLFDEKDS------GMNFAFEGKNENILTEDMYFQPT--NVTDSTVTMRLAANNGGYI 167 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 F+ + D + + + + + R + + F ++ + ++ Sbjct: 168 DFDYKLLPDAYMVNFTIRANGMQNFFPPALNTVNINWRQRARQLEKGFSFEQRYTSLTYK 227 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 Y + K + + + W+ +++++SV I ++ S + Y Sbjct: 228 PVEKSSDYLNEMKEAKEDVTDRLDWIAFKNQFFSSVLIADQDFDKASLTSTPQQEGSGYM 287 Query: 287 AKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYE------KDLAIPRFEMLIDWGWF 339 ++A+ T P T + G F T+ + KDL + L Sbjct: 288 KNYTADMTTFFDPTGKQPTDMQFYFGPNHFKTLLNSNDLSLSQKDLELEDLVYLGWPIIR 347 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + L + + G+ ++L T+ VK+L +P K Y+S+A M+ ++P I+E+ Sbjct: 348 WVNRWFTINLFDWLSGWGLSMGVVLLLMTIIVKVLVYPATYKSYMSSAKMRVLKPYINEI 407 Query: 400 REKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 K+ + Q+ + LY + ++P+ GC P+L+Q+PVF A++ + ++E+R Sbjct: 408 NAKYPKKEDALKKQQETMALYSKYGVSPMGGCLPMLIQMPVFMALFFFVPNAIELRQQS- 466 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W DL+ D +I +P H+ ++ ++ S++ + + D GQ Sbjct: 467 FLWAPDLSTYD--DIINWGTNIPLLGN---HLSLFCLLFSITNILNTMYTMKQQDMGQQQ 521 Query: 519 I------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + + MPV+F+F + + +GL Y+ S +I I+ VI++ E L+ L + Sbjct: 522 MPGMKLMMYIMPVMFIFIFNGYSSGLNYYYFISGLIGIL-TMVILRKTTDEKKLLAMLEA 580 Query: 573 TFSKNYNS 580 K Sbjct: 581 RKEKKSQK 588 >gi|171911028|ref|ZP_02926498.1| 60 kDa inner membrane insertion protein [Verrucomicrobium spinosum DSM 4136] Length = 618 Score = 229 bits (584), Expect = 9e-58, Method: Composition-based stats. Identities = 117/506 (23%), Positives = 208/506 (41%), Gaps = 38/506 (7%) Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 ++ELKN S I + G + + + N + T + +L Y Sbjct: 75 EEKIELKNASAIYTFTNVGGGIASVVMLDTKDHIRLNQHGKAAIGALGTAAKAYQDLTYH 134 Query: 128 S---TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 T + + L+ + + + S + Sbjct: 135 VVEKTDKRVVFEALSPEQVLVRKEYSFSEGSGSSDHLVELKVTIKNQSSAKLVRDSYYLY 194 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 T +S+ + ++ G LG + Sbjct: 195 TGAASSLRPDEIEAPAFVWNDAGDASSFATGSFRDGAGFLGFG---------GPVVELQK 245 Query: 245 FHESNSWLGISDKYWASVF-----IPSKETSFHSQFKYLSDGHARYQA---------KFS 290 + W G+ +++ ++ IP+K + + +D ++ Sbjct: 246 NFQHLRWGGVMSRFYTTLISTKTDIPAKTWATRFLIDHSNDEFKDHKKALQDYAIHGGVG 305 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR--FEMLIDWGWFYFIAKPMFM 348 I + P S + ++ GAK F + + P + ++ +GWF F+++ + Sbjct: 306 LPTIELEPNASTSVDYRIYIGAKIFHDLKKIDVAEGQPNRQMQYVMFYGWFTFVSRGLVF 365 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ +F++L GN+G+AI+L T+ V+ L +P+ + + M + PKI EL+EK K P Sbjct: 366 LLRWFHDLTGNWGVAIVLLTITVRSLLWPVQARSNATMKRMGLLAPKIKELQEKHKD-DP 424 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q + M+++Y+ + +NPL GC P+L+QIP+FF Y V+ + E+R PF+GWI+DL+ Sbjct: 425 QKVNTEMMRMYREYGVNPLGGCLPLLVQIPIFFGFYSVLRYAAELRGQPFFGWIQDLSLP 484 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWMPVV 526 D L G P + M L+MF+QMK++P P ADK Q I MP + Sbjct: 485 DTVTTLHLLGYHLPLNPLPLL-------MGLTMFLQMKLTPQPASADKTQQRIFMLMPFM 537 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQ 552 F+F SF + L +YW+ N+ SI Q Sbjct: 538 FLFFCYSFASALALYWTVQNIYSIFQ 563 >gi|315187341|gb|EFU21097.1| membrane protein insertase, YidC/Oxa1 family [Spirochaeta thermophila DSM 6578] Length = 573 Score = 229 bits (583), Expect = 9e-58, Method: Composition-based stats. Identities = 121/589 (20%), Positives = 225/589 (38%), Gaps = 43/589 (7%) Query: 1 MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 ME N +A+ LS +++ A Q ++ + + + + Q +S Sbjct: 1 ME--RNVVIAVILSAVVIIASAVINQMLFMSQVPQVPTPVEEEVLSETPTPQATSSQEGS 58 Query: 57 LIDDR---------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + A + V ++P + + +G L L + + Sbjct: 59 SLLSEGLPSGLSVEALLPAEDREVVYRSPLMEVVFSSRGGTVRSLKLLTHR---DGEESV 115 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 + P +NA+ + +L + + + Sbjct: 116 EMVYRPEGGRNAFSLSI------GKGDLLLHVPFQVRRPDERTVEFFQDVRLGGLPPFRV 169 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 +R YLF + + N+ + + G + Sbjct: 170 TKRYRFYPGEYLFDLEVELVNSENSSLPLNFEGVMYTLDTGPQIGPPFAALDRYGEYRKF 229 Query: 228 SL----VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 ++ +W+ IS KY+ + IP + F +++G Sbjct: 230 FYFLNGKRKEVRLDPGKISELEEGDPTWVAISGKYFTLIAIPLLPQ-YDVAFSTVAEG-D 287 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP------RFEMLIDWG 337 IT + G K + Y K E ++D Sbjct: 288 LPLGSTVYLYRPAARSARITDLYRFYVGPKISGELSKYNKKNENSAGLSELHLEKVVDTS 347 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 ++ + + F+ L+ N+G+AI+L T+FVK+L FPL K Y S + M+ + PK++ Sbjct: 348 LLGWLEGILKFFLQIFFRLIPNYGVAIILLTLFVKILLFPLTHKSYESASKMQQLAPKME 407 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+R ++K PQ + + + LY+ +NPL GC P+LLQIP+FFA+Y + S ++R A Sbjct: 408 EVRNRYKD-DPQRMNQELALLYQKEGVNPLGGCLPLLLQIPIFFAMYGLFSSHFDLRGAT 466 Query: 458 FW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 F GWI DL+ + F P L G+ + + P+I+ ++ I K++ + Q Sbjct: 467 FIPGWIDDLSVPESVFHFDT----PLPLLGWTDIRLLPLILVVTQIISTKITQGASSSSQ 522 Query: 517 -AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + + +PVVF+F L + PAGL++YW N+ +I QQ I ++ + Sbjct: 523 NQLFMYVLPVVFLFILYNAPAGLLVYWVAMNIFTIAQQLYINRVMKRKT 571 >gi|91202840|emb|CAJ72479.1| similar to inner membrane protein YidC [Candidatus Kuenenia stuttgartiensis] Length = 563 Score = 229 bits (583), Expect = 9e-58, Method: Composition-based stats. Identities = 127/577 (22%), Positives = 241/577 (41%), Gaps = 47/577 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVY---PRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M+ +A+ + +I+ + + P+ E++ E + + + + + Sbjct: 1 MD--RKSLIALIICGVIMLLYYPIILPLLSPKTEKVTQEELSAEKRRLETKNEIRTVTPA 58 Query: 58 IDDRAQALSM----SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + + L V ++N + GA + L+ + S ++ + L+ Sbjct: 59 LLPSQETLREMDIHEEEVVIENECIRTVWINDGAALKSVKLKDFKSQDSKDT--LELIKD 116 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 ++T+ A A+ T + T L + Sbjct: 117 ADTEYRPLAISYIYQKADFQRQRYRITDRSKGRISFSTSLES--------GLNLIKTVSI 168 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 D Y + + NN+ +I + I G + + ++ Sbjct: 169 PDGKYQVDMEIVLENNTDAEISLA-YDIIASSMITHEGVISTDIAGLVGIDMGNHKIKLV 227 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET----------SFHSQFKYLSDGHA 283 + + N W G ++KY+A+V P+ Sbjct: 228 STAPKGFPAKNESRGIVWAGSTNKYFATVLKPASSEWVASVHLQAFDMQGMPSEEKAEQG 287 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 + I I P S+ F G K+ + Y + +I +GW I+ Sbjct: 288 DFMVSLQTGRIHIAPHTSVRHGYLYFVGPKKEEVLGQYGT------MDAIISYGWLNVIS 341 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 K + ++ +N++ N+GI+I++ T+ +K L FPL +K VS M+ +QP I++L+EK+ Sbjct: 342 KLLLGFLNAVHNVIPNYGISIIVLTIIIKALLFPLTRKSQVSMFRMQQLQPLINQLKEKY 401 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K + Q + + + L+K + +NP++GC P++LQ+PVFFA+++ + +S EMR APF WI Sbjct: 402 KNNK-QKIGQEQVLLFKKYGVNPMSGCLPMILQLPVFFALFRTLQLSFEMRQAPFVFWIN 460 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKG---QAM 518 DL+ D + L +PF + I PIIM+ + F+QMK++P P D Q Sbjct: 461 DLSMPD--TLMYLPFTIPFLGNT---LNILPIIMTGASFVQMKLTPKSPATDPQAQAQQK 515 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++++MP++F F L P+GL +YW+ S + SIV+ Sbjct: 516 MMSFMPIMFAFILYKMPSGLTLYWTTSTIFSIVESLF 552 >gi|149193808|ref|ZP_01870906.1| putative inner membrane protein translocase component YidC [Caminibacter mediatlanticus TB-2] gi|149135761|gb|EDM24239.1| putative inner membrane protein translocase component YidC [Caminibacter mediatlanticus TB-2] Length = 511 Score = 229 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 121/567 (21%), Positives = 237/567 (41%), Gaps = 70/567 (12%) Query: 1 MERN--WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME N +A +S + +A+ F + P+I++ E + Q N+ + L Sbjct: 1 MENNNLRRIILATVISFVFFFAYDYFVLQPQIKQGVKENNITKVTTQENKKVKKERSNLK 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 D +++ + I+ G + L+ + + + + Sbjct: 61 IDVVA--------KIEAKNYEVKIDSLG-RISSFILKQNKFNTEKGQHLELI------PS 105 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA-NNILFERTISLDEH 177 L+ N + NT + I P K++ ++ ++ ++ + Sbjct: 106 KLPKPLEIRFEDNELNKKAFNTKVEVDKKLIKLNNKPQKIIITQNLGKVILKKIVTFYPN 165 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 + + T+ N ++P A + + I + + Sbjct: 166 GRYDVEVTLNKNVN-------YFISPGYRPNVAIDQLTIHGALIKKADGTLDIIKD---- 214 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + + D+Y+ ++F + + Sbjct: 215 -GDATAKTINNAIIVAGFDRYYTTLFFSKNPLNAVV-------------IPDEEKNPVLF 260 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 + + G K + + P ++ +G F A+ +F+L+ + Y + Sbjct: 261 IKDNKDLKLIGYIGPKYVDVLKSID-----PELVDVVQYGVGTFFARNLFLLLDFLYKIS 315 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+GIAI+L + V+++ FPL K VS +K + PK+ E++E++ + PQ LQ M++ Sbjct: 316 HNWGIAIILLVILVRIVLFPLTFKGMVSMYKLKELAPKMKEIQERY-KKDPQKLQMHMMK 374 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK H NPL GC P+LLQIP+F+ IYK++ S+E++ A + WIKDL+ DP Sbjct: 375 LYKEHGANPLGGCLPLLLQIPIFYGIYKLLLYSIELKGA-HFLWIKDLSEMDPYF----- 428 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 I P++M ++M+I K++P D Q I ++PVVF +++FPA Sbjct: 429 --------------ILPVLMGITMYIHQKLTPTNFQDPMQEKIFKFLPVVFTIMMATFPA 474 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 GL++YW+ +N++SI+QQ +I K+ ++ Sbjct: 475 GLVLYWTVNNILSILQQVLINKIMESK 501 >gi|224023372|ref|ZP_03641738.1| hypothetical protein BACCOPRO_00065 [Bacteroides coprophilus DSM 18228] gi|224016594|gb|EEF74606.1| hypothetical protein BACCOPRO_00065 [Bacteroides coprophilus DSM 18228] Length = 617 Score = 229 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 104/598 (17%), Positives = 218/598 (36%), Gaps = 39/598 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V L ++ + Y P EE + +++Q A + Sbjct: 1 MD--KNTLVGFVLIGAVIVGFGI-YNRPSQEEKARAQHYQDSIQQLAIQKEQEALKAQEA 57 Query: 61 RAQAL-------------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + + L+N L + + KG + L+ Y + Sbjct: 58 AEKTIRLDSTSMFYQATQGTEQLTTLENDLLQLTFSNKGGRVKKAMLKEY---MDQQKQP 114 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 + L + A L++ N L + N + +S + ++L N ++ Sbjct: 115 LVLFDGED------ASLNFGFEGKNENLLSENLYFETVSKTDTSV--TMRLNASNGGHLD 166 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 F + L+ + + + + + + + + ++ + ++ Sbjct: 167 FVYKLLLNSYMVDFSIQASGMQNFFSPSTKTVSVDWKQRARQMEKGYTFEQRYTSLTYKP 226 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 Y K E W+ ++Y++ VFI + + + + Y Sbjct: 227 VDDSFDYLSETKDEKETILEVLDWVAFKNQYFSCVFIAEQNFEKATLESKMEQKGSGYMK 286 Query: 288 KFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHH------YEKDLAIPRFEMLIDWGWFY 340 + A+ T P + + + G F T+ +KDL + L Sbjct: 287 NYQADMQTAFDPTGAKPSNFQFYFGPNHFKTLLASNDLSFKDKDLELEDLVYLGWPIIRL 346 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 L + + + G+ I+L T+ VK+L P K ++S+A M+ ++P +D++ Sbjct: 347 INRWFTINLFDWLSSWGLSMGMVILLMTIIVKILVLPTTWKSFISSAKMRALKPYVDKIN 406 Query: 401 EKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 K+ + Q+ + LY + ++P+ GC P+LLQ PVF A++ + ++E+R + Sbjct: 407 AKYPKQEDALKKQQETMALYSQYGVSPMGGCLPMLLQTPVFMALFFFVPNAIELRQQS-F 465 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 W DL++ D ++ L + +I + M Q M P Sbjct: 466 LWASDLSSYDDLISWSTSIPLLGNHLSLFCLLFSATTVINQIVMMKQQDMGNNPQMAAMK 525 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 ++ MP++F F + + +GL Y+ S +I I+ IM+ E L+ +L + Sbjct: 526 WMMYIMPLMFFFIFNEYASGLSYYYFISGLIGIL-TMWIMRRMTDEKKLLAQLEANKK 582 >gi|24212878|ref|NP_710359.1| preprotein translocase subunit YidC [Leptospira interrogans serovar Lai str. 56601] gi|38502900|sp|P97041|OXAA_LEPIN RecName: Full=Inner membrane protein oxaA gi|24193541|gb|AAN47377.1| preprotein translocase subunit YidC [Leptospira interrogans serovar Lai str. 56601] Length = 627 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 104/621 (16%), Positives = 222/621 (35%), Gaps = 71/621 (11%) Query: 1 MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA--VL 57 ME F+A+ LS+ I F+ + N E K Q+ K + Sbjct: 1 MEDRQTRLFLALILSMGIWMGVNYFFFPNTSTKKNTETKQTQSDKTSENTKQQITSGKTK 60 Query: 58 IDDRAQALSMSPRVE--------LKNPSLIGSINLKGAQFDDLNLRGYH----------- 98 + A + ++ + S I + G + ++ + Sbjct: 61 ESNSADPVVQKEKITPFDTKKSFIVTDSYIVEFSSLGGKISKFYMKDFTGPNGELIQVAR 120 Query: 99 -----LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELP---------NSNTVWNL 144 + V S LS + F++ + + N + ++ Sbjct: 121 KNPETVVVDGKSYQAVELSRDKGFDFNFSDSLVEISDSPWNYIQFSLTEDKINHSISFSA 180 Query: 145 ISGKILTPTTPIKLVFKNANNILFERTI-SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM 203 +S + + N +I + + L P + Sbjct: 181 VSPDRSYQLKKEFRFYPSENYFKLSISIINFSKEKLSFASQKNVRYLRTFGSLGPYPKDR 240 Query: 204 RHKPQTATNTFGVQEGFIAVLGDKS--------------LVEQKYSDIEKSSISNFHESN 249 + N F + +D S ++ Sbjct: 241 PLSDRDTANFFRFYYLGGSFQDTLDGSSSVGFWSSVGNFFTGNSGTDESFSIKTDKESGV 300 Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 + G +Y+ +V P + + + I + PG++ + Sbjct: 301 DFAGTGSRYFIAVADPLDHKPHGIVLDNRPKNESGAVLVY--DNILLNPGENYNLDFASY 358 Query: 310 AGAKEFPTIHHYEKDLAIPR------------FEMLIDWGWFYFIAKPMFMLMSYFYNL- 356 G +E + +L + + G + ++ Y Sbjct: 359 IGIRESEGMAFKNPELDPSQSKNSPFVGLSSDLNKSFNQGITTPFRNGIIWILKQIYRFT 418 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + N+G +I++ + KL+F+PL +KQ S M+ + P++ + EKF P++ Q+ + Sbjct: 419 IPNYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFAN-DPKMRQQKTM 477 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK +N+NP+ GC P+++QIP+F A+Y S ++++ ++P + W+KDL+ D + Sbjct: 478 ELYKKNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSP-FLWVKDLSEPD---VIWT 533 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 +P++ + + + ++M + Q +M+ D Q M++ MPV+ ++ + P+ Sbjct: 534 SPAIPYFTQTGIGLNLLALLMVGTQVFQTRMTSVSMDPNQKMLMYVMPVMMLYIFWNMPS 593 Query: 537 GLIIYWSWSNVISIVQQAVIM 557 G+ +YW++ NV+SI QQ + Sbjct: 594 GVTLYWTFQNVLSIGQQWITN 614 >gi|45656063|ref|YP_000149.1| hypothetical protein LIC10157 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|73921529|sp|Q72VY8|OXAA_LEPIC RecName: Full=Inner membrane protein oxaA gi|1902825|dbj|BAA19448.1| ORF2 [Leptospira interrogans] gi|2780768|dbj|BAA24371.1| ORF2; putative [Leptospira interrogans] gi|45599296|gb|AAS68786.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 627 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 103/621 (16%), Positives = 221/621 (35%), Gaps = 71/621 (11%) Query: 1 MER-NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA--VL 57 ME F+A+ LS+ I F+ + N E K Q+ K + Sbjct: 1 MEDRQTRLFLALILSMGIWMGVNYFFFPNTSTKKNTETKQTQSDKTSENTKQQITSGKTK 60 Query: 58 IDDRAQALSMSPRVE--------LKNPSLIGSINLKGAQFDDLNLRGYH----------- 98 + A + ++ + S I + G + ++ + Sbjct: 61 ESNSADPVVQKEKITPFDTKKSFIVTDSYIVEFSSLGGKISKFYMKDFTGPNGELIQVAR 120 Query: 99 -----LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELP---------NSNTVWNL 144 + V S LS + F++ + + N + ++ Sbjct: 121 KNPETVVVDGKSYQAVELSRDKGFDFNFSDSLVEISDSPWNYIQFSLTEDKINHSISFSA 180 Query: 145 ISGKILTPTTPIKLVFKNANNILFERTI-SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM 203 +S + + N +I + + L P + Sbjct: 181 VSPDRSYQLKKEFRFYPSENYFKLSISIINFSKEKLSFASQKNVRYLRTFGSLGPYPKDR 240 Query: 204 RHKPQTATNTFGVQEGFIAVLGDKS--------------LVEQKYSDIEKSSISNFHESN 249 + N F + +D S ++ Sbjct: 241 PLSDRDTANFFRFYYLGGSFQDTLDGSSSVGFWSSVGNFFTGNSGTDESFSIKTDKESGV 300 Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 + G +Y+ +V P + + + I + PG++ + Sbjct: 301 DFAGTGSRYFIAVADPLDHKPHGIVLDNRPKNESGAVLVY--DNILLNPGENYNLDFASY 358 Query: 310 AGAKEFPTIHHYEKDLAIPR------------FEMLIDWGWFYFIAKPMFMLMSYFYNL- 356 G +E + + + + G + ++ Y Sbjct: 359 IGIRESEGMAFKNPEFDPSQSKNSPFVGLSSDLNKSFNQGITTPFRNGIIWILKQIYRFT 418 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + N+G +I++ + KL+F+PL +KQ S M+ + P++ + EKF P++ Q+ + Sbjct: 419 IPNYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFAN-DPKMRQQKTM 477 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK +N+NP+ GC P+++QIP+F A+Y S ++++ ++P + W+KDL+ D + Sbjct: 478 ELYKKNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSP-FLWVKDLSEPD---VIWT 533 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 +P++ + + + ++M + Q +M+ D Q M++ MPV+ ++ + P+ Sbjct: 534 SPAIPYFTQTGIGLNLLALLMVGTQVFQTRMTSVSMDPNQKMLMYVMPVMMLYIFWNMPS 593 Query: 537 GLIIYWSWSNVISIVQQAVIM 557 G+ +YW++ NV+SI QQ + Sbjct: 594 GVTLYWTFQNVLSIGQQWITN 614 >gi|182413290|ref|YP_001818356.1| 60 kDa inner membrane insertion protein [Opitutus terrae PB90-1] gi|177840504|gb|ACB74756.1| 60 kDa inner membrane insertion protein [Opitutus terrae PB90-1] Length = 604 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 103/565 (18%), Positives = 211/565 (37%), Gaps = 51/565 (9%) Query: 28 PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL-----SMSPRVELKNPSLIGSI 82 ++ + N + + + A A + V L+N + + Sbjct: 33 QPTPTISTPQTAATGTAPANALPTGTPSAPVPSTAFASVAENDGSATTVTLQNDFIAAHV 92 Query: 83 NLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVW 142 G D+ L+ Y + P V + + A +D+ + Sbjct: 93 TDFGGALHDVALKKYPAERDRPEPFV---FNALHADPMLALVDFPGLDRQTRFELVSHTP 149 Query: 143 NLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIR-FSPRGR 201 + + + + + Y+ + T N S + Sbjct: 150 TSAVYRAVLNGQVEVTRH----YSVLQAGDKSGDPYVVRHETTFRNLSDQTVTLPRVALS 205 Query: 202 IMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD----------IEKSSISNFHESNSW 251 + P A + + D++ + + E +W Sbjct: 206 LGTAAPTDANDPGIRLTTGYSNGDDQNFFARSKLEGGNGFFGIGASEPKPQILTGGPIAW 265 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYL--------SDGHARYQAKFSANEITILPGKSIT 303 +S++++AS+ P + S + + + + + Sbjct: 266 ACVSNQFFASILTPDQPGSGLITRRVKLLPMLPDENRNAYGITSAAQFDLTPLAANAETK 325 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV----GN 359 + G KE+ + + D+ + ++ +G+F F ++ + LM++ + Sbjct: 326 LGADFYVGPKEYRRLANG--DVFKKDQDKVMQFGFFKFFSQILLTLMTWVHGWFPSAAWA 383 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G A+++TT+ +K++F P S M IQP++ +REKFK +P Q LQ A ++L+ Sbjct: 384 WGWAVVITTLILKIIFVPFTLAASRSAKRMAKIQPEMQAVREKFKDNP-QKLQAATMELF 442 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K H +NP+ GC+PIL+ IP F ++++ + E+R P + W DL+A D F Sbjct: 443 KKHKVNPMGGCFPILITIPFFIGFFQMLQSAAELRFQP-FLWAYDLSAPDTVLHIGPF-- 499 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGL 538 + I P++M ++ IQM+++P PA D Q ++ +MP + +F L Sbjct: 500 ---------PLNIMPLLMGATIVIQMRLTPSPAVDNMQVKMMKFMPYIMTMFCYTFSCAL 550 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAE 563 +Y + + + +I QQ VI +M Sbjct: 551 ALYSTVNGIFTIGQQLVINRMKDNP 575 >gi|319789453|ref|YP_004151086.1| membrane protein insertase, YidC/Oxa1 family [Thermovibrio ammonificans HB-1] gi|317113955|gb|ADU96445.1| membrane protein insertase, YidC/Oxa1 family [Thermovibrio ammonificans HB-1] Length = 490 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 124/568 (21%), Positives = 234/568 (41%), Gaps = 84/568 (14%) Query: 1 MERNW--NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME ++ L+++IV +Q F+ ++ + + +T + Sbjct: 1 MEEGKFGTLIQSLILALLIVIGFQFFFHRGEEKKELQKPTSAKTYS-------------L 47 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP-SNTK 117 D + + V ++ P + + L ++ Y+ L+SP S Sbjct: 48 QDVPSSKRLGELVTVETPLYTAQFSTVNGKLVKLTVKKYNA---------QLVSPISKEL 98 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y + + L + NT + K+ + K + +F++ + Sbjct: 99 GVYPLTTVAANPELSKVLVDLNTTPSAKELKVTKAPAKLTFTGKLPDGRVFKKVFTFYP- 157 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 N+ + +G ++ + +G ++K + Sbjct: 158 ----------NSYRIDFKAQLKGARLQTIVGPDIKVNEAHTSRMGHIGPVIETQEKVIRL 207 Query: 238 EKSSISNFHESNS--WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 + I F N+ W G DKY+ K+T F + + + + + Sbjct: 208 KPEEIKGFMSFNNVLWAGEEDKYFLMAV---KDTDFTATVEKVGPKDTLVRNFVGSGIF- 263 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G KE + + ID+G F F+AKP+ + + Sbjct: 264 -------------YGGPKELHQLEPL-------GMDSAIDFGIFGFLAKPLLKFFLFLHK 303 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 V N+G+ I+L + +K+L PLA K YVS M+ + PK++EL++++ PQ LQ+ Sbjct: 304 FVPNWGLDIILFVLIIKILLHPLAHKSYVSMKKMQELAPKLEELKKRYGN-DPQKLQEET 362 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LY+ +NP +GC P+LLQIP+FFA+Y++ ++E++ A + WI DL+ D T Sbjct: 363 MKLYQEMGVNPASGCLPMLLQIPIFFALYEIFLNAVELKGAS-FLWIPDLSQPDHTY--- 418 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 I P++M LSM +Q ++P +K Q I M V+F ++FP Sbjct: 419 ----------------ILPVLMGLSMIVQQLLTPT-TNKQQQKIFILMAVIFTVMFATFP 461 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 AGL++YW +NVI+ +Q +I+K+ + Sbjct: 462 AGLVLYWFTNNVITAIQNFIILKILEKK 489 >gi|297171723|gb|ADI22715.1| preprotein translocase subunit YidC [uncultured verrucomicrobium HF0500_27H16] Length = 653 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 129/664 (19%), Positives = 249/664 (37%), Gaps = 97/664 (14%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ---TVKQPNQVDNSYAAVL 57 M++N + L+ Q + E + + ++ + Sbjct: 1 MDKNK-LLGILFLAAAFWLMTQMPKPGNKYTAPGPEATSTTGGMSATGSATINQPKPSAP 59 Query: 58 IDDRAQALSMSPRVELKN------PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-- 109 +A RV + + G ++ P + Sbjct: 60 TTQSPKAQPAVERVPETTYQLGVEGQFVATFTSHGGAIKEVRFLSKEDRFRKFDPTIRAK 119 Query: 110 -----------LLSPSNTKNA-------------YFAELDYVSTANNIELPNSNTVWNLI 145 LL+ + +N L +++ A + L Sbjct: 120 LNLEEVRALLKLLNEAAAENDTNTTGKLEKQARKLKVPLQWIAAAKTQPKGAFDENAMLQ 179 Query: 146 SGKIL----------------------------TPTTPIKLVFKNANNILFERTISLDEH 177 S I ++ + I+ R Sbjct: 180 SDNNYILNEGQKRPILELLFHGVDSDLVFQKTDETENSITFRAQHGDLIITRRYELAKGT 239 Query: 178 YLFKIVDTVTNNSIDQIR-FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV------ 230 + + T+ N I +I S + T ++T + G + Sbjct: 240 FKIRHTTTLQNTGIQKIDLGSQVFYGLGTSLPTVSDTRKEFQNVGYFSGQRGWTGRRKPP 299 Query: 231 --EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHS--------QFKYLSD 280 + + + S+ W+ + ++++A P K T+ + + Sbjct: 300 IFKLQKMQKQGGSMMENAGGIHWVAVRNQFFAVSLAPDKPTTGVVKGKVFDLGTLDHRGE 359 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 +F N + PG+S+T L+AG KE + + K + ++++ +G+F Sbjct: 360 SEYGVHGQFGLNTDMLTPGQSLTHEFNLYAGPKELKRLSNLSKA-GMKHQDLVMQFGFFG 418 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 +K + MLM + V N+G AI++ T+ +KLLF+PL K S M+ IQP + E++ Sbjct: 419 LFSKLLLMLMQMLHGFVHNWGWAIIIMTILIKLLFWPLTAKSASSMKRMQTIQPLMKEIQ 478 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 K+K PQ +Q+ + +L++ + +NP AGC PIL+Q+P+F ++ ++ + E+R A + Sbjct: 479 AKYKD-KPQKMQQEVAKLFRENKVNPAAGCLPILIQMPIFLGLFFMLRSAAELRFA-EFF 536 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-----ADKG 515 W+ DL+ + +F +P F + PI+M ++MF QM+M+P P K Sbjct: 537 WVSDLSQPE--RMFHWGVQIPILGEYF---NLLPILMGITMFYQMRMTPIPPGADDMQKM 591 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 QA + ++P +F+F L F +GL++YW+ N++SIVQQ + K E + L + Sbjct: 592 QAKMFRFLPFIFLFMLYGFSSGLVLYWTVQNILSIVQQTITNKRKDTEPVV---LPGSSK 648 Query: 576 KNYN 579 K Sbjct: 649 KKNK 652 >gi|223937849|ref|ZP_03629749.1| 60 kDa inner membrane insertion protein [bacterium Ellin514] gi|223893455|gb|EEF59916.1| 60 kDa inner membrane insertion protein [bacterium Ellin514] Length = 604 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 104/601 (17%), Positives = 224/601 (37%), Gaps = 67/601 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYV---YPRIEEMNNERKNIQTVKQPNQVD------- 50 M+ + + +++ W P+ + + + + Sbjct: 1 MD--RKSISILIVCGALLFLWPVLVNKILPPKPAPPHTNLVSSASSTNQTALGTNQAAIA 58 Query: 51 ------NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + V + + N + + + +G ++ L Y VS+ Sbjct: 59 PAQPAFEAGTNVASQFAVNTNQPEETLVVTNDNAVYTFTSRGGGLKEVELLHYPETVSAL 118 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 + T N A N+ + + + G + N Sbjct: 119 RRRAQRTNQFATLNTPAAPPVLSILGNDSLTGDGVFKLSQVPGGVHAEK-------VLTN 171 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV- 223 + + L +YL + N S ++ SP+ ++ G G + Sbjct: 172 GLKVVKEFRLGTNYLMSASVRMENQSRQPLQLSPQEVVLGTATPLGIQDNGQVVGMLWYN 231 Query: 224 -----------LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASV---------- 262 + + ++ W+ + ++++ Sbjct: 232 SNKVASVGPSFFNTNTTKLFFFPRTPETEYRAGSNDVVWVALKNQFFTLATMPQIPAPSV 291 Query: 263 -----FIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317 ++P S A T+ PG + +F G KE+ T Sbjct: 292 VAHLTYLPPPSREEVSSTPKAVAQPTGVTAALEYPGQTLAPGGFVERNYDIFTGPKEYKT 351 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFF 376 + + ++++G F I+K + + M++ ++ L ++G+ I+L TV +K++F+ Sbjct: 352 LARIAARFN-NDIDKVMEFGLFSPISKMLLLGMNWLHHRLSVSYGLTIILITVLIKIVFW 410 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 PL S M+ +QP+I ++EK+K PQ + + ++ Y+ + +NPL GC P LLQ Sbjct: 411 PLTAFSTKSMKRMQALQPQIKAIQEKYKD-EPQKVSQKTMEFYRKNKVNPLGGCLPALLQ 469 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 IPVFF + ++ ++E+R A + W+ DL+ D I F + P++ Sbjct: 470 IPVFFGFFAMMRGAIELRGA-HFLWMGDLSQPDTIFIIPGFNFP---------INPMPLL 519 Query: 497 MSLSMFIQMKMSPPP--ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 M ++M Q+ ++PP D Q ++ +MP++ + + S P+GL +Y++ N+++I+Q Sbjct: 520 MGVTMLWQISLAPPSPGMDPAQQKMMKFMPLMILLFVYSQPSGLALYYTVQNLLTILQTK 579 Query: 555 V 555 + Sbjct: 580 L 580 >gi|99034074|ref|ZP_01314196.1| hypothetical protein Wendoof_01001014 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 341 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 137/344 (39%), Positives = 212/344 (61%), Gaps = 8/344 (2%) Query: 214 FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFH 272 + + + D L E Y DI K + S +W G +DKYW + IP K + Sbjct: 1 YWISHEGVLGAFDNKLEEWTYKDISKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKIN 60 Query: 273 SQFKYLS-DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 K+ + + ++Q F +ILPG S++ N+ FAGAK+ + Y+ L IP F+ Sbjct: 61 VSIKHTNVNNTDKFQVDFVKPYKSILPGASVSNVNYFFAGAKKLNLLDSYKDTLNIPLFD 120 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +D+G YFI KP+F+L+ YF ++ NFG+AI+L T+ +KLL L + Y+S +K+ Sbjct: 121 KAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLSLFNRSYISMFKVKS 180 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ ++E +K + K I L+K +N+NP++ +P+L+QIPVFFA+YKV+ +++ Sbjct: 181 LQPELTRIKELYKNDSLK-QHKETIALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTI 239 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS--- 508 EMRHAPF+ WIKDL+A DPTNIFTLFG+ + P + +GI PII +M IQ K+S Sbjct: 240 EMRHAPFFLWIKDLSAPDPTNIFTLFGLFNYNFP--ISIGILPIIFGATMIIQQKLSEKD 297 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 D Q ++ ++P + VF SSFPAGL+IYW +SN+I+++Q Sbjct: 298 QTSKDDIQVNVMKFLPYISVFIFSSFPAGLVIYWIFSNIITLIQ 341 >gi|42525232|ref|NP_970612.1| 60 KD inner-membrane protein [Bdellovibrio bacteriovorus HD100] gi|39577443|emb|CAE81266.1| 60 KD inner-membrane protein [Bdellovibrio bacteriovorus HD100] Length = 539 Score = 228 bits (580), Expect = 3e-57, Method: Composition-based stats. Identities = 118/578 (20%), Positives = 217/578 (37%), Gaps = 59/578 (10%) Query: 2 ERNWN---------YFVAIALSVIIVYAWQNF-------YVYPRIEEMNNERKNIQTVKQ 45 + N +A+A I+ Y W + Y P+ + + + Sbjct: 1 MQQKNNNPSFFDPKTLIAVAAVAIVYYGWNTYLGKKYPDYNKPKTQTEQSSKPATAATTS 60 Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + + + + + +N + + G + Y Sbjct: 61 ETPAATANTVDTKSEIMETPTTAKEFHFENDKVSFVMTSFGMGLKGYTINNY---QDKEK 117 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 + L SNT + S ++ + + ++ +L F + + Sbjct: 118 NNIKL-GVSNTDGLFEMRWAGDSKPLTFDVAEQAPGHYVGTAQVGETVIKRELKFNSETS 176 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 + FK ++ S ++ + F Sbjct: 177 SFTNTISVTNPTEDFKKGFSLLIPESIHTHASTSFLFPSYE----------HQDFFVTHN 226 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + + S + +S +Y+A+ + E + + Sbjct: 227 GGKHDTVNF-SGATEDVVKDFPATSLVSVSSQYFAAAILDKSEIMPEVKLNAQINAKTAM 285 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 +T + +AG K + + P LID+G+F FIA+P Sbjct: 286 AELVYKPASVKP---EMTFSEVFYAGPKSIDALKAVD-----PEMASLIDFGFFGFIARP 337 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + +M +++VGN+G AI++ T+ V+L P + S M+ +QP I LREK+ + Sbjct: 338 LLYVMKAAHSVVGNWGFAIIILTLLVRLCVLPFNIMSFKSMKAMQKVQPIIQGLREKY-K 396 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 P L + M+ + K + NPL GC P+LLQIPVFFA+Y+VI S+E+ ++PF WI DL Sbjct: 397 EDPMRLNQEMMAVMKQNGANPLGGCLPMLLQIPVFFALYRVIGSSIELYNSPFILWITDL 456 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 ++ D + P+ M++ M+IQ K++P D QA I+ ++PV Sbjct: 457 SSHDKFY-------------------VLPVSMAVFMYIQQKITPSTMDPTQAKIMAFLPV 497 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 VF + PAGL +Y S + I+QQ +IM+ + Sbjct: 498 VFSLFMLQLPAGLTLYMVVSTLFGIIQQWLIMREPKTK 535 >gi|298208263|ref|YP_003716442.1| putative inner membrane protein translocase component YidC [Croceibacter atlanticus HTCC2559] gi|83848184|gb|EAP86054.1| putative inner membrane protein translocase component YidC [Croceibacter atlanticus HTCC2559] Length = 622 Score = 228 bits (580), Expect = 3e-57, Method: Composition-based stats. Identities = 117/624 (18%), Positives = 241/624 (38%), Gaps = 70/624 (11%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME N + L I+ W + P EE+ E+ + V++ N+ + Sbjct: 1 MENKKFDLNSLIGFILIGGILI-WMLYRNAPTEEEL-QEKATTEQVEKANETNEVATPTT 58 Query: 58 IDDRAQALSMSPRV------------------------ELKNPSLIGSINLKGAQFDDLN 93 +D A + + + +N L + KG Q + Sbjct: 59 VDSTQVATTETDSIKQARANAQLGSFGYSNQYDNGTVTTFENDVLFLKVANKGGQIVEAK 118 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 ++ + +S V L+ +N + T N L T+ + Sbjct: 119 MKNFKT---YDSIPVHLIKDNNASFNINFKTSDNRTLNTENLAFEPTLSKSGDNQ----V 171 Query: 154 TPIKLVFKNANNILFERTISLDEHY-LFKIVDTV-TNNSIDQIRFSPRGRIMRHKPQTAT 211 +KL N+ + + + E+ F I N ++ ++ + Sbjct: 172 LSMKLKVSNSEYLEYRYELKPGEYMLDFSINSKGLENVLNTSEAAVLNWKLKGYRHAKSI 231 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + I D D + ++ ++ S+ + Sbjct: 232 SYENRYTEAIYEYEDGKDDYLGQQDFTDDEEEDVT----YVAFKQHFFTSILLTDTPFKT 287 Query: 272 HSQFKYL----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 D Y +F+A G I + G ++ ++ Y+++ Sbjct: 288 GKFTSKNLVEDEDIDTVYTKEFTAQFPLETKGGEIDYNMNWYYGPSDYKILNDYDRN--- 344 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNL----VGNFGIAIMLTTVFVKLLFFPLAKKQY 383 + +I GW F ++ + +F + V ++G+AI++ T+ V+++ P+ K Y Sbjct: 345 --LDEVIPLGWGIFGWINRYVFIPFFAFITSFGVVSYGVAIIIMTIVVRIVLSPVTYKSY 402 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +S A MK ++P+I+EL EK+K +P + Q+ ++LY +P++GC P L+Q+PVF+A+ Sbjct: 403 LSQAKMKVLKPEINELNEKYKDNPMKK-QQETMKLYSKAGASPMSGCLPALMQLPVFYAL 461 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 ++ + ++R + W DL++ D I L +PFY HV ++PI+ S+++F Sbjct: 462 FQFFPSAFQLRQKS-FLWADDLSSYD--TIAELPFSIPFYG---DHVSLFPILASVAIFF 515 Query: 504 --------QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 M+ + P I+ P++ +F +++ +GL +Y+ SN+I+I V Sbjct: 516 YMTMTTGQTMQQNSQPGMPNMKFIMYLSPLLMLFFFNNYASGLSLYYFISNLITIGIMLV 575 Query: 556 IMKMHGAEIGLIDRLRSTFSKNYN 579 I + E + ++ + K Sbjct: 576 IKNVIIDEDKIHAKIEANKKKPKK 599 >gi|225012688|ref|ZP_03703123.1| 60 kDa inner membrane insertion protein [Flavobacteria bacterium MS024-2A] gi|225003221|gb|EEG41196.1| 60 kDa inner membrane insertion protein [Flavobacteria bacterium MS024-2A] Length = 608 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 113/604 (18%), Positives = 231/604 (38%), Gaps = 45/604 (7%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ--TVKQPNQVDNSYAA 55 ME F+ L ++ W + P E + + TV+ +V + Sbjct: 1 MEEKKFDPYQFIGFILI-AVILTWMLYRNGPAEEASTAKATTEEGATVQSTPEVVQVSDS 59 Query: 56 VLIDDRAQA---------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 +L + +A + V++ + + KG Q L + + Sbjct: 60 ILQQQKVEAFGDLGTLFVPKPTENVKITTDNFSVEVQSKGGQIVLFQLDEFENYEDA--- 116 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 + L+ SNT + + V T + L N+ ++ + + + + + Sbjct: 117 PIRLIDESNT------DFNIVMTTLDGRLMNTREMYFSPTLTDKGDAYHLVMKASLSPSQ 170 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 + V T + + ++ + E Sbjct: 171 YVAFEYHFPKTGYLHTVALKTVGMQRLLNSASPPQLDWKTTTFRNSISIDYENRYTEFTF 230 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK----YLSDGH 282 ++ E W+ +++++ IP S Sbjct: 231 GYEEDRVDYLSLNGEDKETREGIRWISYRQHFFSAILIPESPIPSASLTSVNLASDESLD 290 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 ++ F N L ++ T+ + G ++ T+ + E DL + + WG F +I Sbjct: 291 EKFTKSFETNYPLTLNKGNLDTSLTFYFGPTDYKTLQNLEGDL---ETSIPMGWGIFGWI 347 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 K +F+ + F + ++GIAI++ T+ V+L P+ K YVS MK ++P I+ + K Sbjct: 348 NKFIFLPLFEFLSSFLSYGIAIIVMTLIVRLAMSPVTYKSYVSQIKMKLLRPDIEVINGK 407 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 FK + Q+ + LY NP++GC P L+Q+PVF+A++ ++ +R + W Sbjct: 408 FKDDAVKR-QQETMSLYSRAGANPMSGCIPALIQLPVFYALFSFFPVAFVLRDKS-FLWA 465 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-------QMKMSPPPADKG 515 DL++ D ++ L +PFY HV ++PI+ S+++F Q M P Sbjct: 466 DDLSSYD--SVLELGFNIPFYG---DHVSLFPILASIAIFFYTQMTTGQQSMPQQPGMPN 520 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 +I+ MP++ +F +++ +GL +Y+ SN+++I+ VI + + ++ Sbjct: 521 MKIIMYLMPLMMLFFFNNYASGLSLYYFVSNLLTILLMLVIKNFIIDDNKIHAKIEENKK 580 Query: 576 KNYN 579 K Sbjct: 581 KPKK 584 >gi|295134749|ref|YP_003585425.1| inner hypothetical protein translocase component YidC [Zunongwangia profunda SM-A87] gi|294982764|gb|ADF53229.1| putative inner membrane protein translocase component YidC [Zunongwangia profunda SM-A87] Length = 621 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 103/573 (17%), Positives = 224/573 (39%), Gaps = 39/573 (6%) Query: 25 YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID----DRAQALSMSPRVELKNPSLIG 80 P + +N T + + A + + L+N L Sbjct: 46 VTTPANADQQLANQNNTTAPATDSAAIAQAQSRLGAFGYSATLPSAEDKTTVLENDVLRL 105 Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 + KG ++ L+ Y +S V L+ N K L++ +T + Sbjct: 106 EVANKGGYIEEAVLKNYKT---YDSIPVYLVKDGNAKF----NLNFTTTDGRTLDTENLY 158 Query: 141 VWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL--FKIVDTVTNNSIDQIRFSP 198 IS +KL + + + I ++ + + N + Sbjct: 159 FEPSISKNGEDQVLSMKLKISDNEFLEYRYAIKPGDYMMDFNIRSQGLANTFNASQPINL 218 Query: 199 RGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKY 258 ++ ++ + + KY D+ + S++ + Sbjct: 219 DWQLKGYRHSKSISYENKYTVLGY-----EYEGDKYDDLGHGEDEETEKDVSYIAYKQHF 273 Query: 259 WASVFIPSKETSFHSQFKYL----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKE 314 ++S+ + + Y F+AN L + + G + Sbjct: 274 FSSILLTDTPFKTSKLTSQNLVEDEEIDTVYTKAFTANIPLELQAGELNYNMNWYYGPTD 333 Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374 + + Y D + L + + ++ +++ ++GIAI++ T+ V+++ Sbjct: 334 YKILKDY--DRNLDEIVPLGWGIFGWINKYVFIPFFAFLSSVLPSYGIAIIVMTIVVRIV 391 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 P+ K Y+S A MK ++P+I+E+ EK+K + + Q+ ++LY +P++GC P L Sbjct: 392 LSPVTYKSYLSQAKMKVLRPEINEINEKYKDNAMKK-QQETMKLYSKAGASPMSGCLPAL 450 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +QIP+F+A+++ + ++R + W DL++ D I L +PFY HV ++P Sbjct: 451 MQIPIFYALFQFFPSAFQLRQKS-FLWADDLSSYDV--IAELPFHIPFYGE---HVSLFP 504 Query: 495 IIMSLSMFIQMKM--------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 I+ S+++FI M+M + P ++ P++ +F +++ +GL +Y+ SN Sbjct: 505 ILASVAIFIYMQMTTGQSMQANQQPGMPNMKFLMYLSPIMMLFFFNNYASGLSLYYFTSN 564 Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 +I+I VI + E + ++++ +K Sbjct: 565 LITIGIMLVIKHVIVDEDKIHAKIQANKAKPKK 597 >gi|307717725|ref|YP_003873257.1| hypothetical protein STHERM_c00080 [Spirochaeta thermophila DSM 6192] gi|306531450|gb|ADN00984.1| hypothetical protein STHERM_c00080 [Spirochaeta thermophila DSM 6192] Length = 573 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 118/589 (20%), Positives = 222/589 (37%), Gaps = 43/589 (7%) Query: 1 MERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 ME N +A+ LS +++ Q ++ + + + + Q +S Sbjct: 1 ME--RNVVIAVILSAVVIIVSAVINQMLFMSQVPQVPAPVEEEVLSETPTPQATSSQEGS 58 Query: 57 LIDDR---------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 + A + V ++P + + +G L L + + Sbjct: 59 SLLSEGLPSGLSVEALLPAEDREVVYRSPLMEVVFSSRGGTVRSLKLLTHR---DGEESV 115 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 + P +NA+ + +L + + + Sbjct: 116 EMVYRPEGGRNAFSLSI------GKGDLLLDVPFQVRRPDERTVEFFQDVRLSGLPPFRV 169 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 +R E YLF + + N+ + + G + Sbjct: 170 TKRYRFYPEEYLFDLEVELVNSENSSLPLNFEGVMYTLDTGPQIGPPFAALDRYGEYRKF 229 Query: 228 SL----VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 ++ +W+ IS KY+ + IP + + Sbjct: 230 FYFLNGKRKEVRLDPGKISELEEGDPTWVAISGKYFTLIAIPLLPQYDVAFSTVVEGDLP 289 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP------RFEMLIDWG 337 + IT + G K + Y K E ++D Sbjct: 290 LGSTVYLYRP--AARSARITDLYRFYVGPKISGELSKYNKKNENSAGLSELHLEKVVDTS 347 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 ++ + + F+ ++ N+G+AI+L T+FVK+L FPL K Y S + M+ + PK++ Sbjct: 348 LLGWLEGILKFFLQIFFRIIPNYGVAIILLTLFVKILLFPLTHKSYESASKMQQLAPKME 407 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+R ++K PQ + + + LY+ +NPL GC P+LLQIP+FFA+Y + S ++R A Sbjct: 408 EVRNRYKD-DPQRMNQELALLYQKEGVNPLGGCLPLLLQIPIFFAMYGLFSSHFDLRGAT 466 Query: 458 FW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 F GWI DL+ + F P L G+ + + P+I+ ++ I K++ + Q Sbjct: 467 FIPGWIDDLSVPESVFHFDT----PLPLLGWTDIRLLPLILVVTQIISTKITQGASSSSQ 522 Query: 517 AMI-LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + + +PVVF+F L + PAGL++YW N+ +I QQ I ++ + Sbjct: 523 NQVFMYVLPVVFLFILYNAPAGLLVYWVAMNIFTIAQQLYINRVMKRKT 571 >gi|60682104|ref|YP_212248.1| putative inner membrane protein translocase component YidC [Bacteroides fragilis NCTC 9343] gi|253567112|ref|ZP_04844563.1| inner membrane protein oxaA [Bacteroides sp. 3_2_5] gi|81314832|sp|Q5LC41|OXAA_BACFN RecName: Full=Inner membrane protein oxaA gi|60493538|emb|CAH08325.1| conserved hypothetical membrane protein [Bacteroides fragilis NCTC 9343] gi|251944236|gb|EES84745.1| inner membrane protein oxaA [Bacteroides sp. 3_2_5] Length = 618 Score = 227 bits (577), Expect = 5e-57, Method: Composition-based stats. Identities = 99/600 (16%), Positives = 227/600 (37%), Gaps = 48/600 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49 M+ N + L I++ + + + +++ K + Sbjct: 1 MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKRYYDSIAVVQQQEEALRAKTEAAL 58 Query: 50 DNSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 N D + ++N + +++ KG + L+ Y + + Sbjct: 59 ANEKEETAADSASLFFSATKGKEAFTTIQNNLVEITLDNKGGRVYSALLKNY---MGQDK 115 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 V L + S+ + N + + + + ++L +A+ Sbjct: 116 KPVVLFNGSDASMNFNFY--------NKKGALQTKDFYFEAVNKTDSSVTMRLAADSASY 167 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 I F T+ D + + ++ + + + + + + + Sbjct: 168 IDFIYTLKPDNYLMSFVIKATGMDGKLAASTNYVDISWSQRARQIEKGYTYENRLADLTY 227 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + K + E W+ +++++SVFI ++ + + + Y Sbjct: 228 KYTGDDVDNLSASKDDEKSVSERLDWIAFKNQFFSSVFIAEQDFEKTTVKSKMEKQGSGY 287 Query: 286 QAKFSANE-ITILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGWFY 340 +SA P T + + G + T+ E+ + L + Sbjct: 288 IKDYSAEMSTFFDPTGKQPTDMYFYFGPNHYKTLTALDKGREEKWELNNLVYLGWPLIRW 347 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + + GI ++L T+ VK++ FP K Y+S+A M+ ++PKIDE+ Sbjct: 348 INKWITINVFDWLSGWGLSMGIVLLLLTIMVKIVVFPATWKTYMSSAKMRVLKPKIDEIN 407 Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +K+ + Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R + Sbjct: 408 KKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS-F 466 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD------ 513 W DL+ D T +PF H+ ++ ++M+++ + K + D Sbjct: 467 LWADDLSTYD--AFITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMQQQDTGAQPQ 521 Query: 514 -KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 ++ MP++F+F L+ +P+GL Y+ S +IS+V +I++ E L+ L + Sbjct: 522 MAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFISTLISVV-TMIILRRTTDENKLLTELEA 580 >gi|126661858|ref|ZP_01732857.1| putative inner membrane protein translocase component YidC [Flavobacteria bacterium BAL38] gi|126625237|gb|EAZ95926.1| putative inner membrane protein translocase component YidC [Flavobacteria bacterium BAL38] Length = 628 Score = 227 bits (577), Expect = 6e-57, Method: Composition-based stats. Identities = 113/619 (18%), Positives = 230/619 (37%), Gaps = 56/619 (9%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRI----------------EEMNNERKNIQ 41 ME N + L I+ W + P +E+ I+ Sbjct: 1 MEEKKLDLNSIIGFVLISGILI-WMLWSNAPTPEEIKEKEKKEQVEKQAKEVKTITSTIE 59 Query: 42 TVKQPNQVDNSYAAVLIDD----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 + N+ A + + E+KN L I+ KG + + G+ Sbjct: 60 AAPVADSTKNAAAQAQLGSFGYSATLPSATDAVTEIKNEVLSLKISNKGGYIVEATVLGF 119 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 +++ V ++ +N A LD ++ ++ ++ + Sbjct: 120 DQFEKNSNKAVKIIKDNN------ASLDITLNTSDNRALHTKDMYFEPKVTTEGKNQVLT 173 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 L K + E L + + + S ++ Sbjct: 174 LQLKAGPDQFLEYRYVLKPNEYMLDFAIRSQGLEKVVNTSKPLDLVWQLKTYRNEKSVTY 233 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS----FHS 273 E L + + + + S++ + S+ + + Sbjct: 234 ENRYTELVFEYEDGKDDYLNAAKDSEDEAKDVSYIAFKQHLFTSILLTDTKFKTAKFNSD 293 Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + + F+A ++ + G ++ ++ YE++L L Sbjct: 294 NLVDNEEVDTVFTKNFTAQVPLEFKNGALNYNMNWYYGPAKYEILNGYERNLDEIM--PL 351 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + + + + L FGIAI+L T+ V+++ P+ K Y+S A MK ++ Sbjct: 352 GWGIFGWINRYIFIPVFGFISGLGIGFGIAIVLFTILVRIVMSPVTYKSYLSQAKMKVLR 411 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P+I EL EKFK +P + Q+ ++LY +NP+AGC P ++Q+P+F+A+++ ++ Sbjct: 412 PEIAELNEKFKDNPMKK-QQETMKLYSKAGVNPMAGCLPAVMQMPIFYALFQFFPSMFDL 470 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS----- 508 R + W DL++ D +I+ L +PFY HV ++PI+ S+++F MKM+ Sbjct: 471 RQKS-FLWADDLSSYD--SIYQLPFHIPFYGS---HVSLFPILASIAIFFYMKMTTGDQA 524 Query: 509 ----PPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P I+ M P++ +F +++ +GL +Y+ SN+I+I VI Sbjct: 525 MSTPPQEGMPDMGKIMKIMIYISPLMMLFFFNNYASGLSLYYFISNLITIGIMLVIKNYI 584 Query: 561 GAEIGLIDRLRSTFSKNYN 579 E + +++ +K Sbjct: 585 VKEDKIHAQIQENKTKEKK 603 >gi|328946937|ref|YP_004364274.1| Membrane protein oxaA [Treponema succinifaciens DSM 2489] gi|328447261|gb|AEB12977.1| Membrane protein oxaA [Treponema succinifaciens DSM 2489] Length = 602 Score = 227 bits (577), Expect = 6e-57, Method: Composition-based stats. Identities = 128/599 (21%), Positives = 231/599 (38%), Gaps = 32/599 (5%) Query: 1 MERNWNYFVAIALSVIIV---YAWQNFYVYPRIEEMNNER------KNIQTVKQPNQVDN 51 ME N +AIALS I++ Q YV PR +E E+ K + Q Sbjct: 1 ME--KNTILAIALSTIVLVVSLFIQTKYVMPRQQERAREQAAEFEAKKEEQEAQIKAEKE 58 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 +A + Q + + +G L + V ++ Sbjct: 59 MISASFSEATVQNSEDVQEFVISTNKAKVTFTNRGGDITSYKLLEHKDK--ETGSGVEMV 116 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + + N F+ + + + T + + L +R Sbjct: 117 NNVTSSNRAFSLSFCGTENPALNDIFNVTKKDDYTILFYRDYEIKDSEGNPKKFTLGKRY 176 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 + Y FK+ ++ + + +R PQ ++ V +L Sbjct: 177 TFSPDDYAFKLDVSIISKEGGEFGIGGAAYTLRTAPQ--IGPKYDKKNRYEVRQFLALNG 234 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 K S S W G+ KY+ + PS + + K + + Sbjct: 235 GKKFRKNISDKFYDLNSVDWAGVGGKYFTMLVKPSSPSDMLGKIKVSTKSENEDGCQIFI 294 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID------WGWFYFIAKP 345 +L S T +E I + ++ G+ +I Sbjct: 295 PRKPVLDETSNDTYYIYVGPRQERELIKYNDQTKNAWNLSNAKFNEALQTTGFLSWIEII 354 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + + + N+GI+I++ T+ +K++ FPL K V + M+ IQPK+ L+EK+K Sbjct: 355 LKWCLEKINLIAHNWGISIIILTILLKIVLFPLNKNAAVGSLKMQKIQPKMKVLQEKYKN 414 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKD 464 Q L M +LYK NP++GC P+++Q+ + FA+Y V + E R A F GWI+D Sbjct: 415 -DQQKLSMEMQKLYKEAGYNPMSGCLPMVVQMFILFALYNVFNNYFEFRGASFVKGWIED 473 Query: 465 LAAADPTNIFTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMKMSP-----PPADKGQAM 518 L+A D +I+T +PF M+ + + P I + S + K++ A++ Q Sbjct: 474 LSAGD--SIWTWKRNIPFISAFTMNNLRLLPFIYTASQLLNGKITQYGNPGTGANQSQMK 531 Query: 519 ILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + + MP++F F + P+GL++YW+ SN+I I QQ VI + + ++ ++ Sbjct: 532 FMMYGMPLMFFFLFYNVPSGLLLYWAVSNIIQIGQQLVINSVMNKKRSELENEKTVNKN 590 >gi|53713895|ref|YP_099887.1| putative inner membrane protein translocase component YidC [Bacteroides fragilis YCH46] gi|265764240|ref|ZP_06092808.1| inner membrane protein oxaA [Bacteroides sp. 2_1_16] gi|81690656|sp|Q64T26|OXAA_BACFR RecName: Full=Inner membrane protein oxaA gi|52216760|dbj|BAD49353.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|263256848|gb|EEZ28194.1| inner membrane protein oxaA [Bacteroides sp. 2_1_16] gi|301163574|emb|CBW23125.1| conserved hypothetical membrane protein [Bacteroides fragilis 638R] Length = 618 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 99/600 (16%), Positives = 227/600 (37%), Gaps = 48/600 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49 M+ N + L I++ + + + +++ K + Sbjct: 1 MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKRYYDSIAVVQQQEEALRAKTEAAL 58 Query: 50 DNSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 N D + ++N + +++ KG + L+ Y + + Sbjct: 59 ANEKEETAADSASLFFNATKGKEAFTTIQNNLVEITLDNKGGRVYSALLKNY---MGQDK 115 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 V L + S+ + N + + + + ++L +A+ Sbjct: 116 KPVVLFNGSDASMNFNFY--------NKKGALQTKDFYFEAVNKTDSSVTMRLAADSASY 167 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 I F T+ D + + ++ + + + + + + + Sbjct: 168 IDFIYTLKPDNYLMSFVIKATGMDGKLAASTNYVDISWSQRARQIEKGYTYENRLADLTY 227 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + K + E W+ +++++SVFI ++ + + + Y Sbjct: 228 KYTGDDVDNLSASKDDEKSVSERLDWIAFKNQFFSSVFIAEQDFEKTTVKSKMEKQGSGY 287 Query: 286 QAKFSANE-ITILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGWFY 340 +SA P T + + G + T+ E+ + L + Sbjct: 288 IKDYSAEMSTFFDPTGKQPTDMYFYFGPNHYKTLTALDKGREEKWELNNLVYLGWPLIRW 347 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + + GI ++L T+ VK++ FP K Y+S+A M+ ++PKIDE+ Sbjct: 348 INKWITINVFDWLSGWGLSMGIVLLLLTIMVKIVVFPATWKTYMSSAKMRVLKPKIDEIN 407 Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +K+ + Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R + Sbjct: 408 KKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS-F 466 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD------ 513 W DL+ D T +PF H+ ++ ++M+++ + K + D Sbjct: 467 LWADDLSTYD--AFITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMQQQDTGAQPQ 521 Query: 514 -KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 ++ MP++F+F L+ +P+GL Y+ S +IS+V +I++ E L+ L + Sbjct: 522 MAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFISTLISVV-TMIILRRTTDENKLLTELEA 580 >gi|332877632|ref|ZP_08445375.1| membrane protein insertase, YidC/Oxa1 family domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684381|gb|EGJ57235.1| membrane protein insertase, YidC/Oxa1 family domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 606 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 119/603 (19%), Positives = 232/603 (38%), Gaps = 43/603 (7%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME + L I+ W P EE+ + + + N N+ A Sbjct: 1 MEEKKFDLKSIIGFVLIF-ILLLWVMNNNRPTQEELAKRKAEQEQAAKANNPQNNAATAA 59 Query: 58 ID-------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 AQ + ++N + +IN KG ++ L+ + S V L Sbjct: 60 TADLGAFAYSNAQPTAKDGVTVIENKDVKLTINNKGGDLKEVLLKQFKT---YESMPVYL 116 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 + N A + N+ ++ S + + K N E Sbjct: 117 IKDKN------AIFALNFKTTQGQELNTQQLYFEPSLSQKDGKQLLSMKVKTGENSYLEY 170 Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 +L E Y+ + S +P + K + + + + + Sbjct: 171 VYTLPAEGYMVDVAVRSQGLSGVLNSQNPIELVWGLKARRMEKSVTYENRYTQSAIRYAD 230 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + + + E SW+ + SV I + Y K+ Sbjct: 231 DKIN-RMSQGGNSGTKEEQVSWVAYKQHLFTSVLISDSAFANGDFLSYNIANEESKDVKY 289 Query: 290 SANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + N + P G ++ + + G ++ + Y + + + WG F ++ K Sbjct: 290 TKNLKSTFPLKTKGGELSESLHFYFGPSDYNVLKQYNDKYELTEL-IPLGWGIFGWLNKW 348 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 +F+ + F + G+ I+L T+ V+LL P+ K YVS A MK ++P+I+E+ +K+ Sbjct: 349 LFIPLYNFLADYFSVGLVIILMTIIVRLLLSPIVYKSYVSQAKMKVLRPEIEEINKKY-- 406 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 P Q+ + LY +NP++GC P LLQ+PVF A++ +R + W +DL Sbjct: 407 EEPMKRQQETMALYSKAGVNPMSGCIPALLQLPVFLALFNFFPTEFGLRQKS-FLWAEDL 465 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI--LNW 522 ++ D IF L +PFY HV ++P++ S+++FI M+ Q + + + Sbjct: 466 SSYD--AIFELPFSIPFYGS---HVSLFPLLASVAIFIYSMMTMAQTVQPQQPGMPNMKF 520 Query: 523 M----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 + PV+ +F +++ +GL +Y+ SN+++I+ I E + +++ Sbjct: 521 LIYLSPVMMLFFFNNYASGLSLYYFVSNLLTILIMLAIKHWILDEKKIHAQIQEN-KMKP 579 Query: 579 NSQ 581 + Sbjct: 580 KKE 582 >gi|325297917|ref|YP_004257834.1| Membrane protein oxaA [Bacteroides salanitronis DSM 18170] gi|324317470|gb|ADY35361.1| Membrane protein oxaA [Bacteroides salanitronis DSM 18170] Length = 621 Score = 225 bits (573), Expect = 2e-56, Method: Composition-based stats. Identities = 103/602 (17%), Positives = 226/602 (37%), Gaps = 47/602 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPR------------IEEMNNERKNIQTVKQPNQ 48 M+ N V L ++ + + + IE + +++ +Q ++ Sbjct: 1 MD--KNTLVGFVLIGAVIVGFSIYSRPSQEEMERAQHYQDSIETVVRQQEQMQKAQEAEA 58 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 V A L+N + + + KG + L+ Y+ + Sbjct: 59 VQTLRLDSTSQFFAHTQGSEEFTVLENNVVQLTFSNKGGRVSKAMLKEYN---DQQKQPL 115 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L + A L++ + +S + + + T ++L +N ++ F Sbjct: 116 VLFDGED------ASLNFGFEGKTENIMSSGLYFQPV--NVTDTTVTMRLNAQNGGHLDF 167 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 + D + L + + + + + ++ + ++ + Sbjct: 168 IYRLLPDSYMLDFTIQASGLQNFFSPSVKTMTIDWNQRARQMEKGYNFEQRYTSLTYKPA 227 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 Y K E+ W+ ++Y++ VF+ K + + + Y + Sbjct: 228 GESFDYLSETKDEKETIPEALDWVAFKNQYFSCVFMAEKNFENATLDSKMEQKESGYMKR 287 Query: 289 FSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEK---DLAIPRFEMLIDWGWFYF--- 341 + A+ T P + + + G F T+ K D E L+ GW Sbjct: 288 YHADMQTAFDPTGAQPSHFQFYFGPNHFKTLLASNKLSFDNKDQELEDLVYLGWPIIRLI 347 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 L + + + GI I+L T+ VK+L P K ++S+A M+ ++P +D++ E Sbjct: 348 NRWFTINLFDWLSGMGLSMGIVILLMTIIVKILVLPTTWKSFISSAKMRALKPYVDKINE 407 Query: 402 KFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 K+ + Q+ + LY + ++P+ GC P+L+Q PVF A++ + ++E+R + Sbjct: 408 KYPKQEDALKKQQETMSLYSQYGVSPMGGCLPMLIQTPVFMALFFFVPNAIELRQQS-FL 466 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD------- 513 W DL+A D ++ +P H+ ++ ++ S + I + D Sbjct: 467 WADDLSAYDDLIHWST--SIPLLGN---HLSLFCLLFSATTVINQIVMMKQQDTGANPQM 521 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++ MPV+F F + + +GL Y+ S ++ I+ +M+ E L+ +L + Sbjct: 522 AAMKWMMYIMPVMFFFIFNEYASGLSYYYFISGLLGIL-TLWVMRRMTDEKKLLAQLDAN 580 Query: 574 FS 575 Sbjct: 581 KK 582 >gi|78776724|ref|YP_393039.1| putative inner membrane protein translocase component YidC [Sulfurimonas denitrificans DSM 1251] gi|78497264|gb|ABB43804.1| protein translocase subunit yidC [Sulfurimonas denitrificans DSM 1251] Length = 536 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 130/582 (22%), Positives = 232/582 (39%), Gaps = 57/582 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV---- 56 M N +A+ LS + A+ Y + E + + + + + V Sbjct: 5 MTPNQRLIIAVLLSFVFFIAYTAIYPTEQPTETAQVQNSTEQKVELKEAPKVEDIVGHKI 64 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + A +S LK+ I I+ G + L ++N + L P + Sbjct: 65 SAQEATIANDLSTLTTLKSNDFILKIDTLG-RISSKVLLQ--EMYNTNDNVHAQLIPQSG 121 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 F + IS L T ++ + +N+ + I+ Sbjct: 122 TKPLFIRFLDPALNEE---ATKIPYTADISEINLQDTPQKVVLTQKLSNLTVTKEITFYA 178 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + ++T + + + + N + L + Sbjct: 179 DGHYDVDVSLTQD---------KRYFIYLGQRPKVNEKEQMMAAVGALIYNDEELLTIIE 229 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 ++ + D+Y AS+ S + D + F A + Sbjct: 230 DGDANERKSYSHIELAAAFDQYSASIMY---GFSKDTNIIIDRDRDSNPIVYFEAVQNMK 286 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G + G K + T+H + P I++GWF F +KP+F L+ + + L Sbjct: 287 FSG---------YIGQKRYKTLHAIK-----PILTNAIEYGWFTFASKPLFQLLMWLHGL 332 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GN+G +I+ TV ++++ +PL K VS MK+I P++ L+ K+K PQ + A++ Sbjct: 333 IGNWGWSIVALTVLIRVVLYPLTYKGMVSMQKMKDIAPQVKALQAKYKG-DPQRMNAAVM 391 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +YK H NPL GC P+LLQIPVFFAIY+V+ ++E++ AP+ W+ DL+ D T Sbjct: 392 DMYKKHGANPLGGCLPMLLQIPVFFAIYRVLLNAVELQGAPWMLWVNDLSRMDSTF---- 447 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFP 535 + PI+M SM+ Q K++P D Q I ++P++F F +FP Sbjct: 448 ---------------VLPILMGASMYYQQKLTPSNFTDPLQEKIFKFLPIIFTFFFITFP 492 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +GL++YW +N+ SI QQ ++ + K Sbjct: 493 SGLVLYWFVNNMFSIGQQFIVNQQFKNAKDAQIAAHKNVEKK 534 >gi|330752544|emb|CBL87491.1| inner membrane protein translocase component YidC [uncultured Flavobacteria bacterium] Length = 564 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 112/580 (19%), Positives = 230/580 (39%), Gaps = 37/580 (6%) Query: 8 FVAIALSVIIVYAWQNF-YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 V L I++ + F + + EE ++IQ + + + + + + Sbjct: 9 LVGFVLIAIVLIFFNVFIFPKFQPEEKETASQSIQDFSRNDNLLKNEEVL------DDII 62 Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 L+N + I+ G + +++ L+ Y L + +T + + Sbjct: 63 SEKLFTLENEKIKLLISNIGGRINEVILKEYKNYSGDELK---LFTADSTSFSLDFLTNK 119 Query: 127 VSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTV 186 N I + + +KL +N+ + ++D Y + Sbjct: 120 NIKTENRNFIA-----------IDSSSNFLKLRCLVSNDSYIDYVYTIDNDYKVDLDLEF 168 Query: 187 T--NNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 + I + PQT + + K+ E + K S + Sbjct: 169 YGLDELIPRNVNYMNLEWKMKTPQTEKSKKNQEMYTGIYYQFKADNEVDNLSLTKDSEKD 228 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN-EITILPGKSIT 303 + +W+ ++++++FI S K + ++ Y + SA EI + Sbjct: 229 IKSNLNWVAFKQQFFSAIFISKNGFSKPISLKVSKNENSIYIKELSAKFEIPYGHNSTEK 288 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + + G +PT+ +Y D L + + + L + N+G+ Sbjct: 289 HSFQFYFGPNHYPTLKNY--DSGFEEIIPLGWSLFRWVNKYIIINLFDFLSKYFNNYGLI 346 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ +KL P K Y+S A MK ++P+ID++ +K P +Q+A + LY+ Sbjct: 347 ILLLTIIIKLALAPFTYKAYLSQAKMKVLKPEIDKISDK--DKDPMKVQQATMNLYRKAG 404 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NP+ GC P+L Q P+ A+++ S+E+R + W DL+A D +I L +PFY Sbjct: 405 VNPMGGCLPMLFQFPILIAMFRFFPASIELRQKS-FLWADDLSAYD--SILELGFNIPFY 461 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMS--PPPADKGQAM-ILNWMPVVFVFALSSFPAGLII 540 HV ++ ++M++S + +M+ Q ++ MP++F+ +++ AGL Sbjct: 462 G---DHVSLFTLLMTISTLLYTRMNTSMATGQMAQMKWMMYLMPIMFLGFFNNYAAGLSY 518 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 Y+ +N+ + QQ + K + L+ + K Sbjct: 519 YYFLANMFTFGQQYFMKKFFINDDALLAEIEKNKRKPRKK 558 >gi|254495503|ref|ZP_05108427.1| 60Kd inner membrane protein [Polaribacter sp. MED152] gi|85819859|gb|EAQ41016.1| 60Kd inner membrane protein [Polaribacter sp. MED152] Length = 625 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 104/622 (16%), Positives = 239/622 (38%), Gaps = 62/622 (9%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPR-------------IEEMNNERKNIQTVK 44 ME+ N F+ + L I+ ++ + NN+++N + + Sbjct: 1 MEQKKFDYNSFIGMILLAGILL---WYFNTNKPEELEEQQPQEIVETTSNNDKENTKNIA 57 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSP------RVELKNPSLIGSINLKGAQFDDLNLRGYH 98 P ++S + + ++ A + S ++N + +I+ KG Q ++ Y Sbjct: 58 APVFENDSLKQIALQNKLGAFAQSALNGKEGTTVIENSLVKLTIDNKGGQIVKALVKNYQ 117 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 +S + ++ +N A + + + N+ ++ S T + + Sbjct: 118 T---YDSLPLYMIKDNN------ASFNINFGTTDNRILNTKDLFFEPSLTNSGENTVLSM 168 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 K +++ E + F + ++ + +D + S I + Sbjct: 169 KLKVSDSQYLEYRYEVKPDDYF-VDFSIRSQGLDGVFNSSNP-INLDWTLDGFRHERSLK 226 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + + + + + W+ ++ S + + + Sbjct: 227 TENTMYSYYYYKSEDEVEYLNAGNTEIANDIDWVAYKQHFFMSNLLTDTPFNNATVTSSD 286 Query: 279 SDGHARYQAKFSANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 + F+ P G + F G ++ + +E ++ Sbjct: 287 LVEDEKLDTVFTKRYELKTPLALTGGELNYNMKWFYGPSDYNLLKTFEGTDLDETADLG- 345 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 + + + + + + N+G+ I+L T+ V++L PL K Y+S+A MK I+P Sbjct: 346 WGIFGFLNRNVFYPVFNLLEGFLTNYGLIIILMTIVVRILMSPLVYKSYLSSAKMKVIRP 405 Query: 395 KIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 ++ EL +K+ Q+ + + + +N ++GC P LLQ+P+FFA++K ++ + Sbjct: 406 ELQELNKKYPGKENAMKRQQETMAIQRKAGVNMMSGCIPALLQMPIFFALFKFFPTNIAL 465 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + W DL++ D IF L +PFY HV ++PI+ S+++F M+M+ Sbjct: 466 RQES-FLWAPDLSSYDV--IFNLPFEIPFYG---DHVSLFPILASIAIFFYMRMNQSQQA 519 Query: 514 KGQA----------MILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 QA ++ +M P++ + + + +GL +Y+ SN+++I VI Sbjct: 520 NMQAPTQEGMPDMSKMMKYMIYFSPIMMLIFFNRYASGLSLYYFISNLLTISIMLVIKNY 579 Query: 560 HGAEIGLIDRLRSTFSKNYNSQ 581 E + ++ + ++ Sbjct: 580 VIDEEKIHAQIEENKKRPEKAK 601 >gi|198275307|ref|ZP_03207838.1| hypothetical protein BACPLE_01468 [Bacteroides plebeius DSM 17135] gi|198271890|gb|EDY96160.1| hypothetical protein BACPLE_01468 [Bacteroides plebeius DSM 17135] Length = 619 Score = 224 bits (570), Expect = 4e-56, Method: Composition-based stats. Identities = 101/604 (16%), Positives = 218/604 (36%), Gaps = 39/604 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V L ++ + Y P EE + +++Q + Sbjct: 1 MD--KNTLVGFILIGAVIVGFGI-YNRPSQEERARAQHYQDSIQQVIKQQEEAQEKQAAA 57 Query: 61 R-------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 A L+N + + + KG + L+ Y Sbjct: 58 AIEAARPDSTSLFFQAAQGTEQFTVLENELVQLTFSNKGGRVSKALLKEYK---DQKKQP 114 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 + L + A +++ N + + + + + T ++L N ++ Sbjct: 115 LVLFDGED------ASMNFGFEGKNENILSQQMYF--EATNVTDSTVTMRLNAANGGHLD 166 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 F + + + + V + + + + + ++ + ++ Sbjct: 167 FNYRLLPNSYMVDLTVQASGMQNFFSPSTKSMNIEWKQRARQMEKGYNFEQRYTSLTYKP 226 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 Y K ES W+ ++Y++ VF+ + + + + Y Sbjct: 227 VDDSFDYLSETKDEKETIPESLDWVAFKNQYFSCVFMAEQNFDNATLESKMEQQGSGYMK 286 Query: 288 KFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHH------YEKDLAIPRFEMLIDWGWFY 340 ++A+ T P + + + G F T+ +KD + L Sbjct: 287 NYAADMKTAFDPTGAKASHMQFYFGPNHFKTLLASNDLSFKDKDQELEDLVYLGWPIIRL 346 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 L + + G+ I+L T+ VK+L P K ++S+A M+ ++P +D++ Sbjct: 347 INRWFTINLFDWLSGWGLSMGMVILLMTIIVKVLVLPTTWKSFISSAKMRALKPYVDKIN 406 Query: 401 EKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 K+ + Q+ + LY+ +N++P+ GC P+LLQ PVF A++ + ++E+R + Sbjct: 407 AKYPKQEDALKKQQETMALYRQYNVSPMGGCLPMLLQTPVFMALFFFVPNAIELRQQG-F 465 Query: 460 GWIKDLAAADPTNIF--TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 W DL+A D + + + + I ++ + M Q M P Sbjct: 466 LWADDLSAYDDLISWSYHIPLLGNHLSLFCLLFSITTVLNQIIMMKQQDMGNNPQMAAMK 525 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 ++ MPV+F F + + +GL Y+ S +I I+ IM+ E L+ +L + + Sbjct: 526 WMMYIMPVMFFFIFNDYASGLSYYYFISGLIGII-TMWIMRRMTDEKKLLAQLEANKKEP 584 Query: 578 YNSQ 581 + Sbjct: 585 SQQK 588 >gi|218461068|ref|ZP_03501159.1| putative inner membrane protein translocase component YidC [Rhizobium etli Kim 5] Length = 341 Score = 224 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 135/341 (39%), Positives = 189/341 (55%), Gaps = 16/341 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM----------------NNERKNIQTVK 44 ME N NYF+AIALSV+IV WQ Y+ PRIE T Sbjct: 1 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQQTEQVQQPAAGGTTPA 60 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + S A QAL+ +PRV + P+L GSINL GA+ DDL L+GYH V + Sbjct: 61 PTSGTAPSGQAAATATLEQALAKNPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDS 120 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 SPI+TL SP+ TK+ YF EL Y+ + +P ++T+W G LT TP+ L + N Sbjct: 121 SPIITLFSPAETKDGYFTELGYIGSDATGAVPGASTLWTAPEGAKLTEKTPVTLSYTNDK 180 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F RTIS+DE Y+F + D + N + S GR+ R+ T + + + EGFI V+ Sbjct: 181 GLTFTRTISVDERYMFTVADKIENTGQAPVSLSSYGRVTRYNKPTTPSVYVLHEGFIGVI 240 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 GD LVE KYS +EK ++ + WLGI+DKYWA+ +P + +++ ++F + +DG R Sbjct: 241 GDDGLVETKYSAVEKEAVMPAKSTGGWLGITDKYWAATIVPPQTSAYEARFSHFADGQPR 300 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 YQA + + T+ PG+SI N +FAGAKE P I YE Sbjct: 301 YQADYKDDAFTVAPGQSIELKNLVFAGAKEVPVIDGYEASY 341 >gi|317011581|gb|ADU85328.1| putative inner membrane protein translocase component YidC [Helicobacter pylori SouthAfrica7] Length = 548 Score = 224 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 133/582 (22%), Positives = 230/582 (39%), Gaps = 64/582 (10%) Query: 1 MERNWN----YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N +A+ALS + + + F+ P ++ + + A Sbjct: 1 MDKNNNTNLRLILAVALSFLFITLYSYFFQKPNKTTTETTKQEVTHNNTALNPNAPTATQ 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT----LLS 112 + + I+ G + + L+ L S Sbjct: 61 NFSATQTIPQENLLSAISFEHARIEIDFLG-RIKQVYLKDKKYLTPKQKGFFEHVSHLFS 119 Query: 113 PSNTKNAYFAELDYVSTA---------NNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 + EL + + + S L P + L Sbjct: 120 SKESVQPPLKELPLLGDNLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLG 179 Query: 164 NNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 + ++ + D+ HY +I NN P I A G + Sbjct: 180 DLVIIKTLTFYDDLHYDLQIAFKSPNN------IIPSYVITNGYRPVADLDSYTFSGVLL 233 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 DK + + + D + + +L D+Y+ ++ F Sbjct: 234 ENNDKKIEKIEDKD---AKEIKRFSNILFLSSVDRYFTTLLFTDNPQGFEVLI------- 283 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 + I T + G K++ ++ P I++G F Sbjct: 284 -NPETGTKNPLGFISLKNEATL--HGYIGPKDYRSLKAIS-----PMLTDAIEYGLITFF 335 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS +K + PK+ EL+E+ Sbjct: 336 AKGVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQKLKELAPKMKELQEE 395 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ ++E++ + + WI Sbjct: 396 YKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVLYNAVELKSSEWILWI 454 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILN 521 DL+ DP I P++M SM+ ++P D QA I Sbjct: 455 HDLSIMDPYF-------------------ILPLLMGASMYWHQSVTPNTMTDPMQAKIFK 495 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +P++F L +FPAGL++YW+ +N++S++QQ +I K+ + Sbjct: 496 LLPLLFTLFLITFPAGLVLYWTTNNILSVLQQLIINKVLENK 537 >gi|42527897|ref|NP_972995.1| putative inner membrane protein translocase component YidC [Treponema denticola ATCC 35405] gi|81700132|sp|Q73JM1|OXAA_TREDE RecName: Full=Inner membrane protein oxaA gi|41818942|gb|AAS12914.1| inner membrane protein [Treponema denticola ATCC 35405] Length = 582 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 118/588 (20%), Positives = 240/588 (40%), Gaps = 36/588 (6%) Query: 4 NWNYFVAIALSVIIVYAW----QNFYV-------YPRIEEMNNERKNIQTVKQPNQVDNS 52 N +A+ LS+++ W Q ++ P + + + Q + S Sbjct: 2 KKNTVLAVVLSMLVFGGWLYIQQKYFPTEYNVPQKPVAQAQGQNPTSSEIAVQTSSNQIS 61 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 + + + S ++ + KG L+ + S+ + + + Sbjct: 62 NSMIEAVADSDYPSREQTYVIETDIIRAVFTNKGGDIISYKLKEH-ASAGSDERVEMIEN 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF---E 169 + A L L N K + IKL + + +F + Sbjct: 121 VTERNRALSLALGGHDAQAVDLLFNVKEESLSDGRKQIGFYRDIKLKNTDGSETVFTLAK 180 Query: 170 RTISLDEHYLFKIVDTVTNNSID---QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 R + Y+F + T+ S + + + + A+ Sbjct: 181 RYTFIPGDYMFTLEVTIDGKEGMRGLSFGDSAYTLRSAPQIGPEWDKVNDKYEYRALSYF 240 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + +++ I ++ SW+ +S KY++ + IP +G + Sbjct: 241 ANEKKKEDRSITDGKTKAVNDLASWVSVSGKYFSFIIIPKDPIQKMFFSGIKEEGAKLHN 300 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY----EKDLAIPRF---EMLIDWGWF 339 ++F + I+ G + ++ G ++ Y + + G+ Sbjct: 301 SQFFISRQPIV-GNAAYDQYRVYIGPSSEKILNSYNSAAANNYGYENLRIDSLAASSGFL 359 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + + + +M FY ++ N+G+A++L T+ ++++FFPL KK +T M+ +QP+I+EL Sbjct: 360 APLERVLKFVMEIFYKIIPNWGVALLLLTLLMRIIFFPLTKKSSEATKRMQELQPQINEL 419 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 ++K+K +P Q L M++ YK NP +GC P+L+Q+P FA++ + + E R A F Sbjct: 420 QQKYKNNP-QKLNAEMVKFYKEAGYNPASGCLPLLIQLPFLFAMFGLFNNYFEFRGASFI 478 Query: 460 -GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ-- 516 GWI DL+ D +I +PF + + + PII + S + K++ P Q Sbjct: 479 PGWIPDLSVGD--SILKFGFTIPFL--NWTDLRLLPIIYTASQLLHGKLTQTPGQSQQNP 534 Query: 517 -AMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 I+ +MP+ F F + P+GL+++W++SN++ ++QQ +I K Sbjct: 535 SMKIMIYFMPLFFFFLFYNAPSGLLLFWTFSNILMLLQQLIINKSMKK 582 >gi|254672457|emb|CBA05875.1| 60kDa inner-membrane protein [Neisseria meningitidis alpha275] Length = 298 Score = 223 bits (568), Expect = 6e-56, Method: Composition-based stats. Identities = 94/263 (35%), Positives = 145/263 (55%), Gaps = 25/263 (9%) Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 G + L+AG + I + + ++ D+G ++ A P+F L++ +N+ Sbjct: 49 QNGAKSEASINLYAGPQTTSVIANIADN-----LQLAKDYGKVHWFASPLFWLLNQLHNI 103 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +GN+G AI++ T+ VK + +PL Y S A M+ PK+ ++EK+ Q+AM+ Sbjct: 104 IGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQAIKEKYGD-DRMAQQQAMM 162 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 QLYK INPL GC P+LLQIPVF +Y + S+E+R AP+ GWI DL+ +DP Sbjct: 163 QLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAPWLGWITDLSRSDPYY---- 218 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 I PIIM+ +MF Q ++PPP D QA ++ MP+VF FPA Sbjct: 219 ---------------ILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFFPA 263 Query: 537 GLIIYWSWSNVISIVQQAVIMKM 559 GL++YW +N+++I QQ I + Sbjct: 264 GLVLYWVVNNLLTIAQQWHINRS 286 >gi|311746146|ref|ZP_07719931.1| inner membrane protein OxaA [Algoriphagus sp. PR1] gi|126576367|gb|EAZ80645.1| inner membrane protein OxaA [Algoriphagus sp. PR1] Length = 599 Score = 223 bits (567), Expect = 7e-56, Method: Composition-based stats. Identities = 118/601 (19%), Positives = 235/601 (39%), Gaps = 43/601 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + L ++ + F+ + QT + + +++ Sbjct: 1 MD--KNQATGLILFAAVILVYSFFFASGPEVPVEEVEAPAQTETVQDVKPAMESQAPVEN 58 Query: 61 RAQ---------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + A V L+N + SI+ KGA +++ L+ Y S Sbjct: 59 DSMISQANLAKFGALATLASGEEQLVTLENDLIKVSISTKGASVNEVELKEYK---SWTQ 115 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 + L+ ++K A+ E + S N N + N + + L + Sbjct: 116 EPLLLIDSESSKMAFSLESNTGSVNLNDLYFNPSL--NSSQDEEGNAVHTLTLSAGTESG 173 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 + + D Y + S S + + + + Sbjct: 174 EIIQTFTLKDGSYEVHKSLKIDRFSNYFTGNSLQFTWADQVRKQERDIGESRRKTQVNYF 233 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 S + + E W+G S +++ + I + + + + Sbjct: 234 LASDSYENLGVGDDLEQEQVAEPVKWIGFSQRFFTAGIIADETFQDVNLAQSTPADSSFV 293 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF---YFI 342 + +P K T + + G + + + FE +D G+F + Sbjct: 294 K---YMETSLSIPLKDNTASFRFYFGPDNYKGLKKVTE-----GFEKNVDMGYFFVSWVN 345 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 + L ++ N+G+ I+L + +KL PL K YV A M+ I+P+IDEL+EK Sbjct: 346 KYIIVNLFAFLEKFFSNYGVIIILIVLAIKLALSPLTYKSYVGMAKMRVIKPEIDELKEK 405 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + P ++ Q+ ++L+ ++P++GC P++LQ+P FA++ ++++R + W Sbjct: 406 YGDDPTKM-QQEQMKLFGKLGVSPISGCLPMVLQMPFLFAMFFFFPNAIQLRQES-FLWA 463 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMIL 520 DL+ D F L +PFY HV ++ ++M++S + K + + Sbjct: 464 NDLSTYD--TFFNLPFTIPFYGS---HVSLFTLLMTVSQIVYTKFNNQLTTATGPMKNLG 518 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 MPV+F+F L+S+PAGL Y+ SN+++ QQAVI K+ + + ++ + KN N Sbjct: 519 YIMPVMFMFILNSYPAGLSFYYFVSNMVTFGQQAVI-KLFVDDDKIRAKVEESKRKNANK 577 Query: 581 Q 581 + Sbjct: 578 K 578 >gi|307721586|ref|YP_003892726.1| membrane protein insertase, YidC/Oxa1 family [Sulfurimonas autotrophica DSM 16294] gi|306979679|gb|ADN09714.1| membrane protein insertase, YidC/Oxa1 family [Sulfurimonas autotrophica DSM 16294] Length = 534 Score = 223 bits (567), Expect = 8e-56, Method: Composition-based stats. Identities = 127/588 (21%), Positives = 223/588 (37%), Gaps = 70/588 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N VA+ LS+I + + P E+ + V + + Sbjct: 5 MSPNQRLIVAVLLSIIFFVGYTAIF--PSKEQKVADNAKTDKVTSKTDTKKDVTTRVEEA 62 Query: 61 RAQALSMSPRV---------ELKNPSLIGSINLKGAQFDDLNLR--GYHLDVSSNSPIVT 109 A+S ++ +KN + I I+ G + L + + ++ ++ Sbjct: 63 SGHAISQQEKIAQSISNNIVTIKNKNFILKIDTLG-RMSSKELLEDKFRNTDNLHAQVI- 120 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 PS + + + + +S K T + Sbjct: 121 ---PSTGTKPLYIRFAEDAINDEATKVPYTANVSEVSLKDKPVTVTLTQKLSALTVTKVL 177 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 + D HY KI + + +P+ + V I D + Sbjct: 178 TFYT-DGHYDAKIS---------TSKDVRHYIYLGDRPKVSKKLMAVAGALIYTDDDVAH 227 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 + + + + D+Y A + + + + D Y Sbjct: 228 IIED----GDAEGRQVFQGVKLASSFDQYTAIILYGFTKDTNIIVERGKDDNPVVYF--- 280 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 + G KE + + P I++GWF F AKP+F + Sbjct: 281 ---------DARKDENIHGYIGPKEHKILKAID-----PVLTNAIEYGWFTFAAKPLFAV 326 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 +S+ + + GN+G AI+ T ++ + +PL K VS MK + PK+ EL+E + PQ Sbjct: 327 LSWLHGIFGNWGWAIIALTALIRAVLYPLTYKGMVSMQKMKELAPKLKELKE-KYKKDPQ 385 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L A +++YK H NPL GC P++LQIPVFFA+Y+ + ++E++ A + WI DL+ D Sbjct: 386 RLNAATMEMYKKHGANPLGGCLPMILQIPVFFALYRTLLNAVELQGADWILWINDLSRMD 445 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFV 528 P + PI+M SMFIQ +M+P D Q + ++PV+F Sbjct: 446 PYY-------------------VLPILMGASMFIQQRMTPNNFTDPMQEKVFKYLPVIFT 486 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 F +FP+GL++YW +N+ SI QQ ++ + + K Sbjct: 487 FFFVTFPSGLVLYWFTNNLFSIAQQFMVNQQFKNAKDAKVAIEKNSEK 534 >gi|325474885|gb|EGC78071.1| inner membrane protein oxaA [Treponema denticola F0402] Length = 582 Score = 222 bits (566), Expect = 8e-56, Method: Composition-based stats. Identities = 118/588 (20%), Positives = 240/588 (40%), Gaps = 36/588 (6%) Query: 4 NWNYFVAIALSVIIVYAW----QNFYV-------YPRIEEMNNERKNIQTVKQPNQVDNS 52 N +A+ LS+++ W Q ++ P + + + Q + S Sbjct: 2 KKNTVLAVVLSMLVFGGWLYIQQKYFPTEYNVPQKPVAQAQGQNPTSSEIAVQTSSNQIS 61 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 + + + S ++ + KG L+ + S+ + + + Sbjct: 62 NSMIEAVADSDYPSREQTYVIETDIIRAVFTNKGGDIISYKLKEH-ASAGSDERVEMIEN 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF---E 169 + A L L N K + IKL + + +F + Sbjct: 121 VTERNRALSLALGGHDAQAIDLLFNVKEESLSDGRKQIGFYRDIKLKNTDGSETVFTLAK 180 Query: 170 RTISLDEHYLFKIVDTVTNNSID---QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 R + Y+F + T+ S + + + + A+ Sbjct: 181 RYTFIPGDYMFTLEVTIDGKEGMRGLSFGDSAYTLRSAPQIGPEWDKVNDKYEYRALSYF 240 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 + +++ I ++ SW+ +S KY++ + IP +G + Sbjct: 241 ANEKKKEDRSITDGKTKAVNDLASWVSVSGKYFSFIIIPKDPIQKMFFSGIKEEGAKLHN 300 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY----EKDLAIPRF---EMLIDWGWF 339 ++F + I+ G + ++ G ++ Y + + G+ Sbjct: 301 SQFFISRQPIV-GNAAYDQYRVYIGPSSEKILNSYNSAAANNYGYENLRIDSLAASSGFL 359 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + + + +M FY ++ N+G+A++L T+ ++++FFPL KK +T M+ +QP+I+EL Sbjct: 360 APLERVLKFVMEIFYKIIPNWGVALLLLTLLMRIIFFPLTKKSSEATKRMQELQPQINEL 419 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 ++K+K +P Q L M++ YK NP +GC P+L+Q+P FA++ + + E R A F Sbjct: 420 QQKYKNNP-QKLNAEMVKFYKEAGYNPASGCLPLLIQLPFLFAMFGLFNNYFEFRGASFI 478 Query: 460 -GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ-- 516 GWI DL+ D +I +PF + + + PII + S + K++ P Q Sbjct: 479 PGWIPDLSVGD--SILKFGFTIPFL--NWTDLRLLPIIYTASQLLHGKLTQTPGQSQQNP 534 Query: 517 -AMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 I+ +MP+ F F + P+GL+++W++SN++ ++QQ +I K Sbjct: 535 SMKIMIYFMPLFFFFLFYNAPSGLLLFWTFSNILMLLQQLIINKSMKK 582 >gi|225849760|ref|YP_002729994.1| inner membrane protein OxaA [Persephonella marina EX-H1] gi|225644791|gb|ACO02977.1| inner membrane protein OxaA [Persephonella marina EX-H1] Length = 537 Score = 222 bits (566), Expect = 9e-56, Method: Composition-based stats. Identities = 120/584 (20%), Positives = 232/584 (39%), Gaps = 84/584 (14%) Query: 2 ERNWNYFVAIALSVIIVYAWQNF--YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 E F+ +++ A+ Y+YP +K + V+ ++ + Sbjct: 7 EMQKRMFIFFIAVAVLLIAYSIISSYLYPTEPSPEKNQKTQEVVEVKEEIKEQRKVPEPE 66 Query: 60 DRA-----------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 +R A ++ V + I+ GA+ + + + D+ Sbjct: 67 ERITYKQTGDYDLLLDKRRINADNLKDTVRINTDFGYIEISKIGARIVSIYVEKFKTDMI 126 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 S+ S T + E+ S + S + +++ Sbjct: 127 SD--------FSKTNRLFPTEIITTSPELTALINFSPYSFRQEGDRLIFELKQ------- 171 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 +I + +++ + + ++ A + G I Sbjct: 172 -GDISVRKIFEVNKDSTLSLKI------DTEGLEKYGLSVINGISLKAESRAFGHSGAI- 223 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 K+ E D + W G +KY+ + S Sbjct: 224 ---IKTDKELIKLDADIDKKQTIRGHILWAGEENKYFLQMLAVKGGFSAT---------- 270 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIP-RFEMLIDWG 337 + + + + + F F G K + + Y+K+ I ID+G Sbjct: 271 --HVVPIAEEKTVVFSEIPTSVEGFFFGGPKLYSLLGDITEKYKKEWNIDLSLRESIDFG 328 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +F + KP+F++M + Y+ + N+G+ I++ TV ++++ FPL K + M ++ P+I Sbjct: 329 FFGILGKPLFLIMHFIYDYIHNWGLTIIILTVLLRIVLFPLNHKSLKAMKKMADLAPEIK 388 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L++K+++ PQ LQ+ M++LY H NP++GC PI+ QIP+F A+Y V+ +++E++ P Sbjct: 389 KLQKKYQK-DPQKLQEEMMKLYAEHGTNPMSGCLPIVAQIPIFIALYNVLMVTVELKMVP 447 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W++DLA DP I PI+M +SM Q ++P DK Q Sbjct: 448 -FLWVQDLADKDPYY-------------------ILPILMGVSMIAQQWITPSS-DKNQK 486 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +I+ M VF F +FPAGL++YW +N++ I Q ++ K G Sbjct: 487 IIMYIMAFVFTFLFMNFPAGLVLYWLTNNILGIGQSFIVNKQMG 530 >gi|255009561|ref|ZP_05281687.1| putative inner membrane protein translocase component YidC [Bacteroides fragilis 3_1_12] gi|313147337|ref|ZP_07809530.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136104|gb|EFR53464.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 618 Score = 222 bits (566), Expect = 9e-56, Method: Composition-based stats. Identities = 97/600 (16%), Positives = 225/600 (37%), Gaps = 48/600 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49 M+ N + L I++ + + + +++ K + Sbjct: 1 MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKRYYDSIAVVQQQEEALKAKTEAAL 58 Query: 50 DNSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 N D + ++N + +++ KG + L+ Y + + Sbjct: 59 ANEKEETAADSASLFFNATQGKEAFTTIQNNLVEITLDNKGGRVYSALLKNY---MGQDK 115 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 V L + S+ + N + + + + ++L +A+ Sbjct: 116 KPVVLFNGSDASMNFNFY--------NKKGALQTKDFYFEAVNKTDSSVTMRLAADSASY 167 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 I F T+ D + + ++ + + + + + + Sbjct: 168 IDFIYTLKPDNYLMSFVIKATGMEGKLAATTNYVDISWSQRARQIEKGYTYENRLADLTY 227 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + + K + E W+ +++++SVFI ++ + + + Y Sbjct: 228 KYTGDDVDNLSASKDDEKSVPERLDWIAFKNQFFSSVFIAEQDFEKTTVRSKMEKQGSGY 287 Query: 286 QAKFSANE-ITILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGWFY 340 +SA P T + + G + T+ E+ + L + Sbjct: 288 IKDYSAEMSTFFDPTGKQPTDMYFYFGPNHYKTLTALDKGREEKWELNNLVYLGWPLIRW 347 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + G+ ++L T+ VK++ FP K Y+S+A M+ ++PKIDE+ Sbjct: 348 INKWITINVFDWLSGWGLGMGVVLLLLTIMVKVVVFPATWKTYMSSAKMRVLKPKIDEIN 407 Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +K+ + Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R + Sbjct: 408 KKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLVQFPILMALFMFVPSAIELRQQS-F 466 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD------ 513 W DL+ D T +PF H+ ++ ++M+++ + K + D Sbjct: 467 LWADDLSTYD--AFITFPFHIPFLGN---HLSLFCLLMTITNILNTKYTMQQQDTGAQPQ 521 Query: 514 -KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 ++ MP++F+F L+ +P+GL Y+ S +IS+V +I++ E L+ L + Sbjct: 522 MAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFISTLISVV-TMIILRRTTDEDKLLADLEA 580 >gi|319902327|ref|YP_004162055.1| protein translocase subunit yidC [Bacteroides helcogenes P 36-108] gi|319417358|gb|ADV44469.1| protein translocase subunit yidC [Bacteroides helcogenes P 36-108] Length = 615 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 109/601 (18%), Positives = 221/601 (36%), Gaps = 47/601 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-----RKNIQTVKQPNQVDNSYAA 55 M+ N + L I++ + + + + +Q + + + A Sbjct: 1 MD--KNTITGLVLIAILLVGFSFLSRPSKEQLDAQQRYYDSIAQVQQREADLKAKSEVAL 58 Query: 56 VLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 ++ S S + ++N + SI KG L+ Y Sbjct: 59 ANEGEKKTVDSTSLFFNARQGADSLITIQNNLVALSICTKGGSIFSATLKEY--MGQDKK 116 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 VTL + + + N + + T ++L +A+ Sbjct: 117 TPVTLFNGDDVSMNFLFY--------NKKETIQTGDYYFNEVDRTDSTVAMRLSADSASY 168 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 I F + D + + + V + + + + + Sbjct: 169 IDFTYAMHNDTYLIDFTIHAVNMEGKLAATNNYVDIEWAQRAHQIEKGYTYENRLSELTY 228 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 K Y K+ E W+ +++++SVF+ + + + Y Sbjct: 229 KKMGEGTDYLSANKNDEKEIPEHLDWIAFKNQFFSSVFLADADFEKTKLVSKMEPQGSGY 288 Query: 286 QAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWGWFY 340 +SA T P T + + G + T+ +K + R L Sbjct: 289 IKDYSAEMSTKFDPTGKEATQLYFYFGPNHYKTLTALDKGREEKWELNRLVYLGWPIVRQ 348 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + GI ++L T+ VK++ FP K Y+S+A M+ ++PKIDE+ Sbjct: 349 INQWFTINIFDWLSGWGLGMGIVLLLMTLIVKVVVFPATWKTYMSSAKMRVLKPKIDEIN 408 Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +K+ + Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R + Sbjct: 409 KKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS-F 467 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQ 516 W DL+ D +PF H+ ++ ++M+++ + K D Q Sbjct: 468 LWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKYMMQQQDTGANPQ 522 Query: 517 AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + WM PV+F+F L+ +P+GL Y+ S +IS+V +IM+ E L+ +L S Sbjct: 523 MAAMKWMSYLMPVMFLFILNDYPSGLNYYYFISTLISVV-TTIIMRKTTNEEKLLAQLES 581 Query: 573 T 573 Sbjct: 582 N 582 >gi|188996900|ref|YP_001931151.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931967|gb|ACD66597.1| 60 kDa inner membrane insertion protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 515 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 118/571 (20%), Positives = 230/571 (40%), Gaps = 70/571 (12%) Query: 2 ERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQP-NQVDNSYAAV 56 + + + +++ ++ Q F+ + N ++ + V P Q+ SY V Sbjct: 5 DMQKRFMIFFGAVALLLISFSLISQYFFKDSTQNQKNQTQQTQREVAAPIKQISGSYDLV 64 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 L +R ++ V +K + G + Y++D+ S SN Sbjct: 65 LTGERVNTDNLKDLVRIKTKEGYIEFSNIGGRIVSAFDNRYNVDIIPE------FSKSNK 118 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 ++T + S L + N+ E+T ++++ Sbjct: 119 VFPGEIITTDINTTKLLNF----------SKYESKIQDNKILFYLKNENVEVEKTYTIND 168 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + + + + E + Sbjct: 169 DNTITVDIKTKGLENVGLAYLTGITLKSEGTFGHNGPIIK-----------TDKEIIKIN 217 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + ++I + W G +KY+ + + Y + + + Sbjct: 218 NDINTIQTIRDKILWAGQENKYFMQIL------------SIKGGINTVYIVPVAKDTTVV 265 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP-----RFEMLIDWGWFYFIAKPMFMLMS 351 L + F + G K + + +D+G+F + KP+F+L+ Sbjct: 266 LSEIPASFEGFNYLGPKLYSLLGEITDKYQKLWNVDLNLRSSVDFGFFGILGKPLFLLLH 325 Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + Y+ V N+G+AI++ TV ++L+ FPL K + M ++ P++++L++K+ + PQ L Sbjct: 326 FIYDFVHNWGLAIIVLTVLLRLVLFPLNHKSLKAMKKMADLAPEMEKLKKKYAK-DPQKL 384 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 Q+ +++LY NP++GC PIL QIP+F A+Y V+ +++E+++APF WIKDL+ DP Sbjct: 385 QEEIMKLYAEAGANPMSGCLPILAQIPIFIALYNVLMVTVELKNAPFMLWIKDLSDKDPY 444 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL 531 + PI+M LSM Q ++P DK Q MI+ M VF F Sbjct: 445 Y-------------------VLPILMGLSMVAQQFITPSS-DKNQRMIMYIMAGVFTFMF 484 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +FP+GL++YW +N++ ++Q +I K Sbjct: 485 MNFPSGLVLYWLTNNILGLIQSVIINKSMKK 515 >gi|320536044|ref|ZP_08036102.1| membrane protein insertase, YidC/Oxa1 family protein [Treponema phagedenis F0421] gi|320147094|gb|EFW38652.1| membrane protein insertase, YidC/Oxa1 family protein [Treponema phagedenis F0421] Length = 609 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 130/615 (21%), Positives = 248/615 (40%), Gaps = 45/615 (7%) Query: 4 NWNYFVAIALSVIIVYAWQNF----YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI- 58 N +AI LS +++ Y P EE + N++ A Sbjct: 2 KKNTLIAIILSTLVIIGSTYLQLKLYPPPAQEEQQPAQSEKSVQSTETVPQNTFVAETEL 61 Query: 59 -------------DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 D +K + S KG L ++ S Sbjct: 62 GSKSAGGVEFLSNPDSDDQNLTEKIYTVKTSLVEASFTNKGGDIISYKLLEHYGA-DSTE 120 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 + + + + + A+ L + +L + + + I + ++A+ Sbjct: 121 NVEMIKNLTESNRAFSIALGNQTAPIVDQLFHVKEEKLSGGAQAIGFYKTISIRNQDASI 180 Query: 166 ILF---ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG---VQEG 219 F +R I ++Y+F++ ++ + + P + E Sbjct: 181 SSFILAKRYIFYPDNYMFELQVSINGDESLKGLNFNSAGYTLKTPPQIGPDWNTADKYEY 240 Query: 220 FIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK-YL 278 + K + K ++ S+ + W+ IS KY+ ++ IP + S F Sbjct: 241 RTFMSFSKEKEKTKSYTLKTDSVQEITDPVGWVSISGKYFTTIVIPQDSNTIQSTFLLAP 300 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + + Q A I+ G +I ++ G + Y P I Sbjct: 301 KNAQSPIQDNQIALIRKIIAGSAIIDIYHVYIGPCTENYLSPYNIPSKNPFQLDNIRIDS 360 Query: 339 F-------YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 Y + + ++ +FY ++ N+G+AI+L T+ +KLLF+PL KK +V++ M+ Sbjct: 361 VAASGGLLYPLEVGLKWVLQFFYKIIPNWGVAIILVTLLIKLLFYPLTKKSFVASQRMQE 420 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP++ ++ K+K +P Q L + M + YK NPL+GC +L+Q+P FA+Y++ + Sbjct: 421 LQPQMQTIQAKYKNNP-QKLNEEMAKFYKEAGYNPLSGCLTLLVQMPFLFAMYRLFNNYF 479 Query: 452 EMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E R A F WI DL+ D +I+ L +PF+ G+ + + PI+ +S + K++ P Sbjct: 480 EFRGAMFIPHWIPDLSIGD--SIWKLPFTVPFF--GWTDLRLLPILYVVSQIVFSKITQP 535 Query: 511 PADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 PA + Q M+L +MPV F F + P+GL++YW+ N++++VQQ I Sbjct: 536 PATEQQNSSMKMMLYFMPVFFFFLFYNAPSGLLVYWTAMNLMTLVQQLFI--KQTMHHTS 593 Query: 567 IDRLRSTFSKNYNSQ 581 + + ++ Sbjct: 594 DAKNKKEVKYGKGAK 608 >gi|225873712|ref|YP_002755171.1| membrane protein [Acidobacterium capsulatum ATCC 51196] gi|225792406|gb|ACO32496.1| membrane protein [Acidobacterium capsulatum ATCC 51196] Length = 605 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 109/585 (18%), Positives = 217/585 (37%), Gaps = 55/585 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP-----------NQVDN 51 + + + + I Q F N + K Q + Sbjct: 15 DSRTLLIYAVIFLAIFLGLQYFRSKNAPPAPPNGKHTPAAQKNSPAPSAAPASAPGQTAS 74 Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A A + +++P + +G L+ Y + + + ++ Sbjct: 75 GNAPAAATTPAVLAAAETTTTVESPLYRVTFTNRGGVAKSWILKKY--TNDAQNRPLDMV 132 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + + + L + + + ++ + + + + + E+T Sbjct: 133 NDKAAQQ-FGYPLSLYTYDAALTQQLNQAMYVPSATGTIQAPATLTFRYSANG-LTVEKT 190 Query: 172 ISLDEHYLFKIVDTVTNNSI--DQIRFSPRGRIMRHKPQTATNTFGVQEGFI--AVLGDK 227 ++ Y+ + VT N + P G + N QE Sbjct: 191 FRFEKSYVLETDVKVTRNGAPVTALLAWPSGFGDQETLPQYQNAQIDQETGAKTGFHLAG 250 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 ++ + S + G+SD Y+AS+F+P + + + R A Sbjct: 251 GPNVKQIEPKKVSGGDTVQGPLDYAGVSDLYFASIFLPPNPDNALMVTLHHALELPRDPA 310 Query: 288 KFSANEITILP-------GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 +++ +P + + LF G K + E ++ +G++ Sbjct: 311 HPKTSKMDQVPVLGAAVGSTTGEVHDRLFVGPKALDVLKSIHTAYHF-NLEGIVHYGFWG 369 Query: 341 FIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +IAKPMF+++ +F+N + N+G AI+L T+ + P + M IQP++D + Sbjct: 370 WIAKPMFLVLQFFHNHGIPNWGWAILLLTLILNAAMMPTRVTMMKKSLAMMRIQPQMDAI 429 Query: 400 REKF-----KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 + K+ Q + K M+ L K IN AGC P+LLQ P+ Y+++ +++ +R Sbjct: 430 KAKYAKYKATDPRKQEMNKEMMDLQKREGINMFAGCLPMLLQYPLLIGFYRMLEVTIALR 489 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-D 513 HA + W+ DL+A DP I PI + +SMF+ +P P D Sbjct: 490 HAHWM-WLPDLSAPDPYY-------------------ILPIFVVVSMFLVQFFTPSPGVD 529 Query: 514 KGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q ++ + MP F F + +G+ +YW+ N++ + QQ V+ Sbjct: 530 PAQQRMMAFMMPAFFGFMMLHIGSGVALYWAGGNILGVGQQWVMN 574 >gi|313205343|ref|YP_004044000.1| protein translocase subunit yidc [Paludibacter propionicigenes WB4] gi|312444659|gb|ADQ81015.1| protein translocase subunit yidC [Paludibacter propionicigenes WB4] Length = 632 Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats. Identities = 120/614 (19%), Positives = 241/614 (39%), Gaps = 42/614 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE---------RKNIQTVKQPNQVDN 51 M+ N L +IV + E + +++ V + Sbjct: 1 MD--KNTIFGFVLIAVIVLGYMQITKPSEKEIAAQKRYNDSIALVQQSKAHVAVKTISET 58 Query: 52 SYAAVLIDDRAQALS-----------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 +V +D L+N + ++ KG + + L+ Y Sbjct: 59 VSDSVAANDTTNNSGAFGDFSVASKGEEKFYTLENELVKITLGSKGGRIYSVQLKKYSKR 118 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 S N+ +L N F + + N V + T ++L Sbjct: 119 DSLNNAHPLILFKEKDSNLGFTFVTNNNRVINSSNLYFEPVSGITKDAKGNQTLILRLKT 178 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 I F T+ +++ L + N+I + K ++ + Sbjct: 179 TGQAYIDFAYTLPANDYMLGFGIKAKDMNTIMPTGTNSLDMAWTSKIPQQEKGRKFEDRY 238 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 ++ + + K+ W+ D++++S+ I ++ + + L Sbjct: 239 SSIEYKYVADDVEKLSESKNDEKKLTNKVKWIAFKDQFFSSILIANEALNSTTLKSTLEG 298 Query: 281 GHARYQAKFSANE-ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 ++ Y + AN + P + TT + G + T+ Y+KD L Sbjct: 299 ENSGYLKTYDANMSVAFDPTGKVPTTFRWYFGPNHYKTLTAYDKDAKDGHELTLNKLIPL 358 Query: 340 YFIAKP------MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + + + ++F + NFG+ I+L T+ +KL+ FPL K Y+S+A M+ ++ Sbjct: 359 GWGIFGWVNRFAIIPMFNFFNKFISNFGLIILLLTLVIKLVLFPLTYKSYMSSAKMRVLK 418 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P+IDE+ + P QKA ++LY ++P++GC P LLQ+P+ FA++ ++E+ Sbjct: 419 PEIDEINARIPADKPAERQKATMELYGKVGVSPMSGCIPSLLQMPILFAMFSFFPAAIEL 478 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 R + W DL+A D +I TL +PF HV ++ ++M+ + + K++ Sbjct: 479 RQQS-FLWATDLSAYD--SIMTLPFTVPFGFGN--HVSLFCLLMTATNIVYTKLNMANQS 533 Query: 511 ----PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 P ++ MPV+F+F +++ +GL Y+ + +ISI+Q VI + E + Sbjct: 534 TTDQPGGAVMKWMMYLMPVMFLFIFNNYASGLSYYYFIATLISIIQTYVI-RGFVDEKKI 592 Query: 567 IDRLRSTFSKNYNS 580 + +L + + N Sbjct: 593 LAQLHAKRASNSKK 606 >gi|329961447|ref|ZP_08299552.1| membrane protein insertase, YidC/Oxa1 family domain protein [Bacteroides fluxus YIT 12057] gi|328531795|gb|EGF58621.1| membrane protein insertase, YidC/Oxa1 family domain protein [Bacteroides fluxus YIT 12057] Length = 616 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 108/602 (17%), Positives = 225/602 (37%), Gaps = 49/602 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + L I++ + F P E++ +++ ++ Q Q + + A Sbjct: 1 MD--KNTITGLVLIAILLVGFS-FLSRPSQEQLEAQQRYYDSIAQVQQREEALKAKSEAA 57 Query: 61 RAQALSM----------------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A + V ++N ++ KG + L+ Y Sbjct: 58 LANEKETGVVDSTALFFEARKGTASLVTIQNNLAEIKVDTKGGRIASATLKEY--MGQDK 115 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 + VTL S + + N + + T ++L +A+ Sbjct: 116 TTPVTLFSGDDASMNFLFY--------NKKETIQTEDLYFTAVNRTDSTVTMRLSADSAS 167 Query: 165 NILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 I F T+ D + + + V + + + + + + Sbjct: 168 YIDFTYTMHNDTYLVDFTIRAVNMEGKLAATNNYVDIEWAQRARQIEKGYTYENRLSELT 227 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 + Y + W+ +++++SVF+ + + + Sbjct: 228 YKMTGEGTDYLSANNNDEKEISGRLDWIAFKNQFFSSVFLADADFEKAKIASKMEPQGSG 287 Query: 285 YQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGWF 339 Y +SA T P T F + G + T+ ++ + R L Sbjct: 288 YIKDYSAEMSTRFDPTGKEATQLFFYFGPNHYKTLTALDKGRDEKWELNRLVYLGWPVVR 347 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + + GI ++L T+ VK + FP K Y+S+A M+ ++PKIDE+ Sbjct: 348 QINQWFTINIFDWLSGWGLGMGIVLLLMTLIVKAVVFPATWKTYMSSAKMRVLKPKIDEI 407 Query: 400 REKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +K+ + Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R Sbjct: 408 NKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS- 466 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KG 515 + W DL+ D +PF H+ ++ ++M+++ + K D Sbjct: 467 FLWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKYMMQQQDTGANP 521 Query: 516 QAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 Q + WM P++F+F L+ +P+GL Y+ S +IS+V +IM+ E L+ +L Sbjct: 522 QMAAMKWMSYLMPIMFLFVLNDYPSGLNYYYFISTLISVV-TTLIMRKTTNEEQLLAQLE 580 Query: 572 ST 573 + Sbjct: 581 AN 582 >gi|313681706|ref|YP_004059444.1| protein translocase subunit yidc [Sulfuricurvum kujiense DSM 16994] gi|313154566|gb|ADR33244.1| protein translocase subunit yidC [Sulfuricurvum kujiense DSM 16994] Length = 536 Score = 220 bits (560), Expect = 5e-55, Method: Composition-based stats. Identities = 124/562 (22%), Positives = 226/562 (40%), Gaps = 58/562 (10%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N VA+ALS I + + N + Q + S + D ++ Sbjct: 8 NQRLLVAVALSFIFFIGYTTIFPPKASNLEANTTNTAVSTVAAAQPETSAKEAVTDTQSA 67 Query: 64 ALSMSPRVE----LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + + + + I+ G + + L + + L+S K Sbjct: 68 SEVQTTATDTLTTVNSKEFTLKIDTLG-RISSVILSN-KKHNGKDGKLAELVSSVGAKPL 125 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 Y D A + P S+ + N+ G+ + + +T++ Sbjct: 126 YIRFADEALNAAASKTPYSSDLNNITLGENGKAVVTLTQNLPE---LTVTKTLTFYTDGH 182 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + ++N + +++ + + DK + + Sbjct: 183 YDAKIALSNEKRYFVYLGQHPQVIEQMMTVVGGMIYSGDNLTTIFEDKDVEGRS------ 236 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + D+Y+AS+ + + + Y Sbjct: 237 -----IFTDVHFASSFDQYYASIIYGFSKETQVYVDRDAQSNPVTYLEG----------- 280 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + T + G KE T+ P I++GWF F+A P+F ++ + + L+GN Sbjct: 281 -TNNFTFNGYIGPKEHKTLEAIN-----PVLTNAIEYGWFTFVAAPIFKILMWLHGLLGN 334 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G +I+ T+ +++ +PL K VS +K I P+I E++EK+K P + A++++Y Sbjct: 335 WGWSIIALTIIIRIFLYPLTHKGMVSMQKIKEIAPRIKEVQEKYKGDPA-RMNAAVMEMY 393 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K H NPL GC P+LLQIPVFFAIY+V+ ++E++ A + W+ DL+ DP Sbjct: 394 KKHGANPLGGCLPLLLQIPVFFAIYRVLLNAVELQGAEWVMWVHDLSRMDPYY------- 446 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538 I PI+M +M+ Q K++P D Q I ++PV+F F +FPAGL Sbjct: 447 ------------ILPILMGATMYYQQKITPSNFTDPLQEKIFKFLPVIFTFFFFTFPAGL 494 Query: 539 IIYWSWSNVISIVQQAVIMKMH 560 ++YW +N+ SI QQ ++ K Sbjct: 495 VLYWFVNNIFSIAQQYLVNKQF 516 >gi|89891424|ref|ZP_01202930.1| 60 Kd inner-membrane protein [Flavobacteria bacterium BBFL7] gi|89516455|gb|EAS19116.1| 60 Kd inner-membrane protein [Flavobacteria bacterium BBFL7] Length = 610 Score = 220 bits (559), Expect = 6e-55, Method: Composition-based stats. Identities = 115/585 (19%), Positives = 222/585 (37%), Gaps = 38/585 (6%) Query: 1 MERN---WNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53 ME+ W V + L II+ W Q T Q +N Sbjct: 1 MEQKSIDWKSIVGMGLIFIILMYWFSQNQADVEANPETTTETSAATQDTTPQLTS-NNEP 59 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 AA I + + + +N + I+ KGA + L+ Y +S V L P Sbjct: 60 AAAPISNGVFQAGSNEVITFENDLIQFKIDSKGALIQEALLKSYKT---YDSLPVYLAKP 116 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + + +LD V N+ ++ + S + + + E Sbjct: 117 NEKDH----QLDLVFVTNDGRKMHTKDMSFTPSQSMNGENKVLSFKANVGPSQFLEFRYE 172 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 L + + ++ + E + + Sbjct: 173 LQPKNYMMDFTIRSQGLSQTFNTADAPQLNWEMLAYKRSKGMDNENRYTEIKFEYGDGSD 232 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK----YLSDGHARYQAKF 289 + + + S++ ++ S+ + D Y KF Sbjct: 233 DYTGQGAEADEEEDKVSYIAYKQHFFTSILLTDTPFKKAKLISENIASQDDEQDTYTKKF 292 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA-IPRFEMLIDWGWFYFIAKPMFM 348 ++ G + + G ++ + YE++L + I F+ +P+F Sbjct: 293 NSQIELEYTGGELAYNMDWYFGPTDYDILDGYERNLDEVVDLGWGIFGWINEFVIRPLFS 352 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ N +GIAI+L T+ V+++ P+ K Y++ A MK ++P+++ + EK+K + Sbjct: 353 LL--TKNAGIPYGIAIILLTICVRIILSPVLYKSYMTQAKMKILRPELNRIAEKYKDNAM 410 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + Q+ +++ +PL+GC P LLQ+PVFFA++K + ++R + W DL++ Sbjct: 411 KK-QQETMRIQSEAGASPLSGCLPGLLQMPVFFALFKFFPTAFDLRQKS-FLWADDLSSY 468 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS--------PPPADKGQAMIL 520 D IF L +PFY HV ++PI+ S+++F M+M+ P I+ Sbjct: 469 D--EIFKLPFNIPFYG---DHVSLFPILASIAIFFYMQMTTGQTMQNTQQPGMPNMKFIM 523 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+ + +++ +GL +Y+ SN+I+I VI K + Sbjct: 524 YLSPLFMLVFFNNYASGLSLYYFVSNLITIGIMLVI-KNFVIKEE 567 >gi|317479120|ref|ZP_07938260.1| YidC/Oxa1 family membrane protein insertase [Bacteroides sp. 4_1_36] gi|316904692|gb|EFV26506.1| YidC/Oxa1 family membrane protein insertase [Bacteroides sp. 4_1_36] Length = 617 Score = 220 bits (559), Expect = 6e-55, Method: Composition-based stats. Identities = 109/603 (18%), Positives = 233/603 (38%), Gaps = 50/603 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 M+ N + L I++ + F P E++ +++ ++ Q Q + Sbjct: 1 MD--KNTITGLVLIAILLVGFS-FLSRPSQEQLEAQQRYYDSIAQVQQREADLKAKAEAA 57 Query: 52 ----SYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 S A +D A + +V ++N +++ KG + L+ Y Sbjct: 58 LANESGAEASVDSTALFFDARQGTNSQVTIQNNLAEITVDTKGGRIASATLKEY--MGQD 115 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 + VTL S ++ + N + + + T ++L + Sbjct: 116 KTTPVTLFSGNDASMNFLFY--------NKKETIQTEDYYFTAVNRTDSTVTMRLSADSN 167 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I F + D + + + V + + + + + + Sbjct: 168 SYIDFTYRMHNDTYLIDFTIQAVNMEGKLAATNNYVDIEWSQRARQIEKGYTYENRLAEL 227 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + Y K+ E W+ +++++SVF+ + + + Sbjct: 228 TYKITGEGTDYLSANKNDEKEVPERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQGS 287 Query: 284 RYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGW 338 Y +SA T P T F + G + T+ ++ + R L Sbjct: 288 GYIKDYSAEMSTKFDPAGKEPTQLFFYFGPNHYKTLTALDKGRDEKWELNRLVYLGWPLI 347 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + + GI ++ T+ VK + FP K Y+S+A M+ ++PKIDE Sbjct: 348 RWINKWFTINIFDWLSSWGLSMGIVLLFMTLIVKAVVFPATWKTYMSSAKMRVLKPKIDE 407 Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + +K+ + Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R Sbjct: 408 INKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---K 514 + W DL+ D +PF H+ ++ ++M+++ + K D Sbjct: 468 -FLWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKYMMQQQDTGAN 521 Query: 515 GQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 Q + WM P++F+F L+ +P+GL Y+ S +IS+V +IM+ E L+ +L Sbjct: 522 PQMAAMKWMSYLMPIMFLFILNDYPSGLNYYYFISTLISVV-TTLIMRKTTNEEALLAQL 580 Query: 571 RST 573 + Sbjct: 581 EAN 583 >gi|167762902|ref|ZP_02435029.1| hypothetical protein BACSTE_01266 [Bacteroides stercoris ATCC 43183] gi|167699242|gb|EDS15821.1| hypothetical protein BACSTE_01266 [Bacteroides stercoris ATCC 43183] Length = 615 Score = 219 bits (558), Expect = 8e-55, Method: Composition-based stats. Identities = 110/609 (18%), Positives = 229/609 (37%), Gaps = 48/609 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER---KNIQTVKQPNQVDNSYAAVL 57 M+ N + L I++ + + + +R Q ++ + A L Sbjct: 1 MD--KNTITGLVLIAILLVGFSFLSRPSKEQLAAQQRYYDSIAQVQQREADLKAKAEAAL 58 Query: 58 IDDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 +D+ + + S +V ++N ++ KG + L+ Y Sbjct: 59 ANDKEEQTADSTALFFNALQGTDSQVTIQNNLAELTVATKGGRISSATLKEY--MGQDKK 116 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 VTL S ++ + N + + T ++L +A+ Sbjct: 117 TPVTLFSGNDASMNFLFY--------NKKETIQTENYYFSVVNRTDSTVTMRLAADSASY 168 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 I F+ + ++ YL + + + + + + Sbjct: 169 IDFKYAMH-NDTYLVDFTIDAVGMANKLANTDYVDIEWSQRARQIEKGYTYENRLAELTY 227 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + Y K+ E W+ +++++SVF+ L + Y Sbjct: 228 KITGDGTDYLSAGKNDEKEVAERLDWIAFKNQFFSSVFLADANFEKTKLNSKLETQGSGY 287 Query: 286 QAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWGWFY 340 +SA T P T F + G + T+ +K + R L + Sbjct: 288 IKDYSAEMSTAFDPTGKTPTQLFFYFGPNHYKTLTALDKGRENKWELNRLVYLGWPLIRW 347 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + + + GI ++L T+ VK + FP K Y+S+A M+ ++PKIDE+ Sbjct: 348 INKWFTINIFDWLSSWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKPKIDEIG 407 Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +K+ + Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R + Sbjct: 408 KKYPKQEDAMKKQQEVMALYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS-F 466 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQ 516 W DL+ D +PF H+ ++ ++M+++ + K D Q Sbjct: 467 LWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKFMMQQQDTGANPQ 521 Query: 517 AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + WM PV+F+F L+ +P+GL Y+ S ++S+V +IM+ E L+ +L + Sbjct: 522 MAAMKWMSYLMPVMFLFILNDYPSGLNYYYFISTLVSVV-TTIIMRKMTNEEALLAQLEA 580 Query: 573 TFSKNYNSQ 581 + Sbjct: 581 NRKDPKKMK 589 >gi|160890337|ref|ZP_02071340.1| hypothetical protein BACUNI_02778 [Bacteroides uniformis ATCC 8492] gi|156860069|gb|EDO53500.1| hypothetical protein BACUNI_02778 [Bacteroides uniformis ATCC 8492] Length = 617 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 108/603 (17%), Positives = 233/603 (38%), Gaps = 50/603 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 M+ N + L I++ + F P E++ +++ ++ Q Q + Sbjct: 1 MD--KNTITGLVLIAILLVGFS-FLSRPSQEQLEAQQRYYDSIAQVQQREADLKAKAEAA 57 Query: 52 ----SYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 S A +D A + +V ++N +++ KG + L+ Y Sbjct: 58 LANESGAEASVDSTALFFDARQGTNSQVTIQNNLAEITVDTKGGRIASATLKEY--MGQD 115 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 + VTL S ++ + N + + + T ++L + Sbjct: 116 KTTPVTLFSGNDASMNFLFY--------NKKETIQTEDYYFTAVNRTDSTVTMRLSADSN 167 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I F + D + + + V + + + + + + Sbjct: 168 SYIDFTYRMHNDTYLIDFTIQAVNMEGKLAATNNYVDIEWSQRARQIEKGYTYENRLAEL 227 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + Y K+ E W+ +++++SVF+ + + + Sbjct: 228 TYKITGEGTDYLSANKNDEKEVPERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQGS 287 Query: 284 RYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGW 338 Y +SA T P T F + G + T+ ++ + R L Sbjct: 288 GYIKDYSAEMSTKFDPAGKEPTQLFFYFGPNHYKTLTALDKGRDEKWELNRLVYLGWPLI 347 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + + GI ++ T+ VK + FP K Y+S+A M+ ++PKIDE Sbjct: 348 RWINKWFTINIFDWLSSWGLSMGIVLLFMTLIVKAVVFPATWKTYMSSAKMRVLKPKIDE 407 Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + +K+ + Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R Sbjct: 408 INKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---K 514 + W DL+ D +PF H+ ++ ++M+++ + K D Sbjct: 468 -FLWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKYMMQQQDTGAN 521 Query: 515 GQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 Q + WM P++F+F L+ +P+GL Y+ S ++S+V +IM+ E L+ +L Sbjct: 522 PQMAAMKWMSYLMPIMFLFILNDYPSGLNYYYFISTLVSVV-TTLIMRKTTNEEALLAQL 580 Query: 571 RST 573 + Sbjct: 581 EAN 583 >gi|146300139|ref|YP_001194730.1| putative inner membrane protein translocase component YidC [Flavobacterium johnsoniae UW101] gi|146154557|gb|ABQ05411.1| protein translocase subunit yidC [Flavobacterium johnsoniae UW101] Length = 636 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 109/627 (17%), Positives = 223/627 (35%), Gaps = 64/627 (10%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME N + L I+ W + P +E+ E+ + V + + A Sbjct: 1 MEEKKLDLNSIIGFVLIFGILI-WIMYQNQPSEKEIAAEKAKKELVAKQEAQAKADKAKT 59 Query: 58 IDDRAQ-------------------------ALSMSPRVELKNPSLIGSINLKGAQFDDL 92 + ++N + I KG + Sbjct: 60 AVAPTAVTPGDTVQLAQLQKTLGGFAYSAALPSAKEAFTTIENEKIKLKIANKGGYIVEA 119 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L+ + ++ +V L+ +N A L+ + N+ ++ + + + Sbjct: 120 TLKEFKKFEKNSGQLVELIKDNN------AHLNIQLQTVDNRTLNTKDLFFEPTLEKIGA 173 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212 + + K N E L + D + + + + Sbjct: 174 DQVLSMRLKAGANEFLEYKYVLKPNDYLVGFDVRSQGLNKVLNSAKPLDLQWDLKTYRNE 233 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 E A + + + + S++ ++ S+ + K Sbjct: 234 KSISYENRYAEIYYEHEDGKINYAGLGKHEEETVDKVSFIAYKQHFFTSILVTDKPFETT 293 Query: 273 ----SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + + +F AN I + G ++ + Y+K+ Sbjct: 294 KLESTNLVNDEKIDTVFTKQFKANVPLAFSNGEIDYKMQWYFGPADYKVLKSYDKNFQKI 353 Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV--KLLFFPLAKKQYVST 386 + + WG F +I K +F+ + F + + I + + KL P+ K ++S Sbjct: 354 ---IPLGWGIFGWINKLIFVPLFGFLSSTIGLSLGIAIIIFTIIIKLAMSPITYKSFLSQ 410 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A MK ++P I EL EKFK+ P + Q+ ++LY +NP+AGC P L+Q+P +A ++ Sbjct: 411 AKMKVLRPDIAELGEKFKKDPMKK-QQETMKLYNKAGVNPMAGCIPALIQLPFMYASFQF 469 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + E+R + W DL++ D ++ L +P Y H+ ++PI+ ++++F MK Sbjct: 470 FPAAFELRQKG-FLWADDLSSFD--SVVKLPFHIPLYG---DHISLFPILAAIAIFFYMK 523 Query: 507 MS---PPPADKGQ------AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M+ A Q A ++ M P++ + +S+ AGL +Y SN+I+I Sbjct: 524 MTSGDQQMAAPQQEGMPDMAKMMKIMIYVSPLMMLIFFNSYGAGLSLYNFISNLITIGIM 583 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNS 580 VI + +++ + Sbjct: 584 FVIKNYIVDSDKIHAQIQENKQREPKK 610 >gi|270296905|ref|ZP_06203104.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270272892|gb|EFA18755.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 617 Score = 219 bits (556), Expect = 2e-54, Method: Composition-based stats. Identities = 108/603 (17%), Positives = 234/603 (38%), Gaps = 50/603 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 M+ N + L I++ + F P E++ +++ ++ Q Q + Sbjct: 1 MD--KNTITGLVLIAILLVGFS-FLSRPSQEQLEAQQRYYDSIAQVQQREADLKAKAEAA 57 Query: 52 ----SYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 S A +D A + +V ++N +++ KG + L+ Y Sbjct: 58 LANESGAEASVDSTALFFDARQGTNSQVTIQNNLAEITVDTKGGRIASATLKEY--MGQD 115 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 + VTL S ++ + N + + + T ++L + Sbjct: 116 KTTPVTLFSGNDASMNFLFY--------NKKETIQTEDYYFTAVNRTDSTVTMRLSADSN 167 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I F ++ D + + + V + + + + + + Sbjct: 168 SYIDFTYSMHNDTYLIDFTIQAVNMEGKLAATNNYVDIEWSQRARQIEKGYTYENRLAEL 227 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + Y K+ E W+ +++++SVF+ + + + Sbjct: 228 TYKIAGEGTDYLSANKNDEKEVPERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQGS 287 Query: 284 RYQAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGW 338 Y +SA T P T F + G + T+ ++ + R L Sbjct: 288 GYIKDYSAEMSTKFDPAGKEPTQLFFYFGPNHYKTLTALDKGRDEKWELNRLVYLGWPLI 347 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + + GI ++ T+ VK + FP K Y+S+A M+ ++PKIDE Sbjct: 348 RWINKWFTINIFDWLSSWGLSMGIVLLFMTLIVKAVVFPATWKTYMSSAKMRVLKPKIDE 407 Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + +K+ + Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R Sbjct: 408 INKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---K 514 + W DL+ D +PF H+ ++ ++M+++ + K D Sbjct: 468 -FLWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKYMMQQQDTGAN 521 Query: 515 GQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 Q + WM P++F+F L+ +P+GL Y+ S ++S+V +IM+ E L+ +L Sbjct: 522 PQMAAMKWMSYLMPIMFLFILNDYPSGLNYYYFISTLVSVV-TTLIMRKTTNEEALLAQL 580 Query: 571 RST 573 + Sbjct: 581 EAN 583 >gi|167751879|ref|ZP_02424006.1| hypothetical protein ALIPUT_00121 [Alistipes putredinis DSM 17216] gi|167660120|gb|EDS04250.1| hypothetical protein ALIPUT_00121 [Alistipes putredinis DSM 17216] Length = 653 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 110/636 (17%), Positives = 235/636 (36%), Gaps = 64/636 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN------ERKNIQTVKQPNQVDNSYA 54 M+ I + +I + + + + + E+ IQ + N+ Sbjct: 1 MD--KKSIAGIVIVALIFLGFTFYNSHQQKKYQEQLMAYNAEQARIQAEQDSLLALNAPL 58 Query: 55 AVLIDDRA---------QALSMSPRV------------------ELKNPSLIGSINLKGA 87 +L R+ ++N L + +G Sbjct: 59 PTADSAAIAAAGERLSGDSLQAQRRIMQFGELLAAAQQAEAEEFTVENEVLKIDFSTRGG 118 Query: 88 QFDDLNLRGYHLDV--SSNSPIVTLLSPSNTKNAYFAELDYVSTA-----NNIELPNSNT 140 Q D+ L+ Y + V L P+ A + + + Sbjct: 119 QVKDVTLKDYTKYAPRDERNQPVRLFDPATANFALTFYVKNGHNNVLVNTADYTFNLVSM 178 Query: 141 VWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRG 200 + + +T P+ + S YL + + N + + G Sbjct: 179 EKDADGAQRITMDLPVARDAVLRYEYVVYNIQSPARDYLVDLNVYLKNMAPQMASQTTIG 238 Query: 201 RIMRHKPQTATNTFGVQEGF--IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKY 258 ++ F + + I + S +W+ ++ Sbjct: 239 IDWSNRSYQNEKGFQNENTYTTIYYRAPGESSADDLGISDGEKQKTVSSSLNWVAFKQQF 298 Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 ++SV I + S+ ++ + Y FSA ++ + G ++ + Sbjct: 299 FSSVMIAPENFSYADMKFTTAEKGSGYIKDFSAKLTVPYTAQTDHYNFAFYFGPNKYAIL 358 Query: 319 HHYEKDLAIPRFEMLI-----DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 H + + + + + + + +FG+ I++ V VK+ Sbjct: 359 KHVATTEGDDELHLERLIPLGWGIFGWVNRWFVIPVFDFLRQFIPSFGLIILILAVLVKV 418 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWP 432 + PL K Y+STA M+ I+P++DEL +K+ + Q+A ++LYK INP+ GC P Sbjct: 419 IISPLTYKSYISTAKMRVIKPEVDELAKKYPRQEDAMKRQQATMELYKKAGINPMGGCIP 478 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+Q+P+ A+++ S+E+R + W DL++ D ++ +L +PFY HV + Sbjct: 479 LLIQMPIIIAMFRFFPASIELRGQ-HFLWADDLSSYD--SVLSLPFNIPFYG---DHVSL 532 Query: 493 WPIIMSLSMF------IQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWS 545 + ++M++++F Q S P G ++ + MPV+ + +S+ +GL Y+ + Sbjct: 533 FALLMTVALFAFSYINYQQTASSQPQMAGMKFMMVYLMPVMMLLWFNSYSSGLTYYYFLA 592 Query: 546 NVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 N+++I Q VI + + + +++ +KN N + Sbjct: 593 NILTIGQTLVI-RRMIDDEKIHAVMQANAAKNKNRK 627 >gi|32265611|ref|NP_859643.1| putative inner membrane protein translocase component YidC [Helicobacter hepaticus ATCC 51449] gi|38502920|sp|Q7VJY0|OXAA_HELHP RecName: Full=Inner membrane protein oxaA gi|32261659|gb|AAP76709.1| conserved hypothetical membrane protein [Helicobacter hepaticus ATCC 51449] Length = 591 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 125/597 (20%), Positives = 226/597 (37%), Gaps = 76/597 (12%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS------------- 52 +AI LS+ + F+ + + T + S Sbjct: 15 RVLIAIGLSIAFFAIYAYFFPQKPHQNTHQAHTAQNTQDTQESIQASTHTEINTQVAPHQ 74 Query: 53 ----------YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 +L + + + I+ G + + L+ Sbjct: 75 NIQDSTQSVQNEISSSAQMPHSLKQTIIARVDSDEFELEIDALG-RIKQVYLKDEKFIRH 133 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTA-NNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 + + ++ E + +L ++ S TP Sbjct: 134 EQTSLFAMIGEVLGMKPAHKEKRDKLPLFGDSQLHTMEMRFSDTSINQQAFDTPYTANIS 193 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSID---------QIRFSPRGRIMRHKPQTATN 212 I L ++ ++ + +P T+ Sbjct: 194 YIKLENAPVEIVLTQNLGNLVIKKYLTIHPNLAYDVRLELSKPNIEYFVSNGMRPTADTD 253 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKS---SISNFHESNSWLGISDKYWASVFIPSKET 269 T+ + D L + + D + S+S++ D+Y+ S+F + Sbjct: 254 TYAFRGVITRNNIDGVLTKFEDGDASSDYLAKNAADIRSSSFVASVDRYYTSLFFSNAPK 313 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + + + +F + + G KE+ + E Sbjct: 314 GLYVVMSGDNAHNPMPYVRFEGDA-----------EFAGYIGPKEYHELQGIENT----- 357 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 ++++G F AKP+F+L+ Y Y+L GN+G AI+L T+ V+++ +PL K VS + Sbjct: 358 LTDVVEYGRITFFAKPLFLLLEYLYDLCGNWGWAIVLLTLIVRIVLYPLTYKGMVSMQKL 417 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K++ PK+ +L+ ++K PQ LQ M+ LYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 418 KDLAPKMKDLQTRYKD-DPQKLQIHMMDLYKKHGANPLGGCLPLILQIPVFFAIYRVLHN 476 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 ++E++ + + WI DL+A DP + P++M +SM+I K++P Sbjct: 477 AVELKSSAWILWITDLSAIDPYF-------------------VLPVLMGVSMYISQKLTP 517 Query: 510 PP-ADKGQAMILNWMPVV--FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D Q I +P V F + FPAGL++YW+ +NV SI+QQ I K+ + Sbjct: 518 SNFTDPMQEKIFKMLPWVFTIFFIIFPFPAGLVLYWTINNVFSIIQQISINKIMEGK 574 >gi|325285135|ref|YP_004260925.1| Membrane protein oxaA [Cellulophaga lytica DSM 7489] gi|324320589|gb|ADY28054.1| Membrane protein oxaA [Cellulophaga lytica DSM 7489] Length = 615 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 122/605 (20%), Positives = 226/605 (37%), Gaps = 56/605 (9%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME + L + W P EE+ ++K Q + + Sbjct: 1 MEEKKFDAKTLIGFLLIFGLFVLW-FNTTQPTAEELEAQKKEQQKTEAATVDNKQEKETT 59 Query: 58 IDDRAQALSMSPRV--------------------ELKNPSLIGSINLKGAQFDDLNLRGY 97 + LS S V L+N L I+ KG Q + ++ + Sbjct: 60 AQEPVLNLSDSTAVANYKSKIGAFGYTPALEGTTVLENNVLYLRISNKGGQIVEAKMKNF 119 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 V+ +S V L+ +N A + ++ + ++ ++ S T + Sbjct: 120 ---VTYDSLPVHLVKDNN------ASFGLTFSTSDNRVLDTKDLYFEPSISKNGNNTVLS 170 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + K + E + + + + + ++ + + Sbjct: 171 MKAKVSATDFLEYRYEIKPDEYLLDFNIRSQGLNGVLNSAAPIALVWKQKGIRHSKSATY 230 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 E L E S WL +++S+ K Sbjct: 231 ENRYTRLTYNHDDGNISKLSESSDDEEEEVDVKWLSYRQHFFSSILATDKHFETAKLSSV 290 Query: 278 LSDGHARYQAKFSANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + KF+ +LP ++ L+ G + + Y++ E Sbjct: 291 NLVEDDTPETKFTKENTAVLPLKADAGELSYNMNLYYGPTDIKELSKYKEL----GLEDS 346 Query: 334 IDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 I +GW F ++ + L +GIAI++ T+ V+LL P+ K Y+S A MK Sbjct: 347 IPYGWGIFGFINRYVFTPAYTFLSSFLPYGIAIIVMTILVRLLMSPVTYKSYLSQAKMKV 406 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++P+I EL EK+K +P + Q+ ++LY +P++GC P LLQ+PVF+A++ S Sbjct: 407 LKPEIAELGEKYKDNPMKK-QQETMKLYNKAGASPMSGCLPALLQLPVFYALFMFFPTSF 465 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS--- 508 +R P + W DL++ D I L +P Y HV ++PI+ S+++F M M+ Sbjct: 466 ALRQKP-FLWADDLSSYD--IIAELPFHIPLYG---DHVSLFPILASIAIFFYMMMTSGQ 519 Query: 509 ---PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P IL P++ + +S+ +GL +Y+ SN+I+I I K E Sbjct: 520 NMQQQPGMPNMKFILYLSPLMMLIFFNSYASGLSLYYFVSNLITIFIMLAIKKFIIDEDK 579 Query: 566 LIDRL 570 + ++ Sbjct: 580 IHAKI 584 >gi|153806660|ref|ZP_01959328.1| hypothetical protein BACCAC_00930 [Bacteroides caccae ATCC 43185] gi|149131337|gb|EDM22543.1| hypothetical protein BACCAC_00930 [Bacteroides caccae ATCC 43185] Length = 617 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 107/612 (17%), Positives = 234/612 (38%), Gaps = 52/612 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK----NIQTVKQPNQVDNSYAAV 56 M+ N + L I++ + F P E++ ++K +Q + A Sbjct: 1 MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKKYYDSIALVQQQEEALKAKTEAA 57 Query: 57 LIDDRAQALSMSP--------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 L +++ +A + + ++ ++N + KG + L+ Y + Sbjct: 58 LANNKKEAATTADSSALFFNAMHGTDSKISIQNNVAEITFATKGGRVYSATLKEY-MAQD 116 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 +PIV + N F + + + + + ++L + Sbjct: 117 KKTPIVLFDGDDASMNFNFYNKEGAIQTKD---------YFFEAVNKTDSSVTMRLAADS 167 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 A+ I F T+ + YL T + + + + F + Sbjct: 168 ASYIDFIYTLK-PDSYLMNFEIKATGMADKLASTNYVDIDWSQRARQLEKGFTYENRLSE 226 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + + K W+ +++++SVFI ++ S + Sbjct: 227 LTYKVTGDDVDNLSAAKDDSQELQGHIDWVAFKNQFFSSVFIAEQDFDKVSVKSRMEQQG 286 Query: 283 ARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWG 337 + Y +SA T P T + G F T+ +K + R L Sbjct: 287 SGYIKDYSAEMNTFFDPSGKEPTEMHFYFGPNHFKTLKALDKGRTEKWELHRLVYLGWPL 346 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + + + GI +++ T+ VK++ +P K Y+S+A M+ ++PKID Sbjct: 347 IRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKID 406 Query: 398 ELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E+ +K+ + Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R Sbjct: 407 EINKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQ 466 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--- 513 + W DL+ D T +PF H+ ++ ++M+++ + K + D Sbjct: 467 S-FLWADDLSTYD--AFITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMSMQDTGA 520 Query: 514 ----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ E L+ Sbjct: 521 QPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRKTTNETKLLAI 579 Query: 570 LRSTFSKNYNSQ 581 L + + Sbjct: 580 LEANKKDPKQMK 591 >gi|325969856|ref|YP_004246047.1| membrane protein oxaA [Spirochaeta sp. Buddy] gi|324025094|gb|ADY11853.1| Membrane protein oxaA [Spirochaeta sp. Buddy] Length = 604 Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats. Identities = 128/595 (21%), Positives = 228/595 (38%), Gaps = 44/595 (7%) Query: 1 MERNWNYFVAIALSVIIV-----YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 M+ N +AI LSV+++ F P ++ E + T Y+ Sbjct: 1 MD--KNTILAIVLSVLVITVGMTIQTTFFAPDPVVQSSQQEVQQASTPSATTLEPAQYSQ 58 Query: 56 VLIDDRAQALSMSPRV-----------ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 + + + V I N GA L+ + + Sbjct: 59 IPSNMAWNSKLPGSLVSVGNQGSSTPFTFSTEYFIIEFNPNGASVSSFKLKEHL----DD 114 Query: 105 SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 V LL S N F AN I+ + + + Sbjct: 115 GEPVELLFKSQNSNDAFLLYAGKDKANPIDANFRYQISGNKVIFTQEFALLSEDGKSVGD 174 Query: 165 NILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + +T + + YLF+I N+ + S + + Sbjct: 175 SFSLTKTYTFGAKDYLFQIDVDTKNSVNKAVPLSFENSAYTLAFEPQIGPSFAKLDNNYN 234 Query: 224 LGDKSLVEQKYSDIEKSSISN----FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS 279 + E S + +SN + SW+ + KY++ + IP S + Sbjct: 235 YRRFYIKEDGSSKKNQVKLSNGAYTTTKPLSWVALVGKYFSLIAIPDATNYTVSLSETSE 294 Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW--- 336 +G + + ++ T + K TI+ + + ++ Sbjct: 295 EGLPLQSSIYITRPAIRSASQTDTFRFYAGPQLKGDMTIYDDASSNSFGVANLQLEQALD 354 Query: 337 --GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ + +++ Y ++ N+G+ I++ T +KL+ +P++KK STA M ++ P Sbjct: 355 SSSWLGWLETILKTILNLLYKVIPNYGVGIIILTFLLKLVLYPISKKGMESTAKMSSLSP 414 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 K+ E++EK+ +P + + M LYK INP+ GC P+LLQ P+ A Y +++ E+R Sbjct: 415 KMAEIKEKYPDNPTK-QNEEMATLYKKEKINPMGGCLPMLLQFPILIAFYGLLNKHFELR 473 Query: 455 HAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPA 512 A F GWI DL+ D +FT LPF + + PI+ ++SM MK++ Sbjct: 474 GAMFIPGWIPDLSMPD--TVFTFGFNLPFLGNQ---LHLLPIVYTVSMIYSMKITQNAST 528 Query: 513 DKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q ++ + MP++F F L + P+GLI+YWS N +SI QQ K E Sbjct: 529 AGSQQGMMKFMTYGMPLMFFFVLYNAPSGLILYWSVMNALSIFQQLYTNKKKSKE 583 >gi|320109423|ref|YP_004185013.1| membrane protein insertase, YidC/Oxa1 family [Terriglobus saanensis SP1PR4] gi|319927944|gb|ADV85019.1| membrane protein insertase, YidC/Oxa1 family [Terriglobus saanensis SP1PR4] Length = 597 Score = 217 bits (551), Expect = 6e-54, Method: Composition-based stats. Identities = 104/589 (17%), Positives = 205/589 (34%), Gaps = 67/589 (11%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-------------PNQV 49 + V + L ++ Q FY + + QT +Q Sbjct: 15 DMKSMLVPMLLIAGVLGGLQ-FYRSKHTQPLQAPSAQTQTAQQPSAVAPAAPGAAPQTTA 73 Query: 50 DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 + + ++N +GA+ L+ Y + +V Sbjct: 74 QTATVGATQAAPVVTAAAEQTTTIENELYRIEFTNRGAEVKSWILKRYKDNKGVPLDLVH 133 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 + + A L + + + ++ LT + + Sbjct: 134 ----AGAAREFGAPLSLYTYDSGLTAQLRQALYVPSVTGKLTAPQTLSFTYSANGLD-VT 188 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 +T DE YL + + P ++ + + Sbjct: 189 KTFRFDESYLLHADVVASRDGS------PVRALIAWPGGFGDQDQVLDYNGSQLESSSEG 242 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLS---------- 279 + + S ++G+ D+++ +VFIP + + + + Sbjct: 243 KTDHVNFAKVSGGKTLDGPLDYVGVVDQFFGAVFIPDNPQTATAVSLHQTIDVEKLKRST 302 Query: 280 ---DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 + T L S T ++AG K + +H ++D+ Sbjct: 303 AITSTTPTGKIATVPIIGTALGDVSGHTQARIYAGPKSYTILHTVSTTGG-ETLAPIVDF 361 Query: 337 GWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 G+F + KP+F + + V N+G AI++ T+ + L+ PL S M+ +QP+ Sbjct: 362 GFFGIVGKPLFFALHFVQEHVASNWGWAIVVFTILINLVLLPLRILSMKSALKMQRLQPQ 421 Query: 396 IDELRE-----KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +D ++ K + ++QL K + +N GC P L+Q+P+ A++ ++ Sbjct: 422 MDAIKARYAKYKVTDPKRADMNAEIMQLQKDNGVNMFGGCIPTLIQLPLLIAMFSMLQKV 481 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E+R A ++ W+ DL AADP + I PI+M +S F+ P Sbjct: 482 VELRQAHWF-WLHDLTAADPYH-------------------ILPIVMVVSQFLVQFYMPS 521 Query: 511 PA-DKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P D Q ++ +M P + ++ +GL +YW N+I IVQQ V+ Sbjct: 522 PGVDPQQQKMMAFMMPAFSGYMTWNYSSGLALYWCIGNLIMIVQQYVMN 570 >gi|91215968|ref|ZP_01252937.1| putative inner membrane protein translocase component YidC [Psychroflexus torquis ATCC 700755] gi|91185945|gb|EAS72319.1| putative inner membrane protein translocase component YidC [Psychroflexus torquis ATCC 700755] Length = 636 Score = 216 bits (550), Expect = 7e-54, Method: Composition-based stats. Identities = 103/600 (17%), Positives = 212/600 (35%), Gaps = 59/600 (9%) Query: 1 MERNW----NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 ME N + AL +I+ I + ++T + V S Sbjct: 1 MEEKKTFDKNSIIGFALIGLILIGVMYMNPNEDIVPEQDNTDQVETNTSTDPVSTSKQTP 60 Query: 57 ----------------------------LIDDRAQALSMSPRVELKNPSLIGSINLKGAQ 88 ++N + I+ KG Q Sbjct: 61 KRSQENGIASNLQDSVNSELARRDYGAFAYSALQDFAKDDAVTTIENEVIKLEISNKGGQ 120 Query: 89 FDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK 148 + ++ Y V L+ N A + N+ + N++ ++ + Sbjct: 121 IVEAKMKQYDTYKG---NPVYLIKDGN------ANFNIEFETNDGRVINTSDLYFEPNLT 171 Query: 149 ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208 + + K ++ E L+ + + ++ + S + + Sbjct: 172 TENGNQVLTMRAKVSDLEFLEFYYGLESEDYMM-NFRIRSQGLNSVISSDQANLSWKVKV 230 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 E + E+ + ES W+ ++ SV + Sbjct: 231 LRKAKSISYENRYTEIVYLYEDEKDDYTGQGDEAVEEDESIDWIAFKQHFFTSVLLTDTP 290 Query: 269 TS----FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 + F A L + T + G +F + Y + Sbjct: 291 FEKGKMTSLNLVQDEQIDTVFTKNFLAEVPLKLNNGEFSETMNWYHGPSDFDVLSSY--E 348 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 + L + + + + + ++G+AI++ T+ V+++ P+ K YV Sbjct: 349 RKLDEIVPLGWGLFGWINRYIFIPFFGFLSSSLPSYGLAIIVMTIVVRIVLSPITYKSYV 408 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S A MK ++P+I+E+ EKFK + + Q+ ++LY ++PLAGC P LLQIPVF+A++ Sbjct: 409 SQAKMKVLKPEINEINEKFKDNAMKK-QQETMKLYSKTGVSPLAGCIPALLQIPVFYALF 467 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + ++R + W DL++ D + + L HV ++PI+ S+++F Sbjct: 468 QFFPSAFDLRQKG-FLWADDLSSYDVIFEWDAYIPL-VSFAYGNHVSLFPILASIAIFFY 525 Query: 505 MKMS--------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +M+ P +I+ + P + + +++ +GL +Y+ SN+I+I VI Sbjct: 526 TQMTAGQNMQQSSQPGMPNMKVIMYFAPFIMLIFFNNYASGLSLYYFISNLITIGIMLVI 585 >gi|330996282|ref|ZP_08320167.1| membrane protein insertase, YidC/Oxa1 family domain protein [Paraprevotella xylaniphila YIT 11841] gi|329573474|gb|EGG55081.1| membrane protein insertase, YidC/Oxa1 family domain protein [Paraprevotella xylaniphila YIT 11841] Length = 629 Score = 216 bits (550), Expect = 7e-54, Method: Composition-based stats. Identities = 104/615 (16%), Positives = 219/615 (35%), Gaps = 56/615 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN--ERKNIQTVKQPNQVDNSYAAVLI 58 M+ N L ++ + F E + +Q Q+ Sbjct: 1 MD--KNTLTGFILIAAVLIGFSYFSRPSEAEMEAQRRQDSIATVAQQKAQMAQEAKEKAE 58 Query: 59 DDRAQALS-------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 ++ + V L+N + + N +G + L+ Y Sbjct: 59 IAHQAQVALDTTSLFYAHRRGEAQDVVLENELIKLTFNTRGGTVQKVELKEYKNQQGG-- 116 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 VTL + + + + + + + T ++L Sbjct: 117 -PVTLFDEKDARMQFMLGGKMENINSG--------DFFFTPINVSDTTLTMRLQASTGGT 167 Query: 166 ILFERTISLDEHY-LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL 224 + F+ T+ + F I N + Q F + + ++ Sbjct: 168 LDFDYTLLPHSYMVDFTIRANGLGNFFAPSMKTLDIAWNEMARQQEKG-FDFESRYSSLT 226 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 Y + E W+ +++++ V I ++ + + Sbjct: 227 YKIKNEGTDYLSETSAESEKIAEPLDWVAFKNQFFSCVLIAHQDFTEAHLSSTPQQKASG 286 Query: 285 YQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHY------EKDLAIPRFEMLIDWG 337 Y + A+ T P T + + + H +KDL + L Sbjct: 287 YLKDYEADMKTFFDPNGKTPTQMQMLFAPNNYHLLQHTNKLSASDKDLELEDLVYLGWPL 346 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + + + + +L + GI ++L T+ VK+L +P +K Y+S+A M+ ++PKID Sbjct: 347 FKWINRFFIIYIFDWLSSLGLSMGIVLLLLTILVKVLVYPTTRKSYLSSAKMRVLKPKID 406 Query: 398 ELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 EL K+ + Q+ +QLY + ++P+ GC P+LLQ+P++ A++ + ++E+R Sbjct: 407 ELNAKYPKPEDAMKKQQETMQLYSQYGVSPMGGCLPMLLQMPIWIALFNFVPNAIELRGE 466 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS----MFIQMKM---SP 509 + W DL+A D + L H+ I+ ++ L+ +I M+ S Sbjct: 467 S-FLWASDLSAYDDVIRWDKSIWLIGD-----HLSIFCLLFCLTNIVNTWITMRQQQNSM 520 Query: 510 PPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 Q ++ MPV F F +++ +GL Y+ S + SI+ + + + Sbjct: 521 TGEQAQQMKLMQYMMYIMPVAFFFMFNNYSSGLNYYYFLSGLTSILIMWFL-RKTTDDKK 579 Query: 566 LIDRLRSTFSKNYNS 580 L+ +L + + N + Sbjct: 580 LLAKLEANYQANKAN 594 >gi|332882339|ref|ZP_08449967.1| membrane protein insertase, YidC/Oxa1 family domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679723|gb|EGJ52692.1| membrane protein insertase, YidC/Oxa1 family domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 629 Score = 216 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 101/614 (16%), Positives = 218/614 (35%), Gaps = 54/614 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N L ++ + F E R++ + + A + Sbjct: 1 MD--KNTLTGFILIAAVLIGFSYFSRPSEAEMEAQRRQDSIATVAQQKAQMAQEAKEEAE 58 Query: 61 RAQALS---------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 A + V L+N + + N +G + L+ Y Sbjct: 59 IAHQAQVALDTTSLFYAHRRGEAQNVVLENELIKLTFNTRGGTVQKVELKEYKNQQGG-- 116 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 VTL + + + + + + + T ++L Sbjct: 117 -PVTLFDEKDARMQFMLGGKTENINSG--------DFFFTPINVSDTTLTMRLQASTGGT 167 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 + F+ + + + + +I + F + + ++ Sbjct: 168 LDFDYKLLPHSYMIDFTIQANGLGNIFAPSMKTLDIAWNEMARQQEKGFDFESRYSSLTY 227 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 Y + E W+ +++++ V I ++ + + Y Sbjct: 228 KIKNEGTDYLSETSAESEKIAEPLDWVAFKNQFFSCVLIAHQDFTEAHLSSTPQQKASGY 287 Query: 286 QAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGW 338 + A+ T P T + + + H K DL + L + Sbjct: 288 LKDYEADMKTFFDPSGKTPTQMQMLFAPNNYHLLQHTNKLSASDKDLELEDLVYLGWPLF 347 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + +L + GI ++L T+ VK+L +P +K Y+S+A M+ ++PKIDE Sbjct: 348 KWINRFFIIYIFDWLSSLGLSMGIVLLLLTILVKVLVYPTTRKSYLSSAKMRVLKPKIDE 407 Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L K+ + Q+ +QLY + ++P+ GC P+LLQ+P++ A++ + ++E+R Sbjct: 408 LNAKYPKPEDAMKKQQETMQLYSQYGVSPMGGCLPMLLQMPIWIALFNFVPNAIELRGES 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS----MFI---QMKMSPP 510 + W DL+A D + L H+ I+ ++ L+ +I Q + S Sbjct: 468 -FLWASDLSAYDDVIRWDKSIWLIGD-----HLSIFCLLFCLTNIVNTWISMRQQQNSMT 521 Query: 511 PADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 Q ++ MPV F F +++ +GL Y+ S + SI+ + + + L Sbjct: 522 GEQAQQMKFMQYMMYIMPVAFFFMFNNYSSGLNYYYFLSGLTSILIMWFL-RKTTDDKKL 580 Query: 567 IDRLRSTFSKNYNS 580 + +L + + N + Sbjct: 581 LAKLEANYQANKAN 594 >gi|288926777|ref|ZP_06420687.1| inner membrane protein OxaA [Prevotella buccae D17] gi|288336458|gb|EFC74834.1| inner membrane protein OxaA [Prevotella buccae D17] Length = 632 Score = 216 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 114/623 (18%), Positives = 241/623 (38%), Gaps = 62/623 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN-------------ERKNIQTVKQPN 47 M+ N + + L +++ + +Y P EE E + Q Sbjct: 1 MD--KNTIIGMVLIAALLFGYS-WYSQPSAEEQRAAFVQDSIAQAKKRELEKAQKADAAA 57 Query: 48 QVDNSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH----- 98 + D A RV LKN + ++N KGA + ++ Y Sbjct: 58 RKQTEQQQAAADTTALFHAAMQGEEQRVVLKNNKVELTLNSKGATVERAVVKNYVGHDIN 117 Query: 99 -LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 D S + VTL + + A+ ++TA+ P++ T + Sbjct: 118 VKDGSKDRKDVTLFEGKDQSLKFMLAAKEANINTADLYFTPSAQTDSTVTFTASAGAGRS 177 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + L + + L +S++ D T + Q R + R + + AT T+ Sbjct: 178 LSLKYTLGRDYLLHMQLSVEGMGGLFAPDMKTLDIDWQDRVKQQERGFTFENRYATLTYH 237 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQ 274 G Y + ES W+ ++++++V I + ++ Sbjct: 238 ETAGGT-----------DYLSETSEKVDEPCKESIDWVAFKNQFFSAVMIVKDDFQKNAL 286 Query: 275 FKYLSDGHARYQAKFSAN--EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + K + P + + G +F + E + RF Sbjct: 287 LTSIPQEKGSGYLKQYQARLKTAFDPNGRQPSEFEFYFGPNDFRLLQKVEHE---SRFGK 343 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLV--------GNFGIAIMLTTVFVKLLFFPLAKKQYV 384 ++ ++ P+F ++ F+ + GI ++L T+ +K+L +P+ KK Y+ Sbjct: 344 SLEMERLVYLGWPLFRWINRFFTIYVFDFLRNYFPMGIVLILITLLLKVLTYPMVKKSYM 403 Query: 385 STANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S+A M+ ++PK++E +++ + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A+ Sbjct: 404 SSAKMRVLKPKLEEATKQYDKPEDQMQKQQAMMAEYSKYGVSPLSGCLPMLIQMPIWIAM 463 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSM 501 + + ++++R + W+KDL+ DP + L + + ++ S Sbjct: 464 FNFVPNAIQLRGQS-FLWMKDLSTFDPLFEWNHNLWLIGDHLSLTCILFCVAQVLYSWMT 522 Query: 502 FIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q + Q ++ W MP++F F + + +GL Y+ S S + Sbjct: 523 MRQQRDQMVGQQAEQMKMMQWMMYLMPLMFFFMFNDYSSGLNFYYFVSLFFSAAIMWTL- 581 Query: 558 KMHGAEIGLIDRLRSTFSKNYNS 580 + + L++ L + + +N N+ Sbjct: 582 RKTTNDKKLLEILEARYRENKNN 604 >gi|228472035|ref|ZP_04056803.1| inner membrane protein OxaA [Capnocytophaga gingivalis ATCC 33624] gi|228276647|gb|EEK15360.1| inner membrane protein OxaA [Capnocytophaga gingivalis ATCC 33624] Length = 616 Score = 216 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 108/610 (17%), Positives = 217/610 (35%), Gaps = 51/610 (8%) Query: 1 MERNWN---YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME N + AL +++ + P+ + Q+ Q S Sbjct: 1 MEEKRNNTFSLIGFALMFVVLIYYMYNQKPPQQTTESTNNTTQQSSSQQVATPASTTLPT 60 Query: 58 ID----------------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 + E++N + ++ KG Q +L ++ Sbjct: 61 DSLGLSKYKETLGAFGFSAALPSAKEGAFTEIENNLIKLQVSNKGGQITNLLVKNQKT-- 118 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 N V L+ N + +T +N L + ++ + + Sbjct: 119 -YNGKPVELIKDGNA-----SFSLKFTTNDNRTLETKDLFFSPT-----LSGNTLSMKLH 167 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 ++N E +L + ++ E Sbjct: 168 VSDNQYLEYVYTLRPDEYMVDFSIRSVGLSQVFNTGVTPELLWKLKARRMEKSVTYEDRY 227 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS----KETSFHSQFKY 277 + + S +S W+ ++S I Sbjct: 228 VQAVVQYEDNRDDKLSAGGEDSEEFKSIKWVDFKQHLFSSFLISDKPLASGKISSKNLAT 287 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + + F+A ++ + F G ++ Y+K+ + + + + WG Sbjct: 288 SEGDNVQATKAFAAEFPIAFTSGELSESLHFFYGPSDYHIFKKYDKEYGLTK-AIPLGWG 346 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F +I K + + + G+AI++ T+ V++L P+ K Y+S A MK ++P+I+ Sbjct: 347 IFGWINKWFVIPVFDLLSSFMAVGVAIIVLTIIVRILLSPIQYKSYLSQAKMKVLRPEIE 406 Query: 398 ELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E+ K+K S Q+ + LY +NPL+GC P LLQ+PVFFA++ + +R Sbjct: 407 EINNKYKGSENAMKRQQETMALYSKAGVNPLSGCIPALLQMPVFFALFSFFPTAFMLRQK 466 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-------QMKMSP 509 + W +DL++ D + L +PFY HV ++PI+ S++M I QM+ + Sbjct: 467 S-FMWAEDLSSYD--AVAQLPFSIPFYGN---HVSLFPILASVTMLIYMLMTTGQMQQTK 520 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 ++ P++ +F +++ +GL +Y+ SN+I+I I E + + Sbjct: 521 QEGMPDMRFMMYLSPIMMLFFFNNYASGLSLYYFISNLITIFIMLAIKYWIIDEKRIHAK 580 Query: 570 LRSTFSKNYN 579 ++ K Sbjct: 581 IQENKQKPRK 590 >gi|315608951|ref|ZP_07883923.1| inner membrane protein OxaA [Prevotella buccae ATCC 33574] gi|315249331|gb|EFU29348.1| inner membrane protein OxaA [Prevotella buccae ATCC 33574] Length = 632 Score = 216 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 114/623 (18%), Positives = 241/623 (38%), Gaps = 62/623 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN-------------ERKNIQTVKQPN 47 M+ N + + L +++ + +Y P EE E + Q Sbjct: 1 MD--KNTIIGMVLIAALLFGYS-WYSQPSAEEQRAAFVQDSIAQAKKRELEKAQKADAAA 57 Query: 48 QVDNSYAAVLIDDRA----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH----- 98 + D A RV LKN + ++N KGA + ++ Y Sbjct: 58 RKQTEQQQAAADTTALFHAAMQGEEQRVVLKNNKVELTLNSKGATVERAVVKNYVGHDIN 117 Query: 99 -LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 D S + VTL + + A+ ++TA+ P++ T + Sbjct: 118 VKDGSKDRKDVTLFEGKDQSLKFMLAAKEANINTADLYFTPSAQTDSTVTFTASAGAGRS 177 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + L + + L +S++ D T + Q R + R + + AT T+ Sbjct: 178 LSLKYTLGRDYLLHMQLSVEGMGGLFAPDMKTLDINWQDRVKQQERGFTFENRYATLTYH 237 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFH-ESNSWLGISDKYWASVFIPSKETSFHSQ 274 G Y + ES W+ ++++++V I + ++ Sbjct: 238 ETAGGT-----------DYLSETSEKVDEPCKESIDWVAFKNQFFSAVMIVKDDFQKNAL 286 Query: 275 FKYLSDGHARYQAKFSAN--EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + K + P + + G +F + E + RF Sbjct: 287 LTSIPQEKGSGYLKQYQARLKTAFDPNGRQPSEFEFYFGPNDFRLLQKVEHE---SRFGK 343 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLV--------GNFGIAIMLTTVFVKLLFFPLAKKQYV 384 ++ ++ P+F ++ F+ + GI ++L T+ +K+L +P+ KK Y+ Sbjct: 344 SLEMERLVYLGWPLFRWINRFFTIYVFDFLRNYFPMGIVLILITLLLKVLTYPMVKKSYM 403 Query: 385 STANMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S+A M+ ++PK++E +++ + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A+ Sbjct: 404 SSAKMRVLKPKLEEATKQYDKPEDQMQKQQAMMAEYSKYGVSPLSGCLPMLIQMPIWIAM 463 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSM 501 + + ++++R + W+KDL+ DP + L + + ++ S Sbjct: 464 FNFVPNAIQLRGQS-FLWMKDLSTFDPLFEWNHNLWLIGDHLSLTCILFCVAQVLYSWMT 522 Query: 502 FIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q + Q ++ W MP++F F + + +GL Y+ S S + Sbjct: 523 MRQQRDQMVGQQAEQMKMMQWMMYLMPLMFFFMFNDYSSGLNFYYFVSLFFSAAIMWTL- 581 Query: 558 KMHGAEIGLIDRLRSTFSKNYNS 580 + + L++ L + + +N N+ Sbjct: 582 RKTTNDKKLLEILEARYRENKNN 604 >gi|298373472|ref|ZP_06983461.1| inner membrane protein OxaA [Bacteroidetes oral taxon 274 str. F0058] gi|298274524|gb|EFI16076.1| inner membrane protein OxaA [Bacteroidetes oral taxon 274 str. F0058] Length = 633 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 87/612 (14%), Positives = 215/612 (35%), Gaps = 43/612 (7%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIE---------EMNNERKNIQTVKQPNQVDNSYA 54 N + I L V I +Q F + + + N + Q Q S Sbjct: 2 NKQTVIGIILIVAIFIGFQYFNKPSKEQIAERQRINDSIKNAQTEQQLAIQQQVTPTSDT 61 Query: 55 AVLIDDRA-----------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 ++ + A + ++ ++ L + KG L+ Y Sbjct: 62 TRIVASDSLREAHFGIFAKAAKGDTAQITIETELLKLRFSPKGGFVSYAELKNYKTY--D 119 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 P+V S + E+ ++L + Sbjct: 120 KKPLVLFEGESENSFGITMQTSDNRVLTTNEVYFVPQPITKDGNGNT--ILTLRLQPETD 177 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I F I + + + + S + K + + + + Sbjct: 178 SYIDFIYKIPQNSYCVDFDIVAHNMQSYFPPMTNRLDFTWNTKIRQQELGRKTENRYATL 237 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK--YLSDG 281 + + + K+ + W D +++++ + + + Y + Sbjct: 238 NYMYTDNDIERLKEGKNDAKSASTPTKWFAAKDHFFSTILMSKTGFATANLSSEIYSDEN 297 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD------LAIPRFEMLID 335 + + I + T L+ ++ + + + L Sbjct: 298 SKYLKNYTVHSVINFDATGNKPTNLQLYFVPNQYKVLAGFNDGLDKAQRPNLQELIPLGW 357 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + L + + + ++G+ I++ TV +K++ PL K Y+S+A M+ ++P+ Sbjct: 358 TLFRWVNKYAIIPLFNLLGSFMSSWGLIILIVTVIIKIVLLPLTFKSYMSSAKMRVLKPQ 417 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 +D + E+ Q+A + LY++ ++P+ GC P++LQ+P+ A++ + + E+R Sbjct: 418 VDAINERIPADKMMERQQAQMSLYRSVGVSPMGGCLPMILQMPILVAVFMYLPSAFELRQ 477 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--- 512 + W DL+ D T +PF H+ ++ ++M+++ I K++ Sbjct: 478 QS-FLWATDLSTFDTLPFLTWNTAIPFIGK---HISLFCLLMTITNVIYTKVNMAATAGS 533 Query: 513 ---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 ++ MP++F F + + +GL Y+ S +++++Q + ++ + L+ + Sbjct: 534 NQQMAMMKWMMYLMPLMFFFIFNEYASGLTYYYFVSLLLTVLQTYL-FRLFVNDQKLLQQ 592 Query: 570 LRSTFSKNYNSQ 581 L ++ Sbjct: 593 LELAKQTKKPAK 604 >gi|260174448|ref|ZP_05760860.1| putative inner membrane protein translocase component YidC [Bacteroides sp. D2] gi|315922715|ref|ZP_07918955.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696590|gb|EFS33425.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 617 Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats. Identities = 105/602 (17%), Positives = 225/602 (37%), Gaps = 50/602 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49 M+ N + L I++ + + + +++ K + Sbjct: 1 MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKKYYDSIAVVQQQEEALKAKTEAAL 58 Query: 50 DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 NS V + AL ++ ++N + KG + L+ Y + Sbjct: 59 ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQDK 117 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +P+V + N F + + + + ++L +A Sbjct: 118 KTPVVLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I F T+ + YL T + + F + + Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMEDKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + K N W+ +++++SVFI ++ S + + Sbjct: 228 TYKVTGDNVDNLSAAKDDSQNLPGRIDWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287 Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWGW 338 Y +SA T P T + + G F T+ +K+ + R L Sbjct: 288 GYIKDYSAEMNTFFDPTGKEPTEMYFYFGPNHFKTLKALDKERDEKWELHRLVYLGWPLI 347 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + GI +++ T+ VK++ +P K Y+S+A M+ ++PKIDE Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKIDE 407 Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + +K+ + Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R Sbjct: 408 INKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513 + W DL+ D T +PF H+ ++ ++M+++ + K + D Sbjct: 468 -FLWADDLSTYD--AFITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMSMQDTGAQ 521 Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ E L+ L Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRTTDETKLLAIL 580 Query: 571 RS 572 + Sbjct: 581 EA 582 >gi|281357428|ref|ZP_06243916.1| membrane protein insertase, YidC/Oxa1 family [Victivallis vadensis ATCC BAA-548] gi|281316031|gb|EFB00057.1| membrane protein insertase, YidC/Oxa1 family [Victivallis vadensis ATCC BAA-548] Length = 590 Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats. Identities = 124/593 (20%), Positives = 225/593 (37%), Gaps = 63/593 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF---------------------------YVYPRIEEM 33 M+ + +AIA+ ++++ W+ F + Sbjct: 1 MKFDKETLIAIAVCCVVLFGWEPFSRYMGWSAAPVPPAAAAPAAAPQPNTEVPVSAVPAA 60 Query: 34 NNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 + V V+ + + +S P VELKN ++ S + + Sbjct: 61 APQPNTEVPVSAVPAVEPAVPEKKTQEALVQVSPLPPVELKNKDMVLSFDPVRGSIRSIT 120 Query: 94 LRGYHLDVSSNSPIVTL--LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151 L Y + + ++ IV S + Y A + +V T + Sbjct: 121 LEHY-QNAARDARIVLDQSFSSQGALSLYQAGVPWVVTQVVKNRVEPGSDGQSRYLLDRR 179 Query: 152 PTTPIKLVFKNANNILF---------ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRI 202 T F + I+ + + N + Sbjct: 180 IQTIGGDDFLLSQVWEIGATGYETDCSFQITNLARRPLVLNQLIMNGGDLAAWA-----M 234 Query: 203 MRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYW--- 259 + + E D ++ +D ++ W GIS+KY+ Sbjct: 235 ISGDKMRTPSHRMDFETADGSFYDIKADKKDDADYFQNPAPMV----DWAGISNKYFGVI 290 Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 + P + + D + + G+S + ++G K + Sbjct: 291 LTAKEPFQLFQGRTMQMRGKDKVYIPTVGARLPAMMLNAGESKSVAFRYYSGPKMTQLLE 350 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 +E + WG ++A+ + ++ + G++G++I++ T+ V+LLF+P+ Sbjct: 351 AFEPSTNRMMH---LAWGPLDYLARLLLWVLVQLHGFCGSYGVSIIILTLMVRLLFYPVT 407 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K S M+ +QPKI LREK+K +P Q+L M++LY+ +NP GC PILLQIPV Sbjct: 408 AKANASMRKMQAVQPKIAALREKYKDNP-QLLNSKMMELYREEKVNPFGGCLPILLQIPV 466 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 FFA+Y + ++++R + W KDLAAAD L+ + + ++M+ Sbjct: 467 FFALYATLDGAVQLRQVS-FLWAKDLAAADTVAKIPLYFYD-------LPINPLVLMMTA 518 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M IQ +M+P D Q ++ MPVV + L P+GL +YW+ SN SI+Q Sbjct: 519 LMMIQQRMTPMAMDPMQKKMMLMMPVVMLIFLYDLPSGLTLYWTVSNFFSIIQ 571 >gi|332521156|ref|ZP_08397614.1| membrane protein insertase, YidC/Oxa1 family [Lacinutrix algicola 5H-3-7-4] gi|332043249|gb|EGI79446.1| membrane protein insertase, YidC/Oxa1 family [Lacinutrix algicola 5H-3-7-4] Length = 634 Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats. Identities = 114/625 (18%), Positives = 231/625 (36%), Gaps = 64/625 (10%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMN------NERKNIQTVKQPNQVDN 51 ME + L I+ + + P EE+ + + + + N Sbjct: 1 MEEKKLDVKSIIGFVLIFGILL-FMMWQNQPTPEELEAEEKAKQAQIDAENKAKAAAAQN 59 Query: 52 SYAAVLIDDRAQAL--------------------SMSPRVELKNPSLIGSINLKGAQFDD 91 D + + + N L + KG + Sbjct: 60 DTKVTTAQDFSNTTEGDSLRKIALQNKLGAFSYFAQDGETVVDNGVLQLKFSNKGGHLAE 119 Query: 92 LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151 + L + V +S + L+ N A + + + N+ ++ + Sbjct: 120 VKLNKF---VDYDSLPIYLVKDKN------ASFNINFGTTDSRILNTQDLYFQPTKTKNG 170 Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 T + + K + E + + + +I S + + Sbjct: 171 ENTIVSMKLKVSETKFLEYKYIIKPNDYMIDFTIQSQGLSSEINSSQEVNLKWEQKAYRH 230 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + E L + + + + E W+ +++S+ K+ Sbjct: 231 DESISYENRYTRLTYQHDDGKIDKLSQGGEDDDVEEDMDWMSFRQHFFSSILTTDKQFKS 290 Query: 272 HSQFKYL----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + + + +FSA L G I + L+ G + + +Y+K+L Sbjct: 291 VALTSKDLVEDEEIDTVFTKQFSAKTALALNGNEINESLGLYYGPTDSKILKNYDKNL-- 348 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + WG F +I K +F+ + F + +GIAI++ TV +KL + KQY+S Sbjct: 349 -EESIPFGWGIFGWINKYLFVPLFSFLSSFLPYGIAIIVMTVLIKLSMSFVQYKQYLSQM 407 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 MK ++P++D +REK K + + Q+ + L +PLAGC P L+Q+PVF+A++ Sbjct: 408 KMKILKPELDAIREKHKDNKMKA-QQETMALQNKAGASPLAGCLPALIQMPVFYALFMFF 466 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + +R + W DL++ D F +PFY H+ ++PI+ +++F MK+ Sbjct: 467 PTAFALRQK-KFLWADDLSSFDSIYKFPDGFSIPFYG---DHISLFPILAGIAIFFYMKL 522 Query: 508 SPPPAD---------KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 + A ++ +M P++ + +S+ +GL +Y+ SN+ISI Sbjct: 523 TTGQQQMSAPQQEGMPDMAKMMKYMIYFAPIMMIIFFNSYASGLSLYYFISNLISIGILL 582 Query: 555 VIMKMHGAEIGLIDRLRSTFSKNYN 579 VI E ++ +++ +K Sbjct: 583 VIKNFILDEEKILAGIQANKAKPKK 607 >gi|229496606|ref|ZP_04390320.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406] gi|229316503|gb|EEN82422.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406] Length = 620 Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats. Identities = 97/603 (16%), Positives = 229/603 (37%), Gaps = 46/603 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + ++L +++ + F P EE + P + +S A + Sbjct: 1 MD--KNTIIGVSLIAVVLIGF-TFLNRPTPEEATPKEPIEAISPAPAETTSSSAVLPTST 57 Query: 61 RAQALSMSPR----------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 + A SP ++L+N L+ S + +G L+ Y + L Sbjct: 58 DSLAPETSPLLGLSGGQEQIIKLENEKLVVSFSNRGGAAVQARLKEYKA---QKEQPLDL 114 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 +P + + +L + S ++L +A + F Sbjct: 115 FTPEDCSFNLPLRTKMGQVIDTKDLYFEPIAQSDTS-------LTMRLRVDSATYLDFAY 167 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 T+ +++ L + + + + + K + ++ + + A+ Sbjct: 168 TLVPNDYRLRLSISGAHLDRLFPSNMRYQDLEIGQKIRRQELSWQNENQYSAIYYKLFAD 227 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 + + + S +E SW+ DK+++SV+I +F S + + Sbjct: 228 KVERLSDKGSKSEKVNERISWIAFKDKFFSSVWIADAANAFESSSLEQTVMPKDGEYTKD 287 Query: 291 ANEITILPGKSI---TTTNFLFAGAKEFPTIHHYEKDL-------AIPRFEMLIDWGWFY 340 +T P + + L+ G E + Y++ + + + + + Sbjct: 288 CKVVTSFPFSNAQDASAHFTLYMGPLEHHLLKAYDQGIEEDGDRLHLEHLVYVGGSVFRW 347 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + ++ + + N+G+ I+L T+ +K PL K Y+S A M+ ++P+I + Sbjct: 348 LNVHLIIPIVDFLSKYISNWGLIILLLTLIIKTALSPLTFKSYMSQAKMRVLKPQIQAIN 407 Query: 401 EKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +K+ + + LYK +P++GC P+LLQ+P ++Y ++ +R Sbjct: 408 DKYPGQEQAMMMKRSQETMALYKQAGASPMSGCLPMLLQMPFLISLYMFFPTAIALRGES 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSP-PPADK 514 + W +DL+ D + F I H+ ++ ++ +++ + + M+ D Sbjct: 468 -FLWAQDLSTYDAVISWN-FDIPILSGLMGNHLSLFCLLWAVTNILYSRYTMNMSATGDN 525 Query: 515 GQAMILNWMPVVFVFA----LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 Q ++ +MP + ++ +GL Y+ S +I+I+Q + ++ E ++ ++ Sbjct: 526 QQMKMMKYMPYIMSIMFFFFFNNNASGLCYYYFISTLITILQ-FLGSRLLINEEKVLAKM 584 Query: 571 RST 573 Sbjct: 585 EEN 587 >gi|332296677|ref|YP_004438599.1| Membrane protein oxaA [Treponema brennaborense DSM 12168] gi|332179780|gb|AEE15468.1| Membrane protein oxaA [Treponema brennaborense DSM 12168] Length = 603 Score = 215 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 125/613 (20%), Positives = 230/613 (37%), Gaps = 53/613 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQN----FYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAA 55 ME N AI LS +++ + F+ P ++ + Q+ + A Sbjct: 1 ME--KNTVWAIILSTLVLVIFMFVQITFFPAVPAAKQTEQYQNTADVSSAQGQLPVNTVA 58 Query: 56 VLIDDRAQALS------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 V + +L+ + ++N + + +G + L + Sbjct: 59 VSGAEENGSLNAAGSAGDSAAAVTEEQFVIQNGKVKVTFTNRGGDIINYELLEHK---DG 115 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 NS + + S A+ T ++ + + + G T T Sbjct: 116 NSGVEMADNVSAKNRAFSVSFGAAGTPIIDDIFSVKKIDDNTIGFYKTFTVKNND--GTE 173 Query: 164 NNILFERTISLDEHYLFK-----IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 ++ +F + + D I T + + R + E Sbjct: 174 SSFVFAKQYTFDPAGYMFRLDVSIDGDDTLKGLAFGNSAYTIRTSPQIGPYFDSKNNRYE 233 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + + S ++ + + + +W G+S KY+ + +P T Sbjct: 234 NRTFMSYNGSKKKKT--TLGSGQSKVYDDGYTWTGVSGKYFEILGVPLNPTVMQDVTYSA 291 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD-------LAIPRFE 331 + Y + T + + G K T+ Y + E Sbjct: 292 ALEVDNYANAQVMMSRGPITQSDAQDTYYFYVGPKTEETLKIYNNAAENVWHLSGLKLNE 351 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 L G +++ + M Y ++ N+G++I++ T+ +KL+ FPL KK +ST M+ Sbjct: 352 SLESSGILFWLETFLKWCMELLYKIIPNWGVSIIILTILLKLVLFPLTKKSSLSTLKMQE 411 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QPK+ E++ KFK P ++ M +LYK NPL+GC P+L+Q P+ FA+Y + + Sbjct: 412 LQPKMQEIQAKFKDQPDKM-NAEMAKLYKETGYNPLSGCLPLLIQFPLIFAMYNLFNNYF 470 Query: 452 EMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI----QMK 506 E R A F GWI DL+ D LPF + + PII +S + Sbjct: 471 EFRGAMFIPGWIPDLSVGDSVYALN--FNLPFLGNQ---LRLLPIIYVISQLLFGKVTQS 525 Query: 507 MSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + A Q I+ + MP+ F F + P+GL+IYW+ SN + +VQQ ++ K A+ Sbjct: 526 GTAAGASGMQMKIMMYGMPLFFFFIFYNAPSGLLIYWTVSNALQLVQQVILNKTMKAK-- 583 Query: 566 LIDRLRSTFSKNY 578 + S + Sbjct: 584 -RAEIESREPEKK 595 >gi|299135904|ref|ZP_07029088.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX8] gi|298602028|gb|EFI58182.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX8] Length = 601 Score = 215 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 104/586 (17%), Positives = 220/586 (37%), Gaps = 62/586 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNF---YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 + N ++ V + + +++ Q + + P E+ ++ AA Sbjct: 15 QDNRSFMVMLLVMFGVIFGLQYWRAKHTPPPPEKSPAITQSATPQSSAPAAGTPTAASSA 74 Query: 59 DDRAQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTK 117 A + + +N + + +GAQ L+G++ +V L + + Sbjct: 75 SSVATVQGTAESTTVVENELYRITFSNRGAQVTSWVLKGFNDTTGHPLNLV--LDDAAKQ 132 Query: 118 NAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 Y L +L + V + + A N+ +T S Sbjct: 133 FGYPLSLYTYDAGLTQQLKQALYVPSATGSLQAPASLSFD---YAAGNVTVHKTFSFGAD 189 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 Y+ V + P + + + + ++ DI Sbjct: 190 YVIHADTVVLRDGAPISALLAW-------PAALGDMENQLAYGYGQIDTSTNGKDEHLDI 242 Query: 238 EKSSISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ--------AK 288 + +S + + G+SD+Y+A+VF+P + + + Sbjct: 243 KHTSGGATLKQPFDFAGVSDQYFAAVFMPDQPQDAMLVTLHNQIDVNKMSRMPGFSKGTA 302 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 T + S LF G K + E L+D+G++ + K +F+ Sbjct: 303 QVPVLGTAVGNVSGHNQTRLFVGPKSIKVLKSVRTANN-NTLETLLDFGFWGPVGKVLFL 361 Query: 349 LMSYFYN---------LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + ++ ++G AI+ T+ + L+ PL + S M+ IQP+ID + Sbjct: 362 GLQAVHSALPHALDAVHDYSWGWAIIFFTILINLILLPLRVQGMRSMLKMQRIQPQIDAI 421 Query: 400 REKFKQSP-----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 + K+K + +++ K + ++ GC P L+Q+P+ FA + +++ +E+R Sbjct: 422 KAKYKNPKATDPKMAEMNAEIMKTQKDNGVSMFGGCVPSLIQLPLLFAFFTMMTRVVELR 481 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-D 513 + ++ W+ DL+ ADP + I PI+M ++ F+ +P P D Sbjct: 482 QSHWY-WLHDLSLADPHH-------------------ILPILMVITSFLAQYYTPSPGVD 521 Query: 514 KGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q ++ +M P+ + + +GL +YW+ SN++ I+QQ V+ + Sbjct: 522 PQQQKMMAFMMPLFSGYMTWQYASGLALYWNISNIVMIIQQQVMNR 567 >gi|312129338|ref|YP_003996678.1| membrane protein insertase, yidc/oxa1 family [Leadbetterella byssophila DSM 17132] gi|311905884|gb|ADQ16325.1| membrane protein insertase, YidC/Oxa1 family [Leadbetterella byssophila DSM 17132] Length = 611 Score = 215 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 110/599 (18%), Positives = 222/599 (37%), Gaps = 38/599 (6%) Query: 1 MERN--WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 ME NY + + L V++ A+ FY T P V+ I Sbjct: 1 MENKIDKNYIIGLLLMVLMFTAYSIFYTPSNPTTPEKTEVTSTTKTAPKAVN------PI 54 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS----SNSPIVTLLSPS 114 D A + + ++N + + + +G + L+ Y + + + S Sbjct: 55 LDSTTAAAPEKEIVVENKDIKVTFSSRGGVIKQVALKDYKTYADYIGGKDKAEMVIFDGS 114 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 + + + TA + + P+ LVF + Sbjct: 115 KSNLDF-----EIPTATGALKLSQVNFHTDAVNATVAEGQPLTLVFSTQIQGGTLQKTYT 169 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 F+I ++ ++ + + + + + + E+ + Sbjct: 170 LNDKGFEIQHGISTQGLEAVVRNAPIVLNWENHLQVLENDLNENRKGSQINYFD-KEENF 228 Query: 235 SDIEKSSISNFHE----SNSWLGISDKYWASVFIPSKETSFHSQFK--YLSDGHARYQAK 288 D+ +S SN +E W KY+ S + ++F + + + Sbjct: 229 EDLGGNSTSNANEEAELPVKWFSFHQKYFTSGIVFENSFFQKAKFNMETPTADESVVKIG 288 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF---YFIAKP 345 + EI T+ + G E + D F+ + G+ Sbjct: 289 TATAEIAYADFIGNKTSFKYYFGPNELKELKAVGYD-----FQKNLYLGYDIVKPINRYI 343 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 L ++ + V N+G+ I++ + +KL+ PL K Y+S+A M+ + P+I+ ++EK Sbjct: 344 FVPLFTWVESFVSNYGLLIIVVVLIIKLVLTPLIYKSYMSSAKMRVLAPEINAIKEKVGD 403 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 P + LQ+ ++LY+ +NPL+GC P+LLQ+P+ +++ + + R + W KDL Sbjct: 404 DPVK-LQQETMKLYQQVGVNPLSGCIPLLLQMPILMSVFFLFPNLVMFRQK-EFLWAKDL 461 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-QAMILNWMP 524 + D I F + + V + I + + +P I P Sbjct: 462 STYDNL-ISWGFNMPILGNHLSLFVVLMTISSLAFTYYNNQNTPDQPGPVDMKKISYIFP 520 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI--GLIDRLRSTFSKNYNSQ 581 VVF+F L+SFPA L Y+ SN+++I QQ ++ + E +++ + + + Sbjct: 521 VVFMFVLNSFPAALSFYYLVSNLVTIAQQLIVKRFVNEEKILSILENNKRNYHSKPQKK 579 >gi|88803448|ref|ZP_01118974.1| putative inner membrane protein translocase component YidC [Polaribacter irgensii 23-P] gi|88781014|gb|EAR12193.1| putative inner membrane protein translocase component YidC [Polaribacter irgensii 23-P] Length = 622 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 103/609 (16%), Positives = 230/609 (37%), Gaps = 58/609 (9%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME+ N F+ + L I++ W + E I + + Sbjct: 1 MEQKKFDINSFIGMILLGGIIFWWMSTRETEIKETPIATTTEIIAQTGDPTGKSISNSST 60 Query: 58 IDDRA---------------QALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDV 101 I++ + A++ S + + +N + +I+ KG Q ++ ++ Y Sbjct: 61 IENDSIKQVALTNRLGAFAQSAITASEGISILENELIKLTIDNKGGQIKEVLIKNYKT-- 118 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 +S + ++ +N + + + N+ ++ + + L Sbjct: 119 -YDSLPLYMIKDNNG------SFNLNFGTTDNRILNTKDLFFQPTITQNGENQVVSLKLN 171 Query: 162 NANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 ++ E + Y+ S +P + + Sbjct: 172 VSDTKFLEYRYEMKPKEYMVNFSIRSQGLSNVINASTPMNLDWSLNAYRNEKSMKTENKM 231 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY--- 277 + K+ E +Y + ++ W+ ++ S + + + Sbjct: 232 YSWYYYKTENEVEYLRPGNTEVA---NDVDWVFYKQHFFTSALLTDTPFNNATVTSTDLV 288 Query: 278 -LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 + + ++ L + F G ++ + Y+ ++ Sbjct: 289 LNEELDTVFTKRYELKTPLALSNGELNYNMKWFYGPSDYNLLESYDGTDLDQTADLG-WG 347 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + + + + + ++ N+G+ I+L T+ V+L+ PL K Y+S+A MK I+P++ Sbjct: 348 IFGFLNRTVFYPVFNLLKGVLSNYGLIIILMTIIVRLIMSPLVYKSYLSSAKMKVIRPEL 407 Query: 397 DELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 L EK+ Q+ + + + ++ ++GC P LLQ+PVFFA++K +L +R Sbjct: 408 TALNEKYPGKENAMKRQQETMAIQRKAGVSMMSGCIPALLQMPVFFALFKFFPTNLALRQ 467 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + W DL++ D IF L +PFY HV ++PI+ S+++F MKM+ Sbjct: 468 ES-FLWAPDLSSYD--TIFQLPFTIPFYG---DHVSLFPILASIAIFFYMKMNQSQQANM 521 Query: 516 QA----------MILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 QA ++ +M P++ +F +++ + L +Y+ SN+++IV VI Sbjct: 522 QAPAQEGMPDMGKMMKYMIYFSPIMMLFFFNNYASSLSLYYFISNLLTIVIMLVIKNYVI 581 Query: 562 AEIGLIDRL 570 E + ++ Sbjct: 582 DEDKIHAQI 590 >gi|319954150|ref|YP_004165417.1| protein translocase subunit yidc [Cellulophaga algicola DSM 14237] gi|319422810|gb|ADV49919.1| protein translocase subunit yidC [Cellulophaga algicola DSM 14237] Length = 618 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 112/592 (18%), Positives = 220/592 (37%), Gaps = 57/592 (9%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME + L I+ + + P EE+ ++ + + + + Sbjct: 1 MEEKKLDVKSIIGFVLIFGILL-FMFWQNQPTDEEVAAKKVEQEQIDAKAKEEKVEVNTE 59 Query: 58 IDDRAQALSMSPRVE--------------------LKNPSLIGSINLKGAQFDDLNLRGY 97 L S V L+N + I+ KG Q + ++ + Sbjct: 60 QKAPVLNLQDSTAVTNYKNTIGAFGFTKPSEETTVLENNLVYLRISNKGGQIIEAKMKNF 119 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 +S V L+ N A + N+ N+ ++ S + Sbjct: 120 TT---YDSIPVYLVKDGN------ASFALNFSTNDNRTLNTADLFFEPSLTTSGDNQVLS 170 Query: 158 LVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 + K + N E + + YL S P + K + + Sbjct: 171 MKAKISENQFLEYRYEMKPDDYLVDFAIKTQGLSSVINNTKPINLDWKLKAIRHSKSIKY 230 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS----FH 272 + + + + + WL +++S+ +K F Sbjct: 231 SNRYTRLTYNHEDGKISKLSDSSDDDEETEKDVKWLSYRQHFFSSILATNKPFESAKLFS 290 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 +Y +++ L G ++ + G + + Y+ E Sbjct: 291 KNLVEDESHTQKYMKDYASEMPLKLEGGELSYAMNWYYGPTDAKVLAQYKDL----GLED 346 Query: 333 LIDWGWFYF--IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + +GW F I + +F + F + + GIAI++ T+ V+L P+ K Y+S A MK Sbjct: 347 SVPFGWGIFGLINRYVFTPLFTFLSGMVPAGIAIIIMTILVRLAMSPVTYKSYLSQAKMK 406 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++P+I E+ EK+K + + Q+ ++L ++PL+GC P L+Q+P+F+A++ S Sbjct: 407 VLKPEIAEINEKYKDNAAKK-QQETMKLNTKAGVSPLSGCIPALIQMPIFYALFMFFPTS 465 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ------ 504 +R P + W DL++ D I L +PFY HV ++PI+ S+++F Sbjct: 466 FALRQKP-FLWADDLSSYDV--IAQLPFTIPFYG---DHVSLFPILASIAIFFYMMMTTG 519 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M+ P I+ P++ + +S+ +GL +Y+ SN+I+I I Sbjct: 520 QNMTQQPGMPNMKFIMYLSPLMMLVFFNSYASGLSLYYFISNLITIFIMLAI 571 >gi|329955034|ref|ZP_08296015.1| membrane protein insertase, YidC/Oxa1 family domain protein [Bacteroides clarus YIT 12056] gi|328526324|gb|EGF53339.1| membrane protein insertase, YidC/Oxa1 family domain protein [Bacteroides clarus YIT 12056] Length = 615 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 109/600 (18%), Positives = 227/600 (37%), Gaps = 48/600 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER---KNIQTVKQPNQVDNSYAAVL 57 M+ N + L +++ + + + +R Q ++ + A L Sbjct: 1 MD--KNTITGLVLIAVLLVGFSFLSRPSKEQLAAQQRYYDSIAQVQQREADLKAKAEAAL 58 Query: 58 IDDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 +D+ + S +V ++N ++ KG + L+ Y Sbjct: 59 ANDKEAQTADSTALFFNALQGTDSQVTIQNNLAELTVATKGGRISSATLKEY--MGQDKK 116 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 VTL S + + N + + T ++L +A+ Sbjct: 117 TPVTLFSGDDASMNFLFY--------NKKETIQTEDYYFTVVNRTDSTVTMRLSADSASY 168 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 I F + ++ YL T + + + + + + Sbjct: 169 IDFNYAMH-NDTYLVDFTIDATGMANKLASTDYVDIEWSQRARQIEKGYTYENRLSELTY 227 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + Y K+ E W+ +++++SVF+ + + + Y Sbjct: 228 KITGDGTDYLSAGKNDEKEVAERLDWIAFKNQFFSSVFLADADFEKTKLNSKMEAQGSGY 287 Query: 286 QAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWGWFY 340 +SA T P T F + G + T+ +K + R L + Sbjct: 288 IKDYSAEMSTAFDPTGKTPTQLFFYFGPNHYKTLTALDKGREDKWELNRLVYLGWPLIRW 347 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + + + GI ++L T+ VK + FP K Y+S+A M+ ++PKIDE+ Sbjct: 348 INKWFTINIFDWLSSWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKPKIDEIG 407 Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +K+ + Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R + Sbjct: 408 KKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS-F 466 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQ 516 W DL+ D +PF H+ ++ ++M+++ + + D Q Sbjct: 467 LWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTRFMMQQQDTGANPQ 521 Query: 517 AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + WM PV+F+F L+ +P+GL Y+ S +IS+V +IM+ E L+ +L + Sbjct: 522 MAAMKWMSYLMPVMFLFILNDYPSGLNYYYFISTLISVV-TTLIMRKMTNEEALLAQLEA 580 >gi|213962572|ref|ZP_03390834.1| inner membrane protein OxaA [Capnocytophaga sputigena Capno] gi|213954898|gb|EEB66218.1| inner membrane protein OxaA [Capnocytophaga sputigena Capno] Length = 609 Score = 214 bits (544), Expect = 4e-53, Method: Composition-based stats. Identities = 114/596 (19%), Positives = 232/596 (38%), Gaps = 42/596 (7%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEM---NNERKNIQTVKQPNQVDNSYA 54 M+ + AL I++ W P EE+ +++ N +N+ Sbjct: 1 MDERKFDVKSIIGFALIFILLM-WFMNNNKPSQEELAKHKAQQEQQANKTAANTQNNTST 59 Query: 55 AVLID------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 D + + L+N L +I+ +G Q ++ L+ + ++ V Sbjct: 60 VQPTDLGNFAYSTTLPSAKNEVTVLENKDLKLTISNRGGQPKEVLLKEFKT---YDALPV 116 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L+ N A T + N+ ++ + + + + K + N Sbjct: 117 YLVKDWN------ATFSLNFTTAQDKKLNTKDLYFEPTLSENNGSQVLSMKLKTSENTYL 170 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 E +L + + + + S I E + Sbjct: 171 EYVYTLPKEGYMLDLVVRSQGLAGAVNTSKPMNIDWKLQARRMEKSVTYENRYTQAAIQY 230 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 ++ + + E SW+ + SV I + + + + K Sbjct: 231 EGDRINRMSQAGNDEQKEEKVSWVAYKQHLFTSVLISDNPFEKGNFISHNIAINEGKEVK 290 Query: 289 FSANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 ++ N +T LP ++ + + G ++ + Y + + + WG F ++ K Sbjct: 291 YTKNFLTSLPIKAKSGELSESLHFYFGPSDYNVLKQYNDKYELTEL-IPLGWGIFGWLNK 349 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 +F+ + F + G+ I+L T V++L P+ K YVS A MK ++P+IDE+ +K+ Sbjct: 350 WLFIPLYNFLADYFSVGLVIILMTFIVRILLSPIVYKSYVSQAKMKVLRPEIDEINKKY- 408 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 P Q+ + LY +NPL+GC P LLQ+PVF A++ +R + W D Sbjct: 409 -DEPMKRQQETMALYSKAGVNPLSGCIPALLQLPVFLALFNFFPTEFGLRQKS-FLWAHD 466 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI--LN 521 L++ D IF L +PFY HV ++P++ S+++ I M+ Q + + Sbjct: 467 LSSYD--AIFELPFSIPFYGS---HVSLFPLLASIAILIYSLMTMAQTVQPQQPGVPNMK 521 Query: 522 WM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++ P++ +F +++ +GL +Y+ SN+++I I E + +++ Sbjct: 522 FLIYLSPIMMLFFFNNYASGLSLYYFISNLLTIGIMLAIKYWIIDEKKIHAQIQEN 577 >gi|298482875|ref|ZP_07001058.1| inner membrane protein OxaA [Bacteroides sp. D22] gi|298271075|gb|EFI12653.1| inner membrane protein OxaA [Bacteroides sp. D22] Length = 617 Score = 214 bits (544), Expect = 4e-53, Method: Composition-based stats. Identities = 103/602 (17%), Positives = 225/602 (37%), Gaps = 50/602 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49 M+ N + L I++ + + + +++ K + Sbjct: 1 MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKKYYDSIAVVQQQEEALKAKTEAAL 58 Query: 50 DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 NS V + AL ++ ++N + KG + L+ Y + Sbjct: 59 ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQDK 117 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +P++ + N F + + + + ++L +A Sbjct: 118 KTPVMLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I F T+ + YL T + + F + + Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMEDKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + K + W+ +++++SVFI ++ S + + Sbjct: 228 TYKVTGDNVDNLSAAKDDSQDLPGRIDWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287 Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWGW 338 Y +SA T P T + + G F T+ ++ + R L Sbjct: 288 GYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELHRLVYLGWPLI 347 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + GI +++ T+ VK++ +P K Y+S+A M+ ++PKIDE Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKIDE 407 Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + +K+ + Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R Sbjct: 408 ISKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513 + W DL+ D I T +PF H+ ++ ++M+++ + K + D Sbjct: 468 -FLWADDLSTYD--AIITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMSMQDTGAQ 521 Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ E L+ L Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRKTTDETKLLAIL 580 Query: 571 RS 572 + Sbjct: 581 EA 582 >gi|315928320|gb|EFV07635.1| 60Kd inner membrane family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 500 Score = 214 bits (543), Expect = 5e-53, Method: Composition-based stats. Identities = 126/530 (23%), Positives = 236/530 (44%), Gaps = 55/530 (10%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRI--EEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 + +A+ +S + + F++ + E N +KN Q N + A Sbjct: 9 QQKRILLAVVISFLFFVIYDYFFIPKQPLKIEQNITQKNQQNTSINNTPNIQNATTNTPS 68 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A S ++++ I+ G + L+ + + L+S N+ Y Sbjct: 69 AALVSQDSVISKVQSKHFEAQIDSFG-RISAFYLKD-RKYQNEKGEFINLVSKENS--PY 124 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 E+ + + N E V N + + + + + +N + + E+ I+ + Sbjct: 125 PLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLTQNLSGLKIEKDITFYPKGNY 184 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 +I ++ N+ ++P A +++ V + + +++ K D+EK Sbjct: 185 EIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNKETIETYKDGDVEKD 236 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 +N S D+Y+A+ F +K + + Sbjct: 237 ESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAISKDANQNPIVFAYS 281 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 + G+KE + + PR E ++++GWF FIAKPMF +++ + +GN+ Sbjct: 282 DNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNW 336 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK 420 G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K PQ + M++LYK Sbjct: 337 GWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYK 395 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGIL 480 H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ DP Sbjct: 396 KHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYF-------- 447 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 I PI+M +MF+Q ++P D QA I+ ++PV+F F Sbjct: 448 -----------ILPILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTF 486 >gi|237719464|ref|ZP_04549945.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229451324|gb|EEO57115.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 617 Score = 214 bits (543), Expect = 5e-53, Method: Composition-based stats. Identities = 105/602 (17%), Positives = 225/602 (37%), Gaps = 50/602 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49 M+ N + L I++ + + + +++ K + Sbjct: 1 MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKKYYDSIAVVQQQEEALKAKTEAAL 58 Query: 50 DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 NS V + AL ++ ++N + KG + L+ Y + Sbjct: 59 ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQDK 117 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +P++ + N F + + + + ++L +A Sbjct: 118 KTPVMLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I F T+ + YL T + + F + + Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMEDKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + K + W+ +++++SVFI ++ S + + Sbjct: 228 TYKVTGDNVDNLSAAKDDSQDLPGRIDWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287 Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWGW 338 Y +SA T P T + + G F T+ ++ + R L Sbjct: 288 GYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELHRLVYLGWPLI 347 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + GI +++ T+ VK+L +P K Y+S+A M+ ++PKIDE Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVLVYPATWKTYMSSAKMRVLKPKIDE 407 Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + +K+ + Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R Sbjct: 408 INKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513 + W DL+ D I T +PF H+ ++ ++M+L+ + K + D Sbjct: 468 -FLWADDLSTYD--AIITFPFHIPFLGN---HLSLFCLLMTLTNILNTKYTMSMQDTGAQ 521 Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ E L+ L Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRTTDETKLLAIL 580 Query: 571 RS 572 + Sbjct: 581 EA 582 >gi|237714509|ref|ZP_04544990.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406374|ref|ZP_06082923.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294643254|ref|ZP_06721080.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294806447|ref|ZP_06765288.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229445278|gb|EEO51069.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355077|gb|EEZ04168.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292641377|gb|EFF59569.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294446310|gb|EFG14936.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 617 Score = 213 bits (542), Expect = 6e-53, Method: Composition-based stats. Identities = 106/602 (17%), Positives = 225/602 (37%), Gaps = 50/602 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49 M+ N + L I++ + + + +++ K + Sbjct: 1 MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKRYYDSIAVVQQQEEALKAKTEAAL 58 Query: 50 DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 NS V + AL ++ ++N + KG + L+ Y + Sbjct: 59 ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFATKGGRVYSAMLKDY-MAQDK 117 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +PI+ + N F + + + + ++L +A Sbjct: 118 KTPIMLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I F T+ + YL T + + F + + Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMEDKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + K + W+ +++++SVFI ++ S + + Sbjct: 228 TYKVTGDNVDNLSAAKDDSQDLPGRIDWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287 Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWGW 338 Y +SA T P T + + G F T+ ++ + R L Sbjct: 288 GYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELHRLVYLGWPLI 347 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + GI +++ T+ VK+L +P K Y+S+A M+ ++PKIDE Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVLVYPATWKTYMSSAKMRVLKPKIDE 407 Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + +K+ + Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R Sbjct: 408 INKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513 + W DL+ D I T +PF H+ ++ ++M+L+ + K + D Sbjct: 468 -FLWADDLSTYD--AIITFPFHIPFLGN---HLSLFCLLMTLTNILNTKYTMSMQDTGAQ 521 Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ E L+ L Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRTTDETKLLAIL 580 Query: 571 RS 572 + Sbjct: 581 EA 582 >gi|293370211|ref|ZP_06616771.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|292634708|gb|EFF53237.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Bacteroides ovatus SD CMC 3f] Length = 617 Score = 213 bits (542), Expect = 6e-53, Method: Composition-based stats. Identities = 106/602 (17%), Positives = 225/602 (37%), Gaps = 50/602 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49 M+ N + L I++ + + + +++ K + Sbjct: 1 MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKKYYDSIAVVQQQEEALKAKTEAAL 58 Query: 50 DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 NS V + AL ++ ++N + KG + L+ Y + Sbjct: 59 ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQDK 117 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +P++ + N F + + + + ++L +A Sbjct: 118 KTPVMLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I F T+ + YL T + + F + + Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMENKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + K N W+ +++++SVFI ++ S + + Sbjct: 228 TYKVTGDNVDNLSAAKDDSQNLPGRIDWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287 Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWGW 338 Y +SA T P T + + G F T+ ++ + R L Sbjct: 288 GYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELHRLVYLGWPLI 347 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + GI +++ T+ VK+L +P K Y+S+A M+ ++PKIDE Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVLVYPATWKTYMSSAKMRVLKPKIDE 407 Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + +K+ + Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R Sbjct: 408 INKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513 + W DL+ D I T +PF H+ ++ ++M+L+ + K + D Sbjct: 468 -FLWADDLSTYD--AIITFPFHIPFLGN---HLSLFCLLMTLTNILNTKYTMSMQDTGAQ 521 Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ E L+ L Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRTTDETKLLAIL 580 Query: 571 RS 572 + Sbjct: 581 EA 582 >gi|295083924|emb|CBK65447.1| protein translocase subunit yidC [Bacteroides xylanisolvens XB1A] Length = 617 Score = 213 bits (541), Expect = 7e-53, Method: Composition-based stats. Identities = 104/602 (17%), Positives = 225/602 (37%), Gaps = 50/602 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49 M+ N + L I++ + + + +++ K + Sbjct: 1 MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKRYYDSIAVVQQQEEALKAKTEAAL 58 Query: 50 DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 NS V + AL ++ ++N + KG + L+ Y + Sbjct: 59 ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFATKGGRVYSAMLKDY-MAQDK 117 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +PI+ + N F + + + + ++L +A Sbjct: 118 KTPIMLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I F T+ + YL T + + F + + Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMENKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + K + W+ +++++SVFI ++ S + + Sbjct: 228 TYKVTGDNVDNLSAAKDDSQDLPGRIDWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287 Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWGW 338 Y +SA T P T + + G F T+ ++ + R L Sbjct: 288 GYIKDYSAEMNTFFDPTGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELHRLVYLGWPLI 347 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + GI +++ T+ VK++ +P K Y+S+A M+ ++PKIDE Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKIDE 407 Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + +K+ + Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R Sbjct: 408 ISKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513 + W DL+ D I T +PF H+ ++ ++M+++ + K + D Sbjct: 468 -FLWADDLSTYD--AIITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMSMQDTGAQ 521 Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ E L+ L Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRKTTDETKLLAIL 580 Query: 571 RS 572 + Sbjct: 581 EA 582 >gi|299146179|ref|ZP_07039247.1| inner membrane protein OxaA [Bacteroides sp. 3_1_23] gi|298516670|gb|EFI40551.1| inner membrane protein OxaA [Bacteroides sp. 3_1_23] Length = 617 Score = 213 bits (541), Expect = 8e-53, Method: Composition-based stats. Identities = 103/602 (17%), Positives = 224/602 (37%), Gaps = 50/602 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49 M+ N + L I++ + + + +++ K + Sbjct: 1 MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKKYYDSIAVVQQQEEALKAKTEAAL 58 Query: 50 DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 NS V + AL ++ ++N + KG + L+ Y + Sbjct: 59 ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQDK 117 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +P++ + N F + + + + ++L +A Sbjct: 118 KTPVMLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I F T+ + YL T + + F + + Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMEDKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + K + W+ +++++SVFI ++ S + + Sbjct: 228 TYKVTGDNVDNLSAAKDDSQDLPGRIDWIAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287 Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWGW 338 Y +SA T P T + + G F T+ ++ + R L Sbjct: 288 GYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELHRLVYLGWPLI 347 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + GI +++ T+ VK+L +P K Y+S+A M+ ++PKIDE Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVLVYPATWKTYMSSAKMRVLKPKIDE 407 Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + +K+ + Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R Sbjct: 408 INKKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513 + W DL+ D T +PF H+ ++ ++M+++ + K + D Sbjct: 468 -FLWADDLSTYD--AFITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMSMQDTGAQ 521 Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ E L+ L Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRTTDETKLLAIL 580 Query: 571 RS 572 + Sbjct: 581 EA 582 >gi|330835990|ref|YP_004410631.1| Membrane protein oxaA [Spirochaeta coccoides DSM 17374] gi|329747893|gb|AEC01249.1| Membrane protein oxaA [Spirochaeta coccoides DSM 17374] Length = 604 Score = 213 bits (541), Expect = 8e-53, Method: Composition-based stats. Identities = 121/548 (22%), Positives = 210/548 (38%), Gaps = 27/548 (4%) Query: 30 IEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89 E I + +Q ++ S SP + +N I + + GA Sbjct: 41 PVAEPLEEPAIHMISSTDQAWDTGLPGSFIAIGDNPSRSPFI-FENEEFIITFDPVGASV 99 Query: 90 DDLNLRGYHLDVSSNSPIVTLL---SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLIS 146 + L+ + + P+ L S N Y S Sbjct: 100 SSIKLKKH---LDGKEPVEMLFRSPSDHNAFLLYAGGDRTRPLDTVFSYSVSGNEVTFTR 156 Query: 147 GKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHK 206 + L F + + + K+ T + N + F + + Sbjct: 157 NFAVVGEDGRALPGHFTLTKRFRFGGAGEYLFEIKVGATNSENKAVPLSFDNNAYTLAFE 216 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 PQ + L ++ ++ + I SW + KY++ + IP Sbjct: 217 PQIGPAFEKLDNYNYRRLYIRNDGGKRTQPKLSNGIYQTTAGISWTAVVGKYFSVIAIPD 276 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + + Q + S T + G + + Y K + Sbjct: 277 ATRYTTTLAERSDENSTVPQTSSIYLTRPAVRSASFEDTFLFYIGPQLKQNMDIYNKADS 336 Query: 327 IP------RFEMLIDWGWF-YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 E ++D + ++ + ++ FY ++ N+G+AI+L T+ ++L PL Sbjct: 337 NSFQLSELHLEQVLDTSSWLGWLETILKGVLQLFYKVIPNYGVAIILLTLLTRVLMHPLN 396 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 KK STA M + P++DELR+K+ +P Q L +A LY+ INPL GC P+LLQ P+ Sbjct: 397 KKSMASTARMSALSPQMDELRKKYADNP-QKLNEATAALYRKEKINPLGGCLPMLLQFPI 455 Query: 440 FFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 A+Y +++ E+R A F GWI DL+ D + T LPF + I PI+ + Sbjct: 456 MIALYGLLNKHFELRGAMFIPGWIPDLSVPD--TVLTFSFNLPFLGNQ---LHILPILYA 510 Query: 499 LSMFIQMKMSPPP------ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 SM MK++P ++ MP++ F L + P+GL++YWS N+IS++Q Sbjct: 511 TSMIFSMKLNPSSSGAAGSQASTMKFMMYGMPLILFFTLYNAPSGLLLYWSSVNLISMLQ 570 Query: 553 QAVIMKMH 560 Q K Sbjct: 571 QKFTNKKT 578 >gi|224539444|ref|ZP_03679983.1| hypothetical protein BACCELL_04349 [Bacteroides cellulosilyticus DSM 14838] gi|224518949|gb|EEF88054.1| hypothetical protein BACCELL_04349 [Bacteroides cellulosilyticus DSM 14838] Length = 616 Score = 212 bits (540), Expect = 1e-52, Method: Composition-based stats. Identities = 102/601 (16%), Positives = 225/601 (37%), Gaps = 47/601 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE---------RKNIQTVKQPNQVDN 51 M+ N + L I++ + + + + ++ + +K Sbjct: 1 MD--KNTITGLVLIAILLVGFSFLSRPSKEQLEAQQRYYDSIALVQQREEALKAKADAAL 58 Query: 52 SYAAVLIDDRAQALSMSPR------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + + + +L + R + ++N +++ KG L+ Y Sbjct: 59 ANEKDVETVDSTSLFFNARQGTDSLITIQNDVAELTLSTKGGSIFSAVLKEYME--QDKK 116 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 VTL + ++ + N + + + T ++L +A+ Sbjct: 117 TPVTLFTGNDVSMNFLFY--------NKKETIQTKDYYFTTVNRTDSTVTMRLSADSASY 168 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 I F+ + + + + +D + + + + + + Sbjct: 169 IDFKYALHPNTYLVDFSIDAKGMADKLAASNNYVDIEWAQRARQIEKGYVYENRLSELTY 228 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 Y K E W+ +++++SVFI + + + Y Sbjct: 229 KMLGNGTDYLSANKDDEKEVPERLDWIAFKNQFFSSVFIADADFEKTKLVSKMEREGSGY 288 Query: 286 QAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTI----HHYEKDLAIPRFEMLIDWGWFY 340 +SA T P T F + G + T+ ++ + R L + Sbjct: 289 IKDYSAEMSTSFDPTGKQPTQMFFYFGPNHYKTLTALDKGRDEKWELNRLVYLGWPLIRW 348 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + + GI ++L T+ VK + FP K Y+S+A M+ ++PKIDE+ Sbjct: 349 VNKWFTINIFDWLSGWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKPKIDEIN 408 Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +K+ + Q+ ++ +Y + ++P+ GC P+L+Q PV A++ + ++E+R + Sbjct: 409 KKYPKQEDAMKKQQEVMGMYSQYGVSPMGGCLPMLVQFPVLIALFMFVPSAIELRQQS-F 467 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQ 516 W DL+ D +PF H+ ++ ++M++ + K D Q Sbjct: 468 LWADDLSTYD--AFINFPFNIPFLGS---HLSLFCLLMTVVNILNSKFMMQQQDTGANPQ 522 Query: 517 AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + WM P++ +F L+S+P+GL Y+ S +IS+V +I++ E L+ +L + Sbjct: 523 MAAMKWMTYLMPIMMLFILNSYPSGLNYYYFISTLISVV-TTLILRKTTNEEKLLAQLEA 581 Query: 573 T 573 Sbjct: 582 R 582 >gi|160885689|ref|ZP_02066692.1| hypothetical protein BACOVA_03693 [Bacteroides ovatus ATCC 8483] gi|156108502|gb|EDO10247.1| hypothetical protein BACOVA_03693 [Bacteroides ovatus ATCC 8483] Length = 617 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 106/602 (17%), Positives = 225/602 (37%), Gaps = 50/602 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE-----------EMNNERKNIQTVKQPNQV 49 M+ N + L I++ + + M +++ K + Sbjct: 1 MD--KNTITGLVLIGILLVGFSFLSRPSEEQIAAQKKYYDSIAMVQQQEEALKAKTEAAL 58 Query: 50 DNSYAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 NS V + AL ++ ++N + KG + L+ Y + Sbjct: 59 ANSQKEVASAADSSALFFNALHGTDSKISIQNNVAEITFTTKGGRVYSAMLKDY-MAQDK 117 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNA 163 +P++ + N F + + + + ++L +A Sbjct: 118 KTPVMLFDGDDASMNFNFYNKAGAIQTKD---------YFFEAVNKTDSSVTMRLAADSA 168 Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 + I F T+ + YL T + + F + + Sbjct: 169 SYIDFIYTLK-PDSYLMNFEIKATGMEDKLASTKYVDIDWSQRARQLEKGFTYENRLSEL 227 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 + K + W+ +++++SVFI ++ S + + Sbjct: 228 TYKVTGDNVDNLSAAKDDSQDLPGRIDWVAFKNQFFSSVFIAEQDFDKVSVKSKMEQQGS 287 Query: 284 RYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWGW 338 Y +SA T P T + + G F T+ ++ + R L Sbjct: 288 GYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELHRLVYLGWPLI 347 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + GI +++ T+ VK+L +P K Y+S+A M+ ++PKIDE Sbjct: 348 RWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVLVYPATWKTYMSSAKMRVLKPKIDE 407 Query: 399 LREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + +K+ + Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R Sbjct: 408 INKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQS 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---- 513 + W DL+ D I T +PF H+ ++ ++M+L+ + K + D Sbjct: 468 -FLWADDLSTYD--AIITFPFHIPFLGN---HLSLFCLLMTLTNILNTKYTMSMQDTGAQ 521 Query: 514 ---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ E L+ L Sbjct: 522 PQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRRTTNETKLLAIL 580 Query: 571 RS 572 + Sbjct: 581 EA 582 >gi|326336217|ref|ZP_08202389.1| inner membrane protein OxaA [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691726|gb|EGD33693.1| inner membrane protein OxaA [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 616 Score = 212 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 116/614 (18%), Positives = 230/614 (37%), Gaps = 59/614 (9%) Query: 1 MERNWN---YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 ME + + L II+ + Y + + T Q DN A + Sbjct: 1 MEEKRTNIYSLIGMMLMFIILMYYM--YNHQPTKPNTQTSTKETTQVQKTSTDNVPTATI 58 Query: 58 IDDRAQ------------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL 99 D + + E++N L ++ KG Q +L ++ Sbjct: 59 PTDSLELSKYQEQLGAFGYSAVLPSAKEGSYTEIENELLKLKVSNKGGQIIELLVKNQKT 118 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 V L+ +N + ++T +N L + + + T +KL Sbjct: 119 YQG---KPVYLVKDNNA-----SFSIELATNDNRTLHTKDLYFEPS---LSGNTLSMKLK 167 Query: 160 FKNANNILFERTISLDEH--YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + + + +E+ ++N + + + + Sbjct: 168 VSATQYLEYTYMLHPNEYLLDFSIHSVGLSNVLNTGKVPVLSWNLTARRMEKSVTYEDRY 227 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 I D + + H W+ ++S I K + Sbjct: 228 VQAIVQYEDNRDDKLSAGGEDSEEFKQIH----WIDFKQHLFSSFLITDKPFATGKLSSK 283 Query: 278 LSDGHA----RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 R FSA I+ + + G ++ + Y+K+ + + + Sbjct: 284 NLANSEGENVRKTKDFSAVFPIAYNSGEISESLHFYYGPSDYHLLKKYDKEYELTK-AIP 342 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + WG F +I K + + F + + G+AI++ T+ V++L P+ K Y+S A MK ++ Sbjct: 343 LGWGIFGWINKWFVIPVFDFLSKFMSMGLAIIVLTIIVRILLSPVQYKSYLSQAKMKVLR 402 Query: 394 PKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 P+I+E+ K+K Q+ + LY +NPL+GC P LLQ+PVFFA++ + Sbjct: 403 PEIEEINNKYKGQENAMKRQQETMALYSKAGVNPLSGCIPALLQMPVFFALFSFFPTAFM 462 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 +R + W DL++ D +I L +PFY HV ++PI+ S+++ I M M+ Sbjct: 463 LRQES-FLWANDLSSYD--SIAQLPFSIPFYGN---HVSLFPILASVTLLIYMLMTAGQT 516 Query: 513 DKGQAM-------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + Q ++ P++ +F +++ +GL +Y+ SN+I+I I + Sbjct: 517 QQPQQEGMPNMKFMMYISPLMMLFFFNNYASGLSLYYFISNLITIFIMLAIKYWIIDDKR 576 Query: 566 LIDRLRSTFSKNYN 579 + +++ K Sbjct: 577 IHAKIQENKQKPRK 590 >gi|86140337|ref|ZP_01058896.1| putative inner membrane protein translocase component YidC [Leeuwenhoekiella blandensis MED217] gi|85832279|gb|EAQ50728.1| putative inner membrane protein translocase component YidC [Leeuwenhoekiella blandensis MED217] Length = 621 Score = 212 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 112/602 (18%), Positives = 229/602 (38%), Gaps = 72/602 (11%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--------------KNIQTV 43 ME + L I+ + + P EE+ ++ K QT Sbjct: 1 MEEKKFDKQSMIGFLLIGAILL-FMLWQNQPTEEELAAQKAQEEQVEAQEAAAEKASQTD 59 Query: 44 KQPNQVDNSYAAVLID-----------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 ++ ++ + EL+N L ++ KG + Sbjct: 60 AVVESTTPQNDSLALERYKATLGSFAYSATLPSATDDVTELENDVLALKVSNKGGFITEA 119 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L+ + S +S V L+ N+ + + + NS ++ S Sbjct: 120 RLKNFK---SYDSVPVYLIKDGNS------RFNLTFSTTDNRTLNSENLYFEPSLSKEGE 170 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFK----IVDTVTNNSIDQIRFSPRGRIMRHKPQ 208 + + K +++ E +L + N + ++ ++ Sbjct: 171 NQVLSMKLKVSDSEYLEYRYTLTPDDYMMGFGIKTVGLQNVVNTSQPINLDWQLKGYRHA 230 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 + + + + W +++S+ + + Sbjct: 231 KSITYENRYTRLTYEYEEGDHDKLD----QTGDDDAIETDVDWFNFRQHFFSSILLTDQP 286 Query: 269 TSFHSQFKYL----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 + Y +++AN + + G ++ +++Y++D Sbjct: 287 FDEVRFSSKNLVEDEEVDTVYTKQYAANMTLKPVNGELNYAMDFYYGPTDYQILNNYDRD 346 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG--IAIMLTTVFVKLLFFPLAKKQ 382 + + + GW F ++++ +F L+ F IAI+L T+ +KLL P+ KQ Sbjct: 347 I-----DEAMPLGWGIFGVINKYLIIPFFNFLIAYFPAGIAIILLTISIKLLLSPVQYKQ 401 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 Y+S MK ++P+I+E+ EK+ +P + Q+ ++LY +PL+GC P LLQIPVF+A Sbjct: 402 YLSQGKMKVLRPEINEINEKYADNPMKK-QQETMKLYSKAGASPLSGCIPGLLQIPVFYA 460 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 ++ + +RH + W DL++ D I L +PFY HV ++PI+ S+++F Sbjct: 461 LFTFFPSAFALRHKS-FLWADDLSSYDK--IADLPFHIPFYG---DHVSLFPILASIAIF 514 Query: 503 IQMKMS--------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 I M M+ P ++ P++ +F +++ +GL +Y+ SN+I+I Sbjct: 515 IYMTMTTGQSMQQTQQPGMPNMKFLMYLSPIMMLFFFNNYASGLSLYYFISNLITIGIML 574 Query: 555 VI 556 VI Sbjct: 575 VI 576 >gi|332668063|ref|YP_004450851.1| membrane protein oxaA [Haliscomenobacter hydrossis DSM 1100] gi|332336877|gb|AEE53978.1| Membrane protein oxaA [Haliscomenobacter hydrossis DSM 1100] Length = 634 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 114/615 (18%), Positives = 214/615 (34%), Gaps = 48/615 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL I+ AWQ F + + +R + D+ + Sbjct: 1 MD--RNNIIGIALIFILFLAWQYFLAPSKTQIAAQQRAQDSIARVERLRDSLAIVKKQEA 58 Query: 61 RA--------------------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNL 94 R A+ L+N + + + KG + D+ + Sbjct: 59 REKIKAAAEVPDSVRTQMLGGQYGPFANAAVGKEETTVLENDLIKVTFSNKGGKIQDVLV 118 Query: 95 RGYHLDV---SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151 + Y V + L + KN + L N + + N + Sbjct: 119 KKYFKMVQGEDRKDRKIPLHLLDDVKNRFEYTLPVKGLRNGVNTADLYFEVNNTGNSVTF 178 Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 + L T LD F+ +D V S I + + + T Sbjct: 179 RADAGNGQYFAQTYSLPSNTYKLDYRLEFEGMDQVFEASAKNITLKWVNYLDKIEKAT-- 236 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + Q + + E S W+ +++++ S + K + Sbjct: 237 -QYERQYSSLNFKAIDENSGRCSPTREYSEKDAEGAPIQWVANTNQFFNSSLLSEKGFTS 295 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSIT-TTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + + G+S + G EF +H ++ Sbjct: 296 AKMASKNLPEENEDLKELKSEIQVPFKGESSEQFAMHFYIGPNEFDRLHKM--GYSLSDV 353 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + L S+ L+ + GI I++ T VKLL FPL + S + M Sbjct: 354 VPFGQNIMGTINRWVIRPLFSFLTWLISSKGIVILMLTFMVKLLLFPLTYRMIYSQSKMT 413 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++P+I+ L+E++ Q +Q + +Y+ +NPL C+P+LLQ+P++FA+Y+ S Sbjct: 414 ALKPEIERLKERYGD-DQQKVQMETMSMYREFGVNPLGACFPMLLQLPIWFALYRFFPAS 472 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 +E R A + W DL++ D F L +PF H+ ++ ++ LS + + Sbjct: 473 IEFRQAS-FLWATDLSSYD--EFFQLPFNIPFGFGE--HISLFALLWVLSTLLYTWYNSK 527 Query: 511 PAD----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 D + MPV+F+ +S +GL Y +SN+++I Q K + Sbjct: 528 NMDFSANPSMLYMQYIMPVLFMGFFNSSASGLSAYMLFSNLLNIGQTLA-TKYFLIDEKK 586 Query: 567 IDRLRSTFSKNYNSQ 581 + + K + Sbjct: 587 LKLKMDDYRKKPKKK 601 >gi|149176568|ref|ZP_01855181.1| hypothetical protein PM8797T_30327 [Planctomyces maris DSM 8797] gi|148844681|gb|EDL59031.1| hypothetical protein PM8797T_30327 [Planctomyces maris DSM 8797] Length = 707 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 125/630 (19%), Positives = 226/630 (35%), Gaps = 94/630 (14%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS--------- 52 + + LS +++ WQ F + K P D Sbjct: 1 MEQKRLLLFVTLSASMLFFWQLFINPKIAPPPAAQNVVENDAKDPQGADAPLVAKKPDLP 60 Query: 53 -----YAAVLIDDRAQALSMSPRV----ELKNPS---LIGSINLKGAQFDDLNLRG--YH 98 A+ L R L S L I+ GA + +L Y Sbjct: 61 GADKGAEVKPAPPEAELLKNPQRTILLGSLDPDSGYFLQTKISTTGASLVEAHLNDPLYR 120 Query: 99 LDVSSNSPIVTL--------------------------LSPSNTKNAYFAELDYVSTANN 132 + P+ L L+ + + Sbjct: 121 DLNNPKQPLKILGEFAAGKDFKRSLDLNVAQLDAKLAALNTDCHSANWKVLELVKDPDDP 180 Query: 133 IELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSI 191 + G I + F D+ Y+ V N+S Sbjct: 181 KLYQSVLLSLTAPDGSIEVQKKYELKKYPVPEGKDFREFRDTDQAGYMVHFDIKVVNHSQ 240 Query: 192 DQIRFSPRGRIMRHKP-QTATNTFGVQEGFIAVLGDKSLVEQKYS-------DIEKSSIS 243 + + P + A NT ++ I L D VE + ++ + Sbjct: 241 AAQKLDYQLLGPIGIPLENAENTRKYRDLRIGFLQDDKSVETEIFTAPDIIENVNAQQVE 300 Query: 244 NFHESNSWLGISDKYWASVFIPSK--------ETSFHSQFKYL-----------SDGHAR 284 + + + G+ +Y+A++ P S + + +R Sbjct: 301 KYSRAFQYAGVDIQYFAALLTPDGKNYDPQLVNGEMQSNYSASIEPVLVQRGLRDETQSR 360 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 + ++ ++ + PG IT + ++ G K + I G F +AK Sbjct: 361 ITVQVNSKDLDLAPGGDITHSYAMYTGPKRESLLGPPLNATEIMDL------GIFGPVAK 414 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 M L++ + ++GIAI+ T+ V+ +PL++KQ + MK +QP+I EL++K+ Sbjct: 415 LMLWLLTTLHGFGLSYGIAIICLTIIVRGSLYPLSRKQAIGAQKMKELQPQIAELKKKYG 474 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 + L +A ++L+ +N NPLAGC PI +Q+P+FF +Y ++ ++++R P + W+ + Sbjct: 475 DDREK-LGRAQMELFSKNNYNPLAGCLPIFMQLPIFFGLYTALNNAVQLRGTP-FLWVDN 532 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQA---MIL 520 LAA D +F + +PF F + PI+ +Q K+ PPP DK Q I+ Sbjct: 533 LAAPD--ALFQMPFAIPFLGDQF---NLLPIVTVGLFVMQQKLFMPPPTDKDQELQHKIM 587 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 N+M + F PAGL +Y+ S++ I Sbjct: 588 NYMMIGMGFMFYHVPAGLCVYFIASSLWGI 617 >gi|300727271|ref|ZP_07060687.1| putative membrane protein [Prevotella bryantii B14] gi|299775509|gb|EFI72103.1| putative membrane protein [Prevotella bryantii B14] Length = 641 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 109/616 (17%), Positives = 231/616 (37%), Gaps = 52/616 (8%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY---------- 53 N N I L +++ + +Y P EE+ +++ + ++ + Sbjct: 2 NKNNITGIVLIALLIIGYG-WYTQPSEEEIKAQQEQLAKQEEAKKKTEKAFKDAEKAKQE 60 Query: 54 -------AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------LD 100 + + V L N + ++N KGA + ++ Y D Sbjct: 61 AAKAKILEDTTALFHSALNGKAQTVTLHNDKIELTLNTKGATVEKAVIKNYVGHNIQVKD 120 Query: 101 VSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 S + VTL + + A+ + T+ + T ++ P IKL Sbjct: 121 GSKDQDKVTLFDQKDQALKFMLSAKEANIVTSELYFTASEVTDSTVVFTAEAAPGKNIKL 180 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 + + + +S++ +T T + R + R + + AT T+ Sbjct: 181 SYVLGKDYMLHMQLSVNGMSGIFAPNTNTMDVDWAERCRQQERGFSFENRYATLTY--HN 238 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 E E W+ +++++SV I + ++ + Sbjct: 239 TEGGTDYLNETKEAIDEK--------IEEKVDWVAFKNQFFSSVMIAKNDFQENALMTSI 290 Query: 279 SDGHARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEML 333 K ++ P + + G +F + E + + + L Sbjct: 291 PQDKESGYLKQYQAKLKTFFDPTGKQPSEFDFYYGPNDFRLLQKVESESNFGKDLELQRL 350 Query: 334 IDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + GW F + + F L V GI ++L T+ +K++ +P+ KK Y+S+A M+ Sbjct: 351 VYLGWPLFRIINRWFTLYVFDWLSQVFPMGIVLILITLLLKVITYPMVKKSYMSSAKMRV 410 Query: 392 IQPKIDELREKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++PK++E +++ + Q Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + + Sbjct: 411 LKPKLEEATKQYDKPEDQMKKQQAMMAEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNA 470 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMKMS 508 +++R + WI DL+ DP + + + I+ S Q K Sbjct: 471 IQLRGES-FLWINDLSTYDPIFEWGTNLWMLGDHISLTCILFCGANILYSWFTMQQQKDQ 529 Query: 509 PPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q ++ W MP++F F + + AGL Y+ S S + + + Sbjct: 530 MVGQQAEQMKMMRWMMLLMPLMFFFMFNDYSAGLNFYYFVSLFFSAAIMWTL-RKTTNDE 588 Query: 565 GLIDRLRSTFSKNYNS 580 L+ L + + +N + Sbjct: 589 KLLQILEARYKENKTN 604 >gi|332293587|ref|YP_004432196.1| membrane protein insertase, YidC/Oxa1 family [Krokinobacter diaphorus 4H-3-7-5] gi|332171673|gb|AEE20928.1| membrane protein insertase, YidC/Oxa1 family [Krokinobacter diaphorus 4H-3-7-5] Length = 628 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 110/610 (18%), Positives = 222/610 (36%), Gaps = 64/610 (10%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA- 64 N + + L I+ W ++ P EE+ ++ Q + D + V+ A A Sbjct: 8 NSLIGMLLMGGILV-WIIYFNKPTPEEIEAQKAAQTEQLQETEDDVAALPVMDAAPAIAT 66 Query: 65 -----------------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 + N L ++ KG ++ L + Sbjct: 67 DSLSNVALQNRLGTFAYSGSLPSAKEGATTTIANDVLELKVSNKGGYITEVKLLKHSTF- 125 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 +S V L+ N+ + + + + N+ ++ + + + K Sbjct: 126 --DSIPVYLIKDGNS------QFNVSFSTADNRNLNTKDLFFEPTLSKNGGNDVLSMKLK 177 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 + + E L E + ++ S R+ E Sbjct: 178 VSPSEYLEYRYELKEGDYMMDFGMKSQGLSSRLNTSNPMRMQWDFKGMRHARSQSYENRY 237 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL--- 278 L K ++ E W+ +++S+ I Sbjct: 238 TRLTYKYEEDKTDKLSPAGDDDEIEEDLVWMNYRQHFFSSMLISKTPFKEARLSSTDLYK 297 Query: 279 ----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 D + ++ ++ + + ++ G ++ + Y++ L M + Sbjct: 298 EADDRDEATIFTKEYKSDVLLEAKNGELDYAMQMYYGPTDYTILKSYDQGLDEA---MPL 354 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 WG F F+ K + + F GIAI++ T+ +KLL P+ KQY S A MK ++P Sbjct: 355 GWGIFGFLNKYLVIPFFAFLTGFLPAGIAIIVMTISIKLLLSPVQYKQYTSQAKMKILKP 414 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +I + EK K + + Q+ + LY +P AGC P LLQIPVF+A++ + ++R Sbjct: 415 EIAAISEKHKDNAMKK-QQETMALYSKAGASPAAGCLPALLQIPVFYALFTFFPSAFDLR 473 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPP 511 + W DL++ D I L +PFY HV ++PI+ ++++F M++ + Sbjct: 474 GKS-FLWADDLSSYD--EIAKLPFEIPFYG---DHVSLFPILAAVTIFFSMRLTTGNQQM 527 Query: 512 ADKGQAMI----------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 Q + + + P++ + + + +GL +Y+ SN+++I VI Sbjct: 528 QQPTQEGMPDMSKMMKYMMYFSPLLMLVFFNQYASGLSLYYFISNLLTIGIILVIKNFII 587 Query: 562 AEIGLIDRLR 571 E + ++ Sbjct: 588 DEEKIKAKIE 597 >gi|304382921|ref|ZP_07365403.1| inner membrane protein OxaA [Prevotella marshii DSM 16973] gi|304335946|gb|EFM02194.1| inner membrane protein OxaA [Prevotella marshii DSM 16973] Length = 631 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 107/614 (17%), Positives = 237/614 (38%), Gaps = 51/614 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + L ++ + +Y P EE+ + Q D Sbjct: 1 MD--KNTIIGFVLIAAVLIGFS-WYSQPSAEEIAAQHTQDSLTLVAKQRAEKQQKAAEDA 57 Query: 61 RAQALSM-----------------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 R + L+ + + LKN + +++ KG ++ + + Sbjct: 58 RKKTLTSVAKEDTTVLFYASMKGTAQNIVLKNSKVELTLSTKGGTVAKAVIKNFKDHNGN 117 Query: 104 NSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 VTL + + + + + + T + P+ T + I L + Sbjct: 118 KD--VTLFTEKDQRLNFLLAGKNSNIITEDLFFTPSQVTDSTVTMTATTGRGQAIVLHYL 175 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 + + ++ ++ + + + + R + + +T T+ + +G Sbjct: 176 LGKDYMLHASMQVNGMADLFAPTYRSMDVEWTDKARQQERGFTFENRYSTLTYHLTKGGT 235 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKET-SFHSQFKYLSD 280 L S + + E+ W+ ++++++V I + + Sbjct: 236 DYLNATSEKKDE----------PVEETIDWIAFKNQFFSAVMIAKNDFAPNSLMTSIPQE 285 Query: 281 GHARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDW 336 + Y ++A T P T + G +F + E+ + + L+ Sbjct: 286 KGSGYLKDYAAKAKTFFDPTGKTPTEFEFYFGPNDFRLLQSIEQQSKFGKDLELQRLVYL 345 Query: 337 GWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 GW F + + F L N GI ++L T+ +KL+ FPL KK Y+S+A M+ ++ Sbjct: 346 GWPLFRIINRWFTLYVFDGLTAMNINMGIVLILITLLLKLITFPLVKKSYMSSAKMRVLK 405 Query: 394 PKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 PK+DE +++ + Q+ Q+AM+ +Y + ++PL+GC P+L+Q+P++ A++ + +++ Sbjct: 406 PKLDEATKQYDKPEDQMQKQQAMMTMYSKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQ 465 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKMSPP 510 +R + WI+DL+ DP + L + + ++ S+ Q + Sbjct: 466 LRGES-FLWIQDLSTYDPIWEWHDSLWLIGDHLSLTCILFCVANVLYSIMTMRQQRDQMV 524 Query: 511 PADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 Q ++ MPV+F F + + +GL Y+ S S + + + L Sbjct: 525 GQQAEQMKVMQYMMYVMPVMFFFMFNDYSSGLNFYYFVSLFFSAAIMWAL-RRTTNDEKL 583 Query: 567 IDRLRSTFSKNYNS 580 + L + + +N N+ Sbjct: 584 LAILEANYQENKNN 597 >gi|150025942|ref|YP_001296768.1| inner membrane protein translocase component YidC [Flavobacterium psychrophilum JIP02/86] gi|149772483|emb|CAL43966.1| Inner membrane protein OxaA [Flavobacterium psychrophilum JIP02/86] Length = 633 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 113/615 (18%), Positives = 230/615 (37%), Gaps = 56/615 (9%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEE----MNNERKNIQTVKQPNQVDNSY 53 ME+ N + L I+ W + P E E + NS Sbjct: 1 MEKKKLDLNSIIGFVLIFGIMM-WIMYQNKPTQAEIDKKAKQELTEKTKSEANQVAKNSQ 59 Query: 54 AAVLIDDRAQ-----------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 +L D Q + S L+N L+ I KG + L+ Sbjct: 60 KTILPTDSVQVAKMKATLGSFAYSATLPSAKSEFTTLENELLVLKIANKGGYIAEATLKN 119 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 + + +V L+ +N A L+ + N+ ++ + + + Sbjct: 120 FKQISKDSGKLVQLIKDNN------AGLNITLQTQDNRTLNTKDLFFEPTLTKVGTNQIL 173 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 + K N E L + D + + + + + Sbjct: 174 SMKLKAGANQFLEYKYVLKPNDYMLDFDVHSQGLASVLNTTKPADLEWDLKSYRSEKSIS 233 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 E + + + + + + +++ +++S+ + + + Sbjct: 234 NENRFTDIRYEYEDGKHNNVGQGKDKEETLDKVTYVAFKQHFFSSILLTNTPFEKAKLYS 293 Query: 277 YL----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 G Y F AN + + G ++ + Y K+L + Sbjct: 294 SNVVDEEKGDTIYTKHFKANVPLAFNNGEVDYKMNWYYGPSDYKLLKDYHKNLEKI---I 350 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + WG F +I +FM + F + + GIAI++ TV +K+ P+ K ++S A MK + Sbjct: 351 PLGWGIFGWINMFIFMPLFGFLSSYISLGIAIIVFTVIIKIAMSPITYKSFLSQAKMKVL 410 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 +P+I+EL EKF + P + Q+ ++LY +NP+AGC P L+QIP +A ++ ++E Sbjct: 411 RPEINELNEKFSKDPMKK-QQETMKLYNKAGVNPMAGCIPALIQIPFMYASFQFFPSAIE 469 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMS--- 508 +R + W +DL++ D + + +P + HV ++ ++ ++++F KM+ Sbjct: 470 LRQKG-FLWSQDLSSFD--TVLSWKQHIPIISSVYGNHVSLFALLAAIAIFFYTKMTAGD 526 Query: 509 PPPADKGQ------AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q A I+ M P++ + +++ +GL +Y SNVI+I VI + Sbjct: 527 QQMQAPQQEGMPDMAKIMKMMLYISPIMMLIFFNNYGSGLSLYTLISNVITIGIMFVIKR 586 Query: 559 MHGAEIGLIDRLRST 573 + +++ Sbjct: 587 YIVDNDKIHAQIQEN 601 >gi|283954517|ref|ZP_06372036.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 414] gi|283793921|gb|EFC32671.1| inner membrane protein, 60 kDa [Campylobacter jejuni subsp. jejuni 414] Length = 454 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 125/493 (25%), Positives = 235/493 (47%), Gaps = 53/493 (10%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN 131 ++++ I+ G + L+ + + L++ N+ Y E+ + + Sbjct: 4 KVQSKHFEAQIDSFG-RISAFYLKD-KKYQNDKGEFINLINKENS--PYPLEMRFSDPSV 59 Query: 132 NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSI 191 N E + V N+ + + + + + +N + + E+ I+ ++I ++ N+ Sbjct: 60 NSEAFKTPYVANINNLFVDENGSQVLKLTQNLSGLKIEKNITFYAKGSYEIEVKLSKNAN 119 Query: 192 DQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251 ++P A +++ V + + + + S++N ++++ Sbjct: 120 -------YFISPGYRPNIAVDSYTVHGALVMDSKETIETYEDGDVEKDESVNNVVMTSAF 172 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 D+Y+A+ F +K S + + G Sbjct: 173 ----DRYYAT------------FFYNFDKPLNVVISKDSNKNPIVFAYSDNEFKAGGYIG 216 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 +KE + + PR E ++++GWF FIAKPMF + + + +GN+G AI++ T+ V Sbjct: 217 SKEHVILRSID-----PRLEAVVEYGWFTFIAKPMFEFLDFLHQYIGNWGWAIVVMTLIV 271 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 +++ FPL K +S +K++ PK+ ++RE++K PQ + M++LYK H NP++GC Sbjct: 272 RIVLFPLTYKSMISMNKLKDLAPKMKDIRERYKG-DPQKMNMHMMELYKKHGANPMSGCL 330 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 PILLQIP+FFAIY+V+ ++E++ AP+ W+ DL+ DP Sbjct: 331 PILLQIPIFFAIYRVLLNAIELKAAPWAFWVHDLSVMDPYF------------------- 371 Query: 492 IWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 I PI+M +MF+Q ++P D QA I+ ++PV+F F +FPAGL +YW +N+ S+ Sbjct: 372 ILPILMGATMFLQQLITPMAIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFINNLCSL 431 Query: 551 VQQAVIMKMHGAE 563 VQQ VI K+ E Sbjct: 432 VQQWVINKIFAKE 444 >gi|162450792|ref|YP_001613158.1| inner-membrane protein [Sorangium cellulosum 'So ce 56'] gi|161161374|emb|CAN92679.1| probable inner-membrane protein [Sorangium cellulosum 'So ce 56'] Length = 594 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 117/594 (19%), Positives = 230/594 (38%), Gaps = 78/594 (13%) Query: 10 AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSP 69 + L + I+ +Q + P + + + QP V++S A + Sbjct: 9 WLFLGLAIILFFQ--FGKPLLFGESAPQ------LQPLDVNDSTAPAERAPPEMCV---- 56 Query: 70 RVELKNPSLIGSINLKGAQFDDLNL--RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 + ++ G L + Y + L++ S ++ Sbjct: 57 ---IDGDRFKAELSTHGGSLRHLWMTDPKY-TTGDGERRPMDLVTTSLESRMPLRTDLHL 112 Query: 128 STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVT 187 + ++P + W L + + + + L + + + + TV Sbjct: 113 PGGSAQQVPFDDLDWKLSA----QDGKSCTFTYVDDSTRLTKVVAATGRPFELSVQMTVE 168 Query: 188 NNSIDQI-------RFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS-----LVEQKYS 235 N + + + S R + + + + + + Sbjct: 169 NLAQEPRKHRLAVEQTSWRTQKETEGHLGMISEWITETVAATDQKTERQLPDAFEPGDFK 228 Query: 236 DIEKSSISN--FHESNSWLGISDKYWASVFIPSKETSFHS---------------QFKYL 278 D E ++ + + +S Y++ + IP + + Sbjct: 229 DPEFTAERWRRTPGNARFAAVSSSYFSKIAIPLEGPGQPTAETQIEDIWESSKFQDKSKD 288 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + Y+A+ + E + PG ++T F G KE + + ++ +I+ GW Sbjct: 289 PNFGHVYRARLAYPEHELAPGGAVTYKLLSFTGPKERDLLAAVDHGVS-----EVINLGW 343 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F IAK + + Y VG++G AI+L T+ V+LL FPL+ +Q S A M+ ++P++DE Sbjct: 344 FSPIAKLLVSYLYVLYGAVGSWGWAIVLLTITVRLLLFPLSIQQIKSAAAMRKLKPEMDE 403 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNI-NPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + ++K Q AM +L++ + + NP+ GC+P+LLQ+PV+FA+Y + ++E+ H P Sbjct: 404 INARYKDDAAQRGL-AMQELWRKNKVANPVVGCFPMLLQMPVWFALYTALQTAVELYHTP 462 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F I DL+A I PI++ S FIQ K+ PP D Q Sbjct: 463 FGPVIPDLSAPGRYY-------------------IIPIVLGGSSFIQQKLMPPQGDPAQQ 503 Query: 518 MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 ++ + MP +F + PAGL +Y + + I QQ ++ + A+ + Sbjct: 504 KMMLYLMPGIFTAMMLFLPAGLGVYMLTNTWLGIGQQVLVERYLKAKNERAGGI 557 >gi|255691546|ref|ZP_05415221.1| inner membrane protein OxaA [Bacteroides finegoldii DSM 17565] gi|260622938|gb|EEX45809.1| inner membrane protein OxaA [Bacteroides finegoldii DSM 17565] Length = 617 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 104/603 (17%), Positives = 228/603 (37%), Gaps = 52/603 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + L I++ + F P E++ +++ ++ Q + + A Sbjct: 1 MD--KNTITGLVLIGILLVGFS-FLSRPSEEQIAAQKRYYDSIALVQQQEEALKAKTEAA 57 Query: 61 RAQALSM------------------SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 A + +V ++N + KG + L+ Y + Sbjct: 58 LANSKKEAASAADSSSLFFNALQGTDSKVSIQNNVAEITFTTKGGRVYSAMLKDY-MAQD 116 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 + +V + N F + + + + ++L + Sbjct: 117 KKTSVVLFDGDDASMNFNFYNKEGAIQTKD---------YFFEVANKTDSSVVMRLAADS 167 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 A+ I F T+ + YL T + + + + F + Sbjct: 168 ASYIDFIYTLK-PDSYLMNFEIKATGMTDKLANTNYVDIDWSQRARQLEKGFTYENRLAE 226 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + K W+ +++++SVFI ++ S + Sbjct: 227 LTYKIKGDDVDNLSAAKDDSKTLESRIDWVAFKNQFFSSVFIAEQDFDKVSVKSRMEQQG 286 Query: 283 ARYQAKFSANEITIL-PGKSITTTNFLFAGAKEFPTIH----HYEKDLAIPRFEMLIDWG 337 + Y +SA T P T + + G F T+ ++ + R L Sbjct: 287 SGYIKDYSAEMNTFFDPSGKEPTEMYFYFGPNHFKTLKALDKGRDEKWELNRLVYLGWPL 346 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + + + GI +++ T+ VK++ +P K Y+S+A M+ ++PKID Sbjct: 347 IRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKID 406 Query: 398 ELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E+ +K+ + Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R Sbjct: 407 EINKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQ 466 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--- 513 + W DL+ D I T +PF H+ ++ ++M+++ + K + D Sbjct: 467 S-FLWADDLSTYD--AIITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMSMQDNGA 520 Query: 514 ----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ E L+ Sbjct: 521 QPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRKTTDETKLLAI 579 Query: 570 LRS 572 L + Sbjct: 580 LEA 582 >gi|260911838|ref|ZP_05918405.1| inner membrane protein OxaA [Prevotella sp. oral taxon 472 str. F0295] gi|260634049|gb|EEX52172.1| inner membrane protein OxaA [Prevotella sp. oral taxon 472 str. F0295] Length = 627 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 115/609 (18%), Positives = 234/609 (38%), Gaps = 50/609 (8%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N N + L +++ + + P EE+ +++ Q K+ + A +RAQ Sbjct: 2 NKNNLIGFILIGLVLVGFSLW-NRPSEEELAKQQQKEQIEKKNKEEQTKAKAKTDAERAQ 60 Query: 64 ALSMS----------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI 107 AL + + LKN L ++ KG D + + + Sbjct: 61 ALQQATTDTSALFHKALTGEAKSIVLKNSKLQLQLSTKGGVVDKAVISNFTDRNGNKDLT 120 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 + + + + YVSTA+ + T + + + + N + Sbjct: 121 LFQGKDQSLTYTFATKDGYVSTADLFFTASDVTDTTVTFTAEAAAGKTLTIKYVLGNEYM 180 Query: 168 FERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDK 227 +IS T + Q R + + + + + A+ T+ EG L + Sbjct: 181 LHTSISATGMGGILNPSINTVDINWQERCAQQEKGFTFESRYASLTYHNTEGGTDYLSET 240 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 S + + W+ ++++++V I + ++ + Sbjct: 241 SEKIDE----------VIEDKIDWVAFKNQFFSAVMIAKTDFGTNATLTSIPQEKGSGYL 290 Query: 288 KFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWFYFI 342 K ++ T P + T + G +F + E + E L+ GW F Sbjct: 291 KQYQAKLKTTFDPTGAQPTQLDFYYGPNDFRLLQKMESQSHFGKDLELERLVYLGWPLFR 350 Query: 343 AKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + + F L N G+ ++L T+ +K + FPL KK Y+S+A M+ ++PK++E Sbjct: 351 IINRWFTLYVFDWLTGLDINMGVVLILITLLLKFITFPLVKKSYLSSAKMRVLKPKLEEA 410 Query: 400 REKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++F + Q Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + ++++R Sbjct: 411 TKEFNKPEDQMKKQQAMMSEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGES- 469 Query: 459 WGWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + WI DL+ DP NI+ + L F + +M Q + Sbjct: 470 FLWIDDLSTYDPVLEWGHNIWLIGDHLSLTCILFCLSNVLYSMM---TMRQQRDQMVGQQ 526 Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 Q ++ WM PV+F F + + +GL Y+ S S + + + L+ Sbjct: 527 AEQMKMMQWMMYLMPVMFFFMFNDYSSGLNFYYFVSLFFSAAIMWFL-RKTTNDEKLLSS 585 Query: 570 LRSTFSKNY 578 L + + + Sbjct: 586 LEANYKEAQ 594 >gi|323345690|ref|ZP_08085913.1| inner membrane protein OxaA [Prevotella oralis ATCC 33269] gi|323093804|gb|EFZ36382.1| inner membrane protein OxaA [Prevotella oralis ATCC 33269] Length = 629 Score = 211 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 113/612 (18%), Positives = 246/612 (40%), Gaps = 48/612 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + L ++++ + + E RK+ + + + + Sbjct: 1 MD--KNNIIGFVLIAVVLFGYTWWSQPSAEERAAAVRKDSVAAAEKEKAEILKKQKTLQM 58 Query: 61 RAQA----------------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 +A++ S ++ LKN L ++N KGA + +RG+ + Sbjct: 59 QAESKEKELEDTSALFHAALQGQSEKIILKNNKLELTLNSKGATVEKAVIRGFKDR--NG 116 Query: 105 SPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 + VTL ++ Y A+ +STA+ +P+ T + I L ++ Sbjct: 117 NANVTLFDAADQYMNYTLTAKETNISTADLFFVPSDVTDSTVTFTAQAGNGKNITLAYRL 176 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 + L +S++ +T T + + + + + + + AT T+ EG Sbjct: 177 GTDYLLSMKMSVNGMAGLFAPNTNTMDVDWKDKCRQQEKGFTFENRYATLTYHNVEGGTD 236 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 L + ++ + W+ ++++++V I S +S + Sbjct: 237 YLNETK----------ENVDETIEDKIDWVAFKNQFFSAVMIAKNNFSANSMMTSIPQEK 286 Query: 283 ARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWG 337 K ++ P + + + G +F + E + + + L+ G Sbjct: 287 GSGYLKQYEAKMKTFFDPSGKMPSEFEFYYGPNDFRLLQRIETESTFGKDLQLQRLVYLG 346 Query: 338 WFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W F + + F L V G+ +++ T+ +KL+ +P+ KK Y+S+A M+ ++PK Sbjct: 347 WPLFRIINRWFTIYVFDWLSKVFPMGVVLIMITLLLKLITYPMVKKSYMSSAKMRVLKPK 406 Query: 396 IDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +D +F + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + ++++R Sbjct: 407 LDAATAQFNKPEDQMQKQQAMMSEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLR 466 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKMSPPPA 512 + WIKDL+ DP + L + + ++ S Q + A Sbjct: 467 GQS-FLWIKDLSTYDPIWEWGHNIWLIGDHLSLTCILFCVANLLYSWMTMRQQRDQMVGA 525 Query: 513 DKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 Q ++ W MPV F F + + +GL Y+ S S + + + L+ Sbjct: 526 QAEQMKMMQWMMYLMPVFFFFMFNDYSSGLNFYYFISLFFSAAIMWAL-RKTTNDEKLLA 584 Query: 569 RLRSTFSKNYNS 580 L + + +N ++ Sbjct: 585 TLEARYKENKDN 596 >gi|189466153|ref|ZP_03014938.1| hypothetical protein BACINT_02523 [Bacteroides intestinalis DSM 17393] gi|189434417|gb|EDV03402.1| hypothetical protein BACINT_02523 [Bacteroides intestinalis DSM 17393] Length = 616 Score = 211 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 106/601 (17%), Positives = 222/601 (36%), Gaps = 47/601 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-----RKNIQTVKQPNQVDNSYAA 55 M+ N + L I++ + + + + +Q ++ + A Sbjct: 1 MD--KNTITGLVLIAILLVGFSFLSRPSKEQLEAQQRYYDSIALVQQREEALKAKADAAL 58 Query: 56 VLIDDRAQALSMS----------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 D S S + ++N +++ KG L+ Y Sbjct: 59 ANEKDVETVDSTSLFFNALQGTDSLITIQNDVAELTLSTKGGSIFSAVLKEYME--QDKK 116 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 VTL + ++ + N + + + T ++L +A+ Sbjct: 117 TPVTLFTGNDVSMNFLFY--------NKKETIQTKDYYFTTVNRTDSTVTMRLSADSASY 168 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 I F+ + + + + ++ + + + + + + Sbjct: 169 IDFKYALHPNTYLVDFSIEAKGMTDKLAASNNYVDIEWAQRARQIEKGYVYENRLSELTY 228 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 Y K E W+ +++++SVFI + + + Y Sbjct: 229 KFMGDGTDYLSANKDDEKEVPERLDWIAFKNQFFSSVFIADTDFEKTKLVSKMEREGSGY 288 Query: 286 QAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWGWFY 340 +SA T P T F + G + T+ +K + R L + Sbjct: 289 IKDYSAEMSTSFDPTGKQPTQMFFYFGPNHYKTLTALDKGRSEKWELNRLVYLGWPLIRW 348 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + + GI ++L T+ VK + FP K Y+S+A M+ ++PKIDE+ Sbjct: 349 INKWFTINIFDWLSGWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKPKIDEIN 408 Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +K+ + Q+ M+ +Y + ++P+ GC P+L+Q PV A++ + ++E+R + Sbjct: 409 KKYPKQEDAMKKQQEMMGMYSQYGVSPMGGCLPMLVQFPVLIALFMFVPSAIELRQQS-F 467 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQ 516 W DL+ D +PF H+ ++ ++M+L + K D Q Sbjct: 468 LWADDLSTYD--AFINFPFNIPFLGS---HLSLFCLLMTLVNILNSKFMMQQQDTGANPQ 522 Query: 517 AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + WM P++ +F L+S+P+GL Y+ S +IS+V +I++ E L+ +L + Sbjct: 523 MAAMKWMTYLMPIMMLFILNSYPSGLNYYYFISTLISVV-TTLILRKTTNEEKLLAQLEA 581 Query: 573 T 573 Sbjct: 582 R 582 >gi|29345999|ref|NP_809502.1| putative inner membrane protein translocase component YidC [Bacteroides thetaiotaomicron VPI-5482] gi|253568600|ref|ZP_04846011.1| inner membrane protein oxaA [Bacteroides sp. 1_1_6] gi|298387394|ref|ZP_06996947.1| inner membrane protein OxaA [Bacteroides sp. 1_1_14] gi|38502986|sp|Q8AA76|OXAA_BACTN RecName: Full=Inner membrane protein oxaA gi|29337893|gb|AAO75696.1| conserved hypothetical protein [Bacteroides thetaiotaomicron VPI-5482] gi|251842673|gb|EES70753.1| inner membrane protein oxaA [Bacteroides sp. 1_1_6] gi|298260063|gb|EFI02934.1| inner membrane protein OxaA [Bacteroides sp. 1_1_14] Length = 618 Score = 211 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 102/603 (16%), Positives = 222/603 (36%), Gaps = 51/603 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + L I++ + P E++ ++K ++ Q + A Sbjct: 1 MD--KNTITGLVLIGILLVGFSYL-SRPSEEQIAAQKKYYDSIAVVQQQQEALKAKTEAA 57 Query: 61 RAQALS------------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVS 102 A +V ++N + KG + L+ Y Sbjct: 58 LANENKGAAAAADSSALFFNAMHGTDSKVSIQNSVAEITFTTKGGRVYSAMLKEYK--GQ 115 Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 + V L + ++ N + + + + ++L N Sbjct: 116 DKTNPVVLFDGDDATMSFNFY--------NKQGAIQTKDYYFEAVNKTDSSVTMRLAADN 167 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 A+ I F T+ + + + + + Q Sbjct: 168 ASYIDFIYTLKPNSYLMNFEIKATGMEGKLASTEYVDIDWTQRARQLEKGFTYENRLSEL 227 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 K S + + + W+ +++++SVFI ++ + S + Sbjct: 228 TYKVKGDNVDNLSAAKDDEKDLGNTAIDWVAFKNQFFSSVFIADQDFNKVSVKSRMEQQG 287 Query: 283 ARYQAKFSANE-ITILPGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWG 337 + Y +SA P T + + G F T+ +K + R L Sbjct: 288 SGYIKDYSAEMSTFFDPSGKQPTEMYFYFGPNHFKTLKALDKGRTEKWELNRLVYLGWPL 347 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + + + GI +++ T+ VK++ +P K Y+S+A M+ ++PKID Sbjct: 348 IRWINQFITINVFDWLSGWGLSMGIVLLILTIMVKVVVYPATWKTYMSSAKMRVLKPKID 407 Query: 398 ELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 E+ +K+ + Q+ ++ LY + ++P+ GC P+LLQ P+ A++ + ++E+R Sbjct: 408 EINKKYPKQEDAMKKQQEVMSLYSQYGVSPMGGCLPMLLQFPILMALFMFVPSAIELRQQ 467 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--- 513 + W DL+ D T +PF H+ ++ ++M+++ + K + D Sbjct: 468 S-FLWADDLSTYD--AFITFPFHIPFLGN---HLSLFCLLMTVTNILNTKYTMTMQDTGA 521 Query: 514 ----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 ++ MP++F+F L+ +P+GL Y+ S +IS+ ++++ E L+ Sbjct: 522 QPQMAAMKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTLISVG-TMILLRKTTDETKLLAI 580 Query: 570 LRS 572 L + Sbjct: 581 LEA 583 >gi|163755913|ref|ZP_02163030.1| putative inner membrane protein translocase component YidC [Kordia algicida OT-1] gi|161324084|gb|EDP95416.1| putative inner membrane protein translocase component YidC [Kordia algicida OT-1] Length = 640 Score = 210 bits (534), Expect = 5e-52, Method: Composition-based stats. Identities = 119/623 (19%), Positives = 234/623 (37%), Gaps = 70/623 (11%) Query: 8 FVAIALSVIIVYAW-----------------QNFYVYPRIEEMNNERKNIQTVKQPNQVD 50 F+ +AL +I W + ++ N N D Sbjct: 12 FIGLALIALIAVYWYNSTKPTEEEIAAAEAEKAKMEQVVKQDSITAATNATKETILNLSD 71 Query: 51 NSYAAVLIDD------RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR------GYH 98 ++ A A +S L+N L I+ KG Q + ++ + Sbjct: 72 STQVAQYKSSLGAFGYNADKVSADKVTTLENQLLSLKISNKGGQIVEARVKGQMVKGEFE 131 Query: 99 LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 V+ +S V L+ N L+ +T N + S + +KL Sbjct: 132 PLVTYDSLPVYLVKDGNASFG----LNLTTTDNRVINTKDLAFEPNYSENGDSKVLSMKL 187 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNN-SIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + + I D F + N + ++ + + Sbjct: 188 KVAADKYLEYRYEIKDDYMVDFSVRSQGLNGVINASQPINMEWKLKSFRHAKSVTYENRY 247 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF-- 275 + K S + +++ +WLG ++ S+ + + Sbjct: 248 TDL-----HYEYDDGKDSYLGQATDEEKINDVTWLGYKQHFFTSILLTDDPFKTATISTE 302 Query: 276 ----KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 + + + F A L G + T L+ G ++ + Y+++L Sbjct: 303 NIVDSEMPEKDVEFLKNFGATIPLELKGGELNYTMDLYHGPTDYDILSKYDRNLDEI--- 359 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + + WG F +I + + + + GIAI++ T+ V+LL P+ K Y+S A MK Sbjct: 360 VPLGWGIFGWINRFFLIPLFGLLSSFLPAGIAIIVMTILVRLLLSPITYKSYLSQAKMKV 419 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 I+P+I+E+ EK+K + Q+ ++LY ++P+AGC P L+QIPVF+A++ + Sbjct: 420 IRPEINEINEKYKDDAMKK-QQETMKLYGKAGVSPMAGCIPALMQIPVFYALFMFFPSAF 478 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS--- 508 E+R + W +DL++ D I L +P Y H+ ++PI+ S+++F M+M+ Sbjct: 479 ELRQKS-FLWAEDLSSYD--TIAQLPFNIPVYG---DHISLFPILASIAIFFYMRMTTGQ 532 Query: 509 --PPPADKGQAMI----------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q + + + P++ +F +++ +GL +Y+ SN+I+I VI Sbjct: 533 QMSSMQQPTQEGMPDMSKMMKYMMYFSPLMMLFFFNNYASGLSLYYFVSNLITIGIMLVI 592 Query: 557 MKMHGAEIGLIDRLRSTFSKNYN 579 + ++ K Sbjct: 593 KNYIIDNDKIHAQIEENKKKPKK 615 >gi|326800909|ref|YP_004318728.1| membrane protein oxaA [Sphingobacterium sp. 21] gi|326551673|gb|ADZ80058.1| Membrane protein oxaA [Sphingobacterium sp. 21] Length = 609 Score = 210 bits (534), Expect = 5e-52, Method: Composition-based stats. Identities = 113/606 (18%), Positives = 222/606 (36%), Gaps = 45/606 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N F + L +II+ F++ P EE+ E++ ++ Q + + Sbjct: 1 MD--RNTFTGLFLIMIILAG-SVFFMKPSEEEIKKEQQLQDSIAQAKSPETKKTTDSLFA 57 Query: 61 RAQALSMS-------------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 Q L S + L+N + +I+ KG + + ++G + Sbjct: 58 AQQGLEASTVDSTQMSGPFGGAKVGNEELISLENEFIKATISTKGGRVKSVEVKGEKDYL 117 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 L+ KN + + N T + + + Sbjct: 118 GKP-----LVLFGGDKNRFGLQFSTAGVNINTNDLYFIPQAKEPIVVENTDSASLIMRLS 172 Query: 162 NANNILFERTISLDEHYL---FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 A N + SL + F IV + + PQ + + Sbjct: 173 YAENKYIDYVYSLKGNSHQLGFTIVTKGMQDVVAPTETKLVLNWQADLPQKEKDMKDERN 232 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 A K + W+ Y+++V I + + Sbjct: 233 RSTA--YFKEFDGDVNELSTTKDETKDVGKTDWISFKQHYFSNVLIAKNSFNGGTLKVST 290 Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 + ++ + + T + G +F + DL + + WG Sbjct: 291 VNSDEIVKSFAANMSLDFNRQDVNTYPMSFYFGPNKFSILKDQGHDLEKQ---INMGWGP 347 Query: 339 FYFIAKPMF-MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +I + + + + N+G+ I + TV +K++ PL K YVS A M+ ++P++D Sbjct: 348 MKWINRFITLPVFNLLEGFNWNYGLIIFVLTVLLKIVLSPLTYKSYVSMAKMRVLKPEMD 407 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E++ K + +LQ+ ++LYK +NP+ GC P+LLQ+P A + E+R Sbjct: 408 EIKAKVGEDNQTLLQQEYLKLYKQAGVNPMGGCIPMLLQMPFMIAFFFFFPNLFELRGES 467 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W+KDL+ D F + I+ H+ + I+M+ + + + + Sbjct: 468 -FLWMKDLSTYDSIVNFPMIPIIN-----INHISLMCILMTCATLLSTWYNNMVSGATGQ 521 Query: 518 M--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 M I +MP++F F L+S+PAGL Y+ S ++ V Q I + + + +++ Sbjct: 522 MKYIGYFMPLIFFFVLNSYPAGLNYYYFLSTCLTFVIQFFI-RQSINDEKIHAMIQANKK 580 Query: 576 KNYNSQ 581 K S+ Sbjct: 581 KPEASK 586 >gi|301168599|emb|CBW28189.1| membrane protein OxaA [Bacteriovorax marinus SJ] Length = 488 Score = 210 bits (533), Expect = 6e-52, Method: Composition-based stats. Identities = 111/560 (19%), Positives = 220/560 (39%), Gaps = 80/560 (14%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY--AAVLID 59 + F+A+ LS ++++ WQ ++ + + K + + V+ Sbjct: 3 DDQKRMFLAVVLSGLVLFGWQTYFAPKQKPIIEQNASEQINAKAAAKTQETTVKQEVVKP 62 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 S L N IN DL+++ + +S + + + Sbjct: 63 VTESVSSEVKSFTLTNNGHSVKINS------DLSIQDFSNPGAS----FDFFATTGVEKP 112 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 + E+ + ++ + + I G + + + FK + ++ + Y Sbjct: 113 FKIEIGNEARFSSFNFTFNQVSPSHIQGSNV--KLAMNVDFKMDDLGKVTYKVTSAKAYQ 170 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 F++V T T + + S Q + ++ Sbjct: 171 FRVVFTSTEREEENRQIRQF----------------------------SYYTQSLNHMKV 202 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + WL I + + + + + + Sbjct: 203 GDSDDDDGKMRWLAIDFNFHLFAITFKEPVAARLKAFESGEFRSTLVNDVH--------- 253 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + K + + + ++ ID+G+F I+ P+ + + ++ V N Sbjct: 254 ---NLEGSIVFSKKNYDLLAKLGD-----KLDLSIDFGFFGIISVPILRGLQFVHDYVPN 305 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +GIAI++ T+ ++ + FPL K + S M+ IQP++ +++EKFK PQ +QK ++ + Sbjct: 306 YGIAIIILTILIRTIMFPLQYKSFKSMKKMQKIQPQLTKIKEKFKD-DPQRMQKETMEAF 364 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K NPL GC P++ Q+P+FFA Y+V+ + E +PF+GWI DL+ DP Sbjct: 365 KKAGANPLGGCLPLIAQMPIFFAFYQVLYNAEEFVGSPFFGWIADLSIKDPYY------- 417 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGL 538 + P++M+L+M +Q +++P P AD Q I+ MP+VF F + PAGL Sbjct: 418 ------------VLPVLMALAMALQTRLNPSPSADPTQKKIMMLMPIVFGFFMKDLPAGL 465 Query: 539 IIYWSWSNVISIVQQAVIMK 558 +Y S + + QQ ++ K Sbjct: 466 NLYIFTSTIYGVGQQLLVYK 485 >gi|183219716|ref|YP_001837712.1| inner membrane protein OxaA [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909851|ref|YP_001961406.1| preprotein translocase subunit YidC [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774527|gb|ABZ92828.1| Preprotein translocase, YidC subunit [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778138|gb|ABZ96436.1| Inner membrane protein OxaA; putative membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 649 Score = 210 bits (533), Expect = 7e-52, Method: Composition-based stats. Identities = 113/587 (19%), Positives = 211/587 (35%), Gaps = 59/587 (10%) Query: 29 RIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQ 88 + + N N T P LK S + + G + Sbjct: 43 EVSKTENTDTNKTTTADPKAEIKKATTESTKLNPVKTEDVKTFSLKTDSFLVRFSSLGGR 102 Query: 89 FDDLNLRGYHLDVSSN-----SPIVTLLSPSNTK------NAYFAELDYVSTANNIELPN 137 + ++ + S P + T+ + + + + I Sbjct: 103 ITEYYIKDHKEPDGSEFVIAKDPKFQIDFDGQTEKAVELTRGQGFDFNIIEDKDTIPFSA 162 Query: 138 SNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFS 197 N V S T T + + + +R FK T+ N + + I S Sbjct: 163 YNLVNFSSSYNADTKTVIFEAPSLDGKFTIQKRFQFFPSENYFKFHLTLKNRTGETIHIS 222 Query: 198 PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWL----- 252 P + + ++ ++ + Y D + S + Sbjct: 223 PTKSDVYFRSFSSLGPILKKKEDFNDRDNAHYFRYYYLDGSFKDHVDGTSSQGFFDNLFG 282 Query: 253 ----------------------GISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 G +Y+ V P + + Sbjct: 283 SNEGKDTRYEIKKGSNDKVDFVGTGSRYFIGVIDPLDDKPAGVLLDNRKGNETGVLLVY- 341 Query: 291 ANEITILPGKSITTTNFLFAGAKEFP-------TIHHYEKDLAI-----PRFEMLIDWGW 338 + + PG+ I + G +E + + ++ + + G Sbjct: 342 -DNWKLGPGEEIKLDYAAYVGVRELDGTAFRDSKLDPKINNDSVFAGLSESLDKSFNQGI 400 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + ++ Y ++ N+G AI++ + KL F+PL KKQ S M+ + P+I Sbjct: 401 TTPLRNGIVWILKKIYLVIPNYGWAIVIFAILFKLAFYPLNKKQAESMKKMQELSPQIKL 460 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + EK+ P++ Q+ I+LYK + NP+AGC P+L+QIP+F A+Y S ++++ ++P Sbjct: 461 INEKYAD-DPKLKQEKTIELYKKNGTNPMAGCLPMLIQIPIFIALYTAFSDTVDLWNSP- 518 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + WIKDL+ D T+F G + + I P+IM + +Q KM+ D Q M Sbjct: 519 FLWIKDLSEPD-----TVFTTPKLAFIGTLAINILPLIMVATQVVQSKMTTVSTDPNQKM 573 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 ++ MPV+ ++ S PAG+ +YW+ N++SI QQ K +E Sbjct: 574 MMYMMPVIMLYFFWSMPAGVTMYWTMQNILSIAQQVYTNKFVKSEDK 620 >gi|317476267|ref|ZP_07935517.1| YidC/Oxa1 family membrane protein insertase [Bacteroides eggerthii 1_2_48FAA] gi|316907541|gb|EFV29245.1| YidC/Oxa1 family membrane protein insertase [Bacteroides eggerthii 1_2_48FAA] Length = 615 Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats. Identities = 108/589 (18%), Positives = 223/589 (37%), Gaps = 48/589 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--KNIQTVKQPNQVDNSYAAVLI 58 M+ N + L I++ + + + +R +I V+Q + A + Sbjct: 1 MD--KNTITGLVLIAILLVGFSFLSRPNKEQLAAQQRYYDSIAQVQQREADLKAKAEAAL 58 Query: 59 DDRAQALSMSPR-------------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + +A + V ++N ++ KG + L+ Y Sbjct: 59 ANNKEAQTTDSTALFFDALQGTDSQVTIQNNLAELTVATKGGRISSATLKEY--MGQDKK 116 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 VTL S + + N + + T ++L +A+ Sbjct: 117 TPVTLFSGDDASMNFLFY--------NKKETIQTEDYYFKVVDYTDSTATMRLSADSASY 168 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 I F+ ++ ++ YL + + + + + + Sbjct: 169 IDFKYSMH-NDTYLVDFTIDAVGMANKLASTKYVDIEWSQRARQIEKGYTYENRLSELTY 227 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + Y K+ E W+ +++++SVF+ + + + Y Sbjct: 228 KITGDGTDYLSAGKNDEKEVAERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQGSGY 287 Query: 286 QAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWGWFY 340 +SA T P TT F + G + T+ +K + R L + Sbjct: 288 IKDYSAEMSTVFDPTGEKTTQLFFYFGPNHYKTLTALDKGRTEKWELNRLVYLGWPLIRW 347 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + + + GI ++L T+ VK + FP K Y+S+A M+ ++PKIDE+ Sbjct: 348 INKWFTINIFDWLSSWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKPKIDEIG 407 Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +K+ + Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R + Sbjct: 408 KKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS-F 466 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQ 516 W DL+ D +PF H+ ++ ++M+++ + K D Q Sbjct: 467 LWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKFMMQQQDTGANPQ 521 Query: 517 AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + WM PV+F+F L+ +P+GL Y+ S +IS+V +IM+ Sbjct: 522 MAAMKWMSYLMPVMFLFILNDYPSGLNYYYFISTLISVV-TTLIMRKTT 569 >gi|218130954|ref|ZP_03459758.1| hypothetical protein BACEGG_02556 [Bacteroides eggerthii DSM 20697] gi|217986826|gb|EEC53158.1| hypothetical protein BACEGG_02556 [Bacteroides eggerthii DSM 20697] Length = 615 Score = 209 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 108/589 (18%), Positives = 223/589 (37%), Gaps = 48/589 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER--KNIQTVKQPNQVDNSYAAVLI 58 M+ N + L I++ + + + +R +I V+Q + A + Sbjct: 1 MD--KNTITGLVLIAILLVGFSFLSRPNKEQLAAQQRYYDSIAQVQQREADLKAKAEAAL 58 Query: 59 DDRAQALSMSPR-------------VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + +A + V ++N ++ KG + L+ Y Sbjct: 59 ANNKEAQTTDSTALFFDALQGTDSQVTIQNNLAELTVATKGGRISSATLKEY--MGQDKK 116 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 VTL S + + N + + T ++L +A+ Sbjct: 117 TPVTLFSGDDASMNFLFY--------NKKETIQTEDYYFKVVDYTDSTVTMRLSADSASY 168 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 I F+ ++ ++ YL + + + + + + Sbjct: 169 IDFKYSMH-NDTYLVDFTIDAVGMANKLASTKYVDIEWSQRARQIEKGYTYENRLSELTY 227 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + Y K+ E W+ +++++SVF+ + + + Y Sbjct: 228 KITGDGTDYLSAGKNDEKEVAERLDWIAFKNQFFSSVFLADADFEKTKLSSKMETQGSGY 287 Query: 286 QAKFSANEIT-ILPGKSITTTNFLFAGAKEFPTIHHYEKD----LAIPRFEMLIDWGWFY 340 +SA T P TT F + G + T+ +K + R L + Sbjct: 288 IKDYSAEMSTVFDPTGEKTTQLFFYFGPNHYKTLTALDKGRTEKWELNRLVYLGWPLIRW 347 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + + + GI ++L T+ VK + FP K Y+S+A M+ ++PKIDE+ Sbjct: 348 INKWFTINIFDWLSSWGLSMGIVLLLMTLIVKAVVFPATWKTYISSAKMRVLKPKIDEIG 407 Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +K+ + Q+ ++ LY + ++P+ GC P+L+Q P+ A++ + ++E+R + Sbjct: 408 KKYPKQEDAMKKQQEVMGLYSQYGVSPMGGCLPMLIQFPILMALFMFVPSAIELRQQS-F 466 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQ 516 W DL+ D +PF H+ ++ ++M+++ + K D Q Sbjct: 467 LWADDLSTYD--AFINFPFHIPFLGS---HLSLFCLLMTVTNILNTKFMMQQQDTGANPQ 521 Query: 517 AMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + WM PV+F+F L+ +P+GL Y+ S +IS+V +IM+ Sbjct: 522 MAAMKWMSYLMPVMFLFILNDYPSGLNYYYFISTLISVV-TTLIMRKTT 569 >gi|289548954|ref|YP_003473942.1| membrane protein insertase, YidC/Oxa1 family [Thermocrinis albus DSM 14484] gi|289182571|gb|ADC89815.1| membrane protein insertase, YidC/Oxa1 family [Thermocrinis albus DSM 14484] Length = 498 Score = 209 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 125/573 (21%), Positives = 228/573 (39%), Gaps = 84/573 (14%) Query: 1 ME----RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ F+ + + ++A+Q + + R E+ Q D S + Sbjct: 1 MDKKDIDTKRLFIFLLVITFALFAYQTYLLLFRPSTPPQEKPKQ------VQKDESVPQL 54 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 ++ +A S + + I+ +G + Y D+ + S Sbjct: 55 MLGSFREAQKPSETLSYRLGDFSIKISPQGGKVVSWVDEKYGKDL--------VTSTEKK 106 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 Y E+ ++EL S +I N + + D Sbjct: 107 LGVYPLEIFTGDPQKDVELNFSPYQVQGSDREISMTLQ--------GNGWFVRKRLVYDG 158 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 I + + I + ++F G + S+ D Sbjct: 159 ER---IKLYIEEQGLGPIW-------VNVGTPLEEDSFYTHVGPVLEQD-GSVKRIDIKD 207 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + + + G+ +Y+ + L H+ ++S I Sbjct: 208 V--EGRQSIKGDIKFAGVESRYYFKGLV---GNIPQVVIYRLEGDHSLVVVRYSQPLI-- 260 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 L+ GAK++ + + ++D+G I KP+F+ M + Y Sbjct: 261 -----------LYMGAKDYGRLR-------VLGLSEVLDYGTLRIIVKPLFVFMYWIYEH 302 Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + ++ +I++ T+ V+L+ FPL K VS + + PK+ ELREK+K P + Q+ ++ Sbjct: 303 LHSWVFSILVLTLLVRLIVFPLTYKSTVSMMRLSELAPKMQELREKYKDDPVK-FQEELM 361 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY NP++GC PILLQIP+FFA+YKV++I+ E++ A + WI LA DP Sbjct: 362 KLYAEAGFNPMSGCLPILLQIPIFFALYKVLTITAELQLAS-FLWIPSLAQKDPYY---- 416 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 + PI+M ++M Q +SP P DK Q +++ VVF F +SFP+ Sbjct: 417 ---------------LLPILMGVTMIAQQWVSPAP-DKSQNLMMYVTSVVFTFLFASFPS 460 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 GL++YW+++N+++IVQ VI + E + Sbjct: 461 GLVLYWTFNNILNIVQSYVIKRFLLKEEPKRGK 493 >gi|108761211|ref|YP_635612.1| inner membrane protein, 60 kDa [Myxococcus xanthus DK 1622] gi|108465091|gb|ABF90276.1| inner membrane protein, 60 kDa [Myxococcus xanthus DK 1622] Length = 603 Score = 209 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 111/558 (19%), Positives = 193/558 (34%), Gaps = 53/558 (9%) Query: 30 IEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89 + P + +VEL+ + + +GA Sbjct: 46 PDAGVVATAPADAGTPPAVQPPEGGTGTGATAEAPPPPARKVELQRDEATYAFSSEGAGL 105 Query: 90 DDLNLRGYH----LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-------NIELPNS 138 L+G +++ L P Sbjct: 106 TAAVLKGAKMREQQELTVTQGFQKLFGKEIPPAPQMDLARPTPGQPLPLAVSITGASPLP 165 Query: 139 NTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSP 198 + + + + + + + + V N S Sbjct: 166 ADLNYTLDEGAPGNADGVTFTGRRGPWEVVKTVKWPMDGFELSYTLQVRNTSGQPQSGEL 225 Query: 199 RGRIMRHKPQTATNTFGVQE-----GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 + R + A L + D + + G Sbjct: 226 QVHHNRAIDPNFEHAPSFFGGVGNLSRSACWVGDKLQKMSPGDDHPDAED-TRGQIQFFG 284 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 I +Y+ S P + S + + A F IT PG+++T + G K Sbjct: 285 IDQQYFLSALYPLEGPRAGSCSFEATPTLRKVTASF---PITAAPGETVTLRFGGYFGPK 341 Query: 314 EFPTIHH-----------YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 + + P +D+G + I K + +M +FY + GN+G+ Sbjct: 342 DTDLLAQVPGASLRAATGQTDATFHPPLAETVDFGIWAVICKVLLWVMKFFYGVTGNWGV 401 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L TV VKL+ PL + VS +K +QP+++E+R+K + Q +++LY+ Sbjct: 402 AIILLTVVVKLVLLPLTYRSMVSMEEVKKLQPRMEEIRKKHADNREQQNL-EIMKLYQEA 460 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK-DLAAADPTNIFTLFGILP 481 +NPL GC P+L+Q+PV+ A++ + S ++ PF G I DL DPT Sbjct: 461 KVNPLGGCLPLLIQMPVWIALFTALRNSFDIYGEPFIGPIWRDLTYKDPTY--------- 511 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLII 540 + P+ + +SM I KM P D QA I+ W P++F L +PAGL + Sbjct: 512 ----------LLPLALGVSMVITQKMQPQMMDATQAKIMTWFLPIIFTLTLLQYPAGLSL 561 Query: 541 YWSWSNVISIVQQAVIMK 558 Y +N++SI QQ + K Sbjct: 562 YIFTNNILSIAQQYGLRK 579 >gi|258649215|ref|ZP_05736684.1| inner membrane protein OxaA [Prevotella tannerae ATCC 51259] gi|260850480|gb|EEX70349.1| inner membrane protein OxaA [Prevotella tannerae ATCC 51259] Length = 626 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 102/607 (16%), Positives = 215/607 (35%), Gaps = 43/607 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPR----IEEMNNERKNIQTVKQPNQVDNSYAAV 56 M+ N + L +++ + + + E + + Sbjct: 1 MD--KNTLTGLFLIALLLIGFSYYTTTQTEETQVAEQTAQPAAKPATDSTKVSTTANKQQ 58 Query: 57 LIDDRAQALSMSPR-----VELKNPSLIGSINLKGAQFDDLNL---RGYHLDVSSNSPIV 108 I D + S + LKN + +I+ KG ++ L + Y ++ + Sbjct: 59 HIADSTDIFNGSREGENTPISLKNEHVAVTISPKGGAISNVRLCEFKSYSDFQNNKEAQL 118 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 +L+ K + E T L ++ Sbjct: 119 SLIEEKTHKLNFRFETI------------EGLYSTEDYYFQPLAKTDSTLTMALGSSKGD 166 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 I V+T G ++K + F + + + K Sbjct: 167 TLYIDYKLIKGSYFVNTTIRIKGRSFAGKTLGIDWKNKIRQQEKGFYFENLYSTLTYKKE 226 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL--SDGHARYQ 286 +KS + W+ D+Y+++V I K + ++ K S+G + Sbjct: 227 NEGTDKLSEQKSDELKPEGNIDWIAFKDQYFSAVLIAGKNSFTNTFLKSDTCSEGSGYVK 286 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHH------YEKDLAIPRFEMLIDWGWFY 340 + E+ P T + G ++ + KDL + L + + Sbjct: 287 DYIATAEVAFDPTGKNVTQVQFYFGPNKYLYLKGLEKYKLGNKDLDLQDLVYLGWPLFRW 346 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + N GI ++L T+ ++ + +P KK ++STA M+ ++PK+DEL Sbjct: 347 INRFFTIYVFDFLSGFGLNMGIVLLLITLLMRAIVYPATKKSFLSTAKMRVLRPKVDELA 406 Query: 401 EKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 +K+ Q+ +QLY + ++P+ GC P+ +Q+P++ A++ + + E+R + Sbjct: 407 KKYPNKEDAMKRQQETMQLYSQYGVSPMGGCLPMFIQMPIWIAMFNFVPNAFELRQQ-AF 465 Query: 460 GWIKDLAAADPTNIFT--LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 W DL+ D + ++GI + ++ S Q + S Q Sbjct: 466 LWADDLSTYDDIISWNTPIWGIGTHLSLFCVLFCCTNLLYSWLTMKQQQDSMSGEQAQQM 525 Query: 518 MILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 I+ W MP+ F F + + +GL Y+ S + S + + + + L+++L + Sbjct: 526 KIMQWMTFLMPIFFFFMFNKYSSGLNYYYFVSLLTSALTMWYLRRSTDDK-KLLEKLEAN 584 Query: 574 FSKNYNS 580 F N ++ Sbjct: 585 FRANKDN 591 >gi|325282064|ref|YP_004254606.1| Membrane protein oxaA [Odoribacter splanchnicus DSM 20712] gi|324313873|gb|ADY34426.1| Membrane protein oxaA [Odoribacter splanchnicus DSM 20712] Length = 616 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 105/606 (17%), Positives = 237/606 (39%), Gaps = 39/606 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQP-------------- 46 M+ N + + +I+ + + + +RK + Sbjct: 1 MD--KNTIAGLVIIFLILIGFSYLTRPSKEQVAEMQRKQDSIARVDRLRAQELAAQQQAQ 58 Query: 47 NQVDNSYAAVLIDDRAQAL-----SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 DN+ AA + ++ ++ + + + L+N + I+ G + ++L+ Y Sbjct: 59 KTPDNTTAANPLATKSDSIFVQNDTENKIITLENDKIKLHISTLGGRIVYVDLKEYRT-- 116 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 +S + L T +T + + ++L Sbjct: 117 -HDSLPLVLWKNGETAFGMNFYARNQEINTEKFFFTPSTTETTLYAQGNEQVLSMRLYAD 175 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 ++ + + ++ D + + T + S + + + Sbjct: 176 SSRYLEYLYKLAPDSYMTDFSIITHNMGDVIASNSSFLTLFWGINMPQLEKSKDFENRYT 235 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 V S + + W+ ++++S+ I + S +S Sbjct: 236 GVYYKFSEDAVENMSLTSDEEETLPNKVQWIDFKQQFFSSILISEQPLSDVELKSNISKK 295 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + ++ + + F G + + Y L +P + +F Sbjct: 296 DGYLKDAYAEIPLAYNGSANEQYNMQFFFGPNSYKVLKEYGDHLDLPDVINMGWKWIAWF 355 Query: 342 IAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + ++ N N+GI I+L T+ +K++ FPL K Y+S A M+ ++P++DE+ Sbjct: 356 NKYFVIPIFNFLENHTALNYGIIILLLTLIIKIILFPLTYKSYMSQARMRVLKPQVDEIA 415 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 +K+ Q+A ++LYK +NP+ GC P+L+Q+P+ A++ ++E+R + Sbjct: 416 KKYPADKAMERQQATMKLYKQAGVNPMGGCLPMLIQMPILIALFYFFPGAIELRQQS-FL 474 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKG-- 515 W DLA+ D +I TL +PFY HV ++ ++M+ + I M M + P D+ Sbjct: 475 WATDLASYD--SIATLPFTIPFYGN---HVSLFCLLMTATNIIYMIMNNKNQPQNDQMKG 529 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 ++ MP++F+F +S+ +GL Y+ + +I+I+Q +I + + L+ ++ + Sbjct: 530 MQTMMYIMPIMFLFIFNSYSSGLSYYYFIATLITILQTWII-RKFVDDQKLLKQI--ELA 586 Query: 576 KNYNSQ 581 K+ + Sbjct: 587 KSKPVK 592 >gi|300772349|ref|ZP_07082219.1| membrane protein OxaA [Sphingobacterium spiritivorum ATCC 33861] gi|300760652|gb|EFK57478.1| membrane protein OxaA [Sphingobacterium spiritivorum ATCC 33861] Length = 607 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 105/603 (17%), Positives = 228/603 (37%), Gaps = 42/603 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + + L I+ + + P E+ E++ ++K+ + A + Sbjct: 1 MD--RNTLIGLILIFAILGG-SFYLMKPSESEIKQEQRLQDSLKRVKEGLPPVADTTKNP 57 Query: 61 RAQALSMSP-------------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 A++ + + L+N +I I KG + + L+ Sbjct: 58 AKTAVNTNQVDSAELKKPFGAAKYGEEKIITLQNEKIIAKITSKGGRVKSVELKN--EKN 115 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 SP++ +N F + NN+ ++ ++ G T +L + Sbjct: 116 FDGSPLILFDGNNNRFGLMFNAAGQNISTNNLNFQTTDADVSVSKGDSKTV--KFRLSYN 173 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 +A I + T+ D++ L V+ V ++ + Sbjct: 174 DAQYIEYTYTLKGDDYNLGLDVNAVGLQNLIPQDQKTILLDWGAVLYQKEKNIKGERDKS 233 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 ++ + + + +W+ Y++S+ + + Sbjct: 234 SIYYKTAENNVDHLKESGDDDDQLDKRLTWIAFKQHYFSSILTSKTGFASADLDVKTAAE 293 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + + ++ K + F G ++ + + + WG + Sbjct: 294 ADIVKLYSAKAKLDFSNQKDNQYSFNFFFGPNKYNILKAQNDGSNSI---INMGWGPMRW 350 Query: 342 IAKPMF-MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 I + + + ++ ++GI I++ T+ +K + FPL K Y S A M+ ++P++DE++ Sbjct: 351 INQWITVPVFNFLDGFHMSYGIVILILTILLKGVLFPLTYKSYQSMAKMRVLKPQLDEIK 410 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 K + +LQ+ ++LYK +NPL GC P++LQ+P A + E+R + Sbjct: 411 AKVGEDNAVLLQQEQMKLYKQAGVNPLGGCLPLVLQMPFTIAFFYFFPNLFELRGES-FL 469 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-- 518 W+KDL+ D F + HV + ++M+L+ + + + M Sbjct: 470 WVKDLSTYDSPITFPAIFGI-------DHVSLMCVLMTLTTLLTTWYNNATSGATGQMKY 522 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I +MP++F F L+SFPAGL Y+ V + + Q +I + + ++ ++ K Sbjct: 523 IGYFMPLIFFFVLNSFPAGLNYYYFLGAVFTFLTQLLI-RSFVDDDKILAKIEEN-KKRP 580 Query: 579 NSQ 581 S+ Sbjct: 581 ESE 583 >gi|149277802|ref|ZP_01883942.1| putative inner membrane protein translocase component YidC [Pedobacter sp. BAL39] gi|149231490|gb|EDM36869.1| putative inner membrane protein translocase component YidC [Pedobacter sp. BAL39] Length = 598 Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats. Identities = 101/595 (16%), Positives = 215/595 (36%), Gaps = 40/595 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMN------------NERKNIQTVKQPNQ 48 M+ N F + L +I++ F+ + E + P Sbjct: 1 MD--RNTFTGLFLIMIVLAGSFYFFSPSQTEINKEKERIAADSLKKTTKAVTPAATAPTV 58 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 AA+ + L+N L ++ KG + + ++ V Sbjct: 59 PAVDSAALKGPFGGNITGTAQTTVLENEQLKLTLTNKGGRILSVVVKDQKT---YEGKPV 115 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 L K + N N ++ + + Sbjct: 116 VLFDGDQNKFGLNLNIGGKLVNTNDLYFTPTNNGNSVTMRATYLGNQYVEYVYDLQAKSN 175 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 ++ + + +++ N + + + + + + A + L Sbjct: 176 NVGFKINLNGMNQVIQNNAINLNWETVLLEQEKSGKKEKEHAAPYYKYVNESPDHLSIAK 235 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 ++ + + W +++++V +P + +S + + Sbjct: 236 DEKEDLKEGKIE----------WFSFKQQFFSAVLLPKEAFEKGDLEVKVSTQPGQIKWY 285 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + E+ S + + G +F ++ + I + + W Y + Sbjct: 286 AANMELKFNQLASQSYAMDFYFGTNKFSSLKDQGHE--IEKLVDMGYWPLKYINRFVVLP 343 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 + + N+G+ I++ T+ +K+ PL K Y S A M+ ++P++DE++ K + P Sbjct: 344 VFKFLEGFGWNYGLIILVLTIMLKVAMSPLTYKSYTSMAKMRILKPEMDEIKAKVGEDNP 403 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +LQ+ ++LYK +NPL GC P+LLQ+P A + E+R + W+KDL+ Sbjct: 404 TLLQQEYLKLYKQVGVNPLGGCLPMLLQLPFVMAFFFFFPNLFELRGES-FLWMKDLSTY 462 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWMPVV 526 D F LPF H+ + ++M++S I + + M I MP+V Sbjct: 463 DDFIKFG--FTLPFIG---DHLSLMCVLMTISTLIYTYFNNQISGATGQMKYIGYIMPIV 517 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 F+ L+S+P+GL Y+ +N+++ QQ +I K + + L+ K ++ Sbjct: 518 FLGVLNSYPSGLNYYYFLANMLTFAQQFLI-KSMVDDEKIHRTLQEN--KTKPAE 569 >gi|251772740|gb|EES53302.1| putative inner-membrane protein [Leptospirillum ferrodiazotrophum] Length = 399 Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats. Identities = 116/419 (27%), Positives = 187/419 (44%), Gaps = 35/419 (8%) Query: 141 VWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRG 200 W L+ T+P L + N + + +V N D + Sbjct: 8 QWGPPFLPYLSVTSPSTLSLIYSFNNHPVTLSYTLPPQGYHVTVSVDN--PDHLHLVFLP 65 Query: 201 RIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWA 260 + +G I D + E K + S S +W+G KY+ Sbjct: 66 GLNFGMSDETQFIGTEFQGPIYGTPDGKMNEFK----KDISEVFPPTSLTWVGNETKYFI 121 Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 +I K ++ + +A+ L G+ + A T+ Sbjct: 122 -GYISLKGFPASTEIIKDKTNSFIRLSFNNAHASLTLTGEPKRYSLLKSAEPGLLDTV-- 178 Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 D F + F+AK +F+ +S Y + N+G AI+ T+ +K+LF PLA Sbjct: 179 ---DFGWFLFGRI---TLVSFLAKFLFVFLSTLYTHMQNYGFAIIFVTLLIKILFSPLAY 232 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 + S M+ +QP+I +L+ K+K Q L AM++LYK INPL GC P+++QIPVF Sbjct: 233 MSFRSMNQMQQLQPEIKKLQAKYKDDKAQ-LNAAMMELYKERRINPLGGCLPVIVQIPVF 291 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y +++ ++E+R APF WI DL+ DP IF PIIM ++ Sbjct: 292 VALYNILNNTVELRQAPFLLWIHDLSIKDPYYIF-------------------PIIMGIT 332 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 M IQ K++P D Q I+ ++PVV F +FP+GL++YW +N+++I QQ V+M+ Sbjct: 333 MVIQTKLTPSTPDPMQRRIMLFLPVVMTFFFLNFPSGLVLYWIVNNLLTIGQQYVLMRY 391 >gi|149372149|ref|ZP_01891419.1| putative inner membrane protein translocase component YidC [unidentified eubacterium SCB49] gi|149354916|gb|EDM43478.1| putative inner membrane protein translocase component YidC [unidentified eubacterium SCB49] Length = 628 Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats. Identities = 112/628 (17%), Positives = 233/628 (37%), Gaps = 73/628 (11%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEE----------------------MNN 35 ME N + L I+ W + P EE N Sbjct: 1 MEDKKFDLNSLIGFLLIGGILI-WMLYLNKPSEEEILAEEARIEAEAKAAKIEAENKANQ 59 Query: 36 ERKNIQTVKQPNQVDNSYAAVLID---------DRAQALSMSPRVELKNPSLIGSINLKG 86 Q + N AA++ + + S ++N L ++ KG Sbjct: 60 TTTLTQATEDMAVKPNDSAAMMQLKNKLGSFAYSGSLPSATSNTTVIENDVLYLEVSNKG 119 Query: 87 AQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI- 145 + L+ + +S V L+ N+ + T+ N L + + Sbjct: 120 GYVTEARLKEFKT---YDSIPVYLIKDGNS------SFNLKFTSENRTLNTKDLYFEPTL 170 Query: 146 SGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS--IDQIRFSPRGRIM 203 + ++L I + I E+ + + + ++ Sbjct: 171 TQNGANQVLTMRLKTAEDKFIEYRYEILPGEYMTNFSIRSQGLDGMLDTSQPLEIDWQLK 230 Query: 204 RHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVF 263 ++ + + + + SW+ +++S+ Sbjct: 231 GYRHAKSISYENRYTRLTYEYEGSKHSKLD----PTGEDVETEKEVSWMNFRQHFFSSML 286 Query: 264 IPSKETS----FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 + + Y + A + G +++ ++ G ++ Sbjct: 287 LTGDPFKEVKLSSIDLVEDEEVDTVYTKHYGAKMLLTPKGGALSYNMNMYYGPTDYKIFK 346 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 Y+++L M + WG F I K + + F + + GIAI++ T+ +KLL + Sbjct: 347 KYDRNLDEA---MPLGWGIFGVINKYFIIPLYGFLSTYLSAGIAIIVMTILIKLLLSFVQ 403 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 KQY++ A MK ++P+ID ++EKF + + +Q+ ++L +PL GC P +LQIPV Sbjct: 404 YKQYLAQAKMKVLKPEIDAIKEKFGDNKMK-IQQETMKLQNIAGASPLKGCLPAILQIPV 462 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F+A++ ++++R + W DL++ D ++ L +PFY HV ++PI+ S+ Sbjct: 463 FYALFTFFPTAIDLRQKS-FLWADDLSSFD--SVINLPFTIPFYG---DHVSLFPILASI 516 Query: 500 SMFIQMKMSPPPADKGQAM--------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++FI M M+ + + Q ++ P+ + +++ +GL +Y+ SN+I+I Sbjct: 517 AIFIYMTMTMGQSMQAQQQPGMPNMKFLMYLSPLFMLVFFNNYASGLSLYYFISNLITIG 576 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 VI E + +++ +K Sbjct: 577 IMLVIKNWIIDEDKIHAQIQVNKAKPKK 604 >gi|332143491|ref|YP_004429229.1| inner membrane protein, 60 kDa [Alteromonas macleodii str. 'Deep ecotype'] gi|327553513|gb|AEB00232.1| inner membrane protein, 60 kDa [Alteromonas macleodii str. 'Deep ecotype'] Length = 441 Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats. Identities = 101/448 (22%), Positives = 194/448 (43%), Gaps = 23/448 (5%) Query: 1 MERNWN-YFVAIAL-SVIIVYAWQNFYVYPRIEEMNNERKNIQT------VKQPNQVDNS 52 ME + + +AL S ++ WQ Y +E + + + V +S Sbjct: 1 MESQRSFLIIGLALVSFLLWQQWQKDYGPQPVEPVEQQAQQTTQGVPSFNDTGNEDVPSS 60 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 + A S + +E+K +L I+L G +L + ++ S+ P L S Sbjct: 61 DSVPAAQPAVTAQSTNRIIEVKTDTLDLRIDLLGGDVISADLLKFPVEQGSDIPYSLLRS 120 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLIS--GKILTPTTPIKLVFKNANNILFER 170 + Y A+ + N V+ S ++ T I L +KN + + Sbjct: 121 GNG---LYVAQSGLIGAQGPDASANGRPVYTAQSEFYEMTGDTLVIPLTWKNNQGLSITK 177 Query: 171 TISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 T + HY + + N + P ++ + + A + Sbjct: 178 TFTFTKNHYDVNVSYDINNGTGSAATVQPYAQLKQVMEFEDDGNMFMPTYRGAAYSTEDD 237 Query: 230 VEQKY-SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 QKY D + W+G+ + Y+ S ++PS+E + + L + +A Sbjct: 238 RYQKYSFDEIEDDNLRETTKAGWVGMLEHYFVSAWVPSQEQTNTVYSRNLKNQYAV--IG 295 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + T+ G + T + L+ G K+ + + ++ +D+G ++I++P+F Sbjct: 296 VLSPSETVASGDTKTIASTLYMGPKDQDKLAKIAR-----GLDLTVDYGILFWISQPLFA 350 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+++ ++LV N+G+AI+L T+ VK + L KKQY S A M+N+ PK+ +L+++F Sbjct: 351 LLTFLHSLVNNWGVAIILITIVVKGAMYWLTKKQYESMARMRNLAPKMQQLKDRFGD-DR 409 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQ 436 Q + +AM++LY+ +NP+ GC P+LLQ Sbjct: 410 QKMSQAMMELYRKEKVNPMGGCLPLLLQ 437 >gi|281423172|ref|ZP_06254085.1| inner membrane protein OxaA [Prevotella oris F0302] gi|281402508|gb|EFB33339.1| inner membrane protein OxaA [Prevotella oris F0302] Length = 644 Score = 206 bits (524), Expect = 8e-51, Method: Composition-based stats. Identities = 111/620 (17%), Positives = 240/620 (38%), Gaps = 55/620 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE--RKNIQTVKQPNQVDNSYAAVLI 58 M+ N + L +++ + +Y P EE + +I+ V + + + A Sbjct: 1 MD--KNNIIGFLLIAVVLIGFS-WYNRPSAEEQRAAFVKDSIEHVNKSQSLKATQQAEKR 57 Query: 59 DDRAQALS---------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYH----- 98 +A+ + ++ LKN + ++N KGA + ++GY Sbjct: 58 KQQAERQKVLDDTTSLFHKTLTGNAEQIVLKNKKVELTLNTKGATVEKAVIKGYVGHNLK 117 Query: 99 -LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 D S++ V L + ++ +Y A+ ++T++ +P+ T + Sbjct: 118 VKDGSADQNDVILFNGADQSLSYMLSAKETNINTSDLYFVPSQVTDSTVTFTANAGEGKT 177 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + L + + + +S T T + + + + R + + AT T+ Sbjct: 178 LTLKYVLGKDYMLHMQLSAQGMSGLFSPGTQTMDVNWKDKVRQQERGFTFENRYATLTY- 236 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 + E + W+ ++++++V I + ++ Sbjct: 237 -HKSEGGTDYLNEGKEITD--------EAIEDKIDWIAFKNQFFSAVMIAKNDFKSNALM 287 Query: 276 KYLSDGHARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHY------EKDLAI 327 + K ++ P + + G +F + KDL + Sbjct: 288 TSIPQEKGSGYLKQYEAKMKTFFDPTGRQASEFDFYYGPNDFRLLQKMERECHFAKDLQM 347 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 R L + + + + N GI ++L T+ +KLL +P+ KK Y+S+A Sbjct: 348 QRLVYLGWPLFRIINRWFTLYVFDFLTGMNINMGIVLILITLLLKLLTYPMVKKSYMSSA 407 Query: 388 NMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++PK+DE ++F + Q+ Q+AM+ Y + ++PL+GC P+L+Q P++ A++ Sbjct: 408 KMRVLKPKLDEATKQFNKPEDQMQKQQAMMSEYAKYGVSPLSGCLPMLIQAPIWIAMFNF 467 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQ 504 + ++++R + WIKDL+ DP + L + + ++ ++ Q Sbjct: 468 VPNAIQLRGES-FLWIKDLSTFDPIWEWNHNIWLIGDHLSLTCILFCVANVLYTVMTMRQ 526 Query: 505 MKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 K Q ++ WM PV+F F + + AGL Y+ S S + + Sbjct: 527 QKDQMVGQQADQMKMMQWMMFLMPVMFFFMFNDYSAGLNFYYFVSLFFSAAIMWAL-RKT 585 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 + L+ L + +N + Sbjct: 586 TNDEKLLAILEQRYQENKAN 605 >gi|317503117|ref|ZP_07961189.1| inner membrane protein OxaA [Prevotella salivae DSM 15606] gi|315665767|gb|EFV05362.1| inner membrane protein OxaA [Prevotella salivae DSM 15606] Length = 644 Score = 206 bits (524), Expect = 8e-51, Method: Composition-based stats. Identities = 108/620 (17%), Positives = 235/620 (37%), Gaps = 55/620 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + L ++ + +Y P EE + A + + Sbjct: 1 MD--KNNIIGFLLIAAVLIGFS-WYNQPSAEEQRAAFVKDSIEQVNKSQSEKAAQMEKNK 57 Query: 61 RAQALSM-----------------SPRVELKNPSLIGSINLKGAQFDDLNLRGYH----- 98 R QA R+ LKN + + + KGA + ++GY Sbjct: 58 RQQAEKQKVLSDTTSLFHKALTGNVERIVLKNKKVELTFSSKGAYVEQAVIKGYVGHNIK 117 Query: 99 -LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 + S++ +TL S ++ +Y A+ ++TA +P+ + + Sbjct: 118 VKNGSADKKNLTLFSGADQSISYLLNAKETNINTAELYFVPSEVSDSTVTFIADAGEGKS 177 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + L ++ + + +S+ T T + + + + R + + AT T+ Sbjct: 178 LTLKYELGRDYMLHMQMSVQGMAGLFAPGTQTMDVNWKDKARQQERGFSFENRYATLTY- 236 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 + E+ E W+ ++++++V I ++ Sbjct: 237 -HKKDGGTDYLNETKEEIDKS--------IEEQIDWVAFKNQFFSAVMIAKNNFQSNALM 287 Query: 276 KYLSDGHARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + K ++ P + + G +F + EK+ + + Sbjct: 288 TSIPQEKGSGYLKQYEAKMKTFFDPTGKKASEFEFYYGPNDFRLLQKMEKESQFHKDLQM 347 Query: 334 IDWGWFYFIA------KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + + + + ++ N GI ++L T+ +KLL +P+ KK Y+S+A Sbjct: 348 QRLVYLGWPLFRIINRWFTLYVFDFLTSMNINMGIVLILITLLLKLLTYPMVKKSYMSSA 407 Query: 388 NMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++PK+DE ++F + Q+ Q+AM+ Y + ++PL+GC P+L+Q P++ A++ Sbjct: 408 KMRVLKPKLDEATKQFDKPEDQMQKQQAMMAEYAKYGVSPLSGCLPMLIQAPIWIAMFNF 467 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQ 504 + ++++R + WIKDL+ DP + L + + ++ ++ Q Sbjct: 468 VPNAIQLRGES-FLWIKDLSTYDPIWEWNHNLWLIGDHLSLTCILFCVANVLYTMMTMRQ 526 Query: 505 MKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 K Q ++ WM P++F F + + AGL Y+ S S + + Sbjct: 527 QKDQMVGQQADQMKMMQWMMFLMPIMFFFMFNDYSAGLNFYYFVSLFFSAAIMWAL-RKT 585 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 + L+ L + +N + Sbjct: 586 TNDEKLLAILEKRYQENKAN 605 >gi|299140577|ref|ZP_07033715.1| inner membrane protein OxaA [Prevotella oris C735] gi|298577543|gb|EFI49411.1| inner membrane protein OxaA [Prevotella oris C735] Length = 644 Score = 206 bits (523), Expect = 8e-51, Method: Composition-based stats. Identities = 111/620 (17%), Positives = 237/620 (38%), Gaps = 55/620 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEM------------NNERKNIQTVKQPNQ 48 M+ N + L +++ + +Y P EE N + T + Sbjct: 1 MD--KNNIIGFLLIAVVLIGFS-WYNQPSAEEQRAAFVKDSIKHVNKSQSLKATQLAEKR 57 Query: 49 VDNSYAAVLIDDRA-----QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH----- 98 + ++DD + ++ LKN + ++N KGA + ++GY Sbjct: 58 KQQAERQKILDDTTSLFHKTLTGNAEQIVLKNKKVELTLNTKGATVEKAVIKGYVGHNLK 117 Query: 99 -LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 D S++ V L + ++ +Y A+ ++T++ +P+ T + Sbjct: 118 VKDGSADQKDVILFNGADQSLSYMLSAKETNINTSDLYFVPSQVTDSTVTFTANAGEGKT 177 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + L + + + +S T T + + + + R + + AT T+ Sbjct: 178 LTLKYVLGKDYMLHMQLSAQGMAGLFSPGTQTMDVNWKDKVRQQERGFTFENRYATLTY- 236 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 + E + W+ ++++++V I + ++ Sbjct: 237 -HKSEGGTDYLNEGKEITD--------EAIEDKIDWIAFKNQFFSAVMIAKNDFQNNALM 287 Query: 276 KYLSDGHARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHY------EKDLAI 327 + K ++ P + + G +F + KDL + Sbjct: 288 TSIPQEKGSGYLKQYEAKMKTFFDPTGKQASEFDFYYGPNDFRLLQKMEGECHFGKDLQM 347 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 R L + + + + N GI ++L T+ +KLL +P+ KK Y+S+A Sbjct: 348 QRLVYLGWPLFRIINRWFTLYVFDFLTGMNINMGIVLILITLLLKLLTYPMVKKSYMSSA 407 Query: 388 NMKNIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++PK+DE ++F + Q+ Q+AM+ Y + ++PL+GC P+L+Q P++ A++ Sbjct: 408 KMRVLKPKLDEATKQFNKPEDQMQKQQAMMSEYAKYGVSPLSGCLPMLIQAPIWIAMFNF 467 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQ 504 + ++++R + WIKDL+ DP + L + + ++ ++ Q Sbjct: 468 VPNAIQLRGES-FLWIKDLSTFDPIWEWNHNIWLIGDHLSLTCILFCVANVLYTVMTMRQ 526 Query: 505 MKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 K Q ++ WM PV+F F + + AGL Y+ S S + + Sbjct: 527 QKDQMVGQQADQMKMMQWMMFLMPVMFFFMFNDYSAGLNFYYFVSLFFSAAIMWAL-RKT 585 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 + L+ L + +N + Sbjct: 586 TNDEKLLAILEQRYQENKAN 605 >gi|154494956|ref|ZP_02033961.1| hypothetical protein PARMER_04002 [Parabacteroides merdae ATCC 43184] gi|154085506|gb|EDN84551.1| hypothetical protein PARMER_04002 [Parabacteroides merdae ATCC 43184] Length = 638 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 118/631 (18%), Positives = 243/631 (38%), Gaps = 75/631 (11%) Query: 1 MERNWNYFVAIALS--VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M+ N + L V+IV+ W P E++ +R+ ++ + + Sbjct: 1 MD--KNTIIGFLLIGIVLIVFTW---LNQPTPEQIEAQRRMQDSIARIEYAKQLEQQKEL 55 Query: 59 DDRAQA---------------------------LSMSPRVELKNPSLIGSINLKGAQFDD 91 + A+A + L+N + + KG + Sbjct: 56 NREAKADDELAGLPDSVRLARLQNTFGVFADAMVGEEGSTVLENELIEVRLANKGGRIGY 115 Query: 92 LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151 + L+ Y + + L ++ + D+ + + N+ ++ Sbjct: 116 VRLKKYD---NYKGEPLVLFDEKDS------KFDFTLVTADNRVVNTGDLYFTPVKGNDR 166 Query: 152 PTTPIKLVFKNANNILFERTISLDEHY-LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210 + ++L +++ F T+ D++ F I T N + + + Q Sbjct: 167 NSITMRLNTGEGSHLDFMYTLKPDDYMLQFSIKGTGLNGVLSPGTTALDLLWQQKITQQE 226 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 ++ + V + +Y K+ W+ D Y++S+ I E Sbjct: 227 KGR-KFEDRYATVYYKFMADDVEYLSETKNDSKQLSNRLKWVAYKDMYFSSILIAGNEGF 285 Query: 271 FHSQFKYL---SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + DG + K + + L G T + G +F + Y+ D+ Sbjct: 286 ESTTIDSKMLPEDGSFLKEYKTTTSVPFDLKGNEAT-DMRFYFGPNQFSLLKSYDDDVEK 344 Query: 328 P---RFEMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 E ++ GW + + L ++ + ++G+ I L TV VKL+ FPL K Sbjct: 345 ADQLDLEKIVPLGWGIFRWVNQYFVIPLFNFLGQFIHSYGLLIFLLTVIVKLILFPLTYK 404 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQIPVF 440 Y+S+A M+ ++P+++EL K+ V ++ A+++LY +P+AGC P+LLQ+P+ Sbjct: 405 SYMSSAKMRVLRPQVEELNAKYPGQDKAVERQRAIMELYSRAGASPMAGCVPMLLQMPIL 464 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSL 499 A++ ++E+RH + W DL+ D + + +P P F H+ ++ ++M++ Sbjct: 465 VALFMFFPSAIELRHQS-FLWAHDLSTYDAIVSWNTY--IPIITPYFGNHISLFCLLMTV 521 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVV----------FVFALSSFPAGLIIYWSWSNVIS 549 + I K + + GQ MP + + + + +GL Y+ S +I+ Sbjct: 522 TNIIYTKFNMDQTNTGQQQ----MPGMKAMMYMMPLMMLVFFNQYASGLTYYYFISTLIT 577 Query: 550 IVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 I+Q VI + E L+ +L K Sbjct: 578 ILQT-VIFRYTINEDKLLAKLEENKKKPMKK 607 >gi|163782852|ref|ZP_02177848.1| hypothetical protein HG1285_15991 [Hydrogenivirga sp. 128-5-R1-1] gi|159881973|gb|EDP75481.1| hypothetical protein HG1285_15991 [Hydrogenivirga sp. 128-5-R1-1] Length = 514 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 108/570 (18%), Positives = 216/570 (37%), Gaps = 74/570 (12%) Query: 3 RNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 F+A+ L ++ + F+ + + E+ KQ Sbjct: 9 DPKRIFIAMTLVAFLLLGYEIFSSFFFKGTPQQPVQQEKTEEPVKKQETPGGKKVEEPPT 68 Query: 59 DDRAQALSMSPRVELKNPSLI-----GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + + I+ KG + V + Sbjct: 69 PQLMLGTTREKHKPAETLKYSMGGFSVEISPKGGKIVSF--------VDEQFGFDLITDA 120 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 N Y E+ + +L N +++ K+ + + Sbjct: 121 EKKLNVYPLEIYTGDPDIDYDLNFGNYSVERKDNRLILTFRKGKI--------KLTKELE 172 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 + Y+ + + ++ + + + + + G+ + Sbjct: 173 FKDAYVLL---------TVKGDLDKKFYVLVGTHPFEQSFYTHEGPVLKLNGEV----VR 219 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + S + + G +Y+ F + + ++ Y +G + Sbjct: 220 IDKDDVSKREFIEGNIEFAGEESRYFFKGFKGNIKRVVINKVNYKPEGEEGEKEITFTYV 279 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 P L+ GAK + + E L+DWG KP+F+ M + Sbjct: 280 GYEEP-------LTLYMGAKYYSRLREL-------GLEDLLDWGMLKVAVKPLFIFMYWV 325 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y G++ ++I++ T ++++FFPL K S ++ P+++++++K+K P ++ Q+ Sbjct: 326 YEHTGSWVLSIVILTFLLRVVFFPLNYKSTTSMMKLQQAAPQLEKIKKKYKDDPAKM-QQ 384 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LY NP++GC PIL+QIPVFFA+YKV+ I+++++ WI LA DP Sbjct: 385 EMMKLYSEIGFNPMSGCLPILVQIPVFFALYKVLIITVDLK-LSGMLWIPSLADKDPFY- 442 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 I P+IM L+M +Q K++P P D Q +I+ V F F +S Sbjct: 443 ------------------ILPVIMGLTMILQQKVTPNP-DPKQNLIMYISAVAFTFLFAS 483 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL++YW+ +N+++I Q +I + + Sbjct: 484 FPSGLVLYWTVNNILNIGQNYLIKNVMLKK 513 >gi|196229389|ref|ZP_03128254.1| 60 kDa inner membrane insertion protein [Chthoniobacter flavus Ellin428] gi|196226621|gb|EDY21126.1| 60 kDa inner membrane insertion protein [Chthoniobacter flavus Ellin428] Length = 552 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 106/553 (19%), Positives = 209/553 (37%), Gaps = 58/553 (10%) Query: 37 RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 P A L S+ + +GA L+ Sbjct: 2 PPAGTPAGTPAGTPGETKPAAPAAPAAPAVPEKTETLDTDSVAYTFTTRGAGIAKALLKK 61 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVW-NLISGKILTPTTP 155 + + T N + T ++ N + + ++T Sbjct: 62 HEAEHG----------TRMTLNEFGDMPIGSVTDLPGQISNVAFHYATDLPAGVITFEGS 111 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT-- 213 + ++ +L++ Y+ + N S I Sbjct: 112 DERGLHLTKKFNVPKSTNLNKDYIVTMRLVFDNRSKQPITVPAYYVNTGSAAPVHQKDRI 171 Query: 214 -FGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + A D + E + + HE W ++D+Y+ ++ P ++ Sbjct: 172 DYTGFKWPGAKFVDVTWFSGGMFKKEHGTYTATHEGIPWAAVADQYFTTIVTPQVDSENK 231 Query: 273 SQ-----------------------FKYLSDGHARYQAKFSA----NEITILPGKSITTT 305 + +DG + + T+ PG+ Sbjct: 232 DTPSKERGNSVWATRFQISDDVWKATSHDADGSSSARYGIEGALGMPGFTLAPGQMQVQI 291 Query: 306 NFLFAGAKEFPTIHHYEKDL----AIPRFEMLIDW--GWFYFIAKPMFMLMSYFYNLVGN 359 ++ G +E+ + A F + + + F +K + ++ + VG+ Sbjct: 292 FHIYTGPREYGRLKTMPDGQVEVLAFSDFGGIFSFLGPFVGFFSKVLLYSLNSLHAWVGS 351 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + IAI++ T+ +K + +P+ K + M+ + PK+ E+REKF+ PQ + +++LY Sbjct: 352 YAIAIIIITLLIKAILWPMQNKATKAAKRMQALSPKMTEVREKFQD-DPQKMNAEVMKLY 410 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K + +NPLAGCWP +Q+P+FF Y ++ ++E+R+A + W++DL+ D +F L G+ Sbjct: 411 KEYGVNPLAGCWPAFIQMPIFFGFYNMLGKAVELRNA-KFLWVQDLSQPD--TVFHLPGL 467 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 V I PI M+ +M QMK SP D Q I+ MP++FV ++ + L Sbjct: 468 D-------FPVNILPIFMAATMVWQMKASPKTGDPQQQKIMMIMPLIFVLFCYNYASALA 520 Query: 540 IYWSWSNVISIVQ 552 +Y + +N++S+VQ Sbjct: 521 LYLTVNNLVSVVQ 533 >gi|312891415|ref|ZP_07750932.1| membrane protein insertase, YidC/Oxa1 family [Mucilaginibacter paludis DSM 18603] gi|311296109|gb|EFQ73261.1| membrane protein insertase, YidC/Oxa1 family [Mucilaginibacter paludis DSM 18603] Length = 609 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 106/598 (17%), Positives = 224/598 (37%), Gaps = 42/598 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + + L ++I++ + + P ++ E+ I + V D Sbjct: 1 MD--KNTYTGLFLIMLILFG-SFYLMRPSEADIKKEKARIHQDSLNKAGIKTTPVVAKTD 57 Query: 61 RA-----------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 A + + L+N L ++ +GA+ + L+ + Sbjct: 58 SAKKPQVIDSAVLKSAFGAATVGTEQLITLENNDLRVKVSTQGARVQSVELKNFKTF--- 114 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLIS-GKILTPTTPIKLVFKN 162 + + L +N L++++ I + + + I Sbjct: 115 DKKPLILFDGANNHFG----LNFIAGNKKINTNDLYFKPSATGLNVTGHDSYSITFRLNY 170 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ--TATNTFGVQEGF 220 + + +L + N + I S I T + ++ Sbjct: 171 SATQYIDYVYTLSAKGYRLGLTLKLNGLDNVIADSKIVDINWQSSMLKTEKDMTMERQYS 230 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + S + + + W+ ++++V I + S D Sbjct: 231 TVYFKNTDDDVDELSVTKDDAKDISDKKIQWVSFKQHFFSNVLIYKDGFT-KSSLHVSLD 289 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 + + K + I + + G EF + + + + L Y Sbjct: 290 TANKTEVKQMQASLQIPANNAGVYPLDFYYGPNEFKVLK--AQGYNLDKQIDLGWGPLKY 347 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + ++ + N+GI I+L TV +KL+ PL K Y+S A M+ ++P++DE++ Sbjct: 348 INKYAVLVVFDFLKQFGWNYGIVILLLTVLLKLVLSPLTYKSYLSMAKMRVLKPEMDEIK 407 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 K + P +LQ+ ++LYK +NPL GC P++LQ+P+ FA + E+R + Sbjct: 408 AKVGEDNPTLLQQEYMKLYKKAGVNPLGGCLPMVLQLPIVFAFLRFFPALFELRGES-FL 466 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-- 518 W+KDL+ D F L H+ + ++M++S FI + + M Sbjct: 467 WMKDLSTYDDLIKFGTTIPLLGD-----HLSLMCLLMTISTFIYTYFNNQISGATGQMKY 521 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 I PV+F+ L+ +P+GL Y+ +N+++ QQ +I ++ + + +++ K Sbjct: 522 IGYITPVIFIVVLNKYPSGLNYYYFLANMLTFAQQYLI-RLMVDDKKIHAQIQENKKK 578 >gi|261416142|ref|YP_003249825.1| membrane protein insertase, YidC/Oxa1 family [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372598|gb|ACX75343.1| membrane protein insertase, YidC/Oxa1 family [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327500|gb|ADL26701.1| inner membrane protein, 60 kDa [Fibrobacter succinogenes subsp. succinogenes S85] Length = 616 Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 110/630 (17%), Positives = 218/630 (34%), Gaps = 70/630 (11%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPR-------------IEEMNNERKNIQTVKQPNQVD 50 N N + L +IV W E + +++ P++ Sbjct: 2 NKNTLIGSILIAVIVIWWMAVNNANAEAQAAARAAQAKAKTEKQVAADSAKSLVIPSKTP 61 Query: 51 NSYAAV-----------------LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLN 93 AA +A V ++ I ++ KGA+ + Sbjct: 62 EIKAAPVLGGTDERRETKDESVDSAKVAPKAEIAERSVTVETDKFIMTLTNKGAKVKSII 121 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 ++ S L+ + + N + N + ++ + Sbjct: 122 VKALP---DSTGKFPELIQDTT------LGAFDLKLDNADLSEAMFELGNTPAKIVVNDS 172 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRI----MRHKPQT 209 ++ F++AN R+ + + + + P++ Sbjct: 173 AKVQFAFQDANGNQVIRSYGFTKEGP-AVRQENKFIGFQPTAYELAWKGGLKETEDIPKS 231 Query: 210 ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS---WLGISDKYWASVFIPS 266 G ++F+ + W G+ KY A Sbjct: 232 KGIMGIGGGGTYYFSEVVFNDRYSVEREMPREQASFNATEGKIVWAGLRRKYVAMTVQFD 291 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + K + + I + + + L ++ + KD Sbjct: 292 EAVPAVLKTKPMKVEDSEVDPGTYKLTIADDFRGAQSLSYDLMILPLKWDELSALNKDYE 351 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNL---VGNFGIAIMLTTVFVKLLFFPLAKKQY 383 G + ML+ + N+G+AI+L T+ V+ + P KQ Sbjct: 352 KIIVSGWSWCGADVWFVWICKMLLKLLNLFYSIIPNYGVAIILVTLIVRGVTTPFTVKQI 411 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA----GCWPILLQIPV 439 ST M ++P++DE+ K++ + PQ Q AM++LY +NINPLA GC P+L+Q+P+ Sbjct: 412 KSTRGMAALKPQLDEINVKYR-TDPQKKQAAMMELYSKNNINPLASCTGGCLPMLIQMPI 470 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F ++ V+ ++E+R AP + WI DL+ +D + +P +P + I P +M Sbjct: 471 FMGLFFVLGRAIELRGAPAFLWISDLSRSD---VVWNGISIPIIMPS--GLAILPWLMVA 525 Query: 500 SMFIQMKMSP---PPADKGQAMILNWMPVVF-VFALSSFPAGLIIYWSWSNVISIVQQAV 555 + + Q K++ D Q ++ WM + + P+GL++YW N+ SI Q Sbjct: 526 TTYFQTKVTMGANAGMDPAQQKMMVWMMPAMMLLFSAVMPSGLVLYWIIGNIWSIAQYKY 585 Query: 556 IMKM----HGAEIGLIDRLRSTFSKNYNSQ 581 I +G + +L+ +++ Sbjct: 586 IYSKFPPVNGNKPAASSKLKG--KNVKDAE 613 >gi|288927879|ref|ZP_06421726.1| inner membrane protein OxaA [Prevotella sp. oral taxon 317 str. F0108] gi|288330713|gb|EFC69297.1| inner membrane protein OxaA [Prevotella sp. oral taxon 317 str. F0108] Length = 627 Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats. Identities = 111/610 (18%), Positives = 231/610 (37%), Gaps = 48/610 (7%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ--------------- 48 N N + L +++ + + E ++K + K + Sbjct: 2 NKNNLIGFILIGLVLIGFSLWNRPSEEELAKQQQKELIEKKNKEEQTKAKAKADAARAQA 61 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 ++ + + + + LKN L +N KG D + + + + Sbjct: 62 LEQATTDTAALFHKALIGEAKPIVLKNSKLTLQLNTKGGVVDKVIISNFTDRNGHKDLTL 121 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 + + + YVSTA+ P+ T + + + + N + Sbjct: 122 FQGKDQSLNYTFSTKDGYVSTADLFFTPSEVTDTTVTFTAEAAAGKTLTIKYVLDNEYML 181 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 +IS T + Q R + + + + + A+ T+ EG L + S Sbjct: 182 HTSISATGMGGILNPSVNTVDINWQERCAQQEKGFTFENRYASLTYHKTEGGTDYLSESS 241 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + + W+ ++++++V I + ++ + K Sbjct: 242 EKIDE----------VIEDKIDWVAFKNQFFSAVMIAKTDFGTNATLTSIPQEKGSGYLK 291 Query: 289 FSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWFYFIA 343 ++ P S T + G +F + E + E L+ GW F Sbjct: 292 QYQAKLKTAFDPTGSQPTQLDFYYGPNDFRLLQKMESKSHFGKDLELERLVYLGWPLFRI 351 Query: 344 KPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + F L N G+ ++L T+ +K + FPL KK Y+S+A M+ ++PK++E Sbjct: 352 INRWFTLYVFDWLTGLNINMGVVLILITLLLKFITFPLVKKSYLSSAKMRVLKPKLEEAT 411 Query: 401 EKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 ++F + Q Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + ++++R + Sbjct: 412 KEFNKPEDQMKKQQAMMSEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGES-F 470 Query: 460 GWIKDLAAADPT-----NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 WIKDL+ DP NI+ + L F + +M Q + Sbjct: 471 LWIKDLSTYDPVLEWGHNIWLIGDHLSLTCILFCLSNVLYSMM---TMRQQRDQMVGQQA 527 Query: 515 GQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 Q ++ WM PV+F F + + +GL Y+ S S ++ + + L+ L Sbjct: 528 EQMKMMQWMMYLMPVMFFFMFNDYSSGLNFYYFVSLFFSAAIMWLL-RKTTNDEKLLSIL 586 Query: 571 RSTFSKNYNS 580 + + + N+ Sbjct: 587 EANYKEAQNN 596 >gi|310825627|ref|YP_003957985.1| inner membrane protein, 60 kda [Stigmatella aurantiaca DW4/3-1] gi|309398699|gb|ADO76158.1| Inner membrane protein, 60 kDa [Stigmatella aurantiaca DW4/3-1] Length = 607 Score = 204 bits (518), Expect = 4e-50, Method: Composition-based stats. Identities = 118/594 (19%), Positives = 206/594 (34%), Gaps = 63/594 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK--------------NIQTVKQPN 47 + A+ +S + + F + Sbjct: 13 DSQKRMLTALGVSFAAITIYMMFLAPTAPTAPEPGAADAGVAAGAADGGTLAVPAPPPGG 72 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH----LDVSS 103 A + + R + + + +GA F L+G +S Sbjct: 73 GTPELAAGESPPEPEAPVRTLERTRQEA---KYTFSSEGAGFTSAVLQGPKMREQQSLSV 129 Query: 104 NSPIVTL----LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 L L P N + S N + Sbjct: 130 AEGYKELFGAELLPPPQMNLVQPVPGQPLPLSVSIEGTSPLPANARYQVQEAGEGTVVFT 189 Query: 160 FKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + + +R + + V N S + R R + G Sbjct: 190 TRRGPWEVVKRVQWPNAGHELTYTVQVHNTSSQPLTGELRVHHNRAIDPNFEHAPSFFGG 249 Query: 220 FIAVLGDKSLVEQKYSDIEKSSI--SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 V +K F + GI +Y+ S+ P + Sbjct: 250 VGNQSRAACHVGEKLHKRVPEDEASETFSGPVHYFGIDQQYFLSMLYPLEAPREGHCVLT 309 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH-----------HYEKDLA 326 + + F +T+ G+++T + G K+ + Sbjct: 310 ATPTVRQVAVGF---PLTVGAGETVTVRFGGWFGPKDPDLLKPVPSQEVLSAAGMTAAAW 366 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P E +D+G + I K + M +F+ + GN+G+AI+L TV VKL+ PL K V Sbjct: 367 DPTIEETVDFGIWAVICKLLLFFMKWFHAVTGNWGVAIILLTVLVKLVLLPLTYKSMVGM 426 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 +K +QPK++E+R+KF + + + +++LY+ +NPL GC P+L+Q+PV+ A++ Sbjct: 427 EAVKELQPKMEEIRKKFAE-DRERMNMEVMKLYQQAKVNPLGGCLPLLIQMPVWIALFTA 485 Query: 447 ISISLEMRHAPFWGW-IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + S ++ PF+G +DL DPT + P+ + +SM I Sbjct: 486 LRNSFDIYWEPFFGPVWRDLTYKDPTY-------------------LLPLALGVSMIITQ 526 Query: 506 KMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 KM P D QA I+ W MP++F L +PAGL +Y +N++SI QQ + K Sbjct: 527 KMQPQMMDAAQARIMIWVMPIIFTLTLLQYPAGLSLYIFTNNLLSIGQQWGLRK 580 >gi|313674427|ref|YP_004052423.1| membrane protein insertase, yidc/oxa1 family [Marivirga tractuosa DSM 4126] gi|312941125|gb|ADR20315.1| membrane protein insertase, YidC/Oxa1 family [Marivirga tractuosa DSM 4126] Length = 617 Score = 204 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 115/607 (18%), Positives = 212/607 (34%), Gaps = 64/607 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ---PNQVDNSYAAVL 57 M+ N + L I++ A+ F+ + N E ++ Q N+ A Sbjct: 1 MD--KNQATGLILISILMIAYFWFFADAPQQPENIESNQVEQNDQQQKETTASNTNQAAA 58 Query: 58 IDDRAQALS----------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL-- 99 + + +L+ S ++ N KG + + L+ + Sbjct: 59 VIESDSSLNRSLVNQFGAFAGVAKGESQISTFNTETIAIQFNSKGGKVKSVELKDFKTFD 118 Query: 100 ------DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 + L + + + + + + L N T Sbjct: 119 GQPLIITNEEDEEKELLFNTAAGEVNLYDLYFEMQGSPKRNLSN-------------GDT 165 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNT 213 IK V + A N E+ +L + N ++I K + Sbjct: 166 IQIKFVAQVAPNKSIEQIYTLSGNQYQVGYSLAFNGFTNEILGDQLTLRWNKKMRKFEKD 225 Query: 214 FGVQEGFIAVLGDKSLVEQK-YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE-TSF 271 + + + S+ E W ++ I Sbjct: 226 LEQSRTKVTMNYYSTEEGMDGLSERSDDDSEEVAEPVKWFSFKQNFFMEALITDIPMKRA 285 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 + + EI + + + G + T+ P FE Sbjct: 286 EFATDIEDLSDEYVKRGKAKVEIPLSEVSNRAGEFKYYFGPNNYKTLQKVA-----PDFE 340 Query: 332 MLIDWGWFYF---IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + GWF + + + ++G I++ + +KL PL+ K YVS A Sbjct: 341 ENVYLGWFPISLVNKYVIINVFYILEKYISSYGWIIIILVLLIKLALSPLSYKSYVSMAK 400 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 K ++P++DE++EK Q Q + LY+ +NPL+GC P+LLQ+P+ FA++ Sbjct: 401 TKVLKPQLDEIKEKH-GGDMQKAQADQMDLYRKVGVNPLSGCIPLLLQMPILFAMFYFFP 459 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI---QM 505 S+E+R + W DL+ D ++ +L +PFY HV ++ I+M+LS + Sbjct: 460 SSIELRQES-FLWATDLSTYD--SVLSLPFEIPFYG---DHVSLFTILMTLSTLLITWSQ 513 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 I +MPV+F+F L+SFPA L Y+ +N+I+ QQ +I + E Sbjct: 514 GQVSSVQGPM-KNIQYFMPVIFMFVLNSFPAALSFYYLIANLITFGQQTLI-RRMIDEDK 571 Query: 566 LIDRLRS 572 + L Sbjct: 572 IKQILEE 578 >gi|189501692|ref|YP_001957409.1| putative inner membrane protein translocase component YidC [Candidatus Amoebophilus asiaticus 5a2] gi|254772744|sp|B3ER28|OXAA_AMOA5 RecName: Full=Membrane protein oxaA gi|189497133|gb|ACE05680.1| hypothetical protein Aasi_0237 [Candidatus Amoebophilus asiaticus 5a2] Length = 596 Score = 204 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 100/575 (17%), Positives = 211/575 (36%), Gaps = 33/575 (5%) Query: 21 WQNFY----VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNP 76 + +F+ + E + + Q + + ++ + L+N Sbjct: 19 YTHFFDNKLPKTSQQTTTQEVAHNTSNIQLQTSEATLNLQTGIFAKATQGVTKDIILENK 78 Query: 77 SLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELP 136 + +++ GA+ ++ L+ Y + + LL +T + + S N Sbjct: 79 DIRVTLSSHGAKVKEVILKQYKDYLG---KPLKLLDEQSTNMGFQFTSNQASINTNTLFF 135 Query: 137 NSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRF 196 N++ + + + + + + + + Sbjct: 136 NTDDT---DQYIQQASIGKVTFMIPLGEPNQYLQQVYTLPSEGYALTQNWEFVGTENYID 192 Query: 197 SPRGRIMRHKPQTATNTFGV---QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 + + H + I + E+ WL Sbjct: 193 QGKIDFVWHDFIKRAEKDVQACRNKTTINYYLANKTFKHLKEHTEQKEEQTIQTPIQWLA 252 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT--TNFLFAG 311 I +++ + + + + ++ + T + G Sbjct: 253 IKQRFFTAGIFTDQPFESGNILLKPTTQPDKFVKEAYTTVSLASNNLQPIQKGTFRFYFG 312 Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + ++ + + F + GW + + + S+ V N+G+ I++ Sbjct: 313 PNTYKDLNSFAQ-----GFSKNLPLGWPIVKWINLYLIIPIFSFIEKYVSNYGLVILILV 367 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 +F+KLL PL+ K Y+S A MK ++P +D L+ K+ Q +Q ++LY+ INPL+ Sbjct: 368 IFIKLLLLPLSYKSYISMAEMKVLKPTLDALKAKYGN-DMQSVQMEQVKLYREMGINPLS 426 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+LLQ+P+ A++ ++++R + W DL+ D I L +PFY Sbjct: 427 GCIPVLLQMPILLAMFNFFPNAIDLRQK-AFLWAPDLSTYD--AIINLPFQIPFYGS--- 480 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKG--QAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 HV ++ ++M+ S + S + +P+ F+F L+SFPAGL Y+ SN Sbjct: 481 HVSLFTLLMTASTILYTWSSNQVNTPQGPMKTMSYLLPITFMFILNSFPAGLSFYYFVSN 540 Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + QQA+I K E + +L K+ N++ Sbjct: 541 LFTFAQQALI-KRFVNEDKIKAKLAKNKEKSANNK 574 >gi|120436565|ref|YP_862251.1| putative inner membrane protein translocase component YidC [Gramella forsetii KT0803] gi|117578715|emb|CAL67184.1| inner membrane protein OxaA [Gramella forsetii KT0803] Length = 616 Score = 204 bits (517), Expect = 5e-50, Method: Composition-based stats. Identities = 98/609 (16%), Positives = 220/609 (36%), Gaps = 61/609 (10%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYP------------RIEEMNNERKNIQTVKQ 45 ME + L ++ W + P ++E+ + + Sbjct: 1 MEEKKIDVQSIIGFILIGGLLL-WMLYNNTPEETETENSTTTEQVEQEPRDNQVTTNNSN 59 Query: 46 PNQVDNSYAAVLID--------DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY 97 +Q ++S + + + N L I+ KG ++ L+ + Sbjct: 60 TSQTNDSTSLADAQRRLGAFGYSETLTSAQGGSTTISNDLLELKISNKGGYIEEARLKNF 119 Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 +S + L+ N T N L + +I +K Sbjct: 120 KT---YDSIPIYLIKDGNASLNMSFTTTDGRTLNTENLYFEPELTESNGNQI----LSMK 172 Query: 158 LVFKNANNILFERTISLDEHY-LFKIVDTVTNN-SIDQIRFSPRGRIMRHKPQTATNTFG 215 L + + + E+ F + + ++ ++ + + Sbjct: 173 LKVSEDEYLEYRYAMRPGEYMLDFSVRSEGLTGVLNSAETPTLDWKLKGYRHAKSISYEN 232 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ- 274 I + + IS ++ +++S+ + S Sbjct: 233 RYTDLIYEYDGGDDDSVSDGEDDDEDIS-------YIAYRQHFFSSILLTDNPFKTSSFK 285 Query: 275 ---FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 + + F++ L + + G ++ ++ Y D + Sbjct: 286 VENLVEDEEVDTVFTKTFASTIPLELKAGELNYNMNWYYGPSDYKILNDY--DRNLDEIV 343 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 L + + ++ + ++GIAI+ T+ V+++ P+ K Y+S A MK Sbjct: 344 PLGWGIFGWINKYIFIPFFAFLAGFLPSYGIAIIAMTIVVRIVLSPVTYKSYLSQAKMKI 403 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++P+I+EL EK+K + + Q+ ++LY +P++GC P L+QIPVF+A+++ + Sbjct: 404 LKPEINELNEKYKDNAMKK-QQETMKLYSKAGASPMSGCLPALMQIPVFYALFQFFPSAF 462 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---- 507 ++R + W DL++ D + L + FY HV ++PI+ S+++F+ M M Sbjct: 463 QLRQKS-FLWADDLSSYDV--VAELPFHIWFYG---DHVSLFPILASIAIFVYMMMTTGQ 516 Query: 508 ----SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + P ++ P+ + +++ +GL +Y+ SN+I+I VI E Sbjct: 517 SMQANQQPGMPNMKFLMYLSPLAMLVFFNNYASGLSLYYFTSNLITIGIMLVIKYAIIDE 576 Query: 564 IGLIDRLRS 572 + +++ Sbjct: 577 DKIHAKIQE 585 >gi|261879826|ref|ZP_06006253.1| inner membrane protein OxaA [Prevotella bergensis DSM 17361] gi|270333484|gb|EFA44270.1| inner membrane protein OxaA [Prevotella bergensis DSM 17361] Length = 636 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 114/613 (18%), Positives = 232/613 (37%), Gaps = 49/613 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + L +++ + +Y P EE + A Sbjct: 1 MD--KNSLIGFVLIAVVLIGFS-WYAQPSEEEQRAQFVKDSIAHVNRAKAEKDAKAAAFK 57 Query: 61 RA-----------------QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 R + V LKN L + + KGAQ ++ Y +++ Sbjct: 58 RQQAARQQVQEDTTALFHHALTGQAQDVVLKNDKLELTFSTKGAQVKKAVVKNYKDNITE 117 Query: 104 NSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 VTL Y A+ +STA+ + T ++ I++++ Sbjct: 118 KKD-VTLFQGDEQSIEYMLVAKEANISTADLFFQTSEVTDSTVVFTAEAGAGKTIRMIYS 176 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 ++ L + +T T Q + + + + + AT T+ +G Sbjct: 177 LGDSYLLRMKFQVSGMAGLFAPNTSTMAINWQDKVRQQEKGFAFEARYATLTYHESDGGT 236 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 L + + ES W+ ++++++V I ++ + Sbjct: 237 DYLNASNEKIDE----------EIKESIDWVAFKNQFFSAVMIAKDNLGTNTLMTSIPQE 286 Query: 282 HARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDW 336 K ++ P + T + G +F + E++ A + E L+ Sbjct: 287 KGSGYLKQYQAKMKSFFDPTGNTPTEFEFYYGPNDFRLLQSVEEESAFGKDLQMERLVYL 346 Query: 337 GWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 GW F + + F L GI ++L T+ +K + +P+ KK Y+S+A M+ ++P Sbjct: 347 GWPLFRIINRWFTIYVFDWLSKWFPMGIVLILITLLLKAITYPMVKKSYMSSAKMRVLKP 406 Query: 395 KIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 K+D ++F + Q+ Q+AM+ Y + ++PL+GC P+L+Q P++ A++ + ++++ Sbjct: 407 KLDAATKQFDKPEDQMQKQQAMMAEYAKYGVSPLSGCLPMLIQAPIWIAMFNFVPNAIQL 466 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMKMSPPP 511 R + W+ DL+ DP + L + II S K Sbjct: 467 RGES-FLWMDDLSTYDPILQWNTNLWLIGDHLSLTCILFCGAQIIYSWFTMQMQKDQMVG 525 Query: 512 ADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 Q ++ W MP++F F + + +GL Y+ S ++S +++ E L+ Sbjct: 526 QQAEQMKMMQWMMYLMPLMFFFIFNDYSSGLNFYYFVSLIMSAAI-MFVLRKTTNEEKLL 584 Query: 568 DRLRSTFSKNYNS 580 L + + +N N+ Sbjct: 585 AILEARYKENQNN 597 >gi|281420428|ref|ZP_06251427.1| inner membrane protein OxaA [Prevotella copri DSM 18205] gi|281405573|gb|EFB36253.1| inner membrane protein OxaA [Prevotella copri DSM 18205] Length = 645 Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats. Identities = 106/616 (17%), Positives = 246/616 (39%), Gaps = 52/616 (8%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE-----------RKNIQTVKQPNQVDNS 52 N N + L +++ + +Y P EE + + K + Sbjct: 2 NKNNIIGFLLIAVVLIGFS-WYNQPSAEEQRAAFVQDSIAKAKHAEMEKASKSAAAKRQT 60 Query: 53 YAAVLIDDRAQAL------SMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------LD 100 A ++ + AL + ++ LKN + ++N KGA + ++GY D Sbjct: 61 NAKAKVEADSTALFYSALKGQAKKIVLKNEKVELTLNTKGATVEKAVIKGYVGHNLQVKD 120 Query: 101 VSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 S+++ VTL ++ + A+ + T++ P++ T ++ + + L Sbjct: 121 GSADAKDVTLFDGNDQSLKFMLEAKEANIITSDLYFTPSNVTDKSVTMTAVAGEGKTLTL 180 Query: 159 VFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 + ++ + ++ + + + + + R + + T T+ E Sbjct: 181 TYTLGDDYMLHMSLQANGMADLFSPNYNKMDVDWSDKARQQERGFMFENRYTTLTYHNAE 240 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 G L + S + E+ W+ +++++++ + + + Sbjct: 241 GGTDHLNEGSEKIDE----------KIEETIDWVSFKNQFFSAIIVAKDNFEKDAFMTSI 290 Query: 279 SDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEML 333 K ++ P + + G +F + + EK+ + F+ L Sbjct: 291 PQEKGSGYLKQFQAKMKTAFDPTGKKASEFEFYFGPNDFQILKNTEKESTFGKDLEFQKL 350 Query: 334 IDWGWF--YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + GW +I + + + + + V GI ++L T+ +KL+ +P+ KK Y+S+A M+ Sbjct: 351 VYLGWPIIRWINRFFTLYVFDWLSNVFPMGIVLILITLLLKLITYPMVKKSYMSSAKMRV 410 Query: 392 IQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++PK++ ++ + Q+ Q+AM+ Y + ++PL+GC P+L+Q+PV+ A++ + + Sbjct: 411 LKPKLEAATAQYNKPEDQMQKQQAMMAEYAKYGVSPLSGCLPMLIQMPVWIAMFNFVPNA 470 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKMS 508 +++R + W+ DL+ DP + L + + ++ S Q + Sbjct: 471 IQLRGE-KFLWMNDLSTFDPIFEWNTNIWLIGDHLSLTCILFCVANLLYSWMTMRQQRDQ 529 Query: 509 PPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q ++ WM P++F F + + AGL Y+ S S + + + Sbjct: 530 MVGQQAEQMKMMQWMMYLMPLMFFFMFNDYSAGLNFYYFISLFFSAAIMWTL-RKTTDDE 588 Query: 565 GLIDRLRSTFSKNYNS 580 L+ L + +N N+ Sbjct: 589 KLLAILEKRYQENKNN 604 >gi|86132804|ref|ZP_01051396.1| 60 KD inner membrane protein [Dokdonia donghaensis MED134] gi|85816758|gb|EAQ37944.1| 60 KD inner membrane protein [Dokdonia donghaensis MED134] Length = 628 Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats. Identities = 112/610 (18%), Positives = 225/610 (36%), Gaps = 64/610 (10%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEE-------MNNERKNIQTVKQPNQVDNSYAAVLI 58 N + + L I+ W ++ P EE + ++ T V + AV Sbjct: 8 NSLIGMLLMGGILL-WIIYFNKPTAEELEAEKAAQTEQVESQDTDVASLPVAQTAPAVAS 66 Query: 59 DDRAQ-----------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 D A + + N L ++ KG ++ + + Sbjct: 67 DSIANIALQNRLGAFAYSGSLPSAKEGATTTISNDVLEIKVSNKGGYITEVKMLQHST-- 124 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 +S V L+ N+ + + ++ N+ ++ S + + K Sbjct: 125 -YDSIPVYLIKDGNS------TFNVSFSTSDNRNLNTKDLFFEPSLSKNGNNDVLSMKLK 177 Query: 162 NANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 +NN E L E + ++ S R+ E Sbjct: 178 VSNNEYLEYRYELKEGDYMMDFGMRSQGLSTRLNTSNPMRMQWDFKGMRHARSQSYENRY 237 Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL--- 278 L K ++ E W+ +++S+ I Sbjct: 238 TRLTYKYEEDKTDKLSPAGDDDEIEEDLVWMNYRQHFFSSMLISETPFKEARLTSKDLYK 297 Query: 279 ----SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 D + ++ ++ + + ++ G ++ + Y++ L M + Sbjct: 298 EADDRDEETIFTKQYGSDVLLEAKNGELDYAMQMYYGPTDYTILKSYDQGLDEA---MPL 354 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 WG F F+ K + + F + GIAI++ T+ +KL P+ KQY S A MK ++P Sbjct: 355 GWGIFGFLNKYLVIPFFGFLSGFLPAGIAIIVMTIVIKLFLSPVQYKQYTSQAKMKILKP 414 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +I + EK+K + + Q+ + LY +P AGC P LLQIPVF+A++ + ++R Sbjct: 415 EIAAISEKYKDNAMKK-QQETMALYSKAGASPAAGCLPALLQIPVFYALFTFFPSAFDLR 473 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPP 511 + W DL++ D I L +PFY HV ++PI+ ++++F M++ + Sbjct: 474 GKS-FLWADDLSSYD--EIAKLPFEIPFYG---DHVSLFPILAAVTIFFSMRLTTGNQQM 527 Query: 512 ADKGQAMI----------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 Q + + + P++ + + + +GL +Y+ SN+++I VI + Sbjct: 528 QQPTQEGMPDMSKMMKYMMYFSPLLMLVFFNQYASGLSLYYFISNLLTIGIILVIKNVII 587 Query: 562 AEIGLIDRLR 571 E + ++ Sbjct: 588 DEEKIRAKIE 597 >gi|282879875|ref|ZP_06288602.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella timonensis CRIS 5C-B1] gi|281306269|gb|EFA98302.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella timonensis CRIS 5C-B1] Length = 626 Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats. Identities = 100/603 (16%), Positives = 231/603 (38%), Gaps = 46/603 (7%) Query: 10 AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS--- 66 + L +++ + + E+ +++ ++ + + + A + Sbjct: 3 GLVLMGLLLIGFSWWSQPSAEEQAKKMQQDSIAAVTQHKAELAKQQAHAKEIADLKAKQK 62 Query: 67 -------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + V LKN L S+N KG ++ + ++P V L Sbjct: 63 ADTTALFHAALEGQAQEVVLKNEHLELSVNTKGGTVSKAIIKNFKDR--EDNPDVVLFDD 120 Query: 114 SNTKNAYFAELD--YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 K + ++T + P++ T L + + ++ + L + Sbjct: 121 KVQKLNFIMSTKEANIATQDLYFSPSAQTDSTLTLTADAGQGKSLVIQYRLGADYLLHMS 180 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 + ++ +T N + + + + + AT T+ +G Sbjct: 181 MKVNGMNGLFAPNTKFMNVDWTDKCRQQEKGFTFENRYATLTYHKVKGG----------T 230 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 +K S+ + + W+ ++++++V I + S + + K Sbjct: 231 KKLSEASEEIDKKIDDKIDWVAFKNQFFSAVMIAKHDFSEEALMTSVPQEKGSGYLKAYQ 290 Query: 292 NEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWFYFIAKPM 346 ++ P + + G +F ++ EK+ + + L+ GW F Sbjct: 291 AKMQTFFDPTGQKASEFEFYFGPNDFRLLNRIEKESTFNKDLELQRLVYLGWPLFRIINR 350 Query: 347 FMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + + F L G+ ++L T+ +KL+ +P+ KK Y+S+A M+ ++PK++ ++ Sbjct: 351 WFTIYVFDWLSKWFPMGVVLILITLLLKLITYPMVKKSYMSSAKMRVLKPKLEAATAQYN 410 Query: 405 QSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + ++++R + WI Sbjct: 411 KPEDQMQKQQAMMAEYSKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLRGES-FLWIN 469 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 DL+ DP + L + I ++ S Q + Q ++ Sbjct: 470 DLSTYDPIIQWNKNIWLIGDHLSLTCILFCIANVLYSWMTMRQQRDQMVGQQAEQMKMMQ 529 Query: 522 W----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 W MPV+F F + + AGL Y+ S S + + + L+ L + + +N Sbjct: 530 WMMYLMPVMFFFMFNDYSAGLNFYYFVSLFFSAAIMWTL-RKTTNDAKLLQILEARYEEN 588 Query: 578 YNS 580 + Sbjct: 589 KAN 591 >gi|315224395|ref|ZP_07866228.1| inner membrane protein OxaA [Capnocytophaga ochracea F0287] gi|314945671|gb|EFS97687.1| inner membrane protein OxaA [Capnocytophaga ochracea F0287] Length = 621 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 115/609 (18%), Positives = 233/609 (38%), Gaps = 55/609 (9%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------TVKQPNQVDN 51 ME + L I++ W P EE+ + + T Q + Sbjct: 1 MEEKKFDLKSIIGFTLIFILLM-WFMNNNKPSEEELAKRKAQQEQQANQATNTQKDTHTA 59 Query: 52 SYAAVLIDDRAQ----------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 ++ + D A + L+N + +I+ +G Q ++ L+ Sbjct: 60 TFQGIPTDSVALEKYKANLGAFAYSATLPSAKDGVTVLENKDIKLTISNRGGQPKEVLLK 119 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 + +S V L+ N T ++ +L T+ K+L+ Sbjct: 120 EFKT---YDSLPVYLIKDWNATFNLSFTTAQNQTLSSKDLYFEPTLSENNGNKVLSMKLK 176 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + + + + + N+ + + + R + Sbjct: 177 TSENAYLEYVYTLPKEGYMLDVAVRSQGLSGVVNTSKPMNIDWKLQARRMEKSVT----- 231 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 E + ++ + + E +W+ + SV I + Sbjct: 232 -YENRYTQATVQYDGDRISRLSQGGNDEQKEEKVNWVAYKQHLFTSVLISDNPFAKGDFV 290 Query: 276 KYLSDGHARYQAKFSANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 + K++ N +T LP ++ + + G ++ + Y + Sbjct: 291 SHNIAMSEGKDVKYTKNFLTSLPIQAKSGELSESLHFYFGPSDYNVLKQYNDKYELTEL- 349 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + + WG F ++ K +F+ + F + G+ I+L T+ V+LL P+ K YVS A MK Sbjct: 350 IPLGWGIFGWLNKWLFIPLYNFLTDYFSVGLVIILMTIIVRLLLSPIVYKSYVSQAKMKV 409 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++P+I+E+ +K+ P Q+ + LY +NPL+GC P LLQ+PVF A++ Sbjct: 410 LRPEIEEINKKY--EEPMKRQQETMALYNKAGVNPLSGCIPALLQLPVFLALFNFFPTEF 467 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP- 510 +R + W DL++ D IF L +PFY HV ++P++ S+++FI M+ Sbjct: 468 GLRQKS-FLWAHDLSSYD--AIFELPFSIPFYGS---HVSLFPLLASVAIFIYSMMTMAQ 521 Query: 511 PADKGQAMI--LNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 A Q + + ++ PV+ +F +++ +GL +Y+ SN+++I I E Sbjct: 522 TAQPQQPGMPNMKFLIYLSPVMMLFFFNNYASGLSLYYFISNLLTIGIMLAIKYWIIDEQ 581 Query: 565 GLIDRLRST 573 + +++ Sbjct: 582 KIHAQIQEN 590 >gi|256819005|ref|YP_003140284.1| putative inner membrane protein translocase component YidC [Capnocytophaga ochracea DSM 7271] gi|256580588|gb|ACU91723.1| 60 kDa inner membrane insertion protein [Capnocytophaga ochracea DSM 7271] Length = 621 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 118/609 (19%), Positives = 233/609 (38%), Gaps = 55/609 (9%) Query: 1 MERNW---NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQ------TVKQPNQVDN 51 ME + L I++ W P EE+ + + T Q + Sbjct: 1 MEEKKFDLKSIIGFTLIFILLM-WFMNNNKPSEEELAKRKAQQEQQANQATNTQKDTHTA 59 Query: 52 SYAAVLIDDRAQ----------------ALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 ++ + D A + L+N + +I+ +G Q ++ L+ Sbjct: 60 TFQGIPTDSVALEKYKASLGAFAYSATLPSAKDGVTVLENKDIKLTISNRGGQPKEVLLK 119 Query: 96 GYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP 155 + +S V L+ N A + T + +S ++ + Sbjct: 120 EFKT---YDSLPVYLIKDWN------ATFNLSFTTAQNQTLSSKDLYFEPTLNENNGNKV 170 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + + K + N E +L + V + + S I Sbjct: 171 LSMKLKTSENAYLEYVYTLPKEGYMLDVAVRSQGLSGVVNTSKPMNIDWKLQARRMEKSV 230 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 E + ++ + + E +W+ + SV I + Sbjct: 231 TYENRYTQATVQYDGDRISRLSQGGNDEQKEEKVNWVAYKQHLFTSVLISDNPFAKGDFV 290 Query: 276 KYLSDGHARYQAKFSANEITILP----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 + K++ N +T LP ++ + + G ++ + Y + Sbjct: 291 SHNIAMSEGKDVKYTKNFLTSLPIQAKSGELSESLHFYFGPSDYNVLKQYNDKYELTEL- 349 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + + WG F ++ K +F+ + F + G+ I+L T+ V+LL P+ K YVS A MK Sbjct: 350 IPLGWGIFGWLNKWLFIPLYNFLTNYFSVGLVIILMTIIVRLLLSPIVYKSYVSQAKMKV 409 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++P+I+E+ +K+ P Q+ + LY +NPL+GC P LLQ+PVF A++ Sbjct: 410 LRPEIEEINKKY--EEPMKRQQETMALYNKAGVNPLSGCIPALLQLPVFLALFNFFPTEF 467 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP- 510 +R + W DL++ D IF L +PFY HV ++P++ S+++FI M+ Sbjct: 468 GLRQKS-FLWAHDLSSYD--AIFELPFSIPFYGS---HVSLFPLLASIAIFIYSMMTMAQ 521 Query: 511 PADKGQAMI--LNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 A Q + + ++ PV+ +F +++ +GL +Y+ SN+++I I E Sbjct: 522 TAQPQQPGMPNMKFLIYLSPVMMLFFFNNYASGLSLYYFISNLLTIGIMLAIKYWIIDEQ 581 Query: 565 GLIDRLRST 573 + +++ Sbjct: 582 KIHAQIQEN 590 >gi|218960871|ref|YP_001740646.1| Preprotein translocase subunit YidC (modular protein) [Candidatus Cloacamonas acidaminovorans] gi|167729528|emb|CAO80439.1| Preprotein translocase subunit YidC (modular protein) [Candidatus Cloacamonas acidaminovorans] Length = 543 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 107/538 (19%), Positives = 207/538 (38%), Gaps = 52/538 (9%) Query: 41 QTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 QTV +P + D ++D ++L N + + N +G + L + Sbjct: 44 QTVTEPVKPDTIIITPMLDTLLAKGKTPEIIKLSNQLMTVTFNSRGGSIQQVELHNF--- 100 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 + +S V L+ +++ A++ + L + + + + + Sbjct: 101 IMHDSTKVKLIPENSS----LADVKLIHPTAETPLKDVIFQYRISP-----DSLGVTFFL 151 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + N ++ +LD Y V N + + + Sbjct: 152 GDETNSQISKSFALDNQYGISFSINVENYQVINGIEVDFSCGIADTETVTKSKQQDYRFM 211 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 + + + ++K S S +W+ + KY+ + + + Sbjct: 212 YYADN--EIFKTTLAKMKKKQPSGNLNSFNWMALRGKYF--TLVLKENEPALVRSFRTEL 267 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 F + P +S + + ++AG ++ + Y K + W Sbjct: 268 NPQTGNPAFVIDSKQSNPKQSWSQSFIIYAGPTDYQILQKYGKQMDNIPE---RGASWLR 324 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 ++A ++ + + + N+G+ I++ V +KLL PL + Q V + + +QP I+E+R Sbjct: 325 WLANIFEWILKFLHRYIKNYGVVILIFAVIIKLLLHPLTQHQMVHSMRQQKMQPYIEEIR 384 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 +K+ + ++ + +LYK + + AGC P+L+QIP+ +Y V+ SL+MR+A F Sbjct: 385 KKYANDVVK-QREELTKLYKENKTSMTAGCLPLLIQIPILIPLYNVLRYSLDMRNASFCL 443 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQA-- 517 W+KDL+ DP I PIIM M +Q M P D Q Sbjct: 444 WLKDLSEPDPYM-------------------ILPIIMGGFMLLQSLMMRPKNVDTSQMTE 484 Query: 518 ---------MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 I+ W MP+ V PAGL++YW+ NV+SI+ Q + K + Sbjct: 485 QQKMQQSQMKIMTWGMPIFMVIIFRGMPAGLVLYWTAFNVLSILHQYFLTKHLKKKEN 542 >gi|260592831|ref|ZP_05858289.1| inner membrane protein OxaA [Prevotella veroralis F0319] gi|260535201|gb|EEX17818.1| inner membrane protein OxaA [Prevotella veroralis F0319] Length = 641 Score = 202 bits (512), Expect = 2e-49, Method: Composition-based stats. Identities = 101/617 (16%), Positives = 229/617 (37%), Gaps = 52/617 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER---------------KNIQTVKQ 45 M+ L ++++ + + + + ++ + +Q K Sbjct: 1 MD--KKTITGFILIALVLFGFAWWQQPSKEQLEQQQKEARLDSIAAAKKAQSQQLQAAKL 58 Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------L 99 Q + + + + LKN + +++ KG ++ Y Sbjct: 59 AQQKAQAATDTTALFHSALNGKAQDITLKNGKVELTLSTKGGVVRKAVIKNYVGHDIDVK 118 Query: 100 DVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 D S + +TL S ++ + A+ + T + P++ T + + Sbjct: 119 DGSKDQKDLTLFSGNDQNLNFMLSAKTSNIETKDLYFTPSNVTDSTVTLTADAGQGKTLT 178 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 L + + L ++ + + + + R + R + + AT T+ Sbjct: 179 LNYTLGKDYLLHMSLQAEGMSGMFAPNYNQMDINWEDRCRQQERGFMFENRYATLTYKKH 238 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 +G Y E W+ ++++++V I + +Q K Sbjct: 239 DGST-----------DYLSETSEKEETTEEPMDWVAFKNQFFSAVMIAKDNFATGAQLKS 287 Query: 278 LSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEM 332 K A + P + + G +F + EK+ + + Sbjct: 288 TPLEKGTKYLKQYAANMKAGFDPTGKKASEFEFYFGPNDFRLLQSVEKESRFGKDLDMQR 347 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 L+ GW F + + F L V G+ ++L T+ +KL+ +P+ KK Y+S+A M+ Sbjct: 348 LVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITYPMVKKSYMSSAKMR 407 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++PK+DE ++F + Q+ ++ + Y + ++PL+GC P+L+Q+P++ A++ + Sbjct: 408 VLKPKLDEATKQFNKPEDQMQKQQAMMQKYAEYGVSPLSGCLPMLIQMPIWIAMFNFVPN 467 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMKM 507 ++++R + W+KDL+ DP + L + ++ S Q K Sbjct: 468 AIQLRGES-FLWMKDLSTYDPILSWNSDLWLIGDHLSLTCILFCGANLLYSWFTMQQQKD 526 Query: 508 SPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q ++ + MP+ F F +++ +GL Y+ S S + + + Sbjct: 527 QMVGQQADQMKMMQYMMFAMPLFFFFMFNNYSSGLNFYYFVSLFFSAAIMWTL-RKTTND 585 Query: 564 IGLIDRLRSTFSKNYNS 580 L+ L + + N+ Sbjct: 586 EKLLAILEAHRKEAKNN 602 >gi|91228357|ref|ZP_01262285.1| putative inner membrane protein translocase component YidC [Vibrio alginolyticus 12G01] gi|91188117|gb|EAS74421.1| putative inner membrane protein translocase component YidC [Vibrio alginolyticus 12G01] Length = 227 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 94/237 (39%), Positives = 146/237 (61%), Gaps = 21/237 (8%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P ++++D+GW +FIAKP+ ML+S+ + VGN+G+AI+ T V+ +PL K QY S A Sbjct: 6 PNLDLVVDYGWLWFIAKPLHMLLSFIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMA 65 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+ +QPK+ +RE+ Q + + M++LYK +NPL GC P++LQ+P+F A+Y + Sbjct: 66 KMRMLQPKLQAMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWAL 124 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+E+RH+PF+GWI DL+A DP I P++M SMF+ KM Sbjct: 125 MESVELRHSPFFGWIHDLSAQDPYY-------------------ILPLLMGASMFLIQKM 165 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 SP D Q I+ +MPV+F F FP+GL++YW SN+++++QQ +I K + Sbjct: 166 SPTTVTDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYKGLEKK 222 >gi|282879438|ref|ZP_06288176.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella buccalis ATCC 35310] gi|281298436|gb|EFA90867.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella buccalis ATCC 35310] Length = 631 Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats. Identities = 99/612 (16%), Positives = 230/612 (37%), Gaps = 48/612 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPR----------------IEEMNNERKNIQTVK 44 M+ N + L +++ + + ++ +KN + Sbjct: 1 MD--KNTITGLVLMGLLLIGFSWWSQPSSEQKAEMMRQDSIAAVMKQKAETNKKNAELKH 58 Query: 45 QPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A + + L+N L ++N KG ++G+ Sbjct: 59 LAELKAKQEADTTALFHKALQGEAQDIVLQNEKLQLTLNTKGGTVTKAVIKGFEDR--EG 116 Query: 105 SPIVTLLSPSNTKNAYFAELD--YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 + VTLL + + ++T + P++ T + + L +K Sbjct: 117 NKDVTLLDEKVHQLNFTLSTKDTNIATQDLFFQPSAQTDSTVTLTANAGQGKSMVLTYKL 176 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 N L ++ ++ DT N + + + + + + +T T+ ++G Sbjct: 177 GPNYLLHMSMQVNGMNGLFAPDTKVMNVNWKDKCRQQEKGFTFENRYSTLTYHEEDGG-- 234 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 K S+ + + W+ ++++++V I + + + + Sbjct: 235 --------TDKLSETSEKVDEQIDKKIDWVAFKNQFFSAVMIAKHDFNTGALLTSIPQQK 286 Query: 283 ARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWG 337 K ++ P + + G +F ++ E+ + + L+ G Sbjct: 287 GSGFLKEYEAKLKTFFDPTGQTPSEFEFYFGPNDFRLLNRVEQQSTFNKDLELQRLVYLG 346 Query: 338 WFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W F + + F L G+ ++L T+ +K++ FP+ KK Y+S+A M+ ++PK Sbjct: 347 WPLFRIINRWFTIYVFDWLSKWFPMGVVLILITLLLKVITFPMVKKSYMSSAKMRVLKPK 406 Query: 396 IDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 ++ ++ + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + ++++R Sbjct: 407 LEAATAQYNKPEDQMQKQQAMMAEYSKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQLR 466 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKMSPPPA 512 + WI DL+ DP + L + + ++ S Q + Sbjct: 467 GES-FLWINDLSTYDPVIEWNRNIWLIGDHLSLTCILFCVANVLYSWMTMRQQRDQMVGQ 525 Query: 513 DKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 Q ++ W MPV+F F + + +GL Y+ S S + + + L+ Sbjct: 526 QAEQMKMMQWMMYLMPVMFFFMFNDYSSGLNFYYFVSLFFSAAIMWTL-RKTTNDEKLLK 584 Query: 569 RLRSTFSKNYNS 580 L + + +N + Sbjct: 585 ILEARYEENKAN 596 >gi|332827257|gb|EGK00027.1| hypothetical protein HMPREF9455_03616 [Dysgonomonas gadei ATCC BAA-286] Length = 646 Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats. Identities = 106/634 (16%), Positives = 235/634 (37%), Gaps = 73/634 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIE----------------------------- 31 M+ N + L ++ + E Sbjct: 1 MD--KNTIIGFVLIAAVIIGFTLLSRPSAEELAKQKEQYRRDSIEYAQTKEREKELNNLK 58 Query: 32 ----EMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGA 87 E+ NE P Q +S AV+ + + + L+N L + KG Sbjct: 59 DTAAEVKNENPVDDFFAAPVQEADSVLAVMDSVQMGSQQAEQLITLENSKLKVVFSTKGG 118 Query: 88 QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147 + L+ Y + + L + AE T ++ ++N + Sbjct: 119 KMVSAQLKEYSR---YDGDSLYLFNND-------AEFSLQLTNKQNKVLHTNNLIFTPIK 168 Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHY-LFKIVDTVTNNSIDQIRFSPRGRIMRHK 206 + ++ + ++ F ++ D++ + + +D+ + K Sbjct: 169 AEGDNSLIMRFSYAANQHVDFIYKLAEDDYMLKYDVNLVGLQPMLDRNKSDVIELYWAQK 228 Query: 207 PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPS 266 + + ++ + + + K +KS E W+ ++++A + I Sbjct: 229 MRRQEKSVKNEQRYSHIYYKYIGGDVKELSSDKSEQLEVKEPAKWIAFKNQFFAPILIAD 288 Query: 267 KETSF------HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 ++ S+ +A A + +I+ + G F + Sbjct: 289 EKIETALLDSKVLVTDENSEYLKTVEATIYAPATVDMNAGTISAGFTYYLGPMSFTLLKG 348 Query: 321 YE-------KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 Y+ K L + + L + + + + + + GI I+L T+ VKL Sbjct: 349 YDSHIDDVNKQLDLDKLVPLGWTLFRWVNQYFVIPIFNLLRGTGMSMGIVILLLTIIVKL 408 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWP 432 + PL K ++S+A M+ ++P+++EL K+ + Q+A + LY +NP++GC P Sbjct: 409 VISPLTFKSFMSSAKMRVLRPQVEELAAKYPKQEQAMEKQQATMALYNKAGVNPMSGCIP 468 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +LLQ+P+ A++ ++E+R + W DL+ D I +P H+ + Sbjct: 469 LLLQMPILIALFSFFPNAIELRGQS-FLWATDLSTYD--AIIEWKNHIPLIGT---HISL 522 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAM------ILNWMPVVFVFALSSFPAGLIIYWSWSN 546 + I+M+++ I K + + GQ ++ MP++F+F L+ +P+GL Y+ S Sbjct: 523 FCILMTVTNIIYTKFNMEMTNTGQQQMPGMKWMMYLMPLIFLFMLNDYPSGLTYYYFLSL 582 Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 +++I+ + + E ++ +L + +K Sbjct: 583 LVTILLT-IGFRYIIDEDKVLAKLEANKAKPKKK 615 >gi|212550525|ref|YP_002308842.1| inner membrane protein translocase component YidC [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|254772747|sp|B6YQF9|OXAA_AZOPC RecName: Full=Inner membrane protein oxaA gi|212548763|dbj|BAG83431.1| preprotein translocase YidC subunit [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 612 Score = 200 bits (508), Expect = 6e-49, Method: Composition-based stats. Identities = 115/595 (19%), Positives = 239/595 (40%), Gaps = 39/595 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + L +++ + I+E + + + N + + D Sbjct: 1 MD--KNTIIGFILIFWVLFGFAYLNHNRPIQEQLEKNPPMSANSVKKEFSNPISEIQSSD 58 Query: 61 -----RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 A V ++N + ++ KG + + L+ Y N P+ + Sbjct: 59 IYGNFAASTKGTETFVTIQNALMEIKLSTKGGRIYSVRLKKY--TNYKNEPLYLFEGDES 116 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 N F NN L + + + ++S L +L I F T+ D Sbjct: 117 AFNIIFISS------NNKVLNSEDFYFEIVSNSELETIL--RLNAGKNRYIDFVYTLHPD 168 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++ + + + + K + +E + + + + Sbjct: 169 DYMVDWKLVSHNIQTELSHSMHTLNIQWMQKIRQQEKGRKFEERYARLTYKFLTDDIEQL 228 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 K + N W+G D++++SVFI ++ + Y ++S + Sbjct: 229 RETKDDVRNVPNKLKWIGYKDQFFSSVFIVHSNFE-SAKLDSKYLTYGAYIKEYSTSTSI 287 Query: 296 ILPGKSIT-TTNFLFAGAKEFPTIHHYEKDLAIPR---FEMLIDWGWFYFIAKPMFMLMS 351 +I + G ++ + Y+K + E L+ GW F A +++ Sbjct: 288 PYNIANIEPIKFNFYFGPNDYSLLKSYDKTKLKEQNLELEKLVPLGWSLFRAINKCLIIP 347 Query: 352 YFYNLVG----NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 F L N G+AI++ T+ +K+ FPL K ++S+A M+ ++P+++ + K+ Sbjct: 348 IFNWLTNGENVNLGLAILILTLIIKIALFPLTYKSFISSAKMRVLKPQVENINIKYSGQE 407 Query: 408 PQV-LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + Q+ ++LY+ +NP+ GC+PILLQ+P A++ ++ +RH + W DL+ Sbjct: 408 KALIRQQKTMELYRQVGVNPMTGCFPILLQMPFLIALFMFFPSAIGLRHQS-FLWANDLS 466 Query: 467 AADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSMFIQMKMSPPPAD-------KGQAM 518 D ++ +PF H+ ++ ++MSL+ + + + G + Sbjct: 467 TYDTLIQWSTD--IPFIPRFLGNHISLFCLLMSLATILNTRYNTMYQQNIGQEQFPGMKL 524 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + +MPVV F L+S+PAGL Y+ S +I+I+Q +I + E+ L+ +L + Sbjct: 525 TMYFMPVVMFFFLNSYPAGLNYYYLISTLITIMQT-IIFRGLVNELNLLAKLEAN 578 >gi|288800073|ref|ZP_06405532.1| inner membrane protein OxaA [Prevotella sp. oral taxon 299 str. F0039] gi|288333321|gb|EFC71800.1| inner membrane protein OxaA [Prevotella sp. oral taxon 299 str. F0039] Length = 632 Score = 199 bits (506), Expect = 9e-49, Method: Composition-based stats. Identities = 105/614 (17%), Positives = 241/614 (39%), Gaps = 50/614 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + +L ++ + + E R++ + Q N + L+ + Sbjct: 1 MD--KNNIIGFSLIAAVLIGFSVWNQPSSEERAEIARQDSIANVKKAQEKNLSSKTLLAN 58 Query: 61 RAQALS----------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN 104 A S + V LK+ L ++N KGA ++ ++G+ + Sbjct: 59 TATDSSLTNADTTSVLFNALKGTAQDVTLKSEKLTLTLNSKGAVVREVLIKGFKDR--NG 116 Query: 105 SPIVTLLSPSNTKNAYFAELD--YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 +P VTL + ++ Y + T P++ T + L T + + ++ Sbjct: 117 NPNVTLFNSNDQNLRYILSTKEENIDTKELYFQPSNVTDSTVTFTAQLQGTKKLVINYQL 176 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 +N L +I +T + + + Q + + + + + +T T+ +G Sbjct: 177 KHNYLLHTSIQAQGMNAIFAPNTNSMDIVWQDKCRQQEKGFTFENRYSTLTYHKADGGTD 236 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 L + S + W+ ++++++V I + ++ + Sbjct: 237 YLSESSEK----------VDEKIEDKLDWVAFKNQFFSAVMIAKDDFQSNTLLTSVPQEK 286 Query: 283 ARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF- 339 K ++ P T + G +F + + E +++ ++ + + Sbjct: 287 GSGYLKDYEAKLKTFFDPTGKKPTEFEFYYGPNDFRLLQNIEDNVSFIGKDLQMQRLVYL 346 Query: 340 ------YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + + ++ N GI ++L T+ +K L +PL KK Y+S+A M+ ++ Sbjct: 347 GWPLFRIINRWFTIYVFDFLTSMNMNMGIVLILITLLLKFLTYPLVKKSYMSSAKMRVLK 406 Query: 394 PKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 P+++E + + Q+ Q+AM+ Y + ++PL+GC P+L+Q+P++ A++ + +++ Sbjct: 407 PRLEEATKHLNGADNQMQKQQAMMSEYAKYGVSPLSGCLPMLIQMPIWIAMFNFVPNAIQ 466 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKMSPP 510 +R + WI DL+ DP + L + ++ S Q K Sbjct: 467 LRGES-FLWISDLSTYDPILEWHNNYWLIGDHLSLTCILFCAANLLYSWMTMKQQKDQMI 525 Query: 511 PADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 Q ++ +M P++F F + + AGL Y+ S S + I++ + L Sbjct: 526 GQQADQMKMMQYMMFVMPLMFFFMFNDYSAGLNFYYFMSLFFSALIMW-ILRKTTDDEKL 584 Query: 567 IDRLRSTFSKNYNS 580 + L + +N ++ Sbjct: 585 LSILDKKYKENKDN 598 >gi|90581132|ref|ZP_01236931.1| putative inner membrane protein translocase component YidC [Vibrio angustum S14] gi|90437653|gb|EAS62845.1| putative inner membrane protein translocase component YidC [Vibrio angustum S14] Length = 230 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 90/227 (39%), Positives = 141/227 (62%), Gaps = 21/227 (9%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 D+GW FIA P+ L+++ + +VGN+G+AI++ T+ V+ L +PL K QY S A M+ +Q Sbjct: 11 PDYGWSSFIASPLHELLAFIHGIVGNWGVAIIILTLIVRGLMYPLTKAQYTSMAKMRMLQ 70 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PKI +RE+ Q + M++LYK +NPL GC P+L+Q+P+F A+Y V+++S E+ Sbjct: 71 PKIQAMRERCGD-DRQRQSQEMMELYKKEKVNPLGGCLPLLIQMPIFIALYTVLNLSTEL 129 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-A 512 R+APF+GWI++L+A DP + PI+M +SMF K SP Sbjct: 130 RNAPFFGWIQNLSAQDPYY-------------------VLPILMGISMFFIQKNSPSTVT 170 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 D Q I+ +MPV+F FPAGL++YW SN+++++QQ +I + Sbjct: 171 DPMQQKIMTFMPVIFTVFFLYFPAGLVLYWLTSNIVTLIQQTIIFRK 217 >gi|257457349|ref|ZP_05622520.1| inner membrane protein OxaA [Treponema vincentii ATCC 35580] gi|257445271|gb|EEV20343.1| inner membrane protein OxaA [Treponema vincentii ATCC 35580] Length = 521 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 116/524 (22%), Positives = 223/524 (42%), Gaps = 26/524 (4%) Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + + V +K ++ +G L ++ V ++ +N Sbjct: 3 ETPDETVIGEQAVTVKTDIAEITLTNRGGDIISYKLLEHNNS--KGDSYVEMVKNLTDRN 60 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF---ERTISLD 175 F+ + A + + + ++ I + ++ + F +R L Sbjct: 61 RAFSIALGGAQAPALNQFFNVKEETVNGKHVVGFFKTISIKNQDGSVSSFTLAKRYTFLP 120 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV--EQK 233 + Y+F++ T++ ++ Q + + + + ++K Sbjct: 121 DDYMFELAVTISGDADMQGLNFDNAGYTLRTMPQIGPDWNAKADRYEYRNFFAYINGKKK 180 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 S ++ + +S W GIS KY++ + IPS + Q Sbjct: 181 DSALKANQTKVITDSVPWAGISGKYFSLIVIPSVPAQ-QILYSAAQPNADTVQDSQLFFS 239 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYE----KDLAIPRF---EMLIDWGWFYFIAKPM 346 ++ G +T ++ G + Y + + + G + + + Sbjct: 240 RPVITGNRVTDVYRIYLGPCSENILSTYNIPSKNNYNYDNLRIDTVAVSSGIWRPLEVLL 299 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 L+ +FY L+ N+G++I+L T+ +K++FFPL KK ST M+ +QPKI EL+ K+K Sbjct: 300 KWLLQFFYKLIPNWGVSIILVTILIKVIFFPLTKKSSESTQQMQKMQPKIQELQAKYKG- 358 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDL 465 PQ L + M +LYK NPL+GC P+L+Q+P+ FA+Y++ + E R A F WI DL Sbjct: 359 KPQKLNEEMAKLYKEAGYNPLSGCLPLLIQLPILFAMYRLFNNYFEFRGAMFIPHWIPDL 418 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA----MILN 521 + D +I +PF G+ + I PI+ +S + K++ P Q I+ Sbjct: 419 SVGD--SILQFPSPIPFL--GWTDLRILPIVYVISQMVFGKITQTPTSDQQQNNTMKIMM 474 Query: 522 W-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + MP+ F F + P+GL++YW+ +N + +VQQ +I M + Sbjct: 475 YGMPLFFFFMFYNAPSGLLLYWTCTNFLMLVQQMIIKAMMKKKE 518 >gi|325270361|ref|ZP_08136966.1| inner membrane protein OxaA [Prevotella multiformis DSM 16608] gi|324987305|gb|EGC19283.1| inner membrane protein OxaA [Prevotella multiformis DSM 16608] Length = 642 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 105/618 (16%), Positives = 228/618 (36%), Gaps = 54/618 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N L ++++ + + P E++ +R A + Sbjct: 1 MD--KNTIAGFVLIALVLFGFAWWQ-QPSAEQVAQQRAEFVKDSVAAARKAQNAKLAAAK 57 Query: 61 R----------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------ 98 + + + LKN + ++N KG +R Y Sbjct: 58 QAQQKAAAAADTTALFHSALNGKGQDITLKNSKVELTLNTKGGVVSKAVIRNYVGHDIAV 117 Query: 99 LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 D S + VTL S ++ + + + T + + +P++ T + + P + Sbjct: 118 KDGSKDRKDVTLFSGNDQSLNFMLAGKNTNIETKDLVFIPSNVTDTTVTLTAVAGPGRTL 177 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + + L ++ + D + Q R + R + + AT T+ Sbjct: 178 TLNYVLGRDYLLHASLQAEGMSGLFAPDCNQMDVSWQERCRQQERGFTFENRYATLTYRK 237 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G Y ++ W+ ++++++V I + ++ K Sbjct: 238 HGGST-----------DYLSETAEKEETTEDAMDWVAFKNQFFSAVMIARDNFAAGAKLK 286 Query: 277 YLSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FE 331 + K + P + + G +F + EK+ + + Sbjct: 287 STPLDKESHYLKHYEASMKTGFDPTGRRPSEFEFYFGPNDFRLLQSVEKESRFGKDLDMQ 346 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 L+ GW F + + F L V G+ ++L T+ +KL+ +P+ KK Y+S+A M Sbjct: 347 RLVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITYPMVKKSYMSSAKM 406 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 + ++PK+DE +F + Q+ ++ + Y + ++PL+GC P+L+Q+P++ A++ + Sbjct: 407 RVLKPKLDEATRQFNKPEDQMQKQQAMMQKYAEYGVSPLSGCLPMLIQMPIWIAMFNFVP 466 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMK 506 ++++R + W+ DL+ DP + L + ++ S Q K Sbjct: 467 NAIQLRGQS-FLWMDDLSTYDPIISWGHNLWLVGDHLSLTCILFCGANLLYSWFTMQQQK 525 Query: 507 MSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 Q ++ W MP+ F F + + +GL Y+ S S + + Sbjct: 526 DQMVGQQADQMKMMQWMMFAMPLFFFFMFNDYSSGLNFYYFVSLFFSAAIMWTL-RKTTD 584 Query: 563 EIGLIDRLRSTFSKNYNS 580 + L+ L + + N+ Sbjct: 585 DEKLLRILEAKRKEKKNN 602 >gi|325857446|ref|ZP_08172501.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola CRIS 18C-A] gi|325483156|gb|EGC86136.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola CRIS 18C-A] Length = 642 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 105/618 (16%), Positives = 227/618 (36%), Gaps = 54/618 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N L ++++ + + P E++ +R A + Sbjct: 1 MD--KNTITGFVLIALVLFGFAWWQ-QPSAEQVAQQRAEFVKDSVAAARKAQNAKIAAAK 57 Query: 61 R----------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------ 98 + + + LKN + ++N KG ++ Y Sbjct: 58 QAQQKAAVAADTTALFHSALNGKGQDITLKNSKVELTLNTKGGVVSKAVIKNYVGHDIAV 117 Query: 99 LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 D S + VTL S ++ + + + T + + P++ T + + P + Sbjct: 118 KDGSKDRKDVTLFSGNDQSLNFMLAGKNTNIETKDLVFTPSNVTDTTVTLTAVAGPGKTL 177 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + + L ++ + D + Q R + R + + AT T+ Sbjct: 178 TLNYVLGKDYLLHASLQAEGMSGLFAPDCNQMDVSWQERCRQQERGFTFENRYATLTYKK 237 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G Y ++ W+ ++++++V I S ++ K Sbjct: 238 HGGST-----------DYLSETAEKEETTEDAMDWVAFKNQFFSAVMIARDNFSAGAKLK 286 Query: 277 YLSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FE 331 + K + P + + G +F + EK+ + + Sbjct: 287 STPLDKESHYLKHYEASMKTGFDPTGRRPSEFEFYFGPNDFRLLQAVEKESRFGKDLDMQ 346 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 L+ GW F + + F L V G+ ++L T+ +KL+ +P+ KK Y+S+A M Sbjct: 347 RLVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITYPMVKKSYMSSAKM 406 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 + ++PK+DE +F + Q+ ++ + Y + ++PL+GC P+L+Q+P++ A++ + Sbjct: 407 RVLKPKLDEATRQFNKPEDQMQKQQAMMQKYAEYGVSPLSGCLPMLIQMPIWIAMFNFVP 466 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMK 506 ++++R + W+ DL+ DP + L + ++ S Q K Sbjct: 467 NAIQLRGQS-FLWMDDLSTYDPIISWGHNLWLVGDHLSLTCILFCGANLLYSWFTMQQQK 525 Query: 507 MSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 Q ++ W MP+ F F + + +GL Y+ S S + + Sbjct: 526 DQMVGQQADQMKMMQWMMFAMPLFFFFMFNDYSSGLNFYYFVSLFFSAAIMWTL-RKTTN 584 Query: 563 EIGLIDRLRSTFSKNYNS 580 + L+ L + + N+ Sbjct: 585 DEKLLQILEAKRKEKKNN 602 >gi|327314137|ref|YP_004329574.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola F0289] gi|326944441|gb|AEA20326.1| membrane protein insertase, YidC/Oxa1 family [Prevotella denticola F0289] Length = 642 Score = 198 bits (502), Expect = 3e-48, Method: Composition-based stats. Identities = 104/618 (16%), Positives = 226/618 (36%), Gaps = 54/618 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N L ++++ + + P E++ +R A + Sbjct: 1 MD--KNTITGFVLIALVLFGFAWWQ-QPSAEQVAQQRAEFVKDSVAAARKAQNAKLAAAK 57 Query: 61 R----------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------ 98 + + + LKN + ++N KG ++ Y Sbjct: 58 QAQQKAAVAADTTALFHSALNGKGQDITLKNSKVELTLNTKGGVVSKAVIKNYVGHDMAV 117 Query: 99 LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 D S + VTL S ++ + + + T + + P++ T + + P + Sbjct: 118 KDGSKDRKDVTLFSGNDQSLNFMLAGKNTNIETKDLVFTPSNVTDTTVTLTAVAGPGKTL 177 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + + L ++ + D + Q R + R + + AT T+ Sbjct: 178 TLNYVLGKDYLLHASLQAEGMSGLFAPDCNQMDVSWQERCRQQERGFTFENRYATLTYKK 237 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 G Y ++ W+ ++++++V I + ++ K Sbjct: 238 HGGST-----------DYLSETAEKEETTEDAMDWVAFKNQFFSAVMIARDNFAAGAKLK 286 Query: 277 YLSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FE 331 + K + P + + G +F + EK+ + + Sbjct: 287 STPLDKESHYLKHYEASMKTGFDPTGRHPSEFEFYFGPNDFRLLQAVEKESRFGKDLDMQ 346 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 L+ GW F + + F L V G+ ++L T+ +KL+ +P+ KK Y+S+A M Sbjct: 347 RLVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITYPMVKKSYMSSAKM 406 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 + ++PK+DE +F + Q+ ++ + Y + ++PL+GC P+L+Q+P++ A++ + Sbjct: 407 RVLKPKLDEATRQFNKPEDQMQKQQAMMQKYAEYGVSPLSGCLPMLIQMPIWIAMFNFVP 466 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMK 506 ++++R + W+ DL+ DP + L + ++ S Q K Sbjct: 467 NAIQLRGQS-FLWMDDLSTYDPIISWGHNLWLVGDHLSLTCILFCGANLLYSWFTMQQQK 525 Query: 507 MSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 Q ++ W MP+ F F + + +GL Y+ S S + + Sbjct: 526 DQMVGQQADQMKMMQWMMFAMPLFFFFMFNDYSSGLNFYYFVSLFFSAAIMWTL-RKTTN 584 Query: 563 EIGLIDRLRSTFSKNYNS 580 + L+ L + N+ Sbjct: 585 DEKLLQILEEKRKEKKNN 602 >gi|119953231|ref|YP_945440.1| putative inner membrane protein translocase component YidC [Borrelia turicatae 91E135] gi|254772754|sp|A1QZM8|OXAA_BORT9 RecName: Full=Inner membrane protein oxaA gi|119862002|gb|AAX17770.1| 60 kDa inner membrane protein YidC [Borrelia turicatae 91E135] Length = 545 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 119/571 (20%), Positives = 229/571 (40%), Gaps = 51/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M ++ AI LS+ + + F+ M E D + ++ Sbjct: 1 MSQSKRILRAIYLSLFFIGIFMLVDDVFFSRKSPSVMEREI----GFNLDRDFDVEHHSI 56 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 +D + S + ++ + + G L L+ + ++ ++ + Sbjct: 57 DENDTLSLSANSKEIGVETGIYYATFSTFGGNLVSLKLKDH---LNLERNPTEMVKVNMD 113 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 + F T + +++ T K + + +R + Sbjct: 114 REGLFYITFDNLTKS---------LFSYDKINDYTHEFKTKFEYNDKYYEYIKRYTFSSK 164 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 ++ NN F + G + S + Sbjct: 165 DEYLIKLEIFLNNVDANDNFDIDFYKFVLSSDIEN---LSERGKLQYNNYLSQSIYYDTK 221 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + W+G S KY+ + + + + +FK + + + Sbjct: 222 LRYGKDGLSVIKPKWVGSSTKYFEVLV---SKENMNVEFKQENKVLKTFVLNKIGD---- 274 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDL------AIPRFEMLIDWGWFYFIAKPMFMLM 350 S + T +++AG ++ + + ++ + F M ++ YFI PM ++M Sbjct: 275 ---TSFSDTFYIYAGPRDNGYLDIFNENNLNSFGLSNVEFGMSVEKSLLYFIQVPMQLIM 331 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ E++ KFK P+ Sbjct: 332 QIFYDVIPNWGLSIIFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKN-DPKR 390 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469 L + M +LY+ +NPL GC PILLQ+PVFFA+Y +++ +R A F GWI DL+ D Sbjct: 391 LNEEMGKLYREEGVNPLGGCLPILLQLPVFFALYGLVNNFFLLRGASFIPGWIDDLSIGD 450 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525 F + + + + I P IM ++ + +S + K Q L + MP+ Sbjct: 451 SIYYFG------YKVFVWTDIRILPFIMMITQLLSTIISSNVSFKNLGSQQKFLYFGMPI 504 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F F L P+GL+IYW +N+ +I+QQ I Sbjct: 505 MFFFILYDMPSGLLIYWITTNIFTILQQYYI 535 >gi|187918308|ref|YP_001883871.1| putative inner membrane protein translocase component YidC [Borrelia hermsii DAH] gi|254772751|sp|B2S0E5|OXAA_BORHD RecName: Full=Inner membrane protein oxaA gi|119861156|gb|AAX16951.1| 60 kDa inner membrane protein YidC [Borrelia hermsii DAH] Length = 545 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 122/567 (21%), Positives = 229/567 (40%), Gaps = 43/567 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M ++ AI LS+ + + + + D +++ D Sbjct: 1 MSQSKRILRAIYLSLFFIGIFMIIDDIFFSHKSPSVMDKEIGFNLDKDFDIDNSSIDEDY 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + S ++++ + + L L+ + + +V + + + Sbjct: 61 ALNLSANSKDIDVETGIYYATFSTFRGDLISLKLKDHLNLEKEPTEMVKVNMDRES--LF 118 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 + LD ++ +++ T + +R ++ Sbjct: 119 YVTLDNLTRD----------LFSYDRVDDYTHDFKTNFEYNGKFYEYIKRYTFSNKGEYL 168 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 ++ NN + G + S + + Sbjct: 169 IKLEIFLNNIDANDNSDIDSYKFVLSSDIEK---LSERGKLQYNNYLSQAVYFDTKLRYG 225 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 S W+G KY+ + + + + +FK S + K Sbjct: 226 KDGLSVISPKWVGSGTKYFEVLV---SKENMNVEFKQESKILKAFILNKVG-------NK 275 Query: 301 SITTTNFLFAGAKEFPTIHHYEKDL------AIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 +I+ T +++AG K+ + + K+ + F M ++ YFI PM ++M FY Sbjct: 276 NISDTFYIYAGPKDNGYLDLFNKEDLNSFGLSNVEFGMSVEKSLLYFIQVPMQLIMQIFY 335 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 N++ N+G++IM T+ V++L FPL K + +TA + +QPK+ E++ KFK P+ L + Sbjct: 336 NVIPNWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKFKN-DPKRLNEE 394 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNI 473 M +LY+ +NPL GC+PILLQ+PVFFA+Y +++ +R A F GWI DL+ D Sbjct: 395 MGKLYREEGVNPLGGCFPILLQLPVFFALYGLVNNFFLLRGASFIPGWIDDLSIGDSIYY 454 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW-MPVVFVF 529 F + + + + I P IM ++ I +S + K Q IL + MP++F F Sbjct: 455 FG------YKVFMWTDIRILPFIMMVTQLISTIISSNVSFKSLGSQQKILYFGMPIMFFF 508 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 L P+GL+IYW +N+ +I+QQ I Sbjct: 509 ILYDMPSGLLIYWITTNIFTILQQYYI 535 >gi|325103807|ref|YP_004273461.1| membrane protein insertase, YidC/Oxa1 family [Pedobacter saltans DSM 12145] gi|324972655|gb|ADY51639.1| membrane protein insertase, YidC/Oxa1 family [Pedobacter saltans DSM 12145] Length = 590 Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats. Identities = 101/582 (17%), Positives = 222/582 (38%), Gaps = 35/582 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQ---VDNSYAAVL 57 M+ N F + L +II+ F + P EE+ E+ ++ + V N + V Sbjct: 1 MD--KNTFTGLFLILIILVG-STFLLKPNEEEIKREQFVQDSLAKVKSGVPVTNEHKNVT 57 Query: 58 IDDRAQALSMSPRV---ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPS 114 + D + V L+N + +++ G Q ++ + + V L + S Sbjct: 58 LKDSVFVDNSKQEVISSVLENDKIKLNLSNLGGQIISSVVK---TETTYRGEPVVLFNKS 114 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK-NANNILFERTIS 173 + + + V+T + L + I ++ + + IS Sbjct: 115 DFGLEFVSNGKNVNTNQLYFTRVDSVPNKLTYRYADADGSYIDFIYSLPEGSNKVDFNIS 174 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 L + + + + + + V S + Sbjct: 175 LKGYSQKI-----------PGSTTDLNLVWQTNLLQQEKDLKSERNYSTVYYKTSAGDVD 223 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 Y +++ + E W+ ++++ I S + + + + Sbjct: 224 YLSETETAEKDVQEKIEWVSFKQHFFSAAIISKDGFSKGHTKVETTSSNDFVKRYSTKLS 283 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + P + + G +F + ++ + + + + + ++F Sbjct: 284 LPYKPSDVNSYDLTYYFGTNKFSELKDQ--GFSLEKQVKMGWGPLKWINRYLVLPIFNFF 341 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + ++G+ I+L TV +K FP K Y+S A M+ ++P++DE++ K + +LQ+ Sbjct: 342 NSFALSYGLIILLLTVILKGALFPFTYKSYLSMAKMRVLKPEMDEIKAKVGEDNQALLQQ 401 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 ++LYK +NPL GC P+L Q+P A + E+RH + W+ DL+ D Sbjct: 402 EYLKLYKQAGVNPLGGCLPMLFQMPFILAFFYFFPNLFELRHES-FLWMTDLSTYDDIIK 460 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-KGQAM-ILNWMPVVFVFAL 531 F +L + H+ + ++M+ S I + ++ +GQ I P++F L Sbjct: 461 FPTIPLLGWD-----HISLMCLLMTTSTLIYTYYNNQTSNVQGQMKYIGYITPLIFFGVL 515 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +S+P+GL Y+ +N+++ QQ I + + + +++ Sbjct: 516 NSYPSGLNYYYFCANILTFAQQFFI-RRFVDDDKIHAQIQEN 556 >gi|288802342|ref|ZP_06407782.1| inner membrane protein OxaA [Prevotella melaninogenica D18] gi|288335309|gb|EFC73744.1| inner membrane protein OxaA [Prevotella melaninogenica D18] Length = 643 Score = 197 bits (500), Expect = 5e-48, Method: Composition-based stats. Identities = 101/617 (16%), Positives = 224/617 (36%), Gaps = 52/617 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ L +I++ + + + + ++ + + Sbjct: 1 MD--KRTITGFVLIALILFGFAWWQQPSAEQVAQQRAEFVKDSIAAAKKTQTAKLAAEKQ 58 Query: 61 R---------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY------HL 99 + + + LKN + +++ KG ++ Y Sbjct: 59 AQQKAAQATDTTALFYSALSGKAQDITLKNSKVELTLSTKGGVVKKAVIKNYIGHNIAVK 118 Query: 100 DVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 D S + VTL S + + A+ + T + I P++ T + + + Sbjct: 119 DGSQDQKNVTLFSGDDQSLNFMLAAKNSNIETKDLIFTPSNVTDSTVTFTAVAGKGKTLT 178 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 L + + L ++ + + + Q R + R + + AT T+ Sbjct: 179 LSYTLGKDYLLNMSLQAEGMGGLFAPNYNQLDINWQDRCRQQERGFTFENRYATLTYKKH 238 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 +G Y E W+ ++++++V I + ++ K Sbjct: 239 DGGT-----------NYLSETSEKEETTEEPMDWVAFKNQFFSAVMIAKDNFATGAKLKS 287 Query: 278 LSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEM 332 + + K + P + + G +F + E + + E Sbjct: 288 TPLEKSSHYLKHYEANMKAGFDPTGKRPSEFEFYFGPNDFRLLQSVETESKFAKELDMER 347 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 L+ GW F + + F L V G+ ++L T+ +KL+ FP+ KK Y+S+A M+ Sbjct: 348 LVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITFPMVKKSYMSSAKMR 407 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++PK+DE ++F + Q+ ++ + Y + ++PL+GC P+L+Q+P++ A++ + Sbjct: 408 VLKPKLDEATKQFNKPEDQMQKQQAMMQKYSEYGVSPLSGCLPMLIQMPIWIAMFNFVPN 467 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMKM 507 ++++R + W+ DL+ DP + L + ++ + Q K Sbjct: 468 AIQLRGQS-FLWMHDLSTFDPIFSWNHDVWLVGDHISLTCILFCGANLLYTWFTMQQQKD 526 Query: 508 SPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q ++ W MP+ F F + + +GL Y+ S S + + E Sbjct: 527 QMVGQQADQMKMMQWMMFGMPLFFFFMFNDYSSGLNFYYFISLFFSAAIMWAL-RKTTNE 585 Query: 564 IGLIDRLRSTFSKNYNS 580 L+ L + + N+ Sbjct: 586 EKLLAILEARREERKNN 602 >gi|282858704|ref|ZP_06267858.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella bivia JCVIHMP010] gi|282588508|gb|EFB93659.1| membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein [Prevotella bivia JCVIHMP010] Length = 641 Score = 197 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 102/609 (16%), Positives = 222/609 (36%), Gaps = 50/609 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK-NIQTVKQPNQVDNSYAAVLID 59 M+ N L ++++ + + + + ++ ++ +V N A L Sbjct: 1 MD--KNTITGFVLMALVLFGFAWWQQPSKEQLAQQRKQFVADSIAAAKKVQNEKMASLKA 58 Query: 60 DRAQALS--------------MSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------L 99 ++A+ + + + LKN + ++N KG + Y Sbjct: 59 EQAKQAAIADTTTLFYTALNGQAQDIVLKNDKVALTLNTKGGVVRKAIINNYVGHNIAVK 118 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV 159 D S + VTL + L++ A + + + + + + L Sbjct: 119 DGSKDQKYVTLFDGKD------QSLNFALAAKQSNIETKDLYFTPSN----QTDSTVTLT 168 Query: 160 FKNANNILFERTISLDEHYLFKIV-DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQE 218 T +L + YL + + + K + F + Sbjct: 169 ANAGQGKALILTYTLGKDYLLHLSVQAQGMEGLFNPTNNQLEVEWADKVRQQERGFSFEN 228 Query: 219 GFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + + K+ Y + E+ W+ ++++++V I S ++ K + Sbjct: 229 RYATLTYKKTEGSTDYLNESSEKEQITEEATDWVAFKNQFFSAVMISKDNFSTGAKLKSV 288 Query: 279 SDGHARYQAKFSANEI--TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FEML 333 K + P + F G +F + E + + L Sbjct: 289 PQDKNSGYLKQYEANLKTNFDPSGKKPSEFEFFFGPNDFRLLQAIESQSTFGKDLEMQRL 348 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--FPLAKKQYVSTANMKN 391 + GW F + + F L F + I+L + + L +P+ KK Y+S+A M+ Sbjct: 349 VYLGWPLFRIINRWFTIYVFDWLSKLFPMGIVLILITLLLKALTYPMVKKSYMSSAKMRV 408 Query: 392 IQPKIDELREKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++PK+DE +++ + Q Q+AM+Q+Y + ++PL+GC P+L+Q+P++ A++ + + Sbjct: 409 LKPKLDEATKQYNKPEDQMKKQQAMMQMYSEYGVSPLSGCLPMLIQMPIWIAMFNFVPNA 468 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKMS 508 +++R + W+KDL+ DP + + + ++ S Q K Sbjct: 469 IQLRGES-FLWMKDLSTFDPIFEWNHSLWMIGDHISLTCILFCAANLLYSWFTMQQQKDQ 527 Query: 509 PPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + Q ++ + MP+ F F + + +GL Y+ S S + + E Sbjct: 528 MVGSQGDQMKMMQYMMLGMPLFFFFVFNDYSSGLNFYYFVSLFFSAAIMWGL-RKTTNEE 586 Query: 565 GLIDRLRST 573 L+ L Sbjct: 587 KLLAYLEER 595 >gi|149197354|ref|ZP_01874405.1| hypothetical protein LNTAR_00195 [Lentisphaera araneosa HTCC2155] gi|149139372|gb|EDM27774.1| hypothetical protein LNTAR_00195 [Lentisphaera araneosa HTCC2155] Length = 614 Score = 196 bits (498), Expect = 8e-48, Method: Composition-based stats. Identities = 111/606 (18%), Positives = 239/606 (39%), Gaps = 68/606 (11%) Query: 8 FVAIALSVIIVY------AWQNFY-VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 + + LS+ ++ Q F+ + P+ E + ++ I + Sbjct: 9 LIILGLSLYLILNTENDKINQKFFGIEPQAAAPVEENTDTALSSDVVSPTSTTNEKTIAE 68 Query: 61 RAQALSMSPR-----------VELKNPSLIGSINLK---GAQFDDLNLRGYHLDVSSNSP 106 Q ++ + + L S+ + L G D L Y + + Sbjct: 69 PKQEIAKTEIKEELPKELNTELPLHTLSVGENFTLNIRPGQGLKDAQLNEYFTTSAKDQN 128 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 + + + + + ++ +++ + + + ++ ++ + Sbjct: 129 VKIGDKNTPSFSLSGVAEKWELIDLRVKEKSNDKLITEAAYTFEGQSFAVQSTWELEEDY 188 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 F L + + + I+ G Q N + Sbjct: 189 HFALNHKLINTSDKTLNVSGLYLNCGYIQPIQMGEHGFFTQQAIGNDQAIDTILKKERKI 248 Query: 227 KSLVEQKYSDIEKSSIS--------------------NFHESNSWLGISDKYW------- 259 ++ ++ + + + ++S W+ + ++Y+ Sbjct: 249 ETHIKTSIDGDIQDKVEEAQDQGRVLKDPFMVYSPDPDDNDSYDWIAVKNQYFAFIADTT 308 Query: 260 -ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL---PGKSITTTNFLFAGAKEF 315 + + +K S K +Y F+ +I+ PG S ++AG +E Sbjct: 309 DSFATVRTKTKEIISPTKNEDGSQDKYDLLFAEGQISDFDLAPGASKEIVLDIYAGPQEI 368 Query: 316 PTIHHYEKDL-AIPRFEMLIDW--GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 + + D I + M ++ W F+++ + + +F V +FG+AI+L T+ VK Sbjct: 369 HVLENLGNDKKGIMQLNMFMNMKVSWLGFLSEMILKALFFFNGFVNSFGLAIILLTISVK 428 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 LLF+ L K S M + P+I E+RE+ K +P QV+ + ++ LY+ +NP GC P Sbjct: 429 LLFWRLTNKSNKSMKKMAVLGPRIKEIREENKDNP-QVMNQKVMALYREEGVNPAGGCLP 487 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +LLQ+P+F A++ + ++E+RH + WI DL+ D G +P + + Sbjct: 488 MLLQMPIFIALFNALRSAIELRHV-EFLWITDLSQPDT------LGFIPG-----VPIRP 535 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 II +L M +Q KM+P AD+ Q ++ +MP++ +F PAGL +YW + ++++++Q Sbjct: 536 LVIIWALLMLVQQKMTPSSADETQKKVMMFMPIMMLFFCYGMPAGLTLYWCFQSLMTLIQ 595 Query: 553 QAVIMK 558 + + Sbjct: 596 YKLNNR 601 >gi|302346738|ref|YP_003815036.1| membrane protein insertase, YidC/Oxa1 family [Prevotella melaninogenica ATCC 25845] gi|302150409|gb|ADK96670.1| membrane protein insertase, YidC/Oxa1 family [Prevotella melaninogenica ATCC 25845] Length = 643 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 106/618 (17%), Positives = 231/618 (37%), Gaps = 54/618 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ L +I++ + + P E++ +R + A + + Sbjct: 1 MD--KRTITGFVLIALILFGFAWWQ-QPSAEQVAQQRAEFVKDSIASAKKAQTAKLAAEK 57 Query: 61 R----------------AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY------H 98 + A + + LKN + +++ KG ++ Y Sbjct: 58 QAQQKAAQATDTTALFYAALNGKAQDIILKNSKVELTLSTKGGVVKKAVIKNYIGHNIAV 117 Query: 99 LDVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 D S + VTL S + + A+ + T + I P++ T + + + Sbjct: 118 KDGSQDQKNVTLFSGDDQSLNFMLAAKNSNIETKDLIFTPSNVTDSTVTLTAVAGEGKTL 177 Query: 157 KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGV 216 L + + L ++ + + + Q R + R + + AT T+ Sbjct: 178 TLNYTLGKDYLLNMSLQAEGMGGLFAPNYNQIDINWQERCKQQERGFTFENRYATLTYKK 237 Query: 217 QEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFK 276 +G Y +S W+ ++++++V I + ++ K Sbjct: 238 HDGGT-----------DYLSETSEKEETTEDSMDWVAFKNQFFSAVMIAKDNFATGAKLK 286 Query: 277 YLSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR---FE 331 + + K + P + + G +F + E + + E Sbjct: 287 STPLEKSSHYLKHYEANMKAGFDPTGKRPSEFEFYFGPNDFRLLQSVETESKFAKELDME 346 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 L+ GW F + + F L V G+ ++L T+ +KL+ FP+ KK Y+S+A M Sbjct: 347 RLVYLGWPLFRIINRWFTLYVFDWLSKVFPMGVVLILITLLLKLITFPMVKKSYMSSAKM 406 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 + ++PK+DE ++F + Q+ ++ + Y + ++PL+GC P+L+Q+P++ A++ + Sbjct: 407 RVLKPKLDEATKQFNKPEDQMQKQQAMMQKYSEYGVSPLSGCLPMLIQMPIWIAMFNFVP 466 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMK 506 ++++R + W+ DL+ DP ++ L + ++ + Q K Sbjct: 467 NAIQLRGQS-FLWMHDLSTFDPIFSWSHDVWLVGDHISLTCILFCGANLLYTWFTMQQQK 525 Query: 507 MSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 Q ++ W MP+ F F + + +GL Y+ S S + + Sbjct: 526 DQMVGQQADQMKMMQWMMFGMPLFFFFMFNDYSSGLNFYYFISLFFSAAIMWAL-RKTTN 584 Query: 563 EIGLIDRLRSTFSKNYNS 580 E L+ L + + N+ Sbjct: 585 EEKLLAILEARREERKNN 602 >gi|221218111|ref|ZP_03589577.1| inner membrane protein OxaA [Borrelia burgdorferi 72a] gi|225548690|ref|ZP_03769737.1| inner membrane protein OxaA [Borrelia burgdorferi 94a] gi|221192059|gb|EEE18280.1| inner membrane protein OxaA [Borrelia burgdorferi 72a] gi|225370720|gb|EEH00156.1| inner membrane protein OxaA [Borrelia burgdorferi 94a] Length = 544 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 116/571 (20%), Positives = 230/571 (40%), Gaps = 47/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59 M ++ + LS+ ++ + ++++ + + D++ + + Sbjct: 1 MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKPSDKEVQFDLNKSFDDNEMSSVKS 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + S + ++ + + + L L+ + ++ L++ Sbjct: 61 NSFNLIDKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F + L N + + + + Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167 Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + VT N ++ F I + + ++ +Q + KY Sbjct: 168 YLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + W+G S KY+ + + + +FK + + Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350 K+I+ F++AG K+ + ++K F M ++ ++Y I PM M+M Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDNFFGMSVEKSFWYLIQVPMQMVM 333 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KF + P+ Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKK 392 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469 L + M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525 F Y + + I P IM + +S K Q L + MP+ Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F F L + P+GL+IYW +N+ +I+QQ I Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539 >gi|313157184|gb|EFR56614.1| membrane protein insertase, YidC/Oxa1 family [Alistipes sp. HGB5] Length = 656 Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats. Identities = 105/642 (16%), Positives = 230/642 (35%), Gaps = 71/642 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ + I + ++ + + + E+ E Q + + A D Sbjct: 1 MD--KKTILGIVVVAVLFLGF-AYVNTKQQEKYQQEMAAWQAYQDSVAAASRPAVPAADS 57 Query: 61 -----------------------------------------RAQALSMSPRVELKNPSLI 79 A + ++N + Sbjct: 58 VAGGAAESAVAASGETTAPEAEADLAQTVRQRRIAAMGEYLTAAQEAEPEEFTVENEVMT 117 Query: 80 GSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSN 139 + +G Q + L+ Y + + + NN+++ + Sbjct: 118 VRFSTRGGQITGVTLKDYTKYAPRGQRDQLIELMDPASARFDMSFYVKNGLNNVKVNTMD 177 Query: 140 TVWNLISGKILTPTTPIKLVFKNANNILFERTISL------DEHYLFKIVDTVTNNSIDQ 193 V+ + + + A N E + + YL + N + Sbjct: 178 YVFRAEPVETAGDARRVTMRLAVAENAWLEYEYLIYNKQAPERDYLVDFNVRLVNMAPQM 237 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGF--IAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251 + G + F + + +A ++ + + + + +W Sbjct: 238 ANQTSIGIDWSNVSYQNEKGFQNENMYTTLAYRFPGESSIEELGMSDGAKSKSVSTAVNW 297 Query: 252 LGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG 311 + ++++SVFI + S + + + FS + + G Sbjct: 298 VAFKQQFFSSVFIAPQNVSSANMAFDTAAPGSELLKSFSVQMAVPYSAQVEGYDFAFYFG 357 Query: 312 AKEFPTIHHYEKDLA----IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 ++ + + + R L + + + + + N +G+FGI I++ Sbjct: 358 PNKYAILKKVTDNNGADLHMERLIPLGWGIFGWVNRWCVIPVFDFLRNYIGSFGIIILIL 417 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINP 426 + VKL+ PL K YVS A M+ I+P++DEL +K+ + Q+A ++LYK INP Sbjct: 418 VILVKLVISPLTYKSYVSMAKMRLIKPQVDELNKKYPKKEDAMKKQQATMELYKKAGINP 477 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 + GC P+L+Q+P+ A+++ S+E+R P + W DL++ D +I L +PFY Sbjct: 478 MGGCIPMLIQLPILIAMFRFFPASIELREQP-FLWADDLSSYD--SIVNLPFSIPFYG-- 532 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI--LNWMPVVF-----VFALSSFPAGLI 539 HV ++ ++M++S+F + Q + + +M V + +S+ +GL Sbjct: 533 -DHVSLFALLMAVSLFGYSYFNYQQTASSQPQMAGMKFMMVYMMPIMMLLWFNSYSSGLC 591 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 Y+ SN+ +I Q VI + + + +++ ++ + Sbjct: 592 YYYLLSNLFTIGQTLVI-RRIVDDEKIHAVMQANAARKSKGK 632 >gi|255532481|ref|YP_003092853.1| 60 kDa inner membrane insertion protein [Pedobacter heparinus DSM 2366] gi|255345465|gb|ACU04791.1| 60 kDa inner membrane insertion protein [Pedobacter heparinus DSM 2366] Length = 600 Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats. Identities = 107/592 (18%), Positives = 212/592 (35%), Gaps = 46/592 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN--------- 51 M+ N F + L +I++ F+ E + + V N Sbjct: 1 MD--RNTFTGLFLIMIVLAGSFYFFKPSEAEIKKERERIAADSAKKAGVVNTPTPVAAVA 58 Query: 52 -----SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSP 106 AA+ A L+N +L ++ KG + + ++G N Sbjct: 59 ATPVVDSAALKGPFGANISGTVQTSVLENENLKLVLSNKGGKILSVEVKGEKT---YNGK 115 Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 V L K + + N + + + + N Sbjct: 116 PVILFDGDQNKFGLNLNISGKIVSTNDLYFTATP-----------GNGIVTMRANYSANQ 164 Query: 167 LFERTISLDEHYL---FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAV 223 E L F I N I + + + + Sbjct: 165 YIEYIYDLKPKSSQVGFNINLNGLNQVIQNNTIALNWEATLLEQEKSGKKEREHSAPYYK 224 Query: 224 LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHA 283 DK+ + EK ++ W+ +++++ IP +S Sbjct: 225 YADKNPDHLSIAKDEKEELAA--GKIEWISFKQQFFSAALIPKNGFEKGDLEVKVSTEPG 282 Query: 284 RYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA 343 + + + + + + + G +F T+ + + + + W Y Sbjct: 283 KIKWYGANMVLPFNQLAAQSYAMVFYFGTNKFDTLKAQGYE--LEKQVDMGYWPLKYINR 340 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + + + + N+G+ I+L T+ +K+ PL K Y+S A M+ ++P++D ++ K Sbjct: 341 FIVLPVFKFLESFNWNYGVIILLLTIALKVAMSPLTYKSYLSMAKMRILKPEMDVIKAKV 400 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 P +LQ+ ++LYK +NPL GC P+LLQ+P A + E+R + W+K Sbjct: 401 GDDNPTLLQQEYLKLYKQVGVNPLGGCLPMLLQLPFVMAFFFFFPNLFELRGE-TFLWMK 459 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILN 521 DL+ D F +PF H+ + ++M++S I + + M I Sbjct: 460 DLSTYDDFIKFG--FTIPFIG---DHLSLMCVLMTISTLIYTYFNNQISGATGQMKYIGY 514 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 MP++F+ L+S+P+GL Y+ +N+++ QQ +I K + + L+ Sbjct: 515 IMPIIFLGVLNSYPSGLNYYYFLANMLTFAQQFLI-KSMVDDEKIHRTLQEN 565 >gi|225549578|ref|ZP_03770544.1| inner membrane protein OxaA [Borrelia burgdorferi 118a] gi|225369855|gb|EEG99302.1| inner membrane protein OxaA [Borrelia burgdorferi 118a] Length = 544 Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats. Identities = 116/571 (20%), Positives = 230/571 (40%), Gaps = 47/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59 M ++ + LS+ ++ + ++++ + + D++ + + Sbjct: 1 MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKPSDKEVQFDLNKSFDDNEMSSVKS 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + S + ++ + + + L L+ + ++ L++ Sbjct: 61 NSFNLIDKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F + L N + + + + Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167 Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + VT N ++ F I + + ++ +Q + KY Sbjct: 168 YLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + W+G S KY+ + + + +FK + + Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350 K+I+ F++AG K+ + ++K F M ++ ++Y I PM M+M Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDNFFGMSVEKSFWYLIQVPMQMVM 333 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KF + P+ Sbjct: 334 QVFYDVMPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKK 392 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469 L + M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525 F Y + + I P IM + +S K Q L + MP+ Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F F L + P+GL+IYW +N+ +I+QQ I Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539 >gi|218249421|ref|YP_002374953.1| inner membrane protein OxaA [Borrelia burgdorferi ZS7] gi|226321751|ref|ZP_03797277.1| inner membrane protein OxaA [Borrelia burgdorferi Bol26] gi|254772749|sp|B7J208|OXAA_BORBZ RecName: Full=Inner membrane protein oxaA gi|218164609|gb|ACK74670.1| inner membrane protein OxaA [Borrelia burgdorferi ZS7] gi|226232940|gb|EEH31693.1| inner membrane protein OxaA [Borrelia burgdorferi Bol26] Length = 544 Score = 194 bits (492), Expect = 4e-47, Method: Composition-based stats. Identities = 116/571 (20%), Positives = 230/571 (40%), Gaps = 47/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M ++ + LS+ ++ + ++++ + + N+ + + Sbjct: 1 MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEISSVKS 60 Query: 61 RAQA-LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + ++ S + ++ + + + L L+ + ++ L++ Sbjct: 61 NSFNLINKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F + L N + + + + Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167 Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + VT N ++ F I + + ++ +Q + KY Sbjct: 168 YLMKFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + W+G S KY+ + + + +FK + + Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350 K+I+ F++AG K+ + ++K F M ++ ++Y I PM M+M Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVM 333 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KF + P+ Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKK 392 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469 L + M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525 F Y + + I P IM + +S K Q L + MP+ Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F F L + P+GL+IYW +N+ +I+QQ I Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539 >gi|256425563|ref|YP_003126216.1| hypothetical protein Cpin_6611 [Chitinophaga pinensis DSM 2588] gi|256040471|gb|ACU64015.1| 60 kDa inner membrane insertion protein [Chitinophaga pinensis DSM 2588] Length = 617 Score = 194 bits (492), Expect = 4e-47, Method: Composition-based stats. Identities = 110/604 (18%), Positives = 223/604 (36%), Gaps = 40/604 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE---RKNIQTVKQPNQVDNSYAAVL 57 M+ N + AL ++ + F+ + E + +I V +P VD + Sbjct: 1 MD--RNSVIGFALLGVLFVGY-IFFNQKQQTAAKREKDRQDSIANVNKPKPVDTAAYVNG 57 Query: 58 IDDRAQALSMS------------PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + L+ + L+N L + + +G Q + L+ + Sbjct: 58 GVADSSKLASAYGTFAGAANGTIQTAVLENKVLKVTFSSQGGQPTLVQLKQFKDFEGKP- 116 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 L+ +++ N ++ + T ++ + + +L N Sbjct: 117 ----LMLANSSFNRISLQVPANNNTQLNTSDLYFTGGSVQQLADGSQSISYRLPTSNPEQ 172 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATNTFGVQEGFIAVL 224 L + Y + + + V Sbjct: 173 YLEYVYTLKQDGYAVDFDIHAIGLENVLPSNQKTLSLQWDAENDKQEKDMQNERQNNQVH 232 Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 + Y +++++ + W+ + +++ + FI K+ F+ + Sbjct: 233 YRDVNGKHDYFTLQRTTHEKWDNQLQWVSVKQQFFNTTFIARKDAHFNGAEVNAKVPESA 292 Query: 285 YQAK--FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD-LAIPRFEMLIDWGWFYF 341 F+ EI T ++ G + T+ ++ +I I Y Sbjct: 293 NIVGQTFTTLEIPYNRAHDFTFPIEIYYGPNHYSTLKSFDNGLESIIPLGSGIFAFVKYV 352 Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + + ++ +GN+G+ I+L T+F++LL P + YVS A MK ++P+ID L+ Sbjct: 353 NKWIIIPVFNFLSGFIGNYGLIIILLTIFIRLLIAPFTYQSYVSQAKMKVLKPEIDALKA 412 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K Q ++L+++ +NPL GC P L+Q+P+ A+Y S+E+R + W Sbjct: 413 KHGD-DQQAFGVEQMKLFRSAGVNPLGGCLPALMQLPILVAMYSFFPSSIELRQES-FLW 470 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 DL+A D +I L +PFY HV ++ ++M+ + + + AD+ ++ Sbjct: 471 ATDLSAYD--SILNLPFTIPFYGN---HVSLFTLLMTATSLMLAFNNRGMADQSNP-VMK 524 Query: 522 WMPVVFVFA----LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 +MP VF + + L Y+ SNVISI Q I K + +++ K Sbjct: 525 YMPYVFPIMLLGIFNRLASALTFYYFLSNVISIGLQWAIQKFFVNHDKIHAQIQEN-KKK 583 Query: 578 YNSQ 581 S+ Sbjct: 584 PASK 587 >gi|203284351|ref|YP_002222091.1| 60kDa inner-membrane protein [Borrelia duttonii Ly] gi|254772750|sp|B5RLZ9|OXAA_BORDL RecName: Full=Inner membrane protein oxaA gi|201083794|gb|ACH93385.1| 60kDa inner-membrane protein [Borrelia duttonii Ly] Length = 545 Score = 194 bits (492), Expect = 4e-47, Method: Composition-based stats. Identities = 118/569 (20%), Positives = 227/569 (39%), Gaps = 47/569 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N A+ LS+ + + + + ++ D + + D Sbjct: 1 MSPNKRILRAVYLSLFFIGIFMLLDDFLFSRKASSFMNEEIKFDLNKDFDIDNSLIDEDF 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 S + + + G L L+ + L++ + + P N Y Sbjct: 61 TFNLSDNSEDINVDTDIYHATFATFGGNLISLKLKNH-LNLDKKPTEIVKMHPQNQSLFY 119 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 S +++ + +R + Sbjct: 120 ITLDKL-----------SKSLFLYEQIDSHVHDFKTNVEVNGKYYEYIKRYTFSKSNEYL 168 Query: 181 KIVDTVTNNS--IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 ++ NN D I ++ + + +Q + +Y Sbjct: 169 IKLEIFLNNIDVNDDIGIDFYKFVLNSGIEELSAKGKLQYNNYLSHAIYYDTKLRY---- 224 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + W+G KY+ + + + +FK+ + + L Sbjct: 225 -GKDGLNIANPKWVGAGTKYFEVLV---SKENMKVEFKHENKVLNAFILN-------KLD 273 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 K+++ +++AG ++ + + + L+ F M ++ YF+ PM ++M Sbjct: 274 NKNVSDVFYIYAGPRDNKYLDIFNQRELNSFGLSNVEFGMSVEKSLLYFLQVPMQLIMQI 333 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 FYN++ N+G++IM T+ V++L FPL K + +TA + +QPK+ E++ KF +S P+ L Sbjct: 334 FYNVIPNWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKF-KSDPKRLN 392 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPT 471 + M +LY+ +NP+ GC+PILLQ+PVFFA+Y +++ +R A F GWI DL+ D Sbjct: 393 EEMSKLYREEGVNPIGGCFPILLQLPVFFALYGLVNNFFVLRGASFIPGWIDDLSIGDSI 452 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVF 527 F + + + + I P IM ++ + +S + K Q L + MP++F Sbjct: 453 YYFG------YKVFAWTDIRILPFIMMITQLLSTIVSSNVSFKSLGAQQKFLYFGMPIMF 506 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVI 556 F L P+GL+IYW +N+ +I+QQ I Sbjct: 507 FFILYDMPSGLLIYWITTNIFTILQQYYI 535 >gi|89074710|ref|ZP_01161168.1| putative inner membrane protein translocase component YidC [Photobacterium sp. SKA34] gi|89049474|gb|EAR55035.1| putative inner membrane protein translocase component YidC [Photobacterium sp. SKA34] Length = 230 Score = 194 bits (492), Expect = 4e-47, Method: Composition-based stats. Identities = 93/228 (40%), Positives = 144/228 (63%), Gaps = 21/228 (9%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + D+GW FIA P+ L+++ + +VGN+GIAI++ T+ V+ L +PL K QY S A M+ + Sbjct: 10 IPDYGWSSFIASPLHELLAFIHGIVGNWGIAIIILTLIVRGLMYPLTKAQYTSMAKMRML 69 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPKI +RE+F Q + M++LYKT +NPL GC P+L+Q+P+F A+Y V+++S E Sbjct: 70 QPKIQAMRERFGD-DRQRQSQEMMELYKTEKVNPLGGCLPLLIQMPIFIALYTVLNLSTE 128 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511 +R+APF+GWI++L+A DP + PI+M +SMF K SP Sbjct: 129 LRNAPFFGWIQNLSAQDPYY-------------------VLPILMGISMFFIQKNSPSAV 169 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 D Q I+ +MPV+F FPAGL++YW SN+++++QQ +I + Sbjct: 170 TDPMQQKIMTFMPVIFTVFFLYFPAGLVLYWLTSNIVTLIQQTIIFRK 217 >gi|203287885|ref|YP_002222900.1| 60 kDa inner-membrane protein [Borrelia recurrentis A1] gi|254772753|sp|B5RRP5|OXAA_BORRA RecName: Full=Inner membrane protein oxaA gi|201085105|gb|ACH94679.1| 60 kDa inner-membrane protein [Borrelia recurrentis A1] Length = 545 Score = 194 bits (491), Expect = 5e-47, Method: Composition-based stats. Identities = 118/569 (20%), Positives = 227/569 (39%), Gaps = 47/569 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M N A+ LS+ + + + + ++ D + + D Sbjct: 1 MSPNKRILRAVYLSLFFIGIFMLLDDFLFSRKASSFMNEEIKFDLNKDFDIDNSLIDEDF 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 S + + + G L L+ + L++ + + P N Y Sbjct: 61 TFNLSDNSEDINVDTDIYHATFATFGGNLISLKLKNH-LNLDKKPTEIVKVHPQNQSLFY 119 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 S +++ + +R + Sbjct: 120 ITLDKL-----------SKSLFLYEQIDSHVHDFKTNVEVNGKYYEYIKRYTFSKSNEYL 168 Query: 181 KIVDTVTNNS--IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 ++ NN D I ++ + + +Q + +Y Sbjct: 169 IKLEIFLNNIDVNDDIGIDFYKFVLNSGIEELSAKGKLQYNNYLSHAIYYDTKLRY---- 224 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + W+G KY+ + + + +FK+ + + L Sbjct: 225 -GKDGLNIANPKWVGAGTKYFEVLV---SKENMKVEFKHENKVLNAFILN-------KLD 273 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEK------DLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 K+++ +++AG ++ + + + L+ F M ++ YF+ PM ++M Sbjct: 274 NKNVSDVFYIYAGPRDNKYLDIFNQRELNSFGLSNVEFGMSVEKSLLYFLQVPMQLIMQI 333 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 FYN++ N+G++IM T+ V++L FPL K + +TA + +QPK+ E++ KF +S P+ L Sbjct: 334 FYNVIPNWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQPKMKEIQVKF-KSDPKRLN 392 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPT 471 + M +LY+ +NP+ GC+PILLQ+PVFFA+Y +++ +R A F GWI DL+ D Sbjct: 393 EEMGKLYREEGVNPIGGCFPILLQLPVFFALYGLVNNFFVLRGASFIPGWIDDLSIGDSI 452 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG---QAMILNW-MPVVF 527 F + + + + I P IM ++ + +S + K Q L + MP++F Sbjct: 453 YYFG------YKVFAWTDIRILPFIMMITQLLSTIVSSNVSFKSLGSQQKFLYFGMPIMF 506 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVI 556 F L P+GL+IYW +N+ +I+QQ I Sbjct: 507 FFILYDMPSGLLIYWITTNIFTILQQYYI 535 >gi|303237161|ref|ZP_07323731.1| membrane protein insertase, YidC/Oxa1 family [Prevotella disiens FB035-09AN] gi|302482548|gb|EFL45573.1| membrane protein insertase, YidC/Oxa1 family [Prevotella disiens FB035-09AN] Length = 638 Score = 194 bits (491), Expect = 5e-47, Method: Composition-based stats. Identities = 99/610 (16%), Positives = 220/610 (36%), Gaps = 52/610 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNN---------------ERKNIQTVKQ 45 M+ N AL ++++ + + E ++ + + Sbjct: 1 MD--KNTIAGFALIALVLFGFAWWQQPSEKELAQQRTEFVKDSIANAKKIAKQKKEVAQT 58 Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYH------L 99 N+ + A A A + + LKN + ++N KG ++GY Sbjct: 59 ANKTIAANADTTALFYAAANGTAQNIVLKNNKVELTLNTKGGVVRQAIIKGYTGHNVTSK 118 Query: 100 DVSSNSPIVTLLSPSNTKNAYFAEL--DYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 D ++ VTL S ++ + + D + T N P++ T + + Sbjct: 119 DRKTDKQDVTLFSGADQELNFILATKQDNIETKNMYFTPSNVTDSTVTLTATDKSGKTLV 178 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 L +K + L I Q + + + + AT T+ Sbjct: 179 LDYKLKSPYLLSLNIKATGMNGLFKPGENQLLIDWQEKCKQQELGYTFENRYATLTYKES 238 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 EG Y K E W+ ++++++V I + ++ K Sbjct: 239 EGST-----------DYLSETKEDEKATEERLDWVAFKNQFFSAVMISKDGFAIGAKLKS 287 Query: 278 LSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + + K + P + + + G +F + E + + Sbjct: 288 IPQQKESHYLKQYHASMNTAFDPTGAKASQFEFYFGPNDFRLLQSVENQSTFGKSLDMQR 347 Query: 336 WGWFYFI-----AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + + + + + + + G+ ++L T+ +K + FP+ KK Y+S+A M+ Sbjct: 348 LVYLGWPLFRIINRWFTIYVFDWLSKLFPMGVVLILITLLLKFITFPMVKKSYMSSAKMR 407 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++PK+DE +++ + Q+ ++ + Y + ++PL+GC P+L+Q P++ A++ + Sbjct: 408 VLKPKLDEATKQYNKPEDQMQKQQAMMQMYSEYGVSPLSGCLPMLIQAPIWIAMFNFVPN 467 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQMKM 507 ++++R + W+ DL+ DP ++ + + I+ S Q K Sbjct: 468 AIQLRGE-KFLWMDDLSTFDPIISWSQNLWIIGDHISLTCILFCATNILYSWFTMQQQKD 526 Query: 508 SPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q ++ MPV F F + + +GL Y+ S S + + + Sbjct: 527 QMVGQQAEQMKTMQWMMYLMPVFFFFMFNDYSSGLNFYYFISLFFSAAIMWTL-RKTTDD 585 Query: 564 IGLIDRLRST 573 L+ L + Sbjct: 586 EKLLSILEAR 595 >gi|312148357|gb|ADQ31016.1| inner membrane protein OxaA [Borrelia burgdorferi JD1] Length = 544 Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats. Identities = 116/571 (20%), Positives = 230/571 (40%), Gaps = 47/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M ++ + LS+ ++ + ++++ + + N+ N + Sbjct: 1 MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFNDNEMSSVKS 60 Query: 61 RAQA-LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + ++ S + ++ + + + L L+ + ++ L++ Sbjct: 61 NSFNLINKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F + L N + + + + Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167 Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + VT N ++ F I + + ++ +Q + KY Sbjct: 168 YLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + W+G S KY+ + + + +FK + + Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350 K+I+ F++AG K+ + ++K F M ++ ++Y I PM M+M Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVM 333 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 FY+++ N+G++I+ T+ V++L FPL K + +TA + +QP++ EL+ KF + P+ Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPRMKELQAKF-KHDPKK 392 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469 L + M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525 F Y + + I P IM + +S K Q L + MP+ Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F F L + P+GL+IYW +N+ +I+QQ I Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539 >gi|34540342|ref|NP_904821.1| putative inner membrane protein translocase component YidC [Porphyromonas gingivalis W83] gi|38502879|sp|P60036|OXAA_PORGI RecName: Full=Inner membrane protein oxaA gi|34396654|gb|AAQ65720.1| membrane protein, putative [Porphyromonas gingivalis W83] Length = 627 Score = 193 bits (489), Expect = 7e-47, Method: Composition-based stats. Identities = 112/618 (18%), Positives = 233/618 (37%), Gaps = 54/618 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-------Y 53 M+ N + + L ++++ + E + I+ +Q + Sbjct: 1 MD--KNTVIGLVLIGLVIFGFSWLNRPDPQEIEAQRKAAIEAARQDSIAKAEAELLAART 58 Query: 54 AAVLIDDRAQALSMSP-------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 D QA + +VEL N + ++ KG ++ LR Y Sbjct: 59 QGATPDSIKQAAGYNQYGLLAAATAGAEEQVELANGKIALKLSTKGGAIREVLLRDYKT- 117 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 + + L + + +L S S + + Sbjct: 118 --HDGKPLYLFREGESDFNLPLRTVDNRLVDTRDLYFSPISRTDSSVVMRLAVDSASYLD 175 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTN-NSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + L + Y ++ + N S+ + + + + ++ + Sbjct: 176 LA--------YVLLPDDYRLRMTVSGQNLQSLFPANMTMQDLEWSQRIRRQEKSWKFENQ 227 Query: 220 FIAVLGDKSLVEQK-YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + ++ S E SD ++ E W+ DKY+ASV + + + Sbjct: 228 YTSIYYKYSGDEVDRLSDSKQEDKKTLEEPLHWVSFKDKYFASVLVCDSYFENNKLAQKT 287 Query: 279 SDGHARYQAKFSANEITILPGKSIT-TTNFLFAGAKEFPTIHHYEKDL------AIPRFE 331 + + Y + + L +S T F G ++ + Y+K + + Sbjct: 288 AAAGSDYLKNCTMSATFPLDVRSGTKARFTFFFGPLKYNMLRAYDKGMKAEDNLDLDHLV 347 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 L + + + ++ N+G+ I+L T+ +KLL PLA K Y+S+A M+ Sbjct: 348 YLGASIFRWINRYMIIPASTFLQQYFSNWGLIILLLTLGIKLLISPLAYKGYLSSAKMRL 407 Query: 392 IQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 ++P++ E+ K+ Q A + LY+ P++GC P+LLQ P A+Y Sbjct: 408 LRPQVQEINAKYPGKDQESMMKRQSATMNLYRAAGAGPMSGCLPMLLQFPFLIAMYMYFP 467 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 ++++R + W +DL++ D +T L HV ++ ++MS+S + ++ + Sbjct: 468 TTIDIRQQS-FLWAEDLSSYDAVFSWTADIPL-LSQFYGNHVSLFCLLMSISNILYIRYT 525 Query: 509 PPPADKGQ--AMILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +D GQ +L WMP V+F+F + +GL Y+ S++I+++Q + + Sbjct: 526 MNQSDTGQEGMAMLKWMPYITTVMFLFFFNQNASGLCYYYFLSSIITVIQ-YMSSRFIIN 584 Query: 563 EIGLIDRLRSTFSKNYNS 580 E L+ +L + +K Sbjct: 585 EEKLMAKLEANKTKPRKK 602 >gi|313886342|ref|ZP_07820067.1| membrane protein insertase, YidC/Oxa1 family [Porphyromonas asaccharolytica PR426713P-I] gi|332300282|ref|YP_004442203.1| Membrane protein oxaA [Porphyromonas asaccharolytica DSM 20707] gi|312924211|gb|EFR34995.1| membrane protein insertase, YidC/Oxa1 family [Porphyromonas asaccharolytica PR426713P-I] gi|332177345|gb|AEE13035.1| Membrane protein oxaA [Porphyromonas asaccharolytica DSM 20707] Length = 626 Score = 193 bits (489), Expect = 8e-47, Method: Composition-based stats. Identities = 100/573 (17%), Positives = 217/573 (37%), Gaps = 32/573 (5%) Query: 29 RIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQ 88 +++ ++ + V + L L+N L + + +GA Sbjct: 41 QVQTNTAVAATEESQTTSDAVKPAPVDSLYAFSQLMSQPVKEYTLQNEKLCVTFSTQGAM 100 Query: 89 FDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGK 148 L Y +S +S V L +P + F + T N L + +W + + Sbjct: 101 PVSAELADY---LSYDSTQVRLFAPGD-----FMLNLPIRTNQNQILETKDLIWQ--ANQ 150 Query: 149 ILTPTTPIKLVFKNANNILFERTISLDEHY-LFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 T + L +++ + T+ + + I + + + P Sbjct: 151 PNDSTLLMTLPIDSSSYLRIIYTMPHEGYMLGMAIEAQGLGSLLQSNNAIQDLEMSLRIP 210 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 + + + + +K + + + E W+ + DK++++V I Sbjct: 211 RQERSWKFENQYSTIYYKYPADDVEKLKETKMEQEKDVREKIQWVAMKDKFFSTVLIGLG 270 Query: 268 E---TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 + FK + + LF G ++ + + Sbjct: 271 DTRLEGNKMSFKTEPKETDYIKVCNYKGSFAMDIRDGRKADFALFMGPLDYNMLKGMDAG 330 Query: 325 LAIPRFEMLIDWGWF------YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 + + L + + + L+ + + N+GI I+L T+ +KL+ PL Sbjct: 331 VDKAQRLDLKRMIYVGGSLFRWINVTLIRPLIDFLQGFISNWGIIILLLTLIIKLVLSPL 390 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILL 435 K Y+S A M+ ++P+++ + K+ Q++ +A +QLY+ +P++GC P+LL Sbjct: 391 TFKSYMSQAKMRVLKPQVEAINAKYAGDDQQMMMKRSQATMQLYRNAGASPMSGCLPMLL 450 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+P A+Y ++++R + W+KDL+ DP ++ L G H+ ++ + Sbjct: 451 QMPFLIALYMFFPTAIDLRGES-FLWVKDLSTYDPIISWSTDIPFITGLLGGNHISLFCL 509 Query: 496 IMSLSMFIQMKMSP---PPADKGQAMILNWMPVVFVFALSSF----PAGLIIYWSWSNVI 548 + +++ I + + AD Q ++ +MP + F AGL Y+ S +I Sbjct: 510 LWAVTNIIYSRYTMSMSAGADNSQMKMMRFMPYIMTIMFFIFFNSNAAGLTYYYFISTLI 569 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +I+Q V ++ E ++ RL K + Sbjct: 570 TILQ-FVASRLLINEEKVLARLEENQRKPKKKK 601 >gi|205356681|ref|ZP_03223442.1| putative membrane protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345419|gb|EDZ32061.1| putative membrane protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 403 Score = 193 bits (489), Expect = 8e-47, Method: Composition-based stats. Identities = 116/398 (29%), Positives = 199/398 (50%), Gaps = 49/398 (12%) Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 E+ I+ ++I ++ N+ ++P A +++ V + + Sbjct: 44 KIEKDITFYPKGNYEIEVKLSKNAN-------YFISPGYRPNIAVDSYTVHGALV-MDNK 95 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQ 286 +++ K D+EK +N S D+Y+A+ F Sbjct: 96 ETIETYKDGDVEKDESANNVVMTSAF---DRYYAT------------FFYNFDKPLNVAI 140 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 +K + + + G+KE + + PR E ++++GWF FIAKPM Sbjct: 141 SKDTNQNPIVFAYSDNEFKAGGYIGSKEHVILRSID-----PRLEAVVEYGWFTFIAKPM 195 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F +++ + + N+G AI++ T+ V+++ FPL K +S +K++ PK+ ++RE++K Sbjct: 196 FEFLNFLHQYIENWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKG- 254 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 PQ + M++LYK H NP++GC PILLQIP+FFAIY+V+ ++E++ AP+ WI DL+ Sbjct: 255 DPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLS 314 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPV 525 DP I PI+M +MF+Q ++P D QA I+ ++PV Sbjct: 315 VMDPYF-------------------ILPILMGATMFLQQLITPITIQDPMQAKIMKFLPV 355 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +F F +FPAGL +YW +N+ S+VQQ VI K+ E Sbjct: 356 IFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKIFVKE 393 >gi|110638943|ref|YP_679152.1| putative inner membrane protein translocase component YidC [Cytophaga hutchinsonii ATCC 33406] gi|123058652|sp|Q11S04|OXAA_CYTH3 RecName: Full=Inner membrane protein oxaA gi|110281624|gb|ABG59810.1| protein translocase subunit yidC [Cytophaga hutchinsonii ATCC 33406] Length = 620 Score = 193 bits (489), Expect = 8e-47, Method: Composition-based stats. Identities = 112/604 (18%), Positives = 222/604 (36%), Gaps = 50/604 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + I+L +++ + F E I Q + V AA Sbjct: 1 MD--KNQIIGISLISVLMLGYFGFMSTQTPETPVTTPPAITQPVQSDTVLLKSAATDTAL 58 Query: 61 RAQA-----------LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT 109 +AQ + + +L+N ++ +++ KG + L+ Y + + Sbjct: 59 KAQNQREYGDFAAAMVGEAKEYKLENKDVVVTLSTKGGTIKSVLLKNYFT---WDKKQLF 115 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 L N + + N + + +++ + N E Sbjct: 116 LFKQENNQLSLIL-------NTNKKPVDLYSLYYAGVESKAGDKQVVTFKTDAGNGKTIE 168 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 T +L F + + + + + Q + + + Sbjct: 169 HTYTL-GAAGFTVDYNLKAAGFGGELPNLPLTLDWREQVERIEYDSEQARVKSTVNYMAA 227 Query: 230 VEQKYS--DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + K + + W+ + K++ S F + + S ++ Sbjct: 228 EDGFDYLSEASKDRETETLSNVYWVSLKQKFFNSGFYIREGGTIPSATVTAYPMYSTLPN 287 Query: 288 KFSANEITILPGK-----------SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 +E I + S + G +F + + Sbjct: 288 APVNSEKFIKALEAQVQLPLEAVISGKAAYAFYFGPNDFKICKAVPAENYQKNVNLG-WP 346 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + + + + +FG+ I++ + +KL+ PL+ K +VS A MK ++P++ Sbjct: 347 LVSWINRFVVIPVFDGLKGVFSSFGLIIVILVLLIKLVLLPLSYKSFVSMAKMKALKPEL 406 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 DEL+ K Q +Q +Q+YK INPL+GC P+LLQ+P+ A++ ++++R Sbjct: 407 DELKAKHGD-DQQAIQMEQMQVYKQFGINPLSGCIPVLLQMPILLAMFNFFPNAIDLRGE 465 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPAD 513 W DL++ D L +PFY HV ++ ++M++S ++ Sbjct: 466 S-LWWATDLSSYD--EFAKLPFTIPFYGS---HVSMFTLLMTISTLAYTWVNNQVSTVTG 519 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + MPVVF+F L+SFPAGL Y+ SN+++I QQ +I + E L +L + Sbjct: 520 PM-KYMSYAMPVVFLFVLNSFPAGLSFYYFVSNLVTIAQQLII-RRFVDEGQLRLQLEAK 577 Query: 574 FSKN 577 KN Sbjct: 578 RDKN 581 >gi|224533541|ref|ZP_03674130.1| inner membrane protein OxaA [Borrelia burgdorferi CA-11.2a] gi|224513214|gb|EEF83576.1| inner membrane protein OxaA [Borrelia burgdorferi CA-11.2a] gi|312149425|gb|ADQ29496.1| inner membrane protein OxaA [Borrelia burgdorferi N40] Length = 544 Score = 192 bits (488), Expect = 1e-46, Method: Composition-based stats. Identities = 116/571 (20%), Positives = 231/571 (40%), Gaps = 47/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59 M ++ + LS+ ++ + ++++ + + D++ + + Sbjct: 1 MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKS 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + ++ S + ++ + + + L L+ + ++ L++ Sbjct: 61 NSFNLINKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F + L N + + + + Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167 Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + VT N ++ F I + + ++ +Q + KY Sbjct: 168 YLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + W+G S KY+ + + + +FK + + Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350 K+I+ F++AG K+ + ++K F M ++ ++Y I PM M+M Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVM 333 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KF + P+ Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKK 392 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469 L + M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525 F Y + + I P IM + +S K Q L + MP+ Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F F L + P+GL+IYW +N+ +I+QQ I Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539 >gi|15605744|ref|NP_213121.1| hypothetical protein aq_175 [Aquifex aeolicus VF5] gi|38502858|sp|O66561|OXAA_AQUAE RecName: Full=Inner membrane protein oxaA gi|2982916|gb|AAC06534.1| hypothetical protein aq_175 [Aquifex aeolicus VF5] Length = 502 Score = 192 bits (488), Expect = 1e-46, Method: Composition-based stats. Identities = 115/561 (20%), Positives = 226/561 (40%), Gaps = 80/561 (14%) Query: 1 MERN-----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAA 55 M N + + L + + A++ FY+Y + + + VK+ + + Sbjct: 1 MMDNDNQFWKRFLIFTILMFLFITAYELFYIYYVKPSQPQKTEKKEVVKKEEFKNVNLPQ 60 Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 +++ + +K ++ KG + + Y D+ S + + P Sbjct: 61 LMLGTFREKQEYKNTKTVKLGIYSLELSEKGGKILRFIDQKYGFDLISKAERELKIFP-- 118 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 L+ + +++ + + + GK +L + I Sbjct: 119 --------LEIFTGNPDLDQKLNFGEYEIKEGKNSVELIHKELK---------VKKILSY 161 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 ++ + P + P + + + G+ ++ Sbjct: 162 KNGAIHLSVEGL---------KPPFWVFVGSPPDDEAFYTHVGPVLKINGEVVRLDVDD- 211 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 I+ F + + G +Y+ + Y KF + Sbjct: 212 ---LKGINEFEGNIEFGGEESRYFF-----KGAKDYQKHIVYKVKLGD----KFVSLSTF 259 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN 355 + G+ ++ GAK++ + +DWG I KP+F+ + + Y Sbjct: 260 LYDGEKT-----IYLGAKDYARLREL-------GLVDTLDWGTLKIIVKPLFLFLYWIYE 307 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 G++ ++I++ T V++ FPL K VS ++ + PK++++++K+K P ++ Q+ M Sbjct: 308 HTGSWVLSILVLTFIVRIFLFPLGYKSVVSMQKLQELAPKMEKIKQKYKDDPVKM-QEEM 366 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 ++LY NP+AGC PILLQIP+FFA+YKV+ I+++++ + WI LA DP Sbjct: 367 MKLYAETGFNPMAGCLPILLQIPIFFALYKVLIITVDLK-VSSFLWIPSLADKDPYY--- 422 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 I P+IM L+M +Q KM+P P D QA++ V F +FP Sbjct: 423 ----------------ILPVIMGLTMILQQKMTPSP-DPKQALVGYITSVAFTLLFINFP 465 Query: 536 AGLIIYWSWSNVISIVQQAVI 556 AGL++YW+ +NV +I+Q +I Sbjct: 466 AGLVLYWTLNNVFNIIQNYLI 486 >gi|216264429|ref|ZP_03436421.1| inner membrane protein OxaA [Borrelia burgdorferi 156a] gi|215980902|gb|EEC21709.1| inner membrane protein OxaA [Borrelia burgdorferi 156a] Length = 544 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 111/568 (19%), Positives = 230/568 (40%), Gaps = 41/568 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59 M ++ + LS+ ++ + ++++ + + D++ + + Sbjct: 1 MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKS 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + ++ S + ++ + + + L L+ + ++ L++ Sbjct: 61 NSFNLINKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F + L N + + + + Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + + VT N ++ + ++ + + S + + ++ Sbjct: 168 YLMKFKVTVNGLEDY--NLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY 225 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + W+G S KY+ + + + +FK + + Sbjct: 226 GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGILKSFIIN------NVRNK 276 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLMSYF 353 K+I+ F++AG K+ + ++K F M ++ ++Y I PM M+M F Sbjct: 277 KNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVF 336 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y+++ N+G++I+ T+ V++L FPL K + +TA + +QP++ EL+ KF + P+ L + Sbjct: 337 YDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPRMKELQVKF-KHDPKKLNE 395 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472 M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 396 EMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVY 455 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVFV 528 F Y + + I P IM + +S K Q L + MP++F Sbjct: 456 HFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFF 511 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 F L + P+GL+IYW +N+ +I+QQ I Sbjct: 512 FILYNMPSGLLIYWITTNIFTILQQYYI 539 >gi|223888963|ref|ZP_03623554.1| inner membrane protein OxaA [Borrelia burgdorferi 64b] gi|223885779|gb|EEF56878.1| inner membrane protein OxaA [Borrelia burgdorferi 64b] Length = 544 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 116/571 (20%), Positives = 231/571 (40%), Gaps = 47/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59 M ++ + LS+ ++ + ++++ + + D++ + + Sbjct: 1 MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKS 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + ++ S + ++ + + + L L+ + ++ L++ Sbjct: 61 NSFNLINKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F + L N + + + + Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167 Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + VT N ++ F I + + ++ +Q + KY Sbjct: 168 YLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + W+G S KY+ + + + +FK + + Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350 K+I+ F++AG K+ + ++K F M ++ ++Y I PM M+M Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFNIFFGMSVEKSFWYLIQVPMQMVM 333 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KF + P+ Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKK 392 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469 L + M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525 F Y + + I P IM + +S K Q L + MP+ Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F F L + P+GL+IYW +N+ +I+QQ I Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539 >gi|224532508|ref|ZP_03673133.1| inner membrane protein OxaA [Borrelia burgdorferi WI91-23] gi|224512580|gb|EEF82956.1| inner membrane protein OxaA [Borrelia burgdorferi WI91-23] Length = 544 Score = 192 bits (487), Expect = 2e-46, Method: Composition-based stats. Identities = 112/568 (19%), Positives = 230/568 (40%), Gaps = 41/568 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59 M ++ + LS+ ++ + ++++ + + D++ + + Sbjct: 1 MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKS 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + ++ S + ++ + + + L L+ + ++ L++ Sbjct: 61 NSFNLINKSQDIIVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F + L N + + + + Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + + VT N ++ + ++ + + S + + ++ Sbjct: 168 YLMQFKVTVNGLEDY--NLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY 225 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + W+G S KY+ + + + +FK + + Sbjct: 226 GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NVRNK 276 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLMSYF 353 K+I+ F++AG K+ + ++K F M ++ ++Y I PM M+M F Sbjct: 277 KNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVF 336 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KF + P+ L + Sbjct: 337 YDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKKLNE 395 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472 M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 396 EMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVY 455 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVFV 528 F Y + + I P IM + +S K Q L + MP++F Sbjct: 456 HFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPIMFF 511 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 F L + P+GL+IYW +N+ +I+QQ I Sbjct: 512 FILYNMPSGLLIYWITTNIFTILQQYYI 539 >gi|255534414|ref|YP_003094785.1| OxaI/YidC membrane insertion protein [Flavobacteriaceae bacterium 3519-10] gi|255340610|gb|ACU06723.1| OxaI/YidC membrane insertion protein [Flavobacteriaceae bacterium 3519-10] Length = 604 Score = 192 bits (486), Expect = 2e-46, Method: Composition-based stats. Identities = 106/595 (17%), Positives = 224/595 (37%), Gaps = 34/595 (5%) Query: 1 MERN----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N ++ AL +I+ ++ + E + Sbjct: 1 MQQNNGLDKNQLISFALFSLILIGAMFYFQNKQATEQQLINAQNPAQTASAATAPATKPA 60 Query: 57 LIDDRAQALSMS--PRVELKNPSLIGSINLKGAQFDDLNLRGYHL---DVSSNSPIVTLL 111 +I + +L + +V+LKN L S++ G Q + L Y +N + L Sbjct: 61 VITNLNDSLKTTSIQQVQLKNKELTLSVSSLGGQISTVQLNEYKAYNRKTDANDKELLLF 120 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 +N+ + + T N +L + + ++ Sbjct: 121 DKNNSTYGFQFKDKTGKTFNTKDLVF----------TPTQNGNTVTMQANVNGAVIQFIY 170 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 LD++ + V + Q+ + + QE Sbjct: 171 TLLDKYT---VDFNVKTQGLSQLVSDQKATFVWDFNAREMEKGRSQEQTHTEFNYSFDNY 227 Query: 232 QKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 + ++S+ E+ +WL I +++++V P + + D + F+ Sbjct: 228 SSFDYDGRTSMEEPDETLNWLAIKQQFFSAVIEPQTGFKNSVGSQEMIDEGE-FLKTFNF 286 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMS 351 N L G + + + P + Y+K+ F+ L+ GW + + + Sbjct: 287 NGQVDLAGNELNQNFKWYFMPLDLPLLKSYDKN-----FDELLPLGWSFIGTMNRWFFIP 341 Query: 352 YFY---NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 + + G I L T+ VK++ P+ KQ+ +A M+ I+P+IDE+ K+K + P Sbjct: 342 MYNLISSWGIAAGWVIFLMTIIVKIILSPVMFKQHKLSAMMRVIRPEIDEVNAKYKDADP 401 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 Q+ + +Y+ +N +AGC P LLQIP+F+A+++ +++R + + KDL A Sbjct: 402 MKKQQETMAVYRKAGVNQMAGCLPALLQIPIFYALFRFFPNMIDLRGKS-FWFAKDLTAY 460 Query: 469 DPTNI--FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 D F + + + + +I ++ ++ +++ P+ Sbjct: 461 DDVIKLPFNIPFLGEHLSIFAIACTVVILIYTVMTSGNIQQPQQEGMPNMKVLMYIFPIT 520 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 F+F L++ +GL Y+ SN I+I+ VI E + +++ K + Sbjct: 521 FLFFLNTGASGLSWYYFVSNAINILIILVIKYWILDEKKIHATIQANKQKEPKKE 575 >gi|15594787|ref|NP_212576.1| putative inner membrane protein translocase component YidC [Borrelia burgdorferi B31] gi|38502849|sp|O51398|OXAA_BORBU RecName: Full=Inner membrane protein oxaA gi|2688353|gb|AAB91510.1| inner membrane protein [Borrelia burgdorferi B31] Length = 544 Score = 192 bits (486), Expect = 2e-46, Method: Composition-based stats. Identities = 116/571 (20%), Positives = 231/571 (40%), Gaps = 47/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59 M ++ + LS+ ++ + ++++ + + D++ + + Sbjct: 1 MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKS 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + ++ S + ++ + + + L L+ + ++ L++ Sbjct: 61 NSFNLINKSQDIIVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F + L N + + + + Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167 Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + VT N ++ F I + + ++ +Q + KY Sbjct: 168 YLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + W+G S KY+ + + + +FK + + Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350 K+I+ F++AG K+ + ++K F M ++ ++Y I PM M+M Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVM 333 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KF + P+ Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKK 392 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469 L + M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525 F Y + + I P IM + +S K Q L + MP+ Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F F L + P+GL+IYW +N+ +I+QQ I Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539 >gi|329908682|ref|ZP_08274922.1| OxaI/YidC membrane insertion protein [Oxalobacteraceae bacterium IMCC9480] gi|327546632|gb|EGF31596.1| OxaI/YidC membrane insertion protein [Oxalobacteraceae bacterium IMCC9480] Length = 198 Score = 192 bits (486), Expect = 2e-46, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 136/210 (64%), Gaps = 20/210 (9%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M+ + ++GN+G I++ T+ +KL FFPL+ Y S A MK + PK+ +RE+F +S PQ Sbjct: 1 MTQIHKILGNWGWTIIVLTMLIKLAFFPLSAASYRSMAKMKMVTPKMTAIRERF-KSDPQ 59 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 + +AM+ LYKT INPL GC PI++QIPVF ++Y V+ S+EMR+AP+ GWI+DLA+ D Sbjct: 60 KMNQAMMALYKTEKINPLGGCLPIVVQIPVFISLYWVLLASVEMRNAPWLGWIQDLASPD 119 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I P++M++SMF+Q K++P P D QA I+ +MP++F Sbjct: 120 PYY-------------------ILPVLMAVSMFVQTKLNPKPPDPMQAKIMMFMPIIFSV 160 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 FP+GL++YW +NV+SI QQ VI K Sbjct: 161 MFFFFPSGLVLYWVVNNVLSIAQQWVITKK 190 >gi|332885946|gb|EGK06190.1| hypothetical protein HMPREF9456_00064 [Dysgonomonas mossii DSM 22836] Length = 650 Score = 192 bits (486), Expect = 2e-46, Method: Composition-based stats. Identities = 100/595 (16%), Positives = 222/595 (37%), Gaps = 64/595 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV----------------- 43 M+ N L ++ + + +++ I+ Sbjct: 1 MD--KNTITGFILIAAVIIGFTLLSRPSSEDIERQKQQRIKDSIEYAQTLQREQENKIDT 58 Query: 44 --------------KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89 Q +S AV + + L+N L + + KG + Sbjct: 59 SVVDKKTEKIDDFFSASAQQSDSTVAVTDSLPSAEQKPEQFITLENSKLKATFSTKGGRM 118 Query: 90 DDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI 149 + L+ Y + L N A+ + T ++ ++ + K Sbjct: 119 VRVQLKDYMSYNRDDKKNTDSLYLFNND----ADFTLLLTNKQQKVLSTGKLIFTPIQKE 174 Query: 150 LTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT 209 + ++ + ++ I F ++ D++ + ++ V + +S + + Sbjct: 175 GDNSLIMRYAYSDSQYIDFVYKLADDDYMMKYDINMVGMQPMLARTYSDVFEMKWSQRMR 234 Query: 210 ATNTFGVQEGFIAV-LGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 E + + K +K+ E W+ ++++A + I + Sbjct: 235 RQEKSVKNEQRYSHLTYKYVGGDVKEMSSDKNEEVEVKEPAKWIAFKNQFFAPILIADDK 294 Query: 269 TSF------HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYE 322 Q S+ ++A +SIT + G + + +Y+ Sbjct: 295 IETALLNSKVLQTDENSEYLKSFEATLYVPAKPGSAPESITAGFSYYLGPMSYSLLKNYD 354 Query: 323 -------KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 K+L + + L + + + + + N + GI I+L T+ VKL+ Sbjct: 355 SNVKDANKELDLDKLVPLGWTLFRWVNQYFIVPIFNLLSNTGLSMGIVILLLTIIVKLVI 414 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPIL 434 PL K ++S+A M+ ++P+++E+ EK+ + Q+A + LY +NP++GC P+L Sbjct: 415 SPLTYKSFMSSAKMRVLRPQVEEINEKYPKQEQAMEKQQATMALYSKAGVNPMSGCVPML 474 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 LQ+P+ A++ ++E+R + W DL+ D IF +P H+ ++ Sbjct: 475 LQMPILIALFSFFPNAIELRQQS-FLWATDLSTYD--AIFEWKNHIPLIGT---HISLFC 528 Query: 495 IIMSLSMFIQMKMSPPPADKGQAM------ILNWMPVVFVFALSSFPAGLIIYWS 543 I+M+++ + K + + GQ ++ MP++F+F L+ +P+GL Y+ Sbjct: 529 ILMTITNIVYTKFNMEMTNTGQQQMPGMKWMMYLMPLIFLFMLNDYPSGLTYYYF 583 >gi|325954218|ref|YP_004237878.1| membrane protein oxaA [Weeksella virosa DSM 16922] gi|323436836|gb|ADX67300.1| Membrane protein oxaA [Weeksella virosa DSM 16922] Length = 619 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 109/608 (17%), Positives = 225/608 (37%), Gaps = 47/608 (7%) Query: 1 MERNWNY----FVAIALSVIIVYAWQNFYVYPRIEEMNNERKN----IQTVKQPNQVDNS 52 M++ N+ + L I++ + P EE+ +++ T K + Sbjct: 1 MQKERNFDFNQLIGFVLI-AILFGVYFWMTKPSEEELARQKQELLAKEATEKNKGTQKDI 59 Query: 53 YAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD---VSSNSPIVT 109 Q + V +N + +N +G Q + L+ + ++ + Sbjct: 60 AQFPTDSLATQQVVKEENVTFENEHVKIQVNGRGGQIGLVQLKEHLAFDSLKGVDAQPLY 119 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 L+ N+ + + N + N+ + + T + + + Sbjct: 120 LVKDGNS------QFNLSFKDINGKTINTKELIFSPKQEQKGSTKVLTMTAQIGAGQ-LH 172 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 S D+ Y + Sbjct: 173 YIYSFDDKYGLDFQIRSQGLHRVTHDKNIALNWNLDAFSLEKGKDQEHYWSHTYFKLSGK 232 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD-GHARYQAK 288 +Y ES W+ +++AS+ + + G ++Y Sbjct: 233 NSVEYELFGADKWEE-KESIDWIAFKQQFFASILSFDGGLKNTNGGSINYEIGKSKYNKG 291 Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY--FIAKPM 346 F+ + + I +F + Y FE ++ +GW + ++ K Sbjct: 292 FNFSAPIEIKSGEINQHLSWDFVPLDFNNLKKY----NDKGFEKIVSYGWGFLGWLNKYF 347 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F+ + + +G AI L T+ VKL+ P+ KQY +A MK ++P+++EL EKFK Sbjct: 348 FLFIFQSLAKIVPYGWAIFLMTIVVKLVLSPIMYKQYRQSAMMKVLRPELNELNEKFKDP 407 Query: 407 PP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 Q+A +++Y+ +NPLAGC P LLQIP+F+A+++ +++R P + + +DL Sbjct: 408 KDAMKKQQATMEIYRKAGVNPLAGCLPALLQIPIFYALFRFFPNVIDLRGEP-FWFAEDL 466 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--------SPPPADKG-- 515 A D ++ + +PF H+ I+ ++ ++M + K+ + P + Sbjct: 467 TAFD--SVIQIPASIPFLNG---HLSIFALLYIVAMMVYFKVSGSMDNFNNMPQQEGMPN 521 Query: 516 ---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 ++ MP+ F L+++ +GL Y+ SNVI+I I + E + ++ Sbjct: 522 MQFMKYMMYIMPIFFFVFLNNYASGLSWYYLVSNVINIFIVLYIKNVMIKEDKIHAMIQE 581 Query: 573 TFSKNYNS 580 +K + Sbjct: 582 NKAKPMKT 589 >gi|188995310|ref|YP_001929562.1| putative inner membrane protein translocase component YidC [Porphyromonas gingivalis ATCC 33277] gi|254773011|sp|B2RKS0|OXAA_PORG3 RecName: Full=Inner membrane protein oxaA gi|188594990|dbj|BAG33965.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 627 Score = 191 bits (484), Expect = 3e-46, Method: Composition-based stats. Identities = 111/618 (17%), Positives = 232/618 (37%), Gaps = 54/618 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-------Y 53 M+ N + + L ++++ + E + I+ +Q + Sbjct: 1 MD--KNTVIGLVLIGLVIFGFSWLNRPDPQEIEAQRKAAIEAARQDSIAKAEAELLAART 58 Query: 54 AAVLIDDRAQALSMSP-------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 D QA + +VEL N + ++ KG ++ LR Y Sbjct: 59 QEATPDSIKQAAGYNQYGLLAAATAGAEEQVELANGKIALKLSTKGGAIREVLLRDYKT- 117 Query: 101 VSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 + + L + + +L S S + + Sbjct: 118 --YDGKPLYLFREGESDFNLPLRTLDNRLVDTRDLYFSPISRTDSSVVMRLAVDSASYLD 175 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTN-NSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 + L + Y ++ + N S+ + + + + ++ + Sbjct: 176 LA--------YVLLPDDYRLRMTVSGQNLQSLFPANMTMQDLEWSQRIRRQEKSWKFENQ 227 Query: 220 FIAVLGDKSLVEQK-YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + ++ S E SD ++ E W+ DKY+ASV + + + Sbjct: 228 YTSIYYKYSGDEVDRLSDSKQEDKKTLEEPLHWVSFKDKYFASVLVCDSYFENNKLAQKT 287 Query: 279 SDGHARYQAKFSANEITILPGKSITTT-NFLFAGAKEFPTIHHYEKDL------AIPRFE 331 + + Y + + L + T F G ++ + Y+K + + Sbjct: 288 AAAGSDYLKNCTMSATFPLDVRPGTKAGFTFFFGPLKYNMLRAYDKGMKAEDNLDLDHLV 347 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 L + + + ++ N+G+ I+L T+ +KLL PLA K Y+S+A M+ Sbjct: 348 YLGASIFRWINRYMIIPASTFLQQYFSNWGLIILLLTLGIKLLISPLAYKGYLSSAKMRL 407 Query: 392 IQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 ++P++ E+ K+ Q A + LY+ P++GC P+LLQ P A+Y Sbjct: 408 LRPQVQEINAKYPGKDQESMMKRQSATMNLYRAAGAGPMSGCLPMLLQFPFLIAMYMYFP 467 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 ++++R + W +DL++ D +T L HV ++ ++MS+S + ++ + Sbjct: 468 TTIDIRQQS-FLWAEDLSSYDAVFSWTADIPL-LSQFYGNHVSLFCLLMSISNILYIRYT 525 Query: 509 PPPADKGQ--AMILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +D GQ +L WMP V+F+F + +GL Y+ S++I+++Q + + Sbjct: 526 MNQSDTGQEGMAMLKWMPYITTVMFLFFFNQNASGLCYYYFLSSIITVIQ-YMSSRFIIN 584 Query: 563 EIGLIDRLRSTFSKNYNS 580 E L+ +L + +K Sbjct: 585 EEKLMAKLEANKTKPRKK 602 >gi|195942021|ref|ZP_03087403.1| putative inner membrane protein translocase component YidC [Borrelia burgdorferi 80a] gi|226321073|ref|ZP_03796615.1| inner membrane protein OxaA [Borrelia burgdorferi 29805] gi|226233483|gb|EEH32222.1| inner membrane protein OxaA [Borrelia burgdorferi 29805] Length = 544 Score = 190 bits (483), Expect = 4e-46, Method: Composition-based stats. Identities = 115/571 (20%), Positives = 230/571 (40%), Gaps = 47/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTV-KQPNQVDNSYAAVLID 59 M ++ + LS+ ++ + ++++ + + D++ + + Sbjct: 1 MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKS 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + S + ++ + + + L L+ + ++ L++ Sbjct: 61 NSFNLIDKSQDIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F + L N + + + + Sbjct: 118 FFDISFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167 Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + VT N ++ F I + + ++ +Q + KY Sbjct: 168 YLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + W+G S KY+ + + + +FK + + Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGTLKSFIIN------NV 273 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350 K+I+ F++AG K+ + ++K F M ++ ++Y I PM M+M Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVM 333 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KF + P+ Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKF-KHDPKK 392 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469 L + M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525 F Y + + I P IM + +S K Q L + MP+ Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F F L + P+GL+IYW +N+ +I+QQ + Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYL 539 >gi|219684221|ref|ZP_03539165.1| inner membrane protein OxaA [Borrelia garinii PBr] gi|219672210|gb|EED29263.1| inner membrane protein OxaA [Borrelia garinii PBr] Length = 544 Score = 190 bits (483), Expect = 4e-46, Method: Composition-based stats. Identities = 118/568 (20%), Positives = 224/568 (39%), Gaps = 41/568 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M ++ + LS+ ++ + ++ + + + N+ + L Sbjct: 1 MNQSKRILRTVYLSLFLIGLFMLINDIFSSSMLSFKSSDKEVQFDLNKSFDDNEIFLSKS 60 Query: 61 RA-QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + ++ S + ++ + + L L+ + ++ L++ Sbjct: 61 NSFDLINKSQNIVVETEIYFATFSTFRGNLVSLKLKNH---LNLEKDPTDLINVDYKNET 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F ++ L L + + + + E Sbjct: 118 FF----------DVSLDYLVEDLFLYKKIDDFNHEFKAYFKNHGKTYEYVKKYTFSEKNE 167 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + + TV NS+D + + + K Sbjct: 168 YLMKFTVIVNSLDDYNLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGK 227 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 +S + W+G S KY+ + + +FK + + Sbjct: 228 DGLS--IHNPRWIGSSTKYFEVLV---SRENMEVEFKKERGILKSFIVN------NVRNK 276 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLMSYF 353 K+I+ F++AG K+ + ++K F M ++ +Y I PM M+M F Sbjct: 277 KNISDEFFIYAGPKDNRYLDIFDKSGDNTFGLSDIAFGMSVEKSLWYLIQVPMQMVMQVF 336 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y ++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KF + P+ L + Sbjct: 337 YGVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKF-KHDPKKLNE 395 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472 M +LYK +NPL GC+PI+LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 396 EMGRLYKEEGVNPLGGCFPIILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVY 455 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVFV 528 F Y + + I P IM + +S K Q L + MP++F Sbjct: 456 HFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNLDLKNLGAQQKFLYFGMPIMFF 511 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 F L + P+GL+IYW +N+ +I+QQ I Sbjct: 512 FILYNMPSGLLIYWITTNIFTILQQYYI 539 >gi|225620456|ref|YP_002721713.1| putative inner membrane protein [Brachyspira hyodysenteriae WA1] gi|225215275|gb|ACN84009.1| putative inner membrane protein [Brachyspira hyodysenteriae WA1] Length = 624 Score = 190 bits (483), Expect = 4e-46, Method: Composition-based stats. Identities = 112/615 (18%), Positives = 231/615 (37%), Gaps = 60/615 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNE----------RKNIQTVKQPNQVD 50 M N +AI LS II++ + + N+ NI + Sbjct: 1 MSNNKRMVIAIGLSAIIMFLYMFYQAKTMKPVYNSNVSTNSNAVSNNNNITSENILLNTA 60 Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY-HLDVSSNSPIVT 109 I++ ++ + ++ L+N +I + K L+ Y D+ +++ Sbjct: 61 QMQKIEKIENTNAVINDNEKI-LENEYVIATF--KNGSLYSYKLKNYYPQDLGADATNEI 117 Query: 110 LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFE 169 + + +N N + LI + + N + + Sbjct: 118 IDMVEQVYEGIYPFTVTFQNLSNSIAIPENLDYQLIEESGDKVSYSANAIIDNTEVKITK 177 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 ++ Y K + N + + T+ ++E Sbjct: 178 TFTFGEDPYQLKNSVNIENVGEKDLSLFYSYFLATGIGPYRTDKNAIREDATKAQYLIKG 237 Query: 230 VEQ-------------------------KYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 + K + + + + W+ ++++Y+A + Sbjct: 238 NGKSKILLTGDIVKDNIFSRLFGFGNSSKGIKTNQMRYAIYEGEDKWVALNNRYFAIISS 297 Query: 265 PSKETSFHSQFK-----YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 P++ + + ++ + ++ TI G SIT +F G K T Sbjct: 298 PAQSNNTVFETMTFSKPSTNEYRNDFHVANLMSKHTIKSGSSITDNYSVFMGPKVRRTFS 357 Query: 320 HY-EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 Y ++ F+ + + ++++ YN+ N+ AI+L T KL+ FPL Sbjct: 358 KYYLEESYESIFQESFLGLNLRPLTYILDVILNALYNITKNYAWAILLFTFLFKLVTFPL 417 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 Y S M+ + PKI+ +RE++K +P + L ++ +YK INPL GC P+LL P Sbjct: 418 NHASYKSMKKMQLVNPKIERIREQYKDNPDK-LNAEIMAIYKKEKINPLGGCLPMLLPFP 476 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 + A + ++ +E+R+ P + WI DL++ D +F + ++PI+M+ Sbjct: 477 LLIAFFYLMQSMVELRNTP-FLWITDLSSPDKLFVFPAGIPILGGFN----FNLFPIVMA 531 Query: 499 LSMFIQMKMSPPPADKG-----QAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 L+ ++ MK+ P + Q ++ P++ + +F +GL +YW+ N+ + Q Sbjct: 532 LTSYLSMKLQPSSSAGNSSAAAQMKMMTTIFPLMMLLMFYNFASGLALYWTAQNIFGVAQ 591 Query: 553 QAV---IMKMHGAEI 564 Q + I K + EI Sbjct: 592 QFITSKIDKSNTNEI 606 >gi|218670937|ref|ZP_03520608.1| putative inner membrane protein translocase component YidC [Rhizobium etli GR56] Length = 139 Score = 190 bits (482), Expect = 5e-46, Method: Composition-based stats. Identities = 79/134 (58%), Positives = 106/134 (79%) Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 YKVI I++EMRHAPF+GWI+DL+A DPT I LFG+LPF P +H+G+WP+IM ++MF+ Sbjct: 1 YKVIYITIEMRHAPFFGWIQDLSAPDPTTIVNLFGLLPFEAPALLHLGVWPLIMGVTMFV 60 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 QM+M+P P D QAMI NWMP+VF F L+SFPAGL+IYW+W+N +S++QQ+VIM+ HG Sbjct: 61 QMRMNPTPPDPTQAMIFNWMPLVFTFMLASFPAGLVIYWAWNNTLSVLQQSVIMRRHGVR 120 Query: 564 IGLIDRLRSTFSKN 577 I L D L+ F + Sbjct: 121 IELFDNLKGLFRRK 134 >gi|224532140|ref|ZP_03672772.1| inner membrane protein OxaA [Borrelia valaisiana VS116] gi|224511605|gb|EEF82011.1| inner membrane protein OxaA [Borrelia valaisiana VS116] Length = 544 Score = 190 bits (482), Expect = 5e-46, Method: Composition-based stats. Identities = 117/571 (20%), Positives = 229/571 (40%), Gaps = 47/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQN--FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M ++ + LS+ ++ + +PR+ + K +Q D+ + Sbjct: 1 MNQSKRILRTVYLSLFLIGLFMLINDIFFPRMLNLKPSDKEVQ-FDLNKSFDDDEMFLSK 59 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + S + ++ + + + L L+ + ++ L++ Sbjct: 60 SNNINLIDKSQDIVVETGIYVATFSTFRGNLVSLKLKNH---LNLEKDPTDLINVDYKNE 116 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 +F + ++ +R I ++ Sbjct: 117 TFFDVSFDYLVED---------LFLYKKIDDFNHEFKAYFKNNGKTYEYIKRYIFSKKNE 167 Query: 179 LFKIVDTVTNNSIDQIRFSPRGR--IMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 N+ D F I + + ++ +Q + KY Sbjct: 168 YLMKFKVTVNDLEDYNLFDIDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGK 227 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + W+G S KY+ + + + +F+ + + N Sbjct: 228 DGLK-----INNPRWIGSSTKYFEVLIF---KENMEVEFRKEKEILKSFIVNNVGN---- 275 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350 K+I+ F++AG K+ + ++K+ F M ++ ++ I PM M+M Sbjct: 276 --KKNISDEFFIYAGPKDNRYLDIFDKNGDNTFGLSDIAFGMSVEKSLWHLIQVPMQMVM 333 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 FY+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KF + P+ Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKF-KHDPKK 392 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469 L + M +LYK +NPL GC+P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 393 LNEEMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525 F Y + + I P IM + +S K Q L + MP+ Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNIDLKNLGAQQKFLYFGMPI 508 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F F L + P+GL++YW +N+ +I+QQ I Sbjct: 509 MFFFILYNMPSGLLVYWITTNIFTILQQYYI 539 >gi|299137229|ref|ZP_07030411.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX8] gi|298600634|gb|EFI56790.1| membrane protein insertase, YidC/Oxa1 family [Acidobacterium sp. MP5ACTX8] Length = 561 Score = 190 bits (482), Expect = 5e-46, Method: Composition-based stats. Identities = 106/565 (18%), Positives = 212/565 (37%), Gaps = 55/565 (9%) Query: 3 RNWNYFVAIALSVII-VYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 +N + +A++L + + Q F +E + + P + AA + Sbjct: 14 QNVHTILALSLVFFLALLGVQAFQQKKPVESKSKP----SSTVIPAAPNTLVAAAQANQE 69 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + S + ++N + +G Q L+ Y S P+ + + + + Y Sbjct: 70 SMKASSESEIIVENKFYRIRFSNRGGQVLSWILKQY--TDDSGKPLDLVNQRAASLHGY- 126 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 L + + + ++ S L + + + +T + D+ Y+ Sbjct: 127 -PLSLYTQKAGLTKQLAEALYEPSSSGRLVAPGKLTFTYSEGGVSVI-KTFTFDQSYIVG 184 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 VT++ + T + + ++ Sbjct: 185 ADILVTDHG-----MPVAASLCWPSGLGDQETLQNYNVDGRFDASLNGKFVSQTVKSITT 239 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHS-------QFKYLSDGHARYQAKFSANEI 294 S + G+SD Y+A++F+P T + + + Sbjct: 240 GVVQAGSYDYAGVSDLYFAAIFLPEHSTKTTVLNLRNEISIPRTNGQTHSALSDVVSVPG 299 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEK-----DLAIPRFEMLIDWGWFYFIAKPMFML 349 + LFAG K + L P E L+ +G +AKP+F+ Sbjct: 300 VAVGNGEGHIRLRLFAGPKAIELLSSVHALAPDGSLTGPDLEPLVRFGLLRIVAKPLFLA 359 Query: 350 MSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +++ + +LV ++G AI++ T+F+ L+ P K S M++IQP+I+ +R +FK Sbjct: 360 LNWIHVHLVHSWGWAILILTLFINLVLMPTRIKSMRSQLKMQHIQPQINAIRARFKDCKM 419 Query: 409 Q-----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 + K + L K IN G P+LLQ+P+ + Y+++ +E+RHA + W+ Sbjct: 420 GDPHLLEMNKEIFDLQKKEGINVFGGMLPLLLQMPLLYGFYRMLQNVIELRHAEW-LWLH 478 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL-N 521 DL++ DP + + P+ ++MF+ ++P D Q ++ Sbjct: 479 DLSSLDPLH-------------------VLPVFFVVTMFLLQLLTPSSGTDPVQRKMMAL 519 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSN 546 +PV+ F AGL +YWS+ N Sbjct: 520 VLPVLGFFMTWKVGAGLALYWSFGN 544 >gi|300776109|ref|ZP_07085968.1| inner membrane protein OxaA [Chryseobacterium gleum ATCC 35910] gi|300505242|gb|EFK36381.1| inner membrane protein OxaA [Chryseobacterium gleum ATCC 35910] Length = 599 Score = 189 bits (480), Expect = 9e-46, Method: Composition-based stats. Identities = 105/593 (17%), Positives = 226/593 (38%), Gaps = 35/593 (5%) Query: 1 MERN----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N ++ A+ ++++ + ++ + +E + + +T + N V + A Sbjct: 1 MQQNNGIDKKQMISFAVLCLVLFGFMFYFQNKQAKEAELKAQEQKTEQAKNAVKQTQATN 60 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHL---DVSSNSPIVTLLSP 113 + + + L N L + G Q + L Y + + L++ Sbjct: 61 INPNVTPNAIQTA--SLGNNELKLEFSSLGGQVSKVELLKYKAYNHKTDNADQPLYLITK 118 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 +N+ + + T N +L S + + N + + + Sbjct: 119 NNSNYGFQFKDKTGKTVNTKDLVFS-----------PAVNGNAVTLTADYNGAVIQFIYT 167 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 L Y S + Q + + Sbjct: 168 LLPKYTLDFKVRTQGLSKITSDNKADFIWDYNVRNLEKGRAQEQSHSEFSYAFNNYKDYD 227 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 Y E+ +W+G+ ++++SV + S+ + Y KF+ Sbjct: 228 YDGRTTMDEEK--ETLNWIGVKQQFFSSVIEAKNGFT-QSKGNQENVEEGEYLKKFNYEG 284 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + G + + + P + Y+K+ F+ ++ GW + A + M + Sbjct: 285 FVQMTGSELNQDFTWYFMPLDLPLLKSYDKN-----FDEILPLGWSFIGAMNRYFFMWLY 339 Query: 354 YN---LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 + G I + T+ VKL+ P+ KQ+ +A MK I+P+IDE+ KFK + P Sbjct: 340 SIIAAWGLSAGWVIFVMTIIVKLILSPIMYKQHKLSAMMKVIRPEIDEVNAKFKDADPMK 399 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 Q+A +++Y+ +N +AGC P L+QIP+F+A+++ +++R + + KDL A D Sbjct: 400 KQQATMEVYRKAGVNQMAGCLPALVQIPIFYALFRFFPNFIDLRGQG-FWFAKDLTAYDD 458 Query: 471 TNI--FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV 528 F + + + I +I ++ M+ +++ P+ F+ Sbjct: 459 LIKLPFKVPFLGDHLSIFALACTIVILIYTVMTSGNMQQPQQEGMPNMKVLMYIFPITFL 518 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 F L++ +GL Y+ SN I+I+ VI + E + +++S + ++ Sbjct: 519 FFLNTSASGLSWYYFVSNAINILIILVIKYVILDEKKIHAQIQSN-KEKPKAE 570 >gi|291514659|emb|CBK63869.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Alistipes shahii WAL 8301] Length = 648 Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats. Identities = 109/625 (17%), Positives = 231/625 (36%), Gaps = 61/625 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPN------------- 47 M+ + IA+ ++ + F + E + + V Sbjct: 1 MD--KKSIIGIAVVAVLFLGFAYFNSQQQKEYLEQKAAYEAYVDSVAAAARAAAPVADSL 58 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVE------------------LKNPSLIGSINLKGAQF 89 N A + A A +VE ++N + + +G Q Sbjct: 59 ASGNGVQAEVAAAEAAAAVRERQVETLGESLTAAREAEAEEFIVENDVMAVLFSTRGGQI 118 Query: 90 DDLNLRGYHLDV--SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147 + L+ Y + ++ P+ + L + + + G Sbjct: 119 KGVTLKDYTQYGPRGKRDRKIEMMDPATARFGLSFYLKNGLKNVPVNTLDYVFTAQPVVG 178 Query: 148 KILTPTTP-IKLVFKNANNILFERTIS----LDEHYLFKIVDTVTNNSIDQIRFSPRGRI 202 + + ++L + + I + YL + N + + + Sbjct: 179 EADGAKSVVMRLPVAEGAYLEYRYLIYDTAAPERDYLVDFDVRLVNMAPEMANQTQIQID 238 Query: 203 MRHKPQTATNTFGVQEGFIAVLGDKSLVE--QKYSDIEKSSISNFHESNSWLGISDKYWA 260 + F + + + ++ E + N +W+ ++++ Sbjct: 239 WANTTFQNEKGFQNENMYTTLSYRFPDETSIEELGMSEGAKSKNISTQVNWVAFKQQFFS 298 Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 SVFI S+ + + + F+A ++ + G ++ + Sbjct: 299 SVFIAPDNVSYANLAFDTAAPESSLLKTFTAQMGVPYTPQTEGYDFAFYFGPNKYSILKK 358 Query: 321 YEKDLA----IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + R L + + + + + N +G+FGI I + + VKL+ Sbjct: 359 IGEPGGADIYLERLVPLGWGIFGWVNRWCVIPVFDFLRNYIGSFGIIIFILVLLVKLVIS 418 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILL 435 PL K YVS A M+ ++P+IDEL +K+ + Q+A ++LYK INP+ GC P+L+ Sbjct: 419 PLTYKSYVSMAKMRLVKPQIDELAKKYPKPEDAMKKQQATMELYKKAGINPMGGCIPMLI 478 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+P+ A+++ S+E+R P + W DL++ D +I L +PFY HV ++ + Sbjct: 479 QMPILIAMFRFFPASIELREQP-FLWADDLSSYD--SIVNLPFSIPFYG---DHVSLFAL 532 Query: 496 IMSLSMFIQMKMSPPPADKGQAMI--LNWMPVVF-----VFALSSFPAGLIIYWSWSNVI 548 +M++S+F + Q + + +M V +F +S+ +GL Y+ SN+ Sbjct: 533 LMAVSLFGYSWFNYQQTASSQPQMAGMKFMMVYMMPIMMLFWFNSYSSGLCYYYLLSNIF 592 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRST 573 +I Q VI + + + +++ Sbjct: 593 TIGQTLVI-RRMVDDNKIHAIMQAN 616 >gi|219685168|ref|ZP_03539988.1| inner membrane protein OxaA [Borrelia garinii Far04] gi|219673264|gb|EED30283.1| inner membrane protein OxaA [Borrelia garinii Far04] Length = 544 Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats. Identities = 114/568 (20%), Positives = 223/568 (39%), Gaps = 41/568 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M ++ + LS+ ++ + ++ + + + NQ + L Sbjct: 1 MNQSKRILRTVYLSLFLIGLFMLINDIFSSSMLSFKSSDKEVQFDLNQSFDDNEMFLSKS 60 Query: 61 RA-QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + ++ S + ++ + + L L+ + ++ L++ Sbjct: 61 NSFDLINKSQNIVVETEIYFATFSTFRGNLVSLKLKKH---LNLEKDPTDLINVDYKNET 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F + ++ ++ +++ Sbjct: 118 FFDVSLDYLVED---------LFLYKKIDDFNHEFKAYFKNHGKTYEYIKKYTFSEKNEY 168 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + NN D F + + + + S + + ++ Sbjct: 169 LMKFTVIVNNLDDYNLFDIDSYKIVFSSEIER---LSDKAKLQYNNYLSQIIYYDNKLKY 225 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + W+G S KY+ + + +FK + N Sbjct: 226 GKDGLSIHNPRWIGSSTKYFEVLV---SRENMEVEFKKERGILKSFIVNNVGN------K 276 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLMSYF 353 K+I+ F++AG K+ + ++K F M ++ +Y I PM M+M F Sbjct: 277 KNISDEFFIYAGPKDNRYLDIFDKSGDNTFGLSDIAFGMSVEKSLWYLIQVPMQMVMQVF 336 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y ++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KF + P+ L + Sbjct: 337 YGVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKF-KHDPKKLNE 395 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472 M +LYK +NPL GC+P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 396 EMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVY 455 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVFV 528 F Y + + I P IM + +S K Q L + MP++F Sbjct: 456 HFGYK----LYFVSWTDIRILPFIMMFTQLGSTIISSNLDLKNLGAQQKFLYFGMPIMFF 511 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 F L + P+GL+IYW +N+ +I+QQ I Sbjct: 512 FILYNMPSGLLIYWITTNIFTILQQYYI 539 >gi|288818681|ref|YP_003433029.1| inner membrane protein [Hydrogenobacter thermophilus TK-6] gi|288788081|dbj|BAI69828.1| inner membrane protein [Hydrogenobacter thermophilus TK-6] gi|308752269|gb|ADO45752.1| membrane protein insertase, YidC/Oxa1 family [Hydrogenobacter thermophilus TK-6] Length = 501 Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats. Identities = 116/563 (20%), Positives = 222/563 (39%), Gaps = 89/563 (15%) Query: 1 MERN----WNYFVAIALSVIIVYA---WQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53 ME+N F + + ++++ + ++ I + +R+ +Q+ Q Sbjct: 1 MEKNEIDVKRLFALMLVVTLLMFGLELYTYYFSPKEIPQKAVKREEVQSFPQ-------- 52 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 +++ ++ ++L+G + L + Y D+ +++ Sbjct: 53 --LMLGSMRESKKPVQIQAFDFRQFTLLVSLEGGKIVKLVDKKYSYDLITDTERKL---- 106 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 N Y E+ + + +L + I + + + + L +R Sbjct: 107 ----NVYPLEVYTGNPDLDQKLNFAPYQITREGD-------SIVMTYTDGSISLTKRLTY 155 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 + ++ I ++ ++ V E Sbjct: 156 EEGYFKLSI----------------------------SSKGLPSPLYVVVGSHPKGDEFY 187 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 SI E I + + S I FK + Sbjct: 188 THSGPVLSIGGKVERLDVGSIKGREFLSGDISFAGEESRYYFKGFVGKIPSVLIYKVGED 247 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 L ++ +AGAKE+ + +ID+G + KP+F+ M + Sbjct: 248 KDSLTLVEVSNPLIFYAGAKEYSRLKKI-------GLSDVIDYGTLKILVKPLFIFMYWI 300 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y + ++ +I+ T+ V++ FPL K +S + + PK+ E+REK+K+ P ++ Q+ Sbjct: 301 YEHLRSWVFSILALTLLVRVFMFPLTYKSTISMMKLSELAPKVQEIREKYKEDPTKM-QE 359 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 M++LY NP++GC P++LQIPVFFA+YKV++I+ +++ A WI L+ DP Sbjct: 360 EMMKLYSQVGFNPMSGCLPMILQIPVFFALYKVLTITADLQLAS-MLWIPSLSHKDPYY- 417 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 I PIIM L+M Q +SP P DK Q ++ V F F +S Sbjct: 418 ------------------ILPIIMGLTMIAQQFISPNP-DKTQNFMMYVSSVAFTFLFAS 458 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 FPAGL++YW+++N+ ++ Q +I Sbjct: 459 FPAGLVLYWTFNNIFNMGQSYLI 481 >gi|225552387|ref|ZP_03773327.1| inner membrane protein OxaA [Borrelia sp. SV1] gi|225371385|gb|EEH00815.1| inner membrane protein OxaA [Borrelia sp. SV1] Length = 544 Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats. Identities = 113/571 (19%), Positives = 227/571 (39%), Gaps = 47/571 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M ++ + LS+ ++ + +++ + + N+ + + Sbjct: 1 MNQSRKILRTVYLSLFLIGLFMLINDIFSSNILSSRSSDKEVQFDLNKSFDDNEMFSVKS 60 Query: 61 RAQA-LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 ++ S + ++ + + + L L+ + ++ L++ Sbjct: 61 NGFNLINKSQYIVVETGIYVATFSTFKGNLVSLKLKNH---LNLEKNPTDLINIDRKNET 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F + L N + + + + Sbjct: 118 FFEVSFDYFVDDLF----------LYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDE 167 Query: 180 FKIVDTVTNNSIDQIR---FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + VT N ++ F I + + ++ +Q + KY Sbjct: 168 YLMKFKVTVNGLEDYDLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKY-- 225 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 + W+G S KY+ + + + +FK + + Sbjct: 226 ---GKDGLRINNPRWIGSSTKYFGVLV---SKENMEVEFKKERGILKSFIVN------NV 273 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLM 350 K+I+ F++AG K+ + ++ F M ++ +++ I PM M+M Sbjct: 274 RNKKNISDEFFIYAGPKDNRYLDVFDNRGDNTFGLFDIFFGMSVEKSFWHLIQVPMQMVM 333 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 FY+++ N+G++I+ T+ V++L FPL K + +TA + +QP++ EL+ KF + P+ Sbjct: 334 QVFYDVIPNWGLSIIFLTIVVRVLIFPLTFKGFRATAELSKLQPRMKELQVKF-KHDPKK 392 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAAD 469 L + M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 393 LNEEMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGD 452 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPV 525 F Y + + I P IM + +S K Q L + MP+ Sbjct: 453 SVYHFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQKFLYFGMPI 508 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F F L + P+GL+IYW +N+ +I+QQ I Sbjct: 509 MFFFILYNMPSGLLIYWITTNIFTILQQYYI 539 >gi|51598696|ref|YP_072884.1| putative inner membrane protein translocase component YidC [Borrelia garinii PBi] gi|81691561|sp|Q661H9|OXAA_BORGA RecName: Full=Inner membrane protein oxaA gi|51573267|gb|AAU07292.1| inner membrane protein [Borrelia garinii PBi] Length = 544 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 117/568 (20%), Positives = 224/568 (39%), Gaps = 41/568 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M ++ + LS+ ++ + ++ + + + N+ + L Sbjct: 1 MNQSKKILRTVYLSLFLIGLFMLINDIFSSIMLSFKSSDKEVQFDLNKSFDDNEIFLSKS 60 Query: 61 RA-QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 ++ S + ++ + + L L+ + ++ L++ Sbjct: 61 NGFDLINKSQNIVVETEIYFATFSTFRGNLVSLKLKNH---LNLEKDPTDLINVDYKNET 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F ++ L L + + + + E Sbjct: 118 FF----------DVSLDYLVEDLFLYKKIDNLNHEFKAYFKNHGKIYEYVKKYTFSEKNE 167 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + + TV NS++ + + + K Sbjct: 168 YLMKFTVIVNSLNDYDLFDIDSYKIVFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGK 227 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 +S + W+G S KY+ + + +FK + N Sbjct: 228 DGLSINNPR--WIGSSTKYFEVLI---SRENMEVEFKKERGVLKSFIVNNVGN------K 276 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLMSYF 353 K+I+ F++AG K+ + ++K F M ++ +Y I PM M+M F Sbjct: 277 KNISDEFFIYAGPKDNRYLDIFDKSGDNTFGLSDIAFGMSVEKSLWYLIQVPMQMVMQVF 336 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KF + P+ L + Sbjct: 337 YDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKF-KHDPKKLNE 395 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472 M +LYK +NPL GC+P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 396 EMGRLYKEEGVNPLGGCFPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVY 455 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVFV 528 F Y + + I P IM + +S K Q L + MP++F Sbjct: 456 NFGYR----LYFVSWTDIRILPFIMMFTQLGSTIVSSNLDLKNLGAQQKFLYFGMPIMFF 511 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 F L + P+GL+IYW +N+ +I+QQ I Sbjct: 512 FILYNMPSGLLIYWITTNIFTILQQYYI 539 >gi|224534702|ref|ZP_03675274.1| inner membrane protein OxaA [Borrelia spielmanii A14S] gi|224513950|gb|EEF84272.1| inner membrane protein OxaA [Borrelia spielmanii A14S] Length = 544 Score = 187 bits (473), Expect = 6e-45, Method: Composition-based stats. Identities = 114/568 (20%), Positives = 220/568 (38%), Gaps = 41/568 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M ++ A+ LS+ ++ + +++ ++ + L Sbjct: 1 MNQSKRILRAVYLSLFLIGLFMLINDVFSSRMLSSNSSEKDLNFDLSKNFDDNKLFLSKS 60 Query: 61 RAQA-LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + S + ++ + + L L+ + ++ L++ Sbjct: 61 NNFNLIDKSQDIVVETGIYCATFSTFRGNLVSLKLKNH---LNLEKTPTDLINVDYENEP 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F ++ L N + + + + Sbjct: 118 FF----------DVSFDYLVEDLFLYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKNE 167 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + I VT N ++ + + + K Sbjct: 168 YLIKFEVTVNGLEGYDLFNIDSYKIVFGSQIERLSDKAKLQYNNYLSQIIYYDNKLKYGK 227 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 +S + W+G S KY+ + + + +FK + N+ I Sbjct: 228 DGLSINNPK--WIGSSTKYFEVLL---SKENMEIEFKKEKGILKSFIVNNVINKKNIND- 281 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLMSYF 353 F++AG K+ + ++K+ A F M ++ ++ I PM ++M F Sbjct: 282 -----KFFIYAGPKDNRYLDIFDKNDANTFGLSDSAFGMSVEKSLWHLIQVPMQIVMQVF 336 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KF + P+ L + Sbjct: 337 YDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKF-KHDPKKLNE 395 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472 M +LYK +NPL GC P++LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 396 EMGRLYKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGANFIPGWIDDLSIGDSVY 455 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVFV 528 F Y + + I P IM + +S K Q L + MP++F Sbjct: 456 HFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNIDLKNLGAQQKFLYFGMPIMFF 511 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 F L + P+GL+IYW +N+ +I+QQ I Sbjct: 512 FILYNMPSGLLIYWITTNIFTILQQYYI 539 >gi|297621235|ref|YP_003709372.1| inner membrane protein translocase component YidC [Waddlia chondrophila WSU 86-1044] gi|297376536|gb|ADI38366.1| inner membrane protein translocase component YidC [Waddlia chondrophila WSU 86-1044] Length = 822 Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats. Identities = 112/591 (18%), Positives = 208/591 (35%), Gaps = 83/591 (14%) Query: 51 NSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR--------------G 96 + + Q L+N + G ++NL Sbjct: 220 ATETKKPMVPELQQEVEEAYYVLENDYQQLVFSTTGGALVEINLPFETGENQKSVVKEIE 279 Query: 97 YHLDVSSNSPI------------------VTLLSPSNTKNAYFAELDYVSTANNIELPNS 138 + ++ P + + Y+ L + Sbjct: 280 FDKEIEEQHPYDARFPLQSYYTPGESPTGPFVENSKGRLGGYYPLLRRDLIQKGAKPSIQ 339 Query: 139 NTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDT----------VTN 188 N + L ++ + + ++ I + N Sbjct: 340 VLPENYALNIVSKYPEIATLPYRVTHFDKNKIVFEASQNNRKIIKTYSFDEQKNAPYIVN 399 Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES 248 SI S + P + L + VE D K S++ Sbjct: 400 LSITVEGDSRGLWLTTGVPDVEWISNAPAPALKYRLTRQGKVEVNNLDKPKDSLTMSTVV 459 Query: 249 NSWLGISDKYWASVFIPS------------KETSFHSQFKYLSDGHARYQAKFSANEITI 296 W+ S+ ++ + P S+ + + + R+QA + + Sbjct: 460 PDWICNSNGFFGIILDPLSPIDDGLRVLHIDGEEMPSRLVLVGEEYDRFQASKLPGYLMM 519 Query: 297 LPGKS--ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG-----------WFYFIA 343 LP S T +FAG T+ + + P D+ + Sbjct: 520 LPLNSKGGTMNFRIFAGPFGDKTLTTVDHLYSNPETGYNPDYKGSQTFHGWFSFISAPFS 579 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 K +F+LM +F++L G++GI+I+L T+ ++++ +PL S M+ +QP++ ++EK Sbjct: 580 KFLFVLMKFFHHLTGSWGISIILLTIALRVMLYPLNAWSTKSMLKMQQLQPEVQAIQEKH 639 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWI 462 + P+ Q + LY + +NP++GC+P+L+Q+P ++ ++ + E+R APF GWI Sbjct: 640 -KKDPKKAQLEVTNLYMSRGVNPISGCFPMLIQLPFLIGMFDLLKSTFELRGAPFIPGWI 698 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPADK------- 514 +LAA D + + F F + PI++ + MFIQ + MS P D Sbjct: 699 DNLAAPDVLFSWKTP--IFFIGNQF---HLLPILLGVVMFIQQRTMSNAPKDPNLMTEQQ 753 Query: 515 -GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q + M VF FP+GL IYW S ++ I+QQ + A Sbjct: 754 RQQRTMGTMMTAVFSVMFYHFPSGLNIYWLSSMLLGILQQWWTQRKFKANP 804 >gi|115372258|ref|ZP_01459568.1| inner membrane protein, 60 kDa [Stigmatella aurantiaca DW4/3-1] gi|115370723|gb|EAU69648.1| inner membrane protein, 60 kDa [Stigmatella aurantiaca DW4/3-1] Length = 461 Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 101/425 (23%), Positives = 174/425 (40%), Gaps = 38/425 (8%) Query: 149 ILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208 + + + +R + + V N S + R R Sbjct: 33 QEAGEGTVVFTTRRGPWEVVKRVQWPNAGHELTYTVQVHNTSSQPLTGELRVHHNRAIDP 92 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI--SNFHESNSWLGISDKYWASVFIPS 266 + G V +K F + GI +Y+ S+ P Sbjct: 93 NFEHAPSFFGGVGNQSRAACHVGEKLHKRVPEDEASETFSGPVHYFGIDQQYFLSMLYPL 152 Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH------- 319 + + + F +T+ G+++T + G K+ + Sbjct: 153 EAPREGHCVLTATPTVRQVAVGF---PLTVGAGETVTVRFGGWFGPKDPDLLKPVPSQEV 209 Query: 320 ----HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 P E +D+G + I K + M +F+ + GN+G+AI+L TV VKL+ Sbjct: 210 LSAAGMTAAAWDPTIEETVDFGIWAVICKLLLFFMKWFHAVTGNWGVAIILLTVLVKLVL 269 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 PL K V +K +QPK++E+R+KF + + + +++LY+ +NPL GC P+L+ Sbjct: 270 LPLTYKSMVGMEAVKELQPKMEEIRKKFAE-DRERMNMEVMKLYQQAKVNPLGGCLPLLI 328 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGW-IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 Q+PV+ A++ + S ++ PF+G +DL DPT + P Sbjct: 329 QMPVWIALFTALRNSFDIYWEPFFGPVWRDLTYKDPTY-------------------LLP 369 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + + +SM I KM P D QA I+ W MP++F L +PAGL +Y +N++SI QQ Sbjct: 370 LALGVSMIITQKMQPQMMDAAQARIMIWVMPIIFTLTLLQYPAGLSLYIFTNNLLSIGQQ 429 Query: 554 AVIMK 558 + K Sbjct: 430 WGLRK 434 >gi|111115269|ref|YP_709887.1| putative inner membrane protein translocase component YidC [Borrelia afzelii PKo] gi|216263402|ref|ZP_03435397.1| inner membrane protein OxaA [Borrelia afzelii ACA-1] gi|122956367|sp|Q0SN67|OXAA_BORAP RecName: Full=Inner membrane protein oxaA gi|110890543|gb|ABH01711.1| inner membrane protein [Borrelia afzelii PKo] gi|215980246|gb|EEC21067.1| inner membrane protein OxaA [Borrelia afzelii ACA-1] Length = 544 Score = 184 bits (467), Expect = 3e-44, Method: Composition-based stats. Identities = 111/568 (19%), Positives = 226/568 (39%), Gaps = 41/568 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFY-VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M ++ + LS+ ++ + ++ + D++ + Sbjct: 1 MNQSKRILRTVYLSLFLIGLFMLINDIFSSWMLGSKSSDKELQFDLNKSFDDNKMLLSKS 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + + + + ++ + + L L+ + ++ L++ Sbjct: 61 NNFNLIDKAQDIIVETGIYFATFSTFRGNLVSLKLKNH---LNLEKDPTDLINVDYKNEP 117 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 +F ++ L N + + + + Sbjct: 118 FF----------DVSFDYLVEDLFLYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKNE 167 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + + V N ++ + ++ + + S + + ++ Sbjct: 168 YLMRFEVIVNGLEDY--NLLDIDSYKITFSSQIERLSDKAKLQYNNYLSQIIYYDNKLKY 225 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG 299 + W+G S KY+ + + + +FK + ++ Sbjct: 226 GKDDLRINNPKWIGSSTKYFEVLV---SKENMEVEFKKEKGILKSFIVN------NVINK 276 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAI------PRFEMLIDWGWFYFIAKPMFMLMSYF 353 K+I+ F++AG K+ + ++K+ F M ++ +Y I PM M+M F Sbjct: 277 KNISDKFFIYAGPKDNRYLDIFDKNSDNTFGLSDIAFGMSVEKSLWYLIQVPMQMVMQVF 336 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y+++ N+G++I+ T+ V++L FPL K + +TA + +QPK+ EL+ KF + P+ L + Sbjct: 337 YDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQVKF-KHDPKKLNE 395 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472 M +LYK +NPL GC+PI+LQ+P+FFA+Y +++ +R A F GWI DL+ D Sbjct: 396 EMGRLYKEEGVNPLGGCFPIILQLPIFFALYSLVNNLFLLRGANFIPGWIDDLSIGDSVY 455 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK---GQAMILNW-MPVVFV 528 F Y + + I P IM + +S K Q L + MP++F Sbjct: 456 HFGYK----LYFVSWTDIRILPFIMMFTQLGSTIVSSNIDLKNLGAQQKFLYFGMPIMFF 511 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVI 556 F L + P+GL+IYW +N+ +I+QQ I Sbjct: 512 FILYNMPSGLLIYWITTNIFTILQQYYI 539 >gi|228470855|ref|ZP_04055702.1| putative membrane protein [Porphyromonas uenonis 60-3] gi|228307422|gb|EEK16432.1| putative membrane protein [Porphyromonas uenonis 60-3] Length = 626 Score = 184 bits (465), Expect = 5e-44, Method: Composition-based stats. Identities = 99/573 (17%), Positives = 213/573 (37%), Gaps = 37/573 (6%) Query: 26 VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM-----SPRVELKNPSLIG 80 P + + Q + A D A S + + N L Sbjct: 33 PTPATDTTQVATNAATAPAEEGQTTSDAAKPAPVDSLYAFSQLMAQSAKEYTMSNDKLSV 92 Query: 81 SINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNT 140 + +GA L Y S +S V L +P + F + T N L + Sbjct: 93 TFTTQGAMPVSAELADYK---SYDSTQVRLFAPGD-----FVLNLPIRTNQNQILETKDL 144 Query: 141 VWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY-LFKIVDTVTNNSIDQIRFSPR 199 +W + + T + L +++ + T+ + + I + + Sbjct: 145 IWQ--ASQPNDSTLQMTLPIDSSSYLRIIYTMPHEGYMLGMAIEAQGLGSLLHSNNAMQD 202 Query: 200 GRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYW 259 + P+ + + +K + + + + E W+ + DK++ Sbjct: 203 LEMSLRIPRQELSWKFENQYSTIYYKYPGDDVEKLKETKMTQEKDVREKIQWVAMKDKFF 262 Query: 260 ASVFIPSKE---TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFP 316 ++V I + F + + LF G ++ Sbjct: 263 STVLIGLGDTRLEENKMSFTTEPKETNYIKDCKYQGAFAMDIRDGRKANFALFMGPLDYN 322 Query: 317 TIHHYEKDLAIPRFEMLIDWGWF------YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 + + + + L + + + L+++ + N+GI I+L T+ Sbjct: 323 MLKSIDAGVDKAQRLDLKRMIYVGGSLFRWINVTLIRPLINFLQGFISNWGIIILLLTII 382 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ---KAMIQLYKTHNINPL 427 +KL+ PL K Y+S A M+ ++P+++ + K+ Q++ +A +QLY+ +P+ Sbjct: 383 IKLVLSPLTFKSYLSQAKMRVLKPQVEAINAKYAGDDQQMMMKRSQATMQLYRNAGASPM 442 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 +GC P+LLQ+P A+Y ++++R + W+KDL+ DP ++ L G Sbjct: 443 SGCLPMLLQMPFLIALYMFFPTAIDLRGES-FLWVKDLSTYDPIISWSTDIPFITGLLGG 501 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPVVFVFALSSF----PAGLII 540 H+ ++ ++ +++ I + + A Q ++ +MP + F AGL Sbjct: 502 NHISLFCLLWAVTNIIYSRYTMSMSGGASGSQMKMMRFMPYMMTIMFFIFFNSNAAGLTY 561 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 Y+ S +I+I+Q + ++ E ++ RL+ Sbjct: 562 YYFISTLITILQ-FLASRLLINEDKVLARLQEN 593 >gi|296126151|ref|YP_003633403.1| membrane protein insertase, YidC/Oxa1 family [Brachyspira murdochii DSM 12563] gi|296017967|gb|ADG71204.1| membrane protein insertase, YidC/Oxa1 family [Brachyspira murdochii DSM 12563] Length = 626 Score = 183 bits (464), Expect = 7e-44, Method: Composition-based stats. Identities = 114/608 (18%), Positives = 224/608 (36%), Gaps = 58/608 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQV----------- 49 M N +A AL+ II++ + + ++ N + Sbjct: 1 MSNNKRMVIAFALTAIILFIYMFYQSKVMKPVYSSNTSTNSAAASNNNIENNNNTANYLL 60 Query: 50 -DNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGY-HLDVSSNSPI 107 + + LS++ L+N +I + K L+ Y D+ ++ Sbjct: 61 DTAQMQNFAVIEDTNTLSLNNEKILENEYVIAAF--KNGSLFSYKLKNYYPQDLGKDATN 118 Query: 108 VTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL 167 + + +N N + LIS + L + + Sbjct: 119 EIIDMVEQVYEGIYPFTVTFQNLSNSIAMPENLNYQLISNDNNDLVSYSALALIDNVPVR 178 Query: 168 FERTISL-DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 +T S ++ Y K T+ N + + T+ V+E Sbjct: 179 ITKTFSFGEDPYQLKNSVTIENIGEKDLSLFYSYFLGTGIGPYRTDKNSVREDATKAQYL 238 Query: 227 KSLVEQK-----------------------YSDIEKSSISNFHESNSWLGISDKYW---A 260 + + S + + W ++++Y+ + Sbjct: 239 IKGNGKSKILLTGDIVKDNIFSRLFGSSSRGIKTNQMRYSVYEGLDKWAALNNRYFAIIS 298 Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSA--NEITILPGKSITTTNFLFAGAKEFPTI 318 S P F S R + ++ +I G SIT T +F G K Sbjct: 299 SSAQPDNTVFETMTFSKPSTNEYRNDFHLANLVSKHSIKSGSSITDTYSVFMGPKVRRLF 358 Query: 319 HHYEKDLAIPR-FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 Y + + F+ + + ++++ YN+ N+ AI+L T+ K++ FP Sbjct: 359 SKYYAEESYESIFQESFLGINLRPLTYILDIMLNGLYNITKNYAWAILLFTLLFKIITFP 418 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 L Y S M+ + PKI+ +RE++K +P + L ++ +YK INPL GC P+LL Sbjct: 419 LNNASYKSMKKMQLVNPKIERIREQYKDNPDK-LNAEIMAIYKKEKINPLGGCLPMLLPF 477 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 P+ A + ++ +E+R+ P + WI DL++ D +F + ++PI+M Sbjct: 478 PLLIAFFYLMQSMVELRNTP-FLWITDLSSPDRLFVFPAGMPILGGFN----FNLFPILM 532 Query: 498 SLSMFIQMKMSPPPADKG------QAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISI 550 +++ ++ MK+ P + G Q ++ P++ + +F +GL +YW+ NV + Sbjct: 533 AVTSYLSMKLQPSSSAGGSSSAAAQMKMMTTIFPLIMLLMFYNFASGLALYWTAQNVFGV 592 Query: 551 VQQAVIMK 558 QQ + K Sbjct: 593 AQQFITSK 600 >gi|327540380|gb|EGF26966.1| 60 kDa inner membrane insertion protein [Rhodopirellula baltica WH47] Length = 822 Score = 183 bits (464), Expect = 7e-44, Method: Composition-based stats. Identities = 96/424 (22%), Positives = 177/424 (41%), Gaps = 36/424 (8%) Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 E ++ + +N I R + +K + + ++S Sbjct: 337 ELAYRIEGANGITLEGWWYSNKISPNWGGSAARDIVYKTTAEGHELVSGYALLKRAKNES 396 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY----------- 277 E + + + S++G+ +Y+ +P + F+ Sbjct: 397 --EADDQTLFAPDSAPPARNLSYIGVDAQYFTVAMLPPEGQESLKTFRRAAANIIADPSA 454 Query: 278 ---LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 + + + PG S+ + LFAG K+ + Y I Sbjct: 455 VPDNKERAVNASFYLDSAIADVPPGSSLKQSLRLFAGPKQPDVMEAY-------GLGDCI 507 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 +GWF F+AKP+ L+ F N VGN+ +AI+L T+ V+ L FPL++K ++ M+ + P Sbjct: 508 YYGWFSFVAKPLGGLLHLFSN-VGNYALAIVLLTLCVRGLMFPLSRKAAINAQRMQELAP 566 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 ++ ++ EK K + +A +L + NP+AGC P+ LQ+P+F +Y+ +S+ +E+R Sbjct: 567 ELKKIAEKHKD-DMEARVRAQRELQQRVGFNPMAGCAPMFLQLPIFIGLYRTLSVDIELR 625 Query: 455 HA---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG----IWPIIMSLSMFIQMKM 507 A + W +LAA D + + G +G I P+I+ Q KM Sbjct: 626 QAAFASWTAWASNLAAPDMMYYWGDWMWDYLGGRGTGWLGPYFNILPMIVVSLFLAQQKM 685 Query: 508 SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 PPA Q ++N+M +V PAGL IY+ S++ I ++ ++ K ++ Sbjct: 686 FMPPATDEQTAMTQKMMNYMTLVMGLFFFRVPAGLCIYFITSSLWGIGERILVKKTLPSK 745 Query: 564 IGLI 567 Sbjct: 746 PHFD 749 Score = 40.7 bits (93), Expect = 0.75, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 35/121 (28%), Gaps = 23/121 (19%) Query: 1 MERNWNYFVAIALSVIIVYAWQNF---YVYP-RIEEMNNERKNIQTVKQPNQVDNSYAAV 56 ME F I S+ + + + P EE + +TV+ + A Sbjct: 1 ME--RRLFSFILSSMAFFLIYMSLRTMFAPPLPPEEDAIAEVDGETVEPVEDLVADTDAS 58 Query: 57 LIDDRAQALSMSPRVELKNP-----------------SLIGSINLKGAQFDDLNLRGYHL 99 + + ++ P ++ ++N +G + + L Sbjct: 59 EPGEGDGEEANEDTDAVERPSSPTWSTLGSMDPTSGYVMLVTLNSRGGGIERIELTERKE 118 Query: 100 D 100 + Sbjct: 119 N 119 >gi|32475265|ref|NP_868259.1| 60 kDa inner-membrane protein homolog- part of a protein secretion system [Rhodopirellula baltica SH 1] gi|38502913|sp|Q7UFZ2|OXAA_RHOBA RecName: Full=Inner membrane protein oxaA gi|32445806|emb|CAD78537.1| 60 kDa inner-membrane protein homolog-putative part of a protein secretion system [Rhodopirellula baltica SH 1] Length = 827 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 96/424 (22%), Positives = 177/424 (41%), Gaps = 36/424 (8%) Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 E ++ + +N I R + +K + + ++S Sbjct: 342 ELAYRIEGANGITLEGWWYSNKISPNWGGSAARDIVYKTTAEGHELVSGYALLKRAKNES 401 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY----------- 277 E + + + S++G+ +Y+ +P + F+ Sbjct: 402 --EADDQTLFAPDSAPPARNLSYIGVDAQYFTVAMLPPEGQESLKTFRRAAANIIADPSA 459 Query: 278 ---LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 + + + PG S+ + LFAG K+ + Y I Sbjct: 460 VPDNKERAVNASFYLDSAIADVPPGSSLKQSLRLFAGPKQPDVMEAY-------GLGDCI 512 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 +GWF F+AKP+ L+ F N VGN+ +AI+L T+ V+ L FPL++K ++ M+ + P Sbjct: 513 YYGWFSFVAKPLGGLLHLFSN-VGNYALAIVLLTLCVRGLMFPLSRKAAINAQRMQELAP 571 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 ++ ++ EK K + +A +L + NP+AGC P+ LQ+P+F +Y+ +S+ +E+R Sbjct: 572 ELKKIAEKHKD-DMEARVRAQRELQQRVGFNPMAGCAPMFLQLPIFIGLYRTLSVDIELR 630 Query: 455 HA---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG----IWPIIMSLSMFIQMKM 507 A + W +LAA D + + G +G I P+I+ Q KM Sbjct: 631 QAAFASWTTWASNLAAPDMMYYWGDWMWDYLGGRGTGWLGPYFNILPMIVVSLFLAQQKM 690 Query: 508 SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 PPA Q ++N+M +V PAGL IY+ S++ I ++ ++ K ++ Sbjct: 691 FMPPATDEQTAMTQKMMNYMTLVMGLFFFRVPAGLCIYFITSSLWGIGERILVKKTLPSK 750 Query: 564 IGLI 567 Sbjct: 751 PHFD 754 Score = 40.7 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 13/117 (11%), Positives = 33/117 (28%), Gaps = 21/117 (17%) Query: 5 WNYFVAIALSVIIVYAWQNF---YVYP-RIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 F I S+ + + + P EE + +TV+ + A + Sbjct: 8 RRLFSFILSSMAFFLIYMSLRTMFAPPLPPEEDAIAEVDGETVEPAEDLVADTDASEPGE 67 Query: 61 RAQALSMSPRVELKNP-----------------SLIGSINLKGAQFDDLNLRGYHLD 100 + ++ P ++ ++N +G + + L + Sbjct: 68 GEGEEANEDTDAVERPSSPTWSTLGSMDPTSGYVMLVTLNSRGGGIERIELTERKEN 124 >gi|296121961|ref|YP_003629739.1| 60 kDa inner membrane insertion protein [Planctomyces limnophilus DSM 3776] gi|296014301|gb|ADG67540.1| 60 kDa inner membrane insertion protein [Planctomyces limnophilus DSM 3776] Length = 699 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 137/674 (20%), Positives = 240/674 (35%), Gaps = 111/674 (16%) Query: 2 ERNWNYFVAIALSVIIVYAWQNF-----YVYPRIEEMNNERKNIQTV----------KQP 46 + IALS ++++ W F + P E E+ Sbjct: 1 MEQRRFLTFIALSALVIFGWSGFVMPMLFPPPPKAEKLAEKAPEDQAADIAKPEELQPAD 60 Query: 47 NQVDNSYAAVLIDDRAQALSMSPRVELKNPSLI---------------------GSINLK 85 V + A D Q + + ++ P L +N + Sbjct: 61 ALVPANVIAKAGADANQPEAPAQEKVVEPPKLQSFPNRQILLGSTNPDEPFFLAVKLNSR 120 Query: 86 GAQFDDLNLRG--YHLDVSSNSPIVTLLSPS------------NTKNAYFAELDYVSTAN 131 G + + L Y + +S V ++ + A L Sbjct: 121 GGSIETIELNDPRYR-SLDDSSKPVKVVGDDPLLKLKTTDVTIEAIDRQLAALGLSLAKI 179 Query: 132 NIELPNSNTVWNLISGKILTPTTPIKLVFKN---------ANNILFERTISLDEHYLFKI 182 + E+ + ++ + +P I+L +L + YL Sbjct: 180 DWEVVPGSESPEGVTFRFTSPDGSIQLEKAYRLPKVPGLAGKEPTKTERDNLGQGYLLDY 239 Query: 183 VDTVTNNSIDQIRFSPRGR----IMRHKPQTATNTFGVQEGFI-----AVLGDKSLVEQK 233 TV N + + + + P+ T V+ GF+ +V + Sbjct: 240 SLTVRNLTENPREVRYTMQGPVGVPLENPENVTKYRDVRVGFVLPDGESVESSHQSATEV 299 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD------------- 280 S + ++G+ Y+AS+ P + + + Sbjct: 300 LDAESSGKPSVWTRPIEYVGVDATYFASLVHPVENQIKERTIESVQSQVTYPAQEKHFSD 359 Query: 281 -GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY-EKDLAIPRFEMLIDW-- 336 P T L+AG K + D+ + Sbjct: 360 VSIELTSVPIQLAPQGTGPNAEATHHFQLYAGPKRAHLMAAVGAADVTEYHIGWNPFFFL 419 Query: 337 -GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + PM L++ + L N+GIAI+L T+ V+ PL +KQ S MK +QPK Sbjct: 420 EPLVRLLVIPMLALLNGLHALGINYGIAIILLTIIVRTCLMPLTRKQAQSAQRMKEMQPK 479 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + EL++KF L++A ++LY H NPLAGCWP+LLQ+P+FFA+Y+ +S+S+++R Sbjct: 480 LKELQKKFAG-DADGLRRAQLELYSKHGFNPLAGCWPVLLQMPIFFALYRALSVSVDLRR 538 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPADK 514 A + WI +LAA D +F L +PF G+ + PI+ + Q K + PPPAD+ Sbjct: 539 AS-FLWIDNLAAPD--ALFELPFRVPFL--GWTEFNLLPILTIILFVAQQKILMPPPADE 593 Query: 515 GQAMILNW-----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM---HGAEIGL 566 QA + + M V+ PAGL IY+ S++ + ++ +M + A+ Sbjct: 594 EQA--MQYRMMNIMMVMMGVMFYRVPAGLCIYFITSSLWGMAERWFFDRMNEWYPAKP-- 649 Query: 567 IDRLRSTFSKNYNS 580 + S Sbjct: 650 -----VEVKEKKPS 658 >gi|195953256|ref|YP_002121546.1| 60 kDa inner membrane insertion protein [Hydrogenobaculum sp. Y04AAS1] gi|195932868|gb|ACG57568.1| 60 kDa inner membrane insertion protein [Hydrogenobaculum sp. Y04AAS1] Length = 514 Score = 182 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 109/565 (19%), Positives = 213/565 (37%), Gaps = 75/565 (13%) Query: 1 ME--RNWNYFVAIALSVIIVYAWQN----FYVYPRIEEMNNERKNIQTVKQPNQVD-NSY 53 ME I + A+Q F+ P + + K + Sbjct: 1 MEQIDLKRLIAIFFAVSITILAYQYITEYFFKSPTVTTPQQKAKKTTANQAIFTYQYQGG 60 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 + ++++ Q + V L G + ++ + ++ + + P Sbjct: 61 INLFLNNQRQTQDIQNGVLLHFKDADVKFAYNGGRITYYYIKNFKQNLITPQEYALKVFP 120 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + + + S ++ T ++ NI + IS Sbjct: 121 LEVYTGNPSIDEAI----------------NFSNYNISVTNNNVVMTLKLPNISVVKDIS 164 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 D+ + + T + L + + K Sbjct: 165 FDKEGFISKISVSLIGYNKPYFVMIGNNLNEEDLHTHQGPVFDINENVKRLDNDDIKTYK 224 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + S+ G +++ + + + D F Sbjct: 225 ----------VITGNISFAGEESRFFFQGIKGHINSIQIYKERLGKDDFTFMLVSFDGKA 274 Query: 294 ITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + F G KE+ + ++D+G F + +P+F + + Sbjct: 275 LM-------------FFGPKEYDLLKKA-------NLTDVLDFGDFRIVVEPLFKFLYFI 314 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y GN+ I+I + T+ +++LFFPL K +S + + + PK+++++EK+K P ++ Q+ Sbjct: 315 YIKTGNWIISIFVLTLLIRILFFPLNYKSTLSMSKLSEVAPKMEKIKEKYKDDPVKM-QE 373 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 +++LYK NP +GC PIL+QIP+FF++YKVI I+ +++ A + WI DL DP Sbjct: 374 EIMKLYKEVGFNPASGCLPILVQIPIFFSLYKVIVITADLKLA-HFLWIHDLTQKDPYY- 431 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 I PI+M ++M + ++++P P D Q I+ + FVF +S Sbjct: 432 ------------------ILPILMGITMIMSLRLTPNP-DPRQNSIMYISSLFFVFLFAS 472 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 FPA L+IYW+ +N++S +Q +I K Sbjct: 473 FPAALVIYWTINNILSFLQTYLIRK 497 >gi|153827655|ref|ZP_01980322.1| inner membrane protein OxaA [Vibrio cholerae MZO-2] gi|149737868|gb|EDM52773.1| inner membrane protein OxaA [Vibrio cholerae MZO-2] Length = 175 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 76/190 (40%), Positives = 112/190 (58%), Gaps = 21/190 (11%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 +PL K QY S A M+ +QPK+ +RE+ Q + + M++LYK +NPL GC PIL Sbjct: 1 MYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-DRQRMSQEMMELYKKEKVNPLGGCLPIL 59 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 LQ+P+F A+Y + S+E+RH+PF+GWI DL+A DP I P Sbjct: 60 LQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYY-------------------ILP 100 Query: 495 IIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++M SMF+ KMSP D Q I+ +MPV+F F FP+GL++YW SN+++++QQ Sbjct: 101 LLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQ 160 Query: 554 AVIMKMHGAE 563 +I K + Sbjct: 161 TLIYKALEKK 170 >gi|261749487|ref|YP_003257173.1| putative inner membrane protein translocase component YidC [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497580|gb|ACX84030.1| putative inner membrane protein translocase component YidC [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 604 Score = 179 bits (454), Expect = 9e-43, Method: Composition-based stats. Identities = 107/527 (20%), Positives = 212/527 (40%), Gaps = 28/527 (5%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLRGYHLDV---SSNSPIVTLLSPSNTKNAYFAELDYVS 128 L+N L I+ G D++ L+ Y S++ + L+ S+ ++ Sbjct: 64 VLENEVLRLRISSLGGMIDEVFLKKYKAYDFIHLSHNKNLYLIKDSSFLYKMIFWVNSNK 123 Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNIL--FERTISLDEHYLFKIVDTV 186 + L +N+++ I ++ + + + +L E + + V Sbjct: 124 KHSKKNLITTNSLYFHPFFFQKRGKLIILIMRAHNPYGVGFIDHIYTLSEGAQYHVGFYV 183 Query: 187 TNNSIDQIRFSPRGRIMRHKP----QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 ++ + I + + N S + ++ +KS Sbjct: 184 RTVNLFPFTGNKTISINLEQKVFSLEKDRNWENSYTQVYYSYKKNSHSKIQFLSEKKSEE 243 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 N + +W+ +++A++FIP K + S + I + + Sbjct: 244 KNI-SNLNWVAYKQQFFATIFIPKKPLKDCFIRSENFSSGVFLKKIQSNILLKIKEHEEV 302 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 L+ G +F + + D I + + + N+GI Sbjct: 303 NIPFQLYFGPLDFSLLKKF--DQKIENIIPFGWGFLKWINKYFFLEIFQFLEKTNLNYGI 360 Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 I+L T+ VKL+ P+ KQY +A MK I+P+IDE+ KF+ S P Q+AM++LY+ Sbjct: 361 IIILMTIVVKLILSPITYKQYKLSAMMKLIRPEIDEINNKFRNSDPLKKQRAMMELYQKA 420 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 INP++GC+ L QIP+F++++K + +R + W+ DL + D +I L +PF Sbjct: 421 GINPMSGCFSALFQIPIFYSLFKFFPTLINLRGKS-FLWVDDLTSYD--SILELPFSIPF 477 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMK----------MSPPPADKGQAMILNWMPVVFVFALS 532 Y HV + ++ S ++ + K ++ IL MP++ + ++ Sbjct: 478 YGN---HVSLLTLLYSFALLVYTKLSNNVGSNDTLNNQNNASDMPFILYLMPLIMLLFIN 534 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 S+ +GL +Y+ SN+I+I I K E + +++ K Sbjct: 535 SYASGLSLYYFISNIINIGLIFFIKKFLLDENKIRQKIQENQKKPKK 581 >gi|330447274|ref|ZP_08310924.1| 60Kd inner membrane family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491465|dbj|GAA05421.1| 60Kd inner membrane family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 230 Score = 179 bits (454), Expect = 9e-43, Method: Composition-based stats. Identities = 93/231 (40%), Positives = 139/231 (60%), Gaps = 21/231 (9%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 D+GW FIA P+ L+S + +VGN+G+AI++ T+ V+ L +PL K QY S A M+ + Sbjct: 10 TPDYGWSSFIANPLHDLLSLIHGVVGNWGVAIIILTLIVRGLMYPLTKAQYTSMAKMRML 69 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 QPK+ LRE Q + + M+ LYK INPL GC P+LLQ+P+F A+Y V+++S E Sbjct: 70 QPKLQALRESCGD-DRQRMSQEMMALYKKEQINPLGGCLPLLLQMPIFIALYTVLNLSTE 128 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511 +R+APF+GWI++L+A DP + PI+M +SMF K SP Sbjct: 129 LRNAPFFGWIQNLSAQDPYY-------------------VLPILMGISMFFIQKNSPSTV 169 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 D Q I+ +MPV+F FPAGL++YW SN+++++QQ +I + Sbjct: 170 TDPMQQKIMTFMPVIFTVFFLFFPAGLVLYWLTSNIVTLIQQTIIFRQLEV 220 >gi|294674133|ref|YP_003574749.1| inner-membrane protein, 60 kDa [Prevotella ruminicola 23] gi|294471953|gb|ADE81342.1| inner-membrane protein, 60 kDa [Prevotella ruminicola 23] Length = 587 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 97/534 (18%), Positives = 209/534 (39%), Gaps = 27/534 (5%) Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 A + V LKN + + N KG ++ + + ++ VTL + Sbjct: 34 AALNGKNQPVVLKNDKVELTFNTKGGTLAKAVIKNF--ENLNDQMGVTLFDENT------ 85 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 +++++ + + + + + T + + N +I F + D F Sbjct: 86 QQMNFMLAGKSENIITKDLFFTPS--NVTDSTLTMTALAGNGGSIEFNYVLGKDYMLHFN 143 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 + Q +K+ S+ + Sbjct: 144 MKANGLQGMFAPNYQEMSIEWTDLARQQEKGFTFENRYTSVTYKEKNGGTDYLSETSEKI 203 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT--ILPG 299 N E+ W+ ++++++ I E + +S + K ++ P Sbjct: 204 DENIDEALDWVAFKNQFFSAALIAKDEFAANSLLTSIPQQKGSGYLKQFNAKLKTAFDPT 263 Query: 300 KSITTTNFLFAGAKEFPTIHH------YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYF 353 + T ++ G +F I + KDL + + L W + + + Sbjct: 264 GAKATEFEMYIGPNDFRLIKDVEQQSAFGKDLDLEQLVNLGWWLVRWINRWFTIYVFDWL 323 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-VLQ 412 + + GI ++L T+ +K++ FP+ KK Y+S+A M+ ++PK+DE +++ + Q Q Sbjct: 324 TSWGFSMGIVLILITLLLKVITFPMVKKSYMSSAKMRVLKPKLDEATKQYDKPEDQMKKQ 383 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 +AM+QLY + ++PL GC P+L+Q P++ A++ + ++++R + WI DL+ DP Sbjct: 384 QAMMQLYSQYGVSPLGGCLPMLIQFPIWMAMFFFVPNAIQLRRES-FLWISDLSTYDPII 442 Query: 473 IF--TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM----PVV 526 + ++GI + + ++ S Q + Q ++ WM PV+ Sbjct: 443 EWGTQIWGIGDHLSLTCILFCVANVLYSYMTMRQQRDQMVGQQAEQMKMMQWMMYLMPVM 502 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 F F + + +GL Y+ S S + + + L+ L + + +N N+ Sbjct: 503 FFFMFNDYSSGLNFYYFISLFFSAAIMWTL-RKTTNDEKLLAILEAKYKENKNN 555 >gi|213865390|ref|ZP_03387509.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 425 Score = 177 bits (449), Expect = 4e-42, Method: Composition-based stats. Identities = 91/440 (20%), Positives = 172/440 (39%), Gaps = 33/440 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS- 228 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 229 -LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + K+ I + N W+ + +Y+A+ +IP + + + F + G+ Sbjct: 229 KYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN--FYTANLGNGIVAI 286 Query: 288 KFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + A + + PG++ T+ L+ G + + P ++ +D+GW +FI++P+F Sbjct: 287 GYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLF 341 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QPKI +RE+ Sbjct: 342 KLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDK 401 Query: 408 PQVLQKAMIQLYKTHNINPL 427 Q + M+ LYK +NP Sbjct: 402 -QRQSQEMMALYKAEKVNPW 420 >gi|126643001|ref|YP_001085985.1| hypothetical protein A1S_2980 [Acinetobacter baumannii ATCC 17978] gi|126388885|gb|ABO13383.1| hypothetical protein A1S_2980 [Acinetobacter baumannii ATCC 17978] Length = 164 Score = 177 bits (447), Expect = 6e-42, Method: Composition-based stats. Identities = 62/163 (38%), Positives = 92/163 (56%), Gaps = 19/163 (11%) Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 + ++ + M+ LYK +NPL+GC P+LLQ+P+F A+Y V+ S+E+RHA Sbjct: 8 MQRMKEEFGEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVLMESVELRHA 67 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 P+ GWI+DL+A DP I P+IM +MF Q ++P PAD Q Sbjct: 68 PWLGWIQDLSAMDPWF-------------------ILPLIMGATMFAQQMLNPQPADPMQ 108 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 A + MP++F + FPAGL++YW +N I+I+QQ I K Sbjct: 109 AKVFRIMPIMFTVFMLFFPAGLVLYWIVNNSITILQQWFINKS 151 >gi|218262804|ref|ZP_03477162.1| hypothetical protein PRABACTJOHN_02842 [Parabacteroides johnsonii DSM 18315] gi|218223099|gb|EEC95749.1| hypothetical protein PRABACTJOHN_02842 [Parabacteroides johnsonii DSM 18315] Length = 559 Score = 176 bits (446), Expect = 7e-42, Method: Composition-based stats. Identities = 99/558 (17%), Positives = 215/558 (38%), Gaps = 56/558 (10%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + L +++ + + P E++ +R+ ++ Q ++ Sbjct: 1 MD--KNTIIGFLLIGVVLIVF-TWLNQPTPEQIEAQRRMQDSIAQIEYAKQLEQQKELNR 57 Query: 61 RAQA---------------------------LSMSPRVELKNPSLIGSINLKGAQFDDLN 93 A+A + L+N + + KG + + Sbjct: 58 EAKADDELAGLPDSVRLARLQNTFGVFADAMVGEEGSTVLENELVEVRLANKGGRVGYVR 117 Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ Y + + L ++ + D+ + + N+ ++ + Sbjct: 118 LKKYD---NYKGEPLVLFDEKDS------KFDFTLITADNRVVNTGDLYFTPVKGNDQNS 168 Query: 154 TPIKLVFKNANNILFERTISLDEHY-LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212 ++L +++ F ++ D++ F I T N + + + Q Sbjct: 169 ITMRLNTGEGSHLDFIYSLKPDDYMLQFSIKGTGLNGVLSPGTTALDLLWQQKITQQEKG 228 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 ++ + V + +Y K+ W+ D Y++S+ I E Sbjct: 229 R-KFEDRYATVYYKFMADDVEYLSETKNDSKQLSNRLKWVAYKDMYFSSILIAGNEGFES 287 Query: 273 SQFKYL---SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 + DG + K + + L G T + G +F + Y+ D+ Sbjct: 288 TTIDSKMLPEDGSFLKEYKTTTSVPFDLKGNEAT-DMRFYFGPNQFSLLKSYDDDVEKAD 346 Query: 330 ---FEMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 E ++ GW + + L ++ + ++G+ I L TV VKL+ FPL K Y Sbjct: 347 QLDLEKIVPLGWGIFRWVNQYFVIPLFNFLGQFIHSYGLLIFLLTVIVKLILFPLTYKSY 406 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQIPVFFA 442 +S+A M+ ++P+++EL K+ V ++ A ++LY +P+AGC P+LLQ+P+ A Sbjct: 407 MSSAKMRVLRPQVEELNAKYPGQDKAVERQRATMELYSRAGASPMAGCVPMLLQMPILVA 466 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM-HVGIWPIIMSLSM 501 ++ ++E+RH + W DL+ D + + +P P F H+ ++ ++M+++ Sbjct: 467 LFMFFPSAIELRHQS-FLWAHDLSTYDAIVSWNTY--IPIITPYFGNHISLFCLLMTVTN 523 Query: 502 FIQMKMSPPPADKGQAMI 519 I K + + GQ + Sbjct: 524 IIYTKFNMEQTNTGQQQM 541 >gi|62185087|ref|YP_219872.1| putative inner membrane protein translocase component YidC [Chlamydophila abortus S26/3] gi|62148154|emb|CAH63911.1| putative lipoprotein [Chlamydophila abortus S26/3] Length = 794 Score = 176 bits (446), Expect = 8e-42, Method: Composition-based stats. Identities = 101/476 (21%), Positives = 189/476 (39%), Gaps = 41/476 (8%) Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 + + + N ++ ++ + + ++T + E + V N Sbjct: 327 NIVSGRDLVNPVTSGYRVSVFNSNVLELESYDGSIKKTYTFPEQQPYAFEVAVGLNRSSD 386 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 + G + + L + K + W+ Sbjct: 387 DMWITSGVPEVEIMSNTFSPAIKY--RVIKKNKGQLDKVKLPKSKDPLSLRSGVYPQWIL 444 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN--------------EITILPG 299 S+ Y+ + P + Y+S + + LP Sbjct: 445 NSNGYFGIILSPLTDIPAGYAAAYVSGNSVPTRLSSLYPKNQAYPASKYPGYETLLPLPK 504 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF----------IAKPMFML 349 + T ++AG PT+ ++ P+ E F A +F++ Sbjct: 505 EEGTYRFLVYAGPLAEPTLKALDRAYTNPKGENSQYLDCITFRGLFAFITEPFAALLFII 564 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M +F + G++GI+I+L TVF+KLL +PL S M+ + P I E+++K+ + P+ Sbjct: 565 MKFFKMITGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKY-KKEPK 623 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAA 468 Q ++ LYKT+ +NP+ GC P+L+Q+P A++ ++ S +R A F GWI +L A Sbjct: 624 RAQMEVMALYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAP 683 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-N 521 D +T +++ H+ PI++ + MFIQ K+S P + Q + Sbjct: 684 DVLFSWTTPV---WFIGNEFHL--LPILLGVVMFIQQKLSALQKKGPVTDQQRQQEAMGT 738 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 M ++F F +FP+GL IYW S ++ ++QQ V K+ L + + K Sbjct: 739 MMALLFTFMFYNFPSGLNIYWFSSMLLGLIQQWVTNKILD-RQHLKNEITVNKKKQ 793 >gi|15639934|ref|NP_219385.1| putative inner membrane protein translocase component YidC [Treponema pallidum subsp. pallidum str. Nichols] gi|189026172|ref|YP_001933944.1| inner membrane protein translocase component YidC [Treponema pallidum subsp. pallidum SS14] gi|3323271|gb|AAC65906.1| membrane protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018747|gb|ACD71365.1| membrane protein [Treponema pallidum subsp. pallidum SS14] Length = 665 Score = 176 bits (445), Expect = 1e-41, Method: Composition-based stats. Identities = 111/573 (19%), Positives = 218/573 (38%), Gaps = 52/573 (9%) Query: 37 RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 + Q QP + V + + + ++ P + + +G LR Sbjct: 100 AADTQETTQPAAHPSGQVLVFPESETEE-RVERTYVVRTPLVQVTFTNRGGDILSYQLRE 158 Query: 97 YH-----------LDVSSNSPIVTLLSPSN---TKNAYFAELDYVSTANNIELPNSNTVW 142 ++ + +L NA F + + +V Sbjct: 159 HYAAQRREYVEMVEQARPDHRAFSLALGDEYAPNVNALFQVKQEIGARGVHSIGFYRSVA 218 Query: 143 NLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNN-----SIDQIRFS 197 + TP K +N +FE +SL L + D+ + + Sbjct: 219 TQHADGTRTPFVLAKRYVFYPDNYMFELHVSLSADVLEEREDSRQGAKVRAVAETNAGPA 278 Query: 198 PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK-------------SSISN 244 + T ++ ++ + + ++ Sbjct: 279 TTVLARANGFDFGTASYTLRTPPEIGPERNAADKYEFRTFMVGAGGKAKTYALKGDGREQ 338 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 SW +S KY+A + +P+ S Q + + Sbjct: 339 VDTPVSWASVSGKYFALIVLPNDADSLKRLVLSAPQAETAVQHHIAFVRRAVAQPAVADV 398 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEM-------LIDWGWFYFIAKPMFMLMSYFYNLV 357 ++ G + Y P + G Y + + L+ FY L+ Sbjct: 399 -YRVYIGPCAEQYLSAYNVASRNPYGLERTYIDAVAVSGGILYPLEVLLKWLLRLFYTLI 457 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+L T+ +K+LFFPL K+ +++ M+ +QP + ++E++K + Q + + M + Sbjct: 458 PNWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQPHMQRIQERYKGNT-QKIHEEMAK 516 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTL 476 LY+ NPL+GC P L+Q+P+ FA+Y++ + E R A F WI DL+ AD +++TL Sbjct: 517 LYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPYWIPDLSLAD--SVWTL 574 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ---AMILNW-MPVVFVFALS 532 LP + + + + P++ +S + K++ P + Q I+ + MP+ F F Sbjct: 575 PFALP--VTQWTQMRMLPVLYVVSQIMFSKLTQVPHTEQQKTSMTIMTYVMPLFFFFFFY 632 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+GL++YW+ N +++VQQ ++MK + Sbjct: 633 DAPSGLLVYWTAMNGVTLVQQ-LVMKRTANKNK 664 >gi|315023046|gb|EFT36059.1| OxaI/YidC membrane insertion protein [Riemerella anatipestifer RA-YM] Length = 596 Score = 176 bits (445), Expect = 1e-41, Method: Composition-based stats. Identities = 97/560 (17%), Positives = 203/560 (36%), Gaps = 42/560 (7%) Query: 1 MERN----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N + + + + ++ + E+ + Q + + V Sbjct: 2 MQQNNGLDKNQLIGFVVFTLFLLGVMLYFQKQQTEQEQQQVATEQ------KAGATNNIV 55 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + + +V LKN + + G Q L + Y + L Sbjct: 56 KATNLPVKANEIQKVSLKNDKISVEFSGLGGQISSLLMNNYKAYNKKTNQNDLPLYLIER 115 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 N+ + + I + + + + + + +L + Sbjct: 116 NNSSYGFKFKDKSGKEINTKDLVFTPQVNGN-------TVTMTSALNGGAVVQFIYTLKD 168 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + V + I + + + QE + Sbjct: 169 YQ---VDFQVATKGLSSIVSGGKASFVWNYTPKEQEKGRAQEQQHTEFVYAFNNYKSTDY 225 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 ++S+ E +WL + +++ + +S Y KF N Sbjct: 226 DARTSMDETKEVLNWLAVKQQFFTPIIEAKNGFK-NSTGHQDMIEEGEYLKKFDFNGELE 284 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN- 355 + G + + + + ++K+ F+ +I GW + ++ + + Sbjct: 285 ITGGEFNQSFSWYFLPLDLKLLKTFDKN-----FDEIIPLGWSFIGTMNCWIFIPMYNMI 339 Query: 356 --LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 G I L T+ VK++ P+ KQ+ +A MK I+P+I+E+ K K + P Q+ Sbjct: 340 SSWGIAAGWVIFLMTILVKVVLSPIMYKQHKLSAMMKVIRPEIEEVNAKLKDADPMKKQQ 399 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A++++Y+ +N LAGC P LLQIP+F+A+++ L++R + + DL A D ++ Sbjct: 400 AVMEVYRKAGVNQLAGCLPALLQIPIFYALFRFFPNMLDLRGKG-FWFATDLTAYD--DL 456 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI------LNWMPVV 526 L +PF H+ I+ + + + I M+ Q + + PV+ Sbjct: 457 IKLPFHIPFLGE---HISIFALACTAVLLIYTVMTAGNMQQPTQEGMPNMKPLMYIFPVM 513 Query: 527 FVFALSSFPAGLIIYWSWSN 546 F+F L+S +GL Y+ SN Sbjct: 514 FLFFLNSAASGLSWYYFVSN 533 >gi|329942824|ref|ZP_08291603.1| 60Kd inner membrane family protein [Chlamydophila psittaci Cal10] gi|332287416|ref|YP_004422317.1| putative inner membrane protein translocase component YidC [Chlamydophila psittaci 6BC] gi|313847996|emb|CBY16993.1| putative lipoprotein [Chlamydophila psittaci RD1] gi|325506880|gb|ADZ18518.1| putative inner membrane protein translocase component YidC [Chlamydophila psittaci 6BC] gi|328815084|gb|EGF85073.1| 60Kd inner membrane family protein [Chlamydophila psittaci Cal10] gi|328914664|gb|AEB55497.1| Inner membrane protein oxaA [Chlamydophila psittaci 6BC] Length = 794 Score = 176 bits (445), Expect = 1e-41, Method: Composition-based stats. Identities = 101/476 (21%), Positives = 189/476 (39%), Gaps = 41/476 (8%) Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 + + + N ++ ++ + + ++T +L E + V N Sbjct: 327 NIVSGRDLVNPVASGYRVSVFNGNVLELESYDGSIKKTYTLPEQQPYAFEVAVGLNRSSD 386 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 + G + + L + K + W+ Sbjct: 387 DIWITSGVPEVEIMSNTFSPAIKY--RVIKKNKGQLDKVKLPKSKDPLSLRSGIYPQWIL 444 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN--------------EITILPG 299 S+ Y+ + P + Y+S + + LP Sbjct: 445 NSNGYFGIILSPLTDIPAGYAAAYVSGNSVPTRLSLLYPKNQAYPASKYPGYETLLPLPK 504 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF----------IAKPMFML 349 + T ++AG PT+ ++ P E F A +F++ Sbjct: 505 EEGTYRFLVYAGPLAEPTLKALDQAYTNPNGENPQYLDCITFRGLFAFITEPFAALLFII 564 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M +F + G++GI+I+L TVF+KLL +PL S M+ + P I E+++K+ + P+ Sbjct: 565 MKFFKMITGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKY-KKEPK 623 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAA 468 Q ++ LYKT+ +NP+ GC P+L+Q+P A++ ++ S +R A F GWI +L A Sbjct: 624 RAQMEVMALYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAP 683 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-N 521 D +T +++ H+ PI++ + MF+Q K+S P + Q + Sbjct: 684 DVLFSWTTPV---WFIGNEFHL--LPILLGIVMFVQQKLSALKKKGPVTDQQRQQEAMGT 738 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 M ++F F +FP+GL IYW S ++ ++QQ V K+ L + + K Sbjct: 739 MMALLFTFMFYNFPSGLNIYWFSSMLLGLIQQWVTNKILD-RQHLKNEITVNKKKQ 793 >gi|282890627|ref|ZP_06299150.1| hypothetical protein pah_c022o237 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499624|gb|EFB41920.1| hypothetical protein pah_c022o237 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 840 Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats. Identities = 105/493 (21%), Positives = 190/493 (38%), Gaps = 43/493 (8%) Query: 107 IVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 LL + L + + + + + + N N Sbjct: 341 FYPLLRRDVLPSENQKATRVAPVYYAFNLISEYPEISNLVYTVKHFDSKSIVFEANQNFR 400 Query: 167 LFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGD 226 +T +L+E+ V N +I S + P+ + + Sbjct: 401 RITKTYTLEENEKNA--PYVFNATIKIEGDSRGLWVGSGVPEVEIISGSPAPALKYRITR 458 Query: 227 KSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIP------------SKETSFHSQ 274 K E +I+ W+ S+ + ++ P S+ Sbjct: 459 KGKSEVVSISPPSDAITVTSIFPDWICNSNGFLGTILDPLTEIDPGLRVDHVSGVEVPSR 518 Query: 275 FKYLSDGHARYQAKFSANEITILPGKS--ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 L R++A+ +T+LP KS T T +FAG + + + P Sbjct: 519 LTILGQKTDRFKAQDLPGYVTLLPLKSSGGTATFRMFAGPFASNVLKTVDATFSNPETGY 578 Query: 333 LIDW-------GWFYFIAKPMFMLMSYFYNLVGN----FGIAIMLTTVFVKLLFFPLAKK 381 D+ GWF FI++P + + + +I+L TV ++++ +PL Sbjct: 579 NPDYIACQSFHGWFSFISEPFAKFLFILMQFFHSVTGSWAFSIILLTVALRVMLYPLNAW 638 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 S M+ I P++ ++E+ + P+ Q ++ LYK +NP++GC P+L+Q+P Sbjct: 639 STKSMLRMQQIAPEVKAIQERH-KKDPKKAQLEIMNLYKERGVNPVSGCLPLLIQMPFLI 697 Query: 442 AIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 ++ ++ + E+R A F GWI +L A D + LPF F + PI++ + Sbjct: 698 GMFDLLKSTFELRGASFIPGWIDNLTAPDVLFSWQTP--LPFIGNQF---HLLPILLGVV 752 Query: 501 MFIQMK-MSPPPADKGQ-------AMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 M++Q + MS P D Q ++ N M VVF FP+GL IYW S ++ ++ Sbjct: 753 MWLQQRFMSAAPKDANQMTEQERQQRVMGNMMAVVFTVMFYQFPSGLNIYWLSSMLLGML 812 Query: 552 QQAVIMKMHGAEI 564 QQ + K E Sbjct: 813 QQWWMGKKMKKET 825 >gi|313206272|ref|YP_004045449.1| protein translocase subunit yidc [Riemerella anatipestifer DSM 15868] gi|312445588|gb|ADQ81943.1| protein translocase subunit yidC [Riemerella anatipestifer DSM 15868] gi|325336286|gb|ADZ12560.1| YidC [Riemerella anatipestifer RA-GD] Length = 596 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 97/560 (17%), Positives = 203/560 (36%), Gaps = 42/560 (7%) Query: 1 MERN----WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M++N N + + + + ++ + + + Q +V + V Sbjct: 2 MQQNNGLDKNQLIGFVVFTLFLLGVMLYFQKQQTGQEQQQVATEQ------KVGATNNIV 55 Query: 57 LIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNT 116 + + +V LKN + + G Q L + Y + L Sbjct: 56 KATNLPVKANEIQKVSLKNDKISVEFSGLGGQISSLLMNNYKAYNKKTNQNDLPLYLIER 115 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 N+ + + I + + + + + + +L + Sbjct: 116 NNSSYGFKFKDKSGKEINTKDLVFTSQVNGN-------TVTMTSVLNGGAIVQFIYTLKD 168 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 + + V + I + + + QE + Sbjct: 169 YQ---VDFQVATKGLSSIVSGDKASFVWNYTPKEQEKGRAQEQQHTEFVYAFNNYKSTDY 225 Query: 237 IEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITI 296 ++S+ E +WL + +++ + +S Y KF N Sbjct: 226 DARTSMDETKEVLNWLAVKQQFFTPIIEAKNGFK-NSTGHQDMIEEGEYLKKFDFNGELE 284 Query: 297 LPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN- 355 + G + + + + ++K+ F+ +I GW + ++ + + Sbjct: 285 ITGGEFNQSFSWYFLPLDLKLLKTFDKN-----FDEIIPLGWSFIGTMNRWIFIPMYNMI 339 Query: 356 --LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 G I L T+ VK++ P+ KQ+ +A MK I+P+I+E+ K K + P Q+ Sbjct: 340 SSWGIAAGWVIFLMTILVKVVLSPIMYKQHKLSAMMKVIRPEIEEVNAKLKDADPMKKQQ 399 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 A++++Y+ +N LAGC P LLQIP+F+A+++ L++R + + DL A D ++ Sbjct: 400 AVMEVYRKAGVNQLAGCLPALLQIPIFYALFRFFPNMLDLRGKG-FWFATDLTAYD--DL 456 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMI------LNWMPVV 526 L +PF H+ I+ + + + I M+ Q + + PV+ Sbjct: 457 IKLPFHIPFLGE---HISIFALACTAVLLIYTVMTAGNMQQPTQEGMPNMKPLMYIFPVM 513 Query: 527 FVFALSSFPAGLIIYWSWSN 546 F+F L+S +GL Y+ SN Sbjct: 514 FLFFLNSAASGLSWYYFVSN 533 >gi|38502850|sp|O51829|OXAA_BUCMP RecName: Full=Membrane protein oxaA gi|2754805|gb|AAC04234.1| inner membrane protein [Buchnera aphidicola (Myzus persicae)] Length = 240 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 89/254 (35%), Positives = 148/254 (58%), Gaps = 26/254 (10%) Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + L+ G + + P ++ +D+GW +F+++P+F L++ +++ N+G + Sbjct: 5 IKSKLWVGPEIQKEMKLVA-----PNLDLTVDYGWLWFLSQPLFKLLTIINSIINNWGFS 59 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T +K++ +PL K QYVS + ++ +QPKI E++E F + Q + + MI LYK Sbjct: 60 IILITFIMKIITYPLTKSQYVSMSKIRALQPKIKEIKEAFSDNK-QRISQEMIILYKKEK 118 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 INPL G P+ +Q+PVF ++Y ++ S+E+RHAPF WIKDL++ DP Sbjct: 119 INPLGGFLPVFIQMPVFLSLYYMLIGSVELRHAPFVLWIKDLSSQDPFY----------- 167 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 + PIIM L+MF K S +D Q I+N+MPV+F FP+GL++Y+ Sbjct: 168 --------VLPIIMGLTMFFIQKTSSNNISDPIQKKIMNFMPVIFTVFFLWFPSGLVLYY 219 Query: 543 SWSNVISIVQQAVI 556 SN+++I+QQ I Sbjct: 220 IVSNLVTIIQQKFI 233 >gi|29840233|ref|NP_829339.1| putative inner membrane protein translocase component YidC [Chlamydophila caviae GPIC] gi|34098398|sp|P59809|OXAA_CHLCV RecName: Full=Inner membrane protein oxaA gi|29834581|gb|AAP05217.1| inner membrane protein, putative [Chlamydophila caviae GPIC] Length = 794 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 102/476 (21%), Positives = 189/476 (39%), Gaps = 41/476 (8%) Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 + + + N ++ T ++ +N+ ++T L + + V N Sbjct: 327 NIVSGRELTNSVASGYRVSTFNSTMLELESNDGSIKKTYKLPQQQPYAFEVEVGVNRASD 386 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLG 253 + G A + L + K + W+ Sbjct: 387 DLWITSGIPEVEIMSNAFTPAIKY--HVIKKNKGQLDKVKLPKAKDPLALRSGVYPQWIL 444 Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN--------------EITILPG 299 S+ Y+ + P + Y+ + + + LP Sbjct: 445 NSNGYFGIILSPLTDIPAGYAASYVPGSSVPTRLSLLSPKNQAYPASKYPGYETLLPLPQ 504 Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF----------IAKPMFML 349 K T ++AG PT+ +K + E F A +F++ Sbjct: 505 KEGTHRFLVYAGPLADPTLRVLDKAYTNSKGESPQYLDCITFRGFFAFITEPFAALLFII 564 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M +F + G++GI+I+L TVF+KLL +PL S M+ + P I E+++K+ + P+ Sbjct: 565 MKFFRMITGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKY-KKEPK 623 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAA 468 Q ++ LYKT+ +NP+ GC P+L+Q+P ++ ++ S +R A F GWI +L A Sbjct: 624 RAQMEVMALYKTNKVNPITGCLPLLIQLPFLIVMFDLLKSSFLLRGASFIPGWIDNLTAP 683 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-N 521 D +T ++L H+ PI++ + MF Q K+S P + Q + Sbjct: 684 DVLFSWTTPV---WFLGNEFHL--LPILLGIVMFAQQKISASKKKGPATDQQRQQETMGT 738 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 M ++F F +FP+GL IYW S ++ ++QQ K+ ++ L + + K Sbjct: 739 MMALLFTFMFYNFPSGLNIYWFSSMLLGLIQQWFTNKILDSK-HLKNEISVNKKKQ 793 >gi|325107204|ref|YP_004268272.1| membrane protein oxaA [Planctomyces brasiliensis DSM 5305] gi|324967472|gb|ADY58250.1| Membrane protein oxaA [Planctomyces brasiliensis DSM 5305] Length = 680 Score = 174 bits (439), Expect = 5e-41, Method: Composition-based stats. Identities = 111/545 (20%), Positives = 211/545 (38%), Gaps = 54/545 (9%) Query: 42 TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG--YHL 99 + + DR L N L + +GA + L Y Sbjct: 70 SESADEPKPETVELPDYPDRLITLGSLKTDA--NTFLQVDLTSRGAAIATVQLNDPRYRE 127 Query: 100 DVSSNSPIVTLLS-PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKL 158 P+ + P ++ + ++D V+ + + + V + + LT + Sbjct: 128 LTDREQPLQLVGPAPKGSQLTFDLKIDEVNRQLLEQRTSLDRVNWQVDEETLTDRSVTFT 187 Query: 159 VFKNANNILFERTISLDEHYL-----------FKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 + +T L E + N S + P Sbjct: 188 YPSPDGTLELRKTYQLQEGNPDDRNADTPGYCLNVSLEFRNLSDKPQMLVYNLQGPVGFP 247 Query: 208 QTATNTFGVQEGFIA--------VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYW 259 A S E E+S I + ++GI +Y+ Sbjct: 248 LEEAENTRRFLALQAGFVRGNSVNHEQVSAQEIAEQAEEESGIDSLQAPVRYVGIDGQYF 307 Query: 260 ASVFIPSKETS---------FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA 310 A++ IP + + + + +N + + ++T T L+ Sbjct: 308 AALLIPDENQEDENWIAQTQPQLTKRGTDEQSSLISLTLVSNPVELPANGAVTHTYTLYT 367 Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTV 369 G K + ++ D I ++GWF I+K M +M++F+N L +G+AI++ TV Sbjct: 368 GPKRTSLLRPFDADAII-------EYGWFGAISKLMLAIMNFFHNTLYLPYGLAIVMLTV 420 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 V+ +P+++K ++ MK +QP+I+E+R+K++ + L KA +++ K +G Sbjct: 421 IVRGAMYPISRKHALAAKKMKEMQPRIEEIRKKYENDKEK-LAKAQMEIMKESGF--FSG 477 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 C P+LLQ+P+F +Y+ + +S+++R A + WI +LAA D +F + LPF F Sbjct: 478 CLPMLLQLPIFIGLYQALYVSVDLRMA-EFLWINNLAAPD--RLFQMPFSLPFLGNDF-- 532 Query: 490 VGIWPIIMSLSMFIQMKMSPPPA----DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + P++ +Q KM PP Q ++ +M + PAGL IY+ S Sbjct: 533 -NLLPMLTVALFVMQQKMFAPPPANEEQALQQKMMGYMMIFIGVMFYRVPAGLCIYFIAS 591 Query: 546 NVISI 550 ++ +I Sbjct: 592 SLWAI 596 >gi|283782053|ref|YP_003372808.1| 60 kDa inner membrane insertion protein [Pirellula staleyi DSM 6068] gi|283440506|gb|ADB18948.1| 60 kDa inner membrane insertion protein [Pirellula staleyi DSM 6068] Length = 841 Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats. Identities = 79/322 (24%), Positives = 149/322 (46%), Gaps = 27/322 (8%) Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 ++ + TI PG+++ +F G KE + Y I W + Sbjct: 521 KTMNVSSRLVSQVETIAPGETLVHNYRVFFGPKEPDVLKDYGMTSLIEY-----GWSYAA 575 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 A + ++ Y+++ N+GIAI+L TV V+ P++ KQ S A M+ + P++ +++ Sbjct: 576 IPAFILRSVLETIYSIIPNYGIAIILLTVIVRSAMIPVSLKQAKSAAMMQQLAPEMAKIK 635 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA---P 457 EK+ + + +A+ +LY HN NP GC P+ +Q+PVF +Y+ +S+ +E+R A P Sbjct: 636 EKYADNMEK-QSQAIRELYAKHNFNPFGGCLPVFIQLPVFIGLYRCLSVDIELRDAALFP 694 Query: 458 FWGWIKDLAAADPTNIFT--LFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKM-SPPPA 512 W +LA D + +F ++ G++ ++P+I +Q KM +PP Sbjct: 695 GIAWASNLAGPDKLFYWKDYVFSMMGDEANGWLGPFFNVFPLITVSLFLVQQKMFTPPAT 754 Query: 513 D---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE------ 563 D Q ++ +M V PAGL +Y+ S++ I ++ ++ K + Sbjct: 755 DEQTAMQQKMMTYMTVFMGVMFYKVPAGLCVYFITSSLWGIAERKLLPKPKPVDASAAAV 814 Query: 564 ----IGLIDRLRSTFSKNYNSQ 581 + +S KN + + Sbjct: 815 ISSSTKTDEDAKSNGKKNKDKR 836 >gi|38502857|sp|O66103|OXAA_TREPA RecName: Full=Inner membrane protein oxaA gi|291060304|gb|ADD73039.1| inner membrane protein OxaA [Treponema pallidum subsp. pallidum str. Chicago] Length = 622 Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats. Identities = 111/573 (19%), Positives = 218/573 (38%), Gaps = 52/573 (9%) Query: 37 RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 + Q QP + V + + + ++ P + + +G LR Sbjct: 57 AADTQETTQPAAHPSGQVLVFPESETEE-RVERTYVVRTPLVQVTFTNRGGDILSYQLRE 115 Query: 97 YH-----------LDVSSNSPIVTLLSPSN---TKNAYFAELDYVSTANNIELPNSNTVW 142 ++ + +L NA F + + +V Sbjct: 116 HYAAQRREYVEMVEQARPDHRAFSLALGDEYAPNVNALFQVKQEIGARGVHSIGFYRSVA 175 Query: 143 NLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNN-----SIDQIRFS 197 + TP K +N +FE +SL L + D+ + + Sbjct: 176 TQHADGTRTPFVLAKRYVFYPDNYMFELHVSLSADVLEEREDSRQGAKVRAVAETNAGPA 235 Query: 198 PRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK-------------SSISN 244 + T ++ ++ + + ++ Sbjct: 236 TTVLARANGFDFGTASYTLRTPPEIGPERNAADKYEFRTFMVGAGGKAKTYALKGDGREQ 295 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 SW +S KY+A + +P+ S Q + + Sbjct: 296 VDTPVSWASVSGKYFALIVLPNDADSLKRLVLSAPQAETAVQHHIAFVRRAVAQPAVADV 355 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEM-------LIDWGWFYFIAKPMFMLMSYFYNLV 357 ++ G + Y P + G Y + + L+ FY L+ Sbjct: 356 -YRVYIGPCAEQYLSAYNVASRNPYGLERTYIDAVAVSGGILYPLEVLLKWLLRLFYTLI 414 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 N+G+AI+L T+ +K+LFFPL K+ +++ M+ +QP + ++E++K + Q + + M + Sbjct: 415 PNWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQPHMQRIQERYKGNT-QKIHEEMAK 473 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTL 476 LY+ NPL+GC P L+Q+P+ FA+Y++ + E R A F WI DL+ AD +++TL Sbjct: 474 LYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPYWIPDLSLAD--SVWTL 531 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ---AMILNW-MPVVFVFALS 532 LP + + + + P++ +S + K++ P + Q I+ + MP+ F F Sbjct: 532 PFALP--VTQWTQMRMLPVLYVVSQIMFSKLTQVPHTEQQKTSMTIMTYVMPLFFFFFFY 589 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+GL++YW+ N +++VQQ ++MK + Sbjct: 590 DAPSGLLVYWTAMNGVTLVQQ-LVMKRTANKNK 621 >gi|89898342|ref|YP_515452.1| putative inner membrane protein translocase component YidC [Chlamydophila felis Fe/C-56] gi|89331714|dbj|BAE81307.1| inner membrane protein [Chlamydophila felis Fe/C-56] Length = 794 Score = 173 bits (438), Expect = 7e-41, Method: Composition-based stats. Identities = 100/477 (20%), Positives = 195/477 (40%), Gaps = 43/477 (9%) Query: 134 ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQ 193 + + + N ++ ++ +N+ ++T L E + +V + Q Sbjct: 327 NVVSGRDLVNPVASGYRVSVFNSNMLELESNDGSIKKTYKLPEQQPYSFEVSV---GLTQ 383 Query: 194 IRFSPRGRIMRHKPQTATNTFGVQEGF-IAVLGDKSLVEQKYSDIEKSSISNFHESNSWL 252 + + +N F + + L + K + W+ Sbjct: 384 ANEDLWITSGIPEVEIMSNAFTPAIKYHVIKKNKGQLDKVKLPKPKDPLALRSGVYPQWI 443 Query: 253 GISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN--------------EITILP 298 S+ Y+ + P + Y+ + + + LP Sbjct: 444 LNSNGYFGIILSPLTDIPAGYAASYVPGSSVPTRLSLLSPKNQAYPASKYPGYETLLPLP 503 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF----------IAKPMFM 348 + T ++AG PT+ ++ + E F A +F+ Sbjct: 504 KQEGTYRFLVYAGPLAEPTLRALDQAYTNSKGESPQYLDCITFRGIFAFITEPFAALLFI 563 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +M +F + G++GI+I+L TVF+KLL +PL S M+ + P I E+++K+ + P Sbjct: 564 IMKFFRMITGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKY-KKEP 622 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAA 467 + Q ++ LYKT+ +NP+ GC P+L+Q+P A++ ++ S +R A F GWI +L A Sbjct: 623 KRAQMEVMALYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTA 682 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL- 520 D +T +++ H+ PI++ + MF Q K+S P + Q + Sbjct: 683 PDVLFSWTTPV---WFIGNEFHL--LPILLGIVMFAQQKLSALKRKAPVTDQQRQQEAMG 737 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 M ++F F +FP+GL IYW S ++ ++QQ K+ ++ L + + + K Sbjct: 738 TMMALLFTFMFYNFPSGLNIYWFSSMLLGLIQQWATNKILDSK-HLKNEISISKKKQ 793 >gi|213022847|ref|ZP_03337294.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 346 Score = 172 bits (435), Expect = 2e-40, Method: Composition-based stats. Identities = 81/313 (25%), Positives = 151/313 (48%), Gaps = 30/313 (9%) Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 G D+ + K+ I + N W+ + +Y+A+ +IP + + + Sbjct: 22 HTFRGAAYSTPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNN-- 79 Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 F + G+ + A + + PG++ T+ L+ G + + P ++ + Sbjct: 80 FYTANLGNGIVAIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVA-----PHLDLTV 134 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 D+GW +FI++P+F L+ + ++ VGN+G +I++ T V+ + +PL K QY S A M+ +QP Sbjct: 135 DYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQP 194 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 KI +RE+ Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+R Sbjct: 195 KIQAMRERLGDDK-QRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELR 253 Query: 455 HAPFWGWIKDLAAADPTNIFTLFG----------------------ILPFYLPGFMHVGI 492 HAPF WI DL+A DP + G + + + + Sbjct: 254 HAPFALWIHDLSAQDPIHSADPDGRNDVLHSEDVADHRDRPDAAEDHDLYAGHLYSVLPV 313 Query: 493 WPIIMSLSMFIQM 505 P+ ++ Q Sbjct: 314 VPVRSGAVLYRQQ 326 >gi|218658398|ref|ZP_03514328.1| putative inner membrane protein translocase component YidC [Rhizobium etli IE4771] Length = 125 Score = 171 bits (433), Expect = 3e-40, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 93/122 (76%) Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F+GWIKDL+A DPT I LFG+LPF P +H+G+WP+IM ++MF+QM+M+P P D QA Sbjct: 1 FFGWIKDLSAPDPTTIVNLFGLLPFEGPALLHLGVWPLIMGITMFVQMRMNPTPPDPTQA 60 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 MI NWMP+VF+F L+SFPAGL+IYW+W+N +S+ QQ +IMK HG +I L D L+ F + Sbjct: 61 MIFNWMPLVFMFMLASFPAGLVIYWAWNNTLSVAQQGLIMKRHGVKIELFDNLKGMFRRK 120 Query: 578 YN 579 Sbjct: 121 PA 122 >gi|226229338|ref|YP_002763444.1| inner membrane protein OxaA [Gemmatimonas aurantiaca T-27] gi|226092529|dbj|BAH40974.1| inner membrane protein OxaA [Gemmatimonas aurantiaca T-27] Length = 570 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 90/589 (15%), Positives = 200/589 (33%), Gaps = 62/589 (10%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-------------PNQ 48 +A+ L ++ + + + Sbjct: 1 MEPRRIALAVVLMAAVLILTPYLFPTAKPVPGSMAVAGDSLAADSLRDSVAAAAARVSGS 60 Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLI-----GSINLKGAQFDDLNLRGYHLDVSS 103 A D A L+ ++ + + +GA + Y + Sbjct: 61 PIAPVAGATPADSAALLATPVQLSVDTTVVKTASADYRTTNQGAALVGATMTRYQALSNR 120 Query: 104 N---SPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVF 160 V L P + ++ + + A + ++ + + + T +L Sbjct: 121 GRTKEGSVELAGPGDRLLSFRLVVPGDTIALDKQIFRTAES---SNNGVSTVRYETELAA 177 Query: 161 KNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + S V + + + + Sbjct: 178 VAGTPRQVSISYSFQPDSYHVAVAAAVTGVPETSFLLVDLPRGFRSSEADSVEDQNHLAY 237 Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 S + ++ +W +KY+ + K + + + Sbjct: 238 AYKPELSSAKGVTFRSLDPGERRIEPGPLTWAVAKNKYFMLGVLTPKGGTPFLEANFT-G 296 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF- 339 G +A ++P K+ + G +EF + ++ FE +G + Sbjct: 297 GPRVAKAATRGEATLVMPLKAGNVAFEAYVGPQEFKRLVAMGRE-----FETSNPYGGWI 351 Query: 340 -----YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 F + +L+ L ++G +++ V V+++ +PL ++ S+ M+ IQP Sbjct: 352 QGIVQPFATMVITLLLWMKKTLGVSYGWILVIFGVAVRIILWPLNQRAMRSSMQMQRIQP 411 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIYKVISISL 451 ++ ++ + K PQ LQ AM+Q+YK H ++P L+GC P+L+ +PVFFA++ V ++ Sbjct: 412 ELQAIQARHKG-DPQKLQAAMMQVYKEHGMSPFSSLSGCLPMLIPLPVFFALFFVFQNTI 470 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 E R + W D++ DP I PI+++++ + + Sbjct: 471 EFRGVS-FLWFPDISVKDPYY-------------------IIPILVAITALVLSWLGMRG 510 Query: 512 --ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 A++ Q M++ MP + + + +GL +Y+ N+ S+ QQ +I + Sbjct: 511 IKANEQQKMMMYLMPAMMLIFFVNMASGLNLYYFIQNLASLPQQWLISR 559 >gi|320104138|ref|YP_004179729.1| membrane protein insertase, YidC/Oxa1 family [Isosphaera pallida ATCC 43644] gi|319751420|gb|ADV63180.1| membrane protein insertase, YidC/Oxa1 family [Isosphaera pallida ATCC 43644] Length = 748 Score = 170 bits (430), Expect = 6e-40, Method: Composition-based stats. Identities = 118/681 (17%), Positives = 228/681 (33%), Gaps = 106/681 (15%) Query: 1 MERN-WNYFVAIALSVIIVYAWQNFYV--------------YPRIEEMNNERKNIQTVKQ 45 M + + + L++ I+ + E K + Q Sbjct: 1 MNDQLKRFLIFLPLAMAILVFSPLVMERLGLVPPPPPPADPALAANDDAPEEKPVAKDGQ 60 Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVEL-------------KNP---SLIGSINLKGAQF 89 + A + V++ N L I+ +G Sbjct: 61 EGSMPAPPAGQPPQAEPVPPPSAADVKIWPSDELVLGSSDPDNQAGFFLKLVIDQRGGGV 120 Query: 90 DDLN--L--RGYHLDVSSNSPIVTLLSPSNTKNAY------FAELDYVSTANNIELPNSN 139 L + S P+V + + F +A + L SN Sbjct: 121 VRAESALYESEHDFKGGSTGPLVLIERLEDHPAPLGLDLVRFKGASGAISAGDPSLRLSN 180 Query: 140 TVWNLISGKILTPTTPI-------KLVFKNANNILFERTISLDEHYLFKIVDTVTNNSID 192 W ++ TP+ +L + + + S + Sbjct: 181 VTWEVLPDAQGRAVTPLEDGGQELRLQTQVGQPPVTVVKTYRLRPRTDGFEHELKFVSPE 240 Query: 193 QIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ----------KYSDIEKSSI 242 + R + P F ++ VE Y + Sbjct: 241 DREIAYRLLVPYGLPVEGAWYTMTFRDFFHAGENQGQVEIATLTASDVSWYYGKGKDYQE 300 Query: 243 SNFHESNSWLGISDKYWASVFIPSKET------------SFHSQFKYLSDGHARYQAKFS 290 + + GI ++Y+A P + + + + A+ Sbjct: 301 TYQTYPLRFTGIENRYFAVFLAPQQPNLTQADRYDQETVPLELRANPANRALSDIAAEVV 360 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTI-----------HHYEKDLAIP---RFEMLIDW 336 + I++ + + T +FAG K+ + + +IP + Sbjct: 361 SRPISLTANQPVVHTYKVFAGPKDRDRLLAFGVPGADELAAFRAGFSIPLAGSMSKYVIS 420 Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + F GN+G+AI+L T F++L FPL++KQ V M+++QP I Sbjct: 421 PLLRITYGLTESVSRLFGGTQGNYGVAIILMTCFIRLCLFPLSRKQAVMAKKMQDLQPLI 480 Query: 397 DELREKFKQSPPQVL---------QKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKV 446 E+++K + + Q+ LY H +NP++ GC P L+Q+PV +++ Sbjct: 481 KEIQDKIAKGRNLMDLSQEEKLQLQQETWALYGRHKVNPISAGCLPALIQLPVMVGLWQA 540 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 ++ S+++R+A + +I +LAA D F LPF P F + PI+ +QMK Sbjct: 541 LNQSVDLRNA-TFLYIDNLAAPDMLARFPFGWDLPFLGPYF---NLLPILAVGLTLVQMK 596 Query: 507 M-SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM---KM 559 + SPPPA+ Q I +M V F+F P+GL +Y+ S++ + ++ ++ K Sbjct: 597 LFSPPPANPEAEMQQKIFKYMMVFFMFMFYKLPSGLGVYFITSSLWQVGERLLVNWLAKR 656 Query: 560 HGAEI-GLIDRLRSTFSKNYN 579 + ++ + + R Sbjct: 657 NPVDVYEVERQARENPKLKPK 677 >gi|269303185|gb|ACZ33285.1| inner membrane protein [Chlamydophila pneumoniae LPCoLN] Length = 795 Score = 170 bits (430), Expect = 6e-40, Method: Composition-based stats. Identities = 96/444 (21%), Positives = 180/444 (40%), Gaps = 38/444 (8%) Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 TP + ++ + + + + V + + + Sbjct: 344 SYTPHSIQLESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEIMSN 403 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + + SL + K +++ W+ S+ Y+ + P E + Sbjct: 404 ASVPTIKYRVIKKNKGSLDKVKLPKVKEPLAVRRGVYPQWILNSNGYFGIILTPLSEIAS 463 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKS--------------ITTTNFLFAGAKEFPT 317 Y+S A + + + + P T ++AG PT Sbjct: 464 GYGSLYISGSTAPTRLSAISPKNQLYPASKYPGYETLLPLPKDAGTHRFLVYAGPLAEPT 523 Query: 318 IH------HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG----NFGIAIMLT 367 + EK + + G F FI P L+ ++GI+I+L Sbjct: 524 LKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAALLFIIMKFFKLVTGSWGISIILL 583 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 TVF+KLL +PL S M+ + P I ++++K+K P+ Q ++ LYKT+ +NP+ Sbjct: 584 TVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKN-EPKRAQMEIMGLYKTNKVNPI 642 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPG 486 GC P+L+Q+P A++ ++ S +R A F GWI +L A D + + F Sbjct: 643 TGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQT--SIWFIGNE 700 Query: 487 FMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLI 539 F + PI++ + MF+Q K++ P + Q ++ N M ++F +FP+GL Sbjct: 701 F---HLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLN 757 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 IYW S ++ +VQQ + K+ ++ Sbjct: 758 IYWLSSMILGVVQQWITNKILDSK 781 >gi|307565938|ref|ZP_07628397.1| membrane protein insertase, YidC/Oxa1 family [Prevotella amnii CRIS 21A-A] gi|307345366|gb|EFN90744.1| membrane protein insertase, YidC/Oxa1 family [Prevotella amnii CRIS 21A-A] Length = 641 Score = 169 bits (428), Expect = 9e-40, Method: Composition-based stats. Identities = 102/613 (16%), Positives = 231/613 (37%), Gaps = 58/613 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERK----NIQTVKQPNQVDNSYAAV 56 M+ N L ++++ + + + + ++ +I T K+ + Sbjct: 1 MD--KNTITGFVLMALVLFGFAWWQQPSKEQIAQQRKQFVADSIATAKKAQKDKEDSFKA 58 Query: 57 LIDDRAQALSMS-----------PRVELKNPSLIGSINLKGAQFDDLNLRGYH------L 99 +A AL + + LKN ++ +++ KG ++ Y Sbjct: 59 EQVKQAVALDTTKLFYEALKGKKQDIVLKNNNVALTLSSKGGVVTKAIIKNYVGHNIAVK 118 Query: 100 DVSSNSPIVTLLSPSNTKNAYF--AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIK 157 D S + P VTL ++ + A+ + + T + P + T + + Sbjct: 119 DGSKDLPYVTLFDSNDQSLNFALAAKANNIETKDLYFTPTNQTDSTVTFTANAAQGKSLT 178 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 L +K + L ++ + + K + F + Sbjct: 179 LTYKLGKDYLLHLSVKAQGVE-----------GLFSPTNNQMEVEWLDKVRQQERGFSFE 227 Query: 218 EGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKY 277 + + KS Y E+ W+ ++++++V I S ++ K Sbjct: 228 NRYATLTYKKSEGGTSYLSEGAEKEETTEETTDWVAFKNQFFSAVMISKDNFSSGAKLKS 287 Query: 278 LSDGHARYQAKFSANEIT--ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + + K + P + + G +F + E + F ++ Sbjct: 288 VPQDKSSGYLKQYEANMKTAFDPSGKKPSEFEFYFGPNDFRKLQAVEAEST---FGKNLE 344 Query: 336 WGWFYFIAKPMFMLMSYFYNL--------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ++ P+F +++ ++ + + GI ++L T+ +K + +P+ KK Y+S+A Sbjct: 345 MQRLVYLGWPLFRIINRWFTIYVFDFLSKLFPMGIVLILITLLLKAITYPMVKKSYMSSA 404 Query: 388 NMKNIQPKIDELREKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ ++PK+DE +++ Q Q+AM+Q+Y + ++PL+GC P+L+Q P++ A++ Sbjct: 405 KMRVLKPKLDEATKQYNGKEDQMKKQQAMMQMYSEYGVSPLSGCLPMLIQAPIWIAMFNF 464 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQ 504 + ++++R + W+KDL+ DP + L + ++ S Q Sbjct: 465 VPNAIQLRGES-FLWMKDLSTYDPIVEWGHNVWLIGDHISLTCILFCAANLLYSWFTMQQ 523 Query: 505 MKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 K + Q ++ + MP+ F F + + +GL Y+ S S + + Sbjct: 524 QKDQMVGSQGDQMKMMQYMMLFMPLFFFFVFNDYSSGLNFYYFVSLFFSAAIMWAL-RKT 582 Query: 561 GAEIGLIDRLRST 573 E L+ L + Sbjct: 583 TNEEKLLAYLENR 595 >gi|15835845|ref|NP_300369.1| putative inner membrane protein translocase component YidC [Chlamydophila pneumoniae J138] gi|16752729|ref|NP_444996.1| putative inner membrane protein translocase component YidC [Chlamydophila pneumoniae AR39] gi|38502924|sp|Q7VQ46|OXAA_CHLPN RecName: Full=Inner membrane protein oxaA gi|7189370|gb|AAF38286.1| inner membrane protein, putative [Chlamydophila pneumoniae AR39] gi|8978684|dbj|BAA98520.1| 60 kDa inner membrane protein [Chlamydophila pneumoniae J138] Length = 795 Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats. Identities = 97/444 (21%), Positives = 181/444 (40%), Gaps = 38/444 (8%) Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 TP + ++ + + + + V + + + Sbjct: 344 SYTPHSIQLESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEIMSN 403 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + + SL + K +++ W+ S+ Y+ + P E + Sbjct: 404 ASAPTIKYRVIKKNKGSLDKVKLPKVKEPLAVRRGVYPQWILNSNGYFGIILTPLSEIAS 463 Query: 272 HSQFKYLSDGHARYQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPT 317 Y+S A + + + LP + T ++AG PT Sbjct: 464 GYGSLYISGSTAPTRLSAISPKNQLYPVSKYPGYETLLPLPKDAGTHRFLVYAGPLAEPT 523 Query: 318 IH------HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG----NFGIAIMLT 367 + EK + + G F FI P L+ ++GI+I+L Sbjct: 524 LKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAALLFIIMKFFKLVTGSWGISIILL 583 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 TVF+KLL +PL S M+ + P I ++++K+K P+ Q ++ LYKT+ +NP+ Sbjct: 584 TVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKN-EPKRAQMEIMGLYKTNKVNPI 642 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPG 486 GC P+L+Q+P A++ ++ S +R A F GWI +L A D + + F Sbjct: 643 TGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQT--SIWFIGNE 700 Query: 487 FMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLI 539 F + PI++ + MF+Q K++ P + Q ++ N M ++F +FP+GL Sbjct: 701 F---HLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLN 757 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 IYW S ++ +VQQ + K+ ++ Sbjct: 758 IYWLSSMILGVVQQWITNKILDSK 781 >gi|33241654|ref|NP_876595.1| putative inner membrane protein translocase component YidC [Chlamydophila pneumoniae TW-183] gi|33236163|gb|AAP98252.1| 60kDa inner membrane protein [Chlamydophila pneumoniae TW-183] Length = 790 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 97/444 (21%), Positives = 181/444 (40%), Gaps = 38/444 (8%) Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 TP + ++ + + + + V + + + Sbjct: 339 SYTPHSIQLESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEIMSN 398 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + + SL + K +++ W+ S+ Y+ + P E + Sbjct: 399 ASAPTIKYRVIKKNKGSLDKVKLPKVKEPLAVRRGVYPQWILNSNGYFGIILTPLSEIAS 458 Query: 272 HSQFKYLSDGHARYQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPT 317 Y+S A + + + LP + T ++AG PT Sbjct: 459 GYGSLYISGSTAPTRLSAISPKNQLYPVSKYPGYETLLPLPKDAGTHRFLVYAGPLAEPT 518 Query: 318 IH------HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG----NFGIAIMLT 367 + EK + + G F FI P L+ ++GI+I+L Sbjct: 519 LKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAALLFIIMKFFKLVTGSWGISIILL 578 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 TVF+KLL +PL S M+ + P I ++++K+K P+ Q ++ LYKT+ +NP+ Sbjct: 579 TVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKN-EPKRAQMEIMGLYKTNKVNPI 637 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPG 486 GC P+L+Q+P A++ ++ S +R A F GWI +L A D + + F Sbjct: 638 TGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQT--SIWFIGNE 695 Query: 487 FMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLI 539 F + PI++ + MF+Q K++ P + Q ++ N M ++F +FP+GL Sbjct: 696 F---HLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLN 752 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 IYW S ++ +VQQ + K+ ++ Sbjct: 753 IYWLSSMILGVVQQWITNKILDSK 776 >gi|15618230|ref|NP_224515.1| putative inner membrane protein translocase component YidC [Chlamydophila pneumoniae CWL029] gi|4376587|gb|AAD18459.1| 60 kDa Inner Membrane Protein [Chlamydophila pneumoniae CWL029] Length = 795 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 97/444 (21%), Positives = 181/444 (40%), Gaps = 38/444 (8%) Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 TP + ++ + + + + V + + + Sbjct: 344 SYTPHSIQLESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEIMSN 403 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + + SL + K +++ W+ S+ Y+ + P E + Sbjct: 404 ASAPTIKYRVIKKNKGSLDKVKLPKVKEPLAIRRGVYPQWILNSNGYFGIILTPLSEIAS 463 Query: 272 HSQFKYLSDGHARYQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPT 317 Y+S A + + + LP + T ++AG PT Sbjct: 464 GYGSLYISGSTAPTRLSAISPKNQLYPVSKYPGYETLLPLPKDAGTHRFLVYAGPLAEPT 523 Query: 318 IH------HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG----NFGIAIMLT 367 + EK + + G F FI P L+ ++GI+I+L Sbjct: 524 LKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAALLFIIMKFFKLVTGSWGISIILL 583 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 TVF+KLL +PL S M+ + P I ++++K+K P+ Q ++ LYKT+ +NP+ Sbjct: 584 TVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKN-EPKRAQMEIMGLYKTNKVNPI 642 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPG 486 GC P+L+Q+P A++ ++ S +R A F GWI +L A D + + F Sbjct: 643 TGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQT--SIWFIGNE 700 Query: 487 FMHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLI 539 F + PI++ + MF+Q K++ P + Q ++ N M ++F +FP+GL Sbjct: 701 F---HLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLN 757 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 IYW S ++ +VQQ + K+ ++ Sbjct: 758 IYWLSSMILGVVQQWITNKILDSK 781 >gi|270285312|ref|ZP_06194706.1| putative inner membrane protein translocase component YidC [Chlamydia muridarum Nigg] gi|270289329|ref|ZP_06195631.1| putative inner membrane protein translocase component YidC [Chlamydia muridarum Weiss] gi|301336709|ref|ZP_07224911.1| putative inner membrane protein translocase component YidC [Chlamydia muridarum MopnTet14] Length = 785 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 86/417 (20%), Positives = 163/417 (39%), Gaps = 42/417 (10%) Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL----GDKSLVEQKYSDIE 238 + Q + + L+ K + Sbjct: 363 EQPYAFDLEIQTTRGQEDLWITSGVPEVEIMSNAFVPAVKYHAVKKNKSDLINVKLPKAK 422 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN------ 292 S + S W+ S+ Y+ + P ++ + + Sbjct: 423 DSLLVRNDASPQWILNSNGYFGVILTPKTPLPTGYASSFIPGNAVPTRLTQLSPKDQAYP 482 Query: 293 --------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF--- 341 + LP ++ ++AG PT+ ++ + E F Sbjct: 483 ASKYPGYTAMLPLPKEAGRYQFMVYAGPLSEPTLKALDRAHTNHKGESPEYVDAIAFRGF 542 Query: 342 -------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 A +F++M +F L G++GI+I+L T+ +KL+ +PL S M+ + P Sbjct: 543 FSFITEPFAALLFIIMKFFQFLTGSWGISIILLTIVLKLVLYPLNAWSIRSMRRMQKLSP 602 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 I ++++K+ + P+ Q ++ LYK + +NP+ GC P+++QIP A++ ++ S +R Sbjct: 603 YIQDIQQKY-KREPKRAQMEIMALYKVNKVNPITGCLPLIIQIPFLIAMFDLLKSSFLLR 661 Query: 455 HAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS----- 508 A F GWI +L A D + + F F + PI++ + MF Q K+S Sbjct: 662 GASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGIVMFAQQKISAIKRS 716 Query: 509 -PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P + Q + M ++F F +FP+GL IYW S ++ ++QQ K+ + Sbjct: 717 GPVSDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWLSSMLLGVIQQWATNKILDEK 773 >gi|15835140|ref|NP_296899.1| putative inner membrane protein translocase component YidC [Chlamydia muridarum Nigg] gi|38503223|sp|Q9PKE3|OXAA_CHLMU RecName: Full=Inner membrane protein oxaA gi|7190563|gb|AAF39364.1| inner membrane protein, putative [Chlamydia muridarum Nigg] Length = 787 Score = 169 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 86/417 (20%), Positives = 163/417 (39%), Gaps = 42/417 (10%) Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVL----GDKSLVEQKYSDIE 238 + Q + + L+ K + Sbjct: 365 EQPYAFDLEIQTTRGQEDLWITSGVPEVEIMSNAFVPAVKYHAVKKNKSDLINVKLPKAK 424 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN------ 292 S + S W+ S+ Y+ + P ++ + + Sbjct: 425 DSLLVRNDASPQWILNSNGYFGVILTPKTPLPTGYASSFIPGNAVPTRLTQLSPKDQAYP 484 Query: 293 --------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF--- 341 + LP ++ ++AG PT+ ++ + E F Sbjct: 485 ASKYPGYTAMLPLPKEAGRYQFMVYAGPLSEPTLKALDRAHTNHKGESPEYVDAIAFRGF 544 Query: 342 -------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 A +F++M +F L G++GI+I+L T+ +KL+ +PL S M+ + P Sbjct: 545 FSFITEPFAALLFIIMKFFQFLTGSWGISIILLTIVLKLVLYPLNAWSIRSMRRMQKLSP 604 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 I ++++K+ + P+ Q ++ LYK + +NP+ GC P+++QIP A++ ++ S +R Sbjct: 605 YIQDIQQKY-KREPKRAQMEIMALYKVNKVNPITGCLPLIIQIPFLIAMFDLLKSSFLLR 663 Query: 455 HAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS----- 508 A F GWI +L A D + + F F + PI++ + MF Q K+S Sbjct: 664 GASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGIVMFAQQKISAIKRS 718 Query: 509 -PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P + Q + M ++F F +FP+GL IYW S ++ ++QQ K+ + Sbjct: 719 GPVSDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWLSSMLLGVIQQWATNKILDEK 775 >gi|300869651|ref|YP_003784522.1| 60 kDa inner membrane insertion protein [Brachyspira pilosicoli 95/1000] gi|300687350|gb|ADK30021.1| 60 kDa inner membrane insertion protein [Brachyspira pilosicoli 95/1000] Length = 602 Score = 167 bits (422), Expect = 5e-39, Method: Composition-based stats. Identities = 100/523 (19%), Positives = 208/523 (39%), Gaps = 47/523 (8%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN 131 L+N +I + K L+ Y+ S + + + + Y L + + +N Sbjct: 61 TLENDYVIATF--KNGSLFSYKLKNYYKQDSEITNEIVDMVEQVYEGIYPFTLTFQNLSN 118 Query: 132 NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYLFKIVDTVTNNS 190 +I LPN +++ +T + N I ++T + ++ Y T+ N S Sbjct: 119 SIALPNVFNYYSVKENNAVTYVADASI---EGNPIRIKKTFAFGEDPYQLTNTVTIENLS 175 Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK----------------- 233 + + T V+E + Sbjct: 176 EKDLSMYYSYFLGTGIGPYRTEKNSVREDATKAQYLIKGNGKSKVLLTGDIVKENILSKL 235 Query: 234 -----YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 + S + + W+ ++++Y+A + P++ + + Y+ Sbjct: 236 FGFGNGAKTNNVRYSIYEGQDKWVALNNRYFAIISSPAQSNAKFETMTFSRPVTNEYRND 295 Query: 289 FSA----NEITILPGKSITTTNFLFAGAKEFPTIHHY-EKDLAIPRFEMLIDWGWFYFIA 343 F +E I G S+ T ++ G K Y ++ F+ + Sbjct: 296 FHIANLISEHNIKSGSSVVDTYSVYIGPKVRRIFSKYYLEESYESIFQESFLGLNLRPLT 355 Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++++ Y ++ AI+L T+ K++ +PL Y S M+ + PKI+ +RE++ Sbjct: 356 YILDIILNALYGFTKSYAWAIILFTLIFKIVTYPLNHASYKSMRKMQLVNPKIERIREQY 415 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 K +P + L ++ +YK INPL GC P+LL P+ A + ++ +E+R+ P + WI Sbjct: 416 KDNPEK-LNAEIMNIYKKEKINPLGGCLPMLLPFPLLIAFFYLMQSMVELRNTP-FLWIT 473 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ------- 516 DL++ D +F + ++PI+M+++ ++ MK+ P + Sbjct: 474 DLSSPDKLFVFPAAIPILGGFN----FNLFPILMAITSYVSMKIQPSSSAGAAGGQAAMQ 529 Query: 517 -AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M+ P++ + +F +GL +YW+ NV ++QQ + K Sbjct: 530 MKMMTTIFPLMMLLMFYNFASGLALYWTAQNVFGVIQQFITSK 572 >gi|159901883|gb|ABX10617.1| 60 kDa inner membrane insertion protein [uncultured planctomycete 6N14] Length = 818 Score = 166 bits (420), Expect = 8e-39, Method: Composition-based stats. Identities = 86/346 (24%), Positives = 158/346 (45%), Gaps = 34/346 (9%) Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN-------------- 292 S++G+ +Y+ F+P++ + + G A A + Sbjct: 435 RDLSYVGVDSQYFTVAFVPAEGQASLTTLDRGGAGIASDPAAIIKHQERAVNSTFYVDTL 494 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 ++ PG S+ LFAG K + Y + I +GWF IAK + L+ Sbjct: 495 SKSLEPGGSMRQDLRLFAGPKYTSLLTQY-------GLQDCIYYGWFSAIAKFLGGLLHG 547 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 VGN+ +AI+L T+ V+ FPL++K V+ M+ + P++ ++ EK+K + Sbjct: 548 LSA-VGNYALAIILLTLLVRGCMFPLSRKAAVNAQRMQELAPEMKKINEKYKD-DMEGKL 605 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG---WIKDLAAAD 469 KA +L + +NPLAGC P+ +Q+P+F +Y+ +S+++EMR P W +LA D Sbjct: 606 KAQRELQQRVGLNPLAGCLPMFIQLPIFLGLYRTLSVNIEMRQQPALSFSDWASNLAGPD 665 Query: 470 PTNIF--TLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPPPADKGQ----AMILN 521 + L+ L G++ + P+I+ + Q K+ PPA Q +++ Sbjct: 666 KLAYWGDWLWEYLSGRGTGWLGPYFNVLPVIVVVLYLTQQKLFMPPATDEQTALTQKMMS 725 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 M ++ PAGL IY+ S+ I ++ ++ + ++ Sbjct: 726 VMTLMMGLFFFRVPAGLCIYFITSSAWGICERIIVKRTLPSKKHFD 771 >gi|46446715|ref|YP_008080.1| putative inner membrane protein translocase component YidC [Candidatus Protochlamydia amoebophila UWE25] gi|46400356|emb|CAF23805.1| putative 60 kDa inner-membrane protein [Candidatus Protochlamydia amoebophila UWE25] Length = 866 Score = 164 bits (414), Expect = 4e-38, Method: Composition-based stats. Identities = 110/642 (17%), Positives = 215/642 (33%), Gaps = 88/642 (13%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 NY+ AIAL + Q + + + +++ + I+ Sbjct: 221 NSQQNYYAAIAL----LKTSQGYLPVGFYDFTSQSLVRFNKIQELSSFIAPTQDTQINSA 276 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNL----------------------RGYHL 99 L+N + G ++NL + + Sbjct: 277 TNGKREQKFYVLENNYQQLVFSNYGGALAEINLPFRTDENQASVVREIEFDRNMVKHHPY 336 Query: 100 ----------DVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKI 149 + + + Y+ L + + + Sbjct: 337 NALFPSHAYYTHAKDQGKDFIFHEKGQLGGYYPLLRRDLIQISPRKSVQIKPQHYALNIV 396 Query: 150 LTPTTPIKLVFKNANNILFERTIS-LDEHYLFKIVDTV----------TNNSIDQIRFSP 198 +L+++ + T + + N ++ S Sbjct: 397 SEYPELAELIYEVIHFDNRSITFEAVQNQRRITKTYSFGDSLQEGPYCLNLALQIDGDSR 456 Query: 199 RGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKY 258 + P+ + G + E + D+ K + + W+ S+ + Sbjct: 457 GLWLTSGVPEVEWISGGPAPSLKYRITRNQKSEVEKIDLPKDASTITSIYPDWICNSNGF 516 Query: 259 WASVFIPS------------KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT--T 304 + P T+ S+ + + YQA + LP KS Sbjct: 517 LGMILDPLKEIDPGFKIQAISGTNVPSRLIEIDQEYNLYQAANLPGYMAYLPLKSQGGLM 576 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG-----------WFYFIAKPMFMLMSYF 353 FAG + T+ + + D+ AK + +LM +F Sbjct: 577 NFRFFAGPFDDETLKTIDAKYSNSETGYNPDYIACQTMHGWFTFISEPFAKFLLILMKFF 636 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + L ++ ++I+L TV ++L+ +PL S M+ I P++ ++EK+ + P+ Q Sbjct: 637 HYLTNSWALSIVLLTVSLRLMLYPLNTWSTKSMVRMQQIAPQVTAIQEKY-KKDPKKAQL 695 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTN 472 ++ LY+ +NP +GC P+L+Q+P ++ ++ S +R APF GWI DL A D Sbjct: 696 EIMSLYRERGVNPASGCLPLLIQMPFLIGMFDLLKSSFALRGAPFISGWIDDLTAPDVLF 755 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--------MSPPPADKGQAMIL-NWM 523 ++ + F F + PI++ L MF+Q + +S + Q + M Sbjct: 756 SWSKP--IFFIGTEF---HLLPILLGLVMFLQQRFMSSGPKDLSQMTDQQRQQRAMGTMM 810 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 VVF +FP+GL IYW S ++ +VQQ + K Sbjct: 811 TVVFAVMFYNFPSGLNIYWLSSMLLGMVQQWFVSKQIQKTPN 852 >gi|218677921|ref|ZP_03525818.1| putative inner membrane protein translocase component YidC [Rhizobium etli CIAT 894] Length = 240 Score = 164 bits (413), Expect = 5e-38, Method: Composition-based stats. Identities = 100/239 (41%), Positives = 145/239 (60%) Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 QAL+ SPRV + +L GSINL GA+ DDL L+GYH V +SPI+TL SP+ TK+ YF Sbjct: 2 EQALAKSPRVVIDTAALSGSINLAGARLDDLKLKGYHETVDDSSPIITLFSPAETKDGYF 61 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 EL Y+ + +P T+W G LT TP+ L + N + F RTIS+DE Y+F Sbjct: 62 TELGYIGSDATGSVPGPTTLWTAPEGAKLTEKTPVTLSYTNDKGLTFTRTISVDERYMFT 121 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 + D + N+ S GR+MR+ T + + + EGFI V+GD L+E KYS +EK + Sbjct: 122 VADKIVNSGQAPAALSSYGRVMRYNKPTTPSVYVLHEGFIGVIGDDGLIESKYSAVEKEA 181 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 +S + WLGI+DKYWA+ +P + ++ ++F Y +DG RYQA + + T+ PG+ Sbjct: 182 VSPAKSTGGWLGITDKYWAATIVPPQSAAYEAKFSYFTDGQPRYQADYKDDAFTVAPGQ 240 >gi|296435767|gb|ADH17941.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis G/9768] gi|296436691|gb|ADH18861.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis G/11222] gi|297140126|gb|ADH96884.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis G/9301] Length = 785 Score = 163 bits (411), Expect = 8e-38, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 160/371 (43%), Gaps = 38/371 (10%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 L K + S + + + W+ S+ Y+ + P ++ Sbjct: 409 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFIPGNVVP 468 Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + + LP ++ ++AG PT+ ++ A + Sbjct: 469 TRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKALDRANANSKG 528 Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 E F A +F++M +F L G++GI+I+L T+ +KLL +PL Sbjct: 529 ETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 588 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 S M+ + P I E+++K+ + P+ Q ++ LYK + +NP+ GC P+L+QIP Sbjct: 589 WSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 647 Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 A++ ++ S +R A F GWI +L A D + + F F + PI++ + Sbjct: 648 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 702 Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 MF Q K+S P + Q + M ++F F +FP+GL IYW S ++ ++Q Sbjct: 703 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 762 Query: 553 QAVIMKMHGAE 563 Q V K+ + Sbjct: 763 QWVTNKILDEK 773 >gi|76788973|ref|YP_328059.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis A/HAR-13] gi|237802674|ref|YP_002887868.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis B/Jali20/OT] gi|76167503|gb|AAX50511.1| 60 kDa inner membrane protein [Chlamydia trachomatis A/HAR-13] gi|231273908|emb|CAX10700.1| inner membrane protein [Chlamydia trachomatis B/Jali20/OT] gi|296437627|gb|ADH19788.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis G/11074] Length = 787 Score = 163 bits (411), Expect = 1e-37, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 160/371 (43%), Gaps = 38/371 (10%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 L K + S + + + W+ S+ Y+ + P ++ Sbjct: 411 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFIPGNVVP 470 Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + + LP ++ ++AG PT+ ++ A + Sbjct: 471 TRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKALDRANANSKG 530 Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 E F A +F++M +F L G++GI+I+L T+ +KLL +PL Sbjct: 531 ETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 590 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 S M+ + P I E+++K+ + P+ Q ++ LYK + +NP+ GC P+L+QIP Sbjct: 591 WSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 649 Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 A++ ++ S +R A F GWI +L A D + + F F + PI++ + Sbjct: 650 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 704 Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 MF Q K+S P + Q + M ++F F +FP+GL IYW S ++ ++Q Sbjct: 705 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 764 Query: 553 QAVIMKMHGAE 563 Q V K+ + Sbjct: 765 QWVTNKILDEK 775 >gi|255317353|ref|ZP_05358599.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis 6276s] Length = 785 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 160/371 (43%), Gaps = 38/371 (10%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 L K + S + + + W+ S+ Y+ + P ++ Sbjct: 409 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFIPGNVVP 468 Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + + LP ++ ++AG PT+ ++ A + Sbjct: 469 TRLSQLPPKDQTYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKALDRANANSKG 528 Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 E F A +F++M +F L G++GI+I+L T+ +KLL +PL Sbjct: 529 ETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 588 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 S M+ + P I E+++K+ + P+ Q ++ LYK + +NP+ GC P+L+QIP Sbjct: 589 WSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 647 Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 A++ ++ S +R A F GWI +L A D + + F F + PI++ + Sbjct: 648 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 702 Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 MF Q K+S P + Q + M ++F F +FP+GL IYW S ++ ++Q Sbjct: 703 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 762 Query: 553 QAVIMKMHGAE 563 Q V K+ + Sbjct: 763 QWVTNKILDEK 773 >gi|255348610|ref|ZP_05380617.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis 70] gi|255506828|ref|ZP_05382467.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis D(s)2923] gi|296434839|gb|ADH17017.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis E/150] Length = 785 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 159/371 (42%), Gaps = 38/371 (10%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 L K + S + + + W+ S+ Y+ + P ++ Sbjct: 409 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFILGNVVP 468 Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + + LP ++ ++AG PT+ ++ A + Sbjct: 469 TRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKALDRANANSKG 528 Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 E F A +F++M +F L G++GI+I+L T+ +KLL +PL Sbjct: 529 ETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 588 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 S M+ + P I E+++K + P+ Q ++ LYK + +NP+ GC P+L+QIP Sbjct: 589 WSIRSMRRMQKLSPYIQEIQQKH-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 647 Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 A++ ++ S +R A F GWI +L A D + + F F + PI++ + Sbjct: 648 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 702 Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 MF Q K+S P + Q + M ++F F +FP+GL IYW S ++ ++Q Sbjct: 703 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 762 Query: 553 QAVIMKMHGAE 563 Q V K+ + Sbjct: 763 QWVTNKILDEK 773 >gi|255311052|ref|ZP_05353622.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis 6276] Length = 787 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 160/371 (43%), Gaps = 38/371 (10%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 L K + S + + + W+ S+ Y+ + P ++ Sbjct: 411 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFIPGNVVP 470 Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + + LP ++ ++AG PT+ ++ A + Sbjct: 471 TRLSQLPPKDQTYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKALDRANANSKG 530 Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 E F A +F++M +F L G++GI+I+L T+ +KLL +PL Sbjct: 531 ETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 590 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 S M+ + P I E+++K+ + P+ Q ++ LYK + +NP+ GC P+L+QIP Sbjct: 591 WSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 649 Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 A++ ++ S +R A F GWI +L A D + + F F + PI++ + Sbjct: 650 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 704 Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 MF Q K+S P + Q + M ++F F +FP+GL IYW S ++ ++Q Sbjct: 705 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 764 Query: 553 QAVIMKMHGAE 563 Q V K+ + Sbjct: 765 QWVTNKILDEK 775 >gi|237804596|ref|YP_002888750.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis B/TZ1A828/OT] gi|231272896|emb|CAX09807.1| inner membrane protein [Chlamydia trachomatis B/TZ1A828/OT] Length = 787 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 90/371 (24%), Positives = 160/371 (43%), Gaps = 38/371 (10%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 L K + S + + + W+ S+ Y+ + P ++ Sbjct: 411 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFIPGNVVP 470 Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + + LP ++ ++AG PT+ ++ A + Sbjct: 471 TRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKALDRANANSKG 530 Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 E F A +F++M +F L G++GI+I+L T+ +KLL +PL Sbjct: 531 ETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 590 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 S M+ + P I E+++K+ + P+ Q ++ LYK + +NP+ GC P+L+QIP Sbjct: 591 WSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 649 Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 A++ ++ S +R A F GWI +L A D + + F F + PI++ + Sbjct: 650 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 704 Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 MF Q K+S P + Q + M ++F F +FP+GL IYW S ++ +VQ Sbjct: 705 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVVQ 764 Query: 553 QAVIMKMHGAE 563 Q V K+ + Sbjct: 765 QWVTNKILDEK 775 >gi|255503150|ref|ZP_05381540.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis 70s] gi|289525290|emb|CBJ14766.1| inner membrane protein [Chlamydia trachomatis Sweden2] gi|296438559|gb|ADH20712.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis E/11023] Length = 787 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 159/371 (42%), Gaps = 38/371 (10%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 L K + S + + + W+ S+ Y+ + P ++ Sbjct: 411 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFILGNVVP 470 Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + + LP ++ ++AG PT+ ++ A + Sbjct: 471 TRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKALDRANANSKG 530 Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 E F A +F++M +F L G++GI+I+L T+ +KLL +PL Sbjct: 531 ETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 590 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 S M+ + P I E+++K + P+ Q ++ LYK + +NP+ GC P+L+QIP Sbjct: 591 WSIRSMRRMQKLSPYIQEIQQKH-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 649 Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 A++ ++ S +R A F GWI +L A D + + F F + PI++ + Sbjct: 650 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 704 Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 MF Q K+S P + Q + M ++F F +FP+GL IYW S ++ ++Q Sbjct: 705 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 764 Query: 553 QAVIMKMHGAE 563 Q V K+ + Sbjct: 765 QWVTNKILDEK 775 >gi|15604972|ref|NP_219756.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis D/UW-3/CX] gi|38502864|sp|O84253|OXAA_CHLTR RecName: Full=Inner membrane protein oxaA gi|3328662|gb|AAC67844.1| 60kDa Inner Membrane Protein [Chlamydia trachomatis D/UW-3/CX] gi|297748381|gb|ADI50927.1| 60 kDa inner membrane protein YIDC [Chlamydia trachomatis D-EC] gi|297749261|gb|ADI51939.1| 60 kDa inner membrane protein YIDC [Chlamydia trachomatis D-LC] Length = 787 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 88/323 (27%), Positives = 149/323 (46%), Gaps = 24/323 (7%) Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 +AS FIP D + LP ++ ++AG PT+ Sbjct: 459 YASSFIPGNVVPTRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTL 518 Query: 319 HHYEKDLAIPRFEMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTT 368 ++ A + E F A +F++M +F L G++GI+I+L T Sbjct: 519 KALDRANANSKGETPEYVDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLT 578 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + +KLL +PL S M+ + P I E+++K+ + P+ Q ++ LYK + +NP+ Sbjct: 579 IVLKLLLYPLNAWSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPIT 637 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+QIP A++ ++ S +R A F GWI +L A D + + F F Sbjct: 638 GCLPLLIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF 695 Query: 488 MHVGIWPIIMSLSMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLII 540 + PI++ + MF Q K+S P + Q + M ++F F +FP+GL I Sbjct: 696 ---HLLPILLGVVMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNI 752 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW S ++ ++QQ V K+ + Sbjct: 753 YWFSSMLLGVIQQWVTNKILDEK 775 >gi|327405480|ref|YP_004346318.1| Membrane protein oxaA [Fluviicola taffensis DSM 16823] gi|327320988|gb|AEA45480.1| Membrane protein oxaA [Fluviicola taffensis DSM 16823] Length = 649 Score = 161 bits (406), Expect = 4e-37, Method: Composition-based stats. Identities = 96/641 (14%), Positives = 226/641 (35%), Gaps = 84/641 (13%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS-------- 52 M+ N + + L ++ + E +++ + Q + +S Sbjct: 1 MD--RNTVIGLTLIGALLVVFTYMSQPSEKEVQAKQKEQKELALQAKKEADSLDKEAKNK 58 Query: 53 --------------------------------YAAVLIDDRAQALSMSPRVELKNPSLIG 80 + +S V L++ LI Sbjct: 59 PRLVAKKDKDGNQIKDEKGGLVYVNQVTKGDTTIVPRVKVPTTVISKGEIVRLESEKLIV 118 Query: 81 SINLKGAQFDDLNLRGYH-----LDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIEL 135 + KG + L+ + + L + KN + + Sbjct: 119 DFSTKGGVVSAVQLKEFESYMNFAKNDGKITPLYLFKDGDQKN------QLIFNIAGNKY 172 Query: 136 PNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIR 195 N + ++S + +I++ + + I N + Sbjct: 173 ATGNKEFEIVSKSKHKVVFRHDV---AEGSIIYTYNLKGGYDLGYTIQLKDLNGKVLPNS 229 Query: 196 FSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGIS 255 ++ + + Q + + + + ++ S W+ Sbjct: 230 VMLDWQMEMLR---SERLLSEQRKVSTICYESADGKLDWNSEVAESYKTAETDMKWVAYK 286 Query: 256 DKYWASVFIPSKETSFH------SQFKYLSDGHARYQAKFSANEITILPG-KSITTTNFL 308 Y++S+ + +K S + K+ + + K + Sbjct: 287 QSYFSSILNADNGFKVKGTKFTSTNYKEGSKEFFTHIRKYRSKLNLGMQSVKDGKASFSW 346 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIA-KPMFMLMSYFYNLVGNFGIAIMLT 367 + G ++ + Y +D + + WG F +I + + ++F NL N G+AI+L Sbjct: 347 YFGPNDYHVLASYNQDYDDI---LNLGWGVFRWINLYAVQPVFTFFMNLGINAGLAILLL 403 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA-MIQLYKTHNINP 426 T+ +KL+ P+ K +VS+A MK ++P+ID++ K+ + + ++ M+ LY+ +P Sbjct: 404 TIILKLVLMPVQWKMFVSSAKMKILKPQIDDINAKYPKKEDAMKKQMDMMALYRASGASP 463 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 LAGC P+L Q+P+ A+++ + ++R + W +DL++ D +I+ +P Y Sbjct: 464 LAGCVPMLFQMPILLAVFRFFPATFDLRQRG-FLWAEDLSSFD--SIWDFGTYIPLYGN- 519 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL-------SSFPAGLI 539 HV ++ ++M+ + + ++ + Q + M ++ +++ +GL Sbjct: 520 --HVSLFTLLMAGTTLLYTHLNSSNMTQQQQPGMPNMKIIMYMFPFMMIFFFNNYSSGLS 577 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 Y+ S +++I+ VI K E L ++ + + Sbjct: 578 YYYFISTLMTIILMFVIKKFFVNEEKLKAKMAEAQTNSAKK 618 >gi|158319055|ref|YP_001511563.1| 60 kDa inner membrane insertion protein [Frankia sp. EAN1pec] gi|158114460|gb|ABW16657.1| 60 kDa inner membrane insertion protein [Frankia sp. EAN1pec] Length = 461 Score = 161 bits (406), Expect = 4e-37, Method: Composition-based stats. Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 31/235 (13%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + +++L + V++L FPL KQ S M+ +QP+I E++EK+ Q+ ++ Sbjct: 29 FFAWAFSVVLLVICVRILIFPLFVKQVKSQRTMQMMQPRIKEIKEKYGHDKQQMQL-EIM 87 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH--------------------- 455 +L K H NPL GC PILLQIP+F +++ V + M Sbjct: 88 KLQKEHG-NPLLGCLPILLQIPLFISLFHVFTHLAPMNEGPGGSLVWRPRVGLSADQVEQ 146 Query: 456 -APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---P 511 A W L+ + ++ +L + + + ++M + F + P Sbjct: 147 IASAKLWGISLSNSFGSSQESLDFLGANGTHAKILAVVLIVLMGATTFFTQRQIMARTGP 206 Query: 512 ADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 D QAM+ + P++ FP +++YW +N+ S+ QQ ++K Sbjct: 207 VDPQQAMVQKILLYGSPLMLAIFGFRFPIAVLLYWLTTNLWSMGQQFFVIKKMPP 261 >gi|301335721|ref|ZP_07223965.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis L2tet1] Length = 785 Score = 160 bits (405), Expect = 5e-37, Method: Composition-based stats. Identities = 89/366 (24%), Positives = 158/366 (43%), Gaps = 38/366 (10%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 L K + S + + + W+ S+ Y+ + P ++ Sbjct: 409 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFIPGNVVP 468 Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + + LP ++ ++AG PT+ ++ A + Sbjct: 469 TRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKTLDRANANSKG 528 Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 E F A +F++M +F L G++GI+I+L T+ +KLL +PL Sbjct: 529 ETPEYIDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 588 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 S M+ + P I E+++K+ + P+ Q ++ LYK + +NP+ GC P+L+QIP Sbjct: 589 WSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 647 Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 A++ ++ S +R A F GWI +L A D + + F F + PI++ + Sbjct: 648 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 702 Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 MF Q K+S P + Q + M ++F F +FP+GL IYW S ++ ++Q Sbjct: 703 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 762 Query: 553 QAVIMK 558 Q V K Sbjct: 763 QWVTNK 768 >gi|166154462|ref|YP_001654580.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis 434/Bu] gi|166155337|ref|YP_001653592.1| putative inner membrane protein translocase component YidC [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|165930450|emb|CAP03943.1| inner membrane protein [Chlamydia trachomatis 434/Bu] gi|165931325|emb|CAP06897.1| inner membrane protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 787 Score = 160 bits (405), Expect = 5e-37, Method: Composition-based stats. Identities = 89/366 (24%), Positives = 158/366 (43%), Gaps = 38/366 (10%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHAR 284 L K + S + + + W+ S+ Y+ + P ++ Sbjct: 411 NKSDLFNVKLPKAKDSLLVRNNATPQWILNSNGYFGVILTPRTPIPAGYASSFIPGNVVP 470 Query: 285 YQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 + + LP ++ ++AG PT+ ++ A + Sbjct: 471 TRLSQLPPKDQAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLADPTLKTLDRANANSKG 530 Query: 331 EMLIDWGWFYF----------IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 E F A +F++M +F L G++GI+I+L T+ +KLL +PL Sbjct: 531 ETPEYIDAIAFRGFFSFITEPFAALLFVIMKFFKFLTGSWGISIILLTIVLKLLLYPLNA 590 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 S M+ + P I E+++K+ + P+ Q ++ LYK + +NP+ GC P+L+QIP Sbjct: 591 WSIRSMRRMQKLSPYIQEIQQKY-KREPKRAQMEIMALYKMNKVNPITGCLPLLIQIPFL 649 Query: 441 FAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 A++ ++ S +R A F GWI +L A D + + F F + PI++ + Sbjct: 650 IAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETP--IWFIGKEF---HLLPILLGV 704 Query: 500 SMFIQMKMS------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 MF Q K+S P + Q + M ++F F +FP+GL IYW S ++ ++Q Sbjct: 705 VMFAQQKISAVKRSGPASDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWFSSMLLGVIQ 764 Query: 553 QAVIMK 558 Q V K Sbjct: 765 QWVTNK 770 >gi|217033106|ref|ZP_03438570.1| hypothetical protein HPB128_27g13 [Helicobacter pylori B128] gi|216945179|gb|EEC23870.1| hypothetical protein HPB128_27g13 [Helicobacter pylori B128] Length = 173 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 111/192 (57%), Gaps = 21/192 (10%) Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 VS +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFA Sbjct: 1 MVSMQKLKELAPKMKELQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFA 59 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 IY+V+ ++E++ + + WI DL+ DP I P++M SM+ Sbjct: 60 IYRVLYNAVELKSSEWILWIHDLSIMDPYF-------------------ILPLLMGASMY 100 Query: 503 IQMKMSP-PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++P D QA I ++P++F L +FPAGL++YW+ +N++S++QQ +I K+ Sbjct: 101 WHQSVTPNTMTDPMQAKIFKFLPLLFTIFLITFPAGLVLYWTTNNILSVLQQLIINKILE 160 Query: 562 AEIGLIDRLRST 573 + + + + Sbjct: 161 NKKRMHAQNKKE 172 >gi|221633069|ref|YP_002522294.1| inner membrane protein oxaA [Thermomicrobium roseum DSM 5159] gi|221155473|gb|ACM04600.1| inner membrane protein oxaA [Thermomicrobium roseum DSM 5159] Length = 312 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 79/233 (33%), Positives = 116/233 (49%), Gaps = 31/233 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + ++ + G+ G+AI+L T+ +K L PL K ST M+ +QPK Sbjct: 1 MIIWDQFVYAIEWGLARTAEVTGSAGLAIILFTILIKTLLLPLTIKSVRSTKAMQELQPK 60 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLE 452 I EL++K+ Q L M++LY+ H INP++GC P+LLQIPVFF +Y I S Sbjct: 61 IRELQKKY-GQDRQRLSAEMMKLYQEHGINPMSGCLPMLLQIPVFFGLYFAIRNLSLSQV 119 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 A + WI DLA DP + I PI+ L FIQ +M+ P Sbjct: 120 GAWAHGFLWIPDLAKPDPLH-------------------ILPILAGLFQFIQTRMTRPAG 160 Query: 513 -----DKGQAMI---LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 D Q M+ + +MP++ V +F AG ++YW S V S+VQQ +I Sbjct: 161 VRRFEDPQQQMMYSMMLFMPLMVVLFGWNFAAGPVLYWVVSAVYSVVQQWLIT 213 >gi|147679254|ref|YP_001213469.1| preprotein translocase subunit YidC [Pelotomaculum thermopropionicum SI] gi|146275351|dbj|BAF61100.1| preprotein translocase subunit YidC [Pelotomaculum thermopropionicum SI] Length = 222 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 25/229 (10%) Query: 336 WGWFYFIAKPMFMLMSYFYNLV-----GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 F I M L+++ Y L ++GIAI+L T+ VK++ +PL+ KQ S M+ Sbjct: 1 MEIFSSIVNGMTWLLNWLYQLTVAAGLPSYGIAIILLTIIVKMVLYPLSHKQMKSMLAMQ 60 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 IQPK+ E++EK+K P+ +Q+A+++LY+ HN+NP AGC P+L+Q+P+ A+Y+ + Sbjct: 61 QIQPKVKEIQEKWKNKDPKKMQQAIMELYREHNVNPAAGCLPLLIQMPILIALYRSLFNF 120 Query: 451 LEMRHAP-FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + A + W+ +L+ DP I PI+ ++ F+Q KM+ Sbjct: 121 PYINTAHAVFLWVPNLSVKDPYY-------------------ILPILAGVTTFLQSKMTT 161 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +D Q M+L MPV + S PAGL +YW N+ IVQQ I K Sbjct: 162 TTSDPTQRMMLYTMPVFIAWIAGSVPAGLALYWVVFNIGGIVQQYFINK 210 >gi|288916713|ref|ZP_06411088.1| 60 kDa inner membrane insertion protein [Frankia sp. EUN1f] gi|288351968|gb|EFC86170.1| 60 kDa inner membrane insertion protein [Frankia sp. EUN1f] Length = 476 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 32/236 (13%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + ++++L + V++L FPL KQ S M+ +QP+I E++EK+ Q+ ++ Sbjct: 29 FFAWALSVILLVICVRILIFPLFVKQVKSQRTMQMMQPRIKEIKEKYGHDKQQMQL-EIM 87 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW----------------- 459 +L K H NPL GC PILLQIP+F +++ V + M P Sbjct: 88 KLQKEHG-NPLLGCLPILLQIPLFISLFHVFTHLAPMNEGPGGSLVWRPRVGLSADQVEQ 146 Query: 460 -----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP----P 510 W L++ ++ L + + + + + M ++ F+ + Sbjct: 147 IATAKLWGISLSSKFTSSPDFLDFLGANGMHTKILAVVLIVTMGVTTFLTQRQIMNRAGT 206 Query: 511 PADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 D QAM+ + P++ FP +++YW +N+ S+ QQ +++ Sbjct: 207 AVDPQQAMVQKILLYGSPLMLAIFGFRFPIAVLLYWLTTNLWSLGQQFFVIRKMPP 262 >gi|262340996|ref|YP_003283851.1| putative inner membrane protein translocase component YidC [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272333|gb|ACY40241.1| putative inner membrane protein translocase component YidC [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 580 Score = 158 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 108/526 (20%), Positives = 210/526 (39%), Gaps = 30/526 (5%) Query: 73 LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSN-SPIVTLLSPSNTKNAYFAELDYVSTAN 131 L+N L I+ G +++ L+ Y +S L N+ Y N Sbjct: 67 LENNVLRLKISNVGGMINEVLLKKYKAYDASLLHHSKNLFLIKNSSFLYKMSFSNKKGLN 126 Query: 132 NIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF---ERTISLDEHYLFKIVDTVTN 188 + + K ++ N F TI + Y N Sbjct: 127 IDTTNLLFQPFLFENQKKRIQILIMRAKNPYGNGKGFLDYIYTIGKNNQYDIGFSVRTIN 186 Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES 248 + S + N + +K+ V K+ +K+ +N + Sbjct: 187 FYPFKKLVSINLEQKILSLEKDRNWENSYTQVYYSVLNKNSVSVKHLSEKKTEETNI-SN 245 Query: 249 NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL 308 +W+ +++AS+F+P K+ + + + I + Sbjct: 246 MNWIAHKQQFFASIFVPEKKFQNIFVRSENFSSGNSLKNIQFKTLMNANKNEEIHFSFRF 305 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF---YFIAKPMFMLMSYFYNLVGNFGIAIM 365 + G +F + Y+ FE +I +GW + ++ + N+G+ I+ Sbjct: 306 YFGPLDFNLLKGYKN-----GFENIIPFGWGFLKWINKYFFLIIFQFLEQTSLNYGVIII 360 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-VLQKAMIQLYKTHNI 424 L T VKL+ +P+ KQY +A MK I+P+++EL K+K + QKAM++LYK I Sbjct: 361 LMTFVVKLILYPITYKQYKLSAIMKLIRPEVEELNNKYKNNEDAFKKQKAMMELYKKVGI 420 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NP++GC L QIP+F++++K L +R + W++DL + D +I L +PFY Sbjct: 421 NPMSGCISTLFQIPIFYSLFKFFPTLLNLRGKS-FLWVEDLTSYD--SILELPFFIPFYG 477 Query: 485 PGFMHVGIWPIIMSLSMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSF 534 H+ + ++ +L++ + K+ + + IL MPV+ + ++S+ Sbjct: 478 N---HISLLTLLYALALLVYTKLSNNEKKDISQNENGTIPDMSFILYLMPVIMLLFINSY 534 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 + L +Y+ SN+I+I I + E ++ +++ + Sbjct: 535 ASALSLYYFTSNIINIGFLFFIKEFMLDEKKILIKIQENKINIKKT 580 >gi|289803256|ref|ZP_06533885.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 133 Score = 157 bits (396), Expect = 5e-36, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 20/147 (13%) Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + M+ LYK +NPL GC+P+++Q+P+F A+Y ++ S+E+RHAPF WI D Sbjct: 6 GDDKQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWIHD 65 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWM 523 L+A DP I PI+M ++MF KMSP D Q I+ +M Sbjct: 66 LSAQDPYY-------------------ILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFM 106 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISI 550 PV+F FP+GL++Y+ SN+++I Sbjct: 107 PVIFTVFFLWFPSGLVLYYIVSNLVTI 133 >gi|86743220|ref|YP_483620.1| 60 kDa inner membrane insertion protein [Frankia sp. CcI3] gi|86570082|gb|ABD13891.1| 60 kDa inner membrane insertion protein [Frankia sp. CcI3] Length = 462 Score = 157 bits (395), Expect = 7e-36, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 107/270 (39%), Gaps = 31/270 (11%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + L + + + ++ +++L V V++L FPL KQ S Sbjct: 1 MLDPLYHLAANAIVFFHRGFAPIFGADSFFSWAFSVVLLVVCVRILIFPLFVKQVKSQRT 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP+I E+REK +Q+ M+ L + H NPL GC PI LQIP+F +++ V + Sbjct: 61 MQMMQPRIKEIREKH-GHDKPRMQQEMMALQREHG-NPLLGCLPIFLQIPLFISLFHVFT 118 Query: 449 ISLEMRHAPF--WGWIK--------------------DLAAADPTNIFTLFGILPFYLPG 486 M P W LA+ ++ + Sbjct: 119 HLAPMNEGPNHSLVWRPRVGLSADQVEQIASAKVFGISLASKFTSDGDFSHFLGVDSTHV 178 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNWM----PVVFVFALSSFPAGLI 539 + + ++M L+ F+ + P D QAM+ + P++ F FP ++ Sbjct: 179 RILAIVLIVLMGLTTFLTQRQIMARTGPLDPQQAMVQKALLYGSPLMLAFFGFRFPIAVL 238 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 +YW +N+ S+ QQ IMK Sbjct: 239 LYWLTTNLWSMGQQFFIMKKMPPIKPADAN 268 >gi|317123172|ref|YP_004103175.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter marianensis DSM 12885] gi|315593152|gb|ADU52448.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter marianensis DSM 12885] Length = 224 Score = 156 bits (394), Expect = 9e-36, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 117/223 (52%), Gaps = 24/223 (10%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + + + + G+ G++I+L TV V+L+ PL Q S M+ +QP+ Sbjct: 2 SQLWQWFVGAIETGLEWSRAVTGSAGLSIILFTVLVRLVLLPLTISQMRSMQRMQALQPE 61 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 ++ +++K++ +P Q +A+++L++ +N+NP +GC P+L+Q P+ +A++ + Sbjct: 62 VERIQKKYRDNP-QKANEAIMKLWRENNVNPASGCLPLLVQFPILYALFLALRTF----S 116 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + + WI DL A DP + I P++ ++ + QMK S Sbjct: 117 SGAFLWIPDLRARDP-------------------LSILPVLAGVTTYFQMKTSMTTVQPQ 157 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q +L MP + F SFPAGL +YW SN+ SIVQQ V+ + Sbjct: 158 QRTMLVLMPAMLTFFAWSFPAGLALYWVTSNLFSIVQQVVLNR 200 >gi|218515055|ref|ZP_03511895.1| putative inner membrane protein translocase component YidC [Rhizobium etli 8C-3] Length = 162 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 79/135 (58%), Positives = 105/135 (77%), Gaps = 1/135 (0%) Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 NMK +QPK++EL+ KF LQ+A +QLYK INP+AGCWP+ LQIP+FF++YKVI Sbjct: 1 NMKRMQPKMEELKAKFGD-DRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVI 59 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 I++EMRHAPF+GWI+DL+A DPT I LFG+LPF P F+H+G+WP+IM ++MF+QM+M Sbjct: 60 YITIEMRHAPFFGWIQDLSAPDPTTIVNLFGLLPFTAPTFLHLGVWPLIMGVTMFLQMRM 119 Query: 508 SPPPADKGQAMILNW 522 +P P D QAMI Sbjct: 120 NPTPPDPTQAMIFKL 134 >gi|21222290|ref|NP_628069.1| putative inner membrane protein translocase component YidC [Streptomyces coelicolor A3(2)] gi|38502851|sp|O54569|OXAA_STRCO RecName: Full=Membrane protein oxaA gi|6539748|gb|AAF16008.1|AF187159_8 Orf431 [Streptomyces coelicolor A3(2)] gi|2898107|gb|AAC03487.1| inner membrane protein [Streptomyces coelicolor A3(2)] gi|4808379|emb|CAB42700.1| putative membrane protein [Streptomyces coelicolor A3(2)] Length = 431 Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 24/262 (9%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 D F + + + + + +G++I+ + +++ PL KQ Sbjct: 2 DTIASLFSFITWPVSWVIVQFHTVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQI 61 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +T M+ +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+ Sbjct: 62 KATRGMQTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFAL 120 Query: 444 YKVISI-------------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 Y V++ LE LAA + + + Sbjct: 121 YHVLNGIASGDTIGKINQPLLESAQKAHIFGAP-LAAKFTDGASKVESLGASLTDVRVIT 179 Query: 491 GIWPIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 + ++MS S F + P + Q M++ PV+F +FP G+++Y Sbjct: 180 AVMIVLMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVY 239 Query: 542 WSWSNVISIVQQAVIMKMHGAE 563 W +NV ++ QQ +++ + Sbjct: 240 WLTTNVWTMGQQMYVIRNNPTP 261 >gi|256786609|ref|ZP_05525040.1| putative inner membrane protein translocase component YidC [Streptomyces lividans TK24] gi|289770501|ref|ZP_06529879.1| membrane protein oxaA [Streptomyces lividans TK24] gi|289700700|gb|EFD68129.1| membrane protein oxaA [Streptomyces lividans TK24] Length = 431 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 24/262 (9%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 D F + + + + + +G++I+ + +++ PL KQ Sbjct: 2 DTIASLFSFITWPVSWVIVQFHTVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQI 61 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +T M+ +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+ Sbjct: 62 KATRGMQTLQPEMKKIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFAL 120 Query: 444 YKVISI-------------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 Y V++ LE LAA + + + Sbjct: 121 YHVLNGIASGDTIGKINQPLLESAQKAHIFGAP-LAAKFTDGASKVESLGASLTDVRVIT 179 Query: 491 GIWPIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 + ++MS S F + P + Q M++ PV+F +FP G+++Y Sbjct: 180 AVMIVLMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVY 239 Query: 542 WSWSNVISIVQQAVIMKMHGAE 563 W +NV ++ QQ +++ + Sbjct: 240 WLTTNVWTMGQQMYVIRNNPTP 261 >gi|313902790|ref|ZP_07836187.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter subterraneus DSM 13965] gi|313466910|gb|EFR62427.1| membrane protein insertase, YidC/Oxa1 family [Thermaerobacter subterraneus DSM 13965] Length = 219 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 24/224 (10%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + + + G+ G++I+L TV V+L+ PL Q S M+ +QP+ Sbjct: 2 SQLWQWFVDLIEAGLELSRSATGSAGLSIILFTVLVRLVLLPLTFSQTRSMQRMQALQPE 61 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 ++ +++K+K +P Q +A++QL++ +N+NP AGC P+L+Q P+ +A++ Sbjct: 62 VERIQKKYKNNP-QKANEAIMQLWRENNVNPAAGCLPLLIQFPILYALFIAFRDF----S 116 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + WI DL DP + P++ ++ + QMK S Sbjct: 117 IGSFLWIPDLGKPDPWF-------------------VLPVLAGVTTYFQMKTSMTTVQPQ 157 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q +L MP + F SFPAGL +YW SN+ SIVQQ ++ + Sbjct: 158 QRTMLVLMPAMLTFFAWSFPAGLALYWVTSNIFSIVQQVLMNRR 201 >gi|284034939|ref|YP_003384870.1| 60 kDa inner membrane insertion protein [Kribbella flavida DSM 17836] gi|283814232|gb|ADB36071.1| 60 kDa inner membrane insertion protein [Kribbella flavida DSM 17836] Length = 412 Score = 155 bits (390), Expect = 3e-35, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 115/248 (46%), Gaps = 38/248 (15%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 + ++I T+ ++ L PL +Q S+ NM+ +QPK+ EL++K+ + L + M++ Sbjct: 52 WAWALSIAGLTIVIRTLLIPLFVRQIRSSRNMQLLQPKMKELQKKY-GHDREKLGQEMMK 110 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISL--------------EMRHAPFWGWIK 463 LYK NP + C P+LLQ PVF A+++V+ + +RHA +G Sbjct: 111 LYKETGTNPFSSCLPLLLQSPVFLALFRVLDGASKGEAHSSIIAPHVNSLRHAKIFG--- 167 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVG--IWPIIMSLSMFIQM----KMSPP------P 511 I F + + + I+M+ +MFI + + P Sbjct: 168 -------AEISQTFLRANGDGSTNVKIVAIVLIILMTATMFITQLQLMRKNMPKEALEGQ 220 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-IGLIDRL 570 A + Q ++L P+ F+ +FP G++IYW SNV ++ QQ +++ + A D + Sbjct: 221 AAQMQKIMLYVFPIFFLIGGFNFPIGVLIYWFVSNVWTMGQQFYVIRRNPAPGTPAFDAM 280 Query: 571 RSTFSKNY 578 + ++ Sbjct: 281 EARKREHN 288 >gi|55980412|ref|YP_143709.1| hypothetical protein TTHA0443 [Thermus thermophilus HB8] gi|55771825|dbj|BAD70266.1| putative membrane protein [Thermus thermophilus HB8] Length = 430 Score = 154 bits (388), Expect = 5e-35, Method: Composition-based stats. Identities = 70/222 (31%), Positives = 118/222 (53%), Gaps = 26/222 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + ++ + +M Y GN+G+AI+ T+ V+LL +PL +Q+ S A ++ +QP I + Sbjct: 228 WGQLSLGLLWIMEAAYRFTGNWGLAILFLTLVVRLLLWPLMHQQFKSMAEIQRLQPLIQK 287 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + EK+K P + +A ++LY+ H +NP AGC P+L+Q+P+ F ++KVI+ E Sbjct: 288 INEKYKDDPNKR-AEATMKLYQEHRVNPAAGCLPLLIQMPILFILWKVIAN-YEFGQ--G 343 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQA 517 + WI DLA DP I P++ S F+ +S D + Sbjct: 344 FLWIPDLALPDPYY-------------------ILPVLYVASTFLSTWLSAHGNRDLIRQ 384 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +M ++FVF + FP+G+ +YW S +I +VQQ +I K Sbjct: 385 S--LFMNLIFVFLVLQFPSGVTLYWVLSTLIGLVQQWLINKS 424 >gi|296131544|ref|YP_003638794.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas flavigena DSM 20109] gi|296023359|gb|ADG76595.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas flavigena DSM 20109] Length = 384 Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats. Identities = 65/275 (23%), Positives = 125/275 (45%), Gaps = 27/275 (9%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F +++ W + +G++I+ + +++L PL KQ ++ M Sbjct: 9 FPLMVVVAWIMVRFHELLTWAGLDATSGAAWGLSIVGLVIVMRILLIPLFFKQIKASRGM 68 Query: 390 KNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + +QP++ L++K+K + + + M++LY+ H NP A C PILLQ P+FFA+++ Sbjct: 69 QLVQPEMQALQKKYKGKSDPASREAMSREMMELYRKHGTNPFASCLPILLQSPIFFALFR 128 Query: 446 VISISLEMR-----HAPFWGWIK-DLAAA-DPTNIFTLFGILPF-----YLPGFMHVGIW 493 V+ + A G + +LAA + I+ F + + I Sbjct: 129 VLFELPRLAAGTYERADAIGPMTRELAAQAEAATIWGAPLSGTFLKADGNVHIQIVTVIL 188 Query: 494 PIIMSLSMFIQMKM----SPPP-----ADKGQAMILNWM-PVVFVFALSSFPAGLIIYWS 543 I MS++ F + + PP Q IL +M P++F F+ +FP G+++YW+ Sbjct: 189 IIAMSVTTFTTQRQLTMKNMPPAALEGPMAQQQKILLYMLPLIFAFSGVNFPIGVLLYWT 248 Query: 544 WSNVISIVQQAVIMKMHGAE-IGLIDRLRSTFSKN 577 +N+ S+ QQ ++ A L+ ++ Sbjct: 249 TTNLWSMGQQFYTIRRMPAPGSEAEKALKERQARK 283 >gi|46198383|ref|YP_004050.1| hypothetical protein TTC0075 [Thermus thermophilus HB27] gi|46196005|gb|AAS80423.1| probable membrane protein [Thermus thermophilus HB27] Length = 430 Score = 153 bits (387), Expect = 6e-35, Method: Composition-based stats. Identities = 70/222 (31%), Positives = 118/222 (53%), Gaps = 26/222 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + ++ + +M Y GN+G+AI+ T+ V+LL +PL +Q+ S A ++ +QP I + Sbjct: 228 WGQLSLGLLWIMEAAYRFTGNWGLAILFLTLVVRLLLWPLMHQQFKSMAEIQRLQPLIQK 287 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + EK+K P + +A ++LY+ H +NP AGC P+L+Q+P+ F ++KVI+ E Sbjct: 288 INEKYKDDPNKR-AEATMKLYQEHRVNPAAGCLPLLIQMPILFILWKVIAN-YEFGQ--G 343 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQA 517 + WI DLA DP I P++ S F+ +S D + Sbjct: 344 FLWIPDLALPDPYY-------------------ILPVLYVASTFLSTWLSAHGNRDLIRQ 384 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +M ++FVF + FP+G+ +YW S +I +VQQ +I K Sbjct: 385 S--LFMNLIFVFLVLQFPSGVTLYWVLSTLIGLVQQWLINKS 424 >gi|290959008|ref|YP_003490190.1| hypothetical protein SCAB_45861 [Streptomyces scabiei 87.22] gi|260648534|emb|CBG71645.1| putative membrane protein [Streptomyces scabiei 87.22] Length = 421 Score = 153 bits (385), Expect = 8e-35, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 24/247 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + +G++I+ + +++ PL KQ +T M+ +QP++ + Sbjct: 17 WVIVQFHTVYGAVFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKK 76 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI----------- 447 ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+ Sbjct: 77 IQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNSIANNDTIGV 135 Query: 448 --SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 LE LAA + + + + + ++MS S F Sbjct: 136 INQSLLESAQKAHIFGAP-LAAKFTDSTADVVALDASLTTVRIVTAVMIVLMSASQFYTQ 194 Query: 506 KMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + P + Q M++ PV+F +FP G+++YW +NV ++ QQ + Sbjct: 195 RQLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254 Query: 557 MKMHGAE 563 + + Sbjct: 255 IHNNPTP 261 >gi|294668108|ref|ZP_06733215.1| membrane protein insertase, YidC/Oxa1 family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309816|gb|EFE51059.1| membrane protein insertase, YidC/Oxa1 family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 150 Score = 153 bits (385), Expect = 8e-35, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 19/142 (13%) Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y++ INPL GC P+LLQIP+F +Y I S+E+R AP+ GWI DL+ DP Sbjct: 11 YRSEKINPLGGCLPMLLQIPIFIGLYWAIFSSVELRQAPWLGWITDLSRHDPWF------ 64 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 I P++M+ +M+ Q ++PPP D QA ++ MP VF F FPAGL Sbjct: 65 -------------ILPVLMTATMWFQTTLNPPPTDPMQAKMMKIMPFVFSFMFFLFPAGL 111 Query: 539 IIYWSWSNVISIVQQAVIMKMH 560 ++Y+ +N+++I QQ + + Sbjct: 112 VLYYVVNNLLTIAQQWYVNRST 133 >gi|297158787|gb|ADI08499.1| putative inner membrane protein translocase component YidC [Streptomyces bingchenggensis BCW-1] Length = 387 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 111/250 (44%), Gaps = 30/250 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + F + + + +G++I+ V +++ PL KQ +T NM+ +QPK+ Sbjct: 14 WIIVQFHAFYSLIFDRDSGWAWGLSIVSLVVLIRICLIPLFVKQIKATRNMQALQPKMKA 73 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++E++ +S Q + M++LYK NPL+ C PIL Q P F ++Y+V++ R F Sbjct: 74 IQERY-KSDRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFISLYQVLNHIANNRTVGF 132 Query: 459 WGWIKDLAAADPTNIFTLFG----------------ILPFYLPGFMHVGIWPIIMSLSMF 502 D + D +FG + + + ++MS S F Sbjct: 133 I----DQSLLDSARSAHIFGAPLSVKFMSSASKVESLGASLTDVRVVTIVMIVLMSASQF 188 Query: 503 IQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + P + Q M++ PV+F +FP G+++YW +NV ++ QQ Sbjct: 189 FTQRQLMTKNVDLTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQ 248 Query: 554 AVIMKMHGAE 563 +++ + Sbjct: 249 MFVIRRNPTP 258 >gi|225434998|ref|XP_002284077.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 455 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 28/272 (10%) Query: 337 GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ M +++ ++ +G AI+L TV VK+ +PL KKQ ST M+ Sbjct: 101 GWFGFISEGMEVVLKVLEDGLTAVHVPYAYGFAIILLTVIVKIATYPLTKKQVESTLAMQ 160 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449 N+QPKI ++E++K + + +Q +LYK +NPLAGC+P L IPV+ +Y+ +S Sbjct: 161 NLQPKIKAIQERYKGN-QERIQLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 219 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-----------IWPIIMS 498 + E + WI L + + +P + P+++ Sbjct: 220 ANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLIPFVDGHPPLGWQDTAAYLVLPVLLV 279 Query: 499 LSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +S ++ M++ PP D Q + ++P++ + S P+GL IYW +NV+S QQ Sbjct: 280 ISQYVSMELMKPPQTDDPSQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 339 Query: 554 AVIMKMHGAEI----GLIDRLRSTFSKNYNSQ 581 + K+ GA+ + + +K SQ Sbjct: 340 VWLRKLGGAKPVVNEDASGIITAGRAKRSASQ 371 >gi|227536313|ref|ZP_03966362.1| inner membrane protein translocase component YidC [Sphingobacterium spiritivorum ATCC 33300] gi|227243828|gb|EEI93843.1| inner membrane protein translocase component YidC [Sphingobacterium spiritivorum ATCC 33300] Length = 389 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 72/363 (19%), Positives = 152/363 (41%), Gaps = 16/363 (4%) Query: 222 AVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDG 281 ++ + + + +W+ Y++S+ + + Sbjct: 16 SIYYKTAENNVDHLKESGDDDDQLDKRLTWIAFKQHYFSSILTSKTGFASADLDVKTAAE 75 Query: 282 HARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF 341 + + ++ K + F G ++ + + + WG + Sbjct: 76 ADIVKLYSAKAKLDFSNQKDNQYSFNFFFGPNKYNILKAQNDGSNSI---INMGWGPMRW 132 Query: 342 IAKPMF-MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 I + + + ++ ++GI I++ T+ +K + FPL K Y S A M+ ++P++DE++ Sbjct: 133 INQWITVPVFNFLDGFHMSYGIVILILTILLKGVLFPLTYKSYQSMAKMRVLKPQLDEIK 192 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 K + +LQ+ ++LYK +NPL GC P++LQ+P A + E+R + Sbjct: 193 AKVGEDNAVLLQQEQMKLYKQAGVNPLGGCLPLVLQMPFTIAFFYFFPNLFELRGES-FL 251 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-- 518 W+KDL+ D F + HV + ++M+L+ + + + M Sbjct: 252 WVKDLSTYDSPITFPAIFGI-------DHVSLMCVLMTLTTLLTTWYNNATSGATGQMKY 304 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I +MP++F F L+SFPAGL Y+ V + + Q +I + + ++ ++ K Sbjct: 305 IGYFMPLIFFFVLNSFPAGLNYYYFLGAVFTFLTQLLI-RSFVDDDKILAKIEEN-KKRP 362 Query: 579 NSQ 581 S+ Sbjct: 363 ESE 365 >gi|302836307|ref|XP_002949714.1| inner membrane ALBINO3-like protein 2, chloroplast precursor [Volvox carteri f. nagariensis] gi|300265073|gb|EFJ49266.1| inner membrane ALBINO3-like protein 2, chloroplast precursor [Volvox carteri f. nagariensis] Length = 413 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 16/231 (6%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ ++G AI+ TV VKL FPL +KQ ST +++ +QP++ EL+ K P + Sbjct: 100 HVPYSYGFAIITLTVLVKLATFPLTQKQVESTLSLQALQPRVKELQAKHADDPETLQL-E 158 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLAAADPTN- 472 ++YK +NPLAGC P L IPVF +Y +S + + WI L+ Sbjct: 159 TARMYKEAGVNPLAGCLPTLATIPVFIGLYNALSNAAKAGLLTEGFFWIPSLSGPTTIGG 218 Query: 473 -IFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAM---ILN 521 + LF G P + P+++ S + K+ + D Q IL Sbjct: 219 GLEWLFPFQDGAPPVGWANAAAYLVMPVLLVASQYASQKIISTTQNSNDPAQQQSQAILK 278 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 ++P++ + + P+GL +YW +N++S QQ + ++ + + +++ Sbjct: 279 FLPLMIGWFSLNVPSGLTLYWFVNNLLSTAQQLYL--KATVKVNVPESIKA 327 >gi|329938642|ref|ZP_08288038.1| Inner membrane protein translocase component YidC, long form [Streptomyces griseoaurantiacus M045] gi|329302133|gb|EGG46025.1| Inner membrane protein translocase component YidC, long form [Streptomyces griseoaurantiacus M045] Length = 443 Score = 152 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 28/249 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + +G++I+ + +++ PL KQ +T M+ +QP++ + Sbjct: 17 WVIVQFHTVYGAIFGADTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKK 76 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ + Sbjct: 77 IQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNG---IATGKT 132 Query: 459 WGWIKD--LAAADPTNIFTLFGILPFYLPG-------------FMHVGIWPIIMSLSMFI 503 G I D LA+A +IF F + + ++MS S F Sbjct: 133 IGVINDDLLASARKAHIFGAPLAAKFMDSSDKVEALGATLTDVRVVTAVMIVLMSFSQFY 192 Query: 504 QMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 + P + Q M++ PV+F +FP G+++YW +NV ++ QQ Sbjct: 193 TQRQLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQM 252 Query: 555 VIMKMHGAE 563 +++ + Sbjct: 253 YVIRNNPTP 261 >gi|269797065|ref|YP_003316520.1| preprotein translocase subunit YidC [Sanguibacter keddieii DSM 10542] gi|269099250|gb|ACZ23686.1| preprotein translocase subunit YidC [Sanguibacter keddieii DSM 10542] Length = 365 Score = 152 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 124/268 (46%), Gaps = 25/268 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W F+ +F+ + + ++I+ + ++ + PL KQ ++ M+ +QP++ Sbjct: 14 WIMFLCHKLFVFIGLPDGAGVAWILSIVGLVIVIRTIMIPLFFKQIRASRGMQMVQPELQ 73 Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS--L 451 +++K+K + + + + LYK H NP A C P+LLQ PVFFA+++V++ + Sbjct: 74 AIQKKYKNKKDPASREAMSRETMALYKKHGTNPFASCLPVLLQAPVFFALFRVLNSLRGI 133 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGIL--------PFYLPGFMHVGIWPIIMSLSMFI 503 G I D A A +LFG P L + G+ + M+ + F+ Sbjct: 134 ADGTKSGIGPI-DQAVAQAAETSSLFGAPLSSTFLHEPTDLNTKIVAGVLIVSMAATQFL 192 Query: 504 QMK----MSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + + P P + Q ++L +PV+ + +FP G++IYW+ +N+ S+ QQ Sbjct: 193 TQRQLTMKNMPKAALEGPMMQTQKIMLYMLPVIMAVSGVNFPVGVLIYWTTTNLWSMGQQ 252 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 ++ A +RL + ++ Sbjct: 253 FYTIRKMPAPGSEAERLLNERKARKAAR 280 >gi|226530665|ref|NP_001150593.1| inner membrane protein ALBINO3 [Zea mays] gi|195640414|gb|ACG39675.1| inner membrane protein ALBINO3 [Zea mays] Length = 449 Score = 152 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 77/275 (28%), Positives = 136/275 (49%), Gaps = 28/275 (10%) Query: 334 IDWGWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + GWF FI++ + +++ ++ ++G AI+L T+ VK PL KKQ ST Sbjct: 98 KNSGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVESTL 157 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+N+QP+I +++++ + + +Q +LYK +NPLAGC+P L IPV+ +Y+ + Sbjct: 158 AMQNLQPQIKAIQQRYAGN-QERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQAL 216 Query: 448 SI-SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPI 495 S + E + WI L + I LF G P + + P+ Sbjct: 217 SNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGITWLFPFVDGHPPLGWHDTICYLVLPV 276 Query: 496 IMSLSMFIQMKMSPPPA--DKGQAMIL---NWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ S ++ M++ PP D Q + ++P + + S P+GL IYW +NV+S Sbjct: 277 LLVASQYVSMEIMKPPQSDDPSQKNTMLILKFLPFMIGWFSLSVPSGLSIYWFTNNVLST 336 Query: 551 VQQAVIMKMHGAEIGLID----RLRSTFSKNYNSQ 581 QQ + KM GA+ + + + + +K N+Q Sbjct: 337 AQQVWLRKMGGAKPVVTEGGSGIITAGRAKRSNAQ 371 >gi|29830855|ref|NP_825489.1| putative inner membrane protein translocase component YidC [Streptomyces avermitilis MA-4680] gi|34098400|sp|P59811|OXAA_STRAW RecName: Full=Membrane protein oxaA gi|29607968|dbj|BAC72024.1| putative preprotein translocase YidC subunit [Streptomyces avermitilis MA-4680] Length = 428 Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats. Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 26/229 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 +G++I+ + +++ PL KQ +T M+ +QP++ +++E++K Q + M++ Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDK-QRQSEEMMK 94 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEM---------RHAPFWGWIK 463 LYK NPL+ C PIL Q P FFA+Y V++ ++ + R A +G Sbjct: 95 LYKESGTNPLSSCLPILAQSPFFFALYHVLNGIATGKTIGVIDDQLLASARKAHIFG--A 152 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PADK 514 LAA + + + + + I ++MS S F + P + Sbjct: 153 PLAAKFTDSADKVTQLGATLMDVRVVTAIMIVLMSASQFYTQRQLMTKNVDTTVKTPFMQ 212 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q M++ PV+F +FP G+++YW +NV ++ QQ +++ + Sbjct: 213 QQKMLMYVFPVMFAIFGINFPVGVLVYWLTTNVWTMGQQMYVIRNNPTP 261 >gi|239980791|ref|ZP_04703315.1| putative inner membrane protein translocase component YidC [Streptomyces albus J1074] Length = 414 Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 24/228 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 +G++I+ + +++ PL KQ +T M+ +QP++ +++E++K Q + M++ Sbjct: 19 WAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKKIQERYKNDK-QRQSEEMMK 77 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI-------------SLEMRHAPFWGWIKD 464 LYK NPLA C PILLQ P FFA+Y V++ L Sbjct: 78 LYKDAGTNPLASCLPILLQSPFFFALYHVLNSIASNKTIGFIDEALLASAQKAHIVGAP- 136 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PADKG 515 LAA N + + + + ++MS S F + P + Sbjct: 137 LAAKFTDNADKIEALGSSTTNVHIVTAVMIVLMSASQFFTQRQLMTKNVDTTVKTPFMQQ 196 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q M++ P++F +FP G+++YW +N+ ++ QQ +++ + Sbjct: 197 QKMLMYVFPIMFAVFGINFPVGVLVYWLTTNMWTMGQQMYVIRQNPTP 244 >gi|194702082|gb|ACF85125.1| unknown [Zea mays] Length = 455 Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats. Identities = 77/275 (28%), Positives = 136/275 (49%), Gaps = 28/275 (10%) Query: 334 IDWGWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + GWF FI++ + +++ ++ ++G AI+L T+ VK PL KKQ ST Sbjct: 102 KNSGWFGFISEALEVVLKVLKDGLSAVHVPYSYGFAIILLTIIVKAATLPLTKKQVESTL 161 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+N+QP+I +++++ + + +Q +LYK +NPLAGC+P L IPV+ +Y+ + Sbjct: 162 AMQNLQPQIKAIQQRYAGN-QERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQAL 220 Query: 448 SI-SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPI 495 S + E + WI L + I LF G P + + P+ Sbjct: 221 SNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGITWLFPFVDGHPPLGWHDTICYLVLPV 280 Query: 496 IMSLSMFIQMKMSPPPA--DKGQAMIL---NWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ S ++ M++ PP D Q + ++P + + S P+GL IYW +NV+S Sbjct: 281 LLVASQYVSMEIMKPPQSDDPSQKNTMLILKFLPFMIGWFSLSVPSGLSIYWFTNNVLST 340 Query: 551 VQQAVIMKMHGAEIGLID----RLRSTFSKNYNSQ 581 QQ + KM GA+ + + + + +K N+Q Sbjct: 341 AQQVWLRKMGGAKPVVTEGGSGIITAGRAKRSNAQ 375 >gi|125569047|gb|EAZ10562.1| hypothetical protein OsJ_00395 [Oryza sativa Japonica Group] Length = 952 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 22/248 (8%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ ++G AI+L TV VK PL K+Q ST M+N+QP+I +++++ + + +Q Sbjct: 599 HVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPQIKAIQQRYAGN-QERIQLE 657 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNI 473 +LYK +NPLAGC+P L IPV+ +Y+ +S + E + WI L Sbjct: 658 TARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAA 717 Query: 474 FTLFGILPFYLPGF-----------MHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518 + + LP + + P+++ S F+ M++ PP D Q Sbjct: 718 RQSGAGISWLLPFVDGHPPLGWHDTICYLVLPVLLVASQFVSMEIMKPPQTDDPSQKNTL 777 Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI----DRLRST 573 +L ++P + + S P+GL IYW +N++S QQ + K+ GA+ + + + Sbjct: 778 LVLKFLPFMIGWFSLSVPSGLSIYWFTNNILSTAQQVWLRKLGGAKPVVNQGGSGIITAG 837 Query: 574 FSKNYNSQ 581 +K ++Q Sbjct: 838 RAKRTSAQ 845 >gi|318058974|ref|ZP_07977697.1| putative inner membrane protein translocase component YidC [Streptomyces sp. SA3_actG] gi|318077328|ref|ZP_07984660.1| putative inner membrane protein translocase component YidC [Streptomyces sp. SA3_actF] Length = 447 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 34/258 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 WF FI P+ ++ F+ L +G++I+ + +++ PL KQ +T Sbjct: 5 ASWFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKAT 64 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ +QP++ ++E++K Q + M++LYK NPL+ C PIL+Q P FFA+Y V Sbjct: 65 RAMQTLQPEMKRIQERYKSDK-QRQSEEMMKLYKESGTNPLSSCLPILVQSPFFFALYHV 123 Query: 447 ISISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFY----------LPGFMHVGIWP 494 + + G I D L +A +IF F + Sbjct: 124 LDG---IASNKKIGVINDKLLDSAQQAHIFGAPLAAKFTSGADSLGADLTTVRIVTACMI 180 Query: 495 IIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MS S F + P + Q M++ PV+F +FP G+++YW + Sbjct: 181 VMMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLLYWLTT 240 Query: 546 NVISIVQQAVIMKMHGAE 563 NV ++ QQ +++ + Sbjct: 241 NVWTMGQQMFVIRQNPTP 258 >gi|302520509|ref|ZP_07272851.1| membrane protein oxaA [Streptomyces sp. SPB78] gi|302429404|gb|EFL01220.1| membrane protein oxaA [Streptomyces sp. SPB78] Length = 447 Score = 151 bits (380), Expect = 4e-34, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 34/258 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 WF FI P+ ++ F+ L +G++I+ + +++ PL KQ +T Sbjct: 5 ASWFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKAT 64 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ +QP++ ++E++K Q + M++LYK NPL+ C PIL+Q P FFA+Y V Sbjct: 65 RAMQTLQPEMKRIQERYKSDK-QRQSEEMMKLYKESGTNPLSSCLPILVQSPFFFALYHV 123 Query: 447 ISISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFY----------LPGFMHVGIWP 494 + + G I D L +A +IF F + Sbjct: 124 LDG---IASNKKIGVINDKLLDSAQQAHIFGAPLAAKFTSGADSLGADLTTVRIVTACMI 180 Query: 495 IIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MS S F + P + Q M++ PV+F +FP G+++YW + Sbjct: 181 VMMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLLYWLTT 240 Query: 546 NVISIVQQAVIMKMHGAE 563 NV ++ QQ +++ + Sbjct: 241 NVWTMGQQMFVIRQNPTP 258 >gi|328883706|emb|CCA56945.1| Inner membrane protein translocase component YidC, long form [Streptomyces venezuelae ATCC 10712] Length = 441 Score = 150 bits (379), Expect = 5e-34, Method: Composition-based stats. Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 26/248 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + +G++I+ V +++ PL KQ ST NM+ +QPK+ Sbjct: 17 WVIVQFHKVYGAIFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQALQPKMKA 76 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEM 453 ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S ++ + Sbjct: 77 IQERYKSDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSSIASGKTIGV 135 Query: 454 ---------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 R A +G LA+ + + + + I ++MS S F Sbjct: 136 IDDSLLASARQAHIFG--APLASKFTDSAAEVAALDASLTSVRIVTAIMIVLMSASQFFT 193 Query: 505 MKMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + P + Q M++ PV+F +FP G+++YW +NV ++ QQ Sbjct: 194 QRQLMMKNVDLSVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMY 253 Query: 556 IMKMHGAE 563 ++ + Sbjct: 254 VINQNPTP 261 >gi|269958144|ref|YP_003327933.1| 60 kDa inner membrane insertion protein [Xylanimonas cellulosilytica DSM 15894] gi|269306825|gb|ACZ32375.1| 60 kDa inner membrane insertion protein [Xylanimonas cellulosilytica DSM 15894] Length = 314 Score = 150 bits (379), Expect = 5e-34, Method: Composition-based stats. Identities = 68/268 (25%), Positives = 127/268 (47%), Gaps = 25/268 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W + A +F + + + +AI+ T+ ++ PL KQ ++ M+ IQP++ Sbjct: 17 WVMYGAHWVFARLGFGDGPGFAWVLAIVALTLIMRAAMIPLFVKQIKASRGMQIIQPELQ 76 Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +++K+K + + + ++LYK H NP A C PILLQ P+FFA+++V+S ++ Sbjct: 77 AVQKKYKGKSDPASREAMTRETMELYKKHGTNPFASCLPILLQSPIFFALFRVLSNLQQI 136 Query: 454 RHA--PFWGWIKDLAAADPTNIFTLFG-------ILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + G I D A A +LFG + + V + I+MS + F+ Sbjct: 137 ANGEIGPIGPI-DQAVASDFEASSLFGAKLSEVFLQTDDTAARIVVIVLIILMSATTFLT 195 Query: 505 MKM----SPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 + + P P Q M+L +P++F + +FP G++IYW+ +N+ S+ QQ Sbjct: 196 QRQLTMKNMPKAALEGPMASTQKMMLYVLPLIFAVSGVNFPVGVLIYWTVTNIWSMGQQF 255 Query: 555 VIMKMHGAE-IGLIDRLRSTFSKNYNSQ 581 +K A L+ ++ ++ Sbjct: 256 YTIKRMPAPGSEAERTLKERQARKAAAK 283 >gi|302559670|ref|ZP_07312012.1| membrane protein OxaA [Streptomyces griseoflavus Tu4000] gi|302477288|gb|EFL40381.1| membrane protein OxaA [Streptomyces griseoflavus Tu4000] Length = 424 Score = 150 bits (379), Expect = 5e-34, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 24/247 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + +G++I+ + +++ PL KQ +T M+ +QP++ + Sbjct: 17 WVIVQFHSVYGAVFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKK 76 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--------- 449 ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 77 IQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNSIASNDTIGV 135 Query: 450 ----SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 LE LAA + + + + I ++MSLS F Sbjct: 136 INTRLLESAQKAHIFGAP-LAAKFTDSSAKVEALNSSLTDVRVVTAIMIVLMSLSQFYTQ 194 Query: 506 KMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + P + Q M++ PV+F +FP G+++YW +NV ++ QQ + Sbjct: 195 RQLMTKNVDTTVKTPFMQQQKMLMYVFPVIFAVFGINFPVGVLVYWLTTNVWTMGQQMYV 254 Query: 557 MKMHGAE 563 + + Sbjct: 255 IHNNPTP 261 >gi|255076059|ref|XP_002501704.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299] gi|226516968|gb|ACO62962.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299] Length = 480 Score = 150 bits (379), Expect = 5e-34, Method: Composition-based stats. Identities = 68/236 (28%), Positives = 105/236 (44%), Gaps = 21/236 (8%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 ++G AI+ TV VK++ FPL KKQ + M+ IQP++ EL+ + P+ LQ + Sbjct: 140 YSYGYAILALTVLVKVVTFPLTKKQVEGSLQMQAIQPRVKELQAMYAN-DPERLQMETAR 198 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS-LEMRHAPFWGWIKDLAAA-------D 469 LYK N NPLAGC P +PVF +Y+ +S + +E + WI L D Sbjct: 199 LYKEANFNPLAGCLPTFATLPVFIGLYRALSNAAVEGELTDGFYWIPSLGGPTSIEARND 258 Query: 470 PTNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPA---DKGQAM--- 518 LF G P + + P+++ S I K M+P D Q Sbjct: 259 GNGFAWLFPFVDGAPPLGWHDTIAYLVLPVLLVASQLISQKVMTPDQPKSDDPAQQQSQA 318 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 IL ++P + F + PAGL +YW +N+ S Q + + + + Sbjct: 319 ILKFLPFMIGFFSLNVPAGLTLYWFANNIFSTAQTVYL-RKTTKAPEMPAAVAGGM 373 >gi|302552691|ref|ZP_07305033.1| membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302470309|gb|EFL33402.1| membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 428 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 110/246 (44%), Gaps = 22/246 (8%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + +G++I+ + +++ PL KQ ST M+ +QP++ + Sbjct: 17 WVIVQFHSVYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKSTRAMQTLQPEMKK 76 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEM 453 ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ ++ + Sbjct: 77 IQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNGIATGDTIGV 135 Query: 454 RHAPFWGWIK-------DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + LAA + + + + I ++MS S F + Sbjct: 136 INQSLLQSAQKAHIVGAPLAAKFTDSSSKVEALGASLTDVRVVTAIMIVLMSASQFFTQR 195 Query: 507 MSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P + Q M++ PV+F +FP G+++YW +NV ++ QQ ++ Sbjct: 196 QLMTKNVDTTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMYVI 255 Query: 558 KMHGAE 563 + + Sbjct: 256 RNNPTP 261 >gi|291452650|ref|ZP_06592040.1| membrane protein oxaA [Streptomyces albus J1074] gi|291355599|gb|EFE82501.1| membrane protein oxaA [Streptomyces albus J1074] Length = 431 Score = 150 bits (378), Expect = 6e-34, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 33/259 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 F FI P+ ++ F+ L +G++I+ + +++ PL KQ +T Sbjct: 5 ASLFSFITTPVSWVIVQFHKLYGALFGDDTGWAWGLSIVSLVILIRICLIPLFVKQIKAT 64 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ +QP++ +++E++K Q + M++LYK NPLA C PILLQ P FFA+Y V Sbjct: 65 RAMQTLQPEMKKIQERYKNDK-QRQSEEMMKLYKDAGTNPLASCLPILLQSPFFFALYHV 123 Query: 447 ISI-------------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 ++ L LAA N + + + + Sbjct: 124 LNSIASNKTIGFIDEALLASAQKAHIVGAP-LAAKFTDNADKIEALGSSTTNVHIVTAVM 182 Query: 494 PIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 ++MS S F + P + Q M++ P++F +FP G+++YW Sbjct: 183 IVLMSASQFFTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLVYWLT 242 Query: 545 SNVISIVQQAVIMKMHGAE 563 +N+ ++ QQ +++ + Sbjct: 243 TNMWTMGQQMYVIRQNPTP 261 >gi|239942675|ref|ZP_04694612.1| putative inner membrane protein translocase component YidC [Streptomyces roseosporus NRRL 15998] gi|239989134|ref|ZP_04709798.1| putative inner membrane protein translocase component YidC [Streptomyces roseosporus NRRL 11379] gi|291446136|ref|ZP_06585526.1| membrane protein oxaA [Streptomyces roseosporus NRRL 15998] gi|291349083|gb|EFE75987.1| membrane protein oxaA [Streptomyces roseosporus NRRL 15998] Length = 421 Score = 150 bits (378), Expect = 6e-34, Method: Composition-based stats. Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 28/230 (12%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 +G++I+ V +++ PL KQ ST NM+ +QPK+ ++E++K Q + M++ Sbjct: 36 WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQVLQPKMKAIQERYKNDK-QRQSEEMMK 94 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM---------------RHAPFWGWI 462 LYK NPL+ C PIL Q P FFA+Y V+ S+ R A +G Sbjct: 95 LYKETGTNPLSSCLPILAQSPFFFALYHVL-SSIASGKKIGAINQDLLDSARQAHIFG-- 151 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PAD 513 LAA ++ + + + I ++MS S F + P Sbjct: 152 APLAAKFTDSVEKVTSLDASLTDVRIVTAIMIVLMSASQFFTQRQLMTKNVDLTVKTPYM 211 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + Q M++ PV+F +FP G+++YW +NV ++ QQ ++ + Sbjct: 212 QQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMYVINQNPTP 261 >gi|294630334|ref|ZP_06708894.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292833667|gb|EFF92016.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 432 Score = 150 bits (377), Expect = 7e-34, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 28/264 (10%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 D F + + + + + +G++I+ + +++ PL KQ Sbjct: 2 DTIASLFSFITWPVSWVIVQFHKVYGAIFGADTGWAWGLSIVSLVILIRICLIPLFVKQI 61 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +T M+ +QP++ +++E++K Q + M++LYK NPL+ C PIL Q P FFA+ Sbjct: 62 KATRAMQTLQPEMKKIQERYKNDK-QRQSEEMMKLYKEAGTNPLSSCLPILAQSPFFFAL 120 Query: 444 YKVISISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFYLPG-------------FM 488 Y V++ + G+I D LA+A +IF F + Sbjct: 121 YHVLNG---IASGNKIGYINDAQLASARQAHIFGAPLAAKFLDGADTVAKLGASLTDVRV 177 Query: 489 HVGIWPIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLI 539 + ++MS S F + P + Q M++ P++F F FP G++ Sbjct: 178 VTALMIVLMSASQFYTQRQLMTKNVDTTVKTPFMQQQKMLMYVFPIMFAFFGIRFPVGVL 237 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 +YW +NV ++ QQ ++ + Sbjct: 238 VYWLTTNVWTMGQQMYVIHNNPTP 261 >gi|124010502|ref|ZP_01695137.1| inner membrane protein OxaA [Microscilla marina ATCC 23134] gi|123982339|gb|EAY23887.1| inner membrane protein OxaA [Microscilla marina ATCC 23134] Length = 548 Score = 150 bits (377), Expect = 7e-34, Method: Composition-based stats. Identities = 98/503 (19%), Positives = 189/503 (37%), Gaps = 34/503 (6%) Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ Y + + L+ +N+K E N +L S I K + Sbjct: 3 LKNYKT---YDKKPLYLMDGTNSKIDLTVETSDNKQINLADLYFSTNAAAKIEVKNKAQS 59 Query: 154 TPIKLVFKNANNILFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212 KL I ++ D + + N++ + + K Sbjct: 60 VSFKLELAPNQYIEQIYSLKADGFELGYDLKFVGLENTLRRQSDVAFHWVNEMKRLEFDL 119 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 Q+ I K E+ + E+ W + K++ + I + Sbjct: 120 EQSRQKAKINYYLSKGDFEELSGLTAEYQQKRIKETLHWATFNQKFFTTGLIAKNKNFNA 179 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITT---TNFLFAGAKEFPTIHHYEKDLAIPR 329 + F + ++ I + G ++ + E + Sbjct: 180 AVFATEVKDPKSKTVEKHGEIDLLVGSNDIIAGKGQFSFYFGPNQYYILKKVEAESFSDN 239 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + +F + L ++ V N+G+ I+L ++ +K + FPL + Y S A M Sbjct: 240 VYLGYPV-VNWFAKYLVVPLFAFLEGFVSNYGVIIILLSLIIKSMLFPLTYRSYKSMAKM 298 Query: 390 K----NIQPKIDELREKFK------QSPPQVLQKAMIQLYKTHNINPL---AGCWPILLQ 436 K +QP++D +EK + + Q +LYK +P GC P+LLQ Sbjct: 299 KVINKYLQPRMDAFKEKHRKENGGKEPDMQTTSMHQQELYKKIGQSPFAAVQGCLPMLLQ 358 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 +P+ FA++ ++E+R P + W DL+ D ++ T LPF H+ I+ ++ Sbjct: 359 MPILFAMFMFFPSAIELRQQP-FLWASDLSVYD--HVITFSFNLPFLGN---HISIFTLL 412 Query: 497 MSLSMF---IQMKMSPPPADKGQA----MILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 MS+S + + A A +++ MP++F F L+S+P+GL Y+ N+I+ Sbjct: 413 MSISSIGITMTSNQNTATAGGPNAGMMKVMMYMMPIIFFFVLNSYPSGLSFYYLIQNLIT 472 Query: 550 IVQQAVIMKMHGAEIGLIDRLRS 572 + QQ +I + E + ++ Sbjct: 473 LGQQHLIKRYFVDEEKIEAKISK 495 >gi|326510231|dbj|BAJ87332.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326514202|dbj|BAJ92251.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326520860|dbj|BAJ92793.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 449 Score = 150 bits (377), Expect = 8e-34, Method: Composition-based stats. Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 28/272 (10%) Query: 337 GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M +++ ++ +G AI+L T+ VK PL K+Q ST M+ Sbjct: 98 GWFGFISDAMEVVLKILKDGLSAVHVPYAYGFAIILLTIVVKAATLPLTKQQVESTMAMQ 157 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449 N+QP++ ++ ++ + + +Q +LYK +NPLAGC P L IPV+ +Y+ +S Sbjct: 158 NLQPQLKAIQARYAGN-QERIQLETARLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNV 216 Query: 450 SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPIIMS 498 + E + WI L I LF G P + + P+++ Sbjct: 217 ANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPIGWHDTICYLVLPVLLV 276 Query: 499 LSMFIQMKMS--PPPADKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 S F+ M++ P D Q IL ++P + + S P+GL IYW +NV+S QQ Sbjct: 277 ASQFVSMEIMKPPQSTDPSQKNTQLILKFLPFMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 336 Query: 554 AVIMKMHGAEIGLID----RLRSTFSKNYNSQ 581 + K+ GA+ + + + + +K SQ Sbjct: 337 IWLRKLGGAKPAVNEGASGIITAGRAKRSGSQ 368 >gi|269836199|ref|YP_003318427.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus DSM 20745] gi|269785462|gb|ACZ37605.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus DSM 20745] Length = 332 Score = 150 bits (377), Expect = 8e-34, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 37/233 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + Y + G+ G+++++ T+ +K L PL K ST+ M+ IQPK+ E Sbjct: 4 WREFVGLIELGLGYIADYTGSAGLSVIIFTILIKTLLLPLTVKAVRSTSAMQEIQPKLKE 63 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L++K+ Q L + ++LY+ H INP AGC P+LLQ+P+ F +Y+ I + A Sbjct: 64 LQKKY-GKDRQRLSQETMKLYQEHGINPAAGCLPMLLQLPILFGLYEAIRS---LSQAGT 119 Query: 459 ------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511 + W+ LA+ DP I P++ L +Q KM+ P Sbjct: 120 GTWGEGFMWLPSLASTDPHY-------------------ILPVMAGLFQLVQTKMTRPAG 160 Query: 512 ----ADKGQAMI---LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 D Q M+ + +MP++ V FP+GL++YW+ S + S++QQ I Sbjct: 161 QGKITDPQQRMMNTMMTFMPLMVVAFGVKFPSGLVLYWTVSALYSVIQQWFIT 213 >gi|182437489|ref|YP_001825208.1| putative inner membrane protein translocase component YidC [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466005|dbj|BAG20525.1| putative membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 419 Score = 150 bits (377), Expect = 8e-34, Method: Composition-based stats. Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 28/230 (12%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 +G++I+ V +++ PL KQ ST NM+ +QPK+ ++E++K Q + M++ Sbjct: 36 WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQVLQPKMKAIQERYKNDK-QRQSEEMMK 94 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM---------------RHAPFWGWI 462 LYK NPL+ C PIL Q P FFA+Y V+ S+ R A +G Sbjct: 95 LYKETGTNPLSSCLPILAQSPFFFALYHVL-SSIASGKKIGAINQDLLDSARQAHIFG-- 151 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PAD 513 LAA ++ + + + I ++MS S F + P Sbjct: 152 APLAAKFTDSVEKVTSLDASLTDVRIVTAIMIVLMSASQFFTQRQLMTKNVDLTVKTPYM 211 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + Q M++ PV+F +FP G+++YW +NV ++ QQ ++ + Sbjct: 212 QQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMYVINQNPTP 261 >gi|218187535|gb|EEC69962.1| hypothetical protein OsI_00422 [Oryza sativa Indica Group] Length = 459 Score = 149 bits (376), Expect = 9e-34, Method: Composition-based stats. Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 22/248 (8%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ ++G AI+L TV VK PL K+Q ST M+N+QP+I +++++ + + +Q Sbjct: 132 HVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPQIKAIQQRYAGN-QERIQLE 190 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNI 473 +LYK +NPLAGC+P L IPV+ +Y+ +S + E + WI L Sbjct: 191 TARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAA 250 Query: 474 FTLFGILPFYLPGF-----------MHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518 + + LP + + P+++ S F+ M++ PP D Q Sbjct: 251 RQSGAGISWLLPFVDGHPPLGWHDTICYLVLPVLLVASQFVSMEIMKPPQTDDPSQKNTL 310 Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI----DRLRST 573 +L ++P + + S P+GL IYW +N++S QQ + K+ GA+ + + + Sbjct: 311 LVLKFLPFMIGWFSLSVPSGLSIYWFTNNILSTAQQVWLRKLGGAKPVVNQGGSGIITAG 370 Query: 574 FSKNYNSQ 581 +K ++Q Sbjct: 371 RAKRTSAQ 378 >gi|125546414|gb|EAY92553.1| hypothetical protein OsI_14293 [Oryza sativa Indica Group] Length = 533 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 68/241 (28%), Positives = 122/241 (50%), Gaps = 18/241 (7%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ +G AI+L TV VK FPL KKQ S M+++QP++ ++E++ + +Q Sbjct: 122 HVPYPYGFAIILLTVLVKAATFPLTKKQVESAIAMRSLQPQVKAIQERYAG-DQERIQLE 180 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTN- 472 +LYK ++PLAGC P L+ IPV+ +Y+ +S + E + WI LA Sbjct: 181 TARLYKLSGVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAA 240 Query: 473 ------IFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQA--- 517 I LF G P + + P+++ +S ++ ++ PP D Q Sbjct: 241 RQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQGAQ 300 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 ++ ++P++ + S P+GL +YW +N++S QQ + K+ GA+ + + + S+ KN Sbjct: 301 AVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYMISSLKKN 360 Query: 578 Y 578 Sbjct: 361 Q 361 >gi|239930179|ref|ZP_04687132.1| putative inner membrane protein translocase component YidC [Streptomyces ghanaensis ATCC 14672] gi|291438521|ref|ZP_06577911.1| membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291341416|gb|EFE68372.1| membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 421 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 24/247 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + +G++I+ + +++ PL KQ +T M+ +QP++ + Sbjct: 17 WVIVQFHSVYGAVFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKATRAMQTLQPEMKK 76 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--------- 449 ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V++ Sbjct: 77 IQERYKN-DRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLNSIASNDTIGV 135 Query: 450 ----SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 LE LAA + + + + I ++MSLS F Sbjct: 136 INERLLESAQKAHIFGAP-LAAKFTDSSEKVAALNSSLTDVRVVTAIMIVLMSLSQFYTQ 194 Query: 506 KMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + P + Q M++ P++F +FP G+++YW +NV ++ QQ I Sbjct: 195 RQLMTKNVDTTVKTPFMQQQKMLMYVFPIIFAVFGINFPVGVLVYWLTTNVWTMGQQMYI 254 Query: 557 MKMHGAE 563 + + Sbjct: 255 IHNNPTP 261 >gi|15226968|ref|NP_180446.1| ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] gi|38372238|sp|Q8LBP4|ALB3_ARATH RecName: Full=Inner membrane protein ALBINO3, chloroplastic; Flags: Precursor gi|2209332|gb|AAB61458.1| chloroplast membrane protein ALBINO3 [Arabidopsis thaliana] gi|3927828|gb|AAC79585.1| chloroplast membrane protein (ALBINO3) [Arabidopsis thaliana] gi|27311661|gb|AAO00796.1| chloroplast membrane protein (ALBINO3) [Arabidopsis thaliana] gi|30387561|gb|AAP31946.1| At2g28800 [Arabidopsis thaliana] gi|330253078|gb|AEC08172.1| inner membrane protein ALBINO3 [Arabidopsis thaliana] Length = 462 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 22/248 (8%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ +G AI+L T+ VK +PL K+Q ST M+N+QPKI +++++ + + +Q Sbjct: 135 HVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLE 193 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470 +LYK +NPLAGC P L IPV+ +Y+ +S + E + WI L Sbjct: 194 TSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIAA 253 Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518 + I LF G P + + P+++ S ++ M++ PP D Q Sbjct: 254 RQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTL 313 Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRST 573 + ++P++ + S P+GL IYW +NV+S QQ + K+ GA+ + + + + Sbjct: 314 LVFKFLPLMIGYFALSVPSGLSIYWLTNNVLSTAQQVYLRKLGGAKPNMDENASKIISAG 373 Query: 574 FSKNYNSQ 581 +K +Q Sbjct: 374 RAKRSIAQ 381 >gi|307105705|gb|EFN53953.1| hypothetical protein CHLNCDRAFT_25162 [Chlorella variabilis] Length = 423 Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 16/215 (7%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 ++G AI+L TV VK+ +PL K+Q ST +M+ +QP++ EL+ K+ P+ LQ + Sbjct: 122 YSYGFAIILLTVLVKVATYPLTKQQVESTLSMQAMQPRVKELQAKYAN-DPERLQVETAK 180 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAA-------D 469 +Y+T +NPLAGC P L IPVF +YK +S + E + WI LA D Sbjct: 181 MYQTAGVNPLAGCLPSLATIPVFIGLYKALSNVASEGLLTDGFFWIPSLAGPTTVNGGLD 240 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAM---ILNWM 523 + G + PI++ +S I K+ PP D Q IL ++ Sbjct: 241 WLFKWQ-DGAPLLGYGQTAAYLVLPILLVVSQAISQKVISPPQQSNDPAQQQTQAILKFL 299 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 P++ + + P+GL +YW +N+I+ QQ + + Sbjct: 300 PLMIGWFSLNVPSGLTLYWFTNNLITTAQQLYLRR 334 >gi|295697833|ref|YP_003591071.1| membrane protein insertase, YidC/Oxa1 family [Bacillus tusciae DSM 2912] gi|295413435|gb|ADG07927.1| membrane protein insertase, YidC/Oxa1 family [Bacillus tusciae DSM 2912] Length = 246 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 62/224 (27%), Positives = 113/224 (50%), Gaps = 21/224 (9%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W+ + F ++GIAI++ T+ ++L+ PL +Q + M+ +QP Sbjct: 33 RSTWWGAFVGWFSDGIDLFARWTHDYGIAILVVTILIRLITLPLWLRQMKYSKVMQEMQP 92 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 + +LR+K+ + + L + M++L++ +NPL+GC P L+Q+P+ +A+Y+ I S M Sbjct: 93 QFQKLRQKYGDNKEK-LNEEMVKLFQQTGVNPLSGCLPTLIQLPILWALYQAIR-SNAML 150 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 A + I L D I P++ +++ +IQ KM DK Sbjct: 151 QAHEFLGIWPLGQPDHYF-------------------ILPVLAAVTTYIQSKMMLTTNDK 191 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q MIL MP++ +F S P+ L +YW ++N+++I+Q K Sbjct: 192 QQQMILVMMPLMILFIAVSLPSALSLYWVYTNLLTIIQYYFFTK 235 >gi|330444486|ref|YP_004377472.1| 60 kDa inner membrane protein [Chlamydophila pecorum E58] gi|328807596|gb|AEB41769.1| 60 kDa inner membrane protein [Chlamydophila pecorum E58] Length = 714 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 87/375 (23%), Positives = 157/375 (41%), Gaps = 38/375 (10%) Query: 221 IAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 V L + K ++ + W+ S+ Y+ + P YL Sbjct: 331 YRVQSKGQLDKAKLPKMKTPLMFQRGAHPQWILNSNGYFGIILTPLTNIPTGFASLYLPG 390 Query: 281 GHARYQAKFSAN--------------EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 + + LP ++ ++ ++AG P++ +K Sbjct: 391 SVLPTRLTLLEPRNQAFPAAKYPGYETLMPLPKEAGSSKFLVYAGPLAEPSLKTLDKTFT 450 Query: 327 IPRFEMLIDWGWFY----------FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 E A +F++M +F L G++G++I+L TVF+KLL + Sbjct: 451 KENGENPQYLSCISLRGFLSFITAPFASLLFVIMKFFKALTGSWGLSIVLLTVFLKLLLY 510 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 PL S M+ + P I ++++K+ + P+ Q ++ LYK + +NP+ GC P+L+Q Sbjct: 511 PLNAWSIRSMRRMQKLSPYIQQIQQKY-KKEPRRAQMEVMALYKANKVNPITGCLPLLIQ 569 Query: 437 IPVFFAIYKVISISLEMRHAPFW-GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 +P A++ ++ S +R A + GWI +L A D + + F F + PI Sbjct: 570 LPFLIAMFDLLKSSFLLRGASLFPGWIDNLTAPDVLFSWQHP--IWFIGNEF---HVLPI 624 Query: 496 IMSLSMFIQMKMSPPPADKGQAMIL-------NWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I+ L MF+Q KM+ M ++F +FP+GL IYW S ++ Sbjct: 625 ILGLVMFVQQKMTNYNKQGQMTEQQRQQQTMGTVMAILFTAMFYNFPSGLNIYWLSSMIL 684 Query: 549 SIVQQAVIMKMHGAE 563 I+QQ V K+ ++ Sbjct: 685 GIIQQWVTNKVLDSK 699 >gi|212640679|ref|YP_002317199.1| OxaA-like protein precursor [Anoxybacillus flavithermus WK1] gi|212562159|gb|ACJ35214.1| Stage III sporulation protein J, essential for sigma-G activity [Anoxybacillus flavithermus WK1] Length = 255 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 29/241 (12%) Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 ++ P + Y + +++ N+G+ I++ T+ ++L PL +Q Sbjct: 21 SEVNQPITPESKGFWNEYIVYPLSWLITYMSELFGSNYGLGIIVVTILIRLAILPLMIQQ 80 Query: 383 YVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 ++ M+ +QP++ +LREK+ Q LQ+ + L++ H +NPLAGC P+ +Q+P+ Sbjct: 81 TRNSKAMQALQPELQKLREKYSSKDAQTQQKLQQETMLLFQKHGVNPLAGCLPLFIQMPI 140 Query: 440 FFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 Y I + E+ RH + W DL DP I P++ Sbjct: 141 LIGFYHAIMRTEEIARH--NFLWF-DLGEKDPFY-------------------ILPLVAG 178 Query: 499 LSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ FIQ KM + AM+L MP++ V +FPA L +YW N+ I Q Sbjct: 179 VTTFIQQKMMMAGTEQQNPQMAMMLWLMPIMVVVFAINFPAALSLYWVVGNLFMIAQTYF 238 Query: 556 I 556 I Sbjct: 239 I 239 >gi|297826255|ref|XP_002881010.1| hypothetical protein ARALYDRAFT_901831 [Arabidopsis lyrata subsp. lyrata] gi|297326849|gb|EFH57269.1| hypothetical protein ARALYDRAFT_901831 [Arabidopsis lyrata subsp. lyrata] Length = 458 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 22/248 (8%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ +G AI+L T+ VK +PL K+Q ST M+N+QPKI +++++ + + +Q Sbjct: 131 HVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLE 189 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470 +LYK +NPLAGC P L IPV+ +Y+ +S + E + WI L Sbjct: 190 TSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAA 249 Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518 + I LF G P + P+++ S ++ M++ PP D Q Sbjct: 250 RQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTL 309 Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRST 573 + ++P++ + S P+GL IYW +NV+S QQ + K+ GA+ + + + + Sbjct: 310 LVFKFLPLMIGYFALSVPSGLSIYWFTNNVLSTAQQVYLRKLGGAKPNMDENASKIISAG 369 Query: 574 FSKNYNSQ 581 +K +Q Sbjct: 370 RAKRSIAQ 377 >gi|297627570|ref|YP_003689333.1| hypothetical protein PFREUD_24190 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923335|emb|CBL57936.1| Conserved membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 355 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 66/257 (25%), Positives = 129/257 (50%), Gaps = 28/257 (10%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVST 386 Y+ + +L ++ N + +AI+L T F++LL PL KQ S+ Sbjct: 12 SAIMQPLYWAVSGLIVLFHKLFSFFMNPDSGLTWTLAIVLLTCFIRLLMMPLYAKQLNSS 71 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M++IQPK++EL++K+ S + L + ++LY +NP + C P+L+Q+P+F+A+++V Sbjct: 72 RAMQSIQPKVEELQKKY-GSDRERLGQETMKLYNEEGVNPASSCLPLLIQLPIFWALFRV 130 Query: 447 ISISLEMRHAPFWGWIK-------DLAAADPTNIFTLFGILPF---YLPGFMHVGIWPII 496 +S + R+ + W++ L+ AD P + I+ Sbjct: 131 LSSAASDRNVHGY-WLQRSPEITASLSHADLFGAKLSGTFWPLTGGFGATQGFALALAIL 189 Query: 497 MSLSMFIQM----KMSPPPADKG-----QAMILNWM-PVVFVFALSSFPAGLIIYWSWSN 546 M+ MF+Q K + PPA + Q ++ +M P++++F + P G+++YW +N Sbjct: 190 MTGLMFVQQLHMLKRNMPPAAQTGPMAQQQKMMLYMFPLMYLFGGMAMPIGVLLYWLATN 249 Query: 547 VISIVQQAVIMKMHGAE 563 + ++ QQ VI++ + Sbjct: 250 IWTMAQQYVIIRNYPTP 266 >gi|21592693|gb|AAM64642.1| chloroplast membrane protein ALBINO3 [Arabidopsis thaliana] Length = 462 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 70/248 (28%), Positives = 124/248 (50%), Gaps = 22/248 (8%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ +G AI+L T+ VK +PL K+Q ST M+N+QPKI +++++ + + +Q Sbjct: 135 HVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLE 193 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470 +LYK ++NPLAGC P L IPV+ +Y+ +S + E + WI L Sbjct: 194 TSRLYKQASVNPLAGCLPTLATIPVWIGLYQALSNLANEGLFTEGFFWIPSLGGPTSIAA 253 Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518 + I LF G P + + P+++ S ++ M++ PP D Q Sbjct: 254 RQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTL 313 Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRST 573 + ++P++ + S P+GL IYW +NV+S QQ + K+ GA+ + + + + Sbjct: 314 LVFKFLPLMIGYFALSVPSGLSIYWLTNNVLSTAQQVYLRKLGGAKPNMDENASKIISAG 373 Query: 574 FSKNYNSQ 581 +K +Q Sbjct: 374 RAKRSIAQ 381 >gi|38372239|sp|Q8LKI3|ALB32_CHLRE RecName: Full=Inner membrane ALBINO3-like protein 2, chloroplastic; Flags: Precursor gi|21361062|gb|AAM49792.1|AF514291_1 albino 3-like protein [Chlamydomonas reinhardtii] Length = 422 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 15/229 (6%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 + ++G AI+ TV VK+ FPL +KQ ST +++ +QP++ EL+ K+ P + Sbjct: 97 IPYSYGFAIIALTVLVKVATFPLTQKQVESTLSLQALQPRVKELQAKYADDPENLQL-ET 155 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLAAADP---- 470 +LYK +NPLAGC+P L IPVF +Y +S + E + WI L Sbjct: 156 ARLYKEAGVNPLAGCFPTLATIPVFIGLYNALSNAAKEGLLTEGFFWIPSLGGPTTIGGG 215 Query: 471 --TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--SPPPADKGQAM---ILNWM 523 + G P + P+++ S + K+ S D Q IL ++ Sbjct: 216 LEWLVPFENGAPPVGWANAAAYLVMPVLLVASQYASQKIISSQNNQDPSQQQAQAILKFL 275 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 P++ + + P+GL +YW +N++S QQ + ++ + + +++ Sbjct: 276 PLMIGWFSLNVPSGLTLYWFVNNLLSTGQQLYL--KATVKVNIPEAIKA 322 >gi|295837761|ref|ZP_06824694.1| membrane protein OxaA [Streptomyces sp. SPB74] gi|197698917|gb|EDY45850.1| membrane protein OxaA [Streptomyces sp. SPB74] Length = 434 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 34/258 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 WF FI P+ ++ F+ L +G++I+ + +++ PL KQ +T Sbjct: 5 ASWFSFITTPVSWVIVQFHTLYGWIFGPDTGWAWGLSIVSLVIIIRICLIPLFVKQIKAT 64 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ +QP++ ++E++K Q + M++LYK NPLA C PIL+Q P FFA+Y V Sbjct: 65 RAMQTLQPEMKRIQERYKSDK-QRQSEEMMKLYKESGTNPLASCLPILVQSPFFFALYHV 123 Query: 447 ISISLEMRHAPFWGWIKD--LAAADPTNIFTLFGILPFY----------LPGFMHVGIWP 494 + + G I D L +A +IF F + Sbjct: 124 LDG---IASNKKIGVINDKLLDSAQQAHIFGAPLAAKFTSGADSLGADLTTVRIVTACMI 180 Query: 495 IIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++MS S F + P + Q M++ P++F +FP G+++YW + Sbjct: 181 VMMSASQFFTQRQLMTKNVDTSVKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLLYWLTT 240 Query: 546 NVISIVQQAVIMKMHGAE 563 NV ++ QQ +++ + Sbjct: 241 NVWTMGQQMYVIRQNPTP 258 >gi|297746102|emb|CBI16158.3| unnamed protein product [Vitis vinifera] Length = 451 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 28/272 (10%) Query: 337 GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ M +++ ++ +G AI+L TV VK+ +PL KKQ ST M+ Sbjct: 97 GWFGFISEGMEVVLKVLEDGLTAVHVPYAYGFAIILLTVIVKIATYPLTKKQVESTLAMQ 156 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449 N+QPKI ++E++K + + +Q +LYK +NPLAGC+P L IPV+ +Y+ +S Sbjct: 157 NLQPKIKAIQERYKGN-QERIQLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNV 215 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-----------IWPIIMS 498 + E + WI L + + +P + P+++ Sbjct: 216 ANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLIPFVDGHPPLGWQDTAAYLVLPVLLV 275 Query: 499 LSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +S ++ M++ PP D Q + ++P++ + S P+GL IYW +NV+S QQ Sbjct: 276 ISQYVSMELMKPPQTDDPSQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 335 Query: 554 AVIMKMHGAEI----GLIDRLRSTFSKNYNSQ 581 + K+ GA+ + + +K SQ Sbjct: 336 VWLRKLGGAKPVVNEDASGIITAGRAKRSASQ 367 >gi|326778144|ref|ZP_08237409.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf. griseus XylebKG-1] gi|326658477|gb|EGE43323.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf. griseus XylebKG-1] Length = 419 Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats. Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 28/230 (12%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 +G++I+ V +++ PL KQ ST NM+ +QPK+ ++E++K Q + M++ Sbjct: 36 WAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQVLQPKMKAIQERYKNDK-QRQSEEMMK 94 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM---------------RHAPFWGWI 462 LYK NPL+ C PIL Q P FFA+Y V+ S+ R A +G Sbjct: 95 LYKETGTNPLSSCLPILAQSPFFFALYHVL-SSIASGKKIGAINQDLLDSARQAHIFG-- 151 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PAD 513 LAA ++ + + + I ++MS S F + P Sbjct: 152 APLAAKFTDSVEKVTSLDASLTDVRIVTAIMIVLMSASQFFTQRQLMTKNVDLTVKTPYM 211 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + Q M++ PV+F +FP G+++YW +NV ++ QQ ++ + Sbjct: 212 QQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMYVINQNPTP 261 >gi|111226214|ref|YP_717008.1| putative membrane protein oxaA [Frankia alni ACN14a] gi|111153746|emb|CAJ65504.1| putative Membrane protein oxaA [Frankia alni ACN14a] Length = 470 Score = 148 bits (372), Expect = 3e-33, Method: Composition-based stats. Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 31/235 (13%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + +++L + V++L FPL KQ S M+ +QP+I E+REK+ +Q+ ++ Sbjct: 29 FFAWAFSVVLLVIAVRVLIFPLFVKQVKSQRTMQMMQPRIKEIREKY-GHDKPRMQQEIM 87 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF--WGWIK----------- 463 L K H NPL GC PILLQIP+F +++ V + M P W Sbjct: 88 ALQKEHG-NPLLGCLPILLQIPLFISLFHVFTHLAPMNEGPNGALVWRPRVGLSADQVEQ 146 Query: 464 ---------DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---P 511 LA+ ++ + + + + ++M L+ F+ + P Sbjct: 147 IASAKVFGISLASEFGSDSDFVHFLGVNSTHVKILAVVLIVLMGLTTFMTQRQIMARTGP 206 Query: 512 ADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 D QA++ + P++ FP +++YW +N+ S+ QQ ++K Sbjct: 207 VDPQQAIVQKVLLYGSPLMLAIFGFRFPIAVLLYWLTTNLWSMGQQFFVIKRMPP 261 >gi|254391432|ref|ZP_05006634.1| membrane protein oxaA [Streptomyces clavuligerus ATCC 27064] gi|197705121|gb|EDY50933.1| membrane protein oxaA [Streptomyces clavuligerus ATCC 27064] Length = 415 Score = 148 bits (372), Expect = 3e-33, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 113/263 (42%), Gaps = 26/263 (9%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 D F + + + + + +G++I+ V +++ PL KQ Sbjct: 2 DTIASLFSFITTLVSWIIVQFHKLYGAMFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQI 61 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S NM+ +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+ Sbjct: 62 KSMRNMQALQPKMKAIQERYKN-DRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFAL 120 Query: 444 YKVISI-----SLEM---------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 Y V+S ++ + R A +G LAA + + + + Sbjct: 121 YYVLSNIASGKTVGVINESLLESARQAHIFG--APLAAKFMDSEAKVASLDASLTTVRIV 178 Query: 490 VGIWPIIMSLSMFIQMKMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + ++MS S F + P + Q M++ PV+F +FP G+++ Sbjct: 179 TAVMIVLMSASQFYTQRQLMQKNVDLSVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLV 238 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 YW +NV ++ QQ ++ + Sbjct: 239 YWLTTNVWTMGQQMYVINQNPTP 261 >gi|312200977|ref|YP_004021038.1| membrane protein insertase, YidC/Oxa1 family [Frankia sp. EuI1c] gi|311232313|gb|ADP85168.1| membrane protein insertase, YidC/Oxa1 family [Frankia sp. EuI1c] Length = 434 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 32/235 (13%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + ++ L V V++L FPL KQ S M+ +QP+I E+REK+ Q + + M+ Sbjct: 29 FFAWAFSVALLVVCVRILIFPLFVKQVKSQRTMQLMQPRIKEIREKY-GHDKQQMNQKMM 87 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---------------------ISLEMRH 455 +L K H NPL GC PI LQIP+F +++ V + ++E + Sbjct: 88 ELQKEHG-NPLLGCLPIFLQIPLFISLFHVFTHMAPVTKNGKLEWVDRVGLSGATIE-KI 145 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--- 512 A W L+ ++ L + + + + ++M+ + F + Sbjct: 146 AKAKIWGISLSTNFNSSKALLNELHADSVHIKIVCVVLILLMAATTFFTQRQIMARTGGT 205 Query: 513 -DKGQ---AMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 D Q I+ + P+ FP ++IYW +N+ S+ QQ ++K Sbjct: 206 VDPQQAIVQKIMLYGSPITLAVFGFRFPVAVLIYWLVTNLWSMGQQFFVIKRMPP 260 >gi|148905860|gb|ABR16092.1| unknown [Picea sitchensis] Length = 471 Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats. Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 22/250 (8%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++ +G AI+ TV VK+ FPL KKQ ST M+N+QPKI ++E++K + +Q Sbjct: 121 TVHVPYAYGFAIITLTVLVKIATFPLTKKQVESTLAMQNLQPKIKAIQERYKG-DQERIQ 179 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP- 470 +LYK +NPLAGC P L +PV+ +Y+ +S + E + WI LA Sbjct: 180 LETSRLYKQAGVNPLAGCLPTLATMPVWIGLYQALSNVANEGLLTEGFFWIPSLAGPTTI 239 Query: 471 ------TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQ-- 516 T I LF G P + P+++ S +I M++ P D Q Sbjct: 240 AARQNGTGISWLFPFVDGQPPLGWSDTFAYLVLPVLLVGSQYISMQIMQTPQANDPSQKN 299 Query: 517 -AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI----GLIDRLR 571 + L ++P++ + S P+GL IYW +N +S QQ + K+ GA+ + Sbjct: 300 TQIALKFLPLMIGYFSLSVPSGLSIYWLTNNFLSTAQQLWLRKLGGAKPIVSEDGNGIIS 359 Query: 572 STFSKNYNSQ 581 + +K +S+ Sbjct: 360 AGQAKRSSSK 369 >gi|239828709|ref|YP_002951333.1| OxaA-like protein precursor [Geobacillus sp. WCH70] gi|239809002|gb|ACS26067.1| 60 kDa inner membrane insertion protein [Geobacillus sp. WCH70] Length = 256 Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats. Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + + P + Y + +++ L GNFG++I++ T+F++LL P Sbjct: 18 LISGCTQINEPITPESKGFWNEYIVYPLSWLIKYVANALGGNFGLSIVIVTIFIRLLILP 77 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPIL 434 L +Q + M+ +QP+I +LREK+ Q LQ+ M+ L++ H +NP+AGC+PIL Sbjct: 78 LMIQQTKNAKAMQALQPEIQKLREKYSSKDMQTQQKLQQEMMLLFQKHGVNPMAGCFPIL 137 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ Y I + E+ + W DL DP I P Sbjct: 138 IQMPILIGFYHAIMRTREIA-EHNFLWF-DLGEKDPYF-------------------ILP 176 Query: 495 IIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 I+ ++ FIQ K+ + AM+L MPV+ V +FPA L +YW N+ SIV Sbjct: 177 IVAGITTFIQQKIMMAGAGQQNPQMAMMLWMMPVMIVIFAINFPAALSLYWVVGNIFSIV 236 Query: 552 QQAVI 556 Q I Sbjct: 237 QTYFI 241 >gi|320009746|gb|ADW04596.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces flavogriseus ATCC 33331] Length = 418 Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 35/260 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 F FI P+ ++ F+ L +G++I+ V +++ PL KQ ST Sbjct: 5 ASLFSFITTPVSWVIVQFHKLYGALFGDDTGWAWGLSIVSLVVLIRICLIPLFVKQIKST 64 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 NM+ +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V Sbjct: 65 RNMQVLQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHV 123 Query: 447 ISI-----SLEM---------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +S ++ + R A +G LAA + + + + I Sbjct: 124 LSAIASGKTIGVIDQPLLDSARQAHIFG--APLAAKFMDSEEKVSALGASLTDVRVVTAI 181 Query: 493 WPIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 ++MS S F + P + Q M++ PV+F +FP G+++YW Sbjct: 182 MIVMMSASQFFTQRQLMTKNVDLTVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWL 241 Query: 544 WSNVISIVQQAVIMKMHGAE 563 +NV ++ QQ ++ + Sbjct: 242 TTNVWTMGQQMYVINQNPTP 261 >gi|294813736|ref|ZP_06772379.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] gi|326442157|ref|ZP_08216891.1| putative inner membrane protein translocase component YidC [Streptomyces clavuligerus ATCC 27064] gi|294326335|gb|EFG07978.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 415 Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 26/248 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + +G++I+ V +++ PL KQ S NM+ +QPK+ Sbjct: 17 WIIVQFHKLYGAMFGPDTGWAWGLSIVSLVVLIRICLIPLFVKQIKSMRNMQALQPKMKA 76 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEM 453 ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S ++ + Sbjct: 77 IQERYKN-DRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYYVLSNIASGKTVGV 135 Query: 454 ---------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 R A +G LAA + + + + + ++MS S F Sbjct: 136 INESLLESARQAHIFG--APLAAKFMDSEAKVASLDASLTTVRIVTAVMIVLMSASQFYT 193 Query: 505 MKMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + P + Q M++ PV+F +FP G+++YW +NV ++ QQ Sbjct: 194 QRQLMQKNVDLSVKTPYMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMY 253 Query: 556 IMKMHGAE 563 ++ + Sbjct: 254 VINQNPTP 261 >gi|115434560|ref|NP_001042038.1| Os01g0151200 [Oryza sativa Japonica Group] gi|54290223|dbj|BAD61111.1| putative PPF-1 protein [Oryza sativa Japonica Group] gi|113531569|dbj|BAF03952.1| Os01g0151200 [Oryza sativa Japonica Group] Length = 459 Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats. Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 22/248 (8%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ ++G AI+L TV VK PL K+Q ST M+N+QP+I +++++ + + +Q Sbjct: 132 HVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPQIKAIQQRYAGN-QERIQLE 190 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNI 473 +LYK +NPLAGC+P L IPV+ +Y+ +S + E + WI L Sbjct: 191 TARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAA 250 Query: 474 FTLFGILPFYLPGF-----------MHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518 + + LP + + P+++ S F+ M++ PP D Q Sbjct: 251 RQSGAGISWLLPFVDGHPPLGWHDTICYLVLPVLLVASQFVSMEIMKPPQTDDPSQKNTL 310 Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI----DRLRST 573 +L ++P + + S P+GL IYW +N++S QQ + K+ GA+ + + + Sbjct: 311 LVLKFLPFMIGWFSLSVPSGLSIYWFTNNILSTAQQVWLRKLGGAKPVVNQGGSGIITAG 370 Query: 574 FSKNYNSQ 581 +K ++Q Sbjct: 371 RAKRTSAQ 378 >gi|224054791|ref|XP_002298365.1| inner membrane protein [Populus trichocarpa] gi|222845623|gb|EEE83170.1| inner membrane protein [Populus trichocarpa] Length = 451 Score = 147 bits (369), Expect = 6e-33, Method: Composition-based stats. Identities = 77/272 (28%), Positives = 132/272 (48%), Gaps = 28/272 (10%) Query: 337 GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI+ M ++ ++ +G AI+L T+ VK+ PL KKQ ST M+ Sbjct: 97 GWFGFISDGMEFVLKVLKDGLSSVHVPYAYGFAIILLTIAVKVATLPLTKKQVESTLAMQ 156 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449 N+QPKI +++++ + + +Q +LY+ +NPLAGC+P L IPV+ +Y+ +S Sbjct: 157 NLQPKIKAIQQRYAGN-QERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNV 215 Query: 450 SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPIIMS 498 + E + WI L + I LF G P + P+++ Sbjct: 216 ANEGVLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWHDTAAYLVLPVLLI 275 Query: 499 LSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 S ++ M++ PP D Q + ++P++ + S P+GL IYW +NV+S QQ Sbjct: 276 ASQYVSMEIMKPPQTDDPTQKNTLLVFKFLPIMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 335 Query: 554 AVIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581 + K+ GA+ + + + + +K SQ Sbjct: 336 VWLRKLGGAKPVVNENASGIITAGRAKRSASQ 367 >gi|226495803|ref|NP_001152272.1| LOC100285911 [Zea mays] gi|195654525|gb|ACG46730.1| inner membrane protein ALBINO3 [Zea mays] gi|223974117|gb|ACN31246.1| unknown [Zea mays] Length = 459 Score = 147 bits (369), Expect = 6e-33, Method: Composition-based stats. Identities = 71/248 (28%), Positives = 124/248 (50%), Gaps = 22/248 (8%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ ++G AI+L T+ VK PL KKQ ST M+N+QP++ +++++ + + +Q Sbjct: 131 HVPYSYGFAIILLTIIVKAATLPLTKKQVESTMAMQNLQPQLKAIQQRYAGN-QERIQLE 189 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470 +LY+ +NPLAGC+P L IPV+ +Y+ +S + E + WI L Sbjct: 190 TARLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAA 249 Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518 I LF G P + + P+++ S ++ M++ PP D Q Sbjct: 250 RQSGAGISWLFPFVDGHPPLGWYDTICYLVLPVLLVASQYVSMEIMKPPQSDDPSQKNTL 309 Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID----RLRST 573 +L ++P + + S P+GL IYW +NV+S QQ + KM GA+ + + + + Sbjct: 310 LVLKFLPFMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKMGGAKPVVSEGDRRIITAG 369 Query: 574 FSKNYNSQ 581 +K N+Q Sbjct: 370 RAKRSNAQ 377 >gi|148905926|gb|ABR16124.1| unknown [Picea sitchensis] Length = 471 Score = 147 bits (369), Expect = 7e-33, Method: Composition-based stats. Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 22/250 (8%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++ +G AI+ TV VK+ FPL KKQ ST M+N+QPKI ++E++K + +Q Sbjct: 121 TVHVPYAYGFAIITLTVLVKIATFPLTKKQVESTLAMQNLQPKIKAIQERYKG-DQERIQ 179 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP- 470 +LYK +NPLAGC P L +PV+ +Y+ +S + E + WI LA Sbjct: 180 LETSRLYKQAGVNPLAGCLPTLATMPVWIGLYQALSNVANEGLLTEGFFWIPSLAGPTTI 239 Query: 471 ------TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQ-- 516 T I LF G P + P+++ S +I M++ P D Q Sbjct: 240 AARQNGTGISWLFPFVDGQPPLGWSDTFAYLVLPVLLVGSQYISMQIMQTPQANDPSQKN 299 Query: 517 -AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI----GLIDRLR 571 + L ++P++ + S P+GL IYW +N +S QQ + K+ GA+ + Sbjct: 300 TQIALKFLPLMIGYFSLSVPSGLSIYWLTNNFLSTAQQLWLRKLGGAKPIVSEDGNGIIS 359 Query: 572 STFSKNYNSQ 581 + +K +S+ Sbjct: 360 AGQAKRSSSK 369 >gi|282863323|ref|ZP_06272382.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE] gi|282561658|gb|EFB67201.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE] Length = 423 Score = 147 bits (369), Expect = 7e-33, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 117/260 (45%), Gaps = 35/260 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 F FI P+ ++ F+ L +G++I+ V +++ PL KQ ST Sbjct: 5 ASLFSFITTPVSWVIVQFHKLYGAIFGDDTGWAWGLSIVSLVVLIRICLIPLFVKQIKST 64 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 NM+ +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V Sbjct: 65 RNMQVLQPKMKAIQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHV 123 Query: 447 ISI-----SLEM---------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +S ++ + R A +G LAA + + + + I Sbjct: 124 LSAIASGKTIGVIDQPLLDSARQAHIFG--APLAAKFMDSDDKVAALGASLTDVRVVTAI 181 Query: 493 WPIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 ++MS S F + P + Q M++ P++F +FP G+++YW Sbjct: 182 MIVMMSASQFFTQRQLMTKNVDLTVKTPYMQQQKMLMYIFPLIFAVMGINFPVGVLVYWL 241 Query: 544 WSNVISIVQQAVIMKMHGAE 563 +NV ++ QQ ++ + Sbjct: 242 TTNVWTMGQQMYVINQNPTP 261 >gi|108712061|gb|ABF99856.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza sativa Japonica Group] gi|222626153|gb|EEE60285.1| hypothetical protein OsJ_13341 [Oryza sativa Japonica Group] Length = 510 Score = 147 bits (369), Expect = 7e-33, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 121/243 (49%), Gaps = 18/243 (7%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ +G AI+L TV VK FPL KKQ S M+++QP++ ++E++ + +Q Sbjct: 122 HVPYPYGFAIILLTVLVKAATFPLTKKQVESAIAMRSLQPQVKAIQERYAG-DQERIQLE 180 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTN- 472 +LYK +++PLAGC P L+ IPV+ +Y+ +S + E + WI LA Sbjct: 181 TARLYKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAA 240 Query: 473 ------IFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQA--- 517 I LF G P + + P+++ +S ++ ++ PP D Q Sbjct: 241 RQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQGAQ 300 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 ++ ++P++ + S P+GL +YW +N++S QQ + K+ GA+ + + + + Sbjct: 301 AVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYIDKLAKEE 360 Query: 578 YNS 580 + Sbjct: 361 STN 363 >gi|41469653|gb|AAS07376.1| putative inner membrane protein (with alternative splicing) [Oryza sativa Japonica Group] gi|108712060|gb|ABF99855.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza sativa Japonica Group] Length = 489 Score = 147 bits (369), Expect = 7e-33, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 121/243 (49%), Gaps = 18/243 (7%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ +G AI+L TV VK FPL KKQ S M+++QP++ ++E++ + +Q Sbjct: 122 HVPYPYGFAIILLTVLVKAATFPLTKKQVESAIAMRSLQPQVKAIQERYAG-DQERIQLE 180 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTN- 472 +LYK +++PLAGC P L+ IPV+ +Y+ +S + E + WI LA Sbjct: 181 TARLYKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAA 240 Query: 473 ------IFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQA--- 517 I LF G P + + P+++ +S ++ ++ PP D Q Sbjct: 241 RQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQGAQ 300 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 ++ ++P++ + S P+GL +YW +N++S QQ + K+ GA+ + + + + Sbjct: 301 AVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYIDKLAKEE 360 Query: 578 YNS 580 + Sbjct: 361 STN 363 >gi|307330013|ref|ZP_07609165.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces violaceusniger Tu 4113] gi|306884389|gb|EFN15423.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces violaceusniger Tu 4113] Length = 379 Score = 147 bits (369), Expect = 7e-33, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 26/248 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + F + + + +G++I+ V +++ PL KQ ST NM+ +QPK+ Sbjct: 14 WIIVQFHSFYSLIFDRDSGWAWGLSIVSLVVLIRICLIPLFVKQIKSTRNMQALQPKMKA 73 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE------ 452 ++E++K Q + M++LYK NPL+ C PIL Q P F ++Y+V++ Sbjct: 74 IQERYKSDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFISLYQVLNHIANNKTVGV 132 Query: 453 --------MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 R+A +G + D + G + I I+MS S F Sbjct: 133 IDQNLLDSARNAHIFGAPLSVKFMDSASKVESLGASLTDVRIVTITMI--ILMSASQFFT 190 Query: 505 MKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + P + Q M++ PV+F +FP G+++YW +NV ++ QQ Sbjct: 191 QRQLMTKNVDLTVKTPFMQQQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTLGQQMF 250 Query: 556 IMKMHGAE 563 +++ + Sbjct: 251 VIRRNPTP 258 >gi|311032253|ref|ZP_07710343.1| OxaA-like protein precursor [Bacillus sp. m3-13] Length = 260 Score = 146 bits (368), Expect = 9e-33, Method: Composition-based stats. Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 27/225 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ L++YF L+ N +G++I++ T+ ++ PL KQ + M+ +QP++ Sbjct: 36 WNEYVVYPLSWLITYFAELMNNDYGLSIIIVTLLIRFAILPLMIKQTKNAKAMQALQPEM 95 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 LREK+ Q LQ+ + L++ H +NPLAGC+P+L+Q+P+ + I+ + E+ Sbjct: 96 KALREKYSSKDQKTQQKLQQETMGLFQKHGVNPLAGCFPLLVQMPILIGFFHAITRTTEI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + + W DL DP I P++ ++ FIQ K+ D Sbjct: 156 AN-HNFMWF-DLGDPDPYF-------------------ILPVVAGITTFIQQKIMMAGMD 194 Query: 514 KGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M++ MP++ V +FPA L +YW N+ IVQ I Sbjct: 195 NNPQMVMMLWIMPIMIVVFAINFPAALSLYWVVGNIFMIVQTYFI 239 >gi|218296522|ref|ZP_03497250.1| 60 kDa inner membrane insertion protein [Thermus aquaticus Y51MC23] gi|218243064|gb|EED09596.1| 60 kDa inner membrane insertion protein [Thermus aquaticus Y51MC23] Length = 430 Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 24/224 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + ++ + LM + G++G+AI+ T+ V+LL +PL +Q+ S A M+ +QP I + Sbjct: 228 WGQLSLGLLWLMEMAFRYTGSWGLAILFLTLVVRLLLWPLMHQQFKSMAEMQRLQPLIQK 287 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + EK+K P + +A ++LY+ H +NP AGC P+ +Q+P+ F ++KVI+ E Sbjct: 288 INEKYKDDPNKR-AEATMKLYQEHKVNPAAGCLPLFIQMPILFILWKVIAN-YEFGQ--G 343 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DLA DP I P++ S + +S +K Sbjct: 344 LLWIPDLALPDPYY-------------------ILPVLYVASTLLSTWLS-AHGNKDIIR 383 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ ++FVF + FPAG+ +YW SN+I + QQ +I K Sbjct: 384 QGLFINLIFVFLVLQFPAGVTLYWVLSNLIGLFQQWLINKSLKP 427 >gi|294668107|ref|ZP_06733214.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309815|gb|EFE51058.1| membrane protein insertase, YidC/Oxa1 family protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 409 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 80/417 (19%), Positives = 143/417 (34%), Gaps = 36/417 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ V A+S++I+ W+ + P+ ++ Q Sbjct: 1 MDI-KRMTVFFAVSLLILLGWEKIFPTPQPAVSAVQQAGQQQTS------------PTIP 47 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 LS + + + ++ I+ K L L Y + P L Y Sbjct: 48 AETGLSPAVPITVSTDTVNAVIDEKSGDLRSLTLLKYDSAEDQSKPFT--LFHDGKDGIY 105 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ D V A + + ++L AN I ++ + YL Sbjct: 106 VAQSDVVDAAGRSLTQGLSFQSAKKQYSLEGDKAEVRLTANTANGIQIDKIYTFTKGSYL 165 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHK--PQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 I VTN S IR RI+R P+ G + + K+ D+ Sbjct: 166 VGIRFDVTNRSGSPIRTDGSYRIVRDGKAPEGQGYFMANYTGPVLYTPQSGFQKVKFGDL 225 Query: 238 EKS-------SISNFHESNSWLGISDKYWASVFIPSKETSFHS------QFKYLSDGHAR 284 + + + W+G+S Y+ S +I + + Sbjct: 226 DDDFKEGREQAEYERKTQSGWVGMSQHYFFSSWILQPKGGQSVCTTDACRIDIKRRSDNL 285 Query: 285 YQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAK 344 Y A + + G L+AG + + + E++ D+G ++ A Sbjct: 286 YSAGVIVPQPELANGMKQGFGISLYAGPQTTSALGKIADN-----LELIKDYGRVHWPAT 340 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 +F LM + GN+G AI+L T+ VK++ FPL Y S A M+ + PK++ L+ Sbjct: 341 GLFWLMDKLHGFTGNWGWAIVLLTIIVKIVLFPLNNAAYKSMAKMRAVAPKLEALKN 397 >gi|149182294|ref|ZP_01860773.1| OxaA-like protein precursor [Bacillus sp. SG-1] gi|148849986|gb|EDL64157.1| OxaA-like protein precursor [Bacillus sp. SG-1] Length = 238 Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 27/239 (11%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 + P E + Y + +++ G++G+ I++ T+ ++L PL KQ Sbjct: 2 EYNQPITEDNTGFWNEYIVYPLSLLIIKVSEFFDGSYGLGIIIVTLIIRLAILPLMIKQT 61 Query: 384 VSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 ++ M+ +QP++ +LREK+ Q LQ+ + L++ H +NPLAGC+P+++Q+P+ Sbjct: 62 KNSKAMQALQPEMQKLREKYSSKDAQTQQKLQQETMGLFQKHGVNPLAGCFPLIVQMPIL 121 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 Y I + E+++ + W DL DP + P+I ++ Sbjct: 122 IGFYHAIVRTEEIKN-HTFLWF-DLGQPDPLY-------------------LLPLIAGVT 160 Query: 501 MFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 FIQ KM + AM+L MPV+ + +FPA L +YW N+ I+Q I Sbjct: 161 TFIQQKMMMAGTANQNPQMAMMLYIMPVMIIIFAINFPAALSLYWVVGNIFMIIQTYFI 219 >gi|38372402|sp|Q9FY06|PPF1_PEA RecName: Full=Inner membrane protein PPF-1, chloroplastic; AltName: Full=Post-floral-specific protein 1; Flags: Precursor gi|2231046|emb|CAA73179.1| PPF-1 protein [Pisum sativum] Length = 442 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 82/348 (23%), Positives = 146/348 (41%), Gaps = 35/348 (10%) Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 T S + S R K + + P +S++ + L + + D + Sbjct: 13 GTPLPSLHRTFSPNRTRLFTKVQFSFHQLPPIQSVSHSVDLSGIFARAEGLLYTLADATV 72 Query: 328 PRFEMLIDW-------GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLL 374 GWF FI+ M ++ ++ ++G AI+L TV VK Sbjct: 73 AADAAASTDVAAQKNGGWFGFISDGMEFVLKVLKDGLSSVHVPYSYGFAIILLTVIVKAA 132 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 PL K+Q ST M+N+QPKI ++E++ + + +Q +LY +NPLAGC P L Sbjct: 133 TLPLTKQQVESTLAMQNLQPKIKAIQERYAGN-QERIQLETSRLYTQAGVNPLAGCLPTL 191 Query: 435 LQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-- 491 IPV+ +Y+ +S + E + WI L + + P Sbjct: 192 ATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPLL 251 Query: 492 ---------IWPIIMSLSMFIQMKMS--PPPADKGQAM---ILNWMPVVFVFALSSFPAG 537 + P+++ +S ++ M++ P D Q I ++P++ + S P+G Sbjct: 252 GWYDTAAYLVLPVLLIVSQYVSMEIMKPPQTNDPNQKNTLLIFKFLPLMIGYFSLSVPSG 311 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581 L IYW +NV+S QQ + K+ GA+ + + + + +K S+ Sbjct: 312 LTIYWFTNNVLSTAQQVWLRKLGGAKPAVNENAGGIITAGQAKRSASK 359 >gi|310830139|ref|YP_003962496.1| 60 kDa inner membrane insertion protein [Eubacterium limosum KIST612] gi|308741873|gb|ADO39533.1| 60 kDa inner membrane insertion protein [Eubacterium limosum KIST612] Length = 307 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 68/246 (27%), Positives = 119/246 (48%), Gaps = 36/246 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + ++ YN V N+G+A++L T+ VK PL KQ S M+ +QP++ + Sbjct: 1 MHILYQAFGFVLFQIYNFVQNYGVAVILFTILVKFCILPLNIKQTKSMREMQALQPELQK 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY--------KVISIS 450 L++K+K +P + L + ++LYK +N++P+AGC P+L+Q+P+ +A++ V + Sbjct: 61 LQKKYKNNPEK-LNQETMKLYKLYNVSPMAGCLPLLIQLPIIYALFGALRDPGKWVFTNG 119 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + + WI DL DP I PI+ + FI K + Sbjct: 120 DVSAISQQFLWIPDLGNPDPWY-------------------ILPILCVVFTFITQKFTMS 160 Query: 511 ----PADK----GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 D Q M+L MP+ FA PAG+ +YW NV + VQQ ++++ Sbjct: 161 VQKGTMDPSAEKTQNMMLYIMPIFIGFAAIGMPAGVALYWVVQNVFTFVQQFIMLRKPAE 220 Query: 563 EIGLID 568 +I + Sbjct: 221 KIDPRE 226 >gi|302543969|ref|ZP_07296311.1| membrane protein OxaA [Streptomyces hygroscopicus ATCC 53653] gi|302461587|gb|EFL24680.1| membrane protein OxaA [Streptomyces himastatinicus ATCC 53653] Length = 378 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 26/248 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + F + + N +G++I+ V +++ PL KQ +T NM+ +QPK+ Sbjct: 14 WIIVQFHSFYSLIFDRNSGWAWGLSIVSLVVLIRICLIPLFVKQIKATRNMQALQPKMKA 73 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE------ 452 ++E++K Q + M++LYK NPL+ C PIL Q P F A+Y+V++ Sbjct: 74 IQERYKSDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFIALYQVLNHIANNKTVGV 132 Query: 453 --------MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 R+A +G + D + G + I ++MS S F Sbjct: 133 IDQSLLDSARNAHIFGAPLSVKFMDSASKVESLGASLTDVRVVTITMI--VLMSASQFFT 190 Query: 505 MKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + P + Q M++ P++F +FP G+++YW +NV ++ QQ Sbjct: 191 QRQLMTKNVDLSVKTPFMQQQKMLMYVFPIMFAVFGINFPVGVLVYWLTTNVWTLGQQMF 250 Query: 556 IMKMHGAE 563 +++ + Sbjct: 251 VIRRNPTP 258 >gi|297193299|ref|ZP_06910697.1| membrane protein oxaA [Streptomyces pristinaespiralis ATCC 25486] gi|197718384|gb|EDY62292.1| membrane protein oxaA [Streptomyces pristinaespiralis ATCC 25486] Length = 432 Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 37/261 (14%) Query: 336 WGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 F FI P+ ++ F+ L +G++I+ + +++ PL KQ ST Sbjct: 5 ASLFSFITTPVSWIIVQFHKLYGAIFGPDTGWAWGLSIVSLVILIRICLIPLFVKQIKST 64 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 NM+ +QPK+ ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V Sbjct: 65 RNMQALQPKMKAIQERYKN-DRQRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHV 123 Query: 447 IS--------------ISLEMRHAPFWG-WIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 +S + R+A +G I DP+ + L L + Sbjct: 124 LSKIASGNEIGVLNQSLVDSARNAHIFGAPIASKFMDDPSKVEALNASL---TDVRIVTA 180 Query: 492 IWPIIMSLSMFIQMKMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 I I+MS S F + P + Q M++ P++F +FP G+++YW Sbjct: 181 IMIILMSASQFYTQRQLMQKNVDLTVKTPYMQQQKMLMYIFPLIFAVMGINFPVGVLVYW 240 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 +NV ++ QQ ++ + Sbjct: 241 LTTNVWTMGQQMYVINQNPTP 261 >gi|297618524|ref|YP_003703683.1| membrane protein insertase, YidC/Oxa1 family [Syntrophothermus lipocalidus DSM 12680] gi|297146361|gb|ADI03118.1| membrane protein insertase, YidC/Oxa1 family [Syntrophothermus lipocalidus DSM 12680] Length = 259 Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 72/246 (29%), Positives = 120/246 (48%), Gaps = 28/246 (11%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + A + + + N+G AI+L T+ +KLL +PL KQ S M+ + Sbjct: 1 MWSSIVQGFADLIQGFYHITVAIGLPNYGFAIILVTIAIKLLLYPLTHKQMKSMRKMQEL 60 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---I 449 QP++ L+E++ + PQ +QK + LYK H ++PL+GC P+L+Q+P+ A Y+ + Sbjct: 61 QPRLKLLQERY-KEDPQRMQKEVFDLYKEHGVSPLSGCLPLLIQLPILVAFYRALYQLKY 119 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 ++ HA + W+ L+ DP F I+ ++ +IQ K+S Sbjct: 120 TV-PAHA-AFLWVPTLSKPDPYYGF-------------------AILAGVTTYIQQKLST 158 Query: 510 -PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM-KMHGAEIGLI 567 P D Q +L MPV + ++ PAGL +YW NV+SI QQA + + G + Sbjct: 159 LDPNDPSQKSMLYVMPVFIAWLAATLPAGLALYWVTFNVLSIAQQAWVNARSGGTKDSPD 218 Query: 568 DRLRST 573 R+ Sbjct: 219 GRVERG 224 >gi|30023510|ref|NP_835141.1| OxaA-like protein precursor [Bacillus cereus ATCC 14579] gi|229130732|ref|ZP_04259685.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-Cer4] gi|38502939|sp|Q814F4|OXAA1_BACCR RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|29899071|gb|AAP12342.1| 60 kDa inner membrane protein YIDC [Bacillus cereus ATCC 14579] gi|228652749|gb|EEL08634.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-Cer4] Length = 258 Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I + P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 17 IATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLP 76 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 77 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E++ + W DL ADP I P Sbjct: 137 VQMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPFY-------------------ILP 175 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235 Query: 552 QQAVI 556 Q I Sbjct: 236 QMYFI 240 >gi|302801394|ref|XP_002982453.1| hypothetical protein SELMODRAFT_12955 [Selaginella moellendorffii] gi|300149552|gb|EFJ16206.1| hypothetical protein SELMODRAFT_12955 [Selaginella moellendorffii] Length = 306 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 17/221 (7%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G AI+L TV VK+L FPL K Q ST +M+N+QPK+ +++++ + +Q +LY Sbjct: 65 YGFAIILLTVLVKVLTFPLTKSQAESTISMQNLQPKLKAIQQRYAG-DQERIQMETARLY 123 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP-------T 471 K +NPLAGC P L +PV+ +Y+ +S + E + + WI LA + Sbjct: 124 KQAGVNPLAGCLPTLATLPVWIGLYRALSNVANEGLLSEGFFWIPSLAGPTTIAARQSGS 183 Query: 472 NIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFI-QMKMSPPPADKGQAM---ILNWM 523 I LF G P + + P+++ S + M PP D Q IL ++ Sbjct: 184 GISWLFPFVDGHPPLGWGDTIAYLVLPVLLIGSQYASMQIMQPPQTDPSQKNTQLILKFL 243 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P++ + S P+GL +YW +N++S QQ + K+ GA+ Sbjct: 244 PLMIGYFALSVPSGLSLYWLTNNILSTGQQVWLRKLGGAKP 284 >gi|258517431|ref|YP_003193653.1| 60 kDa inner membrane insertion protein [Desulfotomaculum acetoxidans DSM 771] gi|257781136|gb|ACV65030.1| 60 kDa inner membrane insertion protein [Desulfotomaculum acetoxidans DSM 771] Length = 223 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 114/204 (55%), Gaps = 21/204 (10%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV-LQKAM 415 + N+G+AI+L TV +K+L +PL KKQ +S +M+ +QPKI EL+ K+K Q +Q+ Sbjct: 27 IPNYGLAIILLTVIIKMLLYPLTKKQMLSMRSMQQLQPKIKELQNKYKGKDQQQIMQQKT 86 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP-FWGWIKDLAAADPTNIF 474 ++LYK HNINP+AGC P+L+Q+P+ A+Y+ + + A + W+ +L+ DP Sbjct: 87 MELYKEHNINPMAGCLPLLIQMPILIALYRALYNFKYLNTAHANFLWVPNLSNVDPW--- 143 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 I PI+ S ++Q K++ +D Q ++L MP+ + Sbjct: 144 ----------------VILPILAGASTYLQSKLTTTTSDPTQQIMLYTMPLFIGYISYKM 187 Query: 535 PAGLIIYWSWSNVISIVQQAVIMK 558 PAGL +YW N++ +QQ I K Sbjct: 188 PAGLALYWVVFNLVGAIQQYYINK 211 >gi|56422031|ref|YP_149349.1| OxaA-like protein [Geobacillus kaustophilus HTA426] gi|261420905|ref|YP_003254587.1| OxaA-like protein precursor [Geobacillus sp. Y412MC61] gi|297531689|ref|YP_003672964.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. C56-T3] gi|319768575|ref|YP_004134076.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC52] gi|56381873|dbj|BAD77781.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426] gi|261377362|gb|ACX80105.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC61] gi|297254941|gb|ADI28387.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. C56-T3] gi|317113441|gb|ADU95933.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC52] Length = 254 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 28/226 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I P+ L+ Y L+G +FG++I++ T+ ++LL PL +Q + M+ +QP+I Sbjct: 36 WNEYIVYPLSWLIKYVAGLLGGSFGLSIIVVTILIRLLILPLMIQQTRNAKAMQALQPEI 95 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + LR+K+ Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+ Y I + E+ Sbjct: 96 EALRKKYSSKDAQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPILIGFYHAIMRTREI 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 + W DL DP I P+I ++ FIQ K+ Sbjct: 156 AQ-HNFLWF-DLGEKDPYY-------------------ILPVIAGVTTFIQQKIMMAGSA 194 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+L MP++ V +FPA L +YW N+ SIVQ +I Sbjct: 195 QQNPQMAMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIVQTYLI 240 >gi|169832372|ref|YP_001718354.1| 60 kDa inner membrane insertion protein [Candidatus Desulforudis audaxviator MP104C] gi|169639216|gb|ACA60722.1| 60 kDa inner membrane insertion protein [Candidatus Desulforudis audaxviator MP104C] Length = 300 Score = 144 bits (363), Expect = 4e-32, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 119/230 (51%), Gaps = 31/230 (13%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + ++GIAI+L T+ +K+ PL + Q S A M +QP+I +++++ + Q+ K ++ Sbjct: 25 LPSYGIAIVLLTILIKIFLHPLTRIQMRSMAKMSQLQPEIKAIQDRYGKDKQQMQTK-IM 83 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRHAPFWGWIKDLAAADPTNIF 474 +LYK +NP+AGC +L+Q+P A+Y+ + + HA + W+ DL DP Sbjct: 84 ELYKERKVNPMAGCLLLLVQLPFMIALYQALWNFDYVNPAHAG-FLWVADLKKTDPLY-- 140 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--------PPADKGQAMILNWMPVV 526 I P++ +++ F+Q K++ P ++ Q ++L MP+ Sbjct: 141 -----------------ILPVLAAVTTFVQFKLTMSVSKGGGNPSQEQMQKVMLTVMPLF 183 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 ++ PAGL +YW N++SIVQQ I K A+ +++ R ++ Sbjct: 184 IGGISATLPAGLSVYWVTFNLVSIVQQFFINKQILADQSAMEQQREKAAR 233 >gi|311070645|ref|YP_003975568.1| OxaA-like protein precursor [Bacillus atrophaeus 1942] gi|310871162|gb|ADP34637.1| OxaA-like protein precursor [Bacillus atrophaeus 1942] Length = 249 Score = 144 bits (362), Expect = 4e-32, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 27/246 (10%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + P + Y + ++ N+G++I++ TV ++LL Sbjct: 6 VLLAGCSSVKEPITANSPHFWDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTVLIRLLIL 65 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPI 433 PL KQ S+ M+ +QP++ +L+EK+ + Q+ + L+ H +NPLAGC+PI Sbjct: 66 PLMIKQLRSSKAMQALQPEMQKLKEKYSSKDQKTQQQLQQETMALFSKHGVNPLAGCFPI 125 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+ Y I + + + W DL DP I Sbjct: 126 LIQMPILIGFYHAIMRTQAI-SEHSFLWF-DLGEKDPYY-------------------IL 164 Query: 494 PIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 PI+ ++ F+Q K+ + AM+L MP++ + SFPA L +YW N+ I Sbjct: 165 PIVAGVATFVQQKLMMAGNATQNPQMAMMLWIMPIMIIVFAISFPAALSLYWVVGNLFMI 224 Query: 551 VQQAVI 556 Q +I Sbjct: 225 AQTFLI 230 >gi|228955736|ref|ZP_04117731.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229072951|ref|ZP_04206147.1| Membrane protein oxaA 1 [Bacillus cereus F65185] gi|229181732|ref|ZP_04309055.1| Membrane protein oxaA 1 [Bacillus cereus 172560W] gi|229193737|ref|ZP_04320678.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 10876] gi|228589762|gb|EEK47640.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 10876] gi|228601765|gb|EEK59263.1| Membrane protein oxaA 1 [Bacillus cereus 172560W] gi|228710197|gb|EEL62175.1| Membrane protein oxaA 1 [Bacillus cereus F65185] gi|228803964|gb|EEM50588.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 255 Score = 144 bits (362), Expect = 4e-32, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I + P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 17 IATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLP 76 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 77 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E++ + W DL ADP I P Sbjct: 137 IQMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPFY-------------------ILP 175 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235 Query: 552 QQAVI 556 Q I Sbjct: 236 QMYFI 240 >gi|309811342|ref|ZP_07705129.1| membrane protein insertase, YidC/Oxa1 family [Dermacoccus sp. Ellin185] gi|308434649|gb|EFP58494.1| membrane protein insertase, YidC/Oxa1 family [Dermacoccus sp. Ellin185] Length = 387 Score = 144 bits (362), Expect = 5e-32, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 116/275 (42%), Gaps = 25/275 (9%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E + + + + + ++I + +++L PL KQ ++ M Sbjct: 8 LEWFVAAIMVGWHKLFSLVGLPEASGWT--WALSIAGLVIVLRILLIPLFVKQIHASRRM 65 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + +QP++ +++ K+K Q+ M++LY+T NPL C PILLQ P FFA+++ Sbjct: 66 QLVQPEMQKIQAKYKGKKDPESRAKQQEEMMELYRTTGTNPLGSCLPILLQAPFFFALFR 125 Query: 446 VISIS---LEMRHAPFWGWIKDLAAADPTNIF------TLFGILPFYLPGFMHVGIWPII 496 V++ + RH + LA ++ F + + ++ Sbjct: 126 VLNNLSKIADGRHDEIGFLTRSLAGQAESSKLFGAKLSDTFMGTDGWGSAKWVAILLIVL 185 Query: 497 MSLSMFIQM----KMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 MS + FI + + P P K Q +I+ MP+ F + +FP G++IYW +N Sbjct: 186 MSATSFITQHQLMRRNMPKAALEGPMAKQQQIIIYLMPIFFAISGVNFPIGVLIYWFVTN 245 Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 V ++ QQ ++ ++ ++ + Sbjct: 246 VWTMGQQWFVIHRMPTPGSAAEKKLEERNRAKGRE 280 >gi|218232510|ref|YP_002370261.1| OxaA-like protein precursor [Bacillus cereus B4264] gi|228924231|ref|ZP_04087502.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228961750|ref|ZP_04123353.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229051155|ref|ZP_04194699.1| Membrane protein oxaA 1 [Bacillus cereus AH676] gi|229112899|ref|ZP_04242430.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-15] gi|229148036|ref|ZP_04276375.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST24] gi|229153645|ref|ZP_04281821.1| Membrane protein oxaA 1 [Bacillus cereus m1550] gi|296505914|ref|YP_003667614.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171] gi|218160467|gb|ACK60459.1| stage III sporulation protein J [Bacillus cereus B4264] gi|228629831|gb|EEK86484.1| Membrane protein oxaA 1 [Bacillus cereus m1550] gi|228635461|gb|EEK91952.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST24] gi|228670578|gb|EEL25891.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-15] gi|228722218|gb|EEL73619.1| Membrane protein oxaA 1 [Bacillus cereus AH676] gi|228797944|gb|EEM44954.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228835449|gb|EEM80819.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296326966|gb|ADH09894.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171] Length = 258 Score = 144 bits (362), Expect = 5e-32, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I ++ P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 17 ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFNSNYGLAIVVTTLIIRFALLP 76 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 77 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E++ + W DL ADP I P Sbjct: 137 IQMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPFY-------------------ILP 175 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235 Query: 552 QQAVI 556 Q I Sbjct: 236 QMYFI 240 >gi|297200935|ref|ZP_06918332.1| membrane protein [Streptomyces sviceus ATCC 29083] gi|197716893|gb|EDY60927.1| membrane protein [Streptomyces sviceus ATCC 29083] Length = 428 Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 +G++I+ + +++ PL KQ ST M+ +QP++ +++E++K Q + M++ Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKSTRAMQTLQPEMKKIQERYKNDK-QRQSEEMMK 94 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEM---------RHAPFWGWIK 463 LYK NPL+ C PIL Q P FFA+Y V++ ++ + R A +G Sbjct: 95 LYKETGTNPLSSCLPILAQSPFFFALYHVLNGIATGDTIGVINESLLASARKAHIFG--A 152 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PADK 514 LAA T+ + + + ++MS S F + P + Sbjct: 153 PLAAKFKDGSATVQALGATVTDVRVVTAVMIVMMSASQFYTQRQLMTKNVDTTVKTPFMQ 212 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q M++ PV+F +FP G+++YW +NV ++ QQ ++ + Sbjct: 213 QQKMLMYVFPVMFAVFGINFPVGVLVYWLTTNVWTMGQQMYVIHNNPTP 261 >gi|42784682|ref|NP_981929.1| OxaA-like protein precursor [Bacillus cereus ATCC 10987] gi|42740614|gb|AAS44537.1| stage III sporulation protein J [Bacillus cereus ATCC 10987] Length = 255 Score = 143 bits (361), Expect = 6e-32, Method: Composition-based stats. Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 27/258 (10%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 L A I ++ P YF+ ++ + N+G+AI Sbjct: 4 KIGLLAMVIALMAIATGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAI 63 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421 ++TT+ ++ PL KQ ST M+++QP++ +L+EK+ Q LQ+ M+QLY+ Sbjct: 64 VVTTLIIRFALLPLMIKQTKSTKAMQSLQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + +NPLAGC PI +Q+P+ FA Y I + E++ + W DL ADP Sbjct: 124 NGVNPLAGCLPIFIQMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPYY--------- 172 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538 I PI+ +++ FIQ K++ + AM++ MP++ + +FPA L Sbjct: 173 ----------ILPIVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAAL 222 Query: 539 IIYWSWSNVISIVQQAVI 556 +YW N+ I Q I Sbjct: 223 SLYWVVGNIFGIAQMYFI 240 >gi|172059050|ref|YP_001815510.1| 60 kDa inner membrane insertion protein [Exiguobacterium sibiricum 255-15] gi|171991571|gb|ACB62493.1| 60 kDa inner membrane insertion protein [Exiguobacterium sibiricum 255-15] Length = 284 Score = 143 bits (360), Expect = 7e-32, Method: Composition-based stats. Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 27/249 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ PM L+ + ++GI I++TT+ V+L+ PL KQ S M+ IQP++ Sbjct: 43 WKHYFVWPMAWLIREISHFFNGDYGIGIIVTTLLVRLVILPLMIKQTKSMGGMQVIQPEM 102 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LREK+ Q LQ+ M++LY+ HN+NPLAGC PIL+Q+P+ A Y I + + Sbjct: 103 VKLREKYSSKDQETQQKLQQEMMKLYQEHNVNPLAGCLPILIQMPILIAFYNAIIYTPAI 162 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + W DL DP I PI+ ++ ++Q K+S D Sbjct: 163 FQ-HTFLWF-DLGKPDPYF-------------------ILPILSAIFTYLQQKLSMAGQD 201 Query: 514 KG-QAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 Q I+ + P++ + P+ L +YW + SI+ IMK +I Sbjct: 202 DNPQMKIMLYVFPIMIFVMGVTLPSALSLYWVVGYIFSIIVTIAIMKPMREKIKAQTEAT 261 Query: 572 STFSKNYNS 580 + + Sbjct: 262 IASKREQEA 270 >gi|229099913|ref|ZP_04230836.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-29] gi|229118976|ref|ZP_04248321.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-3] gi|228664501|gb|EEL19997.1| Membrane protein oxaA 1 [Bacillus cereus Rock1-3] gi|228683528|gb|EEL37483.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-29] Length = 255 Score = 143 bits (360), Expect = 8e-32, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I ++ P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 17 ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFAELFGKNYGLAIVVTTLIIRFALLP 76 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK Q LQ+ M+QLY+ + INPLAGC PI Sbjct: 77 LMIKQTKSTKAMQALQPEMVKLKEKHSSKDQATQQKLQQEMMQLYQKNGINPLAGCLPIF 136 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 175 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM++ MP++ + +FPA L +YW N+ I Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235 Query: 552 QQAVI 556 Q I Sbjct: 236 QMYFI 240 >gi|30265504|ref|NP_847881.1| OxaA-like protein precursor [Bacillus anthracis str. Ames] gi|47778431|ref|YP_022422.2| OxaA-like protein precursor [Bacillus anthracis str. 'Ames Ancestor'] gi|49188323|ref|YP_031576.1| OxaA-like protein precursor [Bacillus anthracis str. Sterne] gi|49481123|ref|YP_039476.1| OxaA-like protein precursor [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52145294|ref|YP_086751.1| OxaA-like protein precursor [Bacillus cereus E33L] gi|65317467|ref|ZP_00390426.1| COG0706: Preprotein translocase subunit YidC [Bacillus anthracis str. A2012] gi|118480513|ref|YP_897664.1| OxaA-like protein precursor [Bacillus thuringiensis str. Al Hakam] gi|165873027|ref|ZP_02217648.1| stage III sporulation protein J [Bacillus anthracis str. A0488] gi|167635063|ref|ZP_02393380.1| stage III sporulation protein J [Bacillus anthracis str. A0442] gi|167641749|ref|ZP_02399992.1| stage III sporulation protein J [Bacillus anthracis str. A0193] gi|170689464|ref|ZP_02880654.1| stage III sporulation protein J [Bacillus anthracis str. A0465] gi|170707538|ref|ZP_02897991.1| stage III sporulation protein J [Bacillus anthracis str. A0389] gi|177655281|ref|ZP_02936835.1| stage III sporulation protein J [Bacillus anthracis str. A0174] gi|190569283|ref|ZP_03022177.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I] gi|196036094|ref|ZP_03103494.1| stage III sporulation protein J [Bacillus cereus W] gi|196041960|ref|ZP_03109247.1| stage III sporulation protein J [Bacillus cereus NVH0597-99] gi|196045495|ref|ZP_03112726.1| stage III sporulation protein J [Bacillus cereus 03BB108] gi|218906678|ref|YP_002454512.1| stage III sporulation protein J [Bacillus cereus AH820] gi|227818255|ref|YP_002818264.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684] gi|228918098|ref|ZP_04081626.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930492|ref|ZP_04093492.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936766|ref|ZP_04099557.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229124989|ref|ZP_04254163.1| Membrane protein oxaA 1 [Bacillus cereus 95/8201] gi|229187715|ref|ZP_04314851.1| Membrane protein oxaA 1 [Bacillus cereus BGSC 6E1] gi|229601905|ref|YP_002869695.1| stage III sporulation protein J [Bacillus anthracis str. A0248] gi|254687073|ref|ZP_05150931.1| OxaA-like protein precursor [Bacillus anthracis str. CNEVA-9066] gi|254735161|ref|ZP_05192871.1| OxaA-like protein precursor [Bacillus anthracis str. Western North America USA6153] gi|254742130|ref|ZP_05199817.1| OxaA-like protein precursor [Bacillus anthracis str. Kruger B] gi|254755960|ref|ZP_05207992.1| OxaA-like protein precursor [Bacillus anthracis str. Vollum] gi|254761360|ref|ZP_05213382.1| OxaA-like protein precursor [Bacillus anthracis str. Australia 94] gi|38502943|sp|Q81JH1|OXAA1_BACAN RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|30260182|gb|AAP29367.1| stage III sporulation protein J [Bacillus anthracis str. Ames] gi|47552136|gb|AAT34897.2| stage III sporulation protein J [Bacillus anthracis str. 'Ames Ancestor'] gi|49182250|gb|AAT57626.1| stage III sporulation protein J [Bacillus anthracis str. Sterne] gi|49332679|gb|AAT63325.1| stage III sporulation protein J [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978763|gb|AAU20313.1| stage III sporulation protein J [Bacillus cereus E33L] gi|118419738|gb|ABK88157.1| protein translocase subunit yidC [Bacillus thuringiensis str. Al Hakam] gi|164711239|gb|EDR16795.1| stage III sporulation protein J [Bacillus anthracis str. A0488] gi|167510303|gb|EDR85706.1| stage III sporulation protein J [Bacillus anthracis str. A0193] gi|167529537|gb|EDR92287.1| stage III sporulation protein J [Bacillus anthracis str. A0442] gi|170127534|gb|EDS96408.1| stage III sporulation protein J [Bacillus anthracis str. A0389] gi|170666566|gb|EDT17339.1| stage III sporulation protein J [Bacillus anthracis str. A0465] gi|172080208|gb|EDT65300.1| stage III sporulation protein J [Bacillus anthracis str. A0174] gi|190559590|gb|EDV13581.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I] gi|195991261|gb|EDX55229.1| stage III sporulation protein J [Bacillus cereus W] gi|196023702|gb|EDX62378.1| stage III sporulation protein J [Bacillus cereus 03BB108] gi|196027215|gb|EDX65835.1| stage III sporulation protein J [Bacillus cereus NVH0597-99] gi|218536479|gb|ACK88877.1| stage III sporulation protein J [Bacillus cereus AH820] gi|227003597|gb|ACP13340.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684] gi|228595783|gb|EEK53467.1| Membrane protein oxaA 1 [Bacillus cereus BGSC 6E1] gi|228658490|gb|EEL14156.1| Membrane protein oxaA 1 [Bacillus cereus 95/8201] gi|228822975|gb|EEM68816.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829211|gb|EEM74848.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841578|gb|EEM86694.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266313|gb|ACQ47950.1| stage III sporulation protein J [Bacillus anthracis str. A0248] Length = 255 Score = 143 bits (359), Expect = 9e-32, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I ++ P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 17 ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 77 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 175 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235 Query: 552 QQAVI 556 Q +I Sbjct: 236 QMYLI 240 >gi|254724144|ref|ZP_05185929.1| OxaA-like protein precursor [Bacillus anthracis str. A1055] Length = 255 Score = 143 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I ++ P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 17 ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QPK+ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 77 LMIKQTKSTKAMQALQPKMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 175 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235 Query: 552 QQAVI 556 Q +I Sbjct: 236 QMYLI 240 >gi|320449653|ref|YP_004201749.1| 60 kDa inner membrane insertion protein [Thermus scotoductus SA-01] gi|320149822|gb|ADW21200.1| 60 kDa inner membrane insertion protein [Thermus scotoductus SA-01] Length = 431 Score = 143 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 24/224 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + ++ + LM + G++G+AI+ T+ V+LL +PL +Q+ S A M+ +QP I + Sbjct: 229 WGQLSLGLLWLMEVAFRHTGSWGLAILFLTLVVRLLLWPLMHQQFKSMAEMQRLQPLIQK 288 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + EK+K P + +A ++LY+ H +NP AGC P+ +Q+P+ F ++KVI+ E Sbjct: 289 INEKYKDDPNKR-AEATMKLYQEHKVNPAAGCLPLFIQMPILFILWKVIAN-YEFGQ--G 344 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI DLA DP I P + S F+ +S +K Sbjct: 345 LLWIPDLALPDPFY-------------------ILPALYVASTFLSTWLS-AHGNKDLIR 384 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 +M ++F+F + FP+G+ +YW SN+I +VQQ +I K Sbjct: 385 QSLFMNLIFIFLVLQFPSGVTLYWVLSNLIGLVQQWLINKSLKP 428 >gi|228994205|ref|ZP_04154105.1| Membrane protein oxaA 1 [Bacillus pseudomycoides DSM 12442] gi|228765657|gb|EEM14311.1| Membrane protein oxaA 1 [Bacillus pseudomycoides DSM 12442] Length = 246 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 74/245 (30%), Positives = 119/245 (48%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I + P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 8 IATGCNETNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 67 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLYKTH +NPLAGC PI Sbjct: 68 LMIKQTKSTKAMQVLQPEMAKLKEKYSSKDQATQQKLQQEMMQLYKTHGVNPLAGCLPIF 127 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E++ + W DL ADP I P Sbjct: 128 IQMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPYY-------------------ILP 166 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 I+ +++ FIQ K++ + AM++ MP++ + +FPA L +YW N+ I Sbjct: 167 IVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIA 226 Query: 552 QQAVI 556 Q +I Sbjct: 227 QMYMI 231 >gi|228995394|ref|ZP_04155066.1| Membrane protein oxaA 1 [Bacillus mycoides Rock3-17] gi|229003008|ref|ZP_04160867.1| Membrane protein oxaA 1 [Bacillus mycoides Rock1-4] gi|228758236|gb|EEM07422.1| Membrane protein oxaA 1 [Bacillus mycoides Rock1-4] gi|228764347|gb|EEM13222.1| Membrane protein oxaA 1 [Bacillus mycoides Rock3-17] Length = 246 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 74/245 (30%), Positives = 119/245 (48%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I + P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 8 IATGCNETNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 67 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLYKTH +NPLAGC PI Sbjct: 68 LMIKQTKSTKAMQALQPEMAKLKEKYSSKDQATQQKLQQEMMQLYKTHGVNPLAGCLPIF 127 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E++ + W DL ADP I P Sbjct: 128 IQMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPYY-------------------ILP 166 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 I+ +++ FIQ K++ + AM++ MP++ + +FPA L +YW N+ I Sbjct: 167 IVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIA 226 Query: 552 QQAVI 556 Q +I Sbjct: 227 QMYMI 231 >gi|196249890|ref|ZP_03148586.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16] gi|196210766|gb|EDY05529.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16] Length = 254 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 69/240 (28%), Positives = 118/240 (49%), Gaps = 27/240 (11%) Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 ++ P + + Y + +++ L G+FG++I++ T+ ++LL PL +Q Sbjct: 22 TEINEPITQESKGFWNEYIVYPLSWLIKYVAELLGGSFGLSIIVVTILIRLLILPLMIQQ 81 Query: 383 YVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 + M+ +QP+I+ LR+K+ Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+ Sbjct: 82 TRNAKAMQALQPEIEALRKKYSSKDAQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPI 141 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 Y I + E+ + W DL DP I P++ L Sbjct: 142 LIGFYHAIMRTREIAQ-HNFLWF-DLGDKDPYY-------------------ILPLVAGL 180 Query: 500 SMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + FIQ K+ + AM+L MP++ V +FPA L +YW N+ SIVQ +I Sbjct: 181 TTFIQQKIMMAGSAQQNPQMAMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIVQTYLI 240 >gi|225867467|ref|YP_002752845.1| stage III sporulation protein J [Bacillus cereus 03BB102] gi|225786803|gb|ACO27020.1| stage III sporulation protein J [Bacillus cereus 03BB102] Length = 255 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I ++ P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 17 ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 77 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 175 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235 Query: 552 QQAVI 556 Q +I Sbjct: 236 QMYLI 240 >gi|328958800|ref|YP_004376186.1| OxaA-like protein precursor [Carnobacterium sp. 17-4] gi|328675124|gb|AEB31170.1| OxaA-like protein precursor [Carnobacterium sp. 17-4] Length = 267 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 115/260 (44%), Gaps = 27/260 (10%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P E Y I +++ G++G+ I++ T+ ++L+ P+ Q ST Sbjct: 18 PITEQSTGIWDKYVIFNFSRVIIWLSNLFGGSYGVGIIVFTLIIRLILLPVMHGQTKSTR 77 Query: 388 NMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 M +QP++ EL+ K+ L++ +LY +NP+AGC P+L+Q+PV A+Y Sbjct: 78 KMSELQPQLKELQTKYASKDTDTQSKLKEETSKLYSEAGVNPVAGCLPLLIQMPVLIAMY 137 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + IS + E+ + W+ +L A DP I PI+ ++ F Sbjct: 138 QAISRT-EVLKTGNFLWM-NLGAPDPYF-------------------ILPILAAILTFAT 176 Query: 505 MK---MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 K MS A+ +L MP + +F + P+ L +YW N S+ Q ++ Sbjct: 177 TKLSTMSQAEANPTTTTMLYVMPALILFMGITLPSALSLYWVVGNAFSVAQTLLLNNPFK 236 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 + +++++ + + Sbjct: 237 IKKERDEKIKTERDRQRALE 256 >gi|313679788|ref|YP_004057527.1| membrane protein insertase, yidc/oxa1 family [Oceanithermus profundus DSM 14977] gi|313152503|gb|ADR36354.1| membrane protein insertase, YidC/Oxa1 family [Oceanithermus profundus DSM 14977] Length = 461 Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 76/238 (31%), Positives = 122/238 (51%), Gaps = 26/238 (10%) Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 L + ++ + +M Y N+G+AI+L TVFV+LL +PL +Q+ S Sbjct: 243 GFYELPGLFKPNIWGQLSLGLLYVMELAYKYTTNWGLAILLLTVFVRLLLWPLMHQQFKS 302 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A M I+P +DE+ +K+K P + +A++ LY+ H INP AGC P+ +Q+P+ F +++ Sbjct: 303 MAEMNKIKPLMDEINKKYKDDPEKK-NEALMNLYREHKINPAAGCLPMFIQMPILFMMWR 361 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ- 504 VI+ E + WI DL+ DP + P + L M Q Sbjct: 362 VIAN-YEFDQ--GFLWIPDLSLPDPFY-------------------VLPALYVLVMLAQT 399 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 M MS D + I+ M ++F+F + FPAG+ +YW +S +I +VQQ +I K G Sbjct: 400 MLMSHGNKDAMRQGIM--MNLIFIFLVLKFPAGVTLYWVFSTLIGLVQQWMINKQLGI 455 >gi|229094597|ref|ZP_04225664.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-42] gi|228688844|gb|EEL42675.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-42] Length = 246 Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I ++ P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 8 ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 67 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 68 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 128 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 166 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 167 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 226 Query: 552 QQAVI 556 Q +I Sbjct: 227 QMYLI 231 >gi|229106081|ref|ZP_04236693.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-28] gi|228677336|gb|EEL31601.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-28] Length = 246 Score = 142 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I + P YF+ ++ + L N+G+AI++TT+ ++ P Sbjct: 8 IATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFATWLGDNYGLAIVITTLIIRFALLP 67 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 68 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 128 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 166 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM++ MP++ + +FPA L +YW N+ I Sbjct: 167 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 226 Query: 552 QQAVI 556 Q I Sbjct: 227 QMYFI 231 >gi|326489461|dbj|BAK01711.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 512 Score = 142 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 18/235 (7%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ +G AI+L TV +K FPL KKQ S M+++QP++ ++E+ + +Q Sbjct: 122 HVPYPYGFAIILLTVLIKGATFPLTKKQVESALAMRSLQPQVKAIQERHAG-DQERIQLE 180 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470 LYK ++PLAGC P L+ IPV+ +YK +S + E + WI LA Sbjct: 181 TAHLYKLSGVDPLAGCLPTLVTIPVWIGLYKALSNVANEGLLTEGFFWIPSLAGPTTIAA 240 Query: 471 -------TNIFTL-FGILPFYLPGFMHVGIWPIIMSLSMFI--QMKMSPPPADKGQA--- 517 + IF G P P + + P+++ +S ++ Q+ S D Q Sbjct: 241 RESGQGISWIFPFTDGHPPLGWPDTLAYLVLPVLLVISQYVSAQIMQSSQSNDPSQQGAQ 300 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + ++P++ + S P+GL +YW +NV+S QQ + K+ GA+ + + + Sbjct: 301 AAVKFLPLLIGYFALSVPSGLSLYWLTNNVLSSAQQVWLQKLGGAKNPVQEYIDK 355 >gi|326943284|gb|AEA19180.1| OxaA-like protein precursor [Bacillus thuringiensis serovar chinensis CT-43] Length = 255 Score = 142 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 27/258 (10%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 L A I + P YF+ ++ + L N+G+AI Sbjct: 4 KIGLLAMVITLMAIATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFATWLGDNYGLAI 63 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421 ++TT+ ++ PL KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ Sbjct: 64 VITTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + +NPLAGC PI +Q+P+ FA Y I + E+ + W DL ADP Sbjct: 124 NGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY--------- 172 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538 I P++ +++ FIQ K++ + AM++ MP++ + +FPA L Sbjct: 173 ----------ILPVVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAAL 222 Query: 539 IIYWSWSNVISIVQQAVI 556 +YW N+ I Q I Sbjct: 223 SLYWVVGNIFGIAQMYFI 240 >gi|229035144|ref|ZP_04189090.1| Membrane protein oxaA 1 [Bacillus cereus AH1271] gi|228728210|gb|EEL79240.1| Membrane protein oxaA 1 [Bacillus cereus AH1271] Length = 255 Score = 142 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 72/258 (27%), Positives = 120/258 (46%), Gaps = 27/258 (10%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 L A I ++ P YF+ ++ + N+G+AI Sbjct: 4 KIGLLAMVIALMAIATGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAI 63 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421 ++TT+ ++ PL KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ Sbjct: 64 VVTTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + +NPLAGC PI +Q+P+ FA Y I + E+ + W DL ADP Sbjct: 124 NGVNPLAGCLPIFVQMPILFAFYHAIMRTAEI-SKHTFLWF-DLGQADPYY--------- 172 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538 I P++ +++ FIQ K++ + AM++ MP++ + +FPA L Sbjct: 173 ----------ILPVVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAAL 222 Query: 539 IIYWSWSNVISIVQQAVI 556 +YW N+ I Q +I Sbjct: 223 SLYWVVGNIFGIAQMYLI 240 >gi|205371916|ref|ZP_03224736.1| OxaA-like protein precursor [Bacillus coahuilensis m4-4] Length = 257 Score = 142 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 28/265 (10%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + ++ P YF+ ++++++ G++G++I+ T+ ++L+ Sbjct: 16 LLLSGCTEINQPITAESEGIWNKYFVFPLSWLIITFADLFGGSYGLSIITVTILIRLVIL 75 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPI 433 PL KQ ++ M+ + P+I L+EK+ Q LQ+ + L++ H +NPLAGC+P+ Sbjct: 76 PLVIKQTQNSKAMQKLSPEIQSLKEKYSSKDAQTQQKLQQETMALFQKHGVNPLAGCFPL 135 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 ++Q+P+ Y I + ++ + W DL ADP I Sbjct: 136 IVQMPILIGFYHAIVRTDAIKEDS-FLWF-DLGVADPYF-------------------IL 174 Query: 494 PIIMSLSMFIQMKMSPP--PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 P++ + F+Q K+ P M+L MP++ V SFPA L +YW N+ I+ Sbjct: 175 PLVAGATTFLQQKIMMQGVPQQPQMQMMLYLMPIMIVIFAISFPAALSLYWVVGNIFMII 234 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSK 576 I ++ K Sbjct: 235 STYFI--KAPDRKEVVAAEAGGKKK 257 >gi|228988715|ref|ZP_04148800.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771027|gb|EEM19508.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 255 Score = 142 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I ++ P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 17 ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 77 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 175 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM++ MP++ + +FPA L +YW N+ I Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235 Query: 552 QQAVI 556 Q +I Sbjct: 236 QMYLI 240 >gi|311897303|dbj|BAJ29711.1| putative OxaA family protein [Kitasatospora setae KM-6054] Length = 397 Score = 142 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 20/234 (8%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G++I++ V +++ PL KQ +T M+ IQPK+ ++E++K Q + M++LY Sbjct: 36 WGLSIVMMVVVIRICLIPLFVKQIKATRAMQAIQPKMKAIQERYKNDK-QRQSEEMMKLY 94 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD--LAAADPTNIFTLF 477 K NP + C PIL+Q P F A+Y V++ + + G I L +A +IF Sbjct: 95 KEAGTNPFSSCLPILVQAPFFTALYGVLAS---IANDKTIGVIDQPLLESAKQAHIFGAP 151 Query: 478 GILPFYLPGFMHVGI----WPIIMSLSMFIQMKMSPP---------PADKGQAMILNWMP 524 F + + I ++MSLS F+ + P + Q M++ P Sbjct: 152 LSAKFVGAETVQIQIVCAVMIVLMSLSQFVTQRQLMTKNVDLSVKTPFMQQQKMLMYVFP 211 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-IGLIDRLRSTFSKN 577 ++F +FP G+++YW +NV S+ QQ V+++ + D ++ K Sbjct: 212 IMFAVMGINFPVGVLVYWLTTNVWSMAQQLVVIRNNPTPGSRAWDERQARLKKA 265 >gi|229015403|ref|ZP_04172409.1| Membrane protein oxaA 1 [Bacillus cereus AH1273] gi|229026927|ref|ZP_04183250.1| Membrane protein oxaA 1 [Bacillus cereus AH1272] gi|228734385|gb|EEL85056.1| Membrane protein oxaA 1 [Bacillus cereus AH1272] gi|228745882|gb|EEL95878.1| Membrane protein oxaA 1 [Bacillus cereus AH1273] Length = 255 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 27/258 (10%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 L A I + P YF+ ++ + N+G+AI Sbjct: 4 KIGLIAMVVVLMAIATGCSETNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAI 63 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421 ++TT+ ++ PL KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ Sbjct: 64 VVTTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + +NPLAGC PI +Q+P+ FA Y I + E+ + W DL ADP Sbjct: 124 NGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY--------- 172 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538 I PI+ +++ FIQ K++ + AM++ MP++ + +FPA L Sbjct: 173 ----------ILPIVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAAL 222 Query: 539 IIYWSWSNVISIVQQAVI 556 +YW N+ I Q +I Sbjct: 223 SLYWVVGNIFGIAQMYLI 240 >gi|313621678|gb|EFR92461.1| stage III sporulation protein J [Listeria innocua FSL S4-378] Length = 287 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 64/232 (27%), Positives = 116/232 (50%), Gaps = 27/232 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + +++ + GN+ + I++ T+ ++LL PL KQ S M ++QPKI EL Sbjct: 45 YIVFPLSWVITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKEL 104 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L DP I PI+ +L+ F+ K+S + Sbjct: 165 S-FLWMQ-LGNPDPYY-------------------ILPIVAALTTFLSSKISMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 255 >gi|229176162|ref|ZP_04303654.1| Membrane protein oxaA 1 [Bacillus cereus MM3] gi|228607321|gb|EEK64651.1| Membrane protein oxaA 1 [Bacillus cereus MM3] Length = 246 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 27/223 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YF+ ++ + N+G+AI++TT+ ++ PL KQ ST M+ +QP++ +L Sbjct: 30 YFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEMVKL 89 Query: 400 REKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EK+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ FA Y I + E+ Sbjct: 90 KEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTAEI-SK 148 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---D 513 + W DL ADP I P++ +++ FIQ K++ + Sbjct: 149 HTFLWF-DLGQADPYY-------------------ILPVVAAITTFIQQKLAMAGTAGQN 188 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 189 PQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIAQMYLI 231 >gi|16802044|ref|NP_472312.1| hypothetical protein lin2986 [Listeria innocua Clip11262] gi|38503122|sp|Q926Q5|OXAA1_LISIN RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|16415526|emb|CAC98211.1| lin2986 [Listeria innocua Clip11262] Length = 287 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 31/251 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + +++ + GN+ + I++ T+ ++LL PL KQ S M ++QPKI EL Sbjct: 45 YIVFPLSWVITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKEL 104 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIK-T 163 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L DP I PI+ +L+ F+ K+S + Sbjct: 164 DTFLWMQ-LGNPDPYY-------------------ILPIVAALTTFLSSKISMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG----LIDR 569 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 570 LRSTFSKNYNS 580 L K + Sbjct: 264 LEEERLKKKAA 274 >gi|295707340|ref|YP_003600415.1| membrane protein OxaA [Bacillus megaterium DSM 319] gi|294804999|gb|ADF42065.1| membrane protein OxaA [Bacillus megaterium DSM 319] Length = 254 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 68/225 (30%), Positives = 119/225 (52%), Gaps = 27/225 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++ P+ ++++Y + ++G+AI++ T+ ++LL PL KQ +T M+ +QP++ Sbjct: 36 WNEYVVYPLSLVITYLAEVFKSYGVAIIVVTILIRLLILPLMIKQMRNTKAMQTLQPEMQ 95 Query: 398 ELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +L+EK+ Q Q+ + L++T+ +NPLAGC+PIL+Q+P+ I+ I+ + E+ Sbjct: 96 KLKEKYSSKDAQTQQQLQKETMALFQTYGVNPLAGCFPILIQMPILIGIFHAITRTSEIA 155 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---P 511 + + W DL A DP I PI+ ++ FIQ KM Sbjct: 156 NNS-FLWF-DLGARDPLF-------------------ILPIVAGITTFIQQKMMMAGNAN 194 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+L MP++ V +FPA L +YW N+ I+Q I Sbjct: 195 QNPQMAMMLWVMPIMIVVFAINFPAALSLYWVVGNLFMIIQTYFI 239 >gi|301056960|ref|YP_003795171.1| stage III sporulation protein J [Bacillus anthracis CI] gi|300379129|gb|ADK08033.1| stage III sporulation protein J [Bacillus cereus biovar anthracis str. CI] Length = 255 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I ++ P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 17 ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 77 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 175 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + +++ FIQ K++ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 176 AVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235 Query: 552 QQAVI 556 Q +I Sbjct: 236 QMYLI 240 >gi|152977685|ref|YP_001377202.1| OxaA-like protein precursor [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026437|gb|ABS24207.1| 60 kDa inner membrane insertion protein [Bacillus cytotoxicus NVH 391-98] Length = 255 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 27/258 (10%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 L A I ++ P YF+ ++ + N+G+AI Sbjct: 4 KIGLLAMVIALMAIAAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAI 63 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421 ++TT+ ++ PL KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ Sbjct: 64 VITTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 H +NPLAGC PI +Q+P+ FA Y I + E++ + W DL ADP Sbjct: 124 HGVNPLAGCLPIFIQMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPYY--------- 172 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538 I PI+ +++ FIQ K++ + AM++ MP++ + +FPA L Sbjct: 173 ----------ILPIVAAITTFIQQKIAMTGTVGQNPQMAMMVWLMPIMILIFAINFPAAL 222 Query: 539 IIYWSWSNVISIVQQAVI 556 +YW N+ I Q +I Sbjct: 223 SLYWVVGNIFGIAQMYMI 240 >gi|294501989|ref|YP_003565689.1| membrane protein OxaA [Bacillus megaterium QM B1551] gi|294351926|gb|ADE72255.1| membrane protein OxaA [Bacillus megaterium QM B1551] Length = 254 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 67/225 (29%), Positives = 119/225 (52%), Gaps = 27/225 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++ P+ ++++Y + ++G+AI++ T+ ++LL PL KQ +T M+ +QP++ Sbjct: 36 WNEYVVYPLSLVITYLAEVFKSYGVAIIVVTILIRLLILPLMIKQMRNTKAMQTLQPEMQ 95 Query: 398 ELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +L+EK+ Q Q+ + L++T+ +NPLAGC+PIL+Q+P+ I+ I+ + E+ Sbjct: 96 KLKEKYSSKDAQTQQQLQKETMALFQTYGVNPLAGCFPILIQMPILIGIFHAITRTSEIA 155 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---P 511 + + W DL A DP I P++ ++ FIQ KM Sbjct: 156 NNS-FLWF-DLGARDPLF-------------------ILPVVAGITTFIQQKMMMAGNAN 194 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + AM+L MP++ V +FPA L +YW N+ I+Q I Sbjct: 195 QNPQMAMMLWVMPIMIVVFAINFPAALSLYWVVGNLFMIIQTYFI 239 >gi|256826456|ref|YP_003150416.1| preprotein translocase subunit YidC [Kytococcus sedentarius DSM 20547] gi|256689849|gb|ACV07651.1| preprotein translocase subunit YidC [Kytococcus sedentarius DSM 20547] Length = 350 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%) Query: 327 IPRFEMLIDWGWFYFIA--KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 +P I+W +A + + ++I+ + V+LL PL KQ Sbjct: 1 MPNLLYPIEWAVAAILAGAHWGVTALGLPEESGWTWVLSILALVILVRLLMIPLVVKQIH 60 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVF 440 S+ M+ + P++ +++ K+K Q + ++LYK + NP A C PIL+QIP+ Sbjct: 61 SSRKMQLLAPELKKIQAKYKGKKDQASMQRQQAETMELYKNNGTNPFASCLPILVQIPIL 120 Query: 441 FAIYKVISISLEMR---HAPFWGWIKDL-AAADPTNIFTLFGILPF----YLPGFMHVGI 492 F +++V++ E+ P +DL ++ D IF F L G + + Sbjct: 121 FGLFRVLNGVDEIAAGTKDPIGFMTRDLASSFDAATIFGAELSDSFLHDSDLTGKIVSVV 180 Query: 493 WPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 ++M++ F+ MKM P + Q ++L +PV+ +FP G+++YW Sbjct: 181 LILLMTVFTFVSMKMMMDKNMPDSAKEGPMAQSQTIMLYALPVILAVTGVNFPIGVLVYW 240 Query: 543 SWSNVISIVQQAVIMKMHGAE 563 +++N+ S QQ +++ Sbjct: 241 TFTNLWSYFQQLYVIRNLPTP 261 >gi|297565963|ref|YP_003684935.1| membrane protein insertase, YidC/Oxa1 family [Meiothermus silvanus DSM 9946] gi|296850412|gb|ADH63427.1| membrane protein insertase, YidC/Oxa1 family [Meiothermus silvanus DSM 9946] Length = 454 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 66/228 (28%), Positives = 117/228 (51%), Gaps = 24/228 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + ++ + +M + G++ +AI+ T+ V+LL +PL +QY S A ++ IQP I Sbjct: 247 DIWGRLSLGLLWVMETGHRYTGSWFLAIVFLTILVRLLLWPLMHQQYKSMAEIQRIQPLI 306 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +E+ +K+K + + +A ++LY+ H +NP AGC P+ LQ+P+ F ++KVIS E Sbjct: 307 EEINKKYKDNQEKR-TEATMKLYQEHKVNPAAGCLPLFLQMPILFVLWKVISN-YEFSQ- 363 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + W+ DLA DP I P++ SM +S ++ Sbjct: 364 -GFLWLPDLALPDPYY-------------------ILPVLYVASMIASTWLS-AHGNQSA 402 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 ++ ++F+F + FP+G+ IYW S +IS+ QQ +I + A Sbjct: 403 IRQGIFINLIFIFLVLQFPSGVTIYWILSTLISLGQQVLINRSLAARP 450 >gi|239918804|ref|YP_002958362.1| preprotein translocase subunit YidC [Micrococcus luteus NCTC 2665] gi|281414969|ref|ZP_06246711.1| preprotein translocase subunit YidC [Micrococcus luteus NCTC 2665] gi|239840011|gb|ACS31808.1| preprotein translocase subunit YidC [Micrococcus luteus NCTC 2665] Length = 332 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 38/269 (14%) Query: 336 WGWFYFIAKPMFMLMSYFYNL-------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F ++ + + ++I+L V ++ L PL KQ + Sbjct: 6 LSPFRWLMSWLLGAFHSILEFAGLPADSGWTWALSILLLVVLIRTLLIPLFVKQIKAQRA 65 Query: 389 MKNIQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 M+ IQP++ +L+ K+K Q+ ++ L K H NP A C P+L+Q+P FFA+Y Sbjct: 66 MQAIQPELQKLQAKYKGKKDQLSRQAMAMEQQALMKEHKANPFAACLPLLIQMPFFFALY 125 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIF---TLFGI-----------LPFYLPGFMHV 490 +V+ + R A G D +AD F T+FG P P + Sbjct: 126 QVLIGA---RGAAERGEAMDALSADQIRSFEGSTIFGARMSDTFMNSLGAPGSGPVIVTA 182 Query: 491 GIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLII 540 + ++MS SMF KM P + Q ++L MP++F +FP G+++ Sbjct: 183 IVLILLMSGSMFFMQKMLMTKNMTQQALSGPMMQTQQIMLYAMPLIFGIGGINFPIGVLL 242 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 YW++SN ++ QQ I++ + L ++ Sbjct: 243 YWTYSNFWAVGQQWWIIRNNPTPGSLAEK 271 >gi|255016877|ref|ZP_05289003.1| SpoIIIJ protein [Listeria monocytogenes FSL F2-515] Length = 297 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 27/232 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + + + + G++ + I++ T+ ++LL PL KQ S M N+QPKI EL Sbjct: 45 YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 104 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L DP I P++ +L+ F+ K+S + Sbjct: 165 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 255 >gi|296134496|ref|YP_003641743.1| membrane protein insertase, YidC/Oxa1 family [Thermincola sp. JR] gi|296033074|gb|ADG83842.1| membrane protein insertase, YidC/Oxa1 family [Thermincola potens JR] Length = 228 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 26/226 (11%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + N+G+AI+L TV +K+L PL KQ S + +QPK+ E++EK+K + Q+A++ Sbjct: 24 IPNYGLAIILITVLIKMLLLPLTIKQMKSLKMTQQLQPKVKEIQEKYKDP--KQAQQAIM 81 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAAADPTNIFT 475 +LYK + NPL+GC P+LLQ+P+ A+Y+ + A + WI +L+ D Sbjct: 82 ELYKQYGANPLSGCLPLLLQMPIIIALYRALMKFPYTNEAHAKFLWISNLSQHDKI---- 137 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 + PI+ L+ ++ +M+ D+ Q +L MP+ + SFP Sbjct: 138 ----------------VLPILAVLTTYLLQRMTTNMQDQTQKTMLIVMPLFIGWLSMSFP 181 Query: 536 AGLIIYWSWSNVISIVQQAVIMKM---HGAEIGLIDRLRSTFSKNY 578 AGL +YW +N++ +QQ I KM + + Sbjct: 182 AGLALYWVVTNLVGAIQQYFINKMPLDIPVKEETGPNETGRKKRKN 227 >gi|228942635|ref|ZP_04105167.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975565|ref|ZP_04136117.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982201|ref|ZP_04142490.1| Membrane protein oxaA 1 [Bacillus thuringiensis Bt407] gi|228777553|gb|EEM25831.1| Membrane protein oxaA 1 [Bacillus thuringiensis Bt407] gi|228784175|gb|EEM32202.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817061|gb|EEM63154.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 246 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I + P YF+ ++ + L N+G+AI++TT+ ++ P Sbjct: 8 IATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFATWLGDNYGLAIVITTLIIRFALLP 67 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 68 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 128 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 166 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM++ MP++ + +FPA L +YW N+ I Sbjct: 167 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 226 Query: 552 QQAVI 556 Q I Sbjct: 227 QMYFI 231 >gi|313625809|gb|EFR95423.1| stage III sporulation protein J [Listeria innocua FSL J1-023] Length = 287 Score = 141 bits (354), Expect = 4e-31, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 120/251 (47%), Gaps = 31/251 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + +++ + GN+ + I++ T+ ++LL PL KQ S M ++QPKI EL Sbjct: 45 YIVFPLSWVITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKEL 104 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIK-T 163 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L DP I P++ +L+ F+ K+S + Sbjct: 164 DTFLWMQ-LGNPDPYF-------------------ILPVVAALTTFLSSKISMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG----LIDR 569 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 570 LRSTFSKNYNS 580 L K + Sbjct: 264 LEEERLKKKAA 274 >gi|300118812|ref|ZP_07056532.1| OxaA-like protein precursor [Bacillus cereus SJ1] gi|298723780|gb|EFI64502.1| OxaA-like protein precursor [Bacillus cereus SJ1] Length = 255 Score = 141 bits (354), Expect = 4e-31, Method: Composition-based stats. Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 27/258 (10%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 L A I ++ P YF+ ++ + N+G+AI Sbjct: 4 KIGLLAMVIALMAIATGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFNSNYGLAI 63 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421 ++TT+ ++ PL KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ Sbjct: 64 VVTTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + +NPLAGC PI +Q+P+ FA Y I + E+ + W DL ADP Sbjct: 124 NGVNPLAGCLPIFVQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY--------- 172 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538 I P++ +++ FIQ K++ + AM+L MP++ + +FPA L Sbjct: 173 ----------ILPVVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAAL 222 Query: 539 IIYWSWSNVISIVQQAVI 556 +YW N+ I Q +I Sbjct: 223 SLYWVVGNIFGIAQMYLI 240 >gi|206975771|ref|ZP_03236682.1| stage III sporulation protein J [Bacillus cereus H3081.97] gi|217962978|ref|YP_002341556.1| OxaA-like protein precursor [Bacillus cereus AH187] gi|229159046|ref|ZP_04287102.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 4342] gi|206745865|gb|EDZ57261.1| stage III sporulation protein J [Bacillus cereus H3081.97] gi|217067037|gb|ACJ81287.1| stage III sporulation protein J [Bacillus cereus AH187] gi|228624465|gb|EEK81236.1| Membrane protein oxaA 1 [Bacillus cereus ATCC 4342] gi|324329437|gb|ADY24697.1| OxaA-like protein precursor [Bacillus thuringiensis serovar finitimus YBT-020] Length = 255 Score = 141 bits (354), Expect = 4e-31, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I ++ P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 17 ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 77 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPLY-------------------ILP 175 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM++ MP++ + +FPA L +YW N+ I Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235 Query: 552 QQAVI 556 Q +I Sbjct: 236 QMYLI 240 >gi|229164437|ref|ZP_04292365.1| Membrane protein oxaA 1 [Bacillus cereus R309803] gi|228619042|gb|EEK75940.1| Membrane protein oxaA 1 [Bacillus cereus R309803] Length = 246 Score = 141 bits (354), Expect = 4e-31, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I + P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 8 IATGCSETNQPITPKSTGIWNEYFVYPLSQLITYFADLFGNNYGLAIVVTTLIIRFALLP 67 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 68 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 128 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 166 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 I+ +++ FIQ K++ + AM++ MP++ + +FPA L +YW N+ I Sbjct: 167 IVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIA 226 Query: 552 QQAVI 556 Q +I Sbjct: 227 QMYLI 231 >gi|138897069|ref|YP_001127522.1| OxaA-like protein [Geobacillus thermodenitrificans NG80-2] gi|134268582|gb|ABO68777.1| Stage III sporulation [Geobacillus thermodenitrificans NG80-2] Length = 238 Score = 141 bits (354), Expect = 4e-31, Method: Composition-based stats. Identities = 69/240 (28%), Positives = 118/240 (49%), Gaps = 27/240 (11%) Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 ++ P + + Y + +++ L G+FG++I++ T+ ++LL PL +Q Sbjct: 6 TEINEPITQESKGFWNEYIVYPLSWLIKYVAELLGGSFGLSIIVVTILIRLLILPLMIQQ 65 Query: 383 YVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 + M+ +QP+I+ LR+K+ Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+ Sbjct: 66 TRNAKAMQALQPEIEALRKKYSSKDAQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPI 125 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 Y I + E+ + W DL DP I P++ L Sbjct: 126 LIGFYHAIMRTREIAQ-HNFLWF-DLGDKDPYY-------------------ILPLVAGL 164 Query: 500 SMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + FIQ K+ + AM+L MP++ V +FPA L +YW N+ SIVQ +I Sbjct: 165 TTFIQQKIMMAGSAQQNPQMAMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIVQTYLI 224 >gi|47568685|ref|ZP_00239382.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus G9241] gi|47554673|gb|EAL13027.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus G9241] Length = 246 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I ++ P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 8 ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 67 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 68 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 128 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 166 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM++ MP++ + +FPA L +YW N+ I Sbjct: 167 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 226 Query: 552 QQAVI 556 Q +I Sbjct: 227 QMYLI 231 >gi|108805126|ref|YP_645063.1| 60 kDa inner membrane insertion protein [Rubrobacter xylanophilus DSM 9941] gi|108766369|gb|ABG05251.1| 60 kDa inner membrane insertion protein [Rubrobacter xylanophilus DSM 9941] Length = 246 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 22/226 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 F + + ++ F+ + +AI + TV V+ + FPL +Q S M+ ++P+I Sbjct: 7 EIFDPLFSLLGGMLFTFHGWGAPWWLAIAMLTVVVRAVLFPLTFRQVKSMRRMQELKPEI 66 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--SISLEMR 454 DE+R + K PQ Q+ M++LY NINPL GC P L+Q+P+F +Y I LE Sbjct: 67 DEIRRRHKD-DPQRQQQEMMKLYGERNINPLGGCLPALVQLPIFLVLYYTIKEFEHLESF 125 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 W DL A DP P++ L++ +++ + Sbjct: 126 RTGGLLWFDDLTAYDPYF-------------------ALPVVYVLTLMAAQEITIRNTNP 166 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 Q ++ +PVVF L+ FPAGL +Y+ SN+IS++Q +I ++H Sbjct: 167 QQRQLMRALPVVFGVVLARFPAGLFVYYITSNLISVLQNLLIYRLH 212 >gi|295402125|ref|ZP_06812084.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus thermoglucosidasius C56-YS93] gi|312112754|ref|YP_003991070.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y4.1MC1] gi|294975808|gb|EFG51427.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus thermoglucosidasius C56-YS93] gi|311217855|gb|ADP76459.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y4.1MC1] Length = 256 Score = 140 bits (353), Expect = 5e-31, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 27/240 (11%) Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 + P + Y + +++ G++G++I++ T+F++LL PL +Q Sbjct: 23 TQINEPITPESKGFWNEYIVYPLSWLIKYVAGVFGGSYGLSIIVVTIFIRLLILPLMIQQ 82 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 + M+ +QP+I +LREK+ Q LQ+ M+ L++ H +NP+AGC+PIL+Q+P+ Sbjct: 83 TKNAKAMQALQPEIQKLREKYSSKDMQTQQKLQQEMMLLFQKHGVNPMAGCFPILIQMPI 142 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 Y I + E+ + W DL DP I PI+ + Sbjct: 143 LIGFYHAIMRTKEIA-EHNFLWF-DLGEKDPFY-------------------ILPIVAGI 181 Query: 500 SMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + FIQ K+ + M+L MP++ V +FPA L +YW N+ SI Q I Sbjct: 182 TTFIQQKIVMADTGQQNPQMVMMLWMMPIMIVIFAINFPAALSLYWVVGNIFSIAQTYFI 241 >gi|218900627|ref|YP_002449038.1| stage III sporulation protein J [Bacillus cereus G9842] gi|228911326|ref|ZP_04075130.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 200] gi|218544253|gb|ACK96647.1| stage III sporulation protein J [Bacillus cereus G9842] gi|228848344|gb|EEM93194.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 200] Length = 255 Score = 140 bits (353), Expect = 5e-31, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I + P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 17 IATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLP 76 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 77 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + + + W DL ADP I P Sbjct: 137 VQMPILFAFYHAIMRTTAI-SEHTFLWF-DLGQADPFY-------------------ILP 175 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235 Query: 552 QQAVI 556 Q I Sbjct: 236 QMYFI 240 >gi|229199690|ref|ZP_04326333.1| Membrane protein oxaA 1 [Bacillus cereus m1293] gi|228583785|gb|EEK41960.1| Membrane protein oxaA 1 [Bacillus cereus m1293] Length = 255 Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I ++ P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 17 ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 77 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPFY-------------------ILP 175 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM++ MP++ + +FPA L +YW N+ I Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235 Query: 552 QQAVI 556 Q +I Sbjct: 236 QMYLI 240 >gi|229822696|ref|YP_002884222.1| 60 kDa inner membrane insertion protein [Beutenbergia cavernae DSM 12333] gi|229568609|gb|ACQ82460.1| 60 kDa inner membrane insertion protein [Beutenbergia cavernae DSM 12333] Length = 382 Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 21/208 (10%) Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 IQ + + K + Q +Q+ M+ +Y+ NP A C PIL Q PVFFA+++V++ Sbjct: 74 EIQKLQKKYKGKTDPASRQAMQQEMMAIYREAGTNPFASCLPILAQSPVFFALFRVLASL 133 Query: 451 LEM----RHAPFWGWIKD--LAAADPTNIFTLFGILPF----YLPGFMHVGIWPIIMSLS 500 + P G + A A+ + F F + + + ++MS + Sbjct: 134 PALASGDYGRPSIGPLTQEIAAEAEQSTFFGAQLSQTFMSSDDVQVKIVTVVLIVLMSAT 193 Query: 501 MFIQMK----MSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 F + + P P + Q M++ +P++F F +FP G+++YWS SN+ ++ Sbjct: 194 TFFTQRQLTMKNMPQTALDNPMARQQRMLMYVLPLIFAFTGVNFPIGVLVYWSTSNLWTM 253 Query: 551 VQQAVIMKMHGAE-IGLIDRLRSTFSKN 577 QQ +++ A +L+ ++ Sbjct: 254 GQQFYVIRRSPAPGSEAEAKLKERQARK 281 >gi|320532819|ref|ZP_08033596.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral taxon 171 str. F0337] gi|320134970|gb|EFW27141.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral taxon 171 str. F0337] Length = 397 Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 33/272 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +L+ + + ++I+ T+ V+LL PL KQ ++ M+ +QP++ Sbjct: 14 WVMVTIHKALVLIGFPDGPGIAWVLSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPELQ 73 Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----I 449 L+ K+K Q + + M+ LY+ H NP+A C PIL+Q+P+FFA+++V++ + Sbjct: 74 ALQAKYKGKKDPESRQRMNEEMMALYRKHGTNPMASCLPILVQMPIFFALFRVLASLGAV 133 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-------YLPGFMHVGIWPIIMSLSMF 502 + P G + A + ++FG + IIMS++ + Sbjct: 134 ATGKYGRPSIGPLTQQLA-EQVQASSVFGASLSSSFLSSSDTQVKIVTVAMIIIMSVTQW 192 Query: 503 IQM-KMSPPPA--------DKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 M ++S + Q M+L MPV+F + +F G+++YW SN+ ++ Sbjct: 193 YTMAQLSMKNMSTESLNSDNPMIRSQRMMLYVMPVIFAVSGVNFQIGVLVYWVVSNLWTM 252 Query: 551 VQQAVIMKMHG-----AEIGLIDRLRSTFSKN 577 QQ ++ AE R+ + ++ Sbjct: 253 GQQFFTIRNMPAPGSEAEKKYRARINAKRARK 284 >gi|229087976|ref|ZP_04220081.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-44] gi|228695333|gb|EEL48213.1| Membrane protein oxaA 1 [Bacillus cereus Rock3-44] Length = 246 Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats. Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 27/240 (11%) Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 + +P YF+ ++ + N+G+AI++TT+ ++ PL KQ Sbjct: 13 SETNLPITSKSTGIWNEYFVYPLSQLITYFAKLFGSNYGLAIVVTTLIIRFALLPLMIKQ 72 Query: 383 YVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI +Q+P+ Sbjct: 73 TKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPI 132 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 FA Y I + E+ + W DL ADP I PI+ ++ Sbjct: 133 LFAFYHAIMRTEEI-SKHTFLWF-DLGQADPYY-------------------ILPIVAAI 171 Query: 500 SMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + FIQ K++ + AM++ MP++ + +FPA L +YW N+ I Q +I Sbjct: 172 TTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIAQMYMI 231 >gi|206970374|ref|ZP_03231327.1| stage III sporulation protein J [Bacillus cereus AH1134] gi|206734951|gb|EDZ52120.1| stage III sporulation protein J [Bacillus cereus AH1134] Length = 255 Score = 140 bits (352), Expect = 7e-31, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I + P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 17 IATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLP 76 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 77 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 136 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + + + W DL ADP I P Sbjct: 137 VQMPILFAFYHAIMRTTAI-SEHTFLWF-DLGQADPFY-------------------ILP 175 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235 Query: 552 QQAVI 556 Q I Sbjct: 236 QMYFI 240 >gi|289642462|ref|ZP_06474607.1| 60 kDa inner membrane insertion protein [Frankia symbiont of Datisca glomerata] gi|289507721|gb|EFD28675.1| 60 kDa inner membrane insertion protein [Frankia symbiont of Datisca glomerata] Length = 451 Score = 140 bits (352), Expect = 7e-31, Method: Composition-based stats. Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 30/235 (12%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + ++++L + V+++ FPL KQ + M+ +QPKI E+R+K+ Q + ++ Sbjct: 29 FFAWALSVVLLVICVRIMIFPLFVKQVKAQRTMQLMQPKIKEIRDKY-GHDRQQMNAKIM 87 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVI-----------------SISLEMRHAPFW 459 +L K H NPL GC PILLQIP+F A++ V + L + Sbjct: 88 ELQKEHG-NPLLGCLPILLQIPLFIALFHVFSHLRPVDRPGGVLEWAPRVGLTAQQVQQI 146 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI----WPIIMSLSMFIQMKMSPP---PA 512 K L + T+ + L F +V I ++M + F+ + P Sbjct: 147 AEAKLLGVSLSTSFTSSSNFLEFVQANGTNVKIFAVTLIVLMGATTFLTQRQIMARTGPV 206 Query: 513 DKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D QA++ + P++ FP +++YW +N+ S+ QQ ++K Sbjct: 207 DPQQAIVQKVLLYGSPIMLAVFGFQFPIAVLLYWLTTNLWSMGQQFFVIKKMPPP 261 >gi|229142235|ref|ZP_04270759.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST26] gi|228641253|gb|EEK97560.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST26] Length = 246 Score = 140 bits (352), Expect = 7e-31, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I ++ P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 8 ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 67 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 68 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 128 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPLY-------------------ILP 166 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM++ MP++ + +FPA L +YW N+ I Sbjct: 167 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 226 Query: 552 QQAVI 556 Q +I Sbjct: 227 QMYLI 231 >gi|332672290|ref|YP_004455298.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas fimi ATCC 484] gi|332341328|gb|AEE47911.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas fimi ATCC 484] Length = 371 Score = 140 bits (351), Expect = 8e-31, Method: Composition-based stats. Identities = 59/250 (23%), Positives = 113/250 (45%), Gaps = 25/250 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +F + + ++I+ V +++L PL KQ ++ M+ + P++ Sbjct: 17 WIMVQFHALFTTLGLNPESGAAWALSIVGLVVVIRILLIPLFFKQIKASRGMQMLAPEMQ 76 Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +++K+K + + + ++LY+ H NP A C PILLQ P+FFA+++V+ ++ Sbjct: 77 AIQKKYKGKTDPASREAMSRETMELYRKHGTNPFASCLPILLQSPIFFALFRVLYQLPQI 136 Query: 454 RHAPFWGWIKDLAAADPT-----NIFTLFGILPF-----YLPGFMHVGIWPIIMSLSMFI 503 A I ++A IF F + + I MS + F+ Sbjct: 137 A-AGDIKPIGPMSAELAAQAEAATIFGAPLSGTFMQAGDNWHIRVVTVVLIIAMSATTFL 195 Query: 504 QMK----MSPPP-----ADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + + PP Q +L + +P+VF F+ +FP G++IYW+ +N+ S+ QQ Sbjct: 196 TQRQLTMKNMPPAALQGPMAQQQKVLLYVLPLVFAFSGVNFPIGVLIYWTTTNLWSMGQQ 255 Query: 554 AVIMKMHGAE 563 ++ A Sbjct: 256 FYTIRRMPAP 265 >gi|194016614|ref|ZP_03055228.1| membrane protein OxaA 1 [Bacillus pumilus ATCC 7061] gi|194012087|gb|EDW21655.1| membrane protein OxaA 1 [Bacillus pumilus ATCC 7061] Length = 259 Score = 140 bits (351), Expect = 8e-31, Method: Composition-based stats. Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 28/265 (10%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + P + Y + ++ N+G+AI++ T+ ++LL Sbjct: 17 VLLAGCTQINEPITSDSKGFWNSYIVYPLSQLITYMANLTGENYGVAIIIVTLLIRLLIL 76 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPI 433 PL KQ ST M+ +QP++ +LREK+ + Q+ + L++ + +NPLAGC+PI Sbjct: 77 PLMIKQLRSTKAMQALQPELKKLREKYSSKDQKTQQQLQQETMALFQKNGVNPLAGCFPI 136 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+ Y I + E++ + W DL + DP + Sbjct: 137 LIQMPILIGFYHAIMRTAEIK-KHTFLWF-DLGSPDPLF-------------------LL 175 Query: 494 PIIMSLSMFIQMKMSPP--PADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISI 550 PII ++ FIQ K+ P+D Q I+ W MP++ + SFPA L +YW N+ I Sbjct: 176 PIIAGVATFIQQKLMMAGNPSDNPQMAIMLWVMPIMIIVFAISFPAALSLYWVVGNIFMI 235 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFS 575 +Q VI K ++ ++ Sbjct: 236 IQTLVI-KTPQVKLDTKEKAGGNKK 259 >gi|222098963|ref|YP_002533021.1| oxaa-like protein precursor [Bacillus cereus Q1] gi|221243022|gb|ACM15732.1| stage III sporulation protein J [Bacillus cereus Q1] Length = 246 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I ++ P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 8 ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 67 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 68 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 128 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPFY-------------------ILP 166 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM++ MP++ + +FPA L +YW N+ I Sbjct: 167 VVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILIFAINFPAALSLYWVVGNIFGIA 226 Query: 552 QQAVI 556 Q +I Sbjct: 227 QMYLI 231 >gi|157694477|ref|YP_001488939.1| OxaA-like protein precursor [Bacillus pumilus SAFR-032] gi|157683235|gb|ABV64379.1| stage III sporulation protein J [Bacillus pumilus SAFR-032] Length = 263 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 28/265 (10%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + P + Y + ++ N+G+AI++ T+ ++LL Sbjct: 21 VLLAGCTQINEPITSDSKGFWNSYIVYPLSQLITYMANLTGENYGVAIIIVTLLIRLLIL 80 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPI 433 PL KQ ST M+ +QP++ +LREK+ + Q+ + L++ + +NPLAGC+PI Sbjct: 81 PLMIKQLRSTKAMQALQPELKKLREKYSSKDQKTQQQLQQETMALFQKNGVNPLAGCFPI 140 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+ Y I + E++ + W DL + DP + Sbjct: 141 LIQMPILIGFYHAIMRTAEIK-KHTFLWF-DLGSPDPLF-------------------LL 179 Query: 494 PIIMSLSMFIQMKMSPP--PADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISI 550 PII ++ FIQ K+ P+D Q I+ W MP++ + SFPA L +YW N+ I Sbjct: 180 PIIAGVATFIQQKLMMAGNPSDNPQMAIMLWVMPIMIIVFAISFPAALSLYWVVGNIFMI 239 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFS 575 +Q VI K ++ ++ Sbjct: 240 IQTLVI-KTPQVKLDTKEKAGGNKK 263 >gi|116874193|ref|YP_850974.1| SpoJ protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116743071|emb|CAK22195.1| SpoJ protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 287 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 31/251 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + +++ + GN+ + I++ T+ ++LL PL KQ S M ++QPKI EL Sbjct: 45 YIVFPLSWLITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKEL 104 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 + K+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 105 QVKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIK-T 163 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L DP I PI+ +L+ F+ K+S + Sbjct: 164 DTFLWMQ-LGNPDPYY-------------------ILPIVAALTTFLSSKISMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG----LIDR 569 K AMI+ MPV+ +F + P+ L +YW NV ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNVFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 570 LRSTFSKNYNS 580 L K + Sbjct: 264 LEEERLKKKAA 274 >gi|89101258|ref|ZP_01174079.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911] gi|89084023|gb|EAR63203.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911] Length = 244 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + ++ P + Y + ++ L G++G+AI++ T+ ++LL P Sbjct: 3 LLTGCTEVNKPITSESEGFWNEYIVYPLSMFIVKVAETLGGSYGLAIIVVTLIIRLLILP 62 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ S+ M+ +QP++ +LREK+ Q LQ+ + L++ H +NPLAGC+P++ Sbjct: 63 LMIKQTKSSKAMQALQPEMQKLREKYSSKDQKTQQKLQQETMALFQQHGVNPLAGCFPLI 122 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ Y IS + E+ + + W DL + DP + + P Sbjct: 123 VQMPILIGFYHAISRTREIAN-HDFLWF-DLGSPDP-------------------IYLLP 161 Query: 495 IIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 +I + FIQ K+ + AM+L MPV+ + +FPA L +YW N+ IV Sbjct: 162 LIAGATTFIQQKIMMAGTANQNPQMAMMLWIMPVMIIVFAINFPAALSLYWVVGNIFMIV 221 Query: 552 QQAVI 556 Q I Sbjct: 222 QTYFI 226 >gi|255659825|ref|ZP_05405234.1| stage III sporulation protein J [Mitsuokella multacida DSM 20544] gi|260847900|gb|EEX67907.1| stage III sporulation protein J [Mitsuokella multacida DSM 20544] Length = 222 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 114/210 (54%), Gaps = 21/210 (10%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 +G++G+AI+L T+ +K++ +PL KQ S M+ + PK+ +++EK+K +P QV+Q+ + Sbjct: 31 IGSYGVAIILLTILIKMMLYPLTVKQVKSMKAMQELSPKMKKIQEKYKDNP-QVMQQKVG 89 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFT 475 LYK +NPLAGC P+L+Q+P+ +Y + + + + W+ +++ DP Sbjct: 90 ALYKEAGVNPLAGCLPLLIQMPILMGMYYALYNFTYPTPESAAFLWLPNMSDPDPYY--- 146 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 I P++ +L+ F+Q K + ++ +++ MP+ + +FP Sbjct: 147 ----------------ILPVLSALTTFLQQKQTTTEMNQQMKIMMTVMPLFIGWISLNFP 190 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 +GL++YW N++ I QQ + + + Sbjct: 191 SGLVLYWVTMNIVQITQQWWMYRHDDKKKE 220 >gi|228905430|ref|ZP_04069385.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 4222] gi|228968638|ref|ZP_04129621.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar sotto str. T04001] gi|228791067|gb|EEM38685.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar sotto str. T04001] gi|228854250|gb|EEM98953.1| Membrane protein oxaA 1 [Bacillus thuringiensis IBL 4222] Length = 246 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I + P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 8 IATGCSETGQPITSKSTGIWNEYFVYPLSQLITYFADLFNSNYGLAIVITTLIIRFALLP 67 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 68 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + + + W DL ADP I P Sbjct: 128 VQMPILFAFYHAIMRTTAI-SEHTFLWF-DLGQADPFY-------------------ILP 166 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 167 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 226 Query: 552 QQAVI 556 Q I Sbjct: 227 QMYFI 231 >gi|320531077|ref|ZP_08032106.1| putative OxaA-like protein [Selenomonas artemidis F0399] gi|320136659|gb|EFW28612.1| putative OxaA-like protein [Selenomonas artemidis F0399] Length = 225 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 21/186 (11%) Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 + +PL KQ S M+ IQPK+ +++EK+K P++LQ+ +L++ +NPLAGC P+ Sbjct: 49 VTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKN-DPRMLQQKTGELFRQAGVNPLAGCLPL 107 Query: 434 LLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 L+Q+P+ +Y + + A + WI L+A DP I Sbjct: 108 LVQMPILMGMYYALFNFAYPSEAAEAFLWIPHLSAPDPLY-------------------I 148 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P++ +L+ F+Q KM+ + +++ MP+ + +FPAGL++YW N++ I Q Sbjct: 149 LPVLSALTTFLQQKMTSTEMNPQMKIMMTVMPLFIGWISLNFPAGLVLYWVTMNIVQIAQ 208 Query: 553 QAVIMK 558 Q + + Sbjct: 209 QWWMYR 214 >gi|313894712|ref|ZP_07828273.1| stage III sporulation protein J [Selenomonas sp. oral taxon 137 str. F0430] gi|312976621|gb|EFR42075.1| stage III sporulation protein J [Selenomonas sp. oral taxon 137 str. F0430] Length = 225 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 21/186 (11%) Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 + +PL KQ S M+ IQPK+ +++EK+K P++LQ+ +L++ +NPLAGC P+ Sbjct: 49 VTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKN-DPRMLQQKTGELFRQAGVNPLAGCLPL 107 Query: 434 LLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 L+Q+P+ +Y + + A + WI L+A DP I Sbjct: 108 LVQMPILMGMYYALFNFAYPSEAAEAFLWIPHLSAPDPLY-------------------I 148 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P++ +L+ F+Q KM+ + +++ MP+ + +FPAGL++YW N++ I Q Sbjct: 149 LPVLSALTTFLQQKMTSTEMNPQMKIMMTVMPLFIGWISLNFPAGLVLYWVTMNIVQIAQ 208 Query: 553 QAVIMK 558 Q + + Sbjct: 209 QWWMYR 214 >gi|145344819|ref|XP_001416922.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] gi|144577148|gb|ABO95215.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] Length = 271 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 19/226 (8%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 ++G +I++ TV VKL FPL+KKQ S+ M+ +QP+I EL+ + P+ LQ + Sbjct: 38 YSYGFSIIVLTVLVKLATFPLSKKQVESSMQMQAMQPRIKELQAMYAN-DPERLQMEQAR 96 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLAAADPTNIFT- 475 LYK NPLAGC P+ +PVF +Y+ +S + E + WI L Sbjct: 97 LYKEAGFNPLAGCLPVFATLPVFIGLYRALSNAASEGLLTDGFYWIPSLGGPTSIASRNA 156 Query: 476 ----------LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAM---I 519 + G P + P+++ S ++ ++ P D Q I Sbjct: 157 GSGFAWLWPFVDGHPPLGWHDTTAYLVLPVLLVASQYVSQQIVSPQPKTDDPAQQQSQAI 216 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 L ++P++ F + PAGL +YW +N+I+ Q ++ K A Sbjct: 217 LKFLPLMIGFFSLNVPAGLTLYWFANNIITTAQTLILRKTTTAPEP 262 >gi|296330034|ref|ZP_06872518.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676758|ref|YP_003868430.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. spizizenii str. W23] gi|296153073|gb|EFG93938.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305415002|gb|ADM40121.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. spizizenii str. W23] Length = 259 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 27/246 (10%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + P + Y + ++ N+G++I+L T+ ++LL Sbjct: 16 MLLAGCSSVKEPITADSPHFWDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLIL 75 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433 PL KQ S+ M+ +QP++ +L+EK+ Q LQ+ + L++ H +NPLAGC+PI Sbjct: 76 PLMIKQLRSSKAMQALQPEMQKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPI 135 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+ Y I + + + W DL DP I Sbjct: 136 LIQMPILIGFYHAIMRTQAI-SEHSFLWF-DLGEKDPYY-------------------IL 174 Query: 494 PIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 PI+ ++ F+Q K+ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 175 PIVAGVATFVQQKLMMAGNAQQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMI 234 Query: 551 VQQAVI 556 Q +I Sbjct: 235 AQTFLI 240 >gi|325066325|ref|ZP_08124998.1| 60 kDa inner membrane insertion protein [Actinomyces oris K20] Length = 394 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 33/272 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +L+ + + ++I+ T+ V+LL PL KQ ++ M+ +QP++ Sbjct: 14 WVMVTIHKALVLIGFPDGPGIAWVLSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPELQ 73 Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----I 449 L+ K+K Q + + M+ LY+ H NP+A C PIL+Q+P+FFA+++V++ + Sbjct: 74 ALQAKYKGKKDPESRQRMNEEMMALYRKHGTNPMASCLPILVQMPIFFALFRVLASLGAV 133 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-------YLPGFMHVGIWPIIMSLSMF 502 + P G + A + ++FG + IIMS++ + Sbjct: 134 AGGTYGRPSIGPLTQQLA-EQVQASSVFGASLSSSFLGSSDTQVKIVTVAMIIIMSVTQW 192 Query: 503 IQM-KMSPPPA--------DKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 M ++S + Q M+L MPV+F + +F G+++YW SN+ ++ Sbjct: 193 YTMAQLSMKNMSTDSLNSDNPMIRSQRMMLYVMPVIFAVSGVNFQIGVLVYWVVSNLWTM 252 Query: 551 VQQAVIMKMHG-----AEIGLIDRLRSTFSKN 577 QQ ++ AE R+ + ++ Sbjct: 253 GQQFFTIRNMPAPGSEAEKKYRARINAKRARK 284 >gi|329944746|ref|ZP_08292825.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral taxon 170 str. F0386] gi|328529882|gb|EGF56772.1| membrane protein insertase, YidC/Oxa1 family [Actinomyces sp. oral taxon 170 str. F0386] Length = 403 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 117/253 (46%), Gaps = 28/253 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +L+ + + ++I+ T+ V+LL PL KQ ++ M+ +QP++ Sbjct: 14 WVMVTIHKGLVLIGFPDGPGIAWVLSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPEMK 73 Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----I 449 L+ K+K Q + + M+ LY+ H NP+A C PIL+Q+P+FFA+++V++ + Sbjct: 74 ALQAKYKGKKDPESRQRMNEEMMALYRKHGTNPMASCLPILVQMPIFFALFRVLASLGAV 133 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-------YLPGFMHVGIWPIIMSLSMF 502 + P G + A + ++FG + IIMS++ + Sbjct: 134 AGGTYGRPSIGPLTQQLA-EQVQASSVFGASLSSSFMSSADTQVKIVTVAMIIIMSVTQW 192 Query: 503 IQM-KMSPPPA--------DKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 M +++ + Q M++ MPV+F + +F G+++YW SN+ ++ Sbjct: 193 YTMAQLTMKNMSAESMDSDNPMIRSQRMMMYVMPVIFAISGVNFQIGVLVYWVISNLWTM 252 Query: 551 VQQAVIMKMHGAE 563 QQ ++ A Sbjct: 253 GQQFFTIRNMPAP 265 >gi|152968449|ref|YP_001364233.1| hypothetical protein Krad_4510 [Kineococcus radiotolerans SRS30216] gi|151362966|gb|ABS05969.1| 60 kDa inner membrane insertion protein [Kineococcus radiotolerans SRS30216] Length = 337 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 29/235 (12%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAM 415 + ++I+ V +++L PL KQ + M+ IQP++ +++ K+K Q +Q+ M Sbjct: 40 WSLSIVGLVVVIRILLIPLFVKQIKAMRGMQVIQPEMRKIQAKYKGKNDPASRQAMQQEM 99 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + LY+ NP+A C PILLQ P+F A++ ++ D D + T Sbjct: 100 MALYRESGTNPMASCLPILLQSPIFLALFHTLNGI----GKGETVGPLDRTLVDQADNAT 155 Query: 476 LFGILPFY----------LPGFMHVGIWPIIMSLSMFIQMKMSPP-----------PADK 514 +FG + + ++MSLS F+ K P + Sbjct: 156 IFGSQLSDIFMKSWSTGEWNTIILTAVMIVLMSLSQFVTQKQLMAKNTSSASMEGNPFAQ 215 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 Q M+L +PV+F + +FP G+++YW +NV S+ QQ +++ L ++ Sbjct: 216 QQKMMLYILPVIFAVSGVNFPIGVLLYWLTTNVWSMGQQFFVIRRMPNPGSLAEK 270 >gi|284993436|ref|YP_003411991.1| membrane protein insertase, YidC/Oxa1 family [Geodermatophilus obscurus DSM 43160] gi|284066682|gb|ADB77620.1| membrane protein insertase, YidC/Oxa1 family [Geodermatophilus obscurus DSM 43160] Length = 385 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 24/227 (10%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + ++I+ V V+++ FPL KQ S M+ +QP+I LR K S Q +AM+++ Sbjct: 38 WALSIVFLVVTVRVILFPLFVKQVKSQRAMQELQPEIARLR-KQYGSDRQGFSEAMLKMQ 96 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISI---------------SLEMRHAPFWG-WIK 463 + ++PLAGC PIL QIP+F +++ V+ + E APF+G I Sbjct: 97 RERGVSPLAGCLPILPQIPIFLSLFHVLRRLAPDAQGLYSWSAELTDEAARAPFFGAPIS 156 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-------Q 516 + + I Y + + +IMS + F K + Q Sbjct: 157 SSFFMSGSKEQAILDITGGYGQIRVVAFLLIVIMSFTTFFTQKQIMRRSGPVEGQAAMVQ 216 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M+L MP+ + FP G+++YW +N+ ++ QQ I++ Sbjct: 217 KMLLYVMPLGLFVSGFLFPIGVLLYWFTNNLWTLGQQFFILRKMPPP 263 >gi|289705892|ref|ZP_06502271.1| membrane protein insertase, YidC/Oxa1 family [Micrococcus luteus SK58] gi|289557377|gb|EFD50689.1| membrane protein insertase, YidC/Oxa1 family [Micrococcus luteus SK58] Length = 332 Score = 139 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 31/240 (12%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK---- 413 + ++I+L V ++ L PL KQ + M+ IQP++ +L+ K+K Q+ ++ Sbjct: 35 WTWALSILLLVVLIRTLLIPLFVKQIKAQRAMQAIQPELQKLQAKYKGKKDQLSRQAMAM 94 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 L K H NP A C P+L+Q+P FFA+Y+V+ + R A G D +A+ Sbjct: 95 EQQALMKEHKANPFAACLPLLVQMPFFFALYQVLLGA---RGAAERGEAMDALSAEQIRS 151 Query: 474 F---TLFGI-----------LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--------- 510 F T+FG P P + + ++MS SMF KM Sbjct: 152 FEGSTIFGARMSDTFMNSLGAPGSTPVIVTAIVLILLMSGSMFFMQKMLMTKNMTQQALT 211 Query: 511 -PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P + Q ++L MP++F +FP G+++YW++SN ++ QQ I++ + L ++ Sbjct: 212 GPMMQTQQVMLYAMPLIFGIGGINFPIGVLLYWTYSNFWAVGQQWWIIRNNPTPGSLAEK 271 >gi|326772847|ref|ZP_08232131.1| stage III sporulation protein J [Actinomyces viscosus C505] gi|326637479|gb|EGE38381.1| stage III sporulation protein J [Actinomyces viscosus C505] Length = 394 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 63/272 (23%), Positives = 123/272 (45%), Gaps = 33/272 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +L+ + + ++I+ T+ V+LL PL KQ ++ M+ +QP++ Sbjct: 14 WVMVTIHKALVLIGFPDGPGVAWVLSIIGLTIVVRLLIMPLFVKQIRASRGMQLLQPEMQ 73 Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----I 449 L+ K+K Q + + M+ LY+ H NP+A C PIL+Q+P+FFA+++V++ + Sbjct: 74 ALQAKYKGKKDPESRQRMNEEMMALYRKHGTNPMASCLPILVQMPIFFALFRVLASLGAV 133 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-------YLPGFMHVGIWPIIMSLSMF 502 + P G + A + ++FG + +IMS++ + Sbjct: 134 AAGKYGRPSIGPLTQQLA-EQVQASSVFGASLSSSFLGSSDTQVKIVTVAMIVIMSVTQW 192 Query: 503 IQM-KMSPPPA--------DKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 M ++S + Q M+L MPV+F + +F G+++YW SN+ ++ Sbjct: 193 YTMAQLSMKNMSTDSLNSDNPMIRSQRMMLYVMPVIFAVSGVNFQIGVLVYWVVSNLWTM 252 Query: 551 VQQAVIMKMHG-----AEIGLIDRLRSTFSKN 577 QQ ++ AE R+ + ++ Sbjct: 253 GQQFFTIRNMPAPGSEAEKKYRARINAKRARK 284 >gi|16081156|ref|NP_391984.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. 168] gi|7676172|sp|Q01625|OXAA1_BACSU RecName: Full=Membrane protein oxaA 1; AltName: Full=Stage III sporulation protein J; Flags: Precursor gi|40023|emb|CAA44401.1| unnamed protein product [Bacillus subtilis] gi|467388|dbj|BAA05234.1| stage III sporulation [Bacillus subtilis] gi|2636651|emb|CAB16141.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. subtilis str. 168] Length = 261 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 27/246 (10%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + P + Y + ++ N+G++I+L T+ ++LL Sbjct: 18 MLLAGCSSVKEPITADSPHFWDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLIL 77 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433 PL KQ S+ M+ +QP++ +L+EK+ Q LQ+ + L++ H +NPLAGC+PI Sbjct: 78 PLMIKQLRSSKAMQALQPEMQKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPI 137 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+ Y I + + + W DL DP I Sbjct: 138 LIQMPILIGFYHAIMRTQAI-SEHSFLWF-DLGEKDPYY-------------------IL 176 Query: 494 PIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 PI+ ++ F+Q K+ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 177 PIVAGVATFVQQKLMMAGNAQQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMI 236 Query: 551 VQQAVI 556 Q +I Sbjct: 237 AQTFLI 242 >gi|257470416|ref|ZP_05634507.1| inner membrane protein [Fusobacterium ulcerans ATCC 49185] gi|317064624|ref|ZP_07929109.1| inner membrane protein oxaA [Fusobacterium ulcerans ATCC 49185] gi|313690300|gb|EFS27135.1| inner membrane protein oxaA [Fusobacterium ulcerans ATCC 49185] Length = 208 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 64/224 (28%), Positives = 120/224 (53%), Gaps = 22/224 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 G + + + ++ + ++L GNFG+AI+ T+ +K++ PL KQ S +MK +QP+ Sbjct: 5 SGIYGLLKGVIEAMLVFMHHLTGNFGLAIIGVTILMKIILLPLTLKQDKSMKSMKKLQPE 64 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 +D+L+EK+K P++L + ++LY+ H +NP GC P+L+Q+P+ +A++ V+ + + Sbjct: 65 LDKLKEKYKG-DPKMLNQKTMELYQQHKVNPAGGCLPLLVQLPILWALFGVLRGGI-VPQ 122 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + W++ L DP I P++ + F+Q K+ + Sbjct: 123 DSTFLWME-LVKPDPFY-------------------ILPVLNGVVSFVQQKVMGSSDNPQ 162 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ P++ VF PAGL IYW S++ ++QQ +IMK Sbjct: 163 MKNMMYMFPIMMVFISYKMPAGLQIYWLTSSLAGVIQQYLIMKR 206 >gi|291486743|dbj|BAI87818.1| OxaA-like protein precursor [Bacillus subtilis subsp. natto BEST195] Length = 260 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 27/246 (10%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + P + Y + ++ N+G++I+L T+ ++LL Sbjct: 17 MLLAGCSSVKEPITADSPHFWDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLIL 76 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433 PL KQ S+ M+ +QP++ +L+EK+ Q LQ+ + L++ H +NPLAGC+PI Sbjct: 77 PLMIKQLRSSKAMQALQPEMQKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPI 136 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+ Y I + + + W DL DP I Sbjct: 137 LIQMPILIGFYHAIMRTQAI-SEHSFLWF-DLGEKDPYY-------------------IL 175 Query: 494 PIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 PI+ ++ F+Q K+ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 176 PIVAGVATFVQQKLMMAGNAQQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMI 235 Query: 551 VQQAVI 556 Q +I Sbjct: 236 AQTFLI 241 >gi|282853036|ref|ZP_06262373.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes J139] gi|282582489|gb|EFB87869.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes J139] gi|314922673|gb|EFS86504.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL001PA1] gi|314965757|gb|EFT09856.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL082PA2] gi|314982899|gb|EFT26991.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL110PA3] gi|315091205|gb|EFT63181.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL110PA4] gi|315094439|gb|EFT66415.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL060PA1] gi|327328934|gb|EGE70694.1| membrane protein OxaA [Propionibacterium acnes HL103PA1] Length = 359 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 120/275 (43%), Gaps = 23/275 (8%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 ++ + L + + + ++ +AI+ T Sbjct: 1 MLNPLVILSLGGALHTMGHAIMVPLYWAVSGLLVLFHYLWSPLFGRDSGISWTLAIVCLT 60 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 +F++LL PL KQ S +M+ IQPK+ ++EK+ + + M+ LY+ +NP A Sbjct: 61 IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYREEGVNPAA 119 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI-KDLAAADPTNIFTLFG--------- 478 C P+LLQ+P+F A+++V+ + R P + K+ + FG Sbjct: 120 SCLPVLLQMPIFLALFRVLDGA--SRGIPRGHFFAKNPGLMESLQHAKFFGAELAGRFLP 177 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFV 528 + + + + IIM ++F + + PP Q ++ + P++++ Sbjct: 178 MNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYL 237 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F+ SFP G+++YW SN+ ++ QQ ++++ + Sbjct: 238 FSGVSFPIGVMLYWCTSNLWTLGQQEILIRNNPTP 272 >gi|78043134|ref|YP_358876.1| sporulation associated-membrane protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995249|gb|ABB14148.1| sporulation associated-membrane protein [Carboxydothermus hydrogenoformans Z-2901] Length = 223 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 114/203 (56%), Gaps = 22/203 (10%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + ++ +AI++ T+ +K++ +PL Q S M+ +QPK+ E+++K+K PQ Q+A++ Sbjct: 24 IPSYALAIIMLTILIKIILYPLNHAQMKSMKVMQELQPKMQEIQKKYKN-DPQKQQQALM 82 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAAADPTNIFT 475 +LYK + +NP++GC P+L+Q+P+ A+Y+ + + A + WI +++ DP Sbjct: 83 ELYKEYGVNPMSGCLPMLIQLPILIALYRALYNFKYLNPAHAKFFWIANISHKDPYF--- 139 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSF 534 I PI+ +L+ +IQ +M+ D Q ++L MP++ + S Sbjct: 140 ----------------ILPILAALTTYIQSRMTMTSGNDPNQKVMLYVMPLMIGWIAMSL 183 Query: 535 PAGLIIYWSWSNVISIVQQAVIM 557 PAGL IYW N++ I+QQ + Sbjct: 184 PAGLGIYWVVLNIMGIIQQYFVN 206 >gi|221312087|ref|ZP_03593934.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. 168] gi|221316412|ref|ZP_03598217.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221325608|ref|ZP_03606902.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. SMY] gi|321313665|ref|YP_004205952.1| OxaA-like protein [Bacillus subtilis BSn5] gi|580918|emb|CAA78595.1| SpoIIIJ [Bacillus subtilis subsp. subtilis str. 168] gi|320019939|gb|ADV94925.1| OxaA-like protein precursor [Bacillus subtilis BSn5] Length = 259 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 27/246 (10%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + P + Y + ++ N+G++I+L T+ ++LL Sbjct: 16 MLLAGCSSVKEPITADSPHFWDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLIL 75 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433 PL KQ S+ M+ +QP++ +L+EK+ Q LQ+ + L++ H +NPLAGC+PI Sbjct: 76 PLMIKQLRSSKAMQALQPEMQKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPI 135 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+ Y I + + + W DL DP I Sbjct: 136 LIQMPILIGFYHAIMRTQAI-SEHSFLWF-DLGEKDPYY-------------------IL 174 Query: 494 PIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 PI+ ++ F+Q K+ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 175 PIVAGVATFVQQKLMMAGNAQQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMI 234 Query: 551 VQQAVI 556 Q +I Sbjct: 235 AQTFLI 240 >gi|16804891|ref|NP_466376.1| hypothetical protein lmo2854 [Listeria monocytogenes EGD-e] gi|46909042|ref|YP_015431.1| SpoJ protein [Listeria monocytogenes serotype 4b str. F2365] gi|47097239|ref|ZP_00234801.1| spoJ protein [Listeria monocytogenes str. 1/2a F6854] gi|224498310|ref|ZP_03666659.1| SpoJ protein [Listeria monocytogenes Finland 1988] gi|224503080|ref|ZP_03671387.1| SpoJ protein [Listeria monocytogenes FSL R2-561] gi|226225403|ref|YP_002759510.1| SpoIIIJ protein [Listeria monocytogenes Clip81459] gi|254824783|ref|ZP_05229784.1| spoJ protein [Listeria monocytogenes FSL J1-194] gi|254827421|ref|ZP_05232108.1| spoJ protein [Listeria monocytogenes FSL N3-165] gi|254830711|ref|ZP_05235366.1| SpoIIIJ protein [Listeria monocytogenes 10403S] gi|254851844|ref|ZP_05241192.1| spoJ protein [Listeria monocytogenes FSL R2-503] gi|254899689|ref|ZP_05259613.1| SpoIIIJ protein [Listeria monocytogenes J0161] gi|254913108|ref|ZP_05263120.1| spoJ protein [Listeria monocytogenes J2818] gi|254930872|ref|ZP_05264231.1| spoJ protein [Listeria monocytogenes HPB2262] gi|254937489|ref|ZP_05269186.1| OxaA-like protein [Listeria monocytogenes F6900] gi|255520073|ref|ZP_05387310.1| SpoIIIJ protein [Listeria monocytogenes FSL J1-175] gi|284800259|ref|YP_003412124.1| hypothetical protein LM5578_0004 [Listeria monocytogenes 08-5578] gi|284993444|ref|YP_003415212.1| hypothetical protein LM5923_0004 [Listeria monocytogenes 08-5923] gi|300763388|ref|ZP_07073386.1| spoJ protein [Listeria monocytogenes FSL N1-017] gi|38503109|sp|Q8Y3I2|OXAA1_LISMO RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|67461022|sp|Q71VQ8|OXAA1_LISMF RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|16412354|emb|CAD01067.1| lmo2854 [Listeria monocytogenes EGD-e] gi|46882315|gb|AAT05608.1| spoJ protein [Listeria monocytogenes serotype 4b str. F2365] gi|47014394|gb|EAL05365.1| spoJ protein [Listeria monocytogenes str. 1/2a F6854] gi|225877865|emb|CAS06580.1| Putative SpoIIIJ protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258599799|gb|EEW13124.1| spoJ protein [Listeria monocytogenes FSL N3-165] gi|258605137|gb|EEW17745.1| spoJ protein [Listeria monocytogenes FSL R2-503] gi|258610091|gb|EEW22699.1| OxaA-like protein [Listeria monocytogenes F6900] gi|284055821|gb|ADB66762.1| hypothetical protein LM5578_0004 [Listeria monocytogenes 08-5578] gi|284058911|gb|ADB69850.1| hypothetical protein LM5923_0004 [Listeria monocytogenes 08-5923] gi|293582417|gb|EFF94449.1| spoJ protein [Listeria monocytogenes HPB2262] gi|293591110|gb|EFF99444.1| spoJ protein [Listeria monocytogenes J2818] gi|293594022|gb|EFG01783.1| spoJ protein [Listeria monocytogenes FSL J1-194] gi|300515665|gb|EFK42714.1| spoJ protein [Listeria monocytogenes FSL N1-017] gi|328468319|gb|EGF39325.1| hypothetical protein LM1816_03412 [Listeria monocytogenes 1816] gi|332313283|gb|EGJ26378.1| Membrane protein oxaA 1 [Listeria monocytogenes str. Scott A] Length = 287 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 27/232 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + + + + G++ + I++ T+ ++LL PL KQ S M N+QPKI EL Sbjct: 45 YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 104 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L DP I P++ +L+ F+ K+S + Sbjct: 165 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 255 >gi|295400330|ref|ZP_06810309.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus thermoglucosidasius C56-YS93] gi|312111144|ref|YP_003989460.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y4.1MC1] gi|294977605|gb|EFG53204.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus thermoglucosidasius C56-YS93] gi|311216245|gb|ADP74849.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y4.1MC1] Length = 251 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 28/252 (11%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 + P E YF+ +L++ + N+G+AI++ T+ V+ PL KQ+ Sbjct: 19 NRNAPIDEHSQGIWDHYFVYPMSKLLLTLGHFFGNNYGVAIIVLTLIVRFCLLPLMIKQF 78 Query: 384 VSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 +T M+ ++P++ +L+EK+K + + LQ+ M+QLY+ H +NP +GC P+L+Q P+F Sbjct: 79 KTTIAMQKLRPELQKLQEKYKGTDLEAQRKLQQEMMQLYQKHGVNPASGCLPVLIQTPIF 138 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y I + E++ + W++ L DP I PI+ SL+ Sbjct: 139 MALYYAILRTQEIKLHS-FLWVQ-LGHRDPYF-------------------ILPILASLT 177 Query: 501 MFIQMKMSPPPAD---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FI +++SP + AM+ MP++ SS P+ L +YW SI+Q +I+ Sbjct: 178 TFISLRLSPSMTEEQMPQMAMMSYIMPIMIFIGASSVPSALSLYWVVGGCFSIIQS-LIL 236 Query: 558 KMHGAEIGLIDR 569 +M + + Sbjct: 237 RMQLKAVKAAEN 248 >gi|254384778|ref|ZP_05000115.1| inner membrane protein [Streptomyces sp. Mg1] gi|194343660|gb|EDX24626.1| inner membrane protein [Streptomyces sp. Mg1] Length = 367 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 26/248 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + +G++I+ + +++ PL KQ +T M+ +QPK+ Sbjct: 17 WVIVQFHSVYGAIFGADSGWAWGLSIVSLVILIRICLIPLFVKQIKATRGMQALQPKMKA 76 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEM 453 ++E++K Q + M++LYK NPL+ C PIL Q P FFA+Y V+S ++ + Sbjct: 77 IQERYKNDK-QRQSEEMMKLYKETGTNPLSSCLPILAQSPFFFALYHVLSAIANGQTIGV 135 Query: 454 ---------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 R A +G LAA + + + + ++MSLS F Sbjct: 136 INQSLLESARQAHIFG--APLAAKFTDSAEKAASLNASITDVRIVTAVMIVLMSLSQFYT 193 Query: 505 MKMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + P + Q M++ PV+F +FP G+++YW +NV ++ QQ Sbjct: 194 QRQLMQKNVDLSVKTPFMQQQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMY 253 Query: 556 IMKMHGAE 563 ++ + Sbjct: 254 VINQNPTP 261 >gi|315105159|gb|EFT77135.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL050PA2] Length = 359 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 59/275 (21%), Positives = 120/275 (43%), Gaps = 23/275 (8%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 ++ + L + + + ++ +AI+ T Sbjct: 1 MLNPLVILSLGGALHTMGHAIMVPLYWAVSGLLVLFHYLWSPLFGRDSGISWTLAIVCLT 60 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 +F++LL PL KQ S +M+ IQPK+ ++EK+ + + M+ LY+ +NP A Sbjct: 61 IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYREEGVNPAA 119 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI-KDLAAADPTNIFTLFG--------- 478 C P+LLQ+P+F A+++V+ + R P + K+ + FG Sbjct: 120 SCLPVLLQMPIFLALFRVLDGA--SRGIPRGHFFAKNPGLMESLQHAKFFGAELAGRFLP 177 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFV 528 + + + + IIM ++F + + PP Q I+ + P++++ Sbjct: 178 MNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPESLTGPMAQQQKIMIYLFPLMYL 237 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F+ SFP G+++YW SN+ ++ QQ ++++ + Sbjct: 238 FSGVSFPIGVMLYWCTSNLWTLGQQEILIRNNPTP 272 >gi|119718914|ref|YP_925879.1| putative inner membrane protein translocase component YidC [Nocardioides sp. JS614] gi|119539575|gb|ABL84192.1| 60 kDa inner membrane insertion protein [Nocardioides sp. JS614] Length = 363 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 111/238 (46%), Gaps = 18/238 (7%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + ++I+ T+ V+ L PL KQ S+ NM+ IQPK+ EL++K+ + L + ++LY Sbjct: 43 WVLSIIGLTLTVRALLIPLFVKQIKSSRNMQLIQPKVKELQKKY-GHDRERLAQETMKLY 101 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF----- 474 K NP A C P+++Q+P+F A+++++ R KDLA + + Sbjct: 102 KDSGTNPFASCLPLIIQMPIFLALFRLLDKHAA-RGDGKAFITKDLAESFQSADLFSVPL 160 Query: 475 -TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM----SPPP-----ADKGQAMILNW-M 523 F + I + M+ + F + + PP Q +L + + Sbjct: 161 KATFLRNDGSTAVMVVAAILVLAMTATTFTTQRQLMSKNMPPDALSGPYAQQQKLLLYVL 220 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 PVVF +FP ++ YW+ SN+ ++ QQ +++ + A + ++ + ++ Sbjct: 221 PVVFAVGGIAFPVAVLFYWTTSNLWTMGQQFYVIRNNPAPGTAAAQAKADRDRAKAAR 278 >gi|163119737|ref|YP_081441.2| OxaA-like protein [Bacillus licheniformis ATCC 14580] gi|145903248|gb|AAU25803.2| SpoIIIJ protein involved in stage III sporulation [Bacillus licheniformis ATCC 14580] Length = 266 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 111/255 (43%), Gaps = 27/255 (10%) Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 L + ++ P + Y + ++ NFG+AI++ Sbjct: 9 LLFSMIGVIVLLAGCTEINQPITAESEGFWNTYIVYPLSQLITYVANLTNENFGLAIIIV 68 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNI 424 T+ ++LL PL KQ S+ M+ +QP++ +LREK+ Q LQ+ + L + H + Sbjct: 69 TILIRLLILPLMIKQTKSSKAMQALQPEMQKLREKYSSKDQKTQQKLQQETMALMQKHGV 128 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NPLAGC+PIL+Q+P+ Y I + E+ + W DL DP Sbjct: 129 NPLAGCFPILIQMPILIGFYHAIMRTREIA-EHSFLWF-DLGERDPYF------------ 174 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 I PI+ + FIQ K+ + AM+L MP++ V SFPA L +Y Sbjct: 175 -------ILPILAGVFTFIQQKLMMAGTAQQNPQMAMMLWLMPIMIVVFAISFPAALSLY 227 Query: 542 WSWSNVISIVQQAVI 556 W N+ I Q I Sbjct: 228 WVVGNLFMIAQTFFI 242 >gi|50843790|ref|YP_057017.1| putative inner membrane protein translocase component YidC [Propionibacterium acnes KPA171202] gi|289424430|ref|ZP_06426213.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes SK187] gi|295131878|ref|YP_003582541.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes SK137] gi|50841392|gb|AAT84059.1| conserved membrane protein [Propionibacterium acnes KPA171202] gi|289155127|gb|EFD03809.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes SK187] gi|291377350|gb|ADE01205.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes SK137] gi|313771070|gb|EFS37036.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL074PA1] gi|313792572|gb|EFS40658.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL110PA1] gi|313803573|gb|EFS44755.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL110PA2] gi|313811765|gb|EFS49479.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL083PA1] gi|313814225|gb|EFS51939.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL025PA1] gi|313815413|gb|EFS53127.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL059PA1] gi|313829185|gb|EFS66899.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL063PA2] gi|313832299|gb|EFS70013.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL007PA1] gi|313832759|gb|EFS70473.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL056PA1] gi|313839618|gb|EFS77332.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL086PA1] gi|314916209|gb|EFS80040.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL005PA4] gi|314917476|gb|EFS81307.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL050PA1] gi|314921812|gb|EFS85643.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL050PA3] gi|314930923|gb|EFS94754.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL067PA1] gi|314955281|gb|EFS99686.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL027PA1] gi|314959154|gb|EFT03256.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL002PA1] gi|314963877|gb|EFT07977.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL082PA1] gi|314969087|gb|EFT13185.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL037PA1] gi|314975194|gb|EFT19289.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL053PA1] gi|314977606|gb|EFT21701.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL045PA1] gi|314985207|gb|EFT29299.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL005PA1] gi|315078989|gb|EFT51001.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL053PA2] gi|315081501|gb|EFT53477.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL078PA1] gi|315097166|gb|EFT69142.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL038PA1] gi|315099346|gb|EFT71322.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL059PA2] gi|315102313|gb|EFT74289.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL046PA1] gi|315107502|gb|EFT79478.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL030PA1] gi|315109870|gb|EFT81846.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL030PA2] gi|327332496|gb|EGE74231.1| membrane protein OxaA [Propionibacterium acnes HL096PA2] gi|327446727|gb|EGE93381.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL043PA2] gi|327448831|gb|EGE95485.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL043PA1] gi|327454248|gb|EGF00903.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL087PA3] gi|327456308|gb|EGF02963.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL083PA2] gi|327457418|gb|EGF04073.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL092PA1] gi|328756006|gb|EGF69622.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL087PA1] gi|328758849|gb|EGF72465.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL025PA2] gi|328759807|gb|EGF73398.1| membrane protein OxaA [Propionibacterium acnes HL099PA1] Length = 359 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 120/275 (43%), Gaps = 23/275 (8%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 ++ + L + + + ++ +AI+ T Sbjct: 1 MLNPLVILSLGGALHTMGHAIMVPLYWAVSGLLVLFHYLWSPLFGRDSGISWTLAIVCLT 60 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 +F++LL PL KQ S +M+ IQPK+ ++EK+ + + M+ LY+ +NP A Sbjct: 61 IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYREEGVNPAA 119 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI-KDLAAADPTNIFTLFG--------- 478 C P+LLQ+P+F A+++V+ + R P + K+ + FG Sbjct: 120 SCLPVLLQMPIFLALFRVLDGA--SRGIPRGHFFAKNPGLMESLQHAKFFGAELAGRFLP 177 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFV 528 + + + + IIM ++F + + PP Q ++ + P++++ Sbjct: 178 MNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYL 237 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F+ SFP G+++YW SN+ ++ QQ ++++ + Sbjct: 238 FSGVSFPIGVMLYWCTSNLWTLGQQEILIRNNPTP 272 >gi|56420357|ref|YP_147675.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426] gi|56380199|dbj|BAD76107.1| stage III sporulation protein J [Geobacillus kaustophilus HTA426] Length = 249 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 72/245 (29%), Positives = 126/245 (51%), Gaps = 27/245 (11%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 + P E YF+ +L++ + N+GIAI++ T+ V+ PL KQ+ Sbjct: 19 NRNEPINEHSQGIWNHYFVYPMSKLLLTLGHWFGDNYGIAIIVLTLIVRFCLLPLILKQF 78 Query: 384 VSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 ++ M+ ++P++ +L+EK+K P + LQ+ M+QLY+ H +NP +GC P+L+Q+P+F Sbjct: 79 RASLAMQKLRPELLKLQEKYKSKDPETQRKLQQEMMQLYQKHGVNPASGCLPVLIQMPIF 138 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y IS + E++ + W++ L DP I P++ +L+ Sbjct: 139 MALYYAISRTQEIKTHS-FLWVE-LGHRDPYF-------------------ILPVLAALT 177 Query: 501 MFIQMKMSPPPAD---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FI +++SP A+ AM+L MPV+ SS P+ L +YW SI+Q ++ Sbjct: 178 TFISLRLSPSMAEEQMPQMAMMLYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLILR 237 Query: 558 KMHGA 562 A Sbjct: 238 SQLKA 242 >gi|314929150|gb|EFS92981.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL044PA1] gi|328905781|gb|EGG25557.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium sp. P08] Length = 359 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 118/266 (44%), Gaps = 23/266 (8%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + + L + + + ++ +AI+ T+F++LL P Sbjct: 10 LGGALHAMGHAIMVPLYWAVSGLIVLFHYLWSPLFGRDSGISWTLAIVCLTIFIRLLLVP 69 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 L KQ S +M+ IQPK+ ++EK+ + + M+ LY+ +NP A C P+LLQ+ Sbjct: 70 LFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYREEGVNPAASCLPVLLQM 128 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIK-DLAAADPTNIFTLFG---------ILPFYLPGF 487 P+F A+++V+ + R P + + + FG + + Sbjct: 129 PIFLALFRVLDGA--SRGIPRGHFFAENPKLMESLQHAKFFGAELAGRFLPMNNGFGGTQ 186 Query: 488 MHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFVFALSSFPAG 537 + + ++M ++F + + PP Q ++ + P++++F+ SFP G Sbjct: 187 VVALVLIVVMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYLFSGVSFPIG 246 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563 +++YW SN+ ++ QQ ++++ + Sbjct: 247 VMLYWCTSNLWTLGQQEILIRNNPTP 272 >gi|225424558|ref|XP_002282031.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296081405|emb|CBI16838.3| unnamed protein product [Vitis vinifera] Length = 539 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 24/278 (8%) Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLT 367 T+ + D A+ + W I M ++ ++ +G AI+L Sbjct: 67 RVETLLYTIADAAVSASDGKQSGDWLSGITNYMETVLKVLKGGLSTLHVPYAYGFAIILL 126 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 TV VK FPL KKQ S M+++QP+I +++++ + +Q +LYK INPL Sbjct: 127 TVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQRYAG-DQERIQLETARLYKLAGINPL 185 Query: 428 AGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP-------TNIFTLF-- 477 AGC P L IPV+ +Y+ +S + E + WI L+ + I LF Sbjct: 186 AGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLSGPTTIAARQNGSGISWLFPF 245 Query: 478 --GILPFYLPGFMHVGIWPIIMSLSMFI--QMKMSPPPADK---GQAMILNWMPVVFVFA 530 G P + + P+++ +S +I Q+ S D + ++P++ + Sbjct: 246 VDGHPPLGWSDTLAYLVLPMLLIVSQYISVQIMQSSQSNDPSLKTSQALTKFLPLMIGYF 305 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 S P+GL +YW +N++S QQ + K+ GA+I + Sbjct: 306 ALSVPSGLSLYWFTNNILSTAQQVWLQKLGGAQIPVKQ 343 >gi|323341096|ref|ZP_08081344.1| stage III sporulation protein J [Lactobacillus ruminis ATCC 25644] gi|323091517|gb|EFZ34141.1| stage III sporulation protein J [Lactobacillus ruminis ATCC 25644] Length = 268 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 110/252 (43%), Gaps = 31/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + N+G I++ T+ V+++ PL Q S IQP++ Sbjct: 26 WDHYIIWNFIRAIQGLSRIFGHNYGWGIVVFTIIVRIIILPLMIYQMKSMRKTTEIQPQL 85 Query: 397 DELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 L++K+ +++ + +LY +NP+AGC P+L+Q+P+ A+Y+ I S Sbjct: 86 MALQKKYPDRSDPEQMRMMSEEQKRLYAEAGVNPVAGCLPLLVQMPILIALYQAIFRSET 145 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 ++ + W++ L DP I PI+ ++ F+ +S Sbjct: 146 LK-TGKFLWMQ-LGDKDPYY-------------------ILPILAAIFTFLTSWLSVKAQ 184 Query: 513 DKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + AM ++ +MP++ + S PA L +YW +N S+ Q +I + +I Sbjct: 185 PEKNAMTTGMMVFMPLMILVTAISVPAALSLYWVVTNAFSVGQTLLIN--NPFKIQRERE 242 Query: 570 LRSTFSKNYNSQ 581 ++ K + Sbjct: 243 EKARLEKKKARK 254 >gi|168063889|ref|XP_001783900.1| predicted protein [Physcomitrella patens subsp. patens] gi|162664583|gb|EDQ51297.1| predicted protein [Physcomitrella patens subsp. patens] Length = 321 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 66/245 (26%), Positives = 120/245 (48%), Gaps = 22/245 (8%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 + ++G AI+L T+ VK +PL KKQ ST M+N+QPKI ++ +++ + +Q Sbjct: 34 IPYSYGFAIILLTILVKAATYPLTKKQVESTLAMQNLQPKIKAIQTRYQG-DQERIQLET 92 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIF 474 +LYK +NPLAGC P L +PV+ +Y+ +S + E + WI LA Sbjct: 93 ARLYKQAGVNPLAGCLPTLATLPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAAR 152 Query: 475 TLFGILPFYLPGF-----------MHVGIWPIIMSLSMFIQMKMSPPPA--DKGQ---AM 518 + + + P + + P+++ S ++ M++ PP D Q + Sbjct: 153 SSGSGISWLFPFVDGAPSLGWADTIAYLVLPVLLIGSQYVSMQIMQPPTTNDPAQNQSQL 212 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI----DRLRSTF 574 IL ++P++ + S P+GL +YW +NV+S QQ + ++ GA+ + + + Sbjct: 213 ILKFLPLMIGYFSLSVPSGLSLYWLTNNVLSTAQQVYLRQLGGAQPIVDKEGSGIISAGQ 272 Query: 575 SKNYN 579 +K Sbjct: 273 AKRTP 277 >gi|168046980|ref|XP_001775950.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672782|gb|EDQ59315.1| predicted protein [Physcomitrella patens subsp. patens] Length = 313 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 71/246 (28%), Positives = 121/246 (49%), Gaps = 23/246 (9%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 L ++G AI+L TV VK +PL KKQ ST M+N+QPKI ++ +++ + +Q Sbjct: 60 LPYSYGFAIILLTVIVKAATYPLTKKQVESTLAMQNLQPKIKAIQTRYQG-DQERIQLET 118 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP---- 470 +LYK +NPLAGC P L +PV+ +Y+ +S + E + WI LA Sbjct: 119 ARLYKQAGVNPLAGCLPTLATLPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAAR 178 Query: 471 ---TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQ---A 517 + I LF G P + + P+++ S ++ M++ P D Q Sbjct: 179 SSGSGISWLFPFVDGAPPLGWGDTIAYLVLPVLLIGSQYVSMQIMQPATASNDPAQNQSQ 238 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI----DRLRST 573 +IL ++P++ + S P+GL +YW +NV+S QQ + ++ GA+ + + + Sbjct: 239 LILKFLPLMIGYFSLSVPSGLSLYWLTNNVLSTAQQVYLRQLGGAQPIVDKEGSGIISAG 298 Query: 574 FSKNYN 579 +K Sbjct: 299 QAKRTP 304 >gi|56965876|ref|YP_177610.1| stage III sporulation protein J [Bacillus clausii KSM-K16] gi|56912122|dbj|BAD66650.1| stage III sporulation protein J [Bacillus clausii KSM-K16] Length = 284 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 24/246 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W F P+ L+ V ++G AI++ TV +++ PL KQ S M+ +QP++ Sbjct: 34 IWNSFFVYPLSRLIILIAGWVSSYGWAIIVVTVLFRIVLLPLMVKQTKSMKAMQQLQPEM 93 Query: 397 DELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +LR+K+ + M +L+ H +NP AGC P+L+Q+P+F AIY I + Sbjct: 94 QKLRQKYSAKDKNTQMQLNTEMQKLFSEHKVNPFAGCLPLLVQMPIFLAIYHAIMRTPNF 153 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + + W L DP I P++ + FIQ KM + Sbjct: 154 QGES-FAWFV-LNNPDPYF-------------------ILPVLACILTFIQQKMMMVQDN 192 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 ++L MP++ + PA +I+YW N+ I+Q I + + GL + + Sbjct: 193 PQMKILLYAMPIMILVVGIFLPAAVILYWVVGNIFMIMQTYFITGPNAGKRGLEATVETA 252 Query: 574 FSKNYN 579 + Sbjct: 253 AASKAK 258 >gi|52788049|ref|YP_093878.1| OxaA-like protein precursor [Bacillus licheniformis ATCC 14580] gi|319648516|ref|ZP_08002732.1| SpoIIIJ protein [Bacillus sp. BT1B_CT2] gi|52350551|gb|AAU43185.1| SpoIIIJ [Bacillus licheniformis ATCC 14580] gi|317389595|gb|EFV70406.1| SpoIIIJ protein [Bacillus sp. BT1B_CT2] Length = 265 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 111/255 (43%), Gaps = 27/255 (10%) Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 L + ++ P + Y + ++ NFG+AI++ Sbjct: 8 LLFSMIGVIVLLAGCTEINQPITAESEGFWNTYIVYPLSQLITYVANLTNENFGLAIIIV 67 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNI 424 T+ ++LL PL KQ S+ M+ +QP++ +LREK+ Q LQ+ + L + H + Sbjct: 68 TILIRLLILPLMIKQTKSSKAMQALQPEMQKLREKYSSKDQKTQQKLQQETMALMQKHGV 127 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NPLAGC+PIL+Q+P+ Y I + E+ + W DL DP Sbjct: 128 NPLAGCFPILIQMPILIGFYHAIMRTREIA-EHSFLWF-DLGERDPYF------------ 173 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 I PI+ + FIQ K+ + AM+L MP++ V SFPA L +Y Sbjct: 174 -------ILPILAGVFTFIQQKLMMAGTAQQNPQMAMMLWLMPIMIVVFAISFPAALSLY 226 Query: 542 WSWSNVISIVQQAVI 556 W N+ I Q I Sbjct: 227 WVVGNLFMIAQTFFI 241 >gi|47093230|ref|ZP_00231003.1| spoJ protein [Listeria monocytogenes str. 4b H7858] gi|47018424|gb|EAL09184.1| spoJ protein [Listeria monocytogenes str. 4b H7858] Length = 267 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 27/232 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + + + + G++ + I++ T+ ++LL PL KQ S M N+QPKI EL Sbjct: 25 YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 84 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 85 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 144 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L DP I P++ +L+ F+ K+S + Sbjct: 145 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 183 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + Sbjct: 184 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 235 >gi|313835175|gb|EFS72889.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL037PA2] gi|314970899|gb|EFT14997.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL037PA3] Length = 359 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 118/275 (42%), Gaps = 23/275 (8%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 + + L + + + ++ +AI+ T Sbjct: 1 MLNPLVIFGLGGALHAMGHAIMVPLYWAVSGLIVLFHYLWSPLFGRDSGISWTLAIVCLT 60 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 +F++LL PL KQ S +M+ IQPK+ ++EK+ + + M+ LY+ +NP A Sbjct: 61 IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYREEGVNPAA 119 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK-DLAAADPTNIFTLFG--------- 478 C P+LLQ+P+F A+++V+ + R P + + + FG Sbjct: 120 SCLPVLLQMPIFLALFRVLDGA--SRGIPRGHFFAENPKLMESLQHAKFFGAELAGRFLP 177 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFV 528 + + + + ++M ++F + + PP Q ++ + P++++ Sbjct: 178 MNNGFGGTQVVALVLIVVMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYL 237 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F+ SFP G+++YW SN+ ++ QQ ++++ + Sbjct: 238 FSGVSFPIGVMLYWCTSNLWTLGQQEILIRNNPTP 272 >gi|256833763|ref|YP_003162490.1| 60 kDa inner membrane insertion protein [Jonesia denitrificans DSM 20603] gi|256687294|gb|ACV10187.1| 60 kDa inner membrane insertion protein [Jonesia denitrificans DSM 20603] Length = 315 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 118/267 (44%), Gaps = 23/267 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++ F+ + + +A++ T+ +++L PL KQ ++ M+ IQP++ Sbjct: 16 WIMYLCHTFFVFLGLPDGSGVAWILAVVGLTIVIRVLIIPLFFKQIKASRAMQMIQPELQ 75 Query: 398 ELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +++K+K + + + + LY H NPLA C PILLQ P+FF +++V++ E+ Sbjct: 76 AIQKKYKNKTDPASREAMGRETMALYSKHGTNPLASCMPILLQTPIFFGLFRVLNGLDEI 135 Query: 454 R-HAPFWGWIK-------DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 G I + + ++ + F P + + ++M +++I Sbjct: 136 AAGGSAIGPINTEVATQIENSQLFGASLSSTFLHEPTDPNTKIVSAVLIVLMCATLYITQ 195 Query: 506 K---MSPPPADKGQ------AMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + M PA Q I+ ++ P + + +FP G++IYW SN+ S QQ Sbjct: 196 RQLTMKNMPASAMQGPMAQTQKIMLYLIPGMMAVSGVNFPIGVLIYWVVSNLWSTGQQFY 255 Query: 556 -IMKMHGAEIGLIDRLRSTFSKNYNSQ 581 I +M R+ ++ + Sbjct: 256 TINRMPTPGSEAEKRMNERKARKAAKK 282 >gi|313765030|gb|EFS36394.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL013PA1] Length = 359 Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 120/275 (43%), Gaps = 23/275 (8%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 ++ + L + + + ++ +AI+ T Sbjct: 1 MLNPLVILSLGGALHTMGHAIMVPLYWAVSGLLVLFHYLWSPLFGRDSGISWTLAIVCLT 60 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 +F++LL PL KQ S +M+ IQPK+ ++EK+ + + M+ LY+ +NP A Sbjct: 61 IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYRDEGVNPAA 119 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI-KDLAAADPTNIFTLFG--------- 478 C P+LLQ+P+F A+++V+ + R P + K+ + FG Sbjct: 120 SCLPVLLQMPIFLALFRVLDGA--SRGIPRGHFFAKNPGLMESLQHAKFFGAELAGRFLP 177 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFV 528 + + + + IIM ++F + + PP Q ++ + P++++ Sbjct: 178 MNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYL 237 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F+ SFP G+++YW SN+ ++ QQ ++++ + Sbjct: 238 FSGVSFPIGVMLYWCTSNLWTLGQQEILIRNNPTP 272 >gi|255326485|ref|ZP_05367567.1| 60 kDa inner membrane insertion protein [Rothia mucilaginosa ATCC 25296] gi|255296525|gb|EET75860.1| 60 kDa inner membrane insertion protein [Rothia mucilaginosa ATCC 25296] Length = 329 Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 105/252 (41%), Gaps = 24/252 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 ++ +F + + + I+ T+ ++ L PL KQ + M +Q Sbjct: 15 VSVVLWLFHTLFTSLGMDPASGLTWVLCIIFLTLVMRTLTIPLFVKQIKAMRGMTAMQGD 74 Query: 396 IDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + +L+EK+K Q + + +++Y+ H NP A C PIL Q+P+FF +Y+V+ Sbjct: 75 MAKLQEKYKGKKDQLSRQAMAQEQMEMYRKHGTNPFASCLPILAQMPIFFGLYQVLMGVP 134 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPF----------YLPGFMHVGIWPIIMSLSM 501 + + N +FG F + I ++MS + Sbjct: 135 TAAQSNESVLMLPADLVHQFNDSQIFGAQLFATMLHPGAGDTTATVVQAVIMIVLMSATQ 194 Query: 502 FIQMKM----SPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 F K + P + Q MI+ P++F + +FP G++ YW+ SN+ S+ Sbjct: 195 FYIQKQLSVKNMSEAALNSPMFRQQQMIMYIFPIIFAVSGINFPLGVMYYWTVSNLWSLG 254 Query: 552 QQAVIMKMHGAE 563 QQ +++ + Sbjct: 255 QQWWVIRNNPTP 266 >gi|289436080|ref|YP_003465952.1| stage III sporulation protein J [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172324|emb|CBH28870.1| stage III sporulation protein J [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 287 Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 31/251 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + +++ + G++ + I++ T+ ++LL PL KQ S M N+QPKI EL Sbjct: 45 YIVFPLSWVITWFSDLFGGSYAVGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKIKEL 104 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 + K+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 105 QTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIK-T 163 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L + DP I PI+ +L+ F K+S + Sbjct: 164 DTFLWMQ-LGSPDPYF-------------------ILPIVAALTTFASSKISMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG----LIDR 569 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 570 LRSTFSKNYNS 580 L K + Sbjct: 264 LEEERLKKKAA 274 >gi|167629167|ref|YP_001679666.1| stage iii sporulation protein j/oxaa-like protein precursor [Heliobacterium modesticaldum Ice1] gi|167591907|gb|ABZ83655.1| stage iii sporulation protein j/oxaa-like protein precursor [Heliobacterium modesticaldum Ice1] Length = 222 Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats. Identities = 70/238 (29%), Positives = 119/238 (50%), Gaps = 28/238 (11%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 F + F + + ++G+AI+L T+ +K+L +PL+ KQ S M + P Sbjct: 3 QMLVDAFSSMINFFYIITQQIGIPSYGLAIILITIVIKMLLYPLSAKQMKSMKVMAELAP 62 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 K L+EK+ + PQ Q+AM+QLYK H +NPL+GC P+L+Q P+ A Y + + Sbjct: 63 KQKALQEKY-KKDPQKAQEAMMQLYKEHGVNPLSGCLPLLIQFPILIAFYNGLMAFPYLN 121 Query: 455 HAP-FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---- 509 A + W+ +L+A DP I P++ + + F+QMK++P Sbjct: 122 EAHATFLWVANLSAPDPY--------------------ILPLLATATTFLQMKVTPSSAG 161 Query: 510 --PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P A++ Q +++ MP++ + SF AGL +YW N + I+QQ + + Sbjct: 162 GNPQAEQTQKIMMYSMPLLIGWMAHSFAAGLSLYWVTFNTVGILQQLYMNRSLNVRKE 219 >gi|259047909|ref|ZP_05738310.1| stage III sporulation protein J [Granulicatella adiacens ATCC 49175] gi|259035443|gb|EEW36698.1| stage III sporulation protein J [Granulicatella adiacens ATCC 49175] Length = 270 Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats. Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 26/240 (10%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 ++ G++G+ I+ T+ +L+ PL QY ST +QP+I LREK+ Sbjct: 44 QFIIWLSDLFGGSYGLGIIFFTIITRLIMVPLMHFQYQSTRKQAILQPEIKALREKYSAR 103 Query: 407 P---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIK 463 ++LQ M LY+ IN AGC P+L+Q+PV A+Y+ IS + E+ + W + Sbjct: 104 DRATQEMLQAEMNALYEREGINQYAGCLPLLIQLPVMMALYQAISRT-EVLKTGHFLWFQ 162 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK--GQAMILN 521 L DP I P++ +++ FI +S D ++ Sbjct: 163 -LDQPDPYF-------------------ILPVLAAVTTFITTWLSMKMQDTGGAGKAMMY 202 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +MPV+ +F + L +YW NV + Q ++ + + + + Sbjct: 203 FMPVMILFMSLGLASALSLYWVVGNVFMVGQTLLLNNPFKFQEEQKAIIAEKKRRQKALE 262 >gi|302535577|ref|ZP_07287919.1| inner membrane protein [Streptomyces sp. C] gi|302444472|gb|EFL16288.1| inner membrane protein [Streptomyces sp. C] Length = 368 Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 +G++I+ + +++ PL KQ +T M+ +QPK+ ++E++K Q + M++ Sbjct: 36 WAWGLSIVSLVILIRICLIPLFVKQIKATRGMQALQPKMKAIQERYKNDK-QRQSEEMMK 94 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEM---------RHAPFWGWIK 463 LYK NPL+ C PIL Q P FFA+Y V++ ++ + R A +G Sbjct: 95 LYKETGTNPLSSCLPILAQSPFFFALYHVLASIANGKTIGVINQPLLESARQAHIFG--A 152 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---------PPADK 514 LAA + + + + + ++MSLS F + P + Sbjct: 153 PLAAKFMDSAEKVAALDASITNVRIVTAVMIVMMSLSQFYTQRQLMQKNVDLSVKTPFMQ 212 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q M++ PV+F +FP G+++YW +NV ++ QQ ++ + Sbjct: 213 QQKMLMYIFPVIFAVMGINFPVGVLVYWLTTNVWTMGQQMYVINQNPTP 261 >gi|291303914|ref|YP_003515192.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis DSM 44728] gi|290573134|gb|ADD46099.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis DSM 44728] Length = 366 Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 120/279 (43%), Gaps = 39/279 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + N + +AI+ V ++++ FPL KQ S M+ +QPK+ Sbjct: 19 HDLWDLILGADPVPGALNTSWQWILAIVFLVVTIRIVLFPLFVKQIKSQRAMQRLQPKMK 78 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 EL++++K + LQK M++LY+T NPL GC P+LLQ PVF A+ V+ +++ Sbjct: 79 ELQQRYKG-DRETLQKEMMELYRTEKANPLMGCLPMLLQAPVFIALLWVLRRIDPDKYSN 137 Query: 458 F----WGWIKDLAAADPTNIFTLFGILPF-----------------------YLPGFMHV 490 + + W + A D LFG + L + Sbjct: 138 YAKTLYTWTE--AQWDSAINAKLFGAPIWATFLTTQKDLKCSEHYDSCTTAATLNVQLVS 195 Query: 491 GIWPIIMSLSMFIQMK----MSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYW 542 GI +M ++ ++ + + AD Q MI M PV+ +F+ FP G+++YW Sbjct: 196 GILIALMIVTTYLTTRQMILKTGWNADPQQRMIQKLMLYGIPVMLLFSGGIFPIGVVLYW 255 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +N S+ QQ +++ + ++ S+ Sbjct: 256 VVNNAFSLGQQIWVLRKYP-PPKTDTSPKADIKAKPGSK 293 >gi|327334553|gb|EGE76264.1| membrane protein OxaA [Propionibacterium acnes HL097PA1] Length = 359 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 59/275 (21%), Positives = 121/275 (44%), Gaps = 23/275 (8%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 ++ + L + + + ++ +AI+ T Sbjct: 1 MLNPLVILSLGGALHTMGHAIMVPLYWAVSGLLVLFHYLWSPLFGRDSGISWTLAIVCLT 60 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 +F++LL PL KQ S +M+ IQPK+ ++EK+ + + M+ LY+ +NP A Sbjct: 61 IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYREEGVNPAA 119 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI-KDLAAADPTNIFTLFG--------- 478 C P+LLQ+P+F A+++V+ + R P + K+ + FG Sbjct: 120 SCLPVLLQMPIFLALFRVLDGA--SRGIPRGHFFAKNPGLMESLQHAKFFGAELAGRFLP 177 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFV 528 + + + + IIM ++F + + PP Q ++ + P++++ Sbjct: 178 MNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYL 237 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F+ SFP G+++YWS SN+ ++ QQ ++++ + Sbjct: 238 FSGVSFPIGVMLYWSTSNLWTLGQQEILIRNNPTP 272 >gi|154688209|ref|YP_001423370.1| OxaA-like protein precursor [Bacillus amyloliquefaciens FZB42] gi|154354060|gb|ABS76139.1| SpoIIIJ [Bacillus amyloliquefaciens FZB42] Length = 259 Score = 137 bits (344), Expect = 5e-30, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 27/246 (10%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + P + Y + ++ N+G++I++ T+ ++LL Sbjct: 16 VLLAGCSSVKEPITANSPHFWDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTILIRLLIL 75 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433 PL KQ S+ M+ +QP++ +LREK+ Q LQ+ + L+ H +NPLAGC+PI Sbjct: 76 PLMIKQLRSSKAMQALQPEMQKLREKYSSKDQKTQQKLQQETMALFSKHGVNPLAGCFPI 135 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+ Y I + + + W DL DP I Sbjct: 136 LIQMPILIGFYHAIMRTQAISQHS-FLWF-DLGEKDPYY-------------------IL 174 Query: 494 PIIMSLSMFIQMKMSP---PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 PI+ ++ F+Q K+ P + AM++ MP++ + +FP+ L +YW N+ I Sbjct: 175 PIVAGVATFVQQKLMMAGNPTQNPQMAMMVWIMPIMIIVFAINFPSALSLYWVVGNLFMI 234 Query: 551 VQQAVI 556 Q +I Sbjct: 235 AQTFLI 240 >gi|184202000|ref|YP_001856207.1| hypothetical protein KRH_23540 [Kocuria rhizophila DC2201] gi|183582230|dbj|BAG30701.1| OxaA family protein [Kocuria rhizophila DC2201] Length = 327 Score = 137 bits (344), Expect = 5e-30, Method: Composition-based stats. Identities = 60/255 (23%), Positives = 111/255 (43%), Gaps = 30/255 (11%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + +F L+ + + I+ T+ ++ L PL KQ S M+ +QP+ Sbjct: 15 VSAVLWAFHELFTLIGLDPTSGFTWVLCIVGLTLVMRTLTIPLFLKQIKSMRGMQELQPE 74 Query: 396 IDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + +L+ K+K Q+ ++ + LYK H NP A C PI++Q+P+FFA+++V+ Sbjct: 75 LAKLQAKYKGKKDQLSRQAMAEEQMALYKEHGSNPFAACLPIIVQMPIFFALFQVLRSVP 134 Query: 452 EMRHAPFWGWIKDLAAADPTNIFT---LFGILPFYL----------PGFMHVGIWPIIMS 498 A L + F +FG F + + + MS Sbjct: 135 ---QAAANNEAIHLLTPQMVHEFNESTIFGAPLFSTLMQPGTGNHAATVVLALVMIVAMS 191 Query: 499 LSMFIQMKM----SPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 + FI K + P + Q M+L P++F +FP G+++YW+ SN+ Sbjct: 192 ATQFITQKQLTSRNMSDSAKESPMYRQQQMMLYLFPLIFAIGGINFPLGVLVYWTVSNLW 251 Query: 549 SIVQQAVIMKMHGAE 563 S+ QQ +++ + + Sbjct: 252 SMGQQWWVIRNNPTK 266 >gi|255025588|ref|ZP_05297574.1| SpoIIIJ protein [Listeria monocytogenes FSL J2-003] Length = 283 Score = 137 bits (344), Expect = 5e-30, Method: Composition-based stats. Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 27/232 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + + + + G++ + I++ T+ ++LL PL KQ S M N+QPKI EL Sbjct: 45 YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 104 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L DP I P++ +L+ F+ K+S + Sbjct: 165 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 255 >gi|315286678|ref|ZP_07872171.1| stage III sporulation protein J [Listeria ivanovii FSL F6-596] gi|313630899|gb|EFR98590.1| stage III sporulation protein J [Listeria ivanovii FSL F6-596] Length = 287 Score = 137 bits (344), Expect = 5e-30, Method: Composition-based stats. Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 27/232 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + +++ + G++ + I++ T+ ++LL PL KQ S M N+QPKI EL Sbjct: 45 YIVFPLSWVITWFSDLFGGSYAVGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKIKEL 104 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 + K+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 105 QTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L + DP I PI+ +L+ F K+S + Sbjct: 165 S-FLWMQ-LGSPDPYF-------------------ILPIVAALTTFASSKISMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 255 >gi|163943166|ref|YP_001648050.1| OxaA-like protein precursor [Bacillus weihenstephanensis KBAB4] gi|229136311|ref|ZP_04265058.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST196] gi|229170189|ref|ZP_04297875.1| Membrane protein oxaA 1 [Bacillus cereus AH621] gi|163865363|gb|ABY46422.1| 60 kDa inner membrane insertion protein [Bacillus weihenstephanensis KBAB4] gi|228613290|gb|EEK70429.1| Membrane protein oxaA 1 [Bacillus cereus AH621] gi|228647183|gb|EEL03271.1| Membrane protein oxaA 1 [Bacillus cereus BDRD-ST196] Length = 255 Score = 137 bits (344), Expect = 5e-30, Method: Composition-based stats. Identities = 72/258 (27%), Positives = 118/258 (45%), Gaps = 27/258 (10%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 L A I + P YF+ ++ + N+G+AI Sbjct: 4 KIGLLAMVIMLMAIATGCSETNQPITPKSTGIWNEYFVYPLSQLITYFAELFGSNYGLAI 63 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421 ++TT+ ++ PL KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ Sbjct: 64 VVTTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + +NPLAGC PI +Q+P+ FA Y I + + + W DL ADP Sbjct: 124 NGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI-SEHTFLWF-DLGQADPFY--------- 172 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538 I PI+ +++ FIQ K++ + AM++ MP++ + +FPA L Sbjct: 173 ----------ILPIVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAAL 222 Query: 539 IIYWSWSNVISIVQQAVI 556 +YW N+ I Q +I Sbjct: 223 SLYWVVGNIFGIAQMYMI 240 >gi|303286693|ref|XP_003062636.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] gi|226456153|gb|EEH53455.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] Length = 483 Score = 137 bits (344), Expect = 5e-30, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 24/269 (8%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFY---NLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 IP + G + ++ N+ ++G AI++ TV VKL+ FPL KKQ Sbjct: 105 IPGLQKGGWLGPITDFLEASLGVIDQGLEGLNVPYSYGYAILVLTVVVKLVTFPLTKKQV 164 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + M+ +QP++ EL+ + P+ LQ +LYK N NPLAGC P +PVF + Sbjct: 165 EGSIAMQALQPRVKELQAMYAN-DPERLQMETARLYKEANFNPLAGCLPTFATLPVFIGL 223 Query: 444 YKVISIS-LEMRHAPFWGWIKDLAAA-------DPTNIFTLF----GILPFYLPGFMHVG 491 Y+ +S + E + WI L D + L+ G P Sbjct: 224 YRALSNAATEGMLEDGFYWIPSLGGPTSIAARNDGSGFSWLWPFVDGAPPLGWHDTAAYL 283 Query: 492 IWPIIMSLSMFIQMK-MSPPPA---DKGQ---AMILNWMPVVFVFALSSFPAGLIIYWSW 544 P+++ +S F K M+P D Q IL ++P + F + PAGL +YW Sbjct: 284 ALPVLLVVSQFASQKIMTPDQGKDVDPSQASSQAILKFLPFMIGFFSLNVPAGLTLYWFA 343 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +N+ S Q + + I + Sbjct: 344 NNIFSTAQTVYL-RKTTKAPDSIQNVGGG 371 >gi|108805992|ref|YP_645929.1| protein translocase subunit yidC [Rubrobacter xylanophilus DSM 9941] gi|108767235|gb|ABG06117.1| protein translocase subunit yidC [Rubrobacter xylanophilus DSM 9941] Length = 278 Score = 137 bits (344), Expect = 5e-30, Method: Composition-based stats. Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 39/220 (17%) Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 Y+L + ++I L TV V+ L FPL KQ S ++ ++P+I ++ +++ +P Q+ + Sbjct: 32 YDLGVEWWLSIALLTVVVRALLFPLTLKQMKSMRALQELRPEIQRIQRQYRDNP-QLRNQ 90 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI----------------SLEMRHAP 457 M++LY+ N+NPL GC P+L+Q+P+F I+ VI + E Sbjct: 91 EMMKLYQERNVNPLGGCLPLLVQMPIFIGIFYVIREFGGYSYGGRVVEPSEPTFE---TG 147 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 W +DL+ ADP I P++ +L+M ++S + Q Sbjct: 148 GILWFQDLSQADPYY-------------------ILPVLSALTMLAGTEISAKYMEPQQR 188 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 I+ +P L +FPAGL +YW +N+++I Q I Sbjct: 189 WIMRIVPFAITLFLWNFPAGLFVYWISNNLVTIAQNYFIY 228 >gi|310659886|ref|YP_003937607.1| sec-independent factor for membrane protein insertion [Clostridium sticklandii DSM 519] gi|308826664|emb|CBH22702.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Clostridium sticklandii] Length = 228 Score = 137 bits (344), Expect = 5e-30, Method: Composition-based stats. Identities = 75/238 (31%), Positives = 127/238 (53%), Gaps = 24/238 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 ++ L+ YN++G++ I+I++ TV VKLL PL Q S +M+ IQPK+DE Sbjct: 1 MSQLSYLFGSLLELIYNVIGDYAISIIVFTVVVKLLLLPLTLTQTKSMKSMQLIQPKMDE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL------E 452 +++K++ P + + +++LYK H +NPLAGC P+L+Q P+ ++ + + E Sbjct: 61 IKKKYQNDPDK-QNQKIMELYKEHKVNPLAGCLPLLIQFPIIIGLFNALREPVKYVFGTE 119 Query: 453 MRHA---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + W+ +LA+ D I +PF I PI+ +++ +IQ M Sbjct: 120 AAYKIADTGFLWVNNLASPDV--ILLGGISIPF---------ILPILAAITTYIQSAMMS 168 Query: 510 PPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P D Q M+L P++ +F SFPAGL++YW N+ IVQQ ++ K A+ Sbjct: 169 PKGGKKDPTQTMMLYMFPIMMLFWGISFPAGLLLYWVAGNIFQIVQQYILSKPSKAKE 226 >gi|308175811|ref|YP_003922516.1| Inner membrane protein oxaA [Bacillus amyloliquefaciens DSM 7] gi|307608675|emb|CBI45046.1| Inner membrane protein oxaA [Bacillus amyloliquefaciens DSM 7] Length = 259 Score = 137 bits (344), Expect = 5e-30, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 27/246 (10%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + P + Y + ++ N+G++I++ T+ ++LL Sbjct: 16 VLLAGCSSVKEPITANSPHFWDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTILIRLLIL 75 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433 PL KQ S+ M+ +QP++ +LREK+ Q LQ+ + L+ H +NPLAGC+PI Sbjct: 76 PLMIKQLRSSKAMQALQPEMQKLREKYSSKDQKTQQKLQQETMALFSKHGVNPLAGCFPI 135 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+ Y I + + + W DL DP I Sbjct: 136 LIQMPILIGFYHAIMRTQAISQHS-FLWF-DLGEKDPYY-------------------IL 174 Query: 494 PIIMSLSMFIQMKMSP---PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 PI+ ++ F+Q K+ P + AM++ MP++ + +FP+ L +YW N+ I Sbjct: 175 PIVAGVATFVQQKLMMAGNPSQNPQMAMMVWIMPIMIIVFAINFPSALSLYWVVGNLFMI 234 Query: 551 VQQAVI 556 Q +I Sbjct: 235 AQTFLI 240 >gi|308179187|ref|YP_003918593.1| preprotein translocase subunit YidC [Arthrobacter arilaitensis Re117] gi|307746650|emb|CBT77622.1| putative preprotein translocase subunit YidC [Arthrobacter arilaitensis Re117] Length = 324 Score = 137 bits (344), Expect = 6e-30, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 30/256 (11%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W + +F + + + ++I+ + ++ L P+ KQ S M+ +QP Sbjct: 16 VSWVLWAFHELFTTIGMNADSGVTWTLSIIFLVLLIRTLLIPVFVKQIKSQRAMQALQPD 75 Query: 396 IDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + +L+ K+K Q+ + + L+K H NPL+ C P+L+Q+P FFA+++V++ + Sbjct: 76 LRKLQAKYKGKTDQMSRQAMVQEQQALFKKHKTNPLSSCLPLLVQMPFFFALFRVLNEA- 134 Query: 452 EMRHAPFWGWIKDLAA-----ADPTNIFTLFGILPF---------YLPGFMHVGIWPIIM 497 R + I L+A D ++I F + + + M Sbjct: 135 -SRASDDGRSIGALSAEHIRSFDQSSILGAPLSETFLGTINSGAVNWAVIIVAVVMILAM 193 Query: 498 SLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + S F + P + Q M+L +P+VF +FP G++IYW+ SN+ Sbjct: 194 TASQFFTQRQLMTKNMSAEALQGPFMQQQKMMLYILPLVFGIGGINFPIGVLIYWTASNL 253 Query: 548 ISIVQQAVIMKMHGAE 563 ++ QQ +++ + Sbjct: 254 WTLGQQFWVIRNNPTP 269 >gi|229014652|ref|ZP_04171766.1| Membrane protein oxaA 1 [Bacillus mycoides DSM 2048] gi|228746663|gb|EEL96552.1| Membrane protein oxaA 1 [Bacillus mycoides DSM 2048] Length = 255 Score = 137 bits (344), Expect = 6e-30, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 27/258 (10%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 L A I + P YF+ ++ + N+G+AI Sbjct: 4 KIGLLAMVIMLMAIATGCSETNQPITPKSTGIWNEYFVYPLSQLITYFAELFGSNYGLAI 63 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421 ++TT+ ++ PL KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ Sbjct: 64 VVTTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQK 123 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + +NPLAGC PI +Q+P+ FA Y I + + + W DL ADP Sbjct: 124 NGVNPLAGCLPIFVQMPILFAFYHAIMRTTAI-SEHTFLWF-DLGQADPFY--------- 172 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGL 538 I P++ +++ FIQ K++ + AM++ MP++ + +FPA L Sbjct: 173 ----------ILPVVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAAL 222 Query: 539 IIYWSWSNVISIVQQAVI 556 +YW N+ I Q +I Sbjct: 223 SLYWVVGNIFGIAQMYMI 240 >gi|313635501|gb|EFS01736.1| stage III sporulation protein J [Listeria seeligeri FSL N1-067] Length = 287 Score = 137 bits (343), Expect = 6e-30, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 31/251 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + +++ + G++ I I++ T+ ++LL PL KQ S M N+QPKI EL Sbjct: 45 YIVFPLSWVITWFSDLFGGSYAIGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKIKEL 104 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 + K+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 105 QTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIK-T 163 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L + DP I PI+ +L+ F K+S + Sbjct: 164 DTFLWMQ-LGSPDPYF-------------------ILPIVAALTTFASSKISMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG----LIDR 569 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQ 263 Query: 570 LRSTFSKNYNS 580 L K + Sbjct: 264 LEEERLKKKAA 274 >gi|84497198|ref|ZP_00996020.1| putative inner membrane protein translocase component YidC [Janibacter sp. HTCC2649] gi|84382086|gb|EAP97968.1| putative inner membrane protein translocase component YidC [Janibacter sp. HTCC2649] Length = 335 Score = 137 bits (343), Expect = 6e-30, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 116/273 (42%), Gaps = 27/273 (9%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+L+ W + F ++ + + ++I+ + ++ PL KQ ++ M+ Sbjct: 13 ELLVAWIMYGFHQAFTWIGLDPAS--GAAWALSIIGLVLVMRAAMIPLFVKQINASRKMQ 70 Query: 391 NIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 IQP++ ++++K+K Q + + + LYK+ NP + C PIL+Q P FF +++V Sbjct: 71 MIQPELQKIQKKYKGKSDPESRQAMTQETMALYKSEGTNPFSSCLPILVQSPFFFGLFRV 130 Query: 447 ISIS--LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIM 497 ++ + G I A TLFG + + ++M Sbjct: 131 LNGLKGISEGTKDPIGPITRTVAK-QAESATLFGAQLSDKFIGAETTTTKVVTILLIVLM 189 Query: 498 SLSMFIQMKMSPPPADK----------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 S + F + Q +I+ MPVVF + +FP G+++YW +NV Sbjct: 190 SATTFTTQRQLMTKNMPASALDNPFAKQQKLIMYVMPVVFAVSGINFPIGVLLYWFTTNV 249 Query: 548 ISIVQQAVIMKMHGAEIGLIDR-LRSTFSKNYN 579 S+ QQ +++ A +R L +K Sbjct: 250 WSMTQQFYVIRKMPAPGSAAERALHERLAKRGK 282 >gi|328555787|gb|AEB26279.1| OxaA-like protein precursor [Bacillus amyloliquefaciens TA208] gi|328914176|gb|AEB65772.1| Inner membrane protein oxaA [Bacillus amyloliquefaciens LL3] Length = 249 Score = 137 bits (343), Expect = 7e-30, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 27/246 (10%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + P + Y + ++ N+G++I++ T+ ++LL Sbjct: 6 VLLAGCSSVKEPITANSPHFWDKYVVYPLSEVITYVAKLTGDNYGLSIIIVTILIRLLIL 65 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433 PL KQ S+ M+ +QP++ +LREK+ Q LQ+ + L+ H +NPLAGC+PI Sbjct: 66 PLMIKQLRSSKAMQALQPEMQKLREKYSSKDQKTQQKLQQETMALFSKHGVNPLAGCFPI 125 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+ Y I + + + W DL DP I Sbjct: 126 LIQMPILIGFYHAIMRTQAISQHS-FLWF-DLGEKDPYY-------------------IL 164 Query: 494 PIIMSLSMFIQMKMSP---PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 PI+ ++ F+Q K+ P + AM++ MP++ + +FP+ L +YW N+ I Sbjct: 165 PIVAGVATFVQQKLMMAGNPSQNPQMAMMVWIMPIMIIVFAINFPSALSLYWVVGNLFMI 224 Query: 551 VQQAVI 556 Q +I Sbjct: 225 AQTFLI 230 >gi|150392475|ref|YP_001322524.1| 60 kDa inner membrane insertion protein [Alkaliphilus metalliredigens QYMF] gi|149952337|gb|ABR50865.1| 60 kDa inner membrane insertion protein [Alkaliphilus metalliredigens QYMF] Length = 220 Score = 137 bits (343), Expect = 7e-30, Method: Composition-based stats. Identities = 67/235 (28%), Positives = 120/235 (51%), Gaps = 32/235 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F A+P+ L+ ++L+GN+G++I++ T+ VKLL PL KQ S M+ +QP+I + Sbjct: 1 MRFFAQPLGALLKLIFDLIGNYGVSIIVFTILVKLLLLPLTLKQTRSMRQMQEVQPEIKK 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------SISL 451 L+EK+K Q+ K +++Y +N++P GC P+L+Q P+ ++ + S Sbjct: 61 LQEKYKNDKEQLNAK-TMEIYAKYNVSPFGGCLPLLVQFPILIGLFTALRDPATYVFGSA 119 Query: 452 EMRHA--PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 E+ + + W+ +L+ ADP + P++ ++ F+ K Sbjct: 120 EIYASINTSFLWLSNLSDADPW--------------------VLPLLAGITTFLSSKTMS 159 Query: 510 P--PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 AD+ Q M+ MP++ + SFPAGL +YW SN+ VQQ ++ + Sbjct: 160 TGKQADQTQKMMTYGMPLMIFWWGRSFPAGLTLYWVVSNLFQFVQQLLMNRSQDK 214 >gi|328950558|ref|YP_004367893.1| membrane protein insertase, YidC/Oxa1 family [Marinithermus hydrothermalis DSM 14884] gi|328450882|gb|AEB11783.1| membrane protein insertase, YidC/Oxa1 family [Marinithermus hydrothermalis DSM 14884] Length = 449 Score = 137 bits (343), Expect = 7e-30, Method: Composition-based stats. Identities = 66/240 (27%), Positives = 121/240 (50%), Gaps = 26/240 (10%) Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 L + ++ + +M Y GN+G+AI++ T+FV+LL +PL +Q+ S Sbjct: 231 GYYDLPGLFQANIWGTLSLGLIYIMETAYRFTGNWGLAILVLTLFVRLLLWPLMHQQFKS 290 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A + ++P +DE+ +K+K P + +A++++Y+ H +NP +GC P+ +Q+P+ F +++ Sbjct: 291 MAELNRLKPLMDEINKKYKNDPEKR-TEALMKMYQEHKVNPASGCLPLFIQLPILFILWR 349 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 VI+ E + W+ DLA DP I PI+ M +Q Sbjct: 350 VIAN-FEFGQ--GFLWLPDLALPDPYY-------------------ILPILYVGVMIVQT 387 Query: 506 KMSP-PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + D + I +M + FV+ + FP+G+ +YW +S +I + QQ +I K G Sbjct: 388 LLMAHGNKDIIRQSI--FMNLFFVYLVLQFPSGVTLYWVFSTLIGLGQQLLINKQLGITP 445 >gi|295394850|ref|ZP_06805063.1| membrane protein OxaA [Brevibacterium mcbrellneri ATCC 49030] gi|294972183|gb|EFG48045.1| membrane protein OxaA [Brevibacterium mcbrellneri ATCC 49030] Length = 319 Score = 137 bits (343), Expect = 7e-30, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 109/248 (43%), Gaps = 23/248 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W F + + AI T+ V+ + PL Q + M+ +QP++ Sbjct: 17 WILAFFHMAFTALGMSPTAGWTWVAAIAGLTIVVRAVLIPLFVYQIKAQRKMQLLQPEMM 76 Query: 398 ELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+K Q ++ L+K H NP A C P+L+Q+P+FF++++VI + E Sbjct: 77 ELQKKYKGKRDQFSRQQMAEEQQALFKKHGTNPFASCLPLLVQMPIFFSLFRVIRNT-EG 135 Query: 454 RHAPFWGWIKDLAA--ADPTNIFTLFGI------LPFYLPGFMHVGIWPIIMSLSMFIQM 505 I L A ++FG+ L L + I +IM ++ FI Sbjct: 136 IGNGDIPPIGGLTQELASQATHASIFGVELSDTFLQGDLGTKVLTAILIVIMGVTQFITQ 195 Query: 506 KMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + P + Q M+L MP++F FP GLI+YW SNV ++VQQ + Sbjct: 196 RQIMAKNMSEAAMNNPFMQQQKMLLYMMPIIFAVGGIYFPLGLIVYWLVSNVWTMVQQFI 255 Query: 556 IMKMHGAE 563 +++ Sbjct: 256 VIRNMPTP 263 >gi|254991919|ref|ZP_05274109.1| SpoIIIJ protein [Listeria monocytogenes FSL J2-064] Length = 287 Score = 137 bits (343), Expect = 7e-30, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 119/235 (50%), Gaps = 28/235 (11%) Query: 338 WFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ ++ +F G++ + I++ T+ ++LL PL KQ S M N+QPKI Sbjct: 42 WSHYIVYPLSAVIKWFSELFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKI 101 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + + Sbjct: 102 KELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAAI 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---P 510 + + W++ L DP I P++ +L+ F+ K+S Sbjct: 162 KG-DTFLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQT 200 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + Sbjct: 201 QQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 255 >gi|289427470|ref|ZP_06429183.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes J165] gi|289159400|gb|EFD07591.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes J165] gi|313806852|gb|EFS45350.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL087PA2] gi|313817639|gb|EFS55353.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL046PA2] gi|313821536|gb|EFS59250.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL036PA1] gi|313824520|gb|EFS62234.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL036PA2] gi|313826189|gb|EFS63903.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL063PA1] gi|314926337|gb|EFS90168.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL036PA3] gi|314961659|gb|EFT05760.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL002PA2] gi|314980261|gb|EFT24355.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL072PA2] gi|314987116|gb|EFT31208.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL005PA2] gi|314990682|gb|EFT34773.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL005PA3] gi|315083075|gb|EFT55051.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL027PA2] gi|315086609|gb|EFT58585.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL002PA3] gi|315088011|gb|EFT59987.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL072PA1] gi|327333669|gb|EGE75386.1| membrane protein OxaA [Propionibacterium acnes HL096PA3] gi|327444473|gb|EGE91127.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL013PA2] gi|328757980|gb|EGF71596.1| membrane protein insertase, YidC/Oxa1 family [Propionibacterium acnes HL020PA1] gi|332676743|gb|AEE73559.1| membrane protein OxaA [Propionibacterium acnes 266] Length = 359 Score = 136 bits (342), Expect = 8e-30, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 119/275 (43%), Gaps = 23/275 (8%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 ++ + L + + + ++ +AI+ T Sbjct: 1 MLNPLVILSLGGALHTMGHAIMVPLYWAVSGLLVLFHYLWSPLFGRDSGISWTLAIVCLT 60 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 +F++LL PL KQ S +M+ IQPK+ ++EK+ + + M+ LY+ +NP A Sbjct: 61 IFIRLLLVPLFVKQINSARSMQLIQPKMKAIQEKYGD-DRERAGQEMMNLYREEGVNPAA 119 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI-KDLAAADPTNIFTLFG--------- 478 C P+LLQ+P+F A+++V+ R P + K+ + FG Sbjct: 120 SCLPVLLQMPIFLALFRVLDGV--SRGIPRGHFFAKNPGLMESLQHAKFFGAELAGRFLP 177 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFV 528 + + + + IIM ++F + + PP Q ++ + P++++ Sbjct: 178 MNNGFGGTQVVALVLIIIMVATLFYTQLQLMRKNMPPESLTGPMAQQQKMMIYLFPLMYL 237 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 F+ SFP G+++YW SN+ ++ QQ ++++ + Sbjct: 238 FSGVSFPIGVMLYWCTSNLWTLGQQEILIRNNPTP 272 >gi|283458991|ref|YP_003363641.1| preprotein translocase subunit YidC [Rothia mucilaginosa DY-18] gi|283135056|dbj|BAI65821.1| preprotein translocase subunit YidC [Rothia mucilaginosa DY-18] Length = 329 Score = 136 bits (342), Expect = 8e-30, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 104/252 (41%), Gaps = 24/252 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 ++ +F + + + I+ T+ ++ L PL KQ + M +Q Sbjct: 15 VSVVLWLFHTLFTSLGMDPASGLTWVLCIIFLTLVMRTLTIPLFVKQIKAMRGMTAMQGD 74 Query: 396 IDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + +L+EK+K Q + + +++Y+ H NP A C PIL Q+P+FF +Y+V+ Sbjct: 75 MAKLQEKYKGKKDQLSRQAMAQEQMEMYRKHGTNPFASCLPILAQMPIFFGLYQVLMSVP 134 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL----------PGFMHVGIWPIIMSLSM 501 + N +FG F + I ++MS + Sbjct: 135 TAAQNNQGVLMLPAELVHQFNDSQIFGAQLFATMMHPGAGDATATVVQAVIMIVLMSATQ 194 Query: 502 FIQMKM----SPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 F K + P + Q MI+ P++F + +FP G++ YW+ SN+ S+ Sbjct: 195 FYIQKQLSVKNMSEAALNSPMFRQQQMIMYIFPIIFAVSGINFPLGVLYYWTVSNLWSLG 254 Query: 552 QQAVIMKMHGAE 563 QQ +++ + Sbjct: 255 QQWWVIRNNPTP 266 >gi|288554603|ref|YP_003426538.1| OxaA-like protein precursor [Bacillus pseudofirmus OF4] gi|288545763|gb|ADC49646.1| OxaA-like protein precursor SpoIIIJ [Bacillus pseudofirmus OF4] Length = 255 Score = 136 bits (342), Expect = 8e-30, Method: Composition-based stats. Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 25/242 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W + P+ L+ YF + ++G++I++ T+ ++LL PL KQ S M+ IQP++ Sbjct: 36 WNSYFVYPLSWLIIYFGEALNSYGLSIIVVTILLRLLILPLMIKQTKSAKAMQAIQPEMQ 95 Query: 398 ELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +LREK+ Q Q LQ+ M+ +++ +NPLAGC P+ +Q+P+ A Y I + + Sbjct: 96 KLREKYSAKDQKTQQKLQQEMMAMFQERGVNPLAGCLPLFVQMPILLAFYHAIMRTDVIG 155 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + + W + L A DP + PI+ ++ FIQ KM + Sbjct: 156 NYS-FLWFE-LGAPDPF--------------------VLPIVAGITTFIQQKMMMVTDNP 193 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++L MPV+ FPA L +YW N++ I Q I + + + Sbjct: 194 QMKILLYVMPVMIFVFAMFFPAALTLYWVVGNLVMITQTYFITGPNVGKDKTAEAAAGGK 253 Query: 575 SK 576 K Sbjct: 254 KK 255 >gi|221321325|ref|ZP_03602619.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. JH642] Length = 259 Score = 136 bits (342), Expect = 8e-30, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 27/246 (10%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + P + Y + ++ N+G++I+L T+ ++LL Sbjct: 16 MLLAGCSSVKEPITADSPHFWDKYVVYPLSELITYVAKLTGDNYGLSIILVTILIRLLIL 75 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPI 433 PL KQ S+ M+ +QP++ +L+EK+ Q LQ+ + L++ H +NPLAGC+PI Sbjct: 76 PLMIKQLRSSKAMQALQPEMQKLKEKYSSKDQKTQQKLQQETMALFQKHGVNPLAGCFPI 135 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+++P+ Y I + + + W DL DP I Sbjct: 136 LIKMPILIGFYHAIMRTQAI-SEHSFLWF-DLGEKDPYY-------------------IL 174 Query: 494 PIIMSLSMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 PI+ ++ F+Q K+ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 175 PIVAGVATFVQQKLMMAGNAQQNPQMAMMLWIMPIMIIVFAINFPAALSLYWVVGNLFMI 234 Query: 551 VQQAVI 556 Q +I Sbjct: 235 AQTFLI 240 >gi|260887480|ref|ZP_05898743.1| stage III sporulation protein J [Selenomonas sputigena ATCC 35185] gi|330840118|ref|YP_004414698.1| membrane protein insertase, YidC/Oxa1 family [Selenomonas sputigena ATCC 35185] gi|260862767|gb|EEX77267.1| stage III sporulation protein J [Selenomonas sputigena ATCC 35185] gi|329747882|gb|AEC01239.1| membrane protein insertase, YidC/Oxa1 family [Selenomonas sputigena ATCC 35185] Length = 222 Score = 136 bits (342), Expect = 9e-30, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 21/206 (10%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 N+GIAI+L T+ +K+ +PL KQ S M+ +QPK+ +L+EK+K +P Q++Q+ + Sbjct: 31 FENYGIAIILLTILIKVCLYPLTVKQVRSMKGMQELQPKMKKLQEKYKDNP-QMMQQKIG 89 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK +NPLAGC P+L+Q+P+ ++ + P + W+ L+ DP Sbjct: 90 ELYKEAGVNPLAGCLPLLIQMPILMGMFYALQG-YAYSGTPSFLWLASLSEPDPHY---- 144 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 I P++ +LS + K + ++ +++ MP+ + +F + Sbjct: 145 ---------------ILPVLSALSTWFVQKQTSTETNQQMKIMMIVMPIFIGWISLNFAS 189 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGA 562 GL++YW N++ IVQQ + + Sbjct: 190 GLVLYWVTMNLVQIVQQWWMYRNEDV 215 >gi|260101881|ref|ZP_05752118.1| stage III sporulation protein J [Lactobacillus helveticus DSM 20075] gi|260084309|gb|EEW68429.1| stage III sporulation protein J [Lactobacillus helveticus DSM 20075] gi|328463993|gb|EGF35491.1| stage III sporulation protein [Lactobacillus helveticus MTCC 5463] Length = 298 Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 111/264 (42%), Gaps = 21/264 (7%) Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 P +W + + ++ + ++G AI++ T+ ++++ PL Sbjct: 39 QSANGHVAPVLHNSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIIRVILLPLN 98 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQ 436 ST M+ IQP+I+ELR+K+ + Q+ +LYK +NP GC P+L+Q Sbjct: 99 AISIRSTTKMQGIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQ 158 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 +PV +A+Y I + ++ + W+ DL+ DP I + + + Sbjct: 159 LPVMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAM---------------VF 201 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 LS +I +P A G ++ + M ++ +F + + +YW SN+ VQ + Sbjct: 202 TFLSTYISQLATPKSAQNGMTKVMTYGMAIIVGVMALNFQSAITLYWVISNLFQAVQTFI 261 Query: 556 IMKMHGAEIGLIDRLRSTFSKNYN 579 + + + + + Sbjct: 262 LQNPIKFKKEQEAKAEAERERKRK 285 >gi|317126737|ref|YP_004100849.1| membrane protein insertase, YidC/Oxa1 family [Intrasporangium calvum DSM 43043] gi|315590825|gb|ADU50122.1| membrane protein insertase, YidC/Oxa1 family [Intrasporangium calvum DSM 43043] Length = 373 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 115/273 (42%), Gaps = 26/273 (9%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 I G + + ++ + ++I+ TV V++L PL +Q S+ M+ Sbjct: 10 YPIKLGEAWVMYAWHWLFDLIGLPTGWAWALSIVGLTVVVRVLLIPLFVRQIHSSRKMQL 69 Query: 392 IQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 IQP++ ++++K+K + Q ++ LY+ NP + C PILLQ P FFA+++++ Sbjct: 70 IQPEMQKIQKKYKGKRDPESQKAQQAEIMDLYRRTGTNPFSSCLPILLQSPFFFALFQLL 129 Query: 448 SISLEMR------HAPFWGWIKD---LAAADP---TNIFTLFGILPFYLPGFMHVGIWPI 495 + + G I L+ D + + + + + Sbjct: 130 NNLKSIAEGNIKGGGSPVGPITKAVALSIEDSRIFGSRLSDAFLTSPGTSTKILAAVLIA 189 Query: 496 IMSLSMFIQM----KMSPPP-----ADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWS 545 MS++ F + + P Q +L + MP+ F + +FP G++IYW+ + Sbjct: 190 AMSVTTFTTQHQLMRKNMPASALDNPFAKQQKVLLYLMPIFFAISGVNFPVGVLIYWTTT 249 Query: 546 NVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 N+ ++ QQ +++ A L + + Sbjct: 250 NLWTMGQQFYVIRNMPAPGSLAYQAMEERDRRK 282 >gi|323703944|ref|ZP_08115574.1| membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum nigrificans DSM 574] gi|323531102|gb|EGB21011.1| membrane protein insertase, YidC/Oxa1 family [Desulfotomaculum nigrificans DSM 574] Length = 229 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 123/229 (53%), Gaps = 26/229 (11%) Query: 336 WGWFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +GWF +I M LM+ Y V ++ +AI++ TV +K+ +PL+KKQ S M+ Sbjct: 2 FGWFDYIKTGMTDLMNLLYGFTVQIGVPSYALAIIILTVIIKMALYPLSKKQMRSMVMMQ 61 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P+I ++++K+K PQ +Q+ +++LYK +N+NP+AGC P+L+Q+P+ A+Y+ + Sbjct: 62 KLAPEIKQIQDKYKGKDPQKMQQMIMELYKENNVNPMAGCLPLLIQMPILIALYRALYAF 121 Query: 451 LEMRHAP-FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 A + W++ L+ G +P I+ + + ++Q +++ Sbjct: 122 PFKNPAHAHFLWVESLSK---------TGDIP-----------LAILAAATTYLQSRLTT 161 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D+ Q +L MP+ + + PAGL +YW N++ +QQ I K Sbjct: 162 NTQDQTQRTMLYMMPLFIGWIAYTVPAGLALYWVVFNIVGTIQQWFINK 210 >gi|161508219|ref|YP_001578190.1| stage III sporulation protein [Lactobacillus helveticus DPC 4571] gi|160349208|gb|ABX27882.1| Stage III sporulation protein [Lactobacillus helveticus DPC 4571] Length = 291 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 111/264 (42%), Gaps = 21/264 (7%) Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 P +W + + ++ + ++G AI++ T+ ++++ PL Sbjct: 32 QSANGHVAPVLHNSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIIRVILLPLN 91 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQ 436 ST M+ IQP+I+ELR+K+ + Q+ +LYK +NP GC P+L+Q Sbjct: 92 AISIRSTTKMQGIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQ 151 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 +PV +A+Y I + ++ + W+ DL+ DP I + + + Sbjct: 152 LPVMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAM---------------VF 194 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 LS +I +P A G ++ + M ++ +F + + +YW SN+ VQ + Sbjct: 195 TFLSTYISQLATPKSAQNGMTKVMTYGMAIMVGVMALNFQSAITLYWVISNLFQAVQTFI 254 Query: 556 IMKMHGAEIGLIDRLRSTFSKNYN 579 + + + + + Sbjct: 255 LQNPIKFKKEQEAKAEAERERKRK 278 >gi|229065145|ref|ZP_04200438.1| Membrane protein oxaA 1 [Bacillus cereus AH603] gi|228716174|gb|EEL67893.1| Membrane protein oxaA 1 [Bacillus cereus AH603] Length = 246 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I + P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 8 IATGCSETNQPITPKSTGIWNEYFVYPLSQLITYFAELFGSNYGLAIVVTTLIIRFALLP 67 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 68 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIF 127 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + + + W DL ADP I P Sbjct: 128 VQMPILFAFYHAIMRTTAI-SEHTFLWF-DLGQADPFY-------------------ILP 166 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 I+ +++ FIQ K++ + AM++ MP++ + +FPA L +YW N+ I Sbjct: 167 IVAAITTFIQQKLAMAGTAGQNPQMAMMIWLMPIMILVFAINFPAALSLYWVVGNIFGIA 226 Query: 552 QQAVI 556 Q +I Sbjct: 227 QMYMI 231 >gi|315273159|ref|ZP_07869206.1| stage III sporulation protein J [Listeria marthii FSL S4-120] gi|313616210|gb|EFR89288.1| stage III sporulation protein J [Listeria marthii FSL S4-120] Length = 287 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 27/230 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + + + + G++ + I++ T+ ++LL PL KQ S M N+QPKI EL Sbjct: 45 YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 104 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L DP I P++ +L+ F+ K+S + Sbjct: 165 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K AMI+ MPV+ +F + P+ L +YW NV ++ Q +I + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNVFTVFQTLLINNPFKNK 253 >gi|217965938|ref|YP_002351616.1| membrane protein OxaA 1 [Listeria monocytogenes HCC23] gi|290892034|ref|ZP_06555031.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|217335208|gb|ACK41002.1| membrane protein OxaA 1 [Listeria monocytogenes HCC23] gi|290558628|gb|EFD92145.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|307572445|emb|CAR85624.1| membrane protein oxaA 1 precursor [Listeria monocytogenes L99] Length = 287 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 63/230 (27%), Positives = 115/230 (50%), Gaps = 27/230 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + + + + G++ + I++ T+ ++LL PL KQ S M N+QPKI EL Sbjct: 45 YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 104 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L DP I P++ +L+ F+ K+S + Sbjct: 165 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNK 253 >gi|302390793|ref|YP_003826614.1| membrane protein insertase, YidC/Oxa1 family [Thermosediminibacter oceani DSM 16646] gi|302201421|gb|ADL08991.1| membrane protein insertase, YidC/Oxa1 family [Thermosediminibacter oceani DSM 16646] Length = 209 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 111/225 (49%), Gaps = 24/225 (10%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + ++ + + ++G+AI++ T +KL+ P + +Q+ S M+ I P +L+EK+K Sbjct: 7 VLKQILDFLFLYTKSYGVAIIVLTALIKLVLLPFSFQQFQSIKKMQEIAPLQKKLQEKYK 66 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 + L + +++LY+ + +NP+ GC P+L+Q P A++ ++ + WI D Sbjct: 67 NDKEK-LNRELLKLYQENKVNPMGGCLPLLIQFPFIIALFSLLQH--HNFGNEGFLWIAD 123 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQAMILNWM 523 L A D T + P++ +++ ++ K+ P D Q+ + M Sbjct: 124 LGAPDRTF-------------------VLPLLAAVTTYVSSKIGMPQNPDNPQSSMNLIM 164 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH-GAEIGLI 567 V + FP+GL +YW SN+I I+QQ +IM+ + + Sbjct: 165 SAVIGWMALKFPSGLALYWVVSNLIQILQQVIIMRSTASVKEEVK 209 >gi|253582576|ref|ZP_04859797.1| inner membrane protein oxaA [Fusobacterium varium ATCC 27725] gi|251835446|gb|EES63986.1| inner membrane protein oxaA [Fusobacterium varium ATCC 27725] Length = 205 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 61/215 (28%), Positives = 116/215 (53%), Gaps = 22/215 (10%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + ++ + +NL GNFG+AI+ T+ +K++ PL KQ S +MK +QP++D+++E++K Sbjct: 11 IIESMLVFMHNLTGNFGLAIIGVTILMKIILLPLTLKQDKSMKSMKKLQPELDKIKEQYK 70 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 ++L + ++LY+ H +NP GC P+L+Q+P+ +A++ V+ + + + W++ Sbjct: 71 G-DSKMLNQKTMELYQKHKVNPAGGCLPLLVQLPILWALFGVLRGGI-VPQDSTFLWMQ- 127 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L DP I P++ + F+Q K+ + ++ P Sbjct: 128 LVQPDPYY-------------------ILPVLNGVVSFVQQKVMGSSDNPQMKNMMYMFP 168 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ VF PAGL IYW S++ ++QQ +IMK Sbjct: 169 IMMVFISYKMPAGLQIYWLTSSLAGVIQQYLIMKK 203 >gi|310644873|ref|YP_003949632.1| membrane protein insertase, yidc/oxa1 family [Paenibacillus polymyxa SC2] gi|309249824|gb|ADO59391.1| Membrane protein insertase, YidC/Oxa1 family [Paenibacillus polymyxa SC2] Length = 288 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 124/246 (50%), Gaps = 28/246 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 ++ W ++ + F G +G+A+++ + V+ + PL KQ S+ M Sbjct: 39 DLANGSWWQRYVVYWFSYALDTFAQWFSGEYGLAVLILVIIVRTIILPLTLKQVRSSRAM 98 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + IQP++ E++ K+K +P +Q+ ++L++ + +NP+AGC P+L+Q+P+F A+Y I Sbjct: 99 QAIQPQLKEIQAKYKDTPE-RVQQETMKLFQENKVNPMAGCLPLLVQMPIFIALYNAIYY 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ----M 505 + +R + W++ L D I PI+ +++ FIQ M Sbjct: 158 NSALRD-HDFLWLQ-LGKPDHFF-------------------ILPILAAITTFIQTWMMM 196 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 KM+P P +L PV+ +F +FP+ L +YW +SN+ +IVQ + + + + Sbjct: 197 KMNPTPQQGPMQFLLYVYPVLILFMSYNFPSALPLYWFFSNIYTIVQNYFLYRNND-KDA 255 Query: 566 LIDRLR 571 + ++ Sbjct: 256 ALANVK 261 >gi|313611878|gb|EFR86333.1| stage III sporulation protein J [Listeria monocytogenes FSL F2-208] Length = 277 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 63/230 (27%), Positives = 115/230 (50%), Gaps = 27/230 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + + + + G++ + I++ T+ ++LL PL KQ S M N+QPKI EL Sbjct: 35 YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 94 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 95 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 154 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L DP I P++ +L+ F+ K+S + Sbjct: 155 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 193 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + Sbjct: 194 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNK 243 >gi|261420019|ref|YP_003253701.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC61] gi|297530020|ref|YP_003671295.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. C56-T3] gi|319766834|ref|YP_004132335.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC52] gi|261376476|gb|ACX79219.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC61] gi|297253272|gb|ADI26718.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. C56-T3] gi|317111700|gb|ADU94192.1| membrane protein insertase, YidC/Oxa1 family [Geobacillus sp. Y412MC52] Length = 249 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 125/245 (51%), Gaps = 27/245 (11%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 + P E YF+ +L++ + N+GIAI++ T+ V+ PL KQ+ Sbjct: 19 NRNEPINEHSQGIWNHYFVYPMSKLLLTLGHWFGDNYGIAIIVLTLIVRFCLLPLILKQF 78 Query: 384 VSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 ++ M+ ++P++ +L+EK+K P + LQ+ M+QLY+ H +NP +GC P+L+Q+P+F Sbjct: 79 RASLAMQKLRPELLKLQEKYKSKDPETQRKLQQEMMQLYQKHGVNPASGCLPVLIQMPIF 138 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y IS + E++ + W++ L DP I P++ +L+ Sbjct: 139 MALYYAISRTQEIKTHS-FLWVE-LGHRDPYF-------------------ILPVLAALT 177 Query: 501 MFIQMKMSPPPAD---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 FI +++SP A+ AM+ MPV+ SS P+ L +YW SI+Q ++ Sbjct: 178 TFISLRLSPSMAEEQMPQMAMMSYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLILR 237 Query: 558 KMHGA 562 A Sbjct: 238 SQLKA 242 >gi|242032277|ref|XP_002463533.1| hypothetical protein SORBIDRAFT_01g001520 [Sorghum bicolor] gi|241917387|gb|EER90531.1| hypothetical protein SORBIDRAFT_01g001520 [Sorghum bicolor] Length = 470 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 98/199 (49%), Gaps = 18/199 (9%) Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+++QP++ ++E++ + +Q +LYK ++PLAGC P L+ IPV+ +Y+ +S Sbjct: 119 MRSLQPQVKAIQERYAG-DQERIQLETARLYKLSGVDPLAGCLPTLVTIPVWIGLYRALS 177 Query: 449 I-SLEMRHAPFWGWIKDLAAADPTN-------IFTLF----GILPFYLPGFMHVGIWPII 496 + E + WI LA I LF G P + + P++ Sbjct: 178 NVANEGLLTEGFFWIPSLAGPTTIAARQNGQGISWLFPFTDGHPPLGWSDTLAYLVLPVL 237 Query: 497 MSLSMFIQMKMSPPPA--DKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + +S +I ++ PP D Q + ++P++ + S P+GL +YW +N++S Sbjct: 238 LVISQYISTQVMQPPQSNDPSQQGAQAVTKFLPLLIGYFALSVPSGLGLYWLTNNILSTA 297 Query: 552 QQAVIMKMHGAEIGLIDRL 570 QQ + K+ GA+ + + + Sbjct: 298 QQVWLQKLGGAKNPVKEYI 316 >gi|308071641|ref|YP_003873246.1| membrane protein oxaA 1 precursor [Paenibacillus polymyxa E681] gi|305860920|gb|ADM72708.1| Membrane protein oxaA 1 precursor [Paenibacillus polymyxa E681] Length = 288 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 127/246 (51%), Gaps = 28/246 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 ++ W ++ + F G +G+A+++ + V+ + PL KQ S+ M Sbjct: 39 DLANGSFWQRYVVYWFSYALDTFAQWFSGEYGLAVLILVIIVRTIILPLTLKQVRSSKAM 98 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + IQP++ E++ K+K +P + +Q+ ++L++ + +NP+AGC P+++Q+P+F A+Y I Sbjct: 99 QAIQPQLKEIQAKYKDTPEK-VQQETMKLFQENKVNPMAGCLPLVVQMPIFIALYNAIYY 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ----M 505 + +R + W++ L D H+ I PI+ +++ F+Q M Sbjct: 158 NSALRD-HDFLWLQ-LGKPD-------------------HLFILPILAAITTFVQTWMMM 196 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 KM+P P +L PV+ +F +FP+ L +YW +SN+ +I+Q + + + + Sbjct: 197 KMNPTPQQGPMQFLLYVYPVLILFMSYNFPSALPLYWFYSNIYTIIQNYFLYR-NKDKEA 255 Query: 566 LIDRLR 571 + ++ Sbjct: 256 ALANVK 261 >gi|319651097|ref|ZP_08005231.1| OxaA-like protein [Bacillus sp. 2_A_57_CT2] gi|317397267|gb|EFV77971.1| OxaA-like protein [Bacillus sp. 2_A_57_CT2] Length = 250 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 30/252 (11%) Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + ++ P + Y + ++ G++G++I++ T+ ++L Sbjct: 2 FVMALLSGCTEINQPITSESEGFWNEYIVYPLSLFIIKVAEFAGGSYGLSIIIVTIIIRL 61 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGC 430 + PL KQ S+ M+ IQP++ +LREK+ Q LQ+ + L++ H +NPLAGC Sbjct: 62 VILPLMIKQTRSSKAMQAIQPEMQKLREKYSSKDQKTQQKLQQETMALFQKHGVNPLAGC 121 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 +P+++Q+P+ Y I+ + E+ + + W DL + DP + Sbjct: 122 FPLVIQMPILIGFYHAITRTREIAN-HNFLWF-DLGSPDP-------------------I 160 Query: 491 GIWPIIMSLSMFIQMKMSPPPADKG-----QAMILNW-MPVVFVFALSSFPAGLIIYWSW 544 + P+I ++ FIQ KM + Q ++ + MP++ V +FPA L +YW Sbjct: 161 YLLPLIAGVTTFIQQKMMMAGTQQTGQMAAQMKMMLYLMPIMIVIFAINFPAALSLYWVV 220 Query: 545 SNVISIVQQAVI 556 N+ IVQ I Sbjct: 221 GNIFMIVQTYFI 232 >gi|297585590|ref|YP_003701370.1| YidC/Oxa1 family membrane protein insertase [Bacillus selenitireducens MLS10] gi|297144047|gb|ADI00805.1| membrane protein insertase, YidC/Oxa1 family [Bacillus selenitireducens MLS10] Length = 296 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 37/258 (14%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W F P+ LM+ + N +G+AI++ T+ +++L PL KQ ST M+ IQP+ Sbjct: 45 IWDPFFVYPLSWLMTTIAEFLNNSYGLAIIIVTIMLRILILPLMIKQTKSTKAMQAIQPQ 104 Query: 396 IDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS-- 450 + EL++K+ + LQ+ + L++ + +NPLAGC PI +Q+P+ A Y I + Sbjct: 105 MKELQQKYSAKDKKTQEKLQQETMALFQENKVNPLAGCLPIFIQMPILIAFYHAIIRTPQ 164 Query: 451 ---------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 + M + W + L +ADP I P++ + Sbjct: 165 INPNIDERYVGMYEPQQFLWFE-LGSADPYF-------------------ILPLVAGATT 204 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 FIQ +M + ++L MP++ + + FP+ L +YW N+ IVQ I + Sbjct: 205 FIQQRMMMVQDNPQMKVLLYVMPIMIMAFAAFFPSALALYWVIGNIFMIVQTQFITGPNV 264 Query: 562 AEIGLIDRLRSTFSKNYN 579 + ++ + K Sbjct: 265 GKTE--EQQKEENKKKPQ 280 >gi|148658060|ref|YP_001278265.1| 60 kDa inner membrane insertion protein [Roseiflexus sp. RS-1] gi|148570170|gb|ABQ92315.1| 60 kDa inner membrane insertion protein [Roseiflexus sp. RS-1] Length = 330 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 55/256 (21%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + ++ FY G+ G AI+L T+ +++ PL K S+ M+ +QP Sbjct: 1 MPIWLAFVEFLQQVLLTFYRWTGSAGFAIILFTIVARIVILPLTIKSLQSSRKMQELQPH 60 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI------ 449 + EL+ K+ PQ LQ+ ++LY+ + +NP+ GC P+LLQ+P+F +Y+ + Sbjct: 61 MKELQRKY-GKDPQKLQEETMRLYREYKVNPVGGCLPMLLQLPIFLGVYQAVINLTRVSP 119 Query: 450 -----SLEMR--------------------HAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 S +R A + W+ DL DP Sbjct: 120 AEHAGSAMLRVLNEQGIAVGVASATLGQPQLAGSFLWLPDLGKTDPYY------------ 167 Query: 485 PGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQAMILNWM---PVVFVFALSSFPAGLII 540 I PI+ + I M +P D Q ++ M P+VF + FP+G ++ Sbjct: 168 -------ILPILSVIFQLIVQLMATPRVQDPQQKAMMQSMLILPIVFGYIGFIFPSGAVL 220 Query: 541 YWSWSNVISIVQQAVI 556 YW +++SI+QQ VI Sbjct: 221 YWVVGSILSIIQQYVI 236 >gi|116672711|ref|YP_833644.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24] gi|116612820|gb|ABK05544.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24] Length = 324 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 24/230 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQK 413 + ++I+ + ++ P+ KQ + M+ +QP + +L++K+K Q + + Sbjct: 37 WTWTLSIIGLVLVIRAALIPVFVKQIKAQRGMQLLQPDLKKLQDKYKGKTDQLSRQAMAQ 96 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD---LAAADP 470 + +YK H NP + C P+L+Q+P FFA+++V+S R + D Sbjct: 97 EQMAMYKKHGTNPFSACLPMLIQMPFFFALFQVLSGITAARTKGAGIGAMSHEQVVQFDD 156 Query: 471 TNIFT-------LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP----------PAD 513 ++IF L G ++ + + M+ S FI K P Sbjct: 157 SSIFGATLSASLLHGGAGNQTAVWILSIVMILAMTASQFITQKQIMAKNMSEEAMASPFM 216 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + Q M+L +PVVF +FP G++IYW+ +N+ ++ QQ +++ Sbjct: 217 RQQKMMLYILPVVFGVGGINFPIGVLIYWTTTNLWTMAQQFFVIRRMPTP 266 >gi|228949208|ref|ZP_04111476.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810491|gb|EEM56844.1| Membrane protein oxaA 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 255 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 27/245 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 I ++ P YF+ ++ + N+G+AI++TT+ ++ P Sbjct: 17 ITAGCSEVNQPITPKSTGIWNEYFVYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLP 76 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPIL 434 L KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI Sbjct: 77 LMIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQKMMQLYQKNGVNPLAGCLPIF 136 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ FA Y I + E+ + W DL ADP I P Sbjct: 137 VQMPILFAFYHAIMRTSEI-SKHTFLWF-DLGQADPYY-------------------ILP 175 Query: 495 IIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ +++ FIQ K++ + AM+L MP++ + +FPA L +YW N+ I Sbjct: 176 VVAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIA 235 Query: 552 QQAVI 556 Q +I Sbjct: 236 QMYLI 240 >gi|313640128|gb|EFS04745.1| stage III sporulation protein J [Listeria seeligeri FSL S4-171] Length = 287 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 27/230 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + +++ + G++ I I++ T+ ++LL PL KQ S M N+QPKI EL Sbjct: 45 YIVFPLSWVITWFSDLFGGSYAIGIIVVTILIRLLIMPLMVKQLKSQKAMTNLQPKIKEL 104 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 + K+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 105 QTKYASKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIK-T 163 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L + DP I PI+ +L+ F K+S + Sbjct: 164 DTFLWMQ-LGSPDPYF-------------------ILPIVAALTTFASSKISMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNK 253 >gi|302870728|ref|YP_003839365.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora aurantiaca ATCC 27029] gi|315506965|ref|YP_004085852.1| membrane protein insertase, yidc/oxa1 family [Micromonospora sp. L5] gi|302573587|gb|ADL49789.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora aurantiaca ATCC 27029] gi|315413584|gb|ADU11701.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora sp. L5] Length = 333 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 26/258 (10%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYVSTANM 389 I W + + + + + N+ I+ V V+++ FP+ KQ S M Sbjct: 9 YAISWILLTWHSAWDAIGVPVGAVIGTNWAWILAIVFLVVTVRVILFPVFVKQIKSQRAM 68 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QPK+ EL+EK K + LQK M++LY+ NPL GC P+ LQIPVF ++ + Sbjct: 69 QALQPKVKELQEKHKG-DRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHTLRR 127 Query: 450 -SLEMRHAPFWGWIKD--------------LAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 S + + +GW D ++ + L + + GI Sbjct: 128 LSPDNQGKTLYGWTVDQFNSASNATLFTAPISGKFGSTADELSRLGASTGTVKVVAGILV 187 Query: 495 IIMSLSMFIQMK----MSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSN 546 IIM + ++ + + D Q M+ M P+ + + + FP G+IIYW +N Sbjct: 188 IIMIATTYLTSRQMILKTGWAEDPQQRMVQRLMLYGIPLSLLISGAIFPIGVIIYWVTNN 247 Query: 547 VISIVQQAVIMKMHGAEI 564 + ++ QQ +++ Sbjct: 248 LFTLGQQQWVLRKFPPPP 265 >gi|15616626|ref|NP_244932.1| OxaA-like protein precursor [Bacillus halodurans C-125] gi|38503226|sp|Q9RCA5|OXAA1_BACHD RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|5672644|dbj|BAA82682.1| 62%-identity [Bacillus halodurans] gi|10176689|dbj|BAB07783.1| stage III sporulation protein J [Bacillus halodurans C-125] Length = 257 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 67/242 (27%), Positives = 115/242 (47%), Gaps = 25/242 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 YF+ ++++ + G+FG+AI++ T+ ++LL PL KQ ST M+ +QP++ Sbjct: 38 SYFVYPLSWLMIYFANAFNGSFGLAIIVVTLLIRLLILPLMIKQLKSTRAMQALQPEMQA 97 Query: 399 LREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 LREK+ Q Q LQ+ + L++ H +NPLAGC+P+L+Q+P+ A Y I + E+ Sbjct: 98 LREKYSAKDQRTQQKLQQETMALFQKHGVNPLAGCFPVLIQMPILLAFYHAIMRTREI-G 156 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 + W L DP + PII ++ F+Q KM + Sbjct: 157 DEHFLWFV-LNQPDPI--------------------LLPIIAGITTFLQQKMMMVTDNPQ 195 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 ++L MPV+ + P+ L +YW N+ I+Q I + + ++ Sbjct: 196 MKVLLYVMPVMILVFAMFLPSSLALYWVIGNLFMILQTYFITGPNVGAKKVAADVKVGGK 255 Query: 576 KN 577 K Sbjct: 256 KK 257 >gi|156530446|gb|ABU75304.1| chloroplast PPF-1 [Citrus trifoliata] Length = 452 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 27/271 (9%) Query: 337 GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GWF FI++ M ++ ++ ++G AI+L TV VK+ FPL KKQ ST M+ Sbjct: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449 N+QPKI +++++ + + +Q +LY+ +NPLAGC P L IPV+ +Y+ +S Sbjct: 162 NLQPKIKAIQQRYAGN-QERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-----------PIIMS 498 + E + WI L+ + + LP P+++ Sbjct: 221 ANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLV 280 Query: 499 LSMFIQMKMSPPPAD-KGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 +S + M PP D Q + ++P++ + S P+GL IYW +NV+S QQ Sbjct: 281 VSQYAMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQV 340 Query: 555 VIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581 + K+ GA+ + + + + +K SQ Sbjct: 341 WLRKLGGAKPVVTENASEIITAGRAKRSVSQ 371 >gi|156741411|ref|YP_001431540.1| 60 kDa inner membrane insertion protein [Roseiflexus castenholzii DSM 13941] gi|156232739|gb|ABU57522.1| 60 kDa inner membrane insertion protein [Roseiflexus castenholzii DSM 13941] Length = 345 Score = 135 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 56/257 (21%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + ++ FY G+ G+AI+L T+ +LL PL K S+ M+ +QP Sbjct: 1 MPVWLAFVEFLQQVLLTFYAWTGSAGLAIILFTIVARLLILPLTIKSLQSSRKMQELQPH 60 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI------ 449 + EL+ K+ PQ LQ+ ++LY+ + +NP+ GC P+LLQ+P+F +Y+ + Sbjct: 61 MKELQRKY-GKDPQKLQEETMRLYREYKVNPVGGCLPMLLQLPIFLGVYQAVINLTRVSP 119 Query: 450 -----SLEMR---------------------HAPFWGWIKDLAAADPTNIFTLFGILPFY 483 S +R A + W+ DL DP Sbjct: 120 AEHAGSAMLRVLNEQGIAFSTATTATLGQPQLAGSFLWLPDLGKTDPYY----------- 168 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQAMILNWM---PVVFVFALSSFPAGLI 539 I PI+ + I M +P D Q ++ M P+VF + FP+G + Sbjct: 169 --------ILPILSVIFQLIVQLMATPRIQDPQQKAMMQSMLILPIVFGYIGFIFPSGAV 220 Query: 540 IYWSWSNVISIVQQAVI 556 +YW +++SI+QQ VI Sbjct: 221 LYWVVGSILSIIQQYVI 237 >gi|150389948|ref|YP_001319997.1| 60 kDa inner membrane insertion protein [Alkaliphilus metalliredigens QYMF] gi|149949810|gb|ABR48338.1| 60 kDa inner membrane insertion protein [Alkaliphilus metalliredigens QYMF] Length = 217 Score = 135 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 73/231 (31%), Positives = 118/231 (51%), Gaps = 31/231 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ +P+ L+ ++++GN+GIAI++ TV VKL PL KQ S M+ IQP I E Sbjct: 1 MNFLTQPLGALLKIIFDVIGNYGIAIIVFTVLVKLAMVPLTMKQTKSMKKMQEIQPMIKE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI------SLE 452 L+E+ K Q+ K +++LYK +N++P GC P+L+Q P+ ++ V+ +LE Sbjct: 61 LQEQHKDDKEQMNIK-VMELYKEYNVSPFGGCLPLLIQFPIIIGLFTVLREPMDYGFTLE 119 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + A + WI +LA ADP I P++ L+ ++ Sbjct: 120 VIQAG-FLWIPNLAEADPW--------------------ILPLLAGLTTYLSSISMAATG 158 Query: 513 ---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 D Q ++ + P++ + SFPAGL +YW SN+ QQ VI K + Sbjct: 159 NKKDPTQVIMKYFFPIMIFWWGRSFPAGLTLYWVISNLFQAGQQIVINKPY 209 >gi|91228356|ref|ZP_01262284.1| putative inner membrane protein translocase component YidC [Vibrio alginolyticus 12G01] gi|91188116|gb|EAS74420.1| putative inner membrane protein translocase component YidC [Vibrio alginolyticus 12G01] Length = 320 Score = 135 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 91/286 (31%), Gaps = 13/286 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + I L+++ +Q + V E E+ + + V Sbjct: 1 MDSQRN-ILLIGLALVSFLLFQQWQVAKNPEPQAVEQAQSSSTLPAPSFADELDPVPGQQ 59 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +A A + + L SI+ G NL Y ++ S+ V L + + Sbjct: 60 QASA----KTITVTTDVLTLSIDTVGGDVVHANLNEYSAELDSSDSFVLL--KDAQGHQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDE 176 A+ V + +N+ + + +L F + I Sbjct: 114 IAQSGLVGPQGIDLSSTNRPHYNVSADRFTMADGQDELRVPMTFTANGIEYTKTYIFKRG 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y + V NNS + F + ++ + T G D + + Sbjct: 174 SYALNVEYDVVNNSGNNATFGMYAHLRQNLMDDGGSITMPTYRGGAYSTEDTRYKKYSFD 233 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 D++ ++S W + Y+A+ +IP E + + + + Sbjct: 234 DMQDRNLSLNLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGN 279 >gi|9886727|emb|CAC04249.1| PPF-1 protein [Pisum sativum] Length = 442 Score = 135 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 83/348 (23%), Positives = 146/348 (41%), Gaps = 35/348 (10%) Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 T S + S R K + + P +S++ + L + + D + Sbjct: 13 GTPLPSLHRTFSPNRTRLFTKVQFSFHQLPPIQSVSHSVDLSGIFARAEGLLYTLADATV 72 Query: 328 PRFEMLIDW-------GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLL 374 GWF FI+ M ++ ++ ++G AI+L T VK Sbjct: 73 AADAAASTDVAAQKNGGWFGFISDGMEFVLKVLKGGLSSVHVPYSYGFAIILLTGIVKAA 132 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 PL K+Q ST M+N QPKI ++E++ + + +Q +LY +NPLAGC P L Sbjct: 133 TLPLTKQQVESTLAMQNPQPKIKAIQERYAGN-QERIQLETSRLYTQAGVNPLAGCLPTL 191 Query: 435 LQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPF 482 IPV+ +Y+ +S + E + WI L + I LF G P Sbjct: 192 ATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPL 251 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMS--PPPADKGQAM---ILNWMPVVFVFALSSFPAG 537 + P+++ +S ++ M++ P D Q I ++P++ + S P+G Sbjct: 252 GWYDTAAYLVLPVLLIVSQYVSMEIMKPPQTNDPNQKNTLLIFKFLPLMIGYFSLSVPSG 311 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581 L IYW +NV+S + + K+ GA+ + + + + +K S+ Sbjct: 312 LTIYWFTNNVLSTAHKVWLRKLGGAKPAVNENAGGIITAGQAKRSASK 359 >gi|332971199|gb|EGK10162.1| stage III sporulation protein J [Desmospora sp. 8437] Length = 261 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 66/226 (29%), Positives = 121/226 (53%), Gaps = 22/226 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W + P+ L+ +F +++G++G+AI+ T+ ++L+ PL KQ S+ M+ +QP++ Sbjct: 56 WEKYFVFPLQQLLDFFNDVLGSWGLAILAATILIRLVVLPLTLKQMKSSRAMQVLQPEMK 115 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+EK+K + Q LQ+ ++L++ HN+NPLAGC P+L+Q+P+ A Y+ I + Sbjct: 116 KLQEKYKNN-QQKLQEETMKLFQKHNVNPLAGCLPMLIQLPILIAFYQAIMREPTIA-KS 173 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W++ L DP I P++ +L+ ++Q + + Q Sbjct: 174 SFLWMQ-LGEQDPYY-------------------ILPLLAALTTYLQSVVMGMGDNPQQR 213 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 L MPV+ FPA L +YW +SN+ ++VQ I + A+ Sbjct: 214 AFLFIMPVMIFVLAFQFPAALPLYWIYSNLFTMVQYYFIGDKYKAK 259 >gi|213865391|ref|ZP_03387510.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 110 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 20/114 (17%) Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 ++ S+E+RHAPF WI DL+A DP I PI+M ++MF Sbjct: 1 MLMGSIELRHAPFALWIHDLSAQDPYY-------------------ILPILMGVTMFFIQ 41 Query: 506 KMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 KMSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 42 KMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 95 >gi|297572341|ref|YP_003698115.1| membrane protein insertase, YidC/Oxa1 family [Arcanobacterium haemolyticum DSM 20595] gi|296932688|gb|ADH93496.1| membrane protein insertase, YidC/Oxa1 family [Arcanobacterium haemolyticum DSM 20595] Length = 377 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 114/256 (44%), Gaps = 30/256 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + + + + ++I+ T+ +++L PL KQ + + IQP++ Sbjct: 13 SWIMYGIHSVLTALGLSSGSGAAWVLSIVGLTIVIRILIIPLFNKQIRAMRMGQEIQPEV 72 Query: 397 DELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---- 448 +L++K+K Q Q+ ++ LY+ +P A C P+L+Q+P+FFA+++++ Sbjct: 73 QKLQKKYKGRTDAVSKQRQQEELMALYRERGTSPFASCLPLLIQMPIFFALFRLLYAVDP 132 Query: 449 ---------ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +++ A A +++ T G P + I ++M Sbjct: 133 ISKGQMGTIGAVDKTVAHEIANSTLFGAPLSSSLGTA-GTFPLPTNVRIVAIILIVLMMA 191 Query: 500 SMFIQMKMSPP------------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 ++F KM PA K Q M+L MP++++F +F G+++YW SN+ Sbjct: 192 TLFFSQKMIMTKNMPESAQDPDNPAYKMQKMMLYGMPIIYIFTGFAFQVGVLVYWLTSNL 251 Query: 548 ISIVQQAVIMKMHGAE 563 +I QQ ++ + Sbjct: 252 WNIGQQYWLITYNPTP 267 >gi|304437936|ref|ZP_07397882.1| stage III sporulation protein J [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369076|gb|EFM22755.1| stage III sporulation protein J [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 224 Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 21/186 (11%) Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 + +PL KQ S M++IQPK+ +++EK+ + PQ+LQ+ +L++ +NPLAGC P+ Sbjct: 49 VTYPLTVKQVKSMKAMQDIQPKMKKIQEKY-KHDPQMLQQKTGELFREAGVNPLAGCLPL 107 Query: 434 LLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 L+Q+P+ +Y + + A + W+ ++ DP I Sbjct: 108 LVQMPILMGMYYALFNFTFPSAEAAAFFWLPSMSEPDPYY-------------------I 148 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P++ + + F+Q KM+ +++ MP+ + +FP+GL++YW NV+ I Q Sbjct: 149 LPVLSAATTFLQQKMTSSEMTGQMKIMMTVMPLFIGWISLTFPSGLVLYWVTMNVVQIAQ 208 Query: 553 QAVIMK 558 Q + + Sbjct: 209 QWWMYR 214 >gi|317131004|ref|YP_004097286.1| membrane protein insertase, YidC/Oxa1 family [Bacillus cellulosilyticus DSM 2522] gi|315475952|gb|ADU32555.1| membrane protein insertase, YidC/Oxa1 family [Bacillus cellulosilyticus DSM 2522] Length = 268 Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats. Identities = 74/224 (33%), Positives = 109/224 (48%), Gaps = 13/224 (5%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W F P+ LM N+ N FGI+I++ T+ +++L PL KQ ST M+ IQP++ Sbjct: 36 WDSFFVYPLSWLMIEIANIFNNSFGISIIIVTLLIRILILPLMIKQTKSTKAMQAIQPEM 95 Query: 397 DELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 ELREK+ Q QK + L++ H +NPLAGC PIL+Q+P+ A Y I + Sbjct: 96 KELREKYSAKDQQTQQKLQQETMALFQKHGVNPLAGCLPILVQMPILIAFYHAIIRT--- 152 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 P+ D+A L F L I P+I + FIQ KM + Sbjct: 153 ---PYINPEVDIA---NYGHLDPQVFLWFELGHADPYYILPLIAGATTFIQQKMMMVTDN 206 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M++ MP++ + + FP+ L +YW N+ IVQ I Sbjct: 207 PQMRMMMYIMPLMIMAFAAFFPSALALYWVIGNLFMIVQTYFIT 250 >gi|255581095|ref|XP_002531362.1| Inner membrane protein PPF-1, chloroplast precursor, putative [Ricinus communis] gi|223529022|gb|EEF31010.1| Inner membrane protein PPF-1, chloroplast precursor, putative [Ricinus communis] Length = 449 Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats. Identities = 82/356 (23%), Positives = 150/356 (42%), Gaps = 34/356 (9%) Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 + +PS + Q L K + I P + + +F ++ + Sbjct: 11 FIGAPLPSSSSRHGLQHSLLPSRRFISTTKVKFSLHEIPPITHLDSVDFNSIVSRAESLL 70 Query: 319 HHYEKDLAIPRFEMLIDW------GWFYFIAKPMFMLMSYFY------NLVGNFGIAIML 366 + D GWF FI++ M ++ ++ ++G AI+L Sbjct: 71 YTLADAAVAVDSSAATDTAVQKNNGWFGFISEGMEFVLKVLKDGLSSVHVPYSYGFAIIL 130 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP 426 TV VK+ PL K+Q ST M+N+QPKI +++++ + + +Q +LY+ +NP Sbjct: 131 LTVIVKIATLPLTKQQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLETSRLYRQAGVNP 189 Query: 427 LAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 LAGC+P L IPV+ +Y+ +S + E + WI L + + P Sbjct: 190 LAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLFP 249 Query: 486 GFMHVGIW-----------PIIMSLSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFVF 529 P+++ +S ++ M++ PP D Q + ++P++ + Sbjct: 250 FVDGHPPLGWYDTAAYLVLPVLLVVSQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGY 309 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581 S P+GL IYW +NV+S QQ + K+ GA+ + + + +K SQ Sbjct: 310 FSLSVPSGLSIYWFVNNVLSTAQQVWLRKLGGAKPVVDQNASGIITAGRAKRSASQ 365 >gi|284049399|ref|YP_003399738.1| membrane protein insertase, YidC/Oxa1 family [Acidaminococcus fermentans DSM 20731] gi|283953620|gb|ADB48423.1| membrane protein insertase, YidC/Oxa1 family [Acidaminococcus fermentans DSM 20731] Length = 207 Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 109/203 (53%), Gaps = 22/203 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 ++G+AI++ T+ +KL+ PL KQ ST M IQPK+ EL+ ++K L + M + Sbjct: 25 PSYGLAIIIMTILIKLILSPLTAKQIASTRAMSRIQPKMKELQARYKDDKVT-LNQKMSE 83 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK+ +NPLAGC P+L+Q+P+ I+ I + + W++ +A DP Sbjct: 84 LYKSEGVNPLAGCLPLLIQMPIMIGIFYGIR-DFQYAGPSSFLWMQSIADPDPYY----- 137 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-NWMPVVFVFALSSFPA 536 I PI+ +L+ FIQ K + PP+D Q I+ +MP+ + FPA Sbjct: 138 --------------ILPILSALTTFIQSKQTMPPSDNPQGKIMLYFMPLFIGYISLKFPA 183 Query: 537 GLIIYWSWSNVISIVQQAVIMKM 559 GL++YW N++ I QQ ++ + Sbjct: 184 GLVLYWVVMNIMQIGQQFLLDRK 206 >gi|158321892|ref|YP_001514399.1| 60 kDa inner membrane insertion protein [Alkaliphilus oremlandii OhILAs] gi|158142091|gb|ABW20403.1| 60 kDa inner membrane insertion protein [Alkaliphilus oremlandii OhILAs] Length = 220 Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats. Identities = 70/234 (29%), Positives = 117/234 (50%), Gaps = 32/234 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +A+P L+ ++L N+G++I+L T+ KLL PL KQ S M+ IQPK+ + Sbjct: 1 MNALARPFGALLKLIFDLTNNYGLSIILFTIVTKLLTLPLTIKQNKSMKEMQEIQPKLKK 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS---LEMRH 455 L+EK+K P Q+ K ++LYK HN++P GC P+L+Q P+ ++ + + Sbjct: 61 LQEKYKNDPEQLNIK-TMELYKEHNVSPFGGCLPLLIQFPIIIGLFAAVREPGTYVFGSQ 119 Query: 456 APF------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--MKM 507 A + + W+ +L ADP I PI+ L+ ++ Sbjct: 120 AAYEAINTSFLWLPNLTVADPW--------------------ILPILAGLTTYLSSATLT 159 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 S AD+ Q ++ +MPV+ + +FPAGL +YW SNV +QQ ++ + Sbjct: 160 SGKSADQTQKIMTYFMPVMIFWWGKTFPAGLTLYWFVSNVFQTIQQLILRRPQK 213 >gi|148982293|ref|ZP_01816700.1| putative inner membrane protein translocase component YidC [Vibrionales bacterium SWAT-3] gi|145960558|gb|EDK25915.1| putative inner membrane protein translocase component YidC [Vibrionales bacterium SWAT-3] Length = 291 Score = 134 bits (336), Expect = 5e-29, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 89/286 (31%), Gaps = 13/286 (4%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL+++ +Q + V E+ + + Sbjct: 1 MDSQRN-ILLIALALVSFLLFQQWNVAKNPAPQAVEQAQSGSTLPAPSYADDLDPAPG-- 57 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 Q S + + + L SI+ G NL Y + S V L + + + Sbjct: 58 --QVASSAKTITVTTDVLTLSIDTVGGDVVTANLNDYSAEFDSEESFVLL--KNEPGHQF 113 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL----TPTTPIKLVFKNANNILFERTISLDE 176 A+ V + + + + I + ++ + I Sbjct: 114 IAQSGLVGPQGIDLSSTNRPSYTVSADSFTLADGQDELRIPMTYQANGLDYTKTFILKRG 173 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN-TFGVQEGFIAVLGDKSLVEQKYS 235 Y + V NNS + F + ++ + T G D + + Sbjct: 174 SYAIDVEYDVVNNSGNNATFGMYAHLRQNVMDDGGSLTMPTYRGGAYSTEDTRYKKYSFD 233 Query: 236 DIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLSD 280 D++ ++S + W + Y+AS +IP E + + + + Sbjct: 234 DMQDRNLSLNLANGQGWAAMIQHYFASAWIPRDEAGSNLYTRVIGN 279 >gi|291294533|ref|YP_003505931.1| 60 kDa inner membrane insertion protein [Meiothermus ruber DSM 1279] gi|290469492|gb|ADD26911.1| 60 kDa inner membrane insertion protein [Meiothermus ruber DSM 1279] Length = 459 Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats. Identities = 82/323 (25%), Positives = 142/323 (43%), Gaps = 45/323 (13%) Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF 309 W +A P T + + I + + + ++ Sbjct: 179 GWQTHKASGFAMFIRPQTPTPITLT-------------QLNGAGIAEISVPAGSLNLKVY 225 Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTT 368 GA E + + + I+ + L+ + LVG + AI+L T Sbjct: 226 GGANELVRLSVE----NFYELPGVFQPNIWGQISLGLLWLLEEAHRLVGGSWVLAIVLVT 281 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + ++LL +PL +QY S A M+ IQP + +++EK+K + + Q+ M++LY+ H INPL Sbjct: 282 ILIRLLMWPLMHQQYKSMAEMQKIQPLLKKIQEKYKDNKEK-QQEEMMKLYQEHKINPLG 340 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC+P+LLQ+P+ F +YK I + E + WI DLA DP Sbjct: 341 GCFPLLLQMPILFLMYK-IMVGYEFGQ--GFLWIPDLALPDP------------------ 379 Query: 489 HVGIWPIIMSLSMFIQMKMSPP-PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + + P+I +FI ++ D + I +VF F L SFPAG+ +Y+++ + Sbjct: 380 -IYVLPLIYIAVIFISTLLTSAGNKDAIRQGI--IFNLVFAFILFSFPAGVNLYYTFFTI 436 Query: 548 ISIVQQAVIMKMHGA-EIGLIDR 569 + I QQ I K G + ++ + Sbjct: 437 LGIGQQFYINKQLGISKPSMLAK 459 >gi|269122721|ref|YP_003310898.1| hypothetical protein Sterm_4135 [Sebaldella termitidis ATCC 33386] gi|268616599|gb|ACZ10967.1| 60 kDa inner membrane insertion protein [Sebaldella termitidis ATCC 33386] Length = 219 Score = 133 bits (335), Expect = 6e-29, Method: Composition-based stats. Identities = 62/217 (28%), Positives = 117/217 (53%), Gaps = 12/217 (5%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + GN+GI I+L TV ++++ PL KQ S M++IQP++D+LREK+K Sbjct: 9 VFLTTLKKLSEFTGNYGIGIILLTVLIRVIILPLTIKQEKSMKKMRDIQPEVDKLREKYK 68 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 +P Q +Q M ++YK + +NP+AGC P+ +Q+ +F +++V++ + + + + W + Sbjct: 69 DNP-QEMQIKMQEIYKKNQVNPMAGCLPLFVQMCIFITLFRVLNDANSIPNDATFLWF-N 126 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQAMILN 521 L D G+ F + I+P++ ++ F Q KM +L Sbjct: 127 LKQPDALVKLPFTGM-------FSAINIFPLLNTVVTFFQQKMMSTGTQDSNPQMKTMLY 179 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +P+V + + P+G+ +YW S++++++QQ IMK Sbjct: 180 TLPLVILVMTYNMPSGVSLYWFTSSLLAVIQQFFIMK 216 >gi|323467509|gb|ADX71196.1| Preprotein translocase subunit YidC [Lactobacillus helveticus H10] Length = 303 Score = 133 bits (335), Expect = 6e-29, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 110/264 (41%), Gaps = 21/264 (7%) Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 P +W + + ++ + ++G AI++ T+ ++++ PL Sbjct: 44 QGTNGHVAPVSHNSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIIRVILLPLN 103 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQ 436 ST M+ IQP+I+ELR+K+ + Q+ +LYK +NP GC P+L+Q Sbjct: 104 AISIRSTTKMQGIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQ 163 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 +PV +A+Y I + ++ + W+ DL+ DP I + + + Sbjct: 164 LPVMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAM---------------VF 206 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 LS +I +P A G ++ + M ++ F A + +YW SN+ VQ + Sbjct: 207 TFLSTYISQLATPKSAQNGMTKVMTYGMAIMVGVMALKFQAAITLYWVISNLFQAVQTFI 266 Query: 556 IMKMHGAEIGLIDRLRSTFSKNYN 579 + + + + + Sbjct: 267 LQNPIKFKKEQEAKAEAERERKRK 290 >gi|258646360|ref|ZP_05733829.1| stage III sporulation protein J [Dialister invisus DSM 15470] gi|260403758|gb|EEW97305.1| stage III sporulation protein J [Dialister invisus DSM 15470] Length = 306 Score = 133 bits (335), Expect = 6e-29, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 26/256 (10%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPL 378 F++ + IA M + + Y N+ IAI++ T+ +K L PL Sbjct: 6 GGGGSDFQIPVLSAIVGMIADLMRIGLQICYEFTSGLGFPNYVIAIVVLTILIKTLLLPL 65 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 A KQ S M+ IQP+I ++++K++ P + ++ M +LYK HN +P+AGC P+L+Q+P Sbjct: 66 AVKQIRSMKAMQAIQPEIQKIQKKYRNDPAMM-RQEMGRLYKEHNASPMAGCLPLLIQMP 124 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 A+Y I + WI+ LAA D T I P++ + Sbjct: 125 FLIAMYYAIQGFSYDPLHAGFLWIESLAAEDGTY-------------------ILPVLSA 165 Query: 499 LSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S F+ + P G + +M P++ + FP+GL+IYW SN+ QQ ++ Sbjct: 166 ASTFLVSWQTTPKDAPGNQKTMLFMMPLMIGWMSLHFPSGLVIYWVVSNIYQFFQQLIMF 225 Query: 558 KMHGAEIGLIDRLRST 573 + + + + Sbjct: 226 RGEKGKEMINGPSKKG 241 >gi|238926593|ref|ZP_04658353.1| sporulation associated-membrane protein [Selenomonas flueggei ATCC 43531] gi|238885539|gb|EEQ49177.1| sporulation associated-membrane protein [Selenomonas flueggei ATCC 43531] Length = 224 Score = 133 bits (334), Expect = 7e-29, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 21/207 (10%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + ++G I+L T+ +KL+ +PL KQ S M+ IQPK+ +++EK+ +S PQ+LQ+ Sbjct: 32 LESYGFPIILLTILIKLVTYPLTVKQVKSMKAMQEIQPKMKKIQEKY-KSDPQMLQQKTG 90 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFT 475 +L++ +NPLAGC P+L+Q+P+ +Y + + A + W+ ++ DP Sbjct: 91 ELFREAGVNPLAGCLPLLVQMPILMGMYYALFNFTFPSAEAAAFFWLPSMSEPDPYY--- 147 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 I P++ + + F+Q KM+ +++ MP+ + +FP Sbjct: 148 ----------------ILPVLSAATTFLQQKMTSSEMTGQMKIMMTVMPLFIGWISLTFP 191 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGA 562 +GL++YW NV+ I+QQ + + G Sbjct: 192 SGLVLYWVTMNVVQIIQQWWMYRSEGP 218 >gi|145597099|ref|YP_001161396.1| 60 kDa inner membrane insertion protein [Salinispora tropica CNB-440] gi|145306436|gb|ABP57018.1| 60 kDa inner membrane insertion protein [Salinispora tropica CNB-440] Length = 370 Score = 133 bits (334), Expect = 7e-29, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 113/279 (40%), Gaps = 32/279 (11%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYVSTANM 389 I W + + + L N+ I+ V V+++ FP+ KQ S M Sbjct: 7 YTISWILLRWHQVWDVIGVPEGAVLGTNWAWILAIIFLVVTVRVILFPVFVKQIKSQRAM 66 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ L+EK K + LQK M++LY+ NPL GC P+ LQIPVF ++ V+ Sbjct: 67 QALQPQVKALQEKHKG-DRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHVLRR 125 Query: 450 ---SLEMRHAPFWGWIKDLAAADPTNIFTLF----------------GILPFYLPGFMHV 490 + + +GW D D ++ LF + + Sbjct: 126 LNPNKDESGKTLYGWTVD--QFDSVSVAKLFTAPIAGKFGSSPEELAALGADGTTVKIMA 183 Query: 491 GIWPIIMSLSMFIQMK----MSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYW 542 GI ++M + ++ + + D Q MI M P + + + FP G+IIYW Sbjct: 184 GILVLLMMGTTYLTSRQMILKTGWAEDPQQRMIQRLMLYGIPASLLISGAIFPIGVIIYW 243 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +N+ ++ QQ +++ T ++ Sbjct: 244 VTNNLFTLAQQQWVLRKFPPPPSAKSGTTGTRGAVQPAK 282 >gi|625665|pir||C36925 cbbR 3'-region hypothetical protein - Xanthobacter flavus (fragment) Length = 106 Score = 133 bits (334), Expect = 8e-29, Method: Composition-based stats. Identities = 44/100 (44%), Positives = 70/100 (70%), Gaps = 2/100 (2%) Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 + ++ +G WP+IM ++M++QMK++P P D Q MI NWMP++F F L+ F AGL+IYW+ Sbjct: 6 IGSYLLLGAWPLIMGVTMWVQMKLNPAPPDPTQQMIFNWMPIIFTFMLAHFAAGLVIYWA 65 Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRS--TFSKNYNSQ 581 W+N +S+ QQAVIM+ +G +I L D ++ F K ++ Sbjct: 66 WNNTLSVTQQAVIMRRNGVKIELWDNIKGALGFGKKSAAK 105 >gi|238018226|ref|ZP_04598652.1| hypothetical protein VEIDISOL_00050 [Veillonella dispar ATCC 17748] gi|237864697|gb|EEP65987.1| hypothetical protein VEIDISOL_00050 [Veillonella dispar ATCC 17748] Length = 222 Score = 133 bits (334), Expect = 8e-29, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 105/211 (49%), Gaps = 24/211 (11%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 ++G+AI+L T+ +K + PL KQ S M+ +QP++ EL++K+K P + LQ M Sbjct: 31 YPSYGVAIILLTIVIKAILAPLTVKQIKSMKAMQELQPRMKELQDKYKNDPAK-LQAEMG 89 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYK +NPLAGC P+L+Q+P AI+ + ++ + W+ L DP Sbjct: 90 ALYKEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYDQNYVQFLWLPSLGEPDPMY---- 145 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQAMILN-WMPVVFVFALS 532 I P++ + S +I K + A Q I+ +MP+ + Sbjct: 146 ---------------ILPVLSAASTWIMSKQTSSGASGAAAQQQKIMTIFMPLFIGYISL 190 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +FP+GL+IYW SNV VQQ I K A+ Sbjct: 191 NFPSGLVIYWIVSNVFQFVQQHFIYKGLEAK 221 >gi|261410107|ref|YP_003246348.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus sp. Y412MC10] gi|329925107|ref|ZP_08280051.1| putative stage III sporulation protein J [Paenibacillus sp. HGF5] gi|261286570|gb|ACX68541.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus sp. Y412MC10] gi|328940226|gb|EGG36558.1| putative stage III sporulation protein J [Paenibacillus sp. HGF5] Length = 296 Score = 133 bits (334), Expect = 9e-29, Method: Composition-based stats. Identities = 56/228 (24%), Positives = 112/228 (49%), Gaps = 26/228 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + L ++ G +G+++++ + V+ L PL KQ S+ M+ IQP+I + Sbjct: 48 SNVVYYFTWALDTFATWFNGEYGLSVLVMVLIVRTLILPLTLKQVRSSKAMQAIQPEIQK 107 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+K P + +Q ++L++ + +NP+AGC P+++Q+P+F A+Y I + +R Sbjct: 108 IREKYKDQPEK-VQMETMKLFQENKVNPMAGCLPLIVQMPIFIALYHSIYYNNLLRD-HE 165 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W++ L D I P++ + + + Q KM Q Sbjct: 166 FLWLQ-LGQPDKLF-------------------ILPVLAAATTYFQTKMMMKMNPSPQMG 205 Query: 519 ILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ +M P++ FP+ L +YW +SN+ +IVQ + + + Sbjct: 206 MMQFMLFVYPILIFVMSFQFPSALPLYWFYSNLYTIVQNYFLYRNNDK 253 >gi|309789712|ref|ZP_07684292.1| hypothetical protein OSCT_0243 [Oscillochloris trichoides DG6] gi|308228198|gb|EFO81846.1| hypothetical protein OSCT_0243 [Oscillochloris trichoides DG6] Length = 348 Score = 133 bits (333), Expect = 9e-29, Method: Composition-based stats. Identities = 66/236 (27%), Positives = 116/236 (49%), Gaps = 18/236 (7%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + + ++ +F G+ + I++ T+ +L+ PL S+ M+ IQP I Sbjct: 11 QIWGGFVGLLEQILLWFSTTTGSVALGIVIFTICARLIILPLTLSSLRSSRQMQQIQPLI 70 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMR 454 EL+ K+ Q LQ+ ++LY+ + INP+ GC P+LLQ+P+FF +Y+ + +E R Sbjct: 71 KELQRKY-GKDQQKLQEETLKLYRDYKINPVGGCLPVLLQLPIFFGVYQAVYHLMVVEQR 129 Query: 455 HAPFWGWIKDLAAADPTNIFT--LFGILPFYLPGFMHVG---------IWPIIMSLSMFI 503 G + D +F+ LFGI+ F G + PI+ L + Sbjct: 130 VNLSAGAKAAMENPDVVALFSEKLFGIIDLGRTAFGPHGSGFAEPIYFVLPILSILLQVL 189 Query: 504 QMKM-SPPPADKGQAMI---LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 Q M +P D Q + + +MP+VF + +FP+G ++YW S+++ +VQQ Sbjct: 190 QTVMATPRVQDPQQKAMTQAMMFMPLVFGYIAFTFPSGAVLYWVVSSLVGVVQQYF 245 >gi|134301155|ref|YP_001114651.1| 60 kDa inner membrane insertion protein [Desulfotomaculum reducens MI-1] gi|134053855|gb|ABO51826.1| protein translocase subunit yidC [Desulfotomaculum reducens MI-1] Length = 229 Score = 133 bits (333), Expect = 9e-29, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 26/229 (11%) Query: 336 WGWFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 +GWF I M LM++ Y ++ +AI+L T+F+K++ +PL+KKQ S M+ Sbjct: 2 FGWFDAIVDGMTALMNWLYGFTVSFGFPSYALAIILLTIFIKVVLYPLSKKQMHSMVMMQ 61 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI- 449 + P+I +++K+K PQ++Q+ +++LYK HN+NP+AGC P+L+Q+P+ A+Y+ + Sbjct: 62 KLAPEIKAIQDKYKNKDPQMMQQKIMELYKEHNVNPMAGCLPLLVQMPILIALYRALYAF 121 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + W++ L+ G +P ++ + + ++Q K++ Sbjct: 122 PFKNPDHAHFFWVESLSK---------TGDIP-----------LALLAAATTYLQSKLTT 161 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D+ Q +L MP+ + + PAGL +YW N + +QQ +I K Sbjct: 162 NTQDQTQKTMLYTMPLFIGWIAHTVPAGLALYWVVFNTVGAIQQWIINK 210 >gi|325965292|ref|YP_004243198.1| preprotein translocase subunit YidC [Arthrobacter phenanthrenivorans Sphe3] gi|323471379|gb|ADX75064.1| preprotein translocase subunit YidC [Arthrobacter phenanthrenivorans Sphe3] Length = 326 Score = 133 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 26/232 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQK 413 + ++I+ + ++ P+ KQ + M+ +QP + +L++K+K Q + + Sbjct: 37 WTWTLSIIGLVLVIRAALIPVFVKQIKAQRGMQLLQPDLKKLQDKYKGKTDQLSRQAMAQ 96 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKD--LAAADP 470 + +YK H NP + C P+L+Q+P FFA++ V+S S R G + + D Sbjct: 97 EQMAMYKKHGTNPFSACLPMLIQMPFFFALFTVLSGISTASRGGEGIGAMNHEQVVQFDQ 156 Query: 471 TNIFTLFGILPFY---------LPGFMHVGIWPIIMSLSMFIQMKMSPP----------P 511 + IF + ++ + + M+ S FI K P Sbjct: 157 STIFGAPLSATLLHGTPPGGNVVAVWILSILMILAMTASQFITQKQIMAKNMSEEAMASP 216 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + Q M+L +P+VF +FP G++IYW+ +N+ ++ QQ +++ Sbjct: 217 FMRQQKMMLYILPIVFGVGGINFPIGVLIYWTTTNLWTMGQQFFVIRRMPTP 268 >gi|126643002|ref|YP_001085986.1| inner membrane protein (IMP) integration factor [Acinetobacter baumannii ATCC 17978] gi|126388886|gb|ABO13384.1| Inner membrane protein (IMP) integration factor [Acinetobacter baumannii ATCC 17978] Length = 366 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 61/365 (16%), Positives = 125/365 (34%), Gaps = 36/365 (9%) Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNS 105 + V + A A A + ++ IN KG + L + SN Sbjct: 2 ASDVPQANIAQSQTTDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQ 61 Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVW---------------NLISGKIL 150 P V L + K Y A+ + ++ SG Sbjct: 62 PFVMLEND--AKRTYVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSE 119 Query: 151 TPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT- 209 T + + + Y + V N S + G++ R + Sbjct: 120 KVLTVPMVFKTPEGVEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDP 179 Query: 210 ---ATNTFGVQEGFIAVLGDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFI 264 + F + G + K+++ + ++ W+ + Y+ S +I Sbjct: 180 GKSSQGIFTLGTFLGGAWGTPDAHYNKLKFANFSEEKLN-TEAKGGWVAMVQHYFVSAWI 238 Query: 265 P-------SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317 P + + ++ + F++ I + G S+ L++G K Sbjct: 239 PGNLKLTQANGQPYVAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSE 298 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + +D+GW + IAK +F+ + +F+++VGN+G +I+L T+ VK++ +P Sbjct: 299 LKDLAV-----GLNQTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWP 353 Query: 378 LAKKQ 382 L++K Sbjct: 354 LSQKV 358 >gi|239826978|ref|YP_002949602.1| hypothetical protein GWCH70_1536 [Geobacillus sp. WCH70] gi|239807271|gb|ACS24336.1| 60 kDa inner membrane insertion protein [Geobacillus sp. WCH70] Length = 252 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 71/257 (27%), Positives = 124/257 (48%), Gaps = 27/257 (10%) Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + A + + P E YF+ +L+ + N+GIAI+ Sbjct: 1 MKKWIFALLGMVVLLSGCNRNAPIDEHSQGIWDHYFVYPMSKLLLMLGHLFGDNYGIAII 60 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTH 422 + T+ V+ PL KQY +T M+ ++P++ +L+EK+K + + LQK M+QLY+ H Sbjct: 61 VLTLIVRFCLLPLILKQYKTTIAMQKLRPELQKLQEKYKGNDIETQRKLQKEMMQLYQKH 120 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 I+P +GC P+ +Q+P+F A+Y IS + E++ + W++ L DP Sbjct: 121 GIHPASGCLPVFIQMPIFMALYYAISRTQEIKLHS-FLWVQ-LGHRDPYF---------- 168 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQAMILNWMPVVFVFALSSFPAGLI 539 I PI+ SL+ FI +++SP + AM+ MP++ +S P+ L Sbjct: 169 ---------ILPILASLATFISVRLSPSMTEQQMPQMAMMSYIMPIMIFIGANSVPSALS 219 Query: 540 IYWSWSNVISIVQQAVI 556 +YW SI+Q ++ Sbjct: 220 LYWVVGGCFSIIQSLIL 236 >gi|302393077|ref|YP_003828897.1| membrane protein insertase, YidC/Oxa1 family [Acetohalobium arabaticum DSM 5501] gi|302205154|gb|ADL13832.1| membrane protein insertase, YidC/Oxa1 family [Acetohalobium arabaticum DSM 5501] Length = 224 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 114/226 (50%), Gaps = 29/226 (12%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 F ++ M + +FY ++G++I+L T+ +++L FPL KQ S M+ +QPK+ Sbjct: 14 EMFGWLGGLMTGSLDFFYGFTNSYGLSIILLTLAIRVLLFPLVAKQTRSMKAMQELQPKM 73 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EL+E++ Q Q+ +++LY+ H +NP AGC P+L+Q+P+ A++ I ++ Sbjct: 74 EELKEEYGD-DQQQYQQKVMELYQEHKVNPAAGCLPLLVQMPILIALFHSIRGFEALKQT 132 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF----IQMKMSPPPA 512 + WI ++A D + I+ L MF +Q KMS Sbjct: 133 S-FLWISNIAQPD---------------------LVLVILTGLVMFGQSMVQQKMSGNAG 170 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ +MP++ V PA +++YW SN++ + QQ + + Sbjct: 171 GNN--KMMMFMPLLIVVIGFRLPAAVLLYWFTSNLVMVAQQYFLYR 214 >gi|119963653|ref|YP_949872.1| 60Kd inner membrane family protein [Arthrobacter aurescens TC1] gi|119950512|gb|ABM09423.1| putative 60Kd inner membrane family protein [Arthrobacter aurescens TC1] Length = 329 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 27/233 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQK 413 + ++I+ + ++ P+ KQ + M+ +QP + +L+ K+K Q + + Sbjct: 37 WTWTLSIIGLVLVIRAALIPVFVKQIKAQRGMQLLQPDLKKLQTKYKGKTDQLSRQAMAQ 96 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKD--LAAADP 470 + LYK H NP + C P+L+Q+P FFA+++V+S S + G + + D Sbjct: 97 EQMALYKKHGTNPFSACLPMLIQMPFFFALFQVLSGISTNAKQGQGVGAMSHEQVVQFDS 156 Query: 471 TNIFTLFGILPF----------YLPGFMHVGIWPIIMSLSMFIQMKMSPP---------- 510 ++IF + ++ + I M+ S FI K Sbjct: 157 SSIFGAPLSASLLHGDPSGGNSAVAVWVLSIVMIIAMTASQFITQKQIMAKNMSEEAMAS 216 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P + Q M+L +P+VF +FP G++IYW+ +N+ ++ QQ +++ Sbjct: 217 PFMRQQKMMLYILPLVFGIGGINFPIGVLIYWTTTNLWTMGQQFFVIRRMPTP 269 >gi|220914666|ref|YP_002489975.1| hypothetical protein Achl_3934 [Arthrobacter chlorophenolicus A6] gi|219861544|gb|ACL41886.1| 60 kDa inner membrane insertion protein [Arthrobacter chlorophenolicus A6] Length = 324 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 104/253 (41%), Gaps = 25/253 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 L+ + ++I+ + ++ P+ KQ + M+ +QP Sbjct: 15 VSIIMVGFHEGLTLIGMPAANGWTWTLSIIGLVLVIRAALIPVFVKQIKAQRGMQLLQPD 74 Query: 396 IDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + +L++K+K Q + + + +YK H NP + C P+L+Q+P FFA+++V+S Sbjct: 75 LKKLQDKYKGKTDQLSRQAMAQEQMAMYKKHGTNPFSACLPMLIQMPFFFALFQVLSGIS 134 Query: 452 EMRHAPFWGWIKD---LAAADPTNIFTLFGILPFY--------LPGFMHVGIWPIIMSLS 500 A + D ++IF ++ + + M+ S Sbjct: 135 NNAKAGQGVGAMSHDQVVQFDESSIFGAPLSASLLHGGGGGNQTAVWILSIVMILAMTAS 194 Query: 501 MFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 FI K P + Q M+L +P+VF +FP G++IYW+ +N+ ++ Sbjct: 195 QFITQKQIMAKNMSEEAMASPFMRQQKMMLYILPIVFGVGGINFPIGVLIYWTTTNLWTM 254 Query: 551 VQQAVIMKMHGAE 563 QQ +++ Sbjct: 255 GQQFFVIRRMPTP 267 >gi|311742159|ref|ZP_07715969.1| membrane protein OxaA [Aeromicrobium marinum DSM 15272] gi|311314652|gb|EFQ84559.1| membrane protein OxaA [Aeromicrobium marinum DSM 15272] Length = 328 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 23/259 (8%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYV 384 I M + + + L + I+ TV ++ L PL KQ Sbjct: 8 IGSLIMTPLYYAVSAVLLAWHWVFDNITFLSDGWVWTLSIVGLTVTIRALLIPLFVKQIK 67 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S+ NM+ +QPKI EL++K+ + L + ++L+K NP A C P+L Q+PVFFA++ Sbjct: 68 SSRNMQLLQPKIKELQKKY-GHDRERLTQEQMKLWKETGTNPFASCLPLLAQMPVFFALF 126 Query: 445 KVISISLEM------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF----MHVGIWP 494 + I + + R ++ + + IF F + I Sbjct: 127 RTIDQAAKAPADDLERGVRGLFNVEYVESLQGATIFGARIADTFINTDLTQTRVLTMILV 186 Query: 495 IIMSLSMFIQMKMSPPPADK----------GQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 I M + F+ + Q M+L +P VF FP G+++YW+ Sbjct: 187 IAMCATQFLTQRQLMAKNMPPDALNGPYAQQQKMLLYILPPVFAIGGIFFPLGVLVYWTT 246 Query: 545 SNVISIVQQAVIMKMHGAE 563 SN+ ++ QQ +++ + A Sbjct: 247 SNLWTMGQQFYVIRRNPAP 265 >gi|87311362|ref|ZP_01093483.1| 60 kDa inner-membrane protein-like [Blastopirellula marina DSM 3645] gi|87285942|gb|EAQ77855.1| 60 kDa inner-membrane protein-like [Blastopirellula marina DSM 3645] Length = 788 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 90/517 (17%), Positives = 184/517 (35%), Gaps = 54/517 (10%) Query: 86 GAQFDDLNL--RGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWN 143 G +DL L + + L + + IV + ++ Sbjct: 269 GKMINDLPLITKNWRLVENEDPTIVQFETLVTPEDLPQGVRFAKLRLVKTFQLPKKPTEA 328 Query: 144 LISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIM 203 L N + +N I + R + Sbjct: 329 NAESNYQPYGLKYSLQVFNDGTEPVDAAFRQFGATGLPTEGWWYSNKIARGWGGAGLRDV 388 Query: 204 RHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVF 263 + IA + + + + G+ Y++S Sbjct: 389 VWESSKGDYDMFTVAKIIA-----KAQDLESDRQISMFKVDDQIKPKFAGVDAVYFSSAM 443 Query: 264 IPSKETSFHSQFK-----------YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGA 312 + ++ + + A E K + +F+G Sbjct: 444 VFNESDKGPALSRGAAIVAAVVDEEQKQRTDCTYRLDGATETIEPGDKPFELSCTIFSGP 503 Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFV 371 K+ + HY + L +GWF++++ + ++ + ++ + +G+ I+ T+ V Sbjct: 504 KKEELLAHY-------GLQNLEYYGWFHYVSTALLFVLHFMHDYLYIPYGLGIIFLTLMV 556 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 + FPL++KQ + + + P++ ++ E +K+ P + ++A +L+ +N NPL GC Sbjct: 557 RGCLFPLSRKQARNMLIQQQLAPEMKKISEMYKEDPIK-QRQAQQELFTKYNFNPLGGCG 615 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWG---WIKDLAAADPTNIFTLFGILP------- 481 + LQ+P+F +Y+ +++ +++R APF W +L+A D + G+LP Sbjct: 616 VMFLQLPIFLGLYRALAVDIQLRQAPFIPGIEWCSNLSAPDQAWYW--VGVLPDFMTIHP 673 Query: 482 --FYLPGFMHVG----IWPIIMSLSMFIQMKMSPPPA----DKGQAMILNWMPVVFVFAL 531 + F+ +G I P+ +Q KM PPA K Q ++ +M V F Sbjct: 674 SASFPASFLFLGPYLNILPLFTIALFLVQQKMFMPPAVDEQQKMQQQMMTYMMVFIGFMF 733 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 P+GL IY+ +V I+ + + L D Sbjct: 734 FRVPSGLCIYFITQSVWGIL-----ERKLIPKPQLAD 765 Score = 38.0 bits (86), Expect = 4.1, Method: Composition-based stats. Identities = 15/126 (11%), Positives = 25/126 (19%), Gaps = 27/126 (21%) Query: 1 MERNWNYFVAIALSVIIVYAWQN------FYVYPRIEEMNNERKNIQTVKQPNQVDNSYA 54 ME ++V ++ +Q + E QP Sbjct: 1 ME--RRVIAFSLIAVAMLMTFQMLGRRNQDAQPENPDAEQAEVAEKGDQPQPGDAGGDQP 58 Query: 55 AVLIDDRAQA----------LSMSPRVEL------KNPSLIGSINLKGAQFDDLNLR--G 96 I A V L L + + +G + L Sbjct: 59 NPEIKPADDAENEDEEVKEEPQPRKFVTLGSVSSADADML-VTFDTRGGSVARIELPADK 117 Query: 97 YHLDVS 102 Y Sbjct: 118 YKSLED 123 >gi|83591337|ref|YP_431346.1| protein translocase subunit yidC [Moorella thermoacetica ATCC 39073] gi|83574251|gb|ABC20803.1| protein translocase subunit yidC [Moorella thermoacetica ATCC 39073] Length = 225 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 64/224 (28%), Positives = 121/224 (54%), Gaps = 33/224 (14%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + N+G+AI+L T+ VK++ +PL +Q S ++ +QPKI EL++K+ +S PQ Q+AM+ Sbjct: 24 IPNYGLAIILFTIAVKVILYPLTYRQLRSMRRLQELQPKIQELQKKY-KSNPQKAQQAMM 82 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--------SLEMRHAPFWGWIKDLAAA 468 +LY+ +NPL GC P+L+Q+P+ +A++ + ++ + HA + WI +L Sbjct: 83 ELYQKEKVNPLGGCLPLLIQMPILYALFTSLRSFFNPALNPTVNLAHA-NFLWISNLGQP 141 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--ADKGQAMILNWMPVV 526 DP I P+++++ F Q K+S D+ Q +L MP++ Sbjct: 142 DPY--------------------ILPVLVAVGTFFQQKVSMVSGGQDQTQKTMLFVMPLI 181 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM-HGAEIGLIDR 569 + +F AGL +YW +++ I++Q + + H + + + Sbjct: 182 IGWMSRNFSAGLSLYWVTFSLMGILEQWLARRQPHLVKEEISAK 225 >gi|229007352|ref|ZP_04164950.1| Membrane protein oxaA 2 [Bacillus mycoides Rock1-4] gi|228753883|gb|EEM03323.1| Membrane protein oxaA 2 [Bacillus mycoides Rock1-4] Length = 260 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 126/244 (51%), Gaps = 33/244 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ +++ + + V +FGIAI++ T+ V+ PLA QY S MK +QP+ Sbjct: 37 WDHYFVYPISLMLQFVAHHVPGGSFGIAIIIITLLVRSAMIPLAVSQYRSQMKMKKMQPQ 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L+EK + QK M +L KT NPLAGC P+L+Q+P+F A+Y IS + Sbjct: 97 MQKLKEKHGDVSKDIEKQKQYQKEMSELMKTGGWNPLAGCLPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E+R + W+ +L ADP + I PI+ +L+ FIQMK+ Sbjct: 157 EEIR-TSSFLWV-NLGHADPYH-------------------ILPILAALATFIQMKVMQS 195 Query: 511 PADKGQAMILN-----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 G+ + + MP + +F + P+GL++YW N+ +++Q V+ K+ E G Sbjct: 196 NVTPGEQVQMLKVQQFMMPAMILFMGFAAPSGLVLYWITGNIFTMLQTIVLRKVMDREEG 255 Query: 566 LIDR 569 + Sbjct: 256 KLQN 259 >gi|212639373|ref|YP_002315893.1| stage III sporulation protein J essential for sigma-G activity [Anoxybacillus flavithermus WK1] gi|212560853|gb|ACJ33908.1| Stage III sporulation protein J essential for sigma-G activity [Anoxybacillus flavithermus WK1] Length = 260 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 128/269 (47%), Gaps = 29/269 (10%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 + + F + + +P E YF+ +L+ + N+G+AI Sbjct: 10 SYIVKKWTILFFVLLLSACNRNVPITEHSQGVWDHYFVYPMSKLLLMLGHAFQENYGLAI 69 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKT 421 + T+ V+ PL KQ+ + M+ I+P++ +L++K+K + + LQ+ M+QLY+ Sbjct: 70 VALTIVVRFGLLPLMIKQFRTNIVMQRIRPEMQKLQQKYKGTDMETQRKLQQEMMQLYQK 129 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 H +NP++GC PI +Q+P+F A+Y IS + E++ + W++ L DP Sbjct: 130 HGVNPMSGCLPIFIQMPIFMALYYAISRTEEIKLHS-FLWMQ-LGHRDPYF--------- 178 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---KGQAMIL-NWMPVVFVFALSSFPAG 537 I PI+ SL+ FI M++SP Q I+ MPV+ SS P+ Sbjct: 179 ----------IMPILASLTTFISMRLSPSATTTEVATQMKIMSYIMPVMIFMGASSVPSA 228 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 L +YW SI+Q ++M+ + + Sbjct: 229 LSLYWVVGGCFSIIQS-LVMRAQWKKHQV 256 >gi|23100949|ref|NP_694416.1| stage III sporulation protein J [Oceanobacillus iheyensis HTE831] gi|38503017|sp|Q8EKU1|OXAA_OCEIH RecName: Full=Membrane protein oxaA; Flags: Precursor gi|22779184|dbj|BAC15450.1| stage III sporulation protein J [Oceanobacillus iheyensis HTE831] Length = 252 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 68/271 (25%), Positives = 118/271 (43%), Gaps = 35/271 (12%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 + T+ ++ P F+ +++ + +G+AI Sbjct: 4 KFGIIVALIALTTLLSGCTEINEPITPNSDGIWNTIFVYPVSWLITNVAGVFNEGYGLAI 63 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKT 421 ++ T+FV+LL PL KQ S+ M+ IQPK+ E+++K+ Q LQ+ ++L++ Sbjct: 64 IIVTLFVRLLLMPLNVKQIKSSKAMQEIQPKLQEIQKKYTSKDANTQQKLQQETMELFQK 123 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 + +NPLAGC PIL+Q+P+F A+Y I + E+ + W + L + D Sbjct: 124 NGVNPLAGCLPILVQMPIFVAMYHAIMRTPEI-STHSFLWFQ-LGSPD------------ 169 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--------QAMILNW-MPVVFVFALS 532 I PI+ L F+Q K+ Q I+ + MP++ Sbjct: 170 ---------YILPILTGLFTFLQQKLMMSTNTSMNSNPQMKLQMQIMLYVMPIMIGVMAF 220 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FPA L +YW N+ + Q +I K A+ Sbjct: 221 FFPAALALYWVTGNIFMVFQTLLINKPMMAK 251 >gi|313893458|ref|ZP_07827028.1| stage III sporulation protein J [Veillonella sp. oral taxon 158 str. F0412] gi|313441901|gb|EFR60323.1| stage III sporulation protein J [Veillonella sp. oral taxon 158 str. F0412] Length = 222 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 24/211 (11%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 ++G+AI+L T+F+K + PL KQ S M+ +QP++ EL+ K+K P LQ M Sbjct: 31 YPSYGVAIILLTIFIKAILAPLTVKQIKSMKAMQELQPRMQELQNKYKNDPA-RLQAEMG 89 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYK +NPLAGC P+L+Q+P AI+ + ++ + W+ L DP Sbjct: 90 ALYKEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYDQNYVQFLWLPSLGEPDPMY---- 145 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILN-WMPVVFVFALS 532 I P++ + S +I K + A Q I+ +MP+ + Sbjct: 146 ---------------ILPVLSAASTWIMSKQTGSGATGAAAQQQKIMTIFMPLFIGYISL 190 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +FP+GL+IYW SNV VQQ I K A+ Sbjct: 191 NFPSGLVIYWIVSNVFQFVQQHFIYKGLEAK 221 >gi|315644292|ref|ZP_07897462.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus vortex V453] gi|315280667|gb|EFU43956.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus vortex V453] Length = 296 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 56/228 (24%), Positives = 113/228 (49%), Gaps = 26/228 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + L ++ G +G+++++ + V+ L PL KQ S+ M+ IQP+I + Sbjct: 48 SNVVYYFTLALDTFATWFNGEYGLSVLVMVLIVRTLILPLTLKQVRSSKAMQAIQPEIQK 107 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +REK+K P + +Q ++L++ + +NP+AGC P+++Q+P+F A+Y I + +R Sbjct: 108 IREKYKDQPEK-VQMETMKLFQENKVNPMAGCLPLIVQMPIFIALYHSIYYNNLLRD-HE 165 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W++ L D I P++ +++ ++Q KM Q Sbjct: 166 FLWLQ-LGQPDKLF-------------------ILPVLAAITTYLQTKMMMKMNPSPQMG 205 Query: 519 ILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ +M P++ FP+ L +YW +SN+ +IVQ + + + Sbjct: 206 MMQFMLFVYPILIFVMSFQFPSALPLYWFYSNLYTIVQNYFLYRNNDK 253 >gi|297563780|ref|YP_003682754.1| membrane protein insertase, YidC/Oxa1 family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848228|gb|ADH70248.1| membrane protein insertase, YidC/Oxa1 family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 314 Score = 132 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 22/272 (8%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + GW + + +G++I+L TV ++LL PL KQ + M+ Sbjct: 4 WLYNIVGWILVQIHSGLTYIGLDTDSGWAWGLSIVLLTVLMRLLLVPLFVKQMNTQRKMQ 63 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-- 448 +IQPKI +LRE++ + + LQ+ ++LY+ NP+ GC P+LLQ+PVFFA++ V+ Sbjct: 64 DIQPKILKLRERY-KHDKERLQRESMKLYQESGTNPIMGCLPLLLQMPVFFALFSVLRSV 122 Query: 449 -----------ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 +E A A + T L + + + I +IM Sbjct: 123 AEGNAQYNFTPELVESARAALIFEAPVAAQFNSTPEELLALGASDPIMAKVIIAIACVIM 182 Query: 498 SLSMFIQMKMSP------PPADKGQA--MILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 + F+ M+ S P + I+ +M +F P G+++YW SNV + Sbjct: 183 GTTTFLTMRQSMKRSVSQMPDNPMMQTQKIMMYMAPLFGLFGLMMPVGVLVYWVTSNVWT 242 Query: 550 IVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + QQ + A + +S S N +++ Sbjct: 243 MGQQHFLYSRQPAPGQDEAKAKSGASANGSAK 274 >gi|332800544|ref|YP_004462043.1| membrane protein insertase, YidC/Oxa1 family [Tepidanaerobacter sp. Re1] gi|332698279|gb|AEE92736.1| membrane protein insertase, YidC/Oxa1 family [Tepidanaerobacter sp. Re1] Length = 209 Score = 132 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 23/228 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ M LM + ++GIAI+L TV +KL+ P + Q S M+ I P E Sbjct: 1 MAFLQDLMKQLMDLIFVYTNSYGIAIILLTVLIKLILLPFSFMQINSMKKMQEITPLQQE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L++K+K + L +++LY+ + INP+ GC P+L+Q PV A+++V + + A Sbjct: 61 LQKKYKNDKEK-LNMEIMKLYQENKINPMGGCLPLLIQFPVIIALFRVFQ-TYDFAGAS- 117 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-SPPPADKGQA 517 + WI +L+ D T I PI+ +++ +IQ K+ +P AD A Sbjct: 118 FLWISNLSKPDSTF-------------------ILPILAAVTTYIQTKLSTPAGADNPNA 158 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + MP++ + F AGL +YW SNV+ IVQQ + + Sbjct: 159 SMNIIMPLMIGWFSVKFAAGLALYWVVSNVVQIVQQLIFARPQAIAKE 206 >gi|220913496|ref|YP_002488805.1| hypothetical protein Achl_2751 [Arthrobacter chlorophenolicus A6] gi|219860374|gb|ACL40716.1| 60 kDa inner membrane insertion protein [Arthrobacter chlorophenolicus A6] Length = 266 Score = 132 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 99/247 (40%), Gaps = 23/247 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + +AI+ + V+ P+ Q + M+ +QP Sbjct: 19 MSAVLVAFHNGLAALGLPSDGGWTWTLAIIGLVLVVRAALIPVFLAQVRAQRRMRQLQPD 78 Query: 396 IDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + L+EK+ Q + + + LY+ H NP + C P+L+Q P F +++V++ Sbjct: 79 LKALQEKYAGRTDQQSRQAMAQEQMALYRKHGTNPFSACLPLLIQAPFFLGLFQVLAGIP 138 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFY---------LPGFMHVGIWPIIMSLSMF 502 + A A+ N T+FG + ++M+ F Sbjct: 139 DAVGRGTGIGAMAAAQAEQFNSATIFGAPLSASLLHGGGDPAAVAVLALAMILVMTACQF 198 Query: 503 IQMKMS----------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + K+ P P + Q IL +P+VF + FP G+++YW+ SN+ ++ Q Sbjct: 199 LTQKLVTARTALGPDVPAPLLRQQRAILVALPLVFAAGGAFFPIGVLVYWTVSNLWTLGQ 258 Query: 553 QAVIMKM 559 Q ++ + Sbjct: 259 QYLVTRK 265 >gi|223973321|gb|ACN30848.1| unknown [Zea mays] Length = 297 Score = 132 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 53/216 (24%), Positives = 102/216 (47%), Gaps = 22/216 (10%) Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+N+QP++ +++++ + + +Q +LY+ +NPLAGC+P L IPV+ +Y+ Sbjct: 1 MAMQNLQPQLKAIQQRYAGN-QERIQLETARLYRQAGVNPLAGCFPTLATIPVWIGLYQA 59 Query: 447 ISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF-----------MHVGIWP 494 +S + E + WI L + + P + + P Sbjct: 60 LSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWYDTICYLVLP 119 Query: 495 IIMSLSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 +++ S ++ M++ PP D Q +L ++P + + S P+GL IYW +NV+S Sbjct: 120 VLLVASQYVSMEIMKPPQSDDPSQKNTLLVLKFLPFMIGYFSLSVPSGLSIYWFTNNVLS 179 Query: 550 IVQQAVIMKMHGAEIGLID----RLRSTFSKNYNSQ 581 QQ + KM GA+ + + + + +K N+Q Sbjct: 180 TAQQVWLRKMGGAKPVVSEGDRRIITAGRAKRSNAQ 215 >gi|304405892|ref|ZP_07387550.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus curdlanolyticus YK9] gi|304345135|gb|EFM10971.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus curdlanolyticus YK9] Length = 258 Score = 132 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 25/229 (10%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + +L ++ G +G++I+L T+ V+ L PL KQY S+ M+ IQP++++L Sbjct: 47 NVVYWFALVLDTFAKWFGGEYGLSILLLTIIVRTLILPLTLKQYRSSKAMQAIQPELEQL 106 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 R+K K +P Q+LQ+ ++L++ +++NP+AGC P+++Q+PVF A+Y I ++ +R + Sbjct: 107 RKKHKDNP-QLLQQETMKLFQQNSVNPMAGCLPMIVQMPVFIALYNAIYMNSAIR-EHQF 164 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQ 516 W++ L DP + I PII +++ F+Q KM G Sbjct: 165 LWLE-LGQKDPYH-------------------ILPIIAAITTFVQTKMMQSQQKTTMPGM 204 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 +L PV+ SFPA L +YW +SN+ +IVQ + Sbjct: 205 QAMLLIFPVMIFVMALSFPAALPLYWIFSNLYTIVQNYFLYVRPSKRKE 253 >gi|310779691|ref|YP_003968024.1| protein translocase subunit yidC [Ilyobacter polytropus DSM 2926] gi|309749014|gb|ADO83676.1| protein translocase subunit yidC [Ilyobacter polytropus DSM 2926] Length = 208 Score = 132 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 71/225 (31%), Positives = 115/225 (51%), Gaps = 25/225 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FI P+ ++ Y Y ++GNFG++I+ TV +KLL PL KQ S MK IQP+ID+ Sbjct: 1 MSFITVPLEQIILYLYKIIGNFGLSIIGITVLIKLLLLPLTLKQDKSMKAMKRIQPEIDK 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH--- 455 ++EK+K Q+L + ++LY+ + +NP AGC P+L+Q+P+ +A++ V+ + Sbjct: 61 IKEKYKNDK-QLLNEKTMELYQKYKVNPAAGCLPMLVQLPILWALFAVLRKAPVDGGIVP 119 Query: 456 -APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + W+ L DP I P++ L F Q K+ ++ Sbjct: 120 VESTFLWLT-LVNPDPLY-------------------ILPVLNGLVAFAQQKIMGSGSNP 159 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ P++ VF PAGL IYW S+ I+QQ +MK Sbjct: 160 QMKNMMYMFPIMMVFISYKMPAGLQIYWLTSSAAGILQQYYVMKR 204 >gi|227496609|ref|ZP_03926887.1| inner membrane protein translocase protein [Actinomyces urogenitalis DSM 15434] gi|226833889|gb|EEH66272.1| inner membrane protein translocase protein [Actinomyces urogenitalis DSM 15434] Length = 387 Score = 132 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 27/231 (11%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAM 415 + ++I+ T+FV+LL PL KQ ++ M+ +QP++ L+ K+K Q Q+ M Sbjct: 36 WVLSIVGLTIFVRLLIMPLFVKQIRASRGMQLMQPELQALQAKYKGKTDPASRQRQQEEM 95 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW--IKDLAAA--DPT 471 + LY+ H NP + C PIL+Q+PVFFA+++V++ + + I L A + Sbjct: 96 MALYRKHGTNPFSSCMPILVQMPVFFALFRVLASLQAVATGTYANHDSIGPLTAQLAEDV 155 Query: 472 NIFTLFG-------ILPFYLPGFMHVGIWPIIMSLSMFIQM-KMSPPPA--------DKG 515 TLFG + + + I I MS+S + M +++ + Sbjct: 156 QASTLFGAHLSESFMNSSDVTTKVVTVIMIIAMSVSQWYTMAQLTMKNMPESSKNSDNPM 215 Query: 516 ---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q M++ MP+ F F F G+++YW +N+ ++ QQ + ++ A Sbjct: 216 MRSQRMMMTIMPIFFAFTGVQFQIGVLVYWVTTNLWTMGQQFLTIRNMPAP 266 >gi|219112651|ref|XP_002178077.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410962|gb|EEC50891.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 425 Score = 132 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 22/247 (8%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + L+ ++G+AI+L T+ +K++ FPL K Q ST M+ +QP Sbjct: 100 TIPIKLLLQAIHSLLLTVGLNTNSWGVAIVLLTILIKVVTFPLTKTQLESTNKMQAMQPA 159 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 I EL+ K++ +P + + + + Y+T+ INPLAGC P ++QIPVF +Y+ + LE+ Sbjct: 160 IKELQAKYQSNPEVM-NQKIAEFYQTNEINPLAGCLPSIVQIPVFIGLYRAV---LELAQ 215 Query: 456 A----PFWGWIKDL----------AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A + ++ +L +AAD G+ P + I P+ + +S Sbjct: 216 ANKLDESFLFLPNLEGPTYGAEPGSAADWILKGWTDGVPSLGWPDTIAFLILPVFLVISQ 275 Query: 502 FIQMK-MSPPPADKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ M+ M P D Q IL +P++ + S PA L +YW +N+I+ +I Sbjct: 276 YLSMELMQPKTDDPAQQQSNAILKVLPIMIGWFSLSVPAALSVYWVINNIITTGTSLIIR 335 Query: 558 KMHGAEI 564 E Sbjct: 336 NSMSVET 342 >gi|227902597|ref|ZP_04020402.1| stage III sporulation protein J [Lactobacillus acidophilus ATCC 4796] gi|227869686|gb|EEJ77107.1| stage III sporulation protein J [Lactobacillus acidophilus ATCC 4796] Length = 298 Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 21/264 (7%) Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 P +W + + ++ + ++G AI++ T+ V+++ PL Sbjct: 39 QGANGQVTPVSHTSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIVRVILLPLN 98 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQ 436 ST M++IQP+I+ELR+K+ + Q+ +LYK +NP GC P+++Q Sbjct: 99 AISIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVIIQ 158 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 +PV +A+Y I + ++ + W+ DL+ DP I + + + Sbjct: 159 LPVMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAM---------------VF 201 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 LS +I +P + G ++ + M ++ +F + + +YW SN+ VQ + Sbjct: 202 TFLSTYISQLSTPKSSQNGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQAVQTFI 261 Query: 556 IMKMHGAEIGLIDRLRSTFSKNYN 579 + + + + Sbjct: 262 LQNPIKYRKEQEAKNEAERERKRK 285 >gi|228999798|ref|ZP_04159371.1| Membrane protein oxaA 2 [Bacillus mycoides Rock3-17] gi|228759947|gb|EEM08920.1| Membrane protein oxaA 2 [Bacillus mycoides Rock3-17] Length = 260 Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 126/244 (51%), Gaps = 33/244 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ +++ + + V +FGIAI++ T+ V+ PLA QY S MK +QP+ Sbjct: 37 WDHYFVYPISLMLQFVAHHVPGGSFGIAIIIITLLVRSAMIPLAVSQYRSQMKMKKMQPQ 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L+EK + QK M +L KT NPLAGC P+L+Q+P+F A+Y IS + Sbjct: 97 MQKLKEKHGDVSKDIEKQKQYQKEMSELMKTGGWNPLAGCLPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E+R + W+ +L ADP + I PI+ +L+ FIQMK+ Sbjct: 157 EEIR-TSSFLWV-NLGHADPYH-------------------ILPILAALATFIQMKVMQS 195 Query: 511 PADKGQAMILN-----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 G+ + + MP + +F + P+GL++YW N+ +++Q V+ K+ E G Sbjct: 196 NVTPGEQVQMLKVQQFMMPAMILFMGFAAPSGLVLYWITGNIFTMLQTIVLRKVMDREEG 255 Query: 566 LIDR 569 + Sbjct: 256 QLQN 259 >gi|325284198|ref|YP_004256739.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus proteolyticus MRP] gi|324316007|gb|ADY27122.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus proteolyticus MRP] Length = 576 Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats. Identities = 91/499 (18%), Positives = 161/499 (32%), Gaps = 65/499 (13%) Query: 75 NPSLIGSINLKGAQFDDLNLRGY------HLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 N KG + ++ Y + L + N + Sbjct: 103 TNLADIVFNNKG-EIIGWYVKNYAGSPYIKENADGTYDFTALQNERGIINLVNGPALQIQ 161 Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTN 188 N +S T ++ + + +YL + T Sbjct: 162 AENLDPKAPVTAQEPQLSNNGETNEQVAVFRYEQGGVPVTKTVTIHTRNYLINVK-TEVG 220 Query: 189 NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHES 248 + G P+ + + G ++ +Y+ ++ + Sbjct: 221 GGTQNYQMLLPGLGNDGNPRVRALPQVGEVATVQGAGVTTVENIRYAAMQHVPPNQMSP- 279 Query: 249 NSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL 308 + E + +A S N + G + Sbjct: 280 -------------AILVRPEGGTRVDAQMTGGSNALLTLGLSGNSSVDVYGGRNELIH-- 324 Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 K + D WF I+ + LM + LVG++GI I+L Sbjct: 325 -------------LKQTGFYGMPGVFDPNWFGHISLAIVSLMELLHRLVGDWGIVILLIA 371 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNI 424 V ++L+ +P+ + Q +TA M+ +QPK+ E+++++K + + +Q M LYK HN Sbjct: 372 VLLRLVMWPVMQAQARTTAKMQVLQPKMKEIQDRYKDAKDLESQRAMQMEMAALYKEHNF 431 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NP GC L +PV A++ I E + W+ DLA DP I ++ Sbjct: 432 NPA-GCLSSFLPLPVLIALWSTIRN-FEF--DSGFLWMPDLAIPDPLWILPALYLIVNMG 487 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 ++ P MF Q +M + FV+ FPAG+ IY Sbjct: 488 QLWVSTRRTP-----EMFKQQ---------------AFMYLFFVYFALIFPAGVSIYLII 527 Query: 545 SNVISIVQQAVIMKMHGAE 563 S I I+QQ ++ K E Sbjct: 528 STAIGILQQFIVNKQVEVE 546 >gi|269122891|ref|YP_003305468.1| 60 kDa inner membrane insertion protein [Streptobacillus moniliformis DSM 12112] gi|268314217|gb|ACZ00591.1| 60 kDa inner membrane insertion protein [Streptobacillus moniliformis DSM 12112] Length = 224 Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 21/228 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 ++ L+ Y VGN+GIAI++TT V+LL PL KQ S M+ IQP ++ Sbjct: 8 PKWLVDAAVKLLDLIYGFVGNYGIAIIVTTFLVRLLLLPLTLKQEKSMKRMREIQPMLEA 67 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++EK+K Q+ + ++LY+ +NP GC P+L+Q+PVF A+Y + + Sbjct: 68 IKEKYKDDK-QMQNQKTMELYQQEKVNPAGGCLPLLIQLPVFVALYHAF-TTNALPENAT 125 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DK 514 + W +L+ D F + I P++ ++ FIQ K+ D Sbjct: 126 FLWF-NLSKPDALFTLQGF-----------SINILPLLTTVLTFIQQKLMQAKTQGSNDP 173 Query: 515 G---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ MP++ + P+GL +Y+ + ++S++QQ +M Sbjct: 174 MAGSMQTMMYTMPILMLLIFYKMPSGLNLYYFVNTLLSVLQQVYVMNR 221 >gi|227550637|ref|ZP_03980686.1| stage III sporulation protein J precursor [Enterococcus faecium TX1330] gi|257888098|ref|ZP_05667751.1| inner membrane protein [Enterococcus faecium 1,141,733] gi|257896284|ref|ZP_05675937.1| inner membrane protein [Enterococcus faecium Com12] gi|257899268|ref|ZP_05678921.1| inner membrane protein [Enterococcus faecium Com15] gi|293379365|ref|ZP_06625509.1| putative stage III sporulation protein J [Enterococcus faecium PC4.1] gi|227180238|gb|EEI61210.1| stage III sporulation protein J precursor [Enterococcus faecium TX1330] gi|257824152|gb|EEV51084.1| inner membrane protein [Enterococcus faecium 1,141,733] gi|257832849|gb|EEV59270.1| inner membrane protein [Enterococcus faecium Com12] gi|257837180|gb|EEV62254.1| inner membrane protein [Enterococcus faecium Com15] gi|292641888|gb|EFF60054.1| putative stage III sporulation protein J [Enterococcus faecium PC4.1] Length = 272 Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats. Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 27/226 (11%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQK 413 GN GI I+L T+ ++++ PL Q S + +QPK+ L++++ P+ L++ Sbjct: 53 FGNAGIGIILFTLIIRVILLPLMHFQTKSMRKTQELQPKLKALQQQYSSRDPETQSKLRE 112 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 +LY + +NP AGC P+L+Q+P+ A+++ IS E++ + W+ +L ADPT Sbjct: 113 EQQRLYAENGVNPYAGCLPLLVQMPILMALWQSISRVPELKQ-GHFLWL-NLGNADPTF- 169 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNW-MPVVFVFA 530 I PI+ ++ F +S I+N+ MPV+ + Sbjct: 170 ------------------ILPILAAIFTFASTYLSSMSQIESNASMKIMNFVMPVMILVM 211 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + +GL +YW SN +VQ +I + R + Sbjct: 212 GVNLASGLSLYWVVSNAFQVVQTLLINNPFKIRKEREEEARKIRER 257 >gi|260904985|ref|ZP_05913307.1| 60 kDa inner membrane insertion protein [Brevibacterium linens BL2] Length = 319 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 23/247 (9%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK---- 413 + ++I T+ ++ + PL Q S M+ +QP+I L+ K+K Q ++ Sbjct: 37 WTWVLSIAGLTLVIRAVLIPLFVYQIKSQRKMQLLQPEIQRLQAKYKGKKDQYSRQAMAE 96 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP---FWGWIKDLA-AAD 469 + L++ + +P A C P+L+Q+P+FF++++VI ++ G+ ++LA A+ Sbjct: 97 EQMNLFRDNKTSPWASCLPLLVQMPIFFSLFRVIHNMPDVASGSVGAIGGFTQELAIQAE 156 Query: 470 PTNIFTLFGILPFY---LPGFMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQ 516 +++F + F + + G+ +IM+ +MFI K P + Q Sbjct: 157 QSSVFGISLSATFMSDGIGVKLLTGVLIVIMASTMFITQKQMMAKNMSESAMANPMMQSQ 216 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE--IGLIDRLRSTF 574 M+L MP+VF FP G++ YW SN ++ QQ V+++ A + L Sbjct: 217 KMLLYVMPLVFGIGGIYFPLGVLFYWLVSNTWTMCQQHVVIRNMPAPGSKAEKEMLERKA 276 Query: 575 SKNYNSQ 581 K Q Sbjct: 277 RKGKPVQ 283 >gi|315925607|ref|ZP_07921817.1| stage III sporulation protein J [Pseudoramibacter alactolyticus ATCC 23263] gi|315621148|gb|EFV01119.1| stage III sporulation protein J [Pseudoramibacter alactolyticus ATCC 23263] Length = 296 Score = 131 bits (328), Expect = 4e-28, Method: Composition-based stats. Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 39/245 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + ++ YNLV ++G A++L T+ VK + PL KQ S M+ +QP+++ Sbjct: 1 MNILYQAFGFVLYQIYNLVKDYGFAVILFTIIVKTIILPLNIKQTNSMREMQAVQPELNN 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL------- 451 L++K+K +P + L ++LYK +N+NP+AGC P+L+Q+P+ + ++ + Sbjct: 61 LQKKYKNNPEK-LNAETMKLYKLYNVNPMAGCLPLLIQLPIIWGLFGALRSPAKYVFTNG 119 Query: 452 ---EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 +R + WI +L DP + PI+ + FI Sbjct: 120 NLSALR--AGFYWIPNLGKPDPYF-------------------VLPILCVVLTFITQWYM 158 Query: 509 P-------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 A Q ++L MP++ + PAG+ +YW N + VQQ ++M+ Sbjct: 159 MRFQDDGNKAAQSSQKVMLYVMPLMIGWFAVKMPAGVALYWVVQNAYTFVQQFLVMRKPV 218 Query: 562 AEIGL 566 ++ + Sbjct: 219 EKVSI 223 >gi|293572715|ref|ZP_06683679.1| membrane protein OxaA 1 [Enterococcus faecium E980] gi|291607207|gb|EFF36565.1| membrane protein OxaA 1 [Enterococcus faecium E980] Length = 272 Score = 131 bits (328), Expect = 4e-28, Method: Composition-based stats. Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 27/226 (11%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQK 413 GN GI I+L T+ ++++ PL Q S + +QPK+ L++++ P+ L++ Sbjct: 53 FGNAGIGIILFTLIIRVILLPLMHFQTKSMRKTQELQPKLKALQQQYSSRDPETQSKLRE 112 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 +LY + +NP AGC P+L+Q+P+ A+++ IS E++ + W+ +L ADPT Sbjct: 113 EQQRLYAENGVNPYAGCLPLLVQMPILMALWQSISRVPELKQ-GHFLWL-NLGNADPTF- 169 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNW-MPVVFVFA 530 I PI+ ++ F +S I+N+ MPV+ + Sbjct: 170 ------------------ILPILAAIFTFASTYLSSMSQIESNASMKIMNFVMPVMILVM 211 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + +GL +YW SN +VQ +I + R + Sbjct: 212 GVNLASGLSLYWVVSNAFQVVQTLLINNPFKIRKEREEEARKIRER 257 >gi|302798427|ref|XP_002980973.1| hypothetical protein SELMODRAFT_12954 [Selaginella moellendorffii] gi|300151027|gb|EFJ17674.1| hypothetical protein SELMODRAFT_12954 [Selaginella moellendorffii] Length = 313 Score = 131 bits (328), Expect = 4e-28, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 121/262 (46%), Gaps = 30/262 (11%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYN------LVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 WF + M ++ + + +G AI+L TV VK+L FPL K Q S Sbjct: 31 QAQQSDWFSGVTTVMEAVLKVLKDGLTTLKVPYAYGFAIILLTVLVKVLTFPLTKSQAES 90 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 T +M+N+QPK+ +++++ + +Q +LYK +NPLAGC P L +PV+ +Y+ Sbjct: 91 TISMQNLQPKLKAIQQRYAG-DQERIQMETARLYKQAGVNPLAGCLPTLATLPVWIGLYR 149 Query: 446 VISI-SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIW 493 +S + E + + WI LA + I LF G P + + Sbjct: 150 ALSNVANEGLLSEGFFWIPSLAGPTTIAARQSGSGISWLFPFVDGHPPLGWGDTIAYLVL 209 Query: 494 PIIMSLSMFI-QMKMSPPPADKGQAM---ILNWMPVVFVFALSSFPAGLIIYWS-----W 544 P+++ S + M PP D Q IL ++P++ + S P+GL +YW Sbjct: 210 PVLLIGSQYASMQIMQPPQTDPSQKNTQLILKFLPLMIGYFALSVPSGLSLYWLSTENRV 269 Query: 545 SN--VISIVQQAVIMKMHGAEI 564 +N ++S QQ + K+ G + Sbjct: 270 ANKHILSTGQQVWLRKLGGRKP 291 >gi|253573861|ref|ZP_04851203.1| inner membrane insertion protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251846338|gb|EES74344.1| inner membrane insertion protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 280 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 64/228 (28%), Positives = 113/228 (49%), Gaps = 26/228 (11%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W + L ++ G +GIAI++ + V+ L PL KQ S+ M+ IQP+ Sbjct: 28 WWTSNVVYYFSLALDTFAEWFNGAYGIAILIMVLIVRTLILPLTLKQVKSSKAMQAIQPQ 87 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + ++RE++K +P + Q+ ++L++ H +NP+AGC+P+L+Q+PVF A+Y I + +R Sbjct: 88 LQKIREQYKDNPEK-QQQETMKLFQEHKVNPMAGCFPLLIQMPVFIALYNSIYYNSAIR- 145 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM----SPPP 511 + W++ L D I P I +++ FIQ KM +P Sbjct: 146 EHSFLWLQ-LGEPDKLF-------------------ILPAIAAITTFIQTKMMSSMNPQG 185 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 A ++ P++ +F A L +YW +SN+ +I Q I + Sbjct: 186 MQGPMAFMMWVYPILIFVMAYNFAAALPLYWIFSNLYTIAQNYFIYRK 233 >gi|328469001|gb|EGF39959.1| hypothetical protein LM220_14040 [Listeria monocytogenes 220] Length = 268 Score = 130 bits (327), Expect = 5e-28, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 114/224 (50%), Gaps = 27/224 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + + + + G++ + I++ T+ ++LL PL KQ S M N+QPKI EL Sbjct: 45 YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 104 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E++ Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAEIKTD 164 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPAD 513 + W++ L DP I P++ +L+ F+ K+S + Sbjct: 165 S-FLWMQ-LGNPDPYY-------------------ILPVVAALTTFLSSKISMMGQTQQN 203 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I Sbjct: 204 KSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLIN 247 >gi|196249190|ref|ZP_03147889.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16] gi|196211419|gb|EDY06179.1| 60 kDa inner membrane insertion protein [Geobacillus sp. G11MC16] Length = 249 Score = 130 bits (327), Expect = 5e-28, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 124/245 (50%), Gaps = 27/245 (11%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 P E YF+ +L+++ + N+GIAI++ T+ V+ PL KQ+ Sbjct: 19 SSNEPIDEHSQGIWNHYFVYPMSKLLLTFGHWFGDNYGIAIIVLTLIVRFCLLPLILKQF 78 Query: 384 VSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 ++ M+ ++P++ +L+EK+K P + LQ+ M+QLY+ H INP +GC P+L+Q+P+F Sbjct: 79 RTSIAMQKLRPELLKLQEKYKSKDPETQRKLQQEMVQLYQKHGINPASGCLPVLIQMPIF 138 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y IS + E++ + W++ L DP I PI+ +L+ Sbjct: 139 MALYYAISRTQEIKTHS-FLWVE-LGHRDPYF-------------------ILPILAALT 177 Query: 501 MFIQMKMSPPPAD---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 F+ +++SP + AM+ MPV+ SS P+ L +YW SI+Q ++ Sbjct: 178 TFLSLRLSPSMTEEQMPQMAMMSYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLMLR 237 Query: 558 KMHGA 562 A Sbjct: 238 SQLKA 242 >gi|58338216|ref|YP_194801.1| stage III sporulation protein J [Lactobacillus acidophilus NCFM] gi|58255533|gb|AAV43770.1| stage III sporulation protein J [Lactobacillus acidophilus NCFM] Length = 291 Score = 130 bits (327), Expect = 5e-28, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 21/264 (7%) Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 P +W + + ++ + ++G AI++ T+ V+++ PL Sbjct: 32 QGANGQVTPVSHTSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTIIVRVILLPLN 91 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQ 436 ST M++IQP+I+ELR+K+ + Q+ +LYK +NP GC P+++Q Sbjct: 92 AISIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVIIQ 151 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 +PV +A+Y I + ++ + W+ DL+ DP I + + + Sbjct: 152 LPVMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAM---------------VF 194 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 LS +I +P + G ++ + M ++ +F + + +YW SN+ VQ + Sbjct: 195 TFLSTYISQLSTPKSSQNGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQAVQTFI 254 Query: 556 IMKMHGAEIGLIDRLRSTFSKNYN 579 + + + + Sbjct: 255 LQNPIKYRKEQEAKNEAERERKRK 278 >gi|300742660|ref|ZP_07072681.1| putative 60Kd inner membrane family protein [Rothia dentocariosa M567] gi|300381845|gb|EFJ78407.1| putative 60Kd inner membrane family protein [Rothia dentocariosa M567] Length = 337 Score = 130 bits (327), Expect = 5e-28, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 103/258 (39%), Gaps = 26/258 (10%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F++ + ++F + M + + I+ T+ ++ L PL KQ + M Sbjct: 6 FKLAVSAVLWFFHTIFTSIGMDPSSGFT--WVLCIICLTLVMRTLTIPLFVKQIKAMRGM 63 Query: 390 KNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 +Q + +L+ K+K Q + + + LYK H NP A C PI+ Q+P+FF +Y+ Sbjct: 64 NAMQGDLAKLQAKYKGKKDQLSRQAMAQEQMALYKKHGTNPFASCLPIIAQMPIFFGLYQ 123 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL----------PGFMHVGIWPI 495 V+ + + +FG F I + Sbjct: 124 VLMGISGAAAKNEGILLLPAELVKQFSEAHIFGAPIFSTMMNPGNGNHAATVAQAIIMIL 183 Query: 496 IMSLSMFIQMKM----SPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 +MS + F K + A K Q M++ P++F +FP G++ YW+ S Sbjct: 184 LMSGTQFFIQKQLSAKNMSEAAKNSPIFRQQQMMMYIFPIIFAVTGINFPLGVMYYWTVS 243 Query: 546 NVISIVQQAVIMKMHGAE 563 N ++ QQ +++ + Sbjct: 244 NFWALGQQWWVIRNNPTP 261 >gi|255657635|ref|ZP_05403044.1| putative sporulation membrane protein [Clostridium difficile QCD-23m63] gi|296452684|ref|ZP_06894375.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP08] gi|296880064|ref|ZP_06904033.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP07] gi|296258466|gb|EFH05370.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP08] gi|296428931|gb|EFH14809.1| ParB/SpoJ family partitioning protein [Clostridium difficile NAP07] Length = 235 Score = 130 bits (326), Expect = 6e-28, Method: Composition-based stats. Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 36/254 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 I + +++ + V ++GI+I+L T+ VK++ PL KQ ST M++IQP+I E Sbjct: 1 MNIIGNFLGLILKVIFEFVNHYGISIILFTILVKIILLPLTIKQTKSTKAMQDIQPRIKE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE------ 452 ++EK+K P+ + +++LY INPL+GC P+L+Q P+ ++ V+ + Sbjct: 61 IQEKYKN-KPEKQNEEIVKLYGEAKINPLSGCLPLLIQFPILIGLFSVLREPVAHGVFAN 119 Query: 453 ----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + WIK L + D I + S ++ K+ Sbjct: 120 KAAFLAADNGFLWIKSLTSPD---------------------YILAVFSGASAYVMQKV- 157 Query: 509 PPPADKGQ--AMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P D+ Q ++ + M + + FPAGL +YW+ SN+ SI Q +IM A++ Sbjct: 158 MTPKDQLQGSMKVMTYVMAGMSFYWGFIFPAGLTLYWTVSNLFSIAQYYLIMNPLKAKLA 217 Query: 566 LIDRLRSTFSKNYN 579 + K Sbjct: 218 ANSKEEKVNEKKPK 231 >gi|138895363|ref|YP_001125816.1| stage III sporulation protein J [Geobacillus thermodenitrificans NG80-2] gi|134266876|gb|ABO67071.1| Stage III sporulation protein J [Geobacillus thermodenitrificans NG80-2] Length = 249 Score = 130 bits (326), Expect = 6e-28, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 124/245 (50%), Gaps = 27/245 (11%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 P E YF+ +L+++ + N+GIAI++ T+ V+ PL KQ+ Sbjct: 19 SSNEPIDEHSQGIWNHYFVYPMSKLLLTFGHWFGNNYGIAIIVLTLIVRFCLLPLILKQF 78 Query: 384 VSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 ++ M+ ++P++ +L+EK+K P + LQ+ M+QLY+ H INP +GC P+L+Q+P+F Sbjct: 79 RTSIAMQKLRPELLKLQEKYKSKDPETQRKLQQEMVQLYQKHGINPASGCLPVLIQMPIF 138 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y IS + E++ + W++ L DP I PI+ +L+ Sbjct: 139 MALYYAISRTQEIKTHS-FLWVE-LGHRDPYF-------------------ILPILAALT 177 Query: 501 MFIQMKMSPPPAD---KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 F+ +++SP + AM+ MPV+ SS P+ L +YW SI+Q ++ Sbjct: 178 TFLSLRLSPSMTEEQMPQMAMMSYIMPVMIFIGASSVPSALSLYWVVGGCFSIIQSLMLR 237 Query: 558 KMHGA 562 A Sbjct: 238 SQLKA 242 >gi|269798910|ref|YP_003312810.1| hypothetical protein Vpar_1856 [Veillonella parvula DSM 2008] gi|269095539|gb|ACZ25530.1| 60 kDa inner membrane insertion protein [Veillonella parvula DSM 2008] Length = 221 Score = 130 bits (326), Expect = 6e-28, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 24/211 (11%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 ++G+AI+L T+ +K + PL KQ S M+ +QP++ +L++K+K P + LQ M Sbjct: 31 YPSYGVAIILLTIVIKAILAPLTVKQIKSMKAMQELQPRMKQLQDKYKNDPAK-LQAEMG 89 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYK +NPLAGC P+L+Q+P AIY + + + W+ L DP Sbjct: 90 ALYKEMGVNPLAGCLPLLVQMPFLIAIYWALKDYPYDPNFVQFLWLPSLGDPDPMY---- 145 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMILN-WMPVVFVFALS 532 I PI+ +LS ++ + + A Q I+ +MP+ + Sbjct: 146 ---------------ILPILSALSTWVMSRQTSSGATGAAAQQQKIMTIFMPLFIGYISL 190 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 SFP+GL+IYW SNV ++QQ I K A+ Sbjct: 191 SFPSGLVIYWVVSNVFQLIQQHFIYKNLNAK 221 >gi|304385852|ref|ZP_07368196.1| stage III sporulation protein J [Pediococcus acidilactici DSM 20284] gi|304328356|gb|EFL95578.1| stage III sporulation protein J [Pediococcus acidilactici DSM 20284] Length = 279 Score = 130 bits (326), Expect = 6e-28, Method: Composition-based stats. Identities = 56/249 (22%), Positives = 113/249 (45%), Gaps = 29/249 (11%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + ++ N+G I++ TV ++++ PL Q ++ +QPK+ EL+ Sbjct: 40 IVYNFSKFIIYLSKICGNNYGWGIIVFTVLIRIIILPLMIYQTKTSMKTAELQPKLKELQ 99 Query: 401 EKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +K+ Q L++ +LY +NP+AGC P+++Q+PV +A+Y +S + ++ Sbjct: 100 QKYSSRDVETQQKLREEQQKLYAEAGVNPMAGCLPLIIQLPVMYALYAAVSRTQVLK-EG 158 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL----SMFIQMKMSPPPAD 513 + W++ L DP I PI+ ++ S ++ MK P A Sbjct: 159 TFLWLQ-LNDKDPYY-------------------ILPILAAIFTFLSTWLSMKAQPAGAQ 198 Query: 514 KGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G + + MP++ + +FPA + +YW +N+ + Q VI + +L++ Sbjct: 199 NGMTSAMTFGMPLIILITALNFPAAITLYWVVTNLFQVGQTLVIQNPFKIQKERQAKLQA 258 Query: 573 TFSKNYNSQ 581 +K + Sbjct: 259 EKAKRKAIE 267 >gi|227498802|ref|ZP_03928942.1| sporulation associated-membrane protein [Acidaminococcus sp. D21] gi|226904254|gb|EEH90172.1| sporulation associated-membrane protein [Acidaminococcus sp. D21] Length = 210 Score = 130 bits (326), Expect = 6e-28, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 108/202 (53%), Gaps = 22/202 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 ++G+AI++ T+ +KLL +PL K+Q ST M IQP++ EL+ +++ + L + + + Sbjct: 25 PSYGLAIIIMTILIKLLLYPLTKRQIASTKAMSRIQPRMKELQMRYRDDKMK-LNEELSK 83 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK +NPLAGC P+++Q+P+ I+ I + W++ + DP Sbjct: 84 LYKKEGVNPLAGCLPLVIQMPIMIGIFYGIR-DFNYEGPSSFLWMQSIGQPDPYY----- 137 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-KGQAMILNWMPVVFVFALSSFPA 536 I PI+ +L+ +IQ + S PP+D ++L +MP+ + FPA Sbjct: 138 --------------ILPILSALTTYIQSRQSMPPSDNPTGKVMLYFMPLFIGYISLKFPA 183 Query: 537 GLIIYWSWSNVISIVQQAVIMK 558 GL++YW N++ I QQ + + Sbjct: 184 GLVLYWVVMNLMQIGQQFFMDR 205 >gi|126701305|ref|YP_001090202.1| putative sporulation membrane protein [Clostridium difficile 630] gi|254977339|ref|ZP_05273811.1| putative sporulation membrane protein [Clostridium difficile QCD-66c26] gi|255102896|ref|ZP_05331873.1| putative sporulation membrane protein [Clostridium difficile QCD-63q42] gi|255308716|ref|ZP_05352887.1| putative sporulation membrane protein [Clostridium difficile ATCC 43255] gi|255316423|ref|ZP_05358006.1| putative sporulation membrane protein [Clostridium difficile QCD-76w55] gi|255519083|ref|ZP_05386759.1| putative sporulation membrane protein [Clostridium difficile QCD-97b34] gi|255652266|ref|ZP_05399168.1| putative sporulation membrane protein [Clostridium difficile QCD-37x79] gi|260685220|ref|YP_003216505.1| putative sporulation membrane protein [Clostridium difficile CD196] gi|260688879|ref|YP_003220013.1| putative sporulation membrane protein [Clostridium difficile R20291] gi|306521981|ref|ZP_07408328.1| putative sporulation membrane protein [Clostridium difficile QCD-32g58] gi|115252742|emb|CAJ70587.1| Sporulation membrane protein SpoIIIJ [Clostridium difficile] gi|260211383|emb|CBA67040.1| putative sporulation membrane protein [Clostridium difficile CD196] gi|260214896|emb|CBE07703.1| putative sporulation membrane protein [Clostridium difficile R20291] Length = 235 Score = 130 bits (326), Expect = 6e-28, Method: Composition-based stats. Identities = 65/254 (25%), Positives = 117/254 (46%), Gaps = 36/254 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 I + +++ + V ++GI+I+L T+ VK++ PL KQ ST M++IQP+I E Sbjct: 1 MNIIGNFLGLILKVIFEFVNHYGISIILFTILVKIILLPLTIKQTKSTKAMQDIQPRIKE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE------ 452 ++EK+K P+ + +++LY INPL+GC P+L+Q P+ ++ V+ + Sbjct: 61 IQEKYKN-KPEKQNEEIVKLYGEAKINPLSGCLPLLIQFPILIGLFSVLREPVAHGVFAN 119 Query: 453 ----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + WIK L + D + + S ++ K+ Sbjct: 120 KAAFLAADNGFLWIKSLTSPD---------------------YVLAVFSGASAYVMQKV- 157 Query: 509 PPPADKGQ--AMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P D+ Q ++ + M + + FPAGL +YW+ SN+ SI Q +IM A++ Sbjct: 158 MTPKDQLQGSMKVMTYVMAGMSFYWGFIFPAGLTLYWTVSNLFSIAQYYLIMNPLKAKLA 217 Query: 566 LIDRLRSTFSKNYN 579 + K Sbjct: 218 ANSKEEKVNEKKPK 231 >gi|289523248|ref|ZP_06440102.1| membrane protein insertase, YidC/Oxa1 family [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503791|gb|EFD24955.1| membrane protein insertase, YidC/Oxa1 family [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 256 Score = 130 bits (326), Expect = 6e-28, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 136/255 (53%), Gaps = 22/255 (8%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 M ++++FY + ++GIAI+L T+ +++L +PL+ KQ VS M+ IQP++ L+EK+K Sbjct: 1 MLGVLNFFYEISNSYGIAIILLTILIRILLYPLSHKQLVSMKKMQQIQPRLKTLQEKYKD 60 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS---------LEMRHA 456 Q L + +++LYK + +NP AGC P+L+Q+P+ +++VI + ++H+ Sbjct: 61 -DRQKLNQEVMKLYKEYGVNPAAGCLPLLVQLPILILLFRVIMNYDFGEEFFVGVSLKHS 119 Query: 457 PFWGWIKDLAAADPTN--IFTLFGILPFYLPGFMHVGI------WPIIMSLSMFIQMKMS 508 + L A++ I T+ G + G ++ GI + + + Q KM+ Sbjct: 120 LLALMSQALGASETARAGITTVLGAIASNPAGLLNFGIYGGTLLLWLGVGFVTWFQQKMT 179 Query: 509 PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM---HGAEI 564 A Q + +MP+ +F S P G+++YW S++I +VQQA + + GA+ Sbjct: 180 TSSAASEQMAFMGWFMPLFMMFICLSLPGGVLLYWGVSSLIGVVQQAWVQRKALVEGAKK 239 Query: 565 GLIDRLRSTFSKNYN 579 ++ + + ++ Sbjct: 240 PVLYKEKPRSAEKPK 254 >gi|88854496|ref|ZP_01129163.1| putative inner membrane protein translocase component YidC [marine actinobacterium PHSC20C1] gi|88816304|gb|EAR26159.1| putative inner membrane protein translocase component YidC [marine actinobacterium PHSC20C1] Length = 325 Score = 130 bits (326), Expect = 7e-28, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 112/267 (41%), Gaps = 33/267 (12%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGN-----------FGIAIMLTTVFVKLLFFPL 378 ++ +G + K + + ++ + + + ++I+ + V+ P+ Sbjct: 1 MDLFAFFGTLLWPIKWVIEAILVAFHTLLSAVGMDGDAGLTWVLSIVGLVLVVRAALIPV 60 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPIL 434 +Q S M + P++ ++++K+K Q + + + +YK NP + C P+L Sbjct: 61 FVRQIKSQRRMMEVAPQLKKIQDKYKGKKDQFSREAMSRETMAMYKNAGTNPFSSCLPLL 120 Query: 435 LQIPVFFAIYKVISIS-LEMRHAPFWGWIKDL-------AAADPTNIFTLFGILPFYLPG 486 LQ+P+FF ++ V+ + LE A DL + D + +P Sbjct: 121 LQMPIFFGLFSVLREAQLEDNPAGVGLLNADLAQSFGTSSLFDIAPLHLAISTAEGNIPV 180 Query: 487 FMHVGIWPIIMSLSMFIQMKMSP-------PPADKG--QAMILNWM-PVVFVFALSSFPA 536 + I I+M+ S FI A Q I+ +M P+VF F+ +FP Sbjct: 181 IITAVIMVILMTGSQFITQLQIMSKNQSAEMKASPMYRQQRIMLYMLPLVFAFSGFTFPL 240 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAE 563 G++ YW SN ++ QQ ++++ Sbjct: 241 GVMFYWLVSNFWTMGQQFLVIRNMPTP 267 >gi|282848769|ref|ZP_06258164.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula ATCC 17745] gi|294792401|ref|ZP_06757548.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp. 6_1_27] gi|294794207|ref|ZP_06759343.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp. 3_1_44] gi|282581555|gb|EFB86943.1| membrane protein insertase, YidC/Oxa1 family [Veillonella parvula ATCC 17745] gi|294454537|gb|EFG22910.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp. 3_1_44] gi|294456300|gb|EFG24663.1| membrane protein insertase, YidC/Oxa1 family [Veillonella sp. 6_1_27] Length = 221 Score = 130 bits (326), Expect = 7e-28, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 24/211 (11%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 ++G+AI+L T+ +K + PL KQ S M+ +QP++ +L++K+K P + LQ M Sbjct: 31 YPSYGVAIILLTIVIKAILAPLTVKQIKSMKAMQELQPRMKQLQDKYKNDPAK-LQAEMG 89 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 LYK +NPLAGC P+L+Q+P AIY + + + W+ L DP Sbjct: 90 ALYKEMGVNPLAGCLPLLVQMPFLIAIYWALKDYPYDPNFVQFLWLPSLGDPDPMY---- 145 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMILN-WMPVVFVFALS 532 I PI+ +LS ++ + + A Q I+ +MP+ + Sbjct: 146 ---------------ILPILSALSTWVMSRQTSNGATGAAAQQQKIMTIFMPLFIGYISL 190 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 SFP+GL+IYW SNV ++QQ I K A+ Sbjct: 191 SFPSGLVIYWVVSNVFQLIQQHFIYKNLNAK 221 >gi|72163513|ref|YP_291170.1| hypothetical protein Tfu_3114 [Thermobifida fusca YX] gi|71917245|gb|AAZ57147.1| putative membrane protein [Thermobifida fusca YX] Length = 308 Score = 130 bits (326), Expect = 7e-28, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 31/229 (13%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G++I+L T+ V++L PL KQ + ++ +QPK+ ++RE++K Q LQ+ I++Y Sbjct: 32 WGLSIVLLTILVRVLMIPLFVKQMNTQRKLQELQPKLLKVRERYKNDK-QRLQQEQIKIY 90 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI------ 473 + NPL GC P+LLQ+PVFFA++ V+ E +G+ ++LA + + + Sbjct: 91 QESGTNPLMGCLPLLLQMPVFFALFNVLRQIAE--GEAKFGFTQELANSAQSALIFGAPI 148 Query: 474 ----------FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--------DKG 515 FG P + + + +IM + F+ M+ S + Sbjct: 149 AAHFTSSADELAAFGADPIM--AKVIIAVACVIMGTTTFLTMRQSMSRTLKQPGMEDNPM 206 Query: 516 --QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 I+ ++ F + P G++IYW SN+ ++ QQ + + Sbjct: 207 VQSQKIMMYIAPAFGLFGLAMPVGVLIYWVTSNLWTMGQQHFLYRKFPP 255 >gi|163842273|ref|YP_001626678.1| inner membrane protein [Renibacterium salmoninarum ATCC 33209] gi|162955749|gb|ABY25264.1| inner membrane protein [Renibacterium salmoninarum ATCC 33209] Length = 321 Score = 130 bits (326), Expect = 7e-28, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 26/232 (11%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQK 413 + ++I+ + ++ P+ KQ + M+ +QP++ +L+EK+K Q + + Sbjct: 38 WTWTLSIIGLVIVIRAALIPVFVKQIKAQRGMQALQPEMKKLQEKYKGKTDQLSRQAMAQ 97 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEMRHAPFWGWIKDLAAADP 470 + LYK+H NP + C PIL+Q+P FF++++V+S + + + D Sbjct: 98 EQMALYKSHGTNPFSACLPILIQMPFFFSLFQVLSGVSKANQDGQGIGVLSHTQIQQFDD 157 Query: 471 TNIFTLFGILPFYL---------PGFMHVGIWPIIMSLSMFIQMKMSPP----------P 511 NI F + I + M S FI K P Sbjct: 158 ANILGAPLSKAFLPQIQGGDPNVSVIVLSIIMILAMIASQFITQKQIMAKNMSEDAMASP 217 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + Q M+L +P+VF +FP G++IYW+ +N+ ++ QQ +++ Sbjct: 218 FMRQQKMMLYILPLVFGIGGINFPIGVLIYWTTTNLWTMGQQFFVIRRMPTP 269 >gi|288555292|ref|YP_003427227.1| OxaA-like protein YidC [Bacillus pseudofirmus OF4] gi|298286838|sp|O87567|OXAA_BACPE RecName: Full=Membrane protein oxaA; Flags: Precursor gi|288546452|gb|ADC50335.1| OxaA-like protein YidC [Bacillus pseudofirmus OF4] Length = 252 Score = 130 bits (325), Expect = 7e-28, Method: Composition-based stats. Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 28/226 (12%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W +F P+ ++ +L+ +FG++I++ T+ ++L PL KQ S+ M+ ++P+ Sbjct: 34 IWNHFFVYPLSWVLISVADLLNGSFGLSIIVVTIGIRLFLLPLMIKQQKSSRAMQALRPE 93 Query: 396 IDELREKFKQ------SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ L++K+ Q Q +QK ++ LYK +NP+AGC P+ +Q+PV A Y I Sbjct: 94 MEALQKKYGQGTKRDPKDQQKMQKELMALYKDSGVNPMAGCLPLFIQLPVMMAFYFAIMR 153 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + E+ + W DL + DP I P++ ++ F+Q+KM+ Sbjct: 154 T-EVIALHSFLWF-DLGSPDPLY-------------------ILPVVAGITTFLQVKMTS 192 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + +I+ MPV+ V A + P+ L +YW N+ I+Q Sbjct: 193 FQLNDQMKVIIYIMPVMIVVAGVTLPSALSLYWVVGNLFMIIQTYF 238 >gi|326329125|ref|ZP_08195453.1| membrane protein OxaA [Nocardioidaceae bacterium Broad-1] gi|325953012|gb|EGD45024.1| membrane protein OxaA [Nocardioidaceae bacterium Broad-1] Length = 330 Score = 130 bits (325), Expect = 8e-28, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 22/265 (8%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + + + + + +AI+ TV ++ L PL KQ S+ NM+ +Q Sbjct: 15 LYYAISGILLVWQKAFAYVIPSEGWQWALAIVGLTVTIRALLIPLFVKQINSSRNMQLLQ 74 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ EL++K+ + L ++LYK NP A C P+LLQ+P+FF +++++ + + Sbjct: 75 PKVRELQKKY-GHDREKLANETMKLYKDSGTNPFASCLPLLLQMPIFFVLFRMLEHASDG 133 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPF------YLPGFMHVGIWPIIMSLSMFIQMKM 507 G++ D AA + L +L + + G + M + F+ + Sbjct: 134 IGK---GFLSDEAAHEFATSTWLGSLLSDQFTTADHTSTYFLTGFLVVAMIATTFLTQRQ 190 Query: 508 SP---PPADKG------QAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 PAD Q +L + +PVVF +FP G I+YW+ SN+ ++ QQ ++ Sbjct: 191 LMSKNMPADAMTGQYAQQQKLLLYVLPVVFAVGGIAFPVGTILYWTSSNLWTMGQQFYVI 250 Query: 558 KMHGAE--IGLIDRLRSTFSKNYNS 580 + + A + +K Sbjct: 251 RNNPAPGTPAFEAKQERDKAKRRKK 275 >gi|294101695|ref|YP_003553553.1| membrane protein insertase, YidC/Oxa1 family [Aminobacterium colombiense DSM 12261] gi|293616675|gb|ADE56829.1| membrane protein insertase, YidC/Oxa1 family [Aminobacterium colombiense DSM 12261] Length = 263 Score = 130 bits (325), Expect = 9e-28, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 120/247 (48%), Gaps = 20/247 (8%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + + +++ +NL G++GIAI+L T+ V++L PL KQ VS M+ +QP++ Sbjct: 3 TLWKAAGDFILLILETLHNLTGSWGIAIILLTLAVRILLHPLTHKQMVSMQRMQKLQPRM 62 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS------ 450 L+EK+K L + ++ LYK + +NP AGC P+L+Q+P+ +++++ Sbjct: 63 KMLQEKYKDDKET-LNREIMSLYKENKVNPAAGCLPLLVQLPILILLFRLLMNYNFGSVP 121 Query: 451 ----LEMRHAPFWGWIKDLAAADPTNI--FTLFGILPFYLPGFMHVGI------WPIIMS 498 + + + + +A + T I + + G VG+ +++ Sbjct: 122 FLGFISLEGSVLSTLAQAVALPETTKIGVMAVLSGVLANPAGLAQVGLYLGNLMLLVVVG 181 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + + Q +MS + AM+ +MP+ F S P G+++YW S+ + + QQ I K Sbjct: 182 ILTWAQQQMS-STGNPQMAMMSWFMPLFLTFICLSLPGGVLLYWGVSSFLGVAQQWWITK 240 Query: 559 MHGAEIG 565 E+ Sbjct: 241 KTSQEMQ 247 >gi|269792319|ref|YP_003317223.1| 60 kDa inner membrane insertion protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099954|gb|ACZ18941.1| 60 kDa inner membrane insertion protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 268 Score = 130 bits (325), Expect = 9e-28, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 122/264 (46%), Gaps = 22/264 (8%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + M ++ FY + ++G++I++ TV V++L PL+ KQ VS M+ IQP+I Sbjct: 3 SLWSAAGDLMLRTLNLFYAITHSYGLSIIMLTVVVRILLHPLSHKQMVSMQKMQKIQPRI 62 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI------- 449 ++EK+ ++ + ++QLY+ + +NP AGC P+L+Q+P+F +Y+ + Sbjct: 63 KVIQEKYANDKEKM-NQEIMQLYRENGVNPAAGCLPLLVQLPIFILLYRALINYDFSNTS 121 Query: 450 ----SLEMRHAPFWGWIKDLAAADPTNIFTLFGILP-----FYLPGFMHVGIWPIIMSLS 500 +L M +++A PT L GIL + + I +++ Sbjct: 122 FLGVNLSMSALGAMANALGISSAKPTFTAILSGILTNPAGLANVGVYAPSVILIVLVGFL 181 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM- 559 + Q KMS + A + +MP+ F S P G++IYW S+ IS+ QQ +M Sbjct: 182 TWYQQKMS-SGNNPQMAFMNWFMPLFMSFICLSLPGGVMIYWGASSFISVAQQKWVMMRT 240 Query: 560 ---HGAEIGLIDRLRSTFSKNYNS 580 + L K + Sbjct: 241 EEEMKVKPTLHKNKPEHQEKAEKT 264 >gi|323357960|ref|YP_004224356.1| preprotein translocase subunit YidC [Microbacterium testaceum StLB037] gi|323274331|dbj|BAJ74476.1| preprotein translocase subunit YidC [Microbacterium testaceum StLB037] Length = 358 Score = 130 bits (325), Expect = 9e-28, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 32/267 (11%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 +F + + ++I+ + V+ PL KQ S M I P++ +++EK+ Sbjct: 25 HALFTALGMAPAAGLTWVLSIVGLVLIVRAALIPLFVKQIKSQRKMMEIAPELRKVQEKY 84 Query: 404 KQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 K Q + + + LYK H P++ C P+L+Q+P+FFA++ V++ +HA Sbjct: 85 KGKRDQLSREAMSRETMALYKKHGTTPVSSCLPLLVQMPIFFALFSVLNDV--SKHAASG 142 Query: 460 GWIKDLAAADPTNIF---------------TLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 L + T F P + ++M S F Sbjct: 143 VGGVGLLTPELTTEFYDARLFDVASMHVNLVTAWNQPDGQVTVAILLTLVVLMIASQFFT 202 Query: 505 M------KMSPPP----ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 +SP A + Q ++L +P+ F+F+ FP G++IYW SN+ ++VQQ Sbjct: 203 QLQIISKNLSPEAKTGQAYQMQKVMLYILPLAFIFSGVFFPLGVVIYWFVSNLWTMVQQF 262 Query: 555 VIMKMHGAE-IGLIDRLRSTFSKNYNS 580 V+++ ++ + Sbjct: 263 VVIREMPTPGSDAAKAREERLARKGKA 289 >gi|224104461|ref|XP_002313443.1| inner membrane protein [Populus trichocarpa] gi|222849851|gb|EEE87398.1| inner membrane protein [Populus trichocarpa] Length = 446 Score = 130 bits (325), Expect = 9e-28, Method: Composition-based stats. Identities = 80/355 (22%), Positives = 148/355 (41%), Gaps = 33/355 (9%) Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 + + +PS + + + + I SI + + T+ Sbjct: 11 FIATSLPSLSRHTLTTNRRFISTRIKLSLHDNIPPIHHHLDSSIDFNSIISRAEGFLYTL 70 Query: 319 HHYEKDLAIPRFEMLIDW-----GWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLT 367 + D GWF FI+ M ++ ++ +G AI+L Sbjct: 71 ADAAVAVDSAASTTSTDTAQKSGGWFGFISDGMEFVLKVLKDGLSAVHVPYAYGFAIILL 130 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 TVFVK+ PL KKQ ST M+N+QPKI +++++ + + +Q +LY+ +NPL Sbjct: 131 TVFVKVATLPLTKKQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLETSRLYRQAGVNPL 189 Query: 428 AGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 AGC+P L IPV+ +Y+ +S + E + WI L + + P Sbjct: 190 AGCFPTLATIPVWIGLYQALSNVANEGVLTEGFFWIPSLGGPTTIAARQSGSGISWLFPF 249 Query: 487 FMHVGIW-----------PIIMSLSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFVFA 530 P+++ +S ++ M++ PP D Q + ++P++ + Sbjct: 250 VDGHPPLGWNDTAAYLVLPVLLVVSQYVSMEIMKPPQTDDPTQKNTLLVFKFLPLMIGYF 309 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581 S P+GL IYW +NV+S QQ + ++ GA+ + + + + +K +Q Sbjct: 310 SLSVPSGLSIYWFTNNVLSTAQQVWLRQLGGAKPVVNENASGIITAGRAKRSAAQ 364 >gi|108712059|gb|ABF99854.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza sativa Japonica Group] Length = 372 Score = 130 bits (325), Expect = 9e-28, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 17/190 (8%) Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLA 466 + +Q +LYK +++PLAGC P L+ IPV+ +Y+ +S + E + WI LA Sbjct: 36 KERIQLETARLYKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLA 95 Query: 467 AADPTN-------IFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--D 513 I LF G P + + P+++ +S ++ ++ PP D Sbjct: 96 GPTTIAARQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNND 155 Query: 514 KGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 Q ++ ++P++ + S P+GL +YW +N++S QQ + K+ GA+ + + + Sbjct: 156 PSQQGAQAVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYI 215 Query: 571 RSTFSKNYNS 580 + + Sbjct: 216 DKLAKEESTN 225 >gi|323487690|ref|ZP_08092948.1| membrane protein oxaA 1 [Planococcus donghaensis MPA1U2] gi|323398424|gb|EGA91212.1| membrane protein oxaA 1 [Planococcus donghaensis MPA1U2] Length = 259 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 119/254 (46%), Gaps = 24/254 (9%) Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 L + + P + + W FI P+ ++YF L+G +G I+ Sbjct: 7 LLISLIAVTLLLSGCTEFDQPISDQSEGF-WNEFIVWPLVSTITYFKGLLGTYGFGIIAV 65 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNI 424 T+ ++L+ PL KQ S+ M+ +QP++ +L+EK+K Q QK M+ L++ + Sbjct: 66 TIIIRLVMLPLMVKQTKSSKRMQEVQPELVKLKEKYKSKDAVTQQKYQKEMMALFQEKGV 125 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NP+AGC P+++Q+PV Y IS M + P DL + F I P Sbjct: 126 NPMAGCLPVVIQMPVLIGFYHAISR---MNNTPEI----DLGS---------FLIFPLAE 169 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 P I +I L F+ ++ P + +++ +MPV+ + P+ L +YW Sbjct: 170 PSI----ILAVIAGLMQFVVLRTGPAMDNPQMRIMMYFMPVMIIGFGIVLPSALTLYWVI 225 Query: 545 SNVISIVQQAVIMK 558 N+IS++Q VI + Sbjct: 226 GNIISLIQNLVIYR 239 >gi|270289895|ref|ZP_06196121.1| membrane protein oxaA [Pediococcus acidilactici 7_4] gi|270281432|gb|EFA27264.1| membrane protein oxaA [Pediococcus acidilactici 7_4] Length = 279 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 113/249 (45%), Gaps = 29/249 (11%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + ++ N+G I++ TV ++++ PL Q ++ +QPK+ EL+ Sbjct: 40 IVYNFSKFIIYLSKICGNNYGWGIIVFTVLIRIIILPLMIYQTKTSMKTAELQPKLKELQ 99 Query: 401 EKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +K+ Q L++ +LY +NP+AGC P+++Q+PV +A+Y +S + ++ Sbjct: 100 QKYSSRDVETQQKLREEQQKLYAEAGVNPMAGCLPLIIQLPVMYALYAAVSRTQVLK-EG 158 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS----LSMFIQMKMSPPPAD 513 + W++ L DP I PI+ + LS ++ MK P A Sbjct: 159 TFLWLQ-LNDKDPYY-------------------ILPILAAFFTFLSTWLSMKAQPAGAQ 198 Query: 514 KGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G + + MP++ + +FPA + +YW +N+ + Q VI + +L++ Sbjct: 199 NGMTSAMTFGMPLIILITALNFPAAITLYWVVTNLFQVGQTLVIQNPFKIQKERQAKLQA 258 Query: 573 TFSKNYNSQ 581 +K + Sbjct: 259 EKAKRKAIE 267 >gi|34763009|ref|ZP_00143985.1| 60 kDa inner membrane protein YIDC [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237741004|ref|ZP_04571485.1| inner membrane protein YIDC [Fusobacterium sp. 4_1_13] gi|256846682|ref|ZP_05552138.1| inner membrane protein YIDC [Fusobacterium sp. 3_1_36A2] gi|294784389|ref|ZP_06749680.1| stage III sporulation protein J [Fusobacterium sp. 3_1_27] gi|27887310|gb|EAA24404.1| 60 kDa inner membrane protein YIDC [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229431048|gb|EEO41260.1| inner membrane protein YIDC [Fusobacterium sp. 4_1_13] gi|256717902|gb|EEU31459.1| inner membrane protein YIDC [Fusobacterium sp. 3_1_36A2] gi|294487961|gb|EFG35316.1| stage III sporulation protein J [Fusobacterium sp. 3_1_27] Length = 205 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 62/221 (28%), Positives = 115/221 (52%), Gaps = 22/221 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + L++ VGNFGI+I++ T+ +K+L PL KQ S MK +QP++++ Sbjct: 5 YNLLQQFFAFLLNTTDKYVGNFGISIIVVTILIKILLLPLTLKQDKSMKEMKKLQPELEK 64 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +++K+ Q+L ++LY+ H +NPL GC PIL+Q+P+ FA++ V+ + + + Sbjct: 65 IKQKYANDK-QMLNIKTMELYREHKVNPLGGCLPILIQLPILFALFGVLRNGIIPKDSS- 122 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W+K L DP I P++ F+Q K+ + Sbjct: 123 FLWMK-LVDPDPFY-------------------ILPVLNGAVSFLQQKLMGTSDNPQMKN 162 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ P++ + P+GL +YW S+++++VQQ IMK Sbjct: 163 MMFVFPILMIVISYRMPSGLQLYWLTSSILAVVQQYFIMKK 203 >gi|167462794|ref|ZP_02327883.1| 60 kDa inner membrane insertion protein [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381370|ref|ZP_08055373.1| OxaA-like protein precursor [Paenibacillus larvae subsp. larvae B-3650] gi|321154946|gb|EFX47217.1| OxaA-like protein precursor [Paenibacillus larvae subsp. larvae B-3650] Length = 271 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 62/226 (27%), Positives = 115/226 (50%), Gaps = 22/226 (9%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YFI + L + ++GI+I++ T+ ++ + PL KQY S+ M+ IQP+I +L Sbjct: 39 YFIYPLSWSLDWFAGVFGNSYGISILILTIIIRFIVLPLTLKQYRSSKRMQEIQPEIKKL 98 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 ++K+K +P Q Q+ ++L++ H +NPLAGC P+L+Q+P+ A+Y+ I + +R + Sbjct: 99 QQKYKDNP-QKQQEETMKLFQQHGVNPLAGCLPLLIQMPILIALYQAIMRNDAIR-EHTF 156 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 W++ L A D I P+I +++ ++Q K ++ + Sbjct: 157 LWLQ-LGAKDDYY-------------------ILPLIAAITTYLQQKTMSAQMNQQMKSM 196 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 L PV+ SF + L +YW +SN+ +I Q + + Sbjct: 197 LFIFPVLIFVMSMSFASALPLYWIYSNLFTIAQNYFLYGRDNRKKK 242 >gi|227878344|ref|ZP_03996301.1| stage III sporulation protein J [Lactobacillus crispatus JV-V01] gi|227862080|gb|EEJ69642.1| stage III sporulation protein J [Lactobacillus crispatus JV-V01] Length = 296 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 114/256 (44%), Gaps = 23/256 (8%) Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 A P +W + + ++ + ++G AI++ TV V+++ PL Sbjct: 39 ANGQATPISHTSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTVIVRVILVPLNAI 98 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIP 438 ST M++IQP+I+ELR+K+ + Q+ +LYK +NP GC P+L+Q+P Sbjct: 99 SIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLP 158 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 V +A+Y I + ++ + W+ DL+ DP I + ++ + Sbjct: 159 VMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAMIFTF--------------- 201 Query: 499 LSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 LS +I +P + G ++ + M ++ +F + + +YW SN+ +Q ++ Sbjct: 202 LSTYISQLSTPKSSQNGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQALQTFILQ 261 Query: 558 KMHGAEIGLIDRLRST 573 + + ++ Sbjct: 262 --NPIKYRREQEAKAE 275 >gi|117929365|ref|YP_873916.1| 60 kDa inner membrane insertion protein [Acidothermus cellulolyticus 11B] gi|117649828|gb|ABK53930.1| 60 kDa inner membrane insertion protein [Acidothermus cellulolyticus 11B] Length = 315 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 32/233 (13%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +G++++L TV V++L FPL KQ S M + PK+ EL+ K+K + L + LY Sbjct: 35 WGLSVVLLTVIVRILLFPLFVKQVRSQRAMTELAPKLKELQAKYKN-DRERLGTETMALY 93 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA-------PFWGWIKDLAA----- 467 + H +NP GC PIL Q PVF+A++ V+ + + P +GW L Sbjct: 94 REHGVNPFMGCLPILAQAPVFYALFHVLRYVSDHGSSKPPAGFHPEYGWTVSLLQSAGHA 153 Query: 468 ----------ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK----MSPPPAD 513 + +FG + + I M+ + F+ + + + Sbjct: 154 KVFGVPLALGFRTADRAPMFGADSTTVHVVTLLAILA--MATTTFLTQRQLIVKNAAAGN 211 Query: 514 KG--QAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q +L + +P +F + + G+++YW SN+ S+ QQ I++ + Sbjct: 212 PMAQQQKMLLYVLPPIFALSGLLWQMGVLVYWVTSNLWSLGQQHYIIRTMPIK 264 >gi|294500761|ref|YP_003564461.1| membrane protein OxaA [Bacillus megaterium QM B1551] gi|295706106|ref|YP_003599181.1| membrane protein OxaA [Bacillus megaterium DSM 319] gi|294350698|gb|ADE71027.1| membrane protein OxaA [Bacillus megaterium QM B1551] gi|294803765|gb|ADF40831.1| membrane protein OxaA [Bacillus megaterium DSM 319] Length = 272 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 109/226 (48%), Gaps = 26/226 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YF+ L G++G++I++ TV ++L+ PL KQ ST M+ ++P+++++ Sbjct: 41 YFVYPLSMALTKIAEWAGGSYGLSIIIATVIIRLVLLPLILKQQKSTMAMQALRPEMEKI 100 Query: 400 REKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 ++K+ Q+ + LY+TH INP+ GC PI +Q+P+ A Y I+ + E+ Sbjct: 101 QKKYAGKKDPETQQKQQKEMMQLYQTHKINPVGGCLPIFIQMPIIIAFYNAIARTHEIAQ 160 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-PADK 514 + W+ L DP I P++ +++ F+Q+++S Sbjct: 161 HS-FLWVS-LGKPDPYF-------------------ILPVVAAITTFLQIRVSMTDEIQP 199 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 M++N MP+ + A S P+ L +YW N+ I Q + K Sbjct: 200 PMKMMMNIMPIFILVAGISLPSALALYWVIGNLFGIGQGYYLKKRM 245 >gi|323141441|ref|ZP_08076331.1| stage III sporulation protein J [Phascolarctobacterium sp. YIT 12067] gi|322414097|gb|EFY04926.1| stage III sporulation protein J [Phascolarctobacterium sp. YIT 12067] Length = 214 Score = 129 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 30/230 (13%) Query: 339 FYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F+A + +++ YN + N G+AI+L T+ +KL+ +PL +KQ ST M IQ Sbjct: 1 MDFLANIVQQVLTVLYNFTESVGIPNLGLAIVLMTIIIKLIMYPLTQKQIQSTKAMMEIQ 60 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PK+ L+EK+K Q L + LYK+ +NPLAGC P+L+Q+P+ I+ I Sbjct: 61 PKMKALQEKYKDDK-QRLNMELANLYKSEGVNPLAGCLPLLIQMPIMIGIFYGIRDYNYA 119 Query: 454 RH---APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 H + W+ D++ ADPT + P++ +L+ FIQ K + P Sbjct: 120 AHPEIVTSFLWLADISKADPTY-------------------VLPVLSALTTFIQTKQTMP 160 Query: 511 P--ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M++ +MP+ + +FPAGL++YW N++ I QQ+++ + Sbjct: 161 ANGGGAQNKMMMYFMPLFIGYISLTFPAGLVLYWVVMNIMQIAQQSIMNR 210 >gi|262038129|ref|ZP_06011530.1| stage III sporulation protein J [Leptotrichia goodfellowii F0264] gi|261747853|gb|EEY35291.1| stage III sporulation protein J [Leptotrichia goodfellowii F0264] Length = 224 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 68/219 (31%), Positives = 119/219 (54%), Gaps = 19/219 (8%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + ++ +VGN+GIAI++ T+ V++L FPL KQ S M+ +QP++D+L+EK+K Sbjct: 17 LVVTILKAINGIVGNYGIAIIIVTIIVRILIFPLTLKQEKSMKRMRELQPQLDKLKEKYK 76 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q+LQ+ +++YK +N+NPL GC PIL+Q+P+F A++ S + + + W Sbjct: 77 D-DQQMLQQKTMEIYKENNVNPLGGCLPILIQMPIFIALFYAFSGD-AIPNDATFLWFH- 133 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-----DKGQAMI 519 L D F V + PI+ ++ F Q KM P+ + + Sbjct: 134 LKHPDNLFKIGTF-----------AVNLLPILNTVVTFFQQKMMSGPSKEQGVNSQMQSM 182 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + MP++ + + P+G+ +Y+ S V+S+ QQ +IMK Sbjct: 183 MYTMPILMLVLFYNMPSGVTLYYLVSGVLSVAQQYIIMK 221 >gi|257070288|ref|YP_003156543.1| preprotein translocase subunit YidC [Brachybacterium faecium DSM 4810] gi|256561106|gb|ACU86953.1| preprotein translocase subunit YidC [Brachybacterium faecium DSM 4810] Length = 366 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 29/247 (11%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK----AM 415 + +I+ TV V+ L PL +Q ++ +M+ + P++ +++K+K Q ++ Sbjct: 34 WVFSIVGLTVVVRTLIIPLFVRQIRASRSMQMVSPELQAVQKKYKGKTDQESRQKMAEET 93 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL--EMRHAPFWGWIKDL--AAADPT 471 + +YK +P + C P+LLQ+P+FF +++V+ L APF +L +A T Sbjct: 94 MAIYKEAGASPFSSCLPVLLQMPIFFGLFRVLFYKLPEAADGAPFGPLSTELARSARSST 153 Query: 472 NIFTLFGILPFYLPG------FMHVGIWPIIMSLSMFIQMK----MSPP------PADKG 515 + + F PG + GI M F K + P P Sbjct: 154 ILGDVTIANSFLKPGDGGTVTMVLAGIIIACMCAVTFFTQKSLTMKNMPKASLEGPMAST 213 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG-----AEIGLIDRL 570 Q M+L +P ++V P G++IYW +NV + QQA++++ AE R+ Sbjct: 214 QKMMLYMLPFIYVITGPGMPIGVLIYWLTTNVWTFGQQAIVIRATPTPGSDAEKERQARI 273 Query: 571 RSTFSKN 577 + K Sbjct: 274 NAKREKK 280 >gi|260893979|ref|YP_003240076.1| membrane protein insertase, YidC/Oxa1 family [Ammonifex degensii KC4] gi|260866120|gb|ACX53226.1| membrane protein insertase, YidC/Oxa1 family [Ammonifex degensii KC4] Length = 231 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 23/205 (11%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 V N+G+AI++ T+ V+L+ FPL +Q S ++ + PKI EL+E++ + PQ LQ+ ++ Sbjct: 28 VPNYGLAIIMLTILVRLVLFPLNYRQMRSVVALQQLHPKIKELQERY-KQDPQKLQQKLM 86 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFT 475 +LY+ HN+NP+AGC P+L+Q+P+ A+Y+ + + + W+ L+ DP Sbjct: 87 ELYREHNVNPMAGCLPLLIQLPILIALYRALLSFPYTVAEHARFLWVPSLSHTDPYF--- 143 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN--WMPVVFVFALSS 533 I P++ ++ + QMK++P A + Q + M + ++ ++ Sbjct: 144 ----------------ILPVLAGVTTYWQMKITPQAAGQEQQQRMMGILMSGMILWISAT 187 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMK 558 PAGL +YW N+IS+ QQ K Sbjct: 188 LPAGLALYWVVYNLISVAQQYFFNK 212 >gi|224107717|ref|XP_002314575.1| 60 kDa inner membrane protein [Populus trichocarpa] gi|222863615|gb|EEF00746.1| 60 kDa inner membrane protein [Populus trichocarpa] Length = 292 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 69/231 (29%), Positives = 115/231 (49%), Gaps = 18/231 (7%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 +L +G AI+L TV VK FPL+KKQ S M+++QP+I +++++ + +Q Sbjct: 57 HLPYAYGFAIILLTVLVKAATFPLSKKQVESAMAMRSLQPQIKAIQQRYAG-DQERIQLE 115 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAA----- 468 +LYK INPLAGC P L IPV+ +Y+ +S + E + WI LA Sbjct: 116 TARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTAIAS 175 Query: 469 --DPTNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFI--QMKMSPPPADKG---QA 517 + + I LF G P + + P+++ +S +I Q+ S D Sbjct: 176 RQNGSGISWLFPFVDGHPPLGWSDTVAYLVLPVMLVVSQYISVQIMQSSQSDDPNVKNSQ 235 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 I ++P++ + S P+GL +YW +N++S QQ + K GA+ ++ Sbjct: 236 AITKFLPLMIGYFSLSVPSGLSLYWLTNNILSTAQQVWLQKSGGAKNPMMK 286 >gi|260890876|ref|ZP_05902139.1| stage III sporulation protein J [Leptotrichia hofstadii F0254] gi|260859429|gb|EEX73929.1| stage III sporulation protein J [Leptotrichia hofstadii F0254] Length = 228 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 64/222 (28%), Positives = 115/222 (51%), Gaps = 19/222 (8%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + + +++ Y +VGN+G+AI++ T+ ++++ FPLA KQ + MK +QP++++++E Sbjct: 7 LVDFVVHVLNAIYGVVGNYGVAIIIVTILMRIIVFPLALKQEKAMKKMKELQPELEKIKE 66 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K +P Q Q+ +LY+ NPLAGC P+L+Q+PVF A+Y S + A + W Sbjct: 67 KYKDNP-QEYQRKTAELYRESGANPLAGCLPLLIQMPVFVALYWAFSGNAIPADA-KFLW 124 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-----DKGQ 516 L D F + PI+ + +IQ K+ + Sbjct: 125 FT-LKQPDRLFTIGKF-----------AFNLLPILNVVITYIQQKIMTDATKGQEGSQQM 172 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +L MP + + + P+G+ +Y+ S S+VQQ +I+K Sbjct: 173 QTMLYMMPALMLVIFYNMPSGVTLYYLVSGAWSVVQQYIILK 214 >gi|152977287|ref|YP_001376804.1| OxaA-like protein precursor [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026039|gb|ABS23809.1| 60 kDa inner membrane insertion protein [Bacillus cytotoxicus NVH 391-98] Length = 257 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 71/236 (30%), Positives = 121/236 (51%), Gaps = 30/236 (12%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ L+ + ++ + +FG+AI+L T+ V+ PLA QY S MK +QP Sbjct: 36 IWDHYFVYPISFLLQFAHDHIAGGSFGVAIILITLLVRSAMIPLAISQYRSQMKMKQMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ L++K+ + QK M +L K+ NPLAGC PIL+Q+P+F A+Y IS Sbjct: 96 ELQRLKDKYGDVSKDIEKQKEYQKEMSKLMKSGGWNPLAGCLPILIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + E+R + W+ +L ADP I P++ + + F+QMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYY-------------------ILPMLAAFTTFLQMKVMQ 194 Query: 510 PPADKGQA-MILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D+ Q I +M P + +F + P+GL++YW N +++Q ++ K E Sbjct: 195 TSKDQVQMLKIQQFMMPAMILFMGFAAPSGLVLYWVTGNTFTMMQTIILRKFMEHE 250 >gi|51894472|ref|YP_077163.1| SpoIIIJ [Symbiobacterium thermophilum IAM 14863] gi|51858161|dbj|BAD42319.1| SpoIIIJ [Symbiobacterium thermophilum IAM 14863] Length = 249 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 60/226 (26%), Positives = 116/226 (51%), Gaps = 23/226 (10%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 ++ + ++ +PM L+ F GN+G+AI+L TV V+++ PL Q S M+ Sbjct: 28 LITSFLVPEWLVQPMTKLLEVFLKWTGNYGLAIILLTVVVRIVILPLTVYQMRSMKRMQE 87 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP + EL++K+K +P + L + ++ LY+ +NP +GC P+L+Q+P+ +A++ V + Sbjct: 88 VQPLMKELQDKYKDNPEK-LNQELMALYQREKVNPFSGCLPLLVQLPILYALFAVFN--- 143 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PP 510 A DPT F + + I+ +SM +Q ++ P Sbjct: 144 ---------------AFDPTK-FNYTYQFLWADLSQRDIP-LAILTVVSMILQQYLTGMP 186 Query: 511 PADKGQAMILNWMPVVFVFALSSFP-AGLIIYWSWSNVISIVQQAV 555 D Q +++ MP++F + + P + +++YW S ++QQA+ Sbjct: 187 TTDPNQRVMMWIMPIMFGWIAFTMPTSSIVLYWVVSTFFGLIQQAI 232 >gi|332296665|ref|YP_004438588.1| membrane protein insertase, YidC/Oxa1 family [Thermodesulfobium narugense DSM 14796] gi|332179768|gb|AEE15457.1| membrane protein insertase, YidC/Oxa1 family [Thermodesulfobium narugense DSM 14796] Length = 214 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 71/233 (30%), Positives = 118/233 (50%), Gaps = 26/233 (11%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 ++ + +F + + + +FG+ I+L T+ ++ L +PL M+ +Q Sbjct: 1 MNSFFSWFDTNVFHPIFYSLLSFLHDFGLVIILITLLIRALLWPLNHISLDQMKKMQKLQ 60 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS--- 450 PKI EL+EK+ +S PQ LQ M+ YK + INP GC P+L+Q+P+ A Y + Sbjct: 61 PKIKELQEKY-KSDPQRLQTEMVAFYKNNKINPFGGCLPMLIQLPILIAFYYFLLSPELK 119 Query: 451 --LEMRH-APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 +E H A + WI D+ DP I P ++ ++ +IQ K+ Sbjct: 120 SIIEQTHSAVNFLWINDITEKDPFY-------------------ILPALLMITTYIQQKI 160 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + AD+ Q +L MP+ F FPAG++IYW+ SN+I I+Q ++M+ H Sbjct: 161 TTNTADRMQRQMLLIMPLFLGFISIQFPAGILIYWNVSNIIGIIQSFIVMRKH 213 >gi|19703356|ref|NP_602918.1| inner membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328798|ref|ZP_06871312.1| stage III sporulation protein J [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|38503076|sp|Q8RHA4|OXAA_FUSNN RecName: Full=Inner membrane protein oxaA gi|19713418|gb|AAL94217.1| Inner membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154133|gb|EFG94937.1| stage III sporulation protein J [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 205 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 60/221 (27%), Positives = 116/221 (52%), Gaps = 22/221 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + L++ VGNFGI+I++ T+ +K++ PL KQ S MK +QP++++ Sbjct: 5 YNLLKQFLAFLLNTTDKYVGNFGISIIIVTILIKIILLPLTLKQDKSMKEMKKLQPELEK 64 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +++K+ Q+L ++LY+ H +NPL GC PIL+Q+P+ FA++ V+ + + Sbjct: 65 IKQKYANDK-QMLNIKTMELYREHKVNPLGGCLPILVQLPILFALFGVLRSGI-IPADSS 122 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W++ LA DP + P++ F+Q K+ + Sbjct: 123 FLWMR-LADPDPFY-------------------VLPVLNGAVSFLQQKLMGTSDNAQMKN 162 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ P++ + P+GL +YW S++I+++QQ IMK Sbjct: 163 MMYVFPIMMIVISYRMPSGLQLYWLTSSLIAVIQQYFIMKK 203 >gi|295425822|ref|ZP_06818503.1| ParB/SpoJ family partitioning protein [Lactobacillus amylolyticus DSM 11664] gi|295064515|gb|EFG55442.1| ParB/SpoJ family partitioning protein [Lactobacillus amylolyticus DSM 11664] Length = 296 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 108/257 (42%), Gaps = 21/257 (8%) Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 P +W + I L+ + N+G+ I++ T+ V+++ PL Sbjct: 43 HQAPVSHTSGNWWDRWIIYYVSAFLLWLAKLMGNNYGVTIIVFTILVRIILLPLNAISIR 102 Query: 385 STANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 S+ M+ IQP++D LR+K+ Q+L + +LYK +NP GC P+L+Q+PV + Sbjct: 103 SSTKMQQIQPQVDALRKKYPGRDTESRQLLSQETNKLYKEAGVNPYTGCLPLLIQLPVMY 162 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 A+Y I + ++ + W+ DL DP I + + + LS Sbjct: 163 ALYMAILRTPQL-QNGHFLWM-DLGKPDPYYIMPILAM---------------VFTFLST 205 Query: 502 FIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +I +P A G + + M ++ F + + +YW SN+ VQ + Sbjct: 206 YISQISTPKSAQNGMTKFMTYGMSIMVGAVAIGFQSAITLYWVISNLFQAVQTFFLQNPI 265 Query: 561 GAEIGLIDRLRSTFSKN 577 + ++ + + Sbjct: 266 KYKREQEAKVTAERERK 282 >gi|256843834|ref|ZP_05549321.1| stage III sporulation protein J [Lactobacillus crispatus 125-2-CHN] gi|256849611|ref|ZP_05555043.1| stage III sporulation protein J [Lactobacillus crispatus MV-1A-US] gi|262046279|ref|ZP_06019242.1| stage III sporulation protein J [Lactobacillus crispatus MV-3A-US] gi|295693884|ref|YP_003602494.1| stage iii sporulation protein j [Lactobacillus crispatus ST1] gi|312984010|ref|ZP_07791358.1| membrane protein OxaA [Lactobacillus crispatus CTV-05] gi|256613739|gb|EEU18941.1| stage III sporulation protein J [Lactobacillus crispatus 125-2-CHN] gi|256713727|gb|EEU28716.1| stage III sporulation protein J [Lactobacillus crispatus MV-1A-US] gi|260573609|gb|EEX30166.1| stage III sporulation protein J [Lactobacillus crispatus MV-3A-US] gi|295031990|emb|CBL51469.1| Stage III sporulation protein J [Lactobacillus crispatus ST1] gi|310894512|gb|EFQ43586.1| membrane protein OxaA [Lactobacillus crispatus CTV-05] Length = 291 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 114/256 (44%), Gaps = 23/256 (8%) Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 A P +W + + ++ + ++G AI++ TV V+++ PL Sbjct: 34 ANGQATPISHTSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTVIVRVILVPLNAI 93 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIP 438 ST M++IQP+I+ELR+K+ + Q+ +LYK +NP GC P+L+Q+P Sbjct: 94 SIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLP 153 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 V +A+Y I + ++ + W+ DL+ DP I + ++ + Sbjct: 154 VMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAMIFTF--------------- 196 Query: 499 LSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 LS +I +P + G ++ + M ++ +F + + +YW SN+ +Q ++ Sbjct: 197 LSTYISQLSTPKSSQNGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQALQTFILQ 256 Query: 558 KMHGAEIGLIDRLRST 573 + + ++ Sbjct: 257 --NPIKYRREQEAKAE 270 >gi|254302384|ref|ZP_04969742.1| inner membrane protein YidC [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322576|gb|EDK87826.1| inner membrane protein YidC [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 205 Score = 128 bits (320), Expect = 3e-27, Method: Composition-based stats. Identities = 62/221 (28%), Positives = 116/221 (52%), Gaps = 22/221 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + L++ VGNFGI+I++ T+ +K+L PL KQ S MK +QP++++ Sbjct: 5 YNLLKQFLAFLLNTTDKYVGNFGISIIIVTILIKILLLPLTLKQDKSMKEMKKLQPELEK 64 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +++K+ Q+L ++LY+ H +NPL GC PIL+Q+P+ FA++ V+ + + Sbjct: 65 IKQKYANDK-QMLNIKTMELYREHKVNPLGGCLPILVQLPILFALFGVLRSGI-IPTDSS 122 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W+K L+ DP I P++ F+Q K+ + Sbjct: 123 FLWMK-LSEPDPFF-------------------ILPVLNGAVSFLQQKLMGTSDNAQMKN 162 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ P++ + P+GL +YW S++I+++QQ IMK Sbjct: 163 MMYVFPIMMIVISYKMPSGLQLYWLTSSLIAVIQQYFIMKK 203 >gi|229917458|ref|YP_002886104.1| 60 kDa inner membrane insertion protein [Exiguobacterium sp. AT1b] gi|229468887|gb|ACQ70659.1| 60 kDa inner membrane insertion protein [Exiguobacterium sp. AT1b] Length = 286 Score = 128 bits (320), Expect = 3e-27, Method: Composition-based stats. Identities = 71/229 (31%), Positives = 112/229 (48%), Gaps = 26/229 (11%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +F + + ++Y +GI+I++ T+ V+LL PL KQ S M+ +Q Sbjct: 41 FWAKYFVWPLAWLLKEVAYLVGGPWQYGISIIIATIIVRLLILPLMIKQTKSMGAMQVLQ 100 Query: 394 PKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ +LREK+ + LQ+ M++LY+ + INPLAGC PIL+Q+P+ FA Y I + Sbjct: 101 PEMLKLREKYSSKDQETQRKLQEEMMKLYQEYQINPLAGCLPILIQMPILFAFYDAIRRT 160 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E+ A + W DL A DPT + PI+ ++ F Q K+S Sbjct: 161 PEIFEA-NFLWF-DLGAPDPTF-------------------VLPILAAILTFAQQKISMA 199 Query: 511 PA--DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + M+L PV+ + PA L +YW +ISI+ IM Sbjct: 200 GQEQNPQLKMMLYIFPVMIFVMSINLPAALSLYWVVGYIISIIVTMAIM 248 >gi|237752891|ref|ZP_04583371.1| inner membrane protein oxaA [Helicobacter winghamensis ATCC BAA-430] gi|229375158|gb|EEO25249.1| inner membrane protein oxaA [Helicobacter winghamensis ATCC BAA-430] Length = 418 Score = 128 bits (320), Expect = 3e-27, Method: Composition-based stats. Identities = 88/441 (19%), Positives = 164/441 (37%), Gaps = 33/441 (7%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 +A+ L+++ + FY +E N + A + Sbjct: 10 SQARIMIAVVLALVFFIPYSYFYQPNSLENNATIVNNDMVKLESTPKAQDVALANVLPTN 69 Query: 63 QALSMSPRV-ELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + S + ++ I I+ G + + L+ +S ++L S Sbjct: 70 MSSEDSAIIATIEAEGFIYKIDKLG-RIAIVELKE--EKYHKDSKPLSLFSNDVASQTNP 126 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 L+ + + + N+ ++ + ++ +P L L+ + K Sbjct: 127 KILEIRFSDSVLNNQALNSPYSASANHLVLTDSPQSLTLTQE----------LNGLKVQK 176 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 ++ N P+ I P N F + ++ + + Sbjct: 177 VLTFYPNGYYKATIKIPQNYIYFVSPGMRPNVENDAYVFKGAIIKEADDTITTIEDGDAQ 236 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKS 301 + L D+Y+ ++F K + D G + Sbjct: 237 GQLNFANAKILAAVDRYYTTLFFNDKGFNATILSNANED-------------PMPFIGGN 283 Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 + G K + + + P ++++G F AKP+F+L+ Y+ GN+G Sbjct: 284 GELVLEGYIGPKNYRLLESID-----PFLTDVVEYGVITFFAKPLFLLLEKLYDFCGNWG 338 Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 AI+L T+ V+++ +PL K VS +K + PK+ EL++K+K PQ LQ M+ LYK Sbjct: 339 WAIILLTLIVRIVLYPLTYKGMVSMQKLKELAPKMKELQQKYKG-EPQKLQVHMMDLYKK 397 Query: 422 HNINPLAGCWPILLQIPVFFA 442 H NP+ GC P+LLQIPVFFA Sbjct: 398 HGANPMGGCLPLLLQIPVFFA 418 >gi|227508124|ref|ZP_03938173.1| inner membrane insertion protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227511149|ref|ZP_03941198.1| inner membrane insertion protein [Lactobacillus buchneri ATCC 11577] gi|227523336|ref|ZP_03953385.1| inner membrane insertion protein [Lactobacillus hilgardii ATCC 8290] gi|227085631|gb|EEI20943.1| inner membrane insertion protein [Lactobacillus buchneri ATCC 11577] gi|227089527|gb|EEI24839.1| inner membrane insertion protein [Lactobacillus hilgardii ATCC 8290] gi|227192353|gb|EEI72420.1| inner membrane insertion protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 278 Score = 128 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 27/262 (10%) Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 P E + + ++ N+G+ I++ T+ V+++ PL Q S Sbjct: 26 NSPITEHSTGIWDGWVVLNFSRAIIWLSKFFSDNYGMGIIIFTILVRIVILPLMIYQTRS 85 Query: 386 TANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 + +QP++ L++K+ Q LQ +LY INPLAGC P+++Q+P+ FA Sbjct: 86 MRKTQEVQPQLKALQKKYSSRDAETMQKLQAEQKKLYAEAGINPLAGCLPMIVQMPILFA 145 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y+ I + +R + + W++ L DP + + P++ +L F Sbjct: 146 LYQAIWRTDILR-SGTFFWLQ-LGHPDP-------------------IFVLPVLAALFTF 184 Query: 503 IQMKMSP--PPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 I ++ P ++ MP+ + S P+ L +YW +N + Q VI Sbjct: 185 ISSWLAMKGQPESNSMTTMMTIGMPIFILIMAVSLPSALSLYWVITNAFQVGQTLVIQNP 244 Query: 560 HGAEIGLIDRLRSTFSKNYNSQ 581 + + Q Sbjct: 245 WKIRREREQKQKEEREHKRAVQ 266 >gi|293380888|ref|ZP_06626924.1| putative stage III sporulation protein J [Lactobacillus crispatus 214-1] gi|290922561|gb|EFD99527.1| putative stage III sporulation protein J [Lactobacillus crispatus 214-1] Length = 291 Score = 128 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 114/256 (44%), Gaps = 23/256 (8%) Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 A P +W + + ++ + ++G AI++ TV V+++ PL Sbjct: 34 ANGQATPISHTSGNWWDRWIVYYMSAFILGLAKLMGNSYGWAIIVFTVIVRVILVPLNAI 93 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIP 438 ST M++IQP+I+ELR+K+ + Q+ +LYK +NP GC P+L+Q+P Sbjct: 94 SIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQQETNKLYKEAGVNPYTGCLPVLIQLP 153 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 V +A+Y I + ++ + W+ DL+ DP I + ++ + Sbjct: 154 VMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYYIMPILAMIFTF--------------- 196 Query: 499 LSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 LS +I +P + G ++ + M ++ +F + + +YW SN+ +Q ++ Sbjct: 197 LSTYISQLSTPKSSQNGMTKVMMYGMSIMVGVMALNFQSAITLYWVISNLFQALQTFILQ 256 Query: 558 KMHGAEIGLIDRLRST 573 + + ++ Sbjct: 257 --NPIKYRREQEAKAE 270 >gi|228993751|ref|ZP_04153656.1| Membrane protein oxaA 2 [Bacillus pseudomycoides DSM 12442] gi|228765962|gb|EEM14611.1| Membrane protein oxaA 2 [Bacillus pseudomycoides DSM 12442] Length = 260 Score = 128 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 33/244 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLT--TVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ P+ +++ + + V I + T+ ++ PLA QY S MK +QP+ Sbjct: 37 WDHYFVYPISLMLQFVAHHVPGGSFGIAIIIITLVIRSAMIPLAVSQYRSQMKMKKMQPQ 96 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 I +L+EK + QK M +L KT NPLAGC P+L+Q+P+F A+Y IS + Sbjct: 97 IQKLKEKHGNVSKDIEKQKQYQKEMSELMKTGGWNPLAGCLPLLIQMPIFSALYYAISRT 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E+R + W+ +L ADP + I PI+ +L+ FIQMK+ Sbjct: 157 EEIR-TSSFLWV-NLGHADPYH-------------------ILPILAALATFIQMKVMQS 195 Query: 511 PADKGQAMILN-----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 G+ + + MP + +F + P+GL++YW N+ +++Q V+ K+ E G Sbjct: 196 NVTPGEQVQMLKVQQFMMPAMILFMGFAAPSGLVLYWITGNIFTMLQTIVLRKVMDREEG 255 Query: 566 LIDR 569 + Sbjct: 256 QLQN 259 >gi|237743156|ref|ZP_04573637.1| inner membrane protein oxaA [Fusobacterium sp. 7_1] gi|256027563|ref|ZP_05441397.1| inner membrane protein [Fusobacterium sp. D11] gi|260495364|ref|ZP_05815491.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_33] gi|289765522|ref|ZP_06524900.1| inner membrane protein [Fusobacterium sp. D11] gi|229433452|gb|EEO43664.1| inner membrane protein oxaA [Fusobacterium sp. 7_1] gi|260197142|gb|EEW94662.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_33] gi|289717077|gb|EFD81089.1| inner membrane protein [Fusobacterium sp. D11] Length = 201 Score = 127 bits (319), Expect = 4e-27, Method: Composition-based stats. Identities = 63/221 (28%), Positives = 117/221 (52%), Gaps = 22/221 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +I + + L++ VGNFGI+I++ T+ +K+L PL KQ S MK +QP++++ Sbjct: 1 MSYIRQFLAFLLNTTDKYVGNFGISIIIVTIIIKILLLPLTLKQDKSMKEMKKLQPELEK 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +++K+ Q+L ++LY+ H +NPL GC PIL+Q+P+ +A++ V+ + + + Sbjct: 61 IKQKYANDK-QMLNIKTMELYREHKVNPLGGCLPILIQLPILWALFGVLRSGIIPKDSS- 118 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W++ LA DP I P++ F+Q K+ + Sbjct: 119 FLWMR-LADPDPFY-------------------ILPVLNGAVSFLQQKLMGTSDNAQMKN 158 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ P++ + P+GL IYW S++I+++QQ IMK Sbjct: 159 MMYVFPIMMIVISYKMPSGLQIYWLTSSLIAVIQQYFIMKK 199 >gi|159040588|ref|YP_001539841.1| 60 kDa inner membrane insertion protein [Salinispora arenicola CNS-205] gi|157919423|gb|ABW00851.1| 60 kDa inner membrane insertion protein [Salinispora arenicola CNS-205] Length = 338 Score = 127 bits (319), Expect = 4e-27, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 32/264 (12%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYVSTANM 389 I W + + + L N+ I+ V V+++ FP+ KQ S M Sbjct: 8 YAISWILLLWHQAWDAIGVPDGAVLGTNWAWILAIIFLVVTVRVILFPVFVKQIKSQRAM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ L+EK K + LQK M++LY+ NPL GC P+ LQIPVF ++ V+ Sbjct: 68 QALQPQVKALQEKHKG-DRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHVLRR 126 Query: 450 ---SLEMRHAPFWGWIKDLAAADPTNIFTLFG----------------ILPFYLPGFMHV 490 + +GW D D ++ LF + + Sbjct: 127 LNPDKPLDKKTLYGWTVD--QFDSASVAKLFTAPIAGKFGSSAEELARLGADGTTVKIMA 184 Query: 491 GIWPIIMSLSMFIQMK----MSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYW 542 GI ++M + ++ + + D Q MI M P + + + FP G+IIYW Sbjct: 185 GILVLVMMGTTYLTSRQMILKTGWAEDPQQRMIQRLMLYGIPASLLISGAIFPIGVIIYW 244 Query: 543 SWSNVISIVQQAVIMKMHGAEIGL 566 +N+ ++ QQ +++ + Sbjct: 245 VTNNMFTLAQQQWVLRKFPPPPNV 268 >gi|308801639|ref|XP_003078133.1| putative PPF-1 protein (ISS) [Ostreococcus tauri] gi|116056584|emb|CAL52873.1| putative PPF-1 protein (ISS) [Ostreococcus tauri] Length = 455 Score = 127 bits (319), Expect = 4e-27, Method: Composition-based stats. Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 20/227 (8%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 ++G +I+L TV VKL FPL+K+Q S+ M+ +QP+I EL+ + P+ LQ + Sbjct: 133 YSYGYSILLLTVLVKLATFPLSKQQVESSIQMQAMQPRIKELQAMYAN-DPERLQLEQAR 191 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLAAADPTNIFTL 476 LY+ NPLAGC P+ +PVF +Y+ +S + E + WI L Sbjct: 192 LYREAGFNPLAGCLPLFATLPVFIGLYRALSNAAAEHLLDDGFYWIPSLGGPTSIAARND 251 Query: 477 FGILPFYLPGFMHVGIW-----------PIIMSLSMFIQMKM---SPPPADKGQAM---I 519 + P P+++ +S F+ + P D Q I Sbjct: 252 GNGFAWLWPFVDGHPPLGWYETGCYLVLPVLLVVSQFVSQTIISPQPKTDDPAQQQSQAI 311 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 L ++P + F + PAGL +YW ++N+I+ Q V+++ I + Sbjct: 312 LKFLPFMIGFFSLNVPAGLTLYWFFNNIITTAQT-VVLRKITKPIEV 357 >gi|330253081|gb|AEC08175.1| inner membrane protein ALBINO3 [Arabidopsis thaliana] Length = 432 Score = 127 bits (318), Expect = 6e-27, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 111/237 (46%), Gaps = 30/237 (12%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ +G AI+L T+ VK +PL K+Q ST M+N+QPKI +++++ + + +Q Sbjct: 135 HVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLE 193 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA-PFWGWIKDLAAADPTNI 473 +LYK +NPLAG + I P S+ R + W+ Sbjct: 194 TSRLYKQAGVNPLAGFFWI----PSLGG-----PTSIAARQSGSGISWL----------F 234 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFV 528 + G P + + P+++ S ++ M++ PP D Q + ++P++ Sbjct: 235 PFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIG 294 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581 + S P+GL IYW +NV+S QQ + K+ GA+ + + + + +K +Q Sbjct: 295 YFALSVPSGLSIYWLTNNVLSTAQQVYLRKLGGAKPNMDENASKIISAGRAKRSIAQ 351 >gi|298246125|ref|ZP_06969931.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter racemifer DSM 44963] gi|297553606|gb|EFH87471.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter racemifer DSM 44963] Length = 353 Score = 127 bits (317), Expect = 6e-27, Method: Composition-based stats. Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 24/243 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + P+F + FY L G+FG+AI++ TV +KLL FPL +Q S+ M+ +QPKI Sbjct: 9 FNIIFSYPIFNGLVVFYRLFGDFGLAIIVLTVLIKLLLFPLTLQQLRSSKAMQVLQPKIA 68 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------SIS 450 E+++K Q AM QLYK + + PLAGC P+++Q+PV + +Y + ++ Sbjct: 69 EIKKKHPG-DVQSQSLAMNQLYKEYGVKPLAGCLPMVIQLPVLYGLYFAVGGILRDQHLT 127 Query: 451 LE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP--GFMHVGIWPIIMSLSMFIQMKM 507 +E + + D + F +++ I PI+ L+ F+ ++M Sbjct: 128 IETLNRELYPFVAPFKGVPDINLRWFEFLNPHWFISLGQPDPTHILPILAGLATFVSLRM 187 Query: 508 -------------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 +P P + + MP V +F +FPAGL +YW+ S++ VQQ Sbjct: 188 AQPRNAQAKKDKSTPDPMVQSMQTMQYVMPFVTIFIGWTFPAGLALYWTVSSIFQAVQQY 247 Query: 555 VIM 557 + Sbjct: 248 FVT 250 >gi|315039282|ref|YP_004032850.1| stage III sporulation protein J [Lactobacillus amylovorus GRL 1112] gi|325957756|ref|YP_004293168.1| stage III sporulation protein J [Lactobacillus acidophilus 30SC] gi|312277415|gb|ADQ60055.1| stage III sporulation protein J [Lactobacillus amylovorus GRL 1112] gi|325334321|gb|ADZ08229.1| stage III sporulation protein J [Lactobacillus acidophilus 30SC] gi|327184389|gb|AEA32836.1| stage III sporulation protein J [Lactobacillus amylovorus GRL 1118] Length = 298 Score = 127 bits (317), Expect = 6e-27, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 21/257 (8%) Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA 379 P +W + + ++ + ++G AI++ TV V+++ PL Sbjct: 39 QGANGQVAPVSHTSGNWWDRWIVYYMSAFILWLAKLMGNSYGWAIIVFTVIVRVILLPLN 98 Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQ 436 ST M++IQP+I+ELR+K+ + Q+ +LYK +NP AGC P+++Q Sbjct: 99 AISIRSTTKMQSIQPQINELRKKYPGRDTESRSLLQQETNKLYKEAGVNPYAGCLPLIIQ 158 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 +PV +A+Y I + ++ + W+ DL+ DP I + + + Sbjct: 159 LPVMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYFIMPILAMAFTF------------- 203 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 LS +I +P + G I+ + M ++ F + + +YW SN+ VQ + Sbjct: 204 --LSTYISQLSTPASSQNGMTKIMTYGMSIMVGVMALQFQSAITLYWVISNLFQAVQTFI 261 Query: 556 IMKMHGAEIGLIDRLRS 572 + + + + Sbjct: 262 LQNPLKYKREQEAKAEA 278 >gi|260584254|ref|ZP_05852001.1| stage III sporulation protein J [Granulicatella elegans ATCC 700633] gi|260157772|gb|EEW92841.1| stage III sporulation protein J [Granulicatella elegans ATCC 700633] Length = 271 Score = 127 bits (317), Expect = 6e-27, Method: Composition-based stats. Identities = 50/222 (22%), Positives = 103/222 (46%), Gaps = 26/222 (11%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 I +++ + ++G+ I++ T+ +++ P+ QY +T +QP+I++LR Sbjct: 38 IIYNLSQFIITLSHIFGNSYGLGIIVFTIITRIVLVPVMHFQYKTTRQTAILQPEINKLR 97 Query: 401 EKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 EK+ Q ++ + LY+ +N AGC P+ +Q+PV A+Y+ IS + ++ Sbjct: 98 EKYSARDHQTQEILREEISALYEREGVNQYAGCLPVAIQLPVMIALYQAISRTEALKTGS 157 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W +L DP I PI++ + + ++ D G A Sbjct: 158 -FLWF-NLDQPDPFF-------------------ILPILVVATTYATSWLTMKMQDSGAA 196 Query: 518 -MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 I+ + +P + F +FP+ L +YW N+ ++Q ++ Sbjct: 197 GKIMLFVLPAMIGFTALTFPSALSLYWVVGNIFMVIQTLIMN 238 >gi|219848108|ref|YP_002462541.1| 60 kDa inner membrane insertion protein [Chloroflexus aggregans DSM 9485] gi|219542367|gb|ACL24105.1| 60 kDa inner membrane insertion protein [Chloroflexus aggregans DSM 9485] Length = 313 Score = 127 bits (317), Expect = 7e-27, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 17/235 (7%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + L+ +F +L GN + I+L T+ +L PL S+ M+ +QP Sbjct: 1 MNIWSAFVGLLEQLLLFFSSLTGNMALGIVLFTIAARLFILPLTLSSLRSSRRMQEVQPI 60 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEM 453 + E++ K+ PQ LQ+ +++Y+ + INP+ GC P+LLQ+P+FF +Y+ + E Sbjct: 61 LKEIQRKY-GKDPQRLQEETLRVYREYKINPVGGCLPLLLQLPIFFGVYQAVYHLMVPEQ 119 Query: 454 R---HAPFWGWIKD------LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 R A +KD L+A + P GF ++ + P++ + +Q Sbjct: 120 RVNLSAAAAEMLKDERLAQILSAPFFGMDLGVPAFGPNGFAGFAYL-VLPVLSIVLQLVQ 178 Query: 505 MKM-SPPPADKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 M +P D Q + MP VF + +FP G ++YW S+VI ++QQ Sbjct: 179 QLMATPRVQDPQQKAFTQAMLIMPFVFGYIAFTFPTGAVLYWVVSSVIGVIQQYF 233 >gi|292669288|ref|ZP_06602714.1| stage III sporulation protein J [Selenomonas noxia ATCC 43541] gi|292649129|gb|EFF67101.1| stage III sporulation protein J [Selenomonas noxia ATCC 43541] Length = 224 Score = 127 bits (317), Expect = 7e-27, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 100/190 (52%), Gaps = 21/190 (11%) Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 + +PL KQ S M+ IQPK+ +++EK+K +P Q+LQ+ +L++ +NPLAGC P+ Sbjct: 49 VTYPLTVKQVKSMKAMQEIQPKMKKIQEKYKNNP-QMLQQKTGELFRNAGVNPLAGCLPL 107 Query: 434 LLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 L+Q+P+ +Y + + A + W+ +++ DP I Sbjct: 108 LVQMPILMGMYYALFNFTFPSAAAAAFFWLPNMSEPDPLY-------------------I 148 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P++ +L+ F+Q KM+ + +++ MP+ + FP+GL++YW NV+ I+Q Sbjct: 149 LPVLSALTTFLQQKMTSTEMNAQMKIMMTVMPLFIGWISLKFPSGLVLYWVTMNVVQIIQ 208 Query: 553 QAVIMKMHGA 562 Q + + G Sbjct: 209 QWWMYRSEGP 218 >gi|290968158|ref|ZP_06559703.1| stage III sporulation protein J family protein [Megasphaera genomosp. type_1 str. 28L] gi|290781833|gb|EFD94416.1| stage III sporulation protein J family protein [Megasphaera genomosp. type_1 str. 28L] Length = 223 Score = 127 bits (317), Expect = 7e-27, Method: Composition-based stats. Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 32/235 (13%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGI-----AIMLTTVFVKLLFFPLAKKQYVSTAN 388 + + M ++Y Y + G AI++ T+ +K + PL KQ S Sbjct: 1 MFAHIISPLTYIMSTFLTYCYTFTQHIGYPSYGAAIIMLTLIIKFILSPLTAKQIKSMQG 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ IQPKI EL++K+K + + LQ+ M +LYK +NPL+GC PI++Q+P +I+ + Sbjct: 61 MQVIQPKIKELQKKYKGN-QKKLQEEMRKLYKETGVNPLSGCLPIIIQMPFLISIFYALR 119 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 H + W+ L + DPT+ + P++ +LS F+ K Sbjct: 120 NYPYDPHFESFLWLPSLGSPDPTH-------------------VLPVLSALSTFLIQKQM 160 Query: 509 PPPA------DKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q I+ MP+ + FP+GL+IYW SNV QQ ++ Sbjct: 161 TGAQVTEGEGQASQQKIMQIVMPLFIGWISWRFPSGLVIYWVLSNVFQWAQQMIM 215 >gi|229082700|ref|ZP_04215147.1| Membrane protein oxaA 1 [Bacillus cereus Rock4-2] gi|228700612|gb|EEL53151.1| Membrane protein oxaA 1 [Bacillus cereus Rock4-2] Length = 178 Score = 127 bits (317), Expect = 7e-27, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 27/184 (14%) Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILL 435 KQ ST M+ +QP++ +L+EK+ Q LQ+ M+QLY+ + +NPLAGC PI + Sbjct: 1 MIKQTKSTKAMQALQPEMVKLKEKYSSKDQATQQKLQQEMMQLYQKNGVNPLAGCLPIFI 60 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+P+ FA Y I + E++ + W DL ADP I P+ Sbjct: 61 QMPILFAFYHAIMRTAEIKQHS-FLWF-DLGHADPFY-------------------ILPV 99 Query: 496 IMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + +++ FIQ K++ + AM+L MP++ + +FPA L +YW N+ I Q Sbjct: 100 VAAITTFIQQKLAMAGTAGQNPQMAMMLWLMPIMILIFAINFPAALSLYWVVGNIFGIAQ 159 Query: 553 QAVI 556 I Sbjct: 160 MYFI 163 >gi|330468742|ref|YP_004406485.1| 60 kDa inner membrane insertion protein [Verrucosispora maris AB-18-032] gi|328811713|gb|AEB45885.1| 60 kDa inner membrane insertion protein [Verrucosispora maris AB-18-032] Length = 300 Score = 126 bits (316), Expect = 8e-27, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 30/234 (12%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 ++ + I+ + V+ + FP+ KQ + M+ +QP+I L+EK K + LQK +++ Sbjct: 41 WSWVLGIVFLVLTVRAVLFPVFVKQIKAQRAMQALQPQIKALQEKHKD-DRETLQKELVE 99 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEMRHAPFWGWIKDLAAADPTNIF 474 LY+ NPL GC P+L+QIPVF ++ V+ S+ +GW + D + Sbjct: 100 LYRAGQANPLMGCLPMLVQIPVFLGLFHVLRHLKPSMPEHMKTLYGWT--VTQFDSASTA 157 Query: 475 TLFG----------------ILPFYLPGFMHVGIWPIIMSLSMFIQMKM----SPPPADK 514 TLFG + + + I +IM + ++ + + D Sbjct: 158 TLFGAPIAANFRSGTQELALLGADGVTVRVVAAILIVIMIATTYLSSRQMILRTGWAEDP 217 Query: 515 GQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q M+ M P+ + + FP G+IIYW +N+ S+ QQ +++ + Sbjct: 218 QQKMMQRLMLYGIPLSLLVSGLIFPIGVIIYWVTTNLFSLGQQTWVLRKYPPPP 271 >gi|259502133|ref|ZP_05745035.1| stage III sporulation protein J [Lactobacillus antri DSM 16041] gi|259169946|gb|EEW54441.1| stage III sporulation protein J [Lactobacillus antri DSM 16041] Length = 281 Score = 126 bits (316), Expect = 8e-27, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 112/250 (44%), Gaps = 27/250 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N G +G+ I++ T+ +++L PLA Q S M+ + P++ Sbjct: 41 WDHYIVYNFSQFIIWLSNHTGGYGMGIIIFTIIIRVLLLPLAFYQTKSMVRMQEVAPQLK 100 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++K+ +Q+ +LYK ++P+A P+++Q+P+ +A+Y+ I + E+R Sbjct: 101 AIQKKYSSRDRDSMMKMQEETQKLYKEAGVHPMASMLPMIVQLPIMWALYQAIWRTPELR 160 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-- 512 H + W++ L DP + P++ ++ F+ +S Sbjct: 161 H-GTFLWLQ-LGHTDPYY-------------------VLPVLAAVFTFVSSWLSMASMPE 199 Query: 513 -DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 + M+ +MP++ F F + + +YW SN +VQ ++ ++ R Sbjct: 200 KNSMTTMMTWFMPIMIFFMALGFSSAITLYWVVSNAFQVVQTLLLQNPFKIRREREEKQR 259 Query: 572 STFSKNYNSQ 581 ++ + Sbjct: 260 VAKARKRKIE 269 >gi|251800247|ref|YP_003014978.1| hypothetical protein Pjdr2_6289 [Paenibacillus sp. JDR-2] gi|247547873|gb|ACT04892.1| 60 kDa inner membrane insertion protein [Paenibacillus sp. JDR-2] Length = 258 Score = 126 bits (316), Expect = 9e-27, Method: Composition-based stats. Identities = 66/227 (29%), Positives = 111/227 (48%), Gaps = 25/227 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + L + G++G+AI+L T+ V+ PL KQY S+ M+ IQP++ E+ Sbjct: 47 NVVYYFALTLDKFADWFNGSYGLAILLITIIVRTAILPLTLKQYRSSKAMQAIQPQMAEI 106 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 ++K K +P Q Q+ ++L++ + +NP+AGC P+L+Q+PVF A+Y I + E+R F Sbjct: 107 KKKHKDNP-QKQQEETMKLFQANKVNPMAGCLPLLVQMPVFMALYNSIYWNPEVRTHEFL 165 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQ 516 G L P+Y PII + + F+Q KM G Sbjct: 166 G-------------LQLGEPGPWYF--------LPIIAAATTFVQSKMMQKQQTQTMPGM 204 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +L PV+ +FP+ L +YW +SN+ +I+Q + + Sbjct: 205 GAMLMIFPVLIFVMALNFPSALPLYWIFSNLYTIIQNYFLYVRSSNK 251 >gi|147772782|emb|CAN71675.1| hypothetical protein VITISV_036218 [Vitis vinifera] Length = 623 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 65/255 (25%), Positives = 114/255 (44%), Gaps = 42/255 (16%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ +G AI+L TV VK FPL KKQ S M+++QP+I +++++ + +Q Sbjct: 174 HVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQRYAG-DQERIQLE 232 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470 +LYK INPLAGC P L IPV+ +Y+ +S + E + WI L+ Sbjct: 233 TARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLSGPTTIAA 292 Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--------- 513 + I LF G P + + P+++ +S +I +++ Sbjct: 293 RQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPMLLIVSQYISVQIMQSSQQWELLGHLKG 352 Query: 514 --------------------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 K + ++P++ + S P+GL +YW +N++S QQ Sbjct: 353 VPKLELETMIGLSQSNDPSLKTSQALTKFLPLMIGYFALSVPSGLSLYWFTNNILSTAQQ 412 Query: 554 AVIMKMHGAEIGLID 568 + K+ GA+I + Sbjct: 413 VWLQKLGGAQIPVKQ 427 >gi|238061909|ref|ZP_04606618.1| inner membrane insertion protein [Micromonospora sp. ATCC 39149] gi|237883720|gb|EEP72548.1| inner membrane insertion protein [Micromonospora sp. ATCC 39149] Length = 327 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 30/256 (11%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYVSTANM 389 I W + + + + + N+ I+ V V+++ FP+ KQ S M Sbjct: 9 YAISWILLTWHSAWDAIGVPVDAVIGTNWAWILAIVFLVVTVRVILFPVFVKQIKSQRAM 68 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ EL+EK K + LQK M++LY+ NPL GC P+ LQIPVF ++ V+ Sbjct: 69 QALQPRVKELQEKHKG-DRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHVLRR 127 Query: 450 -SLEMRHAPFWGWIKDLAAADPTNIFTLFG----------------ILPFYLPGFMHVGI 492 + +GW + D + LF + + GI Sbjct: 128 LDPAKVNKTLYGWTVE--QFDSASSAKLFTAPIAGKFGSTADELARLGANGTTVKVIAGI 185 Query: 493 WPIIMSLSMFIQMK----MSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSW 544 ++M + ++ + + D Q MI M P+ + + + FP G+IIYW Sbjct: 186 LVLVMMGTTYLTSRQMILKTGWAEDPQQKMIQRLMLYGIPLSLLVSGAIFPIGVIIYWVT 245 Query: 545 SNVISIVQQAVIMKMH 560 +N+ ++ QQ +++ + Sbjct: 246 NNLFTLGQQQWVLRKY 261 >gi|312869223|ref|ZP_07729395.1| putative stage III sporulation protein J [Lactobacillus oris PB013-T2-3] gi|311095244|gb|EFQ53516.1| putative stage III sporulation protein J [Lactobacillus oris PB013-T2-3] Length = 269 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 112/250 (44%), Gaps = 27/250 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N G +G+ I++ T+ +++L PLA Q S M+ I P++ Sbjct: 29 WDHYIVYNFSQFIIWLSNHTGGYGMGIIIFTIIIRVLLLPLAFYQTKSMVRMQEITPQLK 88 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++K+ +Q+ +LYK ++P+A P+++Q+P+ +A+Y+ I + E+R Sbjct: 89 AVQKKYSSRDRDSMMKMQEETQKLYKEAGVHPMASMLPMIVQLPIMWALYQAIWRTPELR 148 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-- 512 H + W++ L DP + P++ ++ F+ +S Sbjct: 149 H-GTFLWLQ-LGHTDPYY-------------------VLPVLAAVFTFVSSWLSMASMPE 187 Query: 513 -DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 + M+ +MP++ F F + + +YW SN +VQ ++ ++ R Sbjct: 188 KNSMTTMMTWFMPIMIFFMALGFSSAITLYWVVSNAFQVVQTLLLQNPFKIRREREEKQR 247 Query: 572 STFSKNYNSQ 581 ++ + Sbjct: 248 VEKARKRKIE 257 >gi|223995523|ref|XP_002287435.1| chloroplast membrane protein [Thalassiosira pseudonana CCMP1335] gi|220976551|gb|EED94878.1| chloroplast membrane protein [Thalassiosira pseudonana CCMP1335] Length = 407 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 61/309 (19%), Positives = 116/309 (37%), Gaps = 25/309 (8%) Query: 279 SDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW 338 D H + ++ + + +++ + + G Sbjct: 10 DDIHNLHHLTTIMPSPDQHQVTTLLSQTTTWLSDAAAVADAAKDENSWWESYIQIYKNGL 69 Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + +G++I L T V+ L P + +Q S+ MK ++P + Sbjct: 70 AFVHDNIVDEPLRKLG-FDQTWGVSIFLFTAGVRALLVPFSIQQSKSSEYMKALKPYQQK 128 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAP 457 ++EK+ Q +A+ +L++ NPLAGC QIP+F +Y+ V ++ E R Sbjct: 129 IKEKYTDKNMQ--NRAISKLFEDAQANPLAGCVTSFAQIPIFLGLYRSVTRLAQEGRLDE 186 Query: 458 FWGWIKDLAAA----------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + WI L + + G+ P + + P+++ L M + Sbjct: 187 PFLWIPSLQGPVTAETNYRGTEWLTQGWVDGVPPLSWETTLAFCVMPVLLVLGQSFTMNV 246 Query: 508 SPPPADKGQ-----------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P D Q IL ++P++ F PAGL IYW SN+ ++ Q +I Sbjct: 247 LQQPDDDSQDEETKKQMESTKTILKFLPLMIGFFSLQVPAGLTIYWFTSNLFTVSQSLII 306 Query: 557 MKMHGAEIG 565 + A Sbjct: 307 RGYYAANPP 315 >gi|206970211|ref|ZP_03231164.1| stage III sporulation protein J [Bacillus cereus AH1134] gi|229072507|ref|ZP_04205709.1| Membrane protein oxaA 2 [Bacillus cereus F65185] gi|229082266|ref|ZP_04214729.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-2] gi|229181313|ref|ZP_04308643.1| Membrane protein oxaA 2 [Bacillus cereus 172560W] gi|229193300|ref|ZP_04320251.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 10876] gi|206734788|gb|EDZ51957.1| stage III sporulation protein J [Bacillus cereus AH1134] gi|228590277|gb|EEK48145.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 10876] gi|228602206|gb|EEK59697.1| Membrane protein oxaA 2 [Bacillus cereus 172560W] gi|228700698|gb|EEL53221.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-2] gi|228710483|gb|EEL62456.1| Membrane protein oxaA 2 [Bacillus cereus F65185] Length = 260 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FG+AI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWNHYFVYPISYMIQFVAHHIPGASFGVAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 96 ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 254 >gi|206978224|ref|ZP_03239104.1| stage III sporulation protein J [Bacillus cereus H3081.97] gi|217962498|ref|YP_002341070.1| OxaA-like protein precursor [Bacillus cereus AH187] gi|222098473|ref|YP_002532531.1| oxaa-like protein precursor [Bacillus cereus Q1] gi|206743583|gb|EDZ55010.1| stage III sporulation protein J [Bacillus cereus H3081.97] gi|217066063|gb|ACJ80313.1| stage III sporulation protein J [Bacillus cereus AH187] gi|221242532|gb|ACM15242.1| probable stage III sporulation protein J [Bacillus cereus Q1] Length = 260 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 96 ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMEREE 254 >gi|116671593|ref|YP_832526.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24] gi|116611702|gb|ABK04426.1| 60 kDa inner membrane insertion protein [Arthrobacter sp. FB24] Length = 275 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 25/246 (10%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 M + ++I+ + ++ P+ +Q + M+ +QP Sbjct: 19 VSTIMVGFHDGLAAMGMPAADGWTWTLSIIGLVLVIRAALIPVFLQQVNAQRRMRRLQPD 78 Query: 396 IDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-- 449 + L++K+K Q + + + LYK H +P + C P+L+Q P F A+++V+S Sbjct: 79 LKSLQDKYKGKADQLSRQAMAQEQMALYKKHGTSPFSACLPLLIQAPFFLALFQVLSGIS 138 Query: 450 SLEMRHAPFWGWIKD-LAAADPTNIFTLFGILPF--------YLPGFMHVGIWPIIMSLS 500 S R + + D ++IF L + + + M+ + Sbjct: 139 SAAGRGQGIGTMSHEQVVQFDQSSIFGAPLSASLLHGSGGGDALAVTVLAIVMILAMTAA 198 Query: 501 MFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 F+ K+ PA Q MIL +PV+F FP G++IYW+ SN+ ++ Sbjct: 199 QFLTQKLIMARFASGEAEAGPAMIQQKMILYVLPVIFGAGGIVFPIGVLIYWTVSNLWTL 258 Query: 551 VQQAVI 556 QQ V+ Sbjct: 259 AQQFVV 264 >gi|30023056|ref|NP_834687.1| OxaA-like protein precursor [Bacillus cereus ATCC 14579] gi|229049708|ref|ZP_04194265.1| Membrane protein oxaA 2 [Bacillus cereus AH676] gi|229112464|ref|ZP_04242001.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-15] gi|229130275|ref|ZP_04259234.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-Cer4] gi|38502940|sp|Q815V9|OXAA2_BACCR RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|29898616|gb|AAP11888.1| 60 kDa inner membrane protein YIDC [Bacillus cereus ATCC 14579] gi|228653208|gb|EEL09087.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-Cer4] gi|228670844|gb|EEL26151.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-15] gi|228722621|gb|EEL74009.1| Membrane protein oxaA 2 [Bacillus cereus AH676] gi|326942840|gb|AEA18736.1| OxaA-like protein precursor [Bacillus thuringiensis serovar chinensis CT-43] Length = 260 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 96 ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 254 >gi|331702707|ref|YP_004399666.1| membrane protein oxaA [Lactobacillus buchneri NRRL B-30929] gi|329130050|gb|AEB74603.1| Membrane protein oxaA [Lactobacillus buchneri NRRL B-30929] Length = 278 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 104/258 (40%), Gaps = 27/258 (10%) Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 P + + ++ N+G+ I++ T+ V+++ PL Q S Sbjct: 26 NAPITNHSTGIWDGWVVLNFSRAIIWLSKFFSDNYGMGIIIFTILVRIVILPLMIYQTRS 85 Query: 386 TANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 + +QP++ L++K+ Q LQ +LY INPLAGC P+++Q+P+ FA Sbjct: 86 MRKTQEVQPQLKALQKKYSSRDAETVQKLQAEQKKLYAEAGINPLAGCLPLIVQMPILFA 145 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y+ I + +R + + W++ L DP + PI+ +L F Sbjct: 146 LYQAIWRTHILR-SGTFFWLQ-LGHPDPYF-------------------VLPILAALFTF 184 Query: 503 IQMKMSP--PPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 I ++ P ++ MP + S P+ L +YW +N + Q VI Sbjct: 185 ISSWLAMKGQPESNSMTTMMTVGMPFFILIMAISLPSALSLYWVITNAFQVGQTLVIQNP 244 Query: 560 HGAEIGLIDRLRSTFSKN 577 ++ R K Sbjct: 245 WKIRRERENKQREEREKQ 262 >gi|291165949|gb|EFE27996.1| stage III sporulation protein J [Filifactor alocis ATCC 35896] Length = 243 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 40/254 (15%) Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ML+ Y + N+G+AI+ T+ VKL PL Q S M IQP I ++++K+ + Sbjct: 1 MLLKMIYTVTQNYGLAIIFFTIIVKLAMLPLTLSQNKSMMEMNKIQPLIQDIQKKYPKDK 60 Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF--------- 458 Q + QLYK H +NP+ GC P+L+Q+P+ FA+++ + +E Sbjct: 61 -QKQAELTTQLYKEHGVNPMMGCLPLLVQMPILFALFRALRNPVEYVFGSETLFQVADTS 119 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--------- 509 + W+K+L++ D I GF I+PI+ + + FI KM+ Sbjct: 120 FLWLKNLSSPDIITI-----------GGFAFPFIFPIVAAAATFIDTKMTMLKNDKKKEK 168 Query: 510 ----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 P + Q +L MP++ + SFPAGL IYW+ S + SI Q+ ++ ++ Sbjct: 169 QKDGKQNQPENPGESMQKTMLYMMPLMIFWWGRSFPAGLSIYWAVSTLFSIAQRKIVERI 228 Query: 560 HGAEIGLIDRLRST 573 ++ + Sbjct: 229 SLSKEKGTQAIERR 242 >gi|257057913|ref|YP_003135745.1| preprotein translocase subunit YidC [Saccharomonospora viridis DSM 43017] gi|256587785|gb|ACU98918.1| preprotein translocase subunit YidC [Saccharomonospora viridis DSM 43017] Length = 346 Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 100/270 (37%), Gaps = 33/270 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ ++ + + + I+ T V+ L F Q S Sbjct: 1 MLDFIYYPVSFILWVWHKVFGFVFGEDNAIAWVLGIVFLTFTVRGLLFKPFVNQVRSMRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M++ P++ +++K+ Q + +L + H +NP C PILLQIPVF + V+ Sbjct: 61 MQDFAPEVKRIQKKYAN-DRQRQAMELQRLQREHGVNPFGSCLPILLQIPVFIGLNWVLR 119 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTL--------------FGILPFYLPGFMHVGIWP 494 + ++ D+A+ IF + G + Sbjct: 120 NFRPGAESNYFFDADDVASYVDAQIFGINLGDAINHLGLAGGGGDSGWNWDVAPLAVPLM 179 Query: 495 IIMSLSMFIQMK-----MSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWS 545 I+ ++ + + +P A A++ L P V + FP GL+IYW + Sbjct: 180 IVAGIATHLTARHSVARQNPASATPQTAVMNRLTLYVFPAGVVVFGAFFPIGLLIYWLAN 239 Query: 546 NVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 NV ++ QQ + K E + Sbjct: 240 NVWTLGQQRFVYKKIDKEEEAKRQAAKEKR 269 >gi|311112576|ref|YP_003983798.1| membrane protein OxaA [Rothia dentocariosa ATCC 17931] gi|310944070|gb|ADP40364.1| membrane protein OxaA [Rothia dentocariosa ATCC 17931] Length = 342 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 102/258 (39%), Gaps = 26/258 (10%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F++ + ++F + M + + I+ T+ ++ + PL +Q S M Sbjct: 11 FKLAVSAVLWFFHTIFTSIGMDPSSGFT--WVLCIICLTLVMRAVTIPLFMRQIKSMRGM 68 Query: 390 KNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 +Q I +L+ K+K Q + + + L+K H +P + C PI+ Q P+F +Y+ Sbjct: 69 NAMQGDIAKLQAKYKGKKDQLSRQAMAQEQMALFKKHGTSPFSSCMPIIAQTPIFLGLYQ 128 Query: 446 VISI---SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG-------FMHVGIWPI 495 V+ + + + + IF PG I + Sbjct: 129 VLMGVSGAAANNEDILLLPAELVKQFNEAYIFGSPIFSTMMNPGNGNHTATVAQAIIMIL 188 Query: 496 IMSLSMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 +MS + F K P + Q M++ P++F +FP G++ YW+ S Sbjct: 189 LMSGTQFFIQKQLSAKNISEAAKSSPMFRQQQMMMYVFPLIFAVTGVNFPIGVMYYWTVS 248 Query: 546 NVISIVQQAVIMKMHGAE 563 N ++ QQ +++ + Sbjct: 249 NFWALGQQWWVIRNNPNP 266 >gi|330470829|ref|YP_004408572.1| 60 kDa inner membrane insertion protein [Verrucosispora maris AB-18-032] gi|328813800|gb|AEB47972.1| 60 kDa inner membrane insertion protein [Verrucosispora maris AB-18-032] Length = 325 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 28/260 (10%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYVSTANM 389 I W + + + + L N+ I+ V V+++ FP+ KQ S M Sbjct: 9 YAISWILLAWHSAWDAIGVPETAVLGTNWSWILAIIFLVVTVRVILFPIFVKQIKSQRAM 68 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ L+EK K + LQK M++LY+ NPL GC P+ LQIPVF ++ V+ Sbjct: 69 QALQPQVKALQEKHKG-DRETLQKEMMELYRKEKANPLMGCLPMFLQIPVFLGLFHVLRR 127 Query: 450 ---SLEMRHAPFWGWI--------------KDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 + +GW +A+ + L + + GI Sbjct: 128 LNPDPAKANKDIYGWTVEQFNSASDATLFTAPIASKFGSTAAELAQLGANGTTVKVMAGI 187 Query: 493 WPIIMSLSMFIQMKM----SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSW 544 ++M + ++ + + D Q MI M P+ + + + FP G+IIYW Sbjct: 188 LVLVMMGTTYLTSRQMILKTGWAEDPQQRMIQRLMLYGIPLSLLISGAIFPIGVIIYWVT 247 Query: 545 SNVISIVQQAVIMKMHGAEI 564 +N+ ++ QQ +++ + Sbjct: 248 NNLFTLGQQQWVLRKFPPPV 267 >gi|229175718|ref|ZP_04303224.1| Membrane protein oxaA 2 [Bacillus cereus MM3] gi|228607669|gb|EEK64985.1| Membrane protein oxaA 2 [Bacillus cereus MM3] Length = 260 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 74/242 (30%), Positives = 128/242 (52%), Gaps = 37/242 (15%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 96 ELQKLKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + P ++ Q I+ MP + +F + P+GL++YW N+ ++ Q V+ ++ Sbjct: 195 SNITPGEQVQMLKVQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMER 252 Query: 563 EI 564 E Sbjct: 253 EE 254 >gi|303228587|ref|ZP_07315414.1| putative OxaA-like protein [Veillonella atypica ACS-134-V-Col7a] gi|303230686|ref|ZP_07317436.1| putative OxaA-like protein [Veillonella atypica ACS-049-V-Sch6] gi|302514741|gb|EFL56733.1| putative OxaA-like protein [Veillonella atypica ACS-049-V-Sch6] gi|302516766|gb|EFL58681.1| putative OxaA-like protein [Veillonella atypica ACS-134-V-Col7a] Length = 218 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 104/206 (50%), Gaps = 24/206 (11%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 ++G+AI++ TV +K + PL KQ S M+ +QP++ EL+EK+K PQ LQ M Sbjct: 27 FPSYGVAIIIITVIIKAILAPLTVKQIKSMKAMQELQPRMKELQEKYKN-DPQRLQAEMG 85 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +YK +NPLAGC P+L+Q+P AI+ + + W+ L ADP Sbjct: 86 AMYKEMGVNPLAGCLPLLVQMPFLIAIFYALQGYPYNPEFEHFLWLPSLGEADPYY---- 141 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMK---MSPPPADKGQAMILN-WMPVVFVFALS 532 I P++ +LS ++ + M A Q I+ +MP+ + Sbjct: 142 ---------------ILPVLSALSTWLMSRQTGMGASGAAAQQQKIMQIFMPLFIGYISL 186 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558 +FP+GL+IYW SNV +VQQ I K Sbjct: 187 NFPSGLVIYWIVSNVFQLVQQHFIYK 212 >gi|47567064|ref|ZP_00237781.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus G9241] gi|229158625|ref|ZP_04286683.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 4342] gi|47556382|gb|EAL14716.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Bacillus cereus G9241] gi|228624609|gb|EEK81378.1| Membrane protein oxaA 2 [Bacillus cereus ATCC 4342] Length = 260 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 96 ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 254 >gi|256848509|ref|ZP_05553951.1| cell division protein [Lactobacillus coleohominis 101-4-CHN] gi|256714776|gb|EEU29755.1| cell division protein [Lactobacillus coleohominis 101-4-CHN] Length = 277 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 27/249 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + + N G +G+ I++ T+ ++++ PL Q S M+ + P++ Sbjct: 36 IWDHYIIYNCSRFIIWLSNHFGGYGMGIIIFTIIIRIIILPLMYYQTKSMMRMQELAPEL 95 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +L++K+ Q LQ +LYK +NP A P+++Q+PV +A+Y+ I + + Sbjct: 96 KKLQKKYSSRDRETMQKLQVEQQKLYKEAGVNPFASMLPLIVQLPVMWALYQAIWRTSTL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512 RH + W++ L DP + PI+ +L FI +S Sbjct: 156 RH-GTFLWLQ-LGRPDPYY-------------------VLPILAALFTFISSWLSMASMP 194 Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + + +MP++ F F + + +YW +N +VQ ++ + Sbjct: 195 EKNSMSTAMTWFMPIMIFFMALGFSSAITLYWVVTNAFQVVQTLLLQNPFKIRREREAKQ 254 Query: 571 RSTFSKNYN 579 R+ + Sbjct: 255 RAERQRKNK 263 >gi|228955284|ref|ZP_04117292.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804417|gb|EEM51028.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 262 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FG+AI++ T+ ++ PLA QY S A MK +QP Sbjct: 38 IWNHYFVYPISYMIQFVAHHIPGASFGVAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 98 ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 197 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 256 >gi|257452994|ref|ZP_05618293.1| inner membrane protein [Fusobacterium sp. 3_1_5R] gi|257466625|ref|ZP_05630936.1| inner membrane protein [Fusobacterium gonidiaformans ATCC 25563] gi|315917780|ref|ZP_07914020.1| inner membrane protein oxaA [Fusobacterium gonidiaformans ATCC 25563] gi|317059534|ref|ZP_07924019.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_5R] gi|313685210|gb|EFS22045.1| inner membrane protein oxaA [Fusobacterium sp. 3_1_5R] gi|313691655|gb|EFS28490.1| inner membrane protein oxaA [Fusobacterium gonidiaformans ATCC 25563] Length = 205 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 62/221 (28%), Positives = 113/221 (51%), Gaps = 22/221 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + L+ N+V NFGI+I++ T+ V+++ PL KQ S MK IQP+++ Sbjct: 5 YELLKQLISSLLLSVDNVVQNFGISIIIATIIVRIILLPLTLKQDKSMKAMKKIQPELEI 64 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+EK+ Q+L + ++LY+ H +NP GC P+L+Q+P+ FA++ V+ + + Sbjct: 65 LKEKYGNDK-QLLNQKTMELYQKHKVNPAGGCLPLLVQLPILFALFGVLRGGI-IPEDSK 122 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W++ L DP IF P++ F Q K+ + Sbjct: 123 FLWLE-LTKPDPFYIF-------------------PLLNGAISFFQQKLMGNSDNPQMKN 162 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ P++ +F P GL +YW S++ +++QQ IMK Sbjct: 163 MMYMFPIMMIFISYKMPGGLQLYWLTSSLTAVLQQYFIMKK 203 >gi|284047382|ref|YP_003397722.1| membrane protein insertase, YidC/Oxa1 family [Conexibacter woesei DSM 14684] gi|283951603|gb|ADB54347.1| membrane protein insertase, YidC/Oxa1 family [Conexibacter woesei DSM 14684] Length = 309 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 55/226 (24%), Positives = 110/226 (48%), Gaps = 11/226 (4%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 +L+ + + +G++I+L T+ V+++ PL KQ S ++ + P++ ++ K++ Sbjct: 19 QVLLFFHDTVGTGWGLSIILLTITVRVILLPLTLKQVKSMQRLQLLAPELRRIQAKYRSD 78 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---------SLEMRHAP 457 Q Q+ M++ Y+ + +NPLA C+P+L Q+P F +Y ++ + + Sbjct: 79 K-QRQQQEMMKFYQENRVNPLASCFPLLFQLPFFIGLYYMLRTDLRFDICGQTAKACADA 137 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + A P + LF + + ++ + +S D+ Q Sbjct: 138 TAANFASVGAK-PGSESFLFIPDLTGRATGAVLVVLIVLYVGTQIASGLLSTASMDRNQR 196 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 MI+ +P+VFV + +FPAGL++YW +N +IVQQ ++ K G Sbjct: 197 MIMLGLPIVFVAFIINFPAGLMLYWITTNCWTIVQQLIVRKTVGLP 242 >gi|269129164|ref|YP_003302534.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata DSM 43183] gi|268314122|gb|ACZ00497.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata DSM 43183] Length = 351 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 22/253 (8%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F+ L + ++ + + + + +I+L TVF++LL FPL KQ ++ Sbjct: 1 MFDWLYEIVAWFIVLIHKGLGTIVDPDSGLAWAGSIILLTVFLRLLMFPLFVKQIHASRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ + P+I LR+K+ + Q L + ++++Y+ + NPLAGC P+L+Q+PVF +++V++ Sbjct: 61 MQELSPQIQALRKKY-KHDKQRLNQEVMRVYQENGANPLAGCLPLLVQMPVFIGLFQVLN 119 Query: 449 I-SLEMRHAPFWGWIKDL----------AAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 S +G +L A P +G + V + I Sbjct: 120 GISKAKEGESKYGISPELIHSAQHADIFGAVIPDTFLNAWGDGAWDAVAVTAVAVL--IS 177 Query: 498 SLSMFIQMKMSP---PPADK-----GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 S + F M+ S P D ++ ++ + FP G+++YW SN + Sbjct: 178 STTTFFTMRASMKRQPVMDPDNPMVAAQKMMVFLAPLLGLFGLGFPLGVLLYWMTSNTWT 237 Query: 550 IVQQAVIMKMHGA 562 + QQ I + Sbjct: 238 LAQQHYIYSKYPP 250 >gi|228942189|ref|ZP_04104729.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975118|ref|ZP_04135677.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981757|ref|ZP_04142052.1| Membrane protein oxaA 2 [Bacillus thuringiensis Bt407] gi|228777869|gb|EEM26141.1| Membrane protein oxaA 2 [Bacillus thuringiensis Bt407] gi|228784639|gb|EEM32659.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817523|gb|EEM63608.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 262 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 38 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 98 ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 197 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 256 >gi|218235777|ref|YP_002369825.1| OxaA-like protein precursor [Bacillus cereus B4264] gi|228961262|ref|ZP_04122882.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229147568|ref|ZP_04275914.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST24] gi|229153210|ref|ZP_04281389.1| Membrane protein oxaA 2 [Bacillus cereus m1550] gi|296505459|ref|YP_003667159.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171] gi|218163734|gb|ACK63726.1| stage III sporulation protein J [Bacillus cereus B4264] gi|228630309|gb|EEK86959.1| Membrane protein oxaA 2 [Bacillus cereus m1550] gi|228635893|gb|EEK92377.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST24] gi|228798468|gb|EEM45461.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|296326511|gb|ADH09439.1| OxaA-like protein precursor [Bacillus thuringiensis BMB171] Length = 260 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 96 ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 254 >gi|296271541|ref|YP_003654173.1| 60 kDa inner membrane insertion protein [Thermobispora bispora DSM 43833] gi|296094328|gb|ADG90280.1| 60 kDa inner membrane insertion protein [Thermobispora bispora DSM 43833] Length = 318 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 61/269 (22%), Positives = 107/269 (39%), Gaps = 26/269 (9%) Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 + +P L + + + N+ + I+ TV ++L +PL KQ Sbjct: 1 MDLPFLNWLYTAVAWLITQIHSGYGVVLPADSGLNWALTIITLTVLMRLAIYPLFVKQMR 60 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 S+ ++ + PK+ LRE + Q L + +++Y+ +NPL GC PIL Q P+F +I+ Sbjct: 61 SSRKLQELAPKLQRLRE-TYKHDRQRLAEEQMRVYQEAGVNPLGGCLPILAQSPIFISIF 119 Query: 445 KVISISLEMR---HAPFWGW-----IKDLAAADPTNIFTL------FGILPFYLPGFMHV 490 V+ E R + A P FT FG P + Sbjct: 120 TVLRAIAEDRAVYGMSQALVDSARAAHIIGAPLPATFFTSAADIQKFGADPMTTKIVLAC 179 Query: 491 GIWPIIMSLSMFIQMKMS------PPPADKG--QAMILNWMPVVFVFALSSFPAGLIIYW 542 + I + + F+ ++ S P + Q IL ++ + +FP GLI+YW Sbjct: 180 FVA--ISACTTFLTVRQSVRRSIQQMPDNPMVQQQKILMYVSPLLALFSLNFPLGLILYW 237 Query: 543 SWSNVISIVQQAVIMKMHGAE-IGLIDRL 570 +N+ ++ QQ H I + Sbjct: 238 VTTNLWTLGQQHWYYSRHPMPIIDAKGNV 266 >gi|229142366|ref|ZP_04270885.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST26] gi|228641136|gb|EEK97448.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST26] Length = 262 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 38 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 98 ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 197 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMEREE 256 >gi|301056511|ref|YP_003794722.1| OxaA-like protein precursor [Bacillus anthracis CI] gi|300378680|gb|ADK07584.1| OxaA-like protein precursor [Bacillus cereus biovar anthracis str. CI] Length = 260 Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 130/240 (54%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ + PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSVMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 96 ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 195 SNSTPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 254 >gi|315640360|ref|ZP_07895476.1| stage III sporulation protein J [Enterococcus italicus DSM 15952] gi|315483896|gb|EFU74376.1| stage III sporulation protein J [Enterococcus italicus DSM 15952] Length = 280 Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 32/236 (13%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQK 413 GN GI I+L T+ ++++ PL Q S +++QP++ +L+ ++ Q L++ Sbjct: 56 FGNAGIGIILFTIIIRVILLPLMHFQTKSMRKTQDLQPQLKKLQAQYSSRDTQTQQKLRE 115 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 +LY +N+NP GC P+L+Q+P+ A+++ IS + + W++ L DP Sbjct: 116 ETQKLYAENNVNPYIGCLPLLVQMPILMALWQAISRVPAL-TEGHFLWLQ-LGLKDPYY- 172 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNW-MPVVFVFA 530 I PI+ +L F +S I+ + MP++ +F Sbjct: 173 ------------------ILPILAALFTFASTYLSSMSQVESNASMKIMTFVMPLMILFM 214 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIM-----KMHGAEIGLIDRLRSTFSKNYNSQ 581 + +GL +YW SN ++Q +I + E L+ + + K +Q Sbjct: 215 GVNLASGLSLYWVISNGFQVIQTLLINNPFVIRKEREEAALLAKEKERALKKAKNQ 270 >gi|94266688|ref|ZP_01290363.1| 60 kDa inner membrane insertion protein [delta proteobacterium MLMS-1] gi|93452676|gb|EAT03233.1| 60 kDa inner membrane insertion protein [delta proteobacterium MLMS-1] Length = 121 Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 57/126 (45%), Positives = 82/126 (65%), Gaps = 8/126 (6%) Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +LLQIPVFFA+YKV+ S+E+RHAPF WI DL+A D I F +P + + Sbjct: 1 MLLQIPVFFALYKVLLQSVELRHAPFMLWINDLSAPDRLYIG-------FDIPWLGGIPV 53 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++M+ SMFIQ KM+P AD QA I+ ++P+VF F +F +GL++YW +NV++I Q Sbjct: 54 LTLLMAASMFIQQKMTPI-ADPMQARIMLFLPLVFFFLFLNFASGLVLYWFINNVLTIAQ 112 Query: 553 QAVIMK 558 Q I + Sbjct: 113 QYTIYR 118 >gi|52140514|ref|YP_086317.1| OxaA-like protein precursor [Bacillus cereus E33L] gi|196040458|ref|ZP_03107758.1| stage III sporulation protein J [Bacillus cereus NVH0597-99] gi|51973983|gb|AAU15533.1| probable stage III sporulation protein J [Bacillus cereus E33L] gi|196028590|gb|EDX67197.1| stage III sporulation protein J [Bacillus cereus NVH0597-99] Length = 260 Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 129/240 (53%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 96 ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 195 SNSTPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 254 >gi|49480363|ref|YP_039040.1| OxaA-like protein precursor [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331919|gb|AAT62565.1| probable stage III sporulation protein J [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 260 Score = 125 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 129/240 (53%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 96 ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 195 SNSTPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 254 >gi|116493571|ref|YP_805306.1| preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC 25745] gi|122264965|sp|Q03D58|OXAA_PEDPA RecName: Full=Membrane protein oxaA; Flags: Precursor gi|116103721|gb|ABJ68864.1| Preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC 25745] Length = 279 Score = 125 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 116/249 (46%), Gaps = 29/249 (11%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + ++ GN+G I++ T+ ++++ PL Q +T +QPK+ +L+ Sbjct: 40 IVYNFSRFIIYLSKLFGGNYGWGIIVFTIIIRIIILPLMIYQTRTTMKTAELQPKLKQLQ 99 Query: 401 EKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +K+ Q L++ +LY +NP+AGC P+++Q+PV +A+Y +S + ++ Sbjct: 100 QKYSSRDAESQQKLREEQQKLYAEAGVNPMAGCLPLIIQLPVMYALYAAVSRTQVLK-EG 158 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL----SMFIQMKMSPPPAD 513 + W++ L+ DP I PI+ +L S ++ MK P + Sbjct: 159 TFLWLQ-LSDKDPYF-------------------ILPILAALFTFMSTWLSMKSQPAGSQ 198 Query: 514 KGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 G + + MP+V + +FPA + +YW +N+ + Q +I + +++++ Sbjct: 199 NGMTSAMTFGMPLVILITALNFPAAITLYWVVTNLFQVGQTLIIQNPFKIQKEREEKIQT 258 Query: 573 TFSKNYNSQ 581 +K + Sbjct: 259 EKAKRKAIE 267 >gi|229087531|ref|ZP_04219663.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-44] gi|228695778|gb|EEL48631.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-44] Length = 260 Score = 125 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 114/240 (47%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF--VKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + V I + + V+ PLA QY S MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHVPGASFGIAIIIITLIVRSAMIPLAISQYRSQMKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L+EK + QK M +L K NPLAGC P+L+Q+P+F A+Y IS Sbjct: 96 ELQKLKEKHGDVRKDIEKQKQYQKEMSELMKAGGWNPLAGCLPLLIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + E+R + W+ +L ADP + I PI+ +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPILAALTTFIQMKIMQ 194 Query: 510 PPADKGQAMILN-----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 G+ + + MP + +F + P+GL++YW N+ ++ Q V+ K+ + Sbjct: 195 SNTSAGEQVQMLKIQQIMMPAMILFMGFAAPSGLVLYWVTGNLFTMTQMIVLRKVMERKE 254 >gi|312879852|ref|ZP_07739652.1| membrane protein insertase, YidC/Oxa1 family [Aminomonas paucivorans DSM 12260] gi|310783143|gb|EFQ23541.1| membrane protein insertase, YidC/Oxa1 family [Aminomonas paucivorans DSM 12260] Length = 253 Score = 125 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 67/253 (26%), Positives = 123/253 (48%), Gaps = 24/253 (9%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 M +++FY L ++G+AI+L T+ V++L PL+ KQ +S M+ IQP++ ++EK+ Sbjct: 1 MLGTLNFFYGLTHSYGLAIILLTLAVRVLLHPLSHKQLMSMQRMQKIQPRLKVIQEKYAG 60 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + L + M++LYK + +NP AGC P+L+Q+P+F +Y+V+ + A F G D Sbjct: 61 DKEK-LNQEMMKLYKENGVNPAAGCMPLLVQLPIFILLYRVLMQ-YDFAKATFLGVGLDT 118 Query: 466 AAADPTNIFTLFGILPFYLPGFM-----------------HVGIWPIIMSLSMFIQMKMS 508 +A + + V I +++ + Q ++S Sbjct: 119 SALGALAAAVGMPVKNASFGSVLQGLAAHPEGLMRLDLYGPVVILIVLVGFLTWFQQRLS 178 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 + A + +MP+ F S P G+++YW S+ IS+ QQ +M E+ Sbjct: 179 SAN-NPQMAFLNWFMPLFMSFICLSLPGGVMLYWGSSSFISVAQQWRVMHKAEQEM---- 233 Query: 569 RLRSTFSKNYNSQ 581 +++ T KN + Sbjct: 234 QVKPTLHKNKPEE 246 >gi|229032660|ref|ZP_04188623.1| Membrane protein oxaA 2 [Bacillus cereus AH1271] gi|228728659|gb|EEL79672.1| Membrane protein oxaA 2 [Bacillus cereus AH1271] Length = 260 Score = 125 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAISQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 96 ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMEREE 254 >gi|210624040|ref|ZP_03294157.1| hypothetical protein CLOHIR_02109 [Clostridium hiranonis DSM 13275] gi|210153247|gb|EEA84253.1| hypothetical protein CLOHIR_02109 [Clostridium hiranonis DSM 13275] Length = 235 Score = 125 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 34/242 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 I K ++ Y G++G+AI+L T VKLL PL KQ ST M+ I P+++ Sbjct: 1 MTNLIGKLFGNILGAIYGFTGSYGVAIILFTFLVKLLLMPLTIKQTKSTVAMQEITPRVN 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM---- 453 E++EK+K +P K +++LY+ NINP+AGC P+L+Q P+ ++ ++ + + Sbjct: 61 EIQEKYKNNPE-RQNKEIMELYQRANINPMAGCLPLLIQFPILIGLFNLLKDPVGLGAFA 119 Query: 454 ------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK- 506 + + W+++L D I I+ S FI K Sbjct: 120 SQAAFNQANGQFLWMQNLTNPDT---------------------ILAILSGASAFIMQKI 158 Query: 507 MSPPPADKGQAMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 M+P GQ ++ +M + + FPAGL +YW+ SN+ +I+QQ ++ K A+ Sbjct: 159 MTPKEQVNGQMKMMTYMMAGLSFYWGFIFPAGLTLYWTISNIFAILQQVIVTKPLKAKFE 218 Query: 566 LI 567 Sbjct: 219 AD 220 >gi|324328956|gb|ADY24216.1| OxaA-like protein precursor [Bacillus thuringiensis serovar finitimus YBT-020] Length = 260 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 96 ELQKLKKKYGDVSKNLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMEREE 254 >gi|297592067|gb|ADI46852.1| ALB3_1f [Volvox carteri f. nagariensis] Length = 474 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 61/320 (19%), Positives = 126/320 (39%), Gaps = 22/320 (6%) Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + +LS G Y + P + + A A + D Sbjct: 44 GSEITLLTSHLSAGIPDYLDRADLLPTFSFPLANAGAASESVAAAVTANILSASPTDQRA 103 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + + + + ++ ++G +I+L T+ VK++ +PL K+Q ST Sbjct: 104 GG-WVAPLADVLEQVLYVLKDCLD-LLHVPYSYGYSIILLTLIVKIVTYPLTKQQVESTL 161 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++ ++P++D ++++F + +QK LY+ +NPLAGC P L P+F +Y + Sbjct: 162 AVQALKPRVDLIKDRFGDDKEK-IQKETSILYEQAGVNPLAGCLPTLATTPIFIGLYSSL 220 Query: 448 SISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI-----------WP 494 + + + WI LA + P P Sbjct: 221 TNVANEGLLDTQGFYWIPSLAGPTTLAQRQSGLGTSWLFPLVDGAPAIGWDAAVAYLTLP 280 Query: 495 IIMSLSMFIQMKMSPPPADKG------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 +++ L + + + P +D Q +L +PV+ + + P+GL +Y+ + ++ Sbjct: 281 VLLILVQYASLYSTGPTSDATDVNARLQRALLLGLPVMIGWFALNVPSGLSLYYLSNTIL 340 Query: 549 SIVQQAVIMKMHGAEIGLID 568 S QQ + K+ GA++ + Sbjct: 341 STAQQVYLKKLGGAKVAIKK 360 >gi|229542318|ref|ZP_04431378.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1] gi|229326738|gb|EEN92413.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1] Length = 262 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 34/228 (14%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + ++++ L G++G++I+L T+ ++L PL Q S M+ +QP+I +L Sbjct: 39 YIVYPLSWLIIKAAQFLGGSYGLSIILITIIIRLAILPLNITQLKSAKAMQALQPEIKKL 98 Query: 400 REKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EK+ Q LQ+ M++LY+ ++INP AGC PIL+Q+P+ Y I+ + +R Sbjct: 99 QEKYASKDAVTRQKLQQEMMKLYQEYHINPAAGCLPILIQMPILIGFYHAINRTPAIR-E 157 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP------ 510 + W DL + D + +I ++ F+Q K+ Sbjct: 158 SAFLWF-DLGSVD---------------------YVLAVIAGITTFLQQKVMMSGGNYDA 195 Query: 511 -PADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P K Q ++ W MP++ + P+ L +YW N+ IVQ I Sbjct: 196 NPQMKMQMNMMLWFMPIMIIVIGVGLPSALPLYWIVGNIFMIVQSYFI 243 >gi|229062687|ref|ZP_04199996.1| Membrane protein oxaA 2 [Bacillus cereus AH603] gi|228716657|gb|EEL68354.1| Membrane protein oxaA 2 [Bacillus cereus AH603] Length = 260 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 74/242 (30%), Positives = 127/242 (52%), Gaps = 37/242 (15%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWNHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 96 ELQKLKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + P ++ Q I+ MP + +F + P+GL++YW N+ ++ Q V+ ++ Sbjct: 195 SNVTPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRVMER 252 Query: 563 EI 564 E Sbjct: 253 EE 254 >gi|229163993|ref|ZP_04291932.1| Membrane protein oxaA 2 [Bacillus cereus R309803] gi|228619495|gb|EEK76382.1| Membrane protein oxaA 2 [Bacillus cereus R309803] Length = 260 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 125/242 (51%), Gaps = 37/242 (15%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ V+ PLA QY S MK +QP Sbjct: 36 IWNHYFVYPISYMIQFVAHHIPGASFGIAIIVITLVVRSAMIPLAVSQYRSQMKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L ++ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 96 ELQKLKKKYGDVSKDLEKQKQYQKEMSELMRSGGWNPLAGCWPIFIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + ++ Q I+ MP + +F + P+GL++YW N+ ++ Q V+ K+ Sbjct: 195 SNMASGEQSQMLKVQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMER 252 Query: 563 EI 564 E Sbjct: 253 EE 254 >gi|289422592|ref|ZP_06424435.1| 60 kDa inner membrane insertion protein [Peptostreptococcus anaerobius 653-L] gi|289157164|gb|EFD05786.1| 60 kDa inner membrane insertion protein [Peptostreptococcus anaerobius 653-L] Length = 230 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 36/250 (14%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 IA + +++ + VG++G+AI+L T+ VK++ PL KQ ST M I PKI E++ Sbjct: 4 IANALGLVLKAIHTAVGSYGLAIILFTILVKIILMPLMVKQTKSTFAMSEINPKIKEIQA 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-----SISLEMRHA 456 K+K P+ + + +LYK +INPL+GC P+L+Q+P+ FA++ V E + A Sbjct: 64 KYKN-KPEKQNEEISKLYKESDINPLSGCLPMLVQLPILFALFWVFRDPMKYGVFETKQA 122 Query: 457 -----PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 + W+K L D I I+ +S ++ ++ P Sbjct: 123 FDAANVGFVWVKSLTKPD---------------------YILAILSGVSAYVMQMVT-VP 160 Query: 512 ADKGQ--AMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 D+ Q ++N+M P + +F SFPA L +YW+ SN+ S++Q +I K ++ Sbjct: 161 KDQMQGSMKVMNYMMPALSLFWGFSFPAALTLYWTVSNLFSVLQHKIITKPLKDKLIREK 220 Query: 569 RLRSTFSKNY 578 L++ + Sbjct: 221 ELKANGKISK 230 >gi|237736113|ref|ZP_04566594.1| inner membrane protein YIDC [Fusobacterium mortiferum ATCC 9817] gi|229421824|gb|EEO36871.1| inner membrane protein YIDC [Fusobacterium mortiferum ATCC 9817] Length = 206 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 119/214 (55%), Gaps = 21/214 (9%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + L+ Y+L GNFG+AI+L T+ +K++ PL KQ S +MK +QP+I++++++++ Sbjct: 12 ISALLHLMYSLTGNFGVAIILATIVIKIILLPLTLKQDKSMKSMKVLQPEIEKIKQQYQN 71 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 P+++ + ++LY+ H +NP+ GC P+L+Q+P+ +A++ V+ + + + W++ L Sbjct: 72 -DPKMMNQKTMELYQKHKVNPMGGCLPLLIQLPILWALFGVLRDPVTVPQDSTFLWMQ-L 129 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 DP I PI+ + F+Q K+ + ++ P+ Sbjct: 130 VNPDPYY-------------------ILPILNGVVSFLQQKVMGSSDNPQMKNMMYMFPL 170 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + VF PAGL IYW S+V ++VQQ +IMK Sbjct: 171 MMVFISYKMPAGLQIYWLASSVAAVVQQYLIMKK 204 >gi|240254150|ref|NP_173858.5| ALB4 (ALBINA 4) [Arabidopsis thaliana] gi|223590242|sp|Q9FYL3|ALB31_ARATH RecName: Full=ALBINO3-like protein 1, chloroplastic; AltName: Full=Arabidopsis thaliana envelope membrane integrase; AltName: Full=Protein ALBINA 4; Short=Ath4; AltName: Full=Protein ARTEMIS; Flags: Precursor gi|91680591|emb|CAJ45566.1| Alb protein [Arabidopsis thaliana] gi|332192418|gb|AEE30539.1| ALBINO3-like protein 1 [Arabidopsis thaliana] Length = 499 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 26/274 (9%) Query: 333 LIDWGWFYFIAKPMFMLMSYFY------NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 WF IA M ++ ++ ++G AI+L TV VK FPL KKQ S Sbjct: 91 TQSNDWFSGIANYMETILKVLKDGLSTVHVPYSYGFAIILLTVLVKAATFPLTKKQVESA 150 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 MK++ P+I ++E++ ++ +LYK INPLAGC P L IPV+ +Y+ Sbjct: 151 MAMKSLTPQIKAIQERYAGDQEKIQL-ETARLYKLAGINPLAGCLPTLATIPVWIGLYRA 209 Query: 447 ISI-SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWP 494 +S + E + WI LA + I LF G P P + + P Sbjct: 210 LSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFIEGHPPLGWPDTLAYLVLP 269 Query: 495 IIMSLSMF--IQMKMSPPPADKGQ---AMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 +++ S + IQ+ S D + +P++ + S P+GL +YW +N++S Sbjct: 270 LLLVFSQYLSIQIMQSSQSNDPAMKSSQAVTKLLPLMIGYFALSVPSGLSLYWLTNNILS 329 Query: 550 IVQQAVIMKMHGAE--IGLIDRLRSTFSKNYNSQ 581 QQ + K GA+ + L + K + Sbjct: 330 TAQQVWLQKYGGAKNPVEKFTNLVTKEDKTQQIE 363 >gi|259500780|ref|ZP_05743682.1| SpoIIIJ family protein [Lactobacillus iners DSM 13335] gi|315654127|ref|ZP_07907043.1| SpoIIIJ family protein [Lactobacillus iners ATCC 55195] gi|259167474|gb|EEW51969.1| SpoIIIJ family protein [Lactobacillus iners DSM 13335] gi|315488823|gb|EFU78469.1| SpoIIIJ family protein [Lactobacillus iners ATCC 55195] Length = 296 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 122/301 (40%), Gaps = 32/301 (10%) Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 ++ ++ K I + + + ++P W +I + Sbjct: 6 VSDFLSKKNLKKIIVIATILLISLTITGCVSTSSNGSVPPLSNNSGSFWDRYILYYISSF 65 Query: 350 MSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP- 407 + + ++ N +G +I++ T+ V+++ PL S A +++QP+++ LR+K+ Sbjct: 66 ILWLAAILHNAYGWSIVVFTIIVRVVLLPLNAISIKSMAKQQSLQPEMEALRKKYSDRDA 125 Query: 408 --PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + LQ+ +LYK +NP GC P+L+Q+P+ A+++ I + E+ + W+ DL Sbjct: 126 ETRRKLQEETSKLYKESGVNPYLGCLPMLIQMPIMIALWQAILRTPEL-QNGRFLWM-DL 183 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-----QMKMSPPPADKGQAMIL 520 DP + PI+ ++ FI Q+ + + + Sbjct: 184 GHPDPYM-------------------VMPILAAIFTFIASYIGQLSQAKSSNNAMTKGMT 224 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 MPV S + L +YW SN+ +Q + + + +L+ K + Sbjct: 225 YVMPVFIGVMACSLQSALSLYWVISNLFQAIQTFFLQ--NPIKYYRELKLKQLQEKERKA 282 Query: 581 Q 581 + Sbjct: 283 K 283 >gi|228988273|ref|ZP_04148368.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771445|gb|EEM19916.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 262 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 38 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 98 ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 197 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 256 >gi|229118494|ref|ZP_04247848.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-3] gi|228665064|gb|EEL20552.1| Membrane protein oxaA 2 [Bacillus cereus Rock1-3] Length = 260 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 96 ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 254 >gi|228923750|ref|ZP_04087028.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835879|gb|EEM81242.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 260 Score = 124 bits (310), Expect = 5e-26, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHISGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 96 ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 195 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 254 >gi|229094136|ref|ZP_04225216.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-42] gi|228689239|gb|EEL43060.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-42] Length = 262 Score = 124 bits (310), Expect = 5e-26, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 129/240 (53%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 38 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 98 ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 158 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 197 SNSTPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 256 >gi|42784207|ref|NP_981454.1| OxaA-like protein precursor [Bacillus cereus ATCC 10987] gi|42740138|gb|AAS44062.1| stage III sporulation protein J [Bacillus cereus ATCC 10987] Length = 260 Score = 124 bits (310), Expect = 5e-26, Method: Composition-based stats. Identities = 72/240 (30%), Positives = 126/240 (52%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 96 ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 195 SNITAGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMEREE 254 >gi|228910857|ref|ZP_04074666.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 200] gi|228848808|gb|EEM93653.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 200] Length = 262 Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 38 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 98 ELQKLKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 197 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 256 >gi|218900170|ref|YP_002448581.1| stage III sporulation protein J [Bacillus cereus G9842] gi|218542481|gb|ACK94875.1| stage III sporulation protein J [Bacillus cereus G9842] Length = 260 Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 37/242 (15%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 96 ELQKLKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + P ++ Q I+ MP + +F + P+GL++YW N+ ++ Q V+ K+ Sbjct: 195 SNITPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMER 252 Query: 563 EI 564 E Sbjct: 253 EE 254 >gi|229551109|ref|ZP_04439834.1| stage III sporulation protein [Lactobacillus rhamnosus LMS2-1] gi|229315570|gb|EEN81543.1| stage III sporulation protein [Lactobacillus rhamnosus LMS2-1] Length = 287 Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 21/252 (8%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P E + Y + ++ GN G+ I+ T+ +++L FPL+ S A Sbjct: 38 PVSENSTGFWDRYVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYLSIKSMA 97 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 + I P++ EL++K+ + K +LY + +NP+ GC PI++Q+P A+Y Sbjct: 98 KQQEIAPQLKELQKKYSSKDTETQTKLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALY 157 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + I + + + + W+ +L+ DP I I + +L I Sbjct: 158 QAILRTSSL-QSGTFLWM-NLSQPDPLWIMQ----------------ILATLFTLGTSIL 199 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M+ P + +++ P + + P+ L IYW +N S+VQQ +I Sbjct: 200 SMMAQPTRNSSSWVMMIISPAMIFVFSVTLPSALAIYWVVTNAFSMVQQLLIQNPFKIRR 259 Query: 565 GLIDRLRSTFSK 576 ++ R+ K Sbjct: 260 EREEKARAEKEK 271 >gi|229020261|ref|ZP_04177030.1| Membrane protein oxaA 2 [Bacillus cereus AH1273] gi|229026485|ref|ZP_04182840.1| Membrane protein oxaA 2 [Bacillus cereus AH1272] gi|228734793|gb|EEL85433.1| Membrane protein oxaA 2 [Bacillus cereus AH1272] gi|228741014|gb|EEL91243.1| Membrane protein oxaA 2 [Bacillus cereus AH1273] Length = 262 Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 125/242 (51%), Gaps = 37/242 (15%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ V+ PLA QY S MK +QP Sbjct: 38 IWNHYFVYPISFMIQFVAHHIPGGSFGIAIIVITLVVRSAMIPLAVSQYRSQMKMKKMQP 97 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 98 ELQKLKKKHGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196 Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + P ++ Q I+ MP + +F + P+GL++YW N+ ++ Q V+ K+ Sbjct: 197 SNVTPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMER 254 Query: 563 EI 564 E Sbjct: 255 EE 256 >gi|229014209|ref|ZP_04171330.1| Membrane protein oxaA 2 [Bacillus mycoides DSM 2048] gi|229169740|ref|ZP_04297440.1| Membrane protein oxaA 2 [Bacillus cereus AH621] gi|228613779|gb|EEK70904.1| Membrane protein oxaA 2 [Bacillus cereus AH621] gi|228747163|gb|EEL97045.1| Membrane protein oxaA 2 [Bacillus mycoides DSM 2048] Length = 260 Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 37/242 (15%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWNHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 96 ELQKLKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + P ++ Q I+ MP + +F + P+GL++YW N+ ++ Q V+ K+ Sbjct: 195 SNVTPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMER 252 Query: 563 EI 564 E Sbjct: 253 EE 254 >gi|257878643|ref|ZP_05658296.1| inner membrane protein [Enterococcus faecium 1,230,933] gi|257881309|ref|ZP_05660962.1| inner membrane protein [Enterococcus faecium 1,231,502] gi|257885584|ref|ZP_05665237.1| inner membrane protein [Enterococcus faecium 1,231,501] gi|257890526|ref|ZP_05670179.1| inner membrane protein [Enterococcus faecium 1,231,410] gi|257893101|ref|ZP_05672754.1| inner membrane protein [Enterococcus faecium 1,231,408] gi|258615273|ref|ZP_05713043.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Enterococcus faecium DO] gi|260558224|ref|ZP_05830420.1| inner membrane protein [Enterococcus faecium C68] gi|261206914|ref|ZP_05921603.1| inner membrane protein [Enterococcus faecium TC 6] gi|289566509|ref|ZP_06446933.1| preprotein translocase YidC subunit [Enterococcus faecium D344SRF] gi|293553544|ref|ZP_06674171.1| membrane protein OxaA 1 [Enterococcus faecium E1039] gi|293563248|ref|ZP_06677700.1| membrane protein OxaA 1 [Enterococcus faecium E1162] gi|293569162|ref|ZP_06680468.1| membrane protein OxaA 1 [Enterococcus faecium E1071] gi|294616662|ref|ZP_06696433.1| membrane protein OxaA 1 [Enterococcus faecium E1636] gi|294619742|ref|ZP_06699147.1| membrane protein OxaA 1 [Enterococcus faecium E1679] gi|294623756|ref|ZP_06702584.1| membrane protein OxaA 1 [Enterococcus faecium U0317] gi|314940134|ref|ZP_07847314.1| putative stage III sporulation protein J [Enterococcus faecium TX0133a04] gi|314943035|ref|ZP_07849839.1| putative stage III sporulation protein J [Enterococcus faecium TX0133C] gi|314948153|ref|ZP_07851549.1| putative stage III sporulation protein J [Enterococcus faecium TX0082] gi|314953433|ref|ZP_07856351.1| putative stage III sporulation protein J [Enterococcus faecium TX0133A] gi|314993828|ref|ZP_07859164.1| putative stage III sporulation protein J [Enterococcus faecium TX0133B] gi|314998147|ref|ZP_07863029.1| putative stage III sporulation protein J [Enterococcus faecium TX0133a01] gi|257812871|gb|EEV41629.1| inner membrane protein [Enterococcus faecium 1,230,933] gi|257816967|gb|EEV44295.1| inner membrane protein [Enterococcus faecium 1,231,502] gi|257821440|gb|EEV48570.1| inner membrane protein [Enterococcus faecium 1,231,501] gi|257826886|gb|EEV53512.1| inner membrane protein [Enterococcus faecium 1,231,410] gi|257829480|gb|EEV56087.1| inner membrane protein [Enterococcus faecium 1,231,408] gi|260075398|gb|EEW63704.1| inner membrane protein [Enterococcus faecium C68] gi|260078542|gb|EEW66244.1| inner membrane protein [Enterococcus faecium TC 6] gi|289161718|gb|EFD09594.1| preprotein translocase YidC subunit [Enterococcus faecium D344SRF] gi|291588131|gb|EFF19973.1| membrane protein OxaA 1 [Enterococcus faecium E1071] gi|291590482|gb|EFF22220.1| membrane protein OxaA 1 [Enterococcus faecium E1636] gi|291594012|gb|EFF25481.1| membrane protein OxaA 1 [Enterococcus faecium E1679] gi|291596710|gb|EFF27933.1| membrane protein OxaA 1 [Enterococcus faecium U0317] gi|291602299|gb|EFF32524.1| membrane protein OxaA 1 [Enterococcus faecium E1039] gi|291604787|gb|EFF34269.1| membrane protein OxaA 1 [Enterococcus faecium E1162] gi|313587859|gb|EFR66704.1| putative stage III sporulation protein J [Enterococcus faecium TX0133a01] gi|313591719|gb|EFR70564.1| putative stage III sporulation protein J [Enterococcus faecium TX0133B] gi|313594536|gb|EFR73381.1| putative stage III sporulation protein J [Enterococcus faecium TX0133A] gi|313598235|gb|EFR77080.1| putative stage III sporulation protein J [Enterococcus faecium TX0133C] gi|313640639|gb|EFS05219.1| putative stage III sporulation protein J [Enterococcus faecium TX0133a04] gi|313645407|gb|EFS09987.1| putative stage III sporulation protein J [Enterococcus faecium TX0082] Length = 272 Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 27/207 (13%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQK 413 GN GI I+L T+ ++++ PL Q S + +QPK+ L++++ P+ L++ Sbjct: 53 FGNAGIGIILFTLIIRVILLPLMHFQTKSMRKTQELQPKLKALQQQYSSRDPETQSKLRE 112 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 +LY + +NP AGC P+L+Q+P+ A+++ IS E++ + W+ +L ADPT Sbjct: 113 EQQRLYAENGVNPYAGCLPLLVQMPILMALWQSISRVPELKQ-GHFLWL-NLGNADPTF- 169 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNW-MPVVFVFA 530 I PI+ ++ F +S I+N+ MPV+ + Sbjct: 170 ------------------ILPILAAIFTFASTYLSSMSQIESNASMKIMNFVMPVMILVM 211 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIM 557 + +GL +YW SN +VQ +I Sbjct: 212 GVNLASGLSLYWVVSNAFQVVQTLLIN 238 >gi|229199168|ref|ZP_04325850.1| Membrane protein oxaA 2 [Bacillus cereus m1293] gi|228584311|gb|EEK42447.1| Membrane protein oxaA 2 [Bacillus cereus m1293] Length = 262 Score = 123 bits (308), Expect = 7e-26, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 38 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 98 ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ ++ E Sbjct: 197 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRRIMEREE 256 >gi|224100107|ref|XP_002311746.1| 60 kDa inner membrane protein [Populus trichocarpa] gi|222851566|gb|EEE89113.1| 60 kDa inner membrane protein [Populus trichocarpa] Length = 281 Score = 123 bits (308), Expect = 7e-26, Method: Composition-based stats. Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 18/226 (7%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ +G AI+L TV VK FPL+KKQ S M+++QP+I +++ + + +Q Sbjct: 57 HVPYAYGFAIILLTVLVKAATFPLSKKQVESAMAMRSLQPQIKAVQQLYAG-DQERIQLE 115 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470 +LYK INPLAGC P L IPV+ +Y+ +S + E + WI LA Sbjct: 116 TARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAE 175 Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMF--IQMKMSPPPADKG---QA 517 + I LF G P + + P ++ + + +Q+ S D Sbjct: 176 RQNGSGISWLFPFVDGQPPLGWSDTVAYLVLPAMLVVLQYMSVQIMQSSQSDDPNVKNSQ 235 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 I+ ++P++ + S P+GL +YW +N++S QQ + K+ GA+ Sbjct: 236 AIMKFLPLMIGYFSLSVPSGLSLYWLTNNILSTTQQVWLQKLGGAK 281 >gi|164686450|ref|ZP_02210478.1| hypothetical protein CLOBAR_00015 [Clostridium bartlettii DSM 16795] gi|164604461|gb|EDQ97926.1| hypothetical protein CLOBAR_00015 [Clostridium bartlettii DSM 16795] Length = 254 Score = 123 bits (308), Expect = 7e-26, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 16/231 (6%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 I + +++ + N+VG++ +I++ T+ V+L PL KQ ST M++IQPK+ Sbjct: 1 MLNAIGNFLGVILGFIVNIVGDYAWSIIIFTILVRLCLMPLMIKQIKSTKAMQDIQPKMQ 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E++EK+K P+ Q+ +++LYK INP+AGC P+ +Q+P+ ++ ++ + Sbjct: 61 EIQEKYKN-KPEKQQEELMKLYKDAKINPMAGCLPMFIQLPILMGLFALLRDPVA----- 114 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + A + G L H I+ +S + K S D+ QA Sbjct: 115 -----HGVFATEAAYHAANHGFLWIASVSQTHNLSLGILSGVSAYFMQK-SMATTDESQA 168 Query: 518 MILNWMPVVFVFALSS----FPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 ++ M +V + AGL +YW+ SN+ SI Q ++ A++ Sbjct: 169 QMMKSMTLVMTAMSFWWGYTYEAGLALYWTMSNIFSIAQYYLVTSPLKAKM 219 >gi|299117626|emb|CBN75468.1| Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus siliculosus] Length = 449 Score = 123 bits (308), Expect = 7e-26, Method: Composition-based stats. Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 21/232 (9%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +GI+I+ T+FVK + FPL +Q ST M+ + PK+ EL+ ++ +P + +A+ QLY Sbjct: 136 YGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNP-EAANQAVQQLY 194 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAAD----PTNIF 474 +T N+NPLAGC P L QIP+F ++Y+ + + E + + WI L PT + Sbjct: 195 QTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMM 254 Query: 475 TLF-----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ---------AMIL 520 + G + PII+ ++ I ++ P D Q I+ Sbjct: 255 SWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNIV 314 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 ++P++ + S P+ L +YW +N IS I + A+ +++ Sbjct: 315 KFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFI-RNQIADETGDPNMKA 365 >gi|309807784|ref|ZP_07701716.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 01V1-a] gi|308168886|gb|EFO70972.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 01V1-a] Length = 294 Score = 123 bits (308), Expect = 8e-26, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 114/271 (42%), Gaps = 32/271 (11%) Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPL 378 + ++P W +I + + + ++ N +G +I++ T+ V+++ PL Sbjct: 31 STSSNGSVPPLSNNSGSFWDRYILYYISSFILWLAAILHNAYGWSIVVFTIIVRVVLLPL 90 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILL 435 S A +++QP+++ LR+K+ + LQ+ +LYK +NP GC P+L+ Sbjct: 91 NAISIKSMAKQQSLQPEMEALRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLI 150 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+P+ A+++ I + E+ + W+ DL DP + PI Sbjct: 151 QMPIMIALWQAILRTPEL-QNGRFLWM-DLGHPDPYM-------------------VMPI 189 Query: 496 IMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 + ++ FI Q+ + + + MPV S + L +YW SN+ Sbjct: 190 LAAIFTFIASYIGQLSQAKSSNNAMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQA 249 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +Q + + + +L+ K ++ Sbjct: 250 IQTFFLQ--NPIKYYRELKLKQLQEKERKAK 278 >gi|229076403|ref|ZP_04209368.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-18] gi|229099477|ref|ZP_04230406.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-29] gi|229105635|ref|ZP_04236268.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-28] gi|228677771|gb|EEL32015.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-28] gi|228683973|gb|EEL37922.1| Membrane protein oxaA 2 [Bacillus cereus Rock3-29] gi|228706838|gb|EEL59046.1| Membrane protein oxaA 2 [Bacillus cereus Rock4-18] Length = 262 Score = 123 bits (308), Expect = 8e-26, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 127/240 (52%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 38 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 98 ELQKLKKKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ ++ Q V+ K+ E Sbjct: 197 SNITPGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMEREE 256 >gi|302190769|ref|ZP_07267023.1| stage III sporulation protein J [Lactobacillus iners AB-1] gi|309804034|ref|ZP_07698115.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 11V1-d] gi|312871192|ref|ZP_07731290.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 3008A-a] gi|312872789|ref|ZP_07732854.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2062A-h1] gi|312874783|ref|ZP_07734802.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2053A-b] gi|325913658|ref|ZP_08176020.1| putative stage III sporulation protein J [Lactobacillus iners UPII 60-B] gi|329919822|ref|ZP_08276773.1| putative stage III sporulation protein J [Lactobacillus iners SPIN 1401G] gi|308163802|gb|EFO66068.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 11V1-d] gi|311089528|gb|EFQ47953.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2053A-b] gi|311091831|gb|EFQ50210.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2062A-h1] gi|311093206|gb|EFQ51552.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 3008A-a] gi|325477017|gb|EGC80167.1| putative stage III sporulation protein J [Lactobacillus iners UPII 60-B] gi|328937169|gb|EGG33597.1| putative stage III sporulation protein J [Lactobacillus iners SPIN 1401G] Length = 291 Score = 123 bits (308), Expect = 8e-26, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 114/271 (42%), Gaps = 32/271 (11%) Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPL 378 + ++P W +I + + + ++ N +G +I++ T+ V+++ PL Sbjct: 31 STSSNGSVPPLSNNSGSFWDRYILYYISSFILWLAAILHNAYGWSIVVFTIIVRVVLLPL 90 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILL 435 S A +++QP+++ LR+K+ + LQ+ +LYK +NP GC P+L+ Sbjct: 91 NAISIKSMAKQQSLQPEMEALRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLI 150 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+P+ A+++ I + E+ + W+ DL DP + PI Sbjct: 151 QMPIMIALWQAILRTPEL-QNGRFLWM-DLGHPDPYM-------------------VMPI 189 Query: 496 IMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 + ++ FI Q+ + + + MPV S + L +YW SN+ Sbjct: 190 LAAIFTFIASYIGQLSQAKSSNNAMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQA 249 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +Q + + + +L+ K ++ Sbjct: 250 IQTFFLQ--NPIKYYRELKLKQLQEKERKAK 278 >gi|309804916|ref|ZP_07698978.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 09V1-c] gi|309809716|ref|ZP_07703570.1| putative stage III sporulation protein J [Lactobacillus iners SPIN 2503V10-D] gi|312873301|ref|ZP_07733356.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2052A-d] gi|308165855|gb|EFO68076.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 09V1-c] gi|308169895|gb|EFO71934.1| putative stage III sporulation protein J [Lactobacillus iners SPIN 2503V10-D] gi|311091181|gb|EFQ49570.1| putative stage III sporulation protein J [Lactobacillus iners LEAF 2052A-d] Length = 291 Score = 123 bits (308), Expect = 8e-26, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 114/271 (42%), Gaps = 32/271 (11%) Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPL 378 + ++P W +I + + + ++ N +G +I++ T+ V+++ PL Sbjct: 31 STSSNGSVPPLSNNSGSFWDRYILYYISSFILWLATILHNAYGWSIVVFTIIVRVVLLPL 90 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILL 435 S A +++QP+++ LR+K+ + LQ+ +LYK +NP GC P+L+ Sbjct: 91 NAISIKSMAKQQSLQPEMEALRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLI 150 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+P+ A+++ I + E+ + W+ DL DP + PI Sbjct: 151 QMPIMIALWQAILRTPEL-QNGRFLWM-DLGHPDPYM-------------------VMPI 189 Query: 496 IMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 + ++ FI Q+ + + + MPV S + L +YW SN+ Sbjct: 190 LAAIFTFIASYIGQLSQAKSSNNAMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQA 249 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +Q + + + +L+ K ++ Sbjct: 250 IQTFFLQ--NPIKYYRELKLKQLQEKERKAK 278 >gi|163942740|ref|YP_001647624.1| OxaA-like protein precursor [Bacillus weihenstephanensis KBAB4] gi|163864937|gb|ABY45996.1| 60 kDa inner membrane insertion protein [Bacillus weihenstephanensis KBAB4] Length = 260 Score = 123 bits (308), Expect = 8e-26, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 37/242 (15%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWNHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 96 ELQKLKQKYGDVGKNLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + P ++ Q I+ MP + +F + P+GL++YW N+ ++ Q V+ K+ Sbjct: 195 SNVTPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMER 252 Query: 563 EI 564 E Sbjct: 253 EE 254 >gi|30265065|ref|NP_847442.1| OxaA-like protein precursor [Bacillus anthracis str. Ames] gi|47530571|ref|YP_021920.1| OxaA-like protein precursor [Bacillus anthracis str. 'Ames Ancestor'] gi|49187877|ref|YP_031130.1| OxaA-like protein precursor [Bacillus anthracis str. Sterne] gi|165870877|ref|ZP_02215529.1| stage III sporulation protein J [Bacillus anthracis str. A0488] gi|167634953|ref|ZP_02393271.1| stage III sporulation protein J [Bacillus anthracis str. A0442] gi|167639999|ref|ZP_02398267.1| stage III sporulation protein J [Bacillus anthracis str. A0193] gi|170685875|ref|ZP_02877098.1| stage III sporulation protein J [Bacillus anthracis str. A0465] gi|170707039|ref|ZP_02897496.1| stage III sporulation protein J [Bacillus anthracis str. A0389] gi|177652211|ref|ZP_02934714.1| stage III sporulation protein J [Bacillus anthracis str. A0174] gi|190567249|ref|ZP_03020164.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I] gi|196032983|ref|ZP_03100396.1| stage III sporulation protein J [Bacillus cereus W] gi|218906219|ref|YP_002454053.1| stage III sporulation protein J [Bacillus cereus AH820] gi|227817795|ref|YP_002817804.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684] gi|229601480|ref|YP_002869262.1| stage III sporulation protein J [Bacillus anthracis str. A0248] gi|254687356|ref|ZP_05151213.1| OxaA-like protein precursor [Bacillus anthracis str. CNEVA-9066] gi|254725369|ref|ZP_05187152.1| OxaA-like protein precursor [Bacillus anthracis str. A1055] gi|254733735|ref|ZP_05191451.1| OxaA-like protein precursor [Bacillus anthracis str. Western North America USA6153] gi|254740573|ref|ZP_05198264.1| OxaA-like protein precursor [Bacillus anthracis str. Kruger B] gi|254753165|ref|ZP_05205201.1| OxaA-like protein precursor [Bacillus anthracis str. Vollum] gi|254761508|ref|ZP_05213529.1| OxaA-like protein precursor [Bacillus anthracis str. Australia 94] gi|38502946|sp|Q81XH4|OXAA2_BACAN RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|30259742|gb|AAP28928.1| stage III sporulation protein J [Bacillus anthracis str. Ames] gi|47505719|gb|AAT34395.1| stage III sporulation protein J [Bacillus anthracis str. 'Ames Ancestor'] gi|49181804|gb|AAT57180.1| stage III sporulation protein J [Bacillus anthracis str. Sterne] gi|164713386|gb|EDR18911.1| stage III sporulation protein J [Bacillus anthracis str. A0488] gi|167512080|gb|EDR87458.1| stage III sporulation protein J [Bacillus anthracis str. A0193] gi|167529703|gb|EDR92452.1| stage III sporulation protein J [Bacillus anthracis str. A0442] gi|170128142|gb|EDS97012.1| stage III sporulation protein J [Bacillus anthracis str. A0389] gi|170670339|gb|EDT21079.1| stage III sporulation protein J [Bacillus anthracis str. A0465] gi|172082217|gb|EDT67283.1| stage III sporulation protein J [Bacillus anthracis str. A0174] gi|190561753|gb|EDV15723.1| stage III sporulation protein J [Bacillus anthracis Tsiankovskii-I] gi|195994412|gb|EDX58367.1| stage III sporulation protein J [Bacillus cereus W] gi|218540128|gb|ACK92526.1| stage III sporulation protein J [Bacillus cereus AH820] gi|227006381|gb|ACP16124.1| stage III sporulation protein J [Bacillus anthracis str. CDC 684] gi|229265888|gb|ACQ47525.1| stage III sporulation protein J [Bacillus anthracis str. A0248] Length = 260 Score = 123 bits (308), Expect = 8e-26, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 96 ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 195 SNSTSGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 254 >gi|256391922|ref|YP_003113486.1| hypothetical protein Caci_2731 [Catenulispora acidiphila DSM 44928] gi|256358148|gb|ACU71645.1| 60 kDa inner membrane insertion protein [Catenulispora acidiphila DSM 44928] Length = 334 Score = 123 bits (307), Expect = 9e-26, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 110/263 (41%), Gaps = 30/263 (11%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 +I F + + ++ ++I+ T+ ++ PL +KQ S +M Sbjct: 8 LNPIIWAVSFVMVLWHRVFGAIFGEGSSVSWVLSILFLTITIRAAMIPLFRKQIKSMQHM 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP++ L++K+K Q LQ+ ++LYK + +P A C PIL+Q+P F A+Y+V+S Sbjct: 68 QRLQPQLQALQKKYKLDK-QKLQQETMKLYKDNGTSPFASCIPILVQLPFFTALYRVLSH 126 Query: 450 SLEMR--------HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF----------MHVG 491 + R A A P FT L G + Sbjct: 127 AASGRAVGALSQADATNIQHSTFFGAPIPLRFFTTQTYLNTAANGQFAHTSLVNLRIVAL 186 Query: 492 IWPIIMSLSMFIQMKMS-----------PPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + ++ + S F+ +M P P + Q ++L MPV +F S G+++ Sbjct: 187 VMVVLYAASQFLTQRMMLTKNTNLDNSVPNPMMQSQKIMLYVMPVGMLFFGLSVQIGVVL 246 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 Y +NV +I QQ ++ Sbjct: 247 YLMTTNVWTIGQQFYTLRNSPVP 269 >gi|228917653|ref|ZP_04081195.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228842030|gb|EEM87135.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 262 Score = 123 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 72/239 (30%), Positives = 124/239 (51%), Gaps = 31/239 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP+ Sbjct: 39 WDHYFVYPISFMIQLVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPE 98 Query: 396 IDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS + Sbjct: 99 LQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRT 158 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 159 EEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQS 197 Query: 508 SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 198 NSTSGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 256 >gi|309805916|ref|ZP_07699948.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 03V1-b] gi|325912298|ref|ZP_08174695.1| putative stage III sporulation protein J [Lactobacillus iners UPII 143-D] gi|308167692|gb|EFO69839.1| putative stage III sporulation protein J [Lactobacillus iners LactinV 03V1-b] gi|325475957|gb|EGC79126.1| putative stage III sporulation protein J [Lactobacillus iners UPII 143-D] Length = 291 Score = 123 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 114/271 (42%), Gaps = 32/271 (11%) Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPL 378 + ++P W +I + + + ++ N +G +I++ T+ V+++ PL Sbjct: 31 STSSNGSVPPLSNNSGSFWDRYILYYISSFILWLAAILHNAYGWSIVVFTIIVRVVLLPL 90 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILL 435 S A +++QP+++ LR+K+ + LQ+ +LYK +NP GC P+L+ Sbjct: 91 NAISIKSMAKQQSLQPEMEALRKKYSDRDAETRRKLQEETSKLYKESGVNPYLGCLPMLI 150 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+P+ A+++ I + E+ + W+ DL DP + PI Sbjct: 151 QMPIMIALWQAILRTPEL-QNGRFLWM-DLGHPDPYM-------------------VMPI 189 Query: 496 IMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 + ++ FI Q+ + + + MPV S + L +YW SN+ Sbjct: 190 LAAIFTFIASYIGQLSQAKSSNNAMTKGMTYVMPVFIGVMACSLQSALSLYWVISNLFQA 249 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +Q + + + +L+ K ++ Sbjct: 250 IQTFFLQ--NPIKYYRELKLKQMQEKERKAK 278 >gi|196047512|ref|ZP_03114722.1| stage III sporulation protein J [Bacillus cereus 03BB108] gi|225867005|ref|YP_002752383.1| stage III sporulation protein J [Bacillus cereus 03BB102] gi|196021626|gb|EDX60323.1| stage III sporulation protein J [Bacillus cereus 03BB108] gi|225786361|gb|ACO26578.1| stage III sporulation protein J [Bacillus cereus 03BB102] Length = 260 Score = 123 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 129/240 (53%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 96 ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 195 SNSTPVEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 254 >gi|281412770|ref|YP_003346849.1| membrane protein insertase, YidC/Oxa1 family [Thermotoga naphthophila RKU-10] gi|281373873|gb|ADA67435.1| membrane protein insertase, YidC/Oxa1 family [Thermotoga naphthophila RKU-10] Length = 443 Score = 123 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 73/399 (18%), Positives = 154/399 (38%), Gaps = 32/399 (8%) Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 + + + F ++D T ++ + + + + K+ Sbjct: 59 RKHVFTYGNDGFDVLDEGTPLTVIEEPIVTGVGKVSEGFSDEVSIVYNYGYVKKIFTIKN 118 Query: 229 LVEQKYSDIEK--SSISNFHESNSWLGISDKYWASVFIPSKETSFH-SQFKYLSDGHARY 285 + + + S +D+Y + F + K+ Sbjct: 119 DENYTFFVDIESSKPVEVTVPRVSVDTSTDRYLENYFASFNPGTRTLVLLKHDEGLLFEG 178 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 K + + I+ T A +++ + + IP F W+ + Sbjct: 179 TLKINGQKRFIVFMGPNKRTLIKKAFPEDYDVLIKAL--VKIPGFNK-----WYDPVFYG 231 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + + +L NFG AI+L T+ V+L+ +PL Q S NM+ +QP+I+ +++K+K Sbjct: 232 LVWFFWWLKDLTKNFGWAIVLFTLIVRLILYPLYHAQTKSLINMRKLQPQIEAIKKKYKD 291 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-MRHAPFWGWIKD 464 Q Q+A+++LY+ +NP +GC +L+Q+P+F ++ VI +E ++ + KD Sbjct: 292 PTKQ--QEALLKLYREAGVNPASGCLMLLIQLPIFMLLWSVIRYYVEEFAYSGNFLIWKD 349 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A +N + II ++ + ++ A I M Sbjct: 350 LSAGGFSNNWLFL-----------------IITIVASYYTTLLTSQDARTAWQGI--IMS 390 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 V+F F P+GL +Y++ + +I + K + + Sbjct: 391 VIFPFLFVGLPSGLFLYYATNTLIQLAVTYYTYKRYKIK 429 >gi|229135853|ref|ZP_04264621.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST196] gi|228647593|gb|EEL03660.1| Membrane protein oxaA 2 [Bacillus cereus BDRD-ST196] Length = 262 Score = 123 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 37/242 (15%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 38 IWNHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 98 ELQKLKQKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196 Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + P ++ Q I+ MP + +F + P+GL++YW N+ ++ Q V+ K+ Sbjct: 197 SNVTPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKVMER 254 Query: 563 EI 564 E Sbjct: 255 EE 256 >gi|228968133|ref|ZP_04129137.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|228791568|gb|EEM39166.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar sotto str. T04001] Length = 262 Score = 123 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 37/242 (15%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 38 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 98 ELQKLKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 158 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196 Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + P ++ Q I+ MP + +F + P+GL++YW N+ ++ Q V+ K+ Sbjct: 197 SNITPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMER 254 Query: 563 EI 564 E Sbjct: 255 EE 256 >gi|75764154|ref|ZP_00743733.1| 60 kDa inner membrane protein YIDC [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228903521|ref|ZP_04067644.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 4222] gi|74488358|gb|EAO51995.1| 60 kDa inner membrane protein YIDC [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228856097|gb|EEN00634.1| Membrane protein oxaA 2 [Bacillus thuringiensis IBL 4222] Length = 260 Score = 123 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 37/242 (15%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 36 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 95 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWPI +Q+P+F A+Y IS Sbjct: 96 ELQKLKKKYGDVGKDLEKQKQYQKEMSELMKSGGWNPLAGCWPIFIQMPIFSALYYAISR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 156 TEEIR-TSSFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 194 Query: 508 -SPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + P ++ Q I+ MP + +F + P+GL++YW N+ ++ Q V+ K+ Sbjct: 195 SNITPGEQVQMLKIQQIM--MPAMILFMGFAAPSGLVLYWITGNLFTMTQTIVLRKIMER 252 Query: 563 EI 564 E Sbjct: 253 EE 254 >gi|57901135|gb|AAW57888.1| albino3-like protein [Gonium pectorale] Length = 483 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 20/233 (8%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ +G +I+L T+ VKLL +PL K+Q S ++ ++P+ID ++++F + + K Sbjct: 130 HVPYTYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGDDKDK-VSKE 188 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH--APFWGWIKDLAAADPTN 472 LY+ +NPLAGC P L IP+F +Y ++ A + WI LA Sbjct: 189 TSALYEAAGVNPLAGCLPTLATIPIFIGLYSSLTNVANAGSLDAEGFYWIPSLAGPTTLA 248 Query: 473 IFTLFGILPFYLPGFMHVGI-----------WPIIMSLSMFIQMKMSPPPADK------G 515 + + LP P+ + + ++ PP D Sbjct: 249 MRQSGLGTSWLLPLVDGAPPIGWPEAAAYLSLPVALVAVQYASSALTSPPIDPKDENAGT 308 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 Q +L +P++ + + P+GL +Y+ + V+S Q + K+ GA + + + Sbjct: 309 QRALLVALPLMIGWFSLNVPSGLSLYYLSNTVLSAATQVYLKKLGGANVKMNE 361 >gi|309390347|gb|ADO78227.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium praevalens DSM 2228] Length = 216 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 55/221 (24%), Positives = 108/221 (48%), Gaps = 15/221 (6%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F ++ M + + YN+VGN+G AI++ T+ +K+ +PL KQ S M+ IQP++ Sbjct: 1 MFDWLINGMAYALDFIYNIVGNYGSAIIIFTLLIKIALYPLTAKQTRSMREMQEIQPEMK 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +++ K++ + Q+ M++LY+ H +NP AGC P+++Q+ + +Y+ I + + Sbjct: 61 KIQNKYEDDKEK-QQEEMMKLYQEHGVNPAAGCLPMIVQMAILIPLYRTIFALGDKMASE 119 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI P V + +IM + K+S + Sbjct: 120 AFLWI------------GTITNGSLAEPDIAIVLLNAVIMLGQTHMTQKLS--GGEGKSN 165 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ MP+ +F P+G+++YW S + ++ QQ + K Sbjct: 166 KMMYMMPLFIIFIGFRLPSGVLLYWFTSTLFTVAQQYFLSK 206 >gi|257871385|ref|ZP_05651038.1| inner membrane protein [Enterococcus gallinarum EG2] gi|257805549|gb|EEV34371.1| inner membrane protein [Enterococcus gallinarum EG2] Length = 274 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 29/245 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I + GN GI I+L T+ ++++ PL Q S + +QPK+ Sbjct: 37 WDRYIVYYFAEAIKMLS--FGNAGIGIILFTLIIRIILMPLMHFQTKSMRKTQELQPKLK 94 Query: 398 ELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L++++ + K +LY +N+NP AGC P+L+Q+P+ A+++ IS + Sbjct: 95 ALQQQYASKDSETQNKLRAETQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPAL- 153 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + W++ L DP I PI+ +L F +S + Sbjct: 154 QEGKFLWLQ-LGDRDPYF-------------------ILPILAALFTFASTYLSSMSQIE 193 Query: 515 GQA--MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 A I+N+ MP++ + + +GL +YW SN +VQ ++ + R Sbjct: 194 SNASLKIMNFAMPLMILLMGINIASGLSLYWVVSNAFQVVQTLILNNPFKIRQEREEAAR 253 Query: 572 STFSK 576 + Sbjct: 254 KERER 258 >gi|326692346|ref|ZP_08229351.1| preprotein translocase subunit YidC [Leuconostoc argentinum KCTC 3773] Length = 279 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 99/252 (39%), Gaps = 31/252 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +A ++ N+G+ I++ T+ ++ L PL Q S M+ +QP + Sbjct: 43 WGAIVAAFTSAILGSAAWFGNNYGMGIIIFTILIRFLILPLMVYQVHSMMKMQGVQPALK 102 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L+ K+ Q++ LYK +NP A P+++Q+PV A+Y+ I S ++ Sbjct: 103 ALQAKYPGKDTESRQLMMAEQQALYKEAGVNPFASLLPLIVQMPVLIALYQAIYTSPVLK 162 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + + W++ L + DP + PI+ ++ F +S Sbjct: 163 -SGKFLWLQ-LGSHDPYY-------------------VLPILAAVFTFASSWLSMQST-P 200 Query: 515 GQAMILNWMPVVF-VFALSS---FPAGLIIYWSWSNVISIVQQAVIM--KMHGAEIGLID 568 Q + MP +F V S P+ L +YW NV +Q + E L+ Sbjct: 201 EQNGMTKAMPYIFPVVIFFSAIAVPSALSLYWVVGNVFQTIQTFFLQNPFKIRRERELLK 260 Query: 569 RLRSTFSKNYNS 580 + + Sbjct: 261 QKERELQRKIKK 272 >gi|312897432|ref|ZP_07756856.1| putative OxaA-like protein [Megasphaera micronuciformis F0359] gi|310621493|gb|EFQ05029.1| putative OxaA-like protein [Megasphaera micronuciformis F0359] Length = 217 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 32/232 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGI-----AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 ++ M + Y Y + G AI++ T+ +KL+ PL KQ S M+ +Q Sbjct: 1 MDVLSGIMSTFLDYCYAFTQSVGYPSYGIAIIMLTIIIKLVLSPLTAKQIRSMEGMQLLQ 60 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 PKI EL++K+K + + +Q+ M +LY+ +NPL+GC PIL+Q+P +I+ + Sbjct: 61 PKIKELQKKYKGN-QKKMQEEMSKLYREMGVNPLSGCLPILIQMPFLVSIFYALRSYPYD 119 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-MSPPPA 512 + W+ L D T I P++ +LS F+ K M+ Sbjct: 120 PAYESFLWLSSLGQPDETY-------------------ILPVLSALSTFLIQKQMTGAQP 160 Query: 513 DK-----GQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q I+ MP+ + +FP+GL+IYW SNV QQ ++ + Sbjct: 161 DAEGPQAMQQKIMKVAMPLFIGWISLTFPSGLVIYWIISNVFQGAQQMIMGR 212 >gi|15644210|ref|NP_229260.1| inner membrane protein, putative [Thermotoga maritima MSB8] gi|38503261|sp|Q9X1H2|OXAA_THEMA RecName: Full=Inner membrane protein oxaA gi|4982026|gb|AAD36529.1|AE001797_9 inner membrane protein, putative [Thermotoga maritima MSB8] Length = 445 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 73/399 (18%), Positives = 154/399 (38%), Gaps = 32/399 (8%) Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 + + + F ++D T ++ + + + + K+ Sbjct: 61 RKHVFTYGNDGFDVLDEGTPLTVIEEPIVTGVGKVSEGFSDEVSIVYNYGYVKKIFTIKN 120 Query: 229 LVEQKYSDIEK--SSISNFHESNSWLGISDKYWASVFIPSKETSFH-SQFKYLSDGHARY 285 + + + S +D+Y + F + K+ Sbjct: 121 NENYTFFVDIESSKPVDVTVPRVSVDTSTDRYLENYFASFNPKTRTLVLLKHDEGLLFEG 180 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 K + + I+ T A +++ + + IP F W+ + Sbjct: 181 TLKVNGQKRFIVFMGPNKRTLIKKAFPEDYDVLIKAL--VNIPGFNK-----WYDSVFYG 233 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + + +L NFG AIML T+ V+L+ +PL Q S NM+ +QP+I+ +++K+K Sbjct: 234 LVWFFWWLKDLTKNFGWAIMLFTLIVRLILYPLYHAQTKSLINMRKLQPQIEAIKKKYKD 293 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-MRHAPFWGWIKD 464 Q Q+A+++LY+ +NP +GC +L+Q+P+F ++ VI +E ++ + KD Sbjct: 294 PTKQ--QEALLKLYREAGVNPASGCLMLLIQLPIFMLLWSVIRYYVEEFAYSGSFLIWKD 351 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A +N + +I ++ + ++ A I M Sbjct: 352 LSAGGFSNNWLFL-----------------VITIVASYYTTLLTSQDARTAWQGI--IMS 392 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 V+F F P+GL +Y++ + +I + K + + Sbjct: 393 VIFPFLFVGLPSGLFLYYATNTLIQLAVTYYTYKRYKIK 431 >gi|199598237|ref|ZP_03211658.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001] gi|258509936|ref|YP_003172687.1| stage III sporulation protein J [Lactobacillus rhamnosus GG] gi|199590840|gb|EDY98925.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001] gi|257149863|emb|CAR88836.1| Stage III sporulation protein J [Lactobacillus rhamnosus GG] gi|259651196|dbj|BAI43358.1| preprotein translocase subunit YidC [Lactobacillus rhamnosus GG] Length = 278 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 21/252 (8%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P E + Y + ++ GN G+ I+ T+ +++L FPL+ S A Sbjct: 29 PVSENSTGFWDRYVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYLSIKSMA 88 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 + I P++ EL++K+ + K +LY + +NP+ GC PI++Q+P A+Y Sbjct: 89 KQQEIAPQLKELQKKYSSKDTETQTKLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALY 148 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + I + + + + W+ +L+ DP I I + +L I Sbjct: 149 QAILRTSSL-QSGTFLWM-NLSQPDPLWIMQ----------------ILATLFTLGTSIL 190 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M+ P + +++ P + + P+ L IYW +N S+VQQ +I Sbjct: 191 SMMAQPTRNSSSWVMMIISPAMIFVFSVTLPSALAIYWVVTNAFSMVQQLLIQNPFKIRR 250 Query: 565 GLIDRLRSTFSK 576 ++ R+ K Sbjct: 251 EREEKARAEKEK 262 >gi|228930050|ref|ZP_04093060.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936911|ref|ZP_04099661.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229124560|ref|ZP_04253745.1| Membrane protein oxaA 2 [Bacillus cereus 95/8201] gi|228658900|gb|EEL14555.1| Membrane protein oxaA 2 [Bacillus cereus 95/8201] gi|228822753|gb|EEM68635.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829549|gb|EEM75176.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 262 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 128/240 (53%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 38 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 98 ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 158 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 197 SNSTSGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 256 >gi|148270463|ref|YP_001244923.1| 60 kDa inner membrane insertion protein [Thermotoga petrophila RKU-1] gi|170289142|ref|YP_001739380.1| 60 kDa inner membrane insertion protein [Thermotoga sp. RQ2] gi|147736007|gb|ABQ47347.1| 60 kDa inner membrane insertion protein [Thermotoga petrophila RKU-1] gi|170176645|gb|ACB09697.1| 60 kDa inner membrane insertion protein [Thermotoga sp. RQ2] Length = 443 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 73/399 (18%), Positives = 154/399 (38%), Gaps = 32/399 (8%) Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 + + + F ++D T ++ + + + + K+ Sbjct: 59 RKHVFTYGNDGFDVLDEGTPLTVIEEPIVTGVGKVSEGFSDEVSIVYNYGYVKKIFTIKN 118 Query: 229 LVEQKYSDIEK--SSISNFHESNSWLGISDKYWASVFIPSKETSFH-SQFKYLSDGHARY 285 + + + S +D+Y + F + K+ Sbjct: 119 DENYTFFVDIESSKPVEVTVPRVSVDTSTDRYLENYFASFNPGTRTLVLLKHDEGLLFEG 178 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 K + + I+ T A +++ + + IP F W+ + Sbjct: 179 TLKINGQKRFIVFMGPNKRTLIKKAFPEDYDVLIKAL--VKIPGFNK-----WYDPVFYG 231 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + + +L NFG AI+L T+ V+L+ +PL Q S NM+ +QP+I+ +++K+K Sbjct: 232 LVWFFWWLKDLTKNFGWAIVLFTLIVRLILYPLYHAQTKSLINMRKLQPQIEAIKKKYKD 291 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-MRHAPFWGWIKD 464 Q Q+A+++LY+ +NP +GC +L+Q+P+F ++ VI +E ++ + KD Sbjct: 292 PTKQ--QEALLKLYREAGVNPASGCLMLLIQLPIFMLLWSVIRYYVEEFAYSGNFLIWKD 349 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L+A +N + II ++ + ++ A I M Sbjct: 350 LSAGGFSNNWLFL-----------------IITIVASYYTTLLTSQDARTAWQGI--IMS 390 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 V+F F P+GL +Y++ + +I + K + + Sbjct: 391 VIFPFLFVGLPSGLFLYYATNTLIQLAVTYYTYKRYKIK 429 >gi|118480108|ref|YP_897259.1| OxaA-like protein precursor [Bacillus thuringiensis str. Al Hakam] gi|229187267|ref|ZP_04314412.1| Membrane protein oxaA 2 [Bacillus cereus BGSC 6E1] gi|118419333|gb|ABK87752.1| stage III sporulation protein J [Bacillus thuringiensis str. Al Hakam] gi|228596277|gb|EEK53952.1| Membrane protein oxaA 2 [Bacillus cereus BGSC 6E1] Length = 262 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 129/240 (53%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 38 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 98 ELQKLKQKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 158 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + P ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 197 SNSTPVEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 256 >gi|227893841|ref|ZP_04011646.1| stage III sporulation protein J [Lactobacillus ultunensis DSM 16047] gi|227864330|gb|EEJ71751.1| stage III sporulation protein J [Lactobacillus ultunensis DSM 16047] Length = 291 Score = 122 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 28/258 (10%) Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 P +W + + ++ + ++G AI++ T+ V+++ PL Sbjct: 38 TQGANGHVAPISHTSGNWWDRWIVYYMSAFILWLANLMNNSYGWAIIVFTIIVRVILLPL 97 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVL---QKAMIQLYKTHNINPLAGCWPILL 435 ST M++IQP+I+ELR+K+ + Q+ +LYK +NP GC P+L+ Sbjct: 98 NAISIRSTTKMQSIQPQINELRKKYPGRDTESRTLLQRETNKLYKEAGVNPYTGCLPVLV 157 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+PV +A+Y I + ++ + W+ DL+ DP I PI Sbjct: 158 QLPVMYALYGAILRTPQL-QTGRFLWM-DLSKPDPYF-------------------IMPI 196 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 + F+ +P + G I+ + M ++ F + + +YW SN+ VQ Sbjct: 197 LAMAFTFLS---TPASSQNGMTKIMTYGMSIMVGVMALQFQSAITLYWVISNMFQAVQTF 253 Query: 555 VIMKMHGAEIGLIDRLRS 572 ++ + + + Sbjct: 254 ILQNPIKYKKEQEAKAEA 271 >gi|239616662|ref|YP_002939984.1| 60 kDa inner membrane insertion protein [Kosmotoga olearia TBF 19.5.1] gi|239505493|gb|ACR78980.1| 60 kDa inner membrane insertion protein [Kosmotoga olearia TBF 19.5.1] Length = 445 Score = 122 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 74/390 (18%), Positives = 142/390 (36%), Gaps = 42/390 (10%) Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 L I + + I + + + ++ + + V Y Sbjct: 81 SNGELIPISFSYEEDENGNILVYFFYDSGTKTFVVKNDPYYDFDIILSFSEEITAVSVPY 140 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 + ++ + P K+ + + + S Sbjct: 141 ISEINQKVHP------------NFFITYAKPDKQKTVCISYSEEGRFDVKRFYPNSGRAT 188 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 + + A + + I ++ F +I + + + Y Sbjct: 189 ISAFAGPVKLIHISEAFPEIYEEIKKDLEEFGAIGF--------TSYIFHGLVAFLYWLY 240 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 L +FG AI+L T+ V+L+ +PL Q S M+ +QP+I+++++K+K Q Q+A Sbjct: 241 KLTKSFGWAIILFTIVVRLVLYPLYHLQTKSMIQMRAVQPEIEKIKKKYKDP--QKQQQA 298 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNI 473 + +LY+ NINP GC +L+Q+PVFF +Y VI EM ++P + DL+ Sbjct: 299 LTKLYREKNINPATGCLTLLIQLPVFFVLYAVIRYFGEMFAYSPKFLIWSDLST------ 352 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 + I I+ M + D A V+F F S Sbjct: 353 --------GGFVINLPFIIITILAGFYMSLF-----TSQDPRAARQGMIFNVMFPFLFYS 399 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 FP+GL +Y++ + VI ++ + + G + Sbjct: 400 FPSGLFLYYTTNTVIQMLITIYVYRKFGIK 429 >gi|313885423|ref|ZP_07819173.1| stage III sporulation protein J [Eremococcus coleocola ACS-139-V-Col8] gi|312619153|gb|EFR30592.1| stage III sporulation protein J [Eremococcus coleocola ACS-139-V-Col8] Length = 277 Score = 122 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 116/260 (44%), Gaps = 25/260 (9%) Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 P + + Y + ++ GN+ I I++ TV ++++ P+ K Q S Sbjct: 27 NAPLSQDSTGFWDRYILYYLSQFIIWLSDLFGGNYAIGIIIFTVIIRVILLPVTKMQIES 86 Query: 386 TANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 M+ IQP++ L+EK+ +++Q ++ + +++N AGC P+L+Q+PV A Sbjct: 87 QRKMQEIQPELSRLKEKYPNRDAASMEMMQAEQKEIMEKNDVNQFAGCLPLLIQLPVLMA 146 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y+ I + E+ + ++ W L DP I + I ++ + + Sbjct: 147 LYQTIQRTTEI-NQGYFLW-TSLGQRDPYFILPI---------------IAALLTFATSY 189 Query: 503 IQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + MK P Q I+ + MP++ +F S PA L +YW +N ++ Q V+ + Sbjct: 190 LSMKAQPEKNSSMQ--IMLFTMPLMILFIGISLPAALSLYWVVTNAFTVAQTLVLN--NP 245 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 +I + + K Q Sbjct: 246 YKIIAERQAKKDAEKEKQRQ 265 >gi|228948751|ref|ZP_04111028.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810883|gb|EEM57227.1| Membrane protein oxaA 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 262 Score = 122 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 129/240 (53%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + +FGIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 38 IWDHYFVYPISFMIQFVAHHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++K+ + + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 98 ELQKLKQKYGEVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 158 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 197 SNSTSGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 256 >gi|330718059|ref|ZP_08312659.1| membrane protein OxaA [Leuconostoc fallax KCTC 3537] Length = 279 Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 29/250 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W F+A ++ + N+G I++ T+ V+LL PL S M+ +QPK+ Sbjct: 42 IWNAFVAAFTSSILGMAHWFGSNYGWGIVVFTIMVRLLILPLMVFSIGSMMKMQVVQPKL 101 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+ K+ Q++ LYK +NP A P+++Q+P+ A+Y+ IS S E+ Sbjct: 102 KALQAKYPGKDTESRQLMMAEQQALYKEAGVNPFASFLPLIVQMPILIALYQAISSSQEL 161 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + + W+ L DP I PI+ ++ F +S + Sbjct: 162 R-SGEFLWLA-LGNRDPYF-------------------ILPILAAVFTFASSWLSMQS-N 199 Query: 514 KGQAMILNWMPVVF-VFALSS---FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 Q+ + +MP +F V S P+ L +YW SN Q V + + Sbjct: 200 PDQSGVTKFMPYIFPVVIFFSALAVPSALSLYWVVSNAFQTAQTLVYQNPFKIKREREIK 259 Query: 570 LRSTFSKNYN 579 L + Sbjct: 260 LAAEKRMQRK 269 >gi|323455292|gb|EGB11161.1| hypothetical protein AURANDRAFT_22501 [Aureococcus anophagefferens] Length = 366 Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 106/209 (50%), Gaps = 16/209 (7%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 ++GI+I+L T F++ + +PL Y ST K ++P +D++++++ Q + A + Sbjct: 66 NSWGISIILFTAFLRTVIYPLNFISYESTERNKALKPYMDKIKDRY-GEDQQAVNLATAK 124 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAPFWGWIKDLAAA--DP---- 470 LY+ NPLAGC P + QIPVF A+Y+ V++++ + + + ++ +L D Sbjct: 125 LYEMTETNPLAGCLPAIAQIPVFIALYRSVLNLAFDQKIGEGFFFVPNLEGPTYDNGRGI 184 Query: 471 --TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MILNW 522 + G+ + P+ + ++ I M++ PP D +L + Sbjct: 185 QWLTDNWVDGVPSLGWHDTLAFLALPVALVITQSISMRVLTPPPDPNDKSAQNANRVLKY 244 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIV 551 +P++ + ++ P+GL +YW SNV S+ Sbjct: 245 LPLMIGWFSANVPSGLGLYWMTSNVFSVA 273 >gi|269926527|ref|YP_003323150.1| 60 kDa inner membrane insertion protein [Thermobaculum terrenum ATCC BAA-798] gi|269790187|gb|ACZ42328.1| 60 kDa inner membrane insertion protein [Thermobaculum terrenum ATCC BAA-798] Length = 342 Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 106/226 (46%), Gaps = 29/226 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + + +F L G+ +AI+L T+ +KL+ PL+ ++ + I P I + Sbjct: 6 WNALIQLITDGLLFFQGLTGSTALAIILFTILIKLILLPLSLPSLRNSRKQQQIAPLIKQ 65 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + +K + + LY+ + INP++GC P+L+Q P+F A+++ I + Sbjct: 66 IYKKH-GKDRAAISAETMALYQQYGINPMSGCLPLLIQFPIFLALWRAIIHLSTGSNVGG 124 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--- 515 WI +LA D + P + +L+ ++Q +M+ P D+ Sbjct: 125 LLWIDNLARPDH---------------------VLPFLAALAQWLQTRMAMQPKDQIIDP 163 Query: 516 QAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q ++ MP++ +F + AG ++YW S++ S VQQ + Sbjct: 164 QQRSMNSMMQIMPLMVIFIGWNIAAGAVLYWFVSSLFSAVQQYFVT 209 >gi|227518112|ref|ZP_03948161.1| stage III sporulation protein J precursor [Enterococcus faecalis TX0104] gi|229547133|ref|ZP_04435858.1| stage III sporulation protein J precursor [Enterococcus faecalis TX1322] gi|229550703|ref|ZP_04439428.1| stage III sporulation protein J precursor [Enterococcus faecalis ATCC 29200] gi|293382666|ref|ZP_06628594.1| stage III sporulation protein J [Enterococcus faecalis R712] gi|293387922|ref|ZP_06632458.1| stage III sporulation protein J [Enterococcus faecalis S613] gi|307268912|ref|ZP_07550276.1| putative stage III sporulation protein J [Enterococcus faecalis TX4248] gi|307274008|ref|ZP_07555218.1| putative stage III sporulation protein J [Enterococcus faecalis TX0855] gi|307276503|ref|ZP_07557623.1| putative stage III sporulation protein J [Enterococcus faecalis TX2134] gi|307284055|ref|ZP_07564225.1| putative stage III sporulation protein J [Enterococcus faecalis TX0860] gi|307287186|ref|ZP_07567257.1| putative stage III sporulation protein J [Enterococcus faecalis TX0109] gi|307296586|ref|ZP_07576406.1| putative stage III sporulation protein J [Enterococcus faecalis TX0411] gi|312901300|ref|ZP_07760583.1| putative stage III sporulation protein J [Enterococcus faecalis TX0470] gi|312908818|ref|ZP_07767757.1| putative stage III sporulation protein J [Enterococcus faecalis DAPTO 512] gi|312951724|ref|ZP_07770618.1| putative stage III sporulation protein J [Enterococcus faecalis TX0102] gi|312979540|ref|ZP_07791222.1| putative stage III sporulation protein J [Enterococcus faecalis DAPTO 516] gi|227074446|gb|EEI12409.1| stage III sporulation protein J precursor [Enterococcus faecalis TX0104] gi|229304136|gb|EEN70132.1| stage III sporulation protein J precursor [Enterococcus faecalis ATCC 29200] gi|229307715|gb|EEN73702.1| stage III sporulation protein J precursor [Enterococcus faecalis TX1322] gi|291079972|gb|EFE17336.1| stage III sporulation protein J [Enterococcus faecalis R712] gi|291082659|gb|EFE19622.1| stage III sporulation protein J [Enterococcus faecalis S613] gi|306495922|gb|EFM65510.1| putative stage III sporulation protein J [Enterococcus faecalis TX0411] gi|306501784|gb|EFM71075.1| putative stage III sporulation protein J [Enterococcus faecalis TX0109] gi|306503426|gb|EFM72675.1| putative stage III sporulation protein J [Enterococcus faecalis TX0860] gi|306506830|gb|EFM75980.1| putative stage III sporulation protein J [Enterococcus faecalis TX2134] gi|306509316|gb|EFM78376.1| putative stage III sporulation protein J [Enterococcus faecalis TX0855] gi|306514720|gb|EFM83271.1| putative stage III sporulation protein J [Enterococcus faecalis TX4248] gi|310625256|gb|EFQ08539.1| putative stage III sporulation protein J [Enterococcus faecalis DAPTO 512] gi|310630297|gb|EFQ13580.1| putative stage III sporulation protein J [Enterococcus faecalis TX0102] gi|311287722|gb|EFQ66278.1| putative stage III sporulation protein J [Enterococcus faecalis DAPTO 516] gi|311291677|gb|EFQ70233.1| putative stage III sporulation protein J [Enterococcus faecalis TX0470] gi|315030126|gb|EFT42058.1| putative stage III sporulation protein J [Enterococcus faecalis TX4000] gi|315033561|gb|EFT45493.1| putative stage III sporulation protein J [Enterococcus faecalis TX0017] gi|315036384|gb|EFT48316.1| putative stage III sporulation protein J [Enterococcus faecalis TX0027] gi|315143599|gb|EFT87615.1| putative stage III sporulation protein J [Enterococcus faecalis TX2141] gi|315148263|gb|EFT92279.1| putative stage III sporulation protein J [Enterococcus faecalis TX4244] gi|315151287|gb|EFT95303.1| putative stage III sporulation protein J [Enterococcus faecalis TX0012] gi|315153713|gb|EFT97729.1| putative stage III sporulation protein J [Enterococcus faecalis TX0031] gi|315155127|gb|EFT99143.1| putative stage III sporulation protein J [Enterococcus faecalis TX0043] gi|315158743|gb|EFU02760.1| putative stage III sporulation protein J [Enterococcus faecalis TX0312] gi|315165732|gb|EFU09749.1| putative stage III sporulation protein J [Enterococcus faecalis TX1302] gi|315168216|gb|EFU12233.1| putative stage III sporulation protein J [Enterococcus faecalis TX1341] gi|315170517|gb|EFU14534.1| putative stage III sporulation protein J [Enterococcus faecalis TX1342] gi|315174186|gb|EFU18203.1| putative stage III sporulation protein J [Enterococcus faecalis TX1346] gi|315573995|gb|EFU86186.1| putative stage III sporulation protein J [Enterococcus faecalis TX0309B] gi|315581946|gb|EFU94137.1| putative stage III sporulation protein J [Enterococcus faecalis TX0309A] gi|329576312|gb|EGG57827.1| putative stage III sporulation protein J [Enterococcus faecalis TX1467] Length = 266 Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 28/251 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + L G+ GI I+L T+ ++++ PL Q S + +QP++ Sbjct: 26 IWDRYIVYYFAQAIKFLS-LGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQL 84 Query: 397 DELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ P+ + + +LY +N+NP GC P+L+Q+P+ A+Y+ IS E+ Sbjct: 85 KALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPEL 144 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + + W+ L DP I PI+ ++ F +S Sbjct: 145 K-EGTFLWLS-LDKPDPY-------------------LILPILAAVFTFASTYLSSMSQL 183 Query: 514 KGQA--MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + A I+N+ MP + F S + L +YW SN Q ++ + Sbjct: 184 ETNASLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTGQTLLLNNPFKIRKEREEAA 243 Query: 571 RSTFSKNYNSQ 581 R ++ + Sbjct: 244 RQAKARERALE 254 >gi|221195222|ref|ZP_03568278.1| 60 kDa inner membrane insertion protein [Atopobium rimae ATCC 49626] gi|221185125|gb|EEE17516.1| 60 kDa inner membrane insertion protein [Atopobium rimae ATCC 49626] Length = 252 Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats. Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 13/226 (5%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +I + ++S G++G+A+++ TV ++LL PL KQ S A M+ +QPK+ Sbjct: 1 MWDWIINLLTSILSGIQGFCGDWGLAVIILTVIIRLLLVPLTNKQTASMARMQVVQPKLK 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+++++ P Q+ M +LY NPL GC PI LQ+P+FFA++ V H Sbjct: 61 EIQDRYADDPV-RQQEEMRKLYAEIKFNPLGGCLPIFLQMPIFFALFTVARNVP---HDA 116 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADK 514 + I A+ P +F G + G + ++ I+ + FI M M+ K Sbjct: 117 HFYGILSSIASSPAEVFASSG-----ITGVIPYLVFVILFGVLTFIPMMMNANNGASEQK 171 Query: 515 GQAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q M++ M +V ++ + PA +++Y+ S++ ++QQ +I Sbjct: 172 QQQMLMGGMMSLVMLWFGWTVPAAVLLYYVTSSLWQVIQQKLITNK 217 >gi|227529865|ref|ZP_03959914.1| stage III sporulation protein J precursor [Lactobacillus vaginalis ATCC 49540] gi|227350234|gb|EEJ40525.1| stage III sporulation protein J precursor [Lactobacillus vaginalis ATCC 49540] Length = 276 Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats. Identities = 53/234 (22%), Positives = 105/234 (44%), Gaps = 27/234 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W ++I + + N G +G+ I++ T+ +++L PL Q S + + PK+ Sbjct: 36 WDHYIVYNFSRFIIWLSNNCGGYGMGIIIFTIIIRVLLLPLMFYQTKSMLKTQELAPKLK 95 Query: 398 ELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++K+ + +Q+ +LYK +NP A P+++Q+P+ +A+Y+ I + E+R Sbjct: 96 AIQKKYSSRDRESMVKMQEETSKLYKEAGVNPWASMLPMIIQLPIMWALYQAIWRTPELR 155 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 H + W++ L DP I PI+ +L F+ +S + Sbjct: 156 H-GTFLWLQ-LGHTDPYY-------------------ILPILAALFTFLSSWLSMASMPE 194 Query: 515 GQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 AM + +MP++ F F + + +YW SN +VQ ++ Sbjct: 195 RNAMTSAMTWFMPIMVFFMALGFSSAITLYWVVSNAFQVVQTLLLQNPFKIRRE 248 >gi|29377772|ref|NP_816926.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Enterococcus faecalis V583] gi|227555681|ref|ZP_03985728.1| stage III sporulation protein J precursor [Enterococcus faecalis HH22] gi|255971546|ref|ZP_05422132.1| preprotein translocase subunit YidC [Enterococcus faecalis T1] gi|255974519|ref|ZP_05425105.1| preprotein translocase subunit YidC [Enterococcus faecalis T2] gi|256618530|ref|ZP_05475376.1| preprotein translocase subunit YidC [Enterococcus faecalis ATCC 4200] gi|256761851|ref|ZP_05502431.1| preprotein translocase subunit YidC [Enterococcus faecalis T3] gi|256854978|ref|ZP_05560339.1| pheromone cCF10 percursor/lipoprotein [Enterococcus faecalis T8] gi|256957018|ref|ZP_05561189.1| preprotein translocase subunit YidC [Enterococcus faecalis DS5] gi|256960828|ref|ZP_05564999.1| preprotein translocase subunit YidC [Enterococcus faecalis Merz96] gi|256963980|ref|ZP_05568151.1| preprotein translocase subunit YidC [Enterococcus faecalis HIP11704] gi|257078696|ref|ZP_05573057.1| preprotein translocase subunit YidC [Enterococcus faecalis JH1] gi|257081344|ref|ZP_05575705.1| preprotein translocase subunit YidC [Enterococcus faecalis E1Sol] gi|257084001|ref|ZP_05578362.1| preprotein translocase subunit YidC [Enterococcus faecalis Fly1] gi|257417422|ref|ZP_05594416.1| preprotein translocase subunit YidC [Enterococcus faecalis AR01/DG] gi|257418845|ref|ZP_05595839.1| preprotein translocase subunit yidC [Enterococcus faecalis T11] gi|257421340|ref|ZP_05598330.1| pheromone lipoprotein [Enterococcus faecalis X98] gi|294781245|ref|ZP_06746592.1| putative stage III sporulation protein J [Enterococcus faecalis PC1.1] gi|300861757|ref|ZP_07107837.1| putative stage III sporulation protein J [Enterococcus faecalis TUSoD Ef11] gi|38502948|sp|Q82YV1|OXAA_ENTFA RecName: Full=Membrane protein oxaA; Flags: Precursor gi|29345240|gb|AAO82996.1| pheromone cCF10 percursor/lipoprotein, 60 kDa [Enterococcus faecalis V583] gi|227175191|gb|EEI56163.1| stage III sporulation protein J precursor [Enterococcus faecalis HH22] gi|255962564|gb|EET95040.1| preprotein translocase subunit YidC [Enterococcus faecalis T1] gi|255967391|gb|EET98013.1| preprotein translocase subunit YidC [Enterococcus faecalis T2] gi|256598057|gb|EEU17233.1| preprotein translocase subunit YidC [Enterococcus faecalis ATCC 4200] gi|256683102|gb|EEU22797.1| preprotein translocase subunit YidC [Enterococcus faecalis T3] gi|256709491|gb|EEU24538.1| pheromone cCF10 percursor/lipoprotein [Enterococcus faecalis T8] gi|256947514|gb|EEU64146.1| preprotein translocase subunit YidC [Enterococcus faecalis DS5] gi|256951324|gb|EEU67956.1| preprotein translocase subunit YidC [Enterococcus faecalis Merz96] gi|256954476|gb|EEU71108.1| preprotein translocase subunit YidC [Enterococcus faecalis HIP11704] gi|256986726|gb|EEU74028.1| preprotein translocase subunit YidC [Enterococcus faecalis JH1] gi|256989374|gb|EEU76676.1| preprotein translocase subunit YidC [Enterococcus faecalis E1Sol] gi|256992031|gb|EEU79333.1| preprotein translocase subunit YidC [Enterococcus faecalis Fly1] gi|257159250|gb|EEU89210.1| preprotein translocase subunit YidC [Enterococcus faecalis ARO1/DG] gi|257160673|gb|EEU90633.1| preprotein translocase subunit yidC [Enterococcus faecalis T11] gi|257163164|gb|EEU93124.1| pheromone lipoprotein [Enterococcus faecalis X98] gi|294451708|gb|EFG20163.1| putative stage III sporulation protein J [Enterococcus faecalis PC1.1] gi|300848282|gb|EFK76039.1| putative stage III sporulation protein J [Enterococcus faecalis TUSoD Ef11] gi|323479237|gb|ADX78676.1| inner membrane protein [Enterococcus faecalis 62] gi|327536429|gb|AEA95263.1| stage III sporulation protein J [Enterococcus faecalis OG1RF] Length = 275 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 28/251 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + L G+ GI I+L T+ ++++ PL Q S + +QP++ Sbjct: 35 IWDRYIVYYFAQAIKFLS-LGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQL 93 Query: 397 DELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ P+ + + +LY +N+NP GC P+L+Q+P+ A+Y+ IS E+ Sbjct: 94 KALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPEL 153 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + + W+ L DP I PI+ ++ F +S Sbjct: 154 K-EGTFLWLS-LDKPDPY-------------------LILPILAAVFTFASTYLSSMSQL 192 Query: 514 KGQA--MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + A I+N+ MP + F S + L +YW SN Q ++ + Sbjct: 193 ETNASLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTGQTLLLNNPFKIRKEREEAA 252 Query: 571 RSTFSKNYNSQ 581 R ++ + Sbjct: 253 RQAKARERALE 263 >gi|299820845|ref|ZP_07052734.1| stage III sporulation protein J [Listeria grayi DSM 20601] gi|299817866|gb|EFI85101.1| stage III sporulation protein J [Listeria grayi DSM 20601] Length = 282 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 28/233 (12%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I P+ L+ +F NL G++ I I++ T+ ++L+ PL KQ S M IQPK+ Sbjct: 37 WSHYIVFPLSWLIRWFSDNLGGSYAIGIIVVTIIIRLIIMPLMIKQIKSQKEMTKIQPKM 96 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 EL++K+ Q LQ+ ++LY+ HN+NP+ GC P+L+Q+P+ Y+ IS + E+ Sbjct: 97 KELQQKYASKDNETKQKLQQETMRLYQEHNVNPMMGCLPLLIQMPILIGFYQAISRTAEI 156 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--- 510 + + + W+ L D I PI+ +++ F K+ Sbjct: 157 K-SDTFLWMT-LGHPDQFF-------------------ILPILAAITTFFSSKIGMMGQV 195 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +K AMI MPV+ + S P+ L +YW N+ + +Q +I + Sbjct: 196 QQNKSMAMITYIMPVMILVMGISLPSALALYWIIGNIFTFLQTLLINNPFKNK 248 >gi|154249719|ref|YP_001410544.1| 60 kDa inner membrane insertion protein [Fervidobacterium nodosum Rt17-B1] gi|154153655|gb|ABS60887.1| 60 kDa inner membrane insertion protein [Fervidobacterium nodosum Rt17-B1] Length = 448 Score = 121 bits (302), Expect = 4e-25, Method: Composition-based stats. Identities = 72/385 (18%), Positives = 147/385 (38%), Gaps = 46/385 (11%) Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSI 242 T+ + +I P T+ + I + + D K ++ Sbjct: 89 TYTINYGEKAEKDSYKSLQITFDYPNRLKKTYIFDDKLITYSYKV---KIESPDSVKIAL 145 Query: 243 SNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSI 302 +++ + + F P K+ + +F DG Sbjct: 146 PLIWSNDTVRSAMN--FFVSFRPDKDYASIVKFSGKLDGTKVV---------------GN 188 Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW----GWFYFIAKPMFMLMSYFYNLVG 358 + F++ G + + H + + E++ W+ FIA + ++ Sbjct: 189 SLEFFVYMGPYKKTVLKHVFGEDSGRLIELIKTIPGVGTWYSFIADGLTEFFNWINTFTR 248 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 NFG+ I++ T+ V+L+ +P Q M+ +QP ++ +++K+K Q Q+ +++L Sbjct: 249 NFGLTIIVFTIIVRLILYPFYHAQTKQMIQMRKLQPAVEAIKKKYKDP--QKQQEELMKL 306 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAAADPTNIFTLF 477 YK + INP +GC +L+Q+P+F +Y VI E+ + KDL+A Sbjct: 307 YKENKINPSSGCLMLLIQLPIFMLLYGVIQSYQELFSVSGGFLIWKDLSAG--GWGANWL 364 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 ++ L + I S Q +I+ +F F + P+G Sbjct: 365 FLIITILTSYYLALIT--------------SQDSRTAWQQIIMG---AIFPFFFINLPSG 407 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGA 562 + +YW+ +++I +V I K + Sbjct: 408 IFLYWTMNSIIQLVITFYIYKRYKI 432 >gi|89897803|ref|YP_521290.1| hypothetical protein DSY5057 [Desulfitobacterium hafniense Y51] gi|219670952|ref|YP_002461387.1| hypothetical protein Dhaf_4959 [Desulfitobacterium hafniense DCB-2] gi|89337251|dbj|BAE86846.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219541212|gb|ACL22951.1| 60 kDa inner membrane insertion protein [Desulfitobacterium hafniense DCB-2] Length = 231 Score = 121 bits (302), Expect = 4e-25, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 114/244 (46%), Gaps = 35/244 (14%) Query: 336 WGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 + ++ + + L + + ++G+AI+L T+ +K L +PL KQ S IQP Sbjct: 2 STFVVWMTELLKWLYNLTDLVGFASYGLAIILLTIIIKTLIYPLTWKQMKSMRKTMEIQP 61 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 K+ E+++K+K +P + L + ++LYK HN+NP GC P+L+Q+P+F+A+Y + Sbjct: 62 KLQEIQKKYKNNPEK-LNQETMELYKKHNLNPAGGCLPLLVQLPIFWALYNTLFH----- 115 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------ 508 D + ++ + I+ + F+Q K++ Sbjct: 116 -------------FDNYIADPSQAMFLWFSITENGNLVLAILAGATTFLQTKLTTASNPA 162 Query: 509 ---------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 P A Q M+L +MP+ + + P+GL +Y+ N++S++QQ I + Sbjct: 163 MKAQNNTGKPDAAQSTQKMMLYFMPLFMAYITWTVPSGLGLYFFTMNIVSVLQQLYINRK 222 Query: 560 HGAE 563 E Sbjct: 223 LNKE 226 >gi|227543716|ref|ZP_03973765.1| stage III sporulation protein J precursor [Lactobacillus reuteri CF48-3A] gi|300908781|ref|ZP_07126244.1| stage III sporulation protein J [Lactobacillus reuteri SD2112] gi|227186284|gb|EEI66355.1| stage III sporulation protein J precursor [Lactobacillus reuteri CF48-3A] gi|300894188|gb|EFK87546.1| stage III sporulation protein J [Lactobacillus reuteri SD2112] Length = 277 Score = 121 bits (302), Expect = 4e-25, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 107/251 (42%), Gaps = 27/251 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + + G +G+ I++ T+ ++++ PL Q + + + P++ Sbjct: 36 IWDHYIIYNCSQFIIWLSKHFGGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQL 95 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +++K+ Q +Q +LYK +NP A P+L+Q+PV +A+Y+ I + + Sbjct: 96 KAIQKKYSSRDRESMQKMQMETQKLYKEAGVNPWASMLPLLVQLPVMWALYQAIWRTSAL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512 R+ + W++ L DP I PI+ +L FI +S Sbjct: 156 RN-GTFLWLQ-LGHPDPYY-------------------IMPILAALFTFISSWLSMASMP 194 Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + + +MP++ F F + + +YW +N +VQ +I ++ Sbjct: 195 EKNSMTTTMTWFMPIMVFFMALGFSSAITLYWVVTNAFQVVQTLIIQNPFKIRREREEKQ 254 Query: 571 RSTFSKNYNSQ 581 R+ +K + Sbjct: 255 RAEKAKRRKIE 265 >gi|225016764|ref|ZP_03705956.1| hypothetical protein CLOSTMETH_00676 [Clostridium methylpentosum DSM 5476] gi|224950432|gb|EEG31641.1| hypothetical protein CLOSTMETH_00676 [Clostridium methylpentosum DSM 5476] Length = 348 Score = 121 bits (302), Expect = 4e-25, Method: Composition-based stats. Identities = 66/289 (22%), Positives = 124/289 (42%), Gaps = 51/289 (17%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + P+ ++ Y +V N+G+AI++ T+ +K+ P+A KQ S+A M QP+I E Sbjct: 7 YELFGTPLGYVIWAIYQVVKNYGVAIIIFTIILKVAMLPIAIKQQKSSAKMGAFQPRIAE 66 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---------- 448 + +K+ ++P Q Q+ + +LY+ +P+ GC P+L+Q + F I V+ Sbjct: 67 INKKYAKNP-QKKQEELTKLYEEEGYSPMKGCLPMLIQFVILFGIIDVVYKPLTHILHLS 125 Query: 449 -------------ISLEMRHAPFWGWIKDLAAADPTNI---------------FTLFGIL 480 + M I D DP+ G+ Sbjct: 126 KDVIAKAAEIIGGNAGAMNQQ---LKIVDAIQQDPSKFSELGQNVIDKVNSLDLNFLGLN 182 Query: 481 PFYLPGFMHVGIW-PIIMSLS----MFIQMKMSPPPADK---GQAMILNWMPVVFVFALS 532 +P + + I PI+ + MF+ MKM+P M++ MP+ V+ Sbjct: 183 LGSVPNWTSILIIIPILAGIFSFLQMFVSMKMNPMGETPGAGSMKMMMFVMPIFSVWITF 242 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 S P G+ IYW + V+ I Q ++ K++ + L ++ + + ++ Sbjct: 243 SVPVGVGIYWILTYVVGIGQVLLLNKLYNPK-ELREQAIAEMEERQKAR 290 >gi|269217839|ref|ZP_06161693.1| preprotein translocase, YidC subunit [Actinomyces sp. oral taxon 848 str. F0332] gi|269212774|gb|EEZ79114.1| preprotein translocase, YidC subunit [Actinomyces sp. oral taxon 848 str. F0332] Length = 382 Score = 121 bits (302), Expect = 4e-25, Method: Composition-based stats. Identities = 60/274 (21%), Positives = 121/274 (44%), Gaps = 36/274 (13%) Query: 340 YFIAKPMFMLMSYFYNLV-------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 ++ + ++ + + ++I+ TV V+LL PL KQ S+ + I Sbjct: 1 MWVIAWIMEILRRVFVAFGLPDGAGAAWVLSIIGLTVVVRLLVLPLYNKQIRSSRQAQVI 60 Query: 393 QPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 QP++ ++++K+K +Q+ M +Y+ H +P A C P+L+Q+P+ FA+Y+VIS Sbjct: 61 QPEVQKIQKKYKGKKDMVSRRRMQEEMQAVYRKHGTSPFATCLPMLVQMPILFALYRVIS 120 Query: 449 ISLEM---RHAPFWGWIKDLAA-ADPTNIFTLFGILPF----YLPGFMHVGIWPIIMSLS 500 + R K+LA + + +F F + +G+ +IMS + Sbjct: 121 AFPGISSGRREALGPITKELATDFEKSTVFGAPLATNFRTAASTNSQIVIGVLVLIMSAT 180 Query: 501 MFIQM----KMSPP--------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 MF + + P P + Q +++ MP++++F +++YW N+ Sbjct: 181 MFYTQHQLMRKNMPESALDKSNPMYRTQQIMMYGMPIMYIFMGGVLQVAVLVYWVAGNIW 240 Query: 549 SIVQQAVIMKMHGAE-----IGLIDRLRSTFSKN 577 ++ QQA ++ + RLR + Sbjct: 241 NLCQQAWFIRNNPTPGSQAYKERQKRLREKRERK 274 >gi|15613732|ref|NP_242035.1| stage III sporulation protein J [Bacillus halodurans C-125] gi|38503193|sp|Q9KDP2|OXAA2_BACHD RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|10173785|dbj|BAB04888.1| stage III sporulation protein J [Bacillus halodurans C-125] Length = 280 Score = 121 bits (302), Expect = 4e-25, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 124/270 (45%), Gaps = 51/270 (18%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W +F PM L++ NL+ ++G++I++ T+ ++L PL KQ S M+ I+P+ Sbjct: 36 IWNHFFVYPMSWLITTVANLLNGSYGLSIIIVTILIRLALLPLTLKQQKSMRAMQVIRPE 95 Query: 396 IDELREKFKQSP------PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +++K+K+ Q +QK ++ LY+ H +NP+AGC P+ +Q+P+ A Y I Sbjct: 96 MEAIQKKYKEKGSKDPKVQQEMQKELLGLYQKHGVNPMAGCLPLFIQLPILMAFYFAIMR 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + E+R+ + W DL D I P + ++ + Q KM+ Sbjct: 156 TEEIRY-HTFLWF-DLGQPD---------------------YILPFVAGITTYFQFKMTM 192 Query: 510 ------------------PPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISI 550 + Q ++ + MPV+ + A S P+ L +YW N+ I Sbjct: 193 SHQQQMQKTNPSDSDNPMANMMQMQMKVMLYVMPVMIIIAGLSLPSALSLYWVIGNIFMI 252 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 +Q I+ A +++ + SK + Sbjct: 253 IQTYFIV--VKAPPLEVEQTKQKSSKPNKA 280 >gi|184154473|ref|YP_001842814.1| cell division protein [Lactobacillus reuteri JCM 1112] gi|183225817|dbj|BAG26334.1| cell division protein [Lactobacillus reuteri JCM 1112] Length = 277 Score = 121 bits (302), Expect = 4e-25, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 107/251 (42%), Gaps = 27/251 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + + G +G+ I++ T+ ++++ PL Q + + + P++ Sbjct: 36 IWDHYIIYNCSQFIIWLSKHFGGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQL 95 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +++K+ Q +Q +LYK +NP A P+L+Q+PV +A+Y+ I + + Sbjct: 96 KAIQKKYSSRDRESMQKMQMETQKLYKEAGVNPWASMLPLLVQLPVMWALYQAIWRTSAL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512 R+ + W++ L DP I PI+ +L FI +S Sbjct: 156 RN-GTFLWLQ-LGHPDPYY-------------------IMPILAALFTFISSWLSMASMP 194 Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + + +MP++ F F + + +YW +N +VQ +I ++ Sbjct: 195 EKNSMTTTMTWFMPIMVFFMALGFSSAITLYWVVTNAFQVVQTLIIQNPFKIRREREEKQ 254 Query: 571 RSTFSKNYNSQ 581 R+ +K + Sbjct: 255 RAEKAKRRKIE 265 >gi|148545141|ref|YP_001272511.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM 20016] gi|194467400|ref|ZP_03073387.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri 100-23] gi|227364304|ref|ZP_03848397.1| stage III sporulation protein J precursor [Lactobacillus reuteri MM2-3] gi|325683503|ref|ZP_08163019.1| stage III sporulation protein J [Lactobacillus reuteri MM4-1A] gi|148532175|gb|ABQ84174.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM 20016] gi|194454436|gb|EDX43333.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri 100-23] gi|227070617|gb|EEI08947.1| stage III sporulation protein J precursor [Lactobacillus reuteri MM2-3] gi|324977853|gb|EGC14804.1| stage III sporulation protein J [Lactobacillus reuteri MM4-1A] Length = 263 Score = 121 bits (302), Expect = 4e-25, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 107/251 (42%), Gaps = 27/251 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + + G +G+ I++ T+ ++++ PL Q + + + P++ Sbjct: 22 IWDHYIIYNCSQFIIWLSKHFGGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQL 81 Query: 397 DELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +++K+ Q +Q +LYK +NP A P+L+Q+PV +A+Y+ I + + Sbjct: 82 KAIQKKYSSRDRESMQKMQMETQKLYKEAGVNPWASMLPLLVQLPVMWALYQAIWRTSAL 141 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512 R+ + W++ L DP I PI+ +L FI +S Sbjct: 142 RN-GTFLWLQ-LGHPDPYY-------------------IMPILAALFTFISSWLSMASMP 180 Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + + +MP++ F F + + +YW +N +VQ +I ++ Sbjct: 181 EKNSMTTTMTWFMPIMVFFMALGFSSAITLYWVVTNAFQVVQTLIIQNPFKIRREREEKQ 240 Query: 571 RSTFSKNYNSQ 581 R+ +K + Sbjct: 241 RAEKAKRRKIE 251 >gi|68160684|gb|AAY86788.1| lr0252 [Lactobacillus reuteri] Length = 277 Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 108/251 (43%), Gaps = 27/251 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + + G +G+ I++ T+ ++++ PL Q + + + P++ Sbjct: 36 IWDHYIIYNCSQFIIWLSKHFGGYGMGIIIFTIIIRIILLPLMFYQTKTMMKTQELAPQL 95 Query: 397 DELREKFKQSPPQVLQKAMI---QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +++K+ + +QK + +LYK +NP A P+L+Q+PV + +Y+ I + + Sbjct: 96 KAIQKKYSSRDRESMQKMQMETHKLYKEAGVNPWASMLPLLVQLPVMWGLYQAIWRTSAL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512 R+ + W++ L DP I PI+ +L FI +S Sbjct: 156 RN-GTFLWLQ-LGHPDPYY-------------------IMPILAALFTFISSWLSMASMP 194 Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + + +MP++ F F + + +YW +N +VQ +I ++ Sbjct: 195 EKNSMTTTMTWFMPIMVFFMALGFSSAITLYWVVTNAFQVVQTLIIQNPFKIRREREEKQ 254 Query: 571 RSTFSKNYNSQ 581 R+ +K + Sbjct: 255 RAEKAKRRKIE 265 >gi|65317011|ref|ZP_00389970.1| COG0706: Preprotein translocase subunit YidC [Bacillus anthracis str. A2012] Length = 262 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 126/240 (52%), Gaps = 33/240 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 W ++ P+ ++ + + + + GIAI++ T+ ++ PLA QY S A MK +QP Sbjct: 38 IWDHYFVYPISFMIQFVAHHIPGASXGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQP 97 Query: 395 KIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++ +L++ + + QK M +L K+ NPLAGCWP+L+Q+P+F A+Y IS Sbjct: 98 ELQKLKQXYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISR 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 + E+R + W+ +L ADP + I PII +L+ FIQMK+ Sbjct: 158 TEEIR-TSTFLWV-NLGHADPYH-------------------ILPIIAALTTFIQMKVFQ 196 Query: 508 -SPPPADKGQAMILN--WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + ++ Q + + MP + +F + P+GL++YW N+ +++Q V+ K+ E Sbjct: 197 SNSTSGEQVQMLKMQQIMMPAMILFMGFAAPSGLVLYWITGNLFTMMQTIVLRKIMEREE 256 >gi|312903103|ref|ZP_07762284.1| putative stage III sporulation protein J [Enterococcus faecalis TX0635] gi|310633494|gb|EFQ16777.1| putative stage III sporulation protein J [Enterococcus faecalis TX0635] gi|315163327|gb|EFU07344.1| putative stage III sporulation protein J [Enterococcus faecalis TX0645] gi|315578835|gb|EFU91026.1| putative stage III sporulation protein J [Enterococcus faecalis TX0630] Length = 266 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 28/251 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + L G+ GI I+L T+ ++++ PL Q S + +QP++ Sbjct: 26 IWDRYIVYYFAQAIKFLS-LGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQL 84 Query: 397 DELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ P+ + + +LY +N+NP GC P+L+Q+P+ A+Y+ IS E+ Sbjct: 85 KALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPEL 144 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + + W+ L DP I PI+ ++ F +S Sbjct: 145 K-EGTFLWLS-LDKPDPY-------------------LILPILAAVFTFASTYLSSMSQL 183 Query: 514 KGQA--MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + A I+N+ MP + F S + L +YW SN VQ ++ + Sbjct: 184 ETNASLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTVQTLLLNNPFKIRKEREEAA 243 Query: 571 RSTFSKNYNSQ 581 R ++ + Sbjct: 244 RQAKARERALE 254 >gi|163791581|ref|ZP_02185983.1| Membrane protein chaperone oxaA [Carnobacterium sp. AT7] gi|159873159|gb|EDP67261.1| Membrane protein chaperone oxaA [Carnobacterium sp. AT7] Length = 275 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 27/260 (10%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P + Y I +++ G++G+ I++ T+ ++L+ P+ Q ST Sbjct: 27 PITDQSTGIWDKYIIFNFSRIIVWLSNLFGGSYGVGIIIFTLIIRLILLPVMHGQTKSTR 86 Query: 388 NMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 M +QP++ EL+ K+ L++ +LY +NP+AGC P+L+Q+PV A+Y Sbjct: 87 KMAELQPQLKELQTKYASKDTDTQNKLKEETSKLYSEAGVNPVAGCLPLLIQMPVLIAMY 146 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + IS + E+ + W+ +L A DP I P+I ++ + Sbjct: 147 QAISRT-EVLKTGNFLWM-NLGAPDPLF-------------------ILPVIAAILTYAT 185 Query: 505 MK---MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 K MS ++ ++ MP + +F + P+ L +YW N S+ Q ++ Sbjct: 186 TKLSTMSQAESNPTTTTMMYMMPALILFMGITLPSALSLYWVVGNAFSVGQTMLLNNPFK 245 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 +++++ + + Sbjct: 246 IIKEREEKIQAERDRKRALE 265 >gi|224001688|ref|XP_002290516.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973938|gb|EED92268.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 446 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 17/266 (6%) Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 + D + K + + +GI+I+ TV +K L Sbjct: 96 EAVTASSADPNAQNGWFGFLTLPIEGLLKLIHGGLDSMGMSSNAWGISIIAMTVVIKALT 155 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 FPL K Q ST M+ +QP I L+ K++ +P + + + ++Y+T+ +NPLAGC P L+ Sbjct: 156 FPLTKSQLESTNKMQALQPTIKSLQAKYQSNPEVM-NQKIAEVYQTNEVNPLAGCIPSLV 214 Query: 436 QIPVFFAIYK-VISISLEMRHAPFWGWIKDLAAA----------DPTNIFTLFGILPFYL 484 QIPVF +Y+ V++++ E + ++ +L D + G+ Sbjct: 215 QIPVFIGLYRAVLNLAKENALDEPFLFLPNLEGPTYGADPAHGSDWLFKNWVDGVPGLGW 274 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAM---ILNWMPVVFVFALSSFPAGLII 540 + P+ +++S I M M P D Q IL +P + + + PA L + Sbjct: 275 EDTIAFLSIPVFLTISQVISMNMMQPKTDDPQQQQANVILKVLPFMIGWFALNVPAALGV 334 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGL 566 YW +N+++ + + + Sbjct: 335 YWVVNNIVTTATTLYVRNSMP-KPDV 359 >gi|81429494|ref|YP_396495.1| membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei 23K] gi|78611137|emb|CAI56190.1| Membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei 23K] Length = 277 Score = 120 bits (300), Expect = 6e-25, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 29/243 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y I L+ G++G AI+ T+ ++L+ PL Q + + + P+I L Sbjct: 41 YIIYNFSRFLLWLADIFGGSYGWAIVAFTIIIRLIILPLTWWQSKTMMKQQEVAPEIQAL 100 Query: 400 REKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++K+ Q L++ +LY +NP+ GC P+L+Q+PV A+Y+ I + ++ Sbjct: 101 QKKYASKDVETQQKLREETQKLYAEAGVNPVIGCLPLLVQMPVLIALYQAIYRTSALKSG 160 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ---MKMSPPPAD 513 + W++ L ADP I I+ ++ F MS P + Sbjct: 161 S-FLWMQ-LGKADPYF-------------------IMAILAAVFTFATSYLTMMSQPTKN 199 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +L MP++ + + + IYW +N S+ Q VI + +I + Sbjct: 200 ATTTAMLWVMPIMIFVMAMNIASAVSIYWVVTNAFSVGQTMVIQ--NPFKIRREREAKEQ 257 Query: 574 FSK 576 + Sbjct: 258 VKR 260 >gi|295398138|ref|ZP_06808187.1| stage III sporulation protein J [Aerococcus viridans ATCC 11563] gi|294973657|gb|EFG49435.1| stage III sporulation protein J [Aerococcus viridans ATCC 11563] Length = 277 Score = 120 bits (300), Expect = 6e-25, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 116/244 (47%), Gaps = 27/244 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +I ++ + ++ GN+G+ I+ T+ ++++ PL K Q ST M+ +QP++ Sbjct: 38 WDRYIVYNFSRIIVWLSDIFGNYGVGIIAFTLIIRIILIPLTKYQTQSTEKMQMMQPELK 97 Query: 398 ELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L+EK+ P Q LQ+ +L + ++ + +GC P+L+Q+P+ A+Y+ IS + E+ Sbjct: 98 ALQEKYASKDPETQQKLQEETAKLNEKYDYSMWSGCLPMLIQLPILMALYQSISRT-EIL 156 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPP 511 + W++ L D + PII ++ + +++ P Sbjct: 157 SQGHFLWLE-LGVPDQLF-------------------VIPIIAAILTWYNTRLTTIGTPN 196 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 ++ AM+ MPV+ +F + P+ + +YW S +I+Q V+ D++R Sbjct: 197 SNPSMAMMQWTMPVMILFMGVTLPSAISLYWVASTGFTILQTLVMNNPFKKRDAREDQIR 256 Query: 572 STFS 575 Sbjct: 257 KEKE 260 >gi|225181149|ref|ZP_03734595.1| 60 kDa inner membrane insertion protein [Dethiobacter alkaliphilus AHT 1] gi|225168118|gb|EEG76923.1| 60 kDa inner membrane insertion protein [Dethiobacter alkaliphilus AHT 1] Length = 220 Score = 120 bits (300), Expect = 6e-25, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 123/221 (55%), Gaps = 9/221 (4%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I + ++ +F N+ GN+GIAI+L T+ ++L+ +PL KQ S M+ +QP++ +L+E Sbjct: 4 IVDFLNEILMFFNNVTGNYGIAIILLTLLIRLVTWPLQNKQLTSAKAMQELQPELKKLQE 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K + L +A ++L+K H +NP A C P+L+Q+PV +A+++V+ + + F G Sbjct: 64 KYKNDKEK-LNQATMELWKEHKVNPAASCLPLLIQMPVLWAMFQVLRDQVTIADTMFLGM 122 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 ++ D + LF + + II ++ F+Q KM DK Q ++ Sbjct: 123 DMTVSVMDLRELGLLFAATS------IGYYLLVIISGVTTFLQQKMMMS--DKSQQAMMI 174 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 MP++ +F FPAGL++YW +N +SI Q +I K Sbjct: 175 MMPLMLLFFSLQFPAGLVLYWVVNNSLSIGQHFLINKNVKK 215 >gi|257088483|ref|ZP_05582844.1| preprotein translocase yidC [Enterococcus faecalis CH188] gi|256997295|gb|EEU83815.1| preprotein translocase yidC [Enterococcus faecalis CH188] Length = 275 Score = 120 bits (300), Expect = 6e-25, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 28/251 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + L G+ GI I+L T+ ++++ PL Q S + +QP++ Sbjct: 35 IWDRYIVYYFAQAIKFLS-LGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQL 93 Query: 397 DELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ P+ + + +LY +N+NP GC P+L+Q+P+ A+Y+ IS E+ Sbjct: 94 KALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPEL 153 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + + W+ L DP I PI+ ++ F +S Sbjct: 154 K-EGTFLWLS-LDKPDPY-------------------LILPILAAVFTFASTYLSSMSQL 192 Query: 514 KGQA--MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + A I+N+ MP + F S + L +YW SN VQ ++ + Sbjct: 193 ETNASLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTVQTLLLNNPFKIRKEREEAA 252 Query: 571 RSTFSKNYNSQ 581 R ++ + Sbjct: 253 RQAKARERALE 263 >gi|191639866|ref|YP_001989032.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23] gi|239630800|ref|ZP_04673831.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067927|ref|YP_003789950.1| preprotein translocase subunit YidC [Lactobacillus casei str. Zhang] gi|190714168|emb|CAQ68174.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23] gi|239527083|gb|EEQ66084.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300440334|gb|ADK20100.1| Preprotein translocase subunit YidC [Lactobacillus casei str. Zhang] gi|327383980|gb|AEA55456.1| Membrane protein oxaA 1 [Lactobacillus casei LC2W] gi|327387164|gb|AEA58638.1| Membrane protein oxaA 1 [Lactobacillus casei BD-II] Length = 278 Score = 120 bits (300), Expect = 7e-25, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 102/240 (42%), Gaps = 21/240 (8%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + ++ GN G+ I+ T+ +++L FPL+ S + + I P++ EL Sbjct: 41 YVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYMSIKSMSKQQEIAPQLKEL 100 Query: 400 REKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++K+ + + +LY + +NP+ GC PI++Q+P A+Y+ I + + Sbjct: 101 QKKYSSKDTETQTRLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSL-QT 159 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + W+ +L+ DP I + L + SM Q P + Sbjct: 160 GTFLWM-NLSQPDPLWIMQILATLFTLGTSVL-----------SMMAQ-----PTRNSSS 202 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +++ PV+ + P+ L IYW +N S++QQ +I + ++ K Sbjct: 203 WLMMIVSPVMIFVFSITLPSALAIYWVVTNAFSMIQQLLIQNPFKIRREREAKAQAEKEK 262 >gi|222100006|ref|YP_002534574.1| Inner membrane protein oxaA [Thermotoga neapolitana DSM 4359] gi|221572396|gb|ACM23208.1| Inner membrane protein oxaA [Thermotoga neapolitana DSM 4359] Length = 445 Score = 120 bits (299), Expect = 8e-25, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 136/311 (43%), Gaps = 32/311 (10%) Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 + Y+AS + ++ K+ + + + + T A + Sbjct: 152 YMENYFASF---NSKSRTLVLVKHDEGLRFEGTLEVNGQKRLTVFMGPNKRTLIKKAFPE 208 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 ++ ++ IP F W+ + + + +L +FG AI+L T+ V+L Sbjct: 209 DYESLMKAL--GNIPGFNR-----WYDTVFYGLVWFFWWLKDLTKSFGWAIVLFTLIVRL 261 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 + +PL Q S NM+ +QP+I+ +++K+K Q Q+A+++LYK +NP +GC + Sbjct: 262 ILYPLYHAQTKSLINMRKLQPQIEAIKKKYKDPAKQ--QEALLKLYKEAGVNPASGCLML 319 Query: 434 LLQIPVFFAIYKVISISLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 L+Q+P+F ++ VI +E ++ + KDL+A GF + I Sbjct: 320 LIQLPIFILLWSVIRYYVEEFAYSGGFLIWKDLSA-----------------GGFANNWI 362 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + +I +S + ++ D A M ++F F P+GL +Y++ + +I + Sbjct: 363 FLVITIVSSYYTTLLT--SQDVRTAWQGLIMSIIFPFLFVGLPSGLFLYYTTNTLIQLAV 420 Query: 553 QAVIMKMHGAE 563 + + + Sbjct: 421 TYYTYRRYKIK 431 >gi|257875890|ref|ZP_05655543.1| inner membrane protein [Enterococcus casseliflavus EC20] gi|257810056|gb|EEV38876.1| inner membrane protein [Enterococcus casseliflavus EC20] Length = 274 Score = 120 bits (299), Expect = 8e-25, Method: Composition-based stats. Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 27/226 (11%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQK 413 GN GI I+L T+ ++++ PL Q S + +QPK+ L++++ + L++ Sbjct: 54 FGNAGIGIILFTLIIRVILMPLMHFQTKSMRKTQELQPKLKALQQQYASKDTETQSKLKE 113 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 +LY +N+NP AGC P+L+Q+P+ A+++ IS + + W++ L DP Sbjct: 114 ETQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPAL-QEGKFLWLQ-LGDRDPYF- 170 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--MILNW-MPVVFVFA 530 I PI+ +L F +S + A I+N+ MP++ + Sbjct: 171 ------------------ILPILAALFTFASTYLSSMSQVESNASLKIMNFAMPMMILLM 212 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + +GL +YW SN +VQ ++ + R + Sbjct: 213 GINIASGLSLYWVVSNAFQVVQTMILNNPFKIRQEREEAARKERER 258 >gi|257866272|ref|ZP_05645925.1| inner membrane protein [Enterococcus casseliflavus EC30] gi|257873212|ref|ZP_05652865.1| inner membrane protein [Enterococcus casseliflavus EC10] gi|257800230|gb|EEV29258.1| inner membrane protein [Enterococcus casseliflavus EC30] gi|257807376|gb|EEV36198.1| inner membrane protein [Enterococcus casseliflavus EC10] Length = 274 Score = 120 bits (299), Expect = 8e-25, Method: Composition-based stats. Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 27/226 (11%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQK 413 GN GI I+L T+ ++++ PL Q S + +QPK+ L++++ + L++ Sbjct: 54 FGNAGIGIILFTLIIRVILMPLMHFQTKSMRKTQELQPKLKALQQQYASKDTETQSKLKE 113 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 +LY +N+NP AGC P+L+Q+P+ A+++ IS + + W++ L DP Sbjct: 114 ETQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPAL-QEGKFLWLQ-LGDRDPYF- 170 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--MILNW-MPVVFVFA 530 I PI+ +L F +S + A I+N+ MP++ + Sbjct: 171 ------------------ILPILAALFTFASTYLSSMSQVESNASLKIMNFAMPMMILLM 212 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + +GL +YW SN +VQ ++ + R + Sbjct: 213 GINIASGLSLYWVVSNAFQVVQTMILNNPFKIRQEREEAARKERER 258 >gi|227533510|ref|ZP_03963559.1| stage III sporulation protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188839|gb|EEI68906.1| stage III sporulation protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 264 Score = 120 bits (299), Expect = 8e-25, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 21/240 (8%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + ++ GN G+ I+ T+ +++L FPL+ S + + I P++ EL Sbjct: 27 YVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYMSIKSMSKQQEIAPQLKEL 86 Query: 400 REKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++K+ L+ +LY + +NP+ GC PI++Q+P A+Y+ I + + Sbjct: 87 QKKYSSKDTESQTRLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSL-QT 145 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + W+ +L+ DP I + L + SM Q P + Sbjct: 146 GTFLWM-NLSQPDPLWIMQILATLFTLGTSVL-----------SMMAQ-----PTRNSSS 188 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +++ PV+ + P+ L IYW +N S++QQ +I + ++ K Sbjct: 189 WLMMIVSPVMIFVFSITLPSALAIYWVVTNAFSMIQQLLIQNPFKIRREREAKAQAEKEK 248 >gi|116496323|ref|YP_808057.1| preprotein translocase subunit YidC [Lactobacillus casei ATCC 334] gi|116106473|gb|ABJ71615.1| Preprotein translocase subunit YidC [Lactobacillus casei ATCC 334] Length = 278 Score = 120 bits (299), Expect = 8e-25, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 21/240 (8%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + ++ GN G+ I+ T+ +++L FPL+ S + + I P++ EL Sbjct: 41 YVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYMSIKSMSKQQEIAPQLKEL 100 Query: 400 REKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 + K+ + + +LY + +NP+ GC PI++Q+P A+Y+ I + + Sbjct: 101 QRKYSSKDTETQTRLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALYQAILRTSSL-QT 159 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + W+ +L+ DP I + L + SM Q P + Sbjct: 160 GTFLWM-NLSQPDPLWIMQILATLFTLGTSVL-----------SMMAQ-----PTRNSSS 202 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +++ PV+ + P+ L IYW +N S++QQ +I + ++ K Sbjct: 203 WLMMIVSPVMIFVFSITLPSALAIYWVVTNAFSMIQQLLIQNPFKIRREREAKAQAEKEK 262 >gi|299541768|ref|ZP_07052091.1| membrane protein oxaA 1 precursor [Lysinibacillus fusiformis ZC1] gi|298725506|gb|EFI66147.1| membrane protein oxaA 1 precursor [Lysinibacillus fusiformis ZC1] Length = 256 Score = 120 bits (299), Expect = 8e-25, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 23/224 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W FI P+ + YF +L+G + I+ T+ ++L PL KQ S+ M+ IQPK+ Sbjct: 36 WNEFIVWPLVSAIKYFADLLGTYAWGIIAVTIIIRLAILPLMIKQTKSSKKMQEIQPKLK 95 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 EL++K+ Q Q+ M++L +NPLAGC P+++Q+P+ Y IS Sbjct: 96 ELQKKYASKDAQTQQQYQQEMMKLMSESGVNPLAGCLPVIIQMPILIGFYHAISR----- 150 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + + D N F P I L FI ++ P + Sbjct: 151 -------MNATSTFDLGNFFIFPLADP--------APALAITAGLMQFIVLRTGPAMDNP 195 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +++ MP + + + PA L +YW N+ISI Q I K Sbjct: 196 QMKIMMYIMPFMIIGFGMALPAALSLYWVIGNIISIFQNLYIYK 239 >gi|325567645|ref|ZP_08144312.1| stage III sporulation protein J [Enterococcus casseliflavus ATCC 12755] gi|325159078|gb|EGC71224.1| stage III sporulation protein J [Enterococcus casseliflavus ATCC 12755] Length = 274 Score = 120 bits (299), Expect = 8e-25, Method: Composition-based stats. Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 27/226 (11%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQK 413 GN GI I+L T+ ++++ PL Q S + +QPK+ L++++ + L++ Sbjct: 54 FGNAGIGIILFTLIIRVILMPLMHFQTKSMRKTQELQPKLKALQQQYASKDTETQSKLKE 113 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 +LY +N+NP AGC P+L+Q+P+ A+++ IS + + W++ L DP Sbjct: 114 ETQRLYAENNVNPYAGCLPLLVQMPILMALWQSISRVPAL-QEGKFLWLQ-LGDRDPYF- 170 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--MILNW-MPVVFVFA 530 I PI+ +L F +S + A I+N+ MP++ + Sbjct: 171 ------------------ILPILAALFTFASTYLSSMSQVESNASLKIMNFAMPMMILLM 212 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + +GL +YW SN ++Q ++ + R + Sbjct: 213 GINIASGLSLYWVVSNAFQVLQTMILNNPFKIRQEREEAARKERER 258 >gi|220933190|ref|YP_002510098.1| 60 kDa inner membrane insertion protein [Halothermothrix orenii H 168] gi|219994500|gb|ACL71103.1| 60 kDa inner membrane insertion protein [Halothermothrix orenii H 168] Length = 217 Score = 120 bits (299), Expect = 9e-25, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 117/221 (52%), Gaps = 17/221 (7%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 ++ + M + N V N+G+AI++ T+F+KLL +PL KQ S M+++QP++ + Sbjct: 1 MGWLTEIMTDTLILLNNWVHNYGLAIIILTIFIKLLLYPLTAKQTKSMKAMQDLQPEMKK 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++EK+K + + Q+ M++LY+ HN+NP AGC+P++LQ+ + + +++ IS Sbjct: 61 IQEKYKDNKEK-QQEEMMKLYQEHNVNPAAGCFPMILQLFIIWPLFRAISG--------- 110 Query: 459 WGWIKDLAAADPTNIFTLFGIL--PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 +KD+ A + + + P + I I M ++ K + + Sbjct: 111 ---LKDIMAPEEATFLWIGNLTEGSLATPDITLIIINVIAMIGQTYLTQKWT--GNNSQN 165 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 I+ MP + ++ PAG+++YW V++++QQ +I Sbjct: 166 NAIMWVMPFIILWFGFKLPAGVLLYWLTQTVLTVIQQYIIY 206 >gi|315026681|gb|EFT38613.1| putative stage III sporulation protein J [Enterococcus faecalis TX2137] Length = 266 Score = 120 bits (299), Expect = 9e-25, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 28/251 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + L G+ GI I+L T+ ++++ PL Q S + +QP++ Sbjct: 26 IWDRYIVYYFAQAIKFLS-LGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQL 84 Query: 397 DELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ P+ + + +LY +N+NP GC P+L+Q+P+ A+Y+ IS E+ Sbjct: 85 KALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPEL 144 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + + W+ L DP I PI+ ++ F +S Sbjct: 145 K-EGTFMWLS-LDKPDPY-------------------LILPILAAVFTFASTYLSSMSQL 183 Query: 514 KGQA--MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + A I+N+ MP + F S + L +YW SN Q ++ + Sbjct: 184 ETNASLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTGQTLLLNNPFKIRKEREEAA 243 Query: 571 RSTFSKNYNSQ 581 R ++ + Sbjct: 244 RQAKARERALE 254 >gi|116334864|ref|YP_796391.1| preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367] gi|116100211|gb|ABJ65360.1| Preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367] Length = 277 Score = 120 bits (299), Expect = 9e-25, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 107/256 (41%), Gaps = 29/256 (11%) Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 P + ++ + G++G+ I+ T+ ++++ PL Q S Sbjct: 25 NKPITNQSTGIWDGLIVLNFSRAIIWLAHLFGGSYGVGIIAFTIIIRVILMPLMIFQTRS 84 Query: 386 TANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 + +QP++ L++K+ Q LQ +LY INP+ GC P L+Q+P+ +A Sbjct: 85 MRKTQEVQPQLKALQKKYSSKDRETMQKLQAEQQKLYSEAGINPMMGCLPALVQLPIIWA 144 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y+ I + +R + + W++ L DP I PI+ +L+ F Sbjct: 145 LYQAIWRTAVLR-SGTFLWLQ-LGHKDPYF-------------------ILPILAALATF 183 Query: 503 IQMKMSP---PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + ++ P + M++ MPVV F + + L +YW+ S V + Q +I Sbjct: 184 LSSWLTTKSAPETNSMNTMMIVGMPVVVFFTAMNVASSLSLYWTVSYVFQVGQTLLIQ-- 241 Query: 560 HGAEIGLIDRLRSTFS 575 + +I + Sbjct: 242 NPWKIQAERDAKEKEK 257 >gi|169830199|ref|YP_001700357.1| membrane protein oxaA 1 [Lysinibacillus sphaericus C3-41] gi|168994687|gb|ACA42227.1| Membrane protein oxaA 1 precursor [Lysinibacillus sphaericus C3-41] Length = 256 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 23/224 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W FI P+ + YF +L+G + I+ T+ ++L PL KQ S+ M+ IQPK+ Sbjct: 36 WNEFIVWPLVSAIKYFADLLGTYAWGIIAVTIIIRLAILPLMIKQTKSSKKMQEIQPKLK 95 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 EL++K+ Q Q+ M++L +NPLAGC P+++Q+P+ Y IS Sbjct: 96 ELQKKYASKDAQTQQQYQQEMMKLMSESGVNPLAGCLPVIIQMPILIGFYHAISR----- 150 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + + D N F P I L FI ++ P + Sbjct: 151 -------MNATSTFDLGNFFIFPLADP--------APALAITAGLMQFIVLRTGPAMDNP 195 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +++ MP + + + PA L +YW N+ISI Q I K Sbjct: 196 QMKIMMYIMPFMIIAFGMALPAALSLYWVIGNIISIFQNLYIYK 239 >gi|126651992|ref|ZP_01724184.1| OxaA-like protein precursor [Bacillus sp. B14905] gi|126591261|gb|EAZ85370.1| OxaA-like protein precursor [Bacillus sp. B14905] Length = 256 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 23/224 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W FI P+ + YF L+G + I+ T+ ++L PL KQ S+ M+ IQPK+ Sbjct: 36 WNEFIVWPLVSAIKYFAELLGTYAWGIIAVTIIIRLAILPLMIKQTKSSKKMQEIQPKLK 95 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 EL++K+ Q Q+ M++L +NPLAGC P+++Q+P+ Y IS Sbjct: 96 ELQKKYASKDAQTQQQYQQEMMKLMSESGVNPLAGCLPVIIQMPILIGFYHAISR----- 150 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + + D N F P I L FI ++ P + Sbjct: 151 -------MNATSTFDLGNFFIFPLADP--------APALAITAGLMQFIVLRTGPAMDNP 195 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +++ MP + + + PA L +YW N+ISI Q I K Sbjct: 196 QMKIMMYIMPFMIIAFGMALPAALSLYWVIGNIISIFQNLYIYK 239 >gi|257087831|ref|ZP_05582192.1| preprotein translocase subunit YidC [Enterococcus faecalis D6] gi|256995861|gb|EEU83163.1| preprotein translocase subunit YidC [Enterococcus faecalis D6] Length = 275 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 28/251 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +I + + L G+ GI I+L T+ ++++ PL Q S + +QP++ Sbjct: 35 IWDRYIVYYFAQAIKFLS-LGGSVGIGIILFTLVIRIILLPLMHFQTKSMRKTQELQPQL 93 Query: 397 DELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ P+ + + +LY +N+NP GC P+L+Q+P+ A+Y+ IS E+ Sbjct: 94 KALQQKYSSKDPETQRLFREEQQRLYAENNVNPYIGCLPLLVQLPIMMALYQAISRVPEL 153 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + + W+ L DP I PI+ ++ F +S Sbjct: 154 K-EGTFMWLS-LDKPDPY-------------------LILPILAAVFTFASTYLSSMSQL 192 Query: 514 KGQA--MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 + A I+N+ MP + F S + L +YW SN Q ++ + Sbjct: 193 ETNASLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTGQTLLLNNPFKIRKEREEAA 252 Query: 571 RSTFSKNYNSQ 581 R ++ + Sbjct: 253 RQAKARERALE 263 >gi|303274404|ref|XP_003056523.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] gi|226462607|gb|EEH59899.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] Length = 511 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 61/237 (25%), Positives = 114/237 (48%), Gaps = 18/237 (7%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 G +I+ TT VK L +P K Q S NM+N+QP+++ +REK++ Q+ + + Sbjct: 145 YPLGSSIIFTTFVVKALTYPFTKVQVESALNMQNLQPQVNAVREKYRDDQEQMNI-EINR 203 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTL 476 LY+ + ++PLAGC P+LL +PV + +Y+ + S++ W +I LA P Sbjct: 204 LYEDNQVSPLAGCGPLLLTLPVVWGLYRAFNNASIDGSFDEPWFFIPSLAGPTPDRSLAW 263 Query: 477 FGIL------PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---------KGQAMILN 521 L P + PI+ S ++ M + P D + Q+ +LN Sbjct: 264 LLPLDDNYQPPLGWHDASLYLVVPILTVASQYVSMSILSPVKDLNDPNTAETEQQSFLLN 323 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 ++P+ + + PAGL +YW ++N+ + Q + + G + +++++ K Sbjct: 324 FLPLFIGYISLTVPAGLTLYWLFNNIFTTATQVYL-RQGGGAVAKVEKIKDVKLKVP 379 >gi|312144701|ref|YP_003996147.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium sp. 'sapolanicus'] gi|311905352|gb|ADQ15793.1| membrane protein insertase, YidC/Oxa1 family [Halanaerobium sp. 'sapolanicus'] Length = 216 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 110/221 (49%), Gaps = 15/221 (6%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F ++ M + + Y +VGN+G+AI++ T+ +K++ +PL KQ S M+ IQP++ Sbjct: 1 MFDWLINGMTYALDFIYGIVGNYGLAIVIFTLIIKIVLYPLTAKQTRSMREMQEIQPEMK 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +++ K++ + Q+ M++LYK H +NP AGC+P+++Q+ + +Y+ I + Sbjct: 61 KIQNKYEDDKEK-QQEEMMKLYKDHGVNPAAGCFPMIVQMAILIPLYRTIFTLGDQMANE 119 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI + P V + + M I ++S + Sbjct: 120 AFLWIGTITQ------------GSLAEPDIAIVLLNAVAMLAQTHITQQIS--GGGEKSN 165 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ MP+ VF PAG+++YW S + ++ QQ V+ K Sbjct: 166 KMMYMMPLFIVFIGFRLPAGVLVYWFVSTLFTVGQQYVLSK 206 >gi|304318135|ref|YP_003853280.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779637|gb|ADL70196.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 218 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I + L+ + Y+ VGN+G+AI++ T+ ++++ P +Q + MK I P +++L++ Sbjct: 4 IGMYLGQLLKFIYDFVGNYGVAIIIFTILIRIVLLPFYVQQMGTMKKMKEINPLVEDLKK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + PQ L + M++LYK N+NP++GC P+LL + + + ++ ++ A + W Sbjct: 64 KYAK-DPQKLNEEMMKLYKEKNVNPMSGCLPMLLPLVILWPLFAMLRNYPAFSTAS-FLW 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 +K LA DP I PI+ ++ +I M D Q + Sbjct: 122 LKSLAEKDPYF-------------------ILPILSGVTTYISSAM--IQTDNSQKSMNL 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M ++ S PAG+ IYW SN+ I QQ ++ Sbjct: 161 IMSAFMIWITVSLPAGIGIYWVTSNIFQIAQQYFFLR 197 >gi|159897293|ref|YP_001543540.1| 60 kDa inner membrane insertion protein [Herpetosiphon aurantiacus ATCC 23779] gi|159890332|gb|ABX03412.1| 60 kDa inner membrane insertion protein [Herpetosiphon aurantiacus ATCC 23779] Length = 311 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 17/225 (7%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F+ + + ++L GN G AI+ T+ V+L PL KQ S + IQPK+ E Sbjct: 1 MNFLGPIFLPFLEWLFHLFGNLGWAIIAFTILVRLGMLPLTLKQLRSQRKIMVIQPKLRE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMR 454 L+ K+ + + L + ++LY+ H NP+ GC P+L+ +P+ F +++ I Sbjct: 61 LQRKYSKDREK-LTQETMKLYREHGANPVGGCLPLLISLPILFGVWQAIQLFGTSVPATA 119 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-PAD 513 + W+ L L I PI+ FI M+ D Sbjct: 120 EQVQFLWLPRLT--------PLIENNVTVNSAHDPYFILPILAIALQFITTLMAMQRNPD 171 Query: 514 KGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 QA ++ +MP +F F FPAG +Y ++I +VQQ Sbjct: 172 PQQASMNKVMMFMPFIFGFIYFQFPAGATLYSVTGSLIQLVQQYF 216 >gi|28379981|ref|NP_786873.1| cell division protein [Lactobacillus plantarum WCFS1] gi|300769104|ref|ZP_07078993.1| stage III sporulation protein J [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308182185|ref|YP_003926313.1| cell division protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|38502978|sp|Q88RX1|OXAA1_LACPL RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|28272822|emb|CAD65751.1| cell division protein [Lactobacillus plantarum WCFS1] gi|300493344|gb|EFK28523.1| stage III sporulation protein J [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308047676|gb|ADO00220.1| cell division protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 277 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 108/266 (40%), Gaps = 33/266 (12%) Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 P + + I ++ ++G+ I++ T+ ++++ PL Q + Sbjct: 25 NTPITDKSTGFWDGLIILNFSRAIIWLSNLFGHSYGLGIIVFTLIIRIIILPLMIFQTRN 84 Query: 386 TANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 M+ +QP++ L++K+ Q LQ M +LY H ++P+A P+L+Q+P+ A Sbjct: 85 MVAMQEVQPQMKALQKKYSSRDMETQQKLQAEMKKLYAKHGVHPMASMLPLLVQLPILIA 144 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y+ I + ++ + W++ L + DP + PI+ ++ F Sbjct: 145 LYQAIWRTQALKTGS-FLWLQ-LGSKDPYY-------------------VLPILAAIFTF 183 Query: 503 IQMKM---SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV---- 555 + S P + + MPV+ + + P+ L +YW SN + Q + Sbjct: 184 ASSWLAMKSQPEQNGMTTSMTYLMPVIILITAINVPSALSLYWVISNAFQVGQTLLLQNP 243 Query: 556 --IMKMHGAEIGLIDRLRSTFSKNYN 579 I + A+ + T K Sbjct: 244 FKINREREAKKQAERDRKRTLEKARK 269 >gi|157363658|ref|YP_001470425.1| 60 kDa inner membrane insertion protein [Thermotoga lettingae TMO] gi|157314262|gb|ABV33361.1| 60 kDa inner membrane insertion protein [Thermotoga lettingae TMO] Length = 443 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 22/229 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W+ + P+ + + + NFG AI++ TV V+ + +PL Q S M+ +QP+ Sbjct: 222 SSWYDPVFYPLVWFFWWLFEMTRNFGWAIIIFTVIVRFVLYPLYHAQTKSMIKMRKVQPR 281 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-MR 454 I+ +R+K+K Q Q+ ++++Y+ INP GC +L+Q+PVFF +Y VI E Sbjct: 282 IEAIRKKYKDPTKQ--QEELMKVYREEGINPAGGCLMLLIQLPVFFLLYAVIRYFQEEFA 339 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + DL+ GF I+ I ++ + ++ + Sbjct: 340 FGSKFLLWNDLSV-----------------GGFGPNAIFIIATVVASYFNTLITSQDSRS 382 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 IL M ++F F S P+GL +Y++ + VI +V I K + + Sbjct: 383 AWQGIL--MSLIFPFLFVSLPSGLFLYYTVNTVIQLVITYYIYKRYKIK 429 >gi|219120081|ref|XP_002180787.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407503|gb|EEC47439.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 467 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 22/229 (9%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 ++G++I + T V+ L PL+ +Q S +K+++P + +++ K+K + + +A + Sbjct: 138 QSWGVSIAIFTTIVRTLLVPLSIEQSKSAEYIKSLKPYVADIKAKYKNN-QEAQNRATAK 196 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYK-VISISLEMRHAPFWGWIKDLAAA-------- 468 LY+ NPLAGC+ L+Q+PVF +Y+ V ++++ + WI L Sbjct: 197 LYEDAQQNPLAGCFVALIQLPVFLGLYRGVRLLAMDGVLEEPFLWIPSLEGPVAPPNFQG 256 Query: 469 -DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----------Q 516 D + G + I P+I+ + + M++ PP D+ Sbjct: 257 LDWLVQGWVNGAPALGWETTLAFLIMPVILVVLQSVTMQVLQPPVDEDATKEERETLERS 316 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 IL ++P++ F PAGL IYW SN+ ++ Q + A Sbjct: 317 QTILKFLPLLIGFFALQVPAGLTIYWFTSNIFTLTQSLAVRAYFSANPP 365 >gi|254558115|ref|YP_003064532.1| cell division protein [Lactobacillus plantarum JDM1] gi|254047042|gb|ACT63835.1| cell division protein [Lactobacillus plantarum JDM1] Length = 277 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 108/266 (40%), Gaps = 33/266 (12%) Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 P + + I ++ ++G+ I++ T+ ++++ PL Q + Sbjct: 25 NTPITDKSTGFWDSLIILNFSRAIIWLSNLFGHSYGLGIIVFTLIIRIIILPLMIFQTRN 84 Query: 386 TANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 M+ +QP++ L++K+ Q LQ M +LY H ++P+A P+L+Q+P+ A Sbjct: 85 MVAMQEVQPQMKALQKKYSSRDMETQQKLQAEMKKLYAKHGVHPMASMLPLLVQLPILIA 144 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 +Y+ I + ++ + W++ L + DP + PI+ ++ F Sbjct: 145 LYQAIWRTQALKTGS-FLWLQ-LGSKDPYY-------------------VLPILAAIFTF 183 Query: 503 IQMKM---SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV---- 555 + S P + + MPV+ + + P+ L +YW SN + Q + Sbjct: 184 ASSWLAMKSQPEQNGMTTSMTYLMPVIILITAINVPSALSLYWVISNAFQVGQTLLLQNP 243 Query: 556 --IMKMHGAEIGLIDRLRSTFSKNYN 579 I + A+ + T K Sbjct: 244 FKINREREAKKQAERDRKRTLEKARK 269 >gi|170018056|ref|YP_001728975.1| preprotein translocase subunit YidC [Leuconostoc citreum KM20] gi|169804913|gb|ACA83531.1| Preprotein translocase subunit YidC [Leuconostoc citreum KM20] Length = 279 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 103/251 (41%), Gaps = 31/251 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +A ++ N+G+ I++ T+ ++ L PL Q S M+ +QP + Sbjct: 43 WSAIVAAFTSSILGTSAWFGNNYGLGIIVFTILIRFLILPLMVYQIQSMMKMQVVQPALK 102 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 L+ K+ Q++ LYK +NP A P+++Q+PV FA+Y+ I S ++ Sbjct: 103 ALQAKYPGKDTESRQLMMAEQQALYKKEGVNPFASMLPLIVQMPVLFALYQSIYNSPVLK 162 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + + W++ L + DP + P++ ++ F +S Sbjct: 163 -SGKFLWLQ-LGSHDPYY-------------------VLPVLAAVFTFASSWLSMQST-P 200 Query: 515 GQAMILNWMPVVF-VFALSS---FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 Q + MP +F V S P+ L +YW N+ +Q + + +I L Sbjct: 201 EQNGMTKAMPYIFPVVIFFSAMAVPSALSLYWVVGNLFQTIQTFFLQ--NPFKIRREREL 258 Query: 571 RSTFSKNYNSQ 581 + ++ + Sbjct: 259 AAQKERDMKRK 269 >gi|307128506|ref|YP_003880536.1| inner membrane protein YidC [Candidatus Sulcia muelleri CARI] gi|306482968|gb|ADM89838.1| inner membrane protein YidC [Candidatus Sulcia muelleri CARI] Length = 520 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 71/476 (14%), Positives = 162/476 (34%), Gaps = 34/476 (7%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 V ++N L SI+ G +L L+ Y +++ + + + + + E Sbjct: 55 VIIENNVLKLSISTIGGNIKNLFLKRYKNYHNNDENLYLI---KDNSSLFGLEFTNKYCK 111 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190 T KL + ++ + + F I ++ Sbjct: 112 KLNTYEVEFIPKIKEDEFKYTINMHAKLDNNVSIYYVYVIYKKNNYNIDFSIRTKGFSDF 171 Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250 + + + K Q N + I L ++ +K ++ ++ Sbjct: 172 LSTNLEWNQKLLRLEKDQKIENNYNKIFYSI-----NKLKKKINFLNQKKNLHKKAKNIY 226 Query: 251 WLGISDKYWASVFIPSK-----ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT 305 W+ +++ S+ + ++ F + H+ + +I K + Sbjct: 227 WIANKQQFFVSILLFKTPLKIYKSKKIIFFLKNENVHSINKISNLKIKIINKNNKEFNLS 286 Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 N + ++ + Y L S N+G+ I+ Sbjct: 287 NKWYFCPLDYNLLKK--NKYGFENLIQFGGGVVKYINRYVFLYLFSILEKTNFNYGLIII 344 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 L T+ VKL+ P+ QY + ++ + + ++L K IN Sbjct: 345 LMTIIVKLIILPITYNQYKLNSIIEIF---------RTSFDDINQNKFKNLKLDKKIVIN 395 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 ++QIP+F++++ + + +R + WI +L D +IF L +P Y Sbjct: 396 ---SILYAIIQIPIFYSLFNLFPTLINLRGKS-FLWIDNLTYYD--SIFNLKFNIPIYGN 449 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 H+ + I+ S+S+ I K++ I M ++ + ++++ +GL +Y Sbjct: 450 ---HISLLTILYSISLLILRKINNSKYKTNNNSI-YIMSIIILLFINNYSSGLYLY 501 >gi|256370584|ref|YP_003108409.1| putative inner membrane protein translocase component YidC [Candidatus Sulcia muelleri SMDSEM] gi|256009376|gb|ACU52736.1| putative inner membrane protein translocase component YidC [Candidatus Sulcia muelleri SMDSEM] Length = 571 Score = 118 bits (294), Expect = 3e-24, Method: Composition-based stats. Identities = 78/493 (15%), Positives = 176/493 (35%), Gaps = 35/493 (7%) Query: 75 NPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE 134 N L S++ G +L L+ L + T + Sbjct: 91 NNVLKLSLSTIGGNIKNLFLKKNPNISIETENFSLL-------KENSSLFGLEFTNKFGK 143 Query: 135 LPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQI 194 + + + K I + + N+ + + + + I + + + + Sbjct: 144 KIETYKLEFIPEIKEDLFKYTINMHAQLEPNVSIDYVYVVYKGNNYYIDFFIKSKGLSEY 203 Query: 195 RFSPRGRIMRHK---PQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSW 251 + T + I+ + + + D +K S ++ W Sbjct: 204 VSKNSLNFEWSQKILNLEKEKTIEKKYTNISFRINSKKNKINFFDKKKYSFKE-LDNLYW 262 Query: 252 LGISDKYWASVF-----IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTN 306 + +++AS+ + + + + + + + + + Sbjct: 263 IANKQQFFASILCFKNQLTIDNSKKILIYSENINSDSELKFSELKIPFLLKKEEELNCDY 322 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL---VGNFGIA 363 + G ++ + + FE +I +G + ++ F N GI Sbjct: 323 KWYFGPLDYHILKQSKD-----GFEQIIPFGKGIAKVLNRYFFLNLFELFEKANINSGII 377 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ VKLL P+ QY M+N + ++ KF +P + +I+ YK Sbjct: 378 IILMTIVVKLLLSPITYSQYKFNFFMQNFFMQNFLMQTKFFLNP-----QILIEFYKKIG 432 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 INP+ ++QIP+F+++ + +R + W K+L+ +D I L +P Y Sbjct: 433 INPIYSLLGNMIQIPIFYSLMNFFPTLINLRGK-RFLWAKNLSYSD--RILNLNFNIPIY 489 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 I+ I++ +F+ K+ I ++ +F +++P+G+ IY+ Sbjct: 490 GNHISLFNIFNILI---LFVFTKIRNRKKFSKTNRIYILFYIMMLFFFNNYPSGIYIYYI 546 Query: 544 WSNVISIVQQAVI 556 SN+I+I+ ++I Sbjct: 547 SSNIINILFYSLI 559 >gi|320333667|ref|YP_004170378.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus maricopensis DSM 21211] gi|319754956|gb|ADV66713.1| membrane protein insertase, YidC/Oxa1 family [Deinococcus maricopensis DSM 21211] Length = 493 Score = 118 bits (294), Expect = 3e-24, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 25/238 (10%) Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 + L F I+ + M + Y+++ N+G+ I++ TV ++ +PL + Sbjct: 255 HLYQEGYTTLPDLFRPNIFGQISLLIVKFMEWLYSVLHNWGLVILVLTVVLRAAIWPLMQ 314 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 Q +TA M+ +QPK+ E++EK+K PQ +Q +++Y+ +N+NP GC + P+ Sbjct: 315 TQGKTTARMQLLQPKLKEVQEKYKD-DPQKMQAETMRMYREYNVNPA-GCLSSFIPFPIL 372 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A++ I E GW+ DL+ DP I + L ++ P Sbjct: 373 IALWSTIRN-FEF--DSGLGWLPDLSIPDPLYILAALYVAVNLLQLYVSTRKSP-----E 424 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MF Q ++ ++F + +FPAG+ +YW S VI +QQ I + Sbjct: 425 MFRQQS---------------FIYLIFAYFALTFPAGVTLYWIISTVIGTIQQVFINR 467 >gi|296875720|ref|ZP_06899785.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis ATCC 15912] gi|296433290|gb|EFH19072.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis ATCC 15912] Length = 279 Score = 118 bits (294), Expect = 3e-24, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 34/236 (14%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---P 408 F + GN G+ I++ T+ ++ + PL + Q ST M+ IQP + EL+ K+ Sbjct: 54 RFLSFGGNIGVGIIVFTIVIRTVLLPLFQYQMNSTRKMQEIQPLLKELQAKYPGKDLDSR 113 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + M LYK + + P+L+Q+PV A+++ +S +E + W+ DL A Sbjct: 114 TKLSEEMRALYKEKGVKTSSAFLPLLIQMPVLMALFQALSR-VEFLKVGHFLWL-DLGAI 171 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPV 525 DPT I P++ +L F ++ P + ++ MPV Sbjct: 172 DPTY-------------------ILPVLAALFTFFSSWLTNKAMPERNGSATTMMYVMPV 212 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + F +G+ +YW SN + Q ++ + +K S+ Sbjct: 213 MIFFFALFSASGVALYWVTSNAYQVGQTYLLN-------NPFKIIAEREAKEQASR 261 >gi|238855503|ref|ZP_04645808.1| membrane protein OxaA 1 [Lactobacillus jensenii 269-3] gi|260665207|ref|ZP_05866056.1| stage III sporulation protein J [Lactobacillus jensenii SJ-7A-US] gi|282931529|ref|ZP_06337028.1| stage III sporulation protein J [Lactobacillus jensenii 208-1] gi|313472762|ref|ZP_07813250.1| stage III sporulation protein J [Lactobacillus jensenii 1153] gi|238831869|gb|EEQ24201.1| membrane protein OxaA 1 [Lactobacillus jensenii 269-3] gi|260560944|gb|EEX26919.1| stage III sporulation protein J [Lactobacillus jensenii SJ-7A-US] gi|281304336|gb|EFA96439.1| stage III sporulation protein J [Lactobacillus jensenii 208-1] gi|313448863|gb|EEQ68258.2| stage III sporulation protein J [Lactobacillus jensenii 1153] Length = 285 Score = 118 bits (294), Expect = 3e-24, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 114/283 (40%), Gaps = 40/283 (14%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + W + L+ L N+G I++ T+ V+LL F Sbjct: 25 VLTGCANSTGHVSHTSGSWWDRYVIF-YFSQFLLWLADLLGKNYGWTIIVFTILVRLLLF 83 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPI 433 PL ST + +QP+ID+LR K+ + Q+L +LYK INP GC+P+ Sbjct: 84 PLNAISIKSTTKQQQLQPEIDKLRAKYPGNDAESRQLLNAETQKLYKEAGINPYLGCFPM 143 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 LLQ+P FA+Y+ I + ++ + W+ +L+ ADP + Sbjct: 144 LLQLPFMFALYQAIYSTKQL-QDGTFLWM-NLSKADPYY-------------------VM 182 Query: 494 PIIMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 PI+ ++ F+ QM + ++ P++ SFP + +YW S++ Sbjct: 183 PILAAVFTFMSSYVAQMSAPESSSQSMTKAMMWITPLIVAVPAISFPTAITLYWVVSSIF 242 Query: 549 SIVQQAVIMK----------MHGAEIGLIDRLRSTFSKNYNSQ 581 S++Q ++ AE ++R + K + Sbjct: 243 SVIQTFILQNPFKYAREQEAKKQAEKERQRKIRRAYKKINRKK 285 >gi|9743337|gb|AAF97961.1|AC000103_11 F21J9.16 [Arabidopsis thaliana] Length = 519 Score = 118 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 109/268 (40%), Gaps = 20/268 (7%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + + Y A + ++ + + V ++ + Q S MK++ Sbjct: 117 TVHVPYSYGFAIILLTVLVKAATFPLTKKQVFTMISFLVHVIELVVYSLQVESAMAMKSL 176 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SL 451 P+I ++E++ ++ +LYK INPLAGC P L IPV+ +Y+ +S + Sbjct: 177 TPQIKAIQERYAGDQEKIQL-ETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVAD 235 Query: 452 EMRHAPFWGWIKDLAAADP-------TNIFTLF----GILPFYLPGFMHVGIWPIIMSLS 500 E + WI LA + I LF G P P + + P+++ S Sbjct: 236 EGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFIEGHPPLGWPDTLAYLVLPLLLVFS 295 Query: 501 MF--IQMKMSPPPADKGQ---AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + IQ+ S D + +P++ + S P+GL +YW +N++S QQ Sbjct: 296 QYLSIQIMQSSQSNDPAMKSSQAVTKLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVW 355 Query: 556 IMKMHGAE--IGLIDRLRSTFSKNYNSQ 581 + K GA+ + L + K + Sbjct: 356 LQKYGGAKNPVEKFTNLVTKEDKTQQIE 383 >gi|271970552|ref|YP_003344748.1| Preprotein translocase subunit YidC-like protein [Streptosporangium roseum DSM 43021] gi|270513727|gb|ACZ92005.1| Preprotein translocase subunit YidC-like protein [Streptosporangium roseum DSM 43021] Length = 316 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 25/227 (11%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + + I+ TV ++LL FPL KQ S+ M+ + PK+ ELR+++K Q + + ++ LY Sbjct: 36 WALTIITLTVLMRLLIFPLFLKQMRSSKKMQELAPKVQELRKRYKNDK-QRMNQEVMALY 94 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL----------AAAD 469 + NPL GC PI+ Q P+F +++ V+ +G + L A Sbjct: 95 QGQGANPLGGCLPIVAQFPIFISMFTVLQAMAN--GQLKFGMTQHLVDSARAAHIFGAPL 152 Query: 470 PTNIFTLFGILPFYLP----GFMHVGIWPIIMSLSMFIQ--------MKMSPPPADKGQA 517 P +T + + + I+ I SL+ F+ M P Q Sbjct: 153 PATFWTSSADIIKLGADPVVTKVVLAIFVAISSLTTFLTVRQSVTRSMAQMPDNPMAQQQ 212 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 IL ++ +F +FP GLI+YW +N+ ++ QQ + + + Sbjct: 213 KILMYISPLFAIFSLNFPLGLILYWVTTNLWTLGQQHWFYSRNPSPV 259 >gi|282934245|ref|ZP_06339522.1| stage III sporulation protein J [Lactobacillus jensenii 208-1] gi|281301719|gb|EFA93986.1| stage III sporulation protein J [Lactobacillus jensenii 208-1] Length = 285 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 65/283 (22%), Positives = 115/283 (40%), Gaps = 40/283 (14%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + W + L+ L N+G I++ T+ V+LL F Sbjct: 25 VLTGCANNTGNVSHTSGSWWDRYVI-YYFSQFLLWLADLLGKNYGWTIIVFTILVRLLLF 83 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPI 433 PL ST + +QP+ID+LR K+ + Q+L +LYK INP GC+P+ Sbjct: 84 PLNAISIKSTTKQQQLQPEIDKLRAKYPGNDAESRQLLNAETQKLYKEAGINPYLGCFPM 143 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 LLQ+P FA+Y+ I + ++ + W+ +L+ ADP + Sbjct: 144 LLQLPFMFALYQAIYSTKQL-QDGTFLWM-NLSKADPYY-------------------VM 182 Query: 494 PIIMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 PI+ ++ F+ QM + ++ P++ SFP + +YW S++ Sbjct: 183 PILAAVFTFMSSYVAQMSAPESSSQSMTKAMMWITPLIVAVPAISFPTAITLYWVVSSIF 242 Query: 549 SIVQQAVIMK----------MHGAEIGLIDRLRSTFSKNYNSQ 581 S+VQ ++ AE ++R + K + Sbjct: 243 SVVQTFILQNPFKYAREQEAKKQAEKERQRKIRRAYKKLNRKK 285 >gi|326202768|ref|ZP_08192635.1| membrane protein insertase, YidC/Oxa1 family [Clostridium papyrosolvens DSM 2782] gi|325986845|gb|EGD47674.1| membrane protein insertase, YidC/Oxa1 family [Clostridium papyrosolvens DSM 2782] Length = 280 Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 120/277 (43%), Gaps = 50/277 (18%) Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 F I +P+ + + YN + N+G+A+++ T+ ++ PL KQY S+A M+ +QP Sbjct: 1 MFDVIIRPLGQFLYWIYNTIAFHNYGLALVIFTIIIRAAMIPLTLKQYKSSAEMQKVQPL 60 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL---- 451 + E++ K+ + L + M++LY+ H INP GC P+L+Q+P+ ++++ I+ L Sbjct: 61 LQEIQRKYANDKAK-LNEEMMKLYQEHKINPAGGCLPLLIQMPILLSLWQAITKPLKYML 119 Query: 452 --------EMRHAPFWGWIKDLAAADPTNIFTLFGILP---------------------- 481 + A + + F G Sbjct: 120 GFTPEQLKNLAEASNIPINSAYSEINTITHFMSIGQGSKVGNLNMFFPSHGFGINLGDIP 179 Query: 482 -------FYLPGFMHVGIWPIIMSLSMFIQMKMSPP------PADKGQAMILNWMPVVFV 528 P + + + PII +++ ++ ++MS P A+ ++ P++ + Sbjct: 180 TWHFNKIMSEPKYAVLLLLPIIATITTYLSVRMSMPKATSDKAANPMGNSMMYVSPIMTL 239 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 FPAGL +YW NV +IVQQ + K + Sbjct: 240 LFSFQFPAGLALYWITGNVFAIVQQYYVNKYVLKKKE 276 >gi|256851671|ref|ZP_05557059.1| stage III sporulation protein J [Lactobacillus jensenii 27-2-CHN] gi|260661612|ref|ZP_05862524.1| stage III sporulation protein J [Lactobacillus jensenii 115-3-CHN] gi|297205280|ref|ZP_06922676.1| stage III sporulation protein J [Lactobacillus jensenii JV-V16] gi|256615629|gb|EEU20818.1| stage III sporulation protein J [Lactobacillus jensenii 27-2-CHN] gi|260547669|gb|EEX23647.1| stage III sporulation protein J [Lactobacillus jensenii 115-3-CHN] gi|297149858|gb|EFH30155.1| stage III sporulation protein J [Lactobacillus jensenii JV-V16] Length = 290 Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats. Identities = 65/283 (22%), Positives = 115/283 (40%), Gaps = 40/283 (14%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + W + L+ L N+G I++ T+ V+LL F Sbjct: 30 VLTGCANNTGNVSHTSGSWWDRYVI-YYFSQFLLWLADLLGKNYGWTIIVFTILVRLLLF 88 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPI 433 PL ST + +QP+ID+LR K+ + Q+L +LYK INP GC+P+ Sbjct: 89 PLNAISIKSTTKQQQLQPEIDKLRAKYPGNDAESRQLLNAETQKLYKEAGINPYLGCFPM 148 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 LLQ+P FA+Y+ I + ++ + W+ +L+ ADP + Sbjct: 149 LLQLPFMFALYQAIYSTKQL-QDGTFLWM-NLSKADPYY-------------------VM 187 Query: 494 PIIMSLSMFI-----QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 PI+ ++ F+ QM + ++ P++ SFP + +YW S++ Sbjct: 188 PILAAVFTFMSSYVAQMSAPESSSQSMTKAMMWITPLIVAVPAISFPTAITLYWVVSSIF 247 Query: 549 SIVQQAVIMK----------MHGAEIGLIDRLRSTFSKNYNSQ 581 S+VQ ++ AE ++R + K + Sbjct: 248 SVVQTFILQNPFKYAREQEAKKQAEKERQRKIRRAYKKLNRKK 290 >gi|227891666|ref|ZP_04009471.1| stage III sporulation protein J precursor [Lactobacillus salivarius ATCC 11741] gi|227866469|gb|EEJ73890.1| stage III sporulation protein J precursor [Lactobacillus salivarius ATCC 11741] Length = 263 Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 30/228 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + ++ GN +G I++ T+ V+++ PL Q S +QPK+ Sbjct: 22 WDHYIVWNFIRAIQGLSHIFGNSYGWGIVIFTIIVRIIILPLMIYQMKSMRQTMELQPKL 81 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ Q+L K +LY INP A P+++Q+P+ FA+Y+ I S + Sbjct: 82 KALQEKYPGKDMESRQMLAKEQQKLYSEAGINPFASMLPLIVQMPILFALYQAIFRSDVL 141 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + + + W++ L DP I PI+ ++ ++ K++ A Sbjct: 142 K-SGTFFWMQ-LGDKDPYY-------------------ILPILAAVFTWLTSKLN-SMAQ 179 Query: 514 KGQAMI---LNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q I + W MP++ + PA L +YW +N+ S Q +I Sbjct: 180 PEQNTITTVMTWSMPIMIFVFALNVPAALSLYWVITNLFSAGQTLLIN 227 >gi|322373859|ref|ZP_08048394.1| membrane protein [Streptococcus sp. C150] gi|321277231|gb|EFX54301.1| membrane protein [Streptococcus sp. C150] Length = 305 Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 105/259 (40%), Gaps = 39/259 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM----KN 391 W W ++ + NL FG+ I+ T+ V+L+ PL Q A + Sbjct: 36 WVWNLLGRPMSHIITYFANNLGLGFGLGIVFVTIIVRLIILPLGLHQSRGAAYQAAKREY 95 Query: 392 IQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 + P ++ + E+ + + Q + ++Q + + ++ + GC P+L+Q+P F A+Y Sbjct: 96 LAPILEPINERLRNAETQEEKMAAQSELMQAQRENGVSLMGGVGCLPLLIQLPFFSALYY 155 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + H + W +L + D II++ + Q Sbjct: 156 AARYTPGVLH-DHFLWF-NLNSRD---------------------FPLIIIIAALYYFQS 192 Query: 506 KMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +S + Q + MP++ + S PA +I+YW + SI+QQ + + Sbjct: 193 WLSIQQVPEEQRKQMAVTMYSMPIMMIVFGISSPAAVILYWFVGGIFSIIQQLITN--YI 250 Query: 562 AEIGLIDRLRSTFSKNYNS 580 + L +++ F+KN Sbjct: 251 IKPRLQEKVAEEFAKNPPK 269 >gi|282858213|ref|ZP_06267403.1| preprotein translocase subunit YidC [Pyramidobacter piscolens W5455] gi|282583944|gb|EFB89322.1| preprotein translocase subunit YidC [Pyramidobacter piscolens W5455] Length = 308 Score = 117 bits (292), Expect = 6e-24, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 107/248 (43%), Gaps = 22/248 (8%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ++ +F +++ Y++ GN+G AI+ TV V+L PL KQ S M+ +QP++ Sbjct: 1 MWKALSDYLFQFLNFLYSMTGNWGWAIVALTVIVRLALHPLNAKQMRSMQQMQRLQPRLK 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L+EK+ L + + LYK + +NP +GC P+++Q+P+ ++ V+ + Sbjct: 61 VLQEKYANDRDT-LSRETMALYKENKVNPASGCLPLIIQLPILILLFNVLRDASAQFGES 119 Query: 458 FW----GWIKDLAA----------------ADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 + L++ D + ++ + + + Sbjct: 120 TFCGVPLAGTVLSSIAKAVGFSGDPLTAGFMDTCRAVGANPAGLSAVGVWLPITFLLLFI 179 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + Q K+S + A + MP+ F S P GL++YW S++ +++QQ + Sbjct: 180 VFLTWYQQKLS-AQGNPQMATMNVVMPIFMGFICLSMPGGLLLYWMLSSLFAVIQQWFTV 238 Query: 558 KMHGAEIG 565 E Sbjct: 239 HKVAKEEK 246 >gi|228476491|ref|ZP_04061181.1| membrane protein OxaA 2 [Streptococcus salivarius SK126] gi|228251912|gb|EEK10958.1| membrane protein OxaA 2 [Streptococcus salivarius SK126] Length = 305 Score = 117 bits (292), Expect = 6e-24, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 104/255 (40%), Gaps = 31/255 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM----KN 391 W W ++ + NL FG+ I+ T+ V+L+ PL Q S A + Sbjct: 36 WVWNLLGRPMSHVITYFADNLGLGFGLGIIFVTIIVRLIILPLGLHQSRSAAYQSAKREY 95 Query: 392 IQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 + P ++ + E+ + + Q + ++Q + + ++ + GC P+L+Q P F A+Y Sbjct: 96 LAPILEPINERLRNAETQEEKMAAQSELMQAQRENGLSLMGGVGCLPLLIQFPFFSALYY 155 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + W +L D F + I + ++ + Sbjct: 156 AARYTPGVLQ-DNFLWF-NLGHRD-----------------FPLIIIIAALYYFQSWLSI 196 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + P K A + MP++ +F S PA +I+YW + SI+QQ + + + Sbjct: 197 QQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWFVGGIFSIIQQLITN--YIIKPR 254 Query: 566 LIDRLRSTFSKNYNS 580 L +++ F KN Sbjct: 255 LKEKVAEEFKKNPPK 269 >gi|301300482|ref|ZP_07206681.1| putative stage III sporulation protein J [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851929|gb|EFK79614.1| putative stage III sporulation protein J [Lactobacillus salivarius ACS-116-V-Col5a] Length = 263 Score = 117 bits (292), Expect = 6e-24, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 30/228 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + ++ GN +G I++ T+ V+++ PL Q S +QPK+ Sbjct: 22 WDHYIVWNFIRAIQGLSHIFGNSYGWGIVIFTIIVRIIILPLMIYQMKSMRQTMELQPKL 81 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ Q+L K +LY INP A P+++Q+P+ FA+Y+ I S + Sbjct: 82 KALQEKYPGKDMESRQMLAKEQQKLYSEAGINPFASILPLIVQMPILFALYQAIFRSDVL 141 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + + + W++ L DP I PI+ ++ ++ K++ A Sbjct: 142 K-SGTFFWMQ-LGDKDPYY-------------------ILPILAAIFTWLTSKLN-SMAQ 179 Query: 514 KGQAMI---LNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q I + W MP++ + PA L +YW +N+ S Q +I Sbjct: 180 PEQNTITTVMTWSMPIMIFVFALNVPAALSLYWVITNLFSAGQTLLIN 227 >gi|258541100|ref|YP_003175599.1| stage III sporulation protein J [Lactobacillus rhamnosus Lc 705] gi|257152776|emb|CAR91748.1| Stage III sporulation protein J [Lactobacillus rhamnosus Lc 705] Length = 278 Score = 117 bits (292), Expect = 6e-24, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 21/252 (8%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P E + Y + ++ GN G+ I+ T+ +++L FPL+ S A Sbjct: 29 PVSENSTGFWDRYVVYTAGQFVIWLANLFGGNPGVGIIAFTLIIRILIFPLSYLSIKSMA 88 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 + I P++ EL++K+ + K +LY + +NP+ GC PI++Q+P A+Y Sbjct: 89 KQQEIAPQLKELQKKYSSKDTETQTKLRDETQKLYASAGVNPVMGCLPIVIQMPFLIALY 148 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + I + + + + W+ +L+ DP I I + +L I Sbjct: 149 QAILRTSSL-QSGTFLWM-NLSQPDPLWIMQ----------------ILATLFTLGTSIL 190 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M+ P + +++ P + + P+ L IY +N S+VQQ +I Sbjct: 191 SMMAQPTRNSSSWVMMIISPAMIFVFSVTLPSALAIYSVVTNAFSMVQQLLIQNPFKIRR 250 Query: 565 GLIDRLRSTFSK 576 ++ R+ K Sbjct: 251 EREEKARAEKEK 262 >gi|315654393|ref|ZP_07907301.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315491428|gb|EFU81045.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] Length = 441 Score = 117 bits (291), Expect = 7e-24, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 28/256 (10%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 GW M L + +AI+ T+ V+L+ PL KQ ++ M QP+ Sbjct: 28 VGWILRGVHEMITLFGVESGAGIGWVLAIVGMTIVVRLIIVPLFIKQIKASRAMSLAQPE 87 Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + + +K+K Q Q+ M + K + + A C P+L+Q+PV FA+Y+++ Sbjct: 88 LTAITKKYKGKRDQQTMMRQQEEMKAVQKKYGASMSASCLPLLVQMPVLFALYRLLYYMS 147 Query: 452 EMRHAPF--------WGWIKDLAAADPTNIFTLFGILPFYLPGF----MHVGIWPIIMSL 499 + H G + A D T G F + +GI + + Sbjct: 148 AVAHGTMPEHDSIGGMGQQQAKALWDSTFFGESLGQTMFGPTSTLQTKIVIGIMVAFLVI 207 Query: 500 SMFIQMK-MSPPPADKGQ-----------AMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 +MF+Q +S Q ++ +MP+V++F GL+IYW SN Sbjct: 208 TMFVQTAFLSMKNMSDEQLNSDNPMVKSTKSMMYFMPLVYLFTGPVVQVGLLIYWVTSNT 267 Query: 548 ISIVQQAVIMKMHGAE 563 S+VQQ +++ + Sbjct: 268 WSLVQQYFMIRAYPTR 283 >gi|90962705|ref|YP_536621.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118] gi|90821899|gb|ABE00538.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118] Length = 279 Score = 117 bits (291), Expect = 7e-24, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 30/228 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + ++ GN +G I++ T+ V+++ PL Q S +QPK+ Sbjct: 38 WDHYIVWNFIRAIQGLSHIFGNSYGWGIVIFTIIVRIIILPLMIYQMKSMRQTMELQPKL 97 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+EK+ Q+L K +LY INP A P+++Q+P+ FA+Y+ I S + Sbjct: 98 KALQEKYPGKDMESRQMLAKEQQKLYSEAGINPFASMLPLIVQMPILFALYQAIFRSDVL 157 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + + + W++ L DP I PI+ ++ ++ K++ A Sbjct: 158 K-SGTFFWMQ-LGDKDPYY-------------------ILPILAAIFTWLTSKLN-SMAQ 195 Query: 514 KGQAMI---LNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q I + W MP++ + PA L +YW +N+ S Q +I Sbjct: 196 PEQNTITTVMTWSMPIMIFVFALNVPAALSLYWVITNLFSAGQTLLIN 243 >gi|327438165|dbj|BAK14530.1| preprotein translocase subunit YidC [Solibacillus silvestris StLB046] Length = 260 Score = 117 bits (291), Expect = 7e-24, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 23/234 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + F N+ AI++ TV ++L+ PL KQ S+ M+ +QPK+ E Sbjct: 41 VWPLVSFIKLFADMFEGNAANYAFAIIIVTVIIRLIILPLTIKQVKSSKKMQEMQPKLKE 100 Query: 399 LREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 L+ K+ Q Q+ M+QL +T +NPLAGC PIL+Q+P+ Y IS Sbjct: 101 LQAKYSSKDAATQQKYQQEMMQLMQTSGVNPLAGCLPILIQMPILIGFYHAISRMN---- 156 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 A D F +P P ++ +I L ++ + P + Sbjct: 157 ----------ATPD-AFELGTFLAVPLAEPSI----VFAVIAGLIQYVVLMTGPAVDNPQ 201 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM-HGAEIGLID 568 +++ MP++ V PA L +YW N +S++Q VI K + + D Sbjct: 202 MKIMMYIMPLMIVGFGIILPAALSLYWVVGNFVSVLQNLVIYKPWNKNKPDATD 255 >gi|312864045|ref|ZP_07724281.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus vestibularis F0396] gi|311100458|gb|EFQ58665.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus vestibularis F0396] Length = 305 Score = 116 bits (290), Expect = 9e-24, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 31/255 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM----KN 391 W W ++ + NL FG+ I+ T+ V+L+ PL Q S A + Sbjct: 36 WVWNLLGRPMSHVITYFANNLGLGFGLGIIFVTIIVRLIILPLGLHQSRSAAYQSAKREY 95 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 + P ++ + E+ + + Q Q ++Q + + ++ + GC P+L+Q P F A+Y Sbjct: 96 LAPILEPINERLRNAKTQEEKLAAQSELMQAQRENGLSLMGGVGCLPLLIQFPFFSALYY 155 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + W +L D F + I + ++ + Sbjct: 156 AARYTPGVL-KDDFLWF-NLGHRD-----------------FPLIIIIAALYYFQSWLSV 196 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + P K A + MP++ +F S PA +I+YW + SI+QQ + + + Sbjct: 197 QQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWFVGGIFSIIQQLITN--YIIKPR 254 Query: 566 LIDRLRSTFSKNYNS 580 L +++ F KN Sbjct: 255 LKEKVAEEFKKNPPK 269 >gi|322517496|ref|ZP_08070369.1| membrane protein [Streptococcus vestibularis ATCC 49124] gi|322123978|gb|EFX95537.1| membrane protein [Streptococcus vestibularis ATCC 49124] Length = 305 Score = 116 bits (290), Expect = 9e-24, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 105/255 (41%), Gaps = 31/255 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM----KN 391 W W ++ + +NL FG+ I+ T+ V+L+ PL Q S A + Sbjct: 36 WVWNLLGRPMSHVITYFAHNLNLGFGLGIIFVTIIVRLIILPLGLHQSRSAAYQSAKREY 95 Query: 392 IQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 + P ++ + E+ + + Q + ++Q + + ++ + GC P+L+Q P F A+Y Sbjct: 96 LAPVLEPINERLRNAETQEEKMAAQSELMQAQRENGLSLMGGVGCLPLLIQFPFFSALYY 155 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + W +L D F + I + ++ + Sbjct: 156 AARYTPGVL-KDDFLWF-NLGHRD-----------------FPLIIIIAALYYFQSWLSI 196 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + P K A + MP++ +F S PA +I+YW + SI+QQ + + + Sbjct: 197 QQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWFVGGIFSIIQQLITN--YIIKPR 254 Query: 566 LIDRLRSTFSKNYNS 580 L +++ F KN Sbjct: 255 LKEKVAEEFKKNPPK 269 >gi|312867510|ref|ZP_07727718.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parasanguinis F0405] gi|311096916|gb|EFQ55152.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parasanguinis F0405] Length = 293 Score = 116 bits (290), Expect = 9e-24, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 34/236 (14%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---P 408 F + G+ G+ I++ T+ ++ + PL + Q ST M+ IQP + EL+ K+ Sbjct: 46 RFLSFGGSIGVGIIVFTIVIRTVLLPLFQYQMNSTRKMQEIQPLLKELQAKYPGKDLDSR 105 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + M LYK + + P+L+Q+PV A+++ +S +E + W+ DL A Sbjct: 106 TKLSEEMRALYKEKGVKTSSAFLPLLIQMPVLMALFQALSR-VEFLKVGHFLWL-DLGAI 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPV 525 DPT I P++ +L F ++ P + ++ MPV Sbjct: 164 DPTY-------------------ILPVLAALFTFFSSWLTNKAMPERNGSATTMMYVMPV 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + F +G+ +YW SN + Q ++ + +K S+ Sbjct: 205 MIFFFALFSASGVALYWVTSNAYQVGQTYLLN-------NPFKIIAEREAKEQASR 253 >gi|134103814|ref|YP_001109475.1| putative inner membrane protein translocase component YidC [Saccharopolyspora erythraea NRRL 2338] gi|291005728|ref|ZP_06563701.1| putative inner membrane protein translocase component YidC [Saccharopolyspora erythraea NRRL 2338] gi|133916437|emb|CAM06550.1| preprotein translocase YidC subunit [Saccharopolyspora erythraea NRRL 2338] Length = 336 Score = 116 bits (290), Expect = 9e-24, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 99/259 (38%), Gaps = 26/259 (10%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F +F + ++ + ++++ ++ L F Q S Sbjct: 3 DFIYYPVSAILWFWHEVFGFVLDPASGFA--WALSVVFLVFTLRALLFKPFVHQVRSMKK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ P I L+EK+ Q + + M +L H NP++GC P+L+Q+PVF ++ V++ Sbjct: 61 MQEFAPHIKALQEKYGD-DRQKMAQEMQKLQAEHGFNPVSGCLPMLVQVPVFIGLFHVLN 119 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTL------------FGILPFYLPGFMHVGI-WPI 495 + + +D+A+ ++F + VG+ I Sbjct: 120 GFRPGAPSNYVFGAEDVASFVEADLFGAKLSNTISQAPEMLAHFQTDRTSMLLVGVPLMI 179 Query: 496 IMSLSMFIQ-----MKMSPPPADKGQAMILNWMPV----VFVFALSSF-PAGLIIYWSWS 545 +++ + + A Q ++N M + +F F P ++IYW + Sbjct: 180 AAAIATHFTARHGVQRQTAEAAQNPQTAVMNRMTLWLFPMFAIIGGPFLPLAILIYWLAN 239 Query: 546 NVISIVQQAVIMKMHGAEI 564 N ++ QQ V+ + E Sbjct: 240 NFWTLGQQRVVYRRIDREE 258 >gi|167759573|ref|ZP_02431700.1| hypothetical protein CLOSCI_01930 [Clostridium scindens ATCC 35704] gi|167662800|gb|EDS06930.1| hypothetical protein CLOSCI_01930 [Clostridium scindens ATCC 35704] Length = 360 Score = 116 bits (290), Expect = 9e-24, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 112/268 (41%), Gaps = 23/268 (8%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W + +L S + G G++I++ T+ V PL KQ + + P+ Sbjct: 24 WLLGKVMNFIYTILDSILPSDSGLVGLSIIIYTILVYTCMMPLTIKQQRTAKMSSVMNPE 83 Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--- 448 + +++K+K Q Q+ M Q+Y + + GC P+L+Q+P FA+Y VI Sbjct: 84 LQAIQKKYKNKRDQASMLKQQEEMQQVYDKYGTSMTGGCLPLLIQMPFLFALYPVIYDIQ 143 Query: 449 -ISLEMRHAPF----WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 +++AP + I +L + I + + PII L+ ++ Sbjct: 144 TYVPAIKNAPDAVNRFITIPNLTVSPTVMIKNSGDYGLPAAVIIVTAILLPIISGLTQYL 203 Query: 504 QMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +++S P + MP+ +F + + P G+ +YW S V+ VQQ Sbjct: 204 SIRLSQSISGQQLDKDNPMAGTMKTMNMTMPLFSIFMVFTLPTGIGLYWIISAVVRCVQQ 263 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +I K H +++ + D + K + Sbjct: 264 LMINK-HLSKMSVDDLIEKNREKAAKKR 290 >gi|115757016|ref|XP_790253.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115961418|ref|XP_001176925.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 441 Score = 116 bits (290), Expect = 9e-24, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 83/210 (39%), Gaps = 37/210 (17%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ-------SPPQVLQ 412 + +I++ T+ V+ FPL K T + N P ++ ++ Sbjct: 165 WWASIVVGTLIVRACVFPLMLKNMKYTIRLNNCMPIFQKISKEMNDAKACGDQFEMTRKS 224 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468 + Q K +++NPL ILLQ P+F + ++ ++ +E W DL + Sbjct: 225 MELQQFMKKNDVNPLKSFAGILLQAPIFISFFIGLRRMATLPVESMQTGGLWWFTDLTTS 284 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM------SPPPADKGQAMILNW 522 DP P+I SLSMF+ M++ S A K +L Sbjct: 285 DPYY-------------------ALPVIASLSMFLVMELGGEAGVSNAQAQKM-RNVLRV 324 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 MP V + ++S P + YW SN S+ Q Sbjct: 325 MPFVVLPFIASLPKAVFCYWLTSNFFSVFQ 354 >gi|320095103|ref|ZP_08026812.1| membrane protein OxaA [Actinomyces sp. oral taxon 178 str. F0338] gi|319977970|gb|EFW09604.1| membrane protein OxaA [Actinomyces sp. oral taxon 178 str. F0338] Length = 447 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 111/234 (47%), Gaps = 31/234 (13%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAM 415 + ++I+L T+ V++ PL KQ S+ M+ +QP+I +++EK+K Q + + Sbjct: 37 WVLSIVLLTILVRVAIVPLLLKQIRSSRAMQAVQPEIRKIQEKYKGKKDMVSRQKMTEET 96 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH---------APFWGWIKDLA 466 LY+ H ++P A C P+L+Q+PV FA+Y+ I ++ A G I Sbjct: 97 QALYRKHKVSPFASCLPLLVQMPVLFAMYRAIYAVKDLAEGTYTYSGQAASSLGPITQTT 156 Query: 467 AADPTNIFTLFGILPFYL--------PGFMHVGIWPIIMSLSMFIQMKM----SPP---- 510 A++ N T+FG+ + + + I+M F+ M++ + P Sbjct: 157 ASE-INGSTVFGVPLSHTLRTETSNSSAAIVFVVAIILMVALQFVSMRLSFSRNMPDMGS 215 Query: 511 -PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P + Q ++ MPV+FVF+ F G+++Y S+ ++ Q +K+ Sbjct: 216 NPMARSQRSMMYVMPVMFVFSGVFFQMGVVVYTVTSSFWALGQAYWTIKVMPTP 269 >gi|157114183|ref|XP_001652200.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes aegypti] gi|108877434|gb|EAT41659.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes aegypti] Length = 422 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 95/269 (35%), Gaps = 48/269 (17%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLT-TVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + M + + ++ T+ V+L+ FPL + A M N P++ Sbjct: 119 WTPVGIVQNCMEFLHVGCDLPWWGVIAIGTICVRLVLFPLVIASQRNAAKMNNHMPQMQV 178 Query: 399 LREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVI 447 L+ K ++ + M+ K N+NPL L Q P+F + ++ Sbjct: 179 LQMKMTEARQAGNSIDSARYAQEMVAFMKEKNLNPLKNMLVPLAQAPIFISFFMGLRQMA 238 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + +E W DL D PII S++MF+ +++ Sbjct: 239 NTPVESMREGGLFWFTDLTVCDQFY-------------------ALPIITSITMFLTIEL 279 Query: 508 SP----PPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ--------- 552 A Q + +L MP+ +FP ++ YW+ SN S++Q Sbjct: 280 GTDSARMSAQNMQMVRYVLRAMPLFIFPFTINFPGAILCYWACSNFFSLLQVGFLRIPKV 339 Query: 553 --QAVIMKMHGAEIGLIDRLRSTFSKNYN 579 I ++ + + + F++ Sbjct: 340 RDYFKIERLVTHKPETLPIKKKKFTEGMK 368 >gi|171779011|ref|ZP_02920019.1| hypothetical protein STRINF_00894 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282369|gb|EDT47794.1| hypothetical protein STRINF_00894 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 271 Score = 116 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 111/257 (43%), Gaps = 29/257 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ + F + ++ G G+ I+L T+ ++ + PL Q S M+ Sbjct: 25 EVTASSTNGWEQIVYFFAKAIQWLSINGRIGVGIVLFTIIIRAIMMPLYNMQIKSGQKMQ 84 Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 N+QP++ +L+EK+ L + LYK + +NP A P+++Q+P+ A+Y+ + Sbjct: 85 NLQPELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVVQLPILMALYQAL 144 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ + WI+ L+ DP I P++ +L F+ + Sbjct: 145 TRVAFLK-TGTFLWIE-LSQPDPYY-------------------ILPVLAALFTFLSTWL 183 Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + A + ++ MP++ F +G+++YW+ SN + Q ++ + +I Sbjct: 184 TNKAAREKNFAMTLMTYVMPIIIFFFGFRLASGVVLYWTVSNAFQVFQILLLN--NPFKI 241 Query: 565 GLIDRLRSTFSKNYNSQ 581 + K + ++ Sbjct: 242 IAEREAKERAEKEHAAK 258 >gi|297622618|ref|YP_003704052.1| membrane protein insertase, YidC/Oxa1 family [Truepera radiovictrix DSM 17093] gi|297163798|gb|ADI13509.1| membrane protein insertase, YidC/Oxa1 family [Truepera radiovictrix DSM 17093] Length = 562 Score = 116 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 24/223 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 ++ + +++ Y +VG++G+AI+L T+ + L +PL Q S M+ IQPK+ EL++ Sbjct: 311 LSLGIIVVLEAIYGVVGSWGLAIILLTLLFRALVWPLISAQTKSMVGMQKIQPKMQELQK 370 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+K + L + ++LY+ +NP GC PIL+Q+P+F +++V + + W Sbjct: 371 KYKNDREK-LTQETMKLYQEAGVNPAGGCLPILVQMPIFIILWRVF---INFEFNEGFLW 426 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 I DL +DP + PI+ M Q ++ + L Sbjct: 427 IPDLGLSDPFY-------------------LLPILYVAVMVGQSVVASKGNTQMLRQQLL 467 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 VFVF + FPAG+ +Y S +I ++QQ +I + A Sbjct: 468 I-SGVFVFFIFGFPAGVTLYLITSMLIQVLQQWLIQRNMDAAP 509 >gi|209558773|ref|YP_002285245.1| Membrane protein oxaA 1 precursor [Streptococcus pyogenes NZ131] gi|209539974|gb|ACI60550.1| Membrane protein oxaA 1 precursor [Streptococcus pyogenes NZ131] Length = 269 Score = 116 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 27/212 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ EL++K+ Q Sbjct: 45 QWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTQTR 104 Query: 412 QK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 K LYK + +NP A P+L+Q+PV A+++ ++ ++ + W++ LA Sbjct: 105 MKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLK-TGTFLWVE-LAQH 162 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525 D H+ + P++ ++ F+ ++ A + +++ MP+ Sbjct: 163 D-------------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPL 203 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + F + +G+++YW+ SN +VQ ++ Sbjct: 204 MIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 235 >gi|255547956|ref|XP_002515035.1| conserved hypothetical protein [Ricinus communis] gi|223546086|gb|EEF47589.1| conserved hypothetical protein [Ricinus communis] Length = 499 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 18/232 (7%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ +G AI+L TV VK FPL KKQ S M+++QP+I +++++ + ++ Sbjct: 130 HVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQQYAGNQEKIQL-E 188 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNI 473 +LYK INP AGC P L IPV+ +Y+ +S + E + WI LA Sbjct: 189 TARLYKLAGINPFAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAA 248 Query: 474 FTLFGILPFYLPGFMHVGIW-----------PIIMSLSMFI-----QMKMSPPPADKGQA 517 + + P P+++ +S +I Q + P K Sbjct: 249 RQNGSGISWLFPFVDGHPPLGWYDTFAYLVLPVLLVVSQYISVQIMQSSQNNDPNMKSSQ 308 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 I +P++ + S P+GL +YW +N++S QQ + K+ GA+ + Sbjct: 309 AITQLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVSQE 360 >gi|331268192|ref|YP_004394684.1| membrane protein oxaA [Clostridium botulinum BKT015925] gi|329124742|gb|AEB74687.1| Membrane protein oxaA [Clostridium botulinum BKT015925] Length = 220 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 8/212 (3%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 ++G+ I++ T+ ++++ FPL KQ S M IQP++ +L+EK+K PQ Q+ M++L Sbjct: 16 SYGLTIIVLTLIIRIVLFPLNYKQIKSQVGMTEIQPELKKLQEKYKN-DPQRQQQEMMKL 74 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 YK + +NPL GC P+L+Q P+ A++ V + + P + L + Sbjct: 75 YKEYGVNPLGGCLPLLVQWPILIALFYVFNNL--SKIEPSIVNVTFLGVK----LMEPAI 128 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN-WMPVVFVFALSSFPAG 537 + P Y ++ + ++ S I + A Q +++ +M + V+ FP Sbjct: 129 LKPEYWYTWILPIVSALLTYFSTVIMTSKNADSAQVKQTKMMSGFMTLFVVYMSFKFPTA 188 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 L++YW +++ I Q + + + LI Sbjct: 189 LVLYWITNSLFQIGQTIITQRSQQKKKELIQE 220 >gi|15672111|ref|NP_266285.1| hypothetical protein L131778 [Lactococcus lactis subsp. lactis Il1403] gi|281490609|ref|YP_003352589.1| preprotein translocase subunit YidC [Lactococcus lactis subsp. lactis KF147] gi|38503175|sp|Q9CJ72|OXAA1_LACLA RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|12722977|gb|AAK04227.1|AE006251_3 hypothetical protein L131778 [Lactococcus lactis subsp. lactis Il1403] gi|281374415|gb|ABX75661.2| Preprotein translocase subunit YidC [Lactococcus lactis subsp. lactis KF147] Length = 269 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 111/243 (45%), Gaps = 34/243 (13%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP--- 408 F + G G+ I+L T+ ++ PL Q S+ M+ IQP+I +++ K+ Sbjct: 46 RFLSFGGLTGVGIILFTIVIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKDMESR 105 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +++ + + +LY + +NP GC P+++Q+PV +A+Y+ +S ++H + W + + A Sbjct: 106 RLMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKH-GTFLWFE-IGAK 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525 DPT I PI+ ++ F+ + A + + MP+ Sbjct: 164 DPTF-------------------ILPILAAVFTFLSSYLMMKSAPERNAMTTSMTYIMPI 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAV------IMKMHGAEIGL-IDRLRSTFSKNY 578 + +F AG+ +YW SN + Q + I+ A++ + D++++ Sbjct: 205 FILIMGVNFAAGIALYWVISNAFQVFQTMLLANPYKIIAAREAKVQVEKDKIKAREKALK 264 Query: 579 NSQ 581 ++ Sbjct: 265 KAR 267 >gi|315223127|ref|ZP_07864995.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus anginosus F0211] gi|315187816|gb|EFU21563.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus anginosus F0211] Length = 305 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 104/264 (39%), Gaps = 39/264 (14%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF----PLAKKQYVST 386 + W + + N+ FG+AI++ T+ V+L+ + K + Sbjct: 29 GKPAGFVWDIIGRPMSLAIQYFANNMGLGFGVAIIIVTLIVRLIILPLGLYQSWKSTYQS 88 Query: 387 ANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 M ++P + ++E+ K + Q Q+A++ K + +N L GC P+L+Q+P F Sbjct: 89 EKMNYLKPIFEPIQERMKNAETQEEKLAAQQALMTAQKENGVNMLGGIGCLPLLIQLPFF 148 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y + + + +F +P + +I+ + Sbjct: 149 SALYFSAQYTEGVAKS-------------------VFLGIPLGKASVL----LTVIVGVL 185 Query: 501 MFIQMKMSPPPADKGQA----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 FIQ ++ D+ Q ++ P++ V + PAG+ +YW I I+QQ +I Sbjct: 186 YFIQSALTLVGIDEVQKEQMKKMMYMSPLMIVIFSFTAPAGVTLYWVVGGFIMIIQQLII 245 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580 H L R+ + N Sbjct: 246 N--HYIRPQLRKRVAEEYKNNPPK 267 >gi|288574742|ref|ZP_06393099.1| 60 kDa inner membrane insertion protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570483|gb|EFC92040.1| 60 kDa inner membrane insertion protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 259 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 23/246 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + M+ L+S +N VG++G+A+++ T+ V+LL PL KQ VS M+ +QP+I Sbjct: 1 MWEAASNAMYGLLSTIHNFVGSWGLAVIVLTLLVRLLLHPLNHKQLVSMQKMQKLQPRIK 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L+EK+K L + + LYK + +NP AGC P+L+Q+P+ +++V+ S + A Sbjct: 61 MLQEKYKDDKE-GLSRETMALYKENKVNPAAGCLPLLVQLPILILLFRVLMNS-DFGGAS 118 Query: 458 FWGWIKDLA------------AADPTNIFT-----LFGILPFYLPGFMHVGIWPIIMSL- 499 F G + + AA+ TNI P L F G +++ L Sbjct: 119 FLGITLEGSVLTTMAEALGVVAAEGTNIGFMTVVKAIMANPSGLASFGLYGPNLLLLGLI 178 Query: 500 --SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + Q +MS + AM+ +MPV F S P G+++YW S+ I + QQ ++ Sbjct: 179 IFVTWYQQRMS-STGNPQMAMMNWFMPVFMGFICLSLPGGVMLYWGASSFIGVGQQWWVL 237 Query: 558 KMHGAE 563 E Sbjct: 238 HKTSQE 243 >gi|322390329|ref|ZP_08063857.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis ATCC 903] gi|321142977|gb|EFX38427.1| ParB/SpoJ family partitioning protein [Streptococcus parasanguinis ATCC 903] Length = 279 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 34/236 (14%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---P 408 F + G+ G+ I++ T+ ++ + PL + Q ST M+ IQP + EL+ K+ Sbjct: 54 RFLSFGGSIGVGIIVFTIVIRTVLLPLFQYQMNSTRKMQEIQPLLKELQAKYPGKDLDSR 113 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + M LYK + + P+L+Q+PV A+++ +S +E + W+ DL A Sbjct: 114 TKLSEEMRALYKEKGVKTSSAFLPLLIQMPVLMALFQALSR-VEFLKVGHFLWL-DLGAI 171 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525 DPT I P++ +L F ++ + ++ MPV Sbjct: 172 DPTY-------------------ILPVLAALFTFFSSWLTNKALPERNGSATTMMYVMPV 212 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + F +G+ +YW SN + Q ++ + +K S+ Sbjct: 213 MIFFFALFSASGVALYWVTSNAYQVGQTYLLN-------NPFKIIAEREAKEQASR 261 >gi|256548863|gb|ACU82913.1| 60 kD inner-membrane protein [Buchnera aphidicola (Acyrthosiphon pisum)] Length = 310 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 128/319 (40%), Gaps = 22/319 (6%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 + +KN + +N+ G ++ +L Y + S+ P L + + Y A+ + Sbjct: 1 IFIKNDVISLVVNMYGGDVEEASLLAYKDTLYSSRPFKLL--ETGSDFIYQAQSGLIGKD 58 Query: 131 N-NIELPNSNTVWNLISGKILTPTTPIKLV----FKNANNILFERTISLDEH-YLFKIVD 184 + + +S +++ + +L + + N +++++T L + Y +I Sbjct: 59 GPDSSINDSRPLYSANKNFFVLGPNEKELRVPIKWLSKNGVIYKKTFILKPNRYDVQIEY 118 Query: 185 TVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 V N S + + + G+I + + G D + K+ I Sbjct: 119 DVYNASKESLNMNIFGQIKQTINLPKKRNVYSGNFALQTFRGAAYSSDDNKYEKYKFDMI 178 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + W+ + +Y+A +IP L H + + I I Sbjct: 179 ANNKNLHIITESGWIAMLQQYFAVAWIPDNLGKNTIYTSSLD--HDTAVIGYKSPIINIP 236 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 P + L+ G + + P ++ +D+GW +F+++P+F L++ Y+++ Sbjct: 237 PNSRSIIKSKLWIGPEIQKEMKLVA-----PNLDLTVDYGWLWFLSQPLFKLLTILYSII 291 Query: 358 GNFGIAIMLTTVFVKLLFF 376 GN+G +I+L T ++ L + Sbjct: 292 GNWGFSIILITFIMRGLTY 310 >gi|55820342|ref|YP_138784.1| OxaA-like protein [Streptococcus thermophilus LMG 18311] gi|116627178|ref|YP_819797.1| OxaA-like protein precursor [Streptococcus thermophilus LMD-9] gi|55736327|gb|AAV59969.1| cytochrome oxidase biogenesis (Oxa1) family protein, similar to SpoIIIJ [Streptococcus thermophilus LMG 18311] gi|116100455|gb|ABJ65601.1| Preprotein translocase subunit YidC [Streptococcus thermophilus LMD-9] gi|312277657|gb|ADQ62314.1| Preprotein translocase subunit YidC [Streptococcus thermophilus ND03] Length = 305 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 103/255 (40%), Gaps = 31/255 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM----KN 391 W W ++ + NL FG+ I+ T+ V+ + PL Q S A + Sbjct: 36 WVWNLLGRPMSHVITYFANNLGLGFGLGIIFVTIIVRSIILPLGLHQSRSAAYQSAKREY 95 Query: 392 IQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 + P ++ + E+ + + Q + ++Q + + ++ + GC P+L+Q P F A+Y Sbjct: 96 LAPILEPINERLRNAKTQEEKMAAQSELMQAQRENGLSLMGGIGCLPLLIQFPFFSALYY 155 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + W +L D F + I + ++ + Sbjct: 156 AARYTPGVL-KDDFLWF-NLGHRD-----------------FPLIIIIAALYYFQSWLSI 196 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + P K A + MP++ +F S PA +I+YW + SI+QQ + + + Sbjct: 197 QQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWLVGGIFSIIQQLITN--YIIKPR 254 Query: 566 LIDRLRSTFSKNYNS 580 L +++ F KN Sbjct: 255 LKEKVAEEFKKNPPK 269 >gi|225871157|ref|YP_002747104.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. equi 4047] gi|225700561|emb|CAW95058.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. equi 4047] Length = 306 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 97/286 (33%), Gaps = 31/286 (10%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 TN + + + W Y F++ + + +G+AI Sbjct: 5 TNRILFSGLALSVLLTLTGCVGRDAKGHPEGIIWDYLGKPVSFLIDYFANSTALGYGLAI 64 Query: 365 MLTTVFVKLLF--------FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 ++ T+ V+ + + + + +P ++ Q ++ Sbjct: 65 IVVTIIVRTIILPLGLYQSWKASYQSEKMAYLKPFFEPINQRIKNATSTEEKMAAQTELM 124 Query: 417 QLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 + + +NPL GC P+L+Q+P F A+Y + + + Sbjct: 125 AAQRENGVNPLGGIGCLPLLIQMPFFSAMYVAVQFT---KGVST---------------- 165 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + F + + + + + ++ M P + +L MP++ + Sbjct: 166 STFMGIDLGHRSVLLTAVIAALYFVQSWLSMMAVPEEQREQMKAMLYTMPIMMIVMSFYL 225 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 PAGL +YW SI+QQ + + + L ++ F+KN Sbjct: 226 PAGLGLYWLVGGFFSIIQQLITT--YLLKPRLRKQIAEEFAKNPPK 269 >gi|227494185|ref|ZP_03924501.1| inner membrane insertion protein [Actinomyces coleocanis DSM 15436] gi|226831919|gb|EEH64302.1| inner membrane insertion protein [Actinomyces coleocanis DSM 15436] Length = 433 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 115/252 (45%), Gaps = 25/252 (9%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 M +++ + ++I+ T+ V+ L PL +Q + M+ +QP Sbjct: 13 FVAVIMVGIHKMLVMLGMNDGPGFAWVLSIIGLTMIVRTLLIPLFFRQIKAARGMQLVQP 72 Query: 395 KIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++ +L+EK+K Q ++ M+ LY+ H +P A C PIL+Q+P+FFA+++V++ + Sbjct: 73 ELKKLQEKYKDRKDQASKQKMSEEMMALYREHGTSPFASCMPILMQMPIFFALFRVLAST 132 Query: 451 LEMRHA----PFWGWIKDLAAAD--PTNIFTLFGILPF---YLPGFMHVGIWPIIMSLSM 501 + G + + A D +N+F F F + + + ++M S Sbjct: 133 ATLAEGKYPGGSIGPLNEKLAQDIEDSNLFGAFLSDTFVTASGSARVVLVVLILLMMGSQ 192 Query: 502 FIQMK----MSPP-----PADKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 F M+ + P P + Q +++ MP++ + F G+++YW +N+ + Sbjct: 193 FFTMRQLTMKNMPESAKDPNNPMMRSQIIMMYLMPLMIGASGFYFQTGVLVYWFTTNMWT 252 Query: 550 IVQQAVIMKMHG 561 + QQ ++ Sbjct: 253 MGQQFWTIERMP 264 >gi|300215289|gb|ADJ79705.1| 60 kDa inner membrane protein [Lactobacillus salivarius CECT 5713] Length = 279 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 30/228 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + ++ GN +G I++ T+ V+++ PL Q S +QPK+ Sbjct: 38 WDHYIVWNFIRAIQGLSHIFGNSYGWGIVIFTIIVRIIILPLMIYQMKSMRQTMELQPKL 97 Query: 397 DELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L+ K+ Q+L K +LY INP A P+++Q+P+ FA+Y+ I S + Sbjct: 98 KALQGKYPGKDMESRQMLAKEQQKLYSEAGINPFASMLPLIVQMPILFALYQAIFRSDVL 157 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + + + W++ L DP I PI+ ++ ++ K++ A Sbjct: 158 K-SGTFFWMQ-LGDKDPYY-------------------ILPILAAIFTWLTSKLN-SMAQ 195 Query: 514 KGQAMI---LNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q I + W MP++ + PA L +YW +N+ S Q +I Sbjct: 196 PEQNTITTVMTWSMPIMIFVFALNVPAALSLYWVITNLFSAGQTLLIN 243 >gi|217966559|ref|YP_002352065.1| hypothetical protein [Dictyoglomus turgidum DSM 6724] gi|217335658|gb|ACK41451.1| 60 kDa inner membrane insertion protein [Dictyoglomus turgidum DSM 6724] Length = 209 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 65/229 (28%), Positives = 114/229 (49%), Gaps = 29/229 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +A + ++ FY L GN+G+AI+ + V+++ +PL Q S + IQP+I Sbjct: 1 MINALANGLGYILELFYKLTGNYGLAIIFLVILVRIILYPLTHAQLKSLFMQQKIQPEIK 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +++EKFK PQ + K ++ LY+ + INP+ GC P+L+Q P+ A+Y+++ + P Sbjct: 61 KIQEKFKD-DPQEMNKQIMLLYQQYKINPMMGCLPLLIQFPILIALYQLLLH-YKYAVTP 118 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ---MKMSPPPADK 514 + WI DL D I IIM++ + +S P K Sbjct: 119 QFLWISDLTKPD---------------------YILLIIMAIVTYFSGELSSLSAAPEQK 157 Query: 515 GQAMILNWMP-VVFVFAL--SSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 Q I+N ++F PAG+++YW S++ ++QQ V+ ++H Sbjct: 158 NQQRIMNIFTTLLFTGMFLLYKVPAGVMLYWLVSSLFQLLQQVVVFRLH 206 >gi|269977737|ref|ZP_06184697.1| membrane protein OxaA [Mobiluncus mulieris 28-1] gi|306817498|ref|ZP_07451242.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|307699977|ref|ZP_07637028.1| membrane protein insertase, YidC/Oxa1 family [Mobiluncus mulieris FB024-16] gi|269934041|gb|EEZ90615.1| membrane protein OxaA [Mobiluncus mulieris 28-1] gi|304649722|gb|EFM47003.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|307615015|gb|EFN94233.1| membrane protein insertase, YidC/Oxa1 family [Mobiluncus mulieris FB024-16] Length = 445 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 28/233 (12%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKA 414 + ++I+ TVFV+LL PL KQ +T M QP++ +++K+K Q +Q+ Sbjct: 51 GWVLSIVGLTVFVRLLLVPLFVKQIKATRAMSLAQPEMSAIQKKYKGKRDQQSMIRMQEE 110 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-----EMRHAPFWGWIKDLAAAD 469 + + + + A C PIL Q+PVFFA+Y+++ + G + + A D Sbjct: 111 TRAVQRKYGASMSASCLPILFQMPVFFALYRLLYNMKPIADGVLPGHDSIGGMGQVQAQD 170 Query: 470 ---PTNIFTLFGILPFYLPGFMHVGIWPIIMSL----SMFIQMK-MSPPPADKGQ----- 516 T G+ F M I +M SM Q ++ + Q Sbjct: 171 LWHSTFFGQSLGLTMFGPGSIMSTKIVVGLMVAYLVLSMLFQTAFLTMKNMSQEQLNSDN 230 Query: 517 ------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ MP++++F GL++YW SN I+QQ IM+ Sbjct: 231 PMVKSTKSMMYLMPLMYLFTGPVVQVGLLVYWVTSNTWMILQQFFIMRAFPTR 283 >gi|28493772|ref|NP_787933.1| inner membrane protein translocase component YidC [Tropheryma whipplei str. Twist] gi|28476814|gb|AAO44902.1| stage III sporulation protein J-like protein [Tropheryma whipplei str. Twist] Length = 333 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 34/264 (12%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + + ++ ++I+ + ++ P+ KQ + M I P++ ++ Sbjct: 48 VFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLIPVFLKQIRAQRKMLEIAPEVRRIQ 107 Query: 401 EKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS------ 450 EK+K Q + + M+++Y+ NPL+ C PI+LQ+PVFF +Y+VI + Sbjct: 108 EKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLPIVLQMPVFFGLYQVIESAQNAGTG 167 Query: 451 ---------LEMRHAPFWG--WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 ++ R + +G + D + D L F L + G+ IM Sbjct: 168 VGPLNGPLGMDFRDSRIFGVVPLHDSFSHDFY---ALQAGQAFNLITMIVAGVLTAIMIA 224 Query: 500 SMFIQM-KMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 K+ P K Q ++L +P++F+ SFP G++IYW+ SNV S Sbjct: 225 VQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFLGMGFSFPVGILIYWTASNVWS 284 Query: 550 IVQQAVIMKMHGAEIGLIDRLRST 573 VQQAV + + + L LR Sbjct: 285 AVQQAVAIYRNPSPGSLAFELRRK 308 >gi|300174207|ref|YP_003773373.1| membrane protein OxaA [Leuconostoc gasicomitatum LMG 18811] gi|299888586|emb|CBL92554.1| Membrane protein oxaA 1 precursor [Leuconostoc gasicomitatum LMG 18811] Length = 279 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 100/261 (38%), Gaps = 35/261 (13%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 W +A ++ N+G+ I++ T+ ++ L PL Q S M+ + Sbjct: 38 ASHSLWSAVVAAFTSAILGASAWFGNNYGMGIIVFTILIRFLILPLMVYQIQSMMKMQIV 97 Query: 393 QPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 QP + L+ K+ Q++ LYK +NP A P+++Q+PV A+Y+ I Sbjct: 98 QPALKALQSKYPGKDTESRQLMMAEQQALYKDAGVNPFASMLPLIVQMPVLIALYQSIYN 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S +R + + W++ L DP I PI+ +L F +S Sbjct: 158 SQVLR-SGKFLWLQ-LGNNDPYY-------------------ILPILAALFTFASSWLST 196 Query: 510 PPADKGQAMILNWMPVVF-VFALSS---FPAGLIIYWSWSNVISIVQQAV------IMKM 559 Q + MP +F V S P+ L +YW N+ +Q I + Sbjct: 197 QAT-PEQNGMTKAMPYIFPVVIFFSAIAVPSALSLYWVVGNLFQTIQTFFLQNPFKIRRQ 255 Query: 560 HGAEIGLIDRLRSTFSKNYNS 580 E+ ++ K S Sbjct: 256 RELELQKERDMKRKIKKAKRS 276 >gi|30684018|ref|NP_850125.1| ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] gi|330253079|gb|AEC08173.1| inner membrane protein ALBINO3 [Arabidopsis thaliana] Length = 348 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 18/208 (8%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ +G AI+L T+ VK +PL K+Q ST M+N+QPKI +++++ + + +Q Sbjct: 135 HVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLE 193 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470 +LYK +NPLAGC P L IPV+ +Y+ +S + E + WI L Sbjct: 194 TSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIAA 253 Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518 + I LF G P + + P+++ S ++ M++ PP D Q Sbjct: 254 RQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTL 313 Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSWS 545 + ++P++ + S P+GL IYW S Sbjct: 314 LVFKFLPLMIGYFALSVPSGLSIYWLVS 341 >gi|225867929|ref|YP_002743877.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. zooepidemicus] gi|225701205|emb|CAW98134.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. zooepidemicus] Length = 306 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 96/286 (33%), Gaps = 31/286 (10%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 TN + + + W Y F++ + + +G+AI Sbjct: 5 TNRILFSGLALSVLLTLTGCVGRDAKGHPEGIIWDYLGKPVSFLIDYFANSTALGYGLAI 64 Query: 365 MLTTVFVKLLF--------FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 ++ T+ V+ + + + + +P ++ Q ++ Sbjct: 65 IVVTIIVRTIILPLGLYQSWKASYQSEKMAYLKPFFEPINQRIKNATSTEEKMAAQTELM 124 Query: 417 QLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 + + +NPL GC P+L+Q+P F A+Y + + Sbjct: 125 AAQRENGVNPLGGIGCLPLLIQMPFFSAMYVAVQFT-------------------KGVST 165 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + F + + + + + ++ M P + +L MP++ + Sbjct: 166 STFMGIDLGHRSVLLTAVIAALYFVQSWLSMMAVPEEQREQMKAMLYTMPIMMIVMSFYL 225 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 PAGL +YW SI+QQ + + + L ++ F+KN Sbjct: 226 PAGLGLYWLVGGFFSIIQQLITT--YLLKPRLRKQIAEEFAKNPPK 269 >gi|110802031|ref|YP_699906.1| putative inner membrane protein translocase component YidC [Clostridium perfringens SM101] gi|110682532|gb|ABG85902.1| membrane protein OxaA [Clostridium perfringens SM101] Length = 238 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 12/219 (5%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F A F+ + + + I I L T+ V+L+ PL KQ S M+ IQP+I Sbjct: 13 TMIFQAIHGFVASLDIFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIA 72 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L++K+K +P + Q+ M++LYK +N+NP++GC P+L+Q+P+ FA+Y V E++ Sbjct: 73 KLQKKYKNNPEKA-QQEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFYGLGELKGVS 131 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W+ DL A D T I + YL + + F Q + P Sbjct: 132 -FLWLGDLWAPDRTFILPILSAATTYLSSLLM----------TKFTQSQTGGAPGGMNMN 180 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + M + FP+ L++YW N+I +VQ I Sbjct: 181 TMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQTYFI 219 >gi|55822232|ref|YP_140673.1| OxaA-like protein precursor [Streptococcus thermophilus CNRZ1066] gi|55738217|gb|AAV61858.1| hypothetical protein, SpoIIIJ family protein [Streptococcus thermophilus CNRZ1066] Length = 305 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 103/255 (40%), Gaps = 31/255 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM----KN 391 W W ++ + NL FG+ I+ T+ V+ + PL Q S A + Sbjct: 36 WVWNLLGRPMSHVITYFANNLGLGFGLGIIFVTIIVRSIILPLGLHQSRSAAYQSAKREY 95 Query: 392 IQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 + P ++ + E+ + + Q + ++Q + + ++ + GC P+L+Q P F A+Y Sbjct: 96 LAPILEPINERLRNAKTQEEKMAAQSELMQAQRENGLSLMGGIGCLPLLIQFPFFSALYY 155 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + W +L D F + I + ++ + Sbjct: 156 AARYTPGVL-KDDFLWF-NLGHRD-----------------FPLIIIIAALYYFQSWLSI 196 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + P K A + MP++ +F S PA +I+YW + SI+QQ + + + Sbjct: 197 QQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWLVGGIFSIIQQLITN--YIIKPR 254 Query: 566 LIDRLRSTFSKNYNS 580 L +++ F KN Sbjct: 255 LKEKVAEEFKKNPPK 269 >gi|125623022|ref|YP_001031505.1| preprotein translocase subunit [Lactococcus lactis subsp. cremoris MG1363] gi|124491830|emb|CAL96750.1| preprotein translocase subunit [Lactococcus lactis subsp. cremoris MG1363] gi|300069769|gb|ADJ59169.1| preprotein translocase subunit [Lactococcus lactis subsp. cremoris NZ9000] Length = 269 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 111/243 (45%), Gaps = 34/243 (13%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP--- 408 F + G G+ I+L T+ ++ PL Q S+ M+ IQP+I +++ K+ Sbjct: 46 RFLSFGGLTGVGIILFTIIIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKDMESR 105 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +++ + + +LY + +NP GC P+++Q+PV +A+Y+ +S ++H + W + + A Sbjct: 106 RLMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKH-GTFLWFE-IGAK 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525 DPT I PI+ ++ F+ + A + + MP+ Sbjct: 164 DPTF-------------------ILPILAAIFTFLSSYLMMKSAPERNAMTTSMTYIMPI 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAV------IMKMHGAEIGL-IDRLRSTFSKNY 578 + +F +G+ +YW SN + Q + I+ A++ + D++++ Sbjct: 205 FILIMGVNFASGIALYWVISNAFQVFQTMLLANPYKIIAAREAKVQVEKDKVKAREKALK 264 Query: 579 NSQ 581 ++ Sbjct: 265 KAR 267 >gi|297592153|gb|ADI46937.1| ALB3_1m [Volvox carteri f. nagariensis] Length = 455 Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 24/235 (10%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ +G +I+L T+ VK+L +PL K+Q S ++ ++P++D ++++F + ++K Sbjct: 132 HVPYAYGYSIILLTLVVKILTYPLVKQQVESALAVQALKPRVDLIKDRFGDDTEK-IRKE 190 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRHAPFWGWIKDLAAADPTN 472 LY+ +NPLAGC P L IPVF +Y ++ + + WI LA Sbjct: 191 TSVLYEQAGVNPLAGCLPTLATIPVFIGLYTSLTNVANGGLLDTQGFYWIPSLAGPTTLA 250 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLS-MFI------------QMKMSPPPADK----- 514 + P PI + ++ ++ PP D Sbjct: 251 QRQSGLGTSWLFPFVDGAP--PIGWGAAATYLVLPVLLVLVQYVSSYLTNPPIDPNDENA 308 Query: 515 -GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 Q ++L +P++ + + P+GL +Y+ + V+S QQ + K+ GA + + + Sbjct: 309 SMQRILLLGLPLMIGWFALNVPSGLSLYYLSNTVLSAAQQVYLKKLGGARVSINE 363 >gi|116510957|ref|YP_808173.1| preprotein translocase subunit YidC [Lactococcus lactis subsp. cremoris SK11] gi|116106611|gb|ABJ71751.1| Preprotein translocase subunit YidC [Lactococcus lactis subsp. cremoris SK11] Length = 269 Score = 115 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 111/243 (45%), Gaps = 34/243 (13%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP--- 408 F + G G+ I+L T+ ++ PL Q S+ M+ IQP+I +++ K+ Sbjct: 46 RFLSFGGLTGVGIILFTIIIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKDMESR 105 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +++ + + +LY + +NP GC P+++Q+PV +A+Y+ +S ++H + W + + A Sbjct: 106 RLMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKH-GTFLWFE-IGAK 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525 DPT I PI+ ++ F+ + A + + MP+ Sbjct: 164 DPTF-------------------ILPILAAIFTFLSSYLMMKSAPERNAMTTSMTYIMPI 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAV------IMKMHGAEIGL-IDRLRSTFSKNY 578 + +F +G+ +YW SN + Q + I+ A++ + D++++ Sbjct: 205 FILIMGVNFASGIALYWVISNAFQVFQTMLLANPYKIIAAREAKVQVEKDKVKAREKALK 264 Query: 579 NSQ 581 ++ Sbjct: 265 KAR 267 >gi|239622135|ref|ZP_04665166.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515326|gb|EEQ55193.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 338 Score = 115 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 22/217 (10%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAM 415 +GIAIM + +++ PL Q + ++ +QP+I ++ K+ + +Q+ + Sbjct: 42 WGIAIMCLVLVIRICLLPLFLSQMRAMQRIQVLQPQIQRIQHKYAARKDPRSKEAMQREI 101 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRHAPFWGWIKDLAAAD--PT 471 + L + +N NPL C P L+Q P+ +++ + ++ +A G I A D + Sbjct: 102 MALQQRYNANPLGSCLPSLIQAPILCSLFYTLQSLPAIADGNAEPLGGIDHTMAGDIESS 161 Query: 472 NIFTLFGILPF----YLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKG-------QA 517 +IF + F + +G+ +M L++F M D Q Sbjct: 162 SIFGVRIADSFGTVASPQSRIIIGVAVALMCLTLFAIQWMLIHRNTSKDAMVSPQFRVQK 221 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 M + P ++V + ++ P G+++YW +N+ ++ Q Sbjct: 222 MTVFVFPAIYVVSGATLPFGVLLYWLTNNLWNLGQTL 258 >gi|300811989|ref|ZP_07092445.1| putative stage III sporulation protein J [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313124785|ref|YP_004035044.1| preprotein translocase subunit yidc [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300497015|gb|EFK32081.1| putative stage III sporulation protein J [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312281348|gb|ADQ62067.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 289 Score = 115 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 29/238 (12%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +W + + ++ G++G AI++ TV ++++ PL Q ST Sbjct: 40 PISHNSSNWWDAWVVYYLSQFVLWIAKVCGGSYGWAIIIFTVIIRVILLPLNAVQINSTR 99 Query: 388 NMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 M+ IQP++ L+EK+ L + +LYK +NP AGC P+++Q+PV +A+Y Sbjct: 100 KMQEIQPELKALQEKYSSKDLETRNKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWALY 159 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + I + EM + W+ DL DP I PI+ ++ F+ Sbjct: 160 QAIWRTPEM-QNGKFLWM-DLGKPDPYY-------------------ILPILATVFTFLS 198 Query: 505 MKMS----PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ P + ++ M ++ F + + +YW SN+ + Q V+ Sbjct: 199 SYIATLSVPKSSQTTMTKMMSYVMAIMVGIWAIVFQSAISLYWVISNLFQVGQTLVLQ 256 >gi|251781821|ref|YP_002996123.1| OxaA-like protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390450|dbj|BAH80909.1| OxaA-like protein precursor [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 307 Score = 115 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 101/289 (34%), Gaps = 39/289 (13%) Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 N + + + W + + + + N +G+AI+ Sbjct: 6 NRILFSGLALSILFTLTGCVGRDAHGNPKGMIWEFLGKPMSYFIDYFANNAGLGYGLAII 65 Query: 366 LTTVFVKLLF--------FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 + T+ V+ L + + + +P +++ Q Q ++ Sbjct: 66 IVTIVVRTLILPLGLYQSWKASYQSEKMAFLKPVFEPINKRIKQASSQEEKMAAQTELMA 125 Query: 418 LYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + H INPL GC P+L+Q+P F A+Y + + + F G DL + Sbjct: 126 AQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR------- 176 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFAL 531 + I++ F Q +S + Q ++ MP++ + Sbjct: 177 --------------SLVLTAIIAALYFFQSWLSMMAVSEEQREQMKAMMYTMPIMMIVMS 222 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 S PAG+ +YW SI+QQ + + + L ++ ++KN Sbjct: 223 FSLPAGVGLYWLVGGFFSIIQQLITT--YILKPRLHKQIEEEYAKNPPK 269 >gi|104774817|ref|YP_619797.1| hypothetical protein Ldb2216 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514946|ref|YP_813852.1| preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423898|emb|CAI98940.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116094261|gb|ABJ59414.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 289 Score = 115 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 29/233 (12%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +W + + ++ G++G AI++ TV ++++ PL Q ST M+ I Sbjct: 45 SSNWWDAWVVYYLSQFVLWIAKVCGGSYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEI 104 Query: 393 QPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 QP++ L+EK+ L + +LYK +NP AGC P+++Q+PV +A+Y+ I Sbjct: 105 QPELKALQEKYSSKDLETRNKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAIWR 164 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS- 508 + EM + W+ DL DP I PI+ ++ F+ ++ Sbjct: 165 TPEM-QNGKFLWM-DLGKPDPYY-------------------ILPILATVFTFLSSYIAT 203 Query: 509 ---PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P + ++ M ++ F + + +YW SN+ + Q V+ Sbjct: 204 LSVPKSSQTTMTKMMSYVMAIMVGIWAIVFQSAISLYWVISNLFQVGQTLVLQ 256 >gi|326405712|gb|ADZ62783.1| preprotein translocase subunit YidC [Lactococcus lactis subsp. lactis CV56] Length = 269 Score = 115 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 111/243 (45%), Gaps = 34/243 (13%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP--- 408 F + G G+ I+L T+ ++ PL Q S+ M+ IQP+I +++ K+ Sbjct: 46 RFLSFGGLTGVGIILFTIVIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKNMESR 105 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 +++ + + +LY + +NP GC P+++Q+PV +A+Y+ +S ++H + W + + A Sbjct: 106 RLMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKH-GTFLWFE-IGAK 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525 DPT I PI+ ++ F+ + A + + MP+ Sbjct: 164 DPTF-------------------ILPILAAVFTFLSSYLMMKSAPERNAMTTSMTYIMPI 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAV------IMKMHGAEIGL-IDRLRSTFSKNY 578 + +F AG+ +YW SN + Q + I+ A++ + D++++ Sbjct: 205 FILIMGVNFAAGIALYWVISNAFQVFQTMLLANPYKIIAAREAKVQVEKDKIKAREKALK 264 Query: 579 NSQ 581 ++ Sbjct: 265 KAR 267 >gi|182626422|ref|ZP_02954175.1| membrane protein OxaA [Clostridium perfringens D str. JGS1721] gi|177908296|gb|EDT70849.1| membrane protein OxaA [Clostridium perfringens D str. JGS1721] Length = 238 Score = 115 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 12/219 (5%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F A F+ + + + I I L T+ V+L+ PL KQ S M+ IQP+I Sbjct: 13 TMIFQAIHGFVASLDIFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIA 72 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L++K+K +P + Q+ M++LYK +N+NP++GC P+L+Q+P+ FA+Y V E++ Sbjct: 73 KLQKKYKNNPEKA-QQEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFYGLGELKGVS 131 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W+ DL A D T I + YL + + F Q + P Sbjct: 132 -FLWLGDLWAPDRTFILPILSAATTYLSSLLM----------TKFTQSQAGGAPGGMNMN 180 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + M + FP+ L++YW N+I +VQ I Sbjct: 181 TMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQTYFI 219 >gi|195978754|ref|YP_002123998.1| OxaA-like protein precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975459|gb|ACG62985.1| membrane protein OxaA 2 precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 306 Score = 115 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 97/285 (34%), Gaps = 31/285 (10%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 TN + + + W Y F++ + + +G+AI Sbjct: 5 TNRILFSGLALSVLLTLTGCVGRDAKGHPEGIIWDYLGKPVSFLIDYFANSTALGYGLAI 64 Query: 365 MLTTVFVKLLF--------FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 ++ T+ V+ + + + + +P ++ Q ++ Sbjct: 65 IVVTIIVRTIILPLGLYQSWKASYQSEKMAYLKPFFEPINQRIKNATSTEEKMAAQTELM 124 Query: 417 QLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 + + +NPL GC P+L+Q+P F A+Y + + + Sbjct: 125 AAQRENGVNPLGGIGCLPLLIQMPFFSAMYVAVQFT---KGVST---------------- 165 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 + F + + + + + ++ M P + +L MP++ + Sbjct: 166 STFMGIDLGHRSVLLTAVIAALYFVQSWLSMMAVPEEQREQMKAMLYTMPIMMIVMSFYL 225 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 PAGL +YW SI+QQ + + + L ++ F+KN Sbjct: 226 PAGLGLYWLVGGFFSIIQQLITT--YLLKPRLRKQIAEEFAKNPP 268 >gi|227432921|ref|ZP_03914864.1| stage III sporulation protein J precursor [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351322|gb|EEJ41605.1| stage III sporulation protein J precursor [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 278 Score = 115 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 100/246 (40%), Gaps = 31/246 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +A ++ N+G+ I+L T+F++ L PL Q S M+ +QP + Sbjct: 43 WSAIVAVFTRAILGASSWFGNNYGMGIILFTIFIRFLILPLMVYQVQSMMKMQVVQPALK 102 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 EL+ K+ Q++ LYK +NP A P+++Q+P+ A+Y+ I S +R Sbjct: 103 ELQAKYPGKDTESRQLMMAEQQALYKDAGVNPFASMLPLIVQMPILIALYQSIWNSPVLR 162 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + + W++ L + DP I P++ +L F +S + Sbjct: 163 -SGKFLWLQ-LGSNDPYF-------------------ILPVLAALFTFASSWLSMQS-NP 200 Query: 515 GQAMILNWMPVVFVFALSS----FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 Q + MP +F + P+ L +YW N VQ + + +I Sbjct: 201 DQNGMTKAMPYIFPVIIFFSAVAVPSALSLYWVVGNAFQTVQTFFLQ--NPFKIRREREA 258 Query: 571 RSTFSK 576 + K Sbjct: 259 AAQLEK 264 >gi|332687274|ref|YP_004457048.1| inner membrane protein translocase component YidC [Melissococcus plutonius ATCC 35311] gi|332371283|dbj|BAK22239.1| inner membrane protein translocase component YidC, short form OxaI-like [Melissococcus plutonius ATCC 35311] Length = 275 Score = 115 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 27/227 (11%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 F +L N GI I+ T+ ++++ PL Q S M++IQP++ +L++K+ P+ Sbjct: 49 QFLSLNRNIGIGIVFFTIVIRVILLPLMYFQTKSMRKMQDIQPQLKKLQQKYSSKDPETQ 108 Query: 412 Q---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + +LY +N+NP AGC P+L+Q+P+ A+Y+ IS E++ + W+ L Sbjct: 109 RLFRDEQQRLYTENNVNPYAGCLPLLVQMPILMALYQAISRIPELKQ-GNFMWLA-LNKP 166 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNW-MPV 525 DP I PI+ ++ F +S I+N+ MPV Sbjct: 167 DPY-------------------LILPILAAVFTFASTYLSNMSQLESNISLKIMNFFMPV 207 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + +GL +YW+ SN Q V+ + + Sbjct: 208 MIFLMGIQLASGLSLYWTVSNAFQAGQTLVLNNPFKIRREREEEAKK 254 >gi|116619134|ref|YP_819505.1| preprotein translocase subunit YidC [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097981|gb|ABJ63132.1| Preprotein translocase subunit YidC [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 278 Score = 115 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 100/246 (40%), Gaps = 31/246 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W +A ++ N+G+ I+L T+F++ L PL Q S M+ +QP + Sbjct: 43 WSAIVAVFTRAILGASSWFGNNYGMGIILFTIFIRFLILPLMVYQVQSMMKMQVVQPALK 102 Query: 398 ELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 EL+ K+ Q++ LYK +NP A P+++Q+P+ A+Y+ I S +R Sbjct: 103 ELQAKYPGKDTESRQLMMAEQQALYKDAGVNPFASMLPLIVQMPILIALYQSIWNSPVLR 162 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + + W++ L + DP I P++ +L F +S + Sbjct: 163 -SGKFLWLQ-LGSNDPYF-------------------ILPVLAALFTFASSWLSMQS-NP 200 Query: 515 GQAMILNWMPVVFVFALSS----FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 Q + MP +F + P+ L +YW N VQ + + +I Sbjct: 201 DQNGMTKAMPYIFPVIIFFSALAVPSALSLYWVVGNAFQTVQTFFLQ--NPFKIRREREA 258 Query: 571 RSTFSK 576 + K Sbjct: 259 AAQLEK 264 >gi|293191008|ref|ZP_06609052.1| membrane protein OxaA [Actinomyces odontolyticus F0309] gi|292820695|gb|EFF79661.1| membrane protein OxaA [Actinomyces odontolyticus F0309] Length = 446 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 31/263 (11%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F I + W + + +L+ + ++I+L T+ V++ PL KQ S+ M Sbjct: 9 FAWAISYVWVWI--HDLLVLLGMSSGSGMAWVLSIVLLTILVRIAIIPLFLKQIRSSRAM 66 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYK 445 + IQP++ +++EK+K QV ++ M++ L + H ++P A C P+L+Q+PV F +Y+ Sbjct: 67 QAIQPEMRKIQEKYKGKKDQVSRQKMMEETQALQRKHKVSPFASCLPMLVQMPVLFGMYR 126 Query: 446 VIS--ISLEMRHAPFWGWIKD----LAAADPTNIFTLFGIL---------PFYLPGFMHV 490 I S+ + G D L + T I + + P + V Sbjct: 127 AIIAVSSISNGTYTYRGEATDHLGPLTESVSTEIVNSTVLGVPLSHTLRESWGQPTIVAV 186 Query: 491 GIWPI-IMSLSMFIQMKM----SPP-----PADKGQAMILNWMPVVFVFALSSFPAGLII 540 I I +M + F+ M++ + P P + Q ++ MP++F+F+ + F G+++ Sbjct: 187 FIAAIVLMVVLQFVSMRLSFSRNMPDMGDNPMAQSQRSMMYVMPLMFIFSGAFFQMGVVV 246 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 Y ++ ++ Q +K+ Sbjct: 247 YTVTASFWALAQSLWTIKVMPTP 269 >gi|332143490|ref|YP_004429228.1| putative inner membrane protein translocase component YidC [Alteromonas macleodii str. 'Deep ecotype'] gi|327553512|gb|AEB00231.1| putative inner membrane protein translocase component YidC [Alteromonas macleodii str. 'Deep ecotype'] Length = 103 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 20/117 (17%) Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+E+RHA F WI DL+ DP + PI+ SM++ K+ Sbjct: 1 MESVELRHADFVLWITDLSTKDPYF-------------------VLPILTGASMYLLQKL 41 Query: 508 SPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P D Q I+ WMPV FPAGL++YW SNVI++VQ +I Sbjct: 42 QPTTITDPMQQKIMQWMPVAMSVFFLWFPAGLVLYWLVSNVITLVQAKMIYASMEKR 98 >gi|254556467|ref|YP_003062884.1| integral membrane protein [Lactobacillus plantarum JDM1] gi|300767190|ref|ZP_07077102.1| membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180409|ref|YP_003924537.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|254045394|gb|ACT62187.1| integral membrane protein [Lactobacillus plantarum JDM1] gi|300495009|gb|EFK30165.1| membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045900|gb|ADN98443.1| integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 307 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 41/255 (16%) Query: 339 FYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ++AKP +M + N+G AI+ TV V+L+ P+ Q + + + Sbjct: 37 YEYLAKPGQNVMEWLSQLFGNNYGWAIIGLTVIVRLVLLPMMINQQRKSTYQQEKMSAVR 96 Query: 398 ELREKFKQSPPQVLQKA--------MIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 EK + + ++QLY+ + I+ GC P+L+Q+P+F A+Y I Sbjct: 97 PQMEKIQARQKAATTQEEKAAISNELMQLYRDNGISMTGGIGCLPLLIQLPIFSALYYAI 156 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S E+ A F G + I I+ LS Q + Sbjct: 157 RYSPELSKATFMG-----------------------ISLGKSSLILAILAFLSYLAQGYL 193 Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 S + Q + M PV+ +F S PAGL +Y+ + + +Q +I Sbjct: 194 SMIGLPEEQKKTMRLMLIMSPVMILFVSMSAPAGLGLYFFVGGLFACLQTLIIN---FFR 250 Query: 564 IGLIDRLRSTFSKNY 578 + + + K+ Sbjct: 251 PRIRREVEAELKKHP 265 >gi|313891402|ref|ZP_07825018.1| putative stage III sporulation protein J [Dialister microaerophilus UPII 345-E] gi|313120177|gb|EFR43353.1| putative stage III sporulation protein J [Dialister microaerophilus UPII 345-E] Length = 266 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 113/234 (48%), Gaps = 26/234 (11%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQY 383 F++ + ++A+ M + + Y + ++GIAI+ TV +K++ PLA KQ Sbjct: 3 DFQIPVLSTLVGYLAEIMRFCLQFCYGITQDLGYPSYGIAIIALTVIIKVILLPLAIKQI 62 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S M+ +QP++ +++K+K + + +LY ++PL+GC P+L+Q+P AI Sbjct: 63 KSMKGMQEVQPQLAAIQKKYKNDK-MRQSQEIQRLYAEKGVSPLSGCLPLLIQMPFLIAI 121 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + + + + W++ LA DPT + P+I ++S +I Sbjct: 122 FYALQGFPYDPNHASFLWLESLAVPDPTY-------------------VLPVISAVSTWI 162 Query: 504 QMKMSPPPADKGQAMILNWMPVV-FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 K + GQ ++ + + + FP+GL+IYW SN+ +QQ ++ Sbjct: 163 ISKQTSGANVAGQQKMMMMVMPLMIGYISVKFPSGLVIYWIVSNLFQGIQQTIM 216 >gi|227876537|ref|ZP_03994648.1| inner membrane protein translocase component YidC [Mobiluncus mulieris ATCC 35243] gi|227842851|gb|EEJ53049.1| inner membrane protein translocase component YidC [Mobiluncus mulieris ATCC 35243] Length = 445 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKA 414 + ++I+ TVFV+LL PL KQ +T M QP++ +++K+K Q +Q+ Sbjct: 51 GWVLSIVGLTVFVRLLLVPLFVKQIKATRAMSLAQPEMSAIQKKYKGKRDQQSMIRMQEE 110 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-----EMRHAPFWGWIKDLAAAD 469 + + + + A C PIL Q+PVFFA+Y+++ + G + + A D Sbjct: 111 TRAVQRKYGASMSASCLPILFQMPVFFALYRLLYNMKPIADGVLPGHDSIGGMGQVQAQD 170 Query: 470 ---PTNIFTLFGILPFYLPGFMHVGIWPIIMSL----SMFIQMK-MSPPPADKGQ----- 516 T G+ F M I IM SM Q ++ + Q Sbjct: 171 LWHSTFFGQSLGLTMFGPGSVMSTKIVVGIMVAYLVLSMLFQTAFLTMKNMSQEQLNSDN 230 Query: 517 ------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ MP++++F GL++YW SN I+QQ IM+ Sbjct: 231 PMVKSTKSMMYLMPLMYLFTGPVVQVGLLVYWVTSNTWMILQQFFIMRAFPTR 283 >gi|28378260|ref|NP_785152.1| integral membrane protein [Lactobacillus plantarum WCFS1] gi|38502980|sp|Q88WR8|OXAA2_LACPL RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|28271095|emb|CAD64000.1| integral membrane protein [Lactobacillus plantarum WCFS1] Length = 307 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 41/255 (16%) Query: 339 FYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ++AKP +M + N+G AI+ TV V+L+ P+ Q + + + Sbjct: 37 YEYLAKPGQNVMEWLSQLFGNNYGWAIIGLTVIVRLVLLPMMINQQRKSTYQQEKMSAVR 96 Query: 398 ELREKFKQSPPQVLQKA--------MIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 EK + + ++QLY+ + I+ GC P+L+Q+P+F A+Y I Sbjct: 97 PQMEKIQARQKAATTQEEKAAISNELMQLYRDNGISMTGGIGCLPLLIQLPIFSALYYAI 156 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S E+ A F G + I I+ LS Q + Sbjct: 157 RYSPELSKATFMG-----------------------ISLGKSSLILAILAFLSYLAQGYL 193 Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 S + Q + M PV+ +F S PAGL +Y+ + + +Q +I Sbjct: 194 SMIGLPEEQKKTMRLMLIMSPVMILFVSMSAPAGLGLYFFVGGLFACLQTLIIN---FFR 250 Query: 564 IGLIDRLRSTFSKNY 578 + + + K+ Sbjct: 251 PRIRREVEAELKKHP 265 >gi|323705845|ref|ZP_08117417.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium xylanolyticum LX-11] gi|323534841|gb|EGB24620.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacterium xylanolyticum LX-11] Length = 218 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 111/217 (51%), Gaps = 23/217 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 I + L+ + Y+ VGN+G+AI++ T+ ++++ P +Q + MK I P ++E+++ Sbjct: 4 IGMYLGQLLKFIYDFVGNYGVAIIIFTILIRVILLPFYVQQMGTMRKMKEISPLVEEIKK 63 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K+ + PQ + + M++LYK N+NP++GC P+LL + + + ++ ++ A + W Sbjct: 64 KYAK-DPQKMNEEMMKLYKEKNVNPMSGCLPMLLPLIILWPLFAMLRSYPAFSTAS-FLW 121 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 +K LA DP I PI+ ++ +I M D Q + Sbjct: 122 LKSLAEKDPYF-------------------ILPILSGVTTYISSAM--IQTDNNQKSMNL 160 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 M ++ S PAG+ IYW SN+ IVQQ + ++ Sbjct: 161 IMSAFMIWITVSLPAGVGIYWVTSNIFQIVQQYIFLR 197 >gi|206901409|ref|YP_002251654.1| sporulation associated-membrane protein [Dictyoglomus thermophilum H-6-12] gi|206740512|gb|ACI19570.1| sporulation associated-membrane protein [Dictyoglomus thermophilum H-6-12] Length = 209 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 29/230 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +A + ++ FY L GN+G+AI+ + V+++ +PL Q S + IQP+I Sbjct: 1 MINALANGLGYILELFYKLTGNYGVAIIFLVILVRIILYPLTHAQLKSLFMQQKIQPEIK 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +++EKFK P+ + K ++ LY+ + INP+ GC P+L+Q P+ A+Y+++ + P Sbjct: 61 KIQEKFKD-DPKEMNKQIMLLYQQYKINPMMGCLPLLIQFPILIALYQLLLH-YKYAVTP 118 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADK 514 + WI DL D I I+M+L + ++S P K Sbjct: 119 KFLWISDLTKPD---------------------YILLIVMALVTYFSGELSSLASSPEQK 157 Query: 515 GQAMILNWMPVVFV---FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 Q I+N + F L PAG+++YW S++ ++QQ ++ ++H Sbjct: 158 SQQRIMNIFTTMLFTGMFLLYKVPAGVMLYWLVSSLFQLLQQVIVFRLHK 207 >gi|168214845|ref|ZP_02640470.1| membrane protein OxaA [Clostridium perfringens CPE str. F4969] gi|169343448|ref|ZP_02864448.1| membrane protein OxaA [Clostridium perfringens C str. JGS1495] gi|169298400|gb|EDS80489.1| membrane protein OxaA [Clostridium perfringens C str. JGS1495] gi|170713745|gb|EDT25927.1| membrane protein OxaA [Clostridium perfringens CPE str. F4969] Length = 238 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 12/219 (5%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F A F+ + + + I I L T+ V+L+ PL KQ S M+ IQP+I Sbjct: 13 TMIFQAIHGFVASLDIFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIA 72 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L++K+K +P + Q+ M++LYK +N+NP++GC P+L+Q+P+ FA+Y V + E++ Sbjct: 73 KLQKKYKNNPEKA-QQEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFTGLAELKGVS 131 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W+ DL A D T I + YL + + F Q + P Sbjct: 132 -FLWLGDLWAPDRTFILPILSAATTYLSSLLM----------TKFTQSQAGGAPGGMNMN 180 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + M + FP+ L++YW N+I +VQ I Sbjct: 181 TMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQTYFI 219 >gi|325685110|gb|EGD27241.1| ParB/SpoJ family partitioning protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 289 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 29/239 (12%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 +P +W + + ++ G++G AI++ TV ++++ PL Q ST Sbjct: 39 MPISHNSSNWWDAWVVYYLSQFVLWIAKVCGGSYGWAIIIFTVIIRVILLPLNAVQINST 98 Query: 387 ANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 M+ IQP++ L+EK+ L + +LYK +NP AGC P+++Q+PV +A+ Sbjct: 99 RKMQEIQPELKALQEKYSSKDLETRNKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWAL 158 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y+ I + EM + W+ DL DP I PI+ ++ F+ Sbjct: 159 YQAIWRTPEM-QNGKFLWM-DLGKPDPYY-------------------ILPILATVFTFL 197 Query: 504 QMKMS----PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ P + ++ M ++ F + + +YW SN+ + Q V+ Sbjct: 198 SSYIATLSVPKSSQTTMTKMMSYVMAIMVGIWAIVFQSAISLYWVISNLFQVGQTLVLQ 256 >gi|238478612|ref|NP_001154364.1| ALB4 (ALBINA 4) [Arabidopsis thaliana] gi|332192419|gb|AEE30540.1| ALBINO3-like protein 1 [Arabidopsis thaliana] Length = 462 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 20/228 (8%) Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 + + + S MK++ P+I ++E++ ++ +LYK INPLAGC P Sbjct: 100 IANYMETILKVESAMAMKSLTPQIKAIQERYAGDQEKIQL-ETARLYKLAGINPLAGCLP 158 Query: 433 ILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP-------TNIFTLF----GIL 480 L IPV+ +Y+ +S + E + WI LA + I LF G Sbjct: 159 TLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFIEGHP 218 Query: 481 PFYLPGFMHVGIWPIIMSLSMF--IQMKMSPPPADKGQ---AMILNWMPVVFVFALSSFP 535 P P + + P+++ S + IQ+ S D + +P++ + S P Sbjct: 219 PLGWPDTLAYLVLPLLLVFSQYLSIQIMQSSQSNDPAMKSSQAVTKLLPLMIGYFALSVP 278 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE--IGLIDRLRSTFSKNYNSQ 581 +GL +YW +N++S QQ + K GA+ + L + K + Sbjct: 279 SGLSLYWLTNNILSTAQQVWLQKYGGAKNPVEKFTNLVTKEDKTQQIE 326 >gi|154508234|ref|ZP_02043876.1| hypothetical protein ACTODO_00728 [Actinomyces odontolyticus ATCC 17982] gi|153797868|gb|EDN80288.1| hypothetical protein ACTODO_00728 [Actinomyces odontolyticus ATCC 17982] Length = 446 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 122/263 (46%), Gaps = 31/263 (11%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F I + W + + +L+ + ++I+L T+ V++ PL KQ S+ M Sbjct: 9 FAWAISYVWVWI--HDLLVLLGMSSGSGMAWVLSIVLLTILVRIAIIPLFLKQIRSSRAM 66 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYK 445 + IQP++ +++EK+K QV ++ M++ L + H ++P A C P+L+Q+PV F +Y+ Sbjct: 67 QAIQPEMRKIQEKYKGKKDQVSRQKMMEETQALQRKHKVSPFASCLPMLVQMPVLFGMYR 126 Query: 446 VIS--ISLEMRHAPFWGWIKD----LAAADPTNIFTLFGIL---------PFYLPGFMHV 490 I S+ + G D L + T I + + P + V Sbjct: 127 AIIAVSSISNGTYTYRGEATDHLGPLTESVSTEIVNSTVLGVPLSHTLRESWGQPTIVAV 186 Query: 491 GIWPI-IMSLSMFIQMKM----SPP-----PADKGQAMILNWMPVVFVFALSSFPAGLII 540 I I +M + F+ M++ + P P + Q ++ MP++F+F+ + F G++I Sbjct: 187 FIAAIVLMVVLQFVSMRLSFSRNMPDMGDNPMAQSQRSMMYVMPLMFIFSGAFFQMGVVI 246 Query: 541 YWSWSNVISIVQQAVIMKMHGAE 563 Y ++ ++ Q +K+ Sbjct: 247 YTVTASFWALAQSLWTIKVMPTP 269 >gi|226362891|ref|YP_002780671.1| inner membrane protein translocase component YidC [Rhodococcus opacus B4] gi|226241378|dbj|BAH51726.1| putative OxaA family protein [Rhodococcus opacus B4] Length = 367 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 104/282 (36%), Gaps = 48/282 (17%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F G + K + + + ++++ ++ + + KQ +T Sbjct: 3 DFIYYPVSGILWVWHKVFGAIPFLGPDSGITWALSVVFLVFTLRAVLYKPFVKQVRTTRQ 62 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP+I L++K+ Q M +L K H NP+ GC P+L Q PVF ++ V+ Sbjct: 63 MQELQPQIKALQKKYSG-DRQRQAVEMQKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVLR 121 Query: 449 I--------------------------SLE---------MRHAPFWGWIKDLAAADPTNI 473 S+E + AP WI A + Sbjct: 122 SFNRTGTGIGQLGMSVEANANTPNYFFSVEDVQSFLSARLFGAPISAWITMPKAQ--LDA 179 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-----MSPPPADKGQAMILN-----WM 523 F +G +P L + II S++ + SP A Q+ I+N Sbjct: 180 FAAYGPIPTVLNIAVVAVPLMIIASIATHFNSRASVARQSPEAAANPQSAIMNKLALWVF 239 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+ + P +++YW +N+ + QQ ++ + AE Sbjct: 240 PLGVLVGGPFLPIAILLYWVSNNIWTYGQQHIVFRRIDAEEE 281 >gi|206896386|ref|YP_002247364.1| membrane protein OxaA 1 [Coprothermobacter proteolyticus DSM 5265] gi|206739003|gb|ACI18081.1| membrane protein OxaA 1 [Coprothermobacter proteolyticus DSM 5265] Length = 221 Score = 114 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 26/227 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 I+ M++++ Y++V N+ + I+L T+ +KL+ PL +Q ++ + IQ ++ Sbjct: 1 MVQSISNFFSMILNWLYSVVPNYPVDIILMTILLKLILEPLTYQQLRTSFVISRIQGELQ 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+ +K+K P Q + ++YK H +NPL GC LLQIP+FF +Y + + + P Sbjct: 61 EIAKKYKNDPQQA-AQEQSKIYKEHGVNPLIGCLLPLLQIPIFFGLYGSLVQNPNFKGLP 119 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPA 512 + W+ D++ DPT I I M + + Q K + P Sbjct: 120 -FLWVPDISKPDPTW-------------------ITVIAMVVVTYFQFKFTSQATTDPAM 159 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + Q M++ ++ + SFP G+ +YW ++ISI++ +I KM Sbjct: 160 QRQQNMMMWIFVIMIGWIARSFPFGVALYWMAFSLISILESFIIRKM 206 >gi|323126634|gb|ADX23931.1| OxaA-like protein precursor [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 307 Score = 114 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 101/289 (34%), Gaps = 39/289 (13%) Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 N + + + W + + + + N +G+AI+ Sbjct: 6 NRILFSGLALSILFTLTGCVGRDAHGNPKGMIWEFLGKPMSYFIDYFANNAGLGYGLAII 65 Query: 366 LTTVFVKLLF--------FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 + T+ V+ L + + + +P +++ Q Q ++ Sbjct: 66 IVTIVVRTLILPLGLYQSWKASYQSEKMAFLKPVFEPINKRIKQASSQEEKMAAQTELMA 125 Query: 418 LYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + H INPL GC P+L+Q+P F A+Y + + + F G DL + Sbjct: 126 AQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQYTKGVSISTFMG--IDLGSR------- 176 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFAL 531 + I++ F Q +S + Q ++ MP++ + Sbjct: 177 --------------SLVLTAIIAALYFFQSWLSMMAVSEEQREQMKAMMYTMPIMMIVMS 222 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 S PAG+ +YW SI+QQ + + + L ++ ++KN Sbjct: 223 FSLPAGVGLYWLVGGFFSIIQQLITT--YILKPRLHKQIEEEYAKNPPK 269 >gi|110801038|ref|YP_697348.1| putative inner membrane protein translocase component YidC [Clostridium perfringens ATCC 13124] gi|168211555|ref|ZP_02637180.1| membrane protein OxaA [Clostridium perfringens B str. ATCC 3626] gi|110675685|gb|ABG84672.1| membrane protein OxaA [Clostridium perfringens ATCC 13124] gi|170710464|gb|EDT22646.1| membrane protein OxaA [Clostridium perfringens B str. ATCC 3626] Length = 238 Score = 114 bits (284), Expect = 5e-23, Method: Composition-based stats. Identities = 66/238 (27%), Positives = 113/238 (47%), Gaps = 16/238 (6%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F A F+ + + + I I L T+ V+L+ PL KQ S M+ IQP+I Sbjct: 13 TMIFQAIHGFVASLDIFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIA 72 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L++K+K +P + Q+ M++LYK +N+NP++GC P+L+Q+P+ FA+Y V + E++ Sbjct: 73 KLQKKYKNNPEKA-QQEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFTGLTELQGVS 131 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W+ DL A D T I + YL + + F Q + P Sbjct: 132 -FLWLGDLWAPDRTFILPILSAATTYLSSLLM----------TKFTQSQAGGAPGGMNMN 180 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM----KMHGAEIGLIDRLR 571 + M + FP+ L++YW N+I +VQ I+ + E ++ Sbjct: 181 TMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQTYFIVVLPSRKRAKEKEQYKDIK 238 >gi|56965671|ref|YP_177405.1| stage III sporulation protein J [Bacillus clausii KSM-K16] gi|56911917|dbj|BAD66444.1| stage III sporulation protein J [Bacillus clausii KSM-K16] Length = 265 Score = 114 bits (284), Expect = 5e-23, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 39/262 (14%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 + P + +F+ F++ + G+FG I++ T+ ++LL PLA K Sbjct: 23 NTNEPITAESTGFWNSFFVYPMSFLITFFSDLTGGHFGWGIIIVTILIRLLILPLALKSQ 82 Query: 384 VSTANMKNIQPKIDELREKFKQ-----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 ST M+ ++P++ E++EK K+ + +Q M+ LY+ H +NP AGC P L+QIP Sbjct: 83 KSTRAMQVLRPEMQEIQEKMKKAQGNPEKQREVQAEMLSLYQKHGVNPAAGCLPALVQIP 142 Query: 439 VFFAIYKVISISLEM--RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 + A+Y I + E+ A + W +L + D I P+I Sbjct: 143 IVMALYFAIMRTEEIGVGPASAFLWF-NLGSPD---------------------YILPVI 180 Query: 497 MSLSMFIQMKMSPPPA--------DKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNV 547 ++ F+Q KMS I+ + MPV+ V A + P+ L +YW N+ Sbjct: 181 AGITTFVQFKMSMSQMPANPLGEGMPNPMNIMLYIMPVMIVIAGITLPSALALYWVVGNL 240 Query: 548 ISIVQQAVIM-KMHGAEIGLID 568 IVQ I+ + + + + Sbjct: 241 FMIVQTYFIIVRPNMTKEEVQK 262 >gi|307243391|ref|ZP_07525548.1| stage III sporulation protein J family protein [Peptostreptococcus stomatis DSM 17678] gi|306493201|gb|EFM65197.1| stage III sporulation protein J family protein [Peptostreptococcus stomatis DSM 17678] Length = 233 Score = 114 bits (284), Expect = 5e-23, Method: Composition-based stats. Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 38/255 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IA + + Y ++GN+G++I++ T+ VK++ PL KQ ST M I PK+ E Sbjct: 1 MGQIASLFGIALKAIYGVIGNYGLSIIVFTIIVKMILMPLTVKQTKSTFAMSEINPKVKE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL------- 451 ++ K+K P+ + + +LYK INPL+GC PIL+Q+P+ ++ V + Sbjct: 61 IQAKYKN-KPEKQNEEISKLYKESGINPLSGCLPILIQMPILMGLFYVFKDPVTHGVFAS 119 Query: 452 ---EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-M 507 + WIK L+ D I + +S ++ K M Sbjct: 120 KAAMAAANGNFLWIKALSKPD---------------------YILAVFSGVSAYLMQKVM 158 Query: 508 SPPPADKGQAMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 +P +G +++W+ + ++ FPA L +YW SN+ S+ Q +I + +++ Sbjct: 159 TPKDQIEGPMKMMSWLLAGMSLYWGFIFPAALTLYWGVSNIFSVFQYYLITRPLKSKLEQ 218 Query: 567 ----IDRLRSTFSKN 577 + +S+F K Sbjct: 219 EKADKEAGKSSFKKK 233 >gi|20809127|ref|NP_624298.1| preprotein translocase subunit YidC [Thermoanaerobacter tengcongensis MB4] gi|38503074|sp|Q8R6K6|OXAA_THETN RecName: Full=Membrane protein oxaA gi|20517807|gb|AAM25902.1| Preprotein translocase subunit YidC [Thermoanaerobacter tengcongensis MB4] Length = 206 Score = 114 bits (284), Expect = 5e-23, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 23/220 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IA + L+ + ++ VGN+G+AI++ TVF+++L P +Q MK IQP ++E Sbjct: 1 MATIAMYLGQLLEFIHHYVGNYGVAIIVFTVFIRILLLPFYIQQMAMMKKMKEIQPLVEE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L++K+ PQ L ++LY+ INP GC P+LL + + + ++ ++ A Sbjct: 61 LKKKY-GKDPQKLNMETMKLYQEKKINPFGGCLPMLLPLIILWPLFTMLRTYPAFSTAS- 118 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W+ LA DP I PI+ +++ +I M DK Q Sbjct: 119 FLWMHSLAERDPYY-------------------IIPILATVTTYISSAM--VATDKSQNS 157 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + M + + + PAG+ IYW SN+ IVQQ + M+ Sbjct: 158 MNIMMSLFMGWITVTLPAGVGIYWVTSNIFQIVQQYIFMR 197 >gi|167770830|ref|ZP_02442883.1| hypothetical protein ANACOL_02183 [Anaerotruncus colihominis DSM 17241] gi|167666870|gb|EDS11000.1| hypothetical protein ANACOL_02183 [Anaerotruncus colihominis DSM 17241] Length = 355 Score = 114 bits (284), Expect = 5e-23, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 115/278 (41%), Gaps = 53/278 (19%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + P+ +M + ++ +G+A++L T+ V++ PL+ KQ S M+ +P+++E Sbjct: 5 YTIFGYPLGWIMWACFKVLPIYGVALVLFTLIVRVCLVPLSIKQQKSMVKMQIFRPRMEE 64 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRH- 455 +++K+ + ++ + M++LY+ + NP +GC P+L+Q+P+ F +Y VI + +R Sbjct: 65 IQKKYANNREKM-NEEMMKLYEEEHYNPASGCLPMLIQMPILFGLYDVIQRPITHLLRIS 123 Query: 456 ----------APFWGWIKDLAA---------------ADPTNIFTLF-----------GI 479 A +LA D + F G Sbjct: 124 GPVIDQATEIAATVLNNANLAKDYSRQIRIIDAVNTNPDAFSGLGDFVSKVQTLDLSIGP 183 Query: 480 LPFYLPGFMHVGIWPIIMSLSM-------FIQMKM------SPPPADKGQAMILNWMPVV 526 + + + +I S F+ M+ + A ++ MP++ Sbjct: 184 IDLTQQPTFALNLLILIPIFSFLTSLLVSFVSMRQTADMSGNAAAAAGMSKSMMIMMPLM 243 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + PAGL +YW SN++ VQ ++ K + Sbjct: 244 SAWISFVVPAGLGVYWIISNILMAVQTYLLNKFMNPKE 281 >gi|226355228|ref|YP_002784968.1| 60 kDa inner membrane insertion protein [Deinococcus deserti VCD115] gi|226317218|gb|ACO45214.1| putative 60 kDa inner membrane insertion protein, Membrane protein OxaA [Deinococcus deserti VCD115] Length = 542 Score = 114 bits (284), Expect = 5e-23, Method: Composition-based stats. Identities = 93/495 (18%), Positives = 171/495 (34%), Gaps = 61/495 (12%) Query: 74 KNPSLIGSINLKGAQFDDLNLRGY------HLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 + N +G ++ Y L + + N V Sbjct: 53 TSNLQDVVFNARGEVI-GWYVKNYAGTPFIKRRSDGTYDFSALKNGKSIINMVGTRKSLV 111 Query: 128 STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVT 187 A+ ++ TV L + I +T++L V T Sbjct: 112 VQADGLDPAQPATVTTPKVTSDLPKNRQDAVFRYTQGGITVTKTVTLHPRNYKMDVRTSV 171 Query: 188 NNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHE 247 +Q G P+ + G + +Y+ +++ Sbjct: 172 EGGPEQYTLLFPGLGNAENPRVQALPASGEPAAAQGSGTLEVENIQYAALQEVP------ 225 Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNF 307 G++ + + + + + Q + + + G + Sbjct: 226 ----SGMNSQVALATIVRPQ-QGTRADVALTGGRQGLIQVRLEGDSSLEVYGGRNELIHL 280 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 +G E P + +F I+ + LM Y +GN+G+ ++ Sbjct: 281 YQSGYTELPGLFEPN---------------FFGKISLMIVKLMESLYKFIGNWGLVLVAL 325 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHN 423 T+ ++L+ +PL + Q +TA M+ +QPKI E++EK+K +Q M QLY+ +N Sbjct: 326 TLLLRLIMWPLMQAQGRTTARMQIMQPKIKEIQEKYKDKRDMESQRAMQSEMQQLYRDYN 385 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 NP GC+ LL PV A++ I E + W+ DLA DP I L ++ Sbjct: 386 FNPA-GCFSTLLPFPVLIALWSTIRN-FEF--DSGFLWLPDLAIPDPFYILALIYLVVNI 441 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 ++ P MF Q ++ ++F++ +FPAG+ IY Sbjct: 442 GQLYVMTRKTP-----DMFKQQ---------------AFIYLIFLYFALTFPAGVTIYII 481 Query: 544 WSNVISIVQQAVIMK 558 S +I I+QQ +I K Sbjct: 482 LSTLIGIIQQVIINK 496 >gi|325126646|gb|ADY85976.1| Stage III sporulation protein J [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 289 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 29/233 (12%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +W + + ++ G++G AI++ TV ++++ PL Q ST M+ I Sbjct: 45 SSNWWDAWVVYYLSQFVLWIAKVCGGSYGWAIIIFTVIIRVILLPLNAVQINSTRKMQEI 104 Query: 393 QPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 QP++ L+EK+ L + +LYK +NP AGC P+++Q+PV +A+Y+ I Sbjct: 105 QPELKALQEKYSSKDLETRNKLNEETQKLYKEAGVNPYAGCLPMVIQLPVMWALYQAIWR 164 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS- 508 + EM + W+ DL DP I PI+ ++ F+ ++ Sbjct: 165 TPEM-QNGKFLWM-DLGKPDPYY-------------------ILPILATVFTFLSSYIAT 203 Query: 509 ---PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P + ++ M ++ F + + +YW SN+ + Q V+ Sbjct: 204 LSVPKSSQTTMTKMMSYVMAIMVGIWAIVFQSAIPLYWVISNLFQVGQTLVLQ 256 >gi|157311737|ref|NP_001098600.1| mitochondrial inner membrane protein OXA1L [Danio rerio] gi|156230848|gb|AAI52010.1| Oxa1l protein [Danio rerio] Length = 469 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 95/295 (32%), Gaps = 42/295 (14%) Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGA-KEFPTIHHYEKDLAIPRFEMLI 334 D A A + P + T + + + ++ + Sbjct: 94 SEPPDAAISAPASIPAPAVDPTPSVTPPITEQVAEAPLTALDVLQGVGAEASLSELGL-- 151 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + L+ + + +G I+ T+ + FP+ K A + N+ Sbjct: 152 ---CNSTPVGLIQNLLEFMHVSIGLPWWGAIVAGTIVARCAVFPVIVKGQREAAKLNNVM 208 Query: 394 PKIDELREKFKQSPPQVLQKAM-------IQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 P++ +L + ++ + + K ++NP G L+Q P+F + + Sbjct: 209 PEMTKLTNRMNEAKQSGNKFEFSKAYTDLMMFQKKKDVNPFRGFLVPLVQAPIFLSFFIA 268 Query: 447 ISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 + E+ W DL AADP I PI ++ +M Sbjct: 269 LRKMSELPVPSLQTGGLWWFTDLTAADPFY-------------------ILPIAVTGTMV 309 Query: 503 IQMKMSPPPA--DK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +++ + + MP V + +FP + YW SN+ S+ Q Sbjct: 310 AILELGAESGVDNPNLRAMKTVFRIMPFVILPLTINFPTAVFTYWMTSNLFSLAQ 364 >gi|295111773|emb|CBL28523.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Synergistetes bacterium SGP1] Length = 259 Score = 113 bits (283), Expect = 6e-23, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 113/244 (46%), Gaps = 27/244 (11%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 L+ Y + ++G+AI+L TV V++ PL +KQ VS M+ +QP+I L+ K+ Sbjct: 1 MWLLETLYGVTNSWGLAIILLTVIVRIAMHPLTQKQMVSMQRMQKLQPRIKVLQNKYGDD 60 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---------SLEMRHAP 457 L + M+ LYK I+P AGC P+L+Q+P+F +Y+V+ ++ + + Sbjct: 61 KET-LNREMMALYKEEKISPAAGCLPLLIQLPIFILLYRVLYNNDFAGATFLTVHLDGSV 119 Query: 458 FWGWIKDLAAADP----------------TNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 L D + FT +L + ++ I I+++ Sbjct: 120 LTTMADALNLVDKAGVPIPRDQLGVVMVFFSSFTNLPLLFSNVGMWLPNMILLILIAFLT 179 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + Q +S + AM+ +MP++ F G+++YW S+++ +V Q +M+ Sbjct: 180 WYQQHLSSA-GNPQMAMMSWFMPLLLTFICIGLQGGVLLYWGVSSLMGVVHQLRVMRKTD 238 Query: 562 AEIG 565 E+ Sbjct: 239 EEMR 242 >gi|327285652|ref|XP_003227547.1| PREDICTED: mitochondrial inner membrane protein OXA1L-like [Anolis carolinensis] Length = 421 Score = 113 bits (283), Expect = 6e-23, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 93/268 (34%), Gaps = 36/268 (13%) Query: 302 ITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFG 361 T ++ + A+ + + L+ + VG Sbjct: 74 GTQVVQPIVSPPIEASLPTADLGQAVQELSFAELGLGAHTPVGLIQNLLECLHVDVGLPW 133 Query: 362 IA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ--- 417 I+ TV + L FPL K + N P+I +L + ++ + + Sbjct: 134 WGAIVAGTVVARCLVFPLIVKGQREAVKLNNHLPQITQLTTRMNEAKQSGNKFEFAKAYS 193 Query: 418 ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAAD 469 KTHN+NPL G L+Q P+F + + + E+ W DL AAD Sbjct: 194 DLALYQKTHNVNPLRGFLVPLVQAPIFISFFIALRKMAELPVPSMQTGGLWWFADLTAAD 253 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKG---QAMILNWMP 524 P I P+ ++++M+ +++ + + MP Sbjct: 254 PYY-------------------ILPLAVTVTMWAILELGAESGVSNPNLRVMKTVFRVMP 294 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + SFP + YW SN+ S+VQ Sbjct: 295 IAILPLTISFPTAIFTYWMTSNLFSLVQ 322 >gi|18311639|ref|NP_563573.1| putative inner membrane protein translocase component YidC [Clostridium perfringens str. 13] gi|168207740|ref|ZP_02633745.1| membrane protein OxaA [Clostridium perfringens E str. JGS1987] gi|168218053|ref|ZP_02643678.1| membrane protein OxaA [Clostridium perfringens NCTC 8239] gi|38503106|sp|Q8XH28|OXAA_CLOPE RecName: Full=Membrane protein oxaA gi|18146323|dbj|BAB82363.1| stage III sporulation protein J [Clostridium perfringens str. 13] gi|170660941|gb|EDT13624.1| membrane protein OxaA [Clostridium perfringens E str. JGS1987] gi|182379924|gb|EDT77403.1| membrane protein OxaA [Clostridium perfringens NCTC 8239] Length = 238 Score = 113 bits (283), Expect = 6e-23, Method: Composition-based stats. Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 12/219 (5%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F A F+ + + + I I L T+ V+L+ PL KQ S M+ IQP+I Sbjct: 13 TMIFQAIHGFVASLDIFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIA 72 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L++K+K +P + Q+ M++LYK +N+NP++GC P+L+Q+P+ FA+Y V + E++ Sbjct: 73 KLQKKYKNNPEKA-QQEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFTGLTELQGVS 131 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W+ DL A D T I + YL + + F Q + P Sbjct: 132 -FLWLGDLWAPDRTFILPILSAATTYLSSLLM----------TKFTQSQAGGAPGGMNMN 180 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + M + FP+ L++YW N+I +VQ I Sbjct: 181 TMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQTYFI 219 >gi|258512905|ref|YP_003186339.1| membrane protein insertase, YidC/Oxa1 family [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479631|gb|ACV59950.1| membrane protein insertase, YidC/Oxa1 family [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 344 Score = 113 bits (283), Expect = 6e-23, Method: Composition-based stats. Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 24/223 (10%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + I + LM YF +L GN +GI+I+ + V+L+ PL +Q M +Q Sbjct: 37 PKNAWGSILHGISDLMDYFAHLFGNDYGISILFMAILVRLVVLPLFLRQIRFQRAMVKLQ 96 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P+I ++R K+ + Q +Q+ +++LY+ +NPLAGC+P+L+Q P +A Y I ++ M Sbjct: 97 PEIQKIRTKY-KFDNQKMQEELMKLYQEAGMNPLAGCFPMLIQFPFLWAFYGAIVGNIGM 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + +F + + + P++ +LS + +S Sbjct: 156 RQ---------------STFLGIFPLGHWDTH-----YVLPVLAALSTLLSSWLSMQS-Q 194 Query: 514 KGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 Q + ++ PV+ F P GL++YW ++N++ +Q + Sbjct: 195 PVQQKSMLFVYPVMIFFFTFRLPGGLVLYWIYTNLLVALQVYL 237 >gi|311029446|ref|ZP_07707536.1| membrane protein OxaA [Bacillus sp. m3-13] Length = 256 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 58/230 (25%), Positives = 113/230 (49%), Gaps = 27/230 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ P+ + ++ + ++GI+I++ T+ ++ L PLA KQ + M+ ++P++ Sbjct: 34 WNHYFVYPLSLALTTVADWTSGSYGISIIIVTIAIRTLILPLALKQQKNMLAMQKLKPEM 93 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 + L++K+K +Q+ ++ LY+TH +NP AGC+P+L+Q+PV A Y I + E Sbjct: 94 EALQKKYKDKKKPDDQKEMQQELMALYQTHKVNPAAGCFPMLIQMPVIMAFYYAIGRTTE 153 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511 + F+ L DP I P++ +++ FIQ +++ Sbjct: 154 IAEHSFFW--VSLGQPDPLY-------------------ILPVVAAITTFIQTRVTLTDD 192 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 M++N +PV + A + P+ L +YW N+ I Q + K Sbjct: 193 VQPQMKMVMNIIPVFILIAGLTLPSALALYWVIGNLFGIGQGLYLKKRMK 242 >gi|116514957|ref|YP_802586.1| hypothetical protein BCc_007 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256811|gb|ABJ90493.1| preprotein translocase, membrane component [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 285 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 76/303 (25%), Positives = 139/303 (45%), Gaps = 27/303 (8%) Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 + KY+ + I + F F + + + Sbjct: 1 MLQKYFFTTRILKYLKLYT--FYSHQLNDFFSSFNFISKLSYFKSYILYNIFSNFLCKLE 58 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + + ++ +G + IA P+F L+++FY N+GIAI+ T+ +K+ Sbjct: 59 MQINLSKISDN-----LSLINRYGKLHIIAYPLFHLLNFFYKFFNNWGIAIIFVTILIKI 113 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 + +PL K QY S MK +QPKID L+ K+ + ++ K +++LY + NP + Sbjct: 114 IIYPLTKLQYTSVLQMKLLQPKIDILKNKYADNKDKM-NKKILELYSSKKFNPFNSFFSF 172 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q P+F A Y V+S S+E+++APF+ WIKDL++ DP + + Sbjct: 173 LIQTPIFLAFYSVLSSSVELKNAPFFLWIKDLSSYDPYH-------------------VL 213 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 P++M +S+ + + L++ V F FP+GLI+Y+ SN+++++Q Sbjct: 214 PLLMGISILLTQISEIDDKTTRKRKFLSFFSVFFAAFFLWFPSGLILYYITSNIVTLIQH 273 Query: 554 AVI 556 I Sbjct: 274 WFI 276 >gi|118442981|ref|YP_876977.1| inner membrane protein translocase component YidC [Clostridium novyi NT] gi|118133437|gb|ABK60481.1| Membrane protein oxaA [Clostridium novyi NT] Length = 246 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 26/238 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + F + S N ++G+ I++ T+ ++L+ FPL KQ S M IQP++ Sbjct: 22 FIQFFQVMHNWIHSVVANPNISYGLTIIIVTIIIRLVLFPLNYKQIKSQVAMNEIQPELK 81 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+ K+K PQ Q+ M++LYK + +NPL GC P+L+Q P+ A+Y V + Sbjct: 82 KLQNKYKN-DPQKQQQEMMKLYKEYGVNPLGGCLPLLIQWPILIALYYVFNN-------- 132 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-----VGIWPIIMSLSMFIQMK-MSPPP 511 L+ DP+ F L P + I PI+ L ++ M+ Sbjct: 133 -------LSKIDPSITNVTFLGLKLMNPAILSPSHWYTWILPILSGLLTYLSTAIMTSKN 185 Query: 512 ADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 AD Q M+ +M + + F L++YW +++ I Q V + + Sbjct: 186 ADSAQIKQTRMMGGFMTLFITYMSFKFSTALVLYWVTNSLFQIGQTLVTQRSQKVKKE 243 >gi|166032896|ref|ZP_02235725.1| hypothetical protein DORFOR_02617 [Dorea formicigenerans ATCC 27755] gi|166027253|gb|EDR46010.1| hypothetical protein DORFOR_02617 [Dorea formicigenerans ATCC 27755] Length = 358 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 25/259 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W + ML + G GI+I+L T+ V L P+ Q S+ +QP+ Sbjct: 24 WVLGKVMNFIYTMLDGALPSDTGLVGISIILYTILVYTLMLPMTINQQRSSKMQAVVQPE 83 Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + +++K+K Q Q+ + Q+Y + ++ + GC P+L+Q+P FA+Y VI Sbjct: 84 VMAIQKKYKNKKDQASMLKQQEEIQQVYDKYGVSMMGGCLPLLIQMPFLFALYPVIYSIS 143 Query: 452 EM-----RHAPFWGWIKDLA-AADPTNIFTLFGILPFYLPGFMHV--GIWPIIMSLSMFI 503 + A + I D+ G Y + + + P++ + + ++ Sbjct: 144 DYVPNITAQANKFLTIPDMTITPGNMLSMAKSGETMGYSAAALVITAILLPVLSAFTQYL 203 Query: 504 QMKMSPP------------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 MK+S P + MP+ + + + P G+ IYW S ++ +V Sbjct: 204 NMKLSMAVNGSNRPADKDDPTAATMRTMNMTMPLFSLVMVFTLPTGIGIYWIVSAIVRMV 263 Query: 552 QQAVIMKMHGAEIGLIDRL 570 QQ I K H ++I + D + Sbjct: 264 QQVFINK-HLSKISVDDMI 281 >gi|153854259|ref|ZP_01995558.1| hypothetical protein DORLON_01552 [Dorea longicatena DSM 13814] gi|149753034|gb|EDM62965.1| hypothetical protein DORLON_01552 [Dorea longicatena DSM 13814] Length = 363 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 68/291 (23%), Positives = 125/291 (42%), Gaps = 31/291 (10%) Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN--------FGIAIMLTTVFVK 372 E+ + +P +W + + +M++ YN + G++I+L T+FV Sbjct: 1 MEEKIMVPSLLTAANWPIVGQLCWILGKVMNFIYNFLDKCLPSDSGLVGLSIILYTIFVY 60 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA 428 L PL KQ ++ + P+I +++K+K Q Q+ + Q+Y + + A Sbjct: 61 TLLLPLTIKQQRTSKMSSVMNPEIQAIQKKYKNKKDQASMMKQQEEIQQVYDKYGTSMSA 120 Query: 429 GCWPILLQIPVFFAIYKVISI----SLEMRHAP----FWGWIKDLAAADPTNIFTLFGIL 480 GC P+L+Q+P+ FA+Y VI E++ AP + + DL + I Sbjct: 121 GCLPLLIQMPLLFALYPVIYNIQKYVPEIKTAPKAVNVFLTLPDLTISPMQMIKNSGSYG 180 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFA 530 + + + P++ L+ + +K+S P + MP+ VF Sbjct: 181 FPAIMIIITAILLPVLSGLTQYGSIKLSQAISGQQLDKDNPMASTMNTMNITMPLFSVFM 240 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + S P G+ +YW S V+ VQQ I K H ++I + + L K + Sbjct: 241 VFSLPTGIGLYWIVSAVVRCVQQVFINK-HLSKISVEEILEQNKEKAEEKR 290 >gi|323452174|gb|EGB08049.1| hypothetical protein AURANDRAFT_11603 [Aureococcus anophagefferens] Length = 219 Score = 113 bits (282), Expect = 7e-23, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 17/217 (7%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 +VG++G+AI+L T+ +K + FPL +Q ST M+ +QP I ++ K+ P Q+ M Sbjct: 2 VVGSYGVAIVLFTLLLKAVTFPLNYQQIESTTKMQALQPAIKRIQAKYAADPQQMNIM-M 60 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAA------ 468 +LY+ + +NPLAGC P L+QIP+F A+Y+ + + E + WI +L Sbjct: 61 AELYQENELNPLAGCLPALVQIPIFIALYRSLLSLAKEDLLEESFLWIPNLEGPVYGAQN 120 Query: 469 -DPTNIF--TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK------GQAMI 519 D F I P + P ++ ++ + PPAD + Sbjct: 121 ADWLFKFDQWNGAIPPLGWHDTVAYLALPCLLVVAQSASTTLLQPPADPNNEAAQTSNQV 180 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 L ++P++ F + PAGL IYW +N+I+ I Sbjct: 181 LKYLPLMVGFFSLNVPAGLTIYWFCNNIITTASTLYI 217 >gi|291230686|ref|XP_002735298.1| PREDICTED: Inner membrane protein OXA1L, mitochondrial-like [Saccoglossus kowalevskii] Length = 424 Score = 113 bits (282), Expect = 8e-23, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 107/326 (32%), Gaps = 29/326 (8%) Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 ++ S G ++KY + S + + + Sbjct: 16 RNQHSWRTHHVLIHGNNNKYSLCTKLTRHHWKILSTTSVIRHNSSTTHTQTQPVADVTEK 75 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 I ++ + A + +K +P E+ + + + NL Sbjct: 76 LSQIDPSSTVVAQSVTPEVTEIVQKVQEVPFSELGLGNFTPVGAIQNCLEFLHI--NLHL 133 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVL 411 + AI TV + L FP+ + + + N+ P + L K + Sbjct: 134 PWWSAISCCTVIARFLIFPVVIRGQRNAVKLNNVMPTVQRLTNKMNEIRSSGSQLEIARA 193 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAA 467 + K H +NP+ L+Q P+F + K+ ++ +E W DL Sbjct: 194 TNELQMFMKKHGVNPMKNMLVPLVQAPIFISFFIGLRKMAALPVESMQTGGLYWFTDLTI 253 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSMFIQMKMSPPPADKGQAMILNWMPVV 526 ADP I P + + II + +Q +P + ++ +P V Sbjct: 254 ADPYYIM----------PAIATLSMLCIIELGGETGVQ---NPQMQN--MKTVMRILPFV 298 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQ 552 + +S PA + YW SN IS+ Q Sbjct: 299 ILPFTASMPASVFCYWLTSNFISLGQ 324 >gi|329121491|ref|ZP_08250115.1| ParB/SpoJ family partitioning protein [Dialister micraerophilus DSM 19965] gi|327469406|gb|EGF14876.1| ParB/SpoJ family partitioning protein [Dialister micraerophilus DSM 19965] Length = 266 Score = 113 bits (282), Expect = 8e-23, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 113/234 (48%), Gaps = 26/234 (11%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQY 383 F++ + ++A+ M + + Y + ++GIAI+ TV +K++ PLA KQ Sbjct: 3 DFQIPVLSTLVGYLAEIMRFCLQFCYGITQDLGYPSYGIAIIALTVIIKVILLPLAIKQI 62 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 S M+ +QP++ +++K+K + + +LY ++PL+GC P+L+Q+P AI Sbjct: 63 KSMKGMQEVQPQLAAIQKKYKNDK-MRQSQEIQRLYAEKGVSPLSGCLPLLIQMPFLIAI 121 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + + + + W++ LA DPT + P+I ++S +I Sbjct: 122 FYALQGFPYDPNHVSFLWLESLAVPDPTY-------------------VLPVISAVSTWI 162 Query: 504 QMKMSPPPADKGQAMILNWMPVV-FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 K + GQ ++ + + + FP+GL+IYW SN+ +QQ ++ Sbjct: 163 ISKQTSGANVAGQQKMMMMVMPLMIGYISVKFPSGLVIYWIVSNLFQGIQQTIM 216 >gi|167748061|ref|ZP_02420188.1| hypothetical protein ANACAC_02805 [Anaerostipes caccae DSM 14662] gi|317472414|ref|ZP_07931739.1| YidC/Oxa1 family membrane protein insertase [Anaerostipes sp. 3_2_56FAA] gi|167652053|gb|EDR96182.1| hypothetical protein ANACAC_02805 [Anaerostipes caccae DSM 14662] gi|316900134|gb|EFV22123.1| YidC/Oxa1 family membrane protein insertase [Anaerostipes sp. 3_2_56FAA] Length = 331 Score = 113 bits (282), Expect = 8e-23, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 103/246 (41%), Gaps = 22/246 (8%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + F ++ + N G+ I+L T+ KL+ FPL KQ S + QP++ + Sbjct: 21 WVFGEIMKWIYNGLSAVGIENLGLCIILFTLISKLIIFPLTIKQQRSMKINQVAQPEMMK 80 Query: 399 LREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 +++K++ Q Q+ M ++Y + +P GC L+Q P+ A+Y V+ Sbjct: 81 IQKKYRGKRDQASMMKQQEEMQKVYDKYGTSPTGGCATTLIQFPIIMALYYVVRN----- 135 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-IWPIIMSLSMFIQMKMSPPPAD 513 G+I ++ F L + + + I P++ + ++ + S D Sbjct: 136 ---LEGYIPNI--PKSAYEFVLGINIQNTPGFKLSIYLIIPLLSAFFQYLSARTSMADMD 190 Query: 514 K------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 ++ MP++ +F + P G+ IYW+ S V VQQ +I + + Sbjct: 191 SDNPAAGMSKNMMLMMPIMSLFMCITLPVGIGIYWTASAVFQWVQQILIN-NYYNHTNMQ 249 Query: 568 DRLRST 573 + + Sbjct: 250 KIIEKS 255 >gi|163931198|pdb|3BLC|A Chain A, Crystal Structure Of The Periplasmic Domain Of The Escherichia Coli Yidc gi|163931199|pdb|3BLC|B Chain B, Crystal Structure Of The Periplasmic Domain Of The Escherichia Coli Yidc Length = 330 Score = 113 bits (282), Expect = 8e-23, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 101/304 (33%), Gaps = 22/304 (7%) Query: 56 VLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 D A + +K L +IN +G + L Y +++S P L ++ Sbjct: 22 SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETS 79 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFER 170 + Y A+ N + + + +A F + Sbjct: 80 PQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPXTYTDAAGNTFTK 139 Query: 171 TISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVL 224 T L Y + V N + S G++ + T ++ F + A Sbjct: 140 TFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAY 199 Query: 225 GDKS--LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + I + N W+ +Y+A+ +IP + + + F + G+ Sbjct: 200 STPDAAYAAYAFDTIADNENLNISSKGGWVAXLQQYFATAWIPHNDGTNN--FYTANLGN 257 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 + + + + PG++ + L+ G + P ++ +D+GW +FI Sbjct: 258 GIAAIGYKSQPVLVQPGQTGAXNSTLWVGPEIQDK-----XAAVAPHLDLTVDYGWLWFI 312 Query: 343 AKPM 346 ++P+ Sbjct: 313 SQPL 316 >gi|332638155|ref|ZP_08417018.1| cell division protein [Weissella cibaria KACC 11862] Length = 277 Score = 113 bits (282), Expect = 8e-23, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 94/245 (38%), Gaps = 29/245 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 IA ++ N+G+ I++ T+ ++LL PL Q S M+ + P + Sbjct: 41 HGIIIANFSRSILGVSAWFGNNYGLGIIVFTLLIRLLILPLMVYQTRSMRKMQEVAPALK 100 Query: 398 ELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 ++ K+ + +Q LYK +NP A P+++Q+P+ A+Y I + ++ Sbjct: 101 AIQAKYPNRDTESMAAMQAEQSALYKEAGVNPFASLLPLIVQMPILIALYTAIRTTKQL- 159 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PP 511 + W + L D H+ I PI+ +L F + P Sbjct: 160 ETGTFLWAQ-LGQHD-------------------HLFILPILAALFTFASSYLVMLGQPE 199 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 + + MP++ + P+ L +YW SN + Q I + EI + Sbjct: 200 KNGMTTSMTYIMPIMIFIFAINVPSALSLYWVVSNAFQVAQTWTIQ--NPFEIRREREAK 257 Query: 572 STFSK 576 + Sbjct: 258 KQAER 262 >gi|15896967|ref|NP_350316.1| putative inner membrane protein translocase component YidC [Clostridium acetobutylicum ATCC 824] gi|38503142|sp|Q97CW0|OXAA_CLOAB RecName: Full=Membrane protein oxaA gi|15026843|gb|AAK81656.1|AE007868_12 Inner membrane protein, SpoIIIJ [Clostridium acetobutylicum ATCC 824] gi|325511144|gb|ADZ22780.1| putative inner membrane protein translocase component YidC [Clostridium acetobutylicum EA 2018] Length = 254 Score = 113 bits (282), Expect = 8e-23, Method: Composition-based stats. Identities = 59/237 (24%), Positives = 115/237 (48%), Gaps = 22/237 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + F + + + ++G+AI++ T+ +K L P + KQ S+ M +QP++ Sbjct: 11 FVQFFDSINKFVYNIVPDKNYSYGLAIIILTIIIKTLLVPFSIKQIKSSVLMNALQPELK 70 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+ K +S PQ LQ+ ++LYK N+NP GC +++Q P+ A+Y V SL ++ Sbjct: 71 KLQTK-LKSDPQKLQQETMKLYKEKNVNPFGGCLLLIIQYPILIALYYVFY-SLHIKGIG 128 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQ 516 + WI DL+ + +T + I PI+ + ++ ++ PP+ D Q Sbjct: 129 -FLWIHDLSQKATFSNWTTW--------------ILPIVSGATTYLSGILTMPPSSDPAQ 173 Query: 517 AM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + M + ++ +F A L++YW+ SN+ + Q +I+ A++ Sbjct: 174 RKQTTTMNIGMSIFLLWMSWNFSAALVLYWTVSNLFQMAQSKIIITAVTAKLEAEKN 230 >gi|159477094|ref|XP_001696646.1| inner membrane ALBINO3-like protein 1 [Chlamydomonas reinhardtii] gi|158282871|gb|EDP08623.1| inner membrane ALBINO3-like protein 1 [Chlamydomonas reinhardtii] gi|294845969|gb|ADF43128.1| ALB3p [Chlamydomonas reinhardtii] Length = 495 Score = 113 bits (282), Expect = 8e-23, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 21/230 (9%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ ++G +I+L T+ VKLL +PL K+Q S ++ ++P+ID ++++F + + +QK Sbjct: 136 HVPYSYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGEDKDK-IQKE 194 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRHAPFWGWIKDLAAADPTN 472 LY+ +NPLAGC P L IP+F ++ ++ + + ++ LA Sbjct: 195 TSVLYEQAGVNPLAGCLPTLATIPIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMA 254 Query: 473 IFTLFGILPFYLP------------GFMHVGIWPIIMSLSMFIQMKMSPPPADK------ 514 + + P P+++ + ++ PP D Sbjct: 255 MRQSGLGTSWLWPLGPDGAPPIGWEDAAAYLTLPLLLVAVQYASSSVTSPPIDPKDENAN 314 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q +L ++P++ + + PAGL +Y+ + V+S Q + K+ GA + Sbjct: 315 TQRALLVFLPLMVGWFSLNVPAGLSLYYLANTVLSSAIQIYLKKLGGANV 364 >gi|38502952|sp|Q83MN6|OXAA_TROWT RecName: Full=Membrane protein oxaA Length = 310 Score = 113 bits (282), Expect = 8e-23, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 34/264 (12%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + + ++ ++I+ + ++ P+ KQ + M I P++ ++ Sbjct: 25 VFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLIPVFLKQIRAQRKMLEIAPEVRRIQ 84 Query: 401 EKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS------ 450 EK+K Q + + M+++Y+ NPL+ C PI+LQ+PVFF +Y+VI + Sbjct: 85 EKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLPIVLQMPVFFGLYQVIESAQNAGTG 144 Query: 451 ---------LEMRHAPFWG--WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 ++ R + +G + D + D L F L + G+ IM Sbjct: 145 VGPLNGPLGMDFRDSRIFGVVPLHDSFSHDFY---ALQAGQAFNLITMIVAGVLTAIMIA 201 Query: 500 SMFIQM-KMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 K+ P K Q ++L +P++F+ SFP G++IYW+ SNV S Sbjct: 202 VQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFLGMGFSFPVGILIYWTASNVWS 261 Query: 550 IVQQAVIMKMHGAEIGLIDRLRST 573 VQQAV + + + L LR Sbjct: 262 AVQQAVAIYRNPSPGSLAFELRRK 285 >gi|38372242|sp|Q8S339|ALB31_CHLRE RecName: Full=Inner membrane ALBINO3-like protein 1, chloroplastic; Flags: Precursor gi|20136422|gb|AAM11662.1|AF492768_1 albino3-like protein [Chlamydomonas reinhardtii] Length = 495 Score = 113 bits (282), Expect = 8e-23, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 21/230 (9%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ ++G +I+L T+ VKLL +PL K+Q S ++ ++P+ID ++++F + + +QK Sbjct: 136 HVPYSYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGEDKDK-IQKE 194 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRHAPFWGWIKDLAAADPTN 472 LY+ +NPLAGC P L IP+F ++ ++ + + ++ LA Sbjct: 195 TSVLYEQAGVNPLAGCLPTLATIPIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMA 254 Query: 473 IFTLFGILPFYLP------------GFMHVGIWPIIMSLSMFIQMKMSPPPADK------ 514 + + P P+++ + ++ PP D Sbjct: 255 MRQSGLGTSWLWPLGPDGAPPIGWEDAAAYLTLPLLLVAVQYASSSVTSPPIDPKDENAN 314 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q +L ++P++ + + PAGL +Y+ + V+S Q + K+ GA + Sbjct: 315 TQRALLVFLPLMVGWFSLNVPAGLSLYYLANTVLSSAIQIYLKKLGGANV 364 >gi|237752890|ref|ZP_04583370.1| inner membrane protein oxaA [Helicobacter winghamensis ATCC BAA-430] gi|229375157|gb|EEO25248.1| inner membrane protein oxaA [Helicobacter winghamensis ATCC BAA-430] Length = 99 Score = 113 bits (282), Expect = 8e-23, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 20/106 (18%) Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQA 517 WI DL+ DP + PI+M +M++Q ++P D Q Sbjct: 1 MLWITDLSVMDPYF-------------------VLPILMGATMYLQQHLTPTAFNDPMQE 41 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 I ++P++F +FP+GL++YW +N+ SI+QQ +I K + Sbjct: 42 KIFKFLPLIFTIFFVTFPSGLVLYWFVNNIFSILQQLLINKSLERK 87 >gi|295101866|emb|CBK99411.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Faecalibacterium prausnitzii L2-6] Length = 361 Score = 113 bits (281), Expect = 9e-23, Method: Composition-based stats. Identities = 61/302 (20%), Positives = 120/302 (39%), Gaps = 59/302 (19%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 D Y + P+ +M + YNL+ N+G I++ T+ ++LL PL Q S A M Q Sbjct: 3 RDMNILYILGVPLGYVMEWIYNLIPNYGWDIIIFTIVIRLLSIPLQLNQQKSMAKMSAFQ 62 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE- 452 P I ++++K+K P+ Q+ +++L + P AGC P+L+ V F + +V+ L+ Sbjct: 63 PMIADIQKKYKD-KPEKQQEELMKLQQEFGYKPTAGCMPMLVNFLVMFGVIEVVYRPLQR 121 Query: 453 ------------------------------------MRHAPFWGWIKDLAAADPTNIFTL 476 + + D N T Sbjct: 122 IFHIGAEAITAAGDAMTALGISFTQVTRDTNIIAQVLAGESTV---TSVFTPDQLNTITE 178 Query: 477 FGILPFY-------------LPGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMI--- 519 FG + + + I+PI+ ++MFI +S + Q + Sbjct: 179 FGQHMDFFGIDLTRVPQYSLAADNLPLLIFPILAVVTMFISTHISMKASGQEMQGSMKLT 238 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 + MP+++VF + P +Y+ SN++ VQ +M+ + +++++ + Sbjct: 239 MYMMPLMYVFFCFTVPCAFSLYYVISNIVMTVQTQ-VMRKIYDPEKMKEQVKAEIASRRK 297 Query: 580 SQ 581 + Sbjct: 298 EE 299 >gi|323340870|ref|ZP_08081121.1| membrane protein [Lactobacillus ruminis ATCC 25644] gi|323091721|gb|EFZ34342.1| membrane protein [Lactobacillus ruminis ATCC 25644] Length = 300 Score = 113 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 91/262 (34%), Gaps = 34/262 (12%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + + L+ + G+ G AI+L T V+L+ P+ KQ + + Sbjct: 30 GKPYGFVYDHMAVPTQHFLVWLSNLMGGSLGWAIILLTFVVRLILMPVMLKQSRNATIQQ 89 Query: 391 N--------IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 + + + + + ++ LY+ + I+ GC P+L+Q+P+F Sbjct: 90 EKISHLKPLMDDIAKRQQAAQTDAEKMAISQELMSLYRDNGISMTGGIGCLPLLIQMPIF 149 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y I S E+ ++ I + + I Sbjct: 150 AALYAAIQYSPEL-SKSYFYGIN-------------------LGHSSIILTILSFAAYAL 189 Query: 501 MFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + P + Q ++ +M PV+ PAGL +Y+ V + +Q +I M Sbjct: 190 QGWISMLGMPKEQRKQMQMMMFMSPVMITVMTFVSPAGLGLYFFVGGVFACIQTLIINAM 249 Query: 560 HGAEIGLIDRLRSTFSKNYNSQ 581 + ++ K + Sbjct: 250 ---RPKIKQQIAEELKKTPPKK 268 >gi|294846010|gb|ADF43168.1| ALB3m [Chlamydomonas reinhardtii] Length = 493 Score = 113 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 21/230 (9%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ ++G +I+L T+ VKLL +PL K+Q S ++ ++P+ID ++++F + + +QK Sbjct: 134 HVPYSYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGEDKDK-IQKE 192 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--MRHAPFWGWIKDLAAADPTN 472 LY+ +NPLAGC P L IP+F ++ ++ + + ++ LA Sbjct: 193 TSVLYEQAGVNPLAGCLPTLATIPIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMA 252 Query: 473 IFTLFGILPFYLP------------GFMHVGIWPIIMSLSMFIQMKMSPPPADK------ 514 + + P P+++ + ++ PP D Sbjct: 253 MRQSGLGTSWLWPLGPDGAPPIGWEDAAAYLTLPLLLVAVQYASSSVTSPPIDPKDENAN 312 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q +L ++P++ + + PAGL +Y+ + V+S Q + K+ GA + Sbjct: 313 TQRALLVFLPLMVGWFSLNVPAGLSLYYLANTVLSSAIQIYLKKLGGANV 362 >gi|257127031|ref|YP_003165145.1| hypothetical protein Lebu_2303 [Leptotrichia buccalis C-1013-b] gi|257050970|gb|ACV40154.1| 60 kDa inner membrane insertion protein [Leptotrichia buccalis C-1013-b] Length = 228 Score = 113 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 63/222 (28%), Positives = 114/222 (51%), Gaps = 19/222 (8%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + + ++ +VGN+GIAI++ T ++++ FPL KQ S M+++QP++++++E Sbjct: 7 LVDFVVHVLKAINGVVGNYGIAIIIVTFLMRIIVFPLTLKQEKSMKKMRDLQPELEKIKE 66 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 K K +P Q LQ+ ++YK + +NPL GC P+L+Q+P+F A+Y A + W Sbjct: 67 KHKDNP-QELQRRTAEIYKENGVNPLGGCLPLLIQMPIFVALYYAFIGDAIPADA-KFLW 124 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-----DKGQ 516 L D + F + PI+ FIQ K+ ++ Sbjct: 125 FT-LKQPDRLFMLGKF-----------AFNLLPILNVGVTFIQQKIMTSATSGQETNQQM 172 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +L MP++ +F + P+G+ +Y+ S +S+VQQ I+K Sbjct: 173 QSMLYMMPLMMLFIFYNMPSGVTLYYLVSGALSLVQQYFILK 214 >gi|111020651|ref|YP_703623.1| putative inner membrane protein translocase component YidC [Rhodococcus jostii RHA1] gi|110820181|gb|ABG95465.1| probable membrane protein, OxaA family protein [Rhodococcus jostii RHA1] Length = 370 Score = 113 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 103/282 (36%), Gaps = 48/282 (17%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F G + K + + + ++++ ++ + + KQ +T Sbjct: 3 DFIYYPVSGILWVWHKVFGAIPFLGPDSGITWALSVVFLVFTLRAVLYKPFVKQVRTTRQ 62 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP+I L++K+ Q M +L K H NP+ GC P+L Q PVF ++ V+ Sbjct: 63 MQELQPQIKALQKKYSG-DRQRQAVEMQKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVLR 121 Query: 449 I--------------------------SLE---------MRHAPFWGWIKDLAAADPTNI 473 S+E + AP WI A + Sbjct: 122 SFNRTGTGIGQLGMSVEANANTPNYFFSVEDVQSFLSARLFGAPISAWITMPKAQ--LDA 179 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-----MSPPPADKGQAMILN-----WM 523 F +G +P L + II S++ + SP A Q+ I+N Sbjct: 180 FAAYGPIPTVLNIAVVAVPLMIIASIATHFNSRASVARQSPEAAANPQSAIMNKLALWIF 239 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+ + P +++YW +N+ + QQ ++ + E Sbjct: 240 PLGVLVGGPFLPIAILLYWVSNNIWTYGQQHIVFRRIDQEEE 281 >gi|296110738|ref|YP_003621119.1| cell division protein [Leuconostoc kimchii IMSNU 11154] gi|295832269|gb|ADG40150.1| cell division protein [Leuconostoc kimchii IMSNU 11154] Length = 279 Score = 113 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 29/250 (11%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 W +A ++ N+G+ I++ T+ ++ L PL Q S M+ + Sbjct: 38 ASHSFWSAVVAAFTSAILGASGWFGNNYGVGIIVFTILIRFLILPLMVYQIQSMMKMQIV 97 Query: 393 QPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 QP + L+ K+ Q++ LYK +NP A P+++Q+PV A+Y+ I Sbjct: 98 QPALKALQAKYPGKDTESRQLMMAEQQALYKDAGVNPFASMLPLIVQMPVLIALYQSIYN 157 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S ++ + + W++ L DP + PI+ +L F +S Sbjct: 158 SPVLK-SGKFLWLQ-LGNNDPYY-------------------VLPILAALFTFASSWLST 196 Query: 510 PPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + + PVV F+ + P+ L +YW N+ +Q + + ++ Sbjct: 197 QATPEQNAMTKAMPYIFPVVIFFSAMAVPSALSLYWVVGNLFQTIQTFALQ--NPFKLRR 254 Query: 567 IDRLRSTFSK 576 L++ + Sbjct: 255 QRELKAQKER 264 >gi|94993599|ref|YP_601697.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10750] gi|94547107|gb|ABF37153.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10750] Length = 275 Score = 113 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 27/212 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ EL++K+ Q Sbjct: 51 QWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTQTR 110 Query: 412 QK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 K LYK + +NP A P+L+Q+PV A+++ ++ ++ + W++ LA Sbjct: 111 MKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLK-TGTFLWVE-LAQH 168 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525 D H+ + P++ ++ F+ ++ A + +++ MP+ Sbjct: 169 D-------------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPL 209 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + F + +G+++YW+ SN +VQ ++ Sbjct: 210 MIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 241 >gi|19745380|ref|NP_606516.1| hypothetical protein spyM18_0229 [Streptococcus pyogenes MGAS8232] gi|71902868|ref|YP_279671.1| hypothetical protein M28_Spy0202 [Streptococcus pyogenes MGAS6180] gi|94987840|ref|YP_595941.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS9429] gi|94989717|ref|YP_597817.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10270] gi|94991720|ref|YP_599819.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS2096] gi|38503059|sp|Q8P2P8|OXAA1_STRP8 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|19747487|gb|AAL97015.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gi|71801963|gb|AAX71316.1| conserved hypothetical protein [Streptococcus pyogenes MGAS6180] gi|94541348|gb|ABF31397.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS9429] gi|94543225|gb|ABF33273.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10270] gi|94545228|gb|ABF35275.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS2096] Length = 275 Score = 113 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 27/212 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ EL++K+ Q Sbjct: 51 QWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTQTR 110 Query: 412 QK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 K LYK + +NP A P+L+Q+PV A+++ ++ ++ + W++ LA Sbjct: 111 MKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLK-TGTFLWVE-LAQH 168 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525 D H+ + P++ ++ F+ ++ A + +++ MP+ Sbjct: 169 D-------------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPL 209 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + F + +G+++YW+ SN +VQ ++ Sbjct: 210 MIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 241 >gi|322411167|gb|EFY02075.1| OxaA-like protein precursor [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 307 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 100/289 (34%), Gaps = 39/289 (13%) Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 N + + + W + + + + N +G+AI+ Sbjct: 6 NRILFSGLALSILFTLTGCVGRDAHGNPKGMIWEFLGKPMSYFIDYFANNAGLGYGLAII 65 Query: 366 LTTVFVKLLF--------FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 + T+ V+ L + + + +P +++ Q Q ++ Sbjct: 66 IVTIVVRTLILPLGLYQSWKASYQSEKMAFLKPVFEPINKRIKQASSQEEKMAAQTELMA 125 Query: 418 LYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT 475 + H INPL GC P+L+Q+P F A+Y + + + F G DL + Sbjct: 126 AQRAHGINPLGGIGCLPLLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR------- 176 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFAL 531 + I++ F Q +S + Q ++ MP++ + Sbjct: 177 --------------SLVLTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIVMS 222 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 S PAG+ +YW SI+QQ + + + L + ++KN Sbjct: 223 FSLPAGVGLYWLVGGFFSIIQQLITT--YILKPRLHKQFEEEYAKNPPK 269 >gi|50913585|ref|YP_059557.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10394] gi|73921525|sp|Q5XDY9|OXAA1_STRP6 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|50902659|gb|AAT86374.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10394] Length = 275 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 104/212 (49%), Gaps = 27/212 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ EL++K+ Q Sbjct: 51 QWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTQTR 110 Query: 412 QK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 K LYK + +NP A P+L+Q+PV A+++ ++ ++ + W++ LA Sbjct: 111 MKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLK-TGTFLWVE-LAQH 168 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525 D H+ + P++ ++ F+ ++ + +++ MP+ Sbjct: 169 D-------------------HLYLLPVLAAVFTFLSTWLTNLATKEKNVMMTVMIYVMPL 209 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + F + +G+++YW+ SN +VQ ++ Sbjct: 210 MIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 241 >gi|130491697|ref|NP_001076302.1| hypothetical protein LOC562963 [Danio rerio] gi|126631996|gb|AAI34231.1| Zgc:163091 protein [Danio rerio] Length = 469 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 94/295 (31%), Gaps = 42/295 (14%) Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGA-KEFPTIHHYEKDLAIPRFEMLI 334 D A + P + T + + + ++ + Sbjct: 94 SEPPDAAISAPASIPTPAVDPTPSVTPPITEQVAEAPLTALDVLQGVGAEASLSELGL-- 151 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + L+ + + +G I+ T+ + FP+ K A + N+ Sbjct: 152 ---CNSTPVGLIQNLLEFMHVSIGLPWWGAIVAGTIVARCAVFPVIVKGQREAAKLNNVM 208 Query: 394 PKIDELREKFKQSPPQVLQKAM-------IQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 P++ +L + ++ + + K ++NP G L+Q P+F + + Sbjct: 209 PEMTKLTNRMNEAKQSGNKFEFSKAYTDLMMFQKKKDVNPFRGFLVPLVQAPIFLSFFIA 268 Query: 447 ISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 + E+ W DL AADP I PI ++ +M Sbjct: 269 LRKMSELPVPSLQTGGLWWFTDLTAADPFY-------------------ILPIAVTGTMV 309 Query: 503 IQMKMSPPPA--DK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +++ + + MP V + +FP + YW SN+ S+ Q Sbjct: 310 AILELGAESGVDNPNLRAMKTVFRIMPFVILPLTINFPTAVFTYWMTSNLFSLAQ 364 >gi|15674429|ref|NP_268603.1| hypothetical protein SPy_0247 [Streptococcus pyogenes M1 GAS] gi|21909712|ref|NP_663980.1| hypothetical protein SpyM3_0176 [Streptococcus pyogenes MGAS315] gi|28895093|ref|NP_801443.1| hypothetical protein SPs0181 [Streptococcus pyogenes SSI-1] gi|54038807|sp|P65632|OXAA1_STRP3 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|54041695|sp|P65631|OXAA1_STRP1 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|13621523|gb|AAK33324.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|21903896|gb|AAM78783.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|28810338|dbj|BAC63276.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] Length = 275 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 104/212 (49%), Gaps = 27/212 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ EL+ K+ Q Sbjct: 51 QWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQRKYAGKDTQTR 110 Query: 412 QK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 K LYK + +NP A P+L+Q+PV A+++ ++ ++ + W++ LA Sbjct: 111 MKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLK-TGTFLWVE-LAQH 168 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525 D H+ + P++ ++ F+ ++ A + +++ MP+ Sbjct: 169 D-------------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPL 209 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + F + +G+++YW+ SN +VQ ++ Sbjct: 210 MIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 241 >gi|225570322|ref|ZP_03779347.1| hypothetical protein CLOHYLEM_06419 [Clostridium hylemonae DSM 15053] gi|225160854|gb|EEG73473.1| hypothetical protein CLOHYLEM_06419 [Clostridium hylemonae DSM 15053] Length = 356 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 116/282 (41%), Gaps = 31/282 (10%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF--------GIAIMLTTVFVKLLFFPLAKK 381 +W IA + +M++ Y ++ N G++I+ T+ V + PL K Sbjct: 6 LLTAANWPIVGQIAWLLGKVMNFIYTVLDNILPSDNGLIGLSIIFYTIIVYTIMLPLTVK 65 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQI 437 Q + + P+I +++K+K Q Q+ + Q+Y + + GC P+L+Q+ Sbjct: 66 QQKTAKMSSVMNPEIQAIQKKYKNKKDQASMMKQQEEVQQVYDKYGTSMTGGCLPLLIQM 125 Query: 438 PVFFAIYKVIS----ISLEMRHAPF----WGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 P+ FA+Y VI ++ A + I DL A I + Sbjct: 126 PLLFALYPVIYDMQRYVPAIKGAATSVNKFITIPDLTMAPIQMIKESGSFGIAPAVVIIT 185 Query: 490 VGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLI 539 + P++ L+ ++ +K+S P + MP+ VF + + +G+ Sbjct: 186 AILLPVLSGLTQYLSIKLSQNISGQQMDKDNPMAGTMKTMNMTMPIFSVFMVFTLSSGIG 245 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +YW S V+ VQQ +I K H ++ + D + K + Sbjct: 246 LYWIVSAVVRCVQQVLINK-HLSKTSVEDIIEKNKEKAAEKR 286 >gi|256827813|ref|YP_003151772.1| preprotein translocase subunit YidC [Cryptobacterium curtum DSM 15641] gi|256583956|gb|ACU95090.1| preprotein translocase subunit YidC [Cryptobacterium curtum DSM 15641] Length = 257 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 56/232 (24%), Positives = 117/232 (50%), Gaps = 2/232 (0%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +F +S+FY+ G++G+AI+ T+ +LL +PL +KQ S+ M+ +QP + Sbjct: 1 MWDAFKDFIFWCISFFYSFFGDWGMAIVTVTIIFRLLVYPLMQKQIKSSFQMQKVQPLLK 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E++ K+ Q +Q+ M ++Y NP+AGC PI LQ+P+F A+++V+ Sbjct: 61 EIQTKYAD-DQQRMQEEMQKIYAEAKFNPIAGCLPIFLQMPIFIALFQVLQEMTTRTQGS 119 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + + + + + ++P + + I+ M +Q + A K Q Sbjct: 120 TYQFYHLVPDLTLSPSSAFGQGVLTFIPYIILLLIFAGATFAPMILQQRGQADSAQKRQT 179 Query: 518 MILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 ++++ +M + +F + PAG++++W S++ + QQ + M++ E Sbjct: 180 IMMSGFMSLFMLFIGWTSPAGVLLFWGASSLFGVAQQQITMRVLKREDEAKQ 231 >gi|186503883|ref|NP_001118405.1| ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] gi|330253080|gb|AEC08174.1| inner membrane protein ALBINO3 [Arabidopsis thaliana] Length = 342 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 18/207 (8%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 ++ +G AI+L T+ VK +PL K+Q ST M+N+QPKI +++++ + + +Q Sbjct: 135 HVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGN-QERIQLE 193 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP--- 470 +LYK +NPLAGC P L IPV+ +Y+ +S + E + WI L Sbjct: 194 TSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIAA 253 Query: 471 ----TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM-- 518 + I LF G P + + P+++ S ++ M++ PP D Q Sbjct: 254 RQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTL 313 Query: 519 -ILNWMPVVFVFALSSFPAGLIIYWSW 544 + ++P++ + S P+GL IYW Sbjct: 314 LVFKFLPLMIGYFALSVPSGLSIYWLA 340 >gi|218291090|ref|ZP_03495113.1| 60 kDa inner membrane insertion protein [Alicyclobacillus acidocaldarius LAA1] gi|218238975|gb|EED06182.1| 60 kDa inner membrane insertion protein [Alicyclobacillus acidocaldarius LAA1] Length = 342 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 58/223 (26%), Positives = 110/223 (49%), Gaps = 24/223 (10%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + I + LM YF +L GN +GI+I+L + V+L+ PL +Q M +Q Sbjct: 37 PKNVWGSILHGISDLMDYFAHLFGNDYGISILLMAILVRLVVLPLFLRQIRFQRAMVKLQ 96 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P+I ++R K+ + Q +Q+ +++LY+ +NPLAGC+P+L+Q+P +A Y I ++ M Sbjct: 97 PEIQKIRTKY-KFDNQKMQEELMKLYQEAGMNPLAGCFPMLIQLPFLWAFYGAIVGNVGM 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + +F + + I P++ +LS + +S Sbjct: 156 RQ---------------STFLGIFPLGHWDTH-----YILPVLAALSTLLSSWLSMQS-Q 194 Query: 514 KGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 Q + ++ P++ F P GL++YW ++N++ +Q + Sbjct: 195 PVQQKSMLFVYPLMIFFFAFRLPGGLVLYWIYTNLLVALQVYL 237 >gi|28572956|ref|NP_789736.1| putative inner membrane protein translocase component YidC [Tropheryma whipplei TW08/27] gi|38502953|sp|Q83N53|OXAA_TROW8 RecName: Full=Membrane protein oxaA gi|28411089|emb|CAD67474.1| conserved integral membrane protein [Tropheryma whipplei TW08/27] Length = 310 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 34/264 (12%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + + ++ ++I+ + ++ P+ KQ + M I P++ ++ Sbjct: 25 VFFHTLLGFLGFGDKSGLSWALSIVGLVIVIRATLIPVFLKQIRAQRKMLEIAPEVRRIQ 84 Query: 401 EKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS------ 450 EK+K Q + + M+++Y+ NPL+ C PI+LQ+PVFF +Y+VI + Sbjct: 85 EKYKGKRDVLSRQSMNQEMMEIYRVRGANPLSSCLPIVLQMPVFFGLYQVIESAQNAGTG 144 Query: 451 ---------LEMRHAPFWG--WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 ++ R + +G + D + D L F L + G+ IM Sbjct: 145 VGPLNGPLGMDFRDSRIFGVVPLHDSFSHDFY---ALQAGQAFNLITMIVAGVLTAIMIA 201 Query: 500 SMFIQM-KMSP---------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 K+ P K Q ++L +P++F+ SFP G++IYW+ SNV S Sbjct: 202 VQLFTQLKVIPKNIPENAKNTSVYKNQKVMLYLLPIMFLGMGFSFPVGILIYWTASNVWS 261 Query: 550 IVQQAVIMKMHGAEIGLIDRLRST 573 VQQAV + + + L LR Sbjct: 262 GVQQAVAIYRNPSPGSLAFELRRK 285 >gi|332365878|gb|EGJ43635.1| stage III sporulation protein J [Streptococcus sanguinis SK355] Length = 271 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 29/232 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I L+EK+ + Sbjct: 46 RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + +LYK +NP A P+L+Q+PV A+++ ++ +E + W+ +L A Sbjct: 106 TALAEETQKLYKEMGVNPYASFIPLLIQMPVLLALFQALTR-VEFMKTGHFLWL-NLGAT 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525 DPT I P++ +L F +S + G +++ MPV Sbjct: 164 DPTF-------------------ILPLLAALFTFFSTWLSNKALPERNGGMTVMMYLMPV 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 V F +G+ +YW+ SN +VQ ++ + +I + + Sbjct: 205 VIFFFALYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254 >gi|262281818|ref|ZP_06059587.1| membrane protein oxaA 1 [Streptococcus sp. 2_1_36FAA] gi|262262272|gb|EEY80969.1| membrane protein oxaA 1 [Streptococcus sp. 2_1_36FAA] Length = 271 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 101/257 (39%), Gaps = 29/257 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ + F F + + GI I+L T+ ++ + P+ + Q S+ M+ Sbjct: 25 EVTSQSTDLWEKFVFFFAETIRFLSFNSSLGIGIILFTIVIRTVLLPVFQIQMNSSRKMQ 84 Query: 391 NIQPKIDELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP I L+ K+ + +LYK +NPLA P+ +Q+PV A+++ + Sbjct: 85 EAQPHIKALQAKYPGKDMESRNLLATETQKLYKELGVNPLASFIPLFIQMPVLLALFQAL 144 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + +E + W+ +LA DP I P++ +L F+ + Sbjct: 145 TR-VEFMKTGHFLWL-NLAEKDPYF-------------------ILPVLAALFTFLSSWL 183 Query: 508 SP---PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--KMHGA 562 + + ++ MP++ + SF +G+ +YW+ SN + Q V+ A Sbjct: 184 NNKGLAEKNGAMTVMTYLMPLLIFWFALSFSSGVALYWTVSNAYQVGQTLVLSNPFKMIA 243 Query: 563 EIGLIDRLRSTFSKNYN 579 E + Sbjct: 244 EREAKLNAAREQEEKKK 260 >gi|312866151|ref|ZP_07726372.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei F0415] gi|311098555|gb|EFQ56778.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei F0415] Length = 319 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 95/260 (36%), Gaps = 31/260 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 W ++ + NL +G +++ V V+LL PL Q S A Sbjct: 30 GKPTGTVWNLLGKPMSNLITYFAQNLGLGYGWGLVIVIVLVRLLILPLGLHQSRSAAYQA 89 Query: 391 --------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 +P +L+E Q Q ++Q + + I+ L GC P+L+Q P F Sbjct: 90 AKREHLAPIFEPINKKLKEATTQEEKMAAQTELMQANRDNGISMLGGMGCLPLLIQFPFF 149 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y + + + W +L D V I I+ + Sbjct: 150 SAMYWAARYTPGIL-KSNFLWF-NLGNRD-----------------IPIVAIIAILYLIQ 190 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ + P K M + P++ V S P+ ++IYW + SI+QQ + + Sbjct: 191 AWLGAQQMPEEQRKQAGMTMYMTPIIMVIFGFSQPSAVVIYWFVGGIFSIIQQLIAN--Y 248 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 + L ++ F KN Sbjct: 249 IFKPRLRKQVEEEFKKNPPK 268 >gi|241895504|ref|ZP_04782800.1| stage III sporulation protein J precursor [Weissella paramesenteroides ATCC 33313] gi|241871250|gb|EER75001.1| stage III sporulation protein J precursor [Weissella paramesenteroides ATCC 33313] Length = 277 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 98/269 (36%), Gaps = 27/269 (10%) Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374 + + + IA ++ N+GI I++ T+ ++LL Sbjct: 18 VALLIMIIAAVMYDGHVAGNGFWRGIIIANFSRSILGVSAWFGDNYGIGIIVFTLLIRLL 77 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCW 431 PL Q S M+ I P + +L+EK+ Q +Q QLYK +NP A Sbjct: 78 ILPLMVYQTGSMRKMQEIGPALKKLQEKYSSRDPETMQAMQAEQKQLYKDAGVNPFASFI 137 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 P+++Q+P+ A+Y I + ++ + W++ L DP Sbjct: 138 PLIVQMPILIALYTAIRTT-KLLETGTFFWVQ-LGDRDPYF------------------- 176 Query: 492 IWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I PI+ +L F + + + MP++ S P+ L +YW SN Sbjct: 177 ILPILAALFTFASSYLVMMGQPEKNGMTTSMTYIMPIMIFIFAISVPSALSLYWVISNAF 236 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 + Q I + + +K Sbjct: 237 QVAQTWTIQNPFEIRREREAKKEAERAKQ 265 >gi|257792846|ref|YP_003183452.1| 60 kDa inner membrane insertion protein [Eggerthella lenta DSM 2243] gi|317489239|ref|ZP_07947756.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp. 1_3_56FAA] gi|325832339|ref|ZP_08165338.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1] gi|257476743|gb|ACV57063.1| 60 kDa inner membrane insertion protein [Eggerthella lenta DSM 2243] gi|316911640|gb|EFV33232.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp. 1_3_56FAA] gi|325486175|gb|EGC88629.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1] Length = 261 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 10/231 (4%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +F ++ +FY+ G++G+AI++ TV ++L PL KQ S+ M+ +QP + Sbjct: 1 MWDVFKDWIFDIIHFFYDFCGDWGLAIIIVTVIFRILISPLMHKQTKSSFQMQKVQPLMQ 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 EL+ K+ P LQ+ M +LY NPLAGC P+LLQ+P+F A+++V+S R + Sbjct: 61 ELQRKYADDQP-RLQEEMQKLYAEVKFNPLAGCLPMLLQMPIFMALFQVLSEM-GSRTSG 118 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI----QMKMSPPPAD 513 +L P+ + L F+ I +I + + F+ + Sbjct: 119 TTYEFYNLV---PSLVMRPSEALAVGFGTFVPYLILMVIFAGATFLPMVLMQMGNKDNPQ 175 Query: 514 KGQAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + Q MI+ M V ++ S PAG++++W S+++ I QQ + M++ Sbjct: 176 RKQTMIMAAVMSVFMLWISWSSPAGVLLFWGASSLMGIAQQQISMRIMKKR 226 >gi|320547389|ref|ZP_08041678.1| membrane protein [Streptococcus equinus ATCC 9812] gi|320447985|gb|EFW88739.1| membrane protein [Streptococcus equinus ATCC 9812] Length = 305 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 83/235 (35%), Gaps = 35/235 (14%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL---- 411 + ++ + L + K + M ++P + E+ + + Q Sbjct: 60 FGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYLKPIFAPINERMRNAKTQEEKLAA 119 Query: 412 QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 Q ++ K + IN L GC P+L+Q+P F A+Y + + + Sbjct: 120 QTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAAQYTNGVAES------------- 166 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM----ILNWMPV 525 F + + + I+ F Q +S + Q + MP+ Sbjct: 167 ------TFLGIDLGTRSMLLTAVIAILY----FFQSWLSMQAVAEEQRAAMKGTMYVMPL 216 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 + VF S PA +++YW SI+QQ + M + L ++ F KN Sbjct: 217 MMVFFGMSMPASVLLYWLVGGFFSIIQQLITM--FIIKPKLRKQIAEEFEKNPPK 269 >gi|227514115|ref|ZP_03944164.1| inner membrane insertion protein [Lactobacillus fermentum ATCC 14931] gi|227087486|gb|EEI22798.1| inner membrane insertion protein [Lactobacillus fermentum ATCC 14931] Length = 277 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 102/235 (43%), Gaps = 27/235 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + + N+ G +G+ I++ T+ ++++ PL Q S + + P++ Sbjct: 36 IWDHYIVYNCSRFIIWLSNIFGGYGMGIIIFTIIIRIIILPLMFYQTKSMMKTQELAPQL 95 Query: 397 DELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + +Q+ +LYK +NP A P+L+Q+PV +A+Y+ I + ++ Sbjct: 96 KALQKKYSSKDRETMQQLQIEQQKLYKEAGVNPFASMLPLLIQLPVMWALYQAIWRTAQL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512 + + W++ L DP + PI+ ++ FI +S Sbjct: 156 K-TGTFLWLQ-LGHTDPYF-------------------VLPILAAVFTFISSWLSMASMP 194 Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + + MP++ F F A + +YW +N +VQ VI Sbjct: 195 EKNSMTTTMTWVMPIMIFFMALQFSAAITLYWVVTNAFQVVQTLVIQNPFKIRRE 249 >gi|290891476|ref|ZP_06554535.1| hypothetical protein AWRIB429_1925 [Oenococcus oeni AWRIB429] gi|290478918|gb|EFD87583.1| hypothetical protein AWRIB429_1925 [Oenococcus oeni AWRIB429] Length = 286 Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 100/249 (40%), Gaps = 29/249 (11%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 ++ ++G I++ T+ ++ L PL S+ NM + P + +++ Sbjct: 48 ITGFFANSILGVSKLCGNSYGFGIVIFTLLIRFLILPLMVYSISSSKNMAKVAPLVKKVQ 107 Query: 401 EKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 K+K LQ+ +YK +NP A P+L+Q+PV +A+++ +S + ++ Sbjct: 108 AKYKGKRDRDSMTKLQEETSSIYKEAGVNPYASLLPVLIQLPVLWALFQSVSSTPALKTG 167 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + W++ L + DP + PI+ +L FI MS K Q Sbjct: 168 S-FFWLQ-LGSPDPYF-------------------VLPILAALFTFISSWMSTASMGKDQ 206 Query: 517 ---AMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 A + P + +F+ + + L +YW +N +VQ + A + + Sbjct: 207 PGFAKAMPYIFPFIILFSALAVSSALSLYWVATNAFQVVQTFFLQNPFKARAEEKAKELA 266 Query: 573 TFSKNYNSQ 581 + + Sbjct: 267 ELERKKAIK 275 >gi|116630436|ref|YP_819589.1| preprotein translocase subunit YidC [Lactobacillus gasseri ATCC 33323] gi|238853336|ref|ZP_04643716.1| membrane protein OxaA 1 [Lactobacillus gasseri 202-4] gi|311111578|ref|ZP_07712975.1| membrane protein OxaA 1 [Lactobacillus gasseri MV-22] gi|116096018|gb|ABJ61170.1| Preprotein translocase subunit YidC [Lactobacillus gasseri ATCC 33323] gi|238834024|gb|EEQ26281.1| membrane protein OxaA 1 [Lactobacillus gasseri 202-4] gi|311066732|gb|EFQ47072.1| membrane protein OxaA 1 [Lactobacillus gasseri MV-22] Length = 291 Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 113/269 (42%), Gaps = 21/269 (7%) Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 + A P +W Y + ++ + ++G AI++ Sbjct: 19 MLTLALVVTGCASTNGSSVAPISHTSGNWWDRYIVYYISQFILWIASLVRDSYGWAIIIF 78 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNI 424 T+ V+++ PL S A + +QP++D LR+K+ Q LQ+ +LYK I Sbjct: 79 TIIVRIILLPLNAISIKSMAKQQKVQPQMDALRKKYPGKDVESRQKLQEETSKLYKEAGI 138 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NP GC P+L+Q+PV +A+Y+ I + ++ + W+ DL DP I P Sbjct: 139 NPYTGCLPMLIQLPVMYALYQAIWRTPQL-QNGRFLWM-DLGRPDPYYIM------PVLA 190 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWS 543 F + S +I +P + G + + MP++ + + + +YW Sbjct: 191 AAFTFI---------STYISQMSTPQSSQNGMTKGMTYLMPLIIGVSAIGIQSAISLYWV 241 Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 SN+ +VQ ++ + L ++ ++ Sbjct: 242 ISNLFQVVQTFILQNPFKYQRELEEQKKA 270 >gi|145346453|ref|XP_001417701.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] gi|144577929|gb|ABO95994.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] Length = 264 Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 65/215 (30%), Positives = 116/215 (53%), Gaps = 17/215 (7%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI++ T+ VK + +PL + Q VS+ NMKN+QP+I +REK++ + + K + ++Y+ + Sbjct: 49 AIIIVTILVKFVTYPLTRDQVVSSLNMKNLQPQIAAIREKYED-DQERMNKEINRVYEEN 107 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NPLAGC P LL PV +Y+ + + + A W + A PT+ L +LP Sbjct: 108 GVNPLAGCGPALLTFPVLAGLYRAFNNA-GIDGAFDEAWFFLPSLAGPTDARDLSWLLPL 166 Query: 483 YLPGFMHVG--------IWPIIMSLSMFIQMKMSPP----PADKG--QAMILNWMPVVFV 528 +G I+P++ ++S F+ M++ P D+ Q+++L +P+ Sbjct: 167 DSDYAPPIGWEEASLYLIFPVLTTISQFVSMEVLKPEETEKTDEMKNQSVLLKLLPLFIG 226 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + PAGL +YW W+NV + Q + + GA+ Sbjct: 227 YISLTVPAGLALYWFWNNVFTTGIQVFL-RNGGAK 260 >gi|184156317|ref|YP_001844657.1| hypothetical protein LAF_1841 [Lactobacillus fermentum IFO 3956] gi|183227661|dbj|BAG28177.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] gi|299783733|gb|ADJ41731.1| Putative uncharacterized protein [Lactobacillus fermentum CECT 5716] Length = 277 Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 102/235 (43%), Gaps = 27/235 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + + N+ G +G+ I++ T+ ++++ P+ Q S + + P++ Sbjct: 36 IWDHYIVYNCSRFIIWLSNIFGGYGMGIIIFTIIIRIIILPMMFYQTKSMMKTQELAPQL 95 Query: 397 DELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + +Q+ +LYK +NP A P+L+Q+PV +A+Y+ I + ++ Sbjct: 96 KALQKKYSSKDRETMQQLQIEQQKLYKEAGVNPFASMLPLLIQLPVMWALYQAIWRTAQL 155 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512 + + W++ L DP + PI+ ++ FI +S Sbjct: 156 K-TGTFLWLQ-LGHTDPYF-------------------VLPILAAVFTFISSWLSMASMP 194 Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + + MP++ F F A + +YW +N +VQ VI Sbjct: 195 EKNSMTTTMTWVMPIMIFFMALQFSAAITLYWVVTNAFQVVQTLVIQNPFKIRRE 249 >gi|170052227|ref|XP_001862125.1| inner membrane protein oxa1-1, mitochondrial [Culex quinquefasciatus] gi|167873150|gb|EDS36533.1| inner membrane protein oxa1-1, mitochondrial [Culex quinquefasciatus] Length = 419 Score = 112 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 98/263 (37%), Gaps = 49/263 (18%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + + + +L + I + TV V++L FPL + A M N P++ L+ Sbjct: 121 MVQNCMEFLHITADL--PWWGCIAIGTVCVRMLLFPLVIASQRNAAKMNNNMPQMQVLQM 178 Query: 402 KFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISIS 450 K ++ + M+Q K ++NPL L Q P+F + ++ ++ Sbjct: 179 KMTEARQAGNAIDSARYAQEMVQFMKEKDLNPLKNMLVPLAQAPIFISFFMGLRQMANVP 238 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP- 509 ++ W DL D PII S++MF+ +++ Sbjct: 239 VDSLREGGLFWFPDLTICDQFY-------------------ALPIITSITMFLTIELGTD 279 Query: 510 ---PPADKGQ--AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ-----------Q 553 A Q +L MP+ + +FP + +YW +SN S+VQ Sbjct: 280 SARMSAANMQTVRYVLRAMPLFILPFTINFPGAICLYWVFSNFFSLVQVGFLRIPAVRDY 339 Query: 554 AVIMKMHGAEIGLIDRLRSTFSK 576 I ++ + + + F++ Sbjct: 340 FKIDRLITHKPETLPIKKKKFAE 362 >gi|118587491|ref|ZP_01544916.1| conserved hypothetical protein [Oenococcus oeni ATCC BAA-1163] gi|118432141|gb|EAV38882.1| conserved hypothetical protein [Oenococcus oeni ATCC BAA-1163] Length = 286 Score = 112 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 99/249 (39%), Gaps = 29/249 (11%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 ++ ++G I++ T+ ++ L PL S+ NM + P + +++ Sbjct: 48 ITGFFANSILGVSKLCGNSYGFGIVIFTLLIRFLILPLMVYSISSSKNMAKVAPLVKKVQ 107 Query: 401 EKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 K+K LQ+ +YK +NP A P+L+Q+PV +A+++ +S + ++ Sbjct: 108 AKYKGKRDRDSMTKLQEETSSIYKEAGVNPYASLLPVLIQLPVLWALFQSVSSTPALKTG 167 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + W + L + DP + PI+ +L FI MS K Q Sbjct: 168 S-FFWFQ-LGSPDPYF-------------------VLPILAALFTFISSWMSTASMGKDQ 206 Query: 517 ---AMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 A + P + +F+ + + L +YW +N +VQ + A + + Sbjct: 207 PGFAKAMPYIFPFIILFSALAVSSALSLYWVATNAFQVVQTFFLQNPFKARAEEKAKELA 266 Query: 573 TFSKNYNSQ 581 + + Sbjct: 267 ELERKKAIK 275 >gi|217077890|ref|YP_002335608.1| inner membrane protein OxaA [Thermosipho africanus TCF52B] gi|217037745|gb|ACJ76267.1| inner membrane protein OxaA [Thermosipho africanus TCF52B] Length = 434 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 64/303 (21%), Positives = 120/303 (39%), Gaps = 26/303 (8%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + + S G KF+ N + K ++ G + I D Sbjct: 139 DDRLRNNIFLSFYSKGDIISIIKFNGNTLGGNSVKGSNLRFLVYIGPYKKTLIKSAFSDD 198 Query: 326 AIPRFEMLIDW----GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 EML GWF FI P+ + + NFG+ I++ T+ V+ + +PL Sbjct: 199 YDLISEMLKTVSGVGGWFDFILYPLVYFFGWINDFTRNFGLTIIVFTIIVRFVLYPLYHS 258 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Q S M+ +QP ++++++K+K Q Q+ +++ Y+ + INP +GC +Q+P+F Sbjct: 259 QTKSMIKMRKLQPIVEQIKKKYKDP--QKQQQELLKAYRENKINPASGCLMAFVQLPIFI 316 Query: 442 AIYKVISISLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y+VI E + + + DL A ++ + G+ I Sbjct: 317 ILYQVIRYYQEEFAFSGRFLFWNDLTAG--GFSANWIFLVIQIVAGYYLALI-------- 366 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 D A M +F F P+G+ +Y++ + +I + I K + Sbjct: 367 ---------TSQDSRTAWQSIIMSFIFPFLFIGLPSGVFLYYTANTLIQLGITYYIYKRY 417 Query: 561 GAE 563 + Sbjct: 418 KIK 420 >gi|222152571|ref|YP_002561746.1| OxaA-like protein [Streptococcus uberis 0140J] gi|222113382|emb|CAR41025.1| membrane protein OxaA 2 precursor [Streptococcus uberis 0140J] Length = 307 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 71/208 (34%), Gaps = 23/208 (11%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + + + P +++ Q Q ++ + + IN L GC P Sbjct: 83 SWKASYQSEKMAFLKPIFDPINQKMKNATTQEEKLAAQTELMAAQRENGINMLGGMGCLP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+Q+P F A+Y + + F + + GI Sbjct: 143 LLIQMPFFSAMYFAALHT-------------------KGISTSTFMGIDLGSRSLVLTGI 183 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ ++ M+ ++ MP++ +F S PAG+ +YW SI+Q Sbjct: 184 IAVLYYFQSWLSMQAVAEEQRAQMKTMMYTMPIMMIFMTLSLPAGVGLYWLVGGFFSIIQ 243 Query: 553 QAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 Q + + + L ++ F N Sbjct: 244 QLITT--YVLKPKLRQQIEEEFKNNPPK 269 >gi|229824628|ref|ZP_04450697.1| hypothetical protein GCWU000282_01975 [Catonella morbi ATCC 51271] gi|229785999|gb|EEP22113.1| hypothetical protein GCWU000282_01975 [Catonella morbi ATCC 51271] Length = 266 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 29/225 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y I ++ L G++G+ I+L T+ + + PL K Q S M IQP+I+EL Sbjct: 33 YIIYPLSQFIIWLSNLLGGSYGLGIILFTIIILVALTPLTKMQMDSQFQMAEIQPEIEEL 92 Query: 400 REKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +++F + LQ+A L K +N AGC P+L+Q+PV FA+Y+VI+ + +R Sbjct: 93 KKQFPNRDRASMEALQQAQQDLMKERGVNQFAGCLPLLIQLPVMFALYQVITRTEVLRD- 151 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + W+ L ADP I PI+ ++ + ++ A+ Q Sbjct: 152 GHFLWLA-LGKADPYF-------------------ILPILAAVLTWYSSYLT-VKANPIQ 190 Query: 517 ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + P + + +FPA + +YW SN + +VQ + Sbjct: 191 NGASKAMTYVAPAMILLVSFNFPAAVTLYWVVSNAVRVVQTFIFY 235 >gi|15674505|ref|NP_268679.1| OxaA-like protein [Streptococcus pyogenes M1 GAS] gi|71910109|ref|YP_281659.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS5005] gi|38503157|sp|Q9A1C3|OXAA2_STRP1 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|13621607|gb|AAK33400.1| hypothetical protein SPy_0351 [Streptococcus pyogenes M1 GAS] gi|71852891|gb|AAZ50914.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS5005] Length = 307 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 31/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + + + +P +++ Q Q ++ + H INPL GC P Sbjct: 83 SWKASYQSEKMAFLKPVFEPINKRIKQANSQEEKMAAQTELMAAQRAHGINPLGGIGCLP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+Q+P F A+Y + + + F G DL + + Sbjct: 143 LLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR---------------------SLV 179 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I++ F Q +S + Q ++ MP++ +F S PAG+ +YW Sbjct: 180 LTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFF 239 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 SI+QQ + + + L +++ ++KN Sbjct: 240 SIIQQLITT--YLLKPRLHKQIKEEYAKNPPK 269 >gi|308803795|ref|XP_003079210.1| chloroplast membrane protein (ISS) [Ostreococcus tauri] gi|116057665|emb|CAL53868.1| chloroplast membrane protein (ISS) [Ostreococcus tauri] Length = 453 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 115/214 (53%), Gaps = 17/214 (7%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI++ T+ VK++ +PL K Q VS+ NMKN+QP+I +REK++ + + K + ++Y+ + Sbjct: 91 AIIIVTILVKMVTYPLTKDQVVSSLNMKNLQPQIAAIREKYED-DQERMNKEINRVYEEN 149 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NPLAGC P LL PV +Y+ + + + A W + A PT+ L +LP Sbjct: 150 GVNPLAGCGPALLSFPVLAGLYRAFNNA-GIDGAFDEPWFFLPSLAGPTDARDLSWLLPL 208 Query: 483 YLPGFMHVG--------IWPIIMSLSMFIQMKMSPPPAD------KGQAMILNWMPVVFV 528 +G ++PI+ +LS F+ M++ P D + Q+++L +P Sbjct: 209 DADLAPPIGWDDASLYLLFPIMTTLSQFVSMEVLKPEEDEKTKEMQNQSVLLKLLPFFIG 268 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + + PAGL +YW W+NV + Q + + GA Sbjct: 269 YISLTVPAGLALYWFWNNVFTTGIQVYL-RNGGA 301 >gi|255527590|ref|ZP_05394454.1| 60 kDa inner membrane insertion protein [Clostridium carboxidivorans P7] gi|296186788|ref|ZP_06855189.1| stage III sporulation protein J family protein [Clostridium carboxidivorans P7] gi|255508723|gb|EET85099.1| 60 kDa inner membrane insertion protein [Clostridium carboxidivorans P7] gi|296048502|gb|EFG87935.1| stage III sporulation protein J family protein [Clostridium carboxidivorans P7] Length = 219 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 27/235 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + F + N ++GIAI+L T+ ++++ PL KQ S+ M +QP+ Sbjct: 8 FVQFFELVHHGVAGVIPNKNISYGIAIILVTLIIRIILLPLNIKQTKSSLVMSELQPETK 67 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +++EK+K PQ Q+ M++LYK +PL+GC P+L+Q P+F A+Y V + + Sbjct: 68 KIQEKYKN-DPQRAQQEMMKLYKEKGASPLSGCLPMLIQWPIFIALYYVFNNLHGIDGV- 125 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DL D I+ L+ + + D QA Sbjct: 126 HFLWISDLGKRDIF---------------------LAILSGLTTYFSGSLMMMSGDSAQA 164 Query: 518 M----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 + M + VF S + L++YW +N I I Q V+ K+ + + Sbjct: 165 KQSTTMNVGMSIFMVFISWSLKSALVLYWVVNNSIQIAQTLVMKKVDKNKGNIKA 219 >gi|139473067|ref|YP_001127782.1| membrane protein OxaA 1 precursor [Streptococcus pyogenes str. Manfredo] gi|306828048|ref|ZP_07461313.1| stage III sporulation protein J [Streptococcus pyogenes ATCC 10782] gi|134271313|emb|CAM29531.1| membrane protein OxaA 1 precursor [Streptococcus pyogenes str. Manfredo] gi|304429764|gb|EFM32808.1| stage III sporulation protein J [Streptococcus pyogenes ATCC 10782] Length = 269 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 27/212 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ EL++K+ Q Sbjct: 45 QWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQKKYAGKDTQTR 104 Query: 412 QK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 K LYK + +NP A P+L+Q+PV A+++ ++ ++ + W++ LA Sbjct: 105 MKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLK-TGTFLWVE-LAQH 162 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525 D H+ + P++ ++ F+ ++ A + +++ MP+ Sbjct: 163 D-------------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPL 203 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + F + +G+++YW+ SN +VQ ++ Sbjct: 204 MIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 235 >gi|225707022|gb|ACO09357.1| Inner membrane protein OXA1L, mitochondrial precursor [Osmerus mordax] Length = 421 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 109/313 (34%), Gaps = 57/313 (18%) Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 + + + A +H ++++ + G + ML + +L Sbjct: 66 TQPISESLVEAAPTALDVLHGPGAEVSLAELGL----GCSTPVGLVQNMLEFFHVDLGVP 121 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-- 417 + AI++ TV ++L FP+ K A + N+ P++ +L K ++ + + Sbjct: 122 WWGAIVIGTVLARMLVFPVIVKGQREAAKLNNVMPEMTKLTSKMNEAKQSGNKFDFAKAY 181 Query: 418 -----LYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468 K H++NPL G L Q PVF A+ K+ + W DL AA Sbjct: 182 ADLTMFQKKHDVNPLRGFLVPLAQTPVFISFFIALRKMSYHPVPSMQTGGLFWFTDLTAA 241 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMI---LNWM 523 DP I P+ ++ +MF +++ + + M Sbjct: 242 DPYF-------------------ILPLAVTGTMFFILELGAESGIDNPNMRAMKTVFRIM 282 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK------------------MHGAEIG 565 P + + +FP + YW SN S+ Q A++ + G Sbjct: 283 PFIILPLTINFPTAVFTYWLTSNCFSLGQVALLKHPLVRQKLRIPEKIIHPPSSMPPQDG 342 Query: 566 LIDRLRSTFSKNY 578 L D ++ + Sbjct: 343 LFDGIKKGWKNAQ 355 >gi|28209867|ref|NP_780811.1| putative inner membrane protein translocase component YidC [Clostridium tetani E88] gi|38502981|sp|Q899S4|OXAA_CLOTE RecName: Full=Membrane protein oxaA gi|28202302|gb|AAO34748.1| conserved membrane protein [Clostridium tetani E88] Length = 220 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 27/224 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F + S N ++G+AI+ T+ +KL+ PL K ST + IQP+I + Sbjct: 9 VEFFVIIHKFISSIITNPNYSYGVAIIFVTLIIKLILLPLNIKSMRSTIRINEIQPEIQK 68 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +++K+K PQ LQ+ ++LYK +NINP C P+LLQ P+ A+Y V + + Sbjct: 69 IQKKYKN-DPQRLQQEQMKLYKEYNINPFGSCLPLLLQWPILIALYYVFNNIQGISGVS- 126 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W+KDLA+ D + ++ + + + P D QA Sbjct: 127 FLWVKDLASPD---------------------IVLAVLAGATQYYSGLLMNPKGDNTQAK 165 Query: 519 ----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + M ++ +F S A L+IYW N+I + Q + K Sbjct: 166 TASNMNLSMSIMMIFISSRLKAALVIYWVTGNLIQMGQTILTKK 209 >gi|319938685|ref|ZP_08013049.1| membrane protein oxaA 2 [Streptococcus anginosus 1_2_62CV] gi|319811735|gb|EFW08001.1| membrane protein oxaA 2 [Streptococcus anginosus 1_2_62CV] Length = 305 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 102/264 (38%), Gaps = 39/264 (14%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF----PLAKKQYVST 386 + W + + N+ FG+AI++ T+ V+L+ + K + Sbjct: 29 GKPAGFVWDIIGRPMSLAIQYFANNMGLGFGVAIIIVTLIVRLIILPLGLYQSWKATYQS 88 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPL--AGCWPILLQIPVF 440 M ++P + ++E+ K + Q + A Q K + +N L GC P+L+Q+P F Sbjct: 89 EKMNYLKPIFEPIQERMKNAETQEEKLAAQQALMAAQKENGVNMLGGIGCLPLLIQLPFF 148 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y + + + +F +P + II+ + Sbjct: 149 SALYFSAQYTEGVAKS-------------------VFLGIPLGKASIL----LTIIVGIL 185 Query: 501 MFIQMKMSPPPADKGQA----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 FIQ ++ D+ Q ++ P++ V + PAG+ +YW I I+QQ +I Sbjct: 186 YFIQSALTLVGVDEVQKEQMKKMMYMSPLMIVIFSFTAPAGVTLYWVVGGFIMIIQQLII 245 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580 H L R+ + N Sbjct: 246 N--HYIRPQLRKRVAEEYKNNPPK 267 >gi|71910022|ref|YP_281572.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS5005] gi|71852804|gb|AAZ50827.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS5005] Length = 269 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 104/212 (49%), Gaps = 27/212 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + G+ G+ I+L T+ ++L+ PL Q S+ M++IQP++ EL+ K+ Q Sbjct: 45 QWLSFDGSIGVGIILFTLTIRLMLMPLFNMQIKSSQKMQDIQPELRELQRKYAGKDTQTR 104 Query: 412 QK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 K LYK + +NP A P+L+Q+PV A+++ ++ ++ + W++ LA Sbjct: 105 MKLAEESQALYKKYGVNPYASLLPLLIQMPVMIALFQALTRVSFLK-TGTFLWVE-LAQH 162 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPV 525 D H+ + P++ ++ F+ ++ A + +++ MP+ Sbjct: 163 D-------------------HLYLLPVLAAVFTFLSTWLTNLAAKEKNVMMTVMIYVMPL 203 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + F + +G+++YW+ SN +VQ ++ Sbjct: 204 MIFFMGFNLASGVVLYWTVSNAFQVVQLLLLN 235 >gi|329117329|ref|ZP_08246046.1| putative stage III sporulation protein J [Streptococcus parauberis NCFD 2020] gi|326907734|gb|EGE54648.1| putative stage III sporulation protein J [Streptococcus parauberis NCFD 2020] Length = 270 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 27/212 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---P 408 + + G+ G+ I+L T+ +++L PL Q S+ M+++QP++ EL+ K+ Sbjct: 45 QWLSFNGSIGVGIILFTLIIRILLMPLFNIQIKSSQRMQDLQPELKELQTKYAGKDTESR 104 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + LYK + +NP A +P+L+Q+PV A+++ +S +R + WI+ LA A Sbjct: 105 MALAEESQALYKRNGVNPYASIFPLLIQMPVMIALFQALSRVPFLREGS-FLWIE-LAKA 162 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNW-MPV 525 DP I PI+ +L F+ ++ ++ + MP+ Sbjct: 163 DPYF-------------------ILPILAALFTFLSTWLTNLAAKEKNMVMTMMTYAMPL 203 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + F S +G+++YW+ SN + Q ++ Sbjct: 204 MIFFMGISLASGVVLYWTVSNAFQVFQLLLLN 235 >gi|167766868|ref|ZP_02438921.1| hypothetical protein CLOSS21_01385 [Clostridium sp. SS2/1] gi|167711416|gb|EDS21995.1| hypothetical protein CLOSS21_01385 [Clostridium sp. SS2/1] gi|291558407|emb|CBL37207.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [butyrate-producing bacterium SSC/2] Length = 333 Score = 111 bits (276), Expect = 4e-22, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 103/269 (38%), Gaps = 21/269 (7%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + + F +I + ++ ++ N G+ I+L T+ KL+ Sbjct: 2 MLLAQAQQSTGNGGILAPFVIIFGWIIRAIYDGLAAMGIY--NVGLCIILFTLVSKLILL 59 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWP 432 P+ KQ S +++QP+I+++ +K++ Q Q+ M ++Y + +P GC P Sbjct: 60 PVTMKQQRSMKINQHMQPEINKITKKYRNKRDQASMMKQQEEMQKVYAKYGSSPTGGCLP 119 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 L+Q P+ A+Y VI R + N+F + + I Sbjct: 120 TLIQFPIIMALYYVI------RGVNTYIPQIARDVQFKPNLFLGMDLNSAPGFRLTPLLI 173 Query: 493 WPIIMSLSMFIQMKMSPPPADK--------GQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 P++ + F+ K S ++ MP++ S P G+ +YWS Sbjct: 174 IPVLSFIFQFLSAKTSMSTTQMDDSTPGAGMTKSMMYTMPLMSFVMCISLPIGIGLYWSA 233 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRST 573 S + +QQ H + + + Sbjct: 234 SALFQYIQQVAFN-YHYDHADMDKIIEKS 261 >gi|331701545|ref|YP_004398504.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus buchneri NRRL B-30929] gi|329128888|gb|AEB73441.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus buchneri NRRL B-30929] Length = 343 Score = 111 bits (276), Expect = 4e-22, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 100/255 (39%), Gaps = 40/255 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + ++A+P +M + VG++G AI++ TV V+L P+ +Q ++ + I Sbjct: 37 YDYLARPAQAIMEWIAQFVGSYGWAIIVLTVVVRLFLLPIMVRQMKASTIQQEKMQLIRP 96 Query: 399 LREKFKQS--------PPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVIS 448 + ++ +AM+ LYK + I+ GC P+L+Q+P+F A+Y I Sbjct: 97 QMAELQKRQKAASTPEEQTAASQAMMALYKQNGISMTGGIGCLPLLIQMPIFTALYAAIR 156 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S E+ H T+F + ++ ++ S +Q ++ Sbjct: 157 YSPELSH-------------------TVFMGIRLGQSSWL----LAVLSFASYLLQGYIA 193 Query: 509 PPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q ++ P++ + S PAGL IY+ + + +Q +I Sbjct: 194 MLGTPAAQKKQMGAMMLLSPIMILVFTLSAPAGLGIYFFIGGLFACLQTLIIN---MYRP 250 Query: 565 GLIDRLRSTFSKNYN 579 + R+ Sbjct: 251 RIRKRIAKENEGKKA 265 >gi|21909792|ref|NP_664060.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS315] gi|28896515|ref|NP_802865.1| OxaA-like protein precursor [Streptococcus pyogenes SSI-1] gi|209558852|ref|YP_002285324.1| OxaA-like protein precursor [Streptococcus pyogenes NZ131] gi|38503041|sp|Q8K8J2|OXAA2_STRP3 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|21903977|gb|AAM78863.1| putative SpoIIIJ family protein [Streptococcus pyogenes MGAS315] gi|28811769|dbj|BAC64698.1| hypothetical protein [Streptococcus pyogenes SSI-1] gi|209540053|gb|ACI60629.1| Membrane protein oxaA 2 precursor [Streptococcus pyogenes NZ131] Length = 307 Score = 111 bits (276), Expect = 4e-22, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 31/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + + + +P +++ Q Q ++ + H INPL GC P Sbjct: 83 SWKASYQSEKMAFLKPVFEPINKRIKQANSQEEKMAAQTELMAAQRAHGINPLGGIGCLP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+Q+P F A+Y + + + F G DL + + Sbjct: 143 LLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR---------------------SLV 179 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I++ F Q +S + Q ++ MP++ +F S PAG+ +YW Sbjct: 180 LTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFF 239 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 SI+QQ + + + L +++ ++KN Sbjct: 240 SIIQQLITT--YLLKPRLHKQIKEEYAKNPPK 269 >gi|148274159|ref|YP_001223720.1| putative inner membrane protein translocase component YidC [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147832089|emb|CAN03062.1| unnamed protein product [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 320 Score = 111 bits (276), Expect = 4e-22, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 108/251 (43%), Gaps = 28/251 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 ++ + + + ++I+ + V+ P+ +Q + M + P++ Sbjct: 16 ELILVGFHTLWTTLGLDPDNGATWVLSIVGLVLVVRAALIPIFVRQIKNQRRMMEVAPQL 75 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS-- 450 ++++K+K Q + + + LYK NPL+ C P+LLQ+P+FF++Y V+ + Sbjct: 76 KKIQDKYKGKRDQFSREAMSRETMALYKDTGTNPLSSCLPLLLQMPIFFSLYSVLHRAAV 135 Query: 451 -----LEMRHA---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 + + +A +G L A + I T G + + I+MS S F Sbjct: 136 EELPGIGLLNAQLSRSFGESSFLGAPLQSAISTANG----NVTVIVIATTMVILMSASQF 191 Query: 503 IQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 I P K Q ++L +P+VF + +FP G++ YW SN ++ Q Sbjct: 192 ITQLQIMAKNMSEETKASPMFKQQRILLYILPLVFAVSGIAFPLGVMFYWLVSNFWTMGQ 251 Query: 553 QAVIMKMHGAE 563 Q ++++ Sbjct: 252 QFLVIRNMPTP 262 >gi|71902952|ref|YP_279755.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS6180] gi|71802047|gb|AAX71400.1| inner membrane protein [Streptococcus pyogenes MGAS6180] Length = 307 Score = 111 bits (276), Expect = 4e-22, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 31/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + + + +P +++ Q Q ++ + H INPL GC P Sbjct: 83 SWKASYQSEKMAFLKPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+Q+P F A+Y + + + F G DL + + Sbjct: 143 LLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR---------------------SLV 179 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I++ F Q +S + Q ++ MP++ +F S PAG+ +YW Sbjct: 180 LTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFF 239 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 SI+QQ + + + L +++ ++KN Sbjct: 240 SIIQQLITT--YLLKPRLHKQIKEEYAKNPPK 269 >gi|312136222|ref|YP_004003560.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor owensensis OL] gi|311776273|gb|ADQ05760.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor owensensis OL] Length = 341 Score = 111 bits (276), Expect = 4e-22, Method: Composition-based stats. Identities = 65/254 (25%), Positives = 119/254 (46%), Gaps = 34/254 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 WF F+A P+ L+ Y+ + ++GIA++L T+ V+ L PL KQ S + M Sbjct: 4 TWFDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIHSMSKMA 63 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P++ E+++K+K + LQ+ M++LY+ NP AGCWP+L+Q+P+ F++Y V Sbjct: 64 EVAPRLQEIQQKYKN-DQKKLQEEMLKLYQETGYNPAAGCWPLLIQMPILFSLYYVFQNP 122 Query: 451 LEMRHAPFWGWIKDLAAA-----------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 L ++KDL D L + + PI+ + Sbjct: 123 LVYVLGKSHQYVKDLVTGATGYAITQRIVDEAQKLGLDMHFLGINLAKKELLVLPILSAA 182 Query: 500 SMFI--------QMKMSPPPADKGQAMI--------LNWMPVVFVFALSSFPAGLIIYWS 543 +M + Q K +P + + + + P++ F P+GL++YW+ Sbjct: 183 TMLLSVWFSSNSQKKFNPQYSQSQSNAMAESINKSFMIFSPLMSYFIALQVPSGLVLYWT 242 Query: 544 WSNVISIVQQAVIM 557 +N+ +I+QQ + Sbjct: 243 VTNLFTILQQFIAN 256 >gi|331698376|ref|YP_004334615.1| membrane protein [Pseudonocardia dioxanivorans CB1190] gi|326953065|gb|AEA26762.1| membrane protein insertase, YidC/Oxa1 family [Pseudonocardia dioxanivorans CB1190] Length = 391 Score = 110 bits (275), Expect = 5e-22, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 102/280 (36%), Gaps = 55/280 (19%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F +F + +++ + ++++ + ++ + Q S Sbjct: 3 NFLYYPVSAVMWFWHQAFALVLGPSSGFA--WALSVVFLVLTLRAIMIKPFLSQVRSGRR 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ + P++ E+R++ Q + +L K H ++ L GC P+L+Q+PVF A+ V+ Sbjct: 61 MRALAPQLAEIRKRHANDK-QKMLAETQKLQKEHGVSTLGGCLPLLIQMPVFLALLHVLR 119 Query: 449 I------SLE----------------------MRHAPFWGWIKDLAAADPTNIFTLFGIL 480 + E + AP W+ P ++ FG Sbjct: 120 YFNRPGLTFEQNAAIGNYVFGPDEVRSFLEARLFGAPLSSWVSM-----PQSLLDSFGSH 174 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSP--------PPADK-GQAMILN-WM---PVVF 527 + ++ +++ I + S P + QA + +M P +F Sbjct: 175 VERWEVVVVAVPLMLLAAVATHITARNSQRQQLAAQTAPPEPGTQAAQMAGFMKLTPWIF 234 Query: 528 ------VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +FP +++YW +N ++VQQ ++ K Sbjct: 235 PLGVILGGLFFTFPIAILLYWLTNNGWTMVQQHLVHKAMD 274 >gi|322388371|ref|ZP_08061974.1| stage III sporulation protein J [Streptococcus infantis ATCC 700779] gi|321140684|gb|EFX36186.1| stage III sporulation protein J [Streptococcus infantis ATCC 700779] Length = 271 Score = 110 bits (275), Expect = 5e-22, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 109/257 (42%), Gaps = 31/257 (12%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ D F+ F F + + G+ I+L TV ++ + P+ + Q V++ M+ Sbjct: 25 EVSADSADFWSNLVYFFAETIRFLSFDVSIGLGIILFTVLIRTILLPVFQTQMVASRKMQ 84 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP I ELRE++ + L + +L+K I A WP+L+Q+P+ A+++ + Sbjct: 85 EAQPLIKELRERYPGRDMESRTKLDQETRKLFKELGIKQSASFWPLLIQMPILLALFQAL 144 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + W +L AD T + PI+ +L F+ + Sbjct: 145 SN-VDFLKTGHFLWF-NLGGADTTF-------------------VLPILAALFTFLSSWL 183 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 S + ++ MPV+ F S P+G+ +YW+ SN + Q ++ Sbjct: 184 SNKALPEKNGAMTGMMYGMPVIIFFFAISAPSGVALYWAVSNAYQVFQTYLLN----NPF 239 Query: 565 GLIDRLRSTFSKNYNSQ 581 +I+ + + + Sbjct: 240 KIIEEREADVKAKKDLE 256 >gi|163845720|ref|YP_001633764.1| 60 kDa inner membrane insertion protein [Chloroflexus aurantiacus J-10-fl] gi|222523425|ref|YP_002567895.1| 60 kDa inner membrane insertion protein [Chloroflexus sp. Y-400-fl] gi|163667009|gb|ABY33375.1| 60 kDa inner membrane insertion protein [Chloroflexus aurantiacus J-10-fl] gi|222447304|gb|ACM51570.1| 60 kDa inner membrane insertion protein [Chloroflexus sp. Y-400-fl] Length = 314 Score = 110 bits (275), Expect = 5e-22, Method: Composition-based stats. Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 15/234 (6%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + L+ +F +L GN + I+L T+ +L PL S+ M+ +QP Sbjct: 1 MNIWSAFVGLLEQLLLFFSSLTGNMALGIVLFTIAARLFILPLTLSSLRSSRRMQEVQPI 60 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEM 453 + E++ K+ PQ LQ+ +++Y+ H INP+ GC P+LLQ+P+FF +Y+ + E Sbjct: 61 LKEIQRKY-GKDPQRLQEETLRVYREHKINPVGGCLPLLLQLPIFFGVYQAVYHLMVPEQ 119 Query: 454 R-----HAPFWGWIKDLAAADPTNIFTLFGILPFYLP---GFMHVGIWPIIMSLSMFIQM 505 R A + LA F + +P + P I P++ + +Q Sbjct: 120 RVNLSAAAAEMLKDERLAQILAAPFFGMDLGVPAFGPNGFAGFAYLILPVLSIVLQLMQQ 179 Query: 506 KM-SPPPADKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 M +P D Q + MP VF + +FP G ++YW S+V+ +VQQ Sbjct: 180 LMATPRVQDPQQKAFTQAMLIMPFVFGYIAFTFPTGAVLYWVVSSVVGVVQQYF 233 >gi|300362682|ref|ZP_07058858.1| stage III sporulation protein J [Lactobacillus gasseri JV-V03] gi|300353673|gb|EFJ69545.1| stage III sporulation protein J [Lactobacillus gasseri JV-V03] Length = 291 Score = 110 bits (275), Expect = 5e-22, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 21/239 (8%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 +W Y + ++ + ++G AI++ T+ V+++ PL S A + +QP Sbjct: 46 NWWDRYIVYYISQFILWIASLVRDSYGWAIIIFTIIVRIILLPLNAISIKSMAKQQKVQP 105 Query: 395 KIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++D LR+K+ Q LQ+ +LYK INP GC P+L+Q+PV +A+Y+ I + Sbjct: 106 QMDALRKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTP 165 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 ++ + W+ DL DP I P F + S +I +P Sbjct: 166 QL-QNGRFLWM-DLGRPDPYYIM------PVLAAAFTFI---------STYISQMSTPQS 208 Query: 512 ADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + G + + MP++ + + + +YW SN+ +VQ ++ + L ++ Sbjct: 209 SQNGMTKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFILQNPFKYQRELEEQ 267 >gi|170783400|ref|YP_001711734.1| putative inner membrane protein translocase component YidC [Clavibacter michiganensis subsp. sepedonicus] gi|169157970|emb|CAQ03180.1| membrane insertion protein [Clavibacter michiganensis subsp. sepedonicus] Length = 320 Score = 110 bits (275), Expect = 5e-22, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 108/251 (43%), Gaps = 28/251 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 ++ + + + ++I+ + V+ P+ +Q + M + P++ Sbjct: 16 ELILVGFHTLWTTLGLDPDNGATWVLSIVGLVLVVRAALIPIFVRQIKNQRRMMEVVPQL 75 Query: 397 DELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL- 451 ++++K+K Q + + + LYK NPL+ C P+LLQ+P+FF++Y V+ + Sbjct: 76 KKIQDKYKGKRDQFSREAMSRETMALYKDTGTNPLSSCLPLLLQMPIFFSLYSVLHRAAV 135 Query: 452 -EMRH--------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 E+ + +G L A + I T G + + V I+MS S F Sbjct: 136 EELPGIGLLNEQLSRSFGESSFLGAPLQSAISTANGNITVIVIATTMV----ILMSASQF 191 Query: 503 IQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 I P K Q ++L +P+VF + +FP G++ YW SN ++ Q Sbjct: 192 ITQLQIMAKNMSEETKASPMFKQQRILLYILPLVFAVSGIAFPLGVMFYWLVSNFWTMGQ 251 Query: 553 QAVIMKMHGAE 563 Q ++++ Sbjct: 252 QFLVIRNMPTP 262 >gi|256398143|ref|YP_003119707.1| hypothetical protein Caci_9053 [Catenulispora acidiphila DSM 44928] gi|256364369|gb|ACU77866.1| 60 kDa inner membrane insertion protein [Catenulispora acidiphila DSM 44928] Length = 328 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 114/283 (40%), Gaps = 40/283 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 +I F + + + ++ +AI+ T+ ++ PL +KQ S NM Sbjct: 6 LSPIIWATSFVMMLWHRAFGAIFGSDSSASWVLAIIFLTITIRAAMIPLFRKQIKSMQNM 65 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L++K+K Q LQ+ M++LYK + +P A C PILLQ P F +Y+V+S Sbjct: 66 QRLQPQIQALQKKYKLDK-QKLQQEMMKLYKDNGTSPFASCMPILLQTPFFMGLYRVLS- 123 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTL-FGILPFYLPGFMHVGIWPIIMSLS-------- 500 H + L+ +D + F P L H + ++ Sbjct: 124 -----HVSAGNAVGALSQSDSVSAMHASFFGAPLSLSFLHHTPAQMSRIGVTSVTNLQII 178 Query: 501 -----------MFIQMKMSPP-----------PADKGQAMILNWMPVVFVFALSSFPAGL 538 F+ +M P + Q ++L MP +F + G+ Sbjct: 179 AIIMAIIYATSQFLTQRMMMAKNTNLDNSVPNPMMQSQKIMLYVMPFGMLFFSLNVQIGV 238 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 ++Y +NV +I QQ ++ + + F++N + Sbjct: 239 VLYLMTTNVWTIGQQFYTLRNSPMPGSQAE--KEMFARNKAKE 279 >gi|32307520|gb|AAP79165.1| plastid membrane protein albino 3 [Bigelowiella natans] Length = 440 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 11/228 (4%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 + G++I+L TVFVKLL FPL ++Q T M IQPKI E++ K+K P + + + Sbjct: 151 QSIGLSIVLFTVFVKLLTFPLNEQQIKGTERMGIIQPKIKEIQAKYKDDPNK-SAEKLQS 209 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAAAD--PTNIF 474 +Y + +NPLAG P QIP+F A+Y+ + + W+ +L P Sbjct: 210 VYAENQVNPLAGLLPAFAQIPIFIALYRALQNLATDGQMNQPFLWLPNLEGPTFGPIGTN 269 Query: 475 TLF-----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-KGQAMILNWMPVVFV 528 LF G+ + PI + S + ++ Q ++P++F Sbjct: 270 WLFTGFHDGVPQYGWHDTAAYLSLPIFLIFSQIVSQRLLVSKEQYDAQPQWTKFLPIIFG 329 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + + P+GL +YW +N+++ + + + ++ LR SK Sbjct: 330 YFSLNVPSGLAVYWVANNIVTTGTNIALKQKFKNDPEVVA-LRERISK 376 >gi|126278077|ref|XP_001379890.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 518 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 79/213 (37%), Gaps = 35/213 (16%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM 415 L + AI+ TV +++ FPL K + N P+I + + ++ + Sbjct: 219 LGLPWWGAIVTCTVVARIMIFPLIVKGQREAVKINNHMPEIQKFSTRMNEAKLSGDKFEF 278 Query: 416 IQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKD 464 + K H+++PL G L Q PVF + + + + W +D Sbjct: 279 SRAFSELQLYQKKHDVSPLRGFIVPLAQAPVFISFFIALREMAYLPVPSMQNGGLWWFQD 338 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK-----GQAMI 519 L AADP P++++ SM+ +++ + Sbjct: 339 LTAADPLY-------------------ALPLLVTASMWAILELGAETGVNNANLRMMKTV 379 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +P++ + +FP + YW SN+ S+ Q Sbjct: 380 FRVLPLIVLPFTINFPTAVFTYWFSSNLFSLAQ 412 >gi|317499291|ref|ZP_07957564.1| YidC/Oxa1 family membrane protein insertase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893460|gb|EFV15669.1| YidC/Oxa1 family membrane protein insertase [Lachnospiraceae bacterium 5_1_63FAA] Length = 336 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 103/269 (38%), Gaps = 21/269 (7%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + + F +I + ++ ++ N G+ I+L T+ KL+ Sbjct: 5 MLLAQAQQSTGNGGILAPFVIIFGWIIRAIYDGLAAMGIY--NVGLCIILFTLVSKLILL 62 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWP 432 P+ KQ S +++QP+I+++ +K++ Q Q+ M ++Y + +P GC P Sbjct: 63 PVTMKQQRSMKINQHMQPEINKITKKYRNKRDQASMMKQQEEMQKVYAKYGSSPTGGCLP 122 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 L+Q P+ A+Y VI R + N+F + + I Sbjct: 123 TLIQFPIIMALYYVI------RGVNTYIPQIARDVQFKPNLFLGMDLNSAPGFRLTPLLI 176 Query: 493 WPIIMSLSMFIQMKMSPPPADK--------GQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 P++ + F+ K S ++ MP++ S P G+ +YWS Sbjct: 177 IPVLSFIFQFLSAKTSMSTTQMDDSTPGAGMTKSMMYTMPLMSFVMCISLPIGIGLYWSA 236 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRST 573 S + +QQ H + + + Sbjct: 237 SALFQYIQQVAFN-YHYDHADMDKIIEKS 264 >gi|157149832|ref|YP_001449500.1| membrane protein oxaA 1 precursor [Streptococcus gordonii str. Challis substr. CH1] gi|157074626|gb|ABV09309.1| Membrane protein oxaA 1 precursor [Streptococcus gordonii str. Challis substr. CH1] Length = 271 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 29/257 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ + F F + G+ GI I+L T+ ++ + P+ + Q S+ M+ Sbjct: 25 EVTSQSTDLWEKFVYFFAETIRFLSFNGSTGIGIILFTIIIRTVLLPVFQIQMTSSRKMQ 84 Query: 391 NIQPKIDELREKFKQSPPQVLQ---KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP I L+ K+ + +LYK +NPLA P+ +Q+PV A+Y+ + Sbjct: 85 EAQPHIKALQAKYPGKDMESRNLLATETQKLYKELGVNPLASFIPLFVQMPVLIALYQAL 144 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + +R + W+ +LA DP I P++ +L F+ + Sbjct: 145 TRVAFLR-TGHFLWL-NLAETDPYY-------------------ILPVLAALFTFLSTWL 183 Query: 508 SP---PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--KMHGA 562 + + ++ MP++ + +F +G+ +YW+ SN + Q V+ A Sbjct: 184 NNKGLAERNGAMTVMTYLMPLMIFWFALTFSSGVALYWTVSNAYQVGQTLVLSNPFKMIA 243 Query: 563 EIGLIDRLRSTFSKNYN 579 E + Sbjct: 244 EREAKLNAAREQEEKKK 260 >gi|257437741|ref|ZP_05613496.1| stage III sporulation protein J [Faecalibacterium prausnitzii A2-165] gi|257200048|gb|EEU98332.1| stage III sporulation protein J [Faecalibacterium prausnitzii A2-165] Length = 360 Score = 110 bits (274), Expect = 6e-22, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 118/297 (39%), Gaps = 54/297 (18%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 Y + P+ +M + Y L+ N+G I+L T+ + ++ PL Q S A M QP Sbjct: 5 MNPLYILGWPLGYVMEWIYKLIPNYGWDIILFTLLITVIKIPLQLNQQKSMARMSAFQPM 64 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE--- 452 + E+++K++ P+ Q+ +++L + P AGC P+L+ V F + +V+ L+ Sbjct: 65 VAEIQKKYRD-KPEKQQEELMKL-QEQGYKPTAGCMPMLVNFLVMFGVIEVVYRPLQRIF 122 Query: 453 ------MRHAPFWGWIKDLA-------------------------AADPT-------NIF 474 + A ++ D Sbjct: 123 HIGADALTAAGEALTAMGISFTTVTRDTNIIAQVISGESTVSSCFTPDQVATITEFGQHM 182 Query: 475 TLFGILPFYLPGF------MHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMI---LNWMP 524 FGI +P + + + I P++ ++MF+ +S + Q + + MP Sbjct: 183 DFFGIDLTRVPQYSLAAENLPLLILPVLAIVTMFLSTHISMKASGQEMQGSMKLTMYMMP 242 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +++VF + P+ +Y+ SN++ VQ ++MK + + + + Q Sbjct: 243 LMYVFFCFTVPSAFSLYYVVSNILMTVQS-LLMKKIYDPEKMKAEVAAEMAARKKEQ 298 >gi|322391229|ref|ZP_08064701.1| stage III sporulation protein J [Streptococcus peroris ATCC 700780] gi|321145982|gb|EFX41371.1| stage III sporulation protein J [Streptococcus peroris ATCC 700780] Length = 271 Score = 110 bits (274), Expect = 6e-22, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 110/257 (42%), Gaps = 31/257 (12%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ D F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ Sbjct: 25 EVSADSADFWSKLVYFFAVTIRFLSFDISIGLGIILFTVLIRTILLPVFQTQMVASRKMQ 84 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I ELRE++ + L + +L+K I A WP+L+Q+P+ A+++ + Sbjct: 85 EAQPRIKELRERYPGRDMESRTKLDQETRKLFKELGIKQSATFWPLLIQMPILLALFQAL 144 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + W +L AD T + PI+ +L F + Sbjct: 145 SN-VDFLKTGHFLWF-NLGGADTTF-------------------VLPILAALFTFFSSWL 183 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 S + ++ MPV+ F S P+G+ +YW+ SN ++Q ++ Sbjct: 184 SNKALPEKNAAMTGMMYGMPVIIFFFAISAPSGVALYWAVSNAYQVLQTYLLN----NPF 239 Query: 565 GLIDRLRSTFSKNYNSQ 581 +I + + + Sbjct: 240 KIIAEREADLQAKKDLE 256 >gi|302872912|ref|YP_003841548.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor obsidiansis OB47] gi|302575771|gb|ADL43562.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor obsidiansis OB47] Length = 341 Score = 110 bits (274), Expect = 6e-22, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 34/254 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 W F+A P+ L+ Y+ + ++GIA++L T+ V+ L PL KQ S + M Sbjct: 4 TWLDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIHSMSKMA 63 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P++ E+++K+K + LQ+ M++LY+ NP AGCWP+L+Q+P+ F++Y V Sbjct: 64 EVAPRLQEIQQKYKN-DQKKLQEEMLKLYQETGYNPAAGCWPLLIQMPILFSLYYVFQNP 122 Query: 451 LEMRHAPFWGWIKDLAAA-----------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 L +++DL D L + + PI+ + Sbjct: 123 LVYVLGKSHQYVRDLVTGATGYGITQRIVDEAQKLGLDMHFLGINLAKKELLVLPILSAA 182 Query: 500 SMFIQ----------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 +M + S A+ + P++ F P+GL++YW+ Sbjct: 183 TMLLSVWFSSNSQKKFNPQYSQSQSNAMAESMNRSFMIISPLMSYFIALQVPSGLVLYWT 242 Query: 544 WSNVISIVQQAVIM 557 +N+ +I+QQ V Sbjct: 243 VTNLFTILQQFVAN 256 >gi|225869761|ref|YP_002745708.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. equi 4047] gi|225699165|emb|CAW92392.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. equi 4047] Length = 275 Score = 110 bits (274), Expect = 7e-22, Method: Composition-based stats. Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ + F + + G+ GI I+L T+ ++LL PL Q S M+ Sbjct: 30 EVTAQSSSSWEQLVYFFAKAIQWLSFDGSTGIGIILFTIMIRLLLLPLFNMQIKSGQKMQ 89 Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +IQP++ L++K+ L + LYK + +NP P+L+Q+PV FA+++ + Sbjct: 90 DIQPELKALQKKYAAKDTATRMKLAEESQALYKKYGVNPYMSLLPLLIQMPVMFALFQSL 149 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + +R + W++ LA D H+ I PI+ ++ F+ + Sbjct: 150 TRVAFLR-EGTFLWVE-LARHD-------------------HLFILPILAAVFTFLSTWL 188 Query: 508 SPPPADKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + A + AM + MPV F + +G+++YW+ SN +VQ + Sbjct: 189 TNLAAREKTAMITIMTYVMPVFIFFMGFNLASGVVLYWAVSNAFQVVQLLLFN 241 >gi|260662535|ref|ZP_05863430.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN] gi|260553226|gb|EEX26169.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN] Length = 259 Score = 110 bits (274), Expect = 7e-22, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 102/235 (43%), Gaps = 27/235 (11%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++I + + N+ G +G+ I++ T+ ++++ P+ Q S + + P++ Sbjct: 18 IWDHYIVYNCSRFIIWLSNIFGGYGMGIIIFTIIIRIIILPMMFYQTKSMMKTQELAPQL 77 Query: 397 DELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 L++K+ + +Q+ +LYK +NP A P+L+Q+PV +A+Y+ I + ++ Sbjct: 78 KALQKKYSSKDRETMQQLQIEQQKLYKEAGVNPFASMLPLLIQLPVMWALYQAIWRTAQL 137 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA- 512 + + W++ L DP + PI+ ++ FI +S Sbjct: 138 K-TGTFLWLQ-LGHTDPYF-------------------VLPILAAVFTFISSWLSMASMP 176 Query: 513 --DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + + MP++ F F A + +YW +N +VQ VI Sbjct: 177 EKNSMTTTMTWVMPIMIFFMALQFSAAITLYWVVTNAFQVVQTLVIQNPFKIRRE 231 >gi|139474368|ref|YP_001129084.1| OxaA-like protein precursor [Streptococcus pyogenes str. Manfredo] gi|134272615|emb|CAM30882.1| membrane protein OxaA 2 precursor [Streptococcus pyogenes str. Manfredo] Length = 307 Score = 110 bits (274), Expect = 7e-22, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 31/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + + + T +P +++ Q Q ++ + H INPL GC P Sbjct: 83 SWKASYQSEKMTFLKPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+Q+P F A+Y + + + F G DL + + Sbjct: 143 LLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR---------------------SLV 179 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I++ F Q +S + Q ++ MP++ +F S PAG+ +YW Sbjct: 180 LTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFF 239 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 SI+QQ + + + L +++ ++K Sbjct: 240 SIIQQLITT--YLLKPRLHKQIKEEYAKTPPK 269 >gi|168183723|ref|ZP_02618387.1| membrane protein OxaA [Clostridium botulinum Bf] gi|237797102|ref|YP_002864654.1| putative inner membrane protein translocase component YidC [Clostridium botulinum Ba4 str. 657] gi|182673143|gb|EDT85104.1| membrane protein OxaA [Clostridium botulinum Bf] gi|229260568|gb|ACQ51601.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum Ba4 str. 657] Length = 217 Score = 110 bits (274), Expect = 7e-22, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 31/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + F + + N ++GIAI+L T+ ++LL PL KQ S+ M +QP+I Sbjct: 8 FVQFFKFIHGAVSNVISNPNFSYGIAIILVTLIIRLLILPLNIKQTKSSLRMNELQPEIK 67 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+ K+K PQ L + ++LYK +NPL GC P+L+Q P+F A+Y V + + Sbjct: 68 KLQAKYKN-DPQRLNQKTMELYKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTGINGIS 126 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-- 515 + W+KDLA D + ++ + + + P + Sbjct: 127 -FLWVKDLAKPD---------------------VVLAVLSGATTYFSGTLMTSPDNSQAG 164 Query: 516 QAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 Q +N M + + + L++YW +N+I I+Q VIMK L ++ + Sbjct: 165 QMKSMNIGMSIFMIVISWKLKSALVLYWVINNLIQIIQT-VIMKKM----ELRGKVEA 217 >gi|125718923|ref|YP_001036056.1| membrane protein (preprotein translocase) oxaA 1 precursor [Streptococcus sanguinis SK36] gi|323350582|ref|ZP_08086244.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis VMC66] gi|125498840|gb|ABN45506.1| Membrane protein (preprotein translocase) oxaA 1 precursor, putative [Streptococcus sanguinis SK36] gi|322123264|gb|EFX94949.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis VMC66] gi|324992539|gb|EGC24460.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK405] gi|324995932|gb|EGC27843.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK678] gi|325697377|gb|EGD39263.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK160] gi|327488846|gb|EGF20645.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK1058] Length = 271 Score = 110 bits (274), Expect = 7e-22, Method: Composition-based stats. Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 29/232 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I L+EK+ + Sbjct: 46 RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + +LYK +NP A P+ +Q+PV A+++ ++ ++ + W+ +L A Sbjct: 106 TALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525 DPT I P++ +L F +S + G +++ MPV Sbjct: 164 DPTF-------------------ILPLLAALFTFFSTWLSNKALPERNGGMTVMMYLMPV 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 V F +G+ +YW+ SN +VQ ++ + +I + + Sbjct: 205 VIFFFALYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254 >gi|225869297|ref|YP_002745245.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. zooepidemicus] gi|225702573|emb|CAX00574.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. zooepidemicus] Length = 275 Score = 110 bits (274), Expect = 7e-22, Method: Composition-based stats. Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ + F + + G+ GI I+L T+ ++LL PL Q S M+ Sbjct: 30 EVTAQSSSSWEQLVYFFAKAIQWLSFDGSTGIGIILFTIMIRLLLLPLFNMQIKSGQKMQ 89 Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +IQP++ L++K+ L + LYK + +NP P+L+Q+PV FA+++ + Sbjct: 90 DIQPELKALQKKYAAKDTATRMKLAEESQALYKKYGVNPYMSLLPLLIQMPVMFALFQSL 149 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + +R + W++ LA D H+ I PI+ ++ F+ + Sbjct: 150 TRVAFLR-EGTFLWVE-LARHD-------------------HLFILPILAAVFTFLSTWL 188 Query: 508 SPPPADKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + A + AM + MP+ F + +G+++YW+ SN +VQ + Sbjct: 189 TNLAAREKTAMITIMTYVMPIFIFFMGFNLASGVVLYWAVSNAFQVVQLLLFN 241 >gi|315605512|ref|ZP_07880549.1| stage III sporulation protein J [Actinomyces sp. oral taxon 180 str. F0310] gi|315312779|gb|EFU60859.1| stage III sporulation protein J [Actinomyces sp. oral taxon 180 str. F0310] Length = 447 Score = 110 bits (274), Expect = 7e-22, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 122/264 (46%), Gaps = 33/264 (12%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F I + W + + +L+ + + ++I+L TV V++ PL KQ S+ M Sbjct: 9 FAWAISYLWVWI--HDLLVLLGFSSGSGVAWVLSIVLLTVLVRIAIIPLFLKQIRSSRAM 66 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYK 445 + IQP++ +++EK+K Q ++ M++ L + H ++P A C P+L+Q+PV F +Y+ Sbjct: 67 QAIQPEMRKIQEKYKGKKDQASRQKMMEETQALQRKHKVSPFASCLPMLVQMPVLFGMYR 126 Query: 446 VI-------SISLEMRHAPFWGWIKDLAAADPTNIFT--LFGIL-------PFYLP-GFM 488 I + + R + L A+ + I +FG+ F P Sbjct: 127 AIIAVSSIANGTYTYRGEST-DHLGPLNASVSSEIVNSTVFGVPLSHTLRDSFDQPMAVA 185 Query: 489 HVGIWPIIMSLSMFIQMKM----SPP-----PADKGQAMILNWMPVVFVFALSSFPAGLI 539 ++M + F+ M+M + P P + Q ++ MP++F+F+ F G++ Sbjct: 186 VFVAAIVMMVVLQFVSMRMSFSRNMPDMGDNPMAQSQRSMMYVMPLMFIFSGVFFQMGVV 245 Query: 540 IYWSWSNVISIVQQAVIMKMHGAE 563 IY ++V ++ Q +K+ Sbjct: 246 IYTVTASVWALAQAYWTIKVMPTP 269 >gi|94993686|ref|YP_601784.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS10750] gi|94547194|gb|ABF37240.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10750] Length = 307 Score = 110 bits (274), Expect = 8e-22, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 31/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + + + T +P +++ Q Q ++ + H INPL GC P Sbjct: 83 SWKASYQSEKMTFLKPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+Q+P F A+Y + + + F G DL + + Sbjct: 143 LLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR---------------------SLV 179 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I++ F Q +S + Q ++ MP++ +F S PAG+ +YW Sbjct: 180 LTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFF 239 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 SI+QQ + + + L +++ ++K Sbjct: 240 SIIQQLITT--YLLKPRLHKQIKEEYAKTPPK 269 >gi|146297758|ref|YP_001181529.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145411334|gb|ABP68338.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 349 Score = 110 bits (273), Expect = 8e-22, Method: Composition-based stats. Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 34/254 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 W F+A P+ L+ Y+ + ++GIAI+L T+ V+ L PL KQ ST+ M Sbjct: 4 TWLDFLAIPLGRLLKLIYDFLHGANIPGSYGIAIILLTLIVRGLLLPLYIKQIASTSKMA 63 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P+I E+++K+K ++ Q+ M++LY+ NP +GCWP+L+QIP+ FA+Y V Sbjct: 64 EVAPRIQEIQQKYKGDQRKM-QEEMLKLYQETGYNPASGCWPLLVQIPILFALYYVFQNP 122 Query: 451 LEMRHAPFWGWIKDLAA-----ADPTNIFTLFGILPFYLPGFMH------VGIWPIIMSL 499 L +++DL A I L + F + + PI+ + Sbjct: 123 LVYVLGKTHQYVRDLVQGKAGYAITQTIINEAQKLGLDMHFFGINLAQKELIVLPILSAA 182 Query: 500 SMFIQ----------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 +MF+ S A+ ++ + P++ F PAGL++YW+ Sbjct: 183 TMFLSIWFSTNSQKRFNPQYAQSQSNAMAEGMNRTMMIFSPLMSYFIALQVPAGLVVYWT 242 Query: 544 WSNVISIVQQAVIM 557 +N+ SI+QQ + Sbjct: 243 VTNLFSILQQFIAN 256 >gi|160944271|ref|ZP_02091500.1| hypothetical protein FAEPRAM212_01780 [Faecalibacterium prausnitzii M21/2] gi|158444453|gb|EDP21457.1| hypothetical protein FAEPRAM212_01780 [Faecalibacterium prausnitzii M21/2] Length = 357 Score = 110 bits (273), Expect = 8e-22, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 113/295 (38%), Gaps = 49/295 (16%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +FY ++ P+ +M + Y L+ N+G I+L T+ + ++ PL Q S A M Q Sbjct: 3 KGMNFFYILSGPLGYVMEWIYKLLPNYGWDIILFTLLINIVKIPLQTSQQKSMAKMSAFQ 62 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE- 452 P I E++ K+K P+ Q+ +++L + P AGC P+LL V + V+ LE Sbjct: 63 PMIAEIQTKYKN-KPEKQQEELMKLQQDFGYKPTAGCVPMLLNFLVMLGVIGVVYNPLER 121 Query: 453 MRH----------------------------------APFWGWIKDLAAADPTNIFTLFG 478 + H A G + + I Sbjct: 122 IFHISAAALASAGEAMTAAGISFTAITRDTNIIAEVLAGNSGVLGCFSVEQIATITEFGQ 181 Query: 479 ILPFYLPGFMHVG--------IWPIIMSLSMFIQMKMSP-PPADKGQAMI---LNWMPVV 526 + F + + P++ ++MF+ +S + Q + + MP++ Sbjct: 182 HMNFLGIDLTRIPKLGLSLDIVLPLLSVITMFLSTHISMKASGQQMQGSMKLTMYMMPLM 241 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 ++F +FP +Y+ SN++ Q +M+ + + + + + Sbjct: 242 YLFFCFTFPLAFSLYYVISNIVMTAQTQ-VMRKFYDPEKMRKEVEAEIAAKRKQE 295 >gi|261368848|ref|ZP_05981731.1| stage III sporulation protein J [Subdoligranulum variabile DSM 15176] gi|282569122|gb|EFB74657.1| stage III sporulation protein J [Subdoligranulum variabile DSM 15176] Length = 339 Score = 110 bits (273), Expect = 9e-22, Method: Composition-based stats. Identities = 75/273 (27%), Positives = 125/273 (45%), Gaps = 46/273 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 YF+A + L+ YNL+GN+ +++ T+ +KLL FPLA Q STA M QP Sbjct: 1 MQILYFLAILIGPLVKVLYNLIGNYAATMIVATLILKLLLFPLAIHQQKSTAKMSVFQPL 60 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL---- 451 ++E+++K+K +P + Q+ M++L + H NP+AGC P+LL + V F V+ + Sbjct: 61 MNEIQQKYKNNPEK-QQEEMMKLQQEHGFNPMAGCLPMLLTMLVLFGFLGVVYYPVHYIF 119 Query: 452 -----EMRHA----------------PFWGWIKDLAAADPTNIFT------------LFG 478 +R A I + A DP+ I FG Sbjct: 120 GVSDAAVRQACETLGLATANATTMQTSLIQAIHNGAVIDPSIISADVVNEIKNFNTVFFG 179 Query: 479 ILPFYLPGF--MHVGIWPIIMSLSMFI----QMKMSPP--PADKGQAMILNWMPVVFVFA 530 + +PGF + I+PII +++M + K+S +++ M ++FV Sbjct: 180 MDMCDIPGFNLTPIAIFPIIAAVTMILSYIFTQKLSGMGSQMQGSMKVMMWVMNLMFVSF 239 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + P G +Y+ SN+ I Q V K++ E Sbjct: 240 CFNAPVGFSLYYGVSNLFQIGQSFVTYKIYSPE 272 >gi|170760805|ref|YP_001788987.1| putative inner membrane protein translocase component YidC [Clostridium botulinum A3 str. Loch Maree] gi|169407794|gb|ACA56205.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum A3 str. Loch Maree] Length = 217 Score = 110 bits (273), Expect = 9e-22, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 31/238 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + F + + N ++GIAI+L T+ ++LL PL KQ S+ M +QP+I Sbjct: 8 FVQFFKFIHGAVSNVISNPNFSYGIAIILVTLIIRLLILPLNIKQTKSSLRMNELQPEIK 67 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+ K+K PQ L + ++LYK +NPL GC P+L+Q P+F A+Y V + + Sbjct: 68 KLQAKYKN-DPQKLNQKTMELYKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTGINGIS 126 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-- 515 + W+KDLA D + ++ + + + P + Sbjct: 127 -FLWVKDLAKPD---------------------VVLAVLSGATTYFSGTLMTSPDNSQAG 164 Query: 516 QAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 Q +N M + + + L++YW +N+I I+Q VIMK L ++ + Sbjct: 165 QMKSMNIGMSIFMIVISWKLKSALVLYWVINNLIQIIQT-VIMKKM----ELRGKVEA 217 >gi|187777370|ref|ZP_02993843.1| hypothetical protein CLOSPO_00926 [Clostridium sporogenes ATCC 15579] gi|187774298|gb|EDU38100.1| hypothetical protein CLOSPO_00926 [Clostridium sporogenes ATCC 15579] Length = 217 Score = 110 bits (273), Expect = 9e-22, Method: Composition-based stats. Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 29/227 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + F A + + N ++GIAI+L T+ ++LL PL KQ S+ M +QP+I Sbjct: 8 FVQFFAFIHAAVSNVISNPNFSYGIAIILVTLIIRLLILPLNIKQTKSSLRMNELQPEIK 67 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+ K+K PQ L + ++LYK +NPL GC P+L+Q P+F A+Y V + + Sbjct: 68 KLQAKYKN-DPQRLNQKTMELYKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTGINGVS 126 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W+KDLA D + ++ + + + D QA Sbjct: 127 -FLWVKDLAKPD---------------------VVLAVLSGATTYFSGTL-MASGDSSQA 163 Query: 518 MILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + M + + + L++YW +N+I I+Q VIMK Sbjct: 164 GQMKSMNIGMSIFMIVISWKLKSALVLYWVINNLIQIIQT-VIMKKM 209 >gi|332523606|ref|ZP_08399858.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus porcinus str. Jelinkova 176] gi|332314870|gb|EGJ27855.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus porcinus str. Jelinkova 176] Length = 297 Score = 110 bits (273), Expect = 9e-22, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 74/210 (35%), Gaps = 31/210 (14%) Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPIL 434 + + P ++ Q Q ++ K + IN L GC P+L Sbjct: 73 KASYQSEKMAYLKPVFDPINQRVKNATTQEEKFAAQSELMAAQKENGINMLGGMGCLPLL 132 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P F A+Y + + + I DL + I Sbjct: 133 IQMPFFSAMYFAALHTKGI-STSHFLGI-DLGSK---------------------SLILT 169 Query: 495 IIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 I+++ F Q +S + Q ++ MP++ +F + PAG+ +YW SI Sbjct: 170 AIIAVLYFFQSWLSMQAVAEEQRAQMKTMMYTMPIMMIFMTMTLPAGVGLYWLVGGFFSI 229 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 +QQ + + + L ++ F N Sbjct: 230 IQQLITT--YFIKPKLRQQIEEEFKNNPPK 257 >gi|325695448|gb|EGD37348.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK150] Length = 271 Score = 110 bits (273), Expect = 9e-22, Method: Composition-based stats. Identities = 53/232 (22%), Positives = 105/232 (45%), Gaps = 29/232 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I +L+EK+ + Sbjct: 46 RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + +LYK +NP A P+ +Q+PV A+++ ++ ++ + W+ +L A Sbjct: 106 TALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525 DPT I P++ +L F +S + G +++ MPV Sbjct: 164 DPTF-------------------ILPLLAALFTFFSTWLSNKALPERNGGMTVMMYLMPV 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 V F +G+ +YW+ SN +VQ ++ + +I + + Sbjct: 205 VIFFFAFYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254 >gi|251799884|ref|YP_003014615.1| hypothetical protein Pjdr2_5925 [Paenibacillus sp. JDR-2] gi|247547510|gb|ACT04529.1| 60 kDa inner membrane insertion protein [Paenibacillus sp. JDR-2] Length = 272 Score = 110 bits (273), Expect = 9e-22, Method: Composition-based stats. Identities = 57/237 (24%), Positives = 110/237 (46%), Gaps = 36/237 (15%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----I 392 + +++ P L+ + + ++G+A+++ T+ V+++ PL +QY MK I Sbjct: 43 FNHYVVFPFSYLIQHIASFFGDSYGMAVIVMTLLVRIVLLPLMLRQYKGQQGMKQKMSVI 102 Query: 393 QPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVIS 448 QP++++L+EK+K+ P+ LQK ++LY H NP+ GC P+L+Q+P+ +Y I Sbjct: 103 QPELNKLKEKYKEKTPENQAKLQKETMELYSKHQFNPMAIGCLPMLIQMPILTGLYYAIK 162 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 ++ E+ + W + L D I P + + ++Q ++S Sbjct: 163 MTPELAQHS-FLWFQ-LGTPDH---------------------ILPFLAAAIYYVQFRVS 199 Query: 509 PPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 D Q + + PV+ S PA + +YW I+Q V K++ Sbjct: 200 QIGMDSAQQKQMAMLGLLSPVMMGIFSFSAPAAVPLYWVVGGTFMIIQTLVSKKLYP 256 >gi|309799090|ref|ZP_07693343.1| membrane protein OxaA 1 [Streptococcus infantis SK1302] gi|308117325|gb|EFO54748.1| membrane protein OxaA 1 [Streptococcus infantis SK1302] Length = 277 Score = 110 bits (273), Expect = 9e-22, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 106/233 (45%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ + F+ F F + + G+ I+L T+ ++ + P+ + Q V++ M+ Sbjct: 31 EITAESTGFWSKFVYFFAETIRFLSFDTSIGLGIILFTLLIRTILLPVFQIQMVASRKMQ 90 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +QP + ELRE++ + L + M QL+K H + A WPIL+Q+PV A+++ + Sbjct: 91 EVQPLVKELRERYPGRDMESRTKLDQEMRQLFKQHGVKQSASLWPILIQMPVLLALFQAL 150 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S +E + WI +L D T + PI+ ++ F+ + Sbjct: 151 SR-VEFLKTGHFLWI-NLGGVDTTF-------------------VLPILAAIFTFLSTWL 189 Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ MPV+ F P+G+ +YW+ SN ++Q ++ Sbjct: 190 SNKAMVEKNGAMTGMMYAMPVMIFFFAMYSPSGVALYWAVSNAYQVLQTYLLN 242 >gi|42519904|ref|NP_965834.1| stage III sporulation protein J precursor [Lactobacillus johnsonii NCC 533] gi|227889159|ref|ZP_04006964.1| membrane protein chaperone oxaA [Lactobacillus johnsonii ATCC 33200] gi|41584194|gb|AAS09800.1| stage III sporulation protein J precursor [Lactobacillus johnsonii NCC 533] gi|227850388|gb|EEJ60474.1| membrane protein chaperone oxaA [Lactobacillus johnsonii ATCC 33200] Length = 291 Score = 110 bits (273), Expect = 9e-22, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 29/231 (12%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 +W Y + ++ + ++G AI++ T+ V+++ PL S A + +QP Sbjct: 46 NWWDRYIVYYISQFILWIASLVHDSYGWAIIIFTIIVRIILLPLNAISIRSMAKQQKVQP 105 Query: 395 KIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++D LR+K+ Q LQ+ +LYK INP GC P+L+Q+PV +A+Y+ I + Sbjct: 106 QMDALRKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTP 165 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL----SMFIQMKM 507 ++ + W+ DL DP I PI+ ++ S +I Sbjct: 166 QL-QNGRFLWM-DLGRPDPYY-------------------IMPILAAVFTFMSTYISQMS 204 Query: 508 SPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +P + G + + MP++ + + + +YW SN+ +VQ ++ Sbjct: 205 TPQSSQNGMTKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFILQ 255 >gi|19745513|ref|NP_606649.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS8232] gi|50913669|ref|YP_059641.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS10394] gi|94987926|ref|YP_596027.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS9429] gi|94991810|ref|YP_599909.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS2096] gi|306827963|ref|ZP_07461230.1| membrane protein [Streptococcus pyogenes ATCC 10782] gi|38503058|sp|Q8P2D8|OXAA2_STRP8 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|73921526|sp|Q5XDQ5|OXAA2_STRP6 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|19747631|gb|AAL97148.1| hypothetical protein spyM18_0404 [Streptococcus pyogenes MGAS8232] gi|50902743|gb|AAT86458.1| 60 kDa inner membrane protein [Streptococcus pyogenes MGAS10394] gi|94541434|gb|ABF31483.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS9429] gi|94545318|gb|ABF35365.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS2096] gi|304429882|gb|EFM32924.1| membrane protein [Streptococcus pyogenes ATCC 10782] Length = 307 Score = 110 bits (273), Expect = 9e-22, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 31/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + + + T +P +++ Q Q ++ + H INPL GC P Sbjct: 83 SWKASYQSEKMTFLKPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+Q+P F A+Y + + + F G DL + + Sbjct: 143 LLIQMPFFSAMYFAAQYTKGVSTSTFMG--IDLGSR---------------------SLV 179 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I++ F Q +S + Q ++ MP++ +F S PAG+ +YW Sbjct: 180 LTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFF 239 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 SI+QQ + + + L +++ ++K Sbjct: 240 SIIQQLITT--YLLKPRLHKQIKEEYAKTPPK 269 >gi|22537748|ref|NP_688599.1| OxaA-like protein precursor [Streptococcus agalactiae 2603V/R] gi|38503010|sp|Q8DY84|OXAA2_STRA5 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|22534639|gb|AAN00472.1|AE014265_1 lipoprotein, putative [Streptococcus agalactiae 2603V/R] gi|319745517|gb|EFV97819.1| membrane protein [Streptococcus agalactiae ATCC 13813] Length = 310 Score = 110 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 78/213 (36%), Gaps = 27/213 (12%) Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL-- 427 L + K M +P + + E+ + + Q Q ++ + + ++ Sbjct: 78 LGLYQSWKASYQAEKMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGG 137 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+Q+P F AI+ + P F L Sbjct: 138 IGCLPLLIQMPFFSAIFFAARYT-------------------PGVSSATFLGLNLGQKSL 178 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 I I+ + ++ M+ P + ++ MP++ VF S PA + +YW + Sbjct: 179 TLTVIIAILYFVQSWLSMQGVPDEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGI 238 Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 SI+QQ V + + L ++ ++KN Sbjct: 239 FSIIQQLVTT--YVLKPKLRRKVEEEYTKNPPK 269 >gi|228478121|ref|ZP_04062732.1| preprotein translocase subunit YidC [Streptococcus salivarius SK126] gi|228250301|gb|EEK09554.1| preprotein translocase subunit YidC [Streptococcus salivarius SK126] Length = 284 Score = 110 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 26/225 (11%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-A 414 G+ G+ I++ T+ ++ + PL +Q S+ ++ +QP++ L+ ++ + A Sbjct: 66 FGGSIGLGIIIFTILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYA 125 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 LYK H +NP A P+L+Q P+ A+Y ++ E+R + W+ DL DP Sbjct: 126 QQDLYKEHGVNPYASFVPLLIQFPILMALYGALTRVPELR-EGTFLWV-DLGQKDPYF-- 181 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWM-PVVFVFAL 531 I PI+ + F+ ++ A AM ++N M P+ + Sbjct: 182 -----------------ILPILAAAFTFLSTWLTNKAAKDRSAMLLVMNIMLPIFIFWFG 224 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + +G+ +YW+ SN +VQ V I +RL + + Sbjct: 225 TQISSGVALYWAVSNAFQVVQILVFNNPFKI-IEERNRLEAEEKE 268 >gi|306830233|ref|ZP_07463416.1| ParB/SpoJ family partitioning protein [Streptococcus mitis ATCC 6249] gi|304427600|gb|EFM30697.1| ParB/SpoJ family partitioning protein [Streptococcus mitis ATCC 6249] Length = 277 Score = 110 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ D + F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ Sbjct: 31 DITADSTDLWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQIVASRKMQ 90 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I L+E++ + L + M ++YK + + WPIL+Q+PV A+++ + Sbjct: 91 EAQPRIKALQEQYPGRDMESRTKLDQEMRKVYKELGVKHSSSIWPILIQMPVLLALFQAL 150 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S +E + W+ +L D + I PI+ ++ F+ + Sbjct: 151 SR-VEFLKTGHFLWV-NLGGVDTSF-------------------ILPILAAVFTFLSSWL 189 Query: 508 SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ MPV+ S P+G+ +YW+ SN ++Q + Sbjct: 190 SNKALPERSGAMTGMMYGMPVLIFIFAISAPSGVALYWAVSNAYQVLQTYFLN 242 >gi|167745103|pdb|3BS6|A Chain A, 1.8 Angstrom Crystal Structure Of The Periplasmic Domain Of The Membrane Insertase Yidc gi|167745104|pdb|3BS6|B Chain B, 1.8 Angstrom Crystal Structure Of The Periplasmic Domain Of The Membrane Insertase Yidc Length = 280 Score = 110 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 86/263 (32%), Gaps = 17/263 (6%) Query: 67 MSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY 126 + +K L +IN +G + L Y +++S P L ++ + Y A+ Sbjct: 2 QGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL--ETSPQFIYQAQSGL 59 Query: 127 VSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EHYLF 180 N + + + +A F +T L Y Sbjct: 60 TGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPXTYTDAAGNTFTKTFVLKRGDYAV 119 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKS--LVEQK 233 + V N + S G++ + T ++ F + A + K Sbjct: 120 NVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYK 179 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANE 293 + I + N W+ +Y+A+ +IP + + + F + G+ + + Sbjct: 180 FDTIADNENLNISSKGGWVAXLQQYFATAWIPHNDGTNN--FYTANLGNGIAAIGYKSQP 237 Query: 294 ITILPGKSITTTNFLFAGAKEFP 316 + + PG++ + L+ G + Sbjct: 238 VLVQPGQTGAXNSTLWVGPEIQD 260 >gi|55821782|ref|YP_140224.1| cytochrome oxidase biogenesis (Oxa1) family protein, SpoIIIJ [Streptococcus thermophilus LMG 18311] gi|55823700|ref|YP_142141.1| hypothetical protein str1810 [Streptococcus thermophilus CNRZ1066] gi|116628498|ref|YP_821117.1| preprotein translocase subunit YidC [Streptococcus thermophilus LMD-9] gi|55737767|gb|AAV61409.1| cytochrome oxidase biogenesis (Oxa1) family protein, similar to SpoIIIJ [Streptococcus thermophilus LMG 18311] gi|55739685|gb|AAV63326.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] gi|116101775|gb|ABJ66921.1| Preprotein translocase subunit YidC [Streptococcus thermophilus LMD-9] gi|312279125|gb|ADQ63782.1| Preprotein translocase subunit YidC [Streptococcus thermophilus ND03] Length = 268 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 25/206 (12%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-A 414 G+ G+ I++ T+ ++ + PL +Q S+ ++ +QP++ L+ ++ + A Sbjct: 50 FGGSIGLGIIIFTILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYA 109 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LYK H +NP A P+++Q P+ A+Y ++ E+R + W+ DL DP Sbjct: 110 QQELYKEHGVNPYASFLPLIIQFPILMALYGALTRVPELREGS-FLWV-DLGQKDPYF-- 165 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWM-PVVFVFAL 531 I PI+ + F+ ++ A AM ++N M P+ + Sbjct: 166 -----------------ILPILAAAFTFLSTWLTNKVAKDRSAMLIVMNIMLPIFIFWFG 208 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIM 557 + +G+ +YW+ SN +VQ V Sbjct: 209 TQISSGVALYWTVSNAFQVVQILVFN 234 >gi|76787971|ref|YP_330226.1| OxaA-like protein precursor [Streptococcus agalactiae A909] gi|76563028|gb|ABA45612.1| membrane protein [Streptococcus agalactiae A909] Length = 310 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 78/213 (36%), Gaps = 27/213 (12%) Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL-- 427 L + K M +P + + E+ + + Q Q ++ + + ++ Sbjct: 78 LGLYQSWKASYQAEKMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGG 137 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+Q+P F AI+ + P F L Sbjct: 138 IGCLPLLIQMPFFSAIFFAARYT-------------------PGVSSATFLGLNLGQKSL 178 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 I I+ + ++ M+ P + ++ MP++ VF S PA + +YW + Sbjct: 179 TLTVIIAILYFVQSWLSMQGVPDEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGI 238 Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 SI+QQ V + + L ++ ++KN Sbjct: 239 FSIIQQLVTT--YVLKPKLRRKVEEEYTKNPPK 269 >gi|331700391|ref|YP_004336630.1| membrane protein [Pseudonocardia dioxanivorans CB1190] gi|326955080|gb|AEA28777.1| membrane protein insertase, YidC/Oxa1 family [Pseudonocardia dioxanivorans CB1190] Length = 365 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 102/261 (39%), Gaps = 35/261 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ +++ + +A++ ++ + + Q S Sbjct: 1 MLNFIYYPVSAILWFWHKAFGFVFSPTSGVAWALAVVFLVFTLRAILYKPFVGQVRSMRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ QP+I +LR+K+ Q + + M +L +NP+ GC P+L+Q+PVF ++ V+ Sbjct: 61 MQEFQPEIQKLRKKYANDK-QKMTQEMQRLQSEQGVNPVGGCLPVLIQVPVFIGLFHVLR 119 Query: 449 ISLEMRHAPFWGWIKDL---------AAADPTNIFTLFGILPF-----YLPGFMHVGI-W 493 + + +D+ A +I L G + + V I Sbjct: 120 EFKPGKTENYIFNAEDVRSFVDADLFGAKLGASIVPLQGAPSLESLGTTVGQMLVVMIPL 179 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAM----------ILNWMPVVFVFALSSFPAGLIIYWS 543 I+ + I + S + QA +L P+ V P ++ YW Sbjct: 180 MIMAGVFTHITARHSVARQTEVQAANPQSAIMNKLMLYVFPIGVVVGAPFLPLAILFYWV 239 Query: 544 WSNVISIVQQAVIMKMHGAEI 564 +N+ ++ QQ ++ K AE Sbjct: 240 SNNLWTLAQQRIVYKKIDAEE 260 >gi|295106384|emb|CBL03927.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Gordonibacter pamelaeae 7-10-1-b] Length = 256 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 63/231 (27%), Positives = 117/231 (50%), Gaps = 10/231 (4%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +F ++ +FY+ G++G+AI++ TV ++L PL KQ S+ M+ +QP + Sbjct: 1 MWDAFKDLIFQIIQFFYDFCGDWGLAIIIVTVIFRVLISPLMHKQTKSSFQMQKVQPLMK 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E++ K+ PQ Q+ M +LY NPLAGC P+LLQ+P+F A+++V+S R Sbjct: 61 EIQTKYAD-DPQRQQEEMQKLYAEVKFNPLAGCLPMLLQMPIFMALFQVLSEMGA-RTEG 118 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI----QMKMSPPPAD 513 +L P+ + F+ I ++ + + F+ Q + A Sbjct: 119 STYEFYNLV---PSLVERPSEAFAQGFGTFVPYLILMVVFAGATFLPMVLQQMNNKDSAQ 175 Query: 514 KGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + Q +I+ M V ++ S PAG++++W S++I + QQ + M++ Sbjct: 176 RKQMVIMSAVMSVFMLWISWSSPAGVLLFWGASSLIGLGQQQISMRIMKKR 226 >gi|313890878|ref|ZP_07824502.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus pseudoporcinus SPIN 20026] gi|313120776|gb|EFR43891.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus pseudoporcinus SPIN 20026] Length = 309 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 75/210 (35%), Gaps = 31/210 (14%) Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPIL 434 + + +P ++ Q Q ++ K + IN L GC P+L Sbjct: 85 KASYQSEKMAYLKPVFEPINQRMKNATSQEEKFAAQSELMAAQKENGINMLGGMGCLPLL 144 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P F A+Y + + + I DL + I Sbjct: 145 IQMPFFSAMYFAALHTKGI-STSHFLGI-DLGSK---------------------SLILT 181 Query: 495 IIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 I+++ F Q +S + Q ++ MP++ +F + PAG+ +YW SI Sbjct: 182 AIIAILYFFQSWLSMQAVAEEQRAQMKTMMYTMPIMMIFMTMTLPAGVGLYWLVGGFFSI 241 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 +QQ + + + L ++ F N Sbjct: 242 IQQLITT--YFIKPKLRQQIEEEFKNNPPK 269 >gi|226315530|ref|YP_002775426.1| membrane protein OxaA precursor [Brevibacillus brevis NBRC 100599] gi|226098480|dbj|BAH46922.1| membrane protein OxaA precursor [Brevibacillus brevis NBRC 100599] Length = 252 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 113/231 (48%), Gaps = 25/231 (10%) Query: 337 GWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W + P+ L+ L+ N+G+ I++ T+ ++++ PL KQ S+ M+ IQP+ Sbjct: 36 IWDKYFVYPLSWLIKESALLLGNNYGLGILVATIIIRIIVLPLMVKQIKSSKKMQEIQPE 95 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 + ++REK+K PQ Q + +++ +NPLAGC P+L+Q+P+ A Y I + E+ Sbjct: 96 MQKIREKYKN-DPQKAQAETMAMFQKSGVNPLAGCLPMLVQMPILIAFYHAIIRTSEINS 154 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--AD 513 + W+ L DP I PII +++ ++Q KM + Sbjct: 155 Q-TFMWLT-LGQKDPYY-------------------ILPIIAAITTYLQSKMMGQANQGN 193 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 M++ MP++ + + P+ L +YW + N+ +IVQ + + G Sbjct: 194 PQMQMMIIMMPLMILAIAVTLPSALSLYWVYGNLFTIVQTYFLYRDKGKMP 244 >gi|116491815|ref|YP_811359.1| preprotein translocase subunit YidC [Oenococcus oeni PSU-1] gi|116092540|gb|ABJ57694.1| Preprotein translocase subunit YidC [Oenococcus oeni PSU-1] Length = 286 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 99/249 (39%), Gaps = 29/249 (11%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 ++ ++G I++ T+ ++ L PL S+ NM + P + +++ Sbjct: 48 ITGFFANSILGVSKLCGNSYGFGIVIFTLLIRFLILPLMVYSISSSKNMAKVAPLVKKVQ 107 Query: 401 EKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 K+K LQ+ +YK +NP A P+L+Q+PV +A+++ +S + ++ Sbjct: 108 AKYKGKRDRDSMTKLQEETSSIYKEAGVNPYASLLPVLIQLPVLWALFQSVSSTPALKTG 167 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + W++ L + DP + PI +L FI MS K Q Sbjct: 168 S-FFWLQ-LGSPDPYF-------------------VLPIFAALFTFISSWMSTASMGKDQ 206 Query: 517 ---AMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 A + P + +F+ + + L +YW +N +VQ + A + + Sbjct: 207 PGFAKAMPYIFPFIILFSALAVSSALSLYWVATNAFQVVQTFFLQNPFKARAEEKAKELA 266 Query: 573 TFSKNYNSQ 581 + + Sbjct: 267 ELERKKAIK 275 >gi|262278043|ref|ZP_06055830.1| 60 kD inner-membrane protein [alpha proteobacterium HIMB114] gi|262223790|gb|EEY74255.1| 60 kD inner-membrane protein [alpha proteobacterium HIMB114] Length = 142 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 3/140 (2%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID-- 59 N N VA+ LS +++ WQ Y E+ N + + Q + + + ++ Sbjct: 1 MENRNVLVAVILSTLVIMIWQFEYADQYSEQENIQTQIEQVDQNKPIAPSLDKNIKVEKK 60 Query: 60 -DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 R A+ RV +N ++ GSI+L GA DD+ L+ Y++D +++S V LL+P + Sbjct: 61 ISREDAIKDVERVSFENDNIKGSISLTGALIDDVILKNYNVDQTTDSKKVVLLNPKQIND 120 Query: 119 AYFAELDYVSTANNIELPNS 138 +YF E + ++ N N Sbjct: 121 SYFLETGWATSGNETVPDNQ 140 >gi|324989805|gb|EGC21748.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK353] Length = 271 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 53/232 (22%), Positives = 105/232 (45%), Gaps = 29/232 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I +L+EK+ + Sbjct: 46 RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + +LYK +NP A P+ +Q+PV A+++ ++ ++ + W+ +L A Sbjct: 106 TALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525 DPT I P++ +L F +S + G +++ MPV Sbjct: 164 DPTF-------------------ILPLLAALFTFFSTWLSNKALPERNGGMTVMMYLMPV 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 V F +G+ +YW+ SN +VQ ++ + +I + + Sbjct: 205 VIFFFALYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254 >gi|327462709|gb|EGF09031.1| stage III sporulation protein J [Streptococcus sanguinis SK1057] Length = 271 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 105/232 (45%), Gaps = 29/232 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I L+EK+ + Sbjct: 46 RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + +LYK +NP A P+ +Q+PV A+++ ++ ++ + W+ +L A Sbjct: 106 TALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525 DPT I P++ +L F+ +S + G +++ +PV Sbjct: 164 DPTF-------------------ILPLLAALFTFLSTWLSNKALPERNGGMTVMMYLLPV 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 + F +G+ +YW+ SN +VQ ++ + +I + + Sbjct: 205 MIFFFALYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254 >gi|242042503|ref|XP_002468646.1| hypothetical protein SORBIDRAFT_01g049540 [Sorghum bicolor] gi|241922500|gb|EER95644.1| hypothetical protein SORBIDRAFT_01g049540 [Sorghum bicolor] Length = 449 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 93/238 (39%), Gaps = 34/238 (14%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P F +A +L + N+ I LTTV ++L+ PL Q ST Sbjct: 134 PGEVAAAAAESFPPVAALQHLLDAVQSFTGLNWWATIALTTVMIRLVTVPLLINQMKSTM 193 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + ++P+I+ + E+ + S + + +L+ H + PL + +Q P+F + Sbjct: 194 KLNEMRPEIEAINEEMRNSTDPRSMEVGKQKLGELFLRHGVTPLTPLKGLFIQGPIFMSF 253 Query: 444 YKVISISLE----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 + IS +E M+ + W DL D I P++ SL Sbjct: 254 FFAISNMVEKVPSMKGGGMY-WFTDLTTPDNLF-------------------ILPVLTSL 293 Query: 500 SMFIQMKMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + ++++ P K + + V+FV FP + YW SN+ S+V Sbjct: 294 TFLATVELNMQDGMEGNPMAKTMKKVSRFFGVMFVPFTIGFPKAIFFYWVTSNLFSLV 351 >gi|213692302|ref|YP_002322888.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523763|gb|ACJ52510.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 296 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 96/219 (43%), Gaps = 22/219 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQK 413 + GIAIM + +++ PL Q +T M+ +QP+I ++ K+ + +Q+ Sbjct: 3 HSLGIAIMCLVLIIRICLLPLFFSQMRATQRMQVLQPQIQRIQRKYAARKDPRSKEAMQR 62 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRHAPFWGWIKDLAAAD-- 469 ++ L + HN NPL C L+Q P+ +++ + + +A I + A D Sbjct: 63 EIMALQQRHNANPLGSCLLSLIQAPILCSLFYTLQSLPASAAGNAEPLSGIDRVMAGDIE 122 Query: 470 PTNIFTLFGILPF----YLPGFMHVGIWPIIMSLSMFIQMKM-----SPP-PADKGQ--- 516 ++IF + F + +G+ +M L +F + +P D Q Sbjct: 123 SSSIFGVRIADSFGTVVSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQFRT 182 Query: 517 AMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 + + P ++V + + P G+++YW +N+ + Q Sbjct: 183 QKLTAFVFPAIYVVSGGTLPFGVLLYWLTNNLWNFGQTL 221 >gi|94989800|ref|YP_597900.1| OxaA-like protein precursor [Streptococcus pyogenes MGAS10270] gi|94543308|gb|ABF33356.1| 60 kDa inner membrane protein YIDC [Streptococcus pyogenes MGAS10270] Length = 307 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 31/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + + + T +P +++ Q Q ++ + H INPL GC P Sbjct: 83 SWKASYQSEKMTFLKPVFEPINKRIKQASSQEEKMAAQTELMAAQRAHGINPLGGIGCLP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+Q+P F A+Y + + + F DL + + Sbjct: 143 LLIQMPFFSAMYFAAQYTKGVSTSTFMS--IDLGSR---------------------SLV 179 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I++ F Q +S + Q ++ MP++ +F S PAG+ +YW Sbjct: 180 LTAIIAALYFFQSWLSMMAVSEEQREQMKTMMYTMPIMMIFMSFSLPAGVGLYWLVGGFF 239 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 SI+QQ + + + L +++ ++KN Sbjct: 240 SIIQQLITT--YLLKPRLHKQIKEEYAKNPPK 269 >gi|116492484|ref|YP_804219.1| preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC 25745] gi|116102634|gb|ABJ67777.1| Preprotein translocase subunit YidC [Pediococcus pentosaceus ATCC 25745] Length = 316 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 99/258 (38%), Gaps = 40/258 (15%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK----NI 392 + Y + + L G++G+AI+L T V+L+ PL Q + I Sbjct: 36 IYDYLAIPTQHFMNYLSHLLCGSYGLAIILVTFVVRLILLPLMLNQSRKATIQQEKMAFI 95 Query: 393 QPKIDELREKFK----QSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKV 446 QP++ L+ + + + + M+ LYK +N++ GC PI++Q PVF A+Y Sbjct: 96 QPQLKVLQARNQAAKTPEERAAISQEMMALYKDNNVSMTGGIGCLPIIIQFPVFAALYAA 155 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 I S E+ LF + P + I ++ +Q Sbjct: 156 IQYSPELHQ-------------------GLFLGINLAKPSILLAAISFLVY----LLQGW 192 Query: 507 MSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + Q ++ M P++ +F S P GL +Y++ V + +Q I Sbjct: 193 LGTLGVAPEQRKMMRSMMIVSPLMILFFTFSSPGGLGLYFAVGGVFACIQTLAIN---LY 249 Query: 563 EIGLIDRLRSTFSKNYNS 580 + R++ KN Sbjct: 250 RPKIKARIQEEMKKNPPK 267 >gi|332360026|gb|EGJ37840.1| stage III sporulation protein J [Streptococcus sanguinis SK1056] Length = 271 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 110/248 (44%), Gaps = 30/248 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G++ + + + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP Sbjct: 31 YGFWEKLVYFFADTIRFLS-FGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPH 89 Query: 396 IDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 I +L+EK+ + L + +LYK +NP A P+ +Q+PV A+++ ++ ++ Sbjct: 90 IKQLQEKYPGKDMESRTALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VD 148 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP- 511 + W+ +L A DPT I P++ +L F +S Sbjct: 149 FMKTGHFLWL-NLGATDPTF-------------------ILPLLAALFTFFSTWLSNKAL 188 Query: 512 --ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + G +++ MPVV F +G+ +YW+ SN +VQ ++ + +I Sbjct: 189 PERNGGMTVMMYLMPVVIFFFALYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAERE 246 Query: 570 LRSTFSKN 577 + + Sbjct: 247 AKERSERQ 254 >gi|294623037|ref|ZP_06701926.1| membrane protein OxaA 2 [Enterococcus faecium U0317] gi|291597593|gb|EFF28755.1| membrane protein OxaA 2 [Enterococcus faecium U0317] Length = 316 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 92/252 (36%), Gaps = 39/252 (15%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395 + N ++G A++ TV V+++ PL Q T Sbjct: 45 PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453 +L+ + Q M Q+Y+ + ++ GC P+L+Q+P+F A+Y + + Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F+G DL + + I ++ +Q +S Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201 Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + Q + M P + VF S PAG+ +YW V S +Q + M + L + Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259 Query: 570 LRSTFSKNYNSQ 581 + KN Q Sbjct: 260 VAEELKKNPPKQ 271 >gi|329668161|gb|AEB94109.1| stage III sporulation protein J precursor [Lactobacillus johnsonii DPC 6026] Length = 273 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 29/231 (12%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 +W Y + ++ + ++G AI++ T+ V+++ PL S A + +QP Sbjct: 28 NWWDRYIVYYISQFILWIASLVHDSYGWAIIIFTIIVRIILLPLNAISIRSMAKQQKVQP 87 Query: 395 KIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++D LR+K+ Q LQ+ +LYK INP GC P+L+Q+PV +A+Y+ I + Sbjct: 88 QMDALRKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTP 147 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL----SMFIQMKM 507 ++ + W+ DL DP I PI+ ++ S +I Sbjct: 148 QL-QNGRFLWM-DLGRPDPYY-------------------IMPILAAVFTFMSTYISQMS 186 Query: 508 SPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +P + G + + MP++ + + + +YW SN+ +VQ ++ Sbjct: 187 TPQSSQNGMTKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFILQ 237 >gi|148381582|ref|YP_001256123.1| membrane protein OxaA [Clostridium botulinum A str. ATCC 3502] gi|153931466|ref|YP_001385959.1| putative inner membrane protein translocase component YidC [Clostridium botulinum A str. ATCC 19397] gi|153936249|ref|YP_001389366.1| putative inner membrane protein translocase component YidC [Clostridium botulinum A str. Hall] gi|153940502|ref|YP_001393001.1| putative inner membrane protein translocase component YidC [Clostridium botulinum F str. Langeland] gi|168181112|ref|ZP_02615776.1| membrane protein OxaA [Clostridium botulinum NCTC 2916] gi|170756937|ref|YP_001783280.1| putative inner membrane protein translocase component YidC [Clostridium botulinum B1 str. Okra] gi|226951097|ref|YP_002806188.1| membrane protein OxaA [Clostridium botulinum A2 str. Kyoto] gi|148291066|emb|CAL85203.1| membrane protein [Clostridium botulinum A str. ATCC 3502] gi|152927510|gb|ABS33010.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum A str. ATCC 19397] gi|152932163|gb|ABS37662.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum A str. Hall] gi|152936398|gb|ABS41896.1| membrane protein OxaA [Clostridium botulinum F str. Langeland] gi|169122149|gb|ACA45985.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum B1 str. Okra] gi|182668148|gb|EDT80127.1| membrane protein OxaA [Clostridium botulinum NCTC 2916] gi|226842892|gb|ACO85558.1| membrane protein OxaA [Clostridium botulinum A2 str. Kyoto] gi|295320977|gb|ADG01355.1| membrane protein OxaA [Clostridium botulinum F str. 230613] gi|322807969|emb|CBZ05544.1| inner membrane protein translocase component YidC, short form OxaI-like [Clostridium botulinum H04402 065] Length = 217 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 33/239 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + F + + N ++GIAI+L T+ ++LL PL KQ S+ M +QP+I Sbjct: 8 FVQFFKFIHGAVSNVISNPNFSYGIAIILVTLIIRLLILPLNIKQTKSSLRMNELQPEIK 67 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+ K+K PQ L + ++LYK +NPL GC P+L+Q P+F A+Y V + + Sbjct: 68 KLQAKYKN-DPQKLNQKTMELYKEKGVNPLGGCLPLLIQWPIFIALYYVFNTLTGINGIS 126 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + W+KDLA D + ++ + + + AD QA Sbjct: 127 -FLWVKDLAKPD---------------------VVLAVLSGATTYFSGTL-MTTADSSQA 163 Query: 518 MILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + M + + + L++YW +N+I I+Q VIMK L ++ + Sbjct: 164 GQMKSMNIGMSIFMIVISWKLKSALVLYWVINNLIQIIQT-VIMKKM----ELRGKVEA 217 >gi|327460763|gb|EGF07098.1| stage III sporulation protein J [Streptococcus sanguinis SK1] gi|328944626|gb|EGG38787.1| stage III sporulation protein J [Streptococcus sanguinis SK1087] Length = 271 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 52/232 (22%), Positives = 105/232 (45%), Gaps = 29/232 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I +L+EK+ + Sbjct: 46 RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + +LYK +NP A P+ +Q+PV A+++ ++ ++ + W+ +L A Sbjct: 106 TALAEETQKLYKEMGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525 DPT I P++ +L F +S + G +++ MPV Sbjct: 164 DPTF-------------------ILPLLAALFTFFSTWLSNKALPERNGGMTVMMYLMPV 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 + F +G+ +YW+ SN +VQ ++ + +I + + Sbjct: 205 MIFFFALYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254 >gi|288906262|ref|YP_003431484.1| hypothetical protein GALLO_2078 [Streptococcus gallolyticus UCN34] gi|306832308|ref|ZP_07465462.1| stage III sporulation protein J [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325979273|ref|YP_004288989.1| hypothetical protein SGGBAA2069_c20730 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732988|emb|CBI14569.1| conserved hypothetical membrane protein [Streptococcus gallolyticus UCN34] gi|304425747|gb|EFM28865.1| stage III sporulation protein J [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325179201|emb|CBZ49245.1| unnamed protein product [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 271 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 107/255 (41%), Gaps = 27/255 (10%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ + F + ++ G G+ I+L T+ ++ + PL Q S M+ Sbjct: 25 EVTASSTNGWDQIVYFFAKAIQWLSINGRIGVGIVLFTIIIRAIMMPLYNMQIKSGQKMQ 84 Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++QP++ +L+EK+ L + LYK + +NP A P+++Q+P+ A+Y+ + Sbjct: 85 DLQPELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVVQLPILMALYQAL 144 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ + WI+ L+ DP I P++ +L F+ + Sbjct: 145 TRVAFLK-TGTFLWIE-LSKPDPYF-------------------ILPVLAALFTFLSSWL 183 Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + A + ++ MP++ F +G+++YWS S + Q ++ Sbjct: 184 TNKAAREKNIAMTVMTYVMPIMIFFMSFRLASGVVLYWSVSYAFQVFQILLLNNPFKIIA 243 Query: 565 GLIDRLRSTFSKNYN 579 ++ ++ + Sbjct: 244 KRLEEEQAEKERAAK 258 >gi|295103712|emb|CBL01256.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Faecalibacterium prausnitzii SL3/3] Length = 353 Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 115/293 (39%), Gaps = 49/293 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +FY ++ P+ +M + Y L+ N+G I+L T+ + ++ PL Q S A M QP Sbjct: 1 MNFFYILSGPLGYVMEWIYKLLPNYGWDIILFTLLINIVKIPLQTSQQKSMAKMSAFQPM 60 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-MR 454 I E++ K+K P+ Q+ +++L + P AGC P+LL V F + V+ LE + Sbjct: 61 IAEIQTKYKN-KPEKQQEELMKLQQDFGYKPTAGCVPMLLNFLVMFGVIGVVYNPLERIF 119 Query: 455 H----------------------------------APFWGWIKDLAAADPTNIFTLFGIL 480 H A G + A I + Sbjct: 120 HISAAALASAGEALTAAGISFTAITRDTNIIAEVVAGNSGVLGCFTAQQIATITEFSQHM 179 Query: 481 PFYLPGFMHVG--------IWPIIMSLSMFIQMKMSP-PPADKGQAMI---LNWMPVVFV 528 F+ + + P++ ++MF+ +S + Q + + MP++++ Sbjct: 180 NFFGIDLTRIPKLGLSLDIVLPLLSVITMFLSTHISMKASGQQMQGSMKLTMYMMPLMYL 239 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 F ++P +Y+ SN++ Q +M+ + + + + + Sbjct: 240 FFCFTYPLAFSLYYVISNIVMTAQTQ-VMRKFYDPEKMRKEVEAEIAAKRKQE 291 >gi|307297278|ref|ZP_07577084.1| membrane protein insertase, YidC/Oxa1 family [Thermotogales bacterium mesG1.Ag.4.2] gi|306916538|gb|EFN46920.1| membrane protein insertase, YidC/Oxa1 family [Thermotogales bacterium mesG1.Ag.4.2] Length = 448 Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 81/402 (20%), Positives = 158/402 (39%), Gaps = 35/402 (8%) Query: 164 NNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGR-IMRHKPQTATNTFGVQEGFIA 222 ++ ++ D +F + T + G I+ + + +F + Sbjct: 64 EFYVYNESLGKDGFNVFDVEGTELLPTSFSYDKDEEGNVIVSFNYEQGSKSFIILNSPYY 123 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 VE ++ + ++ N +G Y+ + S + + + Sbjct: 124 DF----RVELNFNQKIEVALPFISYQNQTIGPDSSYYLTYDKFSGQKTLFAITAMQGTFK 179 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 + + I + + A + + I +D +F +I Sbjct: 180 FQRYESETGRGILESFAGPMRLIHMRQALPEHYDAIVKDLQDFG--------GVTFFSWI 231 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 + + + Y GNFG A++L T+ + + +PL Q S M+ +QP+++++++K Sbjct: 232 YHGIVYFLFWLYQWSGNFGWALILFTIVTRFILYPLYHIQTKSMLMMRMLQPEVEKIKKK 291 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE-MRHAPFWGW 461 +K Q Q+AM+ LYK NP +GC PILLQ+PV +Y I E M + P + Sbjct: 292 YKDPRKQ--QEAMMALYKEKGYNPASGCLPILLQLPVLILLYNAIRYFSEVMAYTPGFLI 349 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 KDL+ +PF + + VGI+ ++ D A Sbjct: 350 WKDLSV------GNFVLNIPFIIIT-VVVGIFSSLL------------TAQDARSARSGV 390 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M V+F ++FP+GL++YW+ +V+ V+ K +G + Sbjct: 391 IMQVIFPILFATFPSGLLLYWTTQSVLQFFISWVVYKRNGIK 432 >gi|153956505|ref|YP_001397270.1| inner membrane protein translocase component YidC [Clostridium kluyveri DSM 555] gi|219856808|ref|YP_002473930.1| hypothetical protein CKR_3465 [Clostridium kluyveri NBRC 12016] gi|146349363|gb|EDK35899.1| OxaA [Clostridium kluyveri DSM 555] gi|219570532|dbj|BAH08516.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 221 Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 27/230 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + F + S N ++GIAI+L T+ ++++ PL KQ S+ M IQP++ Sbjct: 8 FVQFFEFLHRNVTSLIPNQNISYGIAIILMTLIIRIIILPLGVKQLKSSLIMNEIQPEVK 67 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+EK+ + PQ Q+ M++LYK +P +GC P+L+Q P+ A+Y V + + Sbjct: 68 KLQEKY-KKDPQRAQQEMMKLYKEKGASPFSGCLPLLIQWPILIALYYVFNNLSGINGVS 126 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + WI DLA D I+ ++ ++ + QA Sbjct: 127 -FLWISDLAKRDIF---------------------LAILSGITTYLSTYFMMSSNNSEQA 164 Query: 518 MILNWMPV----VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M + VF F + L++YW SN+I I Q VI ++ + Sbjct: 165 KQTQTMNIGMSGFMVFMSLGFKSALVLYWVVSNLIQIAQTLVIKRIGSKK 214 >gi|306834432|ref|ZP_07467546.1| stage III sporulation protein J [Streptococcus bovis ATCC 700338] gi|304423418|gb|EFM26570.1| stage III sporulation protein J [Streptococcus bovis ATCC 700338] Length = 271 Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 108/255 (42%), Gaps = 27/255 (10%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ + F + ++ G G+ I+L T+ ++ + PL Q S M+ Sbjct: 25 EVTASSTNGWDQIVYFFAKAIQWLSINGRIGVGIVLFTIIIRAIMMPLYNMQIKSGQKMQ 84 Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++QP++ +L+EK+ L + LYK + +NP A P+++Q+P+ A+Y+ + Sbjct: 85 DLQPELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVVQLPILMALYQAL 144 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ + WI+ L+ DP I P++ +L F+ + Sbjct: 145 TRVAFLK-TGTFLWIE-LSKPDPYF-------------------ILPVLAALFTFLSSWL 183 Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + A + ++ MP++ F +G+++YWS S + Q ++ Sbjct: 184 TNKAAREKNIAMTVMTYVMPIMIFFMSFRLASGVVLYWSVSYAFQVFQILLLNNPFKIIA 243 Query: 565 GLIDRLRSTFSKNYN 579 ++ ++ ++ Sbjct: 244 KRLEEEQAEKERSAK 258 >gi|94985665|ref|YP_605029.1| 60 kDa inner membrane insertion protein [Deinococcus geothermalis DSM 11300] gi|94555946|gb|ABF45860.1| 60 kDa inner membrane insertion protein [Deinococcus geothermalis DSM 11300] Length = 526 Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 95/496 (19%), Positives = 165/496 (33%), Gaps = 66/496 (13%) Query: 74 KNPSLIGSINLKGAQFDDLNLRGY------HLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 + N +G ++ Y L + N Sbjct: 53 TSNLQDVVFNARGEVI-GWYVKSYAGTPFIKKRADGTYDFSALKNTKTIVNMVGDRKALA 111 Query: 128 STANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN-ILFERTISLDEHYLFKIVDTV 186 TA + P + VF+ N +T+ L V T Sbjct: 112 VTAEGVLDPAQPAQTAAPQLTQNLAQNRQEAVFRYTQNGATVTKTVVLHPRNFKVDVQTT 171 Query: 187 TNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFH 246 G P G Q + G ++ +Y+ +++ H Sbjct: 172 VEGGPQTYTMLFPGLGKADNPSVKAVPVGGQPATVQGSGTLTVPNIQYAALQEKPSQIAH 231 Query: 247 ESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTN 306 I + + S + G + Sbjct: 232 ---------------ALIVRPQAGTTANATLTGGEQGLIAVHLSGPSSLEVYGGKNELVH 276 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 +G P + +F I+ + LM Y LVGN+G+ I+L Sbjct: 277 LYQSGYLNLPGLFQPN---------------FFGQISLLIVKLMEGLYKLVGNWGLVIVL 321 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTH 422 T+ ++L+ +PL + Q +TA M+ +QPKI E+++K+K + +Q M QLY+ H Sbjct: 322 LTILLRLIMWPLMQAQGRTTARMQVMQPKIKEIQDKYKDKRDIESQRAMQMEMAQLYREH 381 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 N NP GC+ L PV A++ I E + W+ DLA DP I L + Sbjct: 382 NFNPA-GCFSTFLPFPVLIALWSTIRN-FEF--DSGFLWLPDLAVPDPFYILALIYLC-- 435 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 +++G ++ + +P D + + ++F++ +FPAG+ IY Sbjct: 436 -----VNIGQL--------YVMTRKNP---DMFRQQAFIY--IIFLYFALTFPAGVTIYI 477 Query: 543 SWSNVISIVQQAVIMK 558 S +I I QQ +I + Sbjct: 478 ILSTLIGIGQQILINR 493 >gi|10122033|gb|AAG13422.1|AC051634_3 putative Oxa1 protein [Oryza sativa Japonica Group] Length = 487 Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 96/242 (39%), Gaps = 34/242 (14%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E+ +F + ++ Y + G N+ I L TV ++ PL Q +T + Sbjct: 113 EVAAAAADSFFPVAALQHVIDYIHTFTGLNWWACIALATVLIRSATVPLLVNQLKATQKL 172 Query: 390 KNIQPKIDELREKF--KQSPPQVLQKAMI-QLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 I+P+++ ++E+ KA + L++ H ++P +L+Q P+F + + Sbjct: 173 NAIRPEMEAIKEEMNAMDPKSAKEGKAKMTALFQKHGVSPFTPLKGLLIQGPIFMSFFFA 232 Query: 447 ISISLE----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 I ++ M+ W DL DP I P++ +L Sbjct: 233 IRNMIDKVPSMKGGGS-LWFTDLTTPDPLY-------------------ILPVLTALIFL 272 Query: 503 IQMKMS---PPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + ++++ + + N+ M V+ V SF G+ YW SN+ ++ VI Sbjct: 273 VTVELNLQEGMEGNPMARKMKNFSRGMAVLTVPFTMSFAKGIFCYWITSNLFTLTYGFVI 332 Query: 557 MK 558 + Sbjct: 333 RR 334 >gi|308068957|ref|YP_003870562.1| membrane protein oxaA 2 precursor [Paenibacillus polymyxa E681] gi|305858236|gb|ADM70024.1| Membrane protein oxaA 2 precursor [Paenibacillus polymyxa E681] Length = 277 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 37/241 (15%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----I 392 + +++ P+ L+ G+FG+AIM T V+L PL +Q + MK + Sbjct: 47 FNHYVVFPLSWLIQQLAQWFGGSFGLAIMTLTFIVRLALLPLMMRQTRAQQGMKRKMSVM 106 Query: 393 QPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVI 447 QP +D +++K++ Q +Q+ M+ LYK H NPL GC PIL+Q+P+ +Y I Sbjct: 107 QPDLDRIKKKYENKKDTTSQQSMQQEMMSLYKEHQFNPLNIGCLPILIQLPILSGMYTAI 166 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++ E+ + W + L D I I++++ Q K+ Sbjct: 167 RLTPELASHS-FLWFR-LGQPD---------------------WILAIVVAVVYLAQAKL 203 Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 S Q M P++ + PA + +YW+ S ++Q + + E Sbjct: 204 SQLQMTPDQRKQFAIMGYLSPIMMAVFSFNAPAAMPLYWTVSGTFLLLQSLWFRRRYPIE 263 Query: 564 I 564 Sbjct: 264 E 264 >gi|306832024|ref|ZP_07465179.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978972|ref|YP_004288688.1| inner membrane protein oxaA [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|304425950|gb|EFM29067.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178900|emb|CBZ48944.1| Inner membrane protein oxaA [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 306 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 84/244 (34%), Gaps = 35/244 (14%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 + + + ++ + L + K + M ++P + + E+ + + Sbjct: 51 YFANNVGLGFGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYLKPIFEPINERMRNA 110 Query: 407 PPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 Q Q ++ K + IN L GC P+L+Q+P F A+Y + Sbjct: 111 TTQEEKLAAQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAAQYT---------- 160 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-- 518 + F + + ++ F Q +S + Q Sbjct: 161 ---------QGVSESTFLGIDLGTRSIPLTAVIAVLY----FFQSWLSMQGVAEEQRAAM 207 Query: 519 --ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + MP++ VF S PA +++YW SI+QQ + M + L ++ F K Sbjct: 208 KGTMYVMPLMMVFFGMSMPASVLLYWLVGGFFSIIQQLITM--FIIKPRLRKKIAVEFEK 265 Query: 577 NYNS 580 N Sbjct: 266 NPPK 269 >gi|322412738|gb|EFY03646.1| hypothetical protein SDD27957_10315 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 269 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 53/233 (22%), Positives = 110/233 (47%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ + +F + + G+ G+ I+L T+ ++LL PL Q S+ M+ Sbjct: 24 EVTAQSTSGWDQLVYLFARAIQWLSFDGSIGVGIILFTLIIRLLLMPLFNMQIRSSQKMQ 83 Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +IQP++ EL++K+ L + LYK + +NP A P+L+Q+PV A+++ + Sbjct: 84 DIQPELRELQKKYAGKDTETRMKLAEESQALYKKYGVNPYASLMPLLIQMPVMIALFQAL 143 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ + W++ LA D H+ I P++ +L F+ + Sbjct: 144 TRVPFLK-TGTFLWVE-LAQHD-------------------HLYILPVLAALFTFLSTWL 182 Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + A + +++ MP++ F + +G+++YW+ SN +VQ ++ Sbjct: 183 TNLAAREKNIMMTIMIYVMPLMIFFMGFTLASGVVLYWTVSNAFQVVQLLLLN 235 >gi|195977384|ref|YP_002122628.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974089|gb|ACG61615.1| membrane protein OxaA 1 precursor [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 269 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ + F + + G+ GI I+L T+ ++LL PL Q S M+ Sbjct: 24 EVTAQSSSSWEQLVYFFAKAIQWLSFDGSTGIGIILFTIMIRLLLLPLFNMQIKSGQKMQ 83 Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +IQP++ L++K+ L + LYK + +NP P+L+Q+PV FA+++ + Sbjct: 84 DIQPELKALQKKYAAKDTATRMKLAEESQALYKKYGVNPYMSLLPLLIQMPVMFALFQSL 143 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S +R + W++ LA D H+ I PI+ ++ F+ + Sbjct: 144 SRVAFLR-EGTFLWVE-LARHD-------------------HLFILPILAAVFTFLSTWL 182 Query: 508 SPPPADKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + A + AM + MP+ F + +G+++YW+ SN +VQ + Sbjct: 183 TNLAAREKTAMITIMTYVMPIFIFFMGFNLASGVVLYWAVSNAFQVVQLLLFN 235 >gi|168187281|ref|ZP_02621916.1| membrane protein OxaA [Clostridium botulinum C str. Eklund] gi|169294774|gb|EDS76907.1| membrane protein OxaA [Clostridium botulinum C str. Eklund] Length = 246 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 26/238 (10%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + F + S N ++G+ I++ T+ ++L+ FPL KQ S M IQP++ Sbjct: 22 FIQFFQVMHNWVHSVVTNPNISYGLTIIIVTIIIRLVLFPLNYKQIKSQVAMNEIQPELK 81 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+ K+K PQ Q+ M++LYK + +NPL GC P+L+Q P+ A+Y V Sbjct: 82 KLQNKYKN-DPQKQQQEMMKLYKEYGVNPLGGCLPLLIQWPILIALYYVF---------- 130 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMH-----VGIWPIIMSLSMFIQM-KMSPPP 511 +L+ DP+ F L P + I P++ L ++ M+ Sbjct: 131 -----SNLSKIDPSISNVTFLGLKLMNPAVLSPSQWYTWILPLLSGLLTYLSTAMMTSKN 185 Query: 512 ADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 AD Q M+ +M + + F L++YW +++ I Q V + Sbjct: 186 ADSAQVKQTRMMSGFMTLFITYMSFKFSTALVLYWVTNSLFQIGQTLVTQHSQNKKKE 243 >gi|163915277|ref|NP_001106402.1| oxidase (cytochrome c) assembly 1-like [Xenopus (Silurana) tropicalis] gi|156230714|gb|AAI52066.1| LOC100127562 protein [Xenopus (Silurana) tropicalis] Length = 425 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 91/256 (35%), Gaps = 53/256 (20%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-- 417 + AI+ TV ++L FPL K A + N P+I + + ++ + + Sbjct: 136 WWGAIVTGTVLARILVFPLIVKGQREAAKLNNHMPQISSMTNRMNEAKQSGNKFEFSKAY 195 Query: 418 -----LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAA 468 K H++NPL G L+Q P+F + + + + + W DL AA Sbjct: 196 SDLTLYQKKHDVNPLRGFLVPLVQAPIFISFFVALRQMSYLPVPSMQSGGLWWFTDLTAA 255 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILN----WM 523 DP I P+ ++ +M+ +++ D I+ M Sbjct: 256 DPFY-------------------ILPLTVTCTMWGVLELGAESGVDNPNLKIMKTVFRVM 296 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAV-----IMKMHGAEIGLI----------- 567 P++ + +FP + YW SNV S+ Q + + K + Sbjct: 297 PLIILPLTINFPTAVFTYWVTSNVFSLAQVSFLRIPAVRKKLKIPERIKHDASALPPQEG 356 Query: 568 --DRLRSTFSKNYNSQ 581 L+ + +Q Sbjct: 357 FIKNLKKGWKNAQMAQ 372 >gi|268320270|ref|YP_003293926.1| hypothetical protein FI9785_1808 [Lactobacillus johnsonii FI9785] gi|262398645|emb|CAX67659.1| conserved membrane protein [Lactobacillus johnsonii FI9785] Length = 291 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 106/231 (45%), Gaps = 29/231 (12%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 +W Y + ++ + ++G AI++ T+ V+++ PL S A + +QP Sbjct: 46 NWWDRYIVYYISQFILWIASLVHDSYGWAIIIFTIIVRIILLPLNAISIRSMAKQQKVQP 105 Query: 395 KIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++D LR+K+ Q LQ+ +LYK INP GC P+L+Q+PV +A+Y+ I + Sbjct: 106 QMDALRKKYPGKDVESRQKLQEETSKLYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTP 165 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL----SMFIQMKM 507 ++ + W+ DL DP + PI+ ++ S +I Sbjct: 166 QL-QNGRFLWM-DLGRPDPYYLM-------------------PILAAVFTFMSTYISQMS 204 Query: 508 SPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +P + G + + MP++ + + + +YW SN+ +VQ ++ Sbjct: 205 TPQSSQNGMTKGMTYLMPLIIGVSAIGIQSAISLYWVISNLFQVVQTFILQ 255 >gi|288906005|ref|YP_003431227.1| membrane protein [Streptococcus gallolyticus UCN34] gi|288732731|emb|CBI14305.1| putative conserved membrane protein [Streptococcus gallolyticus UCN34] Length = 306 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 84/244 (34%), Gaps = 35/244 (14%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 + + + ++ + L + K + M ++P + + E+ + + Sbjct: 51 YFANNVGLGFGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYLKPIFEPINERMRNA 110 Query: 407 PPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 Q Q ++ K + IN L GC P+L+Q+P F A+Y + Sbjct: 111 TTQEEKLAAQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAAQYT---------- 160 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-- 518 + F + + ++ F Q +S + Q Sbjct: 161 ---------QGVSESTFLGIDLGTRSIPLTAVIAVLY----FFQSWLSMQGVAEEQRAAM 207 Query: 519 --ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + MP++ VF S PA +++YW SI+QQ + M + L ++ F K Sbjct: 208 KGTMYVMPLMMVFFGMSMPASVLLYWLVGGFFSIIQQLITM--FIIKPRLRKKIAVEFEK 265 Query: 577 NYNS 580 N Sbjct: 266 NPPK 269 >gi|260654889|ref|ZP_05860377.1| membrane protein insertase, YidC/Oxa1 family [Jonquetella anthropi E3_33 E1] gi|260630391|gb|EEX48585.1| membrane protein insertase, YidC/Oxa1 family [Jonquetella anthropi E3_33 E1] Length = 261 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 121/247 (48%), Gaps = 23/247 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + +K ++ +S Y++VG++G AI++ T+ ++ + PL KKQ VS M+ +QP+I Sbjct: 5 WAAASKALYDFLSLIYSVVGSWGWAILILTLIIRAVLHPLNKKQMVSMQKMQKLQPRIKV 64 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+EK+ + L + + LY+ + +NP +GC P+L+Q+P+ +++V+ S A F Sbjct: 65 LQEKYAN-DRETLGRETMALYRENKVNPASGCLPLLIQLPILILLFQVLRTS-SFGGASF 122 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHV--------------------GIWPIIMS 498 +G + + T F GF + I++ Sbjct: 123 FGISLEGSVYTQLAQATGFAFNNPSELGFFALMSHVFKNPSGLSNVLIWLPNLALVILIC 182 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++Q KMS + A +L +MP++ F S P G+ +YW+ S++++ +QQ +++ Sbjct: 183 YLTWLQQKMSSAGNQQMGA-MLVFMPILMAFICLSLPGGVALYWAASSLLAAIQQIQVVR 241 Query: 559 MHGAEIG 565 E Sbjct: 242 KVENEEK 248 >gi|260558940|ref|ZP_05831127.1| inner membrane protein [Enterococcus faecium C68] gi|293559780|ref|ZP_06676300.1| membrane protein OxaA 2 [Enterococcus faecium E1162] gi|314950195|ref|ZP_07853480.1| putative OxaA-like protein [Enterococcus faecium TX0082] gi|260075048|gb|EEW63363.1| inner membrane protein [Enterococcus faecium C68] gi|291606263|gb|EFF35677.1| membrane protein OxaA 2 [Enterococcus faecium E1162] gi|313643505|gb|EFS08085.1| putative OxaA-like protein [Enterococcus faecium TX0082] Length = 316 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 93/252 (36%), Gaps = 39/252 (15%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395 + N ++G A++ TV V+++ PL Q T Sbjct: 45 PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453 +L+ + Q M Q+Y+ + ++ GC P+L+Q+P+F A+Y + + Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F+G DL + + +I ++ +Q +S Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVVIAGVAYLLQGYISTIGIP 201 Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + Q + M P + VF S PAG+ +YW V S +Q + M + L + Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259 Query: 570 LRSTFSKNYNSQ 581 + +N Q Sbjct: 260 VAEELKQNPPKQ 271 >gi|332983465|ref|YP_004464906.1| membrane protein insertase, YidC/Oxa1 family [Mahella australiensis 50-1 BON] gi|332701143|gb|AEE98084.1| membrane protein insertase, YidC/Oxa1 family [Mahella australiensis 50-1 BON] Length = 238 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 114/233 (48%), Gaps = 25/233 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + + ++ + +VG++ AI++ T+ ++ + PL Q ST M IQPK+ EL + Sbjct: 1 MTAALASILEWINGMVGSYAYAIIIFTILIRTVLAPLDIMQRRSTQKMNAIQPKLKELEK 60 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP---- 457 K+ Q LQ+ ++LY+ INPL GC P ++Q+ + F ++ VI + P Sbjct: 61 KY-GKDKQKLQQKQMELYQKEKINPLGGCLPAIVQMVLLFMLFAVIRQLVGTPDNPGALV 119 Query: 458 --FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--- 512 + WIKD++ D + T G + Y I P + ++ ++ MK+S PP Sbjct: 120 GQSFLWIKDISLPDAFWVTTKTGEINGYF-------ILPALSGITQYLYMKLSMPPQTSS 172 Query: 513 ----DKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + Q + + P+ ++ S++ + +YW SN+ +V + +I+K Sbjct: 173 AQQQNPMGCSQETMNIFFPLFSLYITSTYASAFALYWVVSNIFQVV-EFLIIK 224 >gi|251783353|ref|YP_002997658.1| membrane protein oxaA 1 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391985|dbj|BAH82444.1| membrane protein oxaA 1 precursor [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 271 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 53/233 (22%), Positives = 110/233 (47%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ + +F + + G+ G+ I+L T+ ++LL PL Q S+ M+ Sbjct: 26 EVTAQSTSGWDQMVYLFARAIQWLSFDGSIGVGIILFTLIIRLLLMPLFNMQIKSSQKMQ 85 Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +IQP++ EL++K+ L + LYK + +NP A P+L+Q+PV A+++ + Sbjct: 86 DIQPELRELQKKYAGKDTETRMKLAEESQALYKKYGVNPYASLMPLLIQMPVMIALFQAL 145 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ + W++ LA D H+ I P++ +L F+ + Sbjct: 146 TRVPFLK-TGTFLWVE-LAQHD-------------------HLYILPVLAALFTFLSTWL 184 Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + A + +++ MP++ F + +G+++YW+ SN +VQ ++ Sbjct: 185 TNLAAREKNIMMTIMIYVMPLMIFFMGFTLASGVVLYWTVSNAFQVVQLLLLN 237 >gi|125623406|ref|YP_001031889.1| OxaA-like protein precursor [Lactococcus lactis subsp. cremoris MG1363] gi|124492214|emb|CAL97143.1| Membrane protein oxaA 2 precursor [Lactococcus lactis subsp. cremoris MG1363] gi|300070153|gb|ADJ59553.1| OxaA-like protein precursor [Lactococcus lactis subsp. cremoris NZ9000] Length = 320 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 97/276 (35%), Gaps = 39/276 (14%) Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--- 375 H + +P + + + + NL +G I+ T+ ++ L Sbjct: 27 THVVDGVRVPTEAATHGITYNLLVRPMSAFVDLFANNLHLGYGWGIIFVTLIIRFLILPL 86 Query: 376 -----FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--A 428 + Q P + L++ Q+A++ K + IN L Sbjct: 87 GLNQAYKSTYMQEKMAYLAPVFAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSI 146 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+L+Q P F A+Y + + + + F+G +P P Sbjct: 147 GCLPMLIQWPFFIALYNAAAYTTGISSSTFYG-------------------IPLGHPSI- 186 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWM-PVVFVFALSSFPAGLIIYWSW 544 + II + FIQ +S Q + M P + V PAG+ +YW+ Sbjct: 187 ---VLVIISGVLYFIQTWISTLSMTPEQKKSGMAMLIMSPAMIVVFSFMSPAGVALYWAV 243 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 + ++QQ +I + + + R+ F+KN Sbjct: 244 GGFVIVIQQVIITFIM--KPRMRRRIDEEFTKNPPK 277 >gi|307105163|gb|EFN53413.1| hypothetical protein CHLNCDRAFT_136603 [Chlorella variabilis] Length = 496 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 40/241 (16%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA------------------NMKNIQPKIDEL 399 ++G +I+ T +KL FPL KKQ N++ ++P+ID + Sbjct: 165 YSYGWSIVALTALIKLATFPLTKKQARPGPGPPAPFRPCLPPRVESALNVQRLKPQIDAI 224 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--SISLEMRHAP 457 +E++ + +Q+ LY+ ++PLAGC P L IP+F +Y+ + + + + Sbjct: 225 KEQYGDNKD-AVQRETSALYEKAGVDPLAGCLPSLATIPIFIGLYRSLSDFSTQQEAGSA 283 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-----------IWPIIMSLSMFIQMK 506 + WI LA + LP V P+ + +S I Sbjct: 284 AFYWIPSLAGPTSVAAQKAGSGTAWLLPLVDGVPPIGWDLASRYLALPVALYISNAI--- 340 Query: 507 MSPPPADKGQAMIL-----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++PP D A +P++ + + PAGL +Y+ + V + QQ + K+ G Sbjct: 341 ITPPQTDDSGAAKFTQNLVKVLPLMIGWFALNVPAGLSLYYFSNTVFTTAQQVYLKKLGG 400 Query: 562 A 562 A Sbjct: 401 A 401 >gi|322386704|ref|ZP_08060329.1| ParB/SpoJ family partitioning protein [Streptococcus cristatus ATCC 51100] gi|321269377|gb|EFX52312.1| ParB/SpoJ family partitioning protein [Streptococcus cristatus ATCC 51100] Length = 273 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 29/253 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ + F+ F M F + G+ GI I+L T+ ++ + P+ + Q S+ M+ Sbjct: 27 EVTANSSDFWEKLVYFFAEMIQFLSFNGSTGIGIILFTLIIRTVLLPVFQFQTTSSRKMQ 86 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +QP I +L+EK+ L + +LYK +NP A P+ +Q+PV A+++ + Sbjct: 87 EVQPHIKKLQEKYPGKDMDSRAALAEETSKLYKEMGVNPYAAFLPLFIQMPVLVALFQAL 146 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + +E + W+ +L DPT I PI+ +L F + Sbjct: 147 TR-VEFLKTGHFLWL-NLGTTDPTF-------------------ILPILAALFTFFSTWL 185 Query: 508 SPPPADKGQ---AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 S + A++ MPV+ F +G+ +YW+ SN + Q ++ + +I Sbjct: 186 SNKALPEKNGGTAVMTYLMPVLIFFFAVYAASGVALYWTVSNAYQVGQTLLL--SNPFKI 243 Query: 565 GLIDRLRSTFSKN 577 ++ + Sbjct: 244 IAEREAKAKAERQ 256 >gi|116511365|ref|YP_808581.1| OxaA-like protein precursor [Lactococcus lactis subsp. cremoris SK11] gi|116107019|gb|ABJ72159.1| Preprotein translocase subunit YidC [Lactococcus lactis subsp. cremoris SK11] Length = 320 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 97/276 (35%), Gaps = 39/276 (14%) Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--- 375 H + +P + + + + NL +G I+ T+ ++ L Sbjct: 27 THVVDGVRVPTEAATHGITYNLLVRPMSAFVDLFANNLHLGYGWGIIFVTLIIRFLILPL 86 Query: 376 -----FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--A 428 + Q P + L++ Q+A++ K + IN L Sbjct: 87 GLNQAYKSTYMQEKMAYLAPVFAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSI 146 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+L+Q P F A+Y + + + + F+G +P P Sbjct: 147 GCLPMLIQWPFFIALYNAAAYTTGISSSTFYG-------------------IPLGHPSI- 186 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWM-PVVFVFALSSFPAGLIIYWSW 544 + II + FIQ +S Q + M P + V PAG+ +YW+ Sbjct: 187 ---VLVIISGVLYFIQTWISTLSMTPEQKKSGMAMLIMSPAMIVVFSFMSPAGVALYWAV 243 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 + ++QQ +I + + + R+ F+KN Sbjct: 244 GGFVIVIQQVIITFIM--KPRMRRRIDEEFTKNPPK 277 >gi|241999556|ref|XP_002434421.1| cytochrome oxidase biogenesis protein, putative [Ixodes scapularis] gi|215497751|gb|EEC07245.1| cytochrome oxidase biogenesis protein, putative [Ixodes scapularis] Length = 426 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 51/227 (22%), Positives = 82/227 (36%), Gaps = 31/227 (13%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + ++ G I L TV VKLL FP K +T +M N P++ Sbjct: 123 WAPSGMVQHCLDLLHSSTGLPWWATIALGTVVVKLLVFPAILKGQKNTIHMNNHLPQMQV 182 Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 L+ K ++ ++ K INPL ++Q PVF + + + Sbjct: 183 LQAKLSEARSSVFVLDSARYANELMLFMKEKQINPLKNMIIPMVQAPVFISFFFALRGMA 242 Query: 452 EMRHAPF----WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + F W DL DP +LP V + Sbjct: 243 NLPMESFKTGGMLWFTDLTIPDPYC------LLPLITIRLSRVVALGAESGV-------- 288 Query: 508 SPPPADKGQ--AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 AD Q + MP+V +FPA L+ YW+ SN+ ++ Q Sbjct: 289 ---RADNLQWTRYVFRAMPIVIFPFTMNFPAALLCYWATSNMFTLAQ 332 >gi|320161691|ref|YP_004174916.1| hypothetical protein ANT_22900 [Anaerolinea thermophila UNI-1] gi|319995545|dbj|BAJ64316.1| hypothetical membrane protein [Anaerolinea thermophila UNI-1] Length = 276 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 62/238 (26%), Positives = 115/238 (48%), Gaps = 21/238 (8%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK--IDE 398 I +L+ + L NFGIAI+L T+ ++L+ PL Q + M +Q E Sbjct: 6 IIQPFTNVLLLIYSYLGQNFGIAIILFTLLIRLITHPLMVSQIKGSQKMMELQNHPRYKE 65 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-----EM 453 L+EK+K Q LQ+ +L + INP A C P+L+Q P+ +Y+ + ++ ++ Sbjct: 66 LQEKYKN-DRQKLQEEQAKLIQELKINPFASCLPLLIQFPIIIGLYQSLYKAMPNTPHDL 124 Query: 454 RHAPFWGW-IKDLAAADPTNIFTLFGILP-----FYLPGFMHVGIWPIIMSLSMFIQMKM 507 + + D+ A P N L+ L + + + I+++L+ +IQ ++ Sbjct: 125 LNLTRILYSFVDINAILPINNQFLWMDLSQPERLYLPFLPFGIPVLAIVVALTTYIQGRL 184 Query: 508 -SPPPADKGQAMILN------WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +PPP++ + +MP + + + +GL +Y+ SNVI I+Q A++ K Sbjct: 185 ITPPPSNPNDQTAMMSGMMNLYMPFLMGYMGLTLASGLSLYFIVSNVIGILQYALLGK 242 >gi|331265592|ref|YP_004325222.1| preprotein translocase subunit YidC1 [Streptococcus oralis Uo5] gi|326682264|emb|CBY99881.1| preprotein translocase subunit YidC1 [Streptococcus oralis Uo5] Length = 277 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 108/256 (42%), Gaps = 29/256 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ D F+ F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ Sbjct: 31 DITADSTDFWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQMVASRKMQ 90 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L + M ++YK I + WPIL+Q+PV A+++ + Sbjct: 91 EAQPRIKALREQYPGRDMESRTKLDQEMRKVYKELGIKHSSSLWPILIQMPVLLALFQAL 150 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L D + + PI+ ++ F+ + Sbjct: 151 SR-VDFLKTGHFLWI-NLGGVDTSF-------------------VLPILAAVFTFLSSWL 189 Query: 508 SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--KMHGA 562 S + ++ MPV+ S P+G+ +YW+ SN ++Q + A Sbjct: 190 SNKALSEKSGATTGMMYGMPVLIFVFAISAPSGVALYWAVSNAYQVLQTYFLNNPFKIIA 249 Query: 563 EIGLIDRLRSTFSKNY 578 E + + Sbjct: 250 EREAVAQAEKDLEGKK 265 >gi|69247382|ref|ZP_00604326.1| 60 kDa inner membrane protein [Enterococcus faecium DO] gi|68194854|gb|EAN09327.1| 60 kDa inner membrane protein [Enterococcus faecium DO] Length = 308 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395 + N ++G A++ TV V+++ PL Q T Sbjct: 44 PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 103 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453 +L+ + Q M Q+Y+ + ++ GC P+L+Q+P+F A+Y + + Sbjct: 104 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 163 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F+G DL + + I ++ +Q +S Sbjct: 164 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 200 Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + Q + M P + VF S PAG+ +YW V S +Q + M + L + Sbjct: 201 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 258 Query: 570 LRSTFSKNYNSQ 581 + +N Q Sbjct: 259 VAEELKQNPPKQ 270 >gi|306834162|ref|ZP_07467282.1| membrane protein [Streptococcus bovis ATCC 700338] gi|304423735|gb|EFM26881.1| membrane protein [Streptococcus bovis ATCC 700338] Length = 306 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 83/240 (34%), Gaps = 27/240 (11%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 + + + ++ + L + K + M ++P + + E+ + + Sbjct: 51 YFANNVGLGFGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYLKPIFEPINERMRNA 110 Query: 407 PPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 Q Q ++ K + IN L GC P+L+Q+P F A+Y + Sbjct: 111 TTQEEKLAAQTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAAQYT---------- 160 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 + F + + ++ ++ M+ + Sbjct: 161 ---------QGVSESTFLGIDLGTRSIPLTAVIAVLYLFQSWLSMQGVAEEQRAAMKGTM 211 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 MP++ VF S PA +++YW SI+QQ + M + L ++ + F KN Sbjct: 212 YAMPLMMVFFGMSMPASVLLYWLVGGFFSIIQQLITM--LIIKPKLRQKIAAEFEKNPPK 269 >gi|307702545|ref|ZP_07639498.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037] gi|307623891|gb|EFO02875.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037] Length = 289 Score = 108 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 108/256 (42%), Gaps = 29/256 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ D F+ F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ Sbjct: 29 DITADSTDFWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQMVASRKMQ 88 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L + M ++YK I + WPIL+Q+PV A+++ + Sbjct: 89 EAQPRIKALREQYPGRDMESRTKLDQEMRKVYKELGIKHSSSLWPILIQMPVLLALFQAL 148 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L D + + PI+ ++ F+ + Sbjct: 149 SR-VDFLKTGHFLWI-NLGGVDTSF-------------------VLPILAAVFTFLSSWL 187 Query: 508 SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--KMHGA 562 S + ++ MPV+ S P+G+ +YW+ SN ++Q + A Sbjct: 188 SNKALSEKSGATTGMMYGMPVLIFVFAISAPSGVALYWAVSNAYQVLQTYFLNNPFKIIA 247 Query: 563 EIGLIDRLRSTFSKNY 578 E + + Sbjct: 248 EREAVAQAEKDLEGKK 263 >gi|171780265|ref|ZP_02921169.1| hypothetical protein STRINF_02053 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281613|gb|EDT47048.1| hypothetical protein STRINF_02053 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 249 Score = 108 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 82/235 (34%), Gaps = 35/235 (14%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL---- 411 + ++ + L + K + M ++P + E+ + + Q Sbjct: 5 FGLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYLKPIFAPINERMRNATTQEEKLAA 64 Query: 412 QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 Q ++ K + IN L GC P+L+Q+P F A+Y + + + Sbjct: 65 QTELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAAQYTQGVSGS------------- 111 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM----ILNWMPV 525 F + + I+ F Q +S + Q + MP+ Sbjct: 112 ------TFLGIDLGSRSMPLTAVIAILY----FFQSWLSMQAVAEEQRAAMKGTMYVMPL 161 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 + VF S PA +++YW SI+QQ + M + L ++ F KN Sbjct: 162 MMVFFGMSMPASVLLYWLVGGFFSIIQQLITM--FIIKPKLRKQIAEEFEKNPPK 214 >gi|296455143|ref|YP_003662287.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. longum JDM301] gi|296184575|gb|ADH01457.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. longum JDM301] Length = 335 Score = 108 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 106/248 (42%), Gaps = 22/248 (8%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + F M + ++ +AI++ + V+ FPL KQ S M Sbjct: 20 LTPVEWLQTWIMKIVHDFFAMLGMSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKM 79 Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + + PK+ ++ K+K Q + + ++LY+ ++ NP C P+L+Q PVF +++ Sbjct: 80 QALAPKMQRIQNKYKGKTDQASKEAMSRETMKLYQDNDANPAGSCLPMLIQGPVFMSMFY 139 Query: 446 VISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPF-------YLPGFMHVGIWPIIM 497 +S + D+A A +FGI+ G + +GI+ +M Sbjct: 140 TLSAIPYIANGKRDALGAFDVATAKQFTQTDVFGIVSVTDNFTRASTAGKVVIGIFVFLM 199 Query: 498 SLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 +++ ++ + Q +L PV+++F+ SFP +++YW +NV Sbjct: 200 CFCLWLIQYINMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGVSFPFAVLVYWLTNNV 259 Query: 548 ISIVQQAV 555 ++ + Sbjct: 260 CNLCRTLW 267 >gi|293364547|ref|ZP_06611270.1| SpoJ protein [Streptococcus oralis ATCC 35037] gi|322376167|ref|ZP_08050675.1| SpoIIIJ family protein [Streptococcus sp. C300] gi|291316959|gb|EFE57389.1| SpoJ protein [Streptococcus oralis ATCC 35037] gi|321278849|gb|EFX55894.1| SpoIIIJ family protein [Streptococcus sp. C300] Length = 277 Score = 108 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 108/256 (42%), Gaps = 29/256 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ D F+ F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ Sbjct: 31 DITADSTDFWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQMVASRKMQ 90 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L + M ++YK I + WPIL+Q+PV A+++ + Sbjct: 91 EAQPRIKALREQYPGRDMESRTKLDQEMRKVYKELGIKHSSSLWPILIQMPVLLALFQAL 150 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L D + + PI+ ++ F+ + Sbjct: 151 SR-VDFLKTGHFLWI-NLGGVDTSF-------------------VLPILAAVFTFLSSWL 189 Query: 508 SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--KMHGA 562 S + ++ MPV+ S P+G+ +YW+ SN ++Q + A Sbjct: 190 SNKALSEKSGATTGMMYGMPVLIFVFAISAPSGVALYWAVSNAYQVLQTYFLNNPFKIIA 249 Query: 563 EIGLIDRLRSTFSKNY 578 E + + Sbjct: 250 EREAVAQAEKDLEGKK 265 >gi|302336545|ref|YP_003801752.1| membrane protein insertase, YidC/Oxa1 family [Olsenella uli DSM 7084] gi|301320385|gb|ADK68872.1| membrane protein insertase, YidC/Oxa1 family [Olsenella uli DSM 7084] Length = 252 Score = 108 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 106/241 (43%), Gaps = 15/241 (6%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + + ++ G++GIA+++ T ++L+ PL + S+A M+ +QPK+ Sbjct: 1 MWDWFISFLMHVLESLAGWAGDWGIAVIILTFIMRLIVMPLMTRSTASSARMQALQPKMK 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E++ ++ P+ + + M + Y H NPL GC P+L+Q+PVF A++ V H Sbjct: 61 EIQNRYAD-DPERMNEEMRKFYSEHKFNPLGGCLPVLVQMPVFVALFTVAKNVPADAH-- 117 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 L+ + + + G + ++ + + + M M+ Q Sbjct: 118 ------FLSIMPSLSQSAAGALASGGVAGALVYILFDVAFGVLTLVPMIMNLQNTSDEQR 171 Query: 518 M---IL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM--HGAEIGLIDRLR 571 I+ M V+ ++ S P +++Y+ S + + QQ ++ + + +L Sbjct: 172 QQTLIMGVVMAVMMLWFGWSAPGAVLLYYDTSAIWQVAQQKIVTQRVMQKVKEETEAKLA 231 Query: 572 S 572 S Sbjct: 232 S 232 >gi|312128801|ref|YP_003993675.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor hydrothermalis 108] gi|311778820|gb|ADQ08306.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor hydrothermalis 108] Length = 341 Score = 108 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 34/254 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 W F+A P+ L+ Y+ + ++GIA++L T+ V+ L PL KQ ST+ M Sbjct: 4 TWLDFLAIPLGRLLKLIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSKMA 63 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P++ E+++K+K + +Q+ M++LY+ NP GCWP+L+Q+P+ F++Y V Sbjct: 64 EVAPRLQEIQQKYKN-DQKKMQEEMLKLYQETGYNPAGGCWPLLIQLPILFSLYYVFQNP 122 Query: 451 LEMRHAPFWGWIKDLAAA-----------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 L ++KDL D L + + PI+ + Sbjct: 123 LVYVLGKSHQYVKDLITGATGYNITQRIVDEAQKLGLDMHFFGINLAQKELIVLPILSAA 182 Query: 500 SMFIQ----------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 F+ S A+ ++ + P++ F P+GL++YW+ Sbjct: 183 FSFLSILYSMNSQKKFNPQYSQSQSNAMAESMNKSLMIFSPLMSYFIALQVPSGLVLYWT 242 Query: 544 WSNVISIVQQAVIM 557 +N+ +I+QQ + Sbjct: 243 VTNLFTILQQFIAN 256 >gi|323128077|gb|ADX25374.1| hypothetical protein SDE12394_09760 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 269 Score = 108 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 53/233 (22%), Positives = 110/233 (47%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ + +F + + G+ G+ I+L T+ ++LL PL Q S+ M+ Sbjct: 24 EVTAQSTSGWDQMVYLFARAIQWLSFDGSIGVGIILFTLIIRLLLMPLFNMQIKSSQKMQ 83 Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +IQP++ EL++K+ L + LYK + +NP A P+L+Q+PV A+++ + Sbjct: 84 DIQPELRELQKKYAGKDTETRMKLAEESQALYKKYGVNPYASLMPLLIQMPVMIALFQAL 143 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ + W++ LA D H+ I P++ +L F+ + Sbjct: 144 TRVPFLK-TGTFLWVE-LAQHD-------------------HLYILPVLAALFTFLSTWL 182 Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + A + +++ MP++ F + +G+++YW+ SN +VQ ++ Sbjct: 183 TNLAAREKNIMMTIMIYVMPLMIFFMGFTLASGVVLYWTVSNAFQVVQLLLLN 235 >gi|257867718|ref|ZP_05647371.1| inner membrane protein [Enterococcus casseliflavus EC30] gi|257874045|ref|ZP_05653698.1| inner membrane protein [Enterococcus casseliflavus EC10] gi|257876623|ref|ZP_05656276.1| inner membrane protein [Enterococcus casseliflavus EC20] gi|257801801|gb|EEV30704.1| inner membrane protein [Enterococcus casseliflavus EC30] gi|257808209|gb|EEV37031.1| inner membrane protein [Enterococcus casseliflavus EC10] gi|257810789|gb|EEV39609.1| inner membrane protein [Enterococcus casseliflavus EC20] Length = 306 Score = 108 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 99/259 (38%), Gaps = 39/259 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394 + + + M+ N ++G AI+ T+ V+++ PL Q T Sbjct: 34 MIYRFLVKPLGDMITMLVENFNWSYGWAIIAVTIVVRVIILPLGIHQSRKTMVQSEKMQF 93 Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 L++ + Q M ++Y +N++ GC P+L+Q+P+F A+Y Sbjct: 94 LKPQVDIAQANLKKATTREEQMQAQAEMQKIYSENNVSMFGGIGCLPLLIQMPIFSALYF 153 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + ++++ F+G ++ DP+ +F L + G++ P Sbjct: 154 TARYTQGIQNSEFFG----VSLGDPSILFVAIAGLSYLAQGYISTIGIP----------- 198 Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + Q + M P++ VF S PAG+ +YW V S +Q + + Sbjct: 199 --------EEQKKTMKTMLIVSPLMIVFMSMSAPAGVTLYWVVGGVFSCIQTFITNVIM- 249 Query: 562 AEIGLIDRLRSTFSKNYNS 580 + + ++ + N Sbjct: 250 -KPKIRAQVEAEMKANPPK 267 >gi|269838379|ref|YP_003320607.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus DSM 20745] gi|269787642|gb|ACZ39785.1| 60 kDa inner membrane insertion protein [Sphaerobacter thermophilus DSM 20745] Length = 278 Score = 108 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 31/230 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + G+ G+A++L T+ +K+ P+ + STA ++ IQP + E Sbjct: 4 WEQFVDLIAGGLQGLAAVTGSAGLAVILFTLLLKIALLPITVRTRRSTAALRAIQPALRE 63 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEMRH 455 L+EK+ Q ++LY+ H INP AGC P +++IP F + I S + Sbjct: 64 LQEKYPD-DRQRRSAETLKLYQQHGINPAAGCLPTVIKIPFFIGLIAAIRELSRSGDGAW 122 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-- 513 + W+ DLA ADP + I PI L + M+ P Sbjct: 123 TESFLWLPDLATADPLH-------------------ILPIAAGLFQLLTGMMARPAGQRG 163 Query: 514 ----KGQAMILNWM--PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 KGQA + P + V PAG ++YW+ S + SI +Q ++ Sbjct: 164 AARGKGQARAGLALLSPAIVVAIGWHAPAGPVLYWAVSALFSIGEQWLMT 213 >gi|319949435|ref|ZP_08023496.1| putative inner membrane protein translocase component YidC [Dietzia cinnamea P4] gi|319436897|gb|EFV91956.1| putative inner membrane protein translocase component YidC [Dietzia cinnamea P4] Length = 400 Score = 108 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 106/288 (36%), Gaps = 49/288 (17%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN---FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 +++ I + L+ + N + ++++ V ++ L F A KQ + M+ +QP Sbjct: 19 FWHKIFAFLGGLLPWVEAPDSNGVIWALSVIFLVVTLRALLFWPAAKQIRFSRKMQELQP 78 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI------- 447 K+ EL++++K ++ +L K NPL GC P+L+QIPVF ++ V+ Sbjct: 79 KMKELQKRYKNDREKLAV-ETRKLQKQEGFNPLLGCLPMLIQIPVFLGLFHVLRSFNRMG 137 Query: 448 --------------------SISLE--------MRHAPFWGWIKDLAAADPTNIFTLFGI 479 + E + AP +I + + Sbjct: 138 EQFGALGMTAEETRNTGNYVFNADEVQSFLDARLFGAPLSSFISQPVEQFQAFVEPGAAL 197 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQ-----MKMSPPPADKGQAMILN-----WMPVVFVF 529 + II +++ + SP A QA I+N P+ + Sbjct: 198 DFARWNIILVAVPLMIISAVTTHFNARVSLSRQSPEAAANPQAKIMNQLMLWAFPIGILV 257 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 + +P +++Y +N+ ++ QQ + + E R K Sbjct: 258 TGAFWPMAILVYMVTNNLWTLGQQYFLYERMAKEDDAAALARREEQKA 305 >gi|291517735|emb|CBK71351.1| Preprotein translocase subunit YidC [Bifidobacterium longum subsp. longum F8] Length = 305 Score = 108 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 49/231 (21%), Positives = 102/231 (44%), Gaps = 22/231 (9%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F M + ++ +AI++ + V+ FPL KQ S M+ + PK+ ++ K+K Sbjct: 7 FFAMLGMSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKMQALAPKMQRIQNKYKGK 66 Query: 407 PPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR-HAPFWGW 461 Q ++ ++LY+ +++NP C P+L+Q PVF +++ +S + Sbjct: 67 TDQASREAMSRETMKLYQDNDVNPAGSCLPMLIQGPVFMSMFYTLSAIPYIANGKRDALG 126 Query: 462 IKDLAAADPTNIFTLFGILPF-------YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 D+A A +FGI+ G + +GI+ +M ++ + Sbjct: 127 AFDVATAKQFTQTDVFGIVSVTDNFTRASTAGKVVIGIFVFLMCFCLWFMQYFNMKRNMP 186 Query: 515 ----------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 Q +L PV+++F+ ++ P +++YW +NV ++ + Sbjct: 187 AASMNKQAETMQKAMLWLFPVMYIFSGATMPFAVLVYWLTNNVCNLCRTLW 237 >gi|240168405|ref|ZP_04747064.1| putative inner membrane protein translocase component YidC [Mycobacterium kansasii ATCC 12478] Length = 381 Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 104/278 (37%), Gaps = 39/278 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + + + + + + +++M ++ L + +Q +T M Sbjct: 10 LDFVYYPVSWIMWVWYKLFALIFGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 69 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-- 447 + +QP+I L++K+ Q + M +L + H NP+ GC P+L QIPVF +Y V+ Sbjct: 70 QELQPQIKALQKKY-GKDRQRMAMEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 128 Query: 448 ------------SISLEMRHAPFWGWIK-DLAAADPTNIF------------TLFGILPF 482 +E R + + D+ N+F L + F Sbjct: 129 FNRTTGGFGQPQMSVVENRLTGNYVFTPTDVGHFLDANLFGAPIGASMTQRGGLDAFVDF 188 Query: 483 YLPGFMHVGI-WPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMPVVFVFAL 531 P + VG+ I+ ++ + + SP A Q ++ P+ V Sbjct: 189 SRPAVIAVGVPVMILAGIATYFNSRASIARQSPEAAANPQTAMMNKLALYVFPLGVVVGG 248 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P +I+YW +N+ + QQ + M E + Sbjct: 249 PFLPLAIILYWFSNNIWTFAQQHYVFGMIEKEDEAKRQ 286 >gi|25011697|ref|NP_736092.1| OxaA-like protein precursor [Streptococcus agalactiae NEM316] gi|38503012|sp|Q8E3U9|OXAA2_STRA3 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|24413237|emb|CAD47316.1| Unknown [Streptococcus agalactiae NEM316] Length = 310 Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 77/213 (36%), Gaps = 27/213 (12%) Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL-- 427 L + K M +P + + E+ + + Q Q ++ + + ++ Sbjct: 78 LGLYQSWKASYQAEKMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGG 137 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+Q+P F AI+ + P F L Sbjct: 138 IGCLPLLIQMPFFSAIFFAARYT-------------------PGVSSATFLGLNLGQKSL 178 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 I I+ + ++ M+ P + ++ MP+ VF S PA + +YW + Sbjct: 179 TLTVIIAILYFVQSWLSMQGVPDEQRQQMKTMMYVMPIAMVFMSISLPASVALYWFIGGI 238 Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 SI+QQ V + + L ++ ++KN Sbjct: 239 FSIIQQLVTT--YVLKPKLRRKVEEEYTKNPPK 269 >gi|282851875|ref|ZP_06261237.1| putative stage III sporulation protein J [Lactobacillus gasseri 224-1] gi|282556982|gb|EFB62582.1| putative stage III sporulation protein J [Lactobacillus gasseri 224-1] Length = 256 Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 21/254 (8%) Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT 367 + A P +W Y + ++ + ++G AI++ Sbjct: 19 MLTLALVVTGCASTNGSSVAPISHTSGNWWDRYIVYYISQFILWIASLVRDSYGWAIIIF 78 Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNI 424 T+ V+++ PL S A + +QP++D LR+K+ Q LQ+ +LYK I Sbjct: 79 TIIVRIILLPLNAISIKSMAKQQKVQPQMDALRKKYPGKDVESRQKLQEETSKLYKEAGI 138 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 NP GC P+L+Q+PV +A+Y+ I + ++ + W+ DL DP I P Sbjct: 139 NPYTGCLPMLIQLPVMYALYQAIWRTPQL-QNGRFLWM-DLGRPDPYYIM------PVLA 190 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWS 543 F + S +I +P + G + + MP++ + + + +YW Sbjct: 191 AAFTFI---------STYISQMSTPQSSQNGMTKGMTYLMPLIIGVSAIGIQSAISLYWV 241 Query: 544 WSNVISIVQQAVIM 557 SN+ +VQ ++ Sbjct: 242 ISNLFQVVQTFILQ 255 >gi|257879967|ref|ZP_05659620.1| inner membrane protein [Enterococcus faecium 1,230,933] gi|257814195|gb|EEV42953.1| inner membrane protein [Enterococcus faecium 1,230,933] Length = 309 Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395 + N ++G A++ TV V+++ PL Q T Sbjct: 45 PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453 +L+ + Q M Q+Y+ + ++ GC P+L+Q+P+F A+Y + + Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F+G DL + + I ++ +Q +S Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201 Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + Q + M P + VF S PAG+ +YW V S +Q + M + L + Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259 Query: 570 LRSTFSKNYNSQ 581 + +N Q Sbjct: 260 VAEELKQNPPKQ 271 >gi|315222384|ref|ZP_07864289.1| putative stage III sporulation protein J [Streptococcus anginosus F0211] gi|315188545|gb|EFU22255.1| putative stage III sporulation protein J [Streptococcus anginosus F0211] Length = 271 Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 27/218 (12%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 F + F + G+ GI I+L T+ ++ + P+ + Q ++ M+ QP + EL+ K+ Sbjct: 39 YFFAVTIRFLSFNGSTGIGIILFTLIIRTVLLPVFQLQINASRKMQEAQPLVKELQAKYP 98 Query: 405 QSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + L + +LYK + P A WP+L+Q+PV A+Y ++ +E + W Sbjct: 99 GRDMESRSRLAEETQKLYKELGVKPSASFWPLLIQMPVLIALYHALTR-VEFLKVGHFLW 157 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAM 518 + +L A DP I P++ ++ F+ +S + Sbjct: 158 L-NLGATDPYY-------------------ILPVLAAVFTFLSTWLSNKGMAERNGLMTG 197 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ MP+ F S +G+ +YWS S + Q ++ Sbjct: 198 MMFVMPLFVFFFAMSVASGVALYWSTSYAYQVFQTLLL 235 >gi|302531354|ref|ZP_07283696.1| preprotein translocase YidC subunit [Streptomyces sp. AA4] gi|302440249|gb|EFL12065.1| preprotein translocase YidC subunit [Streptomyces sp. AA4] Length = 375 Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 102/262 (38%), Gaps = 44/262 (16%) Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ ++ + ++ + I+ T V+ + F Q S Sbjct: 1 MLDFIYYPVSFILWCWHKVFGFVFGEATAISWILGIIFLTFTVRGIMFKPFVNQVRSMKK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M++ P++ ++++K+ Q + M +L + H +NPL C P++LQIPVF + V+ Sbjct: 61 MQDFAPEMKKIQKKYAN-DRQRQAQEMQKLQREHGVNPLGSCLPMILQIPVFIGLNHVLR 119 Query: 449 ISLEM-------RHAPFWGWIKDLAAADPTNIFTL----------------FGILPFYLP 485 + M + ++ D+ + +F + ++ Sbjct: 120 -AFTMPPAGGGPKTENYFFNEHDVNSYVSAKLFGVNMGEAVNNGVGAVAGHVANGGWHWE 178 Query: 486 GFMHVGIWPIIMSLSMFIQ-----MKMSPPPADKGQAMIL-----NWMPVVFVFALSSFP 535 II S++ + + + A Q I+ P+ + + FP Sbjct: 179 VLPVALPLMIIASIATHLTARHSVSRQNASAAGTPQTAIMNKLTMYVFPLGVLVFGAFFP 238 Query: 536 AGLIIYWSWSNVISIVQQAVIM 557 GL+ YW +N +++QQ ++ Sbjct: 239 LGLLFYWLANNGWTLMQQRLVY 260 >gi|77408490|ref|ZP_00785228.1| SpoIIIJ family protein [Streptococcus agalactiae COH1] gi|77172932|gb|EAO76063.1| SpoIIIJ family protein [Streptococcus agalactiae COH1] Length = 266 Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 79/213 (37%), Gaps = 27/213 (12%) Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL-- 427 L + K M +P + + E+ + + Q Q ++ + + ++ Sbjct: 34 LGLYQSWKASYQAEKMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGG 93 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+Q+P F AI+ + P F L Sbjct: 94 IGCLPLLIQMPFFSAIFFAARYT-------------------PGVSSATFLGLNLGQKSL 134 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + I I+ + ++ M+ P + ++ MP++ VF S PA + +YW + Sbjct: 135 ILTVIIAILYFVQSWLSMQGVPDEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGI 194 Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 SI+QQ V + + L ++ ++KN Sbjct: 195 FSIIQQLVTT--YVLKPKLRRKVEEEYTKNPPK 225 >gi|312794741|ref|YP_004027664.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181881|gb|ADQ42051.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor kristjanssonii 177R1B] Length = 341 Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 34/254 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 W F+A P+ L+ + Y+ + ++GIA++L T+ V+ L PL KQ ST+ M Sbjct: 4 TWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSKMA 63 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P++ E+++K+K ++ Q+ M++LY+ NP GCWP+L+Q P+ FA+Y V Sbjct: 64 EVAPRLQEIQQKYKNDQRKM-QEEMLKLYQETGYNPAGGCWPLLIQAPILFALYYVFQNP 122 Query: 451 LEMRHAPFWGWIKDLAAA-----------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 L +++DL D L + + PI+ + Sbjct: 123 LVYVLGKSHQYVRDLITGATGYAITQRIVDEAQKLGLDMHFFGINLAQKELIVLPILSAA 182 Query: 500 SMFIQ----------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 F+ S A+ ++ + P++ F P+GL++YW+ Sbjct: 183 FSFLSILYSMNSQKKFNPQYSQSQSNAMAESMNRSLMIFSPLMSYFIALQVPSGLVLYWT 242 Query: 544 WSNVISIVQQAVIM 557 SN+ I+QQ + Sbjct: 243 VSNLFQILQQFIAN 256 >gi|329117705|ref|ZP_08246422.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parauberis NCFD 2020] gi|326908110|gb|EGE55024.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parauberis NCFD 2020] Length = 310 Score = 107 bits (266), Expect = 5e-21, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 71/212 (33%), Gaps = 31/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + + + P ++ Q Q ++ K + IN L GC P Sbjct: 83 SWKASYQSEKMAYLKPIFDPINQRMKNASTQEEKFAAQSDLMAAQKANGINMLGGMGCLP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+Q+P F A+Y + + F + GI Sbjct: 143 LLIQMPFFSAMYFAAMYT-------------------KGISTSTFMGIDLGSRSLALTGI 183 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 I+ F Q +S + Q ++ MP++ +F S PAG+ +YW Sbjct: 184 IAILY----FFQSWLSMQAVAEEQRAQMKTMMYTMPIMMIFMTLSLPAGVGLYWLVGGFF 239 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 SI+QQ + + + L ++ + N Sbjct: 240 SIIQQLITT--YIIKPKLRQKIEEEYKNNPPK 269 >gi|307185547|gb|EFN71509.1| Mitochondrial inner membrane protein OXA1L [Camponotus floridanus] Length = 413 Score = 107 bits (266), Expect = 5e-21, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 97/267 (36%), Gaps = 40/267 (14%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKN 391 I Y + + + + I++ T+ V++L FP+ K + N N Sbjct: 107 SIGLASSYTPVGLIQKFLEFMHISCDIPWWTTIVIGTICVRVLIFPIVIKAQKNMINFSN 166 Query: 392 IQPKIDELREKF-------KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 P I EL+ K + M+Q K ++++P+ L+Q PVF + + Sbjct: 167 CMPVITELQMKMTEARQNGDHFESARIANEMMQYMKKNDVSPVKNFIVPLIQAPVFLSFF 226 Query: 445 KVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + +E + W+ DL DP I PI+ S++ Sbjct: 227 LALRGMANTPVESLKYGGFWWLHDLTVHDPYY-------------------IMPIVTSVT 267 Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA-- 554 M+I +++ + + + +P + + + FP ++ YW +N +S+VQ Sbjct: 268 MYITIELGADGTNLKSMGMFRYVLRAVPFIILPFMIHFPGAILTYWVSTNFVSLVQTGIL 327 Query: 555 ---VIMKMHGAEIGLIDRLRSTFSKNY 578 + K + + + K Sbjct: 328 KVPYVRKTLDMPTRIKHKSAADGKKKN 354 >gi|262204659|ref|YP_003275867.1| membrane protein insertase, YidC/Oxa1 family [Gordonia bronchialis DSM 43247] gi|262088006|gb|ACY23974.1| membrane protein insertase, YidC/Oxa1 family [Gordonia bronchialis DSM 43247] Length = 411 Score = 107 bits (266), Expect = 5e-21, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 116/300 (38%), Gaps = 59/300 (19%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN------------FGIAIMLTTVFVKLLFFPLAKKQYVS 385 FI P+ +M ++ L + + ++++ ++ + + KQ + Sbjct: 1 MLNFIYYPVSGIMWVWHWLFDHILPNSPGGDGVAWALSVVFLVFTLRAILYKPFVKQIRT 60 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 T M+ I P++ +R+K+ + ++ + M +L K H NPL GC P+LLQIPVF ++ Sbjct: 61 TKKMQEINPELQAIRKKYAKDRVKM-TEEMQKLQKEHGFNPLLGCLPMLLQIPVFIGLFH 119 Query: 446 VI--------------SISLEMRHAPFWGWIKD--------------LAAA--DPTNIFT 475 V+ E R+ P + + D L++ P + Sbjct: 120 VLRSFNRTATGMGQLGMSPTETRNTPNYFFSVDQVQNFLDARLFGVPLSSFITQPVTEWQ 179 Query: 476 LF---GILPFYLPGFMHVGIWP--IIMSLSMFIQMKMSPPPADKG-----QAMIL----- 520 F G + + + + P II S++ + + S + Q ++ Sbjct: 180 AFVNPGEPIDFTRVQIAIVVVPMMIIASIATHMNSRASVARQPEAALENPQTRMMNMLAL 239 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 P+ + FP +++YW +N+ + QQ ++ A+ +L N+ Sbjct: 240 YIFPLGILVTGPFFPVAILLYWMSNNIWTYGQQHLVFGRI-AKEEEEAKLAKQEKLKANA 298 >gi|257886890|ref|ZP_05666543.1| inner membrane protein [Enterococcus faecium 1,141,733] gi|293568628|ref|ZP_06679943.1| membrane protein OxaA 2 [Enterococcus faecium E1071] gi|293571649|ref|ZP_06682670.1| membrane protein OxaA 2 [Enterococcus faecium E980] gi|257822944|gb|EEV49876.1| inner membrane protein [Enterococcus faecium 1,141,733] gi|291588588|gb|EFF20421.1| membrane protein OxaA 2 [Enterococcus faecium E1071] gi|291608319|gb|EFF37620.1| membrane protein OxaA 2 [Enterococcus faecium E980] Length = 316 Score = 107 bits (266), Expect = 5e-21, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395 + N ++G A++ TV V+++ PL Q T Sbjct: 45 PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453 +L+ + Q M Q+Y+ + ++ GC P+L+Q+P+F A+Y + + Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F+G DL + + I ++ +Q +S Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201 Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + Q + M P + VF S PAG+ +YW V S +Q + M + L + Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259 Query: 570 LRSTFSKNYNSQ 581 + +N Q Sbjct: 260 VAEELKQNPPKQ 271 >gi|50955953|ref|YP_063241.1| putative inner membrane protein translocase component YidC [Leifsonia xyli subsp. xyli str. CTCB07] gi|50952435|gb|AAT90136.1| preprotein translocase, YidC subunit [Leifsonia xyli subsp. xyli str. CTCB07] Length = 324 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 112/262 (42%), Gaps = 36/262 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGN----------FGIAIMLTTVFVKLLFFPLAKKQYVST 386 + I + +++ ++ L+ + ++I+ T+ V+ P+ +Q + Sbjct: 6 TLLWPIKWVVELILVAWHWLLYQVGFDPAAGLTWVLSIVGLTIVVRAALIPVFFRQIKNQ 65 Query: 387 ANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 M I P++ ++++K+K Q + + + LYK NPL+ C P+LLQ+PVFFA Sbjct: 66 RRMLEIAPQLKKIQDKYKGKKDQFSREAMSRETMDLYKKTGTNPLSSCLPLLLQMPVFFA 125 Query: 443 IYKVISISLEMRHAPFWGWIKDLA-----------AADPTNIFTLFGILPFYLPGFMHVG 491 +++V++ + + HA LA A + P + Sbjct: 126 LFQVLNGA-QGGHAGVGPLNSGLAEQFGSATLFGVAPLHQSFQGAMNANPVQTSVVIIAA 184 Query: 492 IWPIIMSLSMFIQMKM---------SPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIY 541 I + M+ S FI + Q IL ++ P VF+F+ +FP G++ Y Sbjct: 185 IMVVFMTGSQFITQLQIVSKNTSPETKASPQFKQQRILLYLLPFVFLFSGFAFPLGVMFY 244 Query: 542 WSWSNVISIVQQAVIMKMHGAE 563 W SN ++ QQ ++++ Sbjct: 245 WLTSNFWTMGQQFLVIRNMPTP 266 >gi|325688910|gb|EGD30918.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK115] Length = 271 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 29/232 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I L+EK+ + Sbjct: 46 RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + +LYK +NP A P+ +Q+PV A+++ ++ ++ + W+ +L A Sbjct: 106 TALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525 DPT I P++ +L F+ +S + G +++ +PV Sbjct: 164 DPTF-------------------ILPLLAALFTFLSTWLSNKALPERNGGMTVMMYLLPV 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 F +G+ +YW+ SN +VQ ++ + +I + + Sbjct: 205 AIFFFALYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254 >gi|257890476|ref|ZP_05670129.1| inner membrane protein [Enterococcus faecium 1,231,410] gi|257826836|gb|EEV53462.1| inner membrane protein [Enterococcus faecium 1,231,410] Length = 316 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 91/252 (36%), Gaps = 39/252 (15%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395 + N ++G A++ TV V+++ PL Q T Sbjct: 45 PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453 +L+ + Q M Q+Y+ + ++ GC P+L+Q+P+F A+Y + + Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + + DL + + +I ++ +Q +S Sbjct: 165 RESS--FYSIDLGSP---------------------SMVLVVIAGVAYLLQGYISTIGIP 201 Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + Q + M P + VF S PAG+ +YW V S +Q + M + L + Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259 Query: 570 LRSTFSKNYNSQ 581 + +N Q Sbjct: 260 VAEELKQNPPKQ 271 >gi|257884106|ref|ZP_05663759.1| inner membrane protein [Enterococcus faecium 1,231,501] gi|257819944|gb|EEV47092.1| inner membrane protein [Enterococcus faecium 1,231,501] Length = 316 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395 + N ++G A++ TV V+++ PL Q T Sbjct: 45 PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453 +L+ + Q M Q+Y+ + ++ GC P+L+Q+P+F A+Y + + Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F+G DL + + I ++ +Q +S Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201 Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + Q + M P + VF S PAG+ +YW V S +Q + M + L + Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259 Query: 570 LRSTFSKNYNSQ 581 + +N Q Sbjct: 260 VAEELKQNPPKQ 271 >gi|76787291|ref|YP_329128.1| membrane protein oxaA [Streptococcus agalactiae A909] gi|77407082|ref|ZP_00784085.1| SpoIIIJ family protein [Streptococcus agalactiae H36B] gi|76562348|gb|ABA44932.1| membrane protein oxaA, putative [Streptococcus agalactiae A909] gi|77174313|gb|EAO77179.1| SpoIIIJ family protein [Streptococcus agalactiae H36B] Length = 271 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 99/212 (46%), Gaps = 27/212 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 + + + G+ I+L T+ ++ + PL Q S+ M+ IQP++ EL++K+ P Sbjct: 46 QWLSFNHSIGLGIILFTLIIRAIMMPLYNMQMKSSQKMQEIQPRLKELQKKYPGKDPDSR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L M +YK +NP A P+L+Q+PV +A+++ ++ ++ F +L+ Sbjct: 106 LKLNDEMQSMYKAEGVNPYASVLPLLIQLPVLWALFQALTRVSFLKVGTFLS--LELSQP 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ---AMILNWMPV 525 DP I P++ +L F+ ++ A + ++ MP+ Sbjct: 164 DPYY-------------------ILPVLAALFTFLSTWLTNKAAVEKNIALTLMTYVMPL 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + +F +G+++YW+ SN + Q ++ Sbjct: 205 IILVTSFNFASGVVLYWTVSNAFQVFQILLLN 236 >gi|294616351|ref|ZP_06696144.1| membrane protein OxaA 2 [Enterococcus faecium E1636] gi|291590865|gb|EFF22581.1| membrane protein OxaA 2 [Enterococcus faecium E1636] Length = 316 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 91/252 (36%), Gaps = 39/252 (15%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395 + N ++G A++ TV V+++ PL Q T Sbjct: 45 PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453 +L+ + Q M Q+Y+ + ++ GC P+L+Q+P+F A+Y + + Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F+G DL + + I ++ +Q +S Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201 Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + Q + M P + VF S PAG+ +YW V S +Q + M + L + Sbjct: 202 EEQKKTMRTMLIVSPALIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259 Query: 570 LRSTFSKNYNSQ 581 + K Q Sbjct: 260 VAEELKKKPPKQ 271 >gi|169632026|ref|YP_001705675.1| putative inner membrane protein translocase component YidC [Mycobacterium abscessus ATCC 19977] gi|169243993|emb|CAM65021.1| Membrane protein OxaA [Mycobacterium abscessus] Length = 361 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 104/296 (35%), Gaps = 43/296 (14%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 D F G + K L+ + +++M ++ + + +Q Sbjct: 3 DWFNLGFIYYPVSGIMWVWYKLFAYLLGPKNFFA--WALSVMFLVFTLRAILYKPFVRQI 60 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +T M+ +QP+I L++K+K Q + M +L + H NP+ GC P+L QIPVF + Sbjct: 61 RTTRQMQELQPQIKALQKKYKN-DRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGL 119 Query: 444 YKVISI-------------SLEMRHAP--FWGWIKDLA---------AADPTNIFTLFGI 479 + V+ ++E A ++ D+A A + G+ Sbjct: 120 FHVLRSFNRTTGGFGQVHMTVEANRATGNYFFSANDVANFLDANLFGAPLGATMIQTTGL 179 Query: 480 LPFYLPGFMHVG----IWPIIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWMPV 525 F + V II ++ + + SP Q I+ P+ Sbjct: 180 DAFTEFNRLAVAGVSIPLMIIAGVATYFNSRASIARQSPEAQANPQTQIMNRLALYVFPL 239 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR--LRSTFSKNYN 579 V P +I+YW +N+ + QQ + E + L + Sbjct: 240 GVVVGGPFLPIAIILYWVSNNIWTFGQQHYVFNRIAKEEEEKKQADLERRAANAPK 295 >gi|315611930|ref|ZP_07886848.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis ATCC 49296] gi|315315919|gb|EFU63953.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis ATCC 49296] Length = 277 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 108/256 (42%), Gaps = 29/256 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ D F+ F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ Sbjct: 31 DITADSTDFWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQMVASRKMQ 90 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L + M ++YK I + WPIL+Q+PV A+++ + Sbjct: 91 EAQPRIKALREQYPGRDMESRTQLDQEMRKVYKELGIKHSSSLWPILIQMPVLLALFQAL 150 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L D + + PI+ ++ F+ + Sbjct: 151 SR-VDFLKTGHFLWI-NLGGVDTSF-------------------VLPILAAVFTFLSSWL 189 Query: 508 SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM--KMHGA 562 S + ++ MPV+ S P+G+ +YW+ SN ++Q + A Sbjct: 190 SNKALSEKSGATTGMMYGMPVLIFVFAISAPSGVALYWAVSNAYQVLQTYFLNNPFKIIA 249 Query: 563 EIGLIDRLRSTFSKNY 578 E + + Sbjct: 250 EREAVAQAEKDLEGKK 265 >gi|257893080|ref|ZP_05672733.1| inner membrane protein [Enterococcus faecium 1,231,408] gi|257829459|gb|EEV56066.1| inner membrane protein [Enterococcus faecium 1,231,408] Length = 316 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395 + N ++G A++ TV V+++ PL Q T Sbjct: 45 PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453 +L+ + Q M Q+Y+ + ++ GC P+L+Q+P+F A+Y + + Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F+G DL + + I ++ +Q +S Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201 Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + Q + M P + VF S PAG+ +YW V S +Q + M + L + Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259 Query: 570 LRSTFSKNYNSQ 581 + +N Q Sbjct: 260 VAEELKQNPPKQ 271 >gi|291455688|ref|ZP_06595078.1| membrane protein OxaA [Bifidobacterium breve DSM 20213] gi|291382616|gb|EFE90134.1| membrane protein OxaA [Bifidobacterium breve DSM 20213] Length = 336 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 109/248 (43%), Gaps = 22/248 (8%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + F +M + ++ +AI++ + V+ FPL KQ S M Sbjct: 21 LTPVEWLQTWIMKIVHDFFVMLGMSPVGVSWILAIIILVLVVQACIFPLFYKQIKSMRKM 80 Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + + PK+ ++ K+K Q + + ++LY+ +N+NP C P+L+Q PVF +++ Sbjct: 81 QALAPKMQRIQNKYKGKTDQASKEAMSRETMKLYQDNNVNPAGSCLPMLIQGPVFMSMFY 140 Query: 446 VISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIM 497 +S + D+A A +FGI+ G + +G++ +M Sbjct: 141 TLSAIPYIANGKRDPLGAFDVATAKQFTQTDVFGIVSVTDNFTRAATAGKVVIGVFVFLM 200 Query: 498 SLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 +++ ++ + Q +L PV+++F+ +SFP +++YW +NV Sbjct: 201 CFCLWLMQYINMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGASFPFAVLVYWLTNNV 260 Query: 548 ISIVQQAV 555 ++ + Sbjct: 261 CNLCRTLW 268 >gi|158294169|ref|XP_315429.4| AGAP005421-PA [Anopheles gambiae str. PEST] gi|157015441|gb|EAA11925.4| AGAP005421-PA [Anopheles gambiae str. PEST] Length = 419 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 88/265 (33%), Gaps = 50/265 (18%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + M + + + I + TV V+ L FPL + A M N P++ Sbjct: 115 WTPVGIVQNCMEFLHIGLDLPWWGCIAIGTVCVRTLLFPLVIASQRNAAKMNNYMPQLQV 174 Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS- 450 L+ K ++ + M+ K N+NPL L Q P+F + + + Sbjct: 175 LQMKMTEARQAGNAIDSARYGQEMVLFMKEKNLNPLKNMLVPLAQAPIFISFFMGLREMA 234 Query: 451 ---LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504 +E W DL D PII SL++F Sbjct: 235 NTPVESMRDGGLFWFTDLTICDQFY-------------------ALPIITSLTLFATIEL 275 Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV----- 555 +MS IL +P+ +FP ++ YW+ SN S+VQ Sbjct: 276 GTDSARMSAANMQ-TAKYILRALPLFIFPFTINFPGAILCYWACSNFFSLVQVGFLRIPK 334 Query: 556 ------IMKMHGAEIGLIDRLRSTF 574 I ++ + + + F Sbjct: 335 VRDFFKIDRIVTHKPETLPIKKKGF 359 >gi|319940011|ref|ZP_08014365.1| membrane protein oxaA 1 [Streptococcus anginosus 1_2_62CV] gi|319810725|gb|EFW07052.1| membrane protein oxaA 1 [Streptococcus anginosus 1_2_62CV] Length = 271 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 27/218 (12%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 F + F + G+ GI I+L T+ ++ + P+ + Q ++ M+ QP + EL+ K+ Sbjct: 39 YFFAVTIRFLSFNGSTGIGIILFTLIIRTVLLPVFQLQINASRKMQEAQPLVKELQAKYP 98 Query: 405 QSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + L + +LYK + P A WP+L+Q+PV A+Y ++ +E + W Sbjct: 99 GRDMESRSRLAEETQKLYKELGVKPSASFWPLLIQMPVLIALYHALTR-VEFLKVGHFLW 157 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAM 518 + +L A DP I P++ ++ F+ +S + Sbjct: 158 L-NLGATDPYY-------------------ILPVLAAVFTFLSTWLSNKGMAERNGLMTG 197 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ MP+ F S +G+ +YWS S + Q ++ Sbjct: 198 MMFVMPLFVFFFAMSVASGVALYWSTSYAYQVFQTLLL 235 >gi|227551947|ref|ZP_03981996.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecium TX1330] gi|257895460|ref|ZP_05675113.1| inner membrane protein [Enterococcus faecium Com12] gi|293378327|ref|ZP_06624496.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecium PC4.1] gi|227178852|gb|EEI59824.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecium TX1330] gi|257832025|gb|EEV58446.1| inner membrane protein [Enterococcus faecium Com12] gi|292643191|gb|EFF61332.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecium PC4.1] Length = 316 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395 + N ++G A++ TV V+++ PL Q T Sbjct: 45 PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453 +L+ + Q M Q+Y+ + ++ GC P+L+Q+P+F A+Y + + Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F+G DL + + I ++ +Q +S Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201 Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + Q + M P + VF S PAG+ +YW V S +Q + M + L + Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259 Query: 570 LRSTFSKNYNSQ 581 + +N Q Sbjct: 260 VAEELKQNPPKQ 271 >gi|325571080|ref|ZP_08146652.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus casseliflavus ATCC 12755] gi|325156165|gb|EGC68351.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus casseliflavus ATCC 12755] Length = 308 Score = 107 bits (266), Expect = 7e-21, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 99/259 (38%), Gaps = 39/259 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394 + + + M+ N ++G AI+ T+ V+++ PL Q T Sbjct: 37 MIYRFLVKPLGDMITMLVENFNWSYGWAIIAVTIVVRVIILPLGIHQSRKTMIQSEKMQF 96 Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 L++ + Q M ++Y +N++ GC P+L+Q+P+F A+Y Sbjct: 97 LKPQVDIAQANLKKATTREEQMQAQAEMQKIYSENNVSMFGGIGCLPLLIQMPIFSALYF 156 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + ++++ F+G ++ DP+ +F + + G++ P Sbjct: 157 TARYTQGIQNSEFFG----VSLGDPSILFVAIAGISYLAQGYISTIGIP----------- 201 Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + Q + M P++ VF S PAG+ +YW V S +Q + + Sbjct: 202 --------EEQKKTMKTMLIVSPLMIVFMSMSAPAGVTLYWVVGGVFSCIQTFITNVIM- 252 Query: 562 AEIGLIDRLRSTFSKNYNS 580 + + ++ + N Sbjct: 253 -KPKIRAQVEAEMKANPPK 270 >gi|183602664|ref|ZP_02964028.1| conserved hypothetical transmembrane protein in the 60 kDa inner membrane protein family [Bifidobacterium animalis subsp. lactis HN019] gi|219684025|ref|YP_002470408.1| hypothetical protein BLA_1550 [Bifidobacterium animalis subsp. lactis AD011] gi|241191630|ref|YP_002969024.1| Preprotein translocase subunit [Bifidobacterium animalis subsp. lactis Bl-04] gi|241197035|ref|YP_002970590.1| Preprotein translocase subunit [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218082|gb|EDT88729.1| conserved hypothetical transmembrane protein in the 60 kDa inner membrane protein family [Bifidobacterium animalis subsp. lactis HN019] gi|219621675|gb|ACL29832.1| membrane protein oxaA [Bifidobacterium animalis subsp. lactis AD011] gi|240250022|gb|ACS46962.1| Preprotein translocase subunit [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251589|gb|ACS48528.1| Preprotein translocase subunit [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177766|gb|ADC85012.1| Inner membrane protein [Bifidobacterium animalis subsp. lactis BB-12] gi|295794622|gb|ADG34157.1| Preprotein translocase subunit [Bifidobacterium animalis subsp. lactis V9] Length = 336 Score = 106 bits (265), Expect = 7e-21, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 110/249 (44%), Gaps = 27/249 (10%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLV------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 ++ + + + + ++ +AI+ + V+ FPL K Sbjct: 18 KILTPIEWLMTWVMWVFHKLFTFIGMPEHGISWALAIIFLVIVVQACVFPLYYKSMKGMR 77 Query: 388 NMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 M+ +QPK+ +++ K+K + +Q+ M++LYK +N NP C P+LLQ PVF + Sbjct: 78 AMQAMQPKMMKIQNKYKGKNDPASKEAMQREMMKLYKDNNANPAGSCLPMLLQGPVFMCM 137 Query: 444 YKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGILPFY------LPGFMHVGIWPII 496 + V+S + R D+A A+ + T FG+ G + +GI+ + Sbjct: 138 FYVLSAIPYIARGKRSPLGAFDVATAESFSQSTYFGVKITDSFTTATTTGKVVIGIFVAL 197 Query: 497 MSL----SMFIQMKMSPPPA------DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 M F M+ + PA Q +L P++++F+ + P ++IYW +N Sbjct: 198 MCACLWYMQFYSMRRNTAPASVNRQSQMMQKAMLWVFPIMYIFSGVAMPFAVLIYWLANN 257 Query: 547 VISIVQQAV 555 + ++++ Sbjct: 258 ICNLLRTMW 266 >gi|312623586|ref|YP_004025199.1| membrane protein insertase, yidc/oxa1 family [Caldicellulosiruptor kronotskyensis 2002] gi|312204053|gb|ADQ47380.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor kronotskyensis 2002] Length = 341 Score = 106 bits (265), Expect = 7e-21, Method: Composition-based stats. Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 34/254 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 W F+A P+ L+ + Y+ + ++GIAI+L T+ V+ L PL KQ ST+ M Sbjct: 4 TWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAIILLTLIVRGLLLPLYIKQIQSTSKMA 63 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P++ E+++K+K + +Q+ M++LY+ NP GCWP+L+QIP+ F++Y V Sbjct: 64 EVAPRLQEIQQKYKN-DQKKMQEEMLKLYQETGYNPAGGCWPLLIQIPILFSLYYVFQNP 122 Query: 451 LEMRHAPFWGWIKDLAAADPTN-----IFTLFGILPFYLPGFMH------VGIWPIIMSL 499 L ++KDL I L + F + + PI+ ++ Sbjct: 123 LVYVLGKSHQYVKDLITGATGYNITQRIVNEAQKLGLDMHFFGINLAQKELIVLPILSAV 182 Query: 500 SMFI--------QMKMSP--------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 F+ Q K +P A+ ++ + P++ F P+GL++YW+ Sbjct: 183 FSFLSILYSMNSQKKFNPQYSSSQTNAMAEGMNRSLMIFSPLMSYFIALQVPSGLVLYWT 242 Query: 544 WSNVISIVQQAVIM 557 SN+ I+QQ + Sbjct: 243 VSNLFQILQQFIAN 256 >gi|222530703|ref|YP_002574585.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor bescii DSM 6725] gi|222457550|gb|ACM61812.1| 60 kDa inner membrane insertion protein [Caldicellulosiruptor bescii DSM 6725] Length = 341 Score = 106 bits (265), Expect = 7e-21, Method: Composition-based stats. Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 34/254 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 W F+A P+ L+ + Y+ + ++GIAI+L T+ V+ L PL KQ ST+ M Sbjct: 4 TWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAIILLTLIVRGLLLPLYIKQIQSTSKMA 63 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P++ E+++K+K + +Q+ M++LY+ NP GCWP+L+QIP+ F++Y V Sbjct: 64 EVAPRLQEIQQKYKN-DQKKMQEEMLKLYQETGYNPAGGCWPLLIQIPILFSLYYVFQNP 122 Query: 451 LEMRHAPFWGWIKDLAAADPTN-----IFTLFGILPFYLPGFMH------VGIWPIIMSL 499 L ++KDL I L + F + + PI+ ++ Sbjct: 123 LVYVLGKSHQYVKDLITGATGYNITQRIVNEAQKLGLDMHFFGINLAQKELIVLPILSAV 182 Query: 500 SMFI--------QMKMSP--------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 F+ Q K +P A+ ++ + P++ F P+GL++YW+ Sbjct: 183 FSFLSILYSMNSQKKFNPQYSSSQTNAMAEGMNRSLMIFSPLMSYFIALQVPSGLVLYWT 242 Query: 544 WSNVISIVQQAVIM 557 SN+ I+QQ + Sbjct: 243 VSNLFQILQQFIAN 256 >gi|293553834|ref|ZP_06674449.1| membrane protein OxaA 2 [Enterococcus faecium E1039] gi|294620202|ref|ZP_06699536.1| membrane protein OxaA 2 [Enterococcus faecium E1679] gi|314940176|ref|ZP_07847354.1| putative OxaA-like protein [Enterococcus faecium TX0133a04] gi|314942407|ref|ZP_07849250.1| putative OxaA-like protein [Enterococcus faecium TX0133C] gi|314952317|ref|ZP_07855328.1| putative OxaA-like protein [Enterococcus faecium TX0133A] gi|314994240|ref|ZP_07859543.1| putative OxaA-like protein [Enterococcus faecium TX0133B] gi|314997155|ref|ZP_07862141.1| putative OxaA-like protein [Enterococcus faecium TX0133a01] gi|291593555|gb|EFF25095.1| membrane protein OxaA 2 [Enterococcus faecium E1679] gi|291602040|gb|EFF32277.1| membrane protein OxaA 2 [Enterococcus faecium E1039] gi|313588729|gb|EFR67574.1| putative OxaA-like protein [Enterococcus faecium TX0133a01] gi|313591327|gb|EFR70172.1| putative OxaA-like protein [Enterococcus faecium TX0133B] gi|313595576|gb|EFR74421.1| putative OxaA-like protein [Enterococcus faecium TX0133A] gi|313598807|gb|EFR77652.1| putative OxaA-like protein [Enterococcus faecium TX0133C] gi|313640615|gb|EFS05195.1| putative OxaA-like protein [Enterococcus faecium TX0133a04] Length = 316 Score = 106 bits (265), Expect = 7e-21, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395 + N ++G A++ TV V+++ PL Q T Sbjct: 45 PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453 +L+ + Q M Q+Y+ + ++ GC P+L+Q+P+F A+Y + + Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F+G DL + + I ++ +Q +S Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201 Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + Q + M P + VF S PAG+ +YW V S +Q + M + L + Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259 Query: 570 LRSTFSKNYNSQ 581 + +N Q Sbjct: 260 VAEELKQNPPKQ 271 >gi|256381073|ref|YP_003104733.1| 60 kDa inner membrane insertion protein [Actinosynnema mirum DSM 43827] gi|255925376|gb|ACU40887.1| 60 kDa inner membrane insertion protein [Actinosynnema mirum DSM 43827] Length = 358 Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 101/262 (38%), Gaps = 39/262 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ ++ + G + ++++ ++ L F Q S Sbjct: 1 MLNFIYYPVSFILWCWHWVFGRIFGESSGIAWALSVIFLVFTLRALLFKPFVGQVRSMRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ P++ ++++K+ Q + M +L H +NPL GC P+L+QIPVF ++ V+ Sbjct: 61 MQEFAPELQKIKKKYAN-DRQRQAQEMQKLQAEHGVNPLGGCLPMLVQIPVFIGLFHVLR 119 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFG---------------ILPFYLPGFMHVGI- 492 ++ D A D LFG + M V I Sbjct: 120 SFKPGWGEVYFF---DKAGVDSFVQAKLFGANLSTFITMPADQLELFSTSRTAVMAVAIP 176 Query: 493 WPIIMSLSMFIQ-----MKMSPPPADKGQAMIL-----NWMPVVFVFALSSFPAGLIIYW 542 ++ +++ + + A+ Q I+ P+ + FP +++YW Sbjct: 177 LAVVAAVATHFTGRHSVARQTQAAAENPQTAIMNKLVVYVFPLGALAGGFFFPVAILLYW 236 Query: 543 SWSNVISIVQQAVIMKMHGAEI 564 +N +++QQ V+ E Sbjct: 237 LSNNGWTLMQQRVVYGRIDREE 258 >gi|317133706|ref|YP_004093020.1| membrane protein insertase, YidC/Oxa1 family [Ethanoligenens harbinense YUAN-3] gi|315471685|gb|ADU28289.1| membrane protein insertase, YidC/Oxa1 family [Ethanoligenens harbinense YUAN-3] Length = 405 Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats. Identities = 72/311 (23%), Positives = 127/311 (40%), Gaps = 66/311 (21%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 F I P+ L+ + Y L N+G+AI+L T+ +++L PLA KQ S A+ +QP Sbjct: 6 FTNIFDIINIPLGFLLRFCYQLTNNYGLAIILLTLIIRILLVPLAVKQQKSMAHTVRLQP 65 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS---- 450 K+ L++K + Q LQ+ ++LY+ NP+ GC P+L Q+P+ + +Y VI Sbjct: 66 KLQALQKKHANNK-QKLQEEQMKLYQEEGANPMGGCLPLLFQLPILYGLYNVIYHPLLYI 124 Query: 451 -----------------------------------------LEMRHAPFWGWIKDLAAAD 469 +E+ A D + Sbjct: 125 VQLSVDVKNRVVYDLFSILKTTYPSVFGKMSTPSQALSNGQVEIYAAKLMPNHMDKLSFL 184 Query: 470 PTNI----FTLFGILPFYLPGF-MHVGIW-PIIMSLSMFIQMKM------------SPPP 511 P N+ F G+ +PG+ + + + PI LS FIQ+ + + P Sbjct: 185 PANVLKLDFNFLGLDLSVVPGWQISIYLLIPIFCYLSSFIQVWLSTRINKENNIAANAPG 244 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI--GLIDR 569 ++ MP++ + S P+G+ +YW SN+I + Q ++ K + + DR Sbjct: 245 TGGMNIGMMLIMPLMSAYISISVPSGVGLYWIASNLIMLAQILLLNKFYNPKELAEKYDR 304 Query: 570 LRSTFSKNYNS 580 + + Sbjct: 305 ESEHRKRERAA 315 >gi|77405816|ref|ZP_00782900.1| SpoIIIJ family protein [Streptococcus agalactiae H36B] gi|77412537|ref|ZP_00788832.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111] gi|77161405|gb|EAO72421.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111] gi|77175603|gb|EAO78388.1| SpoIIIJ family protein [Streptococcus agalactiae H36B] Length = 266 Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 78/213 (36%), Gaps = 27/213 (12%) Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL-- 427 L + K M +P + + E+ + + Q Q ++ + + ++ Sbjct: 34 LGLYQSWKASYQAEKMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGG 93 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+Q+P F AI+ + P F L Sbjct: 94 IGCLPLLIQMPFFSAIFFAARYT-------------------PGVSSATFLGLNLGQKSL 134 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 I I+ + ++ M+ P + ++ MP++ VF S PA + +YW + Sbjct: 135 TLTVIIAILYFVQSWLSMQGVPDEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGI 194 Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 SI+QQ V + + L ++ ++KN Sbjct: 195 FSIIQQLVTT--YVLKPKLRRKVEEEYTKNPPK 225 >gi|76799037|ref|ZP_00781232.1| Membrane protein oxaA 2 precursor [Streptococcus agalactiae 18RS21] gi|76585623|gb|EAO62186.1| Membrane protein oxaA 2 precursor [Streptococcus agalactiae 18RS21] Length = 266 Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 78/213 (36%), Gaps = 27/213 (12%) Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL-- 427 L + K M +P + + E+ + + Q Q ++ + + ++ Sbjct: 34 LGLYQSWKASYQAEKMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGG 93 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+Q+P F AI+ + P F L Sbjct: 94 IGCLPLLIQMPFFSAIFFAARYT-------------------PGVSSATFLGLNLGQKSL 134 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 I I+ + ++ M+ P + ++ MP++ VF S PA + +YW + Sbjct: 135 TLTVIIAILYFVQSWLSMQGVPDEQRQQMKTMMYLMPIMMVFMSISLPASVALYWFIGGI 194 Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 SI+QQ V + + L ++ ++KN Sbjct: 195 FSIIQQLVTT--YVLKPKLRRKVEEEYTKNPPK 225 >gi|257898075|ref|ZP_05677728.1| inner membrane protein [Enterococcus faecium Com15] gi|257835987|gb|EEV61061.1| inner membrane protein [Enterococcus faecium Com15] Length = 316 Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395 + N ++G A++ TV V+++ PL Q T Sbjct: 45 PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453 +L+ + Q M Q+Y+ + ++ GC P+L+Q+P+F A+Y + + Sbjct: 105 QQKLKAATTREEQMSAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F+G DL + + I ++ +Q +S Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201 Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + Q + M P + VF S PAG+ +YW V S +Q + M + L + Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVMM--KPRLKAQ 259 Query: 570 LRSTFSKNYNSQ 581 + +N Q Sbjct: 260 VAEELKQNPPKQ 271 >gi|312370989|gb|EFR19273.1| hypothetical protein AND_22764 [Anopheles darlingi] Length = 415 Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 82/231 (35%), Gaps = 37/231 (16%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + M + + + I + TV V+ L FPL + A M N P++ Sbjct: 108 WTPVGIVQNCMEFLHIGLDLPWWGCIAIGTVVVRTLLFPLVIASQKNAAKMNNHMPQMQV 167 Query: 399 LREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS- 450 L+ K ++ + ++ K +NPL L Q P+F + + + Sbjct: 168 LQVKMTEARQAGNAIDAARYGQELMLFMKEKKLNPLKNMLVPLAQAPIFISFFMGLREMA 227 Query: 451 ---LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++ W DL D PII S+++F+ +++ Sbjct: 228 NTPVDSMREGGLFWFTDLTVCDQFY-------------------ALPIITSMTLFLTIEL 268 Query: 508 ------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + IL +P+ +FP ++ YW+ SN S++Q Sbjct: 269 GTDSARMSAAGMQTAKYILRALPIFIFPFTINFPGAILCYWACSNFFSLLQ 319 >gi|324999878|ref|ZP_08120990.1| preprotein translocase subunit YidC [Pseudonocardia sp. P1] Length = 388 Score = 106 bits (264), Expect = 9e-21, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 107/266 (40%), Gaps = 40/266 (15%) Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ +M ++ + + ++++ ++L+ + Q S Sbjct: 1 MLDFIYYPVSFIMWVWHKVFGFVLGEDSGFAWALSVVFLVFTLRLILYKPFVTQVRSMRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ + P++ +LR+K+ Q L M +L + + NPL GC PIL+QIPVF ++ V+ Sbjct: 61 MQEMAPEMQKLRKKYAN-DRQKLATEMQKLQQQNGANPLMGCLPILVQIPVFIGLFHVLR 119 Query: 449 ISLEMRHAPFWGWIK--------DL------AAADPT-NIFTLFGILPFYLPGFMHVGIW 493 + ++ + DL +A P N ++ + Y+ ++ + Sbjct: 120 EFKPGKTENYFFNAQENASFVDSDLFGSKLGSAIFPLQNTASVTDLGGNYVAQWVVMVPL 179 Query: 494 PIIMSLSMFIQMKMS---------------PPPADKGQAMILNWMPVVFVFALSSFPAGL 538 I + I + S P A+ Q ++L P+ V P + Sbjct: 180 MIAAGIFTHITARHSVARQQAQIAAGTAAANPQAEIMQKLMLYVFPIGVVVGAPFLPLAV 239 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAEI 564 + YW +N+ ++ QQ + K AE Sbjct: 240 LFYWVSNNLWTLWQQHHVYKRIDAEE 265 >gi|257883078|ref|ZP_05662731.1| inner membrane protein [Enterococcus faecium 1,231,502] gi|257818736|gb|EEV46064.1| inner membrane protein [Enterococcus faecium 1,231,502] Length = 316 Score = 106 bits (264), Expect = 9e-21, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 92/252 (36%), Gaps = 39/252 (15%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395 + N ++G A++ TV V+++ PL Q T Sbjct: 45 PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQALKPQVEAA 104 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453 +L+ + Q M Q+Y+ + ++ GC P+L+Q+P+F A+Y + + Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F+G DL + + I ++ +Q +S Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGVAYLLQGYISTIGIP 201 Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + Q + M P + VF S PAG+ +YW V S +Q + + + L + Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVIM--KPRLKAQ 259 Query: 570 LRSTFSKNYNSQ 581 + +N Q Sbjct: 260 VAEELKQNPPKQ 271 >gi|320458433|dbj|BAJ69054.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 287 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 91/212 (42%), Gaps = 22/212 (10%) Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYK 420 M + +++ PL Q +T M+ +QP+I ++ K+ + +Q+ ++ L + Sbjct: 1 MCLVLIIRICLLPLFFSQMRATQRMQVLQPQIQRIQRKYAARKDPRSKEAMQREIMALQQ 60 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRHAPFWGWIKDLAAAD--PTNIFTL 476 HN NPL C L+Q P+ +++ + + +A I + A D ++IF + Sbjct: 61 RHNANPLGSCLLSLIQAPILCSLFYTLQSLPASAAGNAEPLSGIDRVMAGDIESSSIFGV 120 Query: 477 FGILPF----YLPGFMHVGIWPIIMSLSMFIQMKM-----SPP-PADKGQ---AMILNW- 522 F + +G+ +M L +F + +P D Q + + Sbjct: 121 RIADSFGTVVSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQFRTQKLTAFV 180 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 P ++V + + P G+++YW +N+ + Q Sbjct: 181 FPAIYVVSGGTLPFGVLLYWLTNNLWNFGQTL 212 >gi|292559000|gb|ADE32001.1| putative inner membrane protein [Streptococcus suis GZ1] Length = 304 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 39/259 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF----PLAKKQYVSTANMKN 391 W + + +A ++ + N FG+AI++ T+ V+L + K + M Sbjct: 36 WVYNFLVAPMGNLIKFFAENQGLGFGVAIIIVTLIVRLFIMPLGIYQSWKSTYQSEKMNY 95 Query: 392 IQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 ++P + ++E+ K + Q Q + K + ++ GC PIL+Q+P F A++ Sbjct: 96 LKPILGPIQERMKNASSQEEQLAAQQEYFAAQKQYGVSVFGGMGCLPILIQMPFFTALFY 155 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + A F G DL + I I + + Q Sbjct: 156 AARYTEGISEATFLG--IDLGS---------------------ASLILTAIAGILYYAQS 192 Query: 506 KMSPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + D+ Q + M P++ V S PAG+ +YW I +VQQA+ Sbjct: 193 LLMQVGMDEEQKKQMKAVAIMNPLMIVMFSWSSPAGVTLYWVVGGFIGLVQQALTN--FI 250 Query: 562 AEIGLIDRLRSTFSKNYNS 580 + + ++ F N Sbjct: 251 LKPRIRAKVEEEFKNNPPK 269 >gi|332358080|gb|EGJ35912.1| stage III sporulation protein J [Streptococcus sanguinis SK49] Length = 271 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 27/211 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I +L+EK+ + Sbjct: 46 RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + +LYK +NP A P+ +Q+PV A+++ ++ ++ + W+ +L A Sbjct: 106 TALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525 DPT I P++ +L F +S + G +++ MPV Sbjct: 164 DPTF-------------------ILPLLAALFTFFSTWLSNKALPERNGGMTVMMYLMPV 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V F +G+ +YW+ SN +VQ ++ Sbjct: 205 VIFFFALYAASGVALYWAVSNAYQVVQTLLL 235 >gi|149598665|ref|XP_001516970.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 411 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 88/235 (37%), Gaps = 36/235 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ Y + ++ + AI+ TV + L FPL K + N P+I Sbjct: 100 SYTPVGMVQNLLEYIHIDMGLPWWGAIVTCTVAARCLIFPLIVKGQREAVKINNHMPEIQ 159 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +L + ++ + + K H+++PL G L Q P+F + + + Sbjct: 160 KLSARMNEAKMSGDKFEFSRAYSDLQLYQKKHDVSPLRGFIVPLAQAPIFISFFIALREM 219 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + W DL ADP P++++ SM+ ++ Sbjct: 220 AYLPVPSMQSGGLLWFPDLTVADPFY-------------------ALPLLVTASMWAVLE 260 Query: 507 MSPPPA-DKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + + ++ MP+V + FP + YW SN+ S+ Q A + Sbjct: 261 LGAETGVNNANLRVMKTVIRVMPLVVLPFTIHFPTAVFTYWLSSNLFSLAQVAFL 315 >gi|306826338|ref|ZP_07459671.1| ParB/SpoJ family partitioning protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431451|gb|EFM34434.1| ParB/SpoJ family partitioning protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 277 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 104/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ D F+ F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ Sbjct: 31 DITADSTDFWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTILLPVFQTQMVASRKMQ 90 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L + M ++YK I + WPIL+Q+PV A+++ + Sbjct: 91 EAQPRIKALREQYPGRDMESRTKLDQEMRKVYKELGIKHSSSLWPILIQMPVLLALFQAL 150 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L D + + PI+ ++ F+ + Sbjct: 151 SR-VDFLKTGHFLWI-NLGGVDTSF-------------------VLPILAAVFTFLSSWL 189 Query: 508 SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ MP++ S P+G+ +YW+ SN ++Q + Sbjct: 190 SNKALSEKSGATTGMMYGMPILIFVFAISAPSGVALYWAVSNAYQVLQTYFLN 242 >gi|298345820|ref|YP_003718507.1| hypothetical protein HMPREF0573_10694 [Mobiluncus curtisii ATCC 43063] gi|304390476|ref|ZP_07372429.1| preprotein translocase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298235881|gb|ADI67013.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063] gi|304326232|gb|EFL93477.1| preprotein translocase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 441 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 28/256 (10%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 GW M L+ + +AI+ T+ V+L+ PL KQ ++ M QP+ Sbjct: 28 VGWVLRGVHEMITLLGVESGAGIGWVLAIVGMTIVVRLIIVPLFIKQIKASRAMSLAQPE 87 Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + + +K+K Q Q+ M + K + + A C P+L+Q+PV A+Y+++ Sbjct: 88 LTAITKKYKGKRDQQTMMRQQEEMKAVQKKYGASMSASCLPLLVQMPVLLALYRLLYYMS 147 Query: 452 EMRHAPF--------WGWIKDLAAADPTNIFTLFGILPFYLPGF----MHVGIWPIIMSL 499 + H G + A D T G F + +GI + + Sbjct: 148 AVAHGTMPEHVSIGGMGQQQAKALWDSTFFGESLGQTMFGPTSTLQTKIVIGIMVAFLVI 207 Query: 500 SMFIQMK-MSPPPADKGQ-----------AMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 +MF+Q +S Q ++ +MP+V++F GL+IYW+ SN Sbjct: 208 TMFVQTAFLSMKNMSDEQLNSDNPMVKSTKSMMYFMPLVYLFTGPVVQVGLLIYWATSNT 267 Query: 548 ISIVQQAVIMKMHGAE 563 S+VQQ +++ + Sbjct: 268 WSLVQQYFMIRAYPTR 283 >gi|22122905|gb|AAM92288.1| putative cytochrome oxidase assembly protein [Oryza sativa Japonica Group] gi|78708924|gb|ABB47899.1| Inner membrane protein OXA1-like, mitochondrial precursor, putative, expressed [Oryza sativa Japonica Group] Length = 413 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 96/242 (39%), Gaps = 34/242 (14%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E+ +F + ++ Y + G N+ I L TV ++ PL Q +T + Sbjct: 113 EVAAAAADSFFPVAALQHVIDYIHTFTGLNWWACIALATVLIRSATVPLLVNQLKATQKL 172 Query: 390 KNIQPKIDELREKF--KQSPPQVLQKAMI-QLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 I+P+++ ++E+ KA + L++ H ++P +L+Q P+F + + Sbjct: 173 NAIRPEMEAIKEEMNAMDPKSAKEGKAKMTALFQKHGVSPFTPLKGLLIQGPIFMSFFFA 232 Query: 447 ISISLE----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 I ++ M+ W DL DP I P++ +L Sbjct: 233 IRNMIDKVPSMKGGGS-LWFTDLTTPDPLY-------------------ILPVLTALIFL 272 Query: 503 IQMKMS---PPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + ++++ + + N+ M V+ V SF G+ YW SN+ ++ VI Sbjct: 273 VTVELNLQEGMEGNPMARKMKNFSRGMAVLTVPFTMSFAKGIFCYWITSNLFTLTYGFVI 332 Query: 557 MK 558 + Sbjct: 333 RR 334 >gi|315657685|ref|ZP_07910567.1| preprotein translocase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492157|gb|EFU81766.1| preprotein translocase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 441 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 28/256 (10%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 GW M L+ + +AI+ T+ V+L+ PL KQ ++ M QP+ Sbjct: 28 VGWVLRGVHEMITLLGVESGAGIGWVLAIVGMTIVVRLIIVPLFIKQIKASRAMSLAQPE 87 Query: 396 IDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + + +K+K Q Q+ M + K + + A C P+L+Q+PV A+Y+++ Sbjct: 88 LTAITKKYKGKRDQQTMMRQQEEMKAVQKKYGASMSASCLPLLVQMPVLLALYRLLYYMS 147 Query: 452 EMRHAPF--------WGWIKDLAAADPTNIFTLFGILPFYLPGF----MHVGIWPIIMSL 499 + H G + A D T G F + +GI + + Sbjct: 148 AVAHGTMPEHVSIGGMGQQQAKALWDSTFFGESLGQTMFGPTSTLQTKIVIGIMVAFLVI 207 Query: 500 SMFIQMK-MSPPPADKGQ-----------AMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 +MF+Q +S Q ++ +MP+V++F GL+IYW+ SN Sbjct: 208 TMFVQTAFLSMKNMSDEQLNSDNPMVKSTKSMMYFMPLVYLFTGPVVQVGLLIYWATSNT 267 Query: 548 ISIVQQAVIMKMHGAE 563 S+VQQ +++ + Sbjct: 268 WSLVQQYFMIRAYPTR 283 >gi|270290419|ref|ZP_06196644.1| preprotein translocase YidC subunit [Pediococcus acidilactici 7_4] gi|270281200|gb|EFA27033.1| preprotein translocase YidC subunit [Pediococcus acidilactici 7_4] Length = 322 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 32/255 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK----N 391 + + + + + G++G+AI+L T V+L+ PL Q + Sbjct: 35 FIYDNLAVPMQHFMDYLSHLVGGSYGLAIILITFVVRLILLPLMVNQSRKATVQQEKMSY 94 Query: 392 IQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 IQP++ L+E+ + + + M+ LY+ +NI+ GC P+L+Q PVF A+Y Sbjct: 95 IQPQLKVLQERNQTAKTPEEKAAVSQEMMALYRDNNISMTGGIGCLPLLIQFPVFAALYA 154 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ H + I ++ +I + L G + V Sbjct: 155 AIQYSPEL-HQGIFLGIDLSKSSLLLSIISFLVYLLQGWLGTLGV--------------- 198 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P K ++ P++ +F S PAGL +Y++ V + +Q +I Sbjct: 199 ---PEEQRKTMRSMMVISPLMILFFTFSTPAGLGLYFAVGGVFACIQTLLIN---FYRPR 252 Query: 566 LIDRLRSTFSKNYNS 580 + ++ KN Sbjct: 253 IRAQIHEEMKKNPPK 267 >gi|306791526|ref|ZP_07429828.1| membrane protein insertase, YidC/Oxa1 family [Mycobacterium tuberculosis SUMu005] gi|308339875|gb|EFP28726.1| membrane protein insertase, YidC/Oxa1 family [Mycobacterium tuberculosis SUMu005] Length = 394 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 100/265 (37%), Gaps = 39/265 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + + + + +++M ++ L + +Q +T M Sbjct: 10 LDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 69 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L++K+ Q + M +L + H NP+ GC P+L QIPVF +Y V+ Sbjct: 70 QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 128 Query: 450 ---SLEMRHAPFWGWIKD-------LAAADPTNIF--TLFGI---------------LPF 482 + P I++ + D + LFG + F Sbjct: 129 FNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGLDAFVDF 188 Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVVFVFAL 531 P + VG+ I+ ++ + + S A+ AM+ L P+ V Sbjct: 189 SRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFPLGVVVGG 248 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 P +I+YW +N+ + QQ + Sbjct: 249 PFLPLAIILYWFSNNIWTFGQQHYV 273 >gi|291004516|ref|ZP_06562489.1| putative inner membrane protein translocase component YidC [Saccharopolyspora erythraea NRRL 2338] Length = 350 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 106/277 (38%), Gaps = 39/277 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F FI P+ ++ +++ + + +++ ++++ A Q + Sbjct: 1 MFDFILYPVSAILWFWHKIFGFVLGPDNGFAWALSVFFLVFSLRVVLLKPAISQMRAGRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ P+I +LREK K Q + + M +L H +NPL GC P LLQIPVF +++ V+ Sbjct: 61 MQKFAPQIQKLREKHKN-DRQRMAQEMQKLQSEHGVNPLGGCLPALLQIPVFLSLFTVLR 119 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFG---------------ILPFYLPGFMHVGI- 492 + + +I D +FG + + VG+ Sbjct: 120 ---DFKPGAPSNYIFDADGVRSFVEADIFGAKLSNWIVQSDQELALFGTTRTDMIMVGVP 176 Query: 493 WPIIMSLSMFIQMKMSP------PPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYW 542 II S++ F M++S A+ AM+ + PV + + P +++YW Sbjct: 177 LMIIASVATFFSMRISMKRQTEAAMANPQTAMMGKLMMYIAPVGAIVSGPFLPIAVLLYW 236 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 +N ++ Q + E K Sbjct: 237 MANNFWTLGQAHFLTNKIDREEQKAKEAEIAAKKEAP 273 >gi|25010517|ref|NP_734912.1| hypothetical protein gbs0444 [Streptococcus agalactiae NEM316] gi|77414752|ref|ZP_00790879.1| SpoIIIJ family protein [Streptococcus agalactiae 515] gi|38503014|sp|Q8E6W4|OXAA1_STRA3 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|23094870|emb|CAD46088.1| Unknown [Streptococcus agalactiae NEM316] gi|77159202|gb|EAO70386.1| SpoIIIJ family protein [Streptococcus agalactiae 515] gi|319744392|gb|EFV96751.1| ParB/SpoJ family partitioning protein [Streptococcus agalactiae ATCC 13813] Length = 271 Score = 106 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 98/212 (46%), Gaps = 27/212 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 + + + G+ I+L T+ ++ + PL Q S+ M+ IQP++ EL++K+ P Sbjct: 46 QWLSFNHSIGLGIILFTLIIRAIMMPLYNMQMKSSQKMQEIQPRLKELQKKYPGKDPDSR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L M +YK +NP A P+L+Q+PV +A+++ ++ ++ F +L+ Sbjct: 106 LKLNDEMQSMYKAEGVNPYASVLPLLIQLPVLWALFQALTRVSFLKVGTFLS--LELSQP 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ---AMILNWMPV 525 DP I P++ +L F+ ++ A + ++ MP Sbjct: 164 DPYY-------------------ILPVLAALFTFLSTWLTNKAAVEKNIALTLMTYVMPF 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + +F +G+++YW+ SN + Q ++ Sbjct: 205 IILVTSFNFASGVVLYWTVSNAFQVFQILLLN 236 >gi|270293445|ref|ZP_06199653.1| SpoJ protein [Streptococcus sp. M143] gi|270278107|gb|EFA23956.1| SpoJ protein [Streptococcus sp. M143] Length = 270 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ D + F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ Sbjct: 25 DVAADSTDIWSKFVYFFAEIIRFLSFDVSIGVGIILFTILIRTILLPVFQTQMVASRKMQ 84 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I L+E++ + L + M ++YK + + WPIL+Q+PV A+++ + Sbjct: 85 EAQPRIKALQEQYPGRDMESRTKLDQEMRKVYKELGVKHSSSLWPILIQMPVLLALFQAL 144 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ + W+ +L D + I PI+ ++ F+ + Sbjct: 145 TR-VDFLKTGHFLWV-NLGGVDTSF-------------------ILPILAAVFTFLSSWL 183 Query: 508 SPPPADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ MPV+ S P+G+ +YW+ SN ++Q + Sbjct: 184 SNKALPERSGAMTGMMYGMPVLIFIFAISSPSGVALYWAVSNAYQVLQTYFLN 236 >gi|54027644|ref|YP_121886.1| putative inner membrane protein translocase component YidC [Nocardia farcinica IFM 10152] gi|54019152|dbj|BAD60522.1| putative membrane protein [Nocardia farcinica IFM 10152] Length = 359 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 111/296 (37%), Gaps = 53/296 (17%) Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ +++ + G + +A++ ++++ + KQ +T Sbjct: 1 MLDFIYWPVSWILWFWHRVFGFAFGADNGLTWALAVVFLVFTLRIVLYKPFVKQVRTTKQ 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP+I EL++K+K Q + M +L K H NPL GC P+L Q+PVF ++ V+ Sbjct: 61 MQELQPQIKELQKKYKN-DRQKMALEMQKLQKEHGFNPLMGCLPVLAQVPVFLGLFHVLR 119 Query: 449 ISLEMRH---------------APFWGWIKDLAAADPTNIFTL----------------- 476 H A + D+ + IF Sbjct: 120 SFNRTGHGFGQLGLTPEQNANTANYVFNAADVQSFLSARIFGAPISAFITTPQAEFLAFE 179 Query: 477 -FGILPFYLPGFMHVGIWPIIMSLSMFIQ-----MKMSPPPADKGQAMILN-----WMPV 525 +G +P L + +I L+ + +P A QA ++N P+ Sbjct: 180 DYGGIPSRLSIALVAIPLMVIAGLATHFNARASVARQTPEAAANPQAALMNKLALWVFPL 239 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + P +++YW +N+ + QQ ++ E + + + Sbjct: 240 GVLVGGPFLPIAILLYWVSNNIWTYGQQHLVFGRMAKEEEAKKQAKLEQRAQNAPK 295 >gi|256751458|ref|ZP_05492336.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter ethanolicus CCSD1] gi|256749677|gb|EEU62703.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter ethanolicus CCSD1] Length = 206 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 23/220 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IA + L+ + ++ VGN+GIAI++ T+ +++L P +Q + MK IQP + E Sbjct: 1 MTTIAVYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMNTMKKMKEIQPLVQE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L++K+ + PQ L ++LY+ +NP GC P+LL + + + ++ ++ A Sbjct: 61 LQKKYVK-DPQKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTAS- 118 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + WI LA DP I PI+ +++ +I M DK Q Sbjct: 119 FLWIHSLAQKDPYY-------------------IIPILAAVTTYISSAM--VATDKSQNS 157 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 158 MNIMMSIFMGWITVSLPAGVGIYWVTSNIFQIVQQYIFMR 197 >gi|116333652|ref|YP_795179.1| preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367] gi|116098999|gb|ABJ64148.1| Preprotein translocase subunit YidC [Lactobacillus brevis ATCC 367] Length = 300 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 99/263 (37%), Gaps = 40/263 (15%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + Y ++ + G++G AI++ TV V+++ P+ +Q S + Sbjct: 29 GKPYGFVYDYLAVPGQHVMDWLAHIFGGSYGWAIIILTVIVRMVLLPIMVRQMRSATVQQ 88 Query: 391 --------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 + + + Q +AM+ LY+ + I+ GC P+L+Q+P+F Sbjct: 89 EKISMIRPQMTALQKQQKAAKTPEEQQAASQAMMALYRNNGISMTGGIGCLPLLIQMPIF 148 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A+Y I S E+ + T+F +P + I ++ LS Sbjct: 149 AALYAAIRYSPELSN-------------------TVFLGIPLGKSSW----ILALLSFLS 185 Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +Q +S + Q + PV+ +F S PAGL +Y+ + + +Q +I Sbjct: 186 YLLQGYLSMLGMPEDQKKQMRMTLLLSPVMILFFTMSSPAGLGLYFFVGGLFACLQTLII 245 Query: 557 MKMHGAEIGLIDRLRSTFSKNYN 579 + ++ Sbjct: 246 N---FYRPRIRREIKEKMKDQPA 265 >gi|188587521|ref|YP_001919066.1| 60 kDa inner membrane insertion protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352208|gb|ACB86478.1| 60 kDa inner membrane insertion protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 213 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 66/233 (28%), Positives = 119/233 (51%), Gaps = 26/233 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 I + ++S+FY L G++G+AI++ T+ V+ L FPL KQ ST M+ +QP++ Sbjct: 1 MLDPIISVLGSILSFFYELTGSYGLAIVILTIGVRALTFPLMAKQMQSTNKMQELQPELK 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA- 456 +L+EK+K L K ++L+K H +NP AGC P+++Q+PV A+++++ + Sbjct: 61 KLQEKYKDDKET-LNKKTMELWKKHKVNPAAGCLPLIVQMPVLIAMFRLLRDYQQFLGDV 119 Query: 457 -PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 P + I DL+ +DP I PI+ + F+Q K++ Sbjct: 120 DPVFLGI-DLSQSDPFF-------------------ILPILAGGTTFLQQKLTMTSQSNS 159 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 M++ + +F S+ PAGL +Y+ N+ S++ ++MK + E Sbjct: 160 SMMMIMP--FMIIFISSTLPAGLPLYFVVGNIFSLI-AHLVMKKNKPETQKEG 209 >gi|167038671|ref|YP_001666249.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167041021|ref|YP_001664006.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter sp. X514] gi|300913768|ref|ZP_07131085.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter sp. X561] gi|307725546|ref|YP_003905297.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter sp. X513] gi|320117063|ref|YP_004187222.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855261|gb|ABY93670.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter sp. X514] gi|166857505|gb|ABY95913.1| 60 kDa inner membrane insertion protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|300890453|gb|EFK85598.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter sp. X561] gi|307582607|gb|ADN56006.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter sp. X513] gi|319930154|gb|ADV80839.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 206 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 23/220 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IA + L+ + ++ VGN+GIAI++ T+ +++L P +Q + MK IQP + E Sbjct: 1 MTTIAVYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMNTMKKMKEIQPLVQE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L++K+ + PQ L ++LY+ +NP GC P+LL + + + ++ ++ A Sbjct: 61 LQKKYAK-DPQKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTAS- 118 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + WI LA DP I PI+ +++ +I M DK Q Sbjct: 119 FLWIHSLAQKDPYY-------------------IIPILAAVTTYISSAM--VATDKSQNS 157 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 158 MNIMMSIFMGWITVSLPAGVGIYWVTSNIFQIVQQYIFMR 197 >gi|325686634|gb|EGD28660.1| stage III sporulation protein J [Streptococcus sanguinis SK72] Length = 271 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 27/211 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I +L+EK+ + Sbjct: 46 RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKQLQEKYPGKDMESR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + +LYK INP A P+ +Q+PV A+++ ++ ++ + W+ +L A Sbjct: 106 TALAEETQKLYKEKGINPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525 DPT I P++ +L F +S + G +++ MPV Sbjct: 164 DPTF-------------------ILPLLAALFTFFSTWLSNKALPERNGGMTVMMYLMPV 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V F +G+ +YW+ SN +VQ ++ Sbjct: 205 VIFFFALYAASGVALYWAVSNAYQVVQTLLL 235 >gi|304384699|ref|ZP_07367045.1| membrane protein [Pediococcus acidilactici DSM 20284] gi|304328893|gb|EFL96113.1| membrane protein [Pediococcus acidilactici DSM 20284] Length = 322 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 32/255 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK----N 391 + + + + + G++G+AI+L T V+L+ PL Q + Sbjct: 35 FIYDNLAVPMQHFMDYLSHLVGGSYGLAIILITFVVRLILLPLMVNQSRKATVQQEKMSY 94 Query: 392 IQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 IQP++ L+E+ + + + M+ LY+ +NI+ GC P+L+Q PVF A+Y Sbjct: 95 IQPQLKVLQERNQTAKTPEEKAAVSQEMMALYRDNNISMTGGIGCLPLLIQFPVFAALYA 154 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ H + I ++ +I + L G + V Sbjct: 155 AIQYSPEL-HQGIFLGIDLSKSSLLLSIISFLVYLLQGWLGTLGV--------------- 198 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P K ++ P++ +F S PAGL +Y++ V + +Q +I Sbjct: 199 ---PEEQRKTMRSMMVISPLMILFFTFSTPAGLGLYFAVGGVFACIQTLLIN---FYRPR 252 Query: 566 LIDRLRSTFSKNYNS 580 + ++ KN Sbjct: 253 IRAQIHEEMKKNPPK 267 >gi|22536592|ref|NP_687443.1| SpoIIIJ family protein [Streptococcus agalactiae 2603V/R] gi|76799479|ref|ZP_00781620.1| Membrane protein oxaA 1 precursor [Streptococcus agalactiae 18RS21] gi|77412336|ref|ZP_00788649.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111] gi|38502994|sp|Q8CX16|OXAA1_STRA5 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|22533428|gb|AAM99315.1|AE014210_5 SpoIIIJ family protein [Streptococcus agalactiae 2603V/R] gi|76585169|gb|EAO61786.1| Membrane protein oxaA 1 precursor [Streptococcus agalactiae 18RS21] gi|77161625|gb|EAO72623.1| SpoIIIJ family protein [Streptococcus agalactiae CJB111] Length = 271 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 98/212 (46%), Gaps = 27/212 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 + + + G+ I+L T+ ++ + PL Q S+ M+ IQP++ EL++K+ P Sbjct: 46 QWLSFNHSIGLGIILFTLIIRAIMMPLYNMQMKSSQKMQEIQPRLKELQKKYPGKDPDNR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L M +YK +NP A P+L+Q+PV +A+++ ++ ++ F +L+ Sbjct: 106 LKLNDEMQSMYKAEGVNPYASVLPLLIQLPVLWALFQALTRVSFLKVGTFLS--LELSQP 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ---AMILNWMPV 525 DP I P++ +L F+ ++ A + ++ MP Sbjct: 164 DPYY-------------------ILPVLAALFTFLSTWLTNKAAVEKNIALTLMTYVMPF 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + +F +G+++YW+ SN + Q ++ Sbjct: 205 IILVTSFNFASGVVLYWTVSNAFQVFQILLLN 236 >gi|320547570|ref|ZP_08041855.1| ParB/SpoJ family partitioning protein [Streptococcus equinus ATCC 9812] gi|320447645|gb|EFW88403.1| ParB/SpoJ family partitioning protein [Streptococcus equinus ATCC 9812] Length = 271 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 102/233 (43%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E+ + F + ++ G G+ I+L T+ ++ + PL Q S+ M+ Sbjct: 25 EVTASSTNGWEQIVYFFAKAIQWLSINGRIGVGIILFTIIIRAILMPLFNMQIKSSQKMQ 84 Query: 391 NIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++QP++ +L+EK+ L + LYK + +NP A P+++Q+P+ A+Y+ + Sbjct: 85 DLQPELKKLQEKYPGRDTDSRMKLTEESQALYKEYGVNPYATMLPLVIQLPILMALYQAL 144 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ + WI+ L+ DP I P++ + F+ + Sbjct: 145 TRVAFLK-TGTFLWIE-LSQPDPYY-------------------ILPVLAAFFTFLSTWL 183 Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S A + M+ MP++ F +G+++YWS S + Q V+ Sbjct: 184 SNKAAREKNMAMTMMTYVMPIMIFFLAFRLASGVVLYWSVSYAFQVFQVLVLN 236 >gi|261209462|ref|ZP_05923825.1| inner membrane protein [Enterococcus faecium TC 6] gi|289566873|ref|ZP_06447281.1| OxaA-like protein precursor [Enterococcus faecium D344SRF] gi|260076590|gb|EEW64354.1| inner membrane protein [Enterococcus faecium TC 6] gi|289161322|gb|EFD09214.1| OxaA-like protein precursor [Enterococcus faecium D344SRF] Length = 316 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 91/252 (36%), Gaps = 39/252 (15%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-------- 395 + N ++G A++ TV V+++ PL Q T Sbjct: 45 PMGQAITYLVENFNWSYGWAVIAMTVIVRIIILPLGISQSKKTMIQSEKMQVLKPQVEAA 104 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453 +L+ + Q M Q+Y+ + ++ GC P+L+Q+P+F A+Y + + Sbjct: 105 QQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQMPIFSALYFTARYTEGI 164 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 R + F+G DL + + I + +Q +S Sbjct: 165 RESSFYG--IDLGSP---------------------SMVLVAIAGGAYLLQGYISTIGIP 201 Query: 514 KGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + Q + M P + VF S PAG+ +YW V S +Q + + + L + Sbjct: 202 EEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQTFITNVIM--KPRLKAQ 259 Query: 570 LRSTFSKNYNSQ 581 + +N Q Sbjct: 260 VAEELKQNPPKQ 271 >gi|125575428|gb|EAZ16712.1| hypothetical protein OsJ_32188 [Oryza sativa Japonica Group] Length = 413 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 96/242 (39%), Gaps = 34/242 (14%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E+ +F + ++ Y + G N+ I L TV ++ PL Q +T + Sbjct: 113 EVAAAAADSFFPVAALQHVIDYIHTFTGLNWWACIALATVLIRSATVPLLVNQLKATQKL 172 Query: 390 KNIQPKIDELREKF--KQSPPQVLQKAMI-QLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 I+P+++ ++E+ KA + L++ H ++P +L+Q P+F + + Sbjct: 173 NAIRPEMEAIKEEMNAMDPKSAKEGKAKMTALFQKHGVSPFTPLKGLLIQGPIFMSFFFA 232 Query: 447 ISISLE----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 I ++ M+ W DL DP I P++ +L Sbjct: 233 IRNMIDKVPSMKGGGS-LWFTDLTTPDPLY-------------------ILPVLTALIFL 272 Query: 503 IQMKMS---PPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + ++++ + + N+ M V+ V SF G+ YW SN+ ++ VI Sbjct: 273 VTVELNLQEGMEGNPMARKMKNFSRGMAVLTVPFTMSFAKGIFCYWITSNLFTLTYGFVI 332 Query: 557 MK 558 + Sbjct: 333 RR 334 >gi|312876167|ref|ZP_07736154.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor lactoaceticus 6A] gi|311796982|gb|EFR13324.1| membrane protein insertase, YidC/Oxa1 family [Caldicellulosiruptor lactoaceticus 6A] Length = 341 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 34/254 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 W F+A P+ L+ + Y+ + ++GIA++L T+ V+ L PL KQ ST+ M Sbjct: 4 TWLDFLAIPLGRLLKFIYDFLHGAHIPGSYGIAVILLTLIVRGLLLPLYIKQIQSTSKMA 63 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P++ E+++K+K ++ Q+ M++LY+ NP GCWP+L+Q+P+ F++Y V Sbjct: 64 EVAPRLQEIQQKYKNDQRKM-QEEMLKLYQETGYNPAGGCWPLLIQLPILFSLYYVFQNP 122 Query: 451 LEMRHAPFWGWIKDLAAA-----------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 L ++KDL D L + + PI+ + Sbjct: 123 LVYVLGKSHQYVKDLITGATGYNITQRIVDEAQKLGLDMHFFGINLAQKELIVLPILSAA 182 Query: 500 SMFI--------QMKMSPPPADKGQAMI--------LNWMPVVFVFALSSFPAGLIIYWS 543 F+ Q K +P + + + + P++ F P+GL++YW+ Sbjct: 183 FSFLSILYSMNSQKKFNPQYSQSQSNAMAESINRSLMIFSPLMSYFIALQVPSGLVLYWT 242 Query: 544 WSNVISIVQQAVIM 557 +N+ +I+QQ + Sbjct: 243 VTNLFTILQQFIAN 256 >gi|257462451|ref|ZP_05626864.1| inner membrane protein [Fusobacterium sp. D12] gi|317060110|ref|ZP_07924595.1| inner membrane protein YIDC [Fusobacterium sp. D12] gi|313685786|gb|EFS22621.1| inner membrane protein YIDC [Fusobacterium sp. D12] Length = 125 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 21/141 (14%) Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 H +NP GC P+++Q+P+ FA++ V+ + + + W++ L DP IF Sbjct: 4 SNKHKVNPAGGCLPLIIQLPILFALFGVLRGGI-IPEDSKFLWLE-LTKPDPFYIF---- 57 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 P++ F Q K+ + ++ P++ +F P GL Sbjct: 58 ---------------PLLNGAVSFFQQKLMGNSDNPQMKNMMYMFPIMMIFISYKMPGGL 102 Query: 539 IIYWSWSNVISIVQQAVIMKM 559 +YW S++ +++QQ IMK Sbjct: 103 QLYWLTSSLTAVLQQYFIMKK 123 >gi|300857413|ref|YP_003782397.1| putative membrane protein OxaA [Clostridium ljungdahlii DSM 13528] gi|300437528|gb|ADK17295.1| predicted membrane protein OxaA [Clostridium ljungdahlii DSM 13528] Length = 218 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 26/234 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + F + S N ++GIAI+L T+ ++++ PL KQ S+ M IQP++ Sbjct: 8 FVQFFEFLHHSVTSVIPNQNMSYGIAIILMTIIIRIIILPLGIKQARSSLIMNEIQPEVK 67 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+EK+ + PQ Q+ M++LYK +P +GC P+L+Q P+ A+Y V + + Sbjct: 68 KLQEKY-KKDPQKAQQEMMKLYKEKGASPFSGCLPLLIQWPILIALYYVFNNLSGINGVS 126 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--PADKG 515 + WI DLA D I+ ++ F+ + Sbjct: 127 -FLWIGDLAKTDIF---------------------LAILSGVTTFLSGYLMMSGNSEQAK 164 Query: 516 QAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 QA +N M V VF F A L++YW SN+I I Q V+ K+ + + Sbjct: 165 QAKTMNIAMSAVMVFMSIKFKAALVLYWVVSNLIQIAQTVVLKKIEMKKGNIKA 218 >gi|213693342|ref|YP_002323928.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524803|gb|ACJ53550.1| 60 kDa inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459524|dbj|BAJ70145.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 335 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 103/248 (41%), Gaps = 22/248 (8%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + F +M + ++ +AI++ + V+ FPL KQ S M Sbjct: 20 LTPVEWLQTWIMKIVHDFFVMLGMSPIGVSWVLAIIILVLVVQACIFPLFCKQMKSMRKM 79 Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + + PK+ ++ K+K Q + + ++LY+ ++ NP C P+L+Q PVF +++ Sbjct: 80 QALAPKMKRIQNKYKGKTDQASKEAMSRETMKLYQDNDANPAGSCLPMLIQGPVFMSMFY 139 Query: 446 VISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIM 497 +S + D+A A +FGI+ G + +G + +M Sbjct: 140 TLSAIPYIANGKRGALGAFDVATAKQFTQTDVFGIVSVTDNFSRAATSGKVVIGTFVFLM 199 Query: 498 SLSMFIQMKMSPPPADK----------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 ++ + Q +L PV+++F+ ++ P +++YW +NV Sbjct: 200 CFCLWFMQYFNMKRNMPAASMNKQAETMQKAMLWLFPVMYIFSGATMPFAVLVYWLTNNV 259 Query: 548 ISIVQQAV 555 ++ + Sbjct: 260 CNLCRTLW 267 >gi|296167146|ref|ZP_06849553.1| membrane protein OxaA [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897468|gb|EFG77067.1| membrane protein OxaA [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 369 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 109/287 (37%), Gaps = 48/287 (16%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAK 380 E+L D+ F+ P+ +M +Y L + +++M ++ L + Sbjct: 1 MELLFDFFSLDFVYYPVSWIMWAWYKLFAAMLGPSNFFAWALSVMFLVFSLRALLYKPFV 60 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 +Q +T M+ +QP+I L++K+ Q + M +L + H NP+ GC P+L QIPVF Sbjct: 61 RQIRTTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVF 119 Query: 441 FAIYKVISI---SLEMRHAPFWGWIKD-------LAAADPTNIF--TLFGILP------- 481 +Y V+ + P ++ + D + LFG Sbjct: 120 IGLYHVLRSFNRTTGGFGQPHLSVAQNRLTGNYVFSPTDVGHFLDANLFGAPIGAFMTQR 179 Query: 482 --------FYLPGFMHVGI-WPIIMSLSMFIQMK-----MSPPPADKGQAMIL-----NW 522 F P + VG I+ ++ + + SP A Q ++ Sbjct: 180 TGLDAFTYFSRPAVIAVGAPVMILAGIATYFNSRASVARQSPEAAANPQTAMMNKLALYV 239 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P+ V P +I+YW +N+ + QQ + M E + Sbjct: 240 FPLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQ 286 >gi|253800971|ref|YP_003033973.1| hypothetical protein TBMG_03969 [Mycobacterium tuberculosis KZN 1435] gi|253322475|gb|ACT27078.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435] Length = 366 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 100/265 (37%), Gaps = 39/265 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + + + + +++M ++ L + +Q +T M Sbjct: 10 LDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 69 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L++K+ Q + M +L + H NP+ GC P+L QIPVF +Y V+ Sbjct: 70 QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 128 Query: 450 ---SLEMRHAPFWGWIKD-------LAAADPTNIF--TLFGI---------------LPF 482 + P I++ + D + LFG + F Sbjct: 129 FNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGLDAFVDF 188 Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVVFVFAL 531 P + VG+ I+ ++ + + S A+ AM+ L P+ V Sbjct: 189 SRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFPLGVVVGG 248 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 P +++YW +N+ + QQ + Sbjct: 249 PFLPLAIVLYWFSNNIWTFGQQHYV 273 >gi|134097490|ref|YP_001103151.1| putative inner membrane protein translocase component YidC [Saccharopolyspora erythraea NRRL 2338] gi|133910113|emb|CAM00226.1| 60 kDa membrane insertion protein [Saccharopolyspora erythraea NRRL 2338] Length = 342 Score = 105 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 95/246 (38%), Gaps = 30/246 (12%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + +++ ++++ A Q + M+ P+I +LREK K Q + + M +L Sbjct: 24 WALSVFFLVFSLRVVLLKPAISQMRAGRKMQKFAPQIQKLREKHKN-DRQRMAQEMQKLQ 82 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG- 478 H +NPL GC P LLQIPVF +++ V+ + + +I D +FG Sbjct: 83 SEHGVNPLGGCLPALLQIPVFLSLFTVLR---DFKPGAPSNYIFDADGVRSFVEADIFGA 139 Query: 479 --------------ILPFYLPGFMHVGI-WPIIMSLSMFIQMKMSP------PPADKGQA 517 + + VG+ II S++ F M++S A+ A Sbjct: 140 KLSNWIVQSDQELALFGTTRTDMIMVGVPLMIIASVATFFSMRISMKRQTEAAMANPQTA 199 Query: 518 MI----LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 M+ + PV + + P +++YW +N ++ Q + E Sbjct: 200 MMGKLMMYIAPVGAIVSGPFLPIAVLLYWMANNFWTLGQAHFLTNKIDREEQKAKEAEIA 259 Query: 574 FSKNYN 579 K Sbjct: 260 AKKEAP 265 >gi|313660934|ref|ZP_07817814.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis KZN V2475] Length = 363 Score = 105 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 100/265 (37%), Gaps = 39/265 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + + + + +++M ++ L + +Q +T M Sbjct: 7 LDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 66 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L++K+ Q + M +L + H NP+ GC P+L QIPVF +Y V+ Sbjct: 67 QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 125 Query: 450 ---SLEMRHAPFWGWIKD-------LAAADPTNIF--TLFGI---------------LPF 482 + P I++ + D + LFG + F Sbjct: 126 FNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGLDAFVDF 185 Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVVFVFAL 531 P + VG+ I+ ++ + + S A+ AM+ L P+ V Sbjct: 186 SRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFPLGVVVGG 245 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 P +++YW +N+ + QQ + Sbjct: 246 PFLPLAIVLYWFSNNIWTFGQQHYV 270 >gi|310641889|ref|YP_003946647.1| oxaa-like protein [Paenibacillus polymyxa SC2] gi|309246839|gb|ADO56406.1| OxaA-like protein [Paenibacillus polymyxa SC2] Length = 277 Score = 105 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 37/241 (15%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----I 392 + +++ P+ L+ + G+FG+AIM T V+L PL +Q + MK + Sbjct: 47 FNHYVVFPLSWLIQHLAQWFGGSFGLAIMTLTFIVRLALLPLMMRQTRAQQGMKRKMSAM 106 Query: 393 QPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLA-GCWPILLQIPVFFAIYKVI 447 QP +D +++K++ Q +Q+ M+ LYK H NPL GC PIL+Q+P+ +Y I Sbjct: 107 QPDLDRIKKKYENKKDANSQQSMQQEMMSLYKEHQFNPLNIGCLPILIQLPILSGMYTAI 166 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++ E+ + W + L D I I++++ Q K+ Sbjct: 167 RLTPELASHS-FLWFR-LGQPD---------------------WILAIVVAVVYLAQAKL 203 Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 S Q M P++ + PA + +YW+ S ++Q K + E Sbjct: 204 SQLQMTADQHKQFAIMGYLSPIMMAVFSFNAPAAMPLYWTVSGTFLLLQSLWFRKRYPIE 263 Query: 564 I 564 Sbjct: 264 E 264 >gi|304414030|ref|ZP_07395398.1| putative inner membrane protein [Candidatus Regiella insecticola LSR1] gi|304283244|gb|EFL91640.1| putative inner membrane protein [Candidatus Regiella insecticola LSR1] Length = 380 Score = 105 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 103/271 (38%), Gaps = 19/271 (7%) Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM----FMLMSYFY 354 KS T G + + D F+ + + + +L+ Sbjct: 114 HKSDTENQVSSMGKTRAQLLLKSDLDQLPQYFQKIKYAHLWAPLRLLCLGIEAILLWLNT 173 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-QSPPQVLQK 413 +GI I+L ++ KL P + + ++Q ++ E K + + Sbjct: 174 IHSFGWGITIILLSLLFKLFILPANILLTRAQRKVSHLQARLAPELEYIKANFTGEEAHQ 233 Query: 414 AMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + ++K ++P L P AI+ V+S + P + WI+DLA D Sbjct: 234 KFMAVHKQQGVSPFYNLRSLLLTLAPFPFLIAIFNVLSEMDLIAGHP-FLWIEDLAYPD- 291 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-----QMKMSPPPADKGQAMILNWMPV 525 I+ L +P + + PI+M+L + Q K+ + Q + L +M Sbjct: 292 -AIYHLGFHIPLLGAS---INLLPILMTLLTILAAVIHQNKIISTKELRKQKLNLYFMAE 347 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 F FP+ +++YW ++N+ ++QQ + Sbjct: 348 GFFLLFYPFPSTMVLYWIFANIWQLIQQRFV 378 >gi|319946179|ref|ZP_08020419.1| ParB/SpoJ family partitioning protein [Streptococcus australis ATCC 700641] gi|319747561|gb|EFV99814.1| ParB/SpoJ family partitioning protein [Streptococcus australis ATCC 700641] Length = 271 Score = 105 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 94/224 (41%), Gaps = 30/224 (13%) Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTH 422 L T+ ++ + P+ + Q S+ M+ IQP + E++ K+ + + M LYK Sbjct: 60 LFTLLIRTILLPVFQYQMTSSRKMQEIQPLVKEIQAKYPGKDLESRTRMSEEMRALYKEK 119 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 + + P+ +Q+PV A+++ +S +E + W+ D++A DPT Sbjct: 120 GVKTSSAFLPLFIQMPVLMALFQALSR-VEFLKVGHFLWL-DMSATDPTF---------- 167 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 I P++ ++ F +S P + G ++ MPV+ F +G+ Sbjct: 168 ---------ILPVLAAVFTFFSTWLSNKAMPEKNGGMTAMMYAMPVMIFFFAMYSASGVA 218 Query: 540 IYWSWSNVISIVQQAVIM---KMHGAEIGLIDRLRSTFSKNYNS 580 +YW SN + Q ++ K+ A ++ + + Sbjct: 219 LYWVVSNAYQVGQTYLLNNPFKIIAAREAEQQAIKDIEKQKRRA 262 >gi|226467554|emb|CAX69653.1| preprotein translocase YidC subunit [Schistosoma japonicum] Length = 367 Score = 105 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 97/257 (37%), Gaps = 33/257 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 Y+ ++ + + I TT+ ++L FP+ +Q AN + P+ Sbjct: 67 NSYWPWGWYQCMLETLHVHLELPWWGAIAATTIAIRLCVFPIIIRQRRHLANFTDNMPQF 126 Query: 397 DELREKF-------KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 L+E+ + M +L K +++NPL + LQ+P+F +++ I Sbjct: 127 TILQERMTRARLSGNYIEVMRASQEMNELMKNNDLNPLKSLKYMFLQVPIFLSVFTGIRG 186 Query: 450 SLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + W DL A+DP I LPF + + F Sbjct: 187 LVNLPVTSMQSGGIAWFTDLTASDPYYI------LPFLSMSTLLLV----------FETG 230 Query: 506 KMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM----KMH 560 +P P ++ P++ + + P+ L+ YW+ SN++S +Q ++ + + Sbjct: 231 AETPSPHIQPVVRTVMRVFPIIGFVFVVNMPSALVWYWTVSNMLSFLQSLILRYPPFRSY 290 Query: 561 GAEIGLIDRLRSTFSKN 577 + L K Sbjct: 291 FNLPPVRAPLSVVNKKR 307 >gi|317509424|ref|ZP_07967042.1| YidC/Oxa1 family membrane protein insertase [Segniliparus rugosus ATCC BAA-974] gi|316252253|gb|EFV11705.1| YidC/Oxa1 family membrane protein insertase [Segniliparus rugosus ATCC BAA-974] Length = 320 Score = 105 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 109/300 (36%), Gaps = 59/300 (19%) Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F+ P+ ++ ++ + + ++++ ++ L + A +Q Sbjct: 1 MLDFVYYPVSGVLWLWHWVFSQILGPESGFGWALSVVALVCTLRALLYAPAIRQIRFMRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447 M+ IQP++ ++ K+ + Q M +L K H NPL GC P+LLQIPVF +Y V+ Sbjct: 61 MQEIQPQMKAIQTKYAK-DRQRQALEMQKLQKEHGFNPLLGCLPMLLQIPVFIGLYHVLS 119 Query: 448 ----------------------------------SISLEMR--HAPFWGWIKDLAAADPT 471 LE R P +I + AA+ Sbjct: 120 SFNRTAGAFFSGGGSMTPEQNRNTKNYVFSPHDVQSFLESRFFGVPLSSYITEPAASFNA 179 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSPPPAD---KGQAMILNWM--- 523 I + +I S++ + + +S PAD + QA ++ M Sbjct: 180 FIKAGSAVDFQRWQIAAVAIPLMLIASVATHMNSRASLSRQPADVSEQPQAAMMRVMSLW 239 Query: 524 --PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR--LRSTFSKNYN 579 P+ + + P L++YW +N + QQ ++ + E R + + Sbjct: 240 VFPLGVLIFGWASPIALLLYWVSNNAWTYGQQHLVFRKIDREDEEKKRQAVERRAANAPK 299 >gi|77414384|ref|ZP_00790539.1| SpoIIIJ family protein [Streptococcus agalactiae 515] gi|77159574|gb|EAO70730.1| SpoIIIJ family protein [Streptococcus agalactiae 515] Length = 266 Score = 105 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 77/213 (36%), Gaps = 27/213 (12%) Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL-- 427 L + K M +P + + E+ + + Q Q ++ + + ++ Sbjct: 34 LGLYQSWKASYQAEKMAYFKPLFEPINERLRNAKTQEEKLAAQTELMTAQRENGLSMFGG 93 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+Q+P F AI+ + P F L Sbjct: 94 IGCLPLLIQMPFFSAIFFAARYT-------------------PGVSSATFLGLNLGQKSL 134 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 I I+ + ++ M+ P + ++ MP+ VF S PA + +YW + Sbjct: 135 TLTVIIAILYFVQSWLSMQGVPDEQRQQMKTMMYVMPIAMVFMSISLPASVALYWFIGGI 194 Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 SI+QQ V + + L ++ ++KN Sbjct: 195 FSIIQQLVTT--YVLKPKLRRKVEEEYTKNPPK 225 >gi|254818675|ref|ZP_05223676.1| putative inner membrane protein translocase component YidC [Mycobacterium intracellulare ATCC 13950] Length = 362 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 100/285 (35%), Gaps = 41/285 (14%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 + + + + + + +++M ++ L + +Q Sbjct: 2 SFDVFSLDFVYYPVSWIMWVWYKLFASMLGPSNFFAWALSVMFLVFSLRALLYKPFVRQI 61 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +T M+ +QP+I L++K+ Q + M +L + H NP+ GC P+L QIPVF + Sbjct: 62 RTTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFIGL 120 Query: 444 YKVISI---SLEMRHAPFWGWI------------KDLAAADPTNIFT------------L 476 Y V+ + P D+A N+F L Sbjct: 121 YHVLRSFNRTTGGFGQPHLSVAENRLTGNYVFTPTDVAHFLDANLFGAPIGAFMTQRTGL 180 Query: 477 FGILPFYLPGFMHVGIWP--IIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWMP 524 F P + VG P I+ ++ + + SP A Q ++ P Sbjct: 181 DAFTVFSRPAVIAVG-LPVMILAGVATYFNSRASVARQSPEAAANPQTAMMNKLALYVFP 239 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + V P +I+YW +N+ + QQ + M E + Sbjct: 240 LGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQ 284 >gi|314935960|ref|ZP_07843310.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80] gi|313655966|gb|EFS19708.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80] Length = 289 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 106/265 (40%), Gaps = 43/265 (16%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 ++ +PM ++ + + ++GIAI++ + ++++ P Y ++ M+ Sbjct: 32 FYNTFVEPMAKILHWLGHSVFHDDYGIAIIVLVLVIRIILLPFMLSNYKNSHMMREKMKI 91 Query: 396 --------IDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + M+++YK ++INP+ GC P+L+Q+P+ +Y Sbjct: 92 AKPEVEGVQEKVKRARTQEEKMAANQEMMEVYKKYDINPMKSALGCLPVLIQMPIVMGLY 151 Query: 445 KVISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ + + P + W +L D II + F Sbjct: 152 FVLRYRIGGGITEHPHFLWF-NLVHPDIW---------------------ITIIAGVLYF 189 Query: 503 IQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 IQ +S + Q + M P++ ++ S + L +YWS S I+Q K Sbjct: 190 IQAWVSSKQMPEEQRQMTYMMMIVSPIMIIWISLSSASALGLYWSVSAAFLIIQTFFANK 249 Query: 559 MHG--AEIGLIDRLRSTFSKNYNSQ 581 + A+ + + + N N + Sbjct: 250 HYEKVAKQEIGPMVEAHKENNSNKK 274 >gi|322374156|ref|ZP_08048690.1| SpoIIIJ family protein [Streptococcus sp. C150] gi|321277122|gb|EFX54193.1| SpoIIIJ family protein [Streptococcus sp. C150] Length = 268 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 25/195 (12%) Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNIN 425 T+ ++ + PL +Q S+ ++ +QP++ L+ ++ S + A +LYK H +N Sbjct: 61 FTILIRAVMIPLYNRQIKSSRELQELQPELRRLQGEYPGSENREALANAQQELYKEHGVN 120 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P A P+L+Q P+ A+Y ++ E+R + W+ DL DP Sbjct: 121 PYASFVPLLIQFPILMALYGALTRVPELR-EGTFLWV-DLGQKDPYF------------- 165 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWM-PVVFVFALSSFPAGLIIYW 542 I PI+ + F+ ++ A + +M ++N + PV + + +G+ +YW Sbjct: 166 ------ILPILAAAFTFLSTWLTNKAAKERSSMLLVMNILLPVFIFWFGTQISSGVALYW 219 Query: 543 SWSNVISIVQQAVIM 557 + SN +VQ V Sbjct: 220 AVSNAFQVVQILVFN 234 >gi|319946450|ref|ZP_08020687.1| SpoIIIJ family protein [Streptococcus australis ATCC 700641] gi|319747418|gb|EFV99674.1| SpoIIIJ family protein [Streptococcus australis ATCC 700641] Length = 312 Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 94/260 (36%), Gaps = 40/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF----PLAKKQYVSTANMKN 391 + W + + +L FG+ I+L TV V+++ F + K + M Sbjct: 36 FIWNLIGKPMGEAINFFATDLGLGFGLGIILVTVIVRVIIFPLGIYQSWKATYQSEKMNY 95 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 ++P ++E+ K + Q ++ K + ++P GC P+L+Q+P F A+Y Sbjct: 96 LKPIFAPIQERIKNAETQEEKLLANSELMNAQKENGVSPFGGIGCLPLLIQMPFFSALYF 155 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + P F + +++++ +IQ Sbjct: 156 AAQYT-------------------PGISKDSFLGIGLGSKSL----ALTLVVAVLYYIQS 192 Query: 506 KMSPPP-ADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D+ Q + P++ PAG+ +YW + I+QQ VI + Sbjct: 193 MLSLHGIEDENQRETMKKTALVSPIMIAVFSLMAPAGVTLYWVVGGFVQIIQQFVIN--Y 250 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 L ++ + N Sbjct: 251 LIRPRLRKQVAEEYKNNPPK 270 >gi|227510513|ref|ZP_03940562.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190165|gb|EEI70232.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 343 Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 103/255 (40%), Gaps = 40/255 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + ++A+P +M +VG++G AI++ TV V++ P+ +Q S+ + I Sbjct: 37 YDYLARPAQSIMEAIAQIVGSYGWAIVVLTVIVRMFLLPIMVRQMKSSTIQQERMQMIRP 96 Query: 399 LREKFKQS--------PPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVIS 448 K +Q +AM+ LY+ +NI+ GC P+++Q+P+F A+Y I Sbjct: 97 QMRKLQQRQKAAKTTEEQTAASQAMMALYRQNNISMTGGIGCLPLIIQMPIFTALYAAIR 156 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S E+ H T+F + ++ ++ LS +Q + Sbjct: 157 YSPELSH-------------------TVFMGIRLGQSSWL----LAVLSFLSYLLQGYLM 193 Query: 509 PPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 K Q ++ P++ + S PAGL IY+ + + +Q ++ Sbjct: 194 MLGTPKAQKKQMGAMMLMSPIMILLFTISAPAGLGIYFFIGGLFACLQTIIMN---LYRP 250 Query: 565 GLIDRLRSTFSKNYN 579 G+ ++ Sbjct: 251 GIRKKIAKEMEGKKP 265 >gi|323490539|ref|ZP_08095745.1| membrane protein oxaA [Planococcus donghaensis MPA1U2] gi|323395805|gb|EGA88645.1| membrane protein oxaA [Planococcus donghaensis MPA1U2] Length = 260 Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 36/241 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK------- 390 + F+ L G++G+AI++ T+ ++L+ P + Y MK Sbjct: 32 YTVFVKPFDVSLNYLGDLFGGSYGLAIVVITIIIRLVLMPFMLRTYKRQQGMKVKMDAMR 91 Query: 391 -NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVIS 448 ++ L+E + LQ+ M+ LYK H +NPL GC P+++Q+P+ +Y I Sbjct: 92 PEMEDIQKRLKETKDKEEQMKLQQEMMGLYKKHEVNPLNMGCLPVVIQMPIIMGLYFAIL 151 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S ++ A + W L + D I +I F Q K+S Sbjct: 152 HSPDV-QAHEFLWFS-LGSPD---------------------IIMTLIAGAVYFFQAKVS 188 Query: 509 PPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + Q + P++ +F + A L +YW+ ++ I+Q + K + Sbjct: 189 LWTMPEQQQKQMKLFIYISPIMIMFISFTSMAALPVYWTVGGILLIIQTFIGRKFYSNHP 248 Query: 565 G 565 Sbjct: 249 E 249 >gi|296395443|ref|YP_003660327.1| YidC/Oxa1 familymembrane protein insertase [Segniliparus rotundus DSM 44985] gi|296182590|gb|ADG99496.1| membrane protein insertase, YidC/Oxa1 family [Segniliparus rotundus DSM 44985] Length = 320 Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 113/299 (37%), Gaps = 58/299 (19%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F+ P+ ++ ++ + + ++++ ++ L + A +Q Sbjct: 1 MLDFVYYPVSGVLWVWHWVFSQVLGPKSGFAWALSVVALVCTIRALLYAPAVRQIRFMRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447 M+ +QP++ ++ K+ Q M +L + H NPL GC P+LLQIPVF +Y V+ Sbjct: 61 MQELQPQMKAIQAKY-GKDRQRQALEMQKLQQEHGFNPLLGCLPMLLQIPVFIGLYHVLS 119 Query: 448 ----------------------------------SISLEMR--HAPFWGWIKDLAAADPT 471 LE R P +I + AA+ Sbjct: 120 SFNRTAGAFFSGGGSLTPEQNRNTSNYVFSPADVQSFLESRFFGVPLSSYILEPAASFDA 179 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK--MSPPPAD---KGQAMILNWM--- 523 I + + II S++ + + +S PAD + QA ++ M Sbjct: 180 FIRAGSAVEFQRWQIALVAVPLMIIASVATHMNSRASLSRQPADVAEQPQAAMMRVMSLW 239 Query: 524 --PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 P+ + + P L++YW +N + QQ ++ + E +L++ + N+ Sbjct: 240 VFPLGVLIFGWASPIALLLYWVSNNAWTYGQQHLVFRKIDQEDE-EKKLQAIQRRAANA 297 >gi|195442310|ref|XP_002068901.1| GK18022 [Drosophila willistoni] gi|194164986|gb|EDW79887.1| GK18022 [Drosophila willistoni] Length = 469 Score = 104 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 85/215 (39%), Gaps = 38/215 (17%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PP 408 + AI + T+ V+ L FPL ++A M N P++ L+ K ++ Sbjct: 151 WDIPWWGAIAIGTLVVRTLIFPLVIVAQRNSAKMSNNMPQMQLLQLKMTEARQSGNAIES 210 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKD 464 + M+ + +NPL L Q P+F + ++ + +E W +D Sbjct: 211 ARYAQEMMLFMREKGVNPLKNMVVPLAQAPLFISFFMGLRQMANAPVESMRDGGLWWFQD 270 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQA 517 L ADP + P+I S ++++ ++S + Sbjct: 271 LTLADPFY-------------------LLPLITSATLYLTIEIGTDSARLSAANMNTM-K 310 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +L +P+V +FP+ ++ YW+ SN IS+ Q Sbjct: 311 YVLRALPLVIFPFTMNFPSAILTYWACSNFISLGQ 345 >gi|300791163|ref|YP_003771454.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei U32] gi|299800677|gb|ADJ51052.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei U32] Length = 384 Score = 104 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 105/261 (40%), Gaps = 43/261 (16%) Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ ++ + ++ + I+ T V+ + F Q S Sbjct: 1 MLDFIYYPVSFILWCWHKVFGFVFGEATAVSWILGIIFLTFTVRGIMFKPFVNQVRSMKK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M++ P++ ++++K+ Q M +L K H +NPL C P+LLQIPVF + V+ Sbjct: 61 MQDFAPEMKKIQKKYAN-DRQRQAAEMQKLQKEHGVNPLGSCLPMLLQIPVFIGLNHVLR 119 Query: 449 ISLEM-------RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG---------- 491 + M + ++ D+ + +F + Y + G Sbjct: 120 -AFTMPPPGGGPKTENYFFTQADVHSYVSAKLFGVNLGEAVYNGVGVVSGGAANVGFQWS 178 Query: 492 IWP------IIMSLSMFIQMK-----MSPPPADKGQAMI----LNWMPVVFVFALSSFPA 536 + P I+ S++ + + + A A++ + P+ + + FP Sbjct: 179 VLPVALPLMIVASIATHLTARHSVARQNAASATPQTAIMNKLTMYIFPLGVLVFGALFPL 238 Query: 537 GLIIYWSWSNVISIVQQAVIM 557 GL+ YW +N +++QQ ++ Sbjct: 239 GLLFYWLANNGWTLMQQRLVY 259 >gi|283457086|ref|YP_003361650.1| YidC Inner membrane protein (Preprotein translocase subunit YidC) [Bifidobacterium dentium Bd1] gi|283103720|gb|ADB10826.1| YidC Inner membrane protein (Preprotein translocase subunit YidC) [Bifidobacterium dentium Bd1] Length = 309 Score = 104 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 102/223 (45%), Gaps = 22/223 (9%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + + ++ ++I+ + V FPL K S M+ IQPK+ ++ K+K Q Sbjct: 14 LLGMHPVGFSWVLSIIFLVLVVHACVFPLYYKTMKSMRKMQEIQPKMARIQNKYKGKNDQ 73 Query: 410 V----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM-RHAPFWGWIKD 464 +Q+ M++LY+ ++ NP+ C P+L+Q P+F ++ +S + R D Sbjct: 74 ASKEAMQREMMKLYQDNDANPMGSCLPMLIQGPIFMCMFYTLSAIPYIARGKRAALGAFD 133 Query: 465 LAAADPTNIFTLFGILPFY------LPGFMHVGIWPIIMSLSMFIQM----KMSPPPADK 514 A A T+F + G + + I+ +M ++ K + P Sbjct: 134 QATALQFTKTTVFNTNVTDNFMTANIGGKVVIAIFVALMCFCLWFMQYNNMKRNMPQNGP 193 Query: 515 ------GQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ WM P++++F+ ++ P +++YW +N++++ Sbjct: 194 QTKQTEMMQKMMLWMFPIMYIFSGATMPFAVLVYWLANNILNL 236 >gi|313884144|ref|ZP_07817910.1| membrane protein insertase, YidC/Oxa1 family [Eremococcus coleocola ACS-139-V-Col8] gi|312620591|gb|EFR32014.1| membrane protein insertase, YidC/Oxa1 family [Eremococcus coleocola ACS-139-V-Col8] Length = 314 Score = 104 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 91/256 (35%), Gaps = 36/256 (14%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE- 398 Y L + G++GIAI++ T+ ++ P K + Sbjct: 40 YIGIPTSHFLDWLAHIFGGSYGIAIIIVTLITRIFMIPSTLKMTKGSMTSAAKMKVAQPE 99 Query: 399 -------LREKFKQSPPQVLQKAMIQLYKTHNINPL---AGCWPILLQIPVFFAIYKVIS 448 + LQ+ ++ +YK ++IN L +GC P+L+Q+P+ A+Y I Sbjct: 100 INEIQAEIEAATSDQEKMQLQQELMTVYKKYDINMLGGVSGCLPLLIQMPIISAVYAAIR 159 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S ++++ F + V II + ++ K Sbjct: 160 SSEAIKNSH-------------------FLGINLGERSLGIVIAVVIIGFIQGWLSTKAM 200 Query: 509 PPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P + ++ P++ + AGL IY+ ++ SI QQ + H + Sbjct: 201 PASDNPQAQQTSKSMMLINPLMIGYITYISAAGLGIYFLVGSIFSIFQQLYMN--HVVKP 258 Query: 565 GLIDRLRSTFSKNYNS 580 + + + + N+ Sbjct: 259 KVQAEIDAHAERFKNA 274 >gi|118620076|ref|YP_908408.1| putative inner membrane protein translocase component YidC [Mycobacterium ulcerans Agy99] gi|118572186|gb|ABL06937.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99] Length = 371 Score = 104 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 100/265 (37%), Gaps = 39/265 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E + + + + + +++M ++ L + +Q +T M Sbjct: 10 LEFVYYPVSWIMWVWYKLFALVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 69 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L++K+ Q + M +L + H NP+ GC P+L QIPVF +Y V+ Sbjct: 70 QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 128 Query: 450 S--------------LEMRHAPFWGWIK-DLAAADPTNIFT------------LFGILPF 482 +E R + + D+ N+F L + F Sbjct: 129 FNRTTGGFGQPHLSVVENRLTGNYVFTPTDVGHFLDVNLFGAPIGASMTQRGGLDAFVDF 188 Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWMPVVFVFAL 531 P + VG+ ++ ++ + + SP A Q ++ P+ V Sbjct: 189 SRPAVIAVGVPVMVLAGVATYFNSRASVARQSPEAAANPQTAMMNKLALYVFPLGVVVGG 248 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 P +I+YW +N+ + QQ + Sbjct: 249 PFLPLAIILYWFSNNIWTFGQQHYV 273 >gi|46190726|ref|ZP_00121168.2| COG0706: Preprotein translocase subunit YidC [Bifidobacterium longum DJO10A] gi|322692115|ref|YP_004221685.1| hypothetical protein BLLJ_1929 [Bifidobacterium longum subsp. longum JCM 1217] gi|320456971|dbj|BAJ67593.1| conserved hypothetical protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 305 Score = 104 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 103/231 (44%), Gaps = 22/231 (9%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 F +M + ++ +AI++ + V+ FPL KQ S M+ + PK+ ++ K+K Sbjct: 7 FFVMLGVSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKMQALAPKMQRIQNKYKGK 66 Query: 407 PPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR-HAPFWGW 461 Q ++ ++LY+ +++NP C P+L+Q PVF +++ +S + Sbjct: 67 TDQASREAMSRETMKLYQDNDVNPAGSCLPMLIQGPVFMSMFYTLSAIPYIANGKRDALG 126 Query: 462 IKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIMSLSMFIQM----KMSPP 510 D+A A +FGI+ G +GI+ +M ++ K + Sbjct: 127 AFDVATAKQFTQTDVFGIVSVTDNFTSAAASGKAVIGIFVFLMCFCLWFMQYFSMKRNMA 186 Query: 511 PADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 A Q +L PV+++F+ + P +++YW +NV ++ + Sbjct: 187 AASMNKQTETMQKAMLWLFPVMYIFSGVAMPFAVLVYWLTNNVCNLCRTLW 237 >gi|195326627|ref|XP_002030027.1| GM24796 [Drosophila sechellia] gi|194118970|gb|EDW41013.1| GM24796 [Drosophila sechellia] Length = 441 Score = 104 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 87/232 (37%), Gaps = 39/232 (16%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + M + + I + T+ V+ + FPL ++A M N P++ Sbjct: 131 WSPVGMVQNCMEFLHCTWEIPWWGTIAIGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQM 190 Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVI 447 L+ K ++ + M+ + +NPL L Q P+F + ++ Sbjct: 191 LQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKNMVVPLAQAPLFISFFMGLRQMA 250 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504 + +E W DL ADP + P+I S ++++ Sbjct: 251 NAPVESMRDGGLFWFTDLTMADPYY-------------------LLPLITSATLYLTIEI 291 Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++S + +L +P+V +FPA ++ YW+ SN IS+ Q Sbjct: 292 GTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQ 342 >gi|71013508|ref|XP_758604.1| hypothetical protein UM02457.1 [Ustilago maydis 521] gi|46098262|gb|EAK83495.1| hypothetical protein UM02457.1 [Ustilago maydis 521] Length = 550 Score = 104 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 89/241 (36%), Gaps = 36/241 (14%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS--- 385 + +I + + + I +TTV ++LL P++ + Sbjct: 209 ELGLNHWVTPPGWITNLLEFV---GTTTGLPWWGTITITTVALRLLIAPISIAGQKNAIR 265 Query: 386 ----TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 MK I + Q Q A +L + +N NP+ PIL Q P+ F Sbjct: 266 LGNIQPEMKRNMDDIKHYKAAGDQMQMQKAVMATQKLLRDNNANPIKSLVPILFQFPLMF 325 Query: 442 AIYKVI-----SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 + + + S S H + W DL DPT I L + + + Sbjct: 326 SYFLALERIAKSGSESFAHGGPF-WTTDLTVPDPTWILPAISTLATFAVAEVGFKVG--- 381 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNW-----MPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + +D Q+ ++ + MP+ + ++FP+G+++YW+ +N+ S+ Sbjct: 382 -----------TNSQSDPAQSQMMKYIFRGFMPI-LAWFSTTFPSGVLVYWATTNLYSLA 429 Query: 552 Q 552 Q Sbjct: 430 Q 430 >gi|171741737|ref|ZP_02917544.1| hypothetical protein BIFDEN_00828 [Bifidobacterium dentium ATCC 27678] gi|171277351|gb|EDT45012.1| hypothetical protein BIFDEN_00828 [Bifidobacterium dentium ATCC 27678] Length = 336 Score = 104 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 107/260 (41%), Gaps = 22/260 (8%) Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 + + + F+ + + + ++ ++I+ + V Sbjct: 4 QNQFLLDSGFWGWLYKLLTPIEWLMTQIMAIFHKFLTLLGMHPVGFSWVLSIIFLVLVVH 63 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLA 428 FPL K S M+ IQPK+ ++ K+K Q +Q+ M++LY+ ++ NP+ Sbjct: 64 ACVFPLYYKTMKSMRKMQEIQPKMARIQNKYKGKNDQASKEAMQREMMKLYQDNDANPMG 123 Query: 429 GCWPILLQIPVFFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGILPFY---- 483 C P+L+Q P+F ++ +S + R D A A T+F Sbjct: 124 SCLPMLIQGPIFMCMFYTLSAIPYIARGKRAALGAFDQATALQFTKTTVFNTNVTDNFMT 183 Query: 484 --LPGFMHVGIWPIIMSLSMFIQM----KMSPPPADK------GQAMILNWM-PVVFVFA 530 + G + + I+ +M ++ K + P ++ WM P++++F+ Sbjct: 184 ANIGGKVVIAIFVALMCFCLWFMQYNNMKRNMPQNGPQTKQTEMMQKMMLWMFPIMYIFS 243 Query: 531 LSSFPAGLIIYWSWSNVISI 550 ++ P +++YW +N++++ Sbjct: 244 GATMPFAVLVYWLANNILNL 263 >gi|283797193|ref|ZP_06346346.1| SpoJ protein [Clostridium sp. M62/1] gi|291075151|gb|EFE12515.1| SpoJ protein [Clostridium sp. M62/1] Length = 414 Score = 104 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 109/305 (35%), Gaps = 81/305 (26%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412 V N G+ I+L T+ +LL FPL KQ S+ M + P+I +++K+K Q Q Sbjct: 36 VFNIGVCIILFTIITRLLLFPLTLKQQKSSKMMALMNPEIAAIQKKYKGKTDQTSMAKQQ 95 Query: 413 KAMIQLYKTHNINPLAGCWPILLQI-------------PVFFAIYKVISISLE--MRHAP 457 M +Y+ + +P AGC P+L+Q P + +V ++ +++ P Sbjct: 96 VEMKAVYEKYGSSPTAGCLPLLIQFPIILALYRVIYNIPAYVPSVRVFFENVVEPLQNQP 155 Query: 458 FW------------------------------------GW---------IKDLAAA--DP 470 + W I D+ A D Sbjct: 156 DFASKLIEVGGKMSNGFTAEALANPNKVIDLLYKFTPDNWKGLENAFPSIADVIAQNADK 215 Query: 471 TNIFTLFGILPFYLPGFMHVG------IWPIIMSLSMFIQMKMSP--------PPADKGQ 516 F + F I PI+ ++ ++ K+ P + Sbjct: 216 IEQMNSFLGINLATAPFTGFSNITVAWIIPILAGITQWLSTKLMSTNQTMDKDAPGAQMM 275 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 ++ MP++ VF + PAG+ IYW +I I QQ + ++ + + +R K Sbjct: 276 NSMMITMPLMSVFFCFTLPAGIGIYWVVQGIILIFQQMFVNSYMK-KVDMDELIRKNVEK 334 Query: 577 NYNSQ 581 + Sbjct: 335 MNKKR 339 >gi|228474911|ref|ZP_04059640.1| putative membrane protein [Staphylococcus hominis SK119] gi|228271143|gb|EEK12523.1| putative membrane protein [Staphylococcus hominis SK119] Length = 289 Score = 104 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 105/265 (39%), Gaps = 43/265 (16%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 ++ +PM ++ + + ++GIAI++ + ++++ P Y ++ M+ Sbjct: 32 FYNTFVEPMAKILHWLGHSVFHDDYGIAIIVLVLVIRIILLPFMLSNYKNSHMMREKMKI 91 Query: 396 --------IDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + M+++YK ++INP+ GC P+L+Q+P+ +Y Sbjct: 92 AKPEVEGVQEKVKRARTQEEKMAANQEMMEVYKKYDINPMKSALGCLPVLIQMPIVMGLY 151 Query: 445 KVISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ + + P + W +L D II + F Sbjct: 152 FVLRYRIGGGITEHPHFLWF-NLVHPDIW---------------------ITIIAGVLYF 189 Query: 503 IQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 IQ +S + Q + M P++ ++ S + L +YWS I+Q K Sbjct: 190 IQAWVSSKQMPEEQRQMTYMMMIVSPIMIIWISLSSASALGLYWSVGAAFLIIQTFFANK 249 Query: 559 MHG--AEIGLIDRLRSTFSKNYNSQ 581 + A+ + + + N N + Sbjct: 250 HYEKVAKQEIGPMVEAHKENNSNKK 274 >gi|294781807|ref|ZP_06747140.1| stage III sporulation protein J [Fusobacterium sp. 1_1_41FAA] gi|294481917|gb|EFG29685.1| stage III sporulation protein J [Fusobacterium sp. 1_1_41FAA] Length = 206 Score = 104 bits (258), Expect = 6e-20, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 23/208 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 VGNFG++I++ T+ +K+ PL KQ ST MK +QP+I++L+EK+ Q+L Sbjct: 19 TDKYVGNFGVSIIIVTILIKIALLPLTLKQDKSTKEMKKLQPEIEKLKEKYANDK-QMLN 77 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 ++LYK H +NPL GC P+LLQ+P+ FA++ V+ + + + W+K L DP Sbjct: 78 IKTMELYKEHKVNPLGGCLPLLLQLPILFALFGVLRSGI-IPADSSFLWLK-LPEPDPFF 135 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-ILNWMPVVFVFAL 531 I P++ F Q K+ Q ++ P++ +F Sbjct: 136 -------------------ILPVLNGAVSFFQQKLMGSADSNPQMKNMMYIFPIMMIFIS 176 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKM 559 P+GL +YW S+V+++VQQ IMK Sbjct: 177 YRMPSGLQLYWLTSSVLAVVQQYFIMKK 204 >gi|306823999|ref|ZP_07457373.1| membrane protein OxaA [Bifidobacterium dentium ATCC 27679] gi|309801939|ref|ZP_07696053.1| membrane protein insertase, YidC/Oxa1 family [Bifidobacterium dentium JCVIHMP022] gi|304552997|gb|EFM40910.1| membrane protein OxaA [Bifidobacterium dentium ATCC 27679] gi|308221387|gb|EFO77685.1| membrane protein insertase, YidC/Oxa1 family [Bifidobacterium dentium JCVIHMP022] Length = 336 Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 107/260 (41%), Gaps = 22/260 (8%) Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 + + + F+ + + + ++ ++I+ + V Sbjct: 4 QNQFLLDSGFWGWLYKLLTPIEWLMTQIMAIFHKFLTLLGMHPVGFSWVLSIIFLVLVVH 63 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLA 428 FPL K S M+ IQPK+ ++ K+K Q +Q+ M++LY+ ++ NP+ Sbjct: 64 ACVFPLYYKTMKSMRKMQEIQPKMARIQNKYKGKNDQASKEAMQREMMKLYQDNDANPMG 123 Query: 429 GCWPILLQIPVFFAIYKVISISLEM-RHAPFWGWIKDLAAADPTNIFTLFGILPFY---- 483 C P+L+Q P+F ++ +S + R D A A T+F Sbjct: 124 SCLPMLIQGPIFMCMFYTLSAIPYIARGKRAALGAFDQATALQFTKTTVFNTNVTDNFMT 183 Query: 484 --LPGFMHVGIWPIIMSLSMFIQM----KMSPPPADK------GQAMILNWM-PVVFVFA 530 + G + + I+ +M ++ K + P ++ WM P++++F+ Sbjct: 184 ANIGGKVVIAIFVALMCFCLWFMQYNNMKRNMPQNGPQTKQTEMMQKMMLWMFPIMYIFS 243 Query: 531 LSSFPAGLIIYWSWSNVISI 550 ++ P +++YW +N++++ Sbjct: 244 GATMPFAVLVYWLANNILNL 263 >gi|322515972|ref|ZP_08068912.1| SpoIIIJ family protein [Streptococcus vestibularis ATCC 49124] gi|322125571|gb|EFX96906.1| SpoIIIJ family protein [Streptococcus vestibularis ATCC 49124] Length = 284 Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 27/202 (13%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-A 414 G+ G+ I++ T+ ++ + PL +Q S+ ++ +QP++ L+ ++ + A Sbjct: 66 FGGSIGLGIIIFTILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYA 125 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LYK H +NP A P+++Q P+ A+Y ++ E+R + W+ DL DP Sbjct: 126 QQELYKEHGVNPYASLLPLIIQFPILMALYGALTRVPELR-EGTFLWV-DLGQKDPYF-- 181 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 I PI+ + F+ ++ A A +L M ++ + F Sbjct: 182 -----------------ILPILAAAFTFLSTWLTNKAAKDRSA-MLLVMNIMLSIFIFWF 223 Query: 535 ----PAGLIIYWSWSNVISIVQ 552 +G+ +YW+ SN +VQ Sbjct: 224 GTQISSGVALYWAVSNAFQVVQ 245 >gi|300120462|emb|CBK20016.2| Oxa1 [Blastocystis hominis] Length = 441 Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 97/250 (38%), Gaps = 33/250 (13%) Query: 321 YEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 Y L + + + L+++ ++ + AI T+ ++L+ PL Sbjct: 110 YMTGLNDAALKYGLFGVTIGTPTTWVVSLLTWVNSMGIPWWGAIAGVTLGLRLVLLPLTI 169 Query: 381 KQYVSTANMKNIQPKIDELREKF-------KQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 K A + IQP++++L E+ + Q ++ M+ LYK ++P + + Sbjct: 170 KSTRQRAKLAEIQPELNKLLERARLSQSMGMAADAQGMRDEMLSLYKNAGVSPFSPLFGA 229 Query: 434 LLQIPVFFAIYKVIS---ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 +QIPV + + + ++ W +LAAADP Sbjct: 230 FIQIPVVISCFMGVRKLCETVPAVTTGGLSWFTNLAAADPYF------------------ 271 Query: 491 GIWPIIMSLSMFIQMKMSPPPADKG----QAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 + P++ LS ++ + ++ M + VF + PAGL YW+ ++ Sbjct: 272 -VLPVVTGLSTLFMTELGADGMNGNGQVGMKYMMRGMSLFMVFIAAKLPAGLCFYWTVNS 330 Query: 547 VISIVQQAVI 556 +++ Q I Sbjct: 331 ILACCQTLAI 340 >gi|254777659|ref|ZP_05219175.1| putative inner membrane protein translocase component YidC [Mycobacterium avium subsp. avium ATCC 25291] Length = 353 Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 109/288 (37%), Gaps = 50/288 (17%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAK 380 ++L D+ F+ P+ +M +Y L + +++M ++ L + Sbjct: 1 MDLLFDFFSLDFVYYPVSWIMWVWYKLFAAMLGPSNFFAWALSVMFLVFTLRALLYKPFV 60 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 +Q +T M+ +QP+I L++K+ Q + M +L + H NP+ GC P+L QIPVF Sbjct: 61 RQIRTTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVF 119 Query: 441 FAIYKVISI---SLEMRHAPFWGWIKD---------------------LAAADPTNIFTL 476 +Y V+ + P +++ A + Sbjct: 120 LGLYHVLRSFNRTTGGFGQPHLSVVQNRLTGNYVFTPTDVGHFLDANLFGAPIGAFMTQR 179 Query: 477 FGILPFYL---PGFMHVGIWP--IIMSLSMFIQMK-----MSPPPADKGQAMIL-----N 521 G+ F P + VG P I+ ++ + + SP A Q ++ Sbjct: 180 TGLDAFTYFSRPAVIAVG-LPVMILAGVATYFNSRASVARQSPEAAANPQTAMMNKLALY 238 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P+ V P +I+YW +N+ + QQ + M E + Sbjct: 239 VFPLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQ 286 >gi|41410445|ref|NP_963281.1| putative inner membrane protein translocase component YidC [Mycobacterium avium subsp. paratuberculosis K-10] gi|38503196|sp|Q9L7M1|OXAA_MYCPA RecName: Full=Membrane protein oxaA gi|6969277|gb|AAF33698.1| unknown [Mycobacterium avium subsp. paratuberculosis] gi|41399279|gb|AAS06897.1| hypothetical protein MAP_4347c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 353 Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 109/288 (37%), Gaps = 50/288 (17%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAK 380 ++L D+ F+ P+ +M +Y L + +++M ++ L + Sbjct: 1 MDLLFDFFSLDFVYYPVSWIMWVWYKLFAAMLGPSNFFAWALSVMFLVFTLRALLYKPFV 60 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 +Q +T M+ +QP+I L++K+ Q + M +L + H NP+ GC P+L QIPVF Sbjct: 61 RQIRTTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVF 119 Query: 441 FAIYKVISI---SLEMRHAPFWGWIKD---------------------LAAADPTNIFTL 476 +Y V+ + P +++ A + Sbjct: 120 LGLYHVLRSFNRTTGGFGQPHLSVVQNRLTGNYVFTPTDVGHFLDANLFGAPIGAFMTQR 179 Query: 477 FGILPFYL---PGFMHVGIWP--IIMSLSMFIQMK-----MSPPPADKGQAMIL-----N 521 G+ F P + VG P I+ ++ + + SP A Q ++ Sbjct: 180 TGLDAFTYFSRPAVIAVG-LPVMILAGVATYFNSRASVARQSPEAAANPQTAMMNKLALY 238 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P+ V P +I+YW +N+ + QQ + M E + Sbjct: 239 VFPLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQ 286 >gi|253752397|ref|YP_003025538.1| membrane protein OxaA 2 precursor [Streptococcus suis SC84] gi|253754223|ref|YP_003027364.1| membrane protein OxaA 2 precursor [Streptococcus suis P1/7] gi|253756157|ref|YP_003029297.1| membrane protein OxaA 2 precursor [Streptococcus suis BM407] gi|251816686|emb|CAZ52327.1| membrane protein OxaA 2 precursor [Streptococcus suis SC84] gi|251818621|emb|CAZ56455.1| membrane protein OxaA 2 precursor [Streptococcus suis BM407] gi|251820469|emb|CAR47193.1| membrane protein OxaA 2 precursor [Streptococcus suis P1/7] Length = 304 Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 99/253 (39%), Gaps = 40/253 (15%) Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKNIQ 393 + ++ +PM L+ +F + FG+AI++ T+ V+ + + K + + M ++ Sbjct: 37 WDWLGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYLK 96 Query: 394 PKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 P + ++E+ K + Q Q + K + ++ L GC P+L+Q+P F AIY Sbjct: 97 PILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIY--- 153 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 RH P L + I ++ + + Q + Sbjct: 154 ---FAARHTPGISEATFLG-----------------INLGSTSLILTVVAGILYYAQSLL 193 Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D+ Q + M P++ + PAG+ +YW + I+QQA+ + Sbjct: 194 MQVGMDEEQKKQMKTMALMNPIMIMMFSFGSPAGVTLYWVVGGLFGILQQAITN--FILK 251 Query: 564 IGLIDRLRSTFSK 576 + ++ F Sbjct: 252 PRIRKQVEEEFKN 264 >gi|257869607|ref|ZP_05649260.1| inner membrane protein [Enterococcus gallinarum EG2] gi|257803771|gb|EEV32593.1| inner membrane protein [Enterococcus gallinarum EG2] Length = 306 Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 98/261 (37%), Gaps = 39/261 (14%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + + + ++ N ++G AI+ T+ V+L+ PL Q T Sbjct: 32 NGMIYRFLVKPLGNLITMLVENFDWSYGWAIIAVTIVVRLIILPLGIHQSKKTMIQSEKM 91 Query: 394 P--------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAI 443 L++ + Q M ++Y +N++ GC P+L+Q+P+F A+ Sbjct: 92 QFLKPQVDIAQANLKKATTREEQMQAQADMQKIYSENNVSMFGGIGCLPLLIQMPIFSAL 151 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y + ++++ F+G + P F+ V I +S I Sbjct: 152 YFTARYTQGIQNSEFFG-------------------ISLGQPSFLFVAI----AGISYLI 188 Query: 504 QMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q +S + Q + M P++ VF S PAG+ +YW V S +Q + + Sbjct: 189 QGYISTIGIPEEQKKTMKTMLIVSPLMIVFMSLSAPAGVTLYWVVGGVFSCLQTFITNVI 248 Query: 560 HGAEIGLIDRLRSTFSKNYNS 580 + + ++ + N Sbjct: 249 M--KPKIRAQVEAEMKANPPK 267 >gi|226309516|ref|YP_002769478.1| OxaA family protein [Rhodococcus erythropolis PR4] gi|226188635|dbj|BAH36739.1| putative OxaA family protein [Rhodococcus erythropolis PR4] Length = 368 Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 106/297 (35%), Gaps = 56/297 (18%) Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ ++ + + ++++ ++ + + KQ +T Sbjct: 1 MLNFIYYPVSAILWVWHKVFGFILGPDNGIAWALSVVFLVFTLRAVLYKPFVKQVRTTRQ 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP+I L++K+ Q M +L K H NP+ GC P+L Q PVF ++ V+ Sbjct: 61 MQELQPQIKALQKKYSG-DRQRQAVEMQKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVLR 119 Query: 449 I-------------SLE----------------------MRHAPFWGWIKDLAAADPTNI 473 S E + AP I A + Sbjct: 120 SFNRTGTGMGQLGMSAEDNLNTPNYVFSATDVQSFLDARLFGAPISAAITTPVAQLQAYV 179 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWM 523 LP L + II S++ + S A Q+ I+ Sbjct: 180 TENVPELPSRLNIILVAAPLMIIASIATHFNSRASVARQSEAAAANPQSAIMNKLALYVF 239 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 P+ + P +++YW +N+ + QQ ++ + AE + + +N N+ Sbjct: 240 PLGVLVGGPFLPIAILLYWVSNNIWTYGQQHLVFRKIDAEEEAKKQ-EAITRRNDNA 295 >gi|319758802|gb|ADV70744.1| preprotein translocase subunit YidC [Streptococcus suis JS14] Length = 326 Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 99/253 (39%), Gaps = 40/253 (15%) Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKNIQ 393 + ++ +PM L+ +F + FG+AI++ T+ V+ + + K + + M ++ Sbjct: 59 WDWLGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYLK 118 Query: 394 PKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 P + ++E+ K + Q Q + K + ++ L GC P+L+Q+P F AIY Sbjct: 119 PILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFAA 178 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 RH P L + I ++ + + Q + Sbjct: 179 ------RHTPGISEATFLG-----------------INLGSTSLILTVVAGILYYAQSLL 215 Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D+ Q + M P++ + PAG+ +YW + I+QQA+ + Sbjct: 216 MQVGMDEEQKKQMKTMALMNPIMIMMFSFGSPAGVTLYWVVGGLFGILQQAITN--FILK 273 Query: 564 IGLIDRLRSTFSK 576 + ++ F Sbjct: 274 PRIRKQVEEEFKN 286 >gi|23465227|ref|NP_695830.1| hypothetical protein BL0644 [Bifidobacterium longum NCC2705] gi|189440301|ref|YP_001955382.1| preprotein translocase subunit [Bifidobacterium longum DJO10A] gi|239622847|ref|ZP_04665878.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|317482355|ref|ZP_07941375.1| YidC/Oxa1 family membrane protein insertase [Bifidobacterium sp. 12_1_47BFAA] gi|38503029|sp|Q8G6J6|OXAA_BIFLO RecName: Full=Membrane protein oxaA gi|23325856|gb|AAN24466.1| conserved hypothetical transmembrane protein in the 60 kDa inner membrane protein family [Bifidobacterium longum NCC2705] gi|189428736|gb|ACD98884.1| Preprotein translocase subunit [Bifidobacterium longum DJO10A] gi|239514844|gb|EEQ54711.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|316916235|gb|EFV37637.1| YidC/Oxa1 family membrane protein insertase [Bifidobacterium sp. 12_1_47BFAA] Length = 335 Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 22/248 (8%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + F +M + ++ +AI++ + V+ FPL KQ S M Sbjct: 20 LTPVEWLQTWIMKIVHDFFVMLGVSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKM 79 Query: 390 KNIQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + + PK+ ++ K+K Q ++ ++LY+ +++NP C P+L+Q PVF +++ Sbjct: 80 QALAPKMQRIQNKYKGKTDQASREAMSRETMKLYQDNDVNPAGSCLPMLIQGPVFMSMFY 139 Query: 446 VISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIM 497 +S + D+A A +FGI+ G +GI+ +M Sbjct: 140 TLSAIPYIANGKRDALGAFDVATAKQFTQTDVFGIVSVTDNFTSAAASGKAVIGIFVFLM 199 Query: 498 SLSMFIQM----KMSPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 ++ K + A Q +L PV+++F+ + P +++YW +NV Sbjct: 200 CFCLWFMQYFSMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGVAMPFAVLVYWLTNNV 259 Query: 548 ISIVQQAV 555 ++ + Sbjct: 260 CNLCRTLW 267 >gi|195069813|ref|XP_001997036.1| GH23226 [Drosophila grimshawi] gi|193906228|gb|EDW05095.1| GH23226 [Drosophila grimshawi] Length = 449 Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 87/232 (37%), Gaps = 39/232 (16%) Query: 340 YFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + M + + + I + T+ V+ L FPL ++A M N P++ Sbjct: 137 WSPVGMVQQCMEFLHCTWDIPWWGTIAIGTICVRTLIFPLVILAQRNSARMSNNMPQMQV 196 Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIYKVI 447 L+ K ++ + M+ + +NPL L Q P F + ++ Sbjct: 197 LQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKNMIVPLAQAPLFLSFFMGLRQMA 256 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504 + +E W DL ADP + P+I S ++++ Sbjct: 257 NTPVESMRDGGLFWFTDLTMADPFY-------------------LLPVITSATLYLTIEL 297 Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++S + +L +P+V +FPA ++ YW+ SN IS+ Q Sbjct: 298 GTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQ 348 >gi|194868587|ref|XP_001972309.1| GG13956 [Drosophila erecta] gi|190654092|gb|EDV51335.1| GG13956 [Drosophila erecta] Length = 441 Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 88/232 (37%), Gaps = 39/232 (16%) Query: 340 YFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + + + I + T+ V+ + FPL ++A M N P++ Sbjct: 131 WSPVGMVQNCLEFLHCTWDIPWWGTIAIGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQM 190 Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVI 447 L+ K ++ + M+ + +NPL L Q P+F + ++ Sbjct: 191 LQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKNMVVPLAQAPLFISFFMGLRQMA 250 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504 + +E W DL ADP + P+I S ++++ Sbjct: 251 NAPVESMRDGGLFWFTDLTLADPFY-------------------LLPLITSATLYLTIEI 291 Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++S + +L +P+V +FPA ++ YW+ SN IS+ Q Sbjct: 292 GTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQ 342 >gi|146319369|ref|YP_001199081.1| preprotein translocase subunit YidC [Streptococcus suis 05ZYH33] gi|145690175|gb|ABP90681.1| Preprotein translocase subunit YidC [Streptococcus suis 05ZYH33] Length = 326 Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 99/253 (39%), Gaps = 40/253 (15%) Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKNIQ 393 + ++ +PM L+ +F + FG+AI++ T+ V+ + + K + + M ++ Sbjct: 59 WDWLGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYLK 118 Query: 394 PKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 P + ++E+ K + Q Q + K + ++ L GC P+L+Q+P F AIY Sbjct: 119 PILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFAA 178 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 RH P L + I ++ + + Q + Sbjct: 179 ------RHTPGISEATFLG-----------------INLGSTSLILTVVAGILYYAQSLL 215 Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D+ Q + M P++ + PAG+ +YW + I+QQA+ + Sbjct: 216 MQVGMDEEQKKQMKTMALMNPIMIMMFSFGSPAGVTLYWVVGGLFGILQQAITN--FILK 273 Query: 564 IGLIDRLRSTFSK 576 + ++ F Sbjct: 274 PRIRKQVEEEFKN 286 >gi|195021527|ref|XP_001985412.1| GH17044 [Drosophila grimshawi] gi|193898894|gb|EDV97760.1| GH17044 [Drosophila grimshawi] Length = 457 Score = 103 bits (256), Expect = 8e-20, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 87/232 (37%), Gaps = 39/232 (16%) Query: 340 YFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + M + + + I + T+ V+ L FPL ++A M N P++ Sbjct: 137 WSPVGMVQQCMEFLHCTWDIPWWGTIAIGTICVRTLIFPLVILAQRNSARMSNNMPQMQV 196 Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIYKVI 447 L+ K ++ + M+ + +NPL L Q P F + ++ Sbjct: 197 LQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKNMIVPLAQAPLFLSFFMGLRQMA 256 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504 + +E W DL ADP + P+I S ++++ Sbjct: 257 NTPVESMRDGGLFWFTDLTMADPFY-------------------LLPVITSATLYLTIEL 297 Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++S + +L +P+V +FPA ++ YW+ SN IS+ Q Sbjct: 298 GTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQ 348 >gi|182416735|ref|ZP_02948134.1| membrane protein OxaA [Clostridium butyricum 5521] gi|237669614|ref|ZP_04529592.1| 60 kDa inner membrane insertion protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379392|gb|EDT76887.1| membrane protein OxaA [Clostridium butyricum 5521] gi|237654848|gb|EEP52410.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium butyricum E4 str. BoNT E BL5262] Length = 258 Score = 103 bits (256), Expect = 8e-20, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 18/231 (7%) Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 +L ++ +AI+ TV V+LL P K ST M+ IQP+I ++++K+ +S PQ Sbjct: 23 MGVTDLGLSYVLAILAFTVAVRLLILPFNIKAAKSTRGMQKIQPEIKKIQDKY-KSDPQK 81 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAAD 469 + +++LYK +N++ + GC P LL +P+ A+Y V +L + WIKD+ A D Sbjct: 82 MNTEVMKLYKDNNVSMVGGCLPTLLPLPILMALYWVFMGINLPEGQVASFLWIKDVFAPD 141 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV-VFV 528 P I + L YLP ++ K +P +N M + Sbjct: 142 PYYILAIVAALSTYLPS---------------YLMTKATPQQPGGMSMGTMNLMMAGMMG 186 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 F +F A L++YW N+I VQ + + + + Sbjct: 187 FMSLNFKAILVLYWIMGNLIQAVQTYFLNYRPAVKDKIKQETAVNRQEENK 237 >gi|15611057|ref|NP_218438.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis H37Rv] gi|15843555|ref|NP_338592.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis CDC1551] gi|31795094|ref|NP_857587.1| putative inner membrane protein translocase component YidC [Mycobacterium bovis AF2122/97] gi|148663788|ref|YP_001285311.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis H37Ra] gi|148825129|ref|YP_001289883.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis F11] gi|167969459|ref|ZP_02551736.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis H37Ra] gi|215405979|ref|ZP_03418160.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis 02_1987] gi|215413849|ref|ZP_03422514.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis 94_M4241A] gi|215425183|ref|ZP_03423102.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis T92] gi|215432902|ref|ZP_03430821.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis EAS054] gi|215448268|ref|ZP_03435020.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis T85] gi|219555768|ref|ZP_03534844.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis T17] gi|254233403|ref|ZP_04926729.1| hypothetical protein TBCG_03848 [Mycobacterium tuberculosis C] gi|254366457|ref|ZP_04982501.1| conserved transmembrane protein [Mycobacterium tuberculosis str. Haarlem] gi|254548925|ref|ZP_05139372.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260184850|ref|ZP_05762324.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis CPHL_A] gi|260198981|ref|ZP_05766472.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis T46] gi|260203134|ref|ZP_05770625.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis K85] gi|289441364|ref|ZP_06431108.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289445522|ref|ZP_06435266.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289556189|ref|ZP_06445399.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289567878|ref|ZP_06448105.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289572573|ref|ZP_06452800.1| membrane protein oxaA [Mycobacterium tuberculosis K85] gi|289747765|ref|ZP_06507143.1| conserved transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289748459|ref|ZP_06507837.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289756056|ref|ZP_06515434.1| membrane protein oxaA [Mycobacterium tuberculosis EAS054] gi|289760094|ref|ZP_06519472.1| membrane protein oxaA [Mycobacterium tuberculosis T85] gi|289764112|ref|ZP_06523490.1| conserved transmembrane protein [Mycobacterium tuberculosis GM 1503] gi|294995603|ref|ZP_06801294.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis 210] gi|297733603|ref|ZP_06962721.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis KZN R506] gi|298527393|ref|ZP_07014802.1| membrane protein oxaA [Mycobacterium tuberculosis 94_M4241A] gi|306778285|ref|ZP_07416622.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|306778815|ref|ZP_07417152.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|306786842|ref|ZP_07425164.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|306795591|ref|ZP_07433893.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|306801566|ref|ZP_07438234.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|306970172|ref|ZP_07482833.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|306974404|ref|ZP_07487065.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|307082112|ref|ZP_07491282.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|307086723|ref|ZP_07495836.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|308375034|ref|ZP_07667929.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|54038804|sp|P65627|OXAA_MYCBO RecName: Full=Membrane protein oxaA gi|54041693|sp|P65626|OXAA_MYCTU RecName: Full=Membrane protein oxaA gi|2808706|emb|CAA16234.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13883933|gb|AAK48406.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31620692|emb|CAD96138.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] gi|124603196|gb|EAY61471.1| hypothetical protein TBCG_03848 [Mycobacterium tuberculosis C] gi|134151969|gb|EBA44014.1| conserved transmembrane protein [Mycobacterium tuberculosis str. Haarlem] gi|148507940|gb|ABQ75749.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis H37Ra] gi|148723656|gb|ABR08281.1| conserved transmembrane protein [Mycobacterium tuberculosis F11] gi|289414283|gb|EFD11523.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289418480|gb|EFD15681.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289440821|gb|EFD23314.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289537004|gb|EFD41582.1| membrane protein oxaA [Mycobacterium tuberculosis K85] gi|289541631|gb|EFD45280.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289688293|gb|EFD55781.1| conserved transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289689046|gb|EFD56475.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289696643|gb|EFD64072.1| membrane protein oxaA [Mycobacterium tuberculosis EAS054] gi|289711618|gb|EFD75634.1| conserved transmembrane protein [Mycobacterium tuberculosis GM 1503] gi|289715658|gb|EFD79670.1| membrane protein oxaA [Mycobacterium tuberculosis T85] gi|298497187|gb|EFI32481.1| membrane protein oxaA [Mycobacterium tuberculosis 94_M4241A] gi|308213435|gb|EFO72834.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|308328152|gb|EFP17003.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308328614|gb|EFP17465.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|308343887|gb|EFP32738.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|308347671|gb|EFP36522.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|308351589|gb|EFP40440.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|308352296|gb|EFP41147.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|308356299|gb|EFP45150.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|308360186|gb|EFP49037.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|308363873|gb|EFP52724.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|323717337|gb|EGB26542.1| membrane protein [Mycobacterium tuberculosis CDC1551A] gi|326905754|gb|EGE52687.1| conserved membrane protein [Mycobacterium tuberculosis W-148] gi|328460699|gb|AEB06122.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207] Length = 366 Score = 103 bits (256), Expect = 8e-20, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 100/265 (37%), Gaps = 39/265 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + + + + +++M ++ L + +Q +T M Sbjct: 10 LDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 69 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L++K+ Q + M +L + H NP+ GC P+L QIPVF +Y V+ Sbjct: 70 QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 128 Query: 450 ---SLEMRHAPFWGWIKD-------LAAADPTNIF--TLFGI---------------LPF 482 + P I++ + D + LFG + F Sbjct: 129 FNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGLDAFVDF 188 Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVVFVFAL 531 P + VG+ I+ ++ + + S A+ AM+ L P+ V Sbjct: 189 SRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFPLGVVVGG 248 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 P +I+YW +N+ + QQ + Sbjct: 249 PFLPLAIILYWFSNNIWTFGQQHYV 273 >gi|306830170|ref|ZP_07463354.1| SpoIIIJ family protein [Streptococcus mitis ATCC 6249] gi|304427696|gb|EFM30792.1| SpoIIIJ family protein [Streptococcus mitis ATCC 6249] Length = 312 Score = 103 bits (256), Expect = 8e-20, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 79/213 (37%), Gaps = 32/213 (15%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ L GC+P Sbjct: 86 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMLGGVGCFP 145 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+Q+P F AIY ++ E + + I DL + I Sbjct: 146 ILIQMPFFSAIYFAAQLT-EGVASSTFLGI-DLGSP---------------------SMI 182 Query: 493 WPIIMSLSMFIQMKMSPPP-ADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + ++Q +S D+ Q ++ P++ V PA + +YW Sbjct: 183 LVAFAGILYYLQSILSLHGVEDEMQREQLKKMIYMSPLMIVVFSFFSPASVTLYWVVGGF 242 Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 + I+QQ ++ + L ++R F+KN Sbjct: 243 MMILQQFIVN--YVVRPKLRKKVREEFAKNPPK 273 >gi|121635907|ref|YP_976130.1| putative inner membrane protein translocase component YidC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121639832|ref|YP_980056.1| putative inner membrane protein translocase component YidC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224992327|ref|YP_002647017.1| putative inner membrane protein translocase component YidC [Mycobacterium bovis BCG str. Tokyo 172] gi|121491554|emb|CAL70011.1| Probable conserved transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121495480|emb|CAL73969.1| Probable conserved transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224775443|dbj|BAH28249.1| putative inner membrane protein translocase component YidC [Mycobacterium bovis BCG str. Tokyo 172] Length = 366 Score = 103 bits (256), Expect = 8e-20, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 100/265 (37%), Gaps = 39/265 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + + + + +++M ++ L + +Q +T M Sbjct: 10 LDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 69 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L++K+ Q + M +L + H NP+ GC P+L QIPVF +Y V+ Sbjct: 70 QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 128 Query: 450 ---SLEMRHAPFWGWIKD-------LAAADPTNIF--TLFGI---------------LPF 482 + P I++ + D + LFG + F Sbjct: 129 FNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGLDVFVDF 188 Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVVFVFAL 531 P + VG+ I+ ++ + + S A+ AM+ L P+ V Sbjct: 189 SRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFPLGVVVGG 248 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 P +I+YW +N+ + QQ + Sbjct: 249 PFLPLAIILYWFSNNIWTFGQQHYV 273 >gi|312862441|ref|ZP_07722684.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus vestibularis F0396] gi|311102084|gb|EFQ60284.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus vestibularis F0396] Length = 284 Score = 103 bits (256), Expect = 8e-20, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 27/202 (13%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-A 414 G+ G+ I++ T+ ++ + PL +Q S+ ++ +QP++ L+ ++ + A Sbjct: 66 FGGSIGLGIIIFTILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENREALAYA 125 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 +LYK H +NP A P+++Q P+ A+Y ++ E+R + W+ DL DP Sbjct: 126 QQELYKEHGVNPYASLLPLIIQFPILMALYGALTRVPELR-EGTFLWV-DLGQKDPYF-- 181 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 I PI+ + F+ ++ A A +L M ++ + F Sbjct: 182 -----------------ILPILAAAFTFLSTWLTNKAAKDRSA-MLLVMNIMLSIFIFWF 223 Query: 535 ----PAGLIIYWSWSNVISIVQ 552 +G+ +YW+ SN +VQ Sbjct: 224 GTQISSGVALYWAVSNAFQVVQ 245 >gi|326390366|ref|ZP_08211925.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter ethanolicus JW 200] gi|325993643|gb|EGD52076.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter ethanolicus JW 200] Length = 206 Score = 103 bits (256), Expect = 8e-20, Method: Composition-based stats. Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 23/220 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IA + L+ + ++ VGN+GIAI++ T+ +++L P +Q + MK IQP ++E Sbjct: 1 MATIAMYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMSTMKKMKEIQPLVEE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L++K+ + PQ L ++LY+ +NP GC P+LL + + + ++ ++ A Sbjct: 61 LQKKYAK-DPQKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTAS- 118 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W+ LA DP I PI+ +++ +I M DK Q Sbjct: 119 FLWMHSLAQKDPYY-------------------IIPILATVTTYISSAM--VATDKSQNS 157 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 158 MNIMMSIFMGWVTVSLPAGVGIYWVTSNIFQIVQQYIFMR 197 >gi|218755713|ref|ZP_03534509.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis GM 1503] gi|297636608|ref|ZP_06954388.1| putative inner membrane protein translocase component YidC [Mycobacterium tuberculosis KZN 4207] gi|308371552|ref|ZP_07667203.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|308336269|gb|EFP25120.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] Length = 363 Score = 103 bits (256), Expect = 8e-20, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 100/265 (37%), Gaps = 39/265 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + + + + +++M ++ L + +Q +T M Sbjct: 7 LDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 66 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L++K+ Q + M +L + H NP+ GC P+L QIPVF +Y V+ Sbjct: 67 QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 125 Query: 450 ---SLEMRHAPFWGWIKD-------LAAADPTNIF--TLFGI---------------LPF 482 + P I++ + D + LFG + F Sbjct: 126 FNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRSGLDAFVDF 185 Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVVFVFAL 531 P + VG+ I+ ++ + + S A+ AM+ L P+ V Sbjct: 186 SRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFPLGVVVGG 245 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 P +I+YW +N+ + QQ + Sbjct: 246 PFLPLAIILYWFSNNIWTFGQQHYV 270 >gi|322690180|ref|YP_004209914.1| hypothetical protein BLIF_2003 [Bifidobacterium longum subsp. infantis 157F] gi|320461516|dbj|BAJ72136.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis 157F] Length = 310 Score = 103 bits (256), Expect = 9e-20, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 22/242 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + F +M + ++ +AI++ + V+ FPL KQ S M+ + PK Sbjct: 1 MQTWIMKIVHDFFVMLGVSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKMQALAPK 60 Query: 396 IDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + ++ K+K Q ++ ++LY+ +++NP C P+L+Q PVF +++ +S Sbjct: 61 MQRIQNKYKGKTDQASREAMSRETMKLYQDNDVNPAGSCLPMLIQGPVFMSMFYTLSAIP 120 Query: 452 EMR-HAPFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIMSLSMFI 503 + D+A A +FGI+ G +GI+ +M ++ Sbjct: 121 YIANGKRDALGAFDVATAKQFTQTDVFGIVSVTDNFTSAAASGKAVIGIFVFLMCFCLWF 180 Query: 504 QM----KMSPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 K + A Q +L PV+++F+ + P +++YW +NV ++ + Sbjct: 181 MQYFSMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGVAMPFAVLVYWLTNNVCNLCRT 240 Query: 554 AV 555 Sbjct: 241 LW 242 >gi|310288302|ref|YP_003939561.1| preprotein translocase subunit YidC [Bifidobacterium bifidum S17] gi|309252239|gb|ADO53987.1| preprotein translocase subunit YidC [Bifidobacterium bifidum S17] Length = 336 Score = 103 bits (256), Expect = 9e-20, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 111/296 (37%), Gaps = 34/296 (11%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + L + F+ + + ++ +AI+ + V Sbjct: 8 LLDRGIWGWLYKLLTPLEWLMTQVMVLFHKFLTLLGMAPIGISWVLAIVFLVLVVHACIL 67 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWP 432 P+ KQ S M+ +QPK+ ++ K+K Q + + M++LY+ ++ NP+ CW Sbjct: 68 PIYLKQMKSMRKMQALQPKMQHIQNKYKGKKDQASKEAMSREMMKLYQDNDANPMGSCWT 127 Query: 433 ILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL---- 484 ++Q PVF ++ ++ I+ R A D A A+ +FG+ Sbjct: 128 AVIQGPVFMCMFYMLSAIPYIATGKRGA---LGAFDQATAEQFAQTRVFGVSVTDTFGTA 184 Query: 485 --PGFMHVGIWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALS 532 G + +G + ++M M+ + K Q + P++++F+ Sbjct: 185 NNSGKVVIGFFILLMCACMWYMQFNNMRKNLPKASMQGSTYKMQQAMTWGFPIMYIFSGI 244 Query: 533 SFPAGLIIYWSWSNVISIVQQAV-IMK------MHGAEIGLIDRLRSTFSKNYNSQ 581 FP +++YW +N ++ + + K E + D + + Q Sbjct: 245 MFPFAVLVYWLTNNACNLARSLFQVYKFPTPGSRAAEEKEIRDHRQENARRAKAGQ 300 >gi|229491230|ref|ZP_04385058.1| putative membrane protein [Rhodococcus erythropolis SK121] gi|229321968|gb|EEN87761.1| putative membrane protein [Rhodococcus erythropolis SK121] Length = 368 Score = 103 bits (256), Expect = 9e-20, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 106/297 (35%), Gaps = 56/297 (18%) Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ ++ + + ++++ ++ + + KQ +T Sbjct: 1 MLNFIYYPVSAILWVWHKVFGFILGPDNGIAWALSVVFLVFTLRAVLYKPFVKQVRTTRQ 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP+I L++K+ Q M +L K H NP+ GC P+L Q PVF ++ V+ Sbjct: 61 MQELQPQIKALQKKYSG-DRQRQAVEMQKLQKEHGFNPIMGCLPVLAQAPVFIGLFHVLR 119 Query: 449 I-------------SLE----------------------MRHAPFWGWIKDLAAADPTNI 473 S E + AP I A + Sbjct: 120 SFNRTGTGMGQLGMSAEDNLNTPNYVFSATDVQSFLDARLFGAPISAAITTPVAQLQAYV 179 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWM 523 LP L + II S++ + S A Q+ I+ Sbjct: 180 TENVPELPSRLNIILVAAPLMIIASIATHFNSRASVARQSEAAAANPQSAIMNKLALYVF 239 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 P+ + P +++YW +N+ + QQ ++ + AE + + +N N+ Sbjct: 240 PLGVLVGGPFLPIAILLYWVSNNIWTYGQQHLVFRKIDAEEEAKKQ-EAITRRNDNA 295 >gi|294786223|ref|ZP_06751477.1| membrane protein OxaA [Parascardovia denticolens F0305] gi|315225756|ref|ZP_07867544.1| membrane protein OxaA [Parascardovia denticolens DSM 10105] gi|294485056|gb|EFG32690.1| membrane protein OxaA [Parascardovia denticolens F0305] gi|315119888|gb|EFT83020.1| membrane protein OxaA [Parascardovia denticolens DSM 10105] Length = 329 Score = 103 bits (256), Expect = 9e-20, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 87/221 (39%), Gaps = 19/221 (8%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 F A +Q ++ + K + + + + +++Y+ +++NP C P L Sbjct: 65 FIKQMVSMRNMQAVQPQLQKIQNKYKGKTDPASREAMSRETMKIYQDNHVNPAGSCIPAL 124 Query: 435 LQIPVFFAIYKVI-SISLEMRHAPFWGWIKDLAA---ADPTNIFTLFGILPF---YLPGF 487 +Q PVF A++ + ++ A D A +F + F G Sbjct: 125 IQSPVFMAMFYTLSMVTYISNGARGPLGAFDKAVSTEFAQARVFNITLSSMFTTANPGGK 184 Query: 488 MHVGIWPIIMSLSMFIQMKMS---PPPADKGQ------AMILNW-MPVVFVFALSSFPAG 537 + +GI+ +M +MF + P Q M++++ PV+++F+ +FP Sbjct: 185 ITIGIFVALMCFTMFYSQWHNTRRNMPRASMQGRSYRTQMMMSFIFPVMYIFSGIAFPFA 244 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE--IGLIDRLRSTFSK 576 +++YW +N+ ++ Q + + + + Sbjct: 245 VLVYWLTNNIWTLGQTFWQTYNMPTPGSPAAEAKEKRDYKR 285 >gi|196003362|ref|XP_002111548.1| hypothetical protein TRIADDRAFT_23561 [Trichoplax adhaerens] gi|190585447|gb|EDV25515.1| hypothetical protein TRIADDRAFT_23561 [Trichoplax adhaerens] Length = 305 Score = 103 bits (256), Expect = 9e-20, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 94/238 (39%), Gaps = 39/238 (16%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 Y + + ++ VG IM+ T ++ L PL + Y ++A M NI P + Sbjct: 35 YTPIGLLQHAIDSLHSYVGLPWWGSIMVATAILRALTLPLVVRSYRNSARMNNISPTVSR 94 Query: 399 LREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISIS 450 L K + +P Q + + L++ HN NP LLQ+PVF + ++ + Sbjct: 95 LMNKMRAAPTQQEAALYSQELRLLFQKHNCNPFKSLISPLLQVPVFISFFLGLRRMCTAP 154 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM--- 507 LE W DL AADP + P++ ++M + +++ Sbjct: 155 LESMKDGGMYWFTDLTAADPYY-------------------VLPVLSCVTMLLTLELGTE 195 Query: 508 ----SPPPADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + ++ ++ + + + FP + YW SN S++Q ++ Sbjct: 196 VGARNSGMQQQATMKVMKIVFRFLAIGMLPVTAQFPTAIFCYWLTSNSCSMLQMVILN 253 >gi|326503820|dbj|BAK02696.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 421 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 100/247 (40%), Gaps = 35/247 (14%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E+ +F + ++ + G N+ I LTTV ++ PL Q S+ + Sbjct: 121 EVAAAATDSFFPVAALQHVIDTIHTFTGLNWWACIALTTVLIRTATIPLLVSQLKSSQKL 180 Query: 390 KNIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 I+P+++ +++ + P+ + M L++ H ++P + IL+Q P+F + + Sbjct: 181 NAIKPEMEAIKDAMDSTDPKSALEGKYKMTALFQKHGVSPFSPLKGILIQGPMFMSFFFA 240 Query: 447 ISISLE----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 I+ +E M+ + W DL DP I P++ +L+ Sbjct: 241 INNMVEKVPSMKGGGVF-WFTDLTTPDPLYIC-------------------PVLAALTFL 280 Query: 503 IQMKMS---PPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++++ + + + M ++ V +F G+ YW SN+ S+ ++ Sbjct: 281 ATVELNLQEGMEGNSMAGKMKTFSRGMALMTVPFTMNFAKGIFCYWITSNLFSLG-YGIV 339 Query: 557 MKMHGAE 563 M+ Sbjct: 340 MRRPAVR 346 >gi|222151988|ref|YP_002561148.1| hypothetical protein MCCL_1745 [Macrococcus caseolyticus JCSC5402] gi|222121117|dbj|BAH18452.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 286 Score = 103 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 106/289 (36%), Gaps = 36/289 (12%) Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV-----GNFGIAIM 365 K+ + + + + + + F + + + N+G+AI+ Sbjct: 1 MKKKSIWLLVFTAAIILSGCDYSKESNRNGFFYDTFVHPLDQLIHWLGAHMGHNYGLAII 60 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMK--------NIQPKIDELREKFKQSPPQVLQKAMIQ 417 T+ V+L FP K Y + + M+ + + ++ Q + M+ Sbjct: 61 AITLIVRLALFPFMMKTYKNQSVMREKMALIKPQMTEIQERVKRARTQEEKMEANQEMMA 120 Query: 418 LYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLE--MRHAPFWGWIKDLAAADPTNIF 474 LYK + INPL GC P+L+Q+P+ ++ V+ E + P + W + Sbjct: 121 LYKENGINPLNMGCLPLLIQLPIVTGLFYVLKYPTEGGITQYPNFLWFE----------- 169 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 I I+ +L ++ M+ P M++ P++ V+ + Sbjct: 170 -------LTKTDIAMTVIAGIVYALQAYVSMQNIPEEQKAQMRMMMFISPIMIVWMSAIS 222 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEI--GLIDRLRSTFSKNYNSQ 581 PA L +YW+ ++Q + K + ++ + + + Q Sbjct: 223 PAALPLYWAVGGAFLVLQTWLGNKFYKKKVHEEIAPLIEAHEENERAKQ 271 >gi|237738569|ref|ZP_04569050.1| inner membrane protein YIDC [Fusobacterium sp. 2_1_31] gi|229424052|gb|EEO39099.1| inner membrane protein YIDC [Fusobacterium sp. 2_1_31] Length = 206 Score = 103 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 23/208 (11%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 VGNFG++I++ T+ +K+ PL KQ S MK IQP++++L+EK+ Q+L Sbjct: 19 TDKYVGNFGVSIIIVTILIKIALLPLTLKQDKSMKEMKKIQPELEKLKEKYANDK-QMLN 77 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 ++LYK H +NPL GC P+LLQ+P+ FA++ V+ + + + W+K L DP Sbjct: 78 IKTMELYKEHKVNPLGGCLPLLLQLPILFALFGVLRSGI-IPADSSFLWLK-LPEPDPFF 135 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-ILNWMPVVFVFAL 531 + P++ F Q K+ Q ++ P++ +F Sbjct: 136 -------------------VLPVLNGAVSFFQQKLMGSADSNPQMKNMMYIFPIMMIFIS 176 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKM 559 P+GL +YW S+++++VQQ IMK Sbjct: 177 YRMPSGLQLYWLTSSILAVVQQYFIMKK 204 >gi|270292097|ref|ZP_06198312.1| SpoIIIJ family protein [Streptococcus sp. M143] gi|270279625|gb|EFA25467.1| SpoIIIJ family protein [Streptococcus sp. M143] Length = 309 Score = 103 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 94/260 (36%), Gaps = 40/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--------FPLAKKQYVSTA 387 + W A + + ++ FG+ I++ T+ V+L+ + A Sbjct: 39 FIWNTIGAPMAEAIKYFANDMGLGFGMGIIIVTIIVRLIILPLGIYQSWKATLHSEKMNA 98 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 ++P L+E Q Q+A+ K H I+ L GC+PILLQ+P F AIY Sbjct: 99 LKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMLGGVGCFPILLQMPFFSAIYF 158 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + F + P + + +IQ Sbjct: 159 AAQHTEGVAGSS-------------------FLGIELGSPSML----LVAFAGILYYIQS 195 Query: 506 KMSPPP-ADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D+ Q ++ P++ V PA + +YW + I+QQ ++ + Sbjct: 196 LLSLHGVEDEMQREQLKKMIYMSPLMIVIFSLFSPASVTLYWVVGGFMMILQQFIVN--Y 253 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 L ++R + KN Sbjct: 254 VVRPKLRQKVREEYEKNPPK 273 >gi|326804334|ref|YP_004322152.1| stage III sporulation protein J [Aerococcus urinae ACS-120-V-Col10a] gi|326650548|gb|AEA00731.1| stage III sporulation protein J [Aerococcus urinae ACS-120-V-Col10a] Length = 253 Score = 103 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 27/224 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + +++ ++G+ I++ T+ +LL PL Q +T M+ +QP++ L Sbjct: 15 YVLYNLSQIIIWLSGVFGNSYGMGIIVFTILARLLLTPLYSLQMKNTEKMQKMQPELRAL 74 Query: 400 REKFKQSP---PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +EK+ Q LQ+ +L + ++ N AGC P+L+Q+P+ A+Y+ IS + + + Sbjct: 75 QEKYASRDAETQQKLQEETAKLQEKYDTNQFAGCLPLLIQLPILTALYQAISRTEALTN- 133 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---D 513 + W++ L DP I PII ++S++ +S + Sbjct: 134 GHFLWME-LGKPDPYF-------------------ILPIIAAVSIWYSTHLSQIASGIKS 173 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + MPV F + + P+ L +Y + +NV +I Q +I Sbjct: 174 GSMTAMQYVMPVFIFFVMMNLPSALALYMATANVFTIGQTLLIN 217 >gi|187934380|ref|YP_001887736.1| inner membrane protein translocase component YidC [Clostridium botulinum B str. Eklund 17B] gi|187722533|gb|ACD23754.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum B str. Eklund 17B] Length = 259 Score = 103 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 18/230 (7%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FE +I + F F++ ++ ++ +AI++ T+ ++L+ PL K ST Sbjct: 1 MFEKIIQFMANIFNYLHDFIVNLGVSDVGLSYVLAILIFTLMIRLIILPLNIKAAKSTQK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QPK+ +L+EK+K +P + L + M + YK ++++ GC P LL +P+ A+Y V Sbjct: 61 MQAVQPKMKKLQEKYKGNPEK-LNEEMRKFYKENDVSVTGGCLPSLLPLPILMALYYVFF 119 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 M A + WI DL A D T I + L YLP ++ K + Sbjct: 120 RIEGMNGAS-FLWIADLGAKDKTMILPILAALSTYLPS---------------YLMTKAT 163 Query: 509 PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P + M ++ F +F + L++YW NVI +Q + Sbjct: 164 PMDDSPMNMGTMSLVMALMMGFMSINFKSILVLYWIIGNVIQSIQTYFLN 213 >gi|307265440|ref|ZP_07546996.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter wiegelii Rt8.B1] gi|306919554|gb|EFN49772.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter wiegelii Rt8.B1] Length = 206 Score = 103 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 23/220 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IA + L+ + ++ VGN+GIAI++ T+ +++L P +Q + MK IQP I+E Sbjct: 1 MATIAMYLGQLLEFIHHYVGNYGIAIIIFTILIRILLLPFYIQQMSTMKKMKEIQPLIEE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L++K+ + PQ L ++LY+ +NP GC P+LL + + + ++ ++ A Sbjct: 61 LQKKYAK-DPQKLNMETMKLYQEKKVNPFGGCLPMLLPLIILWPLFTMLRTYPAFSTAS- 118 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W+ LA DP I PI+ +++ +I M DK Q Sbjct: 119 FLWMHSLAQKDPYY-------------------IIPILATVTTYISSAM--VATDKSQNS 157 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 158 MNIMMSIFMGWVTVSLPAGVGIYWVTSNIFQIVQQYIFMR 197 >gi|251780751|ref|ZP_04823671.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085066|gb|EES50956.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 259 Score = 103 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 18/230 (7%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FE +I + F F+L ++ ++ +AI++ T+ ++LL PL K ST Sbjct: 1 MFEKIIQFMANIFNYLHDFILNLGVSDVGLSYVLAILIFTLMIRLLILPLNIKAAKSTQK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP++ +L+EK+K +P + L + M + YK ++++ GC P LL +P+ A+Y V Sbjct: 61 MQAVQPQMKKLQEKYKGNPEK-LNEEMRKFYKENDVSLTGGCLPSLLPLPILMALYYVFF 119 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 M A + WIKDL A D T I + + YLP ++ K + Sbjct: 120 RIEGMNGAS-FLWIKDLGARDTTMILPILAAISTYLPS---------------YLMTKAT 163 Query: 509 PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P + M ++ F +F + L++YW NVI +Q + Sbjct: 164 PMDDSPMNMGTMSLVMALMMGFMSINFKSILVLYWIIGNVIQTIQTYFLN 213 >gi|223933720|ref|ZP_03625694.1| 60 kDa inner membrane insertion protein [Streptococcus suis 89/1591] gi|330833337|ref|YP_004402162.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3] gi|223897601|gb|EEF63988.1| 60 kDa inner membrane insertion protein [Streptococcus suis 89/1591] gi|329307560|gb|AEB81976.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3] Length = 304 Score = 103 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 99/253 (39%), Gaps = 40/253 (15%) Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKNIQ 393 + ++ +PM L+ +F + FG+AI++ T+ V+ + + K + + M ++ Sbjct: 37 WDWLGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYLK 96 Query: 394 PKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 P + ++E+ K + Q Q + K + ++ L GC P+L+Q+P F AIY Sbjct: 97 PILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFAA 156 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 RH P L + I ++ + + Q + Sbjct: 157 ------RHTPGISEATFLG-----------------INLGSTSLILTVVAGILYYAQSLL 193 Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 D+ Q + M P++ + PAG+ +YW + I+QQA+ + Sbjct: 194 MQVGMDEEQKKQMKTMALMNPIMIMMFSFGSPAGVTLYWVVGGLFGILQQAITN--FILK 251 Query: 564 IGLIDRLRSTFSK 576 + ++ F Sbjct: 252 PRIRKQVEEEFKN 264 >gi|188588551|ref|YP_001922719.1| putative inner membrane protein translocase component YidC [Clostridium botulinum E3 str. Alaska E43] gi|188498832|gb|ACD51968.1| putative sporulation protein/membrane protein insertase, OxaA family [Clostridium botulinum E3 str. Alaska E43] Length = 259 Score = 103 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 18/230 (7%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FE +I + F F+L ++ ++ +AI++ T+ ++LL PL K ST Sbjct: 1 MFEKIIQFMANIFNYLHDFILNLGVSDVGLSYVLAILIFTLMIRLLILPLNIKAAKSTQK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP++ +L+EK+K +P + L + M + YK ++++ GC P LL +P+ A+Y V Sbjct: 61 MQAVQPQMKKLQEKYKGNPEK-LNEEMRKFYKENDVSLTGGCLPSLLPLPILMALYYVFF 119 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 M A + WIKDL A D T I + + YLP ++ K + Sbjct: 120 RIEGMNGAS-FLWIKDLGARDTTMILPVLAAISTYLPS---------------YLMTKAT 163 Query: 509 PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P + M ++ F +F + L++YW NVI +Q + Sbjct: 164 PMDDSPMNMGTMSLVMALMMGFMSINFKSILVLYWIIGNVIQTIQTYFLN 213 >gi|308235529|ref|ZP_07666266.1| membrane protein insertase, YidC/Oxa1 family [Gardnerella vaginalis ATCC 14018] gi|311114011|ref|YP_003985232.1| membrane protein OxaA [Gardnerella vaginalis ATCC 14019] gi|310945505|gb|ADP38209.1| membrane protein OxaA [Gardnerella vaginalis ATCC 14019] Length = 335 Score = 103 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 109/256 (42%), Gaps = 21/256 (8%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + + ++ + ++ ++I+ + V F Sbjct: 8 LLDNGIWGWFYKILTPVEWLMTQVMSLFHKLFVLIGMNEIGFSWVLSIVFLVLVVHACIF 67 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWP 432 P K NM+ I PK+ ++++K+K + +Q+ M++LY+ +N NP C P Sbjct: 68 PAFIKSIKGMRNMQAIAPKMKKIQQKYKGKSDPASKEAMQREMMKLYQENNANPAGSCLP 127 Query: 433 ILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL------P 485 +++Q P F +I+ +S+ R D+A A +FG+ Sbjct: 128 MMIQGPAFMSIWYTLSVIPFIARGKHTALGAFDVATAQQFVKTHVFGVGVSDTFMTVQAG 187 Query: 486 GFMHVGIWPIIMSLSMFIQM----KMSPPPADK------GQAMILNWMPVVFVFALSSFP 535 G + + I+ I+M +M+ + + PP K Q +++ P+++VF+ + P Sbjct: 188 GKVVIVIFVILMCAAMWYMQFNNIRKNLPPESKQGPQYTMQKLMMWGFPLIYVFSAFALP 247 Query: 536 AGLIIYWSWSNVISIV 551 +++YW +N+++++ Sbjct: 248 FAMLVYWLVNNIMNML 263 >gi|227513522|ref|ZP_03943571.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus buchneri ATCC 11577] gi|227524665|ref|ZP_03954714.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus hilgardii ATCC 8290] gi|227083395|gb|EEI18707.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus buchneri ATCC 11577] gi|227088149|gb|EEI23461.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus hilgardii ATCC 8290] Length = 343 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 103/255 (40%), Gaps = 40/255 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + ++A+P +M +VG++G AI++ TV V++ P+ +Q S+ + I Sbjct: 37 YDYLARPAQSIMEAIAQIVGSYGWAIVVLTVIVRMFLLPIMVRQMKSSTIQQERMQMIRP 96 Query: 399 LREKFKQS--------PPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVIS 448 + +Q +AM+ LY+ +NI+ GC P+++Q+P+F A+Y I Sbjct: 97 QMRELQQRQKAAKTTEEQTAASQAMMALYRQNNISMTGGIGCLPLIIQMPIFTALYAAIR 156 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S E+ H T+F + ++ ++ LS +Q + Sbjct: 157 YSPELSH-------------------TVFMGIRLGQSSWL----LAVLSFLSYLLQGYLM 193 Query: 509 PPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 K Q ++ P++ + S PAGL IY+ + + +Q ++ Sbjct: 194 MLGTPKAQKKQMGAMMLMSPIMILLFTISAPAGLGIYFFIGGLFACLQTIIMN---LYRP 250 Query: 565 GLIDRLRSTFSKNYN 579 G+ ++ Sbjct: 251 GIRKKIAKEMEGKKP 265 >gi|222153767|ref|YP_002562944.1| membrane protein OxaA 1 [Streptococcus uberis 0140J] gi|222114580|emb|CAR43555.1| membrane protein OxaA 1 precursor [Streptococcus uberis 0140J] Length = 270 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 104/251 (41%), Gaps = 27/251 (10%) Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 K + A R + + F + + G+ GI I+L T+ ++ Sbjct: 6 KIAALLPMLTLLAACSRGNVSAQSSNGWDQLVYFFAKSVQWLSFNGSIGIGIILFTLLIR 65 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP---PQVLQKAMIQLYKTHNINPLAG 429 +L PL Q S+ M++IQP++ +L+ K+ L + LYK H +NP A Sbjct: 66 ILLMPLFNMQMKSSQKMQDIQPELKKLQMKYPGKDTESRMALAEESQALYKAHGVNPYAS 125 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 P+L+Q+PV A+++ ++ ++ + W+ LA DP Sbjct: 126 MLPLLIQMPVMIALFQALTRVPFLK-TGTFMWVS-LAQHDPYF----------------- 166 Query: 490 VGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 I P++ ++ F+ ++ A + ++ MP++ +G+++YW SN Sbjct: 167 --ILPVLAAVLTFLSTWLTNLAAREKNVVMTIMTYMMPIMIFLMGFKLASGVVLYWVVSN 224 Query: 547 VISIVQQAVIM 557 + Q ++ Sbjct: 225 AFQVFQLLLLN 235 >gi|110740108|dbj|BAF01955.1| chloroplast membrane protein [Arabidopsis thaliana] Length = 201 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 9/113 (7%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAM---ILNWMPVVFVFALS 532 G P + + P+++ S ++ M++ PP D Q + ++P++ + Sbjct: 8 GHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFAL 67 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR----LRSTFSKNYNSQ 581 S P+GL IYW +NV+S QQ + K+ GA+ + + + + +K +Q Sbjct: 68 SVPSGLSIYWLTNNVLSTAQQVYLRKLGGAKPNMDENASKIISAGRAKRSIAQ 120 >gi|289579532|ref|YP_003478159.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter italicus Ab9] gi|289529245|gb|ADD03597.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter italicus Ab9] Length = 206 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 23/220 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IA + L+ + Y VGN+G AI++ T+ +++L P +Q + MK IQP I E Sbjct: 1 MATIAMYLGELLEFIYKYVGNYGTAIIIFTILIRILLLPFYVQQMNTMKKMKEIQPLIQE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L++K+ + PQ L ++LY+ +NP GC P+LL + + + ++ ++ A Sbjct: 61 LQKKYAK-DPQKLNIETMKLYQEKKVNPFGGCLPMLLPLIILWPLFAMLRTYPAFSTAS- 118 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W+ LA DP I PI+ +++ +I M DK Q Sbjct: 119 FLWMHSLAERDPYY-------------------IIPILATVTTYISSAM--VATDKSQNS 157 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 158 MNIIMSIFIGWITVSLPAGIGIYWVTSNIFQIVQQYIFMR 197 >gi|253681205|ref|ZP_04862003.1| OxaA [Clostridium botulinum D str. 1873] gi|253562443|gb|EES91894.1| OxaA [Clostridium botulinum D str. 1873] Length = 247 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 8/233 (3%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + F + + F N ++G+ I++ T+ ++++ FPL KQ S M IQP+I Sbjct: 22 FVKFFQVIHSWVHTLFTNPNISYGLTIIVLTLIIRIVLFPLNYKQIKSQVAMTEIQPEIK 81 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +L+EK+K PQ Q+ M++LYK + +NPL GC P+LLQ P+ A++ V + + P Sbjct: 82 KLQEKYKN-DPQRQQQEMMKLYKEYGVNPLGGCLPLLLQWPILIALFYVFNNL--SKIEP 138 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + L + + P Y ++ + ++ S I + A Q Sbjct: 139 SIVNVTFLGVK----LMEPAILKPEYWYTWILPIVSALLTYFSTVIMTSKNSDSAQVKQT 194 Query: 518 MILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 +++ +M + V+ FP L++YW +++ I Q + + + L+ Sbjct: 195 KMMSGFMTLFVVYMSFKFPTALVLYWITNSLFQIGQTVITQRSQQKKKELVQE 247 >gi|255994567|ref|ZP_05427702.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium saphenum ATCC 49989] gi|255993280|gb|EEU03369.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium saphenum ATCC 49989] Length = 240 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 42/258 (16%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 I PM ++S+ Y+ +GN+G+ ++L T+ VKL+ FPL K Q ++T M +QPK+ ++ Sbjct: 6 NLIVLPMGKILSFLYSFIGNYGVTLILLTLIVKLVTFPLYKSQMLNTLKMAELQPKMKDI 65 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS--------- 450 + +F +L M +LYK NP GC P+L+Q+P+ F ++ ++ Sbjct: 66 QARF-GHDKALLGAKMQELYKEEKYNPAGGCLPMLIQMPIIFGLFSLLRDPLSYISDQQL 124 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + H P + WI DL+ D I PI+ ++ FI +S Sbjct: 125 IFAVHEP-FLWIADLSHPDKW--------------------ILPILAGVATFISFSLSQQ 163 Query: 511 PADKGQA-------MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 ++ + PV V SFPAGL IYW + +Q + + ++ Sbjct: 164 AQMGTGQANPASGMKVMKYIFPVAIVLIGRSFPAGLAIYWFFG---QFIQIFISIHLNSV 220 Query: 563 EIGLIDRLRSTFSKNYNS 580 + + + + Sbjct: 221 RKKMNQQKEKSKRMKKAA 238 >gi|242040481|ref|XP_002467635.1| hypothetical protein SORBIDRAFT_01g031260 [Sorghum bicolor] gi|241921489|gb|EER94633.1| hypothetical protein SORBIDRAFT_01g031260 [Sorghum bicolor] Length = 420 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 94/246 (38%), Gaps = 35/246 (14%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P F +A ++ + N+ I LTT+ ++ PL Q +T Sbjct: 117 FPGEVAAAAADSFPPVAALQHIIDAIHTFTGLNWWACIALTTLIIRSATIPLLVNQLKAT 176 Query: 387 ANMKNIQPKIDELREKF--KQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAI 443 ++ I P+++ ++++ +A ++ L+K H ++P +L+Q P+F + Sbjct: 177 TKLRAINPEMEAIKDQMNSMDPKSAQEGQAKMKALFKKHGVSPFTPMKGLLIQGPMFMSF 236 Query: 444 YKVISISLEMRHAPFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 Y IS +E P + W DL D + P++ Sbjct: 237 YFAISNMVE--KVPSFKGGGALWFTDLTTPDSLY-------------------VLPVLTG 275 Query: 499 LSMFIQMKMS---PPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 L+ + ++++ + + + M V+ V +F + YW SN+ +++ Sbjct: 276 LTFLVTVELNLQEGMEGNPMAGKMKTFSRGMAVLTVPFTMNFAKAIFCYWITSNIFTLLY 335 Query: 553 QAVIMK 558 VI + Sbjct: 336 GIVIRR 341 >gi|118466815|ref|YP_884420.1| inner membrane protein translocase component YidC [Mycobacterium avium 104] gi|118168102|gb|ABK68999.1| membrane protein OxaA [Mycobacterium avium 104] Length = 350 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 99/279 (35%), Gaps = 41/279 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + + + + +++M ++ L + +Q +T M Sbjct: 7 LDFVYYPVSWIMWVWYKLFAAMLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 66 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L++K+ Q + M +L + H NP+ GC P+L QIPVF +Y V+ Sbjct: 67 QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRS 125 Query: 450 ---SLEMRHAPFWGWIKD---------------------LAAADPTNIFTLFGILPFYL- 484 + P +++ A + G+ F Sbjct: 126 FNRTTGGFGQPHLSVVQNRLTGNYVFTPTDVGHFLDANLFGAPIGAFMTQRTGLDAFTYF 185 Query: 485 --PGFMHVGIWP--IIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWMPVVFVFA 530 P + VG P I+ ++ + + SP A Q ++ P+ V Sbjct: 186 SRPAVIAVG-LPVMILAGVATYFNSRASVARQSPEAAANPQTAMMNKLALYVFPLGVVVG 244 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P +I+YW +N+ + QQ + M E + Sbjct: 245 GPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQ 283 >gi|198465469|ref|XP_001353642.2| GA19566 [Drosophila pseudoobscura pseudoobscura] gi|198150173|gb|EAL31156.2| GA19566 [Drosophila pseudoobscura pseudoobscura] Length = 438 Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 85/211 (40%), Gaps = 38/211 (18%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQ 412 + AI + T+ V+ + FPL ++A M N P++ L+ K ++ Sbjct: 150 WWGAIAVGTLVVRTIIFPLVILAQRNSAKMNNNMPQMQLLQLKMTEARQSGNAIESARYA 209 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468 + M+ + +NPL L Q P+F + ++ + ++ W +DL A Sbjct: 210 QEMMLFMRDKGVNPLKNMIVPLAQAPLFISFFMGLRQMANTPVDSMRDGGLWWFQDLTLA 269 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQAMILN 521 DP I P+I S ++++ ++S + +L Sbjct: 270 DPFY-------------------ILPLITSATLYLTIEIGTDSARLSAANMNTM-KYVLR 309 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +P+V +FPA ++ YW+ SN IS+ Q Sbjct: 310 ALPLVIFPFTMNFPAAILTYWACSNFISLGQ 340 >gi|183985455|ref|YP_001853746.1| transmembrane protein [Mycobacterium marinum M] gi|183178781|gb|ACC43891.1| conserved transmembrane protein [Mycobacterium marinum M] Length = 371 Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 99/256 (38%), Gaps = 39/256 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + +++M ++ L + +Q +T M+ +QP+I Sbjct: 19 WIMWVWYKLFALVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKA 78 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS-------- 450 L++K+ Q + M +L + H NP+ GC P+L QIPVF +Y V+ Sbjct: 79 LQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRSFNRTTGGFG 137 Query: 451 ------LEMRHAPFWGWIK-DLAAADPTNIFT------------LFGILPFYLPGFMHVG 491 +E R + + D+ N+F L + F P + VG Sbjct: 138 QPHLSVVENRLTGNYVFTPTDVGHFLDANLFGAPIGASMTQRGGLDAFVDFSRPAVIAVG 197 Query: 492 I-WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVVFVFALSSFPAGLII 540 + ++ ++ + + S A+ AM+ L P+ V P +I+ Sbjct: 198 VPVMVLAGVATYFNSRASVARQSAEAAANPQTAMMNKLALYVFPLGVVVGGPFLPLAIIL 257 Query: 541 YWSWSNVISIVQQAVI 556 YW +N+ + QQ + Sbjct: 258 YWFSNNIWTFGQQHYV 273 >gi|194751063|ref|XP_001957846.1| GF23816 [Drosophila ananassae] gi|190625128|gb|EDV40652.1| GF23816 [Drosophila ananassae] Length = 448 Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 94/254 (37%), Gaps = 39/254 (15%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + P F + GW M + + + AI + T+ V+ + F Sbjct: 117 ELVNLVNASGEPTFASIGLGGWSPVGIVQNCMEFLHCTWELP-WWGAIAVGTLVVRTIIF 175 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAG 429 PL ++A M N P++ L+ K ++ + M+ + +NPL Sbjct: 176 PLVILAQRNSAKMNNNMPQMQLLQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKN 235 Query: 430 CWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 L Q P+F + ++ + ++ W DL ADP Sbjct: 236 MVVPLAQAPLFISFFMGLRQMANTPVDSMRDGGLFWFTDLTLADPLY------------- 282 Query: 486 GFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 + P+I S ++++ ++S + +L +P+V +FPA + Sbjct: 283 ------LLPLITSATLYLTIEIGTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAI 335 Query: 539 IIYWSWSNVISIVQ 552 + YW+ SN IS+ Q Sbjct: 336 LTYWACSNFISLGQ 349 >gi|220930846|ref|YP_002507755.1| hypothetical protein Ccel_3488 [Clostridium cellulolyticum H10] gi|220001174|gb|ACL77775.1| 60 kDa inner membrane insertion protein [Clostridium cellulolyticum H10] Length = 281 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 120/278 (43%), Gaps = 51/278 (18%) Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 F + +P+ + + Y + N+G+A+++ T+ V+ + PL +QY S+A M+ +QP Sbjct: 1 MFDILIRPLGQFLYWIYKTIAFENYGLALIIFTIIVRSIMVPLTLRQYKSSAEMQKVQPL 60 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-------- 447 + E++ K+ + L + M++LY+ H INP GC P+L+Q+P+ A+++ I Sbjct: 61 LQEIQRKYANDKAK-LNEEMMKLYQEHKINPAGGCLPLLIQMPILLALWQAITKPLKYML 119 Query: 448 --------SISLEM-------------------RHAPFWGWIKDLAAADPTNIFTLFGIL 480 ++++E R ++ L I Sbjct: 120 GFTATQLNNLAVESKIPINSAYSEINTITHFMSRGEGEKVGNLNMFFPSHGFGINLGDIP 179 Query: 481 PFYLPGFMHVGIWPIIMSLSM------FIQMKMSPP-------PADKGQAMILNWMPVVF 527 ++ ++ +++ L + ++ ++MS P A+ ++ P++ Sbjct: 180 TWHFNEIVNNPKNAVLLLLPLIATLTTYLTVRMSMPKSKTTDKAANPMGNSMMYISPIMT 239 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + FPAGL +YW NV +I QQ + K + Sbjct: 240 LIFSFQFPAGLALYWIAGNVFAIAQQYYVNKYVLNKKE 277 >gi|312133635|ref|YP_004000974.1| yidc2 [Bifidobacterium longum subsp. longum BBMN68] gi|311772893|gb|ADQ02381.1| YidC2 [Bifidobacterium longum subsp. longum BBMN68] Length = 335 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 104/248 (41%), Gaps = 22/248 (8%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + F +M + ++ +AI++ + V+ FPL KQ S M Sbjct: 20 LTPVEWLQTWIMKIVHDFFVMLGVSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKM 79 Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + + PK+ ++ K+K Q + + ++LY+ ++ NP C P+L+Q PVF +++ Sbjct: 80 QALAPKMQRIQNKYKGKTDQASKEAMSRETMKLYQDNDANPAGSCLPMLIQGPVFMSMFY 139 Query: 446 VISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIM 497 +S + D+A A +FGI+ G +GI+ +M Sbjct: 140 TLSAIPYIANGKRDALGAFDVATAKQFTQTDVFGIVSVTDNFTSAAASGKAVIGIFVFLM 199 Query: 498 SLSMFIQM----KMSPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 ++ K + A Q +L PV+++F+ + P +++YW +NV Sbjct: 200 CFCLWFMQYFSMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGVAMPFAVLVYWLTNNV 259 Query: 548 ISIVQQAV 555 ++ + Sbjct: 260 CNLCRTLW 267 >gi|302024343|ref|ZP_07249554.1| membrane protein OxaA 2 precursor [Streptococcus suis 05HAS68] Length = 249 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 81/233 (34%), Gaps = 35/233 (15%) Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ- 412 I +L + L + K + + M ++P + ++E+ K + Q Q Sbjct: 2 PRFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYLKPILGPIQERMKNASSQEEQL 61 Query: 413 ---KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + K + ++ L GC P+L+Q+P F AIY RH P L Sbjct: 62 AAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFAA------RHTPGISEATFLG- 114 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM---- 523 + I ++ + + Q + D+ Q + M Sbjct: 115 ----------------INLGSTSLILTVVAGILYYAQSLLMQVGMDEEQKKQMKTMALMN 158 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 P++ + PAG+ +YW + I+QQA+ + + ++ F Sbjct: 159 PIMIMMFSFGSPAGVTLYWVVGGLFGILQQAITN--FILKPRIRKQVEEEFKN 209 >gi|227547516|ref|ZP_03977565.1| inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212031|gb|EEI79927.1| inner membrane insertion protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 335 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 22/248 (8%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + F +M + ++ +AI++ + V+ FPL KQ S M Sbjct: 20 LTPVEWLQTWIMKIVHDFFVMLGVSPIGVSWVLAIIILVLVVQACIFPLFYKQMKSMRKM 79 Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + + PK+ ++ K+K Q + + +++LY+ ++ NP C P+L+Q PVF +++ Sbjct: 80 QALAPKMQRIQNKYKGKTDQASKEAMSREIMKLYQDNDANPAGSCLPMLIQGPVFMSMFY 139 Query: 446 VISISLEMR-HAPFWGWIKDLAAADPTNIFTLFGILPFY-------LPGFMHVGIWPIIM 497 +S + D+A A +FGI+ G +GI+ +M Sbjct: 140 TLSAIPYIANGKRDALGAFDVATAKQFTQTDVFGIVSVTDNFTSAAASGKAVIGIFVFLM 199 Query: 498 SLSMFIQM----KMSPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 ++ K + A Q +L PV+++F+ + P +++YW +NV Sbjct: 200 CFCLWFMQYFSMKRNMAAASMNKQTETMQKAMLWLFPVMYIFSGVAMPFAVLVYWLTNNV 259 Query: 548 ISIVQQAV 555 ++ + Sbjct: 260 CNLCRTLW 267 >gi|21356443|ref|NP_648417.1| CG6404, isoform B [Drosophila melanogaster] gi|24662345|ref|NP_729634.1| CG6404, isoform A [Drosophila melanogaster] gi|5052482|gb|AAD38571.1|AF145596_1 BcDNA.GH02220 [Drosophila melanogaster] gi|23093704|gb|AAF50127.2| CG6404, isoform A [Drosophila melanogaster] gi|23093705|gb|AAN11911.1| CG6404, isoform B [Drosophila melanogaster] gi|220943722|gb|ACL84404.1| CG6404-PA [synthetic construct] gi|220953572|gb|ACL89329.1| CG6404-PA [synthetic construct] Length = 441 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 88/232 (37%), Gaps = 39/232 (16%) Query: 340 YFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + + + I + T+ V+ + FPL ++A M N P++ Sbjct: 131 WSPVGMVQNCLEFLHCTWDIPWWGTIAIGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQM 190 Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVI 447 L+ K ++ + M+ + +NPL L Q P+F + ++ Sbjct: 191 LQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKNMVVPLAQAPLFISFFMGLRQMA 250 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504 + +E W DL ADP + P+I S ++++ Sbjct: 251 NAPVESMRDGGLFWFTDLTMADPFY-------------------LLPLITSATLYLTIEI 291 Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++S + +L +P+V +FPA ++ YW+ SN IS+ Q Sbjct: 292 GTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQ 342 >gi|224283948|ref|ZP_03647270.1| 60 kDa inner membrane insertion protein [Bifidobacterium bifidum NCIMB 41171] Length = 336 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 110/296 (37%), Gaps = 34/296 (11%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + L + F+ + + ++ +AI+ + V Sbjct: 8 LLDRGIWGWLYKLLTPLEWLMTQVMVLFHKFLTLLGMAPIGISWVLAIVFLVLVVHACIL 67 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWP 432 P+ KQ S M+ +QPK+ ++ K+K Q + + M++LY+ ++ NP+ CW Sbjct: 68 PIYLKQMKSMRKMQALQPKMQHIQNKYKGKKDQASKEAMSREMMKLYQDNDANPMGSCWT 127 Query: 433 ILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL---- 484 ++Q PVF ++ ++ I+ R A D A A +FG+ Sbjct: 128 AVIQGPVFMCMFYMLSAIPYIATGKRGA---LGAFDQATAKQFAQTRVFGVSVTDTFGTA 184 Query: 485 --PGFMHVGIWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALS 532 G + +G + ++M M+ + K Q + P++++F+ Sbjct: 185 NNSGKVVIGFFILLMCACMWYMQFNNMRKNLPKASMQGSTYKMQQAMTWGFPIMYIFSGI 244 Query: 533 SFPAGLIIYWSWSNVISIVQQAV-IMK------MHGAEIGLIDRLRSTFSKNYNSQ 581 FP +++YW +N ++ + + K E + D + + Q Sbjct: 245 MFPFAVLVYWLTNNACNLARSLFQVYKFPTPGSRAAEEKEIRDHRQENARRAKAGQ 300 >gi|303233448|ref|ZP_07320116.1| membrane protein insertase, YidC/Oxa1 family [Atopobium vaginae PB189-T1-4] gi|302480456|gb|EFL43548.1| membrane protein insertase, YidC/Oxa1 family [Atopobium vaginae PB189-T1-4] Length = 253 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 53/236 (22%), Positives = 115/236 (48%), Gaps = 17/236 (7%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + ++ G++G+A+++ T+ ++++ PL K S+A M+ +QP++ Sbjct: 1 MWDIFITLLTQVLEGIEQFCGDWGLAVIILTLIIRVILIPLMTKSTESSARMQALQPQMQ 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 +++K+ P + + M + Y H N L GC P++LQ+PVFF ++ V S + +A Sbjct: 61 AIKDKYSDDPA-RMNEEMQKFYSEHKFNMLGGCLPMVLQMPVFFGLFTVASKIPQ--NAS 117 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F+ + ++ + P ++F GI + F ++ +++ FI M M+ + Q Sbjct: 118 FFSLLPTISLS-PADVFQQQGIQTAAIYIF-----LVVLFAVTTFIPMVMNLKNTSEQQR 171 Query: 518 M----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV----IMKMHGAEIG 565 + M ++ + P +++Y++ S++ IVQQ + +MK E Sbjct: 172 SQTITMGVVMSCFMLWFGWTVPTAVLLYYNTSSLWQIVQQKLVTDRVMKRVKEETE 227 >gi|195127181|ref|XP_002008047.1| GI12049 [Drosophila mojavensis] gi|193919656|gb|EDW18523.1| GI12049 [Drosophila mojavensis] Length = 423 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 38/215 (17%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PP 408 + AI + T+ V+ L FPL ++A M N P++ L+ K ++ Sbjct: 117 WDIPWWGAIAIGTLCVRTLIFPLVILAQRNSAKMSNNMPQMQVLQLKMTEARQSGNAIES 176 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKD 464 + M+ + +NPL L Q P+F + ++ + +E W D Sbjct: 177 ARYAQEMMLFMREKGVNPLKNMIVPLAQAPLFISFFMGLRQMANTPVESMRDGGLFWFTD 236 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQA 517 L ADP + P+I S ++++ ++S + Sbjct: 237 LTLADPYY-------------------LLPVITSATLYLTIELGTDSARLSAANMNTM-K 276 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +L +P+V +FPA ++ YW+ SN IS+ Q Sbjct: 277 YVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQ 311 >gi|262066864|ref|ZP_06026476.1| stage III sporulation protein J [Fusobacterium periodonticum ATCC 33693] gi|291379415|gb|EFE86933.1| stage III sporulation protein J [Fusobacterium periodonticum ATCC 33693] Length = 206 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 23/209 (11%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 VGNFG++I++ T+ +K+ PL KQ S MK +QP+ID+++EK+ Q+L Sbjct: 18 NTDKYVGNFGVSIIIVTILIKIALLPLTLKQDKSMKEMKKLQPEIDKIKEKYANDK-QML 76 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 ++LYK H +NPL GC P+LLQ+P+ FA++ V+ + + + W+K L+ DP Sbjct: 77 NIKTMELYKEHKVNPLGGCLPLLLQLPILFALFGVLRSGI-IPADSSFLWLK-LSEPDPF 134 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-ILNWMPVVFVFA 530 I P++ F+Q K+ Q ++ P++ + Sbjct: 135 Y-------------------ILPVLNGAVSFLQQKLMGSADSNPQMKNMMYIFPIMMIMI 175 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 P+GL +YW S+++++VQQ IMK Sbjct: 176 SYKMPSGLQVYWLTSSILAVVQQYFIMKK 204 >gi|303240053|ref|ZP_07326574.1| membrane protein insertase, YidC/Oxa1 family [Acetivibrio cellulolyticus CD2] gi|302592322|gb|EFL62049.1| membrane protein insertase, YidC/Oxa1 family [Acetivibrio cellulolyticus CD2] Length = 285 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 50/265 (18%) Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + G +G+AI++ TVF+KL+ PL KQ+ S A ++ IQP I EL+ K+K + L + Sbjct: 22 HMSFGRYGLAIIIFTVFIKLVLLPLTVKQFKSNAQLQEIQPLIQELQRKYKNDNNK-LNE 80 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL--AAADPT 471 M+++Y H NP +GC P+L+Q+P+ F++ VI L I +L A + Sbjct: 81 EMMKVYAEHKYNPASGCLPLLVQLPILFSLIYVIGQPLTYMLNYSTADINNLLNAVPEAM 140 Query: 472 NIFTLF---------------------GILPFYLPGFMH---------VGIWPIIMSLSM 501 I + G++P + P + + + PI+ ++ Sbjct: 141 KIKGFYAQIGAVNFHNILNMKFLGLDLGLVPTWRPNVLFGPEMGRYLPLILIPILSVITT 200 Query: 502 FIQMKMSPPPADK-----------------GQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 F+ K+ K + P++ ++ FPAGL +YW Sbjct: 201 FLSNKLMTAATMKKNNNSSGNDSAQDAAAAMTKNMTLIAPIMTLWVSFQFPAGLGLYWLV 260 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDR 569 N+ I QQ + K + + D+ Sbjct: 261 GNIFQIFQQLYLNKYVINKKEVKDK 285 >gi|150019909|ref|YP_001312163.1| inner membrane protein translocase component YidC [Clostridium beijerinckii NCIMB 8052] gi|149906374|gb|ABR37207.1| 60 kDa inner membrane insertion protein [Clostridium beijerinckii NCIMB 8052] Length = 254 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 18/232 (7%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F+ ++++ F + F++ ++ ++ +AI + T+ +++L P K S+ Sbjct: 1 MFQAIVNFMKGIFDSLHDFIVSMGISDVGLSYVLAIFIFTLIIRILILPFNIKAAKSSQG 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ IQP++ +L+ K+K PQ L ++LYK +N++ GC P LL +P+ A+Y V Sbjct: 61 MQKIQPEVKKLQAKYKD-DPQKLNTETMRLYKENNVSVAGGCLPSLLPLPILMALYWVFM 119 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + A + WI DL A D I + L Y+P ++ K + Sbjct: 120 GIQGIEGAS-FLWIHDLFAPDKYYILPVLAALSTYIPS---------------YLMSKST 163 Query: 509 PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 P + M + +F + L++YW N+I +Q + Sbjct: 164 PSQPGGMNMGSMNLVMAGMMGVMSLNFKSILVLYWIIGNLIQTIQTYFLNYR 215 >gi|289550293|ref|YP_003471197.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] gi|315660247|ref|ZP_07913102.1| SpoJ family protein [Staphylococcus lugdunensis M23590] gi|289179825|gb|ADC87070.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] gi|315494674|gb|EFU83014.1| SpoJ family protein [Staphylococcus lugdunensis M23590] Length = 291 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 104/259 (40%), Gaps = 35/259 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ-- 393 ++ PM ++ + + + N +G+AI++ + ++++ P Y ++ M+ Sbjct: 32 FYNTFVDPMEKILHWLGSGIFNNDYGLAIIVLVLVIRIVLLPFMLSNYKNSHMMREKMKV 91 Query: 394 ------PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + M+Q+YK ++INP+A GC P+L+Q+P+ +Y Sbjct: 92 AKPEVSEVQEKVKRARTQEEKMAANQEMMQVYKKYDINPMASMLGCLPVLIQMPIVMGLY 151 Query: 445 KVISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ + + H P + W +L D I ++ + + Sbjct: 152 FVLRYQIGGGITHHPHFLWF-NLVKPD-----------------IWITAIAGVLYFIQSY 193 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG- 561 I K P + M++ P++ ++ A L +YWS S IVQ + Sbjct: 194 ISTKTMPDEQRQMAYMMMIVSPIMIIWISYQSAAALGLYWSVSAAFLIVQTYFANMYYSK 253 Query: 562 -AEIGLIDRLRSTFSKNYN 579 A+ + ++ + Sbjct: 254 RAKEEVAPMIKQYEKEKNQ 272 >gi|311065163|ref|YP_003971889.1| inner membrane insertion protein [Bifidobacterium bifidum PRL2010] gi|310867483|gb|ADP36852.1| Inner membrane insertion protein [Bifidobacterium bifidum PRL2010] Length = 309 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 105/263 (39%), Gaps = 34/263 (12%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + ++ +AI+ + V P+ KQ S M+ +QPK+ ++ K+K Q Sbjct: 14 LLGMAPIGISWVLAIVFLVLVVHACILPIYLKQMKSMRKMQALQPKMQHIQNKYKGKKDQ 73 Query: 410 V----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI----SISLEMRHAPFWGW 461 + + M++LY+ ++ NP+ CW ++Q PVF ++ ++ I+ R A Sbjct: 74 ASKEAMSREMMKLYQDNDANPMGSCWTAVIQGPVFMCMFYMLSAIPYIATGKRGA---LG 130 Query: 462 IKDLAAADPTNIFTLFGILPFYL------PGFMHVGIWPIIMSLSMFIQMKMSP------ 509 D A A +FG+ G + +G + ++M M+ + Sbjct: 131 AFDQATAKQFAQTRVFGVSVTDTFGTANNSGKVVIGFFILLMCACMWYMQFNNMRKNLPK 190 Query: 510 ----PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV-IMK------ 558 K Q + P++++F+ FP +++YW +N ++ + + K Sbjct: 191 ASMQGSTYKMQQAMTWGFPIMYIFSGIMFPFAVLVYWLTNNACNLARSLFQVYKFPTPGS 250 Query: 559 MHGAEIGLIDRLRSTFSKNYNSQ 581 E + D + + Q Sbjct: 251 RAAEEKEIRDHRQENARRAKAGQ 273 >gi|260834921|ref|XP_002612458.1| hypothetical protein BRAFLDRAFT_214259 [Branchiostoma floridae] gi|229297835|gb|EEN68467.1| hypothetical protein BRAFLDRAFT_214259 [Branchiostoma floridae] Length = 383 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 92/266 (34%), Gaps = 45/266 (16%) Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 + + P + G + I + + L + +I+ T+ Sbjct: 42 PTAHDIMQAAAETGVDPSLTE-LGLGGWSPICLLQSSIDMFHSTLHLPWWASIVCCTLLA 100 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV-------LQKAMIQLYKTHNI 424 + L FPL K + N+ N+ P+I ++ EK ++ + K H + Sbjct: 101 RSLMFPLIVKGQKNAINLNNVMPQIQKMNEKINEARTMGNKFEVAHQTAELQAFMKKHGV 160 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF----WGWIKDLAAADPTNIFTLFGIL 480 NPL L+Q+PVF + + + + W DL A+DP Sbjct: 161 NPLKNFLVPLVQMPVFISFFVGLRRMATLPIMSMATGGIFWFTDLTASDPYF-------- 212 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPADKGQAMILNWMPVVFVFALSSFP 535 I P++ S++M +++ P K ++ + ++ + +SFP Sbjct: 213 -----------ILPVMTSITMLTIIELGSELGVENPQMKMMKNVMRVVSLMILPLTASFP 261 Query: 536 ---------AGLIIYWSWSNVISIVQ 552 + YW SN +I Q Sbjct: 262 THSFPKVYCIAIFTYWMTSNTFTIAQ 287 >gi|322378154|ref|ZP_08052639.1| SpoIIIJ family protein [Streptococcus sp. M334] gi|321280884|gb|EFX57899.1| SpoIIIJ family protein [Streptococcus sp. M334] Length = 276 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 101/233 (43%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ D F+ F + F + + G+ I+L TV ++ L P+ + Q V++ M+ Sbjct: 31 DITADSADFWSKFVYFFAEIIRFLSFDISIGVGIILFTVLIRTLLLPVFQVQMVASRKMQ 90 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 91 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRHSDSLWPILIQMPVILALFQAL 150 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI L G + PI+ ++ F+ + Sbjct: 151 SR-VDFLKTGHFLWIN--------------------LGGVDTTLVLPILAAVFTFLSTWL 189 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P+G+ +YW+ SN ++Q + Sbjct: 190 SNKALSERNGATTAMMYGIPVLIFVFGVYAPSGVALYWAVSNAYQVLQTYFLN 242 >gi|301121274|ref|XP_002908364.1| mitochondrial inner membrane protein OXA1 [Phytophthora infestans T30-4] gi|262103395|gb|EEY61447.1| mitochondrial inner membrane protein OXA1 [Phytophthora infestans T30-4] Length = 371 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 36/251 (14%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANM 389 + Y ++ + ++ G I+ TTV V+ +FFP+ + A M Sbjct: 61 DFASVSDLGYSLSDMAIRSLDVIHSTTGLPWWATIIATTVAVRTVFFPVTVISMRNAAKM 120 Query: 390 KNIQPKIDELREKFKQSPPQ------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 K QP +++L+ + +P Q Q L K H++NP L QIPVF Sbjct: 121 KLFQPDMEKLKAQMDANPTQSPESTKEFQTKYKALMKKHDVNPFKSVLTPLSQIPVFLGF 180 Query: 444 YKVIS----ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 + + E H GW+ DL+ ADPT P+I S Sbjct: 181 FWGLQDISKYFPEYAHEG-IGWVPDLSVADPT-------------------LALPVISSA 220 Query: 500 SMFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 M +++ L + ++ V +F +G+ +YW SN+ ++ Q A+ Sbjct: 221 LMAASVELGGDAMGGDMQRNLKFGMRCFALMMVPLTMNFQSGIFVYWVTSNMFTLTQTAL 280 Query: 556 IMKMHGAEIGL 566 M+++ + L Sbjct: 281 -MRLNVVKRAL 290 >gi|297545654|ref|YP_003677956.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843429|gb|ADH61945.1| membrane protein insertase, YidC/Oxa1 family [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 206 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 23/220 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 IA + L+ + Y VGN+GIAI++ T+ +++L P +Q + MK IQP I E Sbjct: 1 MATIAMYLGELLEFIYKYVGNYGIAIIIFTILIRILLLPFYVQQMNTMKKMKEIQPLIQE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L++K+ + PQ L ++LY+ +NP GC P+LL + + + ++ ++ A Sbjct: 61 LQKKYAK-DPQKLNIETMKLYQEKKVNPFGGCLPMLLPLIILWPLFAMLRTYPAFSTAS- 118 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 + W+ LA DP I PI+ +++ +I M DK Q Sbjct: 119 FLWMHSLAERDPYY-------------------IIPILATVTTYISSAM--VATDKSQNS 157 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + M + + S PAG+ IYW SN+ IVQQ + M+ Sbjct: 158 MNIMMSIFIGWITVSLPAGIGIYWVTSNIFQIVQQYIFMR 197 >gi|293336635|ref|NP_001168896.1| hypothetical protein LOC100382702 [Zea mays] gi|223973535|gb|ACN30955.1| unknown [Zea mays] Length = 423 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 95/247 (38%), Gaps = 37/247 (14%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P F +A ++ + N+ + I LTT +++ PL Q +T Sbjct: 120 FPGEVAAAAADSFPPVAALQHIIDAIHTFTGLNWWVCIALTTFIIRIATVPLLVNQLKAT 179 Query: 387 ANMKNIQPKIDELREKF--KQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAI 443 ++ I P+++ ++++ +A ++ L+K H ++PL +L+Q P+F + Sbjct: 180 TKLRAINPEMEVIKDQMNSMDPKSVQEGQAKMKALFKKHGVSPLTPMKGLLIQGPIFMSF 239 Query: 444 YKVISISLEMRHAPFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 + IS +E P + W DL D I P++ Sbjct: 240 FFAISNMVE--KVPSFKGGGTLWFTDLTTPDSLY-------------------ILPMLTG 278 Query: 499 LSMFIQMKMS---PPPADKGQAMILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIV 551 L+ ++++ + + + V+ V +F + YW+ SN+ +++ Sbjct: 279 LTFLATVELNLQEGMEGNPMAGK-MKYFSRGVAVLTVPFTMNFATAVFCYWTSSNIFTLL 337 Query: 552 QQAVIMK 558 VI + Sbjct: 338 YGLVIRR 344 >gi|195493250|ref|XP_002094335.1| GE20254 [Drosophila yakuba] gi|194180436|gb|EDW94047.1| GE20254 [Drosophila yakuba] Length = 441 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 88/232 (37%), Gaps = 39/232 (16%) Query: 340 YFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + M + + + I + T+ V+ + FPL ++A M N P++ Sbjct: 131 WSPVGMVQNCMEFLHCTWDIPWWGTIAIGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQM 190 Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVI 447 L+ K ++ + M+ + +NPL L Q P+F + ++ Sbjct: 191 LQLKMTEARQSGNAIESARYAQEMMLFMREKGVNPLKNMVVPLAQAPLFISFFMGLRQMA 250 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ--- 504 + +E W DL ADP + P+I S ++++ Sbjct: 251 NAPVESMRDGGLFWFTDLTLADPFY-------------------LLPMITSATLYLTIEI 291 Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++S + +L +P+V +FPA ++ YW+ SN IS+ Q Sbjct: 292 GTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQ 342 >gi|313141100|ref|ZP_07803293.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] gi|313133610|gb|EFR51227.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] Length = 337 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 110/296 (37%), Gaps = 34/296 (11%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + L + F+ + + ++ +AI+ + V Sbjct: 9 LLDRGIWGWLYKLLTPLEWLMTQVMVLFHKFLTLLGMAPIGISWVLAIVFLVLVVHACIL 68 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWP 432 P+ KQ S M+ +QPK+ ++ K+K Q + + M++LY+ ++ NP+ CW Sbjct: 69 PIYLKQMKSMRKMQALQPKMQHIQNKYKGKKDQASKEAMSREMMKLYQDNDANPMGSCWT 128 Query: 433 ILLQIPVFFAIYKVI----SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL---- 484 ++Q PVF ++ ++ I+ R A D A A +FG+ Sbjct: 129 AVIQGPVFMCMFYMLSAIPYIATGKRGA---LGAFDQATAKQFAQTRVFGVSVTDTFGTA 185 Query: 485 --PGFMHVGIWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALS 532 G + +G + ++M M+ + K Q + P++++F+ Sbjct: 186 NNSGKVVIGFFILLMCACMWYMQFNNMRKNLPKASMQGSTYKMQQAMTWGFPIMYIFSGI 245 Query: 533 SFPAGLIIYWSWSNVISIVQQAV-IMK------MHGAEIGLIDRLRSTFSKNYNSQ 581 FP +++YW +N ++ + + K E + D + + Q Sbjct: 246 MFPFAVLVYWLTNNACNLARSLFQVYKFPTPGSRAAEEKEIRDHRQENARRAKAGQ 301 >gi|195589346|ref|XP_002084413.1| GD12846 [Drosophila simulans] gi|194196422|gb|EDX09998.1| GD12846 [Drosophila simulans] Length = 414 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 86/265 (32%), Gaps = 35/265 (13%) Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 + E + P + L P +++ G Sbjct: 75 SATKGEEFMQAVPKTELVDLPDIPAAPVPPPTDGLNVMDVMNAAGDPPSPPLAWAAGRRG 134 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 + I + + + K + M+ +Q K+ E R+ + M+ Sbjct: 135 HVRTIIFPLVILAQ----RNSAKMNNNMPQMQMLQLKMTEARQSGNAIESARYAQEMMLF 190 Query: 419 YKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 + +NPL L Q P+F + ++ + +E W DL ADP Sbjct: 191 MREKGVNPLKNMVVPLAQAPLFISFFMGLRQMANAPVESMRDGGLFWFTDLTMADPYY-- 248 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQAMILNWMPVVF 527 + P+I S ++++ ++S + +L +P+V Sbjct: 249 -----------------LLPLITSATLYLTIEIGTDSARLSAANMNTM-KYVLRALPIVI 290 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQ 552 +FPA ++ YW+ SN IS+ Q Sbjct: 291 FPFTMNFPAAILTYWACSNFISLGQ 315 >gi|328706364|ref|XP_001946799.2| PREDICTED: mitochondrial inner membrane protein OXA1L-like [Acyrthosiphon pisum] Length = 423 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 86/237 (36%), Gaps = 31/237 (13%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ-------SPPQVLQ 412 + AI+ T ++LL FPL TA M N P+I +EK + Sbjct: 145 WWGAIIAGTTILRLLVFPLVVTSQRHTARMNNNMPQIQAYQEKMTEARLHGNPYEMARAS 204 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF----WGWIKDLAAA 468 + ++ KT+ +NPL G +Q P+F +++ + + F W D+ Sbjct: 205 QELMLFMKTNQVNPLKGMILPAIQFPIFLSMFLGLRGMAMLPLESFKYGGLWWFTDITLP 264 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW----MP 524 D I + ++ + + I + S F L + +P Sbjct: 265 DQYFILPIVTVVTLGVTLELGADIGKLASSGVGF--------------GKYLKYGVRVLP 310 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +V + +FP + +YW+ +N IS+ Q + + + + S+ Sbjct: 311 LVVFPFIVNFPCAVCLYWASTNFISLGQVLFL--KIPSVRNYFNIEEKRIVEKPKSK 365 >gi|294790220|ref|ZP_06755378.1| membrane protein OxaA [Scardovia inopinata F0304] gi|294458117|gb|EFG26470.1| membrane protein OxaA [Scardovia inopinata F0304] Length = 330 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 17/198 (8%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 F A +Q + + K Q+ + + + ++LY+ ++ NP C P L Sbjct: 65 FIKQMVSMRNMQAMQPQLQKIQRKYKGKNDQASREAMSRETMKLYQENHANPAGSCLPAL 124 Query: 435 LQIPVFFAIYKVIS--ISLEMRHAPFWGWI-----KDLAAADPTNIFTLFGILPFYLPGF 487 LQ PVF A++ +S + G + A A NI G Sbjct: 125 LQSPVFMAMFYTLSAVTYIANGQRGPLGAFNKEVSTEFANAKVFNITLASMFNSEDTGGK 184 Query: 488 MHVGIWPIIMSLSMFIQMKMS---PPPADKGQ------AMILNW-MPVVFVFALSSFPAG 537 + +GI+ +M L+MF + P Q M +++ P++++F+ +FP Sbjct: 185 ITIGIFVALMCLTMFYSQWHNVRRNMPRTSMQGNSYRTQMAMSFIFPIMYIFSGITFPFA 244 Query: 538 LIIYWSWSNVISIVQQAV 555 +++YW +N+ ++ Q Sbjct: 245 VLVYWLTNNMWTLGQTFW 262 >gi|328956995|ref|YP_004374381.1| membrane protein OxaA [Carnobacterium sp. 17-4] gi|328673319|gb|AEB29365.1| membrane protein OxaA [Carnobacterium sp. 17-4] Length = 307 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 107/257 (41%), Gaps = 39/257 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + + +++ L G++G+AI++ T+ V+L+ PL Q + + Sbjct: 35 FIYEFLVVPTQQVIIQLAELLGGSYGLAIIVITLVVRLIILPLNLSQSKKSIIQQEKMAL 94 Query: 396 IDELREKFKQ--------SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 I E+ ++ Q+ ++ LYK +N++ L GC P+L+Q+P+F A+++ Sbjct: 95 IKPEMEEVQKKQKSAVTAEEKAAAQQELMSLYKDNNMSMLGGIGCLPLLIQMPIFTAMFQ 154 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I++S E+ ++ F G+ + D I F+Q Sbjct: 155 AINLSKEIGNSTFLGF----SLGDQN-------------------IALAIAAGAVYFVQS 191 Query: 506 KMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +S Q ++ P++ + + PAGL +YW + ++ Q + ++ Sbjct: 192 YVSMIGLPDEQKKQMRTMMYVSPIMILMVSFTSPAGLGLYWFVGGIFAVFQTLITNFIY- 250 Query: 562 AEIGLIDRLRSTFSKNY 578 + + ++ + K Sbjct: 251 -KPRIKAQVEAEAKKRP 266 >gi|74228374|dbj|BAE24033.1| unnamed protein product [Mus musculus] Length = 433 Score = 101 bits (250), Expect = 4e-19, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 87/231 (37%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ Y + +L + AI TV + L FPL K A + + P++ Sbjct: 113 SYTPVGLIQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHHHMPEMQ 172 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ Q + K H+I L L Q PVF + + + Sbjct: 173 KFSARIREAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREM 232 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + + P++++ +M+ ++ Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWCVLE 273 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 274 LGAETGVQSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|309798989|ref|ZP_07693246.1| membrane protein OxaA 2 [Streptococcus infantis SK1302] gi|308117393|gb|EFO54812.1| membrane protein OxaA 2 [Streptococcus infantis SK1302] Length = 308 Score = 101 bits (250), Expect = 4e-19, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 95/256 (37%), Gaps = 32/256 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--------FPLAKKQYVSTA 387 + W A + + + FG+ I++ T+ V+LL + A Sbjct: 36 FIWNTIGAPMAEAIKYFATDQGLGFGLGIIIVTIIVRLLILPLGIYQSWKATLHSEKMNA 95 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 ++P L+E Q Q+A+ K H I+ GC+PIL+Q+P F AIY Sbjct: 96 LKDVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILIQMPFFSAIYF 155 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + A + G +P P + V I+ L + + Sbjct: 156 AAQHTEGVAQASYLG-------------------IPLGSPSMILVAFAGILYYLQSLLSL 196 Query: 506 KMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + Q + +M P++ V PA + +YW + I+QQ +I + Sbjct: 197 HGVEDETQREQIKKMLYMSPLMIVVFSVFSPASVTLYWVVGGFMMILQQFIIN--YMVRP 254 Query: 565 GLIDRLRSTFSKNYNS 580 L ++R F+KN Sbjct: 255 HLRKKVREEFAKNPPK 270 >gi|302768040|ref|XP_002967440.1| hypothetical protein SELMODRAFT_408456 [Selaginella moellendorffii] gi|300165431|gb|EFJ32039.1| hypothetical protein SELMODRAFT_408456 [Selaginella moellendorffii] Length = 411 Score = 101 bits (250), Expect = 4e-19, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 34/248 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 F + A +++ + + ++I LTTV V+ + PL Q STA ++P Sbjct: 138 SESFPWTAAVQYVIYATHVVTGLPWWLSIALTTVAVRTMVLPLVIYQVKSTARFALLRPD 197 Query: 396 IDELREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +++++ +Q+ ++ M +L+ H +P LLQ P+F + + Sbjct: 198 LEKIKVDMEQANYDPVALAENKRKMAELFAKHKTDPFTPLIGALLQGPIFMCFFFGLRTM 257 Query: 451 LE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 E W DL D I P I + + I +++ Sbjct: 258 AEKMDSFKEGGAFWFTDLTTPDELF-------------------ILPFITTATFLITVEL 298 Query: 508 SP------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-MKMH 560 + P K IL M V+F+ + FP L YW SN+ S++Q A++ K Sbjct: 299 NAVDGMQGQPNQKTMKNILRGMGVLFLPLTAQFPKALFCYWVTSNLWSMLQGALLRNKKF 358 Query: 561 GAEIGLID 568 A + + D Sbjct: 359 KAYLDIPD 366 >gi|195376879|ref|XP_002047220.1| GJ13319 [Drosophila virilis] gi|194154378|gb|EDW69562.1| GJ13319 [Drosophila virilis] Length = 447 Score = 101 bits (250), Expect = 5e-19, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 106/309 (34%), Gaps = 40/309 (12%) Query: 263 FIPSKETSFHSQFKYLSDGHARY-QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 IP ++ +Y S + + + + + + + ++ Sbjct: 61 LIPLYSSAAAGGLRYASSKTDVPPNMESAKELVDLPAIPDAPIPPAIQNISTDPESLMET 120 Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 P F + GW M + + + I + T+ V+ L FPL Sbjct: 121 IDMAGEPTFASIGLGGWSPVGMVQNCMEFLHCTWDIP-WWGTIAIGTIVVRTLIFPLVIL 179 Query: 382 QYVSTANMKNIQPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPIL 434 ++A M N P++ L+ K ++ + M+ K +NPL L Sbjct: 180 AQRNSAKMSNNMPQMQVLQLKMTEARQSGNAIESARYAQEMMLFMKEKGVNPLKNMIVPL 239 Query: 435 LQIP----VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 Q P F + ++ + +E W DL ADP Sbjct: 240 AQAPLFLSFFMGLRQMANTPVESMRDGGLFWFTDLTLADPFY------------------ 281 Query: 491 GIWPIIMSLSMFIQ-------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 + P+I S ++++ ++S + +L +P+V +FPA ++ YW+ Sbjct: 282 -LLPVITSATLYLTIELGTDSARLSAANMNTM-KYVLRALPIVIFPFTMNFPAAILTYWA 339 Query: 544 WSNVISIVQ 552 SN IS+ Q Sbjct: 340 CSNFISLGQ 348 >gi|261338550|ref|ZP_05966434.1| membrane protein OxaA [Bifidobacterium gallicum DSM 20093] gi|270276572|gb|EFA22426.1| membrane protein OxaA [Bifidobacterium gallicum DSM 20093] Length = 337 Score = 100 bits (249), Expect = 5e-19, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 112/270 (41%), Gaps = 31/270 (11%) Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 + + + + F+ + ++ ++I+ + V+ Sbjct: 3 NQEFLLDGGFWGWLYKLLTPIEWLMTWIMNLFHEFLTFIGMPQVGASWVLSIIFLVLVVQ 62 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLA 428 FPL KQ S +M+ IQPK+ +++ K+K Q +Q+ M++LY+ +++NP Sbjct: 63 ACIFPLFYKQMKSMRHMQAIQPKMMKIQNKYKGKTDQASKDAMQREMMKLYQDNHVNPAG 122 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT-------------NIFT 475 C P+L+Q PVF ++ V+S + G L A D ++ T Sbjct: 123 SCLPMLIQGPVFMCMFYVLSAIPYI----AIGKRDTLGAFDQATAKQFADTHFFGISLQT 178 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPV 525 F + G + +G++ M ++ + + + Q ++L P+ Sbjct: 179 RFTDPSTMVGGKVVIGLFVAAMCFCLWFMQRYTMKHNTAAASMNKQTETMQKVMLWGFPI 238 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 +++F+ + P +++YW +N+ ++++ Sbjct: 239 MYIFSGIAMPFAVLVYWLTNNICNLLRSVW 268 >gi|306821796|ref|ZP_07455391.1| stage III sporulation protein J [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550163|gb|EFM38159.1| stage III sporulation protein J [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 260 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 29/238 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 I+ ++ +FYN+ N+ ++I+L T+ K++ PL Q S + MK IQP+ID+ Sbjct: 1 MSQISYFFGHILEFFYNMTSNYALSIVLFTILTKIILLPLTISQMRSMSAMKLIQPEIDK 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + +K+K Q + + +LYK +NINP AGC P+L+Q+P+ A+Y VI ++ A Sbjct: 61 INKKYKN-DRQKQSELLSKLYKDNNINPAAGCLPLLIQLPILTAMYSVIREPIKYVFANN 119 Query: 459 ----------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + W+K L D N+ G I P++ ++ ++Q+KMS Sbjct: 120 EALYKTADIGFFWVKHLTDVDKINV-----------GGMDLPFILPVMSAIFTYLQLKMS 168 Query: 509 PP-------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 A + MP++ + FPAGL++YW ++ I+QQ I K Sbjct: 169 TARSSSDNEMAQGMSKNMSVMMPIMMLIWGVMFPAGLMLYWVTGTIVQIIQQYFIGKY 226 >gi|297585523|ref|YP_003701303.1| YidC/Oxa1 family membrane protein insertase [Bacillus selenitireducens MLS10] gi|297143980|gb|ADI00738.1| membrane protein insertase, YidC/Oxa1 family [Bacillus selenitireducens MLS10] Length = 286 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 97/256 (37%), Gaps = 37/256 (14%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE- 398 Y I ++L + G++G +I++ TV ++ PL KQ + K +I Sbjct: 52 YVIYPFSYLLTFFADLFGGSYGASIIMMTVLIRTGLMPLMLKQQRTQLGTKKKMIEIQPE 111 Query: 399 -------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISI 449 ++K + Q +Q+ M+ +Y H NPL GC P+L+Q+P+ Y+ I Sbjct: 112 LEALKAKYKDKKEPEAQQEMQQEMMGIYTKHQFNPLTSMGCLPMLIQLPILIGFYQAIMR 171 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + E+ + W L D I PI+ +L FIQ ++S Sbjct: 172 TEEIASQ-QFLWFS-LGETD---------------------LILPILAALVYFIQFRISL 208 Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 ++ Q + PV+ A L +YW+ + I Q V M + Sbjct: 209 FGMEETQKKQMAVFGYLTPVMMGGFSFMVSAALPLYWTIGGLFLIAQTLVFKWMFREKNR 268 Query: 566 LIDRLRSTFSKNYNSQ 581 + + S+ Sbjct: 269 ELRERALMKKEAAPSE 284 >gi|148704412|gb|EDL36359.1| oxidase assembly 1-like, isoform CRA_c [Mus musculus] Length = 411 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 81/216 (37%), Gaps = 35/216 (16%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F L + AI TV + L FPL K A + N P++ + + +++ Q Sbjct: 106 FTELGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQ 165 Query: 413 KAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGW 461 + K H+I L L Q PVF + + + + W Sbjct: 166 AEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVPSLQTGGLWW 225 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----Q 516 +DL +DP + + P++++ +M+ +++ + Sbjct: 226 FQDLTVSDP-------------------IYVLPLVVTATMWCVLELGAETGVQSNDLQFM 266 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 267 RNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 302 >gi|148704413|gb|EDL36360.1| oxidase assembly 1-like, isoform CRA_d [Mus musculus] Length = 433 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ Y + +L + AI TV + L FPL K A + N P++ Sbjct: 113 SYTPVGLIQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQ 172 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ Q + K H+I L L Q PVF + + + Sbjct: 173 KFSARIREAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREM 232 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + + P++++ +M+ ++ Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWCVLE 273 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 274 LGAETGVQSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|26346514|dbj|BAC36908.1| unnamed protein product [Mus musculus] Length = 433 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ Y + +L + AI TV + L FPL K A + N P++ Sbjct: 113 SYTPVGLIQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQ 172 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ Q + K H+I L L Q PVF + + + Sbjct: 173 KFSARIREAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREM 232 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + + P++++ +M+ ++ Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWCVLE 273 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 274 LDAETGVQSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|58037139|ref|NP_081212.1| mitochondrial inner membrane protein OXA1L precursor [Mus musculus] gi|38372481|sp|Q8BGA9|OXA1L_MOUSE RecName: Full=Mitochondrial inner membrane protein OXA1L; AltName: Full=Oxidase assembly 1-like protein; Short=OXA1-like protein; Flags: Precursor gi|26336841|dbj|BAC32104.1| unnamed protein product [Mus musculus] gi|26342657|dbj|BAC34985.1| unnamed protein product [Mus musculus] Length = 433 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ Y + +L + AI TV + L FPL K A + N P++ Sbjct: 113 SYTPVGLIQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQ 172 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ Q + K H+I L L Q PVF + + + Sbjct: 173 KFSARIREAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREM 232 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + + P++++ +M+ ++ Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWCVLE 273 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 274 LGAETGVQSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|184155770|ref|YP_001844110.1| hypothetical protein LAF_1294 [Lactobacillus fermentum IFO 3956] gi|260663514|ref|ZP_05864404.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN] gi|183227114|dbj|BAG27630.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] gi|260552055|gb|EEX25108.1| inner membrane insertion protein [Lactobacillus fermentum 28-3-CHN] Length = 303 Score = 100 bits (248), Expect = 6e-19, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 102/257 (39%), Gaps = 41/257 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ++AKPM LM +F L GN +G AI+ V V+L+ PL Q + M+ + Sbjct: 36 YDYLAKPMQHLMEWFAGLFGNSYGWAIVALVVVVRLILLPLMMSQMKKSTMMQERMAMLQ 95 Query: 398 ELREKFKQSPPQVLQ--------KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 ++ Q +AM+ YK +N++ GC P+L+Q+PVF A+Y I Sbjct: 96 PQMRALQERQKQAKTPEEQAAASQAMMSFYKDNNVSLTGGIGCLPLLIQLPVFSALYFAI 155 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ A F+G L + I+ ++ IQ + Sbjct: 156 RYSPDLAQASFFG-----------------------LQLGQRSALLAIMAFVAYLIQGWL 192 Query: 508 SPPPADKGQAMIL----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 S + Q + P++ +F AGL +Y+ V +I+Q ++ Sbjct: 193 SMLGVPEDQKKQMRMALMMSPIMILFISWQASAGLGLYFFIGGVFAILQTWLVN---IYR 249 Query: 564 IGLIDRLRSTFSKNYNS 580 + ++ KN Sbjct: 250 PRIRKQIHEEMKKNPPK 266 >gi|226326925|ref|ZP_03802443.1| hypothetical protein PROPEN_00785 [Proteus penneri ATCC 35198] gi|225204762|gb|EEG87116.1| hypothetical protein PROPEN_00785 [Proteus penneri ATCC 35198] Length = 235 Score = 100 bits (248), Expect = 6e-19, Method: Composition-based stats. Identities = 33/247 (13%), Positives = 75/247 (30%), Gaps = 22/247 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + + Q P+ + Sbjct: 1 MDSQRNL-LFIALLFVSFLIWQQWEGDKVSQNTTTTAQVSQQADVPSSDSLAVTG----- 54 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + +K L IN +G D+ +L Y +++S +P L + + Y Sbjct: 55 --NSNEQAKLITVKTDVLDLRINTQGGTIDEADLLAYPAELNSTTPFRLL--ETTPQFLY 110 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN-----ANNILFERTISLD 175 A+ + + S V++ + + +L + I Sbjct: 111 QAQSGLIGPDGPDQK--SRPVYSADKNEFVLGENQDELRVPMTFVNEEGVKFIKTFILKK 168 Query: 176 EHYLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFIAVLGDKSLV 230 Y + + N + + + G++ + T ++ F + A Sbjct: 169 GQYDISVDYKIENTTDKTLTMNFYGQLKQSVKLPESRDTGSSNFALHTYRGAAYSSDETN 228 Query: 231 EQKYSDI 237 +K Sbjct: 229 YKKIQLW 235 >gi|323446883|gb|EGB02892.1| hypothetical protein AURANDRAFT_16967 [Aureococcus anophagefferens] Length = 196 Score = 100 bits (248), Expect = 7e-19, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 27/214 (12%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 ++ + +VG++G+AI+L T+ +K + FPL +Q ST M+ +QP I ++ K+ P Q Sbjct: 1 ITLIHGVVGSYGVAIVLFTLLLKAVTFPLNYQQIESTTKMQALQPAIKRIQAKYAADPQQ 60 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAA 468 + M +LY+ + +NPLAGC P L+QIP+F A+Y+ + + E + WI +L Sbjct: 61 MNIM-MAELYQENELNPLAGCLPALVQIPIFIALYRSLLSLAKEDLLEESFLWIPNLEGP 119 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK------GQAMILNW 522 + F + +Q PPAD +L + Sbjct: 120 -VYGAQNADWLFKFDHAS-------------TTLLQ-----PPADPNNEAAQTSNQVLKY 160 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +P++ F + PAGL IYW +N+I+ I Sbjct: 161 LPLMVGFFSLNVPAGLTIYWFCNNIITTASTLYI 194 >gi|168060995|ref|XP_001782477.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666030|gb|EDQ52696.1| predicted protein [Physcomitrella patens subsp. patens] Length = 419 Score = 100 bits (248), Expect = 7e-19, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 86/244 (35%), Gaps = 34/244 (13%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK- 395 A ++ + ++I TTV ++++ P+ Q +TA + ++P+ Sbjct: 162 DCSAPTAALQHLIDFVHTQGGLPWWLSIAATTVGIRVMVLPVLVWQMKATARLTLMRPEL 221 Query: 396 ---IDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + ++E + + ++ L+ HN NP +Q P+F + + I Sbjct: 222 ERITNTIKESGYDPKVTEVNQKRMKELFAQHNTNPFMPLMGAFVQAPLFISFFFAIRNMA 281 Query: 452 E---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-- 506 E W DL ADP I PI+ L ++ Sbjct: 282 ERVPSFKEGGALWFTDLTTADPYF-------------------ILPIMSGLFTLATIELG 322 Query: 507 -MSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 M + + V+ V +SFP L YW +NV S++Q V+ + Sbjct: 323 AMDGMQGQPMIGKMKMFFRGFAVLIVPLTASFPKALFCYWLTTNVCSLIQTTVL-RQPAV 381 Query: 563 EIGL 566 + L Sbjct: 382 KRTL 385 >gi|296875963|ref|ZP_06900022.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus parasanguinis ATCC 15912] gi|296433038|gb|EFH18826.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus parasanguinis ATCC 15912] Length = 305 Score = 100 bits (248), Expect = 7e-19, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 83/229 (36%), Gaps = 36/229 (15%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQL 418 ++ + + L + K + M ++P + ++E+ K + Q Q+ ++ Sbjct: 67 VTLIVRLIILPLGLYQSWKATYQSEKMNYLKPILGPIQERMKNASTQEEKLLAQQELMAA 126 Query: 419 YKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 + + ++ GC P+L+Q+P F A++ + + + Sbjct: 127 QRENGVSMFGGVGCLPLLIQMPFFSALFFAAQHTKGVAESS------------------- 167 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL----NWMPVVFVFAL 531 F + P + I ++ +IQ +S D+ Q + P++ Sbjct: 168 FLGIALGKPSLLLTAIVAVLY----YIQSMLSLHGIEDETQKESMRKASLMSPIMIGVFS 223 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 AG+ +YW VI I+QQ VI + L R+ + N Sbjct: 224 LISSAGVTLYWVVGGVIQIIQQFVIN--YLIRPNLRKRVAEEYKNNPPK 270 >gi|326383905|ref|ZP_08205589.1| putative inner membrane protein translocase component YidC [Gordonia neofelifaecis NRRL B-59395] gi|326197364|gb|EGD54554.1| putative inner membrane protein translocase component YidC [Gordonia neofelifaecis NRRL B-59395] Length = 384 Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 105/283 (37%), Gaps = 65/283 (22%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN------------FGIAIMLTTVFVKLLFFPLAKKQYVS 385 FI P+ +M ++ L + + ++++ ++ + + KQ + Sbjct: 1 MLNFIYYPVSWIMWVWHWLFDSVMPNSPGWDGIAWALSVVFLVFTLRAILYKPFVKQIRT 60 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 T M+ I P++ +R+K+ ++ + M +L K H NPL GC P+ +QIPVF ++ Sbjct: 61 TKQMQEINPQMQAIRKKYANDRVKM-TEEMQKLQKEHGFNPLLGCLPMFMQIPVFIGLFH 119 Query: 446 VI---------------------SISLEMRHAPFWGWIKD--------------LAAA-- 468 V+ + + R + + D L++ Sbjct: 120 VLRSFNRMGAGTSMPIGGSSSGGMTAEQTRETANYAFSADQVQNFLDARLFGVPLSSYIT 179 Query: 469 ---DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM-------KMSPPPADKGQAM 518 + F G + + + P+++ S+ M + S D Q Sbjct: 180 EPVEQFKAFVEPGQPIDFTRWQIAAVVIPLMIVASIATHMNSRASVARQSAEAMDNPQTR 239 Query: 519 IL-----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 I+ P+ + FP +++YW +N+ + QQ ++ Sbjct: 240 IMNKLALYVFPLGILVTGPFFPVAILLYWVSNNLWTYGQQHLV 282 >gi|302877173|ref|YP_003845806.1| membrane protein insertase, YidC/Oxa1 family [Clostridium cellulovorans 743B] gi|307687872|ref|ZP_07630318.1| putative inner membrane protein translocase component YidC [Clostridium cellulovorans 743B] gi|302580030|gb|ADL54042.1| membrane protein insertase, YidC/Oxa1 family [Clostridium cellulovorans 743B] Length = 224 Score = 100 bits (247), Expect = 9e-19, Method: Composition-based stats. Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 26/225 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + +L S NL + G++I++ ++F K+ FPL KQ S+ M+ IQP++ + Sbjct: 10 TTIFEWIVNLLDSGINNLNISVGLSIIVFSIFFKICLFPLNIKQIKSSFKMREIQPEVAK 69 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+ K+ +S PQ L +A +QLYK +P AGC P+LLQ PV A+Y V + E+ Sbjct: 70 LQAKY-KSDPQKLNQATMQLYKESGASPFAGCLPLLLQWPVLMAMYFVFKDA-EIIKGHS 127 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-KGQA 517 + W+ DL+A DP I P++ + + +I S A Sbjct: 128 FLWLTDLSARDPRY-------------------ILPVLTAATTYISTTYSTKQTQTAEAA 168 Query: 518 MILNWMPV----VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ M + + +F + + +++Y+ N+ Q +I K Sbjct: 169 KNMSTMTIVTTGMMLFMSLTLNSAVVMYYVIGNIFQFAQTYLIQK 213 >gi|322390080|ref|ZP_08063615.1| SpoIIIJ family protein [Streptococcus parasanguinis ATCC 903] gi|321143207|gb|EFX38650.1| SpoIIIJ family protein [Streptococcus parasanguinis ATCC 903] Length = 305 Score = 100 bits (247), Expect = 9e-19, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 84/229 (36%), Gaps = 36/229 (15%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQL 418 ++ + + L + K + M ++P + ++E+ K + Q Q+ ++ Sbjct: 67 VTLIVRLIILPLGLYQSWKATYQSEKMNYLKPILGPIQERMKNASTQEEKLLAQQELMAA 126 Query: 419 YKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 + + ++ GC P+L+Q+P F A++ + AD + Sbjct: 127 QRENGVSMFGGVGCLPLLIQMPFFSALFFAAQHTK--------------GVADSS----- 167 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL----NWMPVVFVFAL 531 F + P + I ++ +IQ +S D+ Q + P++ Sbjct: 168 FLGIALGKPSLLLTAIVAVLY----YIQSMLSLHGIEDETQKESMRKASLMSPIMIGVFS 223 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 AG+ +YW VI I+QQ VI + L R+ + N Sbjct: 224 LISSAGVTLYWVVGGVIQIIQQFVIN--YLIRPNLRKRVAEEYKNNPPK 270 >gi|168702122|ref|ZP_02734399.1| hypothetical protein GobsU_21520 [Gemmata obscuriglobus UQM 2246] Length = 845 Score = 100 bits (247), Expect = 9e-19, Method: Composition-based stats. Identities = 84/530 (15%), Positives = 175/530 (33%), Gaps = 97/530 (18%) Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF---ERTISLDE 176 + NN + T W ++S K + K F +T +L Sbjct: 216 FTVFHYPTPDDNNPDPLLGETNWTVVSEKRPADGPHEVVFEKELGEPYFVKIRKTYTLAR 275 Query: 177 HYLFKIVDTVTNN----SIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 + + + + ++ + + +A++G + Sbjct: 276 TDYHIGLHVGIEKLKVPGAAKGKGQLKYQLSGPRGLPIEGEWYTSTYRVAIVGWRERNGT 335 Query: 233 ---KYSDIEK-------SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF------- 275 +Y D + ++ ++++++AS + Sbjct: 336 LRRQYEDAASIGSKRGGEKARREDNTFHYMAVANQFFASAVAIDYSADEAKKTHPWSYVR 395 Query: 276 -----------KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH----- 319 + ++ I + PG+S F++ G + + Sbjct: 396 ATTELPLDKKQDPQMPNFDDITVRAASETIDLEPGQSTAHRYFIYNGPAKVGLLKLLPKV 455 Query: 320 ----------------------------HYEKDLAIPRFEMLIDWGWFYF-IAKPMFMLM 350 + D AI RF I W + M +L+ Sbjct: 456 EVNGQKVPAVREELVDQYKDTMMMSSITDFRSDTAIGRFASFIFWTDLVIAMTNLMHILL 515 Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVSTANMKNIQPKIDELREKFKQS 406 + ++++G++ ++I++ TV V+L+ ++ K +QP+ ++L+EK+K Sbjct: 516 AAIHSVLGHWALSIVMLTVCVRLVLMYPSRKQTAMSMKMMEVQKRLQPEFEKLQEKYKDD 575 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV-------ISISLEMRHAPFW 459 + +L + NP A LL FA V + S+ R + Sbjct: 576 FNT-YNREKTRLMMANGANPFAMAGGCLL----LFAQMPVMMGLYFCLQESIFFRLDS-F 629 Query: 460 GWIKDLAAADPTNIFT---LFGILPFYLPGFMHVG----IWPIIMSLSMFIQM-KMSPPP 511 WI +LAA D +T + P + F+++G + P++ M Q KM PP Sbjct: 630 LWIDNLAAPDMLKWWTEQIPYVSTPDDIGSFIYLGPYFNLLPLLAVGLMLFQQSKMMPPA 689 Query: 512 ADK---GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q M++ M ++ AGL +Y+ S +I+++ +I K Sbjct: 690 TDPQAEQQRMMMKLMMIMMAVFFYKVAAGLALYFIVSTAWAIIERQLIPK 739 >gi|227515638|ref|ZP_03945687.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus fermentum ATCC 14931] gi|227086068|gb|EEI21380.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus fermentum ATCC 14931] Length = 303 Score = 100 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 41/257 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ++AKPM LM +F L GN +G AI+ V V+L+ PL Q + M+ + Sbjct: 36 YDYLAKPMQHLMEWFAGLFGNSYGWAIVALVVVVRLILLPLMMSQMKKSTMMQERMAMLQ 95 Query: 398 ELREKFKQSPPQVLQ--------KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 ++ + +AM+ YK +N++ GC P+L+Q+PVF A+Y I Sbjct: 96 PQMRALQERQKRAKTPEEQAAASQAMMSFYKDNNVSLTGGIGCLPLLIQLPVFSALYFAI 155 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ A F+G L + I+ ++ IQ + Sbjct: 156 RYSPDLAQASFFG-----------------------LQLGQRSALLAIMAFVAYLIQGWL 192 Query: 508 SPPPADKGQAMIL----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 S + Q + P++ +F AGL +Y+ V +I+Q ++ Sbjct: 193 SMLGVPEDQKKQMRMALMMSPIMILFISWQASAGLGLYFFIGGVFAILQTWLVN---IYR 249 Query: 564 IGLIDRLRSTFSKNYNS 580 + ++ KN Sbjct: 250 PRIRKQIHEEMKKNPPK 266 >gi|227530490|ref|ZP_03960539.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus vaginalis ATCC 49540] gi|227349595|gb|EEJ39886.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus vaginalis ATCC 49540] Length = 322 Score = 100 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 35/253 (13%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + ++AKPM LM + +L N+G AI++ V V+ + P+ Q + M+ KI Sbjct: 35 TYTYLAKPMQHLMEWLASHLGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKMAKI 94 Query: 397 DEL--------REKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKV 446 L RE + M+ +Y+ +N++ GC P+L+Q PVF A+Y Sbjct: 95 QPLLKDLQKKQREAKTPEEQAAVGAQMMAVYRENNVSLTGGIGCLPLLIQFPVFAALYAA 154 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 I S ++ HA F G +A P+ +F + + + + ++ + P Sbjct: 155 IRYSPDLYHATFMG----IALGKPSILFAILSFVAYAVQSYLGLVGVP------------ 198 Query: 507 MSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 K Q + WM P + F + AGL +Y+ + +I+Q +I Sbjct: 199 ----EEQKKQMKMAIWMSPFMTFFISLTSSAGLGLYFFIGGLFAILQTLMIN---AYRPR 251 Query: 566 LIDRLRSTFSKNY 578 + ++ KN Sbjct: 252 IRRQIAEENKKNP 264 >gi|332686710|ref|YP_004456484.1| inner membrane protein translocase component YidC [Melissococcus plutonius ATCC 35311] gi|332370719|dbj|BAK21675.1| inner membrane protein translocase component YidC, OxaA protein [Melissococcus plutonius ATCC 35311] Length = 315 Score = 100 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 94/258 (36%), Gaps = 39/258 (15%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + M+ + N+G AI++ T+ V+++ PL Q + + Sbjct: 39 YNLLVQPMSNMITYLVNHFNWNYGWAIIVITIVVRIIILPLGLYQSHKSLVQSEKMQALK 98 Query: 398 ELREKFKQSPPQVLQKA--------MIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 + + + Q + M ++YK +N++ + GC P+L+Q+P+F A++ Sbjct: 99 PQLDIAQSNLKQAKTQEEQLNARADMQRVYKENNVSMVGGIGCLPLLIQMPIFSALFFAA 158 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + + A F + P + V + + +Q + Sbjct: 159 KYTKGITQA-------------------NFLGISLGKPSLVFVA----LAGAAYLLQGYL 195 Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 S + Q + M P++ VF S PAG+ +YW + + +Q + + Sbjct: 196 STIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQTFITNVLM--R 253 Query: 564 IGLIDRLRSTFSKNYNSQ 581 + ++ N Q Sbjct: 254 PKIKAKIEEDLKNNPPKQ 271 >gi|70725945|ref|YP_252859.1| lipoprotein [Staphylococcus haemolyticus JCSC1435] gi|82593013|sp|Q4L7X2|OXAA_STAHJ RecName: Full=Membrane protein oxaA; Flags: Precursor gi|68446669|dbj|BAE04253.1| lipoprotein precursor [Staphylococcus haemolyticus JCSC1435] Length = 291 Score = 100 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 105/260 (40%), Gaps = 35/260 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 ++ +PM ++ + + V N +GIAI++ + ++++ P Y ++ M+ Sbjct: 32 FYNTFVEPMSKVLHWLGHSVFNDDYGIAIIVLVLVIRIILLPFMLSNYKNSHLMREKMKV 91 Query: 396 --------IDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + M+++YK ++INP+ GC P+L+Q+PV +Y Sbjct: 92 AKPEVDGVQEKVKRARTQEEKMAANQEMMEVYKKYDINPMKSALGCLPVLIQMPVVMGLY 151 Query: 445 KVISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ + + P + W +L D I ++ + + Sbjct: 152 FVLRYRIGGGIAEHPHFLWF-NLIHPD-----------------IWITIIAGVLYFIQAW 193 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG- 561 + K P + M++ P++ ++ S + L +YWS S +VQ + Sbjct: 194 VSSKQMPQEQRQMTYMMMIVSPIMIIWISLSSASALGLYWSVSAAFLVVQTYFANMYYEK 253 Query: 562 -AEIGLIDRLRSTFSKNYNS 580 A+ + + N NS Sbjct: 254 VAQREVAPMIEKFKENNSNS 273 >gi|269216520|ref|ZP_06160374.1| inner membrane protein OxaA [Slackia exigua ATCC 700122] gi|269130049|gb|EEZ61131.1| inner membrane protein OxaA [Slackia exigua ATCC 700122] Length = 254 Score = 100 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 65/228 (28%), Positives = 118/228 (51%), Gaps = 14/228 (6%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +F + +FYN+VG++G+AI++ TV +++ P+ KQ S+ M+ +QP ++ Sbjct: 1 MWDAFKDLIFACVQFFYNIVGDWGLAIIIITVIFRIIVAPIMHKQSKSSYQMQKMQPLMN 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--SLEMRH 455 E++ KF P +Q+ M ++Y NPLAGC P+LLQ+P+F A+++ + S E Sbjct: 61 EIQTKFAD-DPTRMQEEMQKMYAETKFNPLAGCLPMLLQMPIFMAMFQTLRNIGSYEDTS 119 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 F+G + DL AA T G F+ I ++ +L+ F+ M + D Sbjct: 120 YTFYGLVPDLTAAPSTMFSQGIG-------AFIPYLILMLVFALATFMPMILQNIKNDSK 172 Query: 516 QAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q + M V+ ++ PAG++++W S++ I QQ + + Sbjct: 173 QRNQMLIMGVIMTVMMLWISWGSPAGVLLFWGVSSIFGIAQQQLTNRY 220 >gi|297243216|ref|ZP_06927151.1| preprotein translocase subunit YidC [Gardnerella vaginalis AMD] gi|296888750|gb|EFH27487.1| preprotein translocase subunit YidC [Gardnerella vaginalis AMD] Length = 337 Score = 100 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 107/256 (41%), Gaps = 21/256 (8%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + + + + + ++ +I+ + V F Sbjct: 8 ILDNGFLGWFYKILTPVEWLMTQIMSLFHKLLTLLGMNEIGFSWVFSIVFLVLVVHACIF 67 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWP 432 P K M+ I PK+ ++++K+K + +Q+ M++LY+ + NP C P Sbjct: 68 PAFIKSIKGMRKMQAIAPKVKKIQQKYKGKNDPASKEAMQREMMKLYQDNKANPAGSCLP 127 Query: 433 ILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGI------LPFYLP 485 +++Q P F +I+ +S+ R D+A A +FG+ + Sbjct: 128 MMIQGPAFMSIWYTLSVIPFIARGKHAALGAFDIATAQQFVKTRVFGVGVADTFMTTAGA 187 Query: 486 GFMHVGIWPIIMSLSMFIQM----KMSPPPADKG------QAMILNWMPVVFVFALSSFP 535 G + + I+ ++M +M+ + + PP K Q +++ P+++VF+ + P Sbjct: 188 GKIVIVIFVVLMCAAMWYMQFNNIRKNLPPESKQGSQYTVQKLMMWGFPLIYVFSAFAMP 247 Query: 536 AGLIIYWSWSNVISIV 551 +++YW +NVI+++ Sbjct: 248 FAMLVYWLVNNVINML 263 >gi|74178496|dbj|BAE32503.1| unnamed protein product [Mus musculus] gi|74181916|dbj|BAE32657.1| unnamed protein product [Mus musculus] Length = 433 Score = 99.7 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ Y + +L + AI TV + L FPL K A + N P++ Sbjct: 113 SYTPVGLIQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQ 172 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ Q + K H+I L L Q PVF + + + Sbjct: 173 KFSARIREAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREM 232 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + + P++++ +M+ ++ Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWCVLE 273 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 274 LGAETGVQSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|258614348|ref|ZP_05712118.1| integral membrane protein [Enterococcus faecium DO] Length = 222 Score = 99.7 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 78/209 (37%), Gaps = 31/209 (14%) Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQ 436 + A ++ +L+ + Q M Q+Y+ + ++ GC P+L+Q Sbjct: 1 MIQSEKMQALKPQVEAAQQKLKAATTREEQMAAQAEMQQVYRENGLSMTGGIGCLPLLIQ 60 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 +P+F A+Y + +R + F+G DL + + I Sbjct: 61 MPIFSALYFTARYTEGIRESSFYG--IDLGSP---------------------SMVLVAI 97 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ +Q +S + Q + M P + VF S PAG+ +YW V S +Q Sbjct: 98 AGVAYLLQGYISTIGIPEEQKKTMRTMLIVSPAMIVFMSISAPAGVTLYWVVGGVFSCLQ 157 Query: 553 QAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + M + L ++ +N Q Sbjct: 158 TFITNVMM--KPRLKAQVAEELKQNPPKQ 184 >gi|20073181|gb|AAH27191.1| Oxa1l protein [Mus musculus] Length = 411 Score = 99.7 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 81/216 (37%), Gaps = 35/216 (16%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 F L + AI TV + L FPL K A + N P++ + + +++ Q Sbjct: 106 FTELGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQ 165 Query: 413 KAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGW 461 + K H+I L L Q PVF + + + + W Sbjct: 166 AEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVPSLQTGGLWW 225 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----Q 516 +DL +DP + + P++++ +M+ +++ + Sbjct: 226 FQDLTVSDP-------------------IYVLPLVVTATMWCVLELGAETGVQSNDLQFM 266 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 267 RNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 302 >gi|257785164|ref|YP_003180381.1| 60 kDa inner membrane insertion protein [Atopobium parvulum DSM 20469] gi|257473671|gb|ACV51790.1| 60 kDa inner membrane insertion protein [Atopobium parvulum DSM 20469] Length = 252 Score = 99.7 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 121/246 (49%), Gaps = 17/246 (6%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +I ++ +++ + G++G+A++L T+ ++++ P+ KQ S A M +QPK+ Sbjct: 1 MWDWIVNFLYTVLAGLQSFSGDWGMAVILLTIIIRIILVPMTNKQTASMARMSVVQPKLK 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-SISLEMRHA 456 E++E++ P + M +LY N NPL GC P+LLQ P+F A++ V + ++ R Sbjct: 61 EIQERYADDPV-RQNEEMRKLYAEINFNPLGGCLPLLLQSPIFIALFTVAKMVPVDSR-- 117 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPAD 513 + I A ++IFT+ G + + I+ ++ L+ F+ M ++ Sbjct: 118 --FYGILPSIARTTSDIFTVDGFV-----SAIPYMIFVLLFGLTTFLSMAVNARTSSGEQ 170 Query: 514 KGQAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + Q ++ M ++ ++ + PA +++Y+ S V + QQ +I K L + Sbjct: 171 RTQQYMMGGIMTLMMLWFGWTVPAAVLLYYVTSGVWQLAQQQLITKRIMEREKLKA--EA 228 Query: 573 TFSKNY 578 + Sbjct: 229 QMANKP 234 >gi|551760|gb|AAA73145.1| inner membrane protein [Buchnera aphidicola] Length = 273 Score = 99.7 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 84/291 (28%), Gaps = 33/291 (11%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 ME N+F+ L + WQ + + NE N Sbjct: 1 MELQRNFFIFAFL-FVSFLLWQAWQSQSLKKNKKNEETNS-----------------FFH 42 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 ++ +KN L IN+ G ++ +L Y ++S + L + + Y Sbjct: 43 LNHKKEDKNQIIIKNDVLRLVINMYGGDIEEASLLDYKTQLNSPENLKLL--ETKSDFVY 100 Query: 121 FAELDYVSTAN-NIELPNSNTVWNLISGKILTPTTPIKLVFK-----NANNILFERTISL 174 A+ + + + +++ +L + I Sbjct: 101 QAQSGLIGKDGLDNSINKIRPLYSAKKNFFELGHNEKELRVPITFIAKNGITYIKNFILK 160 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-------KPQTATNTFGVQEGFIAVLGDK 227 Y ++ + N S ++ + G++ + + G D Sbjct: 161 PGKYNVEVEYDINNLSNKKLELNIFGQLKQTVKLPKNRDIYSGNFALQTFRGAAYSSSDA 220 Query: 228 SLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYL 278 + K+ +I + + W+ + +Y+ ++P S + Sbjct: 221 KYEKYKFDNIANHEHLHIITHHGWIAMLQQYFVVAWVPDTNISSSNIIYTS 271 >gi|120407004|ref|YP_956833.1| putative inner membrane protein translocase component YidC [Mycobacterium vanbaalenii PYR-1] gi|119959822|gb|ABM16827.1| 60 kDa inner membrane insertion protein [Mycobacterium vanbaalenii PYR-1] Length = 374 Score = 99.7 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 94/238 (39%), Gaps = 39/238 (16%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + +++M ++ + + +Q +T M+ +QP+I L++K+ Q + M Sbjct: 42 FFAWALSVMFLVFTLRAILYKPFVRQIRTTRQMQELQPQIKALQKKY-GKDRQRMALEMQ 100 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS--------------LEMRHAP-FWGW 461 +L + H NP+ GC P+L QIPVF +Y V+ E R P ++ Sbjct: 101 KLQREHGFNPILGCLPMLAQIPVFLGLYHVLMSFNRTQTGIGRLGLSVEENRSLPNYFFS 160 Query: 462 IKDLAAADPTNIFT------------LFGILPFYLPGFMHVGIWPIIM-SLSMFIQMK-- 506 D+ N+F L F + VG+ +IM ++ + + Sbjct: 161 ATDVGHFLDANLFGAPLGATMIQQHGLDAFTEFNRLSVIVVGVPIMIMAGIATYFNSRAS 220 Query: 507 ---MSPPPADKGQAMIL-----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 SP A Q ++ P+ V P +I+YW +N+ + QQ + Sbjct: 221 VARQSPEAAANPQTAMMNKLALYVFPLGVVVGGPFLPLAIILYWFANNIWTFGQQHYV 278 >gi|307709883|ref|ZP_07646331.1| membrane protein oxaA 1 [Streptococcus mitis SK564] gi|307619373|gb|EFN98501.1| membrane protein oxaA 1 [Streptococcus mitis SK564] Length = 274 Score = 99.7 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 101/233 (43%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F+ F + F + + G+ I+L TV ++ L P+ + Q V++ M+ Sbjct: 29 DITANSADFWSKFVYFFAEIIRFLSFDISIGVGIILFTVLIRTLLLPVFQVQMVASRKMQ 88 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 89 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI L G + PI+ ++ F+ + Sbjct: 149 SR-VDFLKTGHFLWIN--------------------LGGVDTTLVLPILAAVFTFLSTWL 187 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P+G+ +YW+ SN ++Q + Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFGVYAPSGVALYWAVSNAYQVLQTYFLN 240 >gi|256617039|ref|ZP_05473885.1| inner membrane protein [Enterococcus faecalis ATCC 4200] gi|307277162|ref|ZP_07558266.1| putative OxaA-like protein [Enterococcus faecalis TX2134] gi|256596566|gb|EEU15742.1| inner membrane protein [Enterococcus faecalis ATCC 4200] gi|306506092|gb|EFM75258.1| putative OxaA-like protein [Enterococcus faecalis TX2134] Length = 310 Score = 99.7 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + + + N N+G AI+ T+ V+++ PL Q + Sbjct: 37 FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96 Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 I +++ + Q + ++YK +N++ + GC P+L+Q+P+F +++ Sbjct: 97 IKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + A F G +L + I + L+ Q Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193 Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +S + Q + M P++ VF S PAG+ +YW + + +Q A+ Sbjct: 194 YISMIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 + +++ N Q Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271 >gi|157149880|ref|YP_001449837.1| OxaA-like protein precursor [Streptococcus gordonii str. Challis substr. CH1] gi|157074674|gb|ABV09357.1| Membrane protein oxaA 2 precursor [Streptococcus gordonii str. Challis substr. CH1] Length = 310 Score = 99.7 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 99/261 (37%), Gaps = 39/261 (14%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF----PLAKKQYVSTANM 389 + + + +A ++ + +L FG+AI+L TV V+L+ + + Sbjct: 35 QGFVYQFLVAPMSQVIKYFASDLGLGFGLAIILVTVIVRLIILPLGLYQSWNATYQSEKR 94 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPL--AGCWPILLQIPVFFAI 443 + P + E+ K + Q + A Q K + I+ L GC P+L+Q+P F A+ Sbjct: 95 NYLSPIFTPINERMKNAETQEEKLAAQQALMAAQKENGISMLGGVGCLPLLIQMPFFSAL 154 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + + + + F + I +++ + +I Sbjct: 155 FYAARYTKGIAESS-------------------FLGINLGQQSM----ILIVVVGVLYYI 191 Query: 504 QMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q +S D+ Q + M P++ V + PAG+ +YW + I+QQ +I Sbjct: 192 QSLLSLVGLDEEQKEQMKKMIYVSPLMIVIFSLTAPAGVTLYWVVGGFVQILQQFIIN-- 249 Query: 560 HGAEIGLIDRLRSTFSKNYNS 580 + R+ + KN Sbjct: 250 FFIRPYMKKRVAEEYEKNPPK 270 >gi|217928118|gb|ACK57254.1| CG6404-like protein [Drosophila affinis] Length = 305 Score = 99.7 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 85/211 (40%), Gaps = 38/211 (18%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQ 412 + AI + T+ V+ + FPL ++A M N P++ L+ K ++ Sbjct: 111 WWGAIAVGTLAVRTIIFPLVILAQRNSAKMNNNMPQMQLLQLKMTEARQSGNAIESARYA 170 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468 + M+ + +NPL L Q P+F + ++ + ++ W +DL A Sbjct: 171 QEMMLFMRDKGVNPLKNMIVPLAQAPLFISFFMGLRQMANTPVDSMRDGGLWWFQDLTLA 230 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQAMILN 521 DP I P+I S ++++ ++S + +L Sbjct: 231 DPFY-------------------ILPLITSATLYLTIEIGTDSARLSAANMNTM-KYVLR 270 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +P+V +FPA ++ YW+ SN IS+ Q Sbjct: 271 ALPLVIFPFTMNFPAAILTYWACSNFISLGQ 301 >gi|297588064|ref|ZP_06946708.1| YidC/Oxa1 family membrane protein insertase [Finegoldia magna ATCC 53516] gi|297574753|gb|EFH93473.1| YidC/Oxa1 family membrane protein insertase [Finegoldia magna ATCC 53516] Length = 221 Score = 99.7 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 42/236 (17%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + F I+I+L T+ KL+ P+ + +QP+I E++ K+K PQ Q M Sbjct: 7 ISYFAISILLLTLIYKLITLPVTIHTQKTQEQNALMQPEIKEIQRKYKN-DPQTQQLKMQ 65 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---------ISLEMRHAPFWGWIKDLAA 467 +LYK +N NPL+GC PI+LQ+ + A+++V+ ++ A + WI DL Sbjct: 66 ELYKKYNFNPLSGCLPIILQMVLVLALFRVMREPGKYMFDNVAKINEIARNFFWIPDLTK 125 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-------KGQAMIL 520 DP LFG P+I + + F+ K+S P + Q ++ Sbjct: 126 PDPV----LFG--------------LPLINAFTQFLVAKISMPTNNKDKKSNEPDQMEMM 167 Query: 521 -----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 +MP+ F S + +GLI+YW +SNV+ ++ + +I + + + + +R Sbjct: 168 NKSMIYFMPIFMFFISSKYASGLILYWGFSNVLEVIIRLII--KNKDKKDVAEEVR 221 >gi|315611871|ref|ZP_07886790.1| SpoIIIJ family protein [Streptococcus sanguinis ATCC 49296] gi|315316049|gb|EFU64082.1| SpoIIIJ family protein [Streptococcus sanguinis ATCC 49296] Length = 312 Score = 99.3 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 79/209 (37%), Gaps = 24/209 (11%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ L GC+P Sbjct: 86 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMLGGVGCFP 145 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+Q+P F AIY + + A + G +P P + V Sbjct: 146 ILIQMPFFSAIYFAAQHTDGVAQASYLG-------------------IPLGSPSMILVAC 186 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ L + + + Q + +M P++ VF PA + +YW + I+ Sbjct: 187 AGVLYYLQSLLSLHGVEDEMQREQLKKMIYMSPLMIVFFSFFAPASVTLYWVVGGFMMIL 246 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 QQ ++ + L ++R F+KN Sbjct: 247 QQFIVN--YVVRPKLRKKVREEFAKNPPK 273 >gi|160932432|ref|ZP_02079822.1| hypothetical protein CLOLEP_01267 [Clostridium leptum DSM 753] gi|156868391|gb|EDO61763.1| hypothetical protein CLOLEP_01267 [Clostridium leptum DSM 753] Length = 352 Score = 99.3 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 111/275 (40%), Gaps = 54/275 (19%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 F +I L+ +FY N+G++I+L T+ +K++ FP + KQ S A +Q K Sbjct: 1 MQIFSWIGNVFGYLLWFFYEFTKNYGVSIILFTIVLKIIMFPFSIKQQKSMAKNTRLQGK 60 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW----PILLQIPVFFAIYKVISISL 451 E+++K+ + Q + + M +LY+ +NP+ GC P+++ + +++++ + +L Sbjct: 61 QKEIQKKYGDNK-QKMSEEMQKLYQQEGVNPMGGCLTSIIPLIIMMGIYYSVVNPLQNTL 119 Query: 452 EMRHA-------------------PFWGWIKDL--------------AAADPTNI----- 473 + + + DL +A + NI Sbjct: 120 HIAGSKVTEAMQLLQQVPGVGNLFSGFYGEIDLVKHFDFFKDFLPMFSADEAANIASFGQ 179 Query: 474 -FTLFGILPFYLP----GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM------ILNW 522 F G+ P + + P++ +S + + P AM ++ Sbjct: 180 GFNFLGLNLLDTPQSSSFSSMLWLIPVLCLVSSLVTQWLMPKITGNQMAMQGCMKWMMFI 239 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +P+ + + PA + YW + V+ +Q V+ Sbjct: 240 LPLFSAWIAYTVPAAVGFYWIINTVLQFLQTWVLN 274 >gi|257421952|ref|ZP_05598942.1| integral membrane protein [Enterococcus faecalis X98] gi|257163776|gb|EEU93736.1| integral membrane protein [Enterococcus faecalis X98] Length = 309 Score = 99.3 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + + + N N+G AI+ T+ V+++ PL Q + Sbjct: 37 FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96 Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 I +++ + Q + ++YK +N++ + GC P+L+Q+P+F +++ Sbjct: 97 IKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + A F G +L + I + L+ Q Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193 Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +S + Q + M P++ VF S PAG+ +YW + + +Q A+ Sbjct: 194 YISMIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 + +++ N Q Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271 >gi|229545175|ref|ZP_04433900.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis TX1322] gi|229309720|gb|EEN75707.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis TX1322] Length = 310 Score = 99.3 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + + + N N+G AI+ T+ V+++ PL Q + Sbjct: 37 FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96 Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 I +++ + Q + ++YK +N++ + GC P+L+Q+P+F +++ Sbjct: 97 IKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + A F G +L + I + L+ Q Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193 Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +S + Q + M P++ VF S PAG+ +YW + + +Q A+ Sbjct: 194 YISMIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 + +++ N Q Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271 >gi|312905127|ref|ZP_07764248.1| putative OxaA-like protein [Enterococcus faecalis TX0635] gi|310631517|gb|EFQ14800.1| putative OxaA-like protein [Enterococcus faecalis TX0635] Length = 310 Score = 99.3 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + + + N N+G AI+ T+ V+++ PL Q + Sbjct: 37 FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96 Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 I +++ + Q + ++YK +N++ + GC P+L+Q+P+F +++ Sbjct: 97 IKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + A F G +L + I + L+ Q Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193 Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +S + Q + M P++ VF S PAG+ +YW + + +Q A+ Sbjct: 194 YISMIGIPEEQKKTMKSMLIVPPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 + +++ N Q Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271 >gi|304404107|ref|ZP_07385769.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus curdlanolyticus YK9] gi|304347085|gb|EFM12917.1| membrane protein insertase, YidC/Oxa1 family [Paenibacillus curdlanolyticus YK9] Length = 280 Score = 99.3 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 31/242 (12%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + ++I P ++ + G++G++I++ T+ V+L+ PL +Q M Sbjct: 39 DSSTPGTFNHYIVYPFSAVIQHVATWFDGSYGLSIIVITLLVRLILMPLMIRQQTGQLAM 98 Query: 390 KNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVF 440 + + + K + LQ+ +QLY+ H +NPL GC P+L+Q+P+ Sbjct: 99 RAKMKTLTPELNAVKEKYKSKKDAESQRKLQQETMQLYQQHGVNPLAIGCLPLLIQLPIL 158 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y I ++ E++ + W K L +ADP I+PF G + Sbjct: 159 TGLYYAIRMTPELK-THAFLWFK-LGSADP--------IMPFIAAGVYLIQ--------- 199 Query: 501 MFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F+ ++S K AM++ P++ + PA L +YW+ V I Q + + Sbjct: 200 SFVSQRLSGSDASQQKQMAMLMYLSPIMMGLFSFTAPAALPLYWAVGGVFMIGQSWLAYR 259 Query: 559 MH 560 ++ Sbjct: 260 LY 261 >gi|227553936|ref|ZP_03983983.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis HH22] gi|229549423|ref|ZP_04438148.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis ATCC 29200] gi|255972127|ref|ZP_05422713.1| inner membrane protein [Enterococcus faecalis T1] gi|255975194|ref|ZP_05425780.1| inner membrane protein [Enterococcus faecalis T2] gi|256763098|ref|ZP_05503678.1| inner membrane protein [Enterococcus faecalis T3] gi|256853765|ref|ZP_05559130.1| inner membrane protein [Enterococcus faecalis T8] gi|256956682|ref|ZP_05560853.1| inner membrane protein [Enterococcus faecalis DS5] gi|256961301|ref|ZP_05565472.1| inner membrane protein [Enterococcus faecalis Merz96] gi|256963572|ref|ZP_05567743.1| inner membrane protein [Enterococcus faecalis HIP11704] gi|257079637|ref|ZP_05573998.1| inner membrane protein [Enterococcus faecalis JH1] gi|257082017|ref|ZP_05576378.1| inner membrane protein [Enterococcus faecalis E1Sol] gi|257084568|ref|ZP_05578929.1| inner membrane protein [Enterococcus faecalis Fly1] gi|257087436|ref|ZP_05581797.1| inner membrane protein [Enterococcus faecalis D6] gi|257090596|ref|ZP_05584957.1| inner membrane protein [Enterococcus faecalis CH188] gi|257416643|ref|ZP_05593637.1| inner membrane protein [Enterococcus faecalis AR01/DG] gi|257419859|ref|ZP_05596853.1| inner-membrane protein [Enterococcus faecalis T11] gi|293383585|ref|ZP_06629495.1| SpoJ protein [Enterococcus faecalis R712] gi|294780917|ref|ZP_06746271.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis PC1.1] gi|300860707|ref|ZP_07106794.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis TUSoD Ef11] gi|307270839|ref|ZP_07552126.1| putative OxaA-like protein [Enterococcus faecalis TX4248] gi|307271511|ref|ZP_07552783.1| putative OxaA-like protein [Enterococcus faecalis TX0855] gi|307285813|ref|ZP_07565947.1| putative OxaA-like protein [Enterococcus faecalis TX0860] gi|307287716|ref|ZP_07567759.1| putative OxaA-like protein [Enterococcus faecalis TX0109] gi|307290544|ref|ZP_07570456.1| putative OxaA-like protein [Enterococcus faecalis TX0411] gi|312899834|ref|ZP_07759153.1| putative OxaA-like protein [Enterococcus faecalis TX0470] gi|312906136|ref|ZP_07765148.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 512] gi|312909481|ref|ZP_07768336.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 516] gi|312953484|ref|ZP_07772324.1| putative OxaA-like protein [Enterococcus faecalis TX0102] gi|227176922|gb|EEI57894.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis HH22] gi|229305660|gb|EEN71656.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis ATCC 29200] gi|255963145|gb|EET95621.1| inner membrane protein [Enterococcus faecalis T1] gi|255968066|gb|EET98688.1| inner membrane protein [Enterococcus faecalis T2] gi|256684349|gb|EEU24044.1| inner membrane protein [Enterococcus faecalis T3] gi|256710708|gb|EEU25751.1| inner membrane protein [Enterococcus faecalis T8] gi|256947178|gb|EEU63810.1| inner membrane protein [Enterococcus faecalis DS5] gi|256951797|gb|EEU68429.1| inner membrane protein [Enterococcus faecalis Merz96] gi|256954068|gb|EEU70700.1| inner membrane protein [Enterococcus faecalis HIP11704] gi|256987667|gb|EEU74969.1| inner membrane protein [Enterococcus faecalis JH1] gi|256990047|gb|EEU77349.1| inner membrane protein [Enterococcus faecalis E1Sol] gi|256992598|gb|EEU79900.1| inner membrane protein [Enterococcus faecalis Fly1] gi|256995466|gb|EEU82768.1| inner membrane protein [Enterococcus faecalis D6] gi|256999408|gb|EEU85928.1| inner membrane protein [Enterococcus faecalis CH188] gi|257158471|gb|EEU88431.1| inner membrane protein [Enterococcus faecalis ARO1/DG] gi|257161687|gb|EEU91647.1| inner-membrane protein [Enterococcus faecalis T11] gi|291079097|gb|EFE16461.1| SpoJ protein [Enterococcus faecalis R712] gi|294452043|gb|EFG20491.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis PC1.1] gi|300849746|gb|EFK77496.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis TUSoD Ef11] gi|306498399|gb|EFM67904.1| putative OxaA-like protein [Enterococcus faecalis TX0411] gi|306501454|gb|EFM70757.1| putative OxaA-like protein [Enterococcus faecalis TX0109] gi|306502574|gb|EFM71841.1| putative OxaA-like protein [Enterococcus faecalis TX0860] gi|306511783|gb|EFM80781.1| putative OxaA-like protein [Enterococcus faecalis TX0855] gi|306512752|gb|EFM81397.1| putative OxaA-like protein [Enterococcus faecalis TX4248] gi|310627782|gb|EFQ11065.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 512] gi|310628693|gb|EFQ11976.1| putative OxaA-like protein [Enterococcus faecalis TX0102] gi|311290154|gb|EFQ68710.1| putative OxaA-like protein [Enterococcus faecalis DAPTO 516] gi|311293084|gb|EFQ71640.1| putative OxaA-like protein [Enterococcus faecalis TX0470] gi|315025408|gb|EFT37340.1| putative OxaA-like protein [Enterococcus faecalis TX2137] gi|315030217|gb|EFT42149.1| putative OxaA-like protein [Enterococcus faecalis TX4000] gi|315032896|gb|EFT44828.1| putative OxaA-like protein [Enterococcus faecalis TX0017] gi|315035618|gb|EFT47550.1| putative OxaA-like protein [Enterococcus faecalis TX0027] gi|315146680|gb|EFT90696.1| putative OxaA-like protein [Enterococcus faecalis TX4244] gi|315150156|gb|EFT94172.1| putative OxaA-like protein [Enterococcus faecalis TX0012] gi|315152151|gb|EFT96167.1| putative OxaA-like protein [Enterococcus faecalis TX0031] gi|315155338|gb|EFT99354.1| putative OxaA-like protein [Enterococcus faecalis TX0043] gi|315159086|gb|EFU03103.1| putative OxaA-like protein [Enterococcus faecalis TX0312] gi|315161678|gb|EFU05695.1| putative OxaA-like protein [Enterococcus faecalis TX0645] gi|315164815|gb|EFU08832.1| putative OxaA-like protein [Enterococcus faecalis TX1302] gi|315166401|gb|EFU10418.1| putative OxaA-like protein [Enterococcus faecalis TX1341] gi|315170298|gb|EFU14315.1| putative OxaA-like protein [Enterococcus faecalis TX1342] gi|315173668|gb|EFU17685.1| putative OxaA-like protein [Enterococcus faecalis TX1346] gi|315574363|gb|EFU86554.1| putative OxaA-like protein [Enterococcus faecalis TX0309B] gi|315579045|gb|EFU91236.1| putative OxaA-like protein [Enterococcus faecalis TX0630] gi|315580162|gb|EFU92353.1| putative OxaA-like protein [Enterococcus faecalis TX0309A] gi|323481394|gb|ADX80833.1| Oxa1p cytochrome oxidase export family protein [Enterococcus faecalis 62] gi|327535690|gb|AEA94524.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis OG1RF] gi|329572240|gb|EGG53900.1| membrane protein insertase, YidC/Oxa1 family [Enterococcus faecalis TX1467] Length = 310 Score = 99.3 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + + + N N+G AI+ T+ V+++ PL Q + Sbjct: 37 FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96 Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 I +++ + Q + ++YK +N++ + GC P+L+Q+P+F +++ Sbjct: 97 IKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + A F G +L + I + L+ Q Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193 Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +S + Q + M P++ VF S PAG+ +YW + + +Q A+ Sbjct: 194 YISMIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 + +++ N Q Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271 >gi|225859797|ref|YP_002741307.1| membrane protein OxaA 1 [Streptococcus pneumoniae 70585] gi|225721177|gb|ACO17031.1| membrane protein OxaA 1 [Streptococcus pneumoniae 70585] Length = 276 Score = 99.3 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 104/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F+ + F + F + + G+ I+L TV ++ + P+ + Q V++ M+ Sbjct: 31 DITAESADFWSKSVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 90 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 91 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 150 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L + D T + PI+ ++ F+ + Sbjct: 151 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 189 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 190 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242 >gi|154686651|ref|YP_001421812.1| OxaA-like protein precursor [Bacillus amyloliquefaciens FZB42] gi|154352502|gb|ABS74581.1| YqjG [Bacillus amyloliquefaciens FZB42] Length = 278 Score = 99.3 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 92/224 (41%), Gaps = 30/224 (13%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE--------LREKFKQSP 407 G +G++I+L T+ V+++ PL Q+ + I +++ Sbjct: 61 FHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRVFQEKMAVIKPQVDSIQAKMKQTKDAEK 120 Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + LQ M++LY+ HN+NP+ GC P+L+Q P+ Y I + E+ Sbjct: 121 QKELQMEMMKLYREHNLNPMAMGCLPMLVQFPILIGFYYAIRSTPEIA------------ 168 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSMFIQMKMSPPPADK--GQ-AMILNW 522 ++ F F + + + G + +S + K SP + Q A I+ + Sbjct: 169 ----SHSFLWFSLGHSDILVSLCAGAMYFLQAYISQKLNEKYSPAAQNPAAMQSAKIMVF 224 Query: 523 -MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 PV+ + PA L +YW S + VQ ++ + H + Sbjct: 225 IFPVMMTVFSLNVPAALPLYWFTSGLFLTVQNVLLQQTHHKKKQ 268 >gi|307068652|ref|YP_003877618.1| preprotein translocase subunit YidC [Streptococcus pneumoniae AP200] gi|306410189|gb|ADM85616.1| Preprotein translocase subunit YidC [Streptococcus pneumoniae AP200] Length = 268 Score = 99.3 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 104/248 (41%), Gaps = 27/248 (10%) Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 + ++ + F+ F + F + + G+ I+L TV ++ + Sbjct: 8 SLLIMTACATNGVTSDITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVL 67 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWP 432 P+ + Q V++ M+ QP+I LRE++ + L++ M +++K + WP Sbjct: 68 LPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWP 127 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+Q+PV A+++ +S ++ + WI +L + D T + Sbjct: 128 ILIQMPVILALFQALSR-VDFLKTGHFLWI-NLGSVDTT-------------------LV 166 Query: 493 WPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 PI+ ++ F+ +S + ++ +PV+ P G+ +YW+ SN Sbjct: 167 LPILAAVFTFLSTWLSNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQ 226 Query: 550 IVQQAVIM 557 ++Q + Sbjct: 227 VLQTYFLN 234 >gi|74221219|dbj|BAE42101.1| unnamed protein product [Mus musculus] Length = 433 Score = 99.3 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 87/231 (37%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ Y + +L + AI TV + L FPL K A + N P++ Sbjct: 113 SYTPVGLIQNLLEYIHVDLSLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQ 172 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ Q + K H+I L L Q PVF + + + Sbjct: 173 KFSARIREAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREM 232 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + + P++++ +M+ ++ Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWCVLE 273 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 274 LGAETGVQSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|262282148|ref|ZP_06059917.1| membrane protein oxaA 2 [Streptococcus sp. 2_1_36FAA] gi|262262602|gb|EEY81299.1| membrane protein oxaA 2 [Streptococcus sp. 2_1_36FAA] Length = 310 Score = 99.3 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 99/261 (37%), Gaps = 39/261 (14%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF----PLAKKQYVSTANM 389 + + + +A ++ + +L FG+AI+L TV V+L+ + + Sbjct: 35 QGFVYQFLVAPMSQVIKYFASDLGLGFGLAIILVTVIVRLIILPLGLYQSWNATYQSEKR 94 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLY----KTHNINPL--AGCWPILLQIPVFFAI 443 + P + E+ K + Q + A Q K + I+ L GC P+L+Q+P F A+ Sbjct: 95 NYLSPIFTPINERMKNAETQEEKLAAQQALMAAQKENGISMLGGVGCLPLLIQMPFFSAL 154 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + + + + F + I +++ + +I Sbjct: 155 FYAARYTKGIAESS-------------------FLGINLGQQSM----ILIVVVGVLYYI 191 Query: 504 QMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q +S D+ Q + M P++ V + PAG+ +YW + I+QQ +I Sbjct: 192 QSLLSLVGLDEEQKEQMKKMIYVSPLMIVIFSLTAPAGVTLYWVVGGFVQILQQFIIN-- 249 Query: 560 HGAEIGLIDRLRSTFSKNYNS 580 + R+ + KN Sbjct: 250 FFIRPYMKKRVAEEYEKNPPK 270 >gi|299783425|gb|ADJ41423.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus fermentum CECT 5716] Length = 290 Score = 99.3 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 41/257 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ++AKPM LM +F L GN +G AI+ V V+L+ PL Q + M+ + Sbjct: 23 YDYLAKPMQHLMEWFAGLFGNSYGWAIVALVVVVRLILLPLMMSQMKKSTMMQERMAMLQ 82 Query: 398 ELREKFKQSPPQVLQ--------KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 ++ + +AM+ YK +N++ GC P+L+Q+PVF A+Y I Sbjct: 83 PQMRALQERQKRAKTPEEQAAASQAMMSFYKDNNVSLTGGIGCLPLLIQLPVFSALYFAI 142 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ A F+G L + I+ ++ IQ + Sbjct: 143 RYSPDLAQASFFG-----------------------LQLGQRSALLAIMAFVAYLIQGWL 179 Query: 508 SPPPADKGQAMIL----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 S + Q + P++ +F AGL +Y+ V +I+Q ++ Sbjct: 180 SMLGVPEDQKKQMRMALMMSPIMILFISWQASAGLGLYFFIGGVFAILQTWLVN---IYR 236 Query: 564 IGLIDRLRSTFSKNYNS 580 + ++ KN Sbjct: 237 PRIRKQIHEEMKKNPPK 253 >gi|225861860|ref|YP_002743369.1| membrane protein OxaA 1 [Streptococcus pneumoniae Taiwan19F-14] gi|225726646|gb|ACO22497.1| membrane protein OxaA 1 [Streptococcus pneumoniae Taiwan19F-14] gi|327389035|gb|EGE87382.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA04375] gi|332199116|gb|EGJ13196.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA41317] Length = 257 Score = 99.3 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ Sbjct: 12 DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 71 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 72 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 131 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L + D T + PI+ ++ F+ + Sbjct: 132 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 170 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 171 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 223 >gi|312868335|ref|ZP_07728535.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parasanguinis F0405] gi|311096080|gb|EFQ54324.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus parasanguinis F0405] Length = 294 Score = 99.3 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 83/229 (36%), Gaps = 36/229 (15%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL----QKAMIQL 418 ++ + + L + K + M ++P + ++E+ K + Q Q+ ++ Sbjct: 56 VTLIVRLIILPLGLYQSWKATYQSEKMNYLKPILGPIQERMKNASSQEEKLLAQQELMAA 115 Query: 419 YKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 + + ++ GC P+L+Q+P F A++ + AD Sbjct: 116 QRENGVSMFGGVGCLPLLIQMPFFSALFFAAQHTK--------------GVADS-----N 156 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMIL----NWMPVVFVFAL 531 F + P + I ++ +IQ +S D+ Q + P++ Sbjct: 157 FLGIALGKPSLLLTAIVAVLY----YIQSMLSLHGIEDETQKESMRKASLMSPIMIGVFS 212 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 AG+ +YW VI I+QQ VI + L R+ + N Sbjct: 213 LISSAGVTLYWVVGGVIQIIQQFVIN--YLIRPNLRKRVAEEYKNNPPK 259 >gi|258655508|ref|YP_003204664.1| hypothetical protein Namu_5412 [Nakamurella multipartita DSM 44233] gi|258558733|gb|ACV81675.1| 60 kDa inner membrane insertion protein [Nakamurella multipartita DSM 44233] Length = 385 Score = 98.9 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 111/295 (37%), Gaps = 49/295 (16%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQ 382 M ++ +I P+ +M ++ + + ++++ ++ + F KQ Sbjct: 1 MTFNFWSLDYIYYPVSGIMWVWHKIFGAVLGPDQAITWVLSVIFLIFTLRAILFKPFMKQ 60 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 S M+ IQP++ +LREK+K Q L + M++L K +NPLA C P L+Q PVF Sbjct: 61 MESQLKMQAIQPRMKQLREKYKDDK-QRLSEEMMKLNKEAGVNPLASCLPALIQAPVFIG 119 Query: 443 IYKVIS---------------------------------ISLEMRHAPFWGWIKDLAAAD 469 ++ V+ + AP G++ A Sbjct: 120 LFHVLRMFQPVNDGPGGPSVWFYRENVYFFNHADVVSMGGAKLPGGAPLVGYMTMQADQL 179 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMS-LSMFIQMKMSPPPADKGQAMIL-----NWM 523 I+ + +P + GI + S S+ Q +M+ A Q I+ Sbjct: 180 AFMDGVREAIIWWGVPLTILAGIATHMTSRRSVARQAQMNVDAAANPQTAIMNKLMLYMF 239 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 P+ +F FP ++ YW +N + Q V ++ + ++ + Sbjct: 240 PLFVIFGGPFFPLAILFYWLANNSWTFGQLYVAHRIQDRKALAQAQVVEEAKEAS 294 >gi|227519877|ref|ZP_03949926.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis TX0104] gi|227072671|gb|EEI10634.1| Oxa1 family cytochrome oxidase biogenesis protein [Enterococcus faecalis TX0104] Length = 310 Score = 98.9 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + + + N N+G AI+ T+ V+++ PL Q + Sbjct: 37 FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96 Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 I +++ + Q + ++YK +N++ + GC P+L+Q+P+F +++ Sbjct: 97 IKPQVDVAQAKMKQASTREEQMAAQAELQRIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + A F G +L + I + L+ Q Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193 Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +S + Q + M P++ VF S PAG+ +YW + + +Q A+ Sbjct: 194 YISMIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 + +++ N Q Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271 >gi|109082863|ref|XP_001099660.1| PREDICTED: mitochondrial inner membrane protein OXA1L [Macaca mulatta] Length = 437 Score = 98.9 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 88/231 (38%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + L+ + + +L + AI TVF + L FPL A + N P+I Sbjct: 118 SHTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVVGQREAAKIHNHLPEIQ 177 Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVF----FAIYKV 446 + + +++ + LY K H I L Q P+F A+ ++ Sbjct: 178 KFSSRVREAKLAGDDTEFYKASSEMALYQKKHGIKLFKPLILPLTQAPIFLSFFIALREM 237 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 ++ + W +DL +DPT + P++++ +M+ ++ Sbjct: 238 ANLPVASLQTGGLWWFQDLTVSDPTY-------------------VLPLVVTATMWAVLE 278 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + ++ MP++ + FP + IYW SN+ S+ Q Sbjct: 279 LGAETGVQSSDLQWMRNVIRVMPLIALPVTMHFPTAVFIYWLSSNLFSLGQ 329 >gi|15903894|ref|NP_359444.1| SpoIIIJ family protein [Streptococcus pneumoniae R6] gi|111658725|ref|ZP_01409362.1| hypothetical protein SpneT_02000138 [Streptococcus pneumoniae TIGR4] gi|116516129|ref|YP_817257.1| SpoIIIJ family protein [Streptococcus pneumoniae D39] gi|182684977|ref|YP_001836724.1| spoIIIJ family protein [Streptococcus pneumoniae CGSP14] gi|183603316|ref|ZP_02714133.2| membrane protein OxaA 1 [Streptococcus pneumoniae SP195] gi|183603675|ref|ZP_02718782.2| membrane protein OxaA 1 [Streptococcus pneumoniae CDC3059-06] gi|183603897|ref|ZP_02722826.2| membrane protein OxaA 1 [Streptococcus pneumoniae MLV-016] gi|221232758|ref|YP_002511912.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae ATCC 700669] gi|225857614|ref|YP_002739125.1| membrane protein OxaA 1 [Streptococcus pneumoniae P1031] gi|298501539|ref|YP_003723479.1| membrane protein OxaA family protein [Streptococcus pneumoniae TCH8431/19A] gi|307128242|ref|YP_003880273.1| membrane protein OxaA 1 [Streptococcus pneumoniae 670-6B] gi|38503004|sp|Q8DN93|OXAA1_STRR6 RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|15459542|gb|AAL00655.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116076705|gb|ABJ54425.1| SpoIIIJ family protein [Streptococcus pneumoniae D39] gi|182630311|gb|ACB91259.1| spoIIIJ family protein [Streptococcus pneumoniae CGSP14] gi|183571669|gb|EDT92197.1| membrane protein OxaA 1 [Streptococcus pneumoniae SP195] gi|183575420|gb|EDT95948.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC3059-06] gi|183577374|gb|EDT97902.1| membrane protein OxaA 1 [Streptococcus pneumoniae MLV-016] gi|220675220|emb|CAR69809.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae ATCC 700669] gi|225725643|gb|ACO21495.1| membrane protein OxaA 1 [Streptococcus pneumoniae P1031] gi|298237134|gb|ADI68265.1| membrane protein OxaA family protein [Streptococcus pneumoniae TCH8431/19A] gi|301802719|emb|CBW35488.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae INV200] gi|306485304|gb|ADM92173.1| membrane protein OxaA 1 [Streptococcus pneumoniae 670-6B] Length = 276 Score = 98.9 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ Sbjct: 31 DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 90 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 91 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 150 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L + D T + PI+ ++ F+ + Sbjct: 151 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 189 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 190 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242 >gi|242241497|ref|ZP_04795942.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis W23144] gi|242235040|gb|EES37351.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis W23144] Length = 305 Score = 98.9 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 105/264 (39%), Gaps = 43/264 (16%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394 +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ M+ Sbjct: 47 FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 106 Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + ++++YK +++NP+ GC PIL+Q+P+ +Y Sbjct: 107 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 166 Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ L + P + W +L D +I + F Sbjct: 167 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 204 Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556 IQ K P + M++ P++ ++ + L +YWS S + ++Q I Sbjct: 205 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANI 264 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580 A+ + + ++ S Sbjct: 265 YYSKLAKKEVQPFIEKYEREHNPS 288 >gi|194466629|ref|ZP_03072616.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri 100-23] gi|194453665|gb|EDX42562.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri 100-23] Length = 316 Score = 98.9 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 41/255 (16%) Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ++AKPM LM + ++ N+G AI++ V V+ + P+ Q + M+ K+ Sbjct: 36 YDYMAKPMQHLMEWLASHMGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKMSKVQ 95 Query: 398 EL--------REKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 L + + + M+ LY+ +NI+ GC P+L+Q+P+F A+Y I Sbjct: 96 PLIKELTEKQKAAKTPEEQAAVSQQMMALYRDNNISLTGGIGCLPLLIQLPIFAALYAAI 155 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ HA F+G +P P I ++ ++ Q + Sbjct: 156 RYSPDLYHATFFG-------------------IPLGKPSI----ILAVLSFIAYAAQSYL 192 Query: 508 SPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + Q + WM P + F + AGL +Y+ + +I+Q ++ Sbjct: 193 GLVGVPEAQKKQMKAAIWMSPFMTFFISITSSAGLGLYFFIGGLFAILQTLMVN---AYR 249 Query: 564 IGLIDRLRSTFSKNY 578 + ++ KN Sbjct: 250 PRIRRQIEEESKKNP 264 >gi|315144755|gb|EFT88771.1| putative OxaA-like protein [Enterococcus faecalis TX2141] Length = 310 Score = 98.9 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + + + N N+G AI+ T+ V+++ PL Q + Sbjct: 37 FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96 Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 I +++ + Q + ++YK +N++ + GC P+L+Q+P+F +++ Sbjct: 97 IKPQVDVAQAKMKQASTREEQMAAQAELQRIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + A F G +L + I + L+ Q Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193 Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +S + Q + M P++ VF S PAG+ +YW + + +Q A+ Sbjct: 194 YISMIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 + +++ N Q Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271 >gi|2988415|gb|AAC08053.1| 60K inner-membrane protein homolog [Treponema pallidum] Length = 167 Score = 98.9 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 50/167 (29%), Positives = 89/167 (53%), Gaps = 10/167 (5%) Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-GWI 462 + Q + + M LY+ NPL+GC P L+Q+P+ FA+Y++ + E R A F WI Sbjct: 5 YKGNTQKIHEEMAXLYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPYWI 64 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL-- 520 DL+ AD +++TL LP + + + + P++ +S + K++ P + Q + Sbjct: 65 PDLSLAD--SVWTLPFALP--VTQWTQMRMLPVLYVVSQIMFSKLTQVPHTEQQKTSMTI 120 Query: 521 --NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 MP+ F F P+GL++YW+ N +++VQQ ++MK + Sbjct: 121 MTYVMPLFFFFFFYDAPSGLLVYWTAMNGVTLVQQ-LVMKRTANKNK 166 >gi|12841194|dbj|BAB25113.1| unnamed protein product [Mus musculus] Length = 433 Score = 98.9 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 86/231 (37%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ Y + +L + AI TV + L FPL K A + N P++ Sbjct: 113 SYTPVGLIQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQ 172 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ Q + K H+I L L PVF + + + Sbjct: 173 KFSARIREAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTHAPVFISFFIALREM 232 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + + P++++ +M+ ++ Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWCVLE 273 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + I+ MP+V + FP+ + +YW SNV S+ Q Sbjct: 274 LGAETGVQSNDLQFMRNIIRVMPLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|169825323|ref|YP_001692934.1| hypothetical protein FMG_1626 [Finegoldia magna ATCC 29328] gi|302380113|ref|ZP_07268586.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna ACS-171-V-Col3] gi|303234455|ref|ZP_07321093.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna BVS033A4] gi|167832128|dbj|BAG09044.1| putative membrane protein [Finegoldia magna ATCC 29328] gi|302312055|gb|EFK94063.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna ACS-171-V-Col3] gi|302494410|gb|EFL54178.1| membrane protein insertase, YidC/Oxa1 family [Finegoldia magna BVS033A4] Length = 243 Score = 98.5 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 65/236 (27%), Positives = 112/236 (47%), Gaps = 42/236 (17%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + F I+I+L T+ KL+ P+ + +QP++ E++ K+K PQ Q M Sbjct: 29 ISYFAISILLLTLIYKLITLPVTIHTQKTQEQNALMQPEMKEIQRKYKN-DPQTQQLKMQ 87 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVIS---------ISLEMRHAPFWGWIKDLAA 467 +LYK +N NPL+GC PI+LQ+ + A+++V+ +S A + WI DL Sbjct: 88 ELYKKYNFNPLSGCLPIILQMVLVLALFRVMREPGKYMFDNVSKINEIARNFFWIPDLTK 147 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-------KGQAMIL 520 DP LFG P+I + + F+ K+S P Q ++ Sbjct: 148 PDPV----LFG--------------LPLINAFTQFLVAKISMPAKSKDKKSNEPDQMEMM 189 Query: 521 -----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 +MP+ F S + +GLI+YW +SNVI ++ + +I + + + + +R Sbjct: 190 NKSMIYFMPIFMFFISSKYASGLILYWGFSNVIEVLIRLII--KNKDKKDVAEEVR 243 >gi|332199472|gb|EGJ13548.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA47901] Length = 257 Score = 98.5 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ Sbjct: 12 DITAESADFWSKLVYFFAKIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 71 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 72 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 131 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L + D T + PI+ ++ F+ + Sbjct: 132 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 170 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 171 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 223 >gi|307705714|ref|ZP_07642560.1| membrane protein oxaA 1 [Streptococcus mitis SK597] gi|307620728|gb|EFN99818.1| membrane protein oxaA 1 [Streptococcus mitis SK597] Length = 274 Score = 98.5 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 101/233 (43%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F+ F + F + + G+ I+L TV ++ L P+ + Q V++ M+ Sbjct: 29 DITANSADFWSKFVYSFAEIIRFLSFNISIGVGIILFTVLIRTLLLPVFQVQMVASRKMQ 88 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 89 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI L G + PI+ ++ F+ + Sbjct: 149 SR-VDFLKTGHFLWIN--------------------LGGVDTTLVLPILAAVFTFLSTWL 187 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P+G+ +YW+ SN ++Q + Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFGVYAPSGVALYWAVSNAYQVLQTYFLN 240 >gi|268610508|ref|ZP_06144235.1| 60 kDa inner membrane insertion protein [Ruminococcus flavefaciens FD-1] Length = 371 Score = 98.5 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 62/304 (20%), Positives = 113/304 (37%), Gaps = 62/304 (20%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 G + I P LM Y + N+ ++I++ T+ +LL FP++ S+A M+ + PK Sbjct: 2 TGLYDIIGVPFGYLMRLIYAIFKNYAVSIIVFTIVTRLLMFPVSYSTQKSSARMQLLNPK 61 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS---LE 452 +++LR+ F +P Q LQ+ +LY+ +NP+A C P +Q+ + F + V+ + Sbjct: 62 LEKLRKSFANNP-QRLQEEQQKLYQEEGVNPMASCLPTFIQMFLLFGVLDVVYKPLTHIL 120 Query: 453 MRHAPFWGWIKDLAAADPTNI------------------------------------FTL 476 ++A DP+ FT+ Sbjct: 121 DMGKSVINSALEIAGVDPSKTGLRGELKIMESLAADKGKFASLGSDFVNKVYEFNQKFTI 180 Query: 477 FGILPFYLPGF---------MHVGIWPIIMSLSM----FIQMKMSPPPADKGQAM----- 518 FG P + + P + L+ F Q Sbjct: 181 FGANLGKTPTLHPETWNKEAVILAAIPFLAGLAQLLYSFYTQMHQKKVNPSMQQAGGGCM 240 Query: 519 --ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 +L MP+ ++ +FPAGL YW WS++IS + + + I + + Sbjct: 241 NVMLYGMPIFSIWMAFTFPAGLGFYWIWSSLISFIITFALNQYFT--PERIKVINEKEKE 298 Query: 577 NYNS 580 + Sbjct: 299 KAKA 302 >gi|15828468|ref|NP_302731.1| inner membrane protein translocase component YidC [Mycobacterium leprae TN] gi|221230945|ref|YP_002504361.1| putative inner membrane protein translocase component YidC [Mycobacterium leprae Br4923] gi|38502903|sp|Q50205|OXAA_MYCLE RecName: Full=Membrane protein oxaA gi|13093898|emb|CAC32242.1| putative conserved membrane protein [Mycobacterium leprae] gi|219934052|emb|CAR72810.1| putative conserved membrane protein [Mycobacterium leprae Br4923] Length = 380 Score = 98.5 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 99/290 (34%), Gaps = 42/290 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 +++ + + + +++M ++ L + +Q +T M Sbjct: 11 LDIVYYPVSWIMWVWYKLFAAVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQM 70 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L+ K+ Q + M +L + H NP+ GC P+L QIPVF +Y + Sbjct: 71 QELQPRIRALQRKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHALRS 129 Query: 450 ---SLEMRHAPFW-------------------------GWIKDLAAADPTNIFTLFGILP 481 + P W + A T L + Sbjct: 130 FNRTTGGFGQPHMSVTENRMTGNYVFTPVDVGHFLDANLWGAPIGAY-MTQRSGLDAFID 188 Query: 482 FYLPGFMHVGI-WPIIMSLSMFIQMKMS----------PPPADKGQAMILNWMPVVFVFA 530 F P + VGI ++ ++ + + S P + L P V Sbjct: 189 FSRPAVILVGIPMMVLAGVATYFNSRASIARQSAEAAENPQTALMNKIALYVFPFGVVVG 248 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 P +I+YW +N+ + QQ + M E + ++ + N+ Sbjct: 249 GPFLPLAIILYWFSNNIWTFGQQHYVFSMIEKEDEAKKQ-KAIERRTANA 297 >gi|150021506|ref|YP_001306860.1| 60 kDa inner membrane insertion protein [Thermosipho melanesiensis BI429] gi|149794027|gb|ABR31475.1| 60 kDa inner membrane insertion protein [Thermosipho melanesiensis BI429] Length = 433 Score = 98.5 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 121/291 (41%), Gaps = 26/291 (8%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + + + G KFS + K ++ G + I D Sbjct: 138 NDRLKNNIFLSFYEKGDILSIIKFSGKTLGGNKVKGANLRFLVYIGPYKKTLIKSGFSDD 197 Query: 326 AIPRFEMLIDW----GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 EML GWF FI P+ + + NFG+ I++ T+ ++ + +PL Sbjct: 198 YEVILEMLKTISGVGGWFDFILYPLVYFFGWINDFTKNFGLTIIVFTIIIRFVLYPLYHS 257 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Q S M+ +QP ++++++K+K Q Q+ +++ Y+ + INP +GC L+Q+P+F Sbjct: 258 QTKSMIKMRKLQPIVEQIKKKYKDP--QKQQQELLKAYRENKINPASGCLMALVQLPIFI 315 Query: 442 AIYKVISISLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y+VI E + + +DL A ++ + G+ I Sbjct: 316 ILYQVIRYYQEEFAFSGKFLIWRDLTAG--GFSANWVFLIIQIVAGYYLALIT------- 366 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 S Q++I+++ +F F P+G+ +Y++ + +I + Sbjct: 367 -------SQDTRTAWQSIIMSF---IFPFLFIGLPSGVFLYYTANTLIQVG 407 >gi|146319668|ref|YP_001199380.1| hypothetical protein SSU05_2014 [Streptococcus suis 05ZYH33] gi|146321863|ref|YP_001201574.1| hypothetical protein SSU98_2016 [Streptococcus suis 98HAH33] gi|253752665|ref|YP_003025806.1| membrane protein OxaA 1 precursor [Streptococcus suis SC84] gi|253754491|ref|YP_003027632.1| membrane protein OxaA 1 precursor [Streptococcus suis P1/7] gi|253756424|ref|YP_003029564.1| membrane protein OxaA 1 precursor [Streptococcus suis BM407] gi|166977421|sp|A4W485|OXAA_STRS2 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|145690474|gb|ABP90980.1| conserved hypothetical protein [Streptococcus suis 05ZYH33] gi|145692669|gb|ABP93174.1| conserved hypothetical protein [Streptococcus suis 98HAH33] gi|251816954|emb|CAZ52603.1| membrane protein OxaA 1 precursor [Streptococcus suis SC84] gi|251818888|emb|CAZ56731.1| membrane protein OxaA 1 precursor [Streptococcus suis BM407] gi|251820737|emb|CAR47499.1| membrane protein OxaA 1 precursor [Streptococcus suis P1/7] gi|292559284|gb|ADE32285.1| Hypothetical protein SSGZ1_1829 [Streptococcus suis GZ1] gi|319759082|gb|ADV71024.1| hypothetical protein SSUJS14_1975 [Streptococcus suis JS14] Length = 270 Score = 98.5 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 103/253 (40%), Gaps = 28/253 (11%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + + ++ + GI I+L T+ ++ L PL + Q S+ M+ + Sbjct: 28 SQSTDAWDRLIYWFASIIQFLSINGQ-IGIGIILFTILIRTLLLPLFQIQMNSSRKMQEL 86 Query: 393 QPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 QP++ +L+ ++ + Q L +A LYK + ++ A P+ +Q+P+ A+++ ++ Sbjct: 87 QPQLKKLQAEYPGTDMESRQQLYEATQALYKENGVSMRASMIPLFIQMPILLALFQALTR 146 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 +E + W+ +L DP I PI+ ++ F+ ++ Sbjct: 147 -VEALKVGHFLWL-NLGEPDPFF-------------------ILPILAAVFTFLSSWLTN 185 Query: 510 PPA--DKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 A I+ + MPV+ F + +G+ +YW+ SN + Q V Sbjct: 186 KSAIEKNMAMTIMTYVMPVMIFFFAVAAASGVALYWTVSNAYQVAQTLVFNNPFKIIAER 245 Query: 567 IDRLRSTFSKNYN 579 ++ + + Sbjct: 246 QAKIDAEKERQAK 258 >gi|169832952|ref|YP_001695392.1| membrane protein OxaA 1 [Streptococcus pneumoniae Hungary19A-6] gi|168995454|gb|ACA36066.1| membrane protein OxaA 1 [Streptococcus pneumoniae Hungary19A-6] Length = 276 Score = 98.5 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F+ F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ Sbjct: 31 DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTILIRTVLLPVFQVQMVASRKMQ 90 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 91 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 150 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L + D T + PI+ ++ F+ + Sbjct: 151 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 189 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 190 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242 >gi|227904438|ref|ZP_04022243.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus acidophilus ATCC 4796] gi|227867813|gb|EEJ75234.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus acidophilus ATCC 4796] Length = 322 Score = 98.5 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 95/254 (37%), Gaps = 35/254 (13%) Query: 339 FYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + ++ +P+ +M +++ G I++ T V+L+ PL Q + + + Sbjct: 43 YQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQEKMAR 102 Query: 396 IDELREKFKQSPPQVLQKAMI---------QLYKTHNINPL--AGCWPILLQIPVFFAIY 444 + + + + +LY + ++ GC P+L+Q+P+ + IY Sbjct: 103 LQPQMKLIQNAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGIGCLPLLIQLPIMWGIY 162 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + S E+ H+ F+G + + I + + +I Sbjct: 163 QAVFYSQELAHSTFFG-------------------ISLSQKSVVLAIIATVFTVIQGYIS 203 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P K ++ + P++ +F SF L +YW+ N + I+QQ ++ + Sbjct: 204 TISIPEEQKKTMQSMMLFNPIMTLFFSLSFSGALALYWAAGNFVMIIQQLIVTFILT--P 261 Query: 565 GLIDRLRSTFSKNY 578 + + + Sbjct: 262 KVKQHVADELKEKP 275 >gi|194398180|ref|YP_002038622.1| SpoIIIJ family protein [Streptococcus pneumoniae G54] gi|194357847|gb|ACF56295.1| SpoIIIJ family protein [Streptococcus pneumoniae G54] Length = 274 Score = 98.5 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ Sbjct: 29 DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 88 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 89 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L + D T + PI+ ++ F+ + Sbjct: 149 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 187 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240 >gi|169334989|ref|ZP_02862182.1| hypothetical protein ANASTE_01395 [Anaerofustis stercorihominis DSM 17244] gi|169257727|gb|EDS71693.1| hypothetical protein ANASTE_01395 [Anaerofustis stercorihominis DSM 17244] Length = 249 Score = 98.5 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 65/230 (28%), Positives = 118/230 (51%), Gaps = 17/230 (7%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 ++ + YN VG++G+AI+L +F KL+ P++ KQ ST MK I P++ +++EKF Sbjct: 1 MLFGKVLLFIYNFVGSYGLAIILFALFAKLILLPISYKQIKSTQIMKVINPEVQKVQEKF 60 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE------MRHAP 457 K + + M ++Y+ +N NP++GC P+ LQ P+ ++ VI M+H Sbjct: 61 KNDKAK-QGEEMWKVYEKYNYNPMSGCLPLFLQFPIIIGLFGVIRQPEAYVFIDGMKHVS 119 Query: 458 F-WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 + WIKD++ + + F LP F+ + I P+I ++ +IQ K + Sbjct: 120 MSFLWIKDISV----SALDIARANGFALPTFLAM-IIPLINVIATYIQQKQATANQATEM 174 Query: 517 ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 M+ N M ++ + +FP L IYW+ + ++ I+Q ++ K Sbjct: 175 GGTMQMMNNMMTLMIGWMSLTFPGALSIYWASTTILGILQTEIMYKFMPI 224 >gi|213966247|ref|ZP_03394431.1| preprotein translocase YidC subunit [Corynebacterium amycolatum SK46] gi|213951099|gb|EEB62497.1| preprotein translocase YidC subunit [Corynebacterium amycolatum SK46] Length = 382 Score = 98.5 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 111/283 (39%), Gaps = 65/283 (22%) Query: 338 WFYFIAKPMFMLMSYFYNL---------VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F+ P+ ++ +++ ++ +AI+L V +++L F Q S Sbjct: 1 MLNFVYWPISAILWFWHKASGFLFDPSSGISWVLAIILLVVTIRILLFKPMLNQQRSAIK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ + P++ ++EK+K Q AM QL K +NPL GC PIL+Q+PVF ++ V+ Sbjct: 61 MQQLAPEMQAIKEKYKN-DQQAQALAMRQLQKEMGVNPLGGCLPILVQMPVFIGLFHVLR 119 Query: 449 I-------------SLEM-RHAPFWGWIKD----------LAAA---------DPTNIFT 475 S+E + P + + D L A D FT Sbjct: 120 SFNRTGTSGNALGMSVEQNWNTPNYIFGVDEVRSFLLARVLNAPLSSSVGMGEDQYAAFT 179 Query: 476 LFGILPFYLPGFMHVGIWP--IIMSLSMFIQMKMS--------------------PPPAD 513 + G + + + P +I +L+ +MS D Sbjct: 180 VPGTPADFTRMDIMIVAIPLIVIAALATHFNARMSVERTRARQEAGLVKRQEGPMGQQMD 239 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M+L + P++ + + + GL++Y +NV + QQ I Sbjct: 240 MMNKMMLWFFPIMILVTGAFWHIGLLVYMVTNNVWTYFQQRYI 282 >gi|148544447|ref|YP_001271817.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM 20016] gi|184153811|ref|YP_001842152.1| hypothetical protein LAR_1156 [Lactobacillus reuteri JCM 1112] gi|227363125|ref|ZP_03847260.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus reuteri MM2-3] gi|325682769|ref|ZP_08162285.1| membrane protein OxaA 2 [Lactobacillus reuteri MM4-1A] gi|148531481|gb|ABQ83480.1| 60 kDa inner membrane insertion protein [Lactobacillus reuteri DSM 20016] gi|183225155|dbj|BAG25672.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112] gi|227071843|gb|EEI10131.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus reuteri MM2-3] gi|324977119|gb|EGC14070.1| membrane protein OxaA 2 [Lactobacillus reuteri MM4-1A] Length = 316 Score = 98.5 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 41/255 (16%) Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ++AKPM LM + ++ N+G AI++ V V+ + P+ Q + M+ K+ Sbjct: 36 YDYMAKPMQHLMEWLASHMGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKMSKVQ 95 Query: 398 EL--------REKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 L + + + M+ LY+ +NI+ GC P+L+Q+P+F A+Y I Sbjct: 96 PLIKELTEKQKAAKTPEEQAAVSQQMMALYRDNNISLTGGIGCLPLLIQLPIFAALYAAI 155 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ HA F+G +P P I ++ ++ Q + Sbjct: 156 RYSPDLYHATFFG-------------------IPLGKPSI----ILAVLSFIAYAAQSYL 192 Query: 508 SPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + Q + WM P + F + AGL +Y+ + +I+Q ++ Sbjct: 193 GLVGVPEAQKKQMKAAIWMSPFMTFFISITSSAGLGLYFFIGGLFAILQTLMVN---AYR 249 Query: 564 IGLIDRLRSTFSKNY 578 + ++ KN Sbjct: 250 PRIRRQIEEESKKNP 264 >gi|15901862|ref|NP_346466.1| SpoIIIJ family protein [Streptococcus pneumoniae TIGR4] gi|148989738|ref|ZP_01821047.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP6-BS73] gi|148992121|ref|ZP_01821895.1| SpoIIIJ family protein [Streptococcus pneumoniae SP9-BS68] gi|148998805|ref|ZP_01826242.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP11-BS70] gi|149007810|ref|ZP_01831406.1| SpoIIIJ family protein [Streptococcus pneumoniae SP18-BS74] gi|149011894|ref|ZP_01833042.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP19-BS75] gi|149023609|ref|ZP_01836112.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP23-BS72] gi|168484114|ref|ZP_02709066.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1873-00] gi|168487013|ref|ZP_02711521.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1087-00] gi|168492462|ref|ZP_02716605.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC0288-04] gi|298229605|ref|ZP_06963286.1| membrane protein OxaA 1 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254931|ref|ZP_06978517.1| membrane protein OxaA 1 [Streptococcus pneumoniae str. Canada MDR_19A] gi|303260531|ref|ZP_07346498.1| spoIIIJ family protein [Streptococcus pneumoniae SP-BS293] gi|303262888|ref|ZP_07348824.1| spoIIIJ family protein [Streptococcus pneumoniae SP14-BS292] gi|303265199|ref|ZP_07351111.1| spoIIIJ family protein [Streptococcus pneumoniae BS397] gi|303266566|ref|ZP_07352452.1| spoIIIJ family protein [Streptococcus pneumoniae BS457] gi|303268650|ref|ZP_07354441.1| spoIIIJ family protein [Streptococcus pneumoniae BS458] gi|38503144|sp|Q97NI6|OXAA1_STRPN RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|14973552|gb|AAK76106.1| SpoIIIJ family protein [Streptococcus pneumoniae TIGR4] gi|147755366|gb|EDK62416.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP11-BS70] gi|147760660|gb|EDK67633.1| SpoIIIJ family protein [Streptococcus pneumoniae SP18-BS74] gi|147763849|gb|EDK70782.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP19-BS75] gi|147924854|gb|EDK75937.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP6-BS73] gi|147929170|gb|EDK80181.1| SpoIIIJ family protein [Streptococcus pneumoniae SP9-BS68] gi|147929708|gb|EDK80699.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP23-BS72] gi|172042591|gb|EDT50637.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1873-00] gi|183570087|gb|EDT90615.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC1087-00] gi|183573390|gb|EDT93918.1| membrane protein OxaA 1 [Streptococcus pneumoniae CDC0288-04] gi|302635971|gb|EFL66470.1| spoIIIJ family protein [Streptococcus pneumoniae SP14-BS292] gi|302638329|gb|EFL68797.1| spoIIIJ family protein [Streptococcus pneumoniae SP-BS293] gi|302641815|gb|EFL72171.1| spoIIIJ family protein [Streptococcus pneumoniae BS458] gi|302643903|gb|EFL74164.1| spoIIIJ family protein [Streptococcus pneumoniae BS457] gi|302645280|gb|EFL75515.1| spoIIIJ family protein [Streptococcus pneumoniae BS397] gi|332071754|gb|EGI82246.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA17545] gi|332071835|gb|EGI82325.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA17570] gi|332199188|gb|EGJ13267.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA47368] Length = 274 Score = 98.5 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ Sbjct: 29 DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 88 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 89 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L + D T + PI+ ++ F+ + Sbjct: 149 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 187 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240 >gi|58337788|ref|YP_194373.1| family protein [Lactobacillus acidophilus NCFM] gi|58255105|gb|AAV43342.1| putative family protein [Lactobacillus acidophilus NCFM] Length = 322 Score = 98.1 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 97/254 (38%), Gaps = 35/254 (13%) Query: 339 FYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + ++ +P+ +M +++ G I++ T V+L+ PL Q + + + Sbjct: 43 YQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQEKMAR 102 Query: 396 IDELREKFKQSPPQVLQK--AMI-------QLYKTHNINPL--AGCWPILLQIPVFFAIY 444 + + + + + +LY + ++ GC P+L+Q+P+ + IY Sbjct: 103 LQPQMKLIQNAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGIGCLPLLIQLPIMWGIY 162 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + S E+ H+ F+G + + I + + +I Sbjct: 163 QAVFYSQELAHSTFFG-------------------ISLSQKSVVLAIIATVFTVIQGYIS 203 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P K ++ + P++ +F SF L +YW+ N + I+QQ ++ + ++ Sbjct: 204 TIGIPEEQKKTMQSMMLFNPIMTLFFSLSFSGALALYWAAGNFVMIIQQLIVTFILTPKV 263 Query: 565 GLIDRLRSTFSKNY 578 + + Sbjct: 264 K--QHVADELKEKP 275 >gi|225855530|ref|YP_002737042.1| membrane protein OxaA 1 [Streptococcus pneumoniae JJA] gi|225724047|gb|ACO19900.1| membrane protein OxaA 1 [Streptococcus pneumoniae JJA] gi|301794976|emb|CBW37440.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae INV104] Length = 276 Score = 98.1 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ Sbjct: 31 DITAESADFWSKLVYFFAKIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 90 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 91 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 150 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L + D T + PI+ ++ F+ + Sbjct: 151 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 189 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 190 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242 >gi|227543950|ref|ZP_03973999.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus reuteri CF48-3A] gi|300909700|ref|ZP_07127161.1| membrane protein OxaA 2 [Lactobacillus reuteri SD2112] gi|68160786|gb|AAY86839.1| lr0974 [Lactobacillus reuteri] gi|227186066|gb|EEI66137.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus reuteri CF48-3A] gi|300893565|gb|EFK86924.1| membrane protein OxaA 2 [Lactobacillus reuteri SD2112] Length = 316 Score = 98.1 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 41/255 (16%) Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ++AKPM LM + ++ N+G AI++ V V+ + P+ Q + M+ K+ Sbjct: 36 YDYMAKPMQHLMEWLASHMGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTIMQEKMSKVQ 95 Query: 398 EL--------REKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 L + + + M+ LY+ +NI+ GC P+L+Q+P+F A+Y I Sbjct: 96 PLIKELTEKQKAAKTPEEQAAVSQQMMALYRDNNISLTGGIGCLPLLIQLPIFAALYAAI 155 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ HA F+G +P P I ++ ++ Q + Sbjct: 156 RYSPDLYHATFFG-------------------IPLGKPSI----ILAVLSFIAYAAQSYL 192 Query: 508 SPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + Q + WM P + F + AGL +Y+ + +I+Q ++ Sbjct: 193 GLVGVPEAQKKQMKAAIWMSPFMTFFISITSSAGLGLYFFIGGLFAILQTLMVN---AYR 249 Query: 564 IGLIDRLRSTFSKNY 578 + ++ KN Sbjct: 250 PRIRRQIEEESKKNP 264 >gi|303254945|ref|ZP_07341026.1| SpoIIIJ family protein [Streptococcus pneumoniae BS455] gi|302598081|gb|EFL65146.1| SpoIIIJ family protein [Streptococcus pneumoniae BS455] Length = 274 Score = 98.1 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ Sbjct: 29 DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 88 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 89 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L + D T + PI+ ++ F+ + Sbjct: 149 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 187 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVTLYWTVSNAYQVLQTYFLN 240 >gi|148704410|gb|EDL36357.1| oxidase assembly 1-like, isoform CRA_a [Mus musculus] Length = 351 Score = 98.1 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 79/209 (37%), Gaps = 35/209 (16%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-- 417 + AI TV + L FPL K A + N P++ + + +++ Q + Sbjct: 53 WWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLAGDQAEFYKAT 112 Query: 418 -----LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAA 468 K H+I L L Q PVF + + + + W +DL + Sbjct: 113 IEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVPSLQTGGLWWFQDLTVS 172 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----QAMILNWM 523 DP + + P++++ +M+ +++ + I+ M Sbjct: 173 DP-------------------IYVLPLVVTATMWCVLELGAETGVQSNDLQFMRNIIRVM 213 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P+V + FP+ + +YW SNV S+ Q Sbjct: 214 PLVVLPVTIHFPSAVFMYWLSSNVFSLCQ 242 >gi|308174180|ref|YP_003920885.1| Sec-independent factor for membrane protein insertion [Bacillus amyloliquefaciens DSM 7] gi|307607044|emb|CBI43415.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus amyloliquefaciens DSM 7] gi|328554124|gb|AEB24616.1| OxaA-like protein precursor [Bacillus amyloliquefaciens TA208] gi|328912515|gb|AEB64111.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus amyloliquefaciens LL3] Length = 278 Score = 98.1 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 92/224 (41%), Gaps = 30/224 (13%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE--------LREKFKQSP 407 G +G++I+L T+ V+++ PL Q+ + I +++ Sbjct: 61 FHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRVFQEKMAVIKPQVDSIQAKMKKTKDAEK 120 Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + LQ M++LY+ HN+NP+ GC P+L+Q P+ Y I + E+ Sbjct: 121 QKELQMEMMKLYREHNLNPMAMGCLPMLVQFPILIGFYYAIRSTPEIA------------ 168 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSMFIQMKMSPPPADK--GQ-AMILNW 522 ++ F F + + + G + +S + K SP + Q A I+ + Sbjct: 169 ----SHSFLWFSLGHSDMLVSLCAGAMYFLQAYVSQKLNEKYSPAAQNPAAMQSAKIMVF 224 Query: 523 -MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 PV+ + PA L +YW S + VQ ++ + H + Sbjct: 225 IFPVMMTVFSLNVPAALPLYWFTSGLFLTVQNVLLQQTHHKKKQ 268 >gi|205373230|ref|ZP_03226034.1| membrane protein oxaA precursor [Bacillus coahuilensis m4-4] Length = 253 Score = 97.8 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 36/245 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK------- 390 + F+ +L L GNFG+AI++ T+ ++L+ P K + + MK Sbjct: 30 YDTFVFPFAKLLEWLGNTLGGNFGLAIIIITIIIRLVLMPFMLKTFKNQQEMKGKMDKLK 89 Query: 391 -NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVIS 448 +Q +L+E + LQ+ M+QLY+ H +NPL GC P+++Q+P+ +Y I Sbjct: 90 PEMQEIQKKLKETKDTEEQRKLQQEMMQLYQKHGVNPLNMGCLPLIIQMPILLGLYYAII 149 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S ++ + W F L I +I + F Q K+S Sbjct: 150 GSPDIA-THTFLW------------FNLGEAN----------IIMALIAGVVYFGQAKVS 186 Query: 509 P---PPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 Q I++++ PV+ + + PA L +YW+ V I Q K + AE Sbjct: 187 LIGIAEEQLQQMKIISYLSPVMILIFSLNAPAALPLYWTVGGVFVIGQTLFAKKYYQAEP 246 Query: 565 GLIDR 569 L + Sbjct: 247 TLNEE 251 >gi|251812194|ref|ZP_04826667.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis BCM-HMP0060] gi|251804291|gb|EES56948.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis BCM-HMP0060] Length = 305 Score = 97.8 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 105/264 (39%), Gaps = 43/264 (16%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394 +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ M+ Sbjct: 47 FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 106 Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + ++++YK +++NP+ GC PIL+Q+P+ +Y Sbjct: 107 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 166 Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ L + P + W +L D +I + F Sbjct: 167 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 204 Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556 IQ K P + M++ P++ ++ + L +YWS S + ++Q + Sbjct: 205 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANV 264 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580 A+ + + ++ S Sbjct: 265 YYSKLAKKEVQPFIEKYEREHNPS 288 >gi|293366055|ref|ZP_06612743.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|291319778|gb|EFE60136.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] Length = 305 Score = 97.8 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 104/263 (39%), Gaps = 43/263 (16%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394 +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ M+ Sbjct: 47 FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 106 Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + ++++YK +++NP+ GC PIL+Q+P+ +Y Sbjct: 107 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 166 Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ L + P + W +L D +I + F Sbjct: 167 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 204 Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556 IQ K P + M++ P++ ++ + L +YWS S + ++Q I Sbjct: 205 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANI 264 Query: 557 MKMHGAEIGLIDRLRSTFSKNYN 579 A+ + + ++ Sbjct: 265 YYSKLAKKEVQPFIEKYEREHNP 287 >gi|293387301|ref|ZP_06631858.1| SpoJ protein [Enterococcus faecalis S613] gi|291083338|gb|EFE20301.1| SpoJ protein [Enterococcus faecalis S613] Length = 292 Score = 97.8 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + + + + N N+G AI+ T+ V+++ PL Q + Sbjct: 37 FVYNFLVLPMSNAITYLVDNFNWNYGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQA 96 Query: 396 IDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 I +++ + Q + ++YK +N++ + GC P+L+Q+P+F +++ Sbjct: 97 IKPQVDVAQAKMKQASTREEQMAAQAELQKIYKENNVSMVGGIGCLPLLIQMPIFSSLFF 156 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + A F G +L + I + L+ Q Sbjct: 157 AARYTKGIATASFLG--MNLGQPNM---------------------ILVALAGLAYLAQG 193 Query: 506 KMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +S + Q + M P++ VF S PAG+ +YW + + +Q A+ Sbjct: 194 YISMIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIFTCIQSAITN--IL 251 Query: 562 AEIGLIDRLRSTFSKNYNSQ 581 + +++ N Q Sbjct: 252 LRPRIKKQVQEELKNNPPKQ 271 >gi|274318365|ref|NP_001162055.1| oxidase assembly 1-like [Rattus norvegicus] gi|149063882|gb|EDM14152.1| rCG23545, isoform CRA_c [Rattus norvegicus] Length = 433 Score = 97.8 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 86/231 (37%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ Y + +L + AI TV + L FPL K A + N P++ Sbjct: 113 SYTPVGLIQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQ 172 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ Q + K H+I L Q P+F + + + Sbjct: 173 KFSARIREAKLSGDQAEFYKATIEMTHYQKKHDIKFFRPLILPLTQAPIFISFFIALREM 232 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF---- 502 + W +DL +DP + + P++++ +M+ Sbjct: 233 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATMWGVLE 273 Query: 503 IQMKMSPPPAD-KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + +D + ++ MP+ + FP+ + +YW SNV S+ Q Sbjct: 274 LGAETGMQSSDLQLMRNVIRVMPLAVLPVTIHFPSAVFMYWLSSNVFSLCQ 324 >gi|307707727|ref|ZP_07644206.1| membrane protein OxaA 1 [Streptococcus mitis NCTC 12261] gi|307616225|gb|EFN95419.1| membrane protein OxaA 1 [Streptococcus mitis NCTC 12261] Length = 274 Score = 97.8 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 100/233 (42%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ D F+ F + F + + G+ I+L T+ ++ + P+ + Q V++ M+ Sbjct: 29 DITADSTDFWSKFVYFFAEIIRFLSFDISIGVGIILFTILIRTVLLPVFQVQMVASRKMQ 88 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 89 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI L G + PI+ ++ F+ + Sbjct: 149 SR-VDFLKTGHFLWIN--------------------LGGVDTTLVLPILAAVFTFLSTWL 187 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240 >gi|227890587|ref|ZP_04008392.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus salivarius ATCC 11741] gi|227867525|gb|EEJ74946.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus salivarius ATCC 11741] gi|300214345|gb|ADJ78761.1| 60 kDa inner membrane protein [Lactobacillus salivarius CECT 5713] Length = 307 Score = 97.8 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 97/254 (38%), Gaps = 33/254 (12%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +A P L+ + L G++G +I++ T V+L+ P+ Q + I Sbjct: 37 YEKLAIPTQHLLEWLSGVLGGSYGWSIIVITFIVRLIMMPIMINQSKKATIQQEKIAMIR 96 Query: 398 ELREKFKQS--------PPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 K ++ +AM++LY+ +NI+ + GC P+L+Q+P+F A+Y I Sbjct: 97 PQLAKIQEQQKNAKTPEERNAASQAMMKLYQENNISMVGGIGCLPLLIQMPIFAALYAAI 156 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S E+ T F + F V + +I +L ++ Sbjct: 157 QYSPEL-------------------SKTTFMGINLGHRSFTFVVLTFVIYALQGWLSTLG 197 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P K ++ PV+ PAGL +Y+ + + +Q +I M + Sbjct: 198 LPEEQKKQMQSMIIVSPVMLTGMTYISPAGLGLYFFIGGIFACIQTLIINFM---RPRIR 254 Query: 568 DRLRSTFSKNYNSQ 581 ++ + Sbjct: 255 KDIKKELKNKPIKE 268 >gi|149063883|gb|EDM14153.1| rCG23545, isoform CRA_d [Rattus norvegicus] Length = 411 Score = 97.8 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 80/218 (36%), Gaps = 35/218 (16%) Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 F L + AI TV + L FPL K A + N P++ + + +++ Sbjct: 104 QSFAELGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARIREAKLSG 163 Query: 411 LQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFW 459 Q + K H+I L Q P+F + + + + Sbjct: 164 DQAEFYKATIEMTHYQKKHDIKFFRPLILPLTQAPIFISFFIALREMANLPVPSLQTGGL 223 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF----IQMKMSPPPAD-K 514 W +DL +DP + + P++++ +M+ + + +D + Sbjct: 224 WWFQDLTVSDP-------------------IYVLPLVVTATMWGVLELGAETGMQSSDLQ 264 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ MP+ + FP+ + +YW SNV S+ Q Sbjct: 265 LMRNVIRVMPLAVLPVTIHFPSAVFMYWLSSNVFSLCQ 302 >gi|289434661|ref|YP_003464533.1| SpoJ family translocase subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170905|emb|CBH27447.1| SpoJ family translocase subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 275 Score = 97.8 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 97/251 (38%), Gaps = 36/251 (14%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393 Y I +M + N+G+AI++TT+ ++ L PL + + M++ Sbjct: 36 TYLIQPFTSFIMFVASFVGDNYGVAIIITTLIIRALIMPLNMRTAKAQMGMQSKMAVAKP 95 Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449 L+ + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I Sbjct: 96 EIDEIQARLKRATSKEEQATIQKEMMTVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S E+ + W +L + D + +I L Q +S Sbjct: 156 SSEIASHS-FLWF-NLGSPDM---------------------VLAVIAGLVYLAQYFVSM 192 Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 Q + + P++ +F + P+ L +YW+ + Q + K++ + Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHP 252 Query: 566 LIDRLRSTFSK 576 + + + Sbjct: 253 EVKIMEQEEKE 263 >gi|237650612|ref|ZP_04524864.1| membrane protein OxaA 1 [Streptococcus pneumoniae CCRI 1974] gi|237821072|ref|ZP_04596917.1| membrane protein OxaA 1 [Streptococcus pneumoniae CCRI 1974M2] Length = 274 Score = 97.8 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ Sbjct: 29 DITAESADFWSKLVYFFAKIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 88 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 89 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L + D T + PI+ ++ F+ + Sbjct: 149 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 187 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240 >gi|301800797|emb|CBW33449.1| membrane protein OxaA 1 precursor [Streptococcus pneumoniae OXC141] Length = 276 Score = 97.8 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ Sbjct: 31 DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 90 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 91 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 150 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L + D T + PI+ ++ F+ + Sbjct: 151 SR-VDFLKTGQFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 189 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 190 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242 >gi|90961500|ref|YP_535416.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118] gi|90820694|gb|ABD99333.1| 60 kDa inner membrane protein [Lactobacillus salivarius UCC118] Length = 307 Score = 97.8 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 97/254 (38%), Gaps = 33/254 (12%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +A P L+ + L G++G +I++ T V+L+ P+ Q + I Sbjct: 37 YEKLAMPTQHLLEWLSGVLGGSYGWSIIVITFIVRLIMMPIMINQSKKATIQQEKIAMIR 96 Query: 398 ELREKFKQS--------PPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 K ++ +AM++LY+ +NI+ + GC P+L+Q+P+F A+Y I Sbjct: 97 PQLAKIQEQQKNAKTPEERNAASQAMMKLYQENNISMVGGIGCLPLLIQMPIFAALYAAI 156 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S E+ T F + F V + +I +L ++ Sbjct: 157 QYSPEL-------------------SKTTFMGINLGHRSFTFVVLTFVIYALQGWLSTLG 197 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P K ++ PV+ PAGL +Y+ + + +Q +I M + Sbjct: 198 LPEEQKKQMQSMIIVSPVMLTGMTYISPAGLGLYFFIGGIFACIQTLIINFM---RPRIR 254 Query: 568 DRLRSTFSKNYNSQ 581 ++ + Sbjct: 255 KDIKKELKNKPIKE 268 >gi|289167102|ref|YP_003445369.1| oxaA1 [Streptococcus mitis B6] gi|288906667|emb|CBJ21501.1| oxaA1 [Streptococcus mitis B6] Length = 276 Score = 97.8 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 100/233 (42%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ D F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ Sbjct: 31 DITADSADFWSKFVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 90 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 91 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 150 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI L G + P++ ++ F+ + Sbjct: 151 SR-VDFLKTGHFLWIN--------------------LGGVDTTLVLPVLAAVFTFLSTWL 189 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 190 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 242 >gi|332222935|ref|XP_003260624.1| PREDICTED: mitochondrial inner membrane protein OXA1L [Nomascus leucogenys] Length = 436 Score = 97.8 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 82/231 (35%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ + + +L + AI TVF + L FPL A + N P+I Sbjct: 118 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 177 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ + K H I + Q P+F + + + Sbjct: 178 KFSSRIREAKLAGDHTEYYKASSEMAFYQKKHGIKLFKPLILPVTQAPIFISFFIALREM 237 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + I P+ ++ +M+ ++ Sbjct: 238 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 278 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + ++ MP++ + FP + +YW SN+ S+ Q Sbjct: 279 LGAETGVQSSDLQWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLAQ 329 >gi|229544288|ref|ZP_04433347.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1] gi|229325427|gb|EEN91103.1| 60 kDa inner membrane insertion protein [Bacillus coagulans 36D1] Length = 258 Score = 97.8 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 36/242 (14%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 YF++ ++ + L G++GIAI++ T+ ++L+ P + M++ + Sbjct: 37 YFVSPFSVVIKATAQLLHGDYGIAIIVLTLIIRLILMPFMLHTFKKQQIMQDKMKVLKPE 96 Query: 400 REKFK--------QSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISIS 450 +K + + LQ+ M+ LY+ H +NPL GC PI++Q+P+ Y I S Sbjct: 97 MDKLQTKIKAAKTKEEQAKLQQEMMGLYQKHGVNPLNMGCLPIIIQMPILMGFYYAIRGS 156 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E+ T+ F F + +P I+ + FIQ ++S Sbjct: 157 KEIA----------------THSFLWFNLGQTDIP-------MAILAGVIYFIQAQISLI 193 Query: 511 PADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + Q + +M P++ +F S PA L +YW+ S + I Q + K + + Sbjct: 194 GIPEEQKKQMKYMMLMSPIMILFVSFSAPAVLPLYWTVSGLFMIGQTLIQKKFYQSHPPK 253 Query: 567 ID 568 + Sbjct: 254 EE 255 >gi|116490952|ref|YP_810496.1| preprotein translocase subunit YidC [Oenococcus oeni PSU-1] gi|118586222|ref|ZP_01543686.1| integral membrane protein [Oenococcus oeni ATCC BAA-1163] gi|116091677|gb|ABJ56831.1| Preprotein translocase subunit YidC [Oenococcus oeni PSU-1] gi|118433338|gb|EAV40040.1| integral membrane protein [Oenococcus oeni ATCC BAA-1163] Length = 344 Score = 97.8 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 89/254 (35%), Gaps = 15/254 (5%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 ++ M + + + G AI+ T ++++ FP+ Q Sbjct: 39 WLWIGQYMVAFMHWMANDVFKSTNGIGFAIIAITAVIRIVLFPIMFDQQRKATIQSEKMA 98 Query: 395 KIDELREKFKQSPPQVLQKA--------MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 + K + + + M+ +Y+ +N++ + G +L+Q+P+ ++Y Sbjct: 99 MLQPQLSKVQAAMKTAQTQEEKVAVNTAMMSVYRENNVSMIGGVNFLSMLIQLPIISSLY 158 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I +S + ++ + F + Y P I I + Sbjct: 159 TAIRLSTSVLKTDHINPATYSSSF--LLNGSHFFGIALYKPSITIAVIAGIFYLAQSWFM 216 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +K +P K ++ + P++ F A L +Y+ ++Q +++K Sbjct: 217 LKTTPEAQRKQMQTMIWFTPIMMFFFAIFQSAALGLYFVVGGFFVLIQTLILLK---IRP 273 Query: 565 GLIDRLRSTFSKNY 578 L +++R F Sbjct: 274 KLQEKIRKEFKVKN 287 >gi|290890426|ref|ZP_06553501.1| hypothetical protein AWRIB429_0891 [Oenococcus oeni AWRIB429] gi|290479822|gb|EFD88471.1| hypothetical protein AWRIB429_0891 [Oenococcus oeni AWRIB429] Length = 344 Score = 97.4 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 91/254 (35%), Gaps = 15/254 (5%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 ++ M + + + G AI+ T ++++ FP+ Q Sbjct: 39 WLWIGQYMVAFMHWMANDVFKSTNGIGFAIIAITAVIRIVLFPIMFDQQRKATIQSEKMA 98 Query: 395 KIDELREKFKQSPPQVLQKA--------MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 + K + + + M+ +Y+ +N++ + G +L+Q+P+ ++Y Sbjct: 99 MLQPQLSKVQAAMKTAQTQEEKVAVNTAMMSVYRENNVSMIGGVNFLSMLIQLPIISSLY 158 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I +S + ++ + F + Y P I I + Sbjct: 159 TAIRLSTSVLKTDHINPATYSSSF--LLNGSHFFGIALYKPSITIAVIAGIFYLAQSWFM 216 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +K +P K ++ + P++ F A L +Y+ ++Q +++K+H Sbjct: 217 LKTTPEAQRKQMQTMIWFTPIMMFFFAIFQSAALGLYFVVGGFFVLIQTLILLKIH---P 273 Query: 565 GLIDRLRSTFSKNY 578 L +++R F Sbjct: 274 KLQEKIRKEFKVKN 287 >gi|289450229|ref|YP_003475561.1| YidC/Oxa1 family membrane protein insertase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184776|gb|ADC91201.1| membrane protein insertase, YidC/Oxa1 family [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 321 Score = 97.4 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 121/318 (38%), Gaps = 85/318 (26%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 M+ + +M Y++ N+G+ I++ TV ++L+ P + KQ+ +T + Sbjct: 1 MIYTASILSPLYVAFSWIMRNLYDIFNNYGLVIIIFTVAIRLIMIPFSVKQHKTTLKTQA 60 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-- 449 + P++D+L+ + Q LQ+A + LY+ HN++ GC P LL + + + +Y+++S Sbjct: 61 LAPQLDDLK-RVYGKDRQGLQEATMALYRKHNVSQFGGCLPSLLPLIIIWPVYRMVSSPL 119 Query: 450 ----------------------------------------------SLEMRHAPFWGWIK 463 + E +A GW+K Sbjct: 120 QYISGAVTENITKLAQHLNQSGLITASELKNLAYSDIPVLTVLHTHATEFANAVEQGWLK 179 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMH---------VGIWPIIMSLSMFIQMKM------- 507 DP + G P + + I ++ +S F+ KM Sbjct: 180 ASQLIDPYFLGVNLGDTATINPKLLFGDQMSRYLPILIIVLLAVVSTFLMSKMMEWTNPS 239 Query: 508 -------------SPP---PADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNV 547 +P D Q ++ MP++ ++ S PA + IYW N+ Sbjct: 240 YKKIKESKARAKNNPARSEVTDMTQQGMMKGMKFTMPLITLYMCFSMPAAMSIYWIVGNL 299 Query: 548 ISIVQQAVIMKMHGAEIG 565 ++++QQ ++ ++ + Sbjct: 300 MAMLQQYILYALYTKKTK 317 >gi|57867621|ref|YP_189262.1| hypothetical protein SERP1697 [Staphylococcus epidermidis RP62A] gi|81673891|sp|Q5HMD1|OXAA2_STAEQ RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|57638279|gb|AAW55067.1| membrane protein, putative [Staphylococcus epidermidis RP62A] gi|319399577|gb|EFV87832.1| 60Kd inner membrane family protein [Staphylococcus epidermidis FRI909] gi|329726156|gb|EGG62628.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU144] Length = 290 Score = 97.4 bits (240), Expect = 6e-18, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 105/264 (39%), Gaps = 43/264 (16%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394 +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ M+ Sbjct: 32 FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 91 Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + ++++YK +++NP+ GC PIL+Q+P+ +Y Sbjct: 92 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 151 Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ L + P + W +L D +I + F Sbjct: 152 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 189 Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556 IQ K P + M++ P++ ++ + L +YWS S + ++Q I Sbjct: 190 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANI 249 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580 A+ + + ++ S Sbjct: 250 YYSKLAKKEVQPFIEKYEREHNPS 273 >gi|312870531|ref|ZP_07730649.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus oris PB013-T2-3] gi|311093928|gb|EFQ52254.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus oris PB013-T2-3] Length = 314 Score = 97.4 bits (240), Expect = 6e-18, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 104/252 (41%), Gaps = 35/252 (13%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ++AKPM LM + +L N+G AI++ V V+ + P+ Q + + K+ Sbjct: 36 YDYMAKPMQHLMEWLAAHLGNNYGWAIIVIVVVVRSILLPVMFSQMKKSTITQEKMAKVR 95 Query: 398 EL--------REKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 L + + + M+ LY+ +NI+ GC P+L+Q+PVF A+Y I Sbjct: 96 PLIKELSEKQKAAKTPEEQAAVSQQMMALYRDNNISITGGIGCLPLLIQLPVFAALYAAI 155 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ HA F+G +A P+ I + + + ++ + P Sbjct: 156 RYSPDLYHAEFFG----IALGKPSIILAVLSFIAYAAQSYLGLIGVP------------- 198 Query: 508 SPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 K Q + WM P + F + AGL +Y+ + +I+Q ++ + Sbjct: 199 ---EEQKKQMKMAIWMSPFMTFFISLTSSAGLGLYFFIGGLFAILQTLMVN---AYRPRI 252 Query: 567 IDRLRSTFSKNY 578 R+ + Sbjct: 253 RKRIEEESKNHP 264 >gi|303280353|ref|XP_003059469.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] gi|226459305|gb|EEH56601.1| cytochrome oxidase biogenesis family [Micromonas pusilla CCMP1545] Length = 240 Score = 97.4 bits (240), Expect = 6e-18, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 99/257 (38%), Gaps = 42/257 (16%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E++ + + ++ YF+ + AI T +++ FPL Q S M Sbjct: 1 EVIAIAADSWITTAGLMYVIEYFHLAHGMEWYAAIAAATCVMRVCAFPLTIMQQKSAGKM 60 Query: 390 KNIQPKIDELRE------KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +P++ L+E + + + ++ H+++P P+L Q PVF + Sbjct: 61 HLAKPEMTALQESINEARRAGEHERAARLGRVFAIWSKHDVHPAKMLAPLLFQAPVFISF 120 Query: 444 YKVISISLE----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 Y IS E MR + W +DL+ ADPT PII SL Sbjct: 121 YFAISRMAEGLPSMRD-GGFAWFQDLSIADPTF-------------------ALPIISSL 160 Query: 500 SMFIQMKMSPPPAD--KGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + ++ +P Q + W + V V +SFP+G+ +YW SNV S Q Sbjct: 161 TFLAAVEFAPQNPAVKSSQREMTKWGLRALGVAMVPLTASFPSGVFVYWITSNVFSFAQT 220 Query: 554 AVIM-----KMHGAEIG 565 ++ + G Sbjct: 221 VLLRVPFAKRAMGIPED 237 >gi|145221425|ref|YP_001132103.1| putative inner membrane protein translocase component YidC [Mycobacterium gilvum PYR-GCK] gi|145213911|gb|ABP43315.1| 60 kDa inner membrane insertion protein [Mycobacterium gilvum PYR-GCK] Length = 376 Score = 97.4 bits (240), Expect = 6e-18, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 93/271 (34%), Gaps = 39/271 (14%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 + + + +++M ++ + + KQ Sbjct: 2 SFNWMSLDFIYYPVSAIMWVWYKAFAFLLGPTNFFAWALSVMFLVFTLRAILYKPFVKQI 61 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +T M+ +QP+I L++K+ Q + M +L + H NP+ GC P+L Q+PVF + Sbjct: 62 RTTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQVPVFLGL 120 Query: 444 YKVISIS--------------LEMRH-APFWGWIKDLAAADPTNIFT------------L 476 Y + E R ++ D+ N+F L Sbjct: 121 YHTLMSFNRTQTGIGRLGLSVEENRQLGNYFFSATDVQHFLDANLFGAPLGATMIQQHGL 180 Query: 477 FGILPFYLPGFMHVGI-WPIIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWMPV 525 F + VG+ I+ ++ + + SP A Q ++ P+ Sbjct: 181 DAFTEFNRTSVIIVGVPIMILAGIATYFNSRASVARQSPEAAANPQTAMMNKLALYVFPL 240 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V P +I+YW +N+ + QQ + Sbjct: 241 GVVVGGPFLPLAIIMYWLANNIWTFGQQHYV 271 >gi|223718097|ref|NP_005006.3| mitochondrial inner membrane protein OXA1L [Homo sapiens] Length = 495 Score = 97.4 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ + + +L + AI TVF + L FPL A + N P+I Sbjct: 178 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 237 Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ + LY K H I + Q P+F + + + Sbjct: 238 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 297 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + I P+ ++ +M+ ++ Sbjct: 298 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 338 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 339 LGAETGVQSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 389 >gi|2546979|emb|CAA05127.1| OXA1L [Homo sapiens] gi|119586653|gb|EAW66249.1| oxidase (cytochrome c) assembly 1-like [Homo sapiens] Length = 495 Score = 97.4 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ + + +L + AI TVF + L FPL A + N P+I Sbjct: 178 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 237 Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ + LY K H I + Q P+F + + + Sbjct: 238 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 297 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + I P+ ++ +M+ ++ Sbjct: 298 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 338 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 339 LGAETGVQSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 389 >gi|315446823|ref|YP_004079702.1| preprotein translocase subunit YidC [Mycobacterium sp. Spyr1] gi|315265126|gb|ADU01868.1| preprotein translocase subunit YidC [Mycobacterium sp. Spyr1] Length = 371 Score = 97.4 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 93/265 (35%), Gaps = 39/265 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + + + +++M ++ + + KQ +T M Sbjct: 3 LDFIYYPVSAIMWVWYKAFAFLLGPTNFFAWALSVMFLVFTLRAILYKPFVKQIRTTRQM 62 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L++K+ Q + M +L + H NP+ GC P+L Q+PVF +Y + Sbjct: 63 QELQPQIKALQKKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQVPVFLGLYHTLMS 121 Query: 450 S--------------LEMRH-APFWGWIKDLAAADPTNIFT------------LFGILPF 482 E R ++ D+ N+F L F Sbjct: 122 FNRTQTGIGRLGLSVEENRQLGNYFFSATDVQHFLDANLFGAPLGATMIQQHGLDAFTEF 181 Query: 483 YLPGFMHVGI-WPIIMSLSMFIQMK-----MSPPPADKGQAMIL-----NWMPVVFVFAL 531 + VG+ I+ ++ + + SP A Q ++ P+ V Sbjct: 182 NRTSVIIVGVPIMILAGIATYFNSRASVARQSPEAAANPQTAMMNKLALYVFPLGVVVGG 241 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVI 556 P +I+YW +N+ + QQ + Sbjct: 242 PFLPLAIIMYWLANNIWTFGQQHYV 266 >gi|309379511|emb|CBX21877.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 250 Score = 97.4 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 62/222 (27%), Gaps = 15/222 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ A+++ I+ W+ + P+ + Q + A Sbjct: 1 MDF-KRLTAFFAIALAIMIGWEKMFPAPQTAPAPGQAAQQQRQTVATASAEAALAPATP- 58 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + ++ I+ K L L Y + P V L + Y Sbjct: 59 ----------ITVTTDAVQAVIDEKSGDLRRLTLLKYKATGDEHKPFV--LFGDGKEYTY 106 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL-DEHYL 179 A+ + + N L + ++L N + ++ + YL Sbjct: 107 VAQSELLDAQGNNVLKGIGFTAPQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKGSYL 166 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 + + N S RI+R + Q + + Sbjct: 167 VNVRFDIANTGGKPANLSADYRIVRDRSQPEGQGYFTRSYLG 208 >gi|329735686|gb|EGG71969.1| putative stage III sporulation protein J [Staphylococcus epidermidis VCU028] Length = 293 Score = 97.0 bits (239), Expect = 7e-18, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 105/264 (39%), Gaps = 43/264 (16%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394 +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ M+ Sbjct: 32 FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 91 Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + ++++YK +++NP+ GC PIL+Q+P+ +Y Sbjct: 92 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 151 Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ L + P + W +L D +I + F Sbjct: 152 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 189 Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556 IQ K P + M++ P++ ++ + L +YWS S + ++Q I Sbjct: 190 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANI 249 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580 A+ + + ++ S Sbjct: 250 YYSKLAKKEVQPFIEKYEREHNPS 273 >gi|163790185|ref|ZP_02184618.1| integral membrane protein [Carnobacterium sp. AT7] gi|159874460|gb|EDP68531.1| integral membrane protein [Carnobacterium sp. AT7] Length = 307 Score = 97.0 bits (239), Expect = 7e-18, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 96/255 (37%), Gaps = 39/255 (15%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ------ 393 + + +++ G++G++I+ T+ V+L+ PL Q + + Sbjct: 39 FLVVPTQQVIIQLADFFGGSYGLSIIAITLAVRLIIMPLNLSQSKKSIIQQEKMALIKPE 98 Query: 394 --PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISI 449 + + Q+ ++ LYK +N++ L GC P+L+Q+PVF A+++ I++ Sbjct: 99 MDEVQKKQKAAVTAEEKAAAQQELMSLYKDNNMSMLGGIGCLPLLIQMPVFTAMFQAINL 158 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S E+ ++ F G F + + I F+Q +S Sbjct: 159 STEISNSTFLG----------------FSLGNQNIA-------LAIAAGAVYFVQSYVSM 195 Query: 510 PPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 Q ++ P++ + + PAGL +YW + ++ Q + + Sbjct: 196 IGLPDEQKKQMRTMMYVSPIMILMVSFTSPAGLGLYWFVGGIFAVFQTIITN--FIFKPR 253 Query: 566 LIDRLRSTFSKNYNS 580 + +L Sbjct: 254 IKAQLEEEARNRPAK 268 >gi|85662644|gb|AAI12332.1| Oxidase (cytochrome c) assembly 1-like [Homo sapiens] Length = 496 Score = 97.0 bits (239), Expect = 7e-18, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ + + +L + AI TVF + L FPL A + N P+I Sbjct: 178 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 237 Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ + LY K H I + Q P+F + + + Sbjct: 238 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 297 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + I P+ ++ +M+ ++ Sbjct: 298 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 338 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 339 LGAETGVQSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 389 >gi|148985978|ref|ZP_01819031.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP3-BS71] gi|147921951|gb|EDK73076.1| ascorbate-specific PTS system enzyme IIC [Streptococcus pneumoniae SP3-BS71] Length = 274 Score = 97.0 bits (239), Expect = 7e-18, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F+ F + F + + G+ I+L TV ++ + P+ + Q V++ M+ Sbjct: 29 DITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQ 88 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 89 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L + D T + PI+ ++ F+ + Sbjct: 149 SR-VDFLKTGQFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 187 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240 >gi|116872811|ref|YP_849592.1| OxaA-like protein precursor [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741689|emb|CAK20813.1| oxaA/SpoIIIJ family membrane protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 275 Score = 97.0 bits (239), Expect = 8e-18, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 39/253 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393 Y I +M + N+G+AI++TT+ ++ L PL + + M++ Sbjct: 36 TYLIQPFTSFIMFVASFVGDNYGVAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95 Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449 L+ + +QK M+ +Y +NINPL GC P+L+Q+P+ A Y I Sbjct: 96 EIDEIQARLKRATSKEEQATIQKEMMTVYSKYNINPLQMGCLPLLIQMPILMAFYYAIRG 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S E+ + + W +L +D + II L Q +S Sbjct: 156 SSEIA-SHTFLWF-NLGESDM---------------------VLAIIAGLVYLAQYFVSM 192 Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-- 563 Q + + P++ +F + P+ L +YW+ + Q + K++ + Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHP 252 Query: 564 -IGLIDRLRSTFS 575 I ++++ F Sbjct: 253 EIKVMEQEEKEFE 265 >gi|307710908|ref|ZP_07647334.1| membrane protein oxaA 1 [Streptococcus mitis SK321] gi|307617264|gb|EFN96438.1| membrane protein oxaA 1 [Streptococcus mitis SK321] Length = 274 Score = 97.0 bits (239), Expect = 8e-18, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 100/233 (42%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ D F+ F + F + + G+ I+L TV ++ L P+ + Q V++ M+ Sbjct: 29 DITADSADFWSKFVYFFAEIIRFLSFDISIGVGIILFTVLIRTLLLPVFQVQMVASRKMQ 88 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 89 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI L G + PI+ ++ F+ + Sbjct: 149 SR-VDFLKTGHFLWIN--------------------LGGVDTTLVLPILAAVFTFLSTWL 187 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240 >gi|293364737|ref|ZP_06611454.1| SpoIIIJ family protein [Streptococcus oralis ATCC 35037] gi|291316187|gb|EFE56623.1| SpoIIIJ family protein [Streptococcus oralis ATCC 35037] Length = 312 Score = 97.0 bits (239), Expect = 9e-18, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 77/212 (36%), Gaps = 30/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 86 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 145 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+Q+P F AIY + + + F G DL + + GIL + G+ Sbjct: 146 ILIQMPFFSAIYFAAQYTDGVASSTFLG--IDLGSP-SLLLVAFAGILYYLQSLLSLHGV 202 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 D+ Q ++ P++ V PA + +YW + Sbjct: 203 -------------------EDEMQRDQLKRMIYVSPLMIVVFSFFAPASVTLYWVVGGFM 243 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 I+QQ ++ + L ++R F+KN Sbjct: 244 MILQQFIVN--YVVRPKLRKKVREEFAKNPPK 273 >gi|307702984|ref|ZP_07639931.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037] gi|307623377|gb|EFO02367.1| membrane protein oxaA 1 [Streptococcus oralis ATCC 35037] Length = 309 Score = 96.6 bits (238), Expect = 9e-18, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 77/212 (36%), Gaps = 30/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+Q+P F AIY + + + F G DL + + GIL + G+ Sbjct: 143 ILIQMPFFSAIYFAAQYTDGVASSTFLG--IDLGSP-SLLLVAFAGILYYLQSLLSLHGV 199 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 D+ Q ++ P++ V PA + +YW + Sbjct: 200 -------------------EDEMQRDQLKRMIYVSPLMIVVFSFFAPASVTLYWVVGGFM 240 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 I+QQ ++ + L ++R F+KN Sbjct: 241 MILQQFIVN--YVVRPKLRKKVREEFAKNPPK 270 >gi|307110546|gb|EFN58782.1| hypothetical protein CHLNCDRAFT_140542 [Chlorella variabilis] Length = 426 Score = 96.6 bits (238), Expect = 9e-18, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 95/230 (41%), Gaps = 23/230 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANM-------K 390 + + + L++ + +G +IM+ T ++L P+ Q +T M + Sbjct: 156 SWLPTRLIQGLLTGLHGALGLEWWQSIMVATCAMRLATLPIMIMQIKNTYRMSLARPEME 215 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + E + K Q+ ++ ++K +N NP +L+Q P+F + + Sbjct: 216 VLMNHVKEEQAKGNMEAALEHQQHVMAVWKKYNCNPFKSMAGMLVQAPIFIGFFSALRGF 275 Query: 451 LEMR----HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W DL ADPT + L F + I + + +Q + Sbjct: 276 AAHKVPSLTEGGALWFTDLTVADPTYMLPALAGLSF---------LLTIELGAADGMQGQ 326 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 PP K ++ + +V A ++ PA + +YWS SNV S++Q +++ Sbjct: 327 --PPEMQKKLKNVMRVVALVIPLASTALPASVFMYWSASNVFSLLQTSLL 374 >gi|298253034|ref|ZP_06976826.1| preprotein translocase subunit YidC [Gardnerella vaginalis 5-1] gi|297532429|gb|EFH71315.1| preprotein translocase subunit YidC [Gardnerella vaginalis 5-1] Length = 337 Score = 96.6 bits (238), Expect = 9e-18, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 107/256 (41%), Gaps = 21/256 (8%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + + + + + + ++ +I+ + V F Sbjct: 8 ILDNGFLGWFYKILTPVEWFMTQIMSLFHKLLTLLGMNEVGFSWVFSIVFLVLVVHACIF 67 Query: 377 PLAKKQYVSTANMKNIQPKIDELRE----KFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 P K M+ I PKI ++++ K + + +Q+ M++LY+ + NP C P Sbjct: 68 PAFIKSIKGMRKMQAIAPKIKKIQQKYKGKNDPASKEAMQREMMKLYQDNKANPAGSCLP 127 Query: 433 ILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGI------LPFYLP 485 +++Q P F +I+ +S+ R D+A A +FG+ + Sbjct: 128 MMIQGPAFMSIWYTLSVIPFIARGKHAALGAFDIATAQQFVKTRVFGVGVADTFMTTAGA 187 Query: 486 GFMHVGIWPIIMSLSMFIQM----KMSPPPADKG------QAMILNWMPVVFVFALSSFP 535 G + + I+ ++M +M+ + + PP K Q +++ P+++VF+ + P Sbjct: 188 GKIVIVIFVVLMCAAMWYMQFNNIRKNLPPESKQGSQYTVQKLMMWGFPLIYVFSAFAMP 247 Query: 536 AGLIIYWSWSNVISIV 551 +++YW +NVI+++ Sbjct: 248 FAMLVYWLVNNVINML 263 >gi|317130857|ref|YP_004097139.1| membrane protein insertase, YidC/Oxa1 family [Bacillus cellulosilyticus DSM 2522] gi|315475805|gb|ADU32408.1| membrane protein insertase, YidC/Oxa1 family [Bacillus cellulosilyticus DSM 2522] Length = 274 Score = 96.6 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 101/253 (39%), Gaps = 42/253 (16%) Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 P E + Y + +++ + GN+G +I+L T+ +++ PL KQY + Sbjct: 33 NEPIDENTAGFFNHYVVYPFSYLIKFFAAMFNGNYGASIILMTILLRMALMPLMLKQYKN 92 Query: 386 TANMKN--------IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILL 435 MK +Q ++ ++K Q + Q+ ++ +Y+ HN NP+ GC P+++ Sbjct: 93 QIVMKEKMSVIQPEMQKINEQYKDKKDQESQRKKQQELMAVYQKHNFNPIASMGCLPMII 152 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 Q+P+ Y I + E+ + W +L D I P Sbjct: 153 QLPILMGFYWAIMRTPEIASHS-FLWF-NLGETD---------------------LILPF 189 Query: 496 IMSLSMFIQMKMSPPP--ADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVIS 549 + + F+Q K+S GQ ++ M PV+ A L +YW+ + Sbjct: 190 LAAFVYFVQFKVSQIGVIPQPGQENMMKMMGFITPVMMGVFSFGMAAALPLYWTIGGLFL 249 Query: 550 IVQQAV---IMKM 559 I Q + I K Sbjct: 250 IFQTLLSKAIYKK 262 >gi|156401497|ref|XP_001639327.1| predicted protein [Nematostella vectensis] gi|156226455|gb|EDO47264.1| predicted protein [Nematostella vectensis] Length = 308 Score = 96.6 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 94/238 (39%), Gaps = 37/238 (15%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ-------SPPQVLQ 412 + +I+ T+ + L FPL K + A + N++P+++E++ + + Sbjct: 41 WVWSIVAATIAFRTLMFPLIVKSQANAARLNNVKPELEEVQAQLRDLMNSNNAIGKAAAS 100 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468 + QLYK ++ +P+ L+Q+P+F + ++ ++ +E W DL A Sbjct: 101 ARLQQLYKDNDCHPIKSIIAPLVQVPLFISFFVGLRRMANLPVESFKEGGLFWFTDLTAY 160 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMI---LNWM 523 DP + PI+ SL+M +++ + + M Sbjct: 161 DPYF-------------------VLPIVCSLTMLASIELGGEAGVSNPQMQHMKTFFRVM 201 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 V + + FPA + YW SN+ S+ Q +++ A KN +Q Sbjct: 202 CVAMIPLTAQFPAAIFTYWVTSNLFSLGQVSLL--KVKAVREYFGIPEMKVHKNLPAQ 257 >gi|223933965|ref|ZP_03625923.1| 60 kDa inner membrane insertion protein [Streptococcus suis 89/1591] gi|302024559|ref|ZP_07249770.1| membrane protein OxaA 1 precursor [Streptococcus suis 05HAS68] gi|330833639|ref|YP_004402464.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3] gi|223897357|gb|EEF63760.1| 60 kDa inner membrane insertion protein [Streptococcus suis 89/1591] gi|329307862|gb|AEB82278.1| 60 kDa inner membrane insertion protein [Streptococcus suis ST3] Length = 270 Score = 96.6 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 103/253 (40%), Gaps = 28/253 (11%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + + ++ + GI I+L T+ ++ L PL + Q S+ M+ + Sbjct: 28 SQSTDAWDRLIYWFASIIQFLSINGQ-IGIGIILFTILIRTLLLPLFQIQMNSSRKMQEL 86 Query: 393 QPKIDELREKFKQSPP---QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 QP++ +L+ ++ + Q L +A LYK + ++ A P+ +Q+P+ A+++ ++ Sbjct: 87 QPQLKKLQAEYPGTDMESRQQLYEATQALYKENGVSMRASMIPLFIQMPILLALFQALTR 146 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 +E + W+ +L DP I PI+ ++ F+ ++ Sbjct: 147 -VEALKVGHFLWL-NLGEPDPFF-------------------ILPIMAAVFTFLSSWLTN 185 Query: 510 PPA--DKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 A I+ + MPV+ F + +G+ +YW+ SN + Q V Sbjct: 186 KSAIEKNMAMTIMTYVMPVMIFFFAVAAASGVALYWTVSNAYQVAQTLVFNNPFKIIAER 245 Query: 567 IDRLRSTFSKNYN 579 ++ + + Sbjct: 246 QAKIDAEKERQAK 258 >gi|283782566|ref|YP_003373320.1| membrane protein insertase, YidC/Oxa1 family [Gardnerella vaginalis 409-05] gi|283441507|gb|ADB13973.1| membrane protein insertase, YidC/Oxa1 family [Gardnerella vaginalis 409-05] Length = 337 Score = 96.6 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 106/256 (41%), Gaps = 21/256 (8%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + + + + + ++ +I+ + V F Sbjct: 8 ILDNGFLGWFYKILTPVEWLMTQIMSLFHKLLTLLGMNEVGFSWVFSIVFLVLVVHACIF 67 Query: 377 PLAKKQYVSTANMKNIQPKIDELRE----KFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 P K M+ I PKI ++++ K + + +Q+ M++LY+ + NP C P Sbjct: 68 PAFIKSIKGMRKMQAIAPKIKKIQQKYKGKNDPASKEAMQREMMKLYQDNKANPAGSCLP 127 Query: 433 ILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTNIFTLFGI------LPFYLP 485 +++Q P F +I+ +S+ R D+A A +FG+ + Sbjct: 128 MMIQGPAFMSIWYTLSVIPFIARGKHAALGAFDIATAQQFVKTRVFGVGVADTFMTTAGA 187 Query: 486 GFMHVGIWPIIMSLSMFIQM----KMSPPPADKG------QAMILNWMPVVFVFALSSFP 535 G + + I+ ++M +M+ + + PP K Q +++ P+++VF+ + P Sbjct: 188 GKIVIVIFVVLMCAAMWYMQFNNIRKNLPPESKQGSQYTVQKLMMWGFPLIYVFSAFAMP 247 Query: 536 AGLIIYWSWSNVISIV 551 +++YW +NVI+++ Sbjct: 248 FAMLVYWLVNNVINML 263 >gi|282876503|ref|ZP_06285369.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis SK135] gi|281294755|gb|EFA87283.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis SK135] Length = 290 Score = 96.6 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 105/264 (39%), Gaps = 43/264 (16%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394 +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ M+ Sbjct: 32 FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 91 Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + ++++YK +++NP+ GC PIL+Q+P+ +Y Sbjct: 92 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 151 Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ L + P + W +L D +I + F Sbjct: 152 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 189 Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556 IQ K P + M++ P++ ++ + L +YWS S + ++Q + Sbjct: 190 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANV 249 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580 A+ + + ++ S Sbjct: 250 YYSKLAKKEVQPFIEKYEREHNPS 273 >gi|37589026|gb|AAH01669.2| OXA1L protein [Homo sapiens] Length = 437 Score = 96.6 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ + + +L + AI TVF + L FPL A + N P+I Sbjct: 120 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 179 Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ + LY K H I + Q P+F + + + Sbjct: 180 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 239 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + I P+ ++ +M+ ++ Sbjct: 240 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 280 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 281 LGAETGVQSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 331 >gi|27468607|ref|NP_765244.1| lipoprotein precursor [Staphylococcus epidermidis ATCC 12228] gi|38502988|sp|Q8CMK8|OXAA2_STAES RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|27316154|gb|AAO05288.1|AE016749_234 lipoprotein precursor [Staphylococcus epidermidis ATCC 12228] Length = 290 Score = 96.6 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 104/263 (39%), Gaps = 43/263 (16%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394 +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ M+ Sbjct: 32 FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 91 Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + ++++YK +++NP+ GC PIL+Q+P+ +Y Sbjct: 92 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 151 Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ L + P + W +L D +I + F Sbjct: 152 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 189 Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556 IQ K P + M++ P++ ++ + L +YWS S + ++Q I Sbjct: 190 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANI 249 Query: 557 MKMHGAEIGLIDRLRSTFSKNYN 579 A+ + + ++ Sbjct: 250 YYSKLAKKEVQPFIEKYEREHNP 272 >gi|114652024|ref|XP_001156985.1| PREDICTED: oxidase (cytochrome c) assembly 1-like isoform 4 [Pan troglodytes] gi|114652026|ref|XP_509840.2| PREDICTED: mitochondrial inner membrane protein OXA1L isoform 5 [Pan troglodytes] Length = 435 Score = 96.2 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ + + +L + AI TVF + L FPL A + N P+I Sbjct: 118 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 177 Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ + LY K H I + Q P+F + + + Sbjct: 178 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 237 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + I P+ ++ +M+ ++ Sbjct: 238 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 278 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 279 LGAETGVQSSDLQWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 329 >gi|38372882|sp|Q15070|OXA1L_HUMAN RecName: Full=Mitochondrial inner membrane protein OXA1L; AltName: Full=Hsa; AltName: Full=OXA1Hs; AltName: Full=Oxidase assembly 1-like protein; Short=OXA1-like protein; Flags: Precursor gi|619491|emb|CAA56712.1| OXA1Hs [Homo sapiens] gi|194389996|dbj|BAG60514.1| unnamed protein product [Homo sapiens] Length = 435 Score = 96.2 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ + + +L + AI TVF + L FPL A + N P+I Sbjct: 118 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 177 Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ + LY K H I + Q P+F + + + Sbjct: 178 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 237 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + I P+ ++ +M+ ++ Sbjct: 238 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 278 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 279 LGAETGVQSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 329 >gi|256847493|ref|ZP_05552939.1| inner membrane insertion protein [Lactobacillus coleohominis 101-4-CHN] gi|256716157|gb|EEU31132.1| inner membrane insertion protein [Lactobacillus coleohominis 101-4-CHN] Length = 315 Score = 96.2 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 100/254 (39%), Gaps = 33/254 (12%) Query: 339 FYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ++AKPM LM + +L+ N+G AI++ + V+L+ P+ Q + M+ I Sbjct: 40 YEYLAKPMQHLMEWLASLMGNNYGWAIIVIVIVVRLILLPVMMSQMKKSTLMQEKMSMIQ 99 Query: 398 ELREKFKQSPPQVLQKA--------MIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 + ++ M+ LY+ +NI+ GC P+L+Q+PVF A+Y I Sbjct: 100 PQLREIQRQQKAAKTPEEQAAATQAMMALYRDNNISMTGGIGCLPLLIQLPVFAALYAAI 159 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ HA F +P P M + + ++ M Sbjct: 160 RYSPDLYHA-------------------TFLGIPLGKPSIMLAILSFVAYLFQGWLSMIG 200 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P M++ PV+ F + AGL +Y+ + +I+Q +I L Sbjct: 201 MPKNQQAQMRMMMLMSPVMIFFISMTSSAGLGLYFFIGGLFAILQTWLIN---AYRPHLK 257 Query: 568 DRLRSTFSKNYNSQ 581 ++ + Sbjct: 258 KQIAQEVKNRPAPK 271 >gi|329734155|gb|EGG70473.1| putative stage III sporulation protein J [Staphylococcus epidermidis VCU045] Length = 282 Score = 96.2 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 104/263 (39%), Gaps = 43/263 (16%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394 +F +PM L+ + N NFG+AI++ +F++L+ P Y ++ M+ Sbjct: 32 FFNTFVQPMKHLLQWLGNDVFHNNFGLAIIVLVLFIRLILLPFMLSNYKNSHMMREKMKV 91 Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + ++++YK +++NP+ GC PIL+Q+P+ +Y Sbjct: 92 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPILIQMPIIMGLY 151 Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ L + P + W +L D +I + F Sbjct: 152 FVLKDKLVNGLSEHPHFLWF-NLTKPDIW---------------------ITVIAGVLYF 189 Query: 503 IQ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--I 556 IQ K P + M++ P++ ++ + L +YWS S + ++Q I Sbjct: 190 IQAVVSSKTMPQEQRQMGYMMMVISPIMIIWISLQASSALGLYWSVSALFLVIQTHFANI 249 Query: 557 MKMHGAEIGLIDRLRSTFSKNYN 579 A+ + + ++ Sbjct: 250 YYSKLAKKEVQPFIEKYEREHNP 272 >gi|332365176|gb|EGJ42939.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK1059] Length = 271 Score = 96.2 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 29/232 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I L+EK+ + Sbjct: 46 RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + +LYK +NP A P+ +Q+PV A+++ ++ ++ + W+ +L A Sbjct: 106 TALAEETQKLYKEKGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525 DPT I P++ +L F+ +S + G +++ +PV Sbjct: 164 DPTF-------------------ILPLLAALFTFLSTWLSNKALPERNGGMTVMMYLLPV 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 F +G+ +YW+ SN +VQ ++ + +I + + Sbjct: 205 AIFFFAFYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254 >gi|114652028|ref|XP_001156923.1| PREDICTED: oxidase (cytochrome c) assembly 1-like isoform 3 [Pan troglodytes] Length = 408 Score = 96.2 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ + + +L + AI TVF + L FPL A + N P+I Sbjct: 118 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 177 Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ + LY K H I + Q P+F + + + Sbjct: 178 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 237 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + I P+ ++ +M+ ++ Sbjct: 238 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 278 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 279 LGAETGVQSSDLQWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 329 >gi|224053781|ref|XP_002297976.1| inner membrane protein [Populus trichocarpa] gi|222845234|gb|EEE82781.1| inner membrane protein [Populus trichocarpa] Length = 459 Score = 95.8 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 89/236 (37%), Gaps = 34/236 (14%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E+ I YF + ++ ++ N+ +I++TT+ ++ PL Q +T + Sbjct: 130 EVAIAAADSYFPVAALQHVIDAVHSFTGFNWWASIIVTTLLIRGATVPLLINQLKATTKL 189 Query: 390 KNIQPKIDELRE----KFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIY 444 ++P ++E+R+ K + ++ L+K + ++PL + +Q P+F + + Sbjct: 190 TLMRPHLEEIRQQMSDKAMDPMALAEGQKQMKKLFKEYGVSPLTPLKGLFIQGPIFVSFF 249 Query: 445 KVISISLE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 IS E + W DL D I PI+ L+ Sbjct: 250 LAISNMTEKVPSFKSGGAYWFLDLTTPDSLY-------------------ILPILTGLTF 290 Query: 502 FIQMKMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 +I ++ + P + V V FP + YW SN+ S+ Sbjct: 291 WITVECNMQEGLEGNPIAATMKKVSRVFAVASVPLTMGFPNAIFCYWVTSNLFSLF 346 >gi|261884151|ref|ZP_06008190.1| putative inner membrane protein translocase component YidC [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 146 Score = 95.8 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 62/142 (43%), Positives = 100/142 (70%), Gaps = 1/142 (0%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 +I++GWF FIAKPMF+L+S+ +N +GN+G AI+ T+ ++++ FPL K VS + Sbjct: 1 MVDVIEYGWFTFIAKPMFLLLSWLHNYIGNWGFAIVALTIVIRIVLFPLTYKGMVSMNKL 60 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K++ PK+ E++ K+K P + L +++LYK + NP+ GC PIL+QIP+FFAIY+V+ Sbjct: 61 KDLAPKMKEIQAKYKGDPSK-LNAHVMELYKKNGANPMGGCLPILIQIPIFFAIYRVLLN 119 Query: 450 SLEMRHAPFWGWIKDLAAADPT 471 ++E++ AP+ WIKDLA + Sbjct: 120 AIELKGAPWIFWIKDLAIMEQA 141 >gi|315038841|ref|YP_004032409.1| hypothetical protein LA2_08525 [Lactobacillus amylovorus GRL 1112] gi|312276974|gb|ADQ59614.1| hypothetical protein LA2_08525 [Lactobacillus amylovorus GRL 1112] Length = 322 Score = 95.8 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 98/268 (36%), Gaps = 47/268 (17%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYVS 385 G + ++ + + + + G I++ T V+L+ PL Q Sbjct: 33 APHSGIYGWVYQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNK 92 Query: 386 TANMKNIQPKIDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCWPIL 434 + + ++ ++ K Q+ +LY + ++ GC P++ Sbjct: 93 SVRQQEKMARLQPQMKLIQTAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGMGCLPLI 152 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ + IY+ + S ++ H+ F+G L+ + Sbjct: 153 IQLPIMWGIYQAVFYSPQLAHSTFFG--ISLSQK---------------------SVVLA 189 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISI 550 I+ ++ IQ +S + Q + M P++ +F SF L +YW+ N+++I Sbjct: 190 IVATVFTVIQGYISLIGIPEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVTI 249 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 +QQ ++ + + + Sbjct: 250 IQQLIVT--FVLTPKVKQHVAEELKEKP 275 >gi|332523130|ref|ZP_08399382.1| putative stage III sporulation protein J [Streptococcus porcinus str. Jelinkova 176] gi|332314394|gb|EGJ27379.1| putative stage III sporulation protein J [Streptococcus porcinus str. Jelinkova 176] Length = 270 Score = 95.8 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 102/233 (43%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F + + + G+ I+L T+ ++LL PL Q S+ M+ Sbjct: 24 DISAHSTSGWDQLVYFFAKSVQWLSFNRSIGVGIILFTILIRLLLMPLFNIQIKSSQKMQ 83 Query: 391 NIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++QP++ +++ K+ + LYK + +NP A +P+++Q+P+ A+++ + Sbjct: 84 DLQPELKKIQAKYPGKDSESRMALADETQALYKNNGVNPYASLFPLVIQMPIMIALFQAL 143 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ + W +LA D H+ I PI+ +L F+ + Sbjct: 144 TRVPFLK-TGTFLW-AELAQHD-------------------HLYILPILAALFTFLSSWL 182 Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + A + ++ MPV+ F +G+++YW SN + Q ++ Sbjct: 183 TNLAAKEKNMVMTVMTYMMPVMIFFMGFKLASGVVLYWVISNAFQVFQLLLLN 235 >gi|327468457|gb|EGF13942.1| stage III sporulation protein J [Streptococcus sanguinis SK330] Length = 271 Score = 95.8 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 29/232 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ +QP I L+EK+ + Sbjct: 46 RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEVQPHIKRLQEKYPGKDMESR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + +LYK +NP A P+ +Q+PV A+++ ++ ++ + W+ +L A Sbjct: 106 TALAEETQKLYKEMGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525 DPT I P++ +L F+ +S + G +++ +PV Sbjct: 164 DPTF-------------------ILPLLAALFTFLSTWLSNKALPERNGGMTVMMYLLPV 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 F +G+ +YW+ SN +VQ ++ + +I + + Sbjct: 205 AIFFFAFYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254 >gi|332018694|gb|EGI59266.1| Mitochondrial inner membrane protein OXA1L [Acromyrmex echinatior] Length = 442 Score = 95.8 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 106/259 (40%), Gaps = 40/259 (15%) Query: 340 YFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + L+ + + NL + +AI++TT+ + L FPL K + + N PKI + Sbjct: 145 WTPTGIVHNLLEFMHINLDMPWWLAIVITTICARSLLFPLVIKTQKNVIRLTNHMPKIQD 204 Query: 399 LREKFKQSPPQVLQK-------AMIQLYKTHNINPLAGCWPILLQIPVF----FAIYKVI 447 + ++ M++ KT+ I+ L+Q PVF FA+ K+ Sbjct: 205 FNIRLTEARNCGDHMQSAQIATEMMKYMKTNKISFTQNVMMPLVQAPVFISFFFALRKMA 264 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++ +E + W+KDL DP I PII S++MFI +++ Sbjct: 265 NLPVESLKDGGFLWLKDLTVYDPYY-------------------IMPIITSVTMFITIEL 305 Query: 508 SPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV-----IMK 558 + ++ + +P V + + FP ++ YW +N +S++Q I K Sbjct: 306 GTDGTNIYAMGVMRYVLRALPFVALPFMLHFPGTILTYWVATNTVSLIQTGFLKIPRIKK 365 Query: 559 MHGAEIGLIDRLRSTFSKN 577 G + +++ Sbjct: 366 ALGMPSMIKRNPKASTKSK 384 >gi|301300964|ref|ZP_07207129.1| sodium pump decarboxylase, gamma subunit [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851431|gb|EFK79150.1| sodium pump decarboxylase, gamma subunit [Lactobacillus salivarius ACS-116-V-Col5a] Length = 260 Score = 95.8 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 90/241 (37%), Gaps = 32/241 (13%) Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS---- 406 L G++G +I++ T V+L+ P+ Q + I K ++ Sbjct: 3 WLSGVLGGSYGWSIIVITFIVRLIMMPIMINQSKKATIQQEKIAMIRPQLAKIQEQQKNA 62 Query: 407 ----PPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 +AM++LY+ +NI+ + GC P+L+Q+P+F A+Y I S E+ Sbjct: 63 KTPEERNAASQAMMKLYQENNISMVGGIGCLPLLIQMPIFAALYAAIQYSPEL------- 115 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 T F + F V + +I +L ++ P K ++ Sbjct: 116 ------------SKTTFMGINLGHRSFTFVVLTFVIYALQGWLSTLGLPEEQKKQMQSMI 163 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 PV+ PAGL +Y+ + + +Q +I M + ++ Sbjct: 164 IVSPVMLTGMTYISPAGLGLYFFIGGIFACIQTLIINFM---RPRIRKDIKKELKNKPIK 220 Query: 581 Q 581 + Sbjct: 221 E 221 >gi|315303048|ref|ZP_07873756.1| membrane protein OxaA 2 [Listeria ivanovii FSL F6-596] gi|313628583|gb|EFR97008.1| membrane protein OxaA 2 [Listeria ivanovii FSL F6-596] Length = 275 Score = 95.8 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 36/238 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393 Y I +M + N+G+AI++TT+ ++ L PL + + M++ Sbjct: 36 TYLIQPFTSFIMFVASFVGDNYGVAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95 Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449 L+ + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I Sbjct: 96 EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S E+ + + W +L + D + II L Q +S Sbjct: 156 SSEIA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192 Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q + + P++ +F + P+ L +YW+ + Q + K++ + Sbjct: 193 IGYSPEQKKQMRIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNK 250 >gi|149003816|ref|ZP_01828644.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69] gi|147758150|gb|EDK65153.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69] Length = 274 Score = 95.8 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 102/233 (43%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F+ F + F + + G+ I+L TV + + P+ + Q V++ M+ Sbjct: 29 DITAESADFWSKLVYFFAKIIRFLSFDISIGVGIILFTVLICTVLLPVFQVQMVASRKMQ 88 Query: 391 NIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 QP+I LRE++ + L++ M +++K + WPIL+Q+PV A+++ + Sbjct: 89 EAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQAL 148 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ + WI +L + D T + PI+ ++ F+ + Sbjct: 149 SR-VDFLKTGHFLWI-NLGSVDTT-------------------LVLPILAAVFTFLSTWL 187 Query: 508 SPPP---ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 S + ++ +PV+ P G+ +YW+ SN ++Q + Sbjct: 188 SNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLN 240 >gi|327472485|gb|EGF17916.1| ParB/SpoJ family partitioning protein [Streptococcus sanguinis SK408] Length = 271 Score = 95.4 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 103/232 (44%), Gaps = 29/232 (12%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-- 409 F + G+ GI I+L T+ ++ + P+ + Q S+ ++ QP I L+EK+ + Sbjct: 46 RFLSFGGSKGIGIILFTLIIRTVLLPVFQFQTTSSRKLQEAQPHIKRLQEKYPGKDMESR 105 Query: 410 -VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 L + +LYK +NP A P+ +Q+PV A+++ ++ ++ + W+ +L A Sbjct: 106 TALAEETQKLYKEMGVNPYASFIPLFIQMPVLLALFQALTR-VDFMKTGHFLWL-NLGAT 163 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPV 525 DPT I P++ +L F+ +S + G +++ +PV Sbjct: 164 DPTF-------------------ILPLLAALFTFLSTWLSNKALPERNGGMTVMMYLLPV 204 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 F +G+ +YW+ SN +VQ ++ + +I + + Sbjct: 205 AIFFFAFYAASGVALYWAVSNAYQVVQTLLL--SNPFKIIAEREAKERSERQ 254 >gi|112830|sp|P22833|OXAA_PROMI RecName: Full=Inner membrane protein oxaA gi|150874|gb|AAA83954.1| ORF1; putative [Proteus mirabilis] Length = 237 Score = 95.4 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 70/242 (28%), Gaps = 18/242 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N + IAL + WQ + + + Q P+ + Sbjct: 1 MDSQRNL-LFIALLFVSFLIWQQWEGDKVSQNTTTTTQVSQQADMPSSDSLAVTG----- 54 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + + + +K L IN +G D+ +L Y +++S +P L + + Y Sbjct: 55 --NSNEQAKLITVKTDVLDLRINTQGGTIDEADLLAYPAELNSKTPFRLL--ETTPQFLY 110 Query: 121 FAELDYVSTANNIELPNSNTVWNLIS---GKILTPTTPIKLVFKNANNILFERTISLDEH 177 A+ + + G+ + I Sbjct: 111 QAQSGLIGPDGPDQKSRPVYSATQQEFILGENQDELRVPMTFVNEEGVKFVKTFILKKGQ 170 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMR-----HKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 Y I V N + + + G++ + T ++ F + A + Sbjct: 171 YDIGIEYKVENPTDKTLTMNFYGQLKQSVKLPEHRDTGSSNFALHTYRGAAYSSDETNYK 230 Query: 233 KY 234 KY Sbjct: 231 KY 232 >gi|297694703|ref|XP_002824610.1| PREDICTED: mitochondrial inner membrane protein OXA1L [Pongo abelii] Length = 435 Score = 95.4 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 83/231 (35%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ + + +L + AI TVF + L FPL A + N P+I Sbjct: 118 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 177 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ + K H I + Q P+F + + + Sbjct: 178 KFSSRIREAKLAGDHIEYYKASSEMAFYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 237 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + I P+ ++ +M+ ++ Sbjct: 238 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 278 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 279 LGAETGVQSSDLQWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 329 >gi|296141904|ref|YP_003649147.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella paurometabola DSM 20162] gi|296030038|gb|ADG80808.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella paurometabola DSM 20162] Length = 390 Score = 95.4 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 99/276 (35%), Gaps = 55/276 (19%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + ++++ + ++ + + +Q +T M+ QP++ LR+K+ Q L M +L Sbjct: 39 WALSVIFLVLTLRAILYKPFVRQIRTTRQMQEFQPQMQALRKKY-GKDRQKLALEMQKLQ 97 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVI------------------SISLEMRH-APFWG 460 K H NPL GC P LLQ+PVF ++ V+ + E RH A ++ Sbjct: 98 KEHGFNPLLGCLPALLQVPVFIGLFHVLRSFNRMAGGATQMFGSPDMTAYETRHTANYFF 157 Query: 461 WIKDLA------------------------AADPTNIFTLFGILPFYLPGFMHVGI-WPI 495 D+ A P NI + F + + + I Sbjct: 158 SATDVQSFLDARLFGVPLSSYVQEPVAQFQAFMPVNINNDYIAPNFEKWQILALSVPLMI 217 Query: 496 IMSLSMFIQMKMSPPPA-----DKGQAMILN-----WMPVVFVFALSSFPAGLIIYWSWS 545 + +L+ + S D Q I+N P+ + P ++IYW Sbjct: 218 VAALATHFNARASIARQPVASLDNPQTAIMNRLMLWVFPIGVLVGGFFLPVAILIYWVTQ 277 Query: 546 NVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 N+ + QQ ++ E RL + Sbjct: 278 NIWTYCQQHIVFGKLDKEDEEKKRLAQEKRAENAPK 313 >gi|259503597|ref|ZP_05746499.1| membrane protein OxaA 2 [Lactobacillus antri DSM 16041] gi|259168421|gb|EEW52916.1| membrane protein OxaA 2 [Lactobacillus antri DSM 16041] Length = 314 Score = 95.4 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 104/252 (41%), Gaps = 35/252 (13%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ++AKPM LM + +L N+G AI++ V V+ + P+ Q + + K+ Sbjct: 36 YDYMAKPMQHLMEWLAAHLGNNYGWAIIVIVVVVRTILLPVMFSQMKKSTITQEKMAKVQ 95 Query: 398 EL--------REKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 L + + + M+ LY+ +NI+ GC P+L+Q+PVF A+Y I Sbjct: 96 PLIKELSEKQKAAQTPEEQAAVSQQMMALYRDNNISITGGIGCLPLLIQLPVFAALYAAI 155 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S ++ HA F+G +A P+ + + + + ++ + P Sbjct: 156 RYSPDLYHAEFFG----IALGKPSILLAVLSFIAYAAQSYLGLVGVP------------- 198 Query: 508 SPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 K Q + WM P + F + AGL +Y+ + +I+Q ++ + Sbjct: 199 ---EEQKKQMKMAIWMSPFMTFFISLTSSAGLGLYFFIGGLFAILQTIMVN---AYRPRI 252 Query: 567 IDRLRSTFSKNY 578 R+ + Sbjct: 253 RQRIEEESKNHP 264 >gi|296139617|ref|YP_003646860.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella paurometabola DSM 20162] gi|296027751|gb|ADG78521.1| membrane protein insertase, YidC/Oxa1 family [Tsukamurella paurometabola DSM 20162] Length = 287 Score = 95.4 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 88/242 (36%), Gaps = 48/242 (19%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + ++++ V+ + + ++ ++P++D+LR K PQ L +L Sbjct: 32 WALSVVFLVFTVRAVLLWPGLVSARAGRRLERMRPELDKLRRKH-GKDPQKLALETQKLQ 90 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVI-------------------------------- 447 + H + PL GC P L QIPVFF +Y V+ Sbjct: 91 REHGVRPLLGCLPALAQIPVFFGLYHVLRSFNRTGTGLGQLGLTPDQNANTANYVFSATD 150 Query: 448 ---SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 +S + AP I ++ F FG +P I L+ I Sbjct: 151 VQSFLSARLFGAPISVSIS--SSDTVLASFAQFGGIPSLTTIAAVAIPLMAIACLATHIN 208 Query: 505 MKMSP--PPADKGQAM--------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 + S D AM +L MP+ + + P +++YW +NV + QQ Sbjct: 209 ARFSVRHQAIDPTSAMQSDLMRTLMLWVMPLGSIISGPILPIAILLYWVANNVWTYGQQQ 268 Query: 555 VI 556 ++ Sbjct: 269 LV 270 >gi|91095209|ref|XP_968413.1| PREDICTED: similar to cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Tribolium castaneum] gi|270015977|gb|EFA12425.1| hypothetical protein TcasGA2_TC001816 [Tribolium castaneum] Length = 436 Score = 95.1 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 93/258 (36%), Gaps = 41/258 (15%) Query: 314 EFPTIHHYEKDLAIPRF-EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 I L P F + + IA+ F + NL + AI++ T+ ++ Sbjct: 113 TVSEIVSQVNALGEPTFASLGLGGKTPVGIAQTCFEYLHI--NLGVPWWEAIVIGTLVIR 170 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNIN 425 + FPL + A M N P++ ++ K ++ + ++ K +N Sbjct: 171 ICLFPLVIIAQRNAAKMNNYMPQLQAIQLKMTEARQSGNQLEVARYSQELMIFMKEKQLN 230 Query: 426 PLAGCWPILLQIPVFFAIYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 PL L Q+PVF + + + +E W DL D + Sbjct: 231 PLKNMIVPLAQMPVFVSFFMALREMSNVPIESLRTGGLWWFTDLTVPDQYFLM------- 283 Query: 482 FYLPGFMHVGIWPIIMSLSMFI-------QMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 P+I S ++F K+S +L +PV+ + +F Sbjct: 284 ------------PLITSATLFATIELGTDTAKLSSQNLQTM-KYVLRAVPVIVLPFTINF 330 Query: 535 PAGLIIYWSWSNVISIVQ 552 P ++ YW SN IS++Q Sbjct: 331 PGAILCYWVSSNFISLLQ 348 >gi|126438349|ref|YP_001074040.1| putative inner membrane protein translocase component YidC [Mycobacterium sp. JLS] gi|126238149|gb|ABO01550.1| 60 kDa inner membrane insertion protein [Mycobacterium sp. JLS] Length = 367 Score = 95.1 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 94/270 (34%), Gaps = 39/270 (14%) Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 +++ + + +++M ++ + + +Q Sbjct: 2 FNWFSLDIIYYPVSAIMWVWYKAFAFLLGPDNFFAWALSVMFLVFTLRAILYKPFVRQIR 61 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +T M+ +QP+I L++K+ Q + M +L K H NP+ GC P+L QIPVF +Y Sbjct: 62 TTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQKEHGFNPILGCLPMLAQIPVFLGLY 120 Query: 445 KVISI-------------SLE--------MRHAPFWGWIKD---LAAADPTNIFTLFGIL 480 V+ S+E + A G D A + G+ Sbjct: 121 HVLMSFNRTQTGIGRLGLSVEENRSLPNYLFSATDVGHFLDANLFGAPLGATMIQQHGLE 180 Query: 481 PFY----LPGFMHVGIWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMPVV 526 F + + ++ ++ + +P A Q ++ P+ Sbjct: 181 AFTEFNRVAVVVVGVPIMLLAGIATHFNSRASVARQTPEAAANPQTALMNKLALYVFPLG 240 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V P +I+YW +N+ + QQ + Sbjct: 241 VVVGGPFLPLAVIMYWLANNIWTYGQQHYV 270 >gi|125974852|ref|YP_001038762.1| protein translocase subunit yidC [Clostridium thermocellum ATCC 27405] gi|256003891|ref|ZP_05428878.1| 60 kDa inner membrane insertion protein [Clostridium thermocellum DSM 2360] gi|281418693|ref|ZP_06249712.1| membrane protein insertase, YidC/Oxa1 family [Clostridium thermocellum JW20] gi|125715077|gb|ABN53569.1| protein translocase subunit yidC [Clostridium thermocellum ATCC 27405] gi|255992229|gb|EEU02324.1| 60 kDa inner membrane insertion protein [Clostridium thermocellum DSM 2360] gi|281407777|gb|EFB38036.1| membrane protein insertase, YidC/Oxa1 family [Clostridium thermocellum JW20] gi|316941974|gb|ADU76008.1| membrane protein insertase, YidC/Oxa1 family [Clostridium thermocellum DSM 1313] Length = 291 Score = 95.1 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 106/268 (39%), Gaps = 60/268 (22%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 G++G+AI+L TVF+KLL PL+ KQY S+ M+ +QP I E++ K+K PQ + ++ Sbjct: 21 FGSYGLAIILFTVFIKLLLLPLSIKQYKSSLKMQEMQPLIQEIQRKYKN-DPQKQSEELM 79 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL----------------EMRHAPFWG 460 LYK HN +P +GC +Q+P+ ++Y VI L ++ A Sbjct: 80 NLYKEHNFSPASGCLTSFIQLPIIVSLYYVIREPLTYMFNMTKDQIEALVNQLNQAANGL 139 Query: 461 W-IKDLAAADPT----------------NIFTLFGILP-----FYLPGFMHVGIWPIIMS 498 I + I G +P + ++ + + P++ Sbjct: 140 PQINTRSIYFQIEAALRSGKLDVVEELGFIKFDLGKIPKLNFTEDVATYLPLLLIPVLAI 199 Query: 499 LSMFIQMKMSPPPAD---------------------KGQAMILNWMPVVFVFALSSFPAG 537 ++ + KM ++ PV+ PA Sbjct: 200 VATYFSSKMMMKRTQSLRSSTNSKKSKNQSQDDMTAAMNKSMMWIAPVMTGIISFQAPAA 259 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEIG 565 L +YW SNV I+Q+ +I K + Sbjct: 260 LGLYWLTSNVFQIIQEFIINKFIMKKKE 287 >gi|57089985|ref|XP_537362.1| PREDICTED: similar to Inner membrane protein OXA1L, mitochondrial precursor (Oxidase assembly 1-like protein) (OXA1-like protein) (OXA1Hs) (Hsa) isoform 1 [Canis familiaris] Length = 435 Score = 95.1 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 85/231 (36%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ + + NL + AI TV + L FPL K A + N P+I Sbjct: 117 SYTPVGLIQNLLEFMHVNLGLPWWGAIAACTVLARCLVFPLIVKGQREAAKIHNHLPEIQ 176 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ Q + K H++ L Q P+F + + + Sbjct: 177 KFSTRIREAKLAGDQAEFYKASSEMTFYQKKHDVKLFRPLILPLTQAPIFISFFIALREM 236 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF---- 502 + W +DL +DPT I P++++ +M+ Sbjct: 237 ANLPVPSLQTGGLLWFQDLTLSDPTY-------------------ILPLVVTATMWGVLE 277 Query: 503 IQMKMSPPPAD-KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + +D + ++ MP+ + FP + +YW SN+ S+ Q Sbjct: 278 LGAETGMQSSDLQWMRNLIRVMPLAVLPITIHFPTAVFMYWLSSNMFSLGQ 328 >gi|28193182|emb|CAD62333.1| unnamed protein product [Homo sapiens] Length = 419 Score = 95.1 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ + + +L + AI TVF + L FPL A + N P+I Sbjct: 102 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 161 Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ + LY K H I + Q P+F + + + Sbjct: 162 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 221 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + I P+ ++ +M+ ++ Sbjct: 222 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 262 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 263 LGAETGVQSSDLQWMRNVIRMMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 313 >gi|331265654|ref|YP_004325284.1| Preprotein translocase subunit YidC2 [Streptococcus oralis Uo5] gi|326682326|emb|CBY99943.1| Preprotein translocase subunit YidC2 [Streptococcus oralis Uo5] Length = 309 Score = 95.1 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 77/212 (36%), Gaps = 30/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQKRLKEATTQEEKLEAQQALWDTQKEHGISVFGGVGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+Q+P F AIY + + + F G +L + + GIL + G+ Sbjct: 143 ILIQMPFFSAIYFAAQYTDGVASSTFLG--INLGSP-SLLLVAFAGILYYLQSLLSLHGV 199 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 D+ Q ++ P++ V PA + +YW + Sbjct: 200 -------------------EDEMQREQLKKMIYMSPLMIVVFSFFAPASVTLYWVVGGFM 240 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 I+QQ ++ + L ++R F+KN Sbjct: 241 MILQQFIVN--YVVRPKLRKKVREEFAKNPPK 270 >gi|307710735|ref|ZP_07647163.1| membrane protein oxaA 1 [Streptococcus mitis SK321] gi|307617341|gb|EFN96513.1| membrane protein oxaA 1 [Streptococcus mitis SK321] Length = 308 Score = 95.1 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 76/209 (36%), Gaps = 24/209 (11%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 ILLQ+P F AIY + + A + G +P P + V Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551 I+ L + + + Q + +M P++ V PA + +YW + I+ Sbjct: 184 AGILYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 QQ ++ + L ++R +KN Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPPK 270 >gi|301781256|ref|XP_002926062.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial inner membrane protein OXA1L-like [Ailuropoda melanoleuca] Length = 637 Score = 95.1 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 84/231 (36%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ + + NL + AI T+ + L FPL K A + N P+I Sbjct: 321 SYTPVGLIQNLLEFMHVNLGLPWWGAIAACTILARCLVFPLIVKGQREAAKIHNHLPEIQ 380 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ + K ++I L Q P+F + + + Sbjct: 381 KFSTRMREAKLAGDHAEFYKASSEMTFYQKKYDIKLFRPLILPLTQAPIFISFFIALREM 440 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + + P++++ +M+ ++ Sbjct: 441 ANLPVPSLQTGGLLWFQDLTLSDP-------------------IYVLPLVVTATMWGVLE 481 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + ++ MP+ + FP + +YW SN+ S+VQ Sbjct: 482 LGAETGVQSSDLQWMRNVIRVMPLAVLPITIHFPTAVFMYWLSSNMFSLVQ 532 >gi|194016676|ref|ZP_03055289.1| Oxa1 family cytochrome oxidase biogenesis protein [Bacillus pumilus ATCC 7061] gi|194011282|gb|EDW20851.1| Oxa1 family cytochrome oxidase biogenesis protein [Bacillus pumilus ATCC 7061] Length = 272 Score = 95.1 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ------ 393 YF+ +++ ++G++IM T+ V+LL FPL Q+ M+ Sbjct: 38 YFVQPFSELIIWLANFFHDDYGLSIMFVTLIVRLLIFPLFANQFKKQRVMQEKMALVKPQ 97 Query: 394 --PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISIS 450 +L++ + + LQ M+++YK +N+NPL GC P+L+QIP+ Y I + Sbjct: 98 IDEIQSKLKKTKEPEKQKELQMEMMKVYKENNVNPLAMGCLPMLIQIPIVLGFYSAIRST 157 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSM-FIQMKMS 508 E+ T+ F F + L + G + ++ F + + Sbjct: 158 PEIA----------------THSFLWFNLGQTDLLVAIFAGAMYFLQFYVTQRFAKQSGT 201 Query: 509 PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 A QA ++ P++ +F + PA L +YW S ++ +Q ++ Sbjct: 202 QTEAALKQAKVMGMIFPIMMLFISINAPAALPLYWMTSGLLLTIQTIILN 251 >gi|114652033|ref|XP_001156862.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] Length = 419 Score = 95.1 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ + + +L + AI TVF + L FPL A + N P+I Sbjct: 102 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHNHLPEIQ 161 Query: 398 ELREKFKQSPPQVLQKAM------IQLY-KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ + LY K H I + Q P+F + + + Sbjct: 162 KFSSRIREAKLAGDHIEYYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 221 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + I P+ ++ +M+ ++ Sbjct: 222 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 262 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 263 LGAETGVQSSDLQWMRNVIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 313 >gi|15807143|ref|NP_295872.1| inner membrane protein, 60 kDa [Deinococcus radiodurans R1] gi|38503229|sp|Q9RSH5|OXAA_DEIRA RecName: Full=Membrane protein oxaA gi|6459947|gb|AAF11697.1|AE002049_2 inner membrane protein, 60 kDa, putative [Deinococcus radiodurans R1] Length = 428 Score = 95.1 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 75/399 (18%), Positives = 144/399 (36%), Gaps = 59/399 (14%) Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 + + + ++ + V N Q+ G P+ Sbjct: 36 NRQDAVFRYAQNGVQVTKTITLHPRNFKVDVRTEVRN-GPAQVNMLFPGLGKADNPRVQA 94 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 G Q + G S+ +Y+ ++++ H I + Sbjct: 95 VPVGGQPASVQGSGTLSVQNIQYAALQENPSQIAH---------------ALIVRPQQGT 139 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFE 331 + A A + G + +G E P + Sbjct: 140 KVDVQLTGGPQGLVTATLPATSSLEVYGGKNELIHLYQSGYTELPGLFQPN--------- 190 Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +F I+ + LM Y ++GN+G+ IM T+ ++L+ +PL + Q +TA M+ Sbjct: 191 ------FFGQISLLIVKLMEALYKVIGNWGLVIMALTILLRLVMWPLMQAQGRTTARMQL 244 Query: 392 IQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +QP E++EK+K + +Q M QL + + +NP GC+ LL PV A++ I Sbjct: 245 VQPLQKEIQEKYKGKTDPESQRAMQMEMAQLMRDYQVNPA-GCFSTLLPFPVLIALWATI 303 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 E + W+ DLA DP I + + F+++G ++ + Sbjct: 304 RN-FEF--DSGFLWLPDLATPDPFYILAVIYL-------FVNLGQL--------YVSTRK 345 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 +P Q ++ +VF++ +FP+G+ +Y S Sbjct: 346 TPEMF--RQQAMIY---LVFLYFALTFPSGVTLYIILST 379 >gi|226308231|ref|YP_002768191.1| OxaA family protein [Rhodococcus erythropolis PR4] gi|226187348|dbj|BAH35452.1| putative OxaA family protein [Rhodococcus erythropolis PR4] Length = 318 Score = 95.1 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 99/268 (36%), Gaps = 46/268 (17%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + +F L+S + + ++++ +K L F KQ + M+ +QP+I L+ Sbjct: 14 WFWHKVFSLISGSPDNGVVWALSVVFLVFTLKALLFKPFVKQVRTQLVMQKLQPQIKALQ 73 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEMRHAP 457 +K+ Q L M +L K HN +PL GC P+L+Q PVF +Y V+ + H P Sbjct: 74 KKYSG-DRQKLTVEMAKLQKEHNYSPLLGCLPMLVQAPVFIGLYHVLRSFNRTGAASHVP 132 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFY--------------------------------LP 485 F + ++ AD N F + Sbjct: 133 FLSPTEPMSVADNANTANYFFSASDVQSFLDAKLFGAPLSAMISSPAAQLEAFGDVSRIS 192 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----QAMILN-----WMPVVFVFALSSFP 535 + I +++ + S Q I+N PV + + P Sbjct: 193 IILVAVPLMIFAAVATHFTSRASIARQVDTGTVNPQTAIMNKLALWVFPVGVIAFGAFAP 252 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +++Y+ +N ++ QQ ++ AE Sbjct: 253 VAILLYFVSNNCWTLGQQHLVYGRIAAE 280 >gi|321475104|gb|EFX86068.1| hypothetical protein DAPPUDRAFT_193442 [Daphnia pulex] Length = 444 Score = 95.1 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 82/231 (35%), Gaps = 37/231 (16%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + ++ + + V I + V+ L FPL K + A M N P++ Sbjct: 135 MSPSGLIQSILEWLHIGVDLPWWGCIAIGVFTVRTLMFPLVIKAQRNAAKMTNNMPQLQV 194 Query: 399 LREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---- 447 L++K + + + K +NPL L+Q PVF + + + Sbjct: 195 LQQKMTDARQAGNAMEAARMGYEIQSFMKEKGLNPLKNLMVPLIQAPVFMSFFFALKGMA 254 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + +E W DL DP I P++ S++++ M++ Sbjct: 255 NAPVESMQYGGLFWFSDLTVCDPYY-------------------ILPMLTSVTVWATMEL 295 Query: 508 SPPPADKGQAMI------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 A +P + +F ++ YW +NVIS+VQ Sbjct: 296 GADSAKLSSQGFPLLIYFFRAIPFIMFPITMNFSGAILCYWLTTNVISLVQ 346 >gi|302753696|ref|XP_002960272.1| hypothetical protein SELMODRAFT_73518 [Selaginella moellendorffii] gi|300171211|gb|EFJ37811.1| hypothetical protein SELMODRAFT_73518 [Selaginella moellendorffii] Length = 315 Score = 95.1 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 34/248 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 F + A +++ + + ++I LTTV V+ + PL Q STA ++P Sbjct: 42 SESFPWTAAVQYVIYATHVVTGLPWWLSIALTTVAVRTMVLPLVIYQVKSTARFALLRPD 101 Query: 396 IDELREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +++++ +Q+ ++ M +L+ H +P LLQ P+F + + Sbjct: 102 LEKIKVDMEQANYDPVALAENKRKMAELFAKHKTDPFTPLIGALLQGPIFMCFFFGLRTM 161 Query: 451 LE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 E W DL D I P I + + I +++ Sbjct: 162 AEKMDSFKEGGAFWFTDLTTPDELY-------------------ILPFITTATFLITVEL 202 Query: 508 SP------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-MKMH 560 + P K IL M V+F+ + FP L YW SN+ S++Q A++ K Sbjct: 203 NAVDGMQGQPNQKTMKNILRGMGVLFLPLTAQFPKALFCYWVTSNLWSMLQGALLRNKKF 262 Query: 561 GAEIGLID 568 A + + D Sbjct: 263 KAYLDIPD 270 >gi|322387091|ref|ZP_08060702.1| SpoIIIJ family protein [Streptococcus infantis ATCC 700779] gi|321142078|gb|EFX37572.1| SpoIIIJ family protein [Streptococcus infantis ATCC 700779] Length = 308 Score = 95.1 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 79/209 (37%), Gaps = 24/209 (11%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQTRLKEAETQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+Q+P F AIY + + A F G +A P+ I F + +Y+ + Sbjct: 143 LLIQMPFFSAIYFAAQHTEGVSEASFLG----IALGSPSWILIAFAGILYYVQSLLS--- 195 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF-PAGLIIYWSWSNVISIV 551 + + + Q + +M + + S F PA + +YW + I+ Sbjct: 196 ---LHGV---------EDETQREQLKKMIYMSPMMIVMFSIFSPASVTLYWVVGGFMMIL 243 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 QQ ++ + L ++R +KN Sbjct: 244 QQFIVN--YIIRPKLRKKVREELAKNPPK 270 >gi|328774396|gb|EGF84433.1| hypothetical protein BATDEDRAFT_34302 [Batrachochytrium dendrobatidis JAM81] Length = 459 Score = 94.7 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 38/266 (14%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI--AIML 366 A + AI + L G + +F ++S + + I+ Sbjct: 153 IAEGTNIGDLMTETALGAITQIGDLHSLGLANYNPVGLFQIISEYIYVYSGMPWWATIVA 212 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ-------SPPQVLQKAMIQLY 419 T+ V+++ PLA K V+ A + ++PK D ++++ + Q + + Q+Y Sbjct: 213 LTIIVRIIVAPLAIKAQVAGAVLGGLRPKTDPIQKRVTHLRSIGDTAGSQREAQKLFQVY 272 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFT 475 K +NI+PL ++Q P+F +++ I E+ +GWI +L+ ADPT Sbjct: 273 KDNNISPL-SIGWGIIQAPIFISVFMAIKYMAELPVPGFTTGGFGWITNLSTADPTY--- 328 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAMILNWM---PVVFVFA 530 I PI+ S+ M I M+ SP + AMIL M VV + Sbjct: 329 ----------------ILPILSSIGMLITMEYSPKLTGSPPQSAMILMIMRVASVVMIPV 372 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVI 556 + P + IY S V+ I Q ++ Sbjct: 373 MGGLPVAVFIYMLVSTVLMIAQMYLL 398 >gi|213418901|ref|ZP_03351967.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 246 Score = 94.7 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 75/255 (29%), Gaps = 23/255 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-----KPQTATNTFGVQEGFIAVLGDKSL 229 Y + +V N + S G++ + T ++ F + A Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAYSTPDE 228 Query: 230 VEQKYSDIEKSSISN 244 +KY + N Sbjct: 229 KYEKYKFDTIADNEN 243 >gi|157692895|ref|YP_001487357.1| OxaA-like protein precursor [Bacillus pumilus SAFR-032] gi|157681653|gb|ABV62797.1| Oxa1 family cytochrome oxidase biogenesis protein [Bacillus pumilus SAFR-032] Length = 272 Score = 94.7 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 28/230 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ------ 393 YF+ +++ ++G++IM T+ V+LL FPL Q+ M+ Sbjct: 38 YFVQPFSELIIWLANFFHDDYGLSIMFVTLIVRLLIFPLFANQFKKQRVMQEKMALVKPQ 97 Query: 394 --PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISIS 450 +L++ + + LQ M+++YK +N+NPL GC P+L+QIP+ Y I + Sbjct: 98 IDDIQSKLKKTKEPEKQKELQMEMMKVYKENNVNPLAMGCLPMLIQIPIVLGFYSAIRST 157 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSM-FIQMKMS 508 E+ T+ F F + L + G + ++ F + + Sbjct: 158 PEIA----------------THSFLWFNLGQTDLLVAIFAGAMYFLQFYVTQRFAKQSGT 201 Query: 509 PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 A QA ++ P++ +F + PA L +YW S ++ VQ ++ Sbjct: 202 QTEAALKQAKVMGMIFPIMMLFISINAPAALPLYWMTSGLLLTVQTIILN 251 >gi|306824473|ref|ZP_07457819.1| SpoIIIJ family protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433260|gb|EFM36230.1| SpoIIIJ family protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 312 Score = 94.7 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 79/212 (37%), Gaps = 30/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K + I+ GC+P Sbjct: 86 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKENGISMFGGVGCFP 145 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+Q+P F AIY + + + F G ++ P+ I F + +YL + + Sbjct: 146 ILIQMPFFSAIYFAAQYTDGVSSSTFLG----ISLGSPSMILVAFAGILYYLQSLLSLH- 200 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 D+ Q ++ P++ V PA + +YW + Sbjct: 201 -----------------GVEDEMQRDQLKKMIYMSPLMIVVFSLFAPASVTLYWVVGGFM 243 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 I+QQ ++ + L ++R F+KN Sbjct: 244 MILQQFIVN--YVVRPKLRQKVREEFAKNPPK 273 >gi|148985555|ref|ZP_01818744.1| OxaA-like protein precursor [Streptococcus pneumoniae SP3-BS71] gi|168492050|ref|ZP_02716193.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC0288-04] gi|147922275|gb|EDK73396.1| OxaA-like protein precursor [Streptococcus pneumoniae SP3-BS71] gi|183573673|gb|EDT94201.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC0288-04] gi|301800737|emb|CBW33385.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae OXC141] Length = 308 Score = 94.3 bits (232), Expect = 5e-17, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 76/209 (36%), Gaps = 24/209 (11%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 ILLQ+P F AIY + + A + G +P P + V Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ L + + + Q + +M P++ V PA + +YW + I+ Sbjct: 184 AGVLYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 QQ ++ + L ++R +KN Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPPK 270 >gi|15901798|ref|NP_346402.1| OxaA-like protein precursor [Streptococcus pneumoniae TIGR4] gi|111658862|ref|ZP_01409483.1| hypothetical protein SpneT_02000033 [Streptococcus pneumoniae TIGR4] gi|148993164|ref|ZP_01822730.1| OxaA-like protein precursor [Streptococcus pneumoniae SP9-BS68] gi|149007450|ref|ZP_01831093.1| OxaA-like protein precursor [Streptococcus pneumoniae SP18-BS74] gi|168489980|ref|ZP_02714179.1| membrane protein OxaA 2 [Streptococcus pneumoniae SP195] gi|182684910|ref|YP_001836657.1| oxaA-like protein precursor [Streptococcus pneumoniae CGSP14] gi|225859731|ref|YP_002741241.1| OxaA-like protein precursor [Streptococcus pneumoniae 70585] gi|225861793|ref|YP_002743302.1| OxaA-like protein precursor [Streptococcus pneumoniae Taiwan19F-14] gi|303254101|ref|ZP_07340216.1| OxaA-like protein precursor [Streptococcus pneumoniae BS455] gi|303260348|ref|ZP_07346318.1| oxaA-like protein precursor [Streptococcus pneumoniae SP-BS293] gi|303262496|ref|ZP_07348438.1| oxaA-like protein precursor [Streptococcus pneumoniae SP14-BS292] gi|303265127|ref|ZP_07351040.1| oxaA-like protein precursor [Streptococcus pneumoniae BS397] gi|303266011|ref|ZP_07351906.1| oxaA-like protein precursor [Streptococcus pneumoniae BS457] gi|303268057|ref|ZP_07353858.1| oxaA-like protein precursor [Streptococcus pneumoniae BS458] gi|307128174|ref|YP_003880205.1| membrane protein OxaA 2 [Streptococcus pneumoniae 670-6B] gi|38503145|sp|Q97NP5|OXAA2_STRPN RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|254778167|sp|C1CTN0|OXAA_STRZT RecName: Full=Membrane protein oxaA; Flags: Precursor gi|14973482|gb|AAK76042.1| SpoIIIJ family protein [Streptococcus pneumoniae TIGR4] gi|147761022|gb|EDK67991.1| OxaA-like protein precursor [Streptococcus pneumoniae SP18-BS74] gi|147928138|gb|EDK79156.1| OxaA-like protein precursor [Streptococcus pneumoniae SP9-BS68] gi|182630244|gb|ACB91192.1| oxaA-like protein precursor [Streptococcus pneumoniae CGSP14] gi|183571634|gb|EDT92162.1| membrane protein OxaA 2 [Streptococcus pneumoniae SP195] gi|225721166|gb|ACO17020.1| membrane protein OxaA 2 [Streptococcus pneumoniae 70585] gi|225727287|gb|ACO23138.1| membrane protein OxaA 2 [Streptococcus pneumoniae Taiwan19F-14] gi|301802653|emb|CBW35419.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae INV200] gi|302598934|gb|EFL65965.1| OxaA-like protein precursor [Streptococcus pneumoniae BS455] gi|302636396|gb|EFL66889.1| oxaA-like protein precursor [Streptococcus pneumoniae SP14-BS292] gi|302638514|gb|EFL68979.1| oxaA-like protein precursor [Streptococcus pneumoniae SP-BS293] gi|302642417|gb|EFL72763.1| oxaA-like protein precursor [Streptococcus pneumoniae BS458] gi|302644452|gb|EFL74704.1| oxaA-like protein precursor [Streptococcus pneumoniae BS457] gi|302645344|gb|EFL75578.1| oxaA-like protein precursor [Streptococcus pneumoniae BS397] gi|306485236|gb|ADM92105.1| membrane protein OxaA 2 [Streptococcus pneumoniae 670-6B] gi|327389140|gb|EGE87486.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA04375] gi|332071953|gb|EGI82441.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA17545] gi|332072057|gb|EGI82544.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA17570] Length = 308 Score = 94.3 bits (232), Expect = 5e-17, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 76/209 (36%), Gaps = 24/209 (11%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 ILLQ+P F AIY + + A + G +P P + V Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ L + + + Q + +M P++ V PA + +YW + I+ Sbjct: 184 AGVLYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 QQ ++ + L ++R +KN Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPPK 270 >gi|322375832|ref|ZP_08050343.1| SpoIIIJ family protein [Streptococcus sp. C300] gi|321279100|gb|EFX56142.1| SpoIIIJ family protein [Streptococcus sp. C300] Length = 309 Score = 94.3 bits (232), Expect = 5e-17, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 78/212 (36%), Gaps = 30/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQKRLKEATTQEEKLEAQQALWDTQKEHGISVFGGVGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IL+Q+P F AIY + + + + I + P+ I F + +YL + + Sbjct: 143 ILIQMPFFSAIYFAAQYTDGVA-SSTFLGINLGS---PSMILVAFAGILYYLQSLLSLH- 197 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 D+ Q ++ P++ V PA + +YW + Sbjct: 198 -----------------GVEDEMQREQLKKMIYMSPLMIVVFSFFAPASVTLYWVVGGFM 240 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 I+QQ ++ + L ++R F+KN Sbjct: 241 MILQQFIVN--YVVRPKLRKKVREEFAKNPPK 270 >gi|149012436|ref|ZP_01833467.1| OxaA-like protein precursor [Streptococcus pneumoniae SP19-BS75] gi|168494784|ref|ZP_02718927.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC3059-06] gi|221232700|ref|YP_002511854.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae ATCC 700669] gi|298230172|ref|ZP_06963853.1| OxaA-like protein precursor [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254778|ref|ZP_06978364.1| OxaA-like protein precursor [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503746|ref|YP_003725686.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus pneumoniae TCH8431/19A] gi|147763492|gb|EDK70428.1| OxaA-like protein precursor [Streptococcus pneumoniae SP19-BS75] gi|183575319|gb|EDT95847.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC3059-06] gi|220675162|emb|CAR69746.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae ATCC 700669] gi|298239341|gb|ADI70472.1| Oxa1 family cytochrome oxidase biogenesis protein [Streptococcus pneumoniae TCH8431/19A] Length = 308 Score = 94.3 bits (232), Expect = 5e-17, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 76/209 (36%), Gaps = 24/209 (11%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 ILLQ+P F AIY + + A + G +P P + V Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ L + + + Q + +M P++ V PA + +YW + I+ Sbjct: 184 AGVLYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 QQ ++ + L ++R +KN Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPPK 270 >gi|154486340|ref|ZP_02027747.1| hypothetical protein BIFADO_00149 [Bifidobacterium adolescentis L2-32] gi|154084203|gb|EDN83248.1| hypothetical protein BIFADO_00149 [Bifidobacterium adolescentis L2-32] Length = 344 Score = 94.3 bits (232), Expect = 5e-17, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 115/272 (42%), Gaps = 34/272 (12%) Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP-MFMLMSYFYNLVGNFGIAIMLTTVFV 371 + + + + ++W +A FM+M + ++ ++I+ + V Sbjct: 2 NQDQFLLDSGFWGWLYKLLYPVEWLMTQIMAGFHRFMVMLGMNEIGFSWVMSIVFLVIVV 61 Query: 372 KLLFFPLAKKQYVSTANMK--------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 + FPL K M+ +Q ++ + K + + LQ+ M++LY+ ++ Sbjct: 62 QACVFPLFYKSMKGMRKMQAQMAVLQPKMQRIQNKYKGKNDPASKEALQREMMKLYQDND 121 Query: 424 INPLAGC---WPILLQIPVFFAIYKVISISLEM-----RHAPFWGWIKDLAAADPTNIFT 475 NP+ GC P+ +Q PVF ++ +S + R+ G D+A A Sbjct: 122 ANPMGGCTSMLPMFVQGPVFMCMFYTLSAIPYIARGKFRNGSGLGAF-DIATAKQFTSTN 180 Query: 476 LFGIL------PFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMIL 520 +FG+ + G + +GI+ +M +++ K + + ++ Sbjct: 181 VFGVNVAENFTTADIHGKIIIGIFVALMCFCLWLMQYNSMKRNMAQSAANKQTEMMQKMM 240 Query: 521 NWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551 WM P++++F+ + P +++YW +N+ +++ Sbjct: 241 LWMFPIMYIFSGVAMPFAVLVYWLTNNICNLL 272 >gi|886322|gb|AAB53138.1| ORF312; L222-ORF13; similar to C-terminal 60 kda inner membrane proteins of E. coli and Pseudomonas putida; putative [Mycobacterium leprae] Length = 312 Score = 94.3 bits (232), Expect = 5e-17, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 95/279 (34%), Gaps = 41/279 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 +++ + + + +++M ++ L + +Q +T + Sbjct: 11 LDIVYYPVSWIMWVWYKLFAAVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQI 70 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +QP+I L+ K+ Q + M +L + H NP+ GC P+L QIPVF +Y + Sbjct: 71 EELQPRIRALQRKY-GKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHALRS 129 Query: 450 ---SLEMRHAPFW-------------------------GWIKDLAAADPTNIFTLFGILP 481 + P W + A T L + Sbjct: 130 FNRTTGGFGQPHMSVTENRMTGNYVFTPVDVGHFLDANLWGAPIGAY-MTQRSGLDAFID 188 Query: 482 FYLPGFMHVGI-WPIIMSLSMFIQMKMS----------PPPADKGQAMILNWMPVVFVFA 530 F P + VGI ++ ++ + + S P + L P V Sbjct: 189 FSRPAVILVGIPMMVLAGVATYFNSRASIARQSAEAAENPQTALMNKIALYVFPFGVVVG 248 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P +I+YW +N+ + QQ + M E +R Sbjct: 249 GPFLPLAIILYWFSNNIWTFGQQHYVFSMIEKEDEAKNR 287 >gi|164656152|ref|XP_001729204.1| hypothetical protein MGL_3671 [Malassezia globosa CBS 7966] gi|159103094|gb|EDP41990.1| hypothetical protein MGL_3671 [Malassezia globosa CBS 7966] Length = 474 Score = 94.3 bits (232), Expect = 5e-17, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 93/267 (34%), Gaps = 51/267 (19%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + L+ I++ T ++L PL ++ + NIQP++ Sbjct: 138 WSPSGLLQHLLDGVQYYTNLPWWATIIVVTCGIRLAIAPLLVYVQANSIRLSNIQPQMQA 197 Query: 399 LREKFKQSPPQVLQKAMI-------QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + + + + Q+ M +L +N +P +Q+P+F + Y ++ Sbjct: 198 MIKDLEYAKSTGNQQEMQNAAINVRKLLSDNNCSPFKSLLLPAVQMPIFLSFYFALTG-- 255 Query: 452 EMRHAP-------FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI- 503 + AP W DL ADP PII S + Sbjct: 256 -LAKAPLPALTTGGIAWFPDLTLADPYY-------------------ALPIISSAMTLLV 295 Query: 504 --------QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ--- 552 M+ + +L + V+ + +SSFP+ +++YWS +N S+ Q Sbjct: 296 LETGAETGTTAMNQSSQARFMKNVLRGVTVLAAWLISSFPSAVLLYWSTTNTFSLFQLLA 355 Query: 553 --QAVIMKMHGAEIGLIDRLRSTFSKN 577 + ++ + ++ + Sbjct: 356 LRTRFLKRLWRLPEKVEHPVKPHIKEK 382 >gi|148998505|ref|ZP_01825946.1| OxaA-like protein precursor [Streptococcus pneumoniae SP11-BS70] gi|149021925|ref|ZP_01835912.1| OxaA-like protein precursor [Streptococcus pneumoniae SP23-BS72] gi|168487113|ref|ZP_02711621.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1087-00] gi|168576625|ref|ZP_02722491.1| membrane protein OxaA 2 [Streptococcus pneumoniae MLV-016] gi|225855465|ref|YP_002736977.1| OxaA-like protein precursor [Streptococcus pneumoniae JJA] gi|225857549|ref|YP_002739060.1| OxaA-like protein precursor [Streptococcus pneumoniae P1031] gi|307068584|ref|YP_003877550.1| preprotein translocase subunit YidC [Streptococcus pneumoniae AP200] gi|147755698|gb|EDK62744.1| OxaA-like protein precursor [Streptococcus pneumoniae SP11-BS70] gi|147929963|gb|EDK80951.1| OxaA-like protein precursor [Streptococcus pneumoniae SP23-BS72] gi|183569986|gb|EDT90514.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1087-00] gi|183577623|gb|EDT98151.1| membrane protein OxaA 2 [Streptococcus pneumoniae MLV-016] gi|225723420|gb|ACO19273.1| membrane protein OxaA 2 [Streptococcus pneumoniae JJA] gi|225724602|gb|ACO20454.1| membrane protein OxaA 2 [Streptococcus pneumoniae P1031] gi|301794918|emb|CBW37379.1| membrane protein OxaA 2 precursor [Streptococcus pneumoniae INV104] gi|306410121|gb|ADM85548.1| Preprotein translocase subunit YidC [Streptococcus pneumoniae AP200] gi|332072161|gb|EGI82647.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA41301] gi|332199290|gb|EGJ13368.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA41317] gi|332199987|gb|EGJ14061.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA47901] Length = 308 Score = 94.3 bits (232), Expect = 6e-17, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 76/209 (36%), Gaps = 24/209 (11%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 ILLQ+P F AIY + + A + G +P P + V Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ L + + + Q + +M P++ V PA + +YW + I+ Sbjct: 184 AGVLYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 QQ ++ + L ++R +KN Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPPK 270 >gi|325957280|ref|YP_004292692.1| hypothetical protein LAC30SC_08260 [Lactobacillus acidophilus 30SC] gi|325333845|gb|ADZ07753.1| hypothetical protein LAC30SC_08260 [Lactobacillus acidophilus 30SC] Length = 322 Score = 94.3 bits (232), Expect = 6e-17, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 97/268 (36%), Gaps = 47/268 (17%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYVS 385 G + ++ + + + + G I++ T V+L+ PL Q Sbjct: 33 APHSGIYGWVYQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNK 92 Query: 386 TANMKNIQPKIDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCWPIL 434 + + ++ ++ K Q+ +LY + ++ GC P++ Sbjct: 93 SVRQQEKMARLQPQMKLIQTAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGMGCLPLI 152 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ + IY+ + S ++ H+ F+G L+ + Sbjct: 153 IQLPIMWGIYQAVFYSPQLAHSTFFG--ISLSQK---------------------SVVLA 189 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISI 550 I+ ++ IQ +S + Q + M P++ +F SF L +YW+ N++ I Sbjct: 190 IVATVFTVIQGYISLIGIPEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMI 249 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 +QQ ++ + + + Sbjct: 250 IQQLIVT--FVLTPKVKQHVAEELKEKP 275 >gi|229488335|ref|ZP_04382201.1| putative membrane protein [Rhodococcus erythropolis SK121] gi|229323839|gb|EEN89594.1| putative membrane protein [Rhodococcus erythropolis SK121] Length = 317 Score = 93.9 bits (231), Expect = 6e-17, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 98/268 (36%), Gaps = 46/268 (17%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + +F L+S + + ++++ +K L F KQ + M+ +QP+I L+ Sbjct: 14 WFWHKVFSLVSGSPDNGVVWALSVVFLVFTLKALLFKPFVKQVRTQLVMQKLQPQIKALQ 73 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEMRHAP 457 +K+ Q L M +L K HN +PL GC P+L+Q PVF +Y V+ + H P Sbjct: 74 KKYSG-DRQKLTVEMAKLQKEHNYSPLLGCLPMLVQAPVFIGLYHVLRSFNRTGAASHVP 132 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFY--------------------------------LP 485 F + ++ AD N F + Sbjct: 133 FLSPTEPMSVADNANTANYFFSASDVQSFLDAKLFGAPLSAMISSPAAQLEAFGDVSRIS 192 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----QAMILN-----WMPVVFVFALSSFP 535 + I +++ + S Q I+N PV + + P Sbjct: 193 IILVAVPLMIFAAVATHFTSRASIARQVDTGTVNPQTAIMNKLALWVFPVGVIAFGAFAP 252 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 +++Y+ +N ++ QQ + AE Sbjct: 253 VAILLYFVSNNCWTLGQQHFVYGRIAAE 280 >gi|217964474|ref|YP_002350152.1| membrane protein OxaA 2 [Listeria monocytogenes HCC23] gi|217333744|gb|ACK39538.1| membrane protein OxaA 2 [Listeria monocytogenes HCC23] gi|307570961|emb|CAR84140.1| inner membrane protein oxaA2 precursor [Listeria monocytogenes L99] Length = 275 Score = 93.9 bits (231), Expect = 6e-17, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 101/253 (39%), Gaps = 39/253 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393 Y I +M + GN+GIAI++TT+ ++ L PL + + M++ Sbjct: 36 TYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95 Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449 L+ + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I Sbjct: 96 EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S E+ + W +L + D + II L Q +S Sbjct: 156 SSEIA-EHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192 Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-- 563 Q + + P++ +F + P+ L +YW+ + Q + K++ + Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHP 252 Query: 564 -IGLIDRLRSTFS 575 I ++++ F Sbjct: 253 EIKVMEQEEKEFE 265 >gi|119026646|ref|YP_910491.1| membrane protein oxaA [Bifidobacterium adolescentis ATCC 15703] gi|118766230|dbj|BAF40409.1| membrane protein oxaA [Bifidobacterium adolescentis ATCC 15703] Length = 345 Score = 93.9 bits (231), Expect = 6e-17, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 115/272 (42%), Gaps = 34/272 (12%) Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP-MFMLMSYFYNLVGNFGIAIMLTTVFV 371 + + + + ++W +A FM+M + ++ ++I+ + V Sbjct: 2 NQDQFLLDSGFWGWLYKLLYPVEWLMTQIMAGFHRFMVMLGMNEIGFSWVMSIVFLVIVV 61 Query: 372 KLLFFPLAKKQYVSTANMK--------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 + FPL K M+ +Q ++ + K + + LQ+ M++LY+ ++ Sbjct: 62 QACVFPLFYKSMKGMRKMQAQMAVLQPKMQRIQNKYKGKNDPASKEALQREMMKLYQDND 121 Query: 424 INPLAGC---WPILLQIPVFFAIYKVISISLEM-----RHAPFWGWIKDLAAADPTNIFT 475 NP+ GC P+ +Q PVF ++ +S + R+ G D+A A Sbjct: 122 ANPMGGCTSMLPMFVQGPVFMCMFYTLSAIPYIARGKFRNGSGLGAF-DIATAKQFTSTN 180 Query: 476 LFGIL------PFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMIL 520 +FG+ + G + +GI+ +M +++ K + + ++ Sbjct: 181 VFGVNVAENFTTADIHGKIIIGIFVALMCFCLWLMQYNSMKRNMAQSAANKQTEMMQKMM 240 Query: 521 NWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551 WM P++++F+ + P +++YW +N+ +++ Sbjct: 241 LWMFPIMYIFSGVAMPFAVLVYWLTNNICNLL 272 >gi|115433064|ref|XP_001216669.1| predicted protein [Aspergillus terreus NIH2624] gi|114189521|gb|EAU31221.1| predicted protein [Aspergillus terreus NIH2624] Length = 504 Score = 93.9 bits (231), Expect = 6e-17, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 89/243 (36%), Gaps = 38/243 (15%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + + + + ++ +F+ G A I+ + V+L ++ + Sbjct: 118 KALGLDYGWGPSSLIEYVIEHFHIWGGLPWWASIVGAGLLVRLALLKPMLGAADTSTKIN 177 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAI 443 N++ LR K + + Q M+Q L+ H + P LLQ+P+ F Sbjct: 178 NLRDVSTPLRTKMTTAAREGKQTEMMQARMELNNLHAQHGVKPWKSFV-PLLQVPLGFGC 236 Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 Y+V+ + GWIKDL ADP + P +L Sbjct: 237 YRVVKGMTALPVPGLALESVGWIKDLTVADPYF-------------------VLPATTAL 277 Query: 500 SMFIQMK------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M++ + ++ M L MP + +S FP+ L +Y+ + ++ Q Sbjct: 278 FMYLSFRKGGESGINNLTNSSLGKMFLYGMPAMTFAFMSFFPSALQLYFVATGAFALGQS 337 Query: 554 AVI 556 ++ Sbjct: 338 YLL 340 >gi|328466765|gb|EGF37883.1| OxaA-like protein precursor [Listeria monocytogenes 1816] Length = 275 Score = 93.9 bits (231), Expect = 6e-17, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 39/253 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393 Y I +M + GN+GIAI++TT+ ++ L PL + + M++ Sbjct: 36 TYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95 Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449 L+ + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I Sbjct: 96 EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S E+ + + W +L + D + II L Q +S Sbjct: 156 SSEIA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192 Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-- 563 Q + + P++ +F + P+ L +YW+ + Q + K++ + Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHP 252 Query: 564 -IGLIDRLRSTFS 575 I ++++ F Sbjct: 253 EIKVMEQEEKEFE 265 >gi|308234064|ref|ZP_07664801.1| membrane protein insertase, YidC/Oxa1 family [Atopobium vaginae DSM 15829] gi|328943461|ref|ZP_08240926.1| inner membrane protein OxaA [Atopobium vaginae DSM 15829] gi|327491430|gb|EGF23204.1| inner membrane protein OxaA [Atopobium vaginae DSM 15829] Length = 252 Score = 93.9 bits (231), Expect = 6e-17, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 119/248 (47%), Gaps = 19/248 (7%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + + ++ +L G++G+A+++ T+ +++L PL K S+A M+ +QPK+ Sbjct: 1 MWDWFIGILTQILELLQSLCGDWGLAVIILTLIIRVLLIPLMTKSTESSAQMQVLQPKMQ 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E+++K+ P + + M + Y H N L GC P LLQ+P+FF ++ V S + A Sbjct: 61 EIKDKYADDPA-RMNEEMQKFYSEHKFNMLGGCLPTLLQMPIFFGLFTVASKIPQ--DAS 117 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 F+ + ++ + P +F G+ G + I + FI M ++ + Q Sbjct: 118 FFNILPSISLS-PQTVFEQQGL-----SGAAIYILLVITFGVMTFIPMVITSSASSSQQR 171 Query: 518 M----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + M V ++ + P +++Y++ S+V I+QQ ++ ++ R++ Sbjct: 172 SQTITMGAVMSVFMLWFGWTVPTAVLLYYNTSSVWQIIQQKLVT------DRVMARVKKE 225 Query: 574 FSKNYNSQ 581 + +Q Sbjct: 226 TEEKMKNQ 233 >gi|168484274|ref|ZP_02709226.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1873-00] gi|169833583|ref|YP_001695329.1| OxaA-like protein precursor [Streptococcus pneumoniae Hungary19A-6] gi|194397013|ref|YP_002038558.1| OxaA-like protein precursor [Streptococcus pneumoniae G54] gi|168996085|gb|ACA36697.1| membrane protein OxaA 2 [Streptococcus pneumoniae Hungary19A-6] gi|172042503|gb|EDT50549.1| membrane protein OxaA 2 [Streptococcus pneumoniae CDC1873-00] gi|194356680|gb|ACF55128.1| SpoIIIJ family protein [Streptococcus pneumoniae G54] gi|332199401|gb|EGJ13478.1| 60Kd inner membrane family protein [Streptococcus pneumoniae GA47368] Length = 308 Score = 93.9 bits (231), Expect = 7e-17, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 76/209 (36%), Gaps = 24/209 (11%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +LLQ+P F AIY + + A + G +P P + V Sbjct: 143 LLLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ L + + + Q + +M P++ V PA + +YW + I+ Sbjct: 184 AGVLYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 QQ ++ + L ++R +KN Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPPK 270 >gi|15241690|ref|NP_201011.1| OXA1; P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] gi|38372434|sp|Q42191|OXA1_ARATH RecName: Full=Mitochondrial inner membrane protein OXA1; AltName: Full=Oxidase assembly 1 protein; Short=AtOXA1; Flags: Precursor gi|2462077|emb|CAA72619.1| Oxa1 protein [Arabidopsis thaliana] gi|6624207|dbj|BAA88473.1| AtOXA1 [Arabidopsis thaliana] gi|10176922|dbj|BAB10166.1| Oxa1 protein [Arabidopsis thaliana] gi|21618094|gb|AAM67144.1| AtOXA1 [Arabidopsis thaliana] gi|22655115|gb|AAM98148.1| AtOXA1 [Arabidopsis thaliana] gi|30387505|gb|AAP31918.1| At5g62050 [Arabidopsis thaliana] gi|332010172|gb|AED97555.1| mitochondrial inner membrane protein OXA1 [Arabidopsis thaliana] Length = 429 Score = 93.9 bits (231), Expect = 7e-17, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 94/291 (32%), Gaps = 34/291 (11%) Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + G A T+ A E+ + +F + Sbjct: 80 YRYMSSAPGVGSEKIGVMSDIAEVITDSTLQDVPAQAAAAVSEVTLAAADSFFPIAALQQ 139 Query: 349 LMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE----KF 403 + + + +I++ T+ ++ PL KQ T + ++P+++ +RE K Sbjct: 140 CIDMVHTFTGFEWWASIVVATILIRSSTVPLLIKQMKDTTKLALMRPRLESIREEMQNKG 199 Query: 404 KQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE---MRHAPFW 459 S + ++ L+K + + P + +Q P+F + I E Sbjct: 200 MDSVTMAEGQKKMKNLFKEYGVTPFTPMKGMFIQGPLFICFFLAIRNMAEKVPSFQTGGA 259 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP------PAD 513 W DL D I P+I L+ I ++ + P Sbjct: 260 LWFTDLTTPDSLY-------------------ILPVITGLTFLITVECNAQEGMEGNPMA 300 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + ++ V SFP + YW SN+ S++ VI + ++ Sbjct: 301 GTVKTVCRVFALLTVPMTMSFPQAIFCYWITSNLFSLMYGLVIKRPQVKKM 351 >gi|289167183|ref|YP_003445450.1| oxaA2 [Streptococcus mitis B6] gi|288906748|emb|CBJ21582.1| oxaA2 [Streptococcus mitis B6] Length = 308 Score = 93.9 bits (231), Expect = 7e-17, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 76/209 (36%), Gaps = 24/209 (11%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGIGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +LLQ+P F AIY + + A + G +P P + V Sbjct: 143 VLLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAF 183 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551 I+ L + + + Q + +M P++ V PA + +YW + I+ Sbjct: 184 AGILYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 QQ ++ + L ++R +KN Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPPK 270 >gi|327184010|gb|AEA32457.1| hypothetical protein LAB52_07690 [Lactobacillus amylovorus GRL 1118] Length = 322 Score = 93.9 bits (231), Expect = 7e-17, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 100/258 (38%), Gaps = 43/258 (16%) Query: 339 FYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + ++ +P+ +M +++ G I++ T V+L+ PL Q + + + Sbjct: 43 YQWLGRPLQNIMIQTAHMIGGENGAGWGIVIITFVVRLILMPLMLVQQNKSVRQQEKMAR 102 Query: 396 IDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCWPILLQIPVFFAIY 444 + ++ K Q+ +LY + ++ GC P+++Q+P+ + IY Sbjct: 103 LQPQMKLIQTAMKHKGITPDQQMTLSGWQRELYSKNQVSLTGGMGCLPLIIQLPIMWGIY 162 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + S ++ H+ F+G L+ + I+ ++ IQ Sbjct: 163 QAVFYSPQLAHSTFFG--ISLSQK---------------------SVVLAIVATVFTVIQ 199 Query: 505 MKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S + Q + M P++ +F SF L +YW+ N++ I+QQ ++ Sbjct: 200 GYISLIGIPEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIIQQLIVT--F 257 Query: 561 GAEIGLIDRLRSTFSKNY 578 + + + Sbjct: 258 VLTPKVKQHVAEELKEKP 275 >gi|330684781|gb|EGG96474.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU121] Length = 289 Score = 93.9 bits (231), Expect = 7e-17, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 100/252 (39%), Gaps = 35/252 (13%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394 ++ PM L+ + N L ++G+AI++ ++L+ P Y ++ M+ Sbjct: 32 FYNTFVDPMKHLLQWLGNDVLHNDYGLAIIILVFVIRLVLLPFMLSNYKNSHMMREKMKV 91 Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + ++++YK +++NP+ GC P+L+Q+P+ +Y Sbjct: 92 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIMGLY 151 Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ L + P + W +L D I ++ + + Sbjct: 152 FVLKDKLVSGLSVHPHFLWF-NLTKPD-----------------IWITIIAGVLYFIQAY 193 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG- 561 + K P + M++ P++ ++ S + L +YWS S +VQ + Sbjct: 194 VSSKTMPQEQRQMGYMMMIVSPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANMYYSK 253 Query: 562 -AEIGLIDRLRS 572 A+ + L Sbjct: 254 LAKKEVEPLLEK 265 >gi|16803419|ref|NP_464904.1| OxaA-like protein precursor [Listeria monocytogenes EGD-e] gi|46907607|ref|YP_013996.1| OxaA-like protein precursor [Listeria monocytogenes serotype 4b str. F2365] gi|47094519|ref|ZP_00232187.1| SpoJ family protein [Listeria monocytogenes str. 4b H7858] gi|47095963|ref|ZP_00233566.1| SpoJ family protein [Listeria monocytogenes str. 1/2a F6854] gi|224499955|ref|ZP_03668304.1| OxaA-like protein precursor [Listeria monocytogenes Finland 1988] gi|224501677|ref|ZP_03669984.1| OxaA-like protein precursor [Listeria monocytogenes FSL R2-561] gi|226223980|ref|YP_002758087.1| SpoIIIJ protein [Listeria monocytogenes Clip81459] gi|254824561|ref|ZP_05229562.1| OxaA-like protein [Listeria monocytogenes FSL J1-194] gi|254827640|ref|ZP_05232327.1| OxaA-like protein [Listeria monocytogenes FSL N3-165] gi|254829862|ref|ZP_05234517.1| OxaA-like protein precursor [Listeria monocytogenes 10403S] gi|254852573|ref|ZP_05241921.1| OxaA-like protein [Listeria monocytogenes FSL R2-503] gi|254898455|ref|ZP_05258379.1| OxaA-like protein precursor [Listeria monocytogenes J0161] gi|254912054|ref|ZP_05262066.1| SpoJ family protein [Listeria monocytogenes J2818] gi|254932564|ref|ZP_05265923.1| OxaA-like protein [Listeria monocytogenes HPB2262] gi|254936381|ref|ZP_05268078.1| OxaA-like protein [Listeria monocytogenes F6900] gi|255521766|ref|ZP_05389003.1| OxaA-like protein precursor [Listeria monocytogenes FSL J1-175] gi|284801765|ref|YP_003413630.1| OxaA-like protein precursor [Listeria monocytogenes 08-5578] gi|284994907|ref|YP_003416675.1| OxaA-like protein precursor [Listeria monocytogenes 08-5923] gi|300766399|ref|ZP_07076356.1| SpoJ family protein [Listeria monocytogenes FSL N1-017] gi|38503111|sp|Q8Y7A9|OXAA2_LISMO RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|67461028|sp|Q71ZU1|OXAA2_LISMF RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|16410795|emb|CAC99457.1| lmo1379 [Listeria monocytogenes EGD-e] gi|46880875|gb|AAT04173.1| SpoJ family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47015709|gb|EAL06639.1| SpoJ family protein [Listeria monocytogenes str. 1/2a F6854] gi|47017102|gb|EAL07967.1| SpoJ family protein [Listeria monocytogenes str. 4b H7858] gi|225876442|emb|CAS05151.1| Putative SpoIIIJ protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258600019|gb|EEW13344.1| OxaA-like protein [Listeria monocytogenes FSL N3-165] gi|258605886|gb|EEW18494.1| OxaA-like protein [Listeria monocytogenes FSL R2-503] gi|258608972|gb|EEW21580.1| OxaA-like protein [Listeria monocytogenes F6900] gi|284057327|gb|ADB68268.1| OxaA-like protein precursor [Listeria monocytogenes 08-5578] gi|284060374|gb|ADB71313.1| OxaA-like protein precursor [Listeria monocytogenes 08-5923] gi|293584123|gb|EFF96155.1| OxaA-like protein [Listeria monocytogenes HPB2262] gi|293590021|gb|EFF98355.1| SpoJ family protein [Listeria monocytogenes J2818] gi|293593800|gb|EFG01561.1| OxaA-like protein [Listeria monocytogenes FSL J1-194] gi|300512903|gb|EFK39993.1| SpoJ family protein [Listeria monocytogenes FSL N1-017] gi|332311821|gb|EGJ24916.1| Membrane protein oxaA 2 [Listeria monocytogenes str. Scott A] Length = 275 Score = 93.5 bits (230), Expect = 8e-17, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 39/253 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393 Y I +M + GN+GIAI++TT+ ++ L PL + + M++ Sbjct: 36 TYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95 Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449 L+ + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I Sbjct: 96 EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S E+ + + W +L + D + II L Q +S Sbjct: 156 SSEIA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192 Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-- 563 Q + + P++ +F + P+ L +YW+ + Q + K++ + Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHP 252 Query: 564 -IGLIDRLRSTFS 575 I ++++ F Sbjct: 253 EIKVMEQEEKEFE 265 >gi|16800484|ref|NP_470752.1| OxaA-like protein precursor [Listeria innocua Clip11262] gi|38503124|sp|Q92BX6|OXAA2_LISIN RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|16413889|emb|CAC96647.1| lin1416 [Listeria innocua Clip11262] Length = 275 Score = 93.5 bits (230), Expect = 8e-17, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 39/253 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393 Y I +M + GN+GIAI++TT+ ++ L PL + + M++ Sbjct: 36 TYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95 Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449 L+ + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I Sbjct: 96 EIDEIQARLKRATSKEEQANIQKEMMAVYSKYNINPIQMGCLPLLIQMPILMAFYYAIRG 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S E+ + + W +L + D + II L Q +S Sbjct: 156 SSEIA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192 Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-- 563 Q + + P++ +F + P+ L +YW+ + Q + K++ + Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHP 252 Query: 564 -IGLIDRLRSTFS 575 I ++++ F Sbjct: 253 EIKVMEQEEKEFE 265 >gi|153956073|ref|YP_001396838.1| hypothetical protein CKL_3476 [Clostridium kluyveri DSM 555] gi|219856408|ref|YP_002473530.1| hypothetical protein CKR_3065 [Clostridium kluyveri NBRC 12016] gi|146348931|gb|EDK35467.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] gi|219570132|dbj|BAH08116.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 297 Score = 93.5 bits (230), Expect = 8e-17, Method: Composition-based stats. Identities = 71/295 (24%), Positives = 119/295 (40%), Gaps = 59/295 (20%) Query: 338 WFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 FIA P+ L+ + Y + N+G+AI+ TV +K L PL KQY + + + NIQ K Sbjct: 1 MIDFIAFPIGHLLKFIYEHIAFNNYGVAIIELTVIIKTLLLPLYIKQYHAASGISNIQYK 60 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV--------- 446 + E+++K K + + L + +++LYK +N+NP +GC P+L Q+P+ F++Y V Sbjct: 61 VQEIQKKHKNNKEK-LNQEIMKLYKENNVNPASGCLPLLFQMPILFSLYYVVSQPLKYMT 119 Query: 447 ------ISISLEM--RHAPFWGWIKDLA-------------------AADPTNIFTLFGI 479 I EM + + + DL+ D G+ Sbjct: 120 GKSPAAIQQLFEMIPQGSDRITNMHDLSIINYFSKHLDKLSDVKGMLEKDDLLNMNFLGM 179 Query: 480 LPFYLPGFMHVGIWP---------IIMSLSMFIQMKMSPPPA----------DKGQAMIL 520 +P I ++ + + +I K S D Q + Sbjct: 180 NLGSVPNLHFNHIDTNNLLILLIPLLAAATTYISTKYSTNQTVSQTSDKQIADSMQGNMN 239 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 VV F + PAG+ IYW N+ I QQ + K + L + + Sbjct: 240 LIASVVTGFMAFTLPAGMGIYWITGNIYQIFQQMFMNK-FVIKKSLNNNKKGKKR 293 >gi|312865633|ref|ZP_07725857.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei F0415] gi|311098754|gb|EFQ56974.1| membrane protein insertase, YidC/Oxa1 family [Streptococcus downei F0415] Length = 266 Score = 93.5 bits (230), Expect = 9e-17, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 98/228 (42%), Gaps = 27/228 (11%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL 411 + + G+ GI I+L T+ V+L PL +Q S+ M+ +QP++ +++++ + Sbjct: 45 QWLSFGGSVGIGIILITLIVRLALVPLYNRQMKSSREMQELQPELKRIQKEYADDRN-LQ 103 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 +LYK + +N A PIL+Q+PV A+Y+ + + F W +L D T Sbjct: 104 YAKTQELYKENGVNQWAAFLPILIQLPVMMALYQALIRVPALSQGNFLIW--NLGKNDGT 161 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN---WMPVVFV 528 I PI+ + F+ M +S + A + MP+ Sbjct: 162 F-------------------ILPILAAFFTFLSMWLSNKATKEKNAFMTATSIIMPLFIF 202 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + + F +G+ +YW+ N + Q V++ + +I + K Sbjct: 203 WIGTRFTSGIALYWAIGNAFQVAQ--VLIFHNPFKIIAERERKEALEK 248 >gi|282850778|ref|ZP_06260153.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus gasseri 224-1] gi|282558186|gb|EFB63773.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus gasseri 224-1] Length = 166 Score = 93.5 bits (230), Expect = 9e-17, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 18/156 (11%) Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 LYK INP GC P+L+Q+PV +A+Y+ I + ++ + W+ DL DP I Sbjct: 1 LYKEAGINPYTGCLPMLIQLPVMYALYQAIWRTPQL-QNGRFLWM-DLGRPDPYYIM--- 55 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPA 536 P F + S +I +P + G + + MP++ + + Sbjct: 56 ---PVLAAAFTFI---------STYISQMSTPQSSQNGMTKGMTYLMPLIIGVSAIGIQS 103 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 + +YW SN+ +VQ ++ + L ++ ++ Sbjct: 104 AISLYWVISNLFQVVQTFILQNPFKYQRELEEQKKA 139 >gi|229822836|ref|ZP_04448906.1| hypothetical protein GCWU000282_00125 [Catonella morbi ATCC 51271] gi|229787649|gb|EEP23763.1| hypothetical protein GCWU000282_00125 [Catonella morbi ATCC 51271] Length = 323 Score = 93.5 bits (230), Expect = 9e-17, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 94/254 (37%), Gaps = 39/254 (15%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ------ 393 Y L L ++G+AI++ T+ ++ P + K T + Sbjct: 44 YLGKPAAAFLDFLAGFLFNSYGLAIIIVTLLTRVFMLPSSLKMTRDTMISQARMKVAQPE 103 Query: 394 --PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL---AGCWPILLQIPVFFAIYKVIS 448 +E+ + LQ+ ++ +YK +NIN L +GC P+LLQ+PV A+Y I Sbjct: 104 INEIQEEINASKDPAERARLQQELMGVYKKYNINMLGGLSGCLPLLLQMPVISAVYAAIR 163 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM-FIQMKM 507 S + I + + I + +S+ ++ K Sbjct: 164 TS--------------------SAIQNSTFLGIQLGQRSTLIVILVVAVSILQSWLMQKQ 203 Query: 508 SPPPADKGQA----MILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P +A ++ WM P++F + + AGL +Y+ V I QQ H Sbjct: 204 MPSTPGNEKAGQTSQVMFWMNPILFGWMTWTTDAGLGLYFLAGAVFMIGQQLYTN--HVV 261 Query: 563 EIGLIDRLRSTFSK 576 + + + + + Sbjct: 262 KPKIQEIIDQDMAN 275 >gi|118472161|ref|YP_891135.1| inner membrane protein translocase component YidC [Mycobacterium smegmatis str. MC2 155] gi|118173448|gb|ABK74344.1| membrane protein OxaA [Mycobacterium smegmatis str. MC2 155] Length = 367 Score = 93.5 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 94/270 (34%), Gaps = 39/270 (14%) Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 +++ + +++M ++ + + KQ Sbjct: 2 FNFFSLDIIYYPVSAIMWVWYKAFSFLLGPTNFFAWALSVMFLVFTLRAILYKPFVKQIR 61 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +T M+ +QP+I L++K+ Q + M +L K H NP+ GC P+L Q+PVF +Y Sbjct: 62 TTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQKEHGFNPILGCLPMLAQVPVFLGLY 120 Query: 445 KVISI-------------SLE--------MRHAPFWGWIKD---LAAADPTNIFTLFGIL 480 V+ S+E + A D A + G+ Sbjct: 121 HVLMSFNRTQTGIGRLGLSVEENRSLGNYVFSATDVQHFLDANLFGAPLGATMIQQHGLE 180 Query: 481 PFYLPGFMHVGI----WPIIMSLSMFIQMKMS------PPPADKGQAMI----LNWMPVV 526 F + V I I+ ++ + S A+ AM+ L P+ Sbjct: 181 AFTEFNRLAVIIVGVPIMILAGIATHFNSRASVARQSVEAAANPQTAMMNKLALYVFPLG 240 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V P +I+YW +N+ + QQ + Sbjct: 241 VVVGGPFLPLAVIMYWLANNIWTYGQQHYV 270 >gi|229816993|ref|ZP_04447275.1| hypothetical protein BIFANG_02248 [Bifidobacterium angulatum DSM 20098] gi|229785738|gb|EEP21852.1| hypothetical protein BIFANG_02248 [Bifidobacterium angulatum DSM 20098] Length = 347 Score = 93.5 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 109/274 (39%), Gaps = 33/274 (12%) Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML-MSYFYNLVGNFGIAIMLTTV 369 + + + + ++W +A L M + ++ ++I+ + Sbjct: 1 MGNQDQFLLDSGFWGWLYKLLYPVEWLMTQIMAVFHKFLVMLGMNEIGFSWVLSIVFLVI 60 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQP--------KIDELREKFKQSPPQVLQKAMIQLYKT 421 V++ FPL K M+ ++ + K + + +Q+ ++LY+ Sbjct: 61 VVQICVFPLFYKSIKGMRKMQADMQVLQPKLKRIQNKYKGKNDPASKEAMQRETMKLYQD 120 Query: 422 HNINPLAGC---WPILLQIPVFFAIYKVISISLEM-RHA---PFWGWIKDLAAADPTNIF 474 NP+ GC P+ +Q PVF ++ +S + R D+A A Sbjct: 121 TGTNPMGGCTSMLPMFVQGPVFMCMFYTLSAIPYIARGKFRDGQGLGAFDIATAKEFTST 180 Query: 475 TLFGILPFY------LPGFMHVGIWPIIMSLSMFIQM----KMSPPPADK-------GQA 517 T+FG+ + G + +GI+ +M +++ K + P + Q Sbjct: 181 TVFGVNVADNFTTATVSGKIVIGIFVALMCFCLWLMQFNSMKRNMPQNNAQNKQAEMMQK 240 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 M+L P++++F+ + P +++YW +NV +++ Sbjct: 241 MMLWVFPIMYIFSGIAMPFAVLVYWLTNNVCNLL 274 >gi|212535248|ref|XP_002147780.1| mitochondrial export translocase Oxa1, putative [Penicillium marneffei ATCC 18224] gi|210070179|gb|EEA24269.1| mitochondrial export translocase Oxa1, putative [Penicillium marneffei ATCC 18224] Length = 518 Score = 93.1 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 108/316 (34%), Gaps = 38/316 (12%) Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIH 319 + P TS + + + S + + S + + + + Sbjct: 51 SIASRPILSTSQNCRLRLKSSSYLPPVSVSSLSFARFNSTSTESAQATGDVTPLGESQLP 110 Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPL 378 + + + + + + M L+ + + + +I + + +L F Sbjct: 111 SIDDIPEKIGYLKDLGLDYGWGPSAFMEWLIEHIHIWGGMPWYASIAVAAIVTRLALFHP 170 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCW 431 A K + A I+ ++ ELR+K Q Q + + LY H+I Sbjct: 171 ALKAADNAAKTSPIKDEMMELRKKRMQLLSQGRQLDAAKAKVELDDLYAKHDIKMWRNFV 230 Query: 432 PILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 LLQIP+ F I++V+ + + WI DL + DP Sbjct: 231 -PLLQIPLGFGIFRVVRGMTTLPIPGLVVEEFAWIHDLTSYDPYY--------------- 274 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAM------ILNWMPVVFVFALSSFPAGLIIY 541 + PI+ S M++ M+ I +P + + ++ PA L +Y Sbjct: 275 ----VLPILTSGFMYLAMRKGMDSGVNEMGKTALGRSITIGLPAMSLLFIAWQPAALQLY 330 Query: 542 WSWSNVISIVQQAVIM 557 ++ S++ S+ Q + Sbjct: 331 FAVSSLFSLGQGYLFN 346 >gi|239637384|ref|ZP_04678366.1| putative membrane protein [Staphylococcus warneri L37603] gi|239596984|gb|EEQ79499.1| putative membrane protein [Staphylococcus warneri L37603] Length = 289 Score = 93.1 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 100/252 (39%), Gaps = 35/252 (13%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394 ++ PM L+ + N L ++G+AI++ ++L+ P Y ++ M+ Sbjct: 32 FYNTFVDPMKHLLQWLGNDVLHNDYGLAIIILVFVIRLVLLPFMLSNYKNSHMMREKMKV 91 Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + ++++YK +++NP+ GC P+L+Q+P+ +Y Sbjct: 92 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIMGLY 151 Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ L + P + W +L D I ++ + + Sbjct: 152 FVLKDKLVNGLSVHPHFLWF-NLTKPD-----------------IWITIIAGVLYFIQAY 193 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG- 561 + K P + M++ P++ ++ S + L +YWS S +VQ + Sbjct: 194 VSSKTMPQEQRQMGYMMMIVSPIMIIWIALSSASALGLYWSVSAAFLVVQTHFANMYYSK 253 Query: 562 -AEIGLIDRLRS 572 A+ + L Sbjct: 254 LAKKEVEPLLEK 265 >gi|77409832|ref|ZP_00786473.1| SpoIIIJ family protein [Streptococcus agalactiae COH1] gi|77171560|gb|EAO74788.1| SpoIIIJ family protein [Streptococcus agalactiae COH1] Length = 195 Score = 93.1 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 82/181 (45%), Gaps = 27/181 (14%) Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ---VLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 S+ M+ IQP++ EL++K+ P L M +YK +NP A P+L+Q+PV Sbjct: 1 MKSSQKMQEIQPRLKELQKKYPGKDPDSRLKLNDEMQSMYKAEGVNPYASVLPLLIQLPV 60 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +A+++ ++ ++ F +L+ DP I P++ +L Sbjct: 61 LWALFQALTRVXFLKVGTFLS--LELSQPDPYY-------------------ILPVLAAL 99 Query: 500 SMFIQMKMSPPPADKGQ---AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 F+ ++ A + ++ MP + + +F +G+++YW+ SN + Q ++ Sbjct: 100 FTFLSTWLTNKAAVEKNIALTLMTYVMPFIILVTSFNFASGVVLYWTVSNAFQVFQILLL 159 Query: 557 M 557 Sbjct: 160 N 160 >gi|78369430|ref|NP_001030412.1| mitochondrial inner membrane protein OXA1L precursor [Bos taurus] gi|122064647|sp|Q3SYV3|OXA1L_BOVIN RecName: Full=Mitochondrial inner membrane protein OXA1L; AltName: Full=Oxidase assembly 1-like protein; Short=OXA1-like protein; Flags: Precursor gi|74268195|gb|AAI03368.1| Oxidase (cytochrome c) assembly 1-like [Bos taurus] gi|296483636|gb|DAA25751.1| mitochondrial inner membrane protein OXA1L precursor [Bos taurus] Length = 441 Score = 93.1 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 83/231 (35%), Gaps = 36/231 (15%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ + + NL + AI TV + L FPL K A + N P+I Sbjct: 118 SYTPVGLIQNLLEFMHVNLGLPWWGAIAACTVLARCLVFPLIVKGQREAAKIHNHLPEIQ 177 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ + K H+I L Q P+F + + + Sbjct: 178 KFSARIREAKLTGNHTEFYRASSEMTFYQKKHDIKLFRPLILPLTQAPIFISFFIALREM 237 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF---- 502 + W +DL +DP + + P++++ +M+ Sbjct: 238 ANLPVPSLQTGGLWWFQDLTLSDP-------------------IYVLPLVVTATMWGVLE 278 Query: 503 IQMKMSPPPAD-KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + +D + + MP+ + FP + +YW SN+ S+ Q Sbjct: 279 LGAETGMQSSDLQWMRNFIRLMPLAVLPITIHFPTAVFMYWLSSNMFSLGQ 329 >gi|328474988|gb|EGF45780.1| OxaA-like protein precursor [Listeria monocytogenes 220] Length = 273 Score = 93.1 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 39/253 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393 Y I +M + GN+GIAI++TT+ ++ L PL + + M++ Sbjct: 36 TYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95 Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449 L+ + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I Sbjct: 96 EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S E+ + + W +L + D + II L Q +S Sbjct: 156 SSEIA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192 Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE-- 563 Q + + P++ +F + P+ L +YW+ + Q + K++ + Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHP 252 Query: 564 -IGLIDRLRSTFS 575 I ++++ F Sbjct: 253 EIKVMEQEEKEFE 265 >gi|327440675|dbj|BAK17040.1| preprotein translocase subunit YidC [Solibacillus silvestris StLB046] Length = 253 Score = 93.1 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 92/260 (35%), Gaps = 30/260 (11%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + E F + L + Y L I I+ + +L Sbjct: 16 LLAGCESVENKEGFFYSTFVRPMDWTLNTFGELFNGSYGLAIIAIILIIRLVLMPFMLKT 75 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVL--QKAMIQLYKTHNINPL-AGCWPI 433 ++ + Q + + R K ++P + + Q+ M+ LYK HNINPL GC P Sbjct: 76 YRSQATMKVKMDFVRPQMEDIQTRLKAAKTPEERMTVQQEMMSLYKEHNINPLNMGCLPA 135 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+ +Y I S E++ + W DL + D Sbjct: 136 LIQMPIIMGLYYAILYSAEIKTHS-FLWF-DLGSTDIW---------------------M 172 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVIS 549 I + F+Q K+S + Q + M P++ V S A L +YW+ + Sbjct: 173 TAIAGVVYFVQAKVSLQTVPEAQKNQMKLMIYVSPIMIVIISLSSMAALPLYWAVGGLFL 232 Query: 550 IVQQAVIMKMHGAEIGLIDR 569 IVQ + K + Sbjct: 233 IVQTYIGRKFFSSIPETKGN 252 >gi|304439080|ref|ZP_07398999.1| membrane protein OxaA [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372439|gb|EFM26026.1| membrane protein OxaA [Peptoniphilus duerdenii ATCC BAA-1640] Length = 238 Score = 93.1 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 24/201 (11%) Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 ++L P+ Q + M +QP++++++ K+K PQ L QLYK N N L+GC Sbjct: 44 RVLMLPIGISQMRNQKKMAELQPELEKIQTKYKN-DPQTLAAKQRQLYKDANYNMLSGCL 102 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 P+++Q+ V Y+V P K+ D +I F + + Sbjct: 103 PMIVQMMVLIGFYRVFY-------EPATYVFKEPGLYD--SIAKNFFYIK-DIDLKDTTL 152 Query: 492 IWPIIMSLSMFIQMKMSP----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 I PI+ +++ F+ ++ + + MPV+ +F + L++Y Sbjct: 153 ILPIVAAVTTFLSSWITQNSTANKASQTAQSQSMMNTMTLVMPVMIFMMGRNFASALVLY 212 Query: 542 WSWSNVISIVQQAV---IMKM 559 W+ SN+ ++QQ + I+K Sbjct: 213 WTVSNLFQVLQQLIQNVIIKR 233 >gi|295425290|ref|ZP_06817993.1| membrane protein chaperone OxaA [Lactobacillus amylolyticus DSM 11664] gi|295065066|gb|EFG55971.1| membrane protein chaperone OxaA [Lactobacillus amylolyticus DSM 11664] Length = 321 Score = 93.1 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 98/272 (36%), Gaps = 34/272 (12%) Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFP 377 IP + W + + +++ + G AI++ T+ V+ + P Sbjct: 27 GGNPQKGIPPHGGIYGWVYTWIGIPLQNVMLKTANAIKGANGAGWAIVIITLVVRTILLP 86 Query: 378 LAKKQYVSTANMKNIQPKIDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL- 427 L Q + + ++ ++ K Q+ +LY+ +N++ Sbjct: 87 LMLVQQKKSVTQQEKMARLQPQMKLIQEGMKHKPMTPEQQMQLSKWQRELYQKNNVSLTG 146 Query: 428 -AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 GC P+L+Q+P+ IY ++ S +R A F+G + Sbjct: 147 GIGCLPLLIQMPIMMGIYSAVAYSSVLREASFFG-------------------ISLNSKS 187 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSN 546 + I + + +I + P K ++ P++ +F SF L +YW+ N Sbjct: 188 LVLAIIATVFAVIQGYISLIGIPKEQKKTMQSMMFMNPIMTLFFSLSFSGALALYWAAGN 247 Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 ++I+QQ ++ R+ + + Sbjct: 248 FVTIIQQILVT--FVITPREKKRVAAEIKDHP 277 >gi|310800716|gb|EFQ35609.1| YidC/Oxa1 family membrane protein insertase [Glomerella graminicola M1.001] Length = 476 Score = 93.1 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 91/247 (36%), Gaps = 38/247 (15%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTA 387 F + + + + M + + G I T + ++L+ F ++A Sbjct: 141 GFLKTLGLDFGWGPSSVMQWAFEHIHVYSGLPWWGSIAATGILLRLVMFKPLLMAQETSA 200 Query: 388 NMKNIQP---------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 M+ +Q + E + + +++ + + K +NPL G LLQIP Sbjct: 201 RMQKLQQNPKYEEVRKGVQEAMSRGDTAAMTEMRRDLSVMNKNAGVNPLKG-LWGLLQIP 259 Query: 439 VFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 + +++V++ + + + W+ DL +DP + P Sbjct: 260 FGYGMFRVLNGAAAIPVPGMETGGFLWVSDLTVSDPLF-------------------LLP 300 Query: 495 IIMSLSMFIQMKMSP---PPADKGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 I L+MF +K+ P K Q ++ + + V + PAG+ Y+ + + + Sbjct: 301 IAGPLAMFAMVKLGSRYATPQAKAQQKLMMYILGPISVIFTAYLPAGVQWYFFVAGAVGV 360 Query: 551 VQQAVIM 557 Q + Sbjct: 361 FQNWLFN 367 >gi|238917977|ref|YP_002931494.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC 27750] gi|238873337|gb|ACR73047.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC 27750] Length = 423 Score = 93.1 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 102/293 (34%), Gaps = 79/293 (26%) Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP-----PQVLQKAMIQLYKT 421 T+ VK+L PL KQ T + P+I ++EK+K Q +Q +Y+ Sbjct: 48 FTLLVKMLMLPLQIKQQKMTKLQSVMNPEIKAIQEKYKGKNSDTVAMQKMQAETKAVYEK 107 Query: 422 HNINPLAGCWPILLQI-------------PVFFAIYKVISISL----------------- 451 + ++ C +L+Q+ P++ + KV+ +++ Sbjct: 108 YGVSQWGSCVQLLIQMPILFALYRVFQQIPLYISQIKVLFLNILGVNGVDGISSVSGYAD 167 Query: 452 ---EMRHAPF--------------------------WGWIKDLAAA--DPTNIFTLFGIL 480 E+ + D+ D N F + Sbjct: 168 TLNEIYGKTVDWSNTSTAVTTLNSFTADQWTKLKEAFPAFSDMITQNLDKINHMNTFLGV 227 Query: 481 PFY--LPGFMHVGIW-PIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFV 528 +H+ I PI+ ++ FI +K+S PA M+ +MP++ Sbjct: 228 NMSQNPGFGLHIAILIPILAGVTQFISVKVSQAGMEQPDSDNPAAASMKMMTYFMPIMSA 287 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 F S P+GL +YW + VI +Q I + + +IG + K + Sbjct: 288 FLAISLPSGLGVYWIATAVIQTIQTIFINRYYD-KIGTDKIVEKNVEKRNKKR 339 >gi|297797165|ref|XP_002866467.1| hypothetical protein ARALYDRAFT_496379 [Arabidopsis lyrata subsp. lyrata] gi|297312302|gb|EFH42726.1| hypothetical protein ARALYDRAFT_496379 [Arabidopsis lyrata subsp. lyrata] Length = 429 Score = 92.7 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 98/303 (32%), Gaps = 34/303 (11%) Query: 277 YLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDW 336 YL A + G A T+ A E+ + Sbjct: 68 YLPMAPMSAFAFYRYMSTAPGVGSEKIGVMSDIAEVITDSTLQDVPAQAAAAVSEVTLAA 127 Query: 337 GWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +F + + ++ + +I++ T+ ++ PL KQ T + ++P+ Sbjct: 128 ADSFFPIAALQHCIDMVHSFTGFGWWASIVVATILIRSSTVPLLIKQMKDTTKLALMRPR 187 Query: 396 IDELRE----KFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++ +RE K S + ++ L+K + + P + +Q P+F + I Sbjct: 188 LESIREEMQNKGMDSVTMAEGQKKMKNLFKEYGVTPFTPMKGMFIQGPLFICFFLAIRNM 247 Query: 451 LE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 E W DL D I P+I L+ I ++ Sbjct: 248 AEKVPSFQTGGALWFTDLTTPDSLY-------------------ILPVITGLTFLITVEC 288 Query: 508 SPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + P + ++ V SFP + YW SN+ S++ VI + Sbjct: 289 NAQEGMEGNPMAGTVKNVCRGFALLTVPMTMSFPQAIFCYWITSNLFSLMYGLVIKRPQV 348 Query: 562 AEI 564 ++ Sbjct: 349 KKM 351 >gi|312142024|ref|YP_004009360.1| integral membrane protein [Rhodococcus equi 103S] gi|325677525|ref|ZP_08157189.1| membrane protein OxaA [Rhodococcus equi ATCC 33707] gi|311891363|emb|CBH50684.1| putative integral membrane protein [Rhodococcus equi 103S] gi|325551772|gb|EGD21470.1| membrane protein OxaA [Rhodococcus equi ATCC 33707] Length = 363 Score = 92.7 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 107/298 (35%), Gaps = 59/298 (19%) Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ ++ + + +A+M ++ + + KQ +T Sbjct: 1 MLDFIYYPVSWILWVWHKVFGAVLGPDNGFAWALAVMFLVFTLRAILYKPFVKQVRTTRQ 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447 M+ +QP+I L++K+ + Q + M +L K H NP+ GC P+LLQ PVF ++ V+ Sbjct: 61 MQELQPQIKALQKKYSK-DRQRMALEMQKLQKEHGFNPVMGCLPVLLQAPVFIGLFHVLR 119 Query: 448 ----------------------------------SISLEMRHAPFWGWIKDLAAADPTNI 473 +S + AP I A Sbjct: 120 SFNRTGTGMGQLGMTPEQNAAIGNYAFSPDDVQSFLSARLFGAPISAAITTPQAQ--LEA 177 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK------MSPPPADKGQAMI----LNWM 523 F L+G +P L +I S++ + + A+ A++ L Sbjct: 178 FGLYGTVPTVLNIAAVAIPLMVIASVATHFNSRASVARQSAAAAANPQSAIMNKLALWVF 237 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR--LRSTFSKNYN 579 P+ + +++YW +N+ + QQ ++ + AE + + Sbjct: 238 PLGVLVGGPFLMIAILLYWVSNNIWTYAQQHIVFRRIDAEEAAKKQAVIERRADNAPK 295 >gi|256372785|ref|YP_003110609.1| 60 kDa inner membrane insertion protein [Acidimicrobium ferrooxidans DSM 10331] gi|256009369|gb|ACU54936.1| 60 kDa inner membrane insertion protein [Acidimicrobium ferrooxidans DSM 10331] Length = 336 Score = 92.7 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 33/254 (12%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 F + + + +++++Y ++ ++GIAI L TV V + PL + S M+ IQPK+ Sbjct: 9 EIFRPLFELLAGIVTFWYAIIPSYGIAIALLTVTVMVALSPLTIRSTRSMLQMQAIQPKL 68 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEM 453 EL+ + L +A +L+K ++PL GC P+LLQ P+ F +Y VI ++ Sbjct: 69 KELQ-RQYGKDRAGLAEAQQRLFKEEGVSPLGGCLPMLLQFPLLFVMYDVIRGLTHTVTS 127 Query: 454 RHAPFWGWI-------------KDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMS 498 HA + D D I L ++ + + +I Sbjct: 128 HHAIVAAPLYISHASKLYKNLVADRGHMDFVGINLALTPLHLHVGFVHALPYYVLVLIAV 187 Query: 499 LSMFIQMK----MSPPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 ++Q++ +P A Q VVF PAG+ +Y+ S + Sbjct: 188 GIQYLQIQQIASKNPTAAAANRSALLTQQ----LTTVVFGVIYLDVPAGVAVYFLVSGLF 243 Query: 549 SIVQQAVIMKMHGA 562 + QQ V+ + Sbjct: 244 RVAQQEVMWRRDPV 257 >gi|6117974|gb|AAF03934.1|AF139908_4 membrane protein homolog [Listeria monocytogenes] Length = 237 Score = 92.7 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 39/250 (15%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ-------- 393 I +M + GN+GIAI++TT+ ++ L PL + + M++ Sbjct: 1 IQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEID 60 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLE 452 L+ + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I S E Sbjct: 61 EIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSE 120 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + + + W +L + D + II L Q +S Sbjct: 121 IA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSMIGY 157 Query: 513 DKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE---IG 565 Q + + P++ +F + P+ L +YW+ + Q + K++ + I Sbjct: 158 SPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHPEIK 217 Query: 566 LIDRLRSTFS 575 ++++ F Sbjct: 218 VMEQEEKEFE 227 >gi|52786308|ref|YP_092137.1| OxaA-like protein precursor [Bacillus licheniformis ATCC 14580] gi|319645111|ref|ZP_07999344.1| YqjG protein [Bacillus sp. BT1B_CT2] gi|52348810|gb|AAU41444.1| YqjG [Bacillus licheniformis ATCC 14580] gi|317392920|gb|EFV73714.1| YqjG protein [Bacillus sp. BT1B_CT2] Length = 274 Score = 92.7 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 34/216 (15%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP--------KIDELREKFKQSP 407 GN+G++I+ T+ V++L FPL QY M+ L++ Sbjct: 59 FHGNYGLSIIFVTIIVRVLVFPLFANQYKKQRAMQEKMALVKPELDAIQSRLKKTKDPVK 118 Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + +Q+ M+QLY+ HNINPL GC P+L+Q P+ Y I + E+ Sbjct: 119 QREIQQEMMQLYQKHNINPLAMGCLPMLIQFPILIGFYYAIRSTPEIA------------ 166 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-----PADKGQAMILN 521 ++ F F + + + G + + ++ K++ PA + A I+ Sbjct: 167 ----SHSFLWFNLGHSDIIVSLSAG---FMYFIQFYVSQKLNAQNAQSNPAAQQSAKIMG 219 Query: 522 -WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + PV+ + PA L +YW S ++ +Q V+ Sbjct: 220 FFFPVMMTIFSINVPAALPLYWLTSGLLLTIQSVVL 255 >gi|255025839|ref|ZP_05297825.1| OxaA-like protein precursor [Listeria monocytogenes FSL J2-003] Length = 229 Score = 92.7 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 99/242 (40%), Gaps = 39/242 (16%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ--------PKIDELRE 401 M + GN+GIAI++TT+ ++ L PL + + M++ L+ Sbjct: 1 MFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKR 60 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I S E+ + + Sbjct: 61 ATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIA-SHTFL 119 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMIL 520 W +L + D + II L Q +S Q + Sbjct: 120 WF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSMIGYSPEQKKQM 157 Query: 521 NWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE---IGLIDRLRST 573 + P++ +F + P+ L +YW+ + Q + K++ + I ++++ Sbjct: 158 KIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHPEIKVMEQEEKE 217 Query: 574 FS 575 F Sbjct: 218 FE 219 >gi|52080933|ref|YP_079724.1| OxaA-like protein [Bacillus licheniformis ATCC 14580] gi|52004144|gb|AAU24086.1| translocase for membrane proteins OxaA2 [Bacillus licheniformis ATCC 14580] Length = 273 Score = 92.7 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 34/216 (15%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP--------KIDELREKFKQSP 407 GN+G++I+ T+ V++L FPL QY M+ L++ Sbjct: 58 FHGNYGLSIIFVTIIVRVLVFPLFANQYKKQRAMQEKMALVKPELDAIQSRLKKTKDPVK 117 Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + +Q+ M+QLY+ HNINPL GC P+L+Q P+ Y I + E+ Sbjct: 118 QREIQQEMMQLYQKHNINPLAMGCLPMLIQFPILIGFYYAIRSTPEIA------------ 165 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-----PADKGQAMILN 521 ++ F F + + + G + + ++ K++ PA + A I+ Sbjct: 166 ----SHSFLWFNLGHSDIIVSLSAG---FMYFIQFYVSQKLNAQNAQSNPAAQQSAKIMG 218 Query: 522 -WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + PV+ + PA L +YW S ++ +Q V+ Sbjct: 219 FFFPVMMTIFSINVPAALPLYWLTSGLLLTIQSVVL 254 >gi|172041701|ref|YP_001801415.1| putative inner membrane protein translocase component YidC [Corynebacterium urealyticum DSM 7109] gi|171853005|emb|CAQ05981.1| preprotein translocase YidC subunit [Corynebacterium urealyticum DSM 7109] Length = 324 Score = 92.7 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 111/312 (35%), Gaps = 62/312 (19%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F +F K ++ + + ++I+ V +++L Q S+ Sbjct: 3 NFIYYPISAVLWFWHKVFGYVLDPTAGIT--WALSIVFLVVTIRILLVKPTANQLRSSRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447 M+ QPK+ EL+ K+ Q L + + + + P+A C P+L+Q+P+F ++ V+ Sbjct: 61 MQEFQPKMKELQRKYAN-DQQKLMVEVRKAQQEMGVRPMAACLPMLVQMPIFIGLFHVLR 119 Query: 448 -------------SISLEMRHAPFWGW-----------------IKDLAAADP--TNIFT 475 E R+ P + + + + DP F+ Sbjct: 120 SFNRTGTGTGQLGMSIEETRNTPNYVFGVEEVQSFLDARLFGAPLSSYISMDPSGYGAFS 179 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLS--MFIQMKMSPPPADKGQAM--------------- 518 GI P + + + P+++ + M ++S K QA Sbjct: 180 PAGIAPDFTKANIIAVVLPLMLGAAVIMHFTARLSLNRNKKRQANNPKPAADDLKAQQMQ 239 Query: 519 ---------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 +L +MP++ + + GL +Y + + + +QQ ++ + E + Sbjct: 240 MQMDMMQRIMLWFMPLIILAGGFLWQVGLALYMFTNGLWTFIQQRILFGIMDKEEEEERQ 299 Query: 570 LRSTFSKNYNSQ 581 + + + Sbjct: 300 AKLEARRTSAPK 311 >gi|115757014|ref|XP_784750.2| PREDICTED: similar to Oxa1l protein [Strongylocentrotus purpuratus] gi|115961416|ref|XP_001176782.1| PREDICTED: similar to Oxa1l protein [Strongylocentrotus purpuratus] Length = 228 Score = 92.4 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 30/150 (20%) Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKDLAAA 468 + Q K +++NPL ILLQ P+F + ++ ++ +E W DL + Sbjct: 1 MELQQFMKKNDVNPLKSFAGILLQAPIFISFFIGLRRMATLPVESMQTGGLWWFTDLTTS 60 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM------SPPPADKGQAMILNW 522 DP P+I SLSMF+ M++ S A K +L Sbjct: 61 DPYY-------------------ALPVIASLSMFLVMELGGEAGVSNAQAQKM-RNVLRV 100 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 MP V + ++S P + YW SN S+ Q Sbjct: 101 MPFVVLPFIASLPKAVFCYWLTSNFFSVFQ 130 >gi|148989975|ref|ZP_01821250.1| SpoIIIJ family protein [Streptococcus pneumoniae SP6-BS73] gi|149003634|ref|ZP_01828499.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69] gi|237650993|ref|ZP_04525245.1| OxaA-like protein precursor [Streptococcus pneumoniae CCRI 1974] gi|237822551|ref|ZP_04598396.1| OxaA-like protein precursor [Streptococcus pneumoniae CCRI 1974M2] gi|147758366|gb|EDK65366.1| SpoIIIJ family protein [Streptococcus pneumoniae SP14-BS69] gi|147924635|gb|EDK75721.1| SpoIIIJ family protein [Streptococcus pneumoniae SP6-BS73] Length = 308 Score = 92.4 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 77/209 (36%), Gaps = 24/209 (11%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 ILLQ+P F AIY + + A + G +P P + V Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ L + + + Q + +M P++ V PA + +YW + I+ Sbjct: 184 AGVLYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 QQ ++ + L ++R +KN + Sbjct: 244 QQFIVN--YIVRPKLRKKVREELAKNPSK 270 >gi|308804920|ref|XP_003079772.1| putative cytochrome oxidase assembly protein (ISS) [Ostreococcus tauri] gi|116058229|emb|CAL53418.1| putative cytochrome oxidase assembly protein (ISS) [Ostreococcus tauri] Length = 337 Score = 92.4 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 41/251 (16%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E++ + + M YF+ + +AI+ TVF++ + FPL Q +TA M Sbjct: 60 EVVPVAVQSWPTTAALMYAMEYFHVAHGLEWWLAIVGATVFMRTVTFPLVVMQMRNTARM 119 Query: 390 KNIQPKIDELREKFKQSPPQ------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + +P+++ L+ K K +P Q M +++K +++NP P+L+ PVF + Sbjct: 120 QLCKPELEALQAKMKSNPSQDPELATAYYAEMQKVWKKYDVNPFKSFAPVLINAPVFISF 179 Query: 444 YKVISI------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 Y IS S E + DL+ ADPT PI+ Sbjct: 180 YFAISKMAAGVPSFETGGPSMY---PDLSIADPTYS-------------------LPILS 217 Query: 498 SLSMFIQMKM-SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 SL+ +++ + Q+ + W V V +SFP G+ +YW SN+ S VQ Sbjct: 218 SLTFLASVELGTVEGMQTSQSAQMKWFLRALAVAMVPLTASFPQGVFVYWITSNMFSGVQ 277 Query: 553 QAVIMKMHGAE 563 + I + G + Sbjct: 278 TS-ITRTKGFK 287 >gi|260103137|ref|ZP_05753374.1| membrane protein OxaA [Lactobacillus helveticus DSM 20075] gi|260083047|gb|EEW67167.1| membrane protein OxaA [Lactobacillus helveticus DSM 20075] Length = 320 Score = 92.4 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 47/268 (17%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYVS 385 G + ++ + + + + G I++ TV V+L+ PL Q Sbjct: 33 APHSGIYGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQNK 92 Query: 386 TANMKNIQPKIDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCWPIL 434 + + ++ ++ K Q+ +LY + ++ GC P++ Sbjct: 93 SVRQQEKMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLPLI 152 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ + IY+ + S ++ H+ F+G L+ + Sbjct: 153 IQLPIMWGIYQAVFYSPQLAHSTFFG--ISLSQK---------------------SVVLA 189 Query: 495 IIMSLSMFIQMKMS----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 II ++ IQ +S P K ++ + P++ +F SF L +YW+ N++ I Sbjct: 190 IIATIFTVIQGYISLIGIPEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLVMI 249 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 +QQ ++ + + + Sbjct: 250 IQQVIVTFILT--PSVKKHIADELKDKP 275 >gi|302388594|ref|YP_003824416.1| membrane protein insertase, YidC/Oxa1 family [Clostridium saccharolyticum WM1] gi|302199222|gb|ADL06793.1| membrane protein insertase, YidC/Oxa1 family [Clostridium saccharolyticum WM1] Length = 427 Score = 92.0 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 84/258 (32%), Gaps = 33/258 (12%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + LV I L V + + + K +D + Sbjct: 105 YGTSMTGGCVQLVIQMPILFALYQVIYHIPAYVQSVKAVYENVVTAINSLGVDHVGML-- 162 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI-PVFFAIYKVISISL---------EMR 454 Q I L + +++ G L Q+ P ++ +V+ S+ ++ Sbjct: 163 ---TQFAADNKINLSRIGSLSSSNGMVDYLYQLNPSQWSSLQVLFPSIKETIAVNAAQIS 219 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------ 508 H + I + + P F + PI+ LS + ++ Sbjct: 220 HMNSFLGINLASTP------SSVLFPPGGGFHFSLAILIPILAGLSQWFSTRLMTVNQPQ 273 Query: 509 -----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + MP++ VF +F +G+ IYW S+V I+QQ + + H + Sbjct: 274 HGNDENNTMAQSMKSMNTIMPLMSVFFCFTFASGIGIYWIASSVFQIIQQVAVNR-HLNQ 332 Query: 564 IGLIDRLRSTFSKNYNSQ 581 I + + ++ K + Sbjct: 333 IDMDEMIKKNVEKANKKR 350 >gi|298709559|emb|CBJ48574.1| Oxa1 or Cox18/Oxa2 homolog, mitochondrial integral inner membrane protein [Ectocarpus siliculosus] Length = 552 Score = 92.0 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 73/220 (33%), Gaps = 30/220 (13%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 ++M + + +L + + + + ++ Sbjct: 254 YWEAIVMVSVAARIAVLPAVATFLGMSKRLNMIKPEMAVHQGKMQDIKNRMEANPEIKEA 313 Query: 404 KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS---LEMRHAPFWG 460 + ++ + M L K H I+ + Q PVF +++ Sbjct: 314 AMAEMMLVSQEMGNLLKQHRIHFPKMMLSMFAQFPVFISLFLATRDMGTYFPGYMTGGLD 373 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADK--- 514 W+ +L A DPT PI+ S SM + M++ P Sbjct: 374 WMMNLNAPDPTWT-------------------LPILTSGSMILLMELGSDMPAAHGPDKP 414 Query: 515 --GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ M VVFV S PAG+++YW+ +NV ++Q Sbjct: 415 NFNPKVMFRVMSVVFVPVAFSMPAGVLVYWTTTNVFGMLQ 454 >gi|299143467|ref|ZP_07036547.1| stage III sporulation protein J [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517952|gb|EFI41691.1| stage III sporulation protein J [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 232 Score = 92.0 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 21/209 (10%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 F ++I+++T+ +KLL P+ + M +QP+I++L++K++ P+ L QLY Sbjct: 24 FALSIIISTIIIKLLVVPINISMIKNQKKMAELQPEIEKLKKKYQN-DPKTLAVKQQQLY 82 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 K N N L+GC P++LQ V A Y+V P D A D + + Sbjct: 83 KEANYNMLSGCLPMILQFVVLIAFYRVFW-------EPAKYAFTDKAMFDAMSKNFFYIA 135 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQ---------MK-MSPPPADKGQAMILNWMPVVFVF 529 L I II +++ F+ K M ++ ++ MP++ Sbjct: 136 ---NLQEKDPTMILGIIAAITTFLTSFVSNQNPAQKTMQNKQSNSMMTSMMIVMPIMIFT 192 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 F +GL++YW+ SNV +IVQQ + + Sbjct: 193 MARKFQSGLVLYWTVSNVFAIVQQLITNR 221 >gi|213408000|ref|XP_002174771.1| inner membrane protein oxa1-2 [Schizosaccharomyces japonicus yFS275] gi|212002818|gb|EEB08478.1| inner membrane protein oxa1-2 [Schizosaccharomyces japonicus yFS275] Length = 368 Score = 92.0 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 85/252 (33%), Gaps = 41/252 (16%) Query: 337 GWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 ++ + ++ + + +I T + +++L FPL +++ M I P+ Sbjct: 85 THTWWPYPYLQSILEVIHVYSGMPWWASIAATAIGMRVLMFPLMLGMIRTSSRMAAIGPQ 144 Query: 396 IDELREKFKQSP-------PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 + + Q + +LYK + INP+ +Q +F + + + Sbjct: 145 VAGHMATLHGARLAGDSLAMQKATLEVQRLYKENGINPMRLLRAPFIQGILFVSFFYALK 204 Query: 449 ISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + +GW+ DL DP + PI L M+ Sbjct: 205 TMADFPVPGLEHGGFGWVMDLTKPDPMH-------------------AIPIANGLLMWAN 245 Query: 505 MKM------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-- 556 +++ + P M + +FP + +YW SN+ SI Q + Sbjct: 246 IELGSENGTNKSPVAPSMKRFFRLMCLASPLFTMNFPMAIFMYWLPSNLFSIFQGFFLRS 305 Query: 557 --MKMHGAEIGL 566 ++ + + Sbjct: 306 KRIRRYLDIPEI 317 >gi|291541858|emb|CBL14968.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Ruminococcus bromii L2-63] Length = 335 Score = 92.0 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 58/286 (20%), Positives = 117/286 (40%), Gaps = 65/286 (22%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 F F+ + ++ + L+ +FG++I++ T+ V+L FP KQ S A + K Sbjct: 1 MQIFGFLGSLLGYVLWGAFYLLKDFGLSIIVFTIIVRLCMFPFTIKQQKSMAGTARLSKK 60 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI----LLQIPVFFAIYKVISISL 451 E++EK+K + Q Q+ + +LY+ + P GC + L+ VF+A+ ++ +L Sbjct: 61 QKEIQEKYKNNR-QKAQEEISKLYEKEGVKPTGGCLTMIVPFLVLFGVFYAVAYPLTNTL 119 Query: 452 EMRHAP--------------------------FWGWIKDLA------------AADPTNI 473 + A ++KD + +AD N Sbjct: 120 HIDSAKVTEALNYVNTIPGYTAASGATNATYQEIYFLKDFSCFQNIDAIQQIFSADQLNT 179 Query: 474 FTLF-----------GILPFYLPGFMHVGIWPII----MSLSMFIQMKMSPPPADKGQAM 518 T+F +P + + ++P+I L+ FI M+++ + Q Sbjct: 180 ITMFEKGFNTFGMNLFAIPQDYGLWSPMILFPVICFASNVLTQFITMRINGKN-NPMQQQ 238 Query: 519 ------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 ++ MP+ + P+ + YW S+++S+VQ ++ K Sbjct: 239 QGCMKVMMYAMPLFSAYIAYIVPSAVAFYWIVSSLVSLVQSVIVGK 284 >gi|227431097|ref|ZP_03913155.1| Oxa1 family cytochrome oxidase biogenesis protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227353137|gb|EEJ43305.1| Oxa1 family cytochrome oxidase biogenesis protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 307 Score = 92.0 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 95/268 (35%), Gaps = 43/268 (16%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNL---VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + +I +P+ LM+ + V G AI++ T +L+ P Q V+T Sbjct: 23 GYNQHSRMYRWIGQPLAELMTNIAHFIGGVNGIGWAIIVITAIFRLILLPFFLNQQVNTT 82 Query: 388 NMKNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQI 437 + K+ R+ Q AM+ LY+ ++++ + G + +Q+ Sbjct: 83 VNQIKMQKLKPEIDKLQTLSRKAATTEEQQKASMAMMSLYRENDVSVIGGISFLTMAMQL 142 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 P+F +Y I + ++ A F G+ DL ++ I+ Sbjct: 143 PIFSGLYSAILHAPALQGASFLGF--DLGKP---------------------QLVFAIVA 179 Query: 498 SLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + IQ + + Q ++ PV+ + +Y+ + +++Q Sbjct: 180 GIIYLIQAWLMMQHMPEEQRKTSAAMMLVSPVMIFVFAMIASGAIGLYFVIGGIFALIQT 239 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + H GL R+ + F + Sbjct: 240 LI---QHYQRPGLEKRVTAEFKIQKTAD 264 >gi|266620970|ref|ZP_06113905.1| stage III sporulation protein J [Clostridium hathewayi DSM 13479] gi|288867392|gb|EFC99690.1| stage III sporulation protein J [Clostridium hathewayi DSM 13479] Length = 428 Score = 92.0 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 41/338 (12%), Positives = 97/338 (28%), Gaps = 16/338 (4%) Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 +A+V + F + F+ ++ ++ + P + Sbjct: 16 FATVLGIIMDWLFKLTSIFGIQNIGLCIILFTLVTKLLMFPLTLKQQKSSKLMSIMQPEL 75 Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 + + + + + A S + +L ++ + P Sbjct: 76 NAIQAKYKGKKDQESMMKQNVEIQALYEKYGTSMTGGCLQLVIQMPILFALYQVIYHIPA 135 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-LAGCWPIL--L 435 + + K + + K N L L Sbjct: 136 YVSSVKDVFMNVVTSITSLGVDHVGMLTQFATDNKVNMAMVKDMATNNGLVDFLYQLNPT 195 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-P 494 Q ++ I ++ A L + F++ F + I P Sbjct: 196 QWSALQDLFPSIQGTIVENAAKIEHMNSFLGINLASTPFSVMFPNGFTGGFHFSLAILIP 255 Query: 495 IIMSLSMFIQMKMSP-----------PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 I+ LS ++ ++ + M+ MP++ VF +F +G+ IYW Sbjct: 256 ILAGLSQWLSARLMTVNQPSTGNDDGNSMAQSMKMMNTMMPLMSVFFCFTFASGIGIYWI 315 Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 S+V ++QQ ++ + I + + ++ K + Sbjct: 316 ASSVFQVIQQVLVNRYMD-RIDIDEMVKQNVEKANKKR 352 >gi|148927718|ref|ZP_01811160.1| 60 kDa inner membrane insertion protein [candidate division TM7 genomosp. GTL1] gi|147886931|gb|EDK72459.1| 60 kDa inner membrane insertion protein [candidate division TM7 genomosp. GTL1] Length = 320 Score = 92.0 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 120/281 (42%), Gaps = 44/281 (15%) Query: 341 FIAKPMFMLMSYFYNLVGN-FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + +L++ + + GN FG+A+++ T+ V+ +PL KKQ T M+ IQP++ ++ Sbjct: 5 IVQPIFNVLLAIYGIIPGNDFGVALIIFTILVRFAMWPLLKKQLHQTRLMRQIQPELKKV 64 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH---- 455 + + K + + + M++LY+ + P + +L+Q+P+F A+++VI I RH Sbjct: 65 KARAKGNK-MLESQMMMELYRERGVRPFSSIGLLLIQLPIFIALFRVIQILTSQRHDISR 123 Query: 456 -----APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP------IIMSLSMFIQ 504 G I++L A LFG++ G++ I+ ++ +IQ Sbjct: 124 YTYDFMQNLGAIRELVAHPDKFNEMLFGVINLTQHAVTSQGVYVPLLLLAILAAVLQYIQ 183 Query: 505 MKMSPPPADK-------------------------GQAMILNWMPVVFVFALSSFPAGLI 539 K P D ++ +P V F P L+ Sbjct: 184 SKQVLPQQDSKKKLRDILKDSSKGKAVDQSEVTAIMSGRMIMLLPAVLFFIGLYLPGALV 243 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 +Y++ S++++I QQ V++ E+ I + Sbjct: 244 LYYAVSSLVAIAQQRVVLSKDLEEMETIA--DKDNKRTPKK 282 >gi|89097506|ref|ZP_01170395.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911] gi|89087802|gb|EAR66914.1| OxaA-like protein precursor [Bacillus sp. NRRL B-14911] Length = 262 Score = 91.6 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 89/231 (38%), Gaps = 36/231 (15%) Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 GNFG++I+L T+ ++L PL KQY +MK + +K + + Sbjct: 50 MVAELFNGNFGLSIILITLIIRLALMPLMLKQYKRQQDMKGKMDVLKPEMDKIQAQLKKT 109 Query: 411 LQKA--------MIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 + M LY+ H +NPL GC PIL+Q+P+ Y I S E+ + W Sbjct: 110 KDQKEQQKLQQEMFALYRKHGVNPLNMGCLPILIQMPILMGFYYAIRSSHEIATHS-FLW 168 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN 521 +L D + + ++Q K++ Q + Sbjct: 169 F-NLGQPD---------------------LLITAAAGIVYYLQFKVTQANMPVQQQNQMK 206 Query: 522 WM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 +M PV+ V S PA L +YW+ IVQ + +++ + Sbjct: 207 FMGLLSPVMIVVFSFSAPAALPLYWTVGGTFLIVQTLIGRRLYQTAPAAKE 257 >gi|108802369|ref|YP_642566.1| putative inner membrane protein translocase component YidC [Mycobacterium sp. MCS] gi|119866062|ref|YP_936014.1| putative inner membrane protein translocase component YidC [Mycobacterium sp. KMS] gi|108772788|gb|ABG11510.1| 60 kDa inner membrane insertion protein [Mycobacterium sp. MCS] gi|119692151|gb|ABL89224.1| 60 kDa inner membrane insertion protein [Mycobacterium sp. KMS] Length = 367 Score = 91.6 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 94/270 (34%), Gaps = 39/270 (14%) Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 +++ + + +++M ++ + + +Q Sbjct: 2 FNWFSLDIIYYPVSAIMWVWYKAFAFLLGPDNFFAWALSVMFLVFTLRAILYKPFVRQIR 61 Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +T M+ +QP+I L++K+ Q + M +L K H NP+ GC P+L QIPVF +Y Sbjct: 62 TTRQMQELQPQIKALQKKY-GKDRQRMALEMQKLQKEHGFNPILGCLPMLAQIPVFLGLY 120 Query: 445 KVISI-------------SLE--------MRHAPFWGWIKD---LAAADPTNIFTLFGIL 480 V+ S+E + A G D A + G+ Sbjct: 121 HVLMSFNRTQTGIGRLGLSVEENRSLPNYLFSATDVGHFLDANLFGAPLGATMIQQHGLE 180 Query: 481 PFY----LPGFMHVGIWPIIMSLSMFIQM-----KMSPPPADKGQAMIL-----NWMPVV 526 F + + ++ ++ + +P A Q ++ P+ Sbjct: 181 AFTEFNRVAVVVVGVPIMLLAGIATHFNSRASVARQTPEAAANPQTALMNKLALYVFPLG 240 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V P +I+YW +N+ + QQ + Sbjct: 241 VVVGGPFLPLAVIMYWLANNIWTYGQQHYV 270 >gi|328464786|gb|EGF36101.1| hypothetical protein AAULH_09168 [Lactobacillus helveticus MTCC 5463] Length = 320 Score = 91.6 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 47/268 (17%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYVS 385 G + ++ + + + + G I++ TV V+L+ PL Q Sbjct: 33 APHSGIYGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQNK 92 Query: 386 TANMKNIQPKIDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCWPIL 434 + + ++ ++ K Q+ +LY + ++ GC P++ Sbjct: 93 SVRQQEKMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLPLI 152 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ + IY+ + S ++ H+ F+G L+ + Sbjct: 153 IQLPIMWGIYQAVFYSPQLAHSTFFG--ISLSQK---------------------SVVLA 189 Query: 495 IIMSLSMFIQMKMS----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 II ++ IQ +S P K ++ + P++ +F SF L +YW+ N++ I Sbjct: 190 IIATIFTVIQGYISLIGIPEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLVMI 249 Query: 551 VQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 +QQ ++ + + + Sbjct: 250 IQQVIVTFILT--PSVKKHVADELKDKP 275 >gi|257065515|ref|YP_003145187.1| preprotein translocase subunit YidC [Slackia heliotrinireducens DSM 20476] gi|256793168|gb|ACV23838.1| preprotein translocase subunit YidC [Slackia heliotrinireducens DSM 20476] Length = 257 Score = 91.6 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 51/225 (22%), Positives = 106/225 (47%), Gaps = 9/225 (4%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +F + +F N+ G++G+AI++ TV +++ P+ Q S+ M+ +QP + Sbjct: 1 MWEAFKDWIFDCIQFFANVCGDWGLAIIIITVIFRVIVSPIMHSQIKSSYQMQKVQPLMQ 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 E++ K+ +Q+ M +LY + NPLAGC P+ LQ+P+F A+++ + E+ Sbjct: 61 EIQTKYAN-DQARMQEEMQKLYAETHFNPLAGCLPMFLQMPIFIAMFQTLR---ELASHG 116 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 + T + F+ + ++ + + F+ M + +D Q Sbjct: 117 TGEVYTFYTIVEDLTK-TPKDMWAVGFGDFLPYLVLMLVFAFATFVPMMLQNMKSDSAQR 175 Query: 518 MILNWMPVVFV----FALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + M + + S PAG++++W S++I I QQ + + Sbjct: 176 NQMLIMGGMMTLMMLWISWSSPAGVLLFWGASSIIGIAQQQITQR 220 >gi|161507844|ref|YP_001577808.1| hypothetical protein lhv_1585 [Lactobacillus helveticus DPC 4571] gi|160348833|gb|ABX27507.1| hypothetical protein lhv_1585 [Lactobacillus helveticus DPC 4571] Length = 320 Score = 91.6 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 100/270 (37%), Gaps = 47/270 (17%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQY 383 + G + ++ + + + + G I++ TV V+L+ PL Q Sbjct: 31 NIAPHSGIYGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQ 90 Query: 384 VSTANMKNIQPKIDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCWP 432 + + ++ ++ K Q+ +LY + ++ GC P Sbjct: 91 NKSVRQQEKMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLP 150 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +++Q+P+ + IY+ + S ++ H+ F+G L+ + Sbjct: 151 LIIQLPIMWGIYQAVFYSPQLAHSTFFG--ISLSQK---------------------SVV 187 Query: 493 WPIIMSLSMFIQMKMS----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 II ++ IQ +S P K ++ + P++ +F SF L +YW+ N++ Sbjct: 188 LAIIATIFTVIQGYISLIGIPEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLV 247 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 I+QQ ++ + + + Sbjct: 248 MIIQQVIVTFILT--PSVKKHVADELKDKP 275 >gi|15903832|ref|NP_359382.1| OxaA-like protein precursor [Streptococcus pneumoniae R6] gi|116517062|ref|YP_817195.1| OxaA-like protein precursor [Streptococcus pneumoniae D39] gi|38503005|sp|Q8DNE1|OXAA2_STRR6 RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|15459474|gb|AAL00593.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116077638|gb|ABJ55358.1| SpoIIIJ family protein [Streptococcus pneumoniae D39] Length = 308 Score = 91.6 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 76/209 (36%), Gaps = 24/209 (11%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 ILLQ+P F AIY + + A + G +P P + V Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG-------------------IPLGSPSMILVAC 183 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ L + + + Q + +M P++ V PA + +YW + I+ Sbjct: 184 AGVLYYLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMIL 243 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 QQ ++ + L ++ +KN + Sbjct: 244 QQFIVN--YIVRPKLRKKVHEELAKNPSK 270 >gi|307707578|ref|ZP_07644059.1| membrane protein OxaA 2 [Streptococcus mitis NCTC 12261] gi|307616291|gb|EFN95483.1| membrane protein OxaA 2 [Streptococcus mitis NCTC 12261] Length = 308 Score = 91.6 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 93/259 (35%), Gaps = 38/259 (14%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--------FPLAKKQYVSTA 387 + W F A + + + FG+AI++ T+ V+L+ + A Sbjct: 36 FIWNTFGAPMAEAIKYFATDQGLGFGMAIIIVTIIVRLIILPLGIYQSWKATLHSEKMNA 95 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 ++P L+E Q Q+A+ K H I+ GC+PILLQ+P F AIY Sbjct: 96 LKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFPILLQMPFFSAIYF 155 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + A + G L + + G+L + G+ Sbjct: 156 AAQHTEGVAQASYLG--IPLGSP-SMILVACAGVLYYLQSLLSLHGV------------- 199 Query: 506 KMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 D+ Q + P+ V PA + +YW + I+QQ ++ + Sbjct: 200 ------EDETQREQIKKMAYVSPITIVVFSLISPASVTLYWVVGGFMMILQQFIVN--YI 251 Query: 562 AEIGLIDRLRSTFSKNYNS 580 L ++R +KN Sbjct: 252 VRPKLRKKVREELAKNPPK 270 >gi|325696358|gb|EGD38249.1| SpoIIIJ family protein [Streptococcus sanguinis SK160] Length = 296 Score = 91.6 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391 W + + N +G+AI++ T+ V+++ + K + + M Sbjct: 24 LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 83 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 +P ++E+ K + Q Q+ ++ K + ++ GC P+L+Q+P F A++ Sbjct: 84 FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 143 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + + WIKDLA +D I+ + +IQ Sbjct: 144 AAQYTQGVAGSS-FLWIKDLAKSD---------------------LALTAIVGILYYIQS 181 Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D+ Q + +M P++ V PA + +YW I I+ + + Sbjct: 182 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINY 239 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 L ++ F KN Sbjct: 240 IIRPRLRKQVAEEFEKNPPK 259 >gi|317032058|ref|XP_001393915.2| hypothetical protein ANI_1_1524084 [Aspergillus niger CBS 513.88] Length = 496 Score = 91.2 bits (224), Expect = 4e-16, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 93/246 (37%), Gaps = 32/246 (13%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + + + + + +F+ + G I+ T +FV+L ++ + Sbjct: 121 KQLGLDFGWGFSSMIEYSVEHFHIMGGLPWWGAIVATGLFVRLGLLYPTLMAADTSTKLN 180 Query: 391 NIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 NI+ LR + Q+ + + + QL+K H I P P+ + IP F Sbjct: 181 NIKHLTTPLRTEMVQANYKNDLMEATRKRAELSQLHKDHGIKPWKAMIPM-IHIPFGFGC 239 Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 Y+V++ + W++DL +DP I L G + + Sbjct: 240 YRVVNNMCSLPVPGLTTEHVAWLQDLTVSDPYYILPLIGSVILHHTLKKG--------GE 291 Query: 500 SMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-- 556 + QMK D + + MP + +++FP L +Y+ ++V ++ Q ++ Sbjct: 292 TGMNQMK------DSAFKSLFLYGMPTISFLFMANFPGALQLYFLTTSVFALGQTYLLSS 345 Query: 557 --MKMH 560 + Sbjct: 346 ATFRKM 351 >gi|16079445|ref|NP_390269.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. 168] gi|221310308|ref|ZP_03592155.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. 168] gi|221314632|ref|ZP_03596437.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319555|ref|ZP_03600849.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. JH642] gi|221323831|ref|ZP_03605125.1| OxaA-like protein precursor [Bacillus subtilis subsp. subtilis str. SMY] gi|321311869|ref|YP_004204156.1| OxaA-like protein [Bacillus subtilis BSn5] gi|1731070|sp|P54544|OXAA2_BACSU RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|1303958|dbj|BAA12613.1| YqjG [Bacillus subtilis] gi|2634823|emb|CAB14320.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. subtilis str. 168] gi|320018143|gb|ADV93129.1| OxaA-like protein precursor [Bacillus subtilis BSn5] Length = 275 Score = 91.2 bits (224), Expect = 4e-16, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 36/219 (16%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE--------LREKFKQSP 407 G +G++I+L T+ V+++ PL Q+ + I L++ Sbjct: 59 FHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRIFQEKMAVIKPQVDSIQVKLKKTKDPEK 118 Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + LQ M++LY+ HNINPL GC P+L+Q P+ +Y I + E+ + W L Sbjct: 119 QKELQMEMMKLYQEHNINPLAMGCLPMLIQSPIMIGLYYAIRSTPEIASHS-FLWFS-LG 176 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------PPPADKGQ-AMI 519 +D + I+ + +I K+S P Q A + Sbjct: 177 QSDILMSLSAG-----------------IMYFVQAYIAQKLSAKYSAVPQNPAAQQSAKL 219 Query: 520 LNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + PV+ + PA L +YW S + VQ V+ Sbjct: 220 MVFIFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNIVLQ 258 >gi|134078469|emb|CAK40411.1| unnamed protein product [Aspergillus niger] Length = 518 Score = 91.2 bits (224), Expect = 4e-16, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 93/246 (37%), Gaps = 32/246 (13%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + + + + + +F+ + G I+ T +FV+L ++ + Sbjct: 143 KQLGLDFGWGFSSMIEYSVEHFHIMGGLPWWGAIVATGLFVRLGLLYPTLMAADTSTKLN 202 Query: 391 NIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 NI+ LR + Q+ + + + QL+K H I P P+ + IP F Sbjct: 203 NIKHLTTPLRTEMVQANYKNDLMEATRKRAELSQLHKDHGIKPWKAMIPM-IHIPFGFGC 261 Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 Y+V++ + W++DL +DP I L G + + Sbjct: 262 YRVVNNMCSLPVPGLTTEHVAWLQDLTVSDPYYILPLIGSVILHHTLKKG--------GE 313 Query: 500 SMFIQMKMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-- 556 + QMK D + + MP + +++FP L +Y+ ++V ++ Q ++ Sbjct: 314 TGMNQMK------DSAFKSLFLYGMPTISFLFMANFPGALQLYFLTTSVFALGQTYLLSS 367 Query: 557 --MKMH 560 + Sbjct: 368 ATFRKM 373 >gi|296333458|ref|ZP_06875911.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675036|ref|YP_003866708.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. spizizenii str. W23] gi|296149656|gb|EFG90552.1| OxaA-like protein precursor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413280|gb|ADM38399.1| Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) [Bacillus subtilis subsp. spizizenii str. W23] Length = 275 Score = 91.2 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 86/223 (38%), Gaps = 44/223 (19%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE--------LREKFKQSP 407 G +G++I+L T+ V+++ PL Q+ + I L++ Sbjct: 59 FHGEYGLSIILVTIIVRVVVLPLFVNQFKKQRIFQEKMAVIKPQVDSIQAKLKKTKDPEK 118 Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + LQ M++LY+ HNINPL GC P+L+Q P+ Y I + E+ + W L Sbjct: 119 QKELQMEMMKLYQEHNINPLAMGCLPMLIQFPIVIGFYYAIRSTPEIASHS-FLWFS-LG 176 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ----MKMS------PPPADKGQ 516 +D + FIQ K+S P Q Sbjct: 177 QSDILVSLS---------------------AGAMYFIQAYVAQKLSAKYSAVPQNPAAQQ 215 Query: 517 -AMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 A ++ + PV+ + PA L +YW S + VQ V+ Sbjct: 216 SAKLMVFIFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNIVLQ 258 >gi|322778978|gb|EFZ09389.1| hypothetical protein SINV_15992 [Solenopsis invicta] Length = 279 Score = 91.2 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 98/233 (42%), Gaps = 35/233 (15%) Query: 340 YFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + + + NL + + I+ TV + L FPL + + N P I E Sbjct: 32 WSPSGIVQNFLEFMHINLNMPWWLTIVTATVCARALIFPLVINSQKNMIKVTNHMPVIQE 91 Query: 399 LREKFKQSPPQVLQKA-------MIQLYKTHNINPLAGCWPILLQIPVF----FAIYKVI 447 + ++ ++ M+Q K +N++ L+Q PVF FA+ K+ Sbjct: 92 MHQRLTEARNSGDHMESAKAATEMMQYMKKNNVSMTKNFMAPLIQAPVFISFFFALKKMA 151 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 ++ +E + W+KDL DP I PI+ S++MFI +++ Sbjct: 152 NLPVESLKEGGFLWVKDLTVYDPYY-------------------IMPIVTSVTMFITIEL 192 Query: 508 SPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 A+ + + +P + + + FP ++ YW +N +S++Q A + Sbjct: 193 GTDGANIHAMGMFRYVLRAVPFIALPFMLHFPGTILTYWVATNTVSLLQTAFL 245 >gi|300780240|ref|ZP_07090096.1| membrane protein OxaA [Corynebacterium genitalium ATCC 33030] gi|300534350|gb|EFK55409.1| membrane protein OxaA [Corynebacterium genitalium ATCC 33030] Length = 389 Score = 91.2 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 104/264 (39%), Gaps = 42/264 (15%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF----KQSPPQVLQKAM 415 + ++I L + V+ L P + S+ M ++P+ L E++ + +KA+ Sbjct: 32 WVLSICLLVLTVRGLLVPSYWSTFRSSRKMLMMRPEQIALEERYGASLEPDDITAHEKAL 91 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---SISLEMRHAPF-----------WGW 461 +L K + NPL+GC P L+Q+P +Y+++ S+ R + Sbjct: 92 KELNKEYGYNPLSGCIPPLVQLPFILGLYRLLIWMSVPENGRTGSDIGLLNPDDIAGFLE 151 Query: 462 IKDLAAADPTNI------FTLFGILPFYL-PGFMHVGIWPIIM-SLSMFIQMKMSPPPAD 513 L P + F G + + + I+ II + +MF+ S D Sbjct: 152 ASFLGVPLPAYVSMSQEQFAALGTTGDDVRAVAIPLLIFAIIFTTFNMFVSQLRSRVHMD 211 Query: 514 KGQAM----------ILNWMPVVFVFALSS--FPAGLIIYWSWSNVISIVQQ----AVIM 557 + M ++ +PV+ F + P L++YW SN+ ++ Q ++ Sbjct: 212 WNERMAVRIYDLMWWLMLLIPVMLGFVGMTGLIPIALLMYWFISNLWTLCQTAIMWYLLT 271 Query: 558 KMHGAEIGLIDRLRSTFSKNYNSQ 581 + + E ++ + + N + Sbjct: 272 RKYPLEPHHLEHVEEARTDAQNKE 295 >gi|290995957|ref|XP_002680549.1| predicted protein [Naegleria gruberi] gi|284094170|gb|EFC47805.1| predicted protein [Naegleria gruberi] Length = 226 Score = 90.8 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 80/208 (38%), Gaps = 32/208 (15%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-----A 414 + AIM TT+ + L PL ++A + ++P + E E +K Sbjct: 6 WYGAIMATTILFRCLVLPLNIGLTRNSARLDQVRPILFEKSEIMASKTASEEEKVQAAVE 65 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIY----KVISISLEMRHAPFWGWIKDLAAADP 470 + K + +PL L+ P+F +++ ++ E R W DL++ DP Sbjct: 66 FQETMKENKCHPLLNIISPLIMAPMFLSVFVSVERICLHDPECRGTGGLWWFDDLSSVDP 125 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM----ILNWMPVV 526 T P+I +++ I ++M ++ ++ V Sbjct: 126 TAT-------------------LPVISAVTWLISVEMGAAEPRTETMRQVRSVMRFVAAV 166 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQA 554 V + P+G+ +YW SN+ S++Q Sbjct: 167 MVPITGALPSGVFVYWITSNIFSMLQIY 194 >gi|213022848|ref|ZP_03337295.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 74 Score = 90.8 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%) Query: 501 MFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 MF KMSP D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 1 MFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 59 >gi|225352375|ref|ZP_03743398.1| hypothetical protein BIFPSEUDO_03992 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156882|gb|EEG70251.1| hypothetical protein BIFPSEUDO_03992 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 344 Score = 90.8 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 106/270 (39%), Gaps = 31/270 (11%) Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 + + + F++M + ++ ++I+ + V+ Sbjct: 3 QNQFLLDSGFWGWLYKLLYPVEWLMTQIMAVFHKFLVMLGMNEIGFSWVMSIVFLVLVVQ 62 Query: 373 LLFFPLAKKQYVSTANMK--------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 FPL K M+ +Q ++ + K + + +Q+ M++LY+ ++ Sbjct: 63 ACVFPLFYKSMKGMRKMQAQMTVLQPKMQRIQNKYKGKNDPASKEAMQREMMKLYQDNDA 122 Query: 425 NPLAGC---WPILLQIPVFFAIYKVISISLEM-RHA---PFWGWIKDLAAADPTNIFTLF 477 NP+ GC P+ +Q PVF ++ +S + R D+A A T+F Sbjct: 123 NPMGGCTSMLPMFVQGPVFMCMFYTLSAIPYIARGKFRDGQGLGAFDIATAKQFTSTTVF 182 Query: 478 GILPFY------LPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW 522 G+ + G + + I+ +M ++ K + + ++ W Sbjct: 183 GVNVADNFTTAAVHGKVVIAIFVALMCFCLWFMQYNSMKRNMAQSAANKQTEMMQKMMLW 242 Query: 523 M-PVVFVFALSSFPAGLIIYWSWSNVISIV 551 M P++++F+ + P +++YW +N+ +++ Sbjct: 243 MFPIMYIFSGIAMPFAVLVYWLTNNICNLL 272 >gi|323466128|gb|ADX69815.1| Preprotein translocase subunit YidC [Lactobacillus helveticus H10] Length = 324 Score = 90.8 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 96/264 (36%), Gaps = 39/264 (14%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYVS 385 G + ++ + + + + G I++ TV V+L+ PL Q Sbjct: 37 APHSGIYGWVYQWLGRPLQNIMIHTAHMVGGDNSAGWGIVIITVVVRLILMPLMLVQQNK 96 Query: 386 TANMKNIQPKIDE--------LREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCWPIL 434 + + ++ ++ K Q+ +LY + ++ GC P++ Sbjct: 97 SVRQQEKMARLQPQMKLIQAAMKHKGITPEQQMTLSGWQRELYSKNEMSLTGGIGCLPLI 156 Query: 435 LQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +Q+P+ + IY+ + S ++ H+ F+G + + I Sbjct: 157 IQLPIMWGIYQAVFYSPQLAHSTFFG-------------------ISLSQKSVVLAIIAT 197 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 I + +I + P K ++ + P++ +F SF L +YW+ N++ I+QQ Sbjct: 198 IFTVIQGYISLIGIPEEQKKTMQSMMIFNPIMTLFFSLSFSGALALYWAAGNLVMIIQQV 257 Query: 555 VIMKMHGAEIGLIDRLRSTFSKNY 578 ++ + + + Sbjct: 258 IVTFILT--PSVKKHVADELKDKP 279 >gi|167516128|ref|XP_001742405.1| hypothetical protein [Monosiga brevicollis MX1] gi|163779029|gb|EDQ92643.1| predicted protein [Monosiga brevicollis MX1] Length = 235 Score = 90.8 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 34/230 (14%) Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 L + + I TT+ ++ L PL + + NIQP++ ++ ++ + Sbjct: 18 FNTVMLDAPWAVGICATTILMRTLMLPLVFGSMRNNTILMNIQPQLQLHSQRIRECQTRN 77 Query: 411 LQ-------KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMRHAPFW 459 + L+K H ++PL G P+ +Q PVF + + + + +E Sbjct: 78 DHDGAAQAAANLNGLFKEHGVHPLKGLLPLFVQAPVFISFFMALRQMANLPIESMKTGGL 137 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADKGQ 516 W DL AADP + P+I S +M ++ + Sbjct: 138 LWFTDLTAADPYY-------------------VLPVIASATMLATIEFGSEGVKQNNVMM 178 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + + +V + + P + +YW +N+ S+ Q +++K+ G + L Sbjct: 179 KNVFRGLSIVLLPVTINLPTAIFVYWCTANMFSLSQ-MLMLKIPGLKKSL 227 >gi|199597202|ref|ZP_03210634.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001] gi|229552525|ref|ZP_04441250.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus rhamnosus LMS2-1] gi|258508719|ref|YP_003171470.1| preprotein translocase subunit YidC [Lactobacillus rhamnosus GG] gi|258539898|ref|YP_003174397.1| preprotein translocase YidC [Lactobacillus rhamnosus Lc 705] gi|199592006|gb|EDZ00081.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus HN001] gi|229314077|gb|EEN80050.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus rhamnosus LMS2-1] gi|257148646|emb|CAR87619.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus GG] gi|257151574|emb|CAR90546.1| Preprotein translocase subunit YidC [Lactobacillus rhamnosus Lc 705] gi|259650025|dbj|BAI42187.1| conserved hypothetical protein [Lactobacillus rhamnosus GG] Length = 330 Score = 90.8 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 105/262 (40%), Gaps = 42/262 (16%) Query: 337 GWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 ++ I P+ LM + V ++GIAI++ T+ V+L+ PL +Q + + Q Sbjct: 42 TFYKIIGLPLQHLMEWIAGFVGSTSSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQEKQ 101 Query: 394 PKIDELREKFKQSPPQVLQKAMIQ-----LYKTHNIN-----PLAGCWPILLQIPVFFAI 443 + + + + + + K ++ N P GC P+L+Q P+F + Sbjct: 102 KILQPQLKIVQDAVKRAKTPEQQMAANNYMRKIYSANGTSMIPSMGCLPMLIQFPIFSGL 161 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y+ I+ S E+ HA F+G + + I T+ LP+ + + + P Sbjct: 162 YQAIAYSPEISHATFFG----IQLGHSSFIVTILATLPYIIVSLIMLQGVP--------- 208 Query: 504 QMKMSPPPADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q + P++ + AGL +Y+ +I I+QQA++ Sbjct: 209 ----------PEQRKAMQATAFLSPIMTFVFCMMYNAGLGLYFGAGGIILIIQQAIVT-- 256 Query: 560 HGAEIGLIDRLRSTFSKNYNSQ 581 + + RL + +N + Sbjct: 257 YIVTPNIRKRLDAEMEENPPVE 278 >gi|324991296|gb|EGC23229.1| SpoIIIJ family protein [Streptococcus sanguinis SK353] gi|325687127|gb|EGD29150.1| SpoIIIJ family protein [Streptococcus sanguinis SK72] gi|332367395|gb|EGJ45128.1| SpoIIIJ family protein [Streptococcus sanguinis SK1059] Length = 307 Score = 90.8 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391 W + + N +G+AI++ T+ V+++ + K + + M Sbjct: 35 LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 +P ++E+ K + Q Q+ ++ K + ++ GC P+L+Q+P F A++ Sbjct: 95 FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + + WIKDLA +D I+ + +IQ Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------LALTAIVGILYYIQS 192 Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D+ Q + +M P++ V PA + +YW I I+ + + Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINY 250 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 L ++ F KN Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270 >gi|193217059|ref|YP_002000301.1| putative inner membrane protein translocase component YidC [Mycoplasma arthritidis 158L3-1] gi|193002382|gb|ACF07597.1| preprotein translocase subunit YidC [Mycoplasma arthritidis 158L3-1] Length = 650 Score = 90.8 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 58/405 (14%), Positives = 132/405 (32%), Gaps = 21/405 (5%) Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDI 237 +F+I+ T ++ + P+ + + + G A L + ++ Sbjct: 248 DIFQILTNETLKYWEEHQNDPKLKWYKEFKDLIASENGTTFLEKATAYFNKLKTKVSANE 307 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + E N + Y I S + + + N + Sbjct: 308 NEDKGLTTSEGNIVANFARSY--RAAIGSYLQLTKHILGSRVENGTQIYSITHINNLGNY 365 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV 357 S+ ++ F + + + + F L F+ + L + ++++ Sbjct: 366 SKDSLLSSLFDANSSTPQKALATAKDYWGLGPFYGLFVQPVNLFMNAIITGLGTTGWSVI 425 Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE-KFKQSPPQVLQKAMI 416 + +++ + + F Q + + E K + Q Q + Sbjct: 426 LALVVTVIIVRLIAFAVSFKATFSQSRMEEFNQKKAKIEAKYAEYKSDKQMQQRKQLEIA 485 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LYK I+P +G + +P+ ++++IS S E++ A ++ + + + + Sbjct: 486 ELYKKEKISPWSGLISSFITLPILIVVFRIISASPEIKQATWY----SIQLSTSSIRRVI 541 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA-------MILNWMPVVFVF 529 G L + VGI + + + K A+ Q N + ++F+ Sbjct: 542 AGDLIYLPIIIFSVGIQALAQYMPKILNRKKKSLRANAYQQAALKKENKKFNIISLIFIG 601 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI-------MKMHGAEIGLI 567 F AGL IYW + +I+Q + E L Sbjct: 602 IGVIFSAGLQIYWIIGGIWTILQHIFVHYFQKTKYFKEKVEPKLF 646 >gi|324507050|gb|ADY42997.1| Inner membrane protein OXA1L [Ascaris suum] Length = 379 Score = 90.8 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 82/246 (33%), Gaps = 40/246 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 ++ + M + +N + IM T+ ++L + A + Sbjct: 92 LISWWKPSGYFRMALEAMHNHLDLPWWTTIMCATMCLRLAMVFVPIMSQKLVAKQSMYKK 151 Query: 395 KIDELREKFKQSP-------PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF----FAI 443 ++DE RE+ + Q + K+ +I IL VF FAI Sbjct: 152 ELDEFRERIMDAKKEGNNLLQQQVFLEQRDFLKSKDIRLGRQFLIILANGGVFATQFFAI 211 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 +++ ++ W DL DP P+I +++M I Sbjct: 212 RRMVDVNFPGWATGGALWFTDLTIPDPYY-------------------ALPLISAVTMGI 252 Query: 504 QMKMSPPPADKGQAM-------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ M +L +P+ S F +GL +YW SN IS++ + Sbjct: 253 VARVGIEMGTSTDQMGPGMRLGMLYGLPLFIFVVSSRFASGLCVYWCTSNFISLI--YAM 310 Query: 557 MKMHGA 562 + A Sbjct: 311 LFKMPA 316 >gi|299538281|ref|ZP_07051566.1| membrane protein oxaA precursor [Lysinibacillus fusiformis ZC1] gi|298726483|gb|EFI67073.1| membrane protein oxaA precursor [Lysinibacillus fusiformis ZC1] Length = 253 Score = 90.8 bits (223), Expect = 6e-16, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 99/262 (37%), Gaps = 41/262 (15%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + F I F+ + G++G+AI+ TV ++L+ Sbjct: 16 VLSGCQAVQNKEGFFYSIFVKPMEFLLEFFGN-----DIFSGSYGLAIIAITVLIRLVLM 70 Query: 377 PLAKKQYVSTANMKNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL- 427 P+ K Y MK ++E + Q+ M+ LY+ H INPL Sbjct: 71 PIMLKNYRQQQLMKTKMDAFKPEMEAVQKKMKEAKTKEEQTQYQQEMMALYQKHGINPLN 130 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+Q+P+ +Y I S +++ + + W L + D Sbjct: 131 MGCLPMLIQMPIIMGLYFSILYSADVK-SHEFLWFS-LGSPD------------------ 170 Query: 488 MHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWS 543 + I+ + IQ ++S P K Q + P++ VF S A L +YWS Sbjct: 171 ---IVMTIVAGIVYLIQARVSLWTVPEQQKAQMKMFIYISPIMIVFISMSSMAALPLYWS 227 Query: 544 WSNVISIVQQAVIMKMHGAEIG 565 S + I+Q + K + Sbjct: 228 VSGALLIIQTYIGRKYYSEHPE 249 >gi|125718591|ref|YP_001035724.1| OxaA-like protein precursor [Streptococcus sanguinis SK36] gi|125498508|gb|ABN45174.1| Preprotein translocase subunit YidC, putative [Streptococcus sanguinis SK36] Length = 307 Score = 90.8 bits (223), Expect = 6e-16, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391 W + + N +G+AI++ T+ V+++ + K + + M Sbjct: 35 LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 +P ++E+ K + Q Q+ ++ K + ++ GC P+L+Q+P F A++ Sbjct: 95 FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + + WIKDLA +D I+ + +IQ Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------LALTAIVGILYYIQS 192 Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D+ Q + +M P++ V PA + +YW I I+ + + Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINY 250 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 L ++ F KN Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270 >gi|332358341|gb|EGJ36167.1| SpoIIIJ family protein [Streptococcus sanguinis SK355] Length = 307 Score = 90.8 bits (223), Expect = 6e-16, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 100/260 (38%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391 W + + N +G+AI++ T+ V+++ + K + + M Sbjct: 35 LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 +P ++E+ K + Q Q+ ++ K + ++ GC P+L+Q+P F A++ Sbjct: 95 FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + + WIKDLA +D +I+ + +IQ Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------WALTVIVGILYYIQS 192 Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D+ Q + +M P++ V PA + +YW I I+ + + Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINY 250 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 L ++ F KN Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270 >gi|327490082|gb|EGF21870.1| SpoIIIJ family protein [Streptococcus sanguinis SK1058] Length = 307 Score = 90.8 bits (223), Expect = 6e-16, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391 W + + N +G+AI++ T+ V+++ + K + + M Sbjct: 35 LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 +P ++E+ K + Q Q+ ++ K + ++ GC P+L+Q+P F A++ Sbjct: 95 FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + + WIKDLA +D I+ + +IQ Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------LALTAIVGILYYIQS 192 Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D+ Q + +M P++ V PA + +YW I I+ + + Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINY 250 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 L ++ F KN Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270 >gi|299822979|ref|ZP_07054865.1| ParB/SpoJ family partitioning protein [Listeria grayi DSM 20601] gi|299816508|gb|EFI83746.1| ParB/SpoJ family partitioning protein [Listeria grayi DSM 20601] Length = 274 Score = 90.4 bits (222), Expect = 7e-16, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 84/251 (33%), Gaps = 29/251 (11%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + + ++ + F ++ I ++ + ++ Sbjct: 24 LDPSQNQDGFFNVYLIKPFASVIKFFASFFDGSYGIAIIITTIIIRAIIMPLNLR-TAKA 82 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQ 436 Q A I ++ + +Q+ M +Y+ ++INPL GC P+++Q Sbjct: 83 QMGMQTKMAAAKPEIDDIQARVKRAATKEEQVKIQQEMTLVYQKYDINPLQMGCLPLIIQ 142 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 +P+ A Y I S E+ + W +L D + I+ Sbjct: 143 MPILMAFYYAIRGSQEIA-THTFLWF-NLGHPDM---------------------VLAIL 179 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 L +Q +S Q + M P + +F S P+ L +YW+ + Q Sbjct: 180 AGLVYLLQYFVSMIGNTPEQKKQMRVMGLISPAMILFISFSAPSALALYWAVGGLFLAGQ 239 Query: 553 QAVIMKMHGAE 563 + K++ + Sbjct: 240 TLLTKKLYMNK 250 >gi|327462013|gb|EGF08342.1| SpoIIIJ family protein [Streptococcus sanguinis SK1057] Length = 307 Score = 90.4 bits (222), Expect = 7e-16, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 98/260 (37%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391 W + + N +G+AI++ T+ V+++ + K + + M Sbjct: 35 LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 + ++E+ K + Q Q+ ++ K + ++ GC P+L+Q+P F A++ Sbjct: 95 FKSIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + + WIKDLA +D I+ + +IQ Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------LALTAIVGILYYIQS 192 Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D+ Q + +M P++ V PA + +YW I I+ + + Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINY 250 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 L ++ F KN Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270 >gi|291484826|dbj|BAI85901.1| OxaA-like protein precursor [Bacillus subtilis subsp. natto BEST195] Length = 275 Score = 90.4 bits (222), Expect = 7e-16, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 36/219 (16%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE--------LREKFKQSP 407 G +G++I+L T+ V+++ PL Q+ + I L++ Sbjct: 59 FHGEYGLSIILVTIIVRIVVLPLFVNQFKKQRIFQEKMAVIKPQVDSIQVKLKKTKDPEK 118 Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + LQ M++LY+ +NINPL GC P+L+Q P+ +Y I + E+ + W L Sbjct: 119 QKELQMEMMKLYQENNINPLAMGCLPMLIQSPIMIGLYYAIRSTPEIASHS-FLWFS-LG 176 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------PPPADKGQ-AMI 519 +D + I+ + +I K+S P Q A + Sbjct: 177 QSDILMSLSAG-----------------IMYFVQAYIAQKLSAKYSAVPQNPAAQQSAKL 219 Query: 520 LNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + PV+ + PA L +YW S + VQ V+ Sbjct: 220 MVFIFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNIVLQ 258 >gi|328946838|gb|EGG40975.1| SpoIIIJ family protein [Streptococcus sanguinis SK1087] gi|332362242|gb|EGJ40042.1| SpoIIIJ family protein [Streptococcus sanguinis SK1056] Length = 307 Score = 90.4 bits (222), Expect = 7e-16, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391 W + + N +G+AI++ T+ V+++ + K + + M Sbjct: 35 LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 +P ++E+ K + Q Q+ ++ K + ++ GC P+L+Q+P F A++ Sbjct: 95 FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + + WIKDLA +D I+ + +IQ Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------WALTAIVGILYYIQS 192 Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D+ Q + +M P++ V PA + +YW I I+ + + Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFFSPAAVTLYWVVGGFIQII--QQFIINY 250 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 L ++ F KN Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270 >gi|139439861|ref|ZP_01773226.1| Hypothetical protein COLAER_02260 [Collinsella aerofaciens ATCC 25986] gi|133774789|gb|EBA38609.1| Hypothetical protein COLAER_02260 [Collinsella aerofaciens ATCC 25986] Length = 256 Score = 90.4 bits (222), Expect = 7e-16, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 109/248 (43%), Gaps = 17/248 (6%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +I +F L+ ++G++I++ V ++LL PL K STA M+ +QPK+ Sbjct: 1 MWDWIVNILFELLKLIQTFAVDWGLSIIILVVIIRLLLTPLMLKSTKSTARMQVLQPKML 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA- 456 E++E++ PQ + M + Y + NP+AGC P+L+Q+P+ FA++ ++ + + Sbjct: 61 EIQERYAD-DPQRQAEEMQKFYSENKFNPMAGCLPLLIQMPILFALFTLLRNLPQYFNDG 119 Query: 457 --PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII----MSLSMFIQMKMSPP 510 F+ + DL + F + L + + +I MS + Q S Sbjct: 120 TFSFFNILPDLTTTPSASFADGFMVALPALVCLILFAVLTLIPQLYMSRNQTGQQAQSMR 179 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 +++ WM S P G+++Y+ S+ ++QQ + + + + Sbjct: 180 MMAVVMTVMMLWM-------GWSLPVGVLLYYDVSSAWQVIQQIFVTQKVIDKAKADE-- 230 Query: 571 RSTFSKNY 578 Sbjct: 231 EERLKNAP 238 >gi|282865068|ref|ZP_06274121.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE] gi|282559991|gb|EFB65540.1| 60 kDa inner membrane insertion protein [Streptomyces sp. ACTE] Length = 263 Score = 90.4 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 32/251 (12%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 M F + + L+ F+ + AI+L T V+L PL++ Sbjct: 1 MSAFMSAFASLVGSLADLLQPFFQ-TASTAAAIILFTALVRLAVHPLSRAAARGQKARTK 59 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP+I LREK ++P +QKA+++L+ ++P +GC P LLQ+P FF +Y + S Sbjct: 60 LQPQIAALREKHAKNPE-RMQKALMELHAAEKVSPFSGCLPSLLQMPAFFLLYH-LFSSG 117 Query: 452 EMRHAPFWGWIKD-LAAA------DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF-- 502 + P D L A D LFG G +++G++ ++ +++ F Sbjct: 118 SIGGTPNSLLSHDLLGAPLGERWHDALAHGGLFG-----QAGLVYLGLFAVVAAVATFNY 172 Query: 503 ----IQMKMSPPPAD--------KGQAMILNWMPVVFVFALSS---FPAGLIIYWSWSNV 547 QM +P G + MP++ L S P +Y S Sbjct: 173 GRTKRQMAANPMTPAAGPDGQPVPGMGAMTKVMPLMSFLTLFSVAVVPLAAALYLVTSTT 232 Query: 548 ISIVQQAVIMK 558 + +++A + + Sbjct: 233 WTAIERAYLYR 243 >gi|281491036|ref|YP_003353016.1| OxaA/YidC family membrane protein [Lactococcus lactis subsp. lactis KF147] gi|38503174|sp|Q9CHZ9|OXAA2_LACLA RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|281374794|gb|ADA64314.1| Membrane protein, OxaA/YidC family [Lactococcus lactis subsp. lactis KF147] gi|326406070|gb|ADZ63141.1| OxaA/YidC family membrane protein [Lactococcus lactis subsp. lactis CV56] Length = 320 Score = 90.4 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 95/276 (34%), Gaps = 39/276 (14%) Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--- 375 H + +P + + + + + NL +G I+ T+ ++ L Sbjct: 27 THVVDGVRVPTEAATHGITYNFLVRPMSAFVDLFANNLHMGYGWGIIFVTLIIRFLILPL 86 Query: 376 -----FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--A 428 + Q P + L++ Q+A++ K + IN L Sbjct: 87 GLNQAYKSTYMQEKMAYLAPVFAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSI 146 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+L+Q P F A+Y + + + + F+G +P P Sbjct: 147 GCLPMLIQWPFFIALYNAAAYTTGISSSTFYG-------------------IPLGHPSV- 186 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWM-PVVFVFALSSFPAGLIIYWSW 544 + II + FIQ +S Q + M P + V PAG+ +YW+ Sbjct: 187 ---VLVIISGVLYFIQTWISTLSMTPEQKKSGMAMLIMSPAMIVVFSFMSPAGVALYWAV 243 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 + ++ I+ + + R+ F+KN Sbjct: 244 GGFVIVI--QQIIITFIMKPRMRRRIDEEFTKNPPK 277 >gi|325291449|ref|YP_004267630.1| membrane protein insertase, YidC/Oxa1 family [Syntrophobotulus glycolicus DSM 8271] gi|324966850|gb|ADY57629.1| membrane protein insertase, YidC/Oxa1 family [Syntrophobotulus glycolicus DSM 8271] Length = 230 Score = 90.0 bits (221), Expect = 9e-16, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 24/210 (11%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + +G+AI+L T+ +K++ FPL KQ S M + P I ++++K+ + + + ++ Sbjct: 24 LPYYGVAIILFTIIIKIILFPLTYKQTASMRKMMELTPMITDIQKKYAKDKVKA-NQKVM 82 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 +LY NP GC P+L+Q+P+ +A YK + I A +L Sbjct: 83 ELYAKEKANPYMGCLPLLIQMPILWAFYKALMIFPYGNEASAMFLGFNLTVK-------- 134 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---------SPPPADKGQAMILNWMPVVF 527 Y + I PI LS ++ K P A + Q ++L MP Sbjct: 135 ------YGFTPDYHLILPIAAGLSTYLMSKTTSSSTVSASQPESAKQTQKIMLIVMPFFL 188 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + +S P+GL IY N++S +Q I Sbjct: 189 AYITASVPSGLGIYIITMNIVSAIQTLYIN 218 >gi|332654814|ref|ZP_08420556.1| inner membrane protein OxaA [Ruminococcaceae bacterium D16] gi|332516157|gb|EGJ45765.1| inner membrane protein OxaA [Ruminococcaceae bacterium D16] Length = 401 Score = 90.0 bits (221), Expect = 9e-16, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 108/277 (38%), Gaps = 61/277 (22%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 I KP L+ +FYN ++GIA++L + VKL+ FPL+ K S M + K+ + Sbjct: 1 MGIILKPFAWLLLFFYNFFSSYGIALILFALVVKLILFPLSLKGKKSMIKMNLLSGKMQQ 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL------- 451 L+ K + Q + +LY+ +NP+ GC L + + +Y +I L Sbjct: 61 LQ-KQYGKDRERYQMEVQKLYEREKVNPMGGCLWSFLPLFILIPLYYIIREPLTYLMDVP 119 Query: 452 --------EMRHAPFWGWIKDLAAADPTNI----------------------FTLFGILP 481 E+ G +A A+ N F GI Sbjct: 120 KDAIAKIAEITGIANTGAYPQIAMAEALNKDGMLAQVQAALGDAGNGLFNLDFHFLGINL 179 Query: 482 FYLPGF-----------MHVGIWPIIMSL----SMFIQMKMSPPPADKGQ--------AM 518 +P + + + + P++ + SM I +K + ++ Q Sbjct: 180 ADIPQWNFWANGLSWESIGLFLLPLVSVVMSLLSMQISLKTNQMSRNQAQDEATAKTNRT 239 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 ++ MP++ ++ + PAGL IYW SI Q+ + Sbjct: 240 MMIMMPLMSLWIGFTVPAGLSIYWIAQYFFSIFQELI 276 >gi|15672551|ref|NP_266725.1| OxaA-like protein precursor [Lactococcus lactis subsp. lactis Il1403] gi|12723459|gb|AAK04667.1|AE006291_1 conserved hypothetical protein [Lactococcus lactis subsp. lactis Il1403] Length = 307 Score = 90.0 bits (221), Expect = 9e-16, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 95/276 (34%), Gaps = 39/276 (14%) Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF--- 375 H + +P + + + + + NL +G I+ T+ ++ L Sbjct: 14 THVVDGVRVPTEAATHGITYNFLVRPMSAFVDLFANNLHMGYGWGIIFVTLIIRFLILPL 73 Query: 376 -----FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--A 428 + Q P + L++ Q+A++ K + IN L Sbjct: 74 GLNQAYKSTYMQEKMAYLAPVFAPLQERLKKAQTPEEKMAAQQALMAAQKDNGINMLSSI 133 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+L+Q P F A+Y + + + + F+G +P P Sbjct: 134 GCLPMLIQWPFFIALYNAAAYTTGISSSTFYG-------------------IPLGHPSV- 173 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAM---ILNWM-PVVFVFALSSFPAGLIIYWSW 544 + II + FIQ +S Q + M P + V PAG+ +YW+ Sbjct: 174 ---VLVIISGVLYFIQTWISTLSMTPEQKKSGMAMLIMSPAMIVVFSFMSPAGVALYWAV 230 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 + ++ I+ + + R+ F+KN Sbjct: 231 GGFVIVI--QQIIITFIMKPRMRRRIDEEFTKNPPK 264 >gi|25029500|ref|NP_739554.1| putative inner membrane protein translocase component YidC [Corynebacterium efficiens YS-314] gi|259508318|ref|ZP_05751218.1| membrane protein OxaA [Corynebacterium efficiens YS-314] gi|23494789|dbj|BAC19754.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259164136|gb|EEW48690.1| membrane protein OxaA [Corynebacterium efficiens YS-314] Length = 316 Score = 90.0 bits (221), Expect = 9e-16, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 116/304 (38%), Gaps = 61/304 (20%) Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ +++ + + ++IM T V+++ S Sbjct: 1 MLNFIYWPISAILWFWHQVFSLVLSPDEGITWALSIMFLTFTVRVVLVKPMVNTMRSQRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447 M+++ P++ E+REK+K Q + +L K +NP+AGC P+L+QIPVF ++ V+ Sbjct: 61 MQDMAPRMQEIREKYKN-DQQKMMAESRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLR 119 Query: 448 -------------SISLEMRHAPFW--------------GWIKDLAAA--DPTNIFTLFG 478 E R+ P + + L+A P F F Sbjct: 120 SFNRTGEGIGQLGMSIEENRNTPNYIFDVEHVQSFLAADLFGAPLSAYITMPEEAFAAFD 179 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--------------------- 517 L + +I+ ++ + ++S ++ + Sbjct: 180 FDVSRLNIALVAAPMILIIVVATHMNARLSVNRQEERKRSGKQVAPANDQMAMQMQMMNK 239 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 M+L +MP+ +F + GL+IY +NV + QQ I AE D L+ ++ Sbjct: 240 MMLWFMPLTILFTGFIWTIGLLIYMMSNNVWTFFQQRYIFAKMDAEEAAEDELKKAAKRS 299 Query: 578 YNSQ 581 + Sbjct: 300 TAPK 303 >gi|169829751|ref|YP_001699909.1| membrane protein oxaA [Lysinibacillus sphaericus C3-41] gi|168994239|gb|ACA41779.1| Membrane protein oxaA precursor [Lysinibacillus sphaericus C3-41] Length = 252 Score = 90.0 bits (221), Expect = 9e-16, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 38/244 (15%) Query: 337 GWFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 ++ KPM L+ +F N G++G+AI+ TV ++L+ P+ K Y MK Sbjct: 29 IFYSIFVKPMEFLLEFFGNDIFAGSYGLAIIAITVLIRLVLMPIMLKNYRQQQLMKTKMD 88 Query: 395 KIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYK 445 ++E + Q+ M+ LY+ H INPL GC P+L+Q+P+ +Y Sbjct: 89 AFKPEMEAVQKKMKEAKTKEEQTQYQQEMMALYQKHGINPLNMGCLPMLIQMPIIMGLYF 148 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S +++ + + W L + D + I+ + +Q Sbjct: 149 SILYSTDVK-SHEFLWFS-LGSPD---------------------IVMTIVAGVVYLVQA 185 Query: 506 KMSP---PPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 ++S P K Q + P++ VF S A L +YWS S + I+Q + K + Sbjct: 186 RVSLWTVPEQQKAQMKMFIYISPIMIVFISMSSMAALPLYWSVSGALLILQTYIGRKYYS 245 Query: 562 AEIG 565 Sbjct: 246 QHPE 249 >gi|116618818|ref|YP_819189.1| preprotein translocase subunit YidC [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097665|gb|ABJ62816.1| Preprotein translocase subunit YidC [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 307 Score = 90.0 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 95/268 (35%), Gaps = 43/268 (16%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNL---VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + +I +P+ LM+ + V G AI++ T +L+ P Q V+T Sbjct: 23 GYNQHSRMYRWIGQPLAELMTNIAHFIGGVNGIGWAIIVITAIFRLILLPFFLNQQVNTT 82 Query: 388 NMKNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQI 437 + K+ R+ Q AM+ LY+ ++++ + G + +Q+ Sbjct: 83 VNQIKMQKLKPEIDKLQTLSRKAATTEEQQKASMAMMSLYRENDVSVIGGISFLTMAMQL 142 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 P+F +Y I + ++ A F G+ DL ++ I+ Sbjct: 143 PIFSGLYSAILHAPALQGASFLGF--DLGKP---------------------QLVFAIVA 179 Query: 498 SLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + IQ + + Q ++ P++ + +Y+ + +++Q Sbjct: 180 GIIYLIQAWLMMQHMPEEQRKTSAAMMFVSPIMIFVFAMIASGAIGLYFVIGGIFALIQT 239 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + H GL R+ + F + Sbjct: 240 LI---QHYQRPGLEKRVTAEFKIQKTAD 264 >gi|171693303|ref|XP_001911576.1| hypothetical protein [Podospora anserina S mat+] gi|170946600|emb|CAP73402.1| unnamed protein product [Podospora anserina S mat+] Length = 452 Score = 90.0 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 83/266 (31%), Gaps = 46/266 (17%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTA 387 F + + + M ++ + Y G A I L ++ ++ + Sbjct: 117 GFLKNLGLDYGFGPTALMEWILEHTYIYTGLPWWASIGLVSLAIRAVLVKPMFTAAEMAQ 176 Query: 388 NMKNIQ---PKIDELREKFKQSPPQVLQKAMI--------QLYKTHNINPLAGCWPILLQ 436 +++++ +E + + + + L P L+Q Sbjct: 177 KLQDLKRDPKYEQLEKEVMSAFQGGQADQYAMLDKRNKMKAMRRAVGYKMLPASVPALVQ 236 Query: 437 IPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IPV F ++++I ++ W DL +DP I Sbjct: 237 IPVGFGMFRLIRGMADLPVPSMETGGALWFNDLTVSDPLF-------------------I 277 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-----PVVFVFALSSFPAGLIIYWSWSNV 547 PI+ + M M++ P Q + M P+ PAGL +Y++ S Sbjct: 278 LPIVGAGLMIASMRVPLPYMASSQQGTMKIMTMVAAPITLGV-SIFLPAGLQLYFAISTF 336 Query: 548 ISIVQQAVIM-----KMHGAEIGLID 568 + QQ + KM G + Sbjct: 337 LQFGQQWLTYQNWFRKMIGLRPVVFG 362 >gi|307709736|ref|ZP_07646187.1| membrane protein oxaA 1 [Streptococcus mitis SK564] gi|307619438|gb|EFN98563.1| membrane protein oxaA 1 [Streptococcus mitis SK564] Length = 308 Score = 89.7 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 73/212 (34%), Gaps = 30/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 ILLQ+P F AIY + + A + G L + + G+L + G+ Sbjct: 143 ILLQMPFFSAIYFAAQYTEGVAQASYLG--IPLGSP-SMILAACAGVLYYLQSLLSLHGV 199 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 D+ Q + PV+ PA + +YW + Sbjct: 200 -------------------EDETQRDQIKKMAYVSPVMIAGFSLISPASVTLYWVVGGFM 240 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 I+QQ ++ + L ++R +KN Sbjct: 241 MILQQFIVN--YIVRPKLRKKVREELAKNPPK 270 >gi|213581272|ref|ZP_03363098.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 215 Score = 89.7 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 64/211 (30%), Gaps = 18/211 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSPRGRIMRH 205 Y + +V N + S G++ + Sbjct: 169 RGDYAVNVNYSVQNTGEKPLEVSTFGQLKQS 199 >gi|212715145|ref|ZP_03323273.1| hypothetical protein BIFCAT_00031 [Bifidobacterium catenulatum DSM 16992] gi|212661826|gb|EEB22401.1| hypothetical protein BIFCAT_00031 [Bifidobacterium catenulatum DSM 16992] Length = 344 Score = 89.7 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 106/270 (39%), Gaps = 31/270 (11%) Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK 372 + + + F++M + ++ ++I+ + V+ Sbjct: 3 QNQFLLDSGFWGWLYKLLYPVEWLMTQIMAVFHKFLVMLGMNEIGFSWVMSIVFLVLVVQ 62 Query: 373 LLFFPLAKKQYVSTANMK--------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 FPL K M+ +Q ++ + K + + +Q+ M++LY+ ++ Sbjct: 63 ACVFPLFYKSMKGMRKMQAQMAVLQPKMQRIQNKYKGKNDPASKEAMQREMMKLYQDNDA 122 Query: 425 NPLAGC---WPILLQIPVFFAIYKVISISLEM-RHA---PFWGWIKDLAAADPTNIFTLF 477 NP+ GC P+ +Q PVF ++ +S + R D+A A T+F Sbjct: 123 NPMGGCTSMLPMFVQGPVFMCMFYTLSAIPYIARGKFRDGQGLGAFDIATAKQFTSTTVF 182 Query: 478 GILPFY------LPGFMHVGIWPIIMSLSMFIQM----KMSPPP-----ADKGQAMILNW 522 G+ + G + + I+ +M ++ K + + ++ W Sbjct: 183 GVNVADNFTTAAVHGKVVIAIFVALMCFCLWFMQYNSMKRNMAQSAANKQTEMMQKMMLW 242 Query: 523 M-PVVFVFALSSFPAGLIIYWSWSNVISIV 551 M P++++F+ + P +++YW +N+ +++ Sbjct: 243 MFPIMYIFSGIAMPFAVLVYWLTNNICNLL 272 >gi|255537783|ref|XP_002509958.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis] gi|223549857|gb|EEF51345.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis] Length = 421 Score = 89.7 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 88/231 (38%), Gaps = 37/231 (16%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 F +A ++ + N+ +I+LTT+ ++ + PL Q +T+ + ++P++ Sbjct: 134 DCFAPVAVLQHVIDAVHNLTGFNWWASIVLTTLIIRTMMVPLMINQLKATSKLTLMRPRL 193 Query: 397 DELREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +E++++ + K M L+K + +P I +Q PVF + I Sbjct: 194 EEIKQQMDNTAMDPAAIAEGNKRMKMLFKEYGASPFTPMKGIFVQGPVFVCFFLAIRNMA 253 Query: 452 EMRHAPFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 E P + W DL+ D IF P++ +L+ +I ++ Sbjct: 254 E--KVPSFKNGGAFWFVDLSTPDSLYIF-------------------PVLTALTFWITVE 292 Query: 507 MSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ P I + V FP + YW +N+ S Sbjct: 293 LNMQEGLEGNPVAGTMKNISRVFAALTVPLTMGFPKAIFCYWVTTNLFSFA 343 >gi|307705543|ref|ZP_07642395.1| membrane protein oxaA 1 [Streptococcus mitis SK597] gi|307620820|gb|EFN99904.1| membrane protein oxaA 1 [Streptococcus mitis SK597] Length = 308 Score = 89.7 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 73/212 (34%), Gaps = 30/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 ILLQ+P F AIY + + A + G L + + G+L + G+ Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG--IPLGSP-SMILAACAGVLYYLQSLLSLHGV 199 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 D+ Q + PV+ PA + +YW + Sbjct: 200 -------------------EDETQRDQIKKMAYVSPVMIAGFSLISPASVTLYWVVGGFM 240 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 I+QQ ++ + L ++R +KN Sbjct: 241 MILQQFIVN--YIVRPKLRKKVREELAKNPPK 270 >gi|255579269|ref|XP_002530480.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis] gi|223529977|gb|EEF31903.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis] Length = 423 Score = 89.7 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 91/231 (39%), Gaps = 37/231 (16%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 F +A ++ + N+ +I+LTT+ ++ L PL Q +T+ + ++P++ Sbjct: 136 DCFPPVAVLHHIIDAVHNLTGFNWWASIVLTTLVIRTLMVPLMINQLKATSKLTLMRPRL 195 Query: 397 DELREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +E++++ + + K M L+K + ++P + +Q PVF + I Sbjct: 196 EEIKQQMQDTGMDPATIAEGNKQMKMLFKEYGVSPFTPMKGLFIQGPVFVCFFLAIRNMA 255 Query: 452 EMRHAPFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 E + P + W DL+ D IF P++ +L+ +I ++ Sbjct: 256 E--NVPSFKNGGAFWFVDLSTPDSLYIF-------------------PVLTALTFWITIE 294 Query: 507 MSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ P I + V FP + YW +N+ S Sbjct: 295 LNMQEGLEGNPVAGTMKNISRVFAALTVPLTMGFPKAIFCYWVTTNLFSFA 345 >gi|307198512|gb|EFN79417.1| Mitochondrial inner membrane protein OXA1L [Harpegnathos saltator] Length = 275 Score = 89.7 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 86/216 (39%), Gaps = 34/216 (15%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF-------KQSPP 408 + I++ TV ++ L FPL + A N P I E+++K Sbjct: 5 YDIPWWTTIVIGTVILRTLIFPLVVITQKNMAKFTNHMPVIQEIQQKMTKARHIGDHFES 64 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMRHAPFWGWIKD 464 +++ K HN+ L+Q P+F A+ K+ ++ +E + W++D Sbjct: 65 ARYASELMEYMKKHNVKIGRNFLIPLVQAPIFISCFLALRKMANLPVESLKQGGFWWMQD 124 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD----KGQAMIL 520 L DP I PI+ ++M+I +++ + Sbjct: 125 LTIHDPYY-------------------IMPIVTCVTMYITIEIGADGTHLKSLGVMRYVF 165 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +P + + +FP ++ YW+ +N +S++Q +++ Sbjct: 166 RIVPFAILPFILNFPGAILTYWASTNFMSLIQTSLL 201 >gi|126651503|ref|ZP_01723707.1| hypothetical protein BB14905_07464 [Bacillus sp. B14905] gi|126591756|gb|EAZ85852.1| hypothetical protein BB14905_07464 [Bacillus sp. B14905] Length = 252 Score = 89.7 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 99/262 (37%), Gaps = 41/262 (15%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 + + F I F+ + G++G+AI+ TV ++L+ Sbjct: 16 VLSGCQAVQNKEGFFYSIFVKPMEFLLEFFGN-----NIFAGSYGLAIIAITVLIRLVLM 70 Query: 377 PLAKKQYVSTANMKNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPL- 427 P+ K Y MK ++E + Q+ M+ LY+ H INPL Sbjct: 71 PIMLKNYRQQQLMKTKMDAFKPEMEAVQKKMKEAKTKEEQTQYQQEMMALYQKHGINPLN 130 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 GC P+L+Q+P+ +Y I S +++ + + W L + D Sbjct: 131 MGCLPMLIQMPIIMGLYFSILYSTDVK-SHEFLWFS-LGSPD------------------ 170 Query: 488 MHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWS 543 + I+ + +Q ++S P K Q + P++ VF S A L +YWS Sbjct: 171 ---IVMTIVAGIVYLVQARVSLWTVPEQQKAQMKMFIYISPIMIVFISMSSMAALPLYWS 227 Query: 544 WSNVISIVQQAVIMKMHGAEIG 565 S + I+Q + K + Sbjct: 228 VSGALLILQTYIGRKYYSQHPE 249 >gi|255029969|ref|ZP_05301920.1| OxaA-like protein precursor [Listeria monocytogenes LO28] Length = 249 Score = 89.3 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 52/233 (22%), Positives = 93/233 (39%), Gaps = 36/233 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393 Y I +M + GN+GIAI++TT+ ++ L PL + + M++ Sbjct: 36 TYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95 Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449 L+ + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I Sbjct: 96 EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S E+ + + W +L + D + II L Q +S Sbjct: 156 SSEIA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192 Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 Q + + P++ +F + P+ L +YW+ + Q + K Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKK 245 >gi|326693242|ref|ZP_08230247.1| integral membrane protein [Leuconostoc argentinum KCTC 3773] Length = 304 Score = 89.3 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 101/264 (38%), Gaps = 35/264 (13%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNL---VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + +I +P+ +M+ ++ V G AI++ T ++L+ P Q V+T Sbjct: 23 GYSQHSRMYRWIGQPLADIMANIAHVIGGVNGIGWAIIIITAILRLILLPFFLNQQVNTT 82 Query: 388 NMKNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQI 437 + K+ R+ + Q AM+ LY+ ++++ + G + +Q+ Sbjct: 83 INQIKMQKLKPEIDKLQAISRKAGTSAEQQQASMAMMSLYRENDVSVIGGISFLTLAMQL 142 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 PVF +Y I + ++ A F+G L+ P IF + + + + ++ V Sbjct: 143 PVFSGLYAAILHAPALKGATFFG----LSLGQPQLIFAIAAGVVYLVQAWIAVL------ 192 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P K A ++ P++ + +Y+ + +++Q ++ Sbjct: 193 ---------RMPEEQKKASATMMLISPIMIFVFAMIASGAIGLYFIVGGLFALLQSLIL- 242 Query: 558 KMHGAEIGLIDRLRSTFSKNYNSQ 581 H GL R+ F + Sbjct: 243 --HFQRPGLEKRVAREFKIKKTAD 264 >gi|329314775|gb|AEB89188.1| Membrane protein oxaA [Staphylococcus aureus subsp. aureus T0131] Length = 284 Score = 89.3 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 101/252 (40%), Gaps = 35/252 (13%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 ++ PM ++ + N L N+G+AI++ + ++++ P Y ++ M+ Sbjct: 32 FYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKV 91 Query: 396 IDELREKFKQ--------SPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIY 444 EK ++ + ++Q+YK +++NP + GC P+L+Q+P+ +Y Sbjct: 92 AKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLY 151 Query: 445 KVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ + + P + W DL D I ++ + + Sbjct: 152 FVLKDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAGVLYFIQAY 193 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMH 560 + K P + M++ P++ ++ S + L +YWS S +VQ I Sbjct: 194 VSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEK 253 Query: 561 GAEIGLIDRLRS 572 A+ + + + Sbjct: 254 VAKKEVQPFIEA 265 >gi|225386358|ref|ZP_03756122.1| hypothetical protein CLOSTASPAR_00102 [Clostridium asparagiforme DSM 15981] gi|225047540|gb|EEG57786.1| hypothetical protein CLOSTASPAR_00102 [Clostridium asparagiforme DSM 15981] Length = 412 Score = 89.3 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 13/127 (10%) Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIW--PIIMSLSMFIQMKMSPPPADKGQ------AM 518 A P + F F + P++ S + K+ Q A Sbjct: 209 AYTPMQVIGNFFSHVDGTTVFALIAALAIPLLAGASQWYSSKLMMATTQSPQGDENPGAN 268 Query: 519 ILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 ++ MP++ VF +F G+ +YW +V +I+QQ I + ++ + D ++ Sbjct: 269 MMKSMNVMMPLMSVFFCFTFATGIGLYWVAQSVFTIIQQVGIN-SYLKKVDIDDLVQKNV 327 Query: 575 SKNYNSQ 581 K + Sbjct: 328 EKTNKKR 334 Score = 52.3 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 5/105 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + N G+ I+L T+ KLL PL KQ S+ M +QP++ +++K+K M+ Sbjct: 13 IVNIGLCIILFTLVTKLLMIPLTIKQQKSSKLMAVMQPELTAIQKKYKGKEGDQKAMMMM 72 Query: 417 -----QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +Y+ + + GC P+L+Q+P+ FA+Y+VI H+ Sbjct: 73 QTETKAVYEKYGTSMTGGCLPMLIQLPIIFALYRVIYNIPAYVHS 117 >gi|325690943|gb|EGD32943.1| SpoIIIJ family protein [Streptococcus sanguinis SK115] Length = 307 Score = 89.3 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391 W + + N +G+AI++ T+ V+++ + K + + M Sbjct: 35 LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 +P ++E+ K + Q Q+ ++ K + ++ GC P+L+Q+P F A++ Sbjct: 95 FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + + WIKDLA +D I+ + +IQ Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------LALTAIVGILYYIQS 192 Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D+ Q + +M P++ V PA + +YW I I+ + + Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINY 250 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 L ++ F KN Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270 >gi|225020858|ref|ZP_03710050.1| hypothetical protein CORMATOL_00866 [Corynebacterium matruchotii ATCC 33806] gi|305681586|ref|ZP_07404392.1| membrane protein insertase, YidC/Oxa1 family [Corynebacterium matruchotii ATCC 14266] gi|224946340|gb|EEG27549.1| hypothetical protein CORMATOL_00866 [Corynebacterium matruchotii ATCC 33806] gi|305658746|gb|EFM48247.1| membrane protein insertase, YidC/Oxa1 family [Corynebacterium matruchotii ATCC 14266] Length = 319 Score = 89.3 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 108/301 (35%), Gaps = 58/301 (19%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + Y+ + L + V N + +AI+L T V++L Q S M+ Sbjct: 4 FVYWPISVILWLWHKALSFVLNPDSGLTWVLAIVLLTFTVRILLVRPTINQMRSMRKMQE 63 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--- 448 IQP++ E+R K+K Q + + +L K NPLAGC PIL+Q+PVF +Y V+ Sbjct: 64 IQPQMQEIRNKYKN-DQQKMMQETQKLQKEMGFNPLAGCLPILVQMPVFLGLYHVLRSFN 122 Query: 449 -----------ISLEMRHAPFWGWIKD------------------LAAADPTNIFTLFGI 479 + R P + + + ++ + Sbjct: 123 RTGTGAGQLGLTPEQNRMTPNYFFSAEDVQSFLDARLFKVPLSAYISMPESMYQAFPGDF 182 Query: 480 LPFYLPGFMHVGIWPIIMSLSM------------FIQMKMSPPPADKGQA-------MIL 520 + + I++++ M K P D+ Q M+L Sbjct: 183 TKTNIIMLAAPLVVIIVVAIHMNARLSVDRQKARIASGKQKPAANDQMQMQADMMNKMML 242 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 ++P + + + GL+ Y +NV + QQ + K+ E + + + Sbjct: 243 WFLPGTILLTCTFWHIGLLFYMVSNNVWTFFQQRWVFKLMDTEEEAELQAKKDAKRASAP 302 Query: 581 Q 581 + Sbjct: 303 K 303 >gi|324993653|gb|EGC25572.1| SpoIIIJ family protein [Streptococcus sanguinis SK405] gi|324995035|gb|EGC26948.1| SpoIIIJ family protein [Streptococcus sanguinis SK678] gi|327462922|gb|EGF09243.1| SpoIIIJ family protein [Streptococcus sanguinis SK1] gi|327474526|gb|EGF19931.1| SpoIIIJ family protein [Streptococcus sanguinis SK408] Length = 307 Score = 89.3 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391 W + + N +G+AI++ T+ V+++ + K + + M Sbjct: 35 LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 +P ++E+ K + Q Q+ ++ K + ++ GC P+L+Q+P F A++ Sbjct: 95 FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + + WIKDLA +D I+ + +IQ Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------LALTAIVGILYYIQS 192 Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D+ Q + +M P++ V PA + +YW I I+ + + Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINY 250 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 L ++ F KN Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270 >gi|282881780|ref|ZP_06290438.1| membrane protein OxaA [Peptoniphilus lacrimalis 315-B] gi|281298390|gb|EFA90828.1| membrane protein OxaA [Peptoniphilus lacrimalis 315-B] Length = 244 Score = 89.3 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 20/244 (8%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + ++ + ++ + + ++I++TT+ +K+L PL Q + M +QP+I Sbjct: 11 IFIRYVYNLIAQIIPNEPTNISYYALSIIITTLILKILVLPLTISQMKNQKKMAELQPEI 70 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++++K+K PQ L QLYK+ N N L+GC P+++Q+ V Y+ Sbjct: 71 AKIQKKYKN-DPQTLAMKQRQLYKSANYNVLSGCLPMIVQLLVLVGFYRCFYKP-----Q 124 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPAD 513 + + A L I P + +++ F + SP Sbjct: 125 TYIF-----SQAGFYQAMNKNFFYISNLGVADKTMILPALAAITTFFTSYLATKSPAAGA 179 Query: 514 ------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 ++ MP++ F + A L+IYW+ SN+ +IVQQ V+ + Sbjct: 180 GQDQAKSMMNSMMVAMPIMIFFMGRTLQAELVIYWTVSNIFAIVQQLVVNNFVKKSVEES 239 Query: 568 DRLR 571 + LR Sbjct: 240 NELR 243 >gi|313678196|ref|YP_004055936.1| membrane protein [Mycoplasma bovis PG45] gi|312950783|gb|ADR25378.1| putative membrane protein [Mycoplasma bovis PG45] Length = 721 Score = 88.9 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 68/496 (13%), Positives = 156/496 (31%), Gaps = 57/496 (11%) Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 + ++P++TK + N+ N Sbjct: 222 DKDKNIFKINPNSTKLINEGKFISNLDVNSNNDKKKKNDKNAFIYDKELSYQTFANRNNF 281 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 F R I ++ S + + + + G + F+ Sbjct: 282 TGFAKFRRDIF----ETLATNTFYSDKSKYYKKALSQVEKTLKNENYSADFNGFNKYFVD 337 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + +K E +++ ++ ++++ + + A I + S + LS+ + Sbjct: 338 KIKNKKSNELEFAPNVFYALKYYNKALNKYANELNFSALNQISPVKNSVIEEINSLSNDY 397 Query: 283 ARYQAKFSANEITILP-----GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWG 337 + K S + + + ++ L A A + + IP Sbjct: 398 NKINDKNSKEATDLRKKITTLNEQLRNSSRLLAPAPYSSMTINLNDAVKIPYAGDEPQRV 457 Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF-----------------VKLLFFPLAK 380 + + + A + T++ ++ + Sbjct: 458 IYNWADAWKLGPFYGLLVFPTAWLSAHLSTSLSHLGGWGTIIVILVLTIILRSAMLAITF 517 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQ-----KAMIQLYKTHNINPLAGCWPILL 435 KQ V+ + + ++ K ++ K+ + + + +LYK H INP +L+ Sbjct: 518 KQTVNQSKQEELKSKKAKIDAKYAEFKNNKQMKARQQQEVAELYKKHGINPFDAFVTMLI 577 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 +P+F +++VI E + + G + T+ LF + G + + I Sbjct: 578 SLPIFIMMWRVIQSLPEFKSTVWLG-----ISFAETSWRRLFFSGEWQYLGVLL--VVAI 630 Query: 496 IMSLSMFIQMKMSPPP---------------ADKGQAMILNWMPVVFVFALSSFPAGLII 540 + ++ F+ ++ A++ Q M +VF F F AGL + Sbjct: 631 VQGVAQFLPQILNRKKFKERTSLEEEKALKKANRTQR----IMTIVFFFVTLIFSAGLQV 686 Query: 541 YWSWSNVISIVQQAVI 556 YW S + +I+Q I Sbjct: 687 YWIISGLWTIIQTLSI 702 >gi|260579557|ref|ZP_05847428.1| preprotein translocase YidC subunit [Corynebacterium jeikeium ATCC 43734] gi|258602328|gb|EEW15634.1| preprotein translocase YidC subunit [Corynebacterium jeikeium ATCC 43734] Length = 324 Score = 88.9 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 63/309 (20%), Positives = 117/309 (37%), Gaps = 67/309 (21%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ L + +AIM +++L Q S+ M Sbjct: 1 MDFIYYPVSGVLWFWHKLFSYVLSPDSGITWALAIMFLVFTIRILLVKPMANQLRSSRKM 60 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-- 447 + +QPK+ EL+ K+K Q L M +L K +NPLA C P+L+Q+P+F ++ V+ Sbjct: 61 QEMQPKMQELQRKYKN-DRQTLAVEMRKLQKEMGVNPLASCLPMLVQMPIFLGLFHVLRS 119 Query: 448 ------------SISLEMRHAPFWGWI--------------KDLA---AADP--TNIFTL 476 E R+ P + + L+ + DP F+ Sbjct: 120 FNRTGTGVGQLGMTVEETRNTPNYFFGVHEVQSFLDARIFGTPLSGFISMDPNNYRAFSA 179 Query: 477 FGILPFYLPGFMHVGI-WPIIMSLSMFIQMKMSPPPA------DKGQAM----------- 518 G + F + V + ++ S+ M +MS A + +A Sbjct: 180 DGHVDFTRTNIILVVVPMMLVASVLMHFSARMSMDRAAKRRAENPIKANDPKAQQTQMQM 239 Query: 519 ------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 +L MPV+++ ++ GL +Y + S +QQ + K AE + Sbjct: 240 DMMQKMMLWVMPVLYLMGGFAWQVGLALYMVTNMTWSYLQQFFLYKKMDAEEEAQKEAVA 299 Query: 573 TFSKNYNSQ 581 + + Sbjct: 300 AAKRTSAPK 308 >gi|254993106|ref|ZP_05275296.1| OxaA-like protein precursor [Listeria monocytogenes FSL J2-064] Length = 249 Score = 88.9 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 36/230 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393 Y I +M + GN+GIAI++TT+ ++ L PL + + M++ Sbjct: 36 TYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95 Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449 L+ + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I Sbjct: 96 EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 S E+ + + W +L + D + II L Q +S Sbjct: 156 SSEIA-SHTFLWF-NLGSPDM---------------------VLAIIAGLVYLAQYFVSM 192 Query: 510 PPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 Q + + P++ +F + P+ L +YW+ + Q + Sbjct: 193 IGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLL 242 >gi|315640647|ref|ZP_07895752.1| membrane protein [Enterococcus italicus DSM 15952] gi|315483586|gb|EFU74077.1| membrane protein [Enterococcus italicus DSM 15952] Length = 313 Score = 88.9 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 86/256 (33%), Gaps = 32/256 (12%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + F+ F + I + + + + + A Q +K Sbjct: 44 KTLVVPLGDFLTYLATNFNWGFGWAIIIVTIVVRIILLPMGISQSKKAMVQSEKMQYLKP 103 Query: 392 IQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVIS 448 ++ Q+ + M ++YK +N+N L GC P+L+Q+P+F A+Y +S Sbjct: 104 QMDIAQANLKQATTREEQLKAQTEMQKIYKENNVNMLGGIGCLPLLIQMPIFSALYFTVS 163 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + + A F G + I+ + LS Q +S Sbjct: 164 YTQGINTATFMG-----------------------VNLGKANLIFVALAGLSYVGQSYLS 200 Query: 509 PPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + Q + M P++ VF PAG+ +YW + S Q + + + Sbjct: 201 LIGIPEEQKKTMRSMMIVSPLMIVFMSLKAPAGVTLYWVIGGIFSCFQTFITNVLM--KP 258 Query: 565 GLIDRLRSTFSKNYNS 580 + ++ N Sbjct: 259 RIKKQIEEEMRLNPPK 274 >gi|311068990|ref|YP_003973913.1| OxaA-like protein precursor [Bacillus atrophaeus 1942] gi|310869507|gb|ADP32982.1| OxaA-like protein precursor [Bacillus atrophaeus 1942] Length = 277 Score = 88.9 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 51/233 (21%), Positives = 89/233 (38%), Gaps = 47/233 (20%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE--------LREKFKQSP 407 G +G++IML T+ V+++ PL Q+ + I +++ Sbjct: 59 FNGEYGLSIMLVTIIVRVIVLPLFVHQFKKQRVFQEKMAVIKPQIDSIQAKIKKNKDPEK 118 Query: 408 PQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + LQ M++LY+ +N+NPL GC P+L+Q P+ Y I + E+ + W L Sbjct: 119 QKELQMEMMKLYQENNLNPLAMGCLPMLVQFPILIGFYYAIRSTPEIASHS-FLWFS-LG 176 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ----MKMS------PPPADKGQ 516 +D + + FIQ K+S P Q Sbjct: 177 QSD---------------------ILVSLCAGAMYFIQAYVAQKLSAKYSAVPQNPAAQQ 215 Query: 517 -AMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI---MKMHGAEI 564 A I+ + PV+ + PA L +YW S + VQ ++ + + Sbjct: 216 SAKIMVFFFPVMMTIFSLNVPAALPLYWFTSGLFLTVQNVILQQTYHKNKNKE 268 >gi|325695044|gb|EGD36947.1| SpoIIIJ family protein [Streptococcus sanguinis SK150] Length = 307 Score = 88.9 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391 W + + N +G+AI++ T+ V+++ + K + + M Sbjct: 35 LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 +P ++E+ K + Q Q+ ++ K + ++ GC P+L+Q+P F A++ Sbjct: 95 FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + + WIKDLA +D I+ + +IQ Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------WALTAIVGILYYIQS 192 Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D+ Q + +M P++ V PA + +YW I I+ + + Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINY 250 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 L ++ F KN Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270 >gi|295428677|ref|ZP_06821303.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus EMRSA16] gi|295127347|gb|EFG56987.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus EMRSA16] Length = 290 Score = 88.9 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 101/252 (40%), Gaps = 35/252 (13%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 ++ PM ++ + N L N+G+AI++ + ++++ P Y ++ M+ Sbjct: 32 FYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKV 91 Query: 396 IDELREKFKQ--------SPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIY 444 EK ++ + ++Q+YK +++NP + GC P+L+Q+P+ +Y Sbjct: 92 AKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLY 151 Query: 445 KVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ + + P + W DL D I ++ + + Sbjct: 152 FVLKDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAGVLYFIQAY 193 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMH 560 + K P + M++ P++ ++ S + L +YWS S +VQ I Sbjct: 194 VSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEK 253 Query: 561 GAEIGLIDRLRS 572 A+ L + + Sbjct: 254 VAKKELQPFIEA 265 >gi|68537196|ref|YP_251901.1| putative inner membrane protein translocase component YidC [Corynebacterium jeikeium K411] gi|68264795|emb|CAI38283.1| preprotein translocase YidC subunit [Corynebacterium jeikeium K411] Length = 324 Score = 88.9 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 63/309 (20%), Positives = 117/309 (37%), Gaps = 67/309 (21%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 FI P+ ++ +++ L + +AIM +++L Q S+ M Sbjct: 1 MDFIYYPVSGVLWFWHKLFSYVLSPDSGITWALAIMFLVFTIRILLVKPMANQLRSSRKM 60 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI-- 447 + +QPK+ EL+ K+K Q L M +L K +NPLA C P+L+Q+P+F ++ V+ Sbjct: 61 QEMQPKMQELQRKYKN-DRQTLAVEMRKLQKEMGVNPLASCLPMLVQMPIFLGLFHVLRS 119 Query: 448 ------------SISLEMRHAPFWGWI--------------KDLA---AADP--TNIFTL 476 E R+ P + + L+ + DP F+ Sbjct: 120 FNRTGTGVGQLGMTVEETRNTPNYFFGVHEVQSFLDARIFGTPLSGFISMDPNNYRAFSA 179 Query: 477 FGILPFYLPGFMHVGI-WPIIMSLSMFIQMKMSPPPA------DKGQAM----------- 518 G + F + V + ++ S+ M +MS A + +A Sbjct: 180 DGHVDFTRTNIILVVVPMMLVASVLMHFSARMSMDRAAKRRAENPIKANDPKAQQTQMQM 239 Query: 519 ------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 +L MPV+++ ++ GL +Y + S +QQ + K AE + Sbjct: 240 DMMQKMMLWVMPVLYLMGGFAWQVGLALYMVTNMTWSYLQQFFLYKKMDAEDEAQKEAVA 299 Query: 573 TFSKNYNSQ 581 + + Sbjct: 300 AAKRTSAPK 308 >gi|326429399|gb|EGD74969.1| hypothetical protein PTSG_07193 [Salpingoeca sp. ATCC 50818] Length = 370 Score = 88.5 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 85/214 (39%), Gaps = 34/214 (15%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------V 410 ++ I+L+T+ ++ L P+ + M N++P++ ++ KQ Q Sbjct: 72 MSWFGGIVLSTIAIRTLMLPITVAMMRNNVTMMNLRPEMQLHADRIKQCAAQGDEEGKIA 131 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF----WGWIKDLA 466 + + +L K + ++PL QIPVF + + + A + + DL Sbjct: 132 ASQRLQELMKKNGVSPLKS-LYGFAQIPVFLSFFFALRSITGGEVASIKTGGYSFFTDLT 190 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMILNWM 523 AADPT + P++ + +M + ++S + + Sbjct: 191 AADPTY-------------------VLPVVTATTMLLSFELSSRMGTAMSPTMKKVFRGL 231 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +V ++ P G+ YW SN+ ++ Q AV+ Sbjct: 232 ALVTGAVTATLPMGIHAYWITSNIFTLGQVAVLN 265 >gi|319440491|ref|ZP_07989647.1| putative inner membrane protein translocase component YidC [Corynebacterium variabile DSM 44702] Length = 424 Score = 88.5 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 104/296 (35%), Gaps = 75/296 (25%) Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ +++ + ++I+ V ++LL KQ S Sbjct: 1 MLNFIYYPISWVLWFWHKAWGLILDPDSGITWALSIIFLVVTLRLLLLRPMIKQLRSGRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP++ E++ K+ + Q M +L K +NPLA C P+L+QIP+F ++ V+ Sbjct: 61 MQEMQPRMQEIKRKYAKDQQQQAL-EMRKLQKEMGVNPLASCLPMLVQIPIFIGLFHVLR 119 Query: 449 I-------------SLE----------------------MRHAPFWGWIKDLAAADPTNI 473 S+E + AP +I D Sbjct: 120 SFNRTGTGTGQLGMSIEETRNTANYGFGIDEVQSFLDARLFGAPLSSYISMPT--DSFGA 177 Query: 474 FTLFGILPFYLPGFMHVGI-WPIIMSLSMFI---------------------------QM 505 FT G + F V I ++ ++ M Q Sbjct: 178 FTDDGSVDFTRANIAFVVIPMMLVAAVIMHFNAKHSLVRQARRKAEQAKSKKKGATTPQQ 237 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 M Q +++ MPV+ + + GL +Y + + VQQ ++ + Sbjct: 238 DMMENQMAMMQKLMVWVMPVLSLVGAYFWHVGLAVYMLTNTSWTFVQQVLVYRKMD 293 >gi|221091302|ref|XP_002169136.1| PREDICTED: similar to Mitochondrial inner membrane protein OXA1L [Hydra magnipapillata] Length = 424 Score = 88.5 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 118/357 (33%), Gaps = 87/357 (24%) Query: 258 YWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPT 317 +++S I S + + + S+ PG S + Sbjct: 73 FFSSTSILSNIQACGLHATACTGEAGIEEGGSSSGIADAEPGNSES----SIEPQAVNEI 128 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVK 372 ++ + + ++ + + I+ TTV + Sbjct: 129 LNDVGSMNTFVTGVDVPITTLEGLGGYTPVGFVHNIFDFIHLSVGLPWWGTIIATTVAFR 188 Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNIN 425 L FPL K +TA + ++P++++L+EK +++ + +K HN N Sbjct: 189 ALVFPLMIKGQANTARLAAVKPELEKLQEKLREAANYHNPNIRAQASIELQDFFKKHNCN 248 Query: 426 PLAGCWPILLQIPVFFAIY----KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 PL L+Q+P+F + + K+ ++ +E W DL+AADP IF Sbjct: 249 PLKSIISPLVQLPLFISFFIAIRKMCNLPVESLQTGGILWFSDLSAADPYMIF------- 301 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIY 541 PI + +M + ++ + +Y Sbjct: 302 ------------PIACAFTMLLTIE------------------------------AIFLY 319 Query: 542 WSWSNVISIVQQAV-----------IMKMHGAEIG-------LIDRLRSTFSKNYNS 580 W SNV+S+VQ V I K+ ++ ++ L++ F + Sbjct: 320 WMTSNVLSLVQVMVLKVPGVMTFFNIPKVVPVKMDPNIQTGTFMENLKAGFKNAKEA 376 >gi|15925080|ref|NP_372614.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu50] gi|15927665|ref|NP_375198.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus N315] gi|21283742|ref|NP_646830.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MW2] gi|49486883|ref|YP_044104.1| hypothetical protein SAS1994 [Staphylococcus aureus subsp. aureus MSSA476] gi|57650764|ref|YP_186898.1| hypothetical protein SACOL2082 [Staphylococcus aureus subsp. aureus COL] gi|82751692|ref|YP_417433.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus RF122] gi|87161292|ref|YP_494692.1| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195993|ref|YP_500806.1| hypothetical protein SAOUHSC_02327 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268542|ref|YP_001247485.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus subsp. aureus JH9] gi|150394606|ref|YP_001317281.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus subsp. aureus JH1] gi|151222206|ref|YP_001333028.1| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus str. Newman] gi|156980406|ref|YP_001442665.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu3] gi|253317154|ref|ZP_04840367.1| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731073|ref|ZP_04865238.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733076|ref|ZP_04867241.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus aureus subsp. aureus TCH130] gi|255006879|ref|ZP_05145480.2| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257426229|ref|ZP_05602644.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus 55/2053] gi|257428887|ref|ZP_05605281.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus 65-1322] gi|257431497|ref|ZP_05607870.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus 68-397] gi|257434206|ref|ZP_05610556.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus E1410] gi|257437118|ref|ZP_05613158.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus M876] gi|257793849|ref|ZP_05642828.1| membrane protein oxaA [Staphylococcus aureus A9781] gi|258407017|ref|ZP_05680167.1| membrane protein OxaA [Staphylococcus aureus A9763] gi|258422038|ref|ZP_05684955.1| membrane-embedded lipoprotein [Staphylococcus aureus A9719] gi|258422909|ref|ZP_05685809.1| membrane-embedded lipoprotein [Staphylococcus aureus A9635] gi|258433592|ref|ZP_05688665.1| membrane protein oxaA [Staphylococcus aureus A9299] gi|258440487|ref|ZP_05690657.1| membrane-embedded lipoprotein [Staphylococcus aureus A8115] gi|258445695|ref|ZP_05693873.1| membrane protein oxaA [Staphylococcus aureus A6300] gi|258450149|ref|ZP_05698244.1| membrane-embedded lipoprotein [Staphylococcus aureus A6224] gi|258453199|ref|ZP_05701190.1| membrane protein oxaA [Staphylococcus aureus A5948] gi|258453396|ref|ZP_05701378.1| membrane protein oxaA [Staphylococcus aureus A5937] gi|262049258|ref|ZP_06022133.1| lipoprotein precursor [Staphylococcus aureus D30] gi|269203726|ref|YP_003282995.1| hypothetical protein SAAV_2144 [Staphylococcus aureus subsp. aureus ED98] gi|282894735|ref|ZP_06302961.1| membrane protein oxaA [Staphylococcus aureus A8117] gi|282904758|ref|ZP_06312632.1| putative lipoprotein [Staphylococcus aureus subsp. aureus C160] gi|282906435|ref|ZP_06314286.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus Btn1260] gi|282909403|ref|ZP_06317218.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911655|ref|ZP_06319454.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus WBG10049] gi|282914937|ref|ZP_06322717.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M899] gi|282920268|ref|ZP_06327992.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C427] gi|282923079|ref|ZP_06330764.1| membrane protein oxaA [Staphylococcus aureus A9765] gi|282925479|ref|ZP_06333133.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C101] gi|282929015|ref|ZP_06336600.1| membrane protein oxaA [Staphylococcus aureus A10102] gi|283771258|ref|ZP_06344147.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus H19] gi|283958870|ref|ZP_06376315.1| putative lipoprotein [Staphylococcus aureus subsp. aureus A017934/97] gi|284025125|ref|ZP_06379523.1| hypothetical protein Saura13_11083 [Staphylococcus aureus subsp. aureus 132] gi|293509008|ref|ZP_06667795.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 58-424] gi|293510921|ref|ZP_06669620.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus M809] gi|293547523|ref|ZP_06672198.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M1015] gi|294850062|ref|ZP_06790799.1| membrane protein oxaA [Staphylococcus aureus A9754] gi|295407021|ref|ZP_06816823.1| membrane protein oxaA [Staphylococcus aureus A8819] gi|296276880|ref|ZP_06859387.1| hypothetical protein SauraMR_11054 [Staphylococcus aureus subsp. aureus MR1] gi|297210090|ref|ZP_06926483.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297246020|ref|ZP_06929877.1| membrane protein oxaA [Staphylococcus aureus A8796] gi|297589843|ref|ZP_06948483.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MN8] gi|300910453|ref|ZP_07127905.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus TCH70] gi|304379271|ref|ZP_07362010.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54038805|sp|P65629|OXAA_STAAN RecName: Full=Membrane protein oxaA; Flags: Precursor gi|54038806|sp|P65630|OXAA_STAAW RecName: Full=Membrane protein oxaA; Flags: Precursor gi|54041694|sp|P65628|OXAA_STAAM RecName: Full=Membrane protein oxaA; Flags: Precursor gi|56749186|sp|Q6G7M0|OXAA_STAAS RecName: Full=Membrane protein oxaA; Flags: Precursor gi|81694068|sp|Q5HEA9|OXAA_STAAC RecName: Full=Membrane protein oxaA; Flags: Precursor gi|122538967|sp|Q2FWG4|OXAA_STAA8 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|123484953|sp|Q2FF36|OXAA_STAA3 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|123548228|sp|Q2YUI9|OXAA_STAAB RecName: Full=Membrane protein oxaA; Flags: Precursor gi|189036365|sp|A7X4S6|OXAA_STAA1 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|189036366|sp|A6U3H6|OXAA_STAA2 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|189036367|sp|A5IUN6|OXAA_STAA9 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|189036368|sp|A6QIT4|OXAA_STAAE RecName: Full=Membrane protein oxaA; Flags: Precursor gi|13701885|dbj|BAB43177.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus N315] gi|14247863|dbj|BAB58252.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu50] gi|21205184|dbj|BAB95878.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MW2] gi|49245326|emb|CAG43801.1| putative membrane protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57284950|gb|AAW37044.1| membrane protein, putative [Staphylococcus aureus subsp. aureus COL] gi|82657223|emb|CAI81663.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus RF122] gi|87127266|gb|ABD21780.1| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203551|gb|ABD31361.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741611|gb|ABQ49909.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus subsp. aureus JH9] gi|149947058|gb|ABR52994.1| 60 kDa inner membrane insertion protein [Staphylococcus aureus subsp. aureus JH1] gi|150375006|dbj|BAF68266.1| membrane protein oxaA precursor [Staphylococcus aureus subsp. aureus str. Newman] gi|156722541|dbj|BAF78958.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus Mu3] gi|253725200|gb|EES93929.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728984|gb|EES97713.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus aureus subsp. aureus TCH130] gi|257270934|gb|EEV03107.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus 55/2053] gi|257274229|gb|EEV05746.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus 65-1322] gi|257277738|gb|EEV08408.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus 68-397] gi|257280845|gb|EEV10990.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus E1410] gi|257283511|gb|EEV13638.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus M876] gi|257787821|gb|EEV26161.1| membrane protein oxaA [Staphylococcus aureus A9781] gi|257841350|gb|EEV65794.1| membrane protein OxaA [Staphylococcus aureus A9763] gi|257841938|gb|EEV66370.1| membrane-embedded lipoprotein [Staphylococcus aureus A9719] gi|257846933|gb|EEV70947.1| membrane-embedded lipoprotein [Staphylococcus aureus A9635] gi|257849323|gb|EEV73302.1| membrane protein oxaA [Staphylococcus aureus A9299] gi|257852556|gb|EEV76474.1| membrane-embedded lipoprotein [Staphylococcus aureus A8115] gi|257855534|gb|EEV78471.1| membrane protein oxaA [Staphylococcus aureus A6300] gi|257856623|gb|EEV79529.1| membrane-embedded lipoprotein [Staphylococcus aureus A6224] gi|257859145|gb|EEV82002.1| membrane protein oxaA [Staphylococcus aureus A5948] gi|257864377|gb|EEV87123.1| membrane protein oxaA [Staphylococcus aureus A5937] gi|259162623|gb|EEW47190.1| lipoprotein precursor [Staphylococcus aureus D30] gi|262076016|gb|ACY11989.1| hypothetical protein SAAV_2144 [Staphylococcus aureus subsp. aureus ED98] gi|269941690|emb|CBI50097.1| putative membrane protein [Staphylococcus aureus subsp. aureus TW20] gi|282312880|gb|EFB43281.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C101] gi|282316128|gb|EFB46509.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus C427] gi|282321140|gb|EFB51471.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M899] gi|282324420|gb|EFB54733.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus WBG10049] gi|282326673|gb|EFB56971.1| membrane-embedded lipoprotein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330385|gb|EFB59903.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus Btn1260] gi|282589321|gb|EFB94413.1| membrane protein oxaA [Staphylococcus aureus A10102] gi|282593270|gb|EFB98267.1| membrane protein oxaA [Staphylococcus aureus A9765] gi|282594791|gb|EFB99768.1| putative lipoprotein [Staphylococcus aureus subsp. aureus C160] gi|282762823|gb|EFC02957.1| membrane protein oxaA [Staphylococcus aureus A8117] gi|283459463|gb|EFC06556.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus H19] gi|283789588|gb|EFC28411.1| putative lipoprotein [Staphylococcus aureus subsp. aureus A017934/97] gi|285817755|gb|ADC38242.1| OxaI/YidC membrane insertion protein [Staphylococcus aureus 04-02981] gi|290919643|gb|EFD96716.1| putative lipoprotein [Staphylococcus aureus subsp. aureus M1015] gi|291094712|gb|EFE24984.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 58-424] gi|291466206|gb|EFF08733.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus M809] gi|294823010|gb|EFG39442.1| membrane protein oxaA [Staphylococcus aureus A9754] gi|294968046|gb|EFG44073.1| membrane protein oxaA [Staphylococcus aureus A8819] gi|296885290|gb|EFH24230.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177019|gb|EFH36274.1| membrane protein oxaA [Staphylococcus aureus A8796] gi|297576971|gb|EFH95685.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus MN8] gi|300888295|gb|EFK83486.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus TCH70] gi|302333736|gb|ADL23929.1| OxaI/YidC membrane insertion protein [Staphylococcus aureus subsp. aureus JKD6159] gi|302751971|gb|ADL66148.1| OxaI/YidC membrane insertion protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304342130|gb|EFM08030.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830442|emb|CBX35284.1| 60Kd inner membrane family protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128761|gb|EFT84761.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus CGS03] gi|315193252|gb|EFU23650.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus CGS00] gi|315196976|gb|EFU27318.1| lipoprotein precursor [Staphylococcus aureus subsp. aureus CGS01] gi|320140737|gb|EFW32589.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus subsp. aureus MRSA131] gi|320143713|gb|EFW35490.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus subsp. aureus MRSA177] gi|323439193|gb|EGA96920.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus O11] gi|323442429|gb|EGB00058.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus O46] gi|329724000|gb|EGG60524.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus subsp. aureus 21189] gi|329726332|gb|EGG62800.1| putative stage III sporulation protein J [Staphylococcus aureus subsp. aureus 21172] gi|329729297|gb|EGG65705.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus aureus subsp. aureus 21193] Length = 290 Score = 88.5 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 101/252 (40%), Gaps = 35/252 (13%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 ++ PM ++ + N L N+G+AI++ + ++++ P Y ++ M+ Sbjct: 32 FYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKV 91 Query: 396 IDELREKFKQ--------SPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIY 444 EK ++ + ++Q+YK +++NP + GC P+L+Q+P+ +Y Sbjct: 92 AKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLY 151 Query: 445 KVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ + + P + W DL D I ++ + + Sbjct: 152 FVLKDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAGVLYFIQAY 193 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMH 560 + K P + M++ P++ ++ S + L +YWS S +VQ I Sbjct: 194 VSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEK 253 Query: 561 GAEIGLIDRLRS 572 A+ + + + Sbjct: 254 VAKKEVQPFIEA 265 >gi|320010617|gb|ADW05467.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces flavogriseus ATCC 33331] Length = 256 Score = 88.5 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 22/246 (8%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 M F + + L+ + + AI+L T V+L PL++ Sbjct: 1 MSAFMSAFASLVGALADLLQPLFQH-ASTAAAIVLFTALVRLAVHPLSRAAARGQKARTK 59 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP+I ELR+K ++P +QKA+++L+ ++PL+GC P LLQ+P FF +Y + S Sbjct: 60 LQPQIAELRKKHSKNPD-RMQKALMELHAKEKVSPLSGCLPSLLQMPAFFLLYH-LFSSQ 117 Query: 452 EMRHAPFWGWIKDL-AAADPT-NIFTLFGILPFYLPGFMHVGIWPIIMSLSMF------I 503 + P +L A L PF G +++G++ I+ +++ F Sbjct: 118 RIGGEPNSLLGHELFGAPLGERWHHALSEGGPFGPQGLVYLGLFVIVAAVATFNYGRTKR 177 Query: 504 QMKMSPPPAD--------KGQAMILNWMPVVFVFALSS---FPAGLIIYWSWSNVISIVQ 552 QM +P G + MP++ L S P +Y S + ++ Sbjct: 178 QMAANPMTPATGPDGQPVPGMGAMTKVMPLMSFLTLVSVAYVPLAAALYIVTSTTWTALE 237 Query: 553 QAVIMK 558 +A + + Sbjct: 238 RAYLYR 243 >gi|300814725|ref|ZP_07094973.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511112|gb|EFK38364.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 244 Score = 88.5 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 20/244 (8%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + ++ + ++ + + ++I++TT+ +K+L PL Q + M +QP+I Sbjct: 11 IFIRYVYNLIAQIIPNEPTNISYYALSIIITTLILKILVLPLTISQMKNQKKMAELQPEI 70 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 ++++K+K PQ L QLYK+ N N L+GC P+++Q+ V F Y+ Sbjct: 71 AKIQKKYKN-DPQTLAMKQRQLYKSANYNVLSGCLPMIVQLLVLFGFYRCFYKP-----Q 124 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPAD 513 + + A L I P + +++ F + SP Sbjct: 125 TYIF-----SQAGFYQAMNKNFFYISNLGVADKTMILPALAAITTFFTSYLATKSPAAGA 179 Query: 514 ------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 ++ MP++ F + A LIIYW+ SN+ +IVQQ V+ + Sbjct: 180 GQDQAKSMMNSMMVAMPIMIFFMGRTLQAELIIYWTVSNIFAIVQQLVVNNFVKKSVEES 239 Query: 568 DRLR 571 + LR Sbjct: 240 NELR 243 >gi|321259157|ref|XP_003194299.1| hypothetical protein CGB_E3570C [Cryptococcus gattii WM276] gi|317460770|gb|ADV22512.1| Conserved hypothetical protein [Cryptococcus gattii WM276] Length = 468 Score = 88.5 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 96/286 (33%), Gaps = 32/286 (11%) Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMFMLMSYFYNLVGNFGIAIMLTTVF 370 ++ E A + L G+ + L++ L ++ AI TTV Sbjct: 97 QEVLNSEEAVHAAMKLSDLKLIGYDHGILSITGWFTDGLVALHTELGLSWWAAIAGTTVL 156 Query: 371 VKLLFFPLAKKQYVS-------TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 ++L L ++ + + ++ + + L K HN Sbjct: 157 IRLCLTRLVVNTQKHSVRLAAVNPQIQELMTEAKTASANKDTHMQTLISQRLRDLMKEHN 216 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGI 479 +NPL L+Q+P+F + ++ + GW+ DL AADP I + Sbjct: 217 VNPLRPLMLPLIQMPIFLTFFSIVRGLANLPLPQLKEGGLGWVTDLTAADPYYILPATSL 276 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DKGQAMILNWMPVVFVFALSSFP 535 L L P SP + Q P++ FP Sbjct: 277 LFTNLVFKFGADGVPTAAKAG-------SPMTTAHIRNFIQLTTFLSFPLIM-----YFP 324 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + L+ YW++S +++Q +I++ + L + + ++ Sbjct: 325 SALLFYWTFSTGFTLLQS-IILRQPIVKRYLGLPITKAQALEPGAE 369 >gi|49484314|ref|YP_041538.1| hypothetical protein SAR2179 [Staphylococcus aureus subsp. aureus MRSA252] gi|56749221|sp|Q6GEY5|OXAA_STAAR RecName: Full=Membrane protein oxaA; Flags: Precursor gi|49242443|emb|CAG41159.1| putative membrane protein [Staphylococcus aureus subsp. aureus MRSA252] Length = 290 Score = 88.5 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 101/252 (40%), Gaps = 35/252 (13%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 ++ PM ++ + N L N+G+AI++ + ++++ P Y ++ M+ Sbjct: 32 FYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKV 91 Query: 396 IDELREKFKQ--------SPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIY 444 EK ++ + ++Q+YK +++NP + GC P+L+Q+P+ +Y Sbjct: 92 AKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLY 151 Query: 445 KVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ + + P + W DL D I ++ + + Sbjct: 152 FVLKDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAGVLYFIQAY 193 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMH 560 + K P + M++ P++ ++ S + L +YWS S +VQ I Sbjct: 194 VSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEK 253 Query: 561 GAEIGLIDRLRS 572 A+ + + + Sbjct: 254 VAKKEVQPFIEA 265 >gi|160902082|ref|YP_001567663.1| 60 kDa inner membrane insertion protein [Petrotoga mobilis SJ95] gi|160359726|gb|ABX31340.1| 60 kDa inner membrane insertion protein [Petrotoga mobilis SJ95] Length = 465 Score = 88.1 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 76/470 (16%), Positives = 161/470 (34%), Gaps = 60/470 (12%) Query: 98 HLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTP-- 155 + +++ + L N F D + N+ + ++++ + +T P Sbjct: 35 NQEINIEMKLYRLKLDQNGHILNFELYDSRTKKYNLVYEYTGDSYDILDTQNMTEILPSN 94 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + + + + N D + G ++ ++ Sbjct: 95 YNIRLAEDQSYIEVNYFFPNGGQKIYKFYNDPNYHFDVQFKNLYGYVVLPSISFSSGIRY 154 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 F++ + + +++ P + +Q+ Sbjct: 155 SGNVFVSYIDKSVSTGEALDST----------------------LAIYTPEEIEFSQNQY 192 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 + + + + I ++ + + K Sbjct: 193 LFPLNYSDQKIISYLGPTKKIFIKETFDGIEEGIVYSTVIDLMQDLGK------------ 240 Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +G F I + + + GNFG AI+L T+ V + FP+ +Q S MK +QP+ Sbjct: 241 FGPFNNIFYWFVNFFWWLFKVTGNFGWAIILFTLIVNAILFPVYGRQKKSMIEMKQLQPE 300 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 ++++R+K+K Q Q+ ++LYK +NP GC L+ +P+ +++VI E + Sbjct: 301 LEKIRKKYKNP--QKQQEETLKLYKEKGVNPAGGCLTSLIPLPIMIILWQVIYY-FEGSY 357 Query: 456 A--PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 A P + DL+ F +L + ++ ++MS D Sbjct: 358 AYNPRFLLWTDLSLG--GFQANFFLLLLAIIASLINA----LLMS-------------QD 398 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 A M VVF F L P G+ IY+S + VI + V +++ + Sbjct: 399 ARSAWTSVIMSVVFPFILIGLPVGVFIYYSLNTVIQTLLTFVYNRIYNVK 448 >gi|257067219|ref|YP_003153475.1| 60 kDa inner membrane insertion protein [Anaerococcus prevotii DSM 20548] gi|256799099|gb|ACV29754.1| 60 kDa inner membrane insertion protein [Anaerococcus prevotii DSM 20548] Length = 245 Score = 88.1 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 36/229 (15%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + IAI++ T+ V LL P+ Q K +PK++E+++K+ Q++Q+ M +LY Sbjct: 33 YAIAIVIMTLLVSLLIIPMTVSQQKQAERTKVFKPKMEEIQKKY-GYDQQIMQQKMQELY 91 Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISISLEMRHA-------PFWGWIKDLAAADPT 471 K + P L+GC +++QI + F +++++S + + + WI DL DP Sbjct: 92 KEEGVTPGLSGCLVMIIQILILFGLFRMMSDTTKYVFTEGLDNIRTNFYWIPDLLQKDPY 151 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA---------MILNW 522 P++ SLS S + Q +L Sbjct: 152 WFG------------------LPLLTSLSQVGVQLFSMKTNPQMQQAGGAMGGMNNMLLL 193 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 MP+++ F PAGL +Y++ S++ +V ++ + ++ + Sbjct: 194 MPLMYFFVFRGLPAGLPLYYTLSSLFRLVIMVIMHFSMRNKKMELENEK 242 >gi|170016762|ref|YP_001727681.1| preprotein translocase subunit YidC [Leuconostoc citreum KM20] gi|169803619|gb|ACA82237.1| Preprotein translocase subunit YidC [Leuconostoc citreum KM20] Length = 304 Score = 88.1 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 96/264 (36%), Gaps = 43/264 (16%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + +I P+ +M+ +++ G AI++ T ++L+ P Q V+T + Sbjct: 27 HSKMYRWIGHPLADIMTNIAHVIGGPNGIGWAIIIITAILRLVLLPFFLNQQVNTTINQI 86 Query: 392 IQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVFF 441 + R+ Q AM+ LY+ ++++ + G + +Q+PVF Sbjct: 87 KMQTLKPEIDKLQALSRKAGTTEEQQKASMAMMSLYRENDVSVIGGISFLTMAMQLPVFS 146 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y I + ++ A F G+ +L+ ++ II L Sbjct: 147 GLYSAILHAPALKGASFLGF--NLSHP---------------------QIVFAIISGLVY 183 Query: 502 FIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 IQ ++ + Q ++ P++ + +Y+ + +++Q + Sbjct: 184 LIQAWLAMQHMPEEQKKTSAAMMFISPIMIFGFAMIASGAIGLYFVVGGLFALIQTLI-- 241 Query: 558 KMHGAEIGLIDRLRSTFSKNYNSQ 581 H GL R+ F + Sbjct: 242 -QHFQRPGLEKRVALEFKIKKTAD 264 >gi|327470412|gb|EGF15868.1| SpoIIIJ family protein [Streptococcus sanguinis SK330] Length = 307 Score = 88.1 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391 W + + N +G+AI++ T+ V+++ + K + + M Sbjct: 35 LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 +P ++E+ K + Q Q+ ++ K + ++ GC P+L+Q+P F A++ Sbjct: 95 FKPIFAPIQERIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + + WIKDLA +D I+ + +IQ Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------WALTAIVGILYYIQS 192 Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D+ Q + +M P++ V PA + +YW I I+ + + Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINY 250 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 L ++ F KN Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270 >gi|237784737|ref|YP_002905442.1| putative inner membrane protein translocase component YidC [Corynebacterium kroppenstedtii DSM 44385] gi|237757649|gb|ACR16899.1| putative membrane protein [Corynebacterium kroppenstedtii DSM 44385] Length = 447 Score = 87.7 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 101/267 (37%), Gaps = 47/267 (17%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM- 415 + ++ ++ L + V+L+ P A QY ST N++P I+++RE++K P +K Sbjct: 29 ISSWIASLFLLVMTVRLILLPFAYAQYKSTRIQVNLRPVINQIREEYKDKPGTAARKERI 88 Query: 416 ---IQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---------SISLEMRHAPF-WGWI 462 + K AGC P+ +Q+P F +Y+V+ + E H P + Sbjct: 89 AKEQKARKDAGYRLSAGCLPVFIQLPFFLGLYRVLIHMARPKGGLGTTE--HQPIGFLTS 146 Query: 463 KDLA---------AADPTNIFTLFGILPFYLPGFMHVGIW--PIIMSLSMFIQMKMS--- 508 +D+ P L + P+++ S F + MS Sbjct: 147 QDVGQFLQAKAFGVPLPAYAAMASERLQAMGTDKSTIYTLAVPLVLIASTFTTINMSYST 206 Query: 509 ----------PPPADKGQAMI--LNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P A + Q +I + M P++F P ++ YW +N+ ++ Q Sbjct: 207 YRSYRQLEHDNPIAVRMQKIIIPMAIMGSASPLLFGLTS-PVPVAILFYWVGNNLWTMSQ 265 Query: 553 QAVIMKMHGAEIGLIDRLRSTFSKNYN 579 ++ + + R F++ Sbjct: 266 NILLYRTIDKKYPYTQEFREHFARTKA 292 >gi|242371581|ref|ZP_04817155.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis M23864:W1] gi|242350701|gb|EES42302.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis M23864:W1] Length = 286 Score = 87.7 bits (215), Expect = 5e-15, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 106/261 (40%), Gaps = 35/261 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394 +F +PM L+ + N V N +G+AI++ + ++L+ P Y ++ M+ Sbjct: 32 FFNTFVQPMKHLLQWLGNDVFNNDYGLAIIILVLVIRLILLPFMLSNYKNSHMMREKMKV 91 Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + ++++YK +++NP+ GC P+L+Q+P+ +Y Sbjct: 92 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIMGLY 151 Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ L + P + W +L D I ++ + + Sbjct: 152 FVLKDKLVSGLSAHPHFLWF-NLTKPD-----------------IWITIIAGVLYFIQAY 193 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMH 560 + K P + M++ P++ ++ + L +YWS S + ++Q + Sbjct: 194 VSSKTMPQEQRQMGYMMMIVSPIMIIWISLQASSALGLYWSVSALFLVIQTHFANVYYSK 253 Query: 561 GAEIGLIDRLRSTFSKNYNSQ 581 A+ + + ++ S+ Sbjct: 254 LAKKEVQPFIEQYEKEHNPSK 274 >gi|213026875|ref|ZP_03341322.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 195 Score = 87.7 bits (215), Expect = 5e-15, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 60/204 (29%), Gaps = 18/204 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 A + +K L +IN +G + L Y ++ SN P L + + Y Sbjct: 51 GVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIY 108 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD 175 A+ N + + + + +A F +T Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFK 168 Query: 176 -EHYLFKIVDTVTNNSIDQIRFSP 198 Y + +V N + P Sbjct: 169 RGDYAVNVNYSVQNTGEKPLESPP 192 >gi|145347471|ref|XP_001418188.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] gi|144578417|gb|ABO96481.1| Oxa1 family transporter: 60 KD inner membrane protein OxaA-like protein [Ostreococcus lucimarinus CCE9901] Length = 304 Score = 87.7 bits (215), Expect = 5e-15, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 40/243 (16%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E++ + + M YF+ + +AI+ TVF++ + FPL Q +TA M Sbjct: 27 EVVPVASQSWPTTAALMYAMEYFHVAHGLEWWLAIVGATVFMRTITFPLIVMQMRNTAKM 86 Query: 390 KNIQPKIDELREKFKQSPPQ------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + +P+++ L+ K K +P Q K M +++K +++NP+ PIL+ PVF + Sbjct: 87 QLCKPELEALQAKMKSNPQQDPELANAYYKEMQKVWKKYDVNPVKSFAPILINAPVFISF 146 Query: 444 YKVISI------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 + IS S E + DL+ ADPT PI+ Sbjct: 147 FFAISKMAQGVPSFESGGPSMY---PDLSMADPTYS-------------------LPILS 184 Query: 498 SLSMFIQMKMS----PPPADKGQAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 SL+ +++ + Q + V V +SFP G+ +YW SN+ S Q Sbjct: 185 SLTFLASVELGAVEGMQTSQSAQMKWFLRALAVAMVPLTASFPQGVFVYWITSNIFSGFQ 244 Query: 553 QAV 555 ++ Sbjct: 245 TSI 247 >gi|260950689|ref|XP_002619641.1| hypothetical protein CLUG_00800 [Clavispora lusitaniae ATCC 42720] gi|238847213|gb|EEQ36677.1| hypothetical protein CLUG_00800 [Clavispora lusitaniae ATCC 42720] Length = 353 Score = 87.4 bits (214), Expect = 6e-15, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 93/283 (32%), Gaps = 24/283 (8%) Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 F T S+ + + E ++ + I Y + Sbjct: 20 FVRFNSTSEAQNSVVSEIKTSLPSFENTSLPETLMTSDQIGYLQSIGLADGYGPTALIER 79 Query: 349 LMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR---EKFK 404 ++ Y + G I+ T + FPL K + A M ++P++D+L + Sbjct: 80 MLEYTHVYSGLPWWGTIIAGTFIARAFMFPLYVKSSANMAKMARVKPELDQLMNDIKTGD 139 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPIL---LQIPVFFAIYKVISISLEMRHAPFWGW 461 + + +LYK + I P+ L F A K+ + +E W Sbjct: 140 NEDRMLAMRKRTKLYKENGIKTAHSLLPMAQLPLAYGFFQATRKMAAYPVEGFSTQGAYW 199 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS-PPPADKGQAMIL 520 +DL DP + + I ++ M + + ++ Sbjct: 200 FQDLTQVDPY----------------LGLQILTALVVTGMMRSGGETGAQAMNPMMKKVM 243 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 W+P + S + +++Y++ ++V S Q V+ + + Sbjct: 244 TWLPFASILITQSMSSAVVLYFAANSVFSFFQSLVLKNKYFRK 286 >gi|291548772|emb|CBL25034.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Ruminococcus torques L2-14] Length = 444 Score = 87.4 bits (214), Expect = 6e-15, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 26/145 (17%) Query: 462 IKDLAA--ADPTNIFTLFGILPF---------------YLPGFMHVGIWPIIMSLSMFIQ 504 I DLA D F + + G + + P++ L+ FI Sbjct: 211 ITDLAQQTMDKVTHLNSFLGINIGEQPLTQLTAAFHNGSVVGIILAVLIPVLAGLTQFIS 270 Query: 505 MKMSPPPA-----DKG--QAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +K+ P PA + + + MP++ VF + PAGL +YW+ S + +QQ I Sbjct: 271 VKLQPQPAGDDKDNPMASSMKTMTYTMPLISVFMGFTLPAGLGLYWAASAAVRCIQQLAI 330 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581 K + L + ++ K + Sbjct: 331 NKYLSTK-SLDEMIKENQKKAQKKR 354 Score = 47.3 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 5/123 (4%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + I + + + M + + + + N G+ I++ T+ + L PL KQ + Sbjct: 13 DWPIIKQIAWLLGQVMNGIFNVLSKIGIENIGVCIIIFTIIIYTLMIPLTIKQQKFSKMS 72 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYK 445 +QP+I ++++K++ Q + +Y+ + + GC P+L+Q+P+ FA+Y Sbjct: 73 AVMQPEIKKIQKKYEGKKDQASMMKQQEEINLVYEKYGTSMTGGCLPMLIQMPILFALYP 132 Query: 446 VIS 448 VI Sbjct: 133 VIR 135 >gi|283471308|emb|CAQ50519.1| membrane protein OxaA [Staphylococcus aureus subsp. aureus ST398] Length = 290 Score = 87.4 bits (214), Expect = 6e-15, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 101/252 (40%), Gaps = 35/252 (13%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 ++ PM ++ + N L N+G+AI++ + ++++ P Y ++ M+ Sbjct: 32 FYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKV 91 Query: 396 IDELREKFKQ--------SPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIY 444 EK ++ + ++Q+YK +++NP + GC P+L+Q+P+ +Y Sbjct: 92 AKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLY 151 Query: 445 KVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ + + P + W DL D I ++ + + Sbjct: 152 FVLKDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAGVLYFIQAY 193 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMH 560 + K P + M++ P++ ++ S + L +YWS S +VQ I Sbjct: 194 VSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEK 253 Query: 561 GAEIGLIDRLRS 572 A+ + + + Sbjct: 254 VAKKEVQPFIEA 265 >gi|21325713|dbj|BAC00334.1| Preprotein translocase subunit YidC [Corynebacterium glutamicum ATCC 13032] Length = 434 Score = 87.4 bits (214), Expect = 6e-15, Method: Composition-based stats. Identities = 55/287 (19%), Positives = 105/287 (36%), Gaps = 50/287 (17%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVS 385 + + P+ +M ++ L+ N + ++ + ++ + P + Y S Sbjct: 10 NTIVLDILIYPVSGVMKLWHLLLHNVAGLDDSLAWFFSLFGLVITIRAIIAPFTWQMYKS 69 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFF 441 +I+P LRE++K + + + + L K + INPLAGC P L+QIP+ Sbjct: 70 GRTAAHIRPHRAALREEYKGKYDEASIRELQKRQNDLNKEYGINPLAGCVPGLIQIPIVL 129 Query: 442 AIYKVISISLEMRHA---PFWGWIKDLA--------------AADPTNIF---------- 474 +Y + P + I L P + Sbjct: 130 GLYWALLRMARPEGGLENPVFQSIGFLTPEEVESFLAGRVSNVPLPAYVSMPTEQLKYLS 189 Query: 475 -TLFGILPFYLPGFMHVGIWPII-MSLSMF--IQMKMSPPPADKGQAMILNWMPVVFVFA 530 T +L F LP F+ I I M++SM+ Q G + M ++ Sbjct: 190 TTQAEVLSFVLPLFITAAILTAINMAMSMYRSFQTNDYASGFSNGMLKFMIVMSILAPIF 249 Query: 531 ------LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 FP + +YW +N+ +++Q ++M + + L D + Sbjct: 250 PLSLGLTGPFPTAIALYWVSNNLWTLLQTIIMMVILERKYPLTDDFK 296 >gi|210634757|ref|ZP_03298285.1| hypothetical protein COLSTE_02212 [Collinsella stercoris DSM 13279] gi|210158697|gb|EEA89668.1| hypothetical protein COLSTE_02212 [Collinsella stercoris DSM 13279] Length = 259 Score = 87.4 bits (214), Expect = 6e-15, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 24/260 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +I + +F + G++G++I++ V ++L P+ K STA M+ +QPK+ Sbjct: 1 MWDWIVQILFQALQLIQGFAGDWGLSIIILVVIIRLALTPMMLKSTKSTARMQVLQPKLM 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI------SL 451 E++E++ PQ + M + Y + NPL GC P+L+Q+P+ A++ ++ Sbjct: 61 EIQERYAD-DPQRQAEEMQKFYSENKFNPLGGCLPLLIQMPILIALFNLLRDLGHYFPDA 119 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 + F+ + +L + FG YL + G+ I M++ + Sbjct: 120 AEQGFSFYNILPNLVMSPAQAFVDGFGAALPYLLALILFGVLTFI--PQMYMTRNQTGAQ 177 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM-------------K 558 A M++ M ++ +F PAG+++Y+ S+ ++QQ + + Sbjct: 178 AQST-KMMMVVMTIMMLFMGWGLPAGVLLYYDVSSAWQVIQQIFVTQKVIEKAKAEEEER 236 Query: 559 MHGAEIGLIDRLRSTFSKNY 578 M A I + D +R K Sbjct: 237 MTNAPIEV-DVVRREHKKRP 255 >gi|217033105|ref|ZP_03438569.1| hypothetical protein HPB128_27g12 [Helicobacter pylori B128] gi|216945178|gb|EEC23869.1| hypothetical protein HPB128_27g12 [Helicobacter pylori B128] Length = 369 Score = 87.4 bits (214), Expect = 6e-15, Method: Composition-based stats. Identities = 61/383 (15%), Positives = 110/383 (28%), Gaps = 45/383 (11%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 N N +AIALS + + + F+ P ++ + A Sbjct: 4 NNNTNLILAIALSFLFIALYSYFFQKPNKPTTQTTKQETTNNHTATSPNAPNAFSATQTI 63 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVT-----LLSPSNT 116 Q +S + I+ G + + L+ ++ L S Sbjct: 64 PQENLLSA---ISFEHARIEIDSLG-RIKQVYLKD-KKYLTPKQKGFLEHVGHLFSSKEN 118 Query: 117 KNAYFAELDYVSTANNIEL----------PNSNTVWNLISGKILTPTTPIKLVFKNANNI 166 EL ++ L + S L P + L Sbjct: 119 MQPPLKELPLLAADKLKPLEVRFLDPTLNNKAFNTPYSASKTTLGPNEQLVLTQDLGAFT 178 Query: 167 LFERTISLDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 + + D+ HY KI NN P I A G + Sbjct: 179 IIKTLTFYDDLHYDLKIAFKSPNN------LIPSYVITNGYRPVADLDSYTFSGVLLENN 232 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 DK + + + D + + +L D+Y+ ++ F + Sbjct: 233 DKKIEKIEDKD---AKEIKRFSNTLFLSSVDRYFTTLLFTKDPQGFEALIDS-------- 281 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + + G K++ ++ P +I++G F AK Sbjct: 282 --EIGTKNPLGFISLKNEANLHGYIGPKDYRSLKAIS-----PMLTDVIEYGLITFFAKG 334 Query: 346 MFMLMSYFYNLVGNFGIAIMLTT 368 +F+L+ Y Y VGN+G AI+ T Sbjct: 335 VFVLLDYLYQFVGNWGWAIIFLT 357 >gi|14334120|gb|AAK60543.1|AF382189_1 OXA1 [Podospora anserina] Length = 426 Score = 87.4 bits (214), Expect = 6e-15, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 83/266 (31%), Gaps = 46/266 (17%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTA 387 F + + + M ++ + Y G A I L ++ ++ + Sbjct: 117 GFLKNLGLDYGFGPTALMEWILEHTYIYTGLPWWASIGLVSLAIRAVLVKPMFTAAEMAQ 176 Query: 388 NMKNIQ---PKIDELREKFKQSPPQVLQKAMI--------QLYKTHNINPLAGCWPILLQ 436 +++++ +E + + + + L P L+Q Sbjct: 177 KLQDLKRDPKYEQLEKEVMSAFQGGQADQYAMLDKRNKMKAMRRAVGYKMLPASVPALVQ 236 Query: 437 IPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IPV F ++++I ++ W DL +DP I Sbjct: 237 IPVGFGMFRLIRGMADLPVPSMETGGALWFNDLTVSDPLF-------------------I 277 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM-----PVVFVFALSSFPAGLIIYWSWSNV 547 PI+ + M M++ P Q + M P+ PAGL +Y++ S Sbjct: 278 LPIVGAGLMIASMRVPLPYMASSQQGTMKIMTMVAAPITLGV-SIFLPAGLQLYFAISTF 336 Query: 548 ISIVQQAVIM-----KMHGAEIGLID 568 + QQ + KM G + Sbjct: 337 LQFGQQWLTYQNWFRKMIGLRPVVFG 362 >gi|224087219|ref|XP_002308102.1| inner membrane protein [Populus trichocarpa] gi|222854078|gb|EEE91625.1| inner membrane protein [Populus trichocarpa] Length = 427 Score = 87.4 bits (214), Expect = 6e-15, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 98/256 (38%), Gaps = 22/256 (8%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIA 363 + A A + + A E+ I Y + ++ +N G N+ + Sbjct: 86 STTTTAAADKINVVMDTVAQAAPAANEVAIAAADSYLPVAALQYVIDAVHNFTGLNWWAS 145 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK-----FKQSPPQVLQKAMIQL 418 +++TT+ ++ PL Q +T+ + ++P ++E++++ + QK M +L Sbjct: 146 MVVTTLLIRSAMLPLLINQLKATSKLSILRPHLEEVKQRVDCQVMDPTAVSEGQKEMQKL 205 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLE---MRHAPFWGWIKDLAAADPTNIFT 475 +K H ++P I +Q PVF + + IS E + W DL D IF Sbjct: 206 FKEHGVSPFTPLKGIFIQGPVFISFFLAISNMAEKVPSFKSGGAYWFVDLTTPDGLYIFP 265 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 + ++++ Q M PA + + V V +FP Sbjct: 266 -------------VLTALTFLLTVECNTQEGMEGNPAAGTMKNVSRALAVASVPLTMNFP 312 Query: 536 AGLIIYWSWSNVISIV 551 + YW SN+ S+ Sbjct: 313 KAVFCYWVTSNLFSLA 328 >gi|322377609|ref|ZP_08052099.1| SpoIIIJ family protein [Streptococcus sp. M334] gi|321281374|gb|EFX58384.1| SpoIIIJ family protein [Streptococcus sp. M334] Length = 308 Score = 87.4 bits (214), Expect = 7e-15, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 73/212 (34%), Gaps = 30/212 (14%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWP 432 + A ++P L+E Q Q+A+ K H I+ GC+P Sbjct: 83 SWKATLHSEKMNALKHVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHGISMFGGVGCFP 142 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 ILLQ+P F AIY + + A + G L + + G+L + G+ Sbjct: 143 ILLQMPFFSAIYFAAQHTEGVAQASYLG--IPLGSP-SMILVACAGVLYYLQSLLSLHGV 199 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQ----AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 D+ Q + P+ V PA + +YW + Sbjct: 200 -------------------EDETQREQIKKMAYVSPITIVVFSLISPASVTLYWVVGGFM 240 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 I+QQ ++ + L ++R +KN Sbjct: 241 MILQQFIVN--YIVRPKLRKKVREELAKNPPK 270 >gi|328873194|gb|EGG21561.1| putative oxidase assembly protein [Dictyostelium fasciculatum] Length = 422 Score = 87.0 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 89/235 (37%), Gaps = 32/235 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F + + ++ + + + I TV ++ L PL KQ S A M ++ ++++ Sbjct: 146 SNFNTGIVESINNFSISSGCPWWLCIAGMTVGLRFLILPLTVKQQRSAAAMALVKEEMEK 205 Query: 399 LREKFKQSPPQVLQ--KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS----LE 452 + ++ ++ H ++P+ + L Q P + ++ +I + + Sbjct: 206 HSYLNDGTTEGKMKLFTLQREISVKHGVSPMKLLFVGLAQAPAYIYLFYIIRSACVDFPQ 265 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 W +L+ DP V PII SL + M++S Sbjct: 266 FVTNGGLLWFPNLSIVDPY------------------VYALPIISSLFQWTSMRLSFTET 307 Query: 513 DKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 I L +P+ + FPAGL +YW ++++ +VQ I K + Sbjct: 308 TPLIMKIVFGGLCILPL---YFTLDFPAGLNLYWCINSLLFVVQNY-IFKKPAVK 358 >gi|290581139|ref|YP_003485531.1| hypothetical protein SmuNN2025_1613 [Streptococcus mutans NN2025] gi|254998038|dbj|BAH88639.1| conserved hypothetical protein [Streptococcus mutans NN2025] Length = 271 Score = 87.0 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 87/199 (43%), Gaps = 29/199 (14%) Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTH 422 L T ++ + PL Q S M+ +QP++ L+ K+ + + +LYK + Sbjct: 60 LFTFLIRTILLPLFNLQLKSGQKMQELQPELKALQTKYPGKDRESRMRMAEESQELYKKY 119 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP A +P+L+Q+PV +A+Y+ ++ +E + W+ D+ DP Sbjct: 120 GVNPYASLFPLLIQMPVLWALYQALTR-VEFLKTGSFLWM-DIGDKDPYF---------- 167 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA----LSSFPAGL 538 I P++ ++ F+ ++ A K + ++ M ++ + +G+ Sbjct: 168 ---------ILPVLAAIFTFLSSWLTNKAA-KERNGMMITMNIILPIFILLIGFNLASGV 217 Query: 539 IIYWSWSNVISIVQQAVIM 557 +YW SN + Q ++ Sbjct: 218 ALYWVVSNAYQVFQILLLN 236 >gi|242792517|ref|XP_002481970.1| mitochondrial export translocase Oxa1, putative [Talaromyces stipitatus ATCC 10500] gi|218718558|gb|EED17978.1| mitochondrial export translocase Oxa1, putative [Talaromyces stipitatus ATCC 10500] Length = 527 Score = 87.0 bits (213), Expect = 7e-15, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 104/293 (35%), Gaps = 54/293 (18%) Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLL 374 + + + + + + + M L+ + + G A I + ++ Sbjct: 114 SQLPAIDGIPEKIGYLKELGLDYGWGPSAFMEWLIEHIHIWSGIPWWASIAAAALVTRIA 173 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA-------MIQLYKTHNINPL 427 F + K + A I+ + ELR++ Q Q Q M +LY+ H+I Sbjct: 174 LFHPSLKAADNAAKTGPIKDEAMELRKQRMQMLSQGRQLEAAKAKLAMDELYQKHDIKLW 233 Query: 428 AGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 LLQIP+ F ++V+ + GW+ DL + DP Sbjct: 234 RNFV-PLLQIPLGFGTFRVVRGMATLPVPALAMEHCGWVHDLTSYDPLY----------- 281 Query: 484 LPGFMHVGIWPIIMSLSMFIQMK------MSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 I P + + +M+ MK +S + + +P + + ++ PAG Sbjct: 282 --------ILPALATGAMYFTMKKGVDSGLSGTGSTALGRGLTIGLPAISLLFIAWQPAG 333 Query: 538 LIIYWSWSNVISIVQQAV----IMKM------------HGAEIGLIDRLRSTF 574 L +Y++ S + S+ Q + I + +G + + ++ F Sbjct: 334 LQLYFAASGLFSLGQAYLFNTPITRKLLGIAPIYKPPANGEKQDSLRMIQQEF 386 >gi|156554266|ref|XP_001603843.1| PREDICTED: similar to cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Nasonia vitripennis] Length = 436 Score = 87.0 bits (213), Expect = 8e-15, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 86/229 (37%), Gaps = 35/229 (15%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + A + + + + V I++TT+ V+ L P+ K A M NIQP+I Sbjct: 134 WSPAGLVQQYLDFLHVSVDLPWWATILITTMCVRTLLLPVVIKIQRFAARMHNIQPQIQY 193 Query: 399 LREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---- 447 L+ + ++ L + + K ++P+ LLQ PVF + + + Sbjct: 194 LQSQLSEARKMGDRLEAARLSHELYEFMKQKGVSPIKNAALPLLQAPVFLSFFWALKGMV 253 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 +E W DL DP + PII S+++ ++M Sbjct: 254 QAPVESMKEGGLWWFTDLTVPDPYY-------------------LLPIITSMTLAATIEM 294 Query: 508 SPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ ++ P + + F ++ YW +N+ S+VQ Sbjct: 295 GTDAVRVQSLGLMRYVIRASPYIMFPFIMKFEGAILCYWVSTNMFSLVQ 343 >gi|115252808|emb|CAK98244.1| conserved hypothetical transmembrane protein [Spiroplasma citri] Length = 426 Score = 87.0 bits (213), Expect = 8e-15, Method: Composition-based stats. Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 17/235 (7%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI---MLTTVFVKLLFFPLAKKQYVSTANM 389 +G F F + + + Y + + N I LT++ V+L+ + K + M Sbjct: 112 SPFYGCFVFPVAWILVNLIYGFGGLDNGAGIIGALFLTSLIVRLITLMFSWKAQRNQDKM 171 Query: 390 KNIQPKIDELREKFKQSPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + +Q K E++ K+K S Q Q M+QLY+ ++PL+ L IP A+Y Sbjct: 172 QLMQIKQAEIQAKYKDSKDPAAKQKQQMEMMQLYRKEGVSPLSTIGSSFLSIPFLIAMYT 231 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 V+ + E++ A I ++ + G + F+++ I + M L + + Sbjct: 232 VVRATRELKMAT----IGQISLIEKPWDMITSGNYVYLALLFVYLPIQILSMILPTILNL 287 Query: 506 KMS------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 + + A K Q ++ M VVF S +G+ IYW +S I I+Q Sbjct: 288 RKTRVITKEQKKARKRQFIMQGVMIVVFFVVTISIASGVAIYWIFSAFIQILQTL 342 >gi|19554125|ref|NP_602127.1| putative inner membrane protein translocase component YidC [Corynebacterium glutamicum ATCC 13032] gi|62391778|ref|YP_227180.1| inner membrane protein translocase component YidC [Corynebacterium glutamicum ATCC 13032] gi|38503052|sp|Q8NLK2|OXAA_CORGL RecName: Full=Membrane protein oxaA gi|41327120|emb|CAF20964.1| putative preprotein translocase subunit YidC, SpoIIIJ homolog [Corynebacterium glutamicum ATCC 13032] Length = 422 Score = 87.0 bits (213), Expect = 8e-15, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 104/284 (36%), Gaps = 50/284 (17%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + P+ +M ++ L+ N + ++ + ++ + P + Y S Sbjct: 1 MLDILIYPVSGVMKLWHLLLHNVAGLDDSLAWFFSLFGLVITIRAIIAPFTWQMYKSGRT 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIY 444 +I+P LRE++K + + + + L K + INPLAGC P L+QIP+ +Y Sbjct: 61 AAHIRPHRAALREEYKGKYDEASIRELQKRQNDLNKEYGINPLAGCVPGLIQIPIVLGLY 120 Query: 445 KVISISLEMRHA---PFWGWIKDLA--------------AADPTNIF-----------TL 476 + P + I L P + T Sbjct: 121 WALLRMARPEGGLENPVFQSIGFLTPEEVESFLAGRVSNVPLPAYVSMPTEQLKYLSTTQ 180 Query: 477 FGILPFYLPGFMHVGIWPII-MSLSMF--IQMKMSPPPADKGQAMILNWMPVVFVFA--- 530 +L F LP F+ I I M++SM+ Q G + M ++ Sbjct: 181 AEVLSFVLPLFITAAILTAINMAMSMYRSFQTNDYASGFSNGMLKFMIVMSILAPIFPLS 240 Query: 531 ---LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 FP + +YW +N+ +++Q ++M + + L D + Sbjct: 241 LGLTGPFPTAIALYWVSNNLWTLLQTIIMMVILERKYPLTDDFK 284 >gi|328956378|ref|YP_004373711.1| membrane protein insertase, YidC/Oxa1 family [Coriobacterium glomerans PW2] gi|328456702|gb|AEB07896.1| membrane protein insertase, YidC/Oxa1 family [Coriobacterium glomerans PW2] Length = 260 Score = 87.0 bits (213), Expect = 9e-15, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 114/238 (47%), Gaps = 9/238 (3%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + +I +F ++ + +L G++G+++++ T+ V+L+ P+ K STA M+ QPK++ Sbjct: 1 MWDWIVNILFQILKFIQSLAGDWGLSVIILTLIVRLVLAPVLLKSTKSTARMQVYQPKME 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI------SISL 451 E+++K+ PQ Q+ + + Y ++ NPL GC P+LLQ+P+ A++ ++ Sbjct: 61 EIKQKYAD-DPQRQQQEIQKFYAENHFNPLGGCMPLLLQMPIMIALFTLLKSLPTYFPDF 119 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 + F+ + DL + + G P + + ++ ++ + K Sbjct: 120 DKGSFSFYNLLPDLTTSPSASFAQ--GGASGAAPYLVILVLFGLLSLIPQLYMAKNQTGS 177 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + M+ M VV ++ + PAG+++Y+ S+ VQQ + + + Sbjct: 178 QAQSMKMMSVVMAVVMLWFGWALPAGVLLYYDVSSAWQTVQQIFVTQKILERTKAEEE 235 >gi|145296949|ref|YP_001139770.1| putative inner membrane protein translocase component YidC [Corynebacterium glutamicum R] gi|140846869|dbj|BAF55868.1| hypothetical protein [Corynebacterium glutamicum R] Length = 422 Score = 87.0 bits (213), Expect = 9e-15, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 104/284 (36%), Gaps = 50/284 (17%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + P+ +M ++ L+ N + ++ + ++ + P + Y S Sbjct: 1 MLDILIYPVSGVMKLWHLLLHNVAGLDDSLAWFFSLFGLVITIRAIIAPFTWQMYKSGRT 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIY 444 +I+P LRE++K + + + + L K + INPLAGC P L+QIP+ +Y Sbjct: 61 AAHIRPHRAALREEYKGKYDEASIRELQKRQNDLNKEYGINPLAGCVPGLIQIPIVLGLY 120 Query: 445 KVISISLEMRHA---PFWGWIKDLA--------------AADPTNIF-----------TL 476 + P + I L P + T Sbjct: 121 WALLRMARPEGGLENPVFQSIGFLTPEEVESFLAGRVSNVPLPAYVSMPTEQLEYLSTTQ 180 Query: 477 FGILPFYLPGFMHVGIWPII-MSLSMF--IQMKMSPPPADKGQAMILNWMPVVFVFA--- 530 +L F LP F+ I I M++SM+ Q G + M ++ Sbjct: 181 AEVLNFVLPLFITAAILTAINMAMSMYRSFQTNDYASGFSNGMLKFMIVMSILAPIFPLS 240 Query: 531 ---LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 FP + +YW +N+ +++Q ++M + + L D + Sbjct: 241 LGLTGPFPTAIALYWVSNNLWTLLQTIIMMVILERKYPLTDDFK 284 >gi|161510304|ref|YP_001575963.1| hypothetical protein USA300HOU_2087 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|160369113|gb|ABX30084.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] Length = 251 Score = 87.0 bits (213), Expect = 9e-15, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 93/232 (40%), Gaps = 33/232 (14%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ--------SP 407 L N+G+AI++ + ++++ P Y ++ M+ EK ++ Sbjct: 13 LNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKVAKPEVEKIQEKVKRARTQEE 72 Query: 408 PQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIYKVI--SISLEMRHAPFWGWI 462 + ++Q+YK +++NP + GC P+L+Q+P+ +Y V+ + + P + W Sbjct: 73 KMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLYFVLKDQLVDGLFKYPHFLWF 132 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 DL D I ++ + ++ K P + M++ Sbjct: 133 -DLGRPD-----------------IWITIIAGVLYFIQAYVSSKTMPDEQRQMGYMMMVI 174 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMHGAEIGLIDRLRS 572 P++ ++ S + L +YWS S +VQ I A+ + + + Sbjct: 175 SPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEKVAKKEVQPFIEA 226 >gi|19112969|ref|NP_596177.1| mitochondrial inner membrane translocase Oxa102 [Schizosaccharomyces pombe 972h-] gi|13124377|sp|O43092|OXA12_SCHPO RecName: Full=Mitochondrial inner membrane protein oxa1-2; AltName: Full=Cytochrome oxidase biogenesis protein 1-2; Short=Sp2; Flags: Precursor gi|7363180|emb|CAB83161.1| mitochondrial inner membrane translocase Oxa102 [Schizosaccharomyces pombe] Length = 409 Score = 87.0 bits (213), Expect = 9e-15, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 84/219 (38%), Gaps = 36/219 (16%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + +I V +++ FP+ K ++A + I PK+ E ++ + + Sbjct: 110 WSGLPWWASIAACAVAMRIAVFPIMLKMMKTSAKLAIINPKVAEHMSVLSKAKAEGNSEL 169 Query: 415 MIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMRHAPFWGWIK 463 M+Q LYK +N+NPL + Q +F + + + + +E + W+ Sbjct: 170 MMQATTQIQNLYKVNNVNPLNLLSAPVFQGILFISFFYALKTMAGVPVEGFTDGGFWWVN 229 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM------SPPPADKGQA 517 DL+ DP +IF P+ L M + +++ + Sbjct: 230 DLSQPDPLHIF-------------------PVANGLLMLLNIELGSETGSNKVAMSPSMK 270 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ + +FP + +YW SNV S+ Q A + Sbjct: 271 KFFRFLCLASPLFTMNFPMAIFMYWFPSNVFSVFQGAFL 309 >gi|108705853|gb|ABF93648.1| 60Kd inner membrane protein, expressed [Oryza sativa Japonica Group] Length = 436 Score = 86.6 bits (212), Expect = 9e-15, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 87/263 (33%), Gaps = 50/263 (19%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P F +A ++ N+ I LT++ ++ L PL Q +T Sbjct: 124 FPGEVAAAAADSFAPVAALQHLIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQMKAT 183 Query: 387 ANMKNIQPKIDELRE--------------KFKQSPPQVLQKAMI--------QLYKTHNI 424 A I+ E+R + + +L+ H + Sbjct: 184 AMRPEIEAINLEMRTISSTRIAGNEKSSTRVTDEGSMSTDPQSMLEGKRKLGELFLRHGV 243 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLE---MRHAPFWGWIKDLAAADPTNIFTLFGILP 481 PL + +Q P+F + + IS +E W DL D Sbjct: 244 TPLTPLKGLFIQAPIFMSFFFAISNMVEKVPSFKGGGIYWFTDLTTPD------------ 291 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNW---MPVVFVFALSSFP 535 + I P++ SL+ + ++++ + + N+ M V+ + SFP Sbjct: 292 -------ELLILPMLTSLTFLVTVELNMQDGMEGNPMLKTMKNFSRVMAVLTIPFTMSFP 344 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 + YW SN+ S+ V+ K Sbjct: 345 KAIFFYWVTSNLFSLGYGFVLRK 367 >gi|323351007|ref|ZP_08086664.1| SpoIIIJ family protein [Streptococcus sanguinis VMC66] gi|322122731|gb|EFX94440.1| SpoIIIJ family protein [Streptococcus sanguinis VMC66] Length = 307 Score = 86.6 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 99/260 (38%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391 W + + N +G+AI++ T+ V+++ + K + + M Sbjct: 35 LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 94 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 +P ++++ K + Q Q+ ++ K + ++ GC P+L+Q+P F A++ Sbjct: 95 FKPIFAPIQDRIKNAETQEEKMQAQQELMAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 154 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + + WIKDLA +D I+ + +IQ Sbjct: 155 AAQYTQGVAGSS-FLWIKDLAKSD---------------------WALTAIVGILYYIQS 192 Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D+ Q + +M P++ V PA + +YW I I+ + + Sbjct: 193 VLSLHGIEDETQRNSMKQASYMSPIMIVGFSFLSPAAVTLYWVVGGFIQII--QQFIINY 250 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 L ++ F KN Sbjct: 251 IIRPRLRKQVAEEFEKNPPK 270 >gi|2739285|emb|CAA63844.1| oxa1Sp2 [Schizosaccharomyces pombe] Length = 409 Score = 86.6 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 84/219 (38%), Gaps = 36/219 (16%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + +I V +++ FP+ K ++A + I PK+ E ++ + + Sbjct: 110 WSGLPWWASIAACAVAMRIAVFPIMLKMMKTSAKLAIINPKVAEHMSVLSKAKAEGNSEL 169 Query: 415 MIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMRHAPFWGWIK 463 M+Q LYK +N+NPL + Q +F + + + + +E + W+ Sbjct: 170 MMQATTQIQNLYKVNNVNPLNLLSAPVFQGILFISFFYALKTMAGVPVEGFTDGGFWWVN 229 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM------SPPPADKGQA 517 DL+ DP +IF P+ L M + +++ + Sbjct: 230 DLSQPDPLHIF-------------------PVANGLLMLLNIELGSETGSNKVAMSPSMK 270 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ + +FP + +YW SNV S+ Q A + Sbjct: 271 KFFRFLCLASPLFTMNFPMAIFMYWFPSNVFSVFQGAFL 309 >gi|314934160|ref|ZP_07841521.1| putative lipoprotein [Staphylococcus caprae C87] gi|313653065|gb|EFS16826.1| putative lipoprotein [Staphylococcus caprae C87] Length = 290 Score = 86.6 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 105/260 (40%), Gaps = 35/260 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394 +F +PM L+ + N V N +G+AI++ + ++L+ P Y ++ M+ Sbjct: 32 FFNTFVQPMKHLLQWLGNDVFNNDYGLAIIILVLVIRLILLPFMLSNYKNSHMMREKMKV 91 Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + ++++YK +++NP+ GC P+L+Q+P+ +Y Sbjct: 92 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIMGLY 151 Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ L + P + W +L D I ++ + + Sbjct: 152 FVLKDKLVNGLSDHPHFLWF-NLTKPD-----------------IWITIIAGVLYFVQAY 193 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG- 561 + K P + M++ P++ ++ + L +YWS S + ++Q + Sbjct: 194 VSSKTMPQEQRQMGYMMMIVSPIMIIWISLQASSALGLYWSVSALFLVIQTHFANLYYSK 253 Query: 562 -AEIGLIDRLRSTFSKNYNS 580 A+ + + ++ S Sbjct: 254 LAKKEVQPFIEQYEKEHNPS 273 >gi|313887656|ref|ZP_07821338.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846265|gb|EFR33644.1| membrane protein insertase, YidC/Oxa1 family [Peptoniphilus harei ACS-146-V-Sch2b] Length = 244 Score = 86.6 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 21/232 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + FI + +M + F ++I++ TV +KLL PL Q + M +QP++ Sbjct: 10 TFVKFIYDGLAAIMPQEPAAISFFALSIIIATVIIKLLILPLNISQMKNQKKMAKLQPEL 69 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +++ K+K PQ L +LYK +N N + GC P++L + V A Y+V Sbjct: 70 KKIQTKYKN-DPQTLAAKQQKLYKDNNYNMVGGCLPMVLTMVVLIAFYRVFLN------- 121 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI---QMKMSPPP-- 511 P D + I P+I ++S F+ +P Sbjct: 122 PQTFAFTD---PGFYEAMNKNFFYIKNIDHADKTLIMPVIAAVSTFLVSFITTKNPATQG 178 Query: 512 ADKGQAMILNWM-----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 A QA + P++ + AGL+IYW SN+ SIVQQ + K Sbjct: 179 AGADQAKSMMSTMMVVMPILIFSMARKYAAGLVIYWIVSNIFSIVQQLITNK 230 >gi|332359134|gb|EGJ36955.1| SpoIIIJ family protein [Streptococcus sanguinis SK49] Length = 296 Score = 86.6 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 39/260 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKN 391 W + + N +G+AI++ T+ V+++ + K + + M Sbjct: 24 LIWDVIGQPMADGIQFFAKNSGLGYGLAIIIVTLIVRIIILPLGIYQSWKATLQSEKMNY 83 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYK 445 +P ++E+ K + Q Q+ +I K + ++ GC P+L+Q+P F A++ Sbjct: 84 FKPIFAPIQERIKNAETQEEKMQAQQELIAAQKENGLSMFGGIGCLPLLIQMPFFSALFF 143 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + + WIKDLA +D I+ + +IQ Sbjct: 144 AAQYTQGVAGSS-FLWIKDLAKSD---------------------WALTAIVGILYYIQS 181 Query: 506 KMSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S D+ Q + +M P++ V PA + +YW I I+ + + Sbjct: 182 VLSLHGIEDETQRNSMKQASYMSPIMIVAFSFLSPAAVTLYWVVGGFIQII--QQFIINY 239 Query: 561 GAEIGLIDRLRSTFSKNYNS 580 L ++ F KN Sbjct: 240 IIRPRLRKQVAEEFEKNPPK 259 >gi|313889769|ref|ZP_07823411.1| putative stage III sporulation protein J [Streptococcus pseudoporcinus SPIN 20026] gi|313121814|gb|EFR44911.1| putative stage III sporulation protein J [Streptococcus pseudoporcinus SPIN 20026] Length = 270 Score = 86.6 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 104/233 (44%), Gaps = 27/233 (11%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 ++ + F + + G+ G+ I+L T+ ++LL PL Q S+ M+ Sbjct: 24 DISAHSASGWDQLVYFFAKSVQWLSFNGSIGLGIILFTLLIRLLLMPLFNIQIKSSQKMQ 83 Query: 391 NIQPKIDELREKFKQSPPQVLQK---AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++QP++ +++ K+ + LYK++ +NP A +P+++Q+P+ A+++ + Sbjct: 84 DLQPELKKIQAKYPGKDSESRMALADETQALYKSNGVNPYASLFPLIIQMPIMIALFQAL 143 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ + W +LA D H+ I PI+ +L F+ + Sbjct: 144 TRVPFLK-TGTFLW-TELAQHD-------------------HLYILPILAALFTFLSSWL 182 Query: 508 SPPPA---DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + A + ++ MP++ F +G+++YW SN + Q ++ Sbjct: 183 TNLAAKEKNMVMTVMTYMMPLMIFFMGFKLASGVVLYWVISNAFQVFQLLLLN 235 >gi|302408627|ref|XP_003002148.1| mitochondrial export translocase Oxa1 [Verticillium albo-atrum VaMs.102] gi|261359069|gb|EEY21497.1| mitochondrial export translocase Oxa1 [Verticillium albo-atrum VaMs.102] Length = 497 Score = 86.6 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 85/242 (35%), Gaps = 38/242 (15%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF-PLAKKQYVSTANMK 390 I + Y + M ++ + Y G A + +TV + L +A M+ Sbjct: 158 KAIGLDFGYGPSSCMQWILEHVYIYTGMPWWATIGSTVLLLRLLLLKPTLNAQQGSAKMQ 217 Query: 391 NIQP--KIDELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFF 441 +Q + L++K + S + AM+ ++K +NP A L+QIP + Sbjct: 218 QLQGNAQYAALKQKMQDSMKSGDKSAMMDARQSINHIHKREGVNPFAA-LWGLVQIPFSY 276 Query: 442 AIYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 ++ V++ + W DL+ +DP I P+ Sbjct: 277 GLFIVLNNMAKIPVPSLENGGLLWFNDLSVSDPFF-------------------ILPVAA 317 Query: 498 SLSMFIQMKMSPPPADKGQAMILNWMPVVF----VFALSSFPAGLIIYWSWSNVISIVQQ 553 ++M +K A Q + M +F + PA + Y+ S ++ Q Sbjct: 318 PIAMIAMLKSGTKFAPVQQQAQMKLMMYIFVPLSLIFTIWLPAAVQFYFLCSTLVGWGQN 377 Query: 554 AV 555 + Sbjct: 378 LL 379 >gi|256545946|ref|ZP_05473301.1| sporulation associated-membrane protein [Anaerococcus vaginalis ATCC 51170] gi|256398368|gb|EEU11990.1| sporulation associated-membrane protein [Anaerococcus vaginalis ATCC 51170] Length = 252 Score = 86.6 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 40/239 (16%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + I+I+L TV V L+ P+ Q A IQPK++E+++K+ PQ++Q+ M QLY Sbjct: 33 YAISIILMTVLVSLITIPMTMNQQKQAAKSGEIQPKVEEIKKKYA-YDPQIMQQKMQQLY 91 Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISI------SLEMRH-APFWGWIKDLAAADPT 471 K + P ++ C ++ Q+ + ++Y+VI + EM + W+ L+ ADP Sbjct: 92 KEEGVGPGISSCLVMIFQLLILLSLYRVIQNPNKFIFAGEMHQVKDNFLWVPTLSKADPL 151 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMF----IQMKMSP------PPADKGQAMILN 521 P++ S+S MK SP P +L Sbjct: 152 FYG------------------LPLLTSISQLGVQLFTMKTSPQGQAQNTPGMGSMNNMLL 193 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ---QAVIMKMHGAEIGLIDRLRSTFSKN 577 MPV++ F + PAGL +YW+ S++ ++ Q ++ + +++ S SKN Sbjct: 194 AMPVIYYFVFRNLPAGLPLYWTTSSLARLLILGGQYLVGLSKRDKEEKDEKINSKNSKN 252 >gi|223043994|ref|ZP_03614035.1| membrane protein OxaA 2 [Staphylococcus capitis SK14] gi|222442709|gb|EEE48813.1| membrane protein OxaA 2 [Staphylococcus capitis SK14] Length = 290 Score = 86.6 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 105/260 (40%), Gaps = 35/260 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP- 394 +F +PM L+ + N V N +G+AI++ + ++L+ P Y ++ M+ Sbjct: 32 FFNTFVQPMKHLLQWLGNDVFNNDYGLAIIILVLVIRLILLPFMLSNYKNSHMMREKMKV 91 Query: 395 -------KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIY 444 ++++ Q + ++++YK +++NP+ GC P+L+Q+P+ +Y Sbjct: 92 AKPEVDGIQEKVKRARTQEEKMAANQELMEVYKKYDMNPMKSMLGCLPMLIQMPIIMGLY 151 Query: 445 KVISISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ L + P + W +L D I ++ + + Sbjct: 152 FVLKDKLVNGLSDHPHFLWF-NLTKPD-----------------IWITIIAGVLYFVQAY 193 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG- 561 + K P + M++ P++ ++ + L +YWS S + ++Q + Sbjct: 194 VSSKTMPQEQRQMGYMMMIVSPIMIIWISLQASSALGLYWSVSALFLVIQTHFANMYYSK 253 Query: 562 -AEIGLIDRLRSTFSKNYNS 580 A+ + + ++ S Sbjct: 254 LAKKEVQPFIEQYEKEHNPS 273 >gi|24378835|ref|NP_720790.1| hypothetical protein SMU.337 [Streptococcus mutans UA159] gi|38503009|sp|Q8DVX3|OXAA1_STRMU RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|24376711|gb|AAN58096.1|AE014881_10 conserved hypothetical protein; putative membrane protein [Streptococcus mutans UA159] Length = 271 Score = 86.6 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 87/199 (43%), Gaps = 29/199 (14%) Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP---QVLQKAMIQLYKTH 422 L T ++ + PL Q S M+ +QP++ L+ K+ + + +LYK + Sbjct: 60 LFTFLIRTILLPLFNLQLKSGQKMQELQPELKALQTKYPGKDRESRMRMAEESQELYKKY 119 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 +NP A +P+L+Q+PV +A+Y+ ++ +E + W+ D+ DP Sbjct: 120 GVNPYASLFPLLIQMPVLWALYQALTR-VEFLKTGSFLWM-DIGNKDPYF---------- 167 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFA----LSSFPAGL 538 I P++ ++ F+ ++ A K + ++ M ++ + +G+ Sbjct: 168 ---------ILPVLAAIFTFLSSWLTNKAA-KERNGMMITMNIILPIFILLIGFNLASGV 217 Query: 539 IIYWSWSNVISIVQQAVIM 557 +YW SN + Q ++ Sbjct: 218 ALYWVVSNAYQVFQILLLN 236 >gi|293376115|ref|ZP_06622365.1| putative stage III sporulation protein J [Turicibacter sanguinis PC909] gi|325845257|ref|ZP_08168561.1| putative stage III sporulation protein J [Turicibacter sp. HGF1] gi|292645269|gb|EFF63329.1| putative stage III sporulation protein J [Turicibacter sanguinis PC909] gi|325488698|gb|EGC91103.1| putative stage III sporulation protein J [Turicibacter sp. HGF1] Length = 261 Score = 86.2 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 31/237 (13%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ + + L N G AI+L T ++L+ PL K S A M+ IQP++ +++ Sbjct: 41 FVLPLATFITFLYNILSQNLGFAIILATAIIRLILMPLYSKSNKSMAVMQEIQPEMQKIQ 100 Query: 401 EKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +K++ Q +Q M+ LYK +N NP+ GC LQ+PVF A Y+ IS RH Sbjct: 101 KKYENKKDQASQAKMQTEMMDLYKKYNYNPMMGCILPFLQMPVFLAFYQAIS-----RH- 154 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM------SPP 510 IKD AAA+ F + G M I I++ + +M S Sbjct: 155 ---PLIKDAAAAE-------FFGINLGATGTMPNYILAFIVAGLTILSQRMMNKNMASSA 204 Query: 511 PADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ M++ M P P +Y+ +++IVQ +I K A+ Sbjct: 205 QQNQTSNMMMKVMTYYFPFAMFSITIGTPFAFGLYFLTGQIMTIVQ-YLIFKKPQAK 260 >gi|293380720|ref|ZP_06626768.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus crispatus 214-1] gi|290922684|gb|EFD99638.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus crispatus 214-1] Length = 321 Score = 86.2 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 79/211 (37%), Gaps = 32/211 (15%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCW 431 ++Q ++ + +R K Q+ +LY + ++ GC Sbjct: 90 QNKSVRQQEKMARLQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCL 149 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 P+++Q+P+ + IY+ + S ++ + F+G L++ Sbjct: 150 PLIIQLPIMWGIYQAVFYSPQLAQSKFFG--ISLSSK---------------------SV 186 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNV 547 + II ++ IQ +S + Q + M P++ +F SF L +YW+ SN+ Sbjct: 187 VLAIIATVFTVIQGYISLIGIPEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAASNL 246 Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 + IVQQ ++ + + Sbjct: 247 VMIVQQVIVT--FVLTPSVKKHIADELKDKP 275 >gi|121718317|ref|XP_001276169.1| mitochondrial export translocase Oxa1, putative [Aspergillus clavatus NRRL 1] gi|119404367|gb|EAW14743.1| mitochondrial export translocase Oxa1, putative [Aspergillus clavatus NRRL 1] Length = 434 Score = 86.2 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 88/237 (37%), Gaps = 38/237 (16%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + + + + + + + + G A I+ T + ++ F ++ + N+ Sbjct: 48 MGLDYGWGPSSVIEFFIEHLHIWGGLPWWASIVGTGLLLRAALFVPTLGAADTSTKITNL 107 Query: 393 QPKIDELREKFK-------QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 +P + LR++ + L+ M +++ H + P+L QIP F Y+ Sbjct: 108 RPITEPLRQQMMQLGGQGNHAEMYKLRAEMQRVHHQHGVKTWKTFIPML-QIPFGFGCYR 166 Query: 446 VISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 V+ M GW++DL ADP + P++ SL M Sbjct: 167 VVQGMTAMPVPGLALESVGWLRDLTVADPYF-------------------VLPVLSSLCM 207 Query: 502 FIQMKM------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ ++ + + L MP + ++ FP L +Y+ + + + Q Sbjct: 208 YLSLRKGGENGVNQLQGTAFGRLFLYGMPGISFLFMAFFPGALQLYFVATGLFGLGQ 264 >gi|282917439|ref|ZP_06325192.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus D139] gi|282318641|gb|EFB48998.1| membrane protein oxaA [Staphylococcus aureus subsp. aureus D139] Length = 207 Score = 86.2 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 77/200 (38%), Gaps = 25/200 (12%) Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQ 436 + ++ ++++ Q + ++Q+YK +++NP + GC P+L+Q Sbjct: 1 MMRQKMKVAKPEVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQ 60 Query: 437 IPVFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 +P+ +Y V+ + + P + W DL D I Sbjct: 61 LPIIMGLYFVLKDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAG 102 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 ++ + ++ K P + M++ P++ ++ S + L +YWS S +VQ Sbjct: 103 VLYFIQAYVSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTH 162 Query: 555 V--IMKMHGAEIGLIDRLRS 572 I A+ + + + Sbjct: 163 FANIYYEKVAKKEVQPFIEA 182 >gi|212697392|ref|ZP_03305520.1| hypothetical protein ANHYDRO_01962 [Anaerococcus hydrogenalis DSM 7454] gi|212675584|gb|EEB35191.1| hypothetical protein ANHYDRO_01962 [Anaerococcus hydrogenalis DSM 7454] Length = 252 Score = 86.2 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 40/239 (16%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + I+I+L TV V L+ P+ Q A IQPKI+E+++K+ PQ++Q+ M QLY Sbjct: 33 YAISIILMTVLVSLITIPMTMNQQKQAAKSGEIQPKIEEIKKKYA-YDPQIMQQKMQQLY 91 Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISISL-------EMRHAPFWGWIKDLAAADPT 471 K + P L+ C ++ Q+ + ++Y+VI + + W+ L+ ADP Sbjct: 92 KEEGVGPGLSSCLVMIFQLLILLSLYRVIQSPDKYIFQGSMHQVKDNFLWVPTLSKADPL 151 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM----------ILN 521 P++ S+S + + + QA +L Sbjct: 152 FYG------------------LPLLTSISQLAVQVFTMKTSPQSQAQNTPGMGSMNNMLM 193 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ---QAVIMKMHGAEIGLIDRLRSTFSKN 577 MP+++ F + PAGL +YW+ S++ ++ Q +I + +++ S SKN Sbjct: 194 IMPIIYYFVFRNLPAGLPLYWTTSSLARLIILGGQYLIGLSKRDKEEENEKINSKNSKN 252 >gi|300173702|ref|YP_003772868.1| membrane protein OxaA [Leuconostoc gasicomitatum LMG 18811] gi|299888081|emb|CBL92049.1| Membrane protein oxaA 2 precursor [Leuconostoc gasicomitatum LMG 18811] Length = 305 Score = 86.2 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 89/261 (34%), Gaps = 32/261 (12%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 E + W +++ V G AI++ T ++L+ P Q V+T + Sbjct: 26 EHSKMYRWIGHPLANGMTDIAHIIGGVNGIGWAIIIITAILRLILLPFFLNQQVNTTINQ 85 Query: 391 NIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 + R+ Q AM+ LY+ ++++ + G + +Q+P+F Sbjct: 86 IKMQTLKPEIDKLQALTRKAGTTQEQQQASMAMMSLYRENDVSVIGGISFLTMAMQLPIF 145 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y I + ++ A F P + +I + Sbjct: 146 SGLYSAILHAPALKGAE-------------------FLGFNLGKPQIVFAIAAGVIYLIQ 186 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ M+ P K AM++ P++ + +Y+ + +++Q + H Sbjct: 187 AWLAMQHMPEEQKKTSAMMMFISPIMIFVFAMIASGAIGLYFVVGGLFALIQTLI---QH 243 Query: 561 GAEIGLIDRLRSTFSKNYNSQ 581 GL R+ F + Sbjct: 244 YQRPGLEKRVVREFKIKKTAD 264 >gi|298695364|gb|ADI98586.1| membrane-embedded lipoprotein precursor [Staphylococcus aureus subsp. aureus ED133] Length = 290 Score = 86.2 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 101/252 (40%), Gaps = 35/252 (13%) Query: 338 WFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 ++ PM ++ + N L N+G+AI++ + ++++ P Y ++ M+ Sbjct: 32 FYNTFVDPMKNVLDWLGNNLLNDNYGLAIIILVLVIRIILLPFMLSNYKNSHMMRQKMKV 91 Query: 396 IDELREKFKQ--------SPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIY 444 EK ++ + +IQ+YK +++NP + GC P+L+Q+P+ +Y Sbjct: 92 AKPEVEKIQEKVKRARTQEEKMAANQELIQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLY 151 Query: 445 KVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 V+ + + P + W DL D I ++ + + Sbjct: 152 FVLKDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAGVLYFIQAY 193 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMH 560 + K P + M++ P++ ++ S + L +YWS S +VQ I Sbjct: 194 VSSKTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEK 253 Query: 561 GAEIGLIDRLRS 572 A+ + + + Sbjct: 254 VAKKEVQPFIEA 265 >gi|312437493|gb|ADQ76564.1| lipoprotein [Staphylococcus aureus subsp. aureus TCH60] Length = 202 Score = 86.2 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 76/189 (40%), Gaps = 25/189 (13%) Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIYKVI 447 ++ ++++ Q + ++Q+YK +++NP + GC P+L+Q+P+ +Y V+ Sbjct: 7 EVEKIQEKVKRARTQEEKMAANQELMQVYKKYDMNPIKSMLGCLPMLIQLPIIMGLYFVL 66 Query: 448 --SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + P + W DL D I ++ + ++ Sbjct: 67 KDQLVDGLFKYPHFLWF-DLGRPD-----------------IWITIIAGVLYFIQAYVSS 108 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV--IMKMHGAE 563 K P + M++ P++ ++ S + L +YWS S +VQ I A+ Sbjct: 109 KTMPDEQRQMGYMMMVISPIMIIWISLSSASALGLYWSVSAAFLVVQTHFANIYYEKVAK 168 Query: 564 IGLIDRLRS 572 + + + Sbjct: 169 KEVQPFIEA 177 >gi|227877759|ref|ZP_03995793.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus crispatus JV-V01] gi|256850088|ref|ZP_05555518.1| preprotein translocase subunit YidC [Lactobacillus crispatus MV-1A-US] gi|262047376|ref|ZP_06020333.1| preprotein translocase, YidC subunit [Lactobacillus crispatus MV-3A-US] gi|227862662|gb|EEJ70147.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus crispatus JV-V01] gi|256713060|gb|EEU28051.1| preprotein translocase subunit YidC [Lactobacillus crispatus MV-1A-US] gi|260572350|gb|EEX28913.1| preprotein translocase, YidC subunit [Lactobacillus crispatus MV-3A-US] Length = 321 Score = 86.2 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 94/258 (36%), Gaps = 43/258 (16%) Query: 339 FYFIAKPMFMLMSYFYNLV-------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + ++ +P+ +M +++ I ++ V + L K M Sbjct: 43 YQWLGRPLQNIMIQTAHMIGGDNGAGWGIVIITVVVRVILMPLMLVQQNKSVRQQEKMAR 102 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-------LAGCWPILLQIPVFFAIY 444 +QP++ ++ + Q+ + ++ + GC P+++Q+P+ + IY Sbjct: 103 LQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCLPLIIQLPIMWGIY 162 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + S ++ + F+G L++ + II ++ IQ Sbjct: 163 QAVFYSPQLAQSKFFG--ISLSSK---------------------SVVLAIIATVFTVIQ 199 Query: 505 MKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S + Q + M P++ +F SF L +YW+ N++ IVQQ ++ Sbjct: 200 GYISLIGIPEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIVQQVIVT--F 257 Query: 561 GAEIGLIDRLRSTFSKNY 578 + + Sbjct: 258 VLTPSVKKHIADELKDKP 275 >gi|295693356|ref|YP_003601966.1| preprotein translocase subunit yidc [Lactobacillus crispatus ST1] gi|295031462|emb|CBL50941.1| Preprotein translocase subunit YidC [Lactobacillus crispatus ST1] Length = 321 Score = 85.8 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 39/258 (15%), Positives = 94/258 (36%), Gaps = 43/258 (16%) Query: 339 FYFIAKPMFMLMSYFYNLV-------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + ++ +P+ +M +++ I ++ V + L K M Sbjct: 43 YQWLGRPLQNIMIQTAHMIGGDNGAGWGIVIITVVVRVILMPLMLVQQNKSVRQQEKMAR 102 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-------LAGCWPILLQIPVFFAIY 444 +QP++ ++ + Q+ + ++ + GC P+++Q+P+ + IY Sbjct: 103 LQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCLPLIIQLPIMWGIY 162 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + S ++ + F+G L++ + II ++ IQ Sbjct: 163 QAVFYSPQLAQSKFFG--ISLSSK---------------------SVVLAIIATVFTVIQ 199 Query: 505 MKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S + Q + M P++ +F SF L +YW+ N++ I+QQ ++ Sbjct: 200 GYISLIGIPEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNLVMIIQQVIVT--F 257 Query: 561 GAEIGLIDRLRSTFSKNY 578 + + Sbjct: 258 VLTPSVKKHIADELKDKP 275 >gi|297601977|ref|NP_001051873.2| Os03g0844700 [Oryza sativa Japonica Group] gi|255675045|dbj|BAF13787.2| Os03g0844700 [Oryza sativa Japonica Group] Length = 173 Score = 85.8 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 17/143 (11%) Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADPTN----- 472 YK +++PLAGC P L+ IPV+ +Y+ +S + E + WI LA Sbjct: 1 YKLSDVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAARQSG 60 Query: 473 --IFTLF----GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQA---MILN 521 I LF G P + + P+++ +S ++ ++ PP D Q ++ Sbjct: 61 QGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQGAQAVVK 120 Query: 522 WMPVVFVFALSSFPAGLIIYWSW 544 ++P++ + S P+GL +YW Sbjct: 121 FLPLLIGYFALSVPSGLSLYWCV 143 >gi|312140437|ref|YP_004007773.1| integral membrane protein [Rhodococcus equi 103S] gi|325675949|ref|ZP_08155632.1| membrane protein OxaA [Rhodococcus equi ATCC 33707] gi|311889776|emb|CBH49093.1| putative integral membrane protein [Rhodococcus equi 103S] gi|325553187|gb|EGD22866.1| membrane protein OxaA [Rhodococcus equi ATCC 33707] Length = 293 Score = 85.8 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 102/294 (34%), Gaps = 57/294 (19%) Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F+ P+ ++ +++ + +A+M ++LL A +Q + Sbjct: 1 MLDFVYYPVSAILWFWHKAFGAALGPDNGFAWALAVMFLVFTLRLLLLGPAIRQIRTGLQ 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447 M+ +QP+I L++K+ Q + M +L + H NPL GC P+L+Q PVF +Y V+ Sbjct: 61 MRELQPQIKALQKKYAG-DRQRMALEMQKLQQEHGFNPLMGCLPMLVQAPVFIGLYHVLR 119 Query: 448 ----------------------------------SISLEMRHAPFWGWIKDLAAADPTNI 473 +S + AP I + Sbjct: 120 SFNRTGTGHGGLGMTAQDNANTANYIFSPADVQSFLSARLFGAPISTAIT--SPQSTLES 177 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK----------GQAMILNWM 523 F G +P +I SL+ + S + ++L Sbjct: 178 FAAHGGVPTVATIAAVAIPLMVIASLATHFNARASVARQEPDASANPQTAIMNKLMLWVF 237 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 P+ + +++YW +N+ + QQ ++ E + R + +N Sbjct: 238 PLGVLVGGPFLMIAILLYWVSNNIWTYAQQHLVFARLDRETAVKQRALAQERQN 291 >gi|291561650|emb|CBL40449.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [butyrate-producing bacterium SS3/4] Length = 416 Score = 85.8 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 14/120 (11%) Query: 475 TLFGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSP-----------PPADKGQAMILN 521 T G+ PG++ I P++ ++S + K+ P + + Sbjct: 221 TFLGLNMAEAPGWVPSFAWIIPVLAAVSQWFSTKLMSGNQPSTSADAENPMAQSMKTMTT 280 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 MP+ F + PAGL IYW ++V++I+QQ ++ ++ + D + K + Sbjct: 281 TMPLFSAFICITMPAGLGIYWIATSVVTIIQQLIVNAYMD-KVNIDDMIAKNLEKVNKKR 339 >gi|291319996|ref|YP_003515254.1| hypothetical protein MAGa0630 [Mycoplasma agalactiae] gi|290752325|emb|CBH40296.1| Conserved hypothetical protein [Mycoplasma agalactiae] Length = 715 Score = 85.8 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 71/495 (14%), Positives = 157/495 (31%), Gaps = 57/495 (11%) Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 V ++P N+K + NN +S + Sbjct: 222 DKEKNVFKINPENSKLINEGKFTSKLEVNNNRNSTPFLFDKELSYLTFSSKNDFT----- 276 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 F R I ++ S + + + + + G + + Sbjct: 277 -GFAKFRRDIL----ETLATNTFYSDKSSYYRKALSQVESKLREANYSVDYNGFNKYLVD 331 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS-----FHSQFKY 277 + +K E +++ ++ ++++ + + A I + S + Y Sbjct: 332 KIKNKKASELEFAPNVFYALKYYNKALNKYASELNFSALNQISPVKNSVIEEINNLSNDY 391 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM----- 332 + + + T+ L + A + IP Sbjct: 392 NKINDKNSKEAVELKRKITSLNEQLRNTSRLLSPAPYSTMTVKLTDAVNIPYSGDEPQRV 451 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT------------VFVKLLFFPLAK 380 + +W + + +L+ L + ++ + ++ + Sbjct: 452 IHNWSDAWKLGPFYGLLVFPTAWLSAHLSTSLSHLGGWGTIIVILVLTIILRSAMLAVTF 511 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQ-----KAMIQLYKTHNINPLAGCWPILL 435 KQ V+ + + ++ K ++ K+ + + +LYK H INPL +++ Sbjct: 512 KQTVNQSKQEELKSKKAKIDAKYADFKNNKQMKARQQQEVAELYKKHGINPLDAFVTMII 571 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF-------GILPFYLPGFM 488 +PVF +++VI E + + G L+ A+ + F G+L Sbjct: 572 SLPVFIMMWRVIQSLPEFKSTVWLG----LSFAETSWRRLFFSGEWQYLGLLVVVAAVQG 627 Query: 489 HVGIWPIIMSLSMF-----IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 P I++ F ++ + + A++ Q M +VF F F AGL +YW Sbjct: 628 VAQFLPQILNRKKFKERTSLEEEKALKKANRTQR----IMTIVFFFITLIFSAGLQVYWI 683 Query: 544 WSNVISIVQQAVIMK 558 S + +I+Q I K Sbjct: 684 ISGIWTIIQTLSIHK 698 >gi|116198719|ref|XP_001225171.1| hypothetical protein CHGG_07515 [Chaetomium globosum CBS 148.51] gi|88178794|gb|EAQ86262.1| hypothetical protein CHGG_07515 [Chaetomium globosum CBS 148.51] Length = 600 Score = 85.8 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 83/258 (32%), Gaps = 41/258 (15%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTA 387 F + + + M ++ Y G A I + V +++ +T Sbjct: 265 GFLKTLGLEFGWGPTSLMQTVLESVYVYTGLPWWASIAMVAVGLRVALLKPTLDASENTV 324 Query: 388 NMK------NIQPKIDELREKFKQSPPQVLQKAMIQ--LYKTHNINPLAGCWPILLQIPV 439 + +++++ +A + L L + +LQ+P+ Sbjct: 325 KYQKLLKNPEYAAAMEDMKSLMITGNHMAGAQARAKVSLMNKEAGYSLWKNFAPMLQLPL 384 Query: 440 FFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 + ++++I + W DL AADP I PI Sbjct: 385 GYGMFRLIKGMSALPVPSFETGGILWFTDLTAADPLF-------------------IMPI 425 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF----ALSSFPAGLIIYWSWSNVISIV 551 + L + + M++ P Q + M +V + P+GL +Y+ S+V+ Sbjct: 426 VTGLVVMVGMRIPLPYMAPQQQQTMKTMALVIMPLSTAVGLFLPSGLTLYFLLSSVLHTF 485 Query: 552 Q-----QAVIMKMHGAEI 564 Q Q +M G Sbjct: 486 QTYMMHQHWFRRMVGLRP 503 >gi|160941468|ref|ZP_02088803.1| hypothetical protein CLOBOL_06359 [Clostridium bolteae ATCC BAA-613] gi|158435614|gb|EDP13381.1| hypothetical protein CLOBOL_06359 [Clostridium bolteae ATCC BAA-613] Length = 438 Score = 85.8 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 45/345 (13%), Positives = 101/345 (29%), Gaps = 29/345 (8%) Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL--PGKSITTTNFLFAGAKEFPT 317 +I F S F L+ G + I + ++ + Sbjct: 23 ILGWIMDLLFRFTSTFGILNIGLCIILFTLVTKVLMIPLTIKQQKSSKLMAVMQPEITAI 82 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 Y+ + ++ M++ K + L+ I L V + + Sbjct: 83 QKKYKGKESDQKYAMMMQTEIKAVYEKYGTSMTGGCLPLLIQMPIIFALYRVIYNIPAYV 142 Query: 378 LAKKQYVST---------ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK--THNINP 426 + + Y + + ++ + + LYK + Sbjct: 143 QSVRVYYEAVVSKLPSGYEASQAFTDLAQAHKMVGERFDYTNVNTVIDLLYKLTGQQWDS 202 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 L + + Q + V ++E + + + + L Sbjct: 203 LVNAFSSVGQAVTETGVRVV--DAIENMQ--NFFGLNIAYTPLQVIMNYFNKVDNTTLMT 258 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPPADKGQ------AMILN----WMPVVFVFALSSFPA 536 P++ LS + K+ Q A ++ MP++ VF SF + Sbjct: 259 AFAALCIPLLAGLSQWYSTKL-MTANQPQQSEDAPGANMMKSMNVTMPLMSVFFCFSFAS 317 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 G+ +YW +V +I+QQ I + ++ + D ++ K + Sbjct: 318 GIGLYWVAQSVFTIIQQVGIN-SYLNKVDIDDLVQKNIEKTNKKR 361 >gi|39938735|ref|NP_950501.1| preprotein translocase subunit YidC [Onion yellows phytoplasma OY-M] gi|39721844|dbj|BAD04334.1| preprotein translocase subunit YidC [Onion yellows phytoplasma OY-M] Length = 525 Score = 85.8 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 64/405 (15%), Positives = 129/405 (31%), Gaps = 53/405 (13%) Query: 184 DTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSIS 243 N+ + + + + + +L + Y D S+ Sbjct: 140 FKNKNDKEKTEFKNKLMKDFLTVSAGTNDDYIQNNKYQKKELKDALEFRTYEDKTPLSLE 199 Query: 244 NFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSIT 303 N D Y ++ S S + K+ ++ + Sbjct: 200 NIKLDFD----KDHYAENIKNTSNNDSSNIDIKFTNNNNDHLI-------------SRKL 242 Query: 304 TTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA 363 + + + I ++F + GN G+ Sbjct: 243 FITNSSVPIQFPSRLEWSLFGYFWNVLIISIGSFLYFFSTFLVSGA---SGMFFGNLGLG 299 Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLY 419 I+L T+F++ L +P+ K + NM IQP+I+++++K+ Q +Q ++++Y Sbjct: 300 IVLATIFIRTLTWPIYTKTSTLSMNMSLIQPEIEKVKQKYALKKDPASAQKMQLEILKVY 359 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 + +N + G LQ+P+F AI + +S + P + D P + Sbjct: 360 RKNNFS-FWGFLLSFLQLPLFIAINQTLSRFI----IPGGIFATDKLIEKP--FLGFINL 412 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-----------------KGQAMILNW 522 P + + ++ +MFI K+S D K + Sbjct: 413 NPSNPNNAFVIFLLSFLVGATMFILNKISFKKPDYLKTPSYYLTSEQKQKAKQSEKSMKI 472 Query: 523 MPVVFVFALSSF----PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M V + + F P L +YW N +I Q + K + Sbjct: 473 MSVFMILMMVFFSRSNPI-LSLYWIVGNTYTIFQTLLTRKKMQQK 516 >gi|325846396|ref|ZP_08169365.1| membrane protein insertase, YidC/Oxa1 family [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481580|gb|EGC84620.1| membrane protein insertase, YidC/Oxa1 family [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 252 Score = 85.8 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 40/239 (16%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + I+I+L TV V L+ P+ Q A IQPKI+E+++K+ PQ++Q+ M QLY Sbjct: 33 YAISIILMTVLVSLITIPMTMNQQKQAAKSGEIQPKIEEIKKKYA-YDPQIMQQKMQQLY 91 Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISISL-------EMRHAPFWGWIKDLAAADPT 471 K + P L+ C ++ Q+ + ++Y+VI + + W+ L+ ADP Sbjct: 92 KEEGVGPGLSSCLVMIFQLLILLSLYRVIQSPDKYIFQGSMHQVKDNFLWVPTLSKADPL 151 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM----------ILN 521 P++ S+S + + + QA +L Sbjct: 152 FYG------------------LPLLTSISQLAVQVFTMKTSPQSQAQNTPGMGSMNNMLM 193 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQ---QAVIMKMHGAEIGLIDRLRSTFSKN 577 MP+++ F + PAGL +YW+ S++ ++ Q +I + +++ S SKN Sbjct: 194 IMPIIYYFVFRNLPAGLPLYWTTSSLARLIILGGQYLIGLNKRDKEEENEKINSKNSKN 252 >gi|73748802|ref|YP_308041.1| putative inner membrane protein, 60 kDa [Dehalococcoides sp. CBDB1] gi|289432822|ref|YP_003462695.1| membrane protein insertase, YidC/Oxa1 family [Dehalococcoides sp. GT] gi|73660518|emb|CAI83125.1| putative inner membrane protein, 60 kDa [Dehalococcoides sp. CBDB1] gi|288946542|gb|ADC74239.1| membrane protein insertase, YidC/Oxa1 family [Dehalococcoides sp. GT] Length = 315 Score = 85.4 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 8/223 (3%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 ++ + ++ +NL G+FG+ +++ TV ++L +PL +KQ +T M+ I +D L+ Sbjct: 11 ILSPMINGMVWLSHNLWGSFGLTVIVLTVVIRLALWPLNRKQLTATKKMQEITVHMDALK 70 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 +K Q L + ++LYK ++ P+L+Q P++ A+Y+ I L + F Sbjct: 71 KKHGN-DRQKLAEEQMKLYKESGVSTTGCLVPMLIQFPIWIALYQAIVRVLAVTPEDFMN 129 Query: 461 WIKDL-AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 L + L + + +++ L MF+Q KMS P A Q Sbjct: 130 LSNHLYSWPVVYETLPLSNNFLWMDLSRSDF-VLALLVGLGMFVQQKMSTPKAINQQQAA 188 Query: 520 L-----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 MP +F F SFP+GL YW S V+ I+ Q I Sbjct: 189 QSQMLSFMMPFMFFFFSLSFPSGLAFYWFVSAVVGIIMQYFIT 231 >gi|229826869|ref|ZP_04452938.1| hypothetical protein GCWU000182_02253 [Abiotrophia defectiva ATCC 49176] gi|229788487|gb|EEP24601.1| hypothetical protein GCWU000182_02253 [Abiotrophia defectiva ATCC 49176] Length = 424 Score = 85.4 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 10/117 (8%) Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI---QMKMSPPPAD------KGQAMILNW 522 ++F LF I I P++ + FI QM + P + ++N+ Sbjct: 226 SVFGLFSISDVPGFAKPLTFIVPVLAGVLQFINGKQMMKNQPQTNTNDQASAINKNMMNF 285 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 MP + F +FP G+ +YW ++ I+QQ K+ + + + +R K Sbjct: 286 MPFMQAFFCITFPIGIGVYWIAGSIFMIIQQYFFNKLLKN-VDVDEMIRKNQEKAAK 341 Score = 49.6 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 4/100 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412 + N I I+L T ++ L P+ KQ + P++ E+ +K+K +Q Sbjct: 39 IENAAICILLFTFIMRALMMPMYYKQQKVGKLTSRMTPELQEISKKYKGKRDMESQRKMQ 98 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 + +Y+ + NPL+GC P+L+ +P+ F +Y+++ Sbjct: 99 QETQAVYEKYGSNPLSGCLPVLITLPIMFGLYRIVQSMPA 138 >gi|256843612|ref|ZP_05549100.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN] gi|312984343|ref|ZP_07791685.1| hypothetical protein LBKG_02299 [Lactobacillus crispatus CTV-05] gi|256615032|gb|EEU20233.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN] gi|310894268|gb|EFQ43348.1| hypothetical protein LBKG_02299 [Lactobacillus crispatus CTV-05] Length = 321 Score = 85.4 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 78/211 (36%), Gaps = 32/211 (15%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI-QLYKTHNINPL--AGCW 431 ++Q ++ + +R K Q+ +LY + ++ GC Sbjct: 90 QNKSVRQQEKMARLQPQMKLIQNAMRHKGITPDQQMTLSTWQRELYSKNQVSLTGGMGCL 149 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 P+++Q+P+ + IY+ + S ++ + F+G L++ Sbjct: 150 PLIIQLPIMWGIYQAVFYSPQLAQSKFFG--ISLSSK---------------------SV 186 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNV 547 + II ++ IQ +S + Q + M P++ +F SF L +YW+ N+ Sbjct: 187 VLAIIATVFTVIQGYISLIGIPEEQKKTMQSMMIVNPIMTLFFSLSFSGALALYWAAGNL 246 Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 + IVQQ ++ + + Sbjct: 247 VMIVQQVIVT--FVLTPSVKKHIADELKDKP 275 >gi|115450311|ref|NP_001048756.1| Os03g0116000 [Oryza sativa Japonica Group] gi|113547227|dbj|BAF10670.1| Os03g0116000 [Oryza sativa Japonica Group] Length = 440 Score = 85.4 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 89/267 (33%), Gaps = 54/267 (20%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P F +A ++ N+ I LT++ ++ L PL Q +T Sbjct: 124 FPGEVAAAAADSFAPVAALQHLIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQMKAT 183 Query: 387 ANMKNIQPKIDELR------------------EKFKQSPPQVLQKAMI--------QLYK 420 + ++P+I+ + + + +L+ Sbjct: 184 VKLNAMRPEIEAINLEMRTISSTRIAGNEKSSTRVTDEGSMSTDPQSMLEGKRKLGELFL 243 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLE---MRHAPFWGWIKDLAAADPTNIFTLF 477 H + PL + +Q P+F + + IS +E W DL D Sbjct: 244 RHGVTPLTPLKGLFIQAPIFMSFFFAISNMVEKVPSFKGGGIYWFTDLTTPD-------- 295 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---PADKGQAMILNW---MPVVFVFAL 531 + I P++ SL+ + ++++ + + N+ M V+ + Sbjct: 296 -----------ELLILPMLTSLTFLVTVELNMQDGMEGNPMLKTMKNFSRVMAVLTIPFT 344 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 SFP + YW SN+ S+ V+ K Sbjct: 345 MSFPKAIFFYWVTSNLFSLGYGFVLRK 371 >gi|197294709|ref|YP_001799250.1| Preprotein translocase subunit YidC [Candidatus Phytoplasma australiense] gi|171854036|emb|CAM12009.1| Preprotein translocase subunit YidC [Candidatus Phytoplasma australiense] Length = 471 Score = 85.4 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 76/480 (15%), Positives = 161/480 (33%), Gaps = 46/480 (9%) Query: 124 LDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIV 183 + +S N+ P ++ + + I ++ K +L++ + + Sbjct: 1 MKNISFKKNLFFPLFLSLTLFLLFFWPSVKMKINILQKVKIENDEFFVYTLNDKHQDIKI 60 Query: 184 DTVTN-----NSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 DT TN +S ++ + GR + + ++ A G+ E K Sbjct: 61 DTKTNYDKWKDSQEKEKRFFIGRKKFNINVSEPENKDPKQLPFAFKGNP---ESKDKVEI 117 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + + I DK + + + + A I Sbjct: 118 IKKLLTVPAGTNIRYIKDKKFEKLRDLLDFKEGTNHTLTNIFHNLEDTKGSEAKLKQISS 177 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIP-----RFEMLIDWGWFYFIAKPMFMLMSYF 353 K + + + I + ++ +P E + + + + +F Sbjct: 178 DKPLELKSKFTLQEGKNEEIIFFVTNVFLPIQFPQYLEWSAFGYLWNVLIVSVGSFLYFF 237 Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF----KQSPPQ 409 + G+ I+LTT+ + L +P+ K T NM IQP+I+++++K+ + Q Sbjct: 238 SYPFASLGLGIILTTILFRTLTWPIYTKTTTFTMNMNLIQPEIEKVKQKYALQSDPASAQ 297 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 +Q ++++Y+ +N + G LQ+P+F +I + + + P + D Sbjct: 298 KMQLEILKVYRKNNFS-FWGFLVSFLQLPLFISINQTLGRFI----VPGGIFETDKLIEK 352 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD---------------- 513 P F F + V + ++ L+MF K+S D Sbjct: 353 PFLGFIKFNQ----PNHWFVVSLLSFLVGLTMFFLNKVSFKKPDYLKKPTHHLTLEQKEK 408 Query: 514 -KGQAMILNWMPVVFVFALSSFPAG---LIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 K + M + + F L +YW N +I Q + K + L+ Sbjct: 409 AKQSEKTMKIMSWFMILMMVLFSCSNPILSLYWIVGNTYTIFQTLITRKNMEKKYFLLKN 468 >gi|332296958|ref|YP_004438880.1| 60 kDa inner membrane insertion protein [Treponema brennaborense DSM 12168] gi|332180061|gb|AEE15749.1| 60 kDa inner membrane insertion protein [Treponema brennaborense DSM 12168] Length = 901 Score = 85.4 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 48/222 (21%), Positives = 90/222 (40%), Gaps = 16/222 (7%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANM 389 + Y + + + F + N GI+++ + V +L PL Q V Sbjct: 5 LYTVIIYPLIQIIEFAFMLFNGVFKNAGISVIGVSFAVSILCLPLYIVAEHWQQVQRDIE 64 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K + P I ++ FK ++ + H I L + +L+QIP F A Y +S Sbjct: 65 KRLDPGISRIKAVFKGDEQYMILSTFYKQNHYHPIMALRSSFGLLIQIPFFIAAYSFLSK 124 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + +IKD+ A D F + + PI M++ + + Sbjct: 125 LPVLAGK-NFLFIKDMGAPDALFSIGTF-----------PINVLPIAMTVINIVAGAIYT 172 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + + M +VF+ L + P+GL++YW+ +N+ S+V Sbjct: 173 KGFKAKDKIQIYGMALVFLVILYNSPSGLVLYWTMNNIFSLV 214 >gi|148377328|ref|YP_001256204.1| putative inner membrane protein translocase component YidC [Mycoplasma agalactiae PG2] gi|148291374|emb|CAL58757.1| Conserved hypothetical protein [Mycoplasma agalactiae PG2] Length = 715 Score = 85.4 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 71/495 (14%), Positives = 159/495 (32%), Gaps = 57/495 (11%) Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 V ++P N+K + NN +S + Sbjct: 222 DKEKNVFKINPENSKLINEGKFTSKLEVNNNRNSTPFLFDKELSYLSFSSKNDFT----- 276 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 F R I ++ S ++ + + + + G + + Sbjct: 277 -GFAKFRRDIL----ETLATNTFYSDKSSYYLKALSQVESKLKEANYSVDYNGFNKYLVD 331 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS-----FHSQFKY 277 + +K E +++ ++ ++++ + + A I + S + Y Sbjct: 332 KIKNKKANELEFAPNVFYALKYYNKALNKYASELNFSALNQISPVKNSVIEEINNLSNDY 391 Query: 278 LSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM----- 332 + + + + T+ L + A + IP Sbjct: 392 NKINDKNSKEAVELKKKITSLNEQLRNTSRLLSPAPYSTMTVKLTDAVNIPYSGDEPQRV 451 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT------------VFVKLLFFPLAK 380 + +W + + +L+ L + ++ + ++ + Sbjct: 452 IHNWSDAWKLGPFYGLLVFPTAWLSAHLSTSLSHLGGWGTIIVILVLTIILRSAMLAVTF 511 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQ-----KAMIQLYKTHNINPLAGCWPILL 435 KQ V+ + + ++ K ++ K+ + + +LYK H INPL +++ Sbjct: 512 KQTVNQSKQEELKSKKAKIDAKYADFKNNKQMKARQQQEVAELYKKHGINPLDAFVTMII 571 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF-------GILPFYLPGFM 488 +PVF +++VI E + + G L+ A+ + F G+L Sbjct: 572 SLPVFIMMWRVIQSLPEFKSTVWLG----LSFAETSWRRLFFSGEWQYLGLLVVVAAVQG 627 Query: 489 HVGIWPIIMSLSMF-----IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 P I++ F ++ + + A++ Q M +VF F F AGL +YW Sbjct: 628 VAQFLPQILNRKKFKERTSLEEEKALKKANRTQR----IMTIVFFFITLIFSAGLQVYWI 683 Query: 544 WSNVISIVQQAVIMK 558 S + +I+Q I K Sbjct: 684 ISGIWTIIQTLSIHK 698 >gi|297824719|ref|XP_002880242.1| hypothetical protein ARALYDRAFT_483801 [Arabidopsis lyrata subsp. lyrata] gi|297326081|gb|EFH56501.1| hypothetical protein ARALYDRAFT_483801 [Arabidopsis lyrata subsp. lyrata] Length = 434 Score = 85.0 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 93/239 (38%), Gaps = 40/239 (16%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E+ I F + L+ ++ G N+ +I LTTV ++ + P+ Q +T + Sbjct: 127 EVAIAAADSAFPVAALQHLIDGVHSFTGLNWWASIALTTVLIRGVTIPILLNQLKATYKL 186 Query: 390 KNIQPKIDELRE----KFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIY 444 ++P+++ELR+ K + + +QL +K H + P +++Q P+F + + Sbjct: 187 NVLRPQLEELRQEMSTKAQDPEAMAEGQRRMQLLFKEHGVTPFTPLKGLIIQGPIFISFF 246 Query: 445 KVISISLEMRHAPFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 I E P + W DL AD T I P++ ++ Sbjct: 247 FAIRNMAE--KVPSFKTGGTLWFTDLTTADTTY-------------------ILPLLTAV 285 Query: 500 SMFIQMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAG----LIIYWSWSNVISIV 551 + I ++ + + A + + F G L YW SN+ ++V Sbjct: 286 TFLIMVESNMQEGLEGNPV-AGTMKKFSRIIAFLSIPVLIGIEKALFCYWLTSNLFTLV 343 >gi|126652600|ref|ZP_01724764.1| OxaA-like protein precursor [Bacillus sp. B14905] gi|126590591|gb|EAZ84708.1| OxaA-like protein precursor [Bacillus sp. B14905] Length = 210 Score = 85.0 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 99/230 (43%), Gaps = 32/230 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ---- 393 F F+ +P+ + + ++ G++ I ++ T+ V+ + PL K + K++ Sbjct: 1 MFTFLTQPIIYFIHFIHSFTGSYAIGVISITIAVRAILMPLFIKSAKHQKHSKDLMTSIK 60 Query: 394 ----PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +L+ +S ++Q+ + +L + L GC PI++Q+PV F++Y I I Sbjct: 61 PELDVLTAKLKNSHDESEKIMVQQKIQELTSDSLKSSLLGCLPIIIQLPVLFSLYYAIKI 120 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + W+ G + +GI II + F+Q +S Sbjct: 121 DTVIASE-NFLWMN---------------------LGTVDIGI-SIIACVIYFMQSWLSL 157 Query: 510 PPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 I+ ++ P++ + PA + IYW+ S ++ VQQ +I K Sbjct: 158 DKNQPINMKIMMFINPIMILIFSLFNPAIIPIYWTVSALLLTVQQLIIKK 207 >gi|29831751|ref|NP_826385.1| hypothetical protein SAV_5208 [Streptomyces avermitilis MA-4680] gi|29608868|dbj|BAC72920.1| putative membrane protein [Streptomyces avermitilis MA-4680] Length = 243 Score = 85.0 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 17/202 (8%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T V+LL PL++ +QP++ ELR+K ++P + LQKA+++L+ Sbjct: 28 IVLFTALVRLLVHPLSRASARGQRARARLQPQVAELRKKHGKNPEK-LQKALLELHAEEK 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG-ILPF 482 ++PL+GC P L Q+P FF +Y + S + A G PF Sbjct: 87 VSPLSGCLPGLFQLPAFFLLYHLFSNTTIGGEGNELLTHTLFTAPLGDRWADALGDGGPF 146 Query: 483 YLPGFMHVGIWPIIMSLSMF------IQMKMSPPP-ADKGQA-----MILNWMPVVFVFA 530 G +++G++ I+ +++ F M +P P D Q I +MP++ F Sbjct: 147 GTQGLVYLGLFAIVAAVATFNYRRTKRTMAANPLPVGDGEQQVPGLGAINRFMPLMSFFT 206 Query: 531 LSS---FPAGLIIYWSWSNVIS 549 L + P +Y S S Sbjct: 207 LFTVAFVPLAAALYVVTSTTWS 228 >gi|270308300|ref|YP_003330358.1| preprotein translocase YidC subunit [Dehalococcoides sp. VS] gi|270154192|gb|ACZ62030.1| preprotein translocase YidC subunit [Dehalococcoides sp. VS] Length = 315 Score = 85.0 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 8/223 (3%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 ++ + ++ +NL G+FG+ +++ TV ++L +PL +KQ +T M+ I ++ L+ Sbjct: 11 ILSPMINGMVWLSHNLWGSFGLTVIVLTVVIRLALWPLNRKQLTATKKMQEITVHMEALK 70 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 +K Q L + ++LYK ++P P+L+Q P++ A+Y+ I L + F Sbjct: 71 KKHGN-DRQKLAEEQMKLYKESGVSPTGCLVPMLIQFPIWIALYQAIVRVLAVTPEDFMN 129 Query: 461 WIKDL-AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-----DK 514 L + L + +++ +SM++Q KMS P A Sbjct: 130 LADHLYSWPVVYQTLPLSNHFLWMDLSLPDF-ALALLVGVSMYVQQKMSTPKAINQQQAA 188 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M+ MP +F F SFP+GL YW S ++ I+ Q I Sbjct: 189 QGQMMSFMMPFMFFFFSLSFPSGLAFYWFVSAIVGIIMQYFIT 231 >gi|326793318|ref|YP_004311139.1| membrane protein insertase, YidC/Oxa1 family [Clostridium lentocellum DSM 5427] gi|326544082|gb|ADZ85941.1| membrane protein insertase, YidC/Oxa1 family [Clostridium lentocellum DSM 5427] Length = 394 Score = 84.7 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 27/138 (19%) Query: 471 TNIFTLFGILPFYLPGFMH-----VGIWPIIMSLSMFIQMKMSPP--------------- 510 +I G P + V + PII S +I K++ Sbjct: 208 YSIENFLGFNVVDTPSVLMSTQWWVILIPIIAGASTYIFTKLTMAANGQVQSAAATSNNG 267 Query: 511 ---PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK---MHGAEI 564 P + + MP++ + P GL +YW NVI + QQ ++ K A++ Sbjct: 268 AANPGESMMKTMNIVMPIMTGVFAYTMPIGLALYWIAGNVIMMGQQWIVNKILEKQDAKL 327 Query: 565 GL-IDRLRSTFSKNYNSQ 581 +++ R KN Q Sbjct: 328 DAQLEKEREEARKNNKIQ 345 Score = 43.8 bits (101), Expect = 0.078, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 4/94 (4%) Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMI 416 GI+I+L T+ ++L PL ++ M IQP++ +++ K+K Q + M Sbjct: 29 GISIILFTLVARILLTPLQLSSQRTSRGMSKIQPEMQKIQNKYKGKKDQESQLKQSQEMQ 88 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 LYK + INP AGC P+L+Q+P+ A++ V+ Sbjct: 89 ALYKKYKINPFAGCLPLLIQLPLIMALFNVLREP 122 >gi|197302264|ref|ZP_03167323.1| hypothetical protein RUMLAC_00991 [Ruminococcus lactaris ATCC 29176] gi|197298695|gb|EDY33236.1| hypothetical protein RUMLAC_00991 [Ruminococcus lactaris ATCC 29176] Length = 443 Score = 84.7 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 9/111 (8%) Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-----DKG---QAMILNWMPVVFVFA 530 + + G + + P++ L+ FI +K+ P A + + MP++ V Sbjct: 245 LHNGSIVGVILAVLIPVLAGLTQFISVKLQPNAASADKDNPMAGSMNAMTYTMPLISVVM 304 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + PAGL +YW+ S ++ +QQ I K + L + + K + Sbjct: 305 GFTLPAGLGLYWAASAIVRCIQQLAINKYLSTK-SLDEMIAENQKKAQKKR 354 Score = 54.2 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 62/123 (50%), Gaps = 5/123 (4%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + I + + + M + + + + N G+ I++ T+ V L PL KQ + Sbjct: 13 DWPIIKQIAWLLGQVMNGIFNVLSAIGIENIGVCIIIFTIIVYTLMIPLTIKQQKFSKMS 72 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 +QP+I ++++K++ Q Q+ + +Y+ + + GC P+L+Q+P+ FA+Y Sbjct: 73 AVMQPEIKKIQKKYEGKKDQASMMKQQEEINMVYEKYGTSMSGGCLPMLIQMPILFALYP 132 Query: 446 VIS 448 VI Sbjct: 133 VIR 135 >gi|227506191|ref|ZP_03936240.1| inner membrane protein translocase component YidC [Corynebacterium striatum ATCC 6940] gi|227197215|gb|EEI77263.1| inner membrane protein translocase component YidC [Corynebacterium striatum ATCC 6940] Length = 330 Score = 84.7 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 60/311 (19%), Positives = 113/311 (36%), Gaps = 68/311 (21%) Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ +++ L+ + ++I+L T +K + Q S+ Sbjct: 1 MLNFIYWPISAVLWFWHWLLSFVMDPAQGITWILSIVLLTWTLKAVMVKPTITQLRSSRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ IQP+I ELR K+ + + M ++YK + P+AGC P+L QIP+F ++ V+ Sbjct: 61 MQEIQPQIQELRTKYANDQTKA-AQEMQRIYKESGVRPMAGCLPVLAQIPMFIGLFHVLR 119 Query: 449 -------ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-------P 494 ++ + H D A IF + F V + P Sbjct: 120 SFDRTVQVAGGIGHPAGEPMSVDANANTANYIFKPELVQQFLDAKIFGVPLIANLRVNSP 179 Query: 495 II--MSLSM------------------FIQMKMS-----------------PPPADKGQA 517 I+ ++M +MS A+ Q Sbjct: 180 ILDQQGITMSQAAVIIVPLIVIIAVLTHFNARMSLNRQEARRASGKTAAPQGQNAEMMQQ 239 Query: 518 ------MILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 ++ W MP + VF+ + +P GL+ Y + V + Q ++ K E Sbjct: 240 QMAIMNKMMLWVMPGMLVFSGAIWPIGLLFYMLANTVWTFFQTRIVYKKMDEEEERELAA 299 Query: 571 RSTFSKNYNSQ 581 ++ + + Sbjct: 300 KAELKRTSAPK 310 >gi|218134370|ref|ZP_03463174.1| hypothetical protein BACPEC_02264 [Bacteroides pectinophilus ATCC 43243] gi|217989755|gb|EEC55766.1| hypothetical protein BACPEC_02264 [Bacteroides pectinophilus ATCC 43243] Length = 265 Score = 84.7 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 15/125 (12%) Query: 471 TNIFTLFGILPFYLPGFMHVGI---WPIIMSLSMFIQMKMSPP-----------PADKGQ 516 N F + + +G+ PI+ ++ ++ ++M PA Sbjct: 61 FNHMNSFLTINMSQNPGLTLGLPILIPILAGVTQYLSVRMMQTQNPATGNNEDNPAAASM 120 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 M+ MP++ S PAGL +YWS + V I+QQ +I K + G+ + ++ K Sbjct: 121 KMMNTVMPIMSAVMAISLPAGLGLYWSATAVFQILQQFIINKYFDKK-GVDEIVKENVDK 179 Query: 577 NYNSQ 581 + Sbjct: 180 INKKR 184 >gi|326803748|ref|YP_004321566.1| membrane protein insertase, YidC/Oxa1 family [Aerococcus urinae ACS-120-V-Col10a] gi|326651023|gb|AEA01206.1| membrane protein insertase, YidC/Oxa1 family [Aerococcus urinae ACS-120-V-Col10a] Length = 308 Score = 84.3 bits (206), Expect = 5e-14, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 35/214 (16%) Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPL--A 428 + + T + QP + + +E + + Q K +NI+ Sbjct: 77 TYKQQTSSILGTEKRRYYQPYLMKFQELIQGAETPEEQMEYTRQQQAFMKDNNISLFGNM 136 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC+P+L+Q+P+ +Y I N + F Sbjct: 137 GCFPLLIQLPILSGMYVAI-----------------------YNNQNIANYNFFGFSLGE 173 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADK----GQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 + II L F+Q ++S + Q + +MP++ F + + PA + +Y Sbjct: 174 PNLVLTIIFILLSFLQTRISMQTMPEEVREQQGKSMLFMPLMLGFVVFNVPAAIGLYLVT 233 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 + + ++QQ I + ++ + N Sbjct: 234 TTIWGMLQQLAIN--TFVHPRIKAKVENEMKDNP 265 >gi|227534826|ref|ZP_03964875.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|301066722|ref|YP_003788745.1| preprotein translocase subunit YidC [Lactobacillus casei str. Zhang] gi|227187582|gb|EEI67649.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|300439129|gb|ADK18895.1| Preprotein translocase subunit YidC [Lactobacillus casei str. Zhang] Length = 332 Score = 84.3 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 42/260 (16%) Query: 337 GWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 ++ I P+ LM + +LV ++GIAI++ T+ V+L+ PL +Q Sbjct: 43 TFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQEKQ 102 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKT------HNINPLAGCWPILLQIPVFFAI 443 K IQP++ ++E K++ Q AM + ++ P GC P+L+Q+P+F + Sbjct: 103 KIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFSGL 162 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y+ I+ S E+ A F+G + I T+ LP+ + + + P Sbjct: 163 YQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPYIVVSLIMLQGVP--------- 209 Query: 504 QMKMSPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q + ++ P++ + AGL +Y+ +I I+QQA++ Sbjct: 210 ----------PEQRKAMQTTAFLNPIMTFVFCMMYNAGLGLYFGAGGIILIIQQAIVT-- 257 Query: 560 HGAEIGLIDRLRSTFSKNYN 579 + + R+ + +N Sbjct: 258 YVVTPNIRKRMDAEMEENPP 277 >gi|73662102|ref|YP_300883.1| preprotein translocase subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82593014|sp|Q49Z38|OXAA_STAS1 RecName: Full=Membrane protein oxaA; Flags: Precursor gi|72494617|dbj|BAE17938.1| putative preprotein translocase subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 289 Score = 83.9 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 105/270 (38%), Gaps = 31/270 (11%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYN--LVGNFGIAIMLTTVFVKLLFFPLAKK 381 D + P + FY + + +N + +++ + + K Sbjct: 21 DYSKPENRDGFFYNTFYVPMDNVIHWLGTSFNNDYGLAIVVLVLVIRIVLLPFMLSNYKN 80 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLA---GCWPIL 434 ++ MK +P ID ++EK K+S Q + M+++YK +++NP+ GC PIL Sbjct: 81 SHMMREKMKVAKPDIDAIQEKVKRSRTQEEKMAANSEMMEVYKKYDMNPMKSMLGCLPIL 140 Query: 435 LQIPVFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +Q+P+ ++ V+ S P++ W +LA D I Sbjct: 141 IQMPIIMGLFFVLKYPSSGGFTEHPYFLWF-NLAKPD-----------------IWITII 182 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 I+ L ++ K P + M++ P++ V+ S + L +YWS S IVQ Sbjct: 183 AGILYFLQAYVSSKSMPAEQRQMGYMMMVISPIMIVWISFSSVSALGLYWSVSAAFLIVQ 242 Query: 553 QAVIMKMHG--AEIGLIDRLRSTFSKNYNS 580 V + A+ + + + + Sbjct: 243 TQVANMYYSKLAQREVAPMIEAMEKNKAEA 272 >gi|191638667|ref|YP_001987833.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23] gi|190712969|emb|CAQ66975.1| Membrane protein chaperone oxaA [Lactobacillus casei BL23] gi|327382708|gb|AEA54184.1| Membrane protein oxaA 2 [Lactobacillus casei LC2W] gi|327385895|gb|AEA57369.1| Membrane protein oxaA 2 [Lactobacillus casei BD-II] Length = 332 Score = 83.9 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 42/260 (16%) Query: 337 GWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 ++ I P+ LM + +LV ++GIAI++ T+ V+L+ PL +Q Sbjct: 43 TFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQEKQ 102 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKT------HNINPLAGCWPILLQIPVFFAI 443 K IQP++ ++E K++ Q AM + ++ P GC P+L+Q+P+F + Sbjct: 103 KIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFSGL 162 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y+ I+ S E+ A F+G + I T+ LP+ + + + P Sbjct: 163 YQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPYIVVSLIMLQGVP--------- 209 Query: 504 QMKMSPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q + ++ P++ + AGL +Y+ +I I+QQA++ Sbjct: 210 ----------PEQRKAMQTTAFLNPIMTFVFCMMYNAGLGLYFGAGGIILIIQQAIVT-- 257 Query: 560 HGAEIGLIDRLRSTFSKNYN 579 + + R+ + +N Sbjct: 258 YVVTPNIRKRMDAEMEENPP 277 >gi|320581780|gb|EFW95999.1| Mitochondrial inner membrane insertase [Pichia angusta DL-1] Length = 364 Score = 83.9 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 74/233 (31%), Gaps = 27/233 (11%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF--------VKLLFFPLAKKQY 383 + ++ + + + + G A + T + + + Sbjct: 71 KSVGLSDGWWPSDLIQTTLEAVHVTTGLPWWATIAATTLGIRFALLPLFMASSDAMARSQ 130 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ----IPV 439 + K ++ +++ + + Q+ + + +L K + + +Q I Sbjct: 131 AAAPETKVLRKELNSAMARGDRMTQQLKMQEIKKLNKKYGVKYSRMFLSPGIQLTYGIGS 190 Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 FF I ++ ++ ++ W DL A DP L + ++ Sbjct: 191 FFGIREMANLPVQGFENQGLYWFNDLTAPDPYIGLQLISACLYAASFRFGGE-----TAV 245 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 S F +P + + + A +++Y++ + + SI+Q Sbjct: 246 SQF----------GPKTQKAFMALPFLSIVFTWNMSAAVLVYFTANGLFSIIQ 288 >gi|325478864|gb|EGC81974.1| membrane protein insertase, YidC/Oxa1 family [Anaerococcus prevotii ACS-065-V-Col13] Length = 232 Score = 83.9 bits (205), Expect = 8e-14, Method: Composition-based stats. Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 35/222 (15%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + IAI+L T+ V L+ P+ Q K +PK++E+++K+ Q++Q+ M QLY Sbjct: 21 YAIAIILMTLLVSLMIIPMTISQQKQAERTKVFKPKMEEIQKKY-GYDQQIMQQKMQQLY 79 Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISISLEM-------RHAPFWGWIKDLAAADPT 471 K + P ++GC +++QI V F +++++S + + + WI L DP Sbjct: 80 KEEGVTPGISGCLVMIIQILVLFGLFRMMSDTTKYVFPEGLDNVKTNFYWIPTLLDKDPY 139 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--------MILNWM 523 P++ SLS F S + Q + M Sbjct: 140 WFG------------------LPLLTSLSQFAVQLFSMKTNPQMQQGGAMGGMNNMFLLM 181 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P+++ F PAGL +Y++ S++ +V ++ + Sbjct: 182 PLMYFFVFRGLPAGLPLYYTLSSLFRLVIMVIMHFAMRNKKE 223 >gi|289826409|ref|ZP_06545521.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 63 Score = 83.9 bits (205), Expect = 8e-14, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 31/48 (64%) Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D Q I+ +MPV+F FP+GL++Y+ SN+++I+QQ +I + Sbjct: 1 MTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYR 48 >gi|25029343|ref|NP_739397.1| putative inner membrane protein translocase component YidC [Corynebacterium efficiens YS-314] gi|259505655|ref|ZP_05748557.1| membrane protein OxaA [Corynebacterium efficiens YS-314] gi|38503027|sp|Q8FLS3|OXAA_COREF RecName: Full=Membrane protein oxaA gi|23494631|dbj|BAC19597.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259166737|gb|EEW51291.1| membrane protein OxaA [Corynebacterium efficiens YS-314] Length = 397 Score = 83.5 bits (204), Expect = 8e-14, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 95/254 (37%), Gaps = 45/254 (17%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK----IDELREKFKQSPPQVLQKAM 415 + I++ + V+ + P K Y S I+PK +E + + + + +Q+ Sbjct: 32 WFISLFGLVITVRAIIAPFTWKMYKSGRLTAQIRPKRVAIAEEFKGRHDEDSIREMQQKY 91 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA---PFWGWIKDLAAAD--- 469 L K + INP AGC P L+QIPV +Y+V+ + P I L+A + Sbjct: 92 KDLNKEYGINPFAGCVPTLIQIPVILGLYQVLLLMARPEGGLENPVPRSIGFLSAEEVQS 151 Query: 470 -----------------PTNIFTLFG-----ILPFYLPGFMHVGIWPII-MSLSMF--IQ 504 P T G +L F LP F+ ++ M+LS + IQ Sbjct: 152 FLQGRVFNVPLPAYVTMPAEQLTFLGTTREDVLSFVLPLFIVAAVFTAFNMALSTYRNIQ 211 Query: 505 MKMSPPPADKGQAMILNWM----PVVFVFALSS--FPAGLIIYWSWSNVISIVQQ----A 554 G W+ P+ + + FP + +YW +N+ + Q Sbjct: 212 TNDYASNISNGMFKAFLWLAVLAPLFPLVLGLTGPFPTAIALYWVANNLWTFGQTAIMHY 271 Query: 555 VIMKMHGAEIGLID 568 +I + + + Sbjct: 272 IIERNYPLTEEFKE 285 >gi|85057752|ref|YP_456668.1| 60 kDa inner membrane protein [Aster yellows witches'-broom phytoplasma AYWB] gi|84789857|gb|ABC65589.1| 60 kDa inner membrane protein [Aster yellows witches'-broom phytoplasma AYWB] Length = 513 Score = 83.5 bits (204), Expect = 9e-14, Method: Composition-based stats. Identities = 79/483 (16%), Positives = 158/483 (32%), Gaps = 42/483 (8%) Query: 106 PIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANN 165 V + S YF +D ++ V N +I T Sbjct: 39 DKVVVFKNSEKHKKYFDPVDSSKLLSDYADIFVVYVINDKKKEIQISTQDEFKGMLAKKK 98 Query: 166 ILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 + + + + ++ + + + + A Sbjct: 99 EAKYFFSLIKKPDPKLKDEFNFSKLDNKEEYFLTFKTDKETTEFKNKLMKDFLTVAAGTN 158 Query: 226 DKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 D + KY E F + +S S+K + K +++ + + Sbjct: 159 DDYIENNKYQKKELRDALEFQKIDS----SNKLISVSLENIKLEDDYAENIKNTSNNVLS 214 Query: 286 QAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + N ++P K T + + + I ++F Sbjct: 215 KINVRFNNGRLMPRKLFITNFS--VPIQFTSRLEWSLFGYFWNILIISIGSFLYFFSTFL 272 Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 ++ GN G+ I+L TVF++ L +P+ K + NM IQ +I+++++K+ Sbjct: 273 VYGA---SGMFFGNLGLGIVLATVFIRTLTWPIYTKTSTLSMNMSLIQSEIEKVKQKYAI 329 Query: 406 SPP----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGW 461 Q +Q ++++Y+ +N + G LQ+P+F AI + +S + P + Sbjct: 330 KKDLASAQKMQLEILKVYRKNNFS-FWGFLLSFLQLPLFIAINQTLSRFI----IPGGIF 384 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-------- 513 D P L + P + + ++ +MFI K+S D Sbjct: 385 ATDKLIEKP--FLGLINLKPSNPNNAFVIFLLSFLVGATMFILNKISFKKPDYLKTPSYH 442 Query: 514 ----KGQA--------MIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 + Q I+ +M ++ VF S P L +YW N +I Q + K Sbjct: 443 LTSEQKQKAKQSEKSIKIMSVFMILMMVFFSRSNPI-LSLYWIVGNTYTIFQTLLTRKKI 501 Query: 561 GAE 563 + Sbjct: 502 QKK 504 >gi|70984948|ref|XP_747980.1| mitochondrial export translocase Oxa1 [Aspergillus fumigatus Af293] gi|66845608|gb|EAL85942.1| mitochondrial export translocase Oxa1, putative [Aspergillus fumigatus Af293] Length = 436 Score = 83.5 bits (204), Expect = 9e-14, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 89/243 (36%), Gaps = 38/243 (15%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + + + + + + + G A ++ T + ++L ++ M Sbjct: 51 KNLGLDYGWGPSSIIQFFIEHIHIWGGLPWWASVVGTGILLRLALLYPTLGAVDTSTKML 110 Query: 391 NIQPKIDELREKF-------KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 NI+P + LR++ Q L+ + +L++ I P+L QIP F Sbjct: 111 NIKPVTEPLRQQMIMRGKEGNQIEMLKLRAEIQKLHQEQGIVAWKSFIPML-QIPFGFGC 169 Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 Y+V+ + W+KDL ADP I P +L Sbjct: 170 YRVVKGMAALPVPGLTLESVAWLKDLTVADPYF-------------------ILPAASAL 210 Query: 500 SMFIQMKM------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M++ ++ + +++ +P + ++ FP+ L +Y+ + + + Q Sbjct: 211 FMYLSIRKGGENGVNQLQGTALGRLLMFGLPALSFLFMAFFPSALQLYFVTTGLFGLGQA 270 Query: 554 AVI 556 ++ Sbjct: 271 YLL 273 >gi|313112535|ref|ZP_07798200.1| inner membrane protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310625135|gb|EFQ08425.1| inner membrane protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 219 Score = 83.5 bits (204), Expect = 9e-14, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 48/117 (41%), Gaps = 7/117 (5%) Query: 471 TNIFTLFGILPFYLP--GFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMI---LNWMP 524 + GI +P G + P++ ++M + +S + Q + + MP Sbjct: 42 SQHMNFLGIDLTRIPKLGLSLDIVLPLLSVITMLLSTHISMKASGQQMQGSMKLTMYMMP 101 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 ++++F ++P +Y+ SN++ VQ +M+ + + + ++ + Sbjct: 102 LMYLFFCFTYPLAFSLYYVISNIVMTVQTQ-VMRKVYDPDKMRKEIEAQIAEKKKQE 157 >gi|162448266|ref|YP_001621398.1| integral membrane protein [Acholeplasma laidlawii PG-8A] gi|161986373|gb|ABX82022.1| integral membrane protein [Acholeplasma laidlawii PG-8A] Length = 491 Score = 83.5 bits (204), Expect = 9e-14, Method: Composition-based stats. Identities = 81/485 (16%), Positives = 157/485 (32%), Gaps = 52/485 (10%) Query: 103 SNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKN 162 S I T LSP+ + + N S ++ +T + V Sbjct: 23 DTSEIDTFLSPNKIVYTMDETNANGPIIETGDFEFYSIQKNKTSSRVDVASTEVTSVSLG 82 Query: 163 ANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIA 222 N Y+++ T ++ + I S + F Sbjct: 83 NNIYEITVRGHKYNVYVYQTGYEGTVSNPNDIVVSALSPTYGVENDADKIKNVNALFFTV 142 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + L + + + ++ +N + KY A+ P Y + Sbjct: 143 ITNQIDLEKVQVISAQFNTKANTEVIKETGANAQKYLAT---PEN---------YEDNVF 190 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 + E L N + A I+ ++ + W W + I Sbjct: 191 KINSNNVLSFEFHDLNDTVQVIKNLSYKPADNQLPINTKMENT-----WLGYVWDWVFII 245 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 M + +FG+ I+ T+ V+ + +P+ K + M QP++ +L+ K Sbjct: 246 PISFLMQFFASLFGLNSFGLGILFATIIVRTIAWPIYAKANDMSIKMAVAQPELTKLQNK 305 Query: 403 FKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + Q+ M LYK H I+ L GC+ +LQ+P+F A+++ + P Sbjct: 306 YALKKDPASQQKMQMEMMQLYKKHGISVL-GCFTPILQMPIFLAMFQTVYRIT----VPG 360 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSP------- 509 + ++ N LFG++ GF + + I+ ++M++ +S Sbjct: 361 GMYAANVN-----NHKILFGLIDLSAGGFNDVTSYVLAAIVGVTMWLLQHLSQKKPSYAK 415 Query: 510 -------PPADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + QA + M + V + L YW N+ SI Q I + Sbjct: 416 NTGTQVKTEQAEQQAKTMKTVSNVMIGMMVLTTITSVNALGFYWIIGNLFSIGQS-FINR 474 Query: 559 MHGAE 563 + Sbjct: 475 KLSEK 479 >gi|299537937|ref|ZP_07051223.1| membrane protein oxaA 2 precursor [Lysinibacillus fusiformis ZC1] gi|298726519|gb|EFI67108.1| membrane protein oxaA 2 precursor [Lysinibacillus fusiformis ZC1] Length = 210 Score = 83.5 bits (204), Expect = 9e-14, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 102/230 (44%), Gaps = 32/230 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ---- 393 F+A+P+ L+ + ++ G++ ++++ T+ V+L+ PL + + K + Sbjct: 1 MLTFLAQPIINLIHFIHSFTGSYALSVIAITIAVRLILMPLFIRSAKHQKHSKELMTTIK 60 Query: 394 ----PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 D+ + +S +++Q+ + +L + L GC PIL+Q+P+ F++Y I + Sbjct: 61 PELDALTDKYKNSQSESEKRMVQQQIQELTSASLKSSLLGCLPILIQLPILFSLYYAIKL 120 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 DL A ++ G + + I L FIQ ++ Sbjct: 121 --------------DLVIASENFLWMNLGTIDIGVSM---------IACLIYFIQSCIAL 157 Query: 510 PPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + I+ ++ P++ + PA + IYW+ S ++ IVQQ +I K Sbjct: 158 EKSQPLNMKIMVFINPIMILIFSLFNPAIIPIYWTVSALLLIVQQLIIKK 207 >gi|302207207|gb|ADL11549.1| Inner membrane protein translocase component YidC [Corynebacterium pseudotuberculosis C231] gi|302331768|gb|ADL21962.1| Inner membrane protein translocase component YidC [Corynebacterium pseudotuberculosis 1002] gi|308277460|gb|ADO27359.1| Inner membrane protein translocase component YidC [Corynebacterium pseudotuberculosis I19] Length = 318 Score = 83.5 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 106/283 (37%), Gaps = 62/283 (21%) Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ +++ +V ++ +AIML T ++ Q S Sbjct: 1 MLNFIYWPISAILWFWHKVVSFVFDPGSGISWVLAIMLLTFTIRAFLVKPMLNQMRSARK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP + E+R+K+ Q + ++ K +NP+AGC P L+Q+PVF ++ V+ Sbjct: 61 MQELQPLMQEIRKKY-GKDQQKMMAETRKVQKEVGVNPIAGCLPALVQMPVFIGLFHVLR 119 Query: 449 I-------------SLEM-RHAP-FWGWIKDLAAADPTNIFTLFGILPFYLPG------- 486 S+E+ R P + +D+ + IF + +P Sbjct: 120 SFNRTGTGHSQLGLSVEVNRETPNYIFSAEDVQSFLDARIFGVPLSSYISMPADMYKAFQ 179 Query: 487 ---------FMHVGIWPIIMSLSMFIQMKMS---------------------PPPADKGQ 516 +I+ ++ + ++S D Sbjct: 180 PVDFTRVNIIAVAAPLILIIVVATHMNGRLSVNRQKARRESGLQAAPTSGQMQMQMDLMN 239 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 M+L +MP+ +F + GL+ Y +N+ + QQ I Sbjct: 240 KMMLWFMPLTILFTGVLWHLGLLFYMVANNIWTFFQQRWIFNK 282 >gi|317488566|ref|ZP_07947111.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp. 1_3_56FAA] gi|316912308|gb|EFV33872.1| YidC/Oxa1 family membrane protein insertase [Eggerthella sp. 1_3_56FAA] Length = 663 Score = 83.5 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 29/231 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +A+ ++ Y+L G++ +AI+L TV +K++ PL+ ++ M I P+++ Sbjct: 1 MLEALARLFSYIVQPCYDLTGSWWMAILLFTVIIKIVLMPLSLWCQWNSIVMVKIMPELN 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ++ K+ + +K + L K H+ +PL P+ QI V F + +VI Sbjct: 61 RIKVKYFGDAETIGEKQTL-LNKKHHYHPLLSLIPLAAQILVLFGLVEVIHG-------- 111 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPP-- 511 I D A + G++P G I P++ LS F Q +++P Sbjct: 112 ----ITDHGAPGTEFL----GMVPIEDGGLSW--IMPLLAGLSAVVMGFAQNRINPLQRE 161 Query: 512 ADKGQAMILNWMPVVF-VFALSSFPAGLIIYWSWSNVISIVQQA---VIMK 558 K + N + +V + AG+ YW SN+++IV QA +IM+ Sbjct: 162 QSKMEKNTTNGLSIVLSLVLGVYVAAGMAFYWICSNLMAIVVQALCNLIMR 212 >gi|239632040|ref|ZP_04675071.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526505|gb|EEQ65506.1| preprotein translocase subunit YidC [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 320 Score = 83.5 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 42/260 (16%) Query: 337 GWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 ++ I P+ LM + +LV ++GIAI++ T+ V+L+ PL +Q Sbjct: 31 TFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQEKQ 90 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKT------HNINPLAGCWPILLQIPVFFAI 443 K IQP++ ++E K++ Q AM + ++ P GC P+L+Q+P+F + Sbjct: 91 KIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFSGL 150 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y+ I+ S E+ A F+G + I T+ LP+ + + + P Sbjct: 151 YQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPYIVVSLIMLQGVP--------- 197 Query: 504 QMKMSPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q + ++ P++ + AGL +Y+ +I I+QQA++ Sbjct: 198 ----------PEQRKAMQTTAFLNPIMTFVFCMMYNAGLGLYFGAGGIILIIQQAIVT-- 245 Query: 560 HGAEIGLIDRLRSTFSKNYN 579 + + R+ + +N Sbjct: 246 YVVTPNIRKRMDAEMEENPP 265 >gi|27468926|ref|NP_765563.1| lipoprotein precursor [Staphylococcus epidermidis ATCC 12228] gi|57865393|ref|YP_189577.1| hypothetical protein SERP2021 [Staphylococcus epidermidis RP62A] gi|251811869|ref|ZP_04826342.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis BCM-HMP0060] gi|282875157|ref|ZP_06284030.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis SK135] gi|293367134|ref|ZP_06613805.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|38502987|sp|Q8CMK4|OXAA1_STAES RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|81673373|sp|Q5HLG6|OXAA1_STAEQ RecName: Full=Membrane protein oxaA 1; Flags: Precursor gi|27316474|gb|AAO05649.1|AE016750_254 lipoprotein precursor [Staphylococcus epidermidis ATCC 12228] gi|57636051|gb|AAW52839.1| membrane protein, putative [Staphylococcus epidermidis RP62A] gi|251804666|gb|EES57323.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis BCM-HMP0060] gi|281295922|gb|EFA88443.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis SK135] gi|291318695|gb|EFE59070.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|329734603|gb|EGG70914.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU045] gi|329735021|gb|EGG71318.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU028] Length = 278 Score = 83.5 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 100/270 (37%), Gaps = 43/270 (15%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E ++ K M + + N+G AI+ + V+ + P Q + M Sbjct: 24 EENQTGIFYNVFVKSMDGFLHFLGRVFQDNYGFAIISIVLIVRFILLPFMLIQVKNMHMM 83 Query: 390 KNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIP 438 + + ++ Q + +++ Y+++ INP + GC P+L+Q+P Sbjct: 84 REKTKVVQPELDAIRDKMKHATSQEERNAANQLLMKKYQSYGINPLKNMLGCLPVLIQMP 143 Query: 439 VFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 + +Y + S + P + W DL D I II Sbjct: 144 ILMGLYMSLKYPSSHGITEYPHFLWF-DLTQPD---------------------LIMTII 181 Query: 497 MSLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ F+Q ++ K Q ++ + P+ +A A L +YWS S IVQ Sbjct: 182 AAIMYFVQPLVNSIHYPKDQRKTYYFMMVFSPIFITYASLHSAAALGLYWSISAAFLIVQ 241 Query: 553 QAVIMKMHGAEIGLID--RLRSTFSKNYNS 580 H ++ L + +L+ +N ++ Sbjct: 242 MHF-AHSHYKKVALHEAKKLKQKLEQNKDN 270 >gi|255505832|ref|ZP_05348364.3| membrane protein OxaA [Bryantella formatexigens DSM 14469] gi|255265692|gb|EET58897.1| membrane protein OxaA [Bryantella formatexigens DSM 14469] Length = 427 Score = 83.1 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 15/153 (9%) Query: 440 FFAIYKVISISLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 F I VI+ + E +RH ++ I AD G + PI+ Sbjct: 200 FPGIADVINSTAENVRHINYFLGIN---IADSPMSIIQTGWSEKDFLAIIVALAIPILAG 256 Query: 499 LSMFIQMKMSPPPADKGQ----------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 L+ F+ K++P + + MP++ VF +F G+ IYW +V+ Sbjct: 257 LTQFLSTKLTPQQSSNTGTEENTMTSSLKTMNTIMPLMSVFFCFTFSVGIGIYWVAGSVV 316 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 V Q ++ + ++I + + ++ K + Sbjct: 317 RCVIQVIVNR-QVSKIDVDELVKKNLEKYNEKR 348 Score = 52.7 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 5/122 (4%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F + FI +++ + + N GI I+L TV V LL P+ K S+ M Sbjct: 9 FIIGPFATVLGFIMNGIYLFLDGALG-IQNIGICIILFTVIVNLLLLPMTIKTQKSSKMM 67 Query: 390 KNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + P+I L++K+K Q + + LY + I+ C P+L+Q P+ A+Y+ Sbjct: 68 QVANPEIQALQKKYKNKTDQASQMKMYEEQQALYAKYGISMSGQCLPLLIQFPILLAMYQ 127 Query: 446 VI 447 VI Sbjct: 128 VI 129 >gi|300859524|ref|YP_003784507.1| hypothetical protein cpfrc_02107 [Corynebacterium pseudotuberculosis FRC41] gi|300686978|gb|ADK29900.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] Length = 318 Score = 83.1 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 111/283 (39%), Gaps = 62/283 (21%) Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ +++ +V ++ +AIML T ++ Q S Sbjct: 1 MLNFIYWPISAILWFWHKVVSFVFDPGSGISWVLAIMLLTFTIRAFLVKPMLNQMRSARK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP + E+R+K+ Q + ++ K +NP+AGC P L+Q+PVF ++ V+ Sbjct: 61 MQELQPLMQEIRKKY-GKDQQKMMAETRKVQKEVGVNPIAGCLPALVQMPVFIGLFHVLR 119 Query: 449 I-------------SLEM-RHAPFWGWIKD--------------LAAA--DPTNIFTLFG 478 S+E+ R P + + + L++ P +++ F Sbjct: 120 SFNRTGTGHSQLGLSVEVNRETPNYIFSAEDVQSFLDARIFGVPLSSYISMPADMYKAFQ 179 Query: 479 ILPFYLPGFMHVGI-WPIIMSLSMFIQMKMS---------------------PPPADKGQ 516 + F + V +I+ ++ + ++S D Sbjct: 180 PIDFTRVNIIAVAAPLILIIVVATHMNGRLSVNRQKARRESGLQAAPTSGQMQMQMDLMN 239 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 M+L +MP+ +F + GL+ Y +N+ + QQ I Sbjct: 240 KMMLWFMPLTILFTGVLWHLGLLFYMVANNIWTFFQQRWIFNK 282 >gi|293376114|ref|ZP_06622364.1| putative stage III sporulation protein J [Turicibacter sanguinis PC909] gi|292645268|gb|EFF63328.1| putative stage III sporulation protein J [Turicibacter sanguinis PC909] Length = 263 Score = 83.1 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ + + L N G+AI+L T V+L+ PL K ++A M+ IQP++ +++ Sbjct: 41 FVLPLATFITFLYNLLNQNLGLAIILATAIVRLVLMPLYLKSNKTSAIMQEIQPEMQQIQ 100 Query: 401 EKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +K++ Q +Q M+ LYK +N NP+ GC LQ+PVF A Y+ IS RH Sbjct: 101 KKYENKTDQASQVKMQTEMMDLYKKYNFNPMMGCILPFLQMPVFLAFYQAIS-----RH- 154 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSMFIQMKMSPPPA--- 512 IKD AA++ F + + I +I +S++ Q M+ Sbjct: 155 ---PLIKDAAASE-------FLGVNLGATVQLANWILALIVAGISIYSQRLMNKSMMTNS 204 Query: 513 -------DKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ +MP + P +Y+ +V+ I+Q ++ + Sbjct: 205 SAQQNKTSNMMMKVMTYYMPFAMFSITIATPFAFGLYFLTGSVMQIIQFFIVKRST 260 >gi|207110019|ref|ZP_03244181.1| putative inner membrane protein translocase component YidC [Helicobacter pylori HPKX_438_CA4C1] Length = 136 Score = 83.1 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 60/131 (45%), Positives = 90/131 (68%), Gaps = 1/131 (0%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P +I++G F AK +F+L+ Y Y VGN+G AI+L T+ V+++ +PL+ K VS Sbjct: 7 PMLTDVIEYGLITFFAKGVFVLLDYLYQFVGNWGWAIILLTIIVRIILYPLSYKGMVSMQ 66 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +K + PK+ EL+EK+K PQ LQ M+QLYK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 67 KLKELAPKMKELQEKYKG-EPQKLQAHMMQLYKKHGANPLGGCLPLILQIPVFFAIYRVL 125 Query: 448 SISLEMRHAPF 458 ++E++ + + Sbjct: 126 YNAVELKSSEW 136 >gi|297742331|emb|CBI34480.3| unnamed protein product [Vitis vinifera] Length = 443 Score = 83.1 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 107/301 (35%), Gaps = 36/301 (11%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + F + F+ +Q ++ + + + A+ + Sbjct: 59 NTSGGFGAFFQGKGFSPLSHQVAVGSSYSRYMSTAIGEGSENIGVIAETPVDLIANATVD 118 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV 384 E+ I +F+ + L+ ++ G ++ +I LTT+ ++ + PL Q Sbjct: 119 VAS--EVSIAAADSFFLVGILQHLIGGVHSYTGLSWAASIALTTLLIRGMTVPLLVNQLK 176 Query: 385 STANMKNIQPKIDELREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 ST+ + ++P ++ +RE+ + + K M Q++K + + P +++Q PV Sbjct: 177 STSKLTLMRPHLEAIREEMQAKGMEPSAVAEGNKRMQQIFKEYGVTPFTPLKGLIIQGPV 236 Query: 440 FFAIYKVISISLE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 F + + IS ++ W DL D I PI+ Sbjct: 237 FVSFFLGISNMVQKVPSFKTGGALWFTDLTTPDSFY-------------------IMPIL 277 Query: 497 MSLSMFIQMKMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 L+ I ++ + P + + V +F G+ YW SN+ S+ Sbjct: 278 AGLTFLITVEFNMQDGMQGNPTAGTMKKFSRALAFLSVPFTMNFAQGIFCYWIPSNLFSL 337 Query: 551 V 551 Sbjct: 338 A 338 >gi|146421675|ref|XP_001486782.1| hypothetical protein PGUG_00159 [Meyerozyma guilliermondii ATCC 6260] Length = 361 Score = 83.1 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 89/240 (37%), Gaps = 23/240 (9%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMK 390 I + + + + G I+ TV V+ + FPL K ++ A M Sbjct: 73 DSIGMAQGWGPTSLVERFLELTHVYTGLPWWGTIIAATVAVRAVMFPLYVKSSINAAKMT 132 Query: 391 NIQPK----IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL---LQIPVFFAI 443 ++P+ + +LRE L K H+I+ +P+L L F A+ Sbjct: 133 KVKPELDQIMKDLREAENPQEQVQAAHKRKALMKQHDIHMSHQMFPLLQLPLAYGFFQAL 192 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 K+ + +E + + W +DL DP + + + + + Sbjct: 193 RKMANFPVEGFSSQGYAWFEDLTQVDPYCGLQVIAA---------GIVVLMVRIGGET-- 241 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + ++ ++P+ +F F A +++Y++ +++ S VQ V+ + + Sbjct: 242 ----GAATMNPMLKKVMTYVPIASIFITKEFSAAVVLYFAINSMASFVQALVLRNKYFRK 297 >gi|190344393|gb|EDK36061.2| hypothetical protein PGUG_00159 [Meyerozyma guilliermondii ATCC 6260] Length = 361 Score = 83.1 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 89/240 (37%), Gaps = 23/240 (9%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMK 390 I + + + + G I+ TV V+ + FPL K ++ A M Sbjct: 73 DSIGMAQGWGPTSLVERFLELTHVYTGLPWWGTIIAATVAVRAVMFPLYVKSSINAAKMT 132 Query: 391 NIQPK----IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL---LQIPVFFAI 443 ++P+ + +LRE L K H+I+ +P+L L F A+ Sbjct: 133 KVKPELDQIMKDLREAENPQEQVQAAHKRKALMKQHDIHMSHQMFPLLQLPLAYGFFQAL 192 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 K+ + +E + + W +DL DP + + + + + Sbjct: 193 RKMANFPVEGFSSQGYAWFEDLTQVDPYCGLQVIAA---------GIVVLMVRIGGET-- 241 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + ++ ++P+ +F F A +++Y++ +++ S VQ V+ + + Sbjct: 242 ----GAATMNPMLKKVMTYVPIASIFITKEFSAAVVLYFAINSMASFVQALVLRNKYFRK 297 >gi|114652030|ref|XP_001156574.1| PREDICTED: oxidase (cytochrome c) assembly 1-like isoform 1 [Pan troglodytes] Length = 387 Score = 83.1 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 28/154 (18%) Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIK 463 M K H I + Q P+F + + + + W + Sbjct: 147 YYKASSEMALYQKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPSLQTGGLWWFQ 206 Query: 464 DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG-----QAM 518 DL +DP + I P+ ++ +M+ +++ + Sbjct: 207 DLTVSDP-------------------IYILPLAVTATMWAVLELGAETGVQSSDLQWMRN 247 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ MP++ + FP + +YW SN+ S+VQ Sbjct: 248 VIRVMPLITLPITMHFPTAVFMYWLSSNLFSLVQ 281 >gi|116495158|ref|YP_806892.1| preprotein translocase subunit YidC [Lactobacillus casei ATCC 334] gi|116105308|gb|ABJ70450.1| Preprotein translocase subunit YidC [Lactobacillus casei ATCC 334] Length = 329 Score = 83.1 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 42/260 (16%) Query: 337 GWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 ++ I P+ LM + +LV ++GIAI++ T+ V+L+ PL +Q Sbjct: 43 TFYKVIGLPLQHLMEWIASLVGTASSYGIAIIVITLLVRLIVLPLMLRQQRTMTAYQEKQ 102 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKT------HNINPLAGCWPILLQIPVFFAI 443 K IQP++ ++E K++ Q AM + ++ P GC P+L+Q+P+F + Sbjct: 103 KIIQPQLKIVQEATKRAKTPEQQMAMNGYMRKIYSANGTSMIPSMGCLPMLIQLPIFSGL 162 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 Y+ I+ S E+ A F+G + I T+ LP+ + + + P Sbjct: 163 YQAIAYSPEISEATFFG----IQLGHSNFIVTILATLPYIVVSLIMLQGVP--------- 209 Query: 504 QMKMSPPPADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q + ++ P++ + AGL +Y+ +I I+QQA++ Sbjct: 210 ----------PEQRKAMQTTAFLNPIMTFVFCMMYNAGLGLYFGAGGIILIIQQAIVT-- 257 Query: 560 HGAEIGLIDRLRSTFSKNYN 579 + + R+ + +N Sbjct: 258 YIVTPNIRKRMDAEMEENPP 277 >gi|295099702|emb|CBK88791.1| protein translocase subunit yidC [Eubacterium cylindroides T2-87] Length = 330 Score = 83.1 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 97/260 (37%), Gaps = 38/260 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F I GWF + + + G+ I++TT+ ++L+ F +K +S+ M Sbjct: 83 FSEAIADGWFDGLIVWPIAQIINTIASYTDAGVGIIVTTLLIQLIVFMFTRKSQMSSQRM 142 Query: 390 KNIQPKIDE----LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + IQP++ + ++K ++ + LYK ++I+P + +Q+P+ +Y Sbjct: 143 QEIQPEMQKIQNKYKDKTDDRSKMMMYQETQNLYKKYDIHPFGSILVMFIQLPIMMGMYY 202 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + + F+G + + + I ++M + + M Sbjct: 203 ATMRAASVVYGSFFG------------LPFSGTPIDGFTQMQFGYIIIYVLMIVCQLLSM 250 Query: 506 KM----------------------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 KM + + + + F S+P + YW Sbjct: 251 KMPQILKKIQDKKDHVKEKKYAEENQNSMMNTMNTTMYFSTAMIAFLYISWPIAMSFYWL 310 Query: 544 WSNVISIVQQAVIMKMHGAE 563 S++I I+Q V+ K+ + Sbjct: 311 VSSIIRIIQSVVLHKIMNKD 330 >gi|224142675|ref|XP_002324680.1| inner membrane protein [Populus trichocarpa] gi|222866114|gb|EEF03245.1| inner membrane protein [Populus trichocarpa] Length = 310 Score = 82.7 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 91/229 (39%), Gaps = 22/229 (9%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E+ I + + + +N N+ +I++TT+ ++ PL Q +T+ + Sbjct: 5 EVAIAAADSFLPVAVLQHAIDAVHNFTGFNWWASIVVTTLLIRSFTLPLLINQLKATSKL 64 Query: 390 KNIQPKIDELREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 ++P ++E++++ ++ QK M +L+K H ++P + +Q PVF + + Sbjct: 65 SIVRPHLEEVKQRVERQGMDPTAVSEGQKEMKKLFKEHGVSPFTPLKGLFIQAPVFISFF 124 Query: 445 KVISISLE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 I+ E + W DL AD IF + L F + + Sbjct: 125 LAITNMAEKVPSFKSGGAFWFVDLTTADDLYIFPVLTALTFLITVECNT----------- 173 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 Q M PA + + V SFP + YW SN+ S+ Sbjct: 174 --QEGMEGNPAAGTMKNVSRALAAASVPLTMSFPKAIFCYWITSNLFSL 220 >gi|256850849|ref|ZP_05556238.1| preprotein translocase subunit YidC [Lactobacillus jensenii 27-2-CHN] gi|260661060|ref|ZP_05861974.1| preprotein translocase subunit YidC [Lactobacillus jensenii 115-3-CHN] gi|282934480|ref|ZP_06339735.1| putative membrane protein [Lactobacillus jensenii 208-1] gi|297205723|ref|ZP_06923118.1| membrane protein OxaA [Lactobacillus jensenii JV-V16] gi|256615911|gb|EEU21099.1| preprotein translocase subunit YidC [Lactobacillus jensenii 27-2-CHN] gi|260547997|gb|EEX23973.1| preprotein translocase subunit YidC [Lactobacillus jensenii 115-3-CHN] gi|281301427|gb|EFA93716.1| putative membrane protein [Lactobacillus jensenii 208-1] gi|297148849|gb|EFH29147.1| membrane protein OxaA [Lactobacillus jensenii JV-V16] Length = 324 Score = 82.7 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 97/254 (38%), Gaps = 32/254 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK----- 390 + + + + + G AI + T ++ + PL + + Sbjct: 44 YQFIGIPIRNIMLATENAIGGTNGAGWAIAIITAVIRFVLLPLMLSSSKKSTIQQEKVSR 103 Query: 391 ---NIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIY 444 + D L+++ Q+ + ++Y+ +N++ GC P+++Q P IY Sbjct: 104 LQDQFKLIQDALKDRSLTPDKQMQISQLQQKVYRENNLSITGGIGCLPLIVQFPFMIGIY 163 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + ++ S + + F+G ++ P+ +F + G L + + + +S Q Sbjct: 164 QAVAYSDALYKSSFFG----VSLGKPSLLFAIVGALFYLAQSLLMLR------GVS--EQ 211 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + Q+ I P++ +F S P L +Y+ +I+++QQ ++ + Sbjct: 212 QR------AAMQSTIF-ISPLMTLFISMSTPGALGLYFLVGGIIALIQQVIVT--YIILP 262 Query: 565 GLIDRLRSTFSKNY 578 ++ + + Sbjct: 263 RAKAKIDAELKEKP 276 >gi|159126095|gb|EDP51211.1| mitochondrial export translocase Oxa1, putative [Aspergillus fumigatus A1163] Length = 436 Score = 82.7 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 88/239 (36%), Gaps = 38/239 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 + + + + + + + G A ++ T + ++L ++ M NI+P Sbjct: 55 LDYGWGPSSIIQFFIEHIHIWGGLPWWASVVGTGILLRLALLYPTLGAVDTSTKMLNIKP 114 Query: 395 KIDELREKF-------KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + LR++ Q L+ + +L++ I P+L QIP F Y+V+ Sbjct: 115 VTEPLRQQMIMRGKEGNQIEMLKLRAEIQKLHQEQGIVAWKSFIPML-QIPFGFGCYRVV 173 Query: 448 SISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + W+KDL ADP I P +L M++ Sbjct: 174 KGMAALPVPGLTLESVAWLKDLTVADPYF-------------------ILPAASALFMYL 214 Query: 504 QMKM------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ + +++ +P + ++ FP+ L +Y+ + + + Q ++ Sbjct: 215 SIRKGGENGVNQLQGTALGRLLMFGLPALSFLFMAFFPSALQLYFVTTGLFGLGQAYLL 273 >gi|218191963|gb|EEC74390.1| hypothetical protein OsI_09733 [Oryza sativa Indica Group] Length = 446 Score = 82.7 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 28/151 (18%) Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE---MRHAPFWGWIKDLAAADPTNI 473 +L+ H + PL + +Q P+F + + IS +E W DL D Sbjct: 246 ELFLRHGVTPLTPLKGLFIQAPIFMSFFFAISNMVEKVPSFKGGGIYWFTDLTTPD---- 301 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---PPADKGQAMILNW---MPVVF 527 + I P++ SL+ + ++++ + + N+ M V+ Sbjct: 302 ---------------ELLILPMLTSLTFLVTVELNMQDGMEGNPMLKTMKNFSRVMAVLT 346 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + SFP + YW SN+ S+ V+ K Sbjct: 347 IPFTMSFPKAIFFYWVTSNLFSLGYGFVLRK 377 >gi|210619554|ref|ZP_03292045.1| hypothetical protein CLONEX_04279 [Clostridium nexile DSM 1787] gi|210148841|gb|EEA79850.1| hypothetical protein CLONEX_04279 [Clostridium nexile DSM 1787] Length = 247 Score = 82.7 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 11/103 (10%) Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFA 530 F + + P++ LS +I K+ P ++N MP++ VF Sbjct: 76 NFSIGLIIVALAIPVLSGLSQWISAKLMQQATSTGNDDDNPMAAQMKTMMNVMPLISVFM 135 Query: 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 S PAGL IYW S V+ +QQ VI K + + + + Sbjct: 136 CFSMPAGLGIYWIASAVVRTIQQLVINKFLSKK-SMDELIEEN 177 >gi|169826543|ref|YP_001696701.1| membrane protein oxaA 2 [Lysinibacillus sphaericus C3-41] gi|168991031|gb|ACA38571.1| Membrane protein oxaA 2 precursor [Lysinibacillus sphaericus C3-41] Length = 210 Score = 82.7 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 99/230 (43%), Gaps = 32/230 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F F+ +P+ + + ++ G++ I ++ T+ V+++ PL K + K + I Sbjct: 1 MFTFLTQPIIYFIHFIHSFTGSYAIGVISITIAVRVILMPLFIKSAKHQKHSKELMTVIK 60 Query: 398 E--------LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 L+ +S +Q+ + +L + L GC PI++Q+PV F++Y I + Sbjct: 61 PELDVLTAKLKNSNDESEKITVQQKIQELTSDSLKSSLLGCLPIIIQLPVLFSLYYAIKL 120 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + + W+ G + +GI II + F+Q +S Sbjct: 121 DTVIASE-NFLWMN---------------------LGTVDIGI-SIIACVIYFMQSWLSL 157 Query: 510 PPADKGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 +L ++ P++ + PA + IYW+ S ++ ++QQ +I K Sbjct: 158 DKNQPMNVKVLVFINPIMILIFSLFNPAIIPIYWTVSALLLMIQQLIIKK 207 >gi|296111276|ref|YP_003621658.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154] gi|295832808|gb|ADG40689.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154] Length = 306 Score = 82.3 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 93/265 (35%), Gaps = 43/265 (16%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNL---VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + +I P+ +M+ V G AI++ TV ++L+ P Q ++T + Sbjct: 26 QHSRMYRWIGHPLADIMASIAQFIGGVNGIGWAIIIITVILRLVLLPFFLNQQINTTINQ 85 Query: 391 NIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILLQIPVF 440 + R+ Q AM+ LY+ ++++ + G + +Q+P+F Sbjct: 86 IKMQTLKPEIDKLQALTRKAGTTQEQQQASMAMMSLYRENDVSVIGGISFLTMAMQLPIF 145 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +Y I + ++ A F G+ DL I+ + + Sbjct: 146 SGLYSAILHAPALQGATFLGF--DLGKP---------------------QIIFAVAAGIV 182 Query: 501 MFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 IQ ++ + Q ++ PV+ + +Y+ + +++Q + Sbjct: 183 YLIQAWLAMQHMPEEQKKTSAAMIFISPVMIFVFAMIASGAIGLYFVIGGLFALLQTLI- 241 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581 H GL R+ F + Sbjct: 242 --QHFQRPGLEKRVAREFKIKKTAD 264 >gi|227892815|ref|ZP_04010620.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus ultunensis DSM 16047] gi|227865456|gb|EEJ72877.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus ultunensis DSM 16047] Length = 324 Score = 82.3 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 98/258 (37%), Gaps = 43/258 (16%) Query: 339 FYFIAKPMFMLMSYFYNLV-------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + ++ KP+ +M + +++ I ++ V + L K M Sbjct: 43 YQWLGKPLQNIMIHTAHMIGGQNGAGWGIVIITVVVRVILMPLMLIQQNKSVRQQEKMAR 102 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-------LAGCWPILLQIPVFFAIY 444 +QP++ ++ K Q+ + ++ + GC P+++Q+P+ + IY Sbjct: 103 LQPQMKLIQAAMKHKGITPQQQMTLSGWQRELYSKNEMSLTGGIGCLPLIIQLPIMWGIY 162 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + S ++ H+ F+G L+ + II ++ IQ Sbjct: 163 QAVFYSPQLAHSTFFG--ISLSQK---------------------SLVLAIIATVFTVIQ 199 Query: 505 MKMS----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S P K ++ + P++ +F SF L +YW+ N++ IVQQ ++ + Sbjct: 200 GYISLIGIPEEQKKTMQSMMLFNPIMTLFFSLSFSGALALYWAAGNLVMIVQQIIVTFIL 259 Query: 561 GAEIGLIDRLRSTFSKNY 578 + + + Sbjct: 260 T--PQVKKHVANEIKDKP 275 >gi|291457891|ref|ZP_06597281.1| membrane protein OxaA [Oribacterium sp. oral taxon 078 str. F0262] gi|291419435|gb|EFE93154.1| membrane protein OxaA [Oribacterium sp. oral taxon 078 str. F0262] Length = 436 Score = 82.3 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 11/116 (9%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMF----IQMKMSPPPAD------KGQAMILNWM 523 L Y + PI+ L+ + + K + AD + + M Sbjct: 243 LNLSTAPSSYGLRPTIYWLIPILAGLTQWASTILMQKQNMAAADGSDQSAQMMKSMNIMM 302 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 P++ V+ SF +G+ +YW S++ ++QQ + G + + L+ + +K Sbjct: 303 PLMSVYFCFSFASGIGLYWIASSLFMLIQQLALNWFFGKKTN-EELLQESMAKANA 357 Score = 53.8 bits (127), Expect = 7e-05, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 4/131 (3%) Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQ 382 IP F + + + + + N G+AI+L T+ ++L FP + KQ Sbjct: 7 NTSNIPLFGPIWNLIVTILGLIMNAIYVFLDRIGIPNIGLAIILFTLVTRILLFPTSLKQ 66 Query: 383 YVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 S+ M+ +QP+I ++EK+K Q M +Y+ + + +GC P++LQ+P Sbjct: 67 QKSSRMMQVMQPEIKAIQEKYKNKSDNASMMAQQTEMKAVYEKYGTSMTSGCLPLVLQLP 126 Query: 439 VFFAIYKVISI 449 + FA+Y++I Sbjct: 127 IIFALYRIIMN 137 >gi|50405829|ref|XP_456555.1| DEHA2A05368p [Debaryomyces hansenii CBS767] gi|49652219|emb|CAG84510.1| DEHA2A05368p [Debaryomyces hansenii] Length = 374 Score = 82.3 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 87/230 (37%), Gaps = 23/230 (10%) Query: 342 IAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK----I 396 + L+ Y + G I++TTV V+ + FPL K ++ A M I+P+ + Sbjct: 93 PTALIERLLEYSHVYTGLPWWATIIVTTVAVRSVMFPLYVKASINGAKMAKIKPELDQVM 152 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL---LQIPVFFAIYKVISISLEM 453 ELRE L K ++++ +P+L + F + K+ + +E Sbjct: 153 QELREAENPQEQVQAAHKRKALMKDNDVHMSHQMFPVLQLPIAYGFFQGLRKMANHPVEG 212 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W DL DP + V + + + + Sbjct: 213 FSTQGNAWFADLTQVDPYCGLQIISA---------AVVVSMVRLGGET------GAAAMN 257 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ ++P++ +F A +++Y++ +++ S +Q V+ + + Sbjct: 258 PMMKKVMTYVPILSIFITKELSAAVVLYFAANSIFSFIQALVLRNKYFRK 307 >gi|313124172|ref|YP_004034431.1| preprotein translocase subunit yidc [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280735|gb|ADQ61454.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 320 Score = 82.3 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 93/268 (34%), Gaps = 39/268 (14%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYV 384 G +Y+I + + + + + + + G AI++ T+ V+++ PL Q Sbjct: 35 KAPASGPYYWIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLGVRVILMPLMLSQQH 94 Query: 385 STANMKNIQPKIDELREK---------FKQSPPQVLQKAMIQLYKTHNINPL--AGCWPI 433 + + + L ++Y +N++ GC P+ Sbjct: 95 KATLQQEKMHLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPL 154 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+ IY+ ++ S + + F+G + + I Sbjct: 155 LIQMPIMIGIYQAVAYSNALAKSTFFG-------------------ISLSSKSMVLAIIA 195 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + + ++ M P K + P++ F SF L +YW+ N++ ++QQ Sbjct: 196 TVFALIQSYVAMIGIPEEQKKTMQATMLMNPIMTFFFSMSFSGALALYWAVGNLVMVIQQ 255 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + R+ + + Sbjct: 256 LITT--FIVQPRAKKRVSKELEDSPIVE 281 >gi|255074419|ref|XP_002500884.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299] gi|226516147|gb|ACO62142.1| cytochrome oxidase biogenesis family [Micromonas sp. RCC299] Length = 223 Score = 82.3 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 90/238 (37%), Gaps = 50/238 (21%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ-----SPPQVLQ 412 + AIM TT +++ P Q A M +P+I+ L + K Q Sbjct: 6 MEWWAAIMATTAIMRVFVMPFMVMQQRVAARMHIAKPEIEALNARIKGMGGDQQVMAEAQ 65 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG-----W------ 461 K + ++K HN NP PI +Q P+F + Y IS + P + W Sbjct: 66 KEIFAIWKKHNCNPAYMMLPIAVQAPLFISFYFAISEMA--KGVPSFASGGPDWPLGPIS 123 Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM----SPPPADKGQA 517 + DL AADPT I P++ S + +++ +P + Q Sbjct: 124 MHDLTAADPTY-------------------IMPVLSSATFLATVELGGAGNPETSGAAQQ 164 Query: 518 MILN-----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV----IMKMHGAEIGL 566 ++ + V + + F G+ +YW +N+ S+ Q ++K A + Sbjct: 165 TMMTKWGLRALSVALIPMTAGFSKGVFVYWITTNMFSLGQTLAFKVPLIKKIVAIPEI 222 >gi|325473998|gb|EGC77186.1| hypothetical protein HMPREF9353_01536 [Treponema denticola F0402] Length = 894 Score = 82.0 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 16/207 (7%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMKNIQPKIDELREKFK 404 + F N G AI++ ++FV ++ P+ + Q K ++ KI +++ FK Sbjct: 21 FLVAFKIFNENVGGAIVIVSLFVNIVTLPIYAAAEEWQNKERLLQKRLKNKIKDIKAVFK 80 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 ++ A + H + L G + +L QIP F A Y +S L + + ++ + Sbjct: 81 GDERYMILSAYYRQNNYHPLYSLRGMFGLLFQIPFFIAAYHFLSE-LALLQGSGFLFLDN 139 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L D + PI+M+L + + + + + L M Sbjct: 140 LGKPD-----------ALLNILSYKINFLPILMTLVNLLSVMIYTKNFSIKEKIQLYIMA 188 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIV 551 ++F+F L + P+GL+ YW+ +N+ S+ Sbjct: 189 IIFLFLLYNSPSGLVFYWTLNNIFSLF 215 >gi|149063881|gb|EDM14151.1| rCG23545, isoform CRA_b [Rattus norvegicus] Length = 266 Score = 82.0 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 63/176 (35%), Gaps = 28/176 (15%) Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 M+ +I E + Q+ M K H+I L Q P+F + + Sbjct: 1 MPEMQKFSARIREAKLSGDQAEFYKATIEMTHYQKKHDIKFFRPLILPLTQAPIFISFFI 60 Query: 446 VISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 + + W +DL +DP + + P++++ +M Sbjct: 61 ALREMANLPVPSLQTGGLWWFQDLTVSDP-------------------IYVLPLVVTATM 101 Query: 502 F----IQMKMSPPPAD-KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + + +D + ++ MP+ + FP+ + +YW SNV S+ Q Sbjct: 102 WGVLELGAETGMQSSDLQLMRNVIRVMPLAVLPVTIHFPSAVFMYWLSSNVFSLCQ 157 >gi|291444979|ref|ZP_06584369.1| membrane protein [Streptomyces roseosporus NRRL 15998] gi|291347926|gb|EFE74830.1| membrane protein [Streptomyces roseosporus NRRL 15998] Length = 246 Score = 82.0 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 21/204 (10%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + AI+L T V+L PL++ +QP+I ELR+K P+ +QKA++ Sbjct: 15 TASTAAAIILFTALVRLAVHPLSRAAARGQKARSRLQPQIAELRKKH-GRNPERMQKAIM 73 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD-LAAA-DPTNIF 474 +L+ ++PL+GC P LLQ+P FF +Y + S + P D L A Sbjct: 74 ELHAAEKVSPLSGCLPSLLQMPAFFLLYH-LFSSSSIGGEPNALLSHDLLGAPLGGRWHD 132 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMF------IQMKMSPPPAD--------KGQAMIL 520 L PF G +++G++ I+ +++ F QM +P G + Sbjct: 133 ALAHGGPFGGQGLVYLGLFVIVAAVATFSYGRTKRQMAANPMTPAAGPDGQPVPGMGAMT 192 Query: 521 NWMPVVFVFALSS---FPAGLIIY 541 MP++ F L + P +Y Sbjct: 193 KLMPLLSFFTLITVAVVPLAAALY 216 >gi|225426348|ref|XP_002270313.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 445 Score = 82.0 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 107/301 (35%), Gaps = 36/301 (11%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + F + F+ +Q ++ + + + A+ + Sbjct: 59 NTSGGFGAFFQGKGFSPLSHQVAVGSSYSRYMSTAIGEGSENIGVIAETPVDLIANATVD 118 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYV 384 E+ I +F+ + L+ ++ G ++ +I LTT+ ++ + PL Q Sbjct: 119 VAS--EVSIAAADSFFLVGILQHLIGGVHSYTGLSWAASIALTTLLIRGMTVPLLVNQLK 176 Query: 385 STANMKNIQPKIDELREKFKQSPPQ-----VLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 ST+ + ++P ++ +RE+ + + K M Q++K + + P +++Q PV Sbjct: 177 STSKLTLMRPHLEAIREEMQAKGMEPSAVAEGNKRMQQIFKEYGVTPFTPLKGLIIQGPV 236 Query: 440 FFAIYKVISISLE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 F + + IS ++ W DL D I PI+ Sbjct: 237 FVSFFLGISNMVQKVPSFKTGGALWFTDLTTPDSFY-------------------IMPIL 277 Query: 497 MSLSMFIQMKMSPP------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 L+ I ++ + P + + V +F G+ YW SN+ S+ Sbjct: 278 AGLTFLITVEFNMQDGMQGNPTAGTMKKFSRALAFLSVPFTMNFAQGIFCYWIPSNLFSL 337 Query: 551 V 551 Sbjct: 338 A 338 >gi|255731476|ref|XP_002550662.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240131671|gb|EER31230.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 378 Score = 82.0 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 101/255 (39%), Gaps = 33/255 (12%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + L+ + + G I+ V +++ FPL K + M I+P+++ Sbjct: 95 WGPTSIIERLLEFTHVYTGLPWWGTIITAAVAIRIFIFPLYVKASANATKMSKIKPEMEA 154 Query: 399 LREKFK---QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV----FFAIYKVISISL 451 + ++ K Q+ + +L K H+++ LA L+QIP F A+ K+ + ++ Sbjct: 155 IMDEIKAGGQAEQMKAMEKRRKLMKKHDVSMLAS-VYPLVQIPFAYGFFQALRKMANANV 213 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII-MSLSMFIQMKMSPP 510 E + W ++L DP L + I I+ M Sbjct: 214 EGFSDQGYAWFQNLIEVDPY----------LGLHAISCLAIMSIVRMGGET------GQA 257 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA-----VIMKMHGAEIG 565 KG ++ +P+ + +F A +++Y++ ++V+S++Q K G Sbjct: 258 TMAKGMQKLMYVLPLASIVITKNFAACVMVYFAANSVLSLIQSLIFKSSFFRKALGMPPK 317 Query: 566 LIDRLRSTFSKNYNS 580 L ++ + N + Sbjct: 318 LT--IQQLQANNPKA 330 >gi|213407522|ref|XP_002174532.1| mitochondrial inner membrane translocase Oxa101 [Schizosaccharomyces japonicus yFS275] gi|212002579|gb|EEB08239.1| mitochondrial inner membrane translocase Oxa101 [Schizosaccharomyces japonicus yFS275] Length = 361 Score = 82.0 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 105/306 (34%), Gaps = 37/306 (12%) Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 F+YL + + G+S + + + + H I Sbjct: 7 FRYLKQHRFHVGRPYKLSLGIKYRGQSFRVS-QIRLQSTAPTNLVHSNLAADIIASNSTG 65 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 ++ A + + +I+LTT+ ++ L PL + + + +IQP Sbjct: 66 ISHSYWPYAFIQNAVNGIHCISGAPWWASIILTTIGIRSLMLPLTLRSMKNARALSHIQP 125 Query: 395 KIDEL-------REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++ + + + A+ ++Y+++NINPL ++Q VF + + + Sbjct: 126 RVKKYVDAMKAAKLENDTYAVTQNAYAIQKIYRSNNINPLTVAISPIIQATVFISFFYGL 185 Query: 448 S----ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 S+ ++ W +DL DP I P + L +F+ Sbjct: 186 RKMSQASIAGFNSGGLLWFRDLTTYDPYY-------------------ILPTLNGLLVFL 226 Query: 504 QMKMS------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + + + ++ F P+ + +YW S + + +Q V Sbjct: 227 SFRENARFGTSSAASSVHMQTFMQLFCLLTPFITCHVPSSVFLYWIPSTMFTAIQALVTR 286 Query: 558 KMHGAE 563 ++ A+ Sbjct: 287 RLDRAK 292 >gi|119498827|ref|XP_001266171.1| mitochondrial export translocase Oxa1, putative [Neosartorya fischeri NRRL 181] gi|119414335|gb|EAW24274.1| mitochondrial export translocase Oxa1, putative [Neosartorya fischeri NRRL 181] Length = 410 Score = 82.0 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 81/239 (33%), Gaps = 38/239 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVK--------LLFFPLAKKQYVSTA 387 + + + + + + + G A ++ T + L + K Sbjct: 29 LDYGWGPSSIIQFFIEHIHMWGGLPWWASIVGTGLLLRLALLYPTLGAVDTSTKMLNIKP 88 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + ++ ++ + Q L+ + +L++ I P+L QIP F Y+V+ Sbjct: 89 VTEPLRQQMIMRGKDGNQIEMLKLRAEIQKLHQEQGIVAWKSFIPML-QIPFGFGCYRVV 147 Query: 448 SISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + W+KDL ADP I P SL M++ Sbjct: 148 KGMAALPVPGLTMESVAWLKDLTVADPYF-------------------ILPAASSLFMYL 188 Query: 504 QMKM------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ + +++ +P ++ FP+ L +Y+ + + + Q ++ Sbjct: 189 SIRKGGENGVNQLQGTSLGRLLMFGLPAFSFLFMAFFPSALQLYFVTTGLFGLGQAYLL 247 >gi|13508419|ref|NP_110369.1| putative inner membrane protein translocase component YidC [Mycoplasma pneumoniae M129] gi|2496458|sp|P75112|OXAA_MYCPN RecName: Full=Membrane protein oxaA gi|1673823|gb|AAB95810.1| conserved hypothetical protein [Mycoplasma pneumoniae M129] gi|301633303|gb|ADK86857.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma pneumoniae FH] Length = 385 Score = 82.0 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 94/268 (35%), Gaps = 32/268 (11%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I + + L N +++++ V+L+ + ++ M +Q Sbjct: 124 PASQIVLPIMYATRVPLGSGPELGFNMILSLIVLLFLVRLITIVITLNSTLALEKMNEVQ 183 Query: 394 PKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K+ E+ K+K + Q ++ LYK HNI A + + +P+F IY+ I Sbjct: 184 GKLAEINAKYKGALDLQSKRNRQMEIMSLYKKHNIKSSASFVQVFVTLPIFLIIYR-IVT 242 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 +L A DL+ T IF+ F + F+ + + P+ FI K+ Sbjct: 243 TLRPIKAIILFNFWDLSKVPLTEIFSNFTSTGWTFIIFLII-VLPV-----QFISQKLPQ 296 Query: 508 ------SPPPADKGQA---------MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + Q + VF + AG+ +YW + + +++Q Sbjct: 297 IWASKRNENAKAHSQKSIEQLNKTKRMQLIFYFVFAVITAFSAAGVGVYWFLNALFTLLQ 356 Query: 553 QA----VIMKMHGAEIGLIDRLRSTFSK 576 I+K +L + Sbjct: 357 SYLTHLFIVKRRTRRRLTYSKLEQMLER 384 >gi|325845290|ref|ZP_08168594.1| putative stage III sporulation protein J [Turicibacter sp. HGF1] gi|325488731|gb|EGC91136.1| putative stage III sporulation protein J [Turicibacter sp. HGF1] Length = 263 Score = 81.6 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 F+ + + L N G+AI+L T V+L+ PL K ++A M+ IQP++ ++ Sbjct: 41 FVLPLATFITFLYNLLNQNLGLAIILATAIVRLVLMPLYLKSNKTSAIMQEIQPEMQRIQ 100 Query: 401 EKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 +K++ Q +Q M+ LYK +N NP+ GC LQ+PVF A Y+ IS RH Sbjct: 101 KKYENKTDQASQVKMQTEMMDLYKKYNFNPMMGCILPFLQMPVFLAFYQAIS-----RH- 154 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPAD 513 IKD AA++ F + + I +I++ ++ S Sbjct: 155 ---PLIKDAAASE-------FLGVNLGATVQLANWILALIVAGLSIYSQRLMNKSMMTNS 204 Query: 514 KGQA-----MILNWMPVVFVFALSSF----PAGLIIYWSWSNVISIVQQAVIMKMH 560 Q M++ M FA+ S P +Y+ +V+ I+Q ++ + Sbjct: 205 SAQQNKTSNMMMKVMTYYMTFAMFSITIATPFAFGLYFLTGSVMQIIQFFIVKRST 260 >gi|239941533|ref|ZP_04693470.1| hypothetical protein SrosN15_11094 [Streptomyces roseosporus NRRL 15998] gi|239987998|ref|ZP_04708662.1| hypothetical protein SrosN1_11878 [Streptomyces roseosporus NRRL 11379] Length = 256 Score = 81.6 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 22/229 (9%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 M F + + L+ + + AI+L T V+L PL++ Sbjct: 1 MSAFMSAFASLVGSLADLLQPLFQ-TASTAAAIILFTALVRLAVHPLSRAAARGQKARSR 59 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP+I ELR+K P+ +QKA+++L+ ++PL+GC P LLQ+P FF +Y + S Sbjct: 60 LQPQIAELRKKH-GRNPERMQKAIMELHAAEKVSPLSGCLPSLLQMPAFFLLYH-LFSSS 117 Query: 452 EMRHAPFWGWIKD-LAAA-DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF------I 503 + P D L A L PF G +++G++ I+ +++ F Sbjct: 118 SIGGEPNALLSHDLLGAPLGGRWHDALAHGGPFGGQGLVYLGLFVIVAAVATFSYGRTKR 177 Query: 504 QMKMSPPPAD--------KGQAMILNWMPVVFVFALSS---FPAGLIIY 541 QM +P G + MP++ F L + P +Y Sbjct: 178 QMAANPMTPAAGPDGQPVPGMGAMTKLMPLLSFFTLITVAVVPLAAALY 226 >gi|225377581|ref|ZP_03754802.1| hypothetical protein ROSEINA2194_03231 [Roseburia inulinivorans DSM 16841] gi|225210557|gb|EEG92911.1| hypothetical protein ROSEINA2194_03231 [Roseburia inulinivorans DSM 16841] Length = 425 Score = 81.6 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 10/134 (7%) Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---- 512 L +D + + + P+I L+ + +K+ P A Sbjct: 221 SHVNNFIGLNISDTPFQIIKAAFAGGSILMAVLALLIPVISYLTQVLNIKLMPTAATAGG 280 Query: 513 --DKG--QAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 D+ Q ++N MP+ + + P GL IYW S V+ +QQ + K H +I L Sbjct: 281 DNDQMAQQMKMMNRTMPLFSLVMCFTVPVGLGIYWIASAVVRSIQQFFLNK-HFDKIDLD 339 Query: 568 DRLRSTFSKNYNSQ 581 D + K + Sbjct: 340 DIIAKNQEKAKKKR 353 Score = 53.5 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 60/113 (53%), Gaps = 6/113 (5%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 +I M++LM + N G++I+L T+ + L FPL KQ + + + P++ ++ Sbjct: 20 WIMNGMYILMEKVG--ITNVGLSIILFTIVIYALMFPLTYKQQKFSKLSQKMNPELQAVQ 77 Query: 401 EKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +K+K Q +Q Q+Y+ + ++P C +L+Q+P+ A+Y+V Sbjct: 78 KKYKDKKDTVSMQNMQTETQQIYEKYGVSPTGSCVQMLIQMPLLLALYRVFMN 130 >gi|224001854|ref|XP_002290599.1| cytochrome oxidase-like protein [Thalassiosira pseudonana CCMP1335] gi|220974021|gb|EED92351.1| cytochrome oxidase-like protein [Thalassiosira pseudonana CCMP1335] Length = 231 Score = 81.6 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 100/238 (42%), Gaps = 37/238 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + ++ + + +L+++ +++ + + I +TT+ +LL FP+ +++ M ++ Sbjct: 1 FEPTWWPSDQLLLLLNHVHDVYLPAYPYAVTIGVTTLAARLLLFPIYAAGQRNSSRMAHM 60 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 QP++ ++ + + P Q Q+ ++ L++ ++ NP+ G L P F ++ + Sbjct: 61 QPEMKKIMDATPKQPDQATQQKVMAQTRALWRKYDCNPMKGLVVPLASFPFFMGMFFGLK 120 Query: 449 ISLE----MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + + W DL ADP + I P++ + + + Sbjct: 121 KAPDYFPDLLSNGGLFWFTDLTQADP-------------------LMILPVLSAGTFLVM 161 Query: 505 MKMS---PPPADK----GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 +++ +D + + +V V + F + ++ YW +N ++ Q Sbjct: 162 TELTKDQMMSSDPVRGRNMVNAMRALAIVMVPLTAYFNSAVLCYWVTNNSFTMGQSLF 219 >gi|50557420|ref|XP_506118.1| YALI0F32021p [Yarrowia lipolytica] gi|49651988|emb|CAG78932.1| YALI0F32021p [Yarrowia lipolytica] Length = 388 Score = 81.6 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 87/229 (37%), Gaps = 34/229 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W + + L+ + + G A I TTV V++L FPL + M ++P++ Sbjct: 100 WSLWPSDIYLNLLEHVHVYTGLPWWAAIASTTVIVRVLLFPLFVQAANEQGKMSEVKPEL 159 Query: 397 DELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 + + EK K + Q++ ++ K + I+ + + + P+ I+ I E Sbjct: 160 NVIDEKLKSAANMTEMQMVAHEKKKILKKYGISQMK-LFYPMAMFPLTIGIFLGIRRMCE 218 Query: 453 MRH-----APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + W ++LAA DP +I + +++ Sbjct: 219 IGGVQGLSTEGVLWFQNLAAPDPYLG-------------------LQVITAAMYMASIRL 259 Query: 508 SPPPA----DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 G IL W P + V L PA L++++ + ++ ++Q Sbjct: 260 GSETGTNNLSPGMKKILQWAPWISVPFLMKMPAALLLHFFVNGILMLIQ 308 >gi|227873164|ref|ZP_03991455.1| inner membrane insertion protein [Oribacterium sinus F0268] gi|227840995|gb|EEJ51334.1| inner membrane insertion protein [Oribacterium sinus F0268] Length = 442 Score = 81.6 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 15/121 (12%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMF----IQMKMSPPPA----DKGQAMI--LN-W 522 L Y + PI+ LS + + K + P A D+ Q M+ +N Sbjct: 247 LNLSTAPSAYGFTPNIYWLIPILAGLSQWASTLLMQKQTMPTATEEGDQSQQMMKSMNVM 306 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL----IDRLRSTFSKNY 578 MP++ V+ SF +G+ +YW S+V ++QQ ++ G + ++ + Sbjct: 307 MPLMSVWFCFSFASGIGLYWIASSVFMLLQQLILNWYFGKKTNEELLQDAMAKANEKRAK 366 Query: 579 N 579 Sbjct: 367 K 367 Score = 55.4 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 4/139 (2%) Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374 I + +P F + + ++ + + N G+AI+L T+ ++L Sbjct: 3 QNLIILTKNTSNLPLFGPIWNLIVSALGWIMNWIYLFLDGIGIPNIGLAIILFTLVTRIL 62 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGC 430 FP + KQ S+ M+ +QP+I ++EK+K Q M +Y+ + + AGC Sbjct: 63 LFPTSLKQQKSSRMMQIMQPEIRAVQEKYKNKTDNASMMAQQTEMKAIYEKYGTSMTAGC 122 Query: 431 WPILLQIPVFFAIYKVISI 449 P+ LQ+P+ FA+Y++I Sbjct: 123 LPLFLQMPIIFALYRIIMN 141 >gi|325685786|gb|EGD27859.1| membrane protein OxaA 2 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 320 Score = 81.6 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 93/268 (34%), Gaps = 39/268 (14%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYV 384 G +Y+I + + + + + + + G AI++ T+ V+++ PL Q Sbjct: 35 KAPTSGPYYWIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLVVRVILMPLMLSQQH 94 Query: 385 STANMKNIQPKIDELREK---------FKQSPPQVLQKAMIQLYKTHNINPL--AGCWPI 433 + + + L ++Y +N++ GC P+ Sbjct: 95 KATLQQEKMHLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPL 154 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+ IY+ ++ S + + F+G + + I Sbjct: 155 LIQMPIMIGIYQAVAYSNALAKSTFFG-------------------ISLSSKSMVLAIIA 195 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + + ++ M P K + P++ F SF L +YW+ N++ ++QQ Sbjct: 196 TVFALIQSYVAMIGIPEEQKKTMQATMLMNPIMTFFFSMSFSGALALYWAVGNLVMVIQQ 255 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + R+ + + Sbjct: 256 LITT--FIVQPRAKKRVSKELEDSPIVE 281 >gi|330719323|ref|ZP_08313923.1| preprotein translocase subunit YidC [Leuconostoc fallax KCTC 3537] Length = 313 Score = 81.2 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 98/282 (34%), Gaps = 35/282 (12%) Query: 313 KEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTV 369 K TI D+ + + +I P+ +M+ N V G AI++ T Sbjct: 5 KRVLTIIFVIFDIILITGGYDQHSRMYRWIGHPLADIMTSIANFVGGTNGIGWAIIIITA 64 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKT 421 ++L+ P Q ++ + ++ R+ Q Q AM+ LY+ Sbjct: 65 VLRLILLPFFLNQQKASTINQIKMQQLKPEIDKLQAITRKAGTQQEQQQASMAMMSLYRE 124 Query: 422 HNINPLAG--CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 +N++ G + +Q+PVF +Y I S +R A F+G+ Sbjct: 125 NNVSLTGGISFLTMAMQVPVFSGLYSAILHSPSLRDATFFGF------------------ 166 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLI 539 + I +I ++ K P K + ++ P++ + Sbjct: 167 -NLNQSQIVFSVIAGLIYLAQAWLMAKHLPEEQRKASSAMMYISPIMIFAFSMYASGAIG 225 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +Y+ + + Q A+ H + +++ F ++ Sbjct: 226 LYFIVGGIFLLFQSAI---NHLQRPAMEEKVSKEFKVEKTAE 264 >gi|300813188|ref|ZP_07093562.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300495846|gb|EFK30994.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 320 Score = 81.2 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 94/268 (35%), Gaps = 39/268 (14%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYV 384 G +Y+I + + + + + + + G AI++ T+ V+++ PL Q Sbjct: 35 KAPTSGPYYWIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLGVRVILMPLMLSQQH 94 Query: 385 STANMKNIQPKIDELREK---------FKQSPPQVLQKAMIQLYKTHNINPL--AGCWPI 433 + + + L ++Y +N++ GC P+ Sbjct: 95 KATLQQEKMHLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPL 154 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+ IY+ ++ S + + F+G + + I Sbjct: 155 LIQMPIMIGIYQAVAYSNALAKSTFFG-------------------ISLSSKSMVLAIIA 195 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + + ++ M P K + P++ F SF L +YW+ N++ ++QQ Sbjct: 196 TVFALIQSYVAMIGIPEEQKKTMQATMLMNPIMTFFFSMSFSGALALYWAVGNLVMVIQQ 255 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + R+ + + + Sbjct: 256 LITT--FIVQPRAKKRVSKELADSPIVE 281 >gi|227549433|ref|ZP_03979482.1| inner membrane protein translocase component YidC [Corynebacterium lipophiloflavum DSM 44291] gi|227078510|gb|EEI16473.1| inner membrane protein translocase component YidC [Corynebacterium lipophiloflavum DSM 44291] Length = 325 Score = 81.2 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 116/308 (37%), Gaps = 65/308 (21%) Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ +++ + + +AI+ T +++L Q S Sbjct: 1 MLNFIYWPISAVLWFWHKIFGFIFAPDSGIAWILAIVFLTFTIRVLLVKPMVNQMRSMRR 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QPK+ E+R K+K Q + + +LYK NPLA C L+Q+PVF ++ V+ Sbjct: 61 MQEMQPKMQEIRAKYKG-DQQKMAQETQKLYKEMGTNPLASCIVPLVQMPVFIGLFHVLR 119 Query: 449 I-------------SLEM-RHAPFWGWIKD--------------LAAA--DPTNIFTLFG 478 S+E R+ + + + L+A P + F+ F Sbjct: 120 SFNRTGTGPGQLGMSVEQNRNTANYIFSPEDVRSFLDADFFGVPLSAYMSMPADAFSAFT 179 Query: 479 ILPFYLPGFMHVGI-WPIIMSLSMFIQMKMSPPPADKGQAM------------------- 518 L F + V + I+ ++ + ++S ++ +A Sbjct: 180 GLDFTRVDIILVCMPLVILSAVFTHLNARLSIERQNERRAAGKVAAPVGDQAEMMQQQMQ 239 Query: 519 -----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +L P++ + + + GL+ Y +NV + Q ++ E + + + Sbjct: 240 IMNKMMLWVFPIMILASGFLWHVGLLFYMLANNVWTFFQTRIVFDKMDKEEAMEEEQKRE 299 Query: 574 FSKNYNSQ 581 + Q Sbjct: 300 AKRATAPQ 307 >gi|329726436|gb|EGG62899.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU144] Length = 278 Score = 81.2 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 42/244 (17%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----IQPKIDELREKFKQSPPQVL 411 N+G AI+ + V+ + P Q + M+ +QP++D +R+K K + Q Sbjct: 50 FQDNYGFAIISIVLIVRFILLPFMLIQVKNMHMMREKTKVVQPELDAIRDKMKHATSQKE 109 Query: 412 QKAMIQL----YKTHNINP---LAGCWPILLQIPVFFAIYKVI--SISLEMRHAPFWGWI 462 + A QL Y+++ INP + GC P+L+Q+P+ +Y + S + P + W Sbjct: 110 RNAANQLLLKKYQSYGINPLKNMLGCLPVLIQMPILMGLYMSLKYPSSHGITEYPHFLWF 169 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM---- 518 DL D I II ++ F+Q ++ K Q Sbjct: 170 -DLTQPD---------------------LIMTIIAAIMYFVQPLVNSIHYPKDQRKTYYF 207 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID--RLRSTFSK 576 ++ + P+ +A A L +YWS S IVQ H ++ L + +L+ + Sbjct: 208 MMVFSPIFITYASLHSAAALGLYWSISAAFLIVQMHF-AHSHYKKVALHEAKKLKQKLEQ 266 Query: 577 NYNS 580 N ++ Sbjct: 267 NKDN 270 >gi|226326142|ref|ZP_03801660.1| hypothetical protein COPCOM_03961 [Coprococcus comes ATCC 27758] gi|225205684|gb|EEG88038.1| hypothetical protein COPCOM_03961 [Coprococcus comes ATCC 27758] Length = 423 Score = 81.2 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 12/115 (10%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-------PADKGQAMILNWM----PVV 526 G+ + + P++ LS ++ +K+S P A + M P+V Sbjct: 241 GVKAGAWGIVIMAVLIPVLSGLSQYLSVKLSQQTTAVTNNPQADQMASTMKTMNVTLPLV 300 Query: 527 FVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 VF + P GL IYW S V+ +VQQ I K H +I + + ++ K + Sbjct: 301 SVFMCFTLPTGLGIYWVASAVVRMVQQFFINK-HLNKIPMDELIKENMEKAAEKR 354 Score = 54.2 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 4/97 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + N G+ I+L T+ + L PL KQ + + P++ ++++K+K Q + M Sbjct: 37 IHNLGVCIILLTIVIYTLLMPLTIKQQKFSKMSAAMNPELQKVQQKYKGKNDQASMQKMQ 96 Query: 417 Q----LYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +Y+ + ++P GC + +Q P+ +A+Y VI Sbjct: 97 EETQLVYEKYGVSPTGGCLSMFIQFPILWAMYYVIRN 133 >gi|260437685|ref|ZP_05791501.1| inner membrane protein OxaA [Butyrivibrio crossotus DSM 2876] gi|292809911|gb|EFF69116.1| inner membrane protein OxaA [Butyrivibrio crossotus DSM 2876] Length = 415 Score = 81.2 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 64/333 (19%), Positives = 117/333 (35%), Gaps = 84/333 (25%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNL------VGNFGIAIMLTTVFVKLLFFPLAKKQ 382 F I W ++ + V GI+++L T+ V+L+ P+ KQ Sbjct: 9 GFLKPIAWLLGQIFNGLFNLIYNIAEWFTDKPYHVPIIGISVILFTIIVRLILLPMTIKQ 68 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIP 438 + + P++ E++ K+K Q +Q +Y+ + +P GC +L+Q+P Sbjct: 69 QKFSKLSGLMNPELQEIQAKYKDKRDQVSMMNMQAETKAVYEKYGTSPTGGCLTMLIQLP 128 Query: 439 VFFAIYKV--------------------------------------ISISLEMRHAPFWG 460 + FA+Y+V IS+S A Sbjct: 129 IMFALYRVIYKIPGYVTKIRELCGGIADKITGSGDDWATKLDAINGISVSASTGKATLID 188 Query: 461 WIKDLA------------------AADPTN-IFTLFGILPFYLPGF--MHVGIWPIIMSL 499 I +L+ A D + LFGI PG+ I PI+ L Sbjct: 189 KIYNLSPEKWSEVQNAFSSVDFGNAYDQIHGYNNLFGISLTQAPGWRLSWALIIPILAGL 248 Query: 500 SMFIQMKMS-------------PPPADKGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWS 545 + ++ +K+ ++ MP++ SF + + +YW S Sbjct: 249 TQWLSVKLMENKNNVNVGSQNDQQAGMASSMKVMNTIMPILSAVFCVSFASCIGLYWIAS 308 Query: 546 NVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 +V+ IV Q VI K + + + ++ K Sbjct: 309 SVVQIVVQLVINKKMNNK-DVDEIVKENIEKAN 340 >gi|42519505|ref|NP_965435.1| hypothetical protein LJ1629 [Lactobacillus johnsonii NCC 533] gi|41583793|gb|AAS09401.1| hypothetical protein LJ_1629 [Lactobacillus johnsonii NCC 533] Length = 327 Score = 81.2 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 99/258 (38%), Gaps = 32/258 (12%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + F + + + + + G AI++ T V+L+ PL + Sbjct: 40 YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 392 ----IQPKIDELREKFKQS-----PPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 +QP++ ++E K+ + + +++YK +N++ + GC P+L+Q+P+ Sbjct: 100 KTQKLQPQMRLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S E+ + F+G + + I ++ + Sbjct: 160 MGIYQAVAYSKELAASSFFG-------------------ISLGQRSIILTIIATLLYVVQ 200 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ M P K M L P + F S P L +Y+ +I+I+QQ + Sbjct: 201 GYLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLITT--F 258 Query: 561 GAEIGLIDRLRSTFSKNY 578 + + + S+ Sbjct: 259 VIMPKVKRDVAAELSERP 276 >gi|222624078|gb|EEE58210.1| hypothetical protein OsJ_09169 [Oryza sativa Japonica Group] Length = 407 Score = 81.2 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 87/267 (32%), Gaps = 54/267 (20%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 P F +A ++ N+ I LT++ ++ L PL Q +T Sbjct: 91 FPGEVAAAAADSFAPVAALQHLIDGVHSLTGLNWWACIALTSLLIRTLTVPLLLNQMKAT 150 Query: 387 ANMKNIQPKIDELR------------------EKFKQSPPQVLQKAMI--------QLYK 420 + ++P+I+ + + + +L+ Sbjct: 151 VKLNAMRPEIEAINLEMRTISSTRIAGNEKSSTRVTDEGSMSTDPQSMLEGKRKLGELFL 210 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLE---MRHAPFWGWIKDLAAADPTNIFTLF 477 H + PL + +Q P+F + + IS +E W DL D Sbjct: 211 RHGVTPLTPLKGLFIQAPIFMSFFFAISNMVEKVPSFKGGGIYWFTDLTTPD-------- 262 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP------PADKGQAMILNWMPVVFVFAL 531 + I P++ SL+ + ++++ P K M V+ + Sbjct: 263 -----------ELLILPMLTSLTFLVTVELNMQDGMEGNPMLKTMKNFSRVMAVLTIPFT 311 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMK 558 SFP + YW SN+ S+ V+ K Sbjct: 312 MSFPKAIFFYWVTSNLFSLGYGFVLRK 338 >gi|55726011|emb|CAH89782.1| hypothetical protein [Pongo abelii] Length = 459 Score = 81.2 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 83/251 (33%), Gaps = 56/251 (22%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 Y + L+ + + +L + AI TVF + L FPL A + + P+I Sbjct: 122 SYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVTGQREAARIHSHLPEIQ 181 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ + K H I + Q P+F + + + Sbjct: 182 KFSSRIREAKLAGDHIEYYKASSEMAFYQKKHGIKLYKPLILPVTQAPIFISFFIALREM 241 Query: 451 LEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + W +DL +DP + I P+ ++ +M+ ++ Sbjct: 242 ANLPVPSLQTGGLWWFQDLTVSDP-------------------IYILPLAVTATMWAVLE 282 Query: 507 MSPPPADKG-----QAMILNWMPVVFVFALSSFP--------------------AGLIIY 541 + + ++ MP++ + P +G +Y Sbjct: 283 LGAETGVQSSDLQWMRNVIRVMPLITLPITMHSPRQCLCTGSPPICFPWSKYPVSGFQMY 342 Query: 542 WSWSNVISIVQ 552 W SN+ S+VQ Sbjct: 343 WLSSNLFSLVQ 353 >gi|229816221|ref|ZP_04446531.1| hypothetical protein COLINT_03271 [Collinsella intestinalis DSM 13280] gi|229808229|gb|EEP44021.1| hypothetical protein COLINT_03271 [Collinsella intestinalis DSM 13280] Length = 279 Score = 81.2 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 111/246 (45%), Gaps = 10/246 (4%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + + +I + +F + G++G++I++ V ++LL P+ K STA M+ Sbjct: 15 KVRIIRMWDWIVQILFQALELIQRFAGDWGLSIIILVVIIRLLLTPMMLKSIKSTARMQV 74 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-- 449 +QPK+ E++E++ + PQ + + + Y + NP GC P+L+Q+P+ A++ ++ Sbjct: 75 LQPKLLEIQERYA-ADPQRQAEELQKFYSENKFNPFGGCLPLLIQMPILVALFNLLRDLG 133 Query: 450 ----SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + F+ + +L + FG YL + G+ I M++ Sbjct: 134 HYFPDAAEKGFSFFNILPNLVTSPAQAFADGFGAALPYLIALILFGVLTFI--PQMYMTR 191 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 + M++ M V+ + PAG+++Y+ S+ +VQQ + + + Sbjct: 192 NQTGAQVQST-KMMMVVMTVMMLVMGWGMPAGVLLYYDVSSAWQVVQQIFVTQKVIDKAK 250 Query: 566 LIDRLR 571 + R Sbjct: 251 AEEEAR 256 >gi|58268112|ref|XP_571212.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|57227446|gb|AAW43905.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 462 Score = 81.2 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 94/291 (32%), Gaps = 32/291 (10%) Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMF 347 + G L +G ++ E A + L G+ + Sbjct: 73 PQPPADAGAPTLEDLILHSGKSVQDVLNSEEAVHAAMKLSDLKLIGYDHGILSVTGWFTD 132 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS-------TANMKNIQPKIDELR 400 L++ L + AI TTV ++L L ++ + + Sbjct: 133 GLVALHTELGLPWWAAIAGTTVLIRLCLTRLVVNTQKHSVRLAAVNPQIQELMAEAKVAS 192 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHA 456 ++ + + L K HN+NPL L+Q+P+F + ++ + Sbjct: 193 ANKDTHMQTLISQRLRDLMKEHNVNPLRPLLLPLVQMPIFLTFFSIVRGLANLPLPQLKE 252 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG- 515 GW+ DL AADP I +L L P SP Sbjct: 253 GGLGWVTDLTAADPYYILPATSLLFTNLVFKFGADGVPTAAKAG-------SPMTTAHMR 305 Query: 516 ---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q P++ FP+ L+ YW++S +++Q +I++ + Sbjct: 306 NFIQLTTFLSFPLIM-----YFPSALLFYWTFSTGFTLLQS-IILRQPIVK 350 >gi|134112063|ref|XP_775567.1| hypothetical protein CNBE2810 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258226|gb|EAL20920.1| hypothetical protein CNBE2810 [Cryptococcus neoformans var. neoformans B-3501A] Length = 463 Score = 81.2 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 94/291 (32%), Gaps = 32/291 (10%) Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY----FIAKPMF 347 + G L +G ++ E A + L G+ + Sbjct: 74 PQPPADAGAPTLEDLILHSGKSVQDVLNSEEAVHAAMKLSDLKLIGYDHGILSVTGWFTD 133 Query: 348 MLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS-------TANMKNIQPKIDELR 400 L++ L + AI TTV ++L L ++ + + Sbjct: 134 GLVALHTELGLPWWAAIAGTTVLIRLCLTRLVVNTQKHSVRLAAVNPQIQELMAEAKVAS 193 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHA 456 ++ + + L K HN+NPL L+Q+P+F + ++ + Sbjct: 194 ANKDTHMQTLISQRLRDLMKEHNVNPLRPLLLPLVQMPIFLTFFSIVRGLANLPLPQLKE 253 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG- 515 GW+ DL AADP I +L L P SP Sbjct: 254 GGLGWVTDLTAADPYYILPATSLLFTNLVFKFGADGVPTAAKAG-------SPMTTAHMR 306 Query: 516 ---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 Q P++ FP+ L+ YW++S +++Q +I++ + Sbjct: 307 NFIQLTTFLSFPLIM-----YFPSALLFYWTFSTGFTLLQS-IILRQPIVK 351 >gi|330723621|gb|AEC45991.1| putative inner membrane protein translocase component YidC [Mycoplasma hyorhinis MCLD] Length = 612 Score = 80.8 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 64/483 (13%), Positives = 136/483 (28%), Gaps = 31/483 (6%) Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + SN Y + + + + N E + + K + + + Sbjct: 125 NTSNNYGQYSSLIMFHNADNTFEYAKGDKTHEFLFLNSAESKYDPKFNWTDIKLPSPKFF 184 Query: 172 ISLDEHY--LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 + + Y F+ N + + P ++ + Sbjct: 185 ALVGDKYAEEFQKTQLAVNPILQNQGNFFYTVSNQADPTNEKYFNFSRDIIQYLYNKTMN 244 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 +E + + S N K + + S Sbjct: 245 IEGFKTKLIPSINVLESYKNEADFEKIKKELQASNDPVKKEALQVLQDYSTLAKTVLIPT 304 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 +I + N + I P W F + +F L Sbjct: 305 RFTQIDPVNNTYSFAYNLNDNDYYNYEGIAFRSDYPNNPIVTWSDSWKLGPFYSLIVFPL 364 Query: 350 MSY----------FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + AI++ + K++ F K + +Q K ++ Sbjct: 365 SKIILGVSESQSIWELNGWTTIFAIIVVVLLTKIISFIFRFKTIFGQSKQIEMQAKKAKI 424 Query: 400 REKFKQSP-----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 K++ Q ++ + LYK +N +P A +L+ +P+F A+++VI ++ Sbjct: 425 DAKYEPYKKNKMMQQRHRQEVADLYKKNNFSPFAPFSQVLVTMPIFIAVWRVIQGIPSLK 484 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK-------M 507 + G L A + G+ + + V + + L ++ K Sbjct: 485 VTYWVG----LELASISYQKLFEGLWQYLPILIIVVLVQAVQQLLPKYLNKKNTNRIMNQ 540 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA---VIMKMHGAEI 564 + K Q + +VF+F F A L IYW + I Q + + + Sbjct: 541 NESETMKKQQKTQRIISIVFIFFGVLFQASLQIYWIIGGLWEIGQTLGVHYLQRSTFFKE 600 Query: 565 GLI 567 + Sbjct: 601 KMR 603 >gi|329667744|gb|AEB93692.1| putative membrane protein [Lactobacillus johnsonii DPC 6026] Length = 327 Score = 80.8 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 94/258 (36%), Gaps = 32/258 (12%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + F + + + + + G AI++ T V+L+ PL + Sbjct: 40 YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 392 IQPKIDELREKFKQ---------SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 K+ + ++ + + +++YK +N++ + GC P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S E+ + F+G + + I ++ + Sbjct: 160 MGIYQAVAYSKELAASSFFG-------------------ISLGQRSIILTIIATLLYVVQ 200 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ M P K M L P + F S P L +Y+ +I+I+QQ + Sbjct: 201 GYLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLITT--F 258 Query: 561 GAEIGLIDRLRSTFSKNY 578 + + + ++ Sbjct: 259 VIMPKVKRDVAAELNERP 276 >gi|227485753|ref|ZP_03916069.1| inner membrane insertion protein [Anaerococcus lactolyticus ATCC 51172] gi|227236308|gb|EEI86323.1| inner membrane insertion protein [Anaerococcus lactolyticus ATCC 51172] Length = 236 Score = 80.8 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 54/207 (26%), Positives = 101/207 (48%), Gaps = 25/207 (12%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + IAI++ T+ V L+ P+ ++ +PK+DE+++K+ QVLQK M +LY Sbjct: 33 YAIAIIIMTLLVSLISIPVTISTQKQAEKTRSFKPKMDEIQKKY-GYDQQVLQKKMQELY 91 Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISIS------LEMRH-APFWGWIKDLAAADPT 471 K + P L+GC P+++Q+ V F +++++ + + H + W+ DL ADP Sbjct: 92 KQEGVTPGLSGCLPMIIQLLVLFGLFEMMRNTGKYVFPEGLNHIRTDFYWVPDLLKADPL 151 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWMPVVFVF 529 FG+ + ++ I K +P +M ++ +P+VF F Sbjct: 152 ----WFGLPLLTSLSQLLTTLFSI----------KTNPQQQQAMGSMNTMMLVLPLVFFF 197 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 PAGL +Y++ S+V ++ V+ Sbjct: 198 TFRQLPAGLPLYYTLSSVFRLLIMVVM 224 >gi|227500990|ref|ZP_03931039.1| sporulation associated-membrane protein [Anaerococcus tetradius ATCC 35098] gi|227216763|gb|EEI82161.1| sporulation associated-membrane protein [Anaerococcus tetradius ATCC 35098] Length = 244 Score = 80.8 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 36/227 (15%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + IAI++ T+ V LL P+ Q K +PK++E+++K+ Q++QK M QLY Sbjct: 33 YAIAIIIMTLLVSLLIIPMTVSQQKQAERTKIFKPKMEEIQKKYS-YDQQIMQKKMQQLY 91 Query: 420 KTHNINP-LAGCWPILLQIPVFFAIYKVISISLEM-------RHAPFWGWIKDLAAADPT 471 K + P ++GC +++QI + F +++++ + + + WI +L DP Sbjct: 92 KEEGVTPGISGCLVMIIQIMILFGLFRMMGDTTKYVFPEGLDNVRTNFYWISNLLDKDPY 151 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--------MILNWM 523 P++ SLS S + Q + M Sbjct: 152 WF------------------ALPLLTSLSQVAVQLFSMKTNPQMQQGGAMGNMNNMFLIM 193 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA-EIGLIDR 569 P+++ F PAGL +Y++ S+V +V ++ A + L D Sbjct: 194 PLMYFFIFRGLPAGLPLYYTLSSVFRLVIMVIMHFYMKANKTELEDE 240 >gi|304373458|ref|YP_003856667.1| Membrane protein oxaA [Mycoplasma hyorhinis HUB-1] gi|304309649|gb|ADM22129.1| Membrane protein oxaA [Mycoplasma hyorhinis HUB-1] Length = 612 Score = 80.8 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 68/486 (13%), Positives = 146/486 (30%), Gaps = 37/486 (7%) Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + SN Y + + + + N E + + K + + + Sbjct: 125 NTSNNYGQYSSLIMFHNADNTFEYAKGDKTHEFLFLNSAESKYDPKFNWTDIKLPSPKFF 184 Query: 172 ISLDEHY--LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 + + Y F+ N + + ++ T F I L +K++ Sbjct: 185 ALVGDKYAEEFQKTQLAVNPILQNQG-NFFYKVSNQADPTNEKYFNFSRDIIQYLYNKTM 243 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISD--KYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 + + SI+ + K + P K+ + Y + Sbjct: 244 NIEGFKTKLIPSINVLESYKNEADFEKIKKELQASNDPVKKEALQVLQDYSTLAKTVLIP 303 Query: 288 KFSANEITILPGKSITTTNFLF-AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + + L + I P W F + + Sbjct: 304 --TRFTQIDPVNNTYSFAYNLNDNDYYNYEGIAFRSDYPNNPIVTWSDSWKLGPFYSLIV 361 Query: 347 FMLMSY----------FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 F L + AI++ + K++ F K + +Q K Sbjct: 362 FPLSKIILGVSESQSIWELNGWTTIFAIIVVVLLTKIISFIFRFKTIFGQSKQIEMQAKK 421 Query: 397 DELREKFKQSP-----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 ++ K++ Q ++ + LYK +N +P A +L+ +P+F A+++VI Sbjct: 422 AKIDAKYEPYKKNKMMQQRHRQEVADLYKKNNFSPFAPFSQVLVTMPIFIAVWRVIQGIP 481 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK----- 506 ++ + G L A + G+ + + V + + L ++ K Sbjct: 482 SLKVTYWVG----LELASISYQKLFEGLWQYLPILIIVVLVQAVQQLLPKYLNKKNTNRI 537 Query: 507 --MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA---VIMKMHG 561 + K Q + +VF+F F A L IYW + I Q + + Sbjct: 538 MNQNESETMKKQQKTQRIISIVFIFFGVLFQASLQIYWIIGGLWEIGQTLGVHYLQRSTL 597 Query: 562 AEIGLI 567 + + Sbjct: 598 FKEKMR 603 >gi|293363973|ref|ZP_06610709.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma alligatoris A21JP2] gi|292552463|gb|EFF41237.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma alligatoris A21JP2] Length = 610 Score = 80.8 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 102/272 (37%), Gaps = 35/272 (12%) Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 + L + E I + + + F LI + Y + I ++ Sbjct: 336 SKLAYSSVEQKPITSWGESWGLGPFYGLIVYPISYVSQHLRQAFPAMAGWETIFVIIIVV 395 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV--LQKAMIQLYKTHN 423 + L+ + +++ + +I+ + F + Q+ + +LYK HN Sbjct: 396 IVIKTFSLIVTFKSIVGQSIQEDLRGKKAQIEAKYKDFANNKMMKARKQQELQKLYKKHN 455 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 INPL I++ +PVFFA+++VI E++ + G F+ + Sbjct: 456 INPLDQFLSIIISMPVFFAMWRVIQCMPEIKSTVWLG-----------LNFSSTSYQSLF 504 Query: 484 LPGFMHVGIWPIIMSL---SMFIQMKMSP---------------PPADKGQAMILNWMPV 525 + ++GI + + + S + ++ ++K Q +I+ + Sbjct: 505 AGQWQYLGIIIVALGVQLASQLLPRLLNKKRLKERISIAENDALKKSEKTQKIIM----L 560 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 VF+ F AG+ +YW + + ++ Q I Sbjct: 561 VFLVITVIFTAGVQVYWIITGLWTVGQTIGIY 592 >gi|319400148|gb|EFV88383.1| 60Kd inner membrane family protein [Staphylococcus epidermidis FRI909] Length = 278 Score = 80.8 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 88/243 (36%), Gaps = 40/243 (16%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E ++ K M + + N+G AI+ + V+ + P Q + M Sbjct: 24 EENQTGIFYNVFVKSMDEFLHFLGKVFQDNYGFAIISIVLIVRFILLPFMLIQVKNMHMM 83 Query: 390 KNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIP 438 + + ++ Q + +++ Y+++ INP + GC P+L+Q+P Sbjct: 84 REKTKVVQPELDAIRDKIKHATSQEERNAANQLLLKKYQSYGINPLKNMLGCLPVLIQMP 143 Query: 439 VFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 + +Y + S + P + W DL D I II Sbjct: 144 ILMGLYMSLKYPSSHGITEYPHFLWF-DLTQPD---------------------LIMTII 181 Query: 497 MSLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ F+Q ++ K Q ++ + P+ +A A L +YWS S IVQ Sbjct: 182 AAIMYFVQPLVNSIHYPKDQRKTYYFMMVFSPIFITYASLHSAAALGLYWSISAAFLIVQ 241 Query: 553 QAV 555 Sbjct: 242 MHF 244 >gi|242243775|ref|ZP_04798219.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis W23144] gi|242232778|gb|EES35090.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis W23144] Length = 278 Score = 80.8 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 100/270 (37%), Gaps = 43/270 (15%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E ++ K M + + N+G AI+ + V+ + P Q + M Sbjct: 24 EENQTGIFYNVFVKSMDEFLHFLGRVFQDNYGFAIISIVLIVRFILLPFMLIQVKNMHMM 83 Query: 390 KNIQPKIDE--------LREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIP 438 + + ++ Q + +++ Y+++ INP + GC P+L+Q+P Sbjct: 84 REKTKVVQPELDAIRDKMKHATSQEERNAANQLLLKKYQSYGINPLKNMLGCLPVLIQMP 143 Query: 439 VFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 + +Y + S + P + W DL D I II Sbjct: 144 ILMGLYMSLKYPSSHGITEYPHFLWF-DLTQPD---------------------LIMTII 181 Query: 497 MSLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ F+Q ++ K Q ++ + P+ +A A L +YWS S IVQ Sbjct: 182 AAIMYFVQPLVNSIHYPKDQRKTYYFMMVFSPIFITYASLHSAAALGLYWSISAAFLIVQ 241 Query: 553 QAVIMKMHGAEIGLID--RLRSTFSKNYNS 580 H ++ L + +L+ F + ++ Sbjct: 242 MHF-AHSHYKKVALHEAKKLKQKFEHHKDN 270 >gi|238854473|ref|ZP_04644812.1| preprotein translocase subunit YidC [Lactobacillus jensenii 269-3] gi|260665479|ref|ZP_05866326.1| preprotein translocase subunit YidC [Lactobacillus jensenii SJ-7A-US] gi|238832900|gb|EEQ25198.1| preprotein translocase subunit YidC [Lactobacillus jensenii 269-3] gi|260560747|gb|EEX26724.1| preprotein translocase subunit YidC [Lactobacillus jensenii SJ-7A-US] Length = 322 Score = 80.8 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 97/254 (38%), Gaps = 32/254 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK----- 390 + + + + + G AI + T ++ + PL + + Sbjct: 44 YQFIGIPIRNIMLATENAIGGSNGAGWAIAIITAVIRFVLLPLMLSTSKKSTIQQEKVSR 103 Query: 391 ---NIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIY 444 + D L+++ Q+ + ++Y+ +N++ GC P+L+Q P IY Sbjct: 104 LQDQFKLIQDALKDRSLTPDKQMQISQLQQKVYRENNLSITGGIGCLPLLVQFPFMIGIY 163 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + ++ S + + F+G ++ P+ +F + G L + + + +S Q Sbjct: 164 QAVAYSDALYKSNFFG----VSLGKPSLLFAIVGALFYLAQSLLMLR------GVS--EQ 211 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + Q+ + P++ +F S P L +Y+ +I+++QQ ++ + Sbjct: 212 QR------AAMQSTVF-ISPLMTLFISMSTPGALGLYFLVGGIIALIQQVIVT--YIILP 262 Query: 565 GLIDRLRSTFSKNY 578 ++ + + Sbjct: 263 RAKAKIDAELKEKP 276 >gi|160882061|ref|YP_001561029.1| 60 kDa inner membrane insertion protein [Clostridium phytofermentans ISDg] gi|160430727|gb|ABX44290.1| 60 kDa inner membrane insertion protein [Clostridium phytofermentans ISDg] Length = 442 Score = 80.4 bits (196), Expect = 7e-13, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 12/114 (10%) Query: 479 ILPFYLPGFMHVGIW-PIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVF 527 + PGF GI P+ + S F Q K+ P + + MPVV Sbjct: 257 LNILDAPGFTFPGILIPLAAAGSQFAQSKLMMTATPQSTSDDTPGAQSLKTMNTVMPVVS 316 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + P G+ IYW S+V+ I+QQ I K + +I + D + + +K+ + Sbjct: 317 GIFCTFLPIGVGIYWIASSVVQILQQIFINK-YLDKIDIDDMIAKSVAKSSKRK 369 Score = 54.6 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 9/126 (7%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVG-----NFGIAIMLTTVFVKLLFFPLAKKQYVST 386 + G A M ++++ Y + N I I++ T +K+L PL KQ T Sbjct: 6 LTQVTGILGPFAWVMGIILNGIYEFLSIFGMANIAICIVIFTFVIKMLMLPLTIKQQKGT 65 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFA 442 + P+I +++ K+K Q + M ++Y + +PL+GC P+L+ +P+ FA Sbjct: 66 RLSAKMNPEIQKVQAKYKGKKDQASMQKQQAEMQEIYAKYGASPLSGCLPLLISLPIMFA 125 Query: 443 IYKVIS 448 +Y+VI Sbjct: 126 LYRVIY 131 >gi|167755168|ref|ZP_02427295.1| hypothetical protein CLORAM_00673 [Clostridium ramosum DSM 1402] gi|237733408|ref|ZP_04563889.1| membrane protein [Mollicutes bacterium D7] gi|167705218|gb|EDS19797.1| hypothetical protein CLORAM_00673 [Clostridium ramosum DSM 1402] gi|229383443|gb|EEO33534.1| membrane protein [Coprobacillus sp. D7] Length = 298 Score = 80.4 bits (196), Expect = 7e-13, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 105/228 (46%), Gaps = 14/228 (6%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + P+ + + + VGN ++ T+ V ++ P+ K VST M+ +QP+++ Sbjct: 55 FDFIFVIPLAKGILFINDYVGNVAFGVIGVTIIVNIITLPIMIKSTVSTQKMQLLQPEME 114 Query: 398 ELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +++ K+K Q + LYK +N++ + G + L +P+ FA+++ + + Sbjct: 115 KIQRKYKGRKDQASQMRQNAEIQNLYKKNNVS-MFGSFATFLTLPIMFAMWQAVQRIDIL 173 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 +G +L A ++I L + + + + G M ++ I K SP Sbjct: 174 YSTYIFG--INLGAKPISHIMDLD--IAYIVLLVLVAGTQFFAMQITQ-IMAKRSPKYRP 228 Query: 514 KGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 Q +N M + V+ ++ PA + +YW +NVI+I++ I Sbjct: 229 SQQMKSMNTMNNVMTIFIVYLAATMPAAMSLYWITTNVINIIRTVYIQ 276 >gi|323342260|ref|ZP_08082492.1| hypothetical protein HMPREF0357_10673 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463372|gb|EFY08566.1| hypothetical protein HMPREF0357_10673 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 280 Score = 80.4 bits (196), Expect = 7e-13, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 91/265 (34%), Gaps = 32/265 (12%) Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 I WG + ++ N + I V ++ Sbjct: 28 TKQVYADKIISLGDSWTWGSDTWFGALFVWPIAQALNFFSQYVGTIGSIVVVTLIIKIIT 87 Query: 379 AKKQYVSTANMKNIQ---PKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAGCW 431 K +T + +Q P+ + K++ Q + M +L++ H INP+ Sbjct: 88 IKGSIKATVQQQKMQLIGPEQARIEAKYQGRNDQQAKLQKATEMQKLFEKHEINPMGALG 147 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 LQ+P+ A+Y+ + S + + +G +L + I F Sbjct: 148 GTFLQLPIMIAMYQAVMRSEAIINGTVFGQTLELTPMQGFTQGNIIIIGIFI-------- 199 Query: 492 IWPIIMSLSMFIQM------------KMSPPPADKGQAMILNWMP-VVFVFALSSFPAGL 538 +M+LS F+ M K S QA ++ + ++ V ++ G+ Sbjct: 200 ----LMALSQFLSMFLPQYLAKQKIRKRSYEKQPANQANMMMYSSLIMIVVLALNWQVGM 255 Query: 539 IIYWSWSNVISIVQQAVIMKMHGAE 563 +YW S + +VQ I +GA+ Sbjct: 256 SLYWMVSALAQLVQTLFINHKYGAK 280 >gi|50290205|ref|XP_447534.1| hypothetical protein [Candida glabrata CBS 138] gi|49526844|emb|CAG60471.1| unnamed protein product [Candida glabrata] Length = 386 Score = 80.4 bits (196), Expect = 7e-13, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 81/245 (33%), Gaps = 25/245 (10%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQ 382 + E + +Y+ + + + Y + G I+ T+ V+L PL K Sbjct: 80 STHVGYLESIGLAQTWYWPSDLVQHALEYVHAYSGLPWWGTIITVTLLVRLALVPLYVKS 139 Query: 383 YVSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 + A I+P++D++ ++ + Q + +L + I ++QIP Sbjct: 140 SDTIARNSRIKPELDKINKQLMGTTDMTEGQKVAMKRKKLLADNGIKNRW-LAAPMVQIP 198 Query: 439 VFFAIYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 + + I ++ W DL ADP G+ + Sbjct: 199 MAIGFFNGIRHMANFPVQGFQDQGILWFNDLTQADPY-----LGLQVITAAVLISFTRLG 253 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 F MP++ + A + + +++Y++ + S++Q Sbjct: 254 GETGAQQF----------SPTMKKFFTIMPLLSIPATMNLSSAVVLYFAVNGSFSVLQTL 303 Query: 555 VIMKM 559 + Sbjct: 304 FLRNK 308 >gi|299116044|emb|CBN74460.1| Oxa1 or Cox18/Oxa2 homolog, mitochondrial integral inner membrane protein [Ectocarpus siliculosus] Length = 411 Score = 80.4 bits (196), Expect = 7e-13, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 79/246 (32%), Gaps = 35/246 (14%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + M + + + I+ TV ++ P+ + A + Sbjct: 51 TFKMALYTPPQVAMMAVDYVHATTGMPYWMTIVAITVGIRTAILPIGLLAARNGARTAAM 110 Query: 393 QPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 +P++DEL+ K ++ L++ H + + ++Q+P+F + Sbjct: 111 KPEMDELQAAIKGDQQSSQPRKADRYRQETKALFQKHKASLVMNAALPIVQLPLFIGFFL 170 Query: 446 VISISLEMRHA---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 + ++ W +DL A DP IF P++ + M Sbjct: 171 GLRRMPDVVPEFATGGVLWFQDLGAPDPYMIF-------------------PVMTGVMMM 211 Query: 503 IQMKMSPPPADKG-----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 ++ + M ++ G+ +YW+ SN SI+Q Sbjct: 212 AMAELGGEGGALAGSSVKMKAGMRGMALLVTPLTMYVSTGVFVYWTTSNFYSILQTLA-F 270 Query: 558 KMHGAE 563 K G + Sbjct: 271 KSSGIK 276 >gi|81428992|ref|YP_395992.1| membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei 23K] gi|78610634|emb|CAI55685.1| Membrane protein chaperone oxaA [Lactobacillus sakei subsp. sakei 23K] Length = 329 Score = 80.4 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 93/264 (35%), Gaps = 39/264 (14%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F + + + + ++ F+ + +G AI++ T V+++ PL Q Sbjct: 38 GFIYGSSYKYIAVPLQHIMERIADFFGGINGYGWAIIIITFVVRMILLPLMLNQSNKMTA 97 Query: 389 MK--------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN--PLAGCWPILLQIP 438 + + + + L + M+++YK ++ + P GC +L+Q+P Sbjct: 98 QQEKTRRLKPQLDIVQAQQKVATTPEEKAELSQLMMKVYKENDSSMMPSLGCLTLLIQLP 157 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 +F +Y+ I S E+ + F+G + I II + Sbjct: 158 IFSGLYQAIQYSPEISSSHFFG-----------------------IGLGQPNIIITIIAT 194 Query: 499 LSMFIQMKMSPPPADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 L Q +S Q + P + F PAGL +Y+ +I I+QQ Sbjct: 195 LFYVGQSALSLVGMPAEQKKQMQTTVLMSPAITFFISLFAPAGLALYFLAGGMIMIIQQM 254 Query: 555 VIMKMHGAEIGLIDRLRSTFSKNY 578 + + R+ + Sbjct: 255 ITT--FIIMPRVKKRIDQEIKEKP 276 >gi|282934543|ref|ZP_06339795.1| putative membrane protein [Lactobacillus jensenii 208-1] gi|313471836|ref|ZP_07812328.1| membrane protein [Lactobacillus jensenii 1153] gi|281301381|gb|EFA93673.1| putative membrane protein [Lactobacillus jensenii 208-1] gi|313449008|gb|EEQ68251.2| membrane protein [Lactobacillus jensenii 1153] Length = 326 Score = 80.4 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 97/254 (38%), Gaps = 32/254 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK----- 390 + + + + + G AI + T ++ + PL + + Sbjct: 48 YQFIGIPIRNIMLATENAIGGSNGAGWAIAIITAVIRFVLLPLMLSTSKKSTIQQEKVSR 107 Query: 391 ---NIQPKIDELREKFKQSPPQVL-QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIY 444 + D L+++ Q+ + ++Y+ +N++ GC P+L+Q P IY Sbjct: 108 LQDQFKLIQDALKDRSLTPDKQMQISQLQQKVYRENNLSITGGIGCLPLLVQFPFMIGIY 167 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + ++ S + + F+G ++ P+ +F + G L + + + +S Q Sbjct: 168 QAVAYSDALYKSNFFG----VSLGKPSLLFAIVGALFYLAQSLLMLR------GVS--EQ 215 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + Q+ + P++ +F S P L +Y+ +I+++QQ ++ + Sbjct: 216 QR------AAMQSTVF-ISPLMTLFISMSTPGALGLYFLVGGIIALIQQVIVT--YIILP 266 Query: 565 GLIDRLRSTFSKNY 578 ++ + + Sbjct: 267 RAKAKIDAELKEKP 280 >gi|167957434|ref|ZP_02544508.1| putative inner membrane protein translocase component YidC [candidate division TM7 single-cell isolate TM7c] Length = 267 Score = 80.4 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 111/264 (42%), Gaps = 43/264 (16%) Query: 338 WFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + + +P+F L+ Y++V +FG+A+++ T+ ++++ +PL KQ M+ IQP+ Sbjct: 4 FDLIVVQPIFNLLMALYSIVPGGDFGVAVIIFTILIRIIMWPLISKQLHQVKIMRKIQPE 63 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 +D ++ K + Q+ M+++YK +NI+P L+Q+P+FF +Y+VI I R Sbjct: 64 LDRIK-KQAKGNRQMQGMMMLEVYKKYNISPFRSIGLTLIQLPIFFGLYRVIQIFTMHRG 122 Query: 456 A---------PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII------MSLS 500 + +L A LFG + + GI P++ + Sbjct: 123 DLGKYTYNLLENIPAVSNLIANPNNFNNKLFGFVDLTVQAIGKSGISPLLLALAIGAGIM 182 Query: 501 MFIQMKMSPPPAD-------------------------KGQAMILNWMPVVFVFALSSFP 535 +I K + P ++ +MP++ + + P Sbjct: 183 QYISSKQTMPQKQTKKGLRQIMAEAAEGKEADSSEMNAAVMQKMVKFMPIMLTLIMVNLP 242 Query: 536 AGLIIYWSWSNVISIVQQAVIMKM 559 + +Y +++VQQ K Sbjct: 243 GAIALYSCTFTAVAVVQQHFFAKK 266 >gi|219111225|ref|XP_002177364.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411899|gb|EEC51827.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 229 Score = 80.4 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 81/207 (39%), Gaps = 22/207 (10%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK------QSPPQVLQK 413 +G +I+ TV ++L FP+ +++ M ++QP++ +++ +++ + Sbjct: 12 YGWSIVGVTVILRLCLFPVMVASQQTSSRMAHLQPELQQIKARYEALGTPSRQDQLQFSG 71 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL----EMRHAPFWGWIKDLAAAD 469 M ++ + + P ++Q+P+F ++ + E W DL A+D Sbjct: 72 QMKAIFAKYKVKPFRAFAGPVIQMPLFMGMFFGLRKMPSIFPEELSTGGMYWFTDLTASD 131 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I L F + QM + M + V Sbjct: 132 PLYILPFTSALSFLALIELGKE------------QMVAQNAQSGHLMVNFFRVMSIGMVP 179 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVI 556 +F A ++ YW+ +N +++ Q A++ Sbjct: 180 VCVNFEAAMLCYWTSNNFMTLTQTAIL 206 >gi|116630024|ref|YP_815196.1| preprotein translocase subunit YidC [Lactobacillus gasseri ATCC 33323] gi|238853789|ref|ZP_04644155.1| preprotein translocase subunit YidC [Lactobacillus gasseri 202-4] gi|311110346|ref|ZP_07711743.1| membrane protein chaperone OxaA [Lactobacillus gasseri MV-22] gi|116095606|gb|ABJ60758.1| Preprotein translocase subunit YidC [Lactobacillus gasseri ATCC 33323] gi|238833598|gb|EEQ25869.1| preprotein translocase subunit YidC [Lactobacillus gasseri 202-4] gi|311065500|gb|EFQ45840.1| membrane protein chaperone OxaA [Lactobacillus gasseri MV-22] Length = 327 Score = 80.4 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 94/257 (36%), Gaps = 36/257 (14%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + F + + + + + G AI++ T V+L+ PL + Sbjct: 40 YAWVFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 392 IQPKIDELREKFKQ---------SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 K+ + ++ + + +++YK +N++ + GC P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKDNNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S E+ + F+G + + I ++ + Sbjct: 160 IGIYQAVAYSKELAASSFFG-------------------ISLGQRSIVLTIIATLLYVIQ 200 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ----AVI 556 ++ M P K M L P + F S P L +Y+ +I+I+QQ +I Sbjct: 201 GYLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQVITTFII 260 Query: 557 MKMHGAEIGLIDRLRST 573 M + + L Sbjct: 261 MPK--VKKDVAAELNER 275 >gi|45201239|ref|NP_986809.1| AGR143Wp [Ashbya gossypii ATCC 10895] gi|12003128|gb|AAG43464.1|AF195007_3 Yer154p [Eremothecium gossypii] gi|44986093|gb|AAS54633.1| AGR143Wp [Ashbya gossypii ATCC 10895] Length = 378 Score = 80.0 bits (195), Expect = 9e-13, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 90/253 (35%), Gaps = 28/253 (11%) Query: 320 HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPL 378 E I + + + + ++ + + G I +TTV V+ L FPL Sbjct: 69 AGEASNHIGYLASINMADSWLWPTGLLQNILEHVHVYAGLPWWGTICVTTVLVRALLFPL 128 Query: 379 AKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKAMIQLYKTHNINPLAG--CWPILL 435 K + A ++P++++L RE + Q+A ++ K N + +L Sbjct: 129 YVKYSDTIAKTSRVKPELEQLTREVMASTDLVEQQQATLKRRKLLQENGIKNRYLVVPIL 188 Query: 436 QIP----VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 Q+P F AI ++ + ++ W DLA ADP F Sbjct: 189 QLPLAISFFAAIRQMANYPVDGFSVQGIWWFADLAQADPYLGLQCLTAAMFMGLSRAGGE 248 Query: 492 IWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 F + ++P++ + A + +G+++Y + + V S+ Sbjct: 249 -----SGAQQF----------SPQMRKVFTFLPLLTIPATMNLASGVVLYLAVNGVCSVA 293 Query: 552 QQAV-----IMKM 559 Q + I + Sbjct: 294 QTLLLRTPAIRRK 306 >gi|319653028|ref|ZP_08007133.1| hypothetical protein HMPREF1013_03748 [Bacillus sp. 2_A_57_CT2] gi|317395377|gb|EFV76110.1| hypothetical protein HMPREF1013_03748 [Bacillus sp. 2_A_57_CT2] Length = 177 Score = 80.0 bits (195), Expect = 9e-13, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 73/190 (38%), Gaps = 30/190 (15%) Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVIS 448 ++ +L+ K Q LQ+ M LY++H +NPL GC PI +Q+P+ + I Sbjct: 11 ELEKIQQKLKTAKKPQEQQKLQQEMFGLYQSHGVNPLNAAGCLPIFIQMPILMGFFYAIR 70 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM- 507 + E+ A + W F L + II + ++Q + Sbjct: 71 GNQEIA-AHSFLW------------FNLGHSDIW----------ITIIAGIVYYLQYRFT 107 Query: 508 --SPPPADKGQAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH-GAE 563 + Q I PV+ + + PA L +YW+ + + Q + +++ + Sbjct: 108 LTNMTAQTPKQMKLIGLLSPVMIMLVSLNAPAALPLYWTAGGIFLVFQSWLGRRLYTKDK 167 Query: 564 IGLIDRLRST 573 + + + Sbjct: 168 PDAVQIMSES 177 >gi|227889543|ref|ZP_04007348.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus johnsonii ATCC 33200] gi|227850021|gb|EEJ60107.1| Oxa1 family cytochrome oxidase biogenesis protein [Lactobacillus johnsonii ATCC 33200] Length = 327 Score = 80.0 bits (195), Expect = 9e-13, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 94/258 (36%), Gaps = 32/258 (12%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + F + + + + + G AI++ T V+L+ PL + Sbjct: 40 YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFAVQLIVMPLRLASQRKMTTQQE 99 Query: 392 IQPKIDELREKFKQ---------SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 K+ + ++ + + +++YK +N++ + GC P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S E+ + F+G + + I ++ + Sbjct: 160 MGIYQAVAYSKELAASSFFG-------------------ISLGQRSIILTIIATLLYVVQ 200 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ M P K M L P + F S P L +Y+ +I+I+QQ + Sbjct: 201 GYLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLITT--F 258 Query: 561 GAEIGLIDRLRSTFSKNY 578 + + + ++ Sbjct: 259 VIMPKVKRDVAAELNERP 276 >gi|182438478|ref|YP_001826197.1| hypothetical protein SGR_4685 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466994|dbj|BAG21514.1| putative membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 256 Score = 80.0 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 22/229 (9%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 M F + + L+ F+ + AI+L T V+L PL++ Sbjct: 1 MSAFMSAFASLVGSLADLLQPFFQ-TASTAAAIVLFTALVRLAVHPLSRAAARGQKARSR 59 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP+I ELR+K ++P ++ QKA+++L+ ++PL+GC P LLQ+P FF +Y + S Sbjct: 60 LQPQIAELRKKHGKNPEKM-QKAIMELHAAEKVSPLSGCLPSLLQMPAFFLLYH-LFSSG 117 Query: 452 EMRHAPFWGWIKD-LAAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMK--- 506 + P D L A G F G++++G++ I+ +++ F + Sbjct: 118 SIGGEPNALLSHDLLGAPLGGRWHDALGNGGMFGAQGWVYLGLFAIVTAVATFNYGRTKR 177 Query: 507 ------MSPPPADKGQA-----MILNWMPVVFVFALSS---FPAGLIIY 541 M+P GQA + MP++ F L + P +Y Sbjct: 178 QLAANPMTPAAGPDGQAVPGMGAMAKVMPLMSFFTLITVAVVPLAAALY 226 >gi|511461|gb|AAA56921.1| unknown [Coxiella burnetii] Length = 131 Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 27/42 (64%) Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ +PV+F +FPAGL++YW +NV+ +QQ + K + Sbjct: 1 MMWILPVIFTVFFINFPAGLVLYWITNNVVQTLQQWYVNKTY 42 >gi|224477076|ref|YP_002634682.1| hypothetical protein Sca_1592 [Staphylococcus carnosus subsp. carnosus TM300] gi|229462937|sp|Q9RGS4|OXAA_STACT RecName: Full=Membrane protein oxaA; Flags: Precursor gi|222421683|emb|CAL28497.1| conserved hypothetical protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 289 Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 104/258 (40%), Gaps = 41/258 (15%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ---- 393 + F+ ++ + ++G+AI++ + ++++ P Y ++ M+ Sbjct: 33 YNTFVKNMDNIIHWLGASFNNDYGLAIIVLVLAIRIIVLPFMLSNYKNSHMMREKMIIAK 92 Query: 394 PKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKV 446 P +D ++EK +++ Q + M+++YK +++NP+ GC P+L+Q+P+ ++ V Sbjct: 93 PDMDAVKEKVQRARTQEDKMAANQEMMEVYKKYDMNPMQSMLGCLPMLIQMPIIMGLFFV 152 Query: 447 I--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + + W +LA D +I + F+Q Sbjct: 153 LKYPSPGGITEHSHFLWF-NLAKPDIW---------------------ITVIAGVLYFLQ 190 Query: 505 MKMSPPPADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S Q + P++ ++ S A L +YWS S IVQ + + Sbjct: 191 AYVSTFSMPPEQKQMSYMMMIISPIMIIWVSLSSAAALGLYWSVSAAFLIVQTYIANAYY 250 Query: 561 --GAEIGLIDRLRSTFSK 576 A+ + + + + Sbjct: 251 SKKAKEEVAPMIAAYEKE 268 >gi|328787232|ref|XP_391901.3| PREDICTED: mitochondrial inner membrane protein OXA1L-like [Apis mellifera] Length = 426 Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 97/269 (36%), Gaps = 35/269 (13%) Query: 322 EKDLAIPRFEMLIDWGWFYF-IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK 380 P FE L G+ F +++ + + +L + I+LT+ +KLL FP + Sbjct: 116 LHANGEPTFESLGLGGYGPFGLSQYFYEWLHISCDL--PWWATIILTSTLIKLLTFPCSI 173 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG---CWPILLQI 437 + A + NI P++ +++E ++ L +PI I Sbjct: 174 SIQKNNAKLNNILPQMVKIQENMTEARKCGNSMEAAHFAAELETLFLKNNIKIFPIGAHI 233 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 P+F A+ ++ S +E W DL D + P+ Sbjct: 234 PIFIALREMTSKPVESLKEGGLWWFTDLTLPDQYY-------------------LLPLCT 274 Query: 498 SLSMF-IQMK--MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ-Q 553 +++M+ I + + + +PV+ FP ++ +W+ SN I++++ Q Sbjct: 275 TVTMYVISTRALKNSGNVSPIMRHLFKAIPVISFLFAMRFPGAILCHWTISNFITLIENQ 334 Query: 554 AVIMKM------HGAEIGLIDRLRSTFSK 576 + K I +R K Sbjct: 335 LLSTKKVRMFCNIPPLIKHKANVREGQKK 363 >gi|300361213|ref|ZP_07057390.1| membrane protein OxaA 2 [Lactobacillus gasseri JV-V03] gi|300353832|gb|EFJ69703.1| membrane protein OxaA 2 [Lactobacillus gasseri JV-V03] Length = 327 Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 94/257 (36%), Gaps = 36/257 (14%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + F + + + + + G AI++ T V+L+ PL + Sbjct: 40 YAWVFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 392 IQPKIDELREKFKQ---------SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 K+ + ++ + + +++YK +N++ + GC P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKDNNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S E+ + F+G + + I ++ + Sbjct: 160 IGIYQAVAYSKELAASSFFG-------------------ISLGQRSIVLTIIATLLYVIQ 200 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ----AVI 556 ++ M P K M L P + F S P L +Y+ +I+I+QQ +I Sbjct: 201 GYLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQVITTFII 260 Query: 557 MKMHGAEIGLIDRLRST 573 M + + L Sbjct: 261 MPK--VKKDVAAELNER 275 >gi|224477730|ref|YP_002635336.1| putative lipoprotein [Staphylococcus carnosus subsp. carnosus TM300] gi|222422337|emb|CAL29151.1| putative lipoprotein precursor [Staphylococcus carnosus subsp. carnosus TM300] Length = 287 Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 106/241 (43%), Gaps = 40/241 (16%) Query: 338 WFYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ--- 393 ++ AKPM L+ + NL ++G+AI++ + ++L+ P Q + M+ + Sbjct: 31 FYNTFAKPMDHLLHWLGNNLGHDYGLAIIIIVLAIRLVMLPFMLSQTKNGQMMRKVMDFA 90 Query: 394 -PKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYK 445 P+++ ++EK K++ Q + M+++YK + +NP+ GC PIL+Q+P+ F +Y Sbjct: 91 KPEMNAVQEKVKRARTQEEKMAANQEMMEVYKKYELNPMKSMLGCLPILIQMPILFGLYV 150 Query: 446 VI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + + P + W DL D + II + F+ Sbjct: 151 SLKWPSHGGITAHPNFLWF-DLTKPD---------------------ILITIIAGVLYFL 188 Query: 504 QMKMSPPPADKGQAMILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q +S K Q + M + ++ + + L +YWS S + IVQ V + Sbjct: 189 QSLVSLENMPKEQRQMGYMMMIISPIFIIYISYTSASALGLYWSVSAIFMIVQTFVANRY 248 Query: 560 H 560 + Sbjct: 249 Y 249 >gi|154496118|ref|ZP_02034814.1| hypothetical protein BACCAP_00402 [Bacteroides capillosus ATCC 29799] gi|150274673|gb|EDN01737.1| hypothetical protein BACCAP_00402 [Bacteroides capillosus ATCC 29799] Length = 474 Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 115/302 (38%), Gaps = 75/302 (24%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + P ++ FY L N+GIA++L V VK++ FPL+ K S M + + Sbjct: 1 MQGIQLLLTPFVWVLMLFYELFDNYGIALILFAVLVKVILFPLSIKAKRSMIQMNMLNGQ 60 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS--ISLEM 453 + +L+ K + + +LY+ +NP+ GC +L + + +Y +I ++ M Sbjct: 61 MQKLQ-KMYGNNRDKYNLEVQKLYEKEKVNPMGGCLWSMLPLVILLPLYAIIRQPLTYLM 119 Query: 454 RHAPFW-----------------GWIKDLAAADPTNI----------------------- 473 P GWIK+ AAD N+ Sbjct: 120 NLTPDVISEVARVVDWNNAAVSAGWIKE--AADFANVGYNQLYLASLITPENIGAVQAVA 177 Query: 474 -------FTLFGILPFYLPGF------------MHVGIWPIIMSLS----MFIQMKMS-- 508 F G+ +P + + + + PI+ + S I MK + Sbjct: 178 EGARVINFNFLGLNLAQMPQWQFWTWSSVDWAHIGLFLMPIVSAGSGLLFSLIMMKTNAV 237 Query: 509 -----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 A+ +L P++ ++ + PAGL +YW NV+S++Q+ + K+ + Sbjct: 238 NQQSRNAAANSTNKTMLIISPLMSLWIGFAMPAGLSVYWISQNVLSMLQEFLAGKLLKKD 297 Query: 564 IG 565 Sbjct: 298 YE 299 >gi|319936675|ref|ZP_08011088.1| membrane protein [Coprobacillus sp. 29_1] gi|319808232|gb|EFW04797.1| membrane protein [Coprobacillus sp. 29_1] Length = 286 Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 103/244 (42%), Gaps = 30/244 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + + P+ + + +++GN ++ T+F+ +L P+ K VST M+ +QP+++ Sbjct: 55 FDFILTIPIAKGILFITDILGNVAWGVVGMTIFINILILPIMIKSTVSTQKMQMLQPELE 114 Query: 398 ELREKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +++ K+ Q Q M LYK H+++ + L +P+ A+++ + + Sbjct: 115 KIQRKYAGRKDQASQMRQSAEMQALYKKHDVSMFSSF-TTFLTLPIMLAMWQSVQRIEIL 173 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI-IMSLSMF-------IQM 505 A F+G L + V I + I+ ++ + I + Sbjct: 174 YQATFFG-------------LNLGATPMSQITSGNWVYIIIVAIVGITQYLAIEINNIML 220 Query: 506 KMSPPPADKGQAMILNWMPV----VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 K +P Q + M + + V+ S P + +YW +++++I++ I H Sbjct: 221 KRNPRYKVSKQQKSMKTMNIVMTAMIVWFALSMPTAMSLYWITTSLVTIIRTVYIQIYHV 280 Query: 562 AEIG 565 + Sbjct: 281 EKKK 284 >gi|253581091|ref|ZP_04858351.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847627|gb|EES75597.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 429 Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 84/281 (29%), Gaps = 28/281 (9%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 N A K + + + + I ++ ++ VG+ I Sbjct: 85 NNDTAAMQKMQEETQAVYQKYGVSPTGSCVQLAIQFPILMALYQVIYKIPAYVGSVR-DI 143 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNI 424 + + V + K + ++ K + + + Sbjct: 144 LASAVTSITGVNGYTDILQQFITDNKMTRVQLIMDGSKATSNSVTDFL---------YAL 194 Query: 425 NPLAGCWPILLQIPVFFAIYKVISISL-EMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +P W L + F ++ + E+ H + + G Sbjct: 195 SPSQ--WKTLAETSQFAGFTDTLNSTAKEISHVQNFFGLNIADQPLTYIKAAFVGGSALL 252 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DKGQAMIL-------NWMPVVFVFALS 532 + + PI+ + I +K+ P A D Q ++ MP++ Sbjct: 253 AIVAILI---PILAWATQMINLKLMPQAAQQSGDSQQDAMMNSMKTMNMVMPLMSAVFCF 309 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +FP GL IYW S + VQQ VI K +I + D + Sbjct: 310 TFPVGLGIYWVASAAVRSVQQVVINKKMD-KIQIEDLISEN 349 Score = 50.8 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 59/118 (50%), Gaps = 7/118 (5%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 +I ++ L++ F + N GI I++ ++ + L PL KQ + +QP+ Sbjct: 16 ATVMGWIMDGIYRLLNIFG--IQNIGICIVIFSILIYALMTPLQIKQQKFSKLSAIMQPE 73 Query: 396 IDELREKFKQSP-----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 + ++++K+K Q +Q+ +Y+ + ++P C + +Q P+ A+Y+VI Sbjct: 74 LQKIQKKYKGKNNDTAAMQKMQEETQAVYQKYGVSPTGSCVQLAIQFPILMALYQVIY 131 >gi|325001534|ref|ZP_08122646.1| putative inner membrane protein translocase component YidC [Pseudonocardia sp. P1] Length = 302 Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 95/264 (35%), Gaps = 45/264 (17%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F+ P+ +M ++ L G + ++++ + V+ L A + S Sbjct: 1 MLDFLYYPVSFVMRLWHELFGALLGPASGLAWALSVVFLVLTVRALLVRPAWSRMRSARI 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 + + P++ LREK + + L +A L++ H +P+AG LLQIPVF A+ V+ Sbjct: 61 TRALGPQLTALREKHR-HDSRRLAEATAALHREHGSSPVAGLGTALLQIPVFVALLHVLR 119 Query: 449 I------SLE----------------------MRHAPFWGWIKDLAAADPTNIFTLFGIL 480 S E + AP W+ A + Sbjct: 120 SFNRPGLSFEQNAAIANYAFGPDQVASFLQARLFGAPLSAWLTMPADQLASFGGAPVAAG 179 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVV------FVFALSSF 534 + + LSM ++ P G +L MP V Sbjct: 180 AVAAVVVPLAVLAAVCTHLSMRF-ARVDPSGQPAGVGRVLAAMPWVAPLGVLVGGLFFPV 238 Query: 535 PAGLIIYWSWSNVISIVQQAVIMK 558 P L++YW ++ ++VQQ VI + Sbjct: 239 PIALLLYWMTGSLATLVQQLVITR 262 >gi|291547601|emb|CBL20709.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Ruminococcus sp. SR1/5] Length = 440 Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 14/120 (11%) Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-------------ADKGQ 516 P F L + + P++ + + +K+ P Sbjct: 242 PLYYIMEFFKNHGSLLLAIVALLIPVLAWATQMLNLKLMPQAATQPADGNDQASAMANSM 301 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + MP++ F +FP GL IYW S V+ QQ I + H ++ + D + K Sbjct: 302 KTMNMVMPLMSAFFCFTFPVGLGIYWIASAVVRSAQQFAINR-HLDKMNIDDLVNENMKK 360 Score = 52.7 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 58/120 (48%), Gaps = 5/120 (4%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +I ++ ++ + + N G+ I++ ++ + PL KQ + +Q Sbjct: 18 QIASVMGWIMDGIYKMLDGLFG-IQNIGLCIIIFSILIFAFMTPLQIKQQKFSKLSAIMQ 76 Query: 394 PKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P+I ++++K++ Q + + +Y+ + ++P C + +Q+P+ FA+Y+VI Sbjct: 77 PEIQKIQKKYQGKKDQASMMKMNEETQAVYQKYGVSPTGSCVQLAIQMPILFALYQVIYR 136 >gi|296425195|ref|XP_002842128.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638387|emb|CAZ86319.1| unnamed protein product [Tuber melanosporum] Length = 479 Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 89/243 (36%), Gaps = 39/243 (16%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTA 387 F + Y + L+ + + G I+L+ ++LL FP K + A Sbjct: 130 GFLKEFGLDYGYGFTTLVQSLIEHVHVYAGTPWFATIILSVGVLRLLQFPFYLKMSDTAA 189 Query: 388 NMKNIQPKIDELREKFKQSP-------PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 MK + P L +K + + + + QLY + +PI Q+PVF Sbjct: 190 KMKELNPFAVPLTKKMRDAQIAGDTPGMVAARTELGQLYSRSGVKRRWLFFPI-SQVPVF 248 Query: 441 FAIYKVISIS-----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 + YK + E+ W DL+ ADP + P+ Sbjct: 249 YGFYKNLRGMSDIPIPEL-TEGGLSWFTDLSVADPFY-------------------LLPM 288 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILN-----WMPVVFVFALSSFPAGLIIYWSWSNVISI 550 S S+F Q+ + Q + ++P+V S +PA L Y+ +++ S+ Sbjct: 289 ATSASLFAQLSLGGEAGTNLQTEQMKKVLLIFLPLVTFVFTSQWPAVLTFYFLCNSLFSL 348 Query: 551 VQQ 553 VQ Sbjct: 349 VQT 351 >gi|326779124|ref|ZP_08238389.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf. griseus XylebKG-1] gi|326659457|gb|EGE44303.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces cf. griseus XylebKG-1] Length = 256 Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 22/229 (9%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 M F + + L+ F+ + AI+L T V+L PL++ Sbjct: 1 MSAFMSAFASLVGSLADLLQPFFQ-TASTAAAIVLFTALVRLAVHPLSRAAARGQKARSR 59 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 +QP+I ELR+K P+ +QKA+++L+ ++PL+GC P LLQ+P FF +Y + S Sbjct: 60 LQPQIAELRKKH-GKNPERMQKAIMELHAAEKVSPLSGCLPSLLQMPAFFLLYH-LFSSG 117 Query: 452 EMRHAPFWGWIKD-LAAADPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMK--- 506 + P D L A G F G++++G++ I+ +++ F + Sbjct: 118 SIGGEPNALLSHDLLGAPLGGRWHDALGNGGMFGAQGWVYLGLFAIVTAVATFNYGRTKR 177 Query: 507 ------MSPPPADKGQA-----MILNWMPVVFVFALSS---FPAGLIIY 541 M+P GQA + MP++ F L + P +Y Sbjct: 178 QLAANPMTPAAGPDGQAVPGMGAMAKVMPLMSFFTLITVAVVPLAAALY 226 >gi|260584053|ref|ZP_05851801.1| membrane protein OxaA 2 [Granulicatella elegans ATCC 700633] gi|260158679|gb|EEW93747.1| membrane protein OxaA 2 [Granulicatella elegans ATCC 700633] Length = 314 Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 97/251 (38%), Gaps = 35/251 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + Y +L + GN+ I+IM+ ++ V+++ P KQ + + + Sbjct: 38 YDYLAVPTQTILNWIASAIGGNYVISIMIVSIVVRIILMPTMFKQMKTMLMNQEKMALLK 97 Query: 398 ELREKFKQS--------PPQVLQKAMIQLYKTHNIN----PLAGCWPILLQIPVFFAIYK 445 +K + +Q+ + +Y+ +N++ +GC P+L+ +PV+ A+Y Sbjct: 98 PYIDKMNERYGDNPTPEQRMEVQQYTMDIYRLNNVSLTGGVASGCLPVLVTMPVYSALYN 157 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 I S E+ ++ F G + YLP + + +I +I Sbjct: 158 AILYSPEISNSSFMG----------------VSLGSTYLPIAIATAVIYLIQG---YISQ 198 Query: 506 KMSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + K QA + MPV+ + AG+ IY+ S + +I+Q + Sbjct: 199 -LYMDETQKAQAKATLFLMPVMMLMFTVGTAAGIGIYFFTSGLTAILQTWIQN--QFIRP 255 Query: 565 GLIDRLRSTFS 575 + + + Sbjct: 256 KVKAEIDAELE 266 >gi|229829514|ref|ZP_04455583.1| hypothetical protein GCWU000342_01606 [Shuttleworthia satelles DSM 14600] gi|229791945|gb|EEP28059.1| hypothetical protein GCWU000342_01606 [Shuttleworthia satelles DSM 14600] Length = 428 Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DKG--QAMIL-NWMPV 525 I F + + PI F+ MK+ P A D+ Q ++ MP+ Sbjct: 243 IKQGFFADQKDWGLVIVALLIPIASYFFQFLSMKLMPTAAGAGSDQMEQQMKMMNTMMPL 302 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 V + + P G ++YW +V+ ++QQ + K H ++ L + Sbjct: 303 VSLVFGFTLPVGFVLYWIIGSVVRVIQQYFLNK-HFEKMDLQQII 346 Score = 52.7 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 49/97 (50%), Gaps = 4/97 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV----LQ 412 + + + I++ T+ + + PL +Q + + I P+ +++K+K Q Q Sbjct: 38 IKDIWVTIVVFTIIIYMALLPLTVRQQKFSILQQKIAPETKAIQKKYKGKRDQASMMAQQ 97 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + LY + I+P+ C +++Q+P+ F +Y+VI Sbjct: 98 EEQQALYDKYGISPMGSCLQMIIQLPILFGLYRVIYN 134 >gi|317148369|ref|XP_001822724.2| hypothetical protein AOR_1_948134 [Aspergillus oryzae RIB40] Length = 497 Score = 79.6 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 111/311 (35%), Gaps = 40/311 (12%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 ++ + + ++ S H A+F++ + T A ++ + ++ Sbjct: 49 NQSLAGNLSWRPASSIHHASAARFNSTASAASASTATAATAVETAAPEQASDLSDFDITA 108 Query: 326 AIPRFEMLIDW--GWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQ 382 + L D + + + + + +F+ G A I+ T + V+L Sbjct: 109 IPEKIGYLKDLGLDYGWGPSSMIEYFIEHFHIWAGLPWWASIVGTGLLVRLALLKPMLSA 168 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILL 435 + + N++ + LR K Q+ + M+Q L+ H I + Sbjct: 169 ADVSTKIHNLKDVVAPLRAKMAQAANEKRHADMMQTRAELQQLHSDHGIK-FYKTMIPFI 227 Query: 436 QIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 Q+P+ F Y+V+ + A GWIKDL ADP Sbjct: 228 QLPLGFGCYRVVKGMTSLPVPGLAAESVGWIKDLTVADPYF------------------- 268 Query: 492 IWPIIMSLSMFIQMK------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + P + +M++ K M+ +L MP +S FP+ L +Y+ + Sbjct: 269 LLPAATAFAMYMSFKKGGENGMNQMANSPVGRAVLYGMPAFSFAFMSFFPSALQLYFLST 328 Query: 546 NVISIVQQAVI 556 + ++ Q ++ Sbjct: 329 GLFALGQAYML 339 >gi|153815419|ref|ZP_01968087.1| hypothetical protein RUMTOR_01654 [Ruminococcus torques ATCC 27756] gi|145847278|gb|EDK24196.1| hypothetical protein RUMTOR_01654 [Ruminococcus torques ATCC 27756] Length = 441 Score = 79.3 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 107/316 (33%), Gaps = 31/316 (9%) Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 F L Q KF+ + P I +A K+ ++ ++++ + Sbjct: 50 FTIIVYTLLLPLTIKQQKFTKMSAVMQP--EIQKIQKRYANKKDQASMLKQQEEMNMVYD 107 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + + + + Y +V N I V+ ++ PL +K +T K Sbjct: 108 KYGLKMSSGCLPSLLQLVFLFGLYPVVQN----IPEYVTKVRNVYIPLVEKIQATTGYEK 163 Query: 391 NIQPKIDEL--REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 + L + ++ +++ N L + ++P F ++ Sbjct: 164 IMSSLATGLVPGAESLDYTKAGNMIEVMYKFQSSTWNEL------VDKMPKFESVVNNTM 217 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 E+ H + + A + + G + + P++ L+ FI +K+S Sbjct: 218 S--EVSHLNNFLGVDIGAHP---WNLLTDALAAASIAGVIIAVLIPVLAGLTQFISVKLS 272 Query: 509 PP-----------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P + MP++ V + PAGL +YW S + VQQ + Sbjct: 273 QAGAGGAAMSDDNPMAASMKTMTYTMPLISVVFGFTLPAGLGLYWVASAAVRSVQQLAVN 332 Query: 558 KMHGAEIGLIDRLRST 573 K + + D ++ Sbjct: 333 KYLSKK-SIDDIIKEN 347 Score = 48.1 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 5/128 (3%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 ++ I + + + M + + + + N G+AI++ T+ V L PL KQ T Sbjct: 12 YDWPIIKQVSWLLGQVMNGIYNALSAIGIENIGVAIIVFTIIVYTLLLPLTIKQQKFTKM 71 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +QP+I ++++++ Q Q+ M +Y + + +GC P LLQ+ F +Y Sbjct: 72 SAVMQPEIQKIQKRYANKKDQASMLKQQEEMNMVYDKYGLKMSSGCLPSLLQLVFLFGLY 131 Query: 445 KVISISLE 452 V+ E Sbjct: 132 PVVQNIPE 139 >gi|227487666|ref|ZP_03917982.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51867] gi|227541375|ref|ZP_03971424.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51866] gi|227092360|gb|EEI27672.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51867] gi|227182926|gb|EEI63898.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51866] Length = 321 Score = 79.3 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 104/264 (39%), Gaps = 53/264 (20%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + + ++I++ T V+ L S M+ +QPK+ ++EK+K +P + Sbjct: 22 LIMNPDWGVTWALSIVMLTFTVRALLLKPTMNSMRSMRKMQILQPKMQAIQEKYKNNPEK 81 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS--------------LEMRH 455 + + ++ K +P+ GC P+L+Q+PVF ++ V+ E + Sbjct: 82 M-MEETRRVQKEVGASPVKGCLPMLVQMPVFIGLFHVLRSFNRTGTGRGQLGLSIEENYN 140 Query: 456 APFWGWIKD--------------LAAA--DPTNIFTLFGILPFYLPGFMHVGI-WPIIMS 498 P + + D L+A P +++ FG F + V + ++++ Sbjct: 141 TPNYIFGVDDVRSFLEARLFGVPLSAYISMPEDMYHAFGEGDFTRTNVIMVAAPFILLIA 200 Query: 499 LSMFIQMKMS------------PPPADKGQAM---------ILNWMPVVFVFALSSFPAG 537 ++ + + S + QA +L +MP+ +F + G Sbjct: 201 VATHLNGRFSVKRQKQRLASGKQKAPENDQAQMSMNMMNNMMLYFMPLTILFTGFVWHIG 260 Query: 538 LIIYWSWSNVISIVQQAVIMKMHG 561 L+ Y + +N+ + QQ + Sbjct: 261 LLCYMAGNNIWTFCQQRYVFSKMD 284 >gi|241890041|ref|ZP_04777339.1| stage III sporulation protein J [Gemella haemolysans ATCC 10379] gi|241863663|gb|EER68047.1| stage III sporulation protein J [Gemella haemolysans ATCC 10379] Length = 297 Score = 79.3 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 89/250 (35%), Gaps = 46/250 (18%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----- 391 ++ KPM + +S + G++G +I++ T+ ++LL P Y + Sbjct: 30 TFYDIFVKPMDLSLSKIHEYTGSWGWSIVIITLVIRLLVLPFMLNNYKVQNKSRKGQELA 89 Query: 392 ------IQPKIDELREK-----------FKQSPPQVLQKAMIQLYKTHNINPLA--GCWP 432 +Q K +EK +S LQ+ + + K ++ PL+ GC P Sbjct: 90 RPELEVLQKKQQAAKEKEARAISNEEKMQARSELMELQREQMAILKKYDAMPLSLGGCLP 149 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+ +P ++ +S + A D T + G+ + I Sbjct: 150 MLIPLPFLTGLFYTLSNP--LYSAGII---------DSTFL----GVFNLGTRSYTLPII 194 Query: 493 WPIIMSLSMFIQMKMSPPPADK-------GQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++ ++ IQM + P P M+ P++ + +Y+ Sbjct: 195 AFVVYAIQTKIQMSLMPTPTQPGQEQMQSQMKMMQWLSPIMITGFSFWVAGAVAVYYIVG 254 Query: 546 NVISIVQQAV 555 + I Q + Sbjct: 255 GLFMIFQTYL 264 >gi|85104274|ref|XP_961714.1| hypothetical protein NCU01102 [Neurospora crassa OR74A] gi|28923262|gb|EAA32478.1| predicted protein [Neurospora crassa OR74A] Length = 462 Score = 79.3 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 87/298 (29%), Gaps = 42/298 (14%) Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 Q +Y S G A +A P S + + + + F Sbjct: 66 QVRYASTGPDAAVAADAATAAAAAPSSSPVDAVAATPVELTGSDLLNLPEQIG---FLKT 122 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL-----LFFPLAKKQYVSTAN 388 + + + + M L + Y G A + + +++ Sbjct: 123 LGLDYGWGVTSMMQWLTEHVYVYSGLPWWATLAAVAAIVRVAIFKPSLGASQESQKMQDL 182 Query: 389 MKNIQPKIDELREKFKQSPPQV------LQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 KN + + K ++ M + K IN + +Q+P+ F Sbjct: 183 NKNPKYAAIMAKVKEASFDTTKQNDLVKYRQEMALMTKNAGINYFK-VFIPFIQVPIGFG 241 Query: 443 IYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 ++++I +E W DL ADP PI + Sbjct: 242 MFRLIRGMAALPVESLETGGTLWFPDLTVADPYF-------------------ALPIASA 282 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFV----FALSSFPAGLIIYWSWSNVISIVQ 552 M+ P QA ++ M +V V FA + PA L Y+ S + Q Sbjct: 283 CLFVASMRKPIPYMAPQQARMMKSMGLVLVPVSIFATAWLPAALQWYFLVSAIGQYFQ 340 >gi|320589579|gb|EFX02035.1| mitochondrial export translocase [Grosmannia clavigera kw1407] Length = 532 Score = 79.3 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 30/243 (12%), Positives = 74/243 (30%), Gaps = 39/243 (16%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + + + + L+ + + G A I LT + + F + +A + Sbjct: 167 AMGLDFGWGPSSMCMWLLEHVHVYTGLPWWASIGLTVLLFRSAIFFPSLTAAEQSARFQK 226 Query: 392 IQPKIDELREKFK--------QSPPQVLQKAMIQLYKTHNIN---PLAGCWPILLQIPVF 440 ++ + Q + K + ++ +P Sbjct: 227 LRADPKYAAAMTEMQQSAMRGGQLAQGRAMELRMTTKRMQAAAGVSTWKMFIPMINVPFG 286 Query: 441 FAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 + +++++ + W +DL DP + PI Sbjct: 287 YGMFRLLRSMALLPVPALETDGLLWFQDLTVPDPFF-------------------VLPIA 327 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS----SFPAGLIIYWSWSNVISIVQ 552 + M++ + + QA ++ M +V AGL +++ S+V+ +VQ Sbjct: 328 SATIMYLIFRNNIKYMAPEQAQLMKMMQIVITPVSILVTVKMSAGLTLFFFLSSVLQMVQ 387 Query: 553 QAV 555 + Sbjct: 388 TWL 390 >gi|150864659|ref|XP_001383584.2| hypothetical protein PICST_57776 [Scheffersomyces stipitis CBS 6054] gi|149385915|gb|ABN65555.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 335 Score = 79.3 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 93/239 (38%), Gaps = 23/239 (9%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 I ++ + ++ + G I++ T+ V++ FP K + A Sbjct: 48 SIGMAQGWYPTDIVERMLELTHVYTGLPWWGTIVVVTIAVRVALFPFYMKASANVARTAK 107 Query: 392 IQPKIDE----LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL---LQIPVFFAIY 444 ++P++D+ LR V +A ++ K +NI+ A PIL L F A+ Sbjct: 108 VKPQLDQALADLRAAETPQEQYVAMQARKKVMKDNNISMTAQMAPILQLPLAYGFFQALR 167 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 K+ + +E W +DLA+ DP + + Q Sbjct: 168 KMANYPVEGFSTGGIYWFEDLASVDPYLGLQGIAAAVIIAVVRLG--------GETGSHQ 219 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 M I +P++ +F +F A +++Y++ ++V+S++Q +V+ + Sbjct: 220 MAKPM-------KNIFTVVPLISIFITKNFSAAVVLYFAVNSVVSLIQSSVLRNKSFRK 271 >gi|259046600|ref|ZP_05737001.1| membrane protein OxaA2 [Granulicatella adiacens ATCC 49175] gi|259036765|gb|EEW38020.1| membrane protein OxaA2 [Granulicatella adiacens ATCC 49175] Length = 315 Score = 79.3 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 97/257 (37%), Gaps = 41/257 (15%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + W + Y + ++L GN+ IAI++ +V V+++ P Q S + Sbjct: 40 VGWLYEYLVVPTQWLLNQIASMFNGNYAIAIVIVSVLVRVVLMPTQFHQMKSMLVQQEKM 99 Query: 394 PKIDELREKFKQSPPQV--------LQKAMIQLYKTHNINPL----AGCWPILLQIPVFF 441 + + Q +Q+ + LYK +N++ + +GC P+L+ +P++ Sbjct: 100 AVLKPYIAEITARAEQAATPQEKLEIQQEQMDLYKLNNVSLMGGLGSGCLPLLITLPIWS 159 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y I +S E+ +++D I +P I + Sbjct: 160 GLYNAILLSNEI------------SSSDFMGIALGKEFVP-----------LAIATAALY 196 Query: 502 FIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +IQ +S D+ + +PV+ PAG+ IY+ S +I I+Q + Sbjct: 197 YIQSLVSQMGMDEETKKQSRSMNYILPVMMFMMTFQSPAGVGIYFFASALIQILQSWIQN 256 Query: 558 KMHGAEIGLIDRLRSTF 574 + ++ Sbjct: 257 --TYLRPKIKAQIDEEL 271 >gi|300933178|ref|ZP_07148434.1| putative preprotein translocase subunit [Corynebacterium resistens DSM 45100] Length = 327 Score = 79.3 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 100/261 (38%), Gaps = 42/261 (16%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI--- 416 + I+I++ V ++ L FPLA +QY S ++ N++P + L ++K +K + Sbjct: 31 WVISIVMLVVTIRGLLFPLAYRQYASGRHLVNLRPSLRRLNAEYKGKKDAEARKEKLARE 90 Query: 417 -QLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEMRHAPFWGWIKDLAAAD--- 469 +L K + + GC P L+Q+P+ A+Y+++ +E AP G L + D Sbjct: 91 RELRKNSDYKMVDGCIPALIQVPLIIALYQLLLRIARPVEGIDAPHHG-FGSLTSEDVSH 149 Query: 470 ------------PTNIFTLFGILPFYLP-GFMHVGIWPIIMSLSMF------IQMKMSPP 510 +I + + P+ ++F MK + Sbjct: 150 FLDARLFDVPISSYHIMNANTLAELGTTRSSVFWLALPLATCAAVFTTANWAYTMKRNLQ 209 Query: 511 PADKGQ------AMILNWM-PVVFVF-----ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D ++ P +F+F L P +++YW SN+ + +Q +I + Sbjct: 210 TVDHESFAARGFMKLMWVFGPFLFLFPLVFGLLGPAPIAILMYWVCSNLWTAMQTFIIQR 269 Query: 559 MHGAEIGLIDRLRSTFSKNYN 579 + R ++ Sbjct: 270 TLDKRVPYTTEFREYHAEQKQ 290 >gi|322385984|ref|ZP_08059624.1| SpoIIIJ family protein [Streptococcus cristatus ATCC 51100] gi|321269967|gb|EFX52887.1| SpoIIIJ family protein [Streptococcus cristatus ATCC 51100] Length = 337 Score = 78.9 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 96/259 (37%), Gaps = 40/259 (15%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF----PLAKKQYVSTANMKNI 392 W + + N +G+AI++ T+ V+L+ F + K + + M Sbjct: 67 IWDVLGQPMADSIQFFAKNSGLGYGLAIIIVTLIVRLIIFPLGIYQSWKATLQSEKMNYF 126 Query: 393 QPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKV 446 +P ++E+ + Q Q+ ++ + + ++ GC P+L+Q+P F A++ Sbjct: 127 KPIFAPIQERINNAETQEEKLEAQQELMAAQRENGLSMFGGIGCLPLLIQMPFFSALFFA 186 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 + + F + P +I+ + +IQ Sbjct: 187 AQYT-------------------NGVASSTFLGINLGKPSL----ALTLIVGVLYYIQSV 223 Query: 507 MSPPP-ADKGQAMILN---WM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +S D+ Q + +M P++ V PA + +YW I I+QQ +I + Sbjct: 224 LSLHGIEDETQKAQMKSATYMSPIMIVVFSFMSPAAVTLYWVVGGFIQIIQQFIIN--YL 281 Query: 562 AEIGLIDRLRSTFSKNYNS 580 + ++ + KN Sbjct: 282 IRPRIRKQVAEEYEKNPPK 300 >gi|255719834|ref|XP_002556197.1| KLTH0H07304p [Lachancea thermotolerans] gi|238942163|emb|CAR30335.1| KLTH0H07304p [Lachancea thermotolerans] Length = 383 Score = 78.9 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 96/269 (35%), Gaps = 24/269 (8%) Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAK 380 E I + +++ + +M + G I+ TTV V+LL FPL Sbjct: 76 EASNHIGYLSSIGLAKSWWWPPDLIQNIMEQIHVYTGLPWWGTIVTTTVIVRLLMFPLYV 135 Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-------AMIQLYKTHNINPLAGCWPI 433 K + A I+P++D + + + V + ++ N A + Sbjct: 136 KSSDTIARNSKIKPELDAINSELMGTTDMVEAQRVALRRKKLMAENGIKNRYLAAPMLQV 195 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 + + F I ++ + ++ W +DL+ ADP G+ F+ Sbjct: 196 PVALGFFSGIRQMANYPVDGFTNQGLAWFQDLSLADPY-----LGLQVITASVFISFTRL 250 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 F MP++ + A + +G+++Y++ + S++Q Sbjct: 251 GGETGAQQF----------SPAMKNFFTVMPLLSIPATMNLASGVVLYFAVNGACSVLQT 300 Query: 554 AVI-MKMHGAEIGLIDRLRSTFSKNYNSQ 581 V+ K ++ + D ++ S ++ Sbjct: 301 LVLRNKWIRKKLDIADVVKRPASTTGPAK 329 >gi|254567207|ref|XP_002490714.1| Mitochondrial inner membrane insertase [Pichia pastoris GS115] gi|238030510|emb|CAY68434.1| Mitochondrial inner membrane insertase [Pichia pastoris GS115] gi|328351099|emb|CCA37499.1| Mitochondrial inner membrane protein OXA1 [Pichia pastoris CBS 7435] Length = 376 Score = 78.9 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 90/249 (36%), Gaps = 22/249 (8%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 +++ + + Y + G I+ TT+ ++++ FPL K + A +P Sbjct: 83 AQSWWWPPDVLERTLEYVHVYSGLPWWGTIVATTIAIRVVMFPLFVKSSDTMARSAKAKP 142 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNIN---PLAGCWPILLQIPV----FFAIYKVI 447 ++DE + + + ++ + K LQ P+ F A+ + Sbjct: 143 EMDECMKVIRDAQTVGERQKAALMRKQITAKYGIKYRYMMAPFLQFPIAIGFFTALRHMA 202 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + ++ W DL+AADP L F + S F Sbjct: 203 LLPVDGFPTQGAYWFPDLSAADPYLGLQLISAATFMTSMKLGGE-----TGASNF----- 252 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 SP Q ++ +P + + + +G+++Y++ + S VQ A++ +I + Sbjct: 253 SPG----TQKLLTYVLPTLSIPFTMNLSSGVVLYFATNAACSFVQSALLRNKVFRKIAGL 308 Query: 568 DRLRSTFSK 576 + K Sbjct: 309 QEIVPRVKK 317 >gi|19114471|ref|NP_593559.1| mitochondrial inner membrane translocase Oxa101 [Schizosaccharomyces pombe 972h-] gi|13124375|sp|O14300|OXA11_SCHPO RecName: Full=Mitochondrial inner membrane protein oxa1-1; AltName: Full=Cytochrome oxidase biogenesis protein 1-1; Short=Sp1; Flags: Precursor gi|2370552|emb|CAB11488.1| mitochondrial inner membrane translocase Oxa101 [Schizosaccharomyces pombe] gi|2739283|emb|CAA63843.1| oxa1Sp1 [Schizosaccharomyces pombe] Length = 374 Score = 78.9 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 92/235 (39%), Gaps = 36/235 (15%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 ++ A + + ++I+LTT+ V+L P+ + ++ + IQP++ + Sbjct: 65 WWPYALIQNTAYTINVYAGAPWWVSIILTTLGVRLALTPVMIASFRNSTKLSVIQPEMKK 124 Query: 399 ----LREKFKQSPPQVLQKAMIQL---YKTHNINPLAGCWPILLQIPVFFAIYKVIS--- 448 ++ + L + I L Y HN+NP A L Q VFF+ + I Sbjct: 125 ELEAIKTAKLDNDQLALNQHSIALRGIYLKHNVNPFAIFILPLTQSAVFFSFFYAIRKMS 184 Query: 449 -ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 +S++ W KDL+ DP I PII + MF M+M Sbjct: 185 RLSVDGFTTGGLAWFKDLSIPDPYC-------------------ILPIINAGLMFSGMQM 225 Query: 508 SPPPADKGQAMILNWMPVVFV------FALSSFPAGLIIYWSWSNVISIVQQAVI 556 + NW F+ + PA + +YW S++ +IVQ ++ Sbjct: 226 NRANTASTIGNSTNWRTFFFLCCLLSPLLTAKLPAAIFMYWIPSSLFNIVQGYIL 280 >gi|317500881|ref|ZP_07959093.1| hypothetical protein HMPREF1026_01036 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089217|ref|ZP_08338119.1| hypothetical protein HMPREF1025_01702 [Lachnospiraceae bacterium 3_1_46FAA] gi|316897761|gb|EFV19820.1| hypothetical protein HMPREF1026_01036 [Lachnospiraceae bacterium 8_1_57FAA] gi|330405769|gb|EGG85298.1| hypothetical protein HMPREF1025_01702 [Lachnospiraceae bacterium 3_1_46FAA] Length = 441 Score = 78.9 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 12/102 (11%) Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPP-----------PADKGQAMILNWMPVVFVFAL 531 + G + + P++ L+ FI +K+S P + MP++ V Sbjct: 247 SIAGVIIAVLIPVLAGLTQFISVKLSQAGAGGAAMSDDNPMAASMKTMTYTMPLISVVFG 306 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + PAGL +YW S + VQQ + K + + D ++ Sbjct: 307 FTLPAGLGLYWVASAAVRSVQQLAVNKYLSKK-SIDDIIKEN 347 Score = 48.1 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 5/128 (3%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 ++ I + + + M + + + + N G+AI++ T+ V L PL KQ T Sbjct: 12 YDWPIIKQVSWLLGQVMNGIYNALSAIGIENIGVAIIVFTIIVYTLLLPLTIKQQKFTKM 71 Query: 389 MKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +QP+I ++++++ Q Q+ M +Y + + +GC P LLQ+ F +Y Sbjct: 72 SAVMQPEIQKIQKRYANKKDQASMLKQQEEMNMVYDKYGLKMSSGCLPSLLQLVFLFGLY 131 Query: 445 KVISISLE 452 V+ E Sbjct: 132 PVVQNIPE 139 >gi|325185413|emb|CCA19898.1| mitochondrial inner membrane protein OXA1 putative [Albugo laibachii Nc14] Length = 362 Score = 78.9 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 36/212 (16%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK-----QSPPQVLQKA 414 + I ++TV V+ + + K + A +K IQPK+++L+E+ + Q+ Sbjct: 108 WWATIAVSTVIVRSVMIYPSIKGIRNAAKLKIIQPKLEKLKEEMEVGPRTPEKVIDFQRK 167 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL---EMRHAPFWGWIKDLAAADPT 471 L ++++ G + L QIP+F + + E W DL AADPT Sbjct: 168 YKALMSANDVSIFRGLYVPLFQIPMFLGFFWGLRELPKYYESCKEGGALWFTDLGAADPT 227 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK------MSPPPADKGQAMI-LNWMP 524 I P++ + M + ++ ++ DK I + M Sbjct: 228 Y-------------------ILPVLNAALMLVAVETGSEGGLNNDMRDKM--KIGMRCMS 266 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V+ + F GL ++W SN S+ Q A++ Sbjct: 267 VLMIPFTMHFETGLFVFWIASNTCSLAQSAML 298 >gi|302672310|ref|YP_003832270.1| membrane insertion protein [Butyrivibrio proteoclasticus B316] gi|302396783|gb|ADL35688.1| membrane insertion protein [Butyrivibrio proteoclasticus B316] Length = 436 Score = 78.9 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 17/119 (14%) Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK------------GQA 517 P + +L F V + P++ + + ++ K+ P D Q Sbjct: 240 PMYMIQTAFANKNFLLFFGGVMV-PVLAAFTQWVNTKLMPQNTDPNAKLDPNDPAAQMQQ 298 Query: 518 MI--LNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + +N M P++ F S PAG+ +YW VI +QQ VI + H + + + Sbjct: 299 SMKTMNIMMPLMSAFFCLSLPAGMGVYWIAGAVIRSIQQIVINR-HIDKTDIDAEIAKN 356 Score = 48.1 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 4/97 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412 + N G+AI++ T+ + L PL KQ + + P++ +++K+K +Q Sbjct: 37 IPNIGLAIIIFTIVIYLCLLPLTYKQQKFSKLQAKMSPELKAIQDKYKGKKDNDSMLAMQ 96 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +LY + ++ C +++Q+P+ FA+Y+VIS Sbjct: 97 AETKELYAKYGVSQTGSCLQLIIQMPILFALYRVISN 133 >gi|329767321|ref|ZP_08258846.1| hypothetical protein HMPREF0428_00543 [Gemella haemolysans M341] gi|328836010|gb|EGF85701.1| hypothetical protein HMPREF0428_00543 [Gemella haemolysans M341] Length = 295 Score = 78.9 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 46/250 (18%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 ++ KPM + +S + G++G +I++ T+ ++LL P Y + Q Sbjct: 28 TFYEIFVKPMDLSLSKIHEYTGSWGWSIVIITLVIRLLVLPFMLNNYKVQNKSRKGQELA 87 Query: 397 DELREK----------------------FKQSPPQVLQKAMIQLYKTHNINPLA--GCWP 432 E +S LQ+ + + K ++ PL+ GC P Sbjct: 88 RPELEVVQKKQKAAKEKEARAISNEEKMQARSELMELQREQMAIMKKYDAMPLSLGGCLP 147 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+ +P ++ +S L T G+ + I Sbjct: 148 MLIPLPFLTGLFYTLSNPLYSAG---------------ITESTFLGVFNLGTRSYTLPII 192 Query: 493 WPIIMSLSMFIQMKMSPPPADK-------GQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 I+ ++ + MK+ P P M+ P++ + +Y+ Sbjct: 193 AFIVYAIQTTLTMKLMPTPTQPGQEQMQSQMQMMQWLSPIMITVFSFLVAGAVAVYYIVG 252 Query: 546 NVISIVQQAV 555 + I Q + Sbjct: 253 GIFMIFQTYL 262 >gi|160946600|ref|ZP_02093803.1| hypothetical protein PEPMIC_00558 [Parvimonas micra ATCC 33270] gi|158446984|gb|EDP23979.1| hypothetical protein PEPMIC_00558 [Parvimonas micra ATCC 33270] Length = 233 Score = 78.9 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 96/236 (40%), Gaps = 35/236 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F + FI + + ++ + + I+I++ ++ K++ FP+ + Sbjct: 3 FLRNLMGSVLKFIYEGVASILPNEPSSISYLAISIIIISIIFKVVLFPIFLSSIKNQKIQ 62 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + ++REK+ + Q + +++ K H I L GC P++ + + A++ V+ Sbjct: 63 AKFAKEQQKIREKY-KHDQQAMNLKLMEFNKEHGIKQLGGCLPMIFNLILVLAMFAVMRE 121 Query: 450 SL-------EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 L + WIKDL+A DP + P+I +++ + Sbjct: 122 PLLYIFGDANANVMKNFLWIKDLSAPDP------------------LLYGLPLINAVTQY 163 Query: 503 IQ-------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 I K +P K + P + + SF AGL +YW+ +N++ I+ Sbjct: 164 IYLDLSNRDQKDNP--GAKSMETMKYIFPFIIFISAKSFSAGLALYWAMTNIVEIL 217 >gi|24380099|ref|NP_722054.1| OxaA-like protein precursor [Streptococcus mutans UA159] gi|38503007|sp|Q8DSP8|OXAA2_STRMU RecName: Full=Membrane protein oxaA 2; Flags: Precursor gi|24378095|gb|AAN59360.1|AE015001_5 putative inner membrane protein [Streptococcus mutans UA159] Length = 310 Score = 78.5 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 100/255 (39%), Gaps = 31/255 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN----MKN 391 W + +F A ++ NL FG AI++ TV V+LL PL Q M Sbjct: 37 WVYKFFAAPMGSVIQYLANNLGLGFGFAIIIVTVIVRLLILPLGLSQVRKMTYQSEKMAY 96 Query: 392 IQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLA--GCWPILLQIPVFFAIYK 445 ++P D ++E+ K + Q + ++Q + + ++ GC P+L+Q+P F A+Y Sbjct: 97 LKPVFDPIQERMKNAKTQEEKMAAQTELMQAQRHYGMSMFGGLGCLPLLIQMPFFSALYI 156 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + A F + P + I I+ + ++ Sbjct: 157 STRYTKGIASAS-------------------FLGIKLGSPNMIITVIIGILYLVQSWVST 197 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P + ++ MP++ V PAG +YW S + ++QQ + H + Sbjct: 198 LSVPEAQRQQTRNMMFMMPIMMVMISIGAPAGGALYWLVSGIFGLIQQLITN--HIIKPK 255 Query: 566 LIDRLRSTFSKNYNS 580 L ++ F KN Sbjct: 256 LRKQIDEEFKKNPPK 270 >gi|169351635|ref|ZP_02868573.1| hypothetical protein CLOSPI_02416 [Clostridium spiroforme DSM 1552] gi|169291857|gb|EDS73990.1| hypothetical protein CLOSPI_02416 [Clostridium spiroforme DSM 1552] Length = 289 Score = 78.5 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 109/243 (44%), Gaps = 28/243 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + P+ + + VGN I ++ T+ V L+ P+ K VST ++ +QP+++ Sbjct: 55 FDFLFVIPIAKGILFINQYVGNVAIGVIGVTIVVNLITLPIMVKSTVSTQKIQLLQPEME 114 Query: 398 ELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +++ K++ Q + LYK HN++ + G + L +P+ A+++ + + Sbjct: 115 KIQNKYRGRKDQASQMRQNAEIQNLYKKHNVS-MFGSFATFLTLPIMIAMWQAVQRIDIL 173 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF-------IQMK 506 +G +L ++I + + ++++++ + I K Sbjct: 174 YKTSLFG--INLGEKPISHIMEFS----------IEYIVLLLLVAVTQYFAVQISQIMAK 221 Query: 507 MSPP--PADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 SP P+ + Q M + N M + V+ ++ PA + +YW +N+I IV+ I H Sbjct: 222 RSPRYRPSQQMQTMNTMNNVMTLFIVYLAATMPAAMSLYWITTNIIGIVRTVYIQFFHIE 281 Query: 563 EIG 565 ++ Sbjct: 282 KVK 284 >gi|281210233|gb|EFA84401.1| putative oxidase assembly protein [Polysphondylium pallidum PN500] Length = 388 Score = 78.5 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 89/245 (36%), Gaps = 27/245 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 F + + N + + I+ TV ++ + P K S M+ ++ ++++ Sbjct: 109 NFNNSIIESFNQFSVNTGIPWWLCIVGATVALRFVILPFTVKTQRSQVKMQKVREEMEKN 168 Query: 400 REKFKQSPPQVLQKA--MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS----LEM 453 + ++ A +L K H ++ L+ L Q P + + ++ + + Sbjct: 169 AHLNDGTMEGRMKMASLQSELSKKHGVSALSMMGLGLAQAPFYIYFFVLVRSACMDFPQY 228 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W KDL+ DPT I P+ S ++MS Sbjct: 229 VSNGGALWFKDLSVMDPTY-------------------ILPVASSFLQLQSVRMSFNETT 269 Query: 514 K-GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 +I N + V +F F AGL +YW ++++ ++Q + K + + + Sbjct: 270 PLIMKIIFNGLCFVPLFFTLKFAAGLNVYWCINSLLFVIQNYL-FKQNSVKKFFNIPIVE 328 Query: 573 TFSKN 577 +K Sbjct: 329 ESAKK 333 >gi|238503221|ref|XP_002382844.1| mitochondrial export translocase Oxa1, putative [Aspergillus flavus NRRL3357] gi|220691654|gb|EED48002.1| mitochondrial export translocase Oxa1, putative [Aspergillus flavus NRRL3357] Length = 467 Score = 78.5 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 111/311 (35%), Gaps = 40/311 (12%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 ++ + + ++ S H A+F++ + T A ++ + ++ Sbjct: 19 NQSLAGNLSWRPASSIHHASAARFNSTASAASASTATAATAVETAAPEQASDLSDFDITA 78 Query: 326 AIPRFEMLIDW--GWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQ 382 + L D + + + + + +F+ G A I+ T + V+L Sbjct: 79 IPEKIGYLKDLGLDYGWGPSSMIEYFIEHFHIWAGLPWWASIVGTGLLVRLALLKPMLSA 138 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILL 435 + + N++ + LR K Q+ + M+Q L+ H I + Sbjct: 139 ADVSTKIHNLKDVVAPLRAKMAQAANEKRHADMMQTRAELQQLHSDHGIK-FYKTMIPFI 197 Query: 436 QIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 Q+P+ F Y+V+ + A GWIKDL ADP Sbjct: 198 QLPLGFGCYRVVKGMTSLPVPGLAAESVGWIKDLTVADPYF------------------- 238 Query: 492 IWPIIMSLSMFIQMK------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + P + +M++ K M+ +L MP +S FP+ L +Y+ + Sbjct: 239 LLPAATAFAMYMSFKKGGENGMNQMANSPVGRAVLYGMPAFSFAFMSFFPSALQLYFLST 298 Query: 546 NVISIVQQAVI 556 + ++ Q ++ Sbjct: 299 GLFALGQAYML 309 >gi|83771459|dbj|BAE61591.1| unnamed protein product [Aspergillus oryzae] Length = 467 Score = 78.1 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 111/311 (35%), Gaps = 40/311 (12%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 ++ + + ++ S H A+F++ + T A ++ + ++ Sbjct: 19 NQSLAGNLSWRPASSIHHASAARFNSTASAASASTATAATAVETAAPEQASDLSDFDITA 78 Query: 326 AIPRFEMLIDW--GWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQ 382 + L D + + + + + +F+ G A I+ T + V+L Sbjct: 79 IPEKIGYLKDLGLDYGWGPSSMIEYFIEHFHIWAGLPWWASIVGTGLLVRLALLKPMLSA 138 Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILL 435 + + N++ + LR K Q+ + M+Q L+ H I + Sbjct: 139 ADVSTKIHNLKDVVAPLRAKMAQAANEKRHADMMQTRAELQQLHSDHGIK-FYKTMIPFI 197 Query: 436 QIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 Q+P+ F Y+V+ + A GWIKDL ADP Sbjct: 198 QLPLGFGCYRVVKGMTSLPVPGLAAESVGWIKDLTVADPYF------------------- 238 Query: 492 IWPIIMSLSMFIQMK------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + P + +M++ K M+ +L MP +S FP+ L +Y+ + Sbjct: 239 LLPAATAFAMYMSFKKGGENGMNQMANSPVGRAVLYGMPAFSFAFMSFFPSALQLYFLST 298 Query: 546 NVISIVQQAVI 556 + ++ Q ++ Sbjct: 299 GLFALGQAYML 309 >gi|289619151|emb|CBI54419.1| unnamed protein product [Sordaria macrospora] Length = 460 Score = 78.1 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 74/243 (30%), Gaps = 39/243 (16%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML-TTVFVKLLFFPLAKKQYVSTA 387 F + + + + M L + Y G A + V++ F + + Sbjct: 116 GFLKTLGLDYGWGVTSMMQWLTEHVYVYSGLPWWATLAAVAAIVRISIFKPSLNSSQESQ 175 Query: 388 NMK------NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQI 437 M+ + +++E + Q + M + K IN + +Q+ Sbjct: 176 KMQDLNKDPRYAAIMAKVKEASWDTSKQNDLMKYRAEMANMTKAAGINYFK-VFIPFVQV 234 Query: 438 PVFFAIYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 P+ F ++++I +E W DL ADP Sbjct: 235 PIGFGMFRLIRGMAALPVESMETGGTLWFPDLTVADPYF-------------------AL 275 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS----SFPAGLIIYWSWSNVIS 549 PI + M+ P Q ++ M VV V PA L Y+ S + Sbjct: 276 PIASACLFVASMRKPIPYMAPQQGRMMKSMAVVLVPISIFATAWLPAALQWYFLVSAIGQ 335 Query: 550 IVQ 552 Q Sbjct: 336 YFQ 338 >gi|239624140|ref|ZP_04667171.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239520526|gb|EEQ60392.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 440 Score = 78.1 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 98/345 (28%), Gaps = 28/345 (8%) Query: 260 ASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL--PGKSITTTNFLFAGAKEFPT 317 +I F S F + G + I + ++ + Sbjct: 23 ILGWIMDWLFKFTSFFGIENIGLCIILFTLVTKVLMIPLTIKQQQSSKLMAVMQPEISAI 82 Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 Y+ ++ M++ K + L+ I L V + + Sbjct: 83 QKKYKGKENDQKYAMMMQTEIKAVYEKYGTSMTGGCLPLLIQMPIIFALYRVIYNIPAYV 142 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL-- 435 + + Y I + + QK I + N+N + Sbjct: 143 QSVRGY----YETIISKLPSGYQTAQAFTDLAAAQKMPIDKFDYTNVNTVIDLLYKFTGQ 198 Query: 436 QIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY---------LPG 486 Q + + ++ I+++ NI + L Sbjct: 199 QWDTLVTSFASVGQAVTDTGVRVVDAIENMQTFFGLNIAYTPFQVIMNYFNKVEGTTLLT 258 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPP----------PADKGQAMILNWMPVVFVFALSSFPA 536 + P+ LS + K+ PA + MP++ VF SF + Sbjct: 259 AIAALCIPLFAGLSQWYSTKLMTANQPQTNSDENPAAGMMKSMNVTMPLMSVFFCFSFAS 318 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 G+ +YW +V +I+QQ I + ++ + D ++ K + Sbjct: 319 GIGLYWVAQSVFTIIQQVGIN-SYLNKVNIDDLVQKNIDKTNKKR 362 >gi|261884238|ref|ZP_06008277.1| putative inner membrane protein translocase component YidC [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 67 Score = 78.1 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 32/54 (59%) Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 D Q I+ ++P++F F +FPAGL +YW +N+ S+ QQ V+ K+ + Sbjct: 4 TDPMQEKIMKFLPLIFTFFFVTFPAGLTLYWFINNLCSVAQQLVVNKIFKKQKE 57 >gi|290579922|ref|YP_003484314.1| putative inner membrane protein [Streptococcus mutans NN2025] gi|254996821|dbj|BAH87422.1| putative inner membrane protein [Streptococcus mutans NN2025] Length = 284 Score = 78.1 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 100/255 (39%), Gaps = 31/255 (12%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN----MKN 391 W + +F A ++ NL FG AI++ TV V+LL PL Q M Sbjct: 11 WVYKFFAAPMGSVIQYLANNLGLGFGFAIIIVTVIVRLLILPLGLSQVRKMTYQSEKMAY 70 Query: 392 IQPKIDELREKFKQSPPQVLQK----AMIQLYKTHNINPLA--GCWPILLQIPVFFAIYK 445 ++P D ++E+ K + Q + ++Q + + ++ GC P+L+Q+P F A+Y Sbjct: 71 LKPVFDPIQERMKNAKTQEEKMAAQTELMQAQRHYGMSMFGGLGCLPLLIQMPFFSALYI 130 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + A F + P + I I+ + ++ Sbjct: 131 STRYTKGIASAS-------------------FLGIKLGSPNMIITVIIGILYLVQSWVST 171 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 P + ++ MP++ V PAG +YW S + ++QQ + H + Sbjct: 172 LSVPEAQRQQTRNMMFMMPIMMVMISIGAPAGGALYWLVSGIFGLIQQLITN--HIIKPK 229 Query: 566 LIDRLRSTFSKNYNS 580 L ++ F KN Sbjct: 230 LRKQIDEEFKKNPPK 244 >gi|104774337|ref|YP_619317.1| hypothetical protein Ldb1491 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514432|ref|YP_813338.1| preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423418|emb|CAI98291.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093747|gb|ABJ58900.1| Preprotein translocase subunit YidC [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126132|gb|ADY85462.1| Membrane protein oxaA 2 [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 320 Score = 77.7 bits (189), Expect = 5e-12, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 95/268 (35%), Gaps = 39/268 (14%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNF-------GIAIMLTTVFVKLLFFPLAKKQYV 384 G +Y+I + + + + + + + G AI++ T+ V+++ PL Q Sbjct: 35 KAPTSGPYYWIYEWIGLPLQHITVNIAHAIGGASGAGWAIVIITLVVRVILMPLMLSQQH 94 Query: 385 STANMKNIQPKIDELREK---------FKQSPPQVLQKAMIQLYKTHNINPL--AGCWPI 433 + + + L ++Y +N++ GC P+ Sbjct: 95 KATLQQEKMHLLQPQMQLLQKAMKTPGMTPDQQMALTGLQREIYSKNNVSMTGGMGCLPL 154 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 L+Q+P+ IY+ ++ S + + F+G + + I Sbjct: 155 LIQMPIMIGIYQAVAYSNALAKSTFFG-------------------ISLSSKSMVLAIIA 195 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + + ++ M P K + P++ +F SF L +YW+ N++ ++QQ Sbjct: 196 TVFALIQSYVAMIGIPEEQKKTMQATMLMNPIMTLFFSMSFSGTLALYWAVGNLVMVIQQ 255 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + R+ + + + Sbjct: 256 LITT--FIVQPRAKKRVSKELADSPIVE 281 >gi|16904212|gb|AAL30813.1|AF435863_1 mitochondrial export translocase Oxa1 [Neurospora crassa] Length = 462 Score = 77.7 bits (189), Expect = 5e-12, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 73/243 (30%), Gaps = 39/243 (16%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL-----LFFPLAKKQY 383 F + + + + M L + Y G A + + +++ Sbjct: 118 GFLKTLGLDYGWGVTSMMQWLTEHVYVYSGLPWWATLAAVAAIVRVAIFKPSLGASQESQ 177 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQV------LQKAMIQLYKTHNINPLAGCWPILLQI 437 KN + + K ++ M + K IN + +Q+ Sbjct: 178 KMQDLNKNPKYAAIMAKVKEASFDTTKQNDLVKYRQEMALMTKNAGINYFK-VFIPFIQV 236 Query: 438 PVFFAIYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 P+ F ++++I +E W DL ADP Sbjct: 237 PIGFGMFRLIRGMAALPVESLETGGTLWFPDLTVADPYF-------------------AL 277 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFV----FALSSFPAGLIIYWSWSNVIS 549 PI + M+ P QA ++ M +V V FA + PA L Y+ S + Sbjct: 278 PIASACLFVASMRKPIPYMAPQQARMMKSMGLVLVPVSIFATAWLPAALQWYFLVSAIGQ 337 Query: 550 IVQ 552 Q Sbjct: 338 YFQ 340 >gi|308504846|ref|XP_003114606.1| hypothetical protein CRE_28281 [Caenorhabditis remanei] gi|308258788|gb|EFP02741.1| hypothetical protein CRE_28281 [Caenorhabditis remanei] Length = 368 Score = 77.7 bits (189), Expect = 5e-12, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 85/244 (34%), Gaps = 37/244 (15%) Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 E L W W+ + + L +L + + I+ T+ ++ L + Sbjct: 74 GESVLEELGLWSWWKPSSYFRWALEGMHVHLDLPWWLTIVAATLTLRALLVGVPVMSQKL 133 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMI-------QLYKTHNINPLAGCWPILLQIP 438 A + +++E R++ ++ + Q ++ +I + Sbjct: 134 VAKQSMYRKEMNEFRDRIDEARKENNQLLQQQILLEQRDFLRSKDIRLGRQFLVMAANGA 193 Query: 439 VF----FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 VF FAI K+I+++ W DL A DP P Sbjct: 194 VFATQFFAIKKMIAVNYPGLSTGGILWFTDLTATDPYY-------------------ALP 234 Query: 495 IIMSLSMFIQMKM------SPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNV 547 I + +M + K+ S +++ +PVV S F GL +YW+ SN Sbjct: 235 FISAATMALVTKVGIEMGTSADQMPPIMRAFMSYGLPVVIFGVSSQFATGLCVYWTASNA 294 Query: 548 ISIV 551 +S++ Sbjct: 295 VSLI 298 >gi|290960105|ref|YP_003491287.1| membrane-protein-insertion protein [Streptomyces scabiei 87.22] gi|260649631|emb|CBG72746.1| putative membrane-protein-insertion protein [Streptomyces scabiei 87.22] Length = 279 Score = 77.7 bits (189), Expect = 5e-12, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 24/212 (11%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 AI+L T V+LL PL++ +QP+I ELR+K ++P + LQKAM++L+ Sbjct: 24 TAFAIILFTALVRLLVHPLSRAAARGQRARVALQPQIAELRKKHAKNPEK-LQKAMMELH 82 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA--DPTNIFTLF 477 ++PL+GC P L Q+P FF +Y + S A K AA D + Sbjct: 83 TKEKVSPLSGCLPSLCQLPAFFLLYHLFSNRTIGGEANALLTHKLFAAPLGDRWHDALGE 142 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMF---IQMKM-------SPPPAD---KGQAMIL---- 520 G L F G +++G++ I+ ++ F +M P +D G A + Sbjct: 143 GGL-FGPQGLVYLGLFVIVAGVATFNFRRTKRMMAAGTAGMPAVSDDQVPGMAASMGAVS 201 Query: 521 NWMPVVFVFALSS---FPAGLIIYWSWSNVIS 549 +MP + F L S P +Y S S Sbjct: 202 KFMPFMSFFTLLSVAVVPLAAALYVVTSTTWS 233 >gi|325265447|ref|ZP_08132170.1| membrane protein insertase, YidC/Oxa1 family [Clostridium sp. D5] gi|324029305|gb|EGB90597.1| membrane protein insertase, YidC/Oxa1 family [Clostridium sp. D5] Length = 429 Score = 77.7 bits (189), Expect = 5e-12, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 7/89 (7%) Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQ-----AMILNW-MPVVFVFALSSF 534 F + G + I PI+ L+ F+ +K+ P P D + + MP+ VF + Sbjct: 247 FSIIGIILAVIIPIMAGLTQFLSVKLQPQPQVDPSNTMANSMKTMTYTMPLFSVFMGFTL 306 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 PAGL +YW+ S ++ VQQ I K G + Sbjct: 307 PAGLGLYWAISALVRCVQQLAINKYLGKK 335 Score = 55.8 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 4/97 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412 + N GI I+L T+ + L PL KQ + + P+I ++++K+ Q Q Sbjct: 39 IQNIGICIILFTIVIYTLMIPLTIKQQKWSKMSSVMNPEIQKIQKKYANKKDQASMLKQQ 98 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + M +Y+ + +P GC P+L+Q+PV FA+Y VI Sbjct: 99 EEMQAIYEKYGTSPTGGCLPMLIQMPVLFALYPVIQN 135 >gi|302657900|ref|XP_003020661.1| mitochondrial export translocase Oxa1, putative [Trichophyton verrucosum HKI 0517] gi|291184517|gb|EFE40043.1| mitochondrial export translocase Oxa1, putative [Trichophyton verrucosum HKI 0517] Length = 468 Score = 77.3 bits (188), Expect = 6e-12, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 84/244 (34%), Gaps = 38/244 (15%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + + + + L+ + G + T V ++++ F + +K Sbjct: 107 KELGLDYGWGPSSMVQFLLETLHITGGLPWWTATVATAVLIRVVLFNSIVSSAEVSTKLK 166 Query: 391 NIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 ++P+ +RE+ + + + L + H I P LLQIP+ F Sbjct: 167 ALKPRTTPIRERVMHCVRENDNVGALKAKNELALLNQEHGIKPWKAFL-PLLQIPLGFGC 225 Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 ++V+ + W++D+ DP P Sbjct: 226 FRVLRGMSALPVPGLDNESVLWLQDVTMPDPYY-------------------ALPFATGA 266 Query: 500 SMFIQMKMSPPP-----ADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MF+ ++ + I+ + +P+V ++ +P L +Y+ + +S+ Q Sbjct: 267 LMFVALRRGGDTGLSNLMNSTLGKIMVYSLPIVTALTMTFWPGILQLYFLTTGALSVCQT 326 Query: 554 AVIM 557 ++ Sbjct: 327 YIMT 330 >gi|212704003|ref|ZP_03312131.1| hypothetical protein DESPIG_02056 [Desulfovibrio piger ATCC 29098] gi|212672508|gb|EEB32991.1| hypothetical protein DESPIG_02056 [Desulfovibrio piger ATCC 29098] Length = 846 Score = 77.3 bits (188), Expect = 6e-12, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 25/214 (11%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + N+G++I++ + + F PL + + A K +Q + + + Sbjct: 15 IYRAIYLGSLQFTHNYGLSILVLSCISAVAFIPLGRLAVGTQAREKKLQMIMAPQLARIR 74 Query: 405 QSPPQVLQKAMIQ-LYKTHNINPL---AGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 + ++ I LYK + +PL + + LQIP Y +I +++ P Sbjct: 75 KESKGAERQRRINNLYKRYAYHPLLAVRSAFGVALQIPFLTGAYYMILGLTQLQGQP-CL 133 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP--PPADKGQAM 518 I DL+ D V PI+M++ I +P D QA+ Sbjct: 134 MIPDLSQPD---------------GLLWGVNALPIVMTVVNIIATLTTPGLTRKDTLQAI 178 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 I+ + F+ L + + L+I+W+ +NV ++Q Sbjct: 179 IIAF---FFLALLYNAASALLIFWTMNNVFFLLQ 209 >gi|308190321|ref|YP_003923252.1| inner membrane protein translocase component [Mycoplasma fermentans JER] gi|307625063|gb|ADN69368.1| inner membrane protein translocase component [Mycoplasma fermentans JER] Length = 605 Score = 77.3 bits (188), Expect = 6e-12, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 98/249 (39%), Gaps = 36/249 (14%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P F + + + + M ++ + IA+++T + + + Q Sbjct: 355 PFFGLFVHPIAWLTGSMRENMPSLAGWSTIFVIIIAVVITRLLALAITWKSQVNQSKQED 414 Query: 388 NMKNIQPKIDELRE-KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 + + K + Q+ + LYK +NINPL I++ P+F A+++V Sbjct: 415 IKAKKAKIDAKYADFKGNKQMKIRHQQEIAALYKKNNINPLDAFLNIIISFPIFIAMWRV 474 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM- 505 I EM+ + G D AA T+ LF + ++GI + +++ F Sbjct: 475 IQSIPEMKSTHWLG--MDFAA---TSWKRLF------AGEWAYLGILVVALAV-QFFSQF 522 Query: 506 ------------------KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + + ++K Q +I+ +VF+F F G+ +YW +S + Sbjct: 523 TPRLLNRKKFKERTTIEEEKALKKSNKTQNIIM----IVFLFITLMFSCGVQVYWIFSGL 578 Query: 548 ISIVQQAVI 556 +I+Q I Sbjct: 579 WNIIQTISI 587 >gi|224541285|ref|ZP_03681824.1| hypothetical protein CATMIT_00445 [Catenibacterium mitsuokai DSM 15897] gi|224525789|gb|EEF94894.1| hypothetical protein CATMIT_00445 [Catenibacterium mitsuokai DSM 15897] Length = 293 Score = 77.3 bits (188), Expect = 6e-12, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 102/235 (43%), Gaps = 28/235 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + + P+ + + GN ++L T+ + L+ P+ K +ST M+ +QP+++ Sbjct: 55 FDFILTIPIAKGILLITSWTGNVLWGVILMTILINLIILPVMIKSTISTQKMQMLQPEME 114 Query: 398 ELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 ++ K++ Q +Q ++ LYK +N++ + G L +P+ FA+Y + + Sbjct: 115 RIQNKYRGKNDQTSQMRMQNEIMNLYKKNNVS-MFGSLWTFLTLPIMFAMYGAVQRIQIL 173 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP---- 509 + +G L L G + ++M+LS F ++++ Sbjct: 174 YTSQAFGMNLGLT------------PLSQITSGKFIYIVVILVMALSQFFAIEINNLMLK 221 Query: 510 ------PPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P A + Q +N M ++ ++ P + YW +N+I++V+ I Sbjct: 222 RNKKYKPSAQQNQMKTMNIVMTLMIIYFGLIMPTAMSFYWITTNLITVVRTVFIQ 276 >gi|319777717|ref|YP_004137368.1| hypothetical protein MfeM64YM_0996 [Mycoplasma fermentans M64] gi|318038792|gb|ADV34991.1| Conserved Hypothetical Protein [Mycoplasma fermentans M64] Length = 605 Score = 77.3 bits (188), Expect = 6e-12, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 98/249 (39%), Gaps = 36/249 (14%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P F + + + + M ++ + IA+++T + + + Q Sbjct: 355 PFFGLFVHPIAWLTGSMRENMPSLAGWSTIFVIIIAVVITRLLALAITWKSQVNQSKQED 414 Query: 388 NMKNIQPKIDELRE-KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 + + K + Q+ + LYK +NINPL I++ P+F A+++V Sbjct: 415 IKAKKAKIDAKYADFKGNKQMKIRHQQEIAALYKKNNINPLDAFLNIIISFPIFIAMWRV 474 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM- 505 I EM+ + G D AA T+ LF + ++GI + +++ F Sbjct: 475 IQSIPEMKSTHWLG--MDFAA---TSWKRLF------AGEWAYLGILVVALAV-QFFSQF 522 Query: 506 ------------------KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + + ++K Q +I+ +VF+F F G+ +YW +S + Sbjct: 523 TPRLLNRKKFKERTTIEEEKALKKSNKTQNIIM----IVFLFITLMFSCGVQVYWIFSGL 578 Query: 548 ISIVQQAVI 556 +I+Q I Sbjct: 579 WNIIQTISI 587 >gi|225575686|ref|ZP_03784296.1| hypothetical protein RUMHYD_03779 [Blautia hydrogenotrophica DSM 10507] gi|225037090|gb|EEG47336.1| hypothetical protein RUMHYD_03779 [Blautia hydrogenotrophica DSM 10507] Length = 429 Score = 77.3 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 14/153 (9%) Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F VI + + ++A T I + FG + + + P++ L Sbjct: 210 FAGFSDVIQSTASSLSDMQIFGVLNIADQPLTIIKSAFGSGSWLV--LAAAVLVPLLAWL 267 Query: 500 SMFIQMKMSPPPADK-----------GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 + ++ ++ P + + MPV + P G+ IYW VI Sbjct: 268 TQWLNFRLMPTASQNNNNNKDNPMMNSMKTMNTIMPVFSAVMCLTLPVGIGIYWISGAVI 327 Query: 549 SIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 VQQ +I + +I + + K + Sbjct: 328 RSVQQVIINRHMS-KIDMQVLIEENMKKAEKKR 359 Score = 53.1 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 61/116 (52%), Gaps = 5/116 (4%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 +I +F +++ + + N G+ I++ T+ + LL PL KQ + +QP+I Sbjct: 19 SVLGWIMDGIFKVLNSMFG-IENIGLCIIIFTILMYLLMTPLQIKQQKFSKLSAVMQPEI 77 Query: 397 DELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 ++++K++ Q+ + M + +Y+ + ++P C + +Q P+ A+++VI Sbjct: 78 TKIQKKYQGKRDQISMQKMQEETSLVYQKYGVSPTGSCVQLAIQFPILMALWQVIY 133 >gi|154503054|ref|ZP_02040114.1| hypothetical protein RUMGNA_00876 [Ruminococcus gnavus ATCC 29149] gi|153796295|gb|EDN78715.1| hypothetical protein RUMGNA_00876 [Ruminococcus gnavus ATCC 29149] Length = 432 Score = 77.3 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 11/109 (10%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP-------PADKG---QAMILNWM 523 + + F + G + I PI+ L+ FI +K+ P + + M Sbjct: 239 MLMDALKDFSIVGIILAVIIPIMAGLTQFISVKLMQQQQTTTIDPDNPMARSMNSMNYIM 298 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 P+ VF + PAGL +YW+ S ++ VQQ I K + + + + Sbjct: 299 PLFSVFMGFTLPAGLGLYWAISAIVRCVQQMAINKYLSKK-SVEEMIEE 346 Score = 45.8 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 9/126 (7%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNL-----VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 DW IA LM YN + N GI I+L T+ + L PL KQ + Sbjct: 10 AADWPIVGQIAWVFGKLMDAIYNFLNLFGIQNIGICIILFTIIIYTLMIPLTIKQQKFSK 69 Query: 388 NMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + P+I +L++K+ Q +Q+ +Y+ + +P GC P+++Q+P+ FA+ Sbjct: 70 MQSVMMPEIQKLQKKYAGKRDQASMLKMQEEQQLIYEKYGSSPTGGCLPMVIQLPILFAL 129 Query: 444 YKVISI 449 Y VI Sbjct: 130 YPVIQE 135 >gi|15225991|ref|NP_182170.1| OXA1L (INNER MEMBRANE PROTEIN OXA1-LIKE) [Arabidopsis thaliana] gi|38372506|sp|Q9SKD3|OXA1L_ARATH RecName: Full=Mitochondrial inner membrane protein OXA1-like; Flags: Precursor gi|4559387|gb|AAD23047.1| putative cytochrome oxidase biogenesis protein [Arabidopsis thaliana] gi|19347873|gb|AAL85994.1| putative cytochrome oxidase biogenesis protein [Arabidopsis thaliana] gi|24030491|gb|AAN41393.1| putative cytochrome oxidase biogenesis protein [Arabidopsis thaliana] gi|26450688|dbj|BAC42453.1| putative cytochrome oxidase biogenesis protein [Arabidopsis thaliana] gi|330255608|gb|AEC10702.1| inner membrane OXA1-like protein [Arabidopsis thaliana] Length = 431 Score = 77.3 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 90/235 (38%), Gaps = 32/235 (13%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E+ I F + L+ ++ G N+ +I LTTV ++ + P+ Q +T + Sbjct: 125 EVAIAAADSAFPVAALQHLIDAVHSFTGLNWWASIALTTVLIRGVTIPILLNQLKATYKL 184 Query: 390 KNIQPKIDELRE----KFKQSPPQVLQKAMIQL-YKTHNINPLAGCWPILLQIPVFFAIY 444 ++P+++ELR+ K + + +QL +K H + P +++Q P+F + + Sbjct: 185 NVLRPQLEELRQEMSTKAQDPEAMAEGQRRMQLLFKEHGVTPFTPLKGLIIQGPIFISFF 244 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-YLPGFMHVGIWPIIMSLSMFI 503 I E F G L F L I P++ +++ I Sbjct: 245 FAIRNMAE-----------------KVPSFKTGGTLWFTDLTTTDTTYILPLLTAVTFLI 287 Query: 504 QMKMSPP---PADKGQAMILNWMPVVFVFALSSFPAG----LIIYWSWSNVISIV 551 ++ + + A + + F G L YW SN+ ++V Sbjct: 288 MVESNMQEGLEGNPV-AGTMKKFSRIIAFLSIPVLIGIEKALFCYWLTSNLFTLV 341 >gi|238926050|ref|YP_002939568.1| stage III sporulation protein J [Eubacterium rectale ATCC 33656] gi|238877727|gb|ACR77434.1| stage III sporulation protein J [Eubacterium rectale ATCC 33656] Length = 442 Score = 77.3 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 11/127 (8%) Query: 443 IYKVISISLEMRHAP--FWGWIKDLAAADP--TNIFTLFGILPFYLPGFMHVGIW-PIIM 497 + I ++E H + + L +D I + F P F+ + + P++ Sbjct: 225 FFDGIQSAVEKTHDALLHFNYFLGLNISDTPWYIIKSNFTDKPDKWLLFVILALLIPVLS 284 Query: 498 SLSMFIQMKMSPPPA---DKG--QAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 L+ I +K+ P D+ Q ++ MP++ + P GL IYW S ++ + Sbjct: 285 YLTQMINIKLMPQATNGNDQMASQMKMMNLMMPLMSFVICFTVPVGLGIYWICSALVRGI 344 Query: 552 QQAVIMK 558 QQ + + Sbjct: 345 QQFFVNR 351 Score = 52.3 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + + V + ++I++ T+ + + PL KQ + + +QP++ ++ K+ Sbjct: 31 WIYSGISNITGGRVESVVLSIVIITIIIYMCLLPLTIKQQKFSKLSQKMQPEMQAIQAKY 90 Query: 404 KQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K Q AM + LY+ + I+P+ C +L+Q+P+ FA+Y+V Sbjct: 91 KNKKDQASMMAMQEETQLLYQKYGISPMGSCVQMLIQMPILFALYRVFYN 140 >gi|185178696|ref|ZP_02964517.1| membrane protein OxaA [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|184209286|gb|EDU06329.1| membrane protein OxaA [Ureaplasma urealyticum serovar 5 str. ATCC 27817] Length = 383 Score = 77.0 bits (187), Expect = 8e-12, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 117/261 (44%), Gaps = 23/261 (8%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFY-FIAKPMFMLMSYFYNLVGNFGIAI------MLTTVF 370 + + P + D+G FY P+ ++ +F ++ + ++ + Sbjct: 99 LIYSGTGPWYPMSDFSFDYGPFYALFVWPIAQILLHFMYATRDWPAGLNAILGLIIILLI 158 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINP 426 ++++ ++ + + T + IQ KI E+ K+K + Q Q +LY+ HN+ P Sbjct: 159 IRVITMLISARATIQTERISEIQGKIAEINAKYKDAKDMQSRQKKQMETKELYQKHNVKP 218 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 LA +++ +P+F IY+V++I ++ +I DL+A + IF+ F + Sbjct: 219 LAPFESMIITLPIFLIIYRVVTILRPLKFIS-IFYIWDLSATPISEIFSNFTTSGWPYIF 277 Query: 487 FMHVGIWPIIMS--LSMFIQMKMSPPPA-----DKGQ----AMILNWMPVVFVFALSSFP 535 F+ + I I+S + + K + +K Q M N + +V ++ Sbjct: 278 FLLIIIPVQILSQKIPQLLAKKQNRSATTVGAKNKQQLKRVRMTQNIIAIVLAVVVAISA 337 Query: 536 AGLIIYWSWSNVISIVQQAVI 556 +G+ +YW ++ + +I+Q +I Sbjct: 338 SGIGLYWFFNAIFTILQSYII 358 >gi|227505680|ref|ZP_03935729.1| inner membrane protein translocase component YidC [Corynebacterium striatum ATCC 6940] gi|227197648|gb|EEI77696.1| inner membrane protein translocase component YidC [Corynebacterium striatum ATCC 6940] Length = 322 Score = 77.0 bits (187), Expect = 8e-12, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 98/262 (37%), Gaps = 27/262 (10%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ- 405 +L + F + + +AI+ + V+ PL S ++P+ + ++ + Sbjct: 17 HLLFASFLDESMAWLVAIVFLVLTVRSFIAPLNWLSVRSGRISALMRPEANAIKARLDAA 76 Query: 406 ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 + +L++ + NPL GC P+ + +P F +Y+V+ + + G + Sbjct: 77 TTVEEAVAALQDQKELHERYKYNPLVGCLPVFIIVPFFLGLYQVVLRASRIGQVDHVGLL 136 Query: 463 K--DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS---MFIQMK---MSPPPADK 514 D+ + + + + V I + + + M I ++ +K Sbjct: 137 TPGDVTSFRAALLNGVPITDFARDHRDLVVPILVLAIGFTILNMIITQYRSFLTLQFDEK 196 Query: 515 GQAMILNW-------MPVV--FVFALSSFPAGLIIYWSWSNVISIVQQ----AVIMKMHG 561 + + MP + P +I YW+W+ + ++VQ ++ + + Sbjct: 197 VPRRMFWFMFSMIILMPWILWSAAMSGPIPVAIIFYWAWTYLYTLVQTLVYEYIMYRRYP 256 Query: 562 AEIGLIDRLRSTFS--KNYNSQ 581 + R +F +N +++ Sbjct: 257 LTDAVTQLRRDSFRAWRNKDTK 278 >gi|291529192|emb|CBK94778.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Eubacterium rectale M104/1] Length = 438 Score = 77.0 bits (187), Expect = 8e-12, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 11/127 (8%) Query: 443 IYKVISISLEMRHAP--FWGWIKDLAAADP--TNIFTLFGILPFYLPGFMHVGIW-PIIM 497 + I ++E H + + L +D I + F P F+ + + P++ Sbjct: 221 FFDGIQSAVEKTHDALLHFNYFLGLNISDTPWYIIKSNFTDKPDKWLLFVILALLIPVLS 280 Query: 498 SLSMFIQMKMSPPPA---DKG--QAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 L+ I +K+ P D+ Q ++ MP++ + P GL IYW S ++ + Sbjct: 281 YLTQMINIKLMPQATNGNDQMASQMKMMNLMMPLMSFVICFTVPVGLGIYWICSALVRGI 340 Query: 552 QQAVIMK 558 QQ + + Sbjct: 341 QQFFVNR 347 Score = 52.3 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + + V + ++I++ T+ + + PL KQ + + +QP++ ++ K+ Sbjct: 27 WIYSGISNITGGRVESVVLSIVIITIIIYMCLLPLTIKQQKFSKLSQKMQPEMQAIQAKY 86 Query: 404 KQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K Q AM + LY+ + I+P+ C +L+Q+P+ FA+Y+V Sbjct: 87 KNKKDQASMMAMQEETQLLYQKYGISPMGSCVQMLIQMPILFALYRVFYN 136 >gi|225376872|ref|ZP_03754093.1| hypothetical protein ROSEINA2194_02514 [Roseburia inulinivorans DSM 16841] gi|225211193|gb|EEG93547.1| hypothetical protein ROSEINA2194_02514 [Roseburia inulinivorans DSM 16841] Length = 699 Score = 77.0 bits (187), Expect = 8e-12, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 105/298 (35%), Gaps = 63/298 (21%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 P+ +M Y LV N+G++I+L T+ K++ P++ ++ M IQP+I+E Sbjct: 6 NTVFGIPLGYVMWGCYQLVKNYGLSIILFTLVSKIVMLPVSIMVQKNSIRMIQIQPQINE 65 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL------- 451 ++ K + ++L+K + +P+ G P+LLQIP+ + VI + Sbjct: 66 IKYKHAGDKD-RIADEQMELFKKAHYSPMLGMVPMLLQIPLVLGLINVIYNPMQHLMHIK 124 Query: 452 ------------------EMRHAPFWGWIKDLAAADPTNIF------------------- 474 ++ + L D + F Sbjct: 125 TSVCDQIVAATCSLMGVDQLGSGAQLQAMAALQNPDNLSFFQNALTGTGIDIEAIAAQAA 184 Query: 475 ---TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN---------- 521 T F L + + V W +++ L + + + QA +L Sbjct: 185 TINTHFLGLDLSVVPHITVLAWILLIPLFSCLSTVLLCACQN--QANVLQKEQGALGQWG 242 Query: 522 --WMPVVF-VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 V F + P G+ +YW +SN+ S ++ ++ + + + Sbjct: 243 VTIFTVAFSTYFTFLVPGGVGLYWIFSNLFSTALIYILNAVYNPKKYIDYEALEESKR 300 >gi|268319894|ref|YP_003293550.1| membrane protein [Lactobacillus johnsonii FI9785] gi|262398269|emb|CAX67283.1| membrane protein [Lactobacillus johnsonii FI9785] Length = 327 Score = 77.0 bits (187), Expect = 8e-12, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 91/245 (37%), Gaps = 30/245 (12%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + F + + + + + G AI++ T V+L+ PL + Sbjct: 40 YAWIFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 392 IQPKIDELREKFKQ---------SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 K+ + ++ + + +++YK +N++ + GC P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKENNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S E+ + F+G + + I + + Sbjct: 160 MGIYQAVAYSKELAASSFFG-------------------ISLGQRSIILTVIATLFYVIQ 200 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ M P K M L P + F S P L +Y+ +I+I+QQ + + Sbjct: 201 GYLSMIGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQLITTFVI 260 Query: 561 GAEIG 565 ++ Sbjct: 261 MPKVK 265 >gi|218283269|ref|ZP_03489324.1| hypothetical protein EUBIFOR_01913 [Eubacterium biforme DSM 3989] gi|218215959|gb|EEC89497.1| hypothetical protein EUBIFOR_01913 [Eubacterium biforme DSM 3989] Length = 330 Score = 77.0 bits (187), Expect = 8e-12, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 94/256 (36%), Gaps = 30/256 (11%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F+ + GWF + + + + G+ I+LTT+ +++L F +K +ST M Sbjct: 83 FKESMSKGWFEGLIVWPIAQIINLISSKTDAGVGIILTTLLIQMLVFVFTRKSQMSTQRM 142 Query: 390 KNI----QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + I Q ++ ++K + + + M LY+ ++I+P +Q+P+ +Y Sbjct: 143 QEISPEIQKIQNKYKDKTDERSKMQMAQEMQNLYQKYDIHPFGSMLITFIQLPIMMGMYY 202 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 S+ + F G L G + + I +SM + Sbjct: 203 ATMRSVSVVSGSFMGI--------SLAGTPLDGFKALDIAYIAIYVLMVIFYIVSMKLPQ 254 Query: 506 KMS------------------PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + P M + +M + S+P + YW S+V Sbjct: 255 WLKKWQDKKDNVKVKKYAQEETNPMANSMNMSMYFMTAMICIMYISWPMAMSFYWLVSSV 314 Query: 548 ISIVQQAVIMKMHGAE 563 I + Q ++ ++ + Sbjct: 315 IRVCQSLILHQVMNKK 330 >gi|269114775|ref|YP_003302538.1| hypothetical protein MHO_0010 [Mycoplasma hominis] gi|268322400|emb|CAX37135.1| Hypothetical protein MHO_0010 [Mycoplasma hominis ATCC 23114] gi|291163429|gb|ADD80741.1| putative inner membrane protein translocase component YidC [Mycoplasma hominis ATCC 23114] Length = 664 Score = 77.0 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 64/419 (15%), Positives = 146/419 (34%), Gaps = 31/419 (7%) Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV 230 I L + + + +T+ + + + I + + + Q +S Sbjct: 255 EIVLRDIFQILVSNTLQKWASLKTFKDDKVNIFKEALKLNGSENANQIIEKWNQFIRSYE 314 Query: 231 EQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFS 290 ++ + ++ + + ++ +DG Y+ Sbjct: 315 QKSKNKTLLANEDEGRKLLQLFTFVKSVFQQYL---SNVNYVKLPSKTNDGSFVYRKSSL 371 Query: 291 ANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML- 349 + + + T T F + I Y++ A F + + F+ + L Sbjct: 372 SPA-SNYNSEYWTNTIFNNSAILSQKPISTYKEYWAQGPFYGIFVQPIYLFMDSIIKGLG 430 Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + ++ + I++ V + F L + + N K + + K + Q Sbjct: 431 TTGWSIILALIVVIIIVRLVVFGVSFKSLFSQAKMEEFNQKKAKIESKYAAYKGDRQMMQ 490 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 Q + +LYK I+P + WP + +P+ +++VI+ S E++ A ++ L+A Sbjct: 491 RKQAEISELYKKEKISPWSQIWPQFIALPILIVVFRVINTSPEIKQATWYS--IQLSAN- 547 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS------------PPPADKGQA 517 ++ +F F + + + + +LS ++ ++ A K Q Sbjct: 548 --SLNRVFSNKEFIYLPIILISVG--MQALSQYMPKILNWKKKKSLRVDAYQKAAMKKQN 603 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-------MKMHGAEIGLIDR 569 + N + +VF+ + F AGL IYW I I+Q + E L + Sbjct: 604 RMSNIISLVFIIFGAFFSAGLQIYWIVGAFILILQHIFVHYFQRTKFFKQKVEPKLTAK 662 >gi|238810221|dbj|BAH70011.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 663 Score = 77.0 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 98/249 (39%), Gaps = 36/249 (14%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P F + + + + M ++ + IA+++T + + + Q Sbjct: 413 PFFGLFVHPIAWLTGSMRENMPSLAGWSTIFVIIIAVVITRLLALAITWKSQVNQSKQED 472 Query: 388 NMKNIQPKIDELRE-KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 + + K + Q+ + LYK +NINPL I++ P+F A+++V Sbjct: 473 IKAKKAKIDAKYADFKGNKQMKIRHQQEIAALYKKNNINPLDAFLNIIISFPIFIAMWRV 532 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM- 505 I EM+ + G D AA T+ LF + ++GI + +++ F Sbjct: 533 IQSIPEMKSTHWLG--MDFAA---TSWKRLF------AGEWAYLGILVVALAV-QFFSQF 580 Query: 506 ------------------KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + + ++K Q +I+ +VF+F F G+ +YW +S + Sbjct: 581 TPRLLNRKKFKERTTIEEEKALKKSNKTQNIIM----IVFLFITLMFSCGVQVYWIFSGL 636 Query: 548 ISIVQQAVI 556 +I+Q I Sbjct: 637 WNIIQTISI 645 >gi|331086951|ref|ZP_08336027.1| hypothetical protein HMPREF0987_02330 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330409612|gb|EGG89051.1| hypothetical protein HMPREF0987_02330 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 421 Score = 77.0 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 10/115 (8%) Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PADKGQAMI 519 D + + + + + PI+ L+ +I +K+ P P + Sbjct: 233 DAPVNLMMDALKTGAILVAIVALLIPILSGLTQWINIKLMPQSPGMDDRENPMANSMKTM 292 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 MP+ VF + PAGL +YW +S + VQQ I K + + + + ++ Sbjct: 293 NMIMPLFSVFMCFTMPAGLGLYWIFSAICRSVQQVAINK-YLDRMDMDELVKRNM 346 Score = 49.2 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 4/97 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412 + N G+ I+L T+ + PL KQ + + P++ +++K+K Q +Q Sbjct: 38 IENIGLCIILFTIIIYTFMIPLTIKQQKFSKLSAVMNPELQAIQKKYKNKRDQESMLKMQ 97 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + M +Y + + + GC +++Q P+ A++KVI Sbjct: 98 EEMKMVYDKYGTSQMGGCLQLVIQFPILLALWKVIQN 134 >gi|160914809|ref|ZP_02077023.1| hypothetical protein EUBDOL_00816 [Eubacterium dolichum DSM 3991] gi|158433349|gb|EDP11638.1| hypothetical protein EUBDOL_00816 [Eubacterium dolichum DSM 3991] Length = 328 Score = 76.6 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 102/275 (37%), Gaps = 38/275 (13%) Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 K + F + GWF + + + + G+ I++TT+ Sbjct: 61 IQKKYKDMKPEDIIQIKKTTFGDAMSEGWFNGLIVWPIAQLINITSSFTDAGVGIIITTL 120 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF----KQSPPQVLQKAMIQLYKTHNIN 425 ++ + F + K V+T M++IQP++++++ K+ + + M LYK + IN Sbjct: 121 LIQFIIFLFSIKSQVATQKMQSIQPELNKIQAKYAGRNDDRSKMLQAQEMQALYKKNQIN 180 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 P +Q PV F +Y + + F+G DL + F Sbjct: 181 PFGTILVTFIQFPVIFGMYYATMRAYAVVSGSFYG--IDLTV---------TPLEGFTSQ 229 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSP---------------PPADKGQ------AMILNWMP 524 + HV I+ ++M + + KM A Q ++ +M Sbjct: 230 SWWHVVIF-LLMIVFQLVSFKMPQWLQEYRKKKNHVKEKKYAQPKQSGMAGSMNMMMYMS 288 Query: 525 V-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + ++P + YW +V+ ++Q ++ K Sbjct: 289 TGMIAIFAINWPLAMSFYWLVGSVVRVLQNILVHK 323 >gi|19554287|ref|NP_602289.1| putative inner membrane protein translocase component YidC [Corynebacterium glutamicum ATCC 13032] gi|62391944|ref|YP_227346.1| inner membrane protein translocase component YidC [Corynebacterium glutamicum ATCC 13032] gi|145297091|ref|YP_001139912.1| putative inner membrane protein translocase component YidC [Corynebacterium glutamicum R] gi|21325870|dbj|BAC00491.1| Preprotein translocase subunit YidC [Corynebacterium glutamicum ATCC 13032] gi|41223091|emb|CAF19036.1| Preprotein translocase subunit YidC [Corynebacterium glutamicum ATCC 13032] gi|140847011|dbj|BAF56010.1| hypothetical protein [Corynebacterium glutamicum R] Length = 317 Score = 76.6 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 107/287 (37%), Gaps = 66/287 (22%) Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ +++ + ++IM T V+++ S Sbjct: 1 MLNFIYWPISAILWFWHKAFSFVLSPDSGITWALSIMFLTFTVRMVLVKPMVNTMRSQRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+++ PK+ +REK+K Q + + +L K +NP+AGC P+L+QIPVF ++ V+ Sbjct: 61 MQDMAPKMQAIREKYKN-DQQKMMEETRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLR 119 Query: 449 I-------------SLE----------------------MRHAPFWGWIKDLAAADPTNI 473 ++E + AP +I A D + Sbjct: 120 SFNRTGSGVGQLEMTVEQNANTPNYIFGVDEVQSFLRADLFGAPLSSYITMPA--DAFDA 177 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP----PADKGQAM----------- 518 F + + I I+++ M ++ ++ A K QA Sbjct: 178 FLGLDVSRLNIALVAAPMILIIVVATHMNARLSVNRQEARKAAGKQQAASSDQMAMQMQM 237 Query: 519 ----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +L +MP +F + GL++Y +NV + QQ I Sbjct: 238 MNKMMLWFMPATILFTGFIWTIGLLVYMMSNNVWTFFQQRYIFAKMD 284 >gi|57234200|ref|YP_181756.1| inner membrane protein, 60 kDa [Dehalococcoides ethenogenes 195] gi|57224648|gb|AAW39705.1| inner membrane protein, 60 kDa [Dehalococcoides ethenogenes 195] Length = 277 Score = 76.6 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 8/195 (4%) Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 + ++L +PL +KQ +T M+ I ++ L++K Q L + ++LYK ++P Sbjct: 1 MVIRLALWPLNRKQLTATKKMQEITVHMEALKKKHGN-DRQKLAEEQMKLYKESGVSPTG 59 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL-AAADPTNIFTLFGILPFYLPGF 487 P+L+Q P++ A+Y+ I L + F L + L + Sbjct: 60 CLVPMLIQFPIWIALYQAIVRVLAVTPEDFMNLADHLYSWPVVYQTLPLSNHFLWMDLSL 119 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPA-----DKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 +++ +SM++Q KMS P A M+ MP +F F SFP+GL YW Sbjct: 120 PDF-ALAVLVGVSMYVQQKMSTPKAINQQQAAQGQMMSFMMPFMFFFFSLSFPSGLAFYW 178 Query: 543 SWSNVISIVQQAVIM 557 S ++ I+ Q I Sbjct: 179 FVSAIVGIIMQYFIT 193 >gi|171920597|ref|ZP_02931850.1| membrane protein OxaA [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|188024459|ref|ZP_02997108.1| membrane protein OxaA [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518432|ref|ZP_03003923.1| membrane protein OxaA [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524211|ref|ZP_03004271.1| membrane protein OxaA [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867408|ref|ZP_03079412.1| membrane protein OxaA [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273351|ref|ZP_03205887.1| membrane protein OxaA [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554229|ref|YP_002285057.1| putative inner membrane protein translocase component YidC [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550935|ref|ZP_03771884.1| membrane protein OxaA [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551006|ref|ZP_03771952.1| membrane protein OxaA [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903307|gb|EDT49596.1| membrane protein OxaA [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|188018755|gb|EDU56795.1| membrane protein OxaA [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998160|gb|EDU67257.1| membrane protein OxaA [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659986|gb|EDX53366.1| membrane protein OxaA [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660884|gb|EDX54137.1| membrane protein OxaA [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249871|gb|EDY74651.1| membrane protein OxaA [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541730|gb|ACI59959.1| membrane protein OxaA [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225378821|gb|EEH01186.1| membrane protein OxaA [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225380089|gb|EEH02451.1| membrane protein OxaA [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 383 Score = 76.6 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 117/261 (44%), Gaps = 23/261 (8%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFY-FIAKPMFMLMSYFYNLVGNFGIAI------MLTTVF 370 + + P + D+G FY P+ ++ +F ++ + ++ + Sbjct: 99 LIYSGTGPWYPMSDFSFDYGPFYALFVWPIAQILLHFMYATRDWPAGLNAILGLIIILLI 158 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINP 426 ++++ ++ + + T + IQ KI E+ K+K + Q Q +LY+ HN+ P Sbjct: 159 IRVITMLISARATIQTERISEIQGKIAEINAKYKDAKDMQSRQKKQMETKELYQKHNVKP 218 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 LA +++ +P+F IY+V++I ++ +I DL+A + IF+ F + Sbjct: 219 LAPFESMIITLPIFLIIYRVVTILRPLKFIS-IFYIWDLSATPISEIFSNFTTSGWPYIF 277 Query: 487 FMHVGIWPIIMS--LSMFIQMKMSPPPA-----DKGQ----AMILNWMPVVFVFALSSFP 535 F+ + I I+S + + K + +K Q M N + +V ++ Sbjct: 278 FLLIIIPVQILSQKIPQLLAKKRNRSATTVGAKNKQQLKRVRMTQNIIAIVLAVVVAISA 337 Query: 536 AGLIIYWSWSNVISIVQQAVI 556 +G+ +YW ++ + +I+Q +I Sbjct: 338 SGIGLYWFFNAIFTILQSYII 358 >gi|291526550|emb|CBK92137.1| Preprotein translocase subunit YidC [Eubacterium rectale DSM 17629] Length = 438 Score = 76.2 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 11/127 (8%) Query: 443 IYKVISISLEMRHAP--FWGWIKDLAAADP--TNIFTLFGILPFYLPGFMHVGIW-PIIM 497 + I ++E H + + L +D I + F P F+ + + P++ Sbjct: 221 FFDGIQSAVEKTHDALLHFNYFLGLNISDTPWYIIKSNFTDKPDKWLLFVILALLIPVLS 280 Query: 498 SLSMFIQMKMSPPPA---DKG--QAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 L+ + +K+ P D+ Q ++ MP + + P GL IYW S ++ + Sbjct: 281 YLTQMLNIKLMPQATNGNDQMASQMKMMNLMMPFMSFVICFTVPVGLGIYWICSALVRGI 340 Query: 552 QQAVIMK 558 QQ + + Sbjct: 341 QQFFVNR 347 Score = 52.3 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + + V + ++I++ T+ + + PL KQ + + +QP++ ++ K+ Sbjct: 27 WIYSGISNITGGRVESVVLSIVIITIIIYMCLLPLTIKQQKFSKLSQKMQPEMQAIQAKY 86 Query: 404 KQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K Q AM + LY+ + I+P+ C +L+Q+P+ FA+Y+V Sbjct: 87 KNKKDQASMMAMQEETQLLYQKYGISPMGSCVQMLIQMPILFALYRVFYN 136 >gi|237786652|ref|YP_002907357.1| putative inner membrane protein translocase component YidC [Corynebacterium kroppenstedtii DSM 44385] gi|237759564|gb|ACR18814.1| preprotein translocase subunit [Corynebacterium kroppenstedtii DSM 44385] Length = 324 Score = 76.2 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 102/288 (35%), Gaps = 56/288 (19%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 + + +A F + + + ++I+ +++ F Q S Sbjct: 1 MLNFIYYPVSWVMLAWYKFFGLFLNPDSGVTWALSIIFLVFTIRIFLFKPMANQMRSGRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QPK+ E+R K+K Q M +L K +NPLA C P L+Q+P+F ++Y V+ Sbjct: 61 MQELQPKMQEIRAKYKN-DQQTQAIEMRKLQKEMGVNPLASCLPALVQMPIFISLYHVLR 119 Query: 449 I-------------SLE-MRHAPFWGW----------IKDLAAADPTNI---------FT 475 ++E R+ P +G+ + A I F+ Sbjct: 120 SFNRTGTGHGELGMTVEQTRNTPNYGFGATEVQSFLDARLFGAPLSAYIRMPEKAFDAFS 179 Query: 476 LFGILPFYLPGFMHVGI-WPIIMSLSMFI----QMKMSPPPADKGQAM------------ 518 G + F + V I II +L+ ++ + Sbjct: 180 ASGSVDFTRTNILAVAIPLMIISALATHFNARNMVRRNKARQAADPKKNAQNPQMAMQAN 239 Query: 519 -----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +L P + + + GL+ Y +NV ++ QQ V+ Sbjct: 240 MMNNMMLWLFPAMILITGMFWQIGLLTYMLANNVWTLGQQIVLFNKMD 287 >gi|329768863|ref|ZP_08260291.1| hypothetical protein HMPREF0433_00055 [Gemella sanguinis M325] gi|328837226|gb|EGF86863.1| hypothetical protein HMPREF0433_00055 [Gemella sanguinis M325] Length = 295 Score = 76.2 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 99/265 (37%), Gaps = 47/265 (17%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----- 391 ++ KPM M +S + VG++G +I++ T+ V+++ P Y + + Sbjct: 28 TFYETFVKPMDMFLSKIHEYVGSWGWSIVIITLIVRIIILPFMLNNYKTQNKARRGQVLA 87 Query: 392 ------IQPKIDELREK-----------FKQSPPQVLQKAMIQLYKTHNINPLA--GCWP 432 +Q K REK ++ LQ+ + + K ++ NP++ GC P Sbjct: 88 RPELEVVQAKQKAAREKEARAISNEEKTQARAELMELQREQMAIMKKYDANPISVGGCLP 147 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+Q+P ++ ++ + A D T + GI ++ I Sbjct: 148 LLIQMPFLTGLFFTLTNP--LYSAGII---------DSTYL----GIFSLGTRSYVLPII 192 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMIL-------NWMPVVFVFALSSFPAGLIIYWSWS 545 ++ + + M ++PP GQ + PV+ + +Y+ Sbjct: 193 AFLVYAAQTKLTMAINPPLVQPGQEAMQGQMQMMQWLSPVMIAIFSFWVAGAVAVYYIVG 252 Query: 546 NVISIVQQAVIMKMHGA-EIGLIDR 569 + I Q + K++ + + Sbjct: 253 GLFLIFQTYLGYKIYPPYKPEKEKK 277 >gi|260905353|ref|ZP_05913675.1| preprotein translocase YidC subunit [Brevibacterium linens BL2] Length = 270 Score = 76.2 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 96/249 (38%), Gaps = 25/249 (10%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y++ + L+ + +AI++ T+ V+ + P+ Q + K + PKI EL Sbjct: 17 YWVVTWLTTLLEPLAG-TASAALAIVVLTIIVRAVLIPVGLSQVRAGITRKRLAPKITEL 75 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 + ++K++P ++Q+ M++LYK +P+AGC P+L Q+PV A+Y + S HA Sbjct: 76 QTRYKKTPE-LMQQKMMELYKEEKASPMAGCLPVLAQMPVLMAVYGIFIQSTIGGHANDL 134 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-----------------------PII 496 L L + G+ P+ Sbjct: 135 LNHSLLGVPLNAGFVGLLTGGNLSVVSAAVFGVIVIIIAVVAALSRHLLTPDMPQTPPVR 194 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 S S + P G +L++MP + P +Y + ++ ++ V+ Sbjct: 195 ASGSQNSTTEGPAMPDLSGVTRVLSFMPFMTAVIALFVPLAATLYLMTTTAWTLTERLVL 254 Query: 557 MKMHGAEIG 565 ++ Sbjct: 255 NRVLKVHEQ 263 >gi|213400719|gb|ACJ47008.1| hypothetical protein [Wolbachia endosymbiont of Dirofilaria immitis] Length = 171 Score = 75.8 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 2/164 (1%) Query: 225 GDKSLVEQKYSDIEKSSISNFHES-NSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282 D L E Y DI K + S +W G +DKYW + IP K + K+ + + Sbjct: 8 FDNKLEEWTYKDIAKKHLIKASTSGKNWFGFADKYWLTAIIPEKPDKINVSIKHTNINNI 67 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 ++QA F + +ILPG SI++ N+ FAGAK+ + +Y+ L IP F+ +D+G YF+ Sbjct: 68 DKFQADFVKSHKSILPGTSISSVNYFFAGAKKLNLLDYYKSALNIPLFDKAVDFGILYFV 127 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 KP+F+L+ YF ++ NFG+AI+ T+ +KLL PL+ + Y+S Sbjct: 128 TKPVFLLLEYFNFILKNFGLAILALTLVIKLLMLPLSNRSYISM 171 >gi|303319705|ref|XP_003069852.1| 60Kd inner membrane protein [Coccidioides posadasii C735 delta SOWgp] gi|240109538|gb|EER27707.1| 60Kd inner membrane protein [Coccidioides posadasii C735 delta SOWgp] Length = 495 Score = 75.8 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 98/254 (38%), Gaps = 40/254 (15%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + + + + L+ + G + VF+++ F +A ++ Sbjct: 123 KELGLDYGFGPSSLIETLLESIHIYAGLPWWGSTIAAAVFIRVALFKFNLNASDMSAKLR 182 Query: 391 NIQPKIDELREKFKQSPPQVLQKA------MIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +QP L+E+ ++ + + + + + + + +LQIP+ F + Sbjct: 183 RMQPITKPLQERMLKAVREGNNLEGLKLKQEMAMIREQHGVKMWKTFVPMLQIPLGFGFF 242 Query: 445 KVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +V+ + + + W+ D+ +DP I P++ S Sbjct: 243 RVLRGMSSLPVPGLLSEQFLWLNDITLSDPFF-------------------ILPLVTGGS 283 Query: 501 MFIQMKMS-PPPAD----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 M+ +K D +L +PV+ A+S +PA L +Y++ +++++++Q + Sbjct: 284 MYFAIKRGGETGMDFANSPLGKFMLYGLPVISTTAMSFWPAVLQLYFASTSLLALIQAYL 343 Query: 556 IM-----KMHGAEI 564 + K+ G E Sbjct: 344 VTSPGFRKLAGVEP 357 >gi|238883319|gb|EEQ46957.1| conserved hypothetical protein [Candida albicans WO-1] Length = 374 Score = 75.8 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 92/253 (36%), Gaps = 29/253 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + L+ + G I++ T+ V+L+ FPL + + M I+P+IDE Sbjct: 91 WGPTSLIERLLEVTHVYTGLPWWGTIVVATIAVRLVLFPLYVRASSNATKMSKIKPQIDE 150 Query: 399 L--REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIYKVISISLE 452 L + K + Q+ +L N +Q+P F A+ K+ + ++E Sbjct: 151 LLQQIKTGDTVDQMRAMEKRRLIMKENGVSTLATLFPAVQLPLAYGFFQALRKMANHNVE 210 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + W ++L DP + M+ M Sbjct: 211 GFSDQGYAWFQNLIEVDPYLGLQAISAAAIIAVVRVGGETGQHAMAAGM----------- 259 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ-----QAVIMKMHGAEIGLI 567 ++ +P+ +F F + +I+Y++ +++ S++Q + K+ G L Sbjct: 260 ----KKVMTVVPIASIFITKGFASAIILYFAVNSIFSLIQSSLFKSSWFRKIAGMPPKL- 314 Query: 568 DRLRSTFSKNYNS 580 L + N + Sbjct: 315 -SLAEMQANNPKA 326 >gi|241957285|ref|XP_002421362.1| cytochrome oxidase biogenesis protein, putative; inner membrane protein, mitochondrial precursor, putative; mitochondrial inner membrane translocase, putative; oxidase assembly protein, putative [Candida dubliniensis CD36] gi|223644706|emb|CAX40696.1| cytochrome oxidase biogenesis protein, putative [Candida dubliniensis CD36] Length = 376 Score = 75.8 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 93/253 (36%), Gaps = 29/253 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + L+ + G I++ T+ V+L+ FPL + + M I+P+IDE Sbjct: 93 WGPTSLIERLLEVTHVYTGLPWWGTIVVATIAVRLILFPLYVRASSNATKMSKIKPQIDE 152 Query: 399 L--REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIYKVISISLE 452 L + K + Q+ +L N +Q+P F A+ K+ + ++E Sbjct: 153 LLQQIKTGDTVEQMRAMEKRRLIMKENGVSTLATLFPAVQLPLAYGFFQALRKMANHNVE 212 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + W ++L DP + + M+ M Sbjct: 213 GFSDQGYAWFQNLIEVDPYLGLQVISAAAIIAVVRVGGETGQHAMAAGM----------- 261 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ-----QAVIMKMHGAEIGLI 567 ++ +P+ +F F + +I+Y++ +++ S++Q + K+ G L Sbjct: 262 ----KKVMTVVPIASIFITKGFASAIILYFAVNSIFSLIQSSLFKSSWFRKIAGMPPKL- 316 Query: 568 DRLRSTFSKNYNS 580 L + N + Sbjct: 317 -SLAEMQANNPKA 328 >gi|242372092|ref|ZP_04817666.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis M23864:W1] gi|242350204|gb|EES41805.1| Oxa1 family cytochrome oxidase biogenesis protein [Staphylococcus epidermidis M23864:W1] Length = 275 Score = 75.8 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 41/264 (15%) Query: 337 GWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN---- 391 ++ KPM L+ + L N+G+AI++ + V+ + PL Q + M+ Sbjct: 32 IFYNTFVKPMDGLLHFLGRLFHDNYGLAIIVIVLIVRFILLPLMLIQVKNMHMMREKTKV 91 Query: 392 IQPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIY 444 ++P++D +REK K + Q + +++ YK++ INP + GC P+++QIP+ +Y Sbjct: 92 VKPELDAIREKIKNADSQEERNAANQLLMKKYKSYGINPFKNMIGCLPVIIQIPILMGLY 151 Query: 445 KVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 + S + P + W +L + I II + F Sbjct: 152 MSLKYPTSDGITKYPHFLWF-NLTEPN---------------------LIMTIIAASMYF 189 Query: 503 IQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 IQ ++ K Q I+ P+ +A + + L +YWS S I+Q Sbjct: 190 IQPLVNSIHYPKDQRTTYYVIMVVSPIFITYASLTSASALGLYWSISAGFLIIQMHFAHS 249 Query: 559 MHGA-EIGLIDRLRSTFSKNYNSQ 581 +G L+ ++N + Sbjct: 250 YYGKLARQEAANLKKHLNQNQEKE 273 >gi|228474645|ref|ZP_04059376.1| putative membrane protein [Staphylococcus hominis SK119] gi|228271308|gb|EEK12676.1| putative membrane protein [Staphylococcus hominis SK119] Length = 280 Score = 75.8 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 92/241 (38%), Gaps = 40/241 (16%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK- 390 ++ KPM L+ + N+G+AI++ ++L+ PL Q + ++ Sbjct: 25 AQHGLFYTVFVKPMDDLLHVLGHAFNENYGLAIIVIVFILRLILMPLMCIQVKNIHVIRG 84 Query: 391 -------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVF 440 I ++++E + K +++ Y + INP L G +PIL+QIP+ Sbjct: 85 KTDVVKPEINKIQEKIKEAQSPEERRAANKLLMKKYNEYGINPFKNLIGTFPILIQIPIL 144 Query: 441 FAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 +Y I S + P + W +L D I II + Sbjct: 145 LGLYTSIKYPTSGGITQHPHFLWF-NLMHTD---------------------IIMTIIAA 182 Query: 499 LSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 + FIQ ++ K + ++ P+ +A + L +YW+ S I+Q Sbjct: 183 VMYFIQPLVNSIHYPKNERRSYYVMMVLSPLFITYASLHSASALSLYWAISATFLIIQMH 242 Query: 555 V 555 Sbjct: 243 F 243 >gi|300934353|ref|ZP_07149609.1| putative inner membrane protein translocase component YidC [Corynebacterium resistens DSM 45100] Length = 324 Score = 75.8 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 107/291 (36%), Gaps = 61/291 (20%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F G +F K ++ + + +AI+ +++ Q S+ Sbjct: 3 DFIYYPISGVLWFWHKLFSFVLDPSSGVT--WALAIVFLVFTIRIFLIKPMANQLRSSRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI- 447 M+ QPK+ EL+ K K + M +L K +NPLA C P L+Q+P+F ++ V+ Sbjct: 61 MQEFQPKMQELQRKHKNDRETLAI-EMRKLQKEMGVNPLASCIPALIQMPIFIGLFHVLR 119 Query: 448 -------------SISLEMRHAPFWGWIKD--------------LA---AADP--TNIFT 475 E R+ P + + D L+ + DP + F+ Sbjct: 120 SFNRTATSFGAPGMTVQETRNTPNYFFGVDEVQSFLDARLFGSPLSGYISMDPANYSAFS 179 Query: 476 LFGILPFYLPGFMHVGIWPIIMS--LSMFIQMKMSPPPADKGQAM--------------- 518 G + + + I P++++ + M +MS + K QA Sbjct: 180 PEGAGIDFSRMNIILIIVPLMLASAVMMHFTARMSIDRSKKRQAANPKKDADPRQQQMQM 239 Query: 519 --------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 +L MP +++ + GL IY +N ++ QQ ++ Sbjct: 240 QMDMMQRMMLWVMPALYLTGGFMWQVGLAIYMFVNNAWTVAQQKLLFAKMD 290 >gi|71980488|ref|NP_493356.2| hypothetical protein C01A2.3 [Caenorhabditis elegans] gi|63108013|emb|CAB02698.2| C. elegans protein C01A2.3, confirmed by transcript evidence [Caenorhabditis elegans] Length = 366 Score = 75.8 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 84/244 (34%), Gaps = 37/244 (15%) Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 E L W W+ + + L S +L + + I+ TV ++ L + Sbjct: 72 GASVLEELGLWTWWKPSSYFRWALESIHVHLDIPWWVTIVAATVTLRALLIGVPVMSQKL 131 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMI-------QLYKTHNINPLAGCWPILLQIP 438 A + +++E R++ ++ + Q ++ +I + Sbjct: 132 VAKQSMYRKEMNEFRDRIDEARKENNQLLQQQILLEQRDFLRSKDIRLGRQFMVMAANGA 191 Query: 439 VF----FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 VF FAI K++ ++ W DL A DP P Sbjct: 192 VFATQFFAIKKMVVVNYPGLSTGGTLWFTDLTATDPYY-------------------ALP 232 Query: 495 IIMSLSMFIQMKM------SPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNV 547 I + +M + K+ S + + +PVV S F GL +YW+ SN Sbjct: 233 FISAATMALVTKVGIEMGTSADQMPPIMRAFMTYGLPVVIFGVSSQFATGLCVYWTASNA 292 Query: 548 ISIV 551 +S++ Sbjct: 293 VSLI 296 >gi|238916077|ref|YP_002929594.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC 27750] gi|238871437|gb|ACR71147.1| preprotein translocase YidC subunit [Eubacterium eligens ATCC 27750] Length = 633 Score = 75.8 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 99/249 (39%), Gaps = 26/249 (10%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 ++ + +M++ Y L+ ++G+AI+L T+ K++ P++ ++ M +QP I+ Sbjct: 1 MEILSTALGYVMNFCYKLLHDYGLAIILFTLISKIVLLPVSIWVQKNSIKMVKMQPDINR 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + K + + +LYK NPLA P+++QI + + VI + A Sbjct: 61 ILIKHYGDKD-EIAEEQSKLYKKEKYNPLASLIPLIIQIILLLGVVAVIKDGINEGVANM 119 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQ 516 DL + I PII +S ++ Q Sbjct: 120 KFCGYDLT--------------WITTKQWGLSIITPIIAGVSAWLLCVAQNASNVLQAEQ 165 Query: 517 AMI----LNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQ----QAVIMKMHGAEIGLI 567 + + + V + ++ AG+ +YW+ SN+ +I+Q I + + + Sbjct: 166 SKLNKYGMMIFSVGLSLYLGCFVYAGVALYWTASNIFAILQLYLLNWAINPKNYVDYEAL 225 Query: 568 DRLRSTFSK 576 + + ++ Sbjct: 226 EETKKELAE 234 >gi|289549934|ref|YP_003470838.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] gi|315659439|ref|ZP_07912302.1| lipoprotein [Staphylococcus lugdunensis M23590] gi|289179466|gb|ADC86711.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] gi|315495558|gb|EFU83890.1| lipoprotein [Staphylococcus lugdunensis M23590] Length = 273 Score = 75.8 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 88/242 (36%), Gaps = 39/242 (16%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN------ 391 +FY KP+ L+ L ++GIAI+L + ++ + PL Q ++ Sbjct: 31 FFYVFVKPIDWLLHSIGQLFHSYGIAIILIVIIIRSILLPLMLNQMKQMHTLREKRAIVQ 90 Query: 392 --IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKV 446 I ++R+ + + ++ YK + I+P G PI +QIP+ + Sbjct: 91 DEISDIQTQMRQASTPEIRKEANQLLLAKYKEYGISPFKSILGSLPIFIQIPIILGLLAC 150 Query: 447 I--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S + P + W +L D ++ L FIQ Sbjct: 151 IKHPTSDALAQHPHFLWF-NLMHPDIW---------------------LALLAGLLYFIQ 188 Query: 505 MKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ KGQ ++ P+ ++A A + +YW S IVQ + + Sbjct: 189 PLVNAIHYPKGQRKTYYTMMVLSPLFIIYASLHSAAAISLYWVVSASFLIVQTHFGHRRY 248 Query: 561 GA 562 Sbjct: 249 KK 250 >gi|13358167|ref|NP_078441.1| putative inner membrane protein translocase component YidC [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762036|ref|YP_001752687.1| putative inner membrane protein translocase component YidC [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920376|ref|ZP_02690825.2| membrane protein OxaA [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508481|ref|ZP_02958012.1| membrane protein OxaA [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701708|ref|ZP_02971400.1| membrane protein OxaA [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|38503225|sp|Q9PPN7|OXAA_UREPA RecName: Full=Membrane protein oxaA gi|11356766|pir||F82871 conserved hypothetical membrane lipoprotein UU602 [imported] - Ureaplasma urealyticum gi|6899613|gb|AAF31016.1|AE002158_14 conserved hypothetical membrane lipoprotein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827613|gb|ACA32875.1| membrane protein OxaA [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902808|gb|EDT49097.1| membrane protein OxaA [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675901|gb|EDT87806.1| membrane protein OxaA [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700974|gb|EDU19256.1| membrane protein OxaA [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 383 Score = 75.8 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 117/261 (44%), Gaps = 23/261 (8%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFY-FIAKPMFMLMSYFYNLVGNFGIAI------MLTTVF 370 + + P + D+G FY P+ ++ +F ++ + ++ + Sbjct: 99 LIYSGTGPWYPMSDFSFDYGPFYALFVWPIAQILLHFMYATRDWPAGLNAILGLIIILLI 158 Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINP 426 ++++ ++ + + T + IQ KI E+ K+K + Q Q +LY+ HN+ P Sbjct: 159 IRVITMLISARATIQTERISEIQGKIAEINAKYKDAKDMQSRQKKQMETKELYQKHNVKP 218 Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 LA +++ +P+F IY+V++I ++ +I DL+A + IF+ F + Sbjct: 219 LAPFESMIITLPIFLIIYRVVTILRPLKFIS-IFYIWDLSATPISEIFSNFTTSGWPYIF 277 Query: 487 FMHVGIWPIIMS--LSMFIQMKMSPPPA-----DKGQ----AMILNWMPVVFVFALSSFP 535 F+ + I I+S + + K + +K Q M N + +V ++ Sbjct: 278 FLLIIIPVQILSQKIPQLLARKRNRNATTVGAKNKQQLKRVRMTQNIIAIVLAVVVAISA 337 Query: 536 AGLIIYWSWSNVISIVQQAVI 556 +G+ +YW ++ + +I+Q +I Sbjct: 338 SGIGLYWFFNAIFTILQSYII 358 >gi|68469228|ref|XP_721401.1| hypothetical protein CaO19.6565 [Candida albicans SC5314] gi|68470253|ref|XP_720888.1| hypothetical protein CaO19.13918 [Candida albicans SC5314] gi|77022678|ref|XP_888783.1| hypothetical protein CaO19_6565 [Candida albicans SC5314] gi|46442780|gb|EAL02067.1| hypothetical protein CaO19.13918 [Candida albicans SC5314] gi|46443318|gb|EAL02601.1| hypothetical protein CaO19.6565 [Candida albicans SC5314] gi|76573596|dbj|BAE44680.1| hypothetical protein [Candida albicans] Length = 374 Score = 75.8 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 92/253 (36%), Gaps = 29/253 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + L+ + G I++ T+ V+L+ FPL + + M I+P+IDE Sbjct: 91 WGPTSLIERLLEVTHVYTGLPWWGTIVVATIAVRLVLFPLYVRASSNATKMSKIKPQIDE 150 Query: 399 L--REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP----VFFAIYKVISISLE 452 L + K + Q+ +L N +Q+P F A+ K+ + ++E Sbjct: 151 LLQQIKTGDTVDQMRAMEKRRLIMKENGVSTLATLFPAVQLPLAYGFFQALRKMANHNVE 210 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + W ++L DP + M+ M Sbjct: 211 GFSDQGYAWFQNLIEVDPYLGLQAISAAAIIAVVRVGGETGQHAMAAGM----------- 259 Query: 513 DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ-----QAVIMKMHGAEIGLI 567 ++ +P+ +F F + +I+Y++ +++ S++Q + K+ G L Sbjct: 260 ----KKVMTVVPIASIFITKGFASAIILYFAVNSIFSLIQSSLFKSSWFRKIAGMPPKL- 314 Query: 568 DRLRSTFSKNYNS 580 L + N + Sbjct: 315 -SLAEMQANNPKA 326 >gi|290982689|ref|XP_002674062.1| predicted protein [Naegleria gruberi] gi|284087650|gb|EFC41318.1| predicted protein [Naegleria gruberi] Length = 424 Score = 75.8 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 81/259 (31%), Gaps = 28/259 (10%) Query: 316 PTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLF 375 + + + A EM + +K + + ++ + +I ++L+ Sbjct: 127 DDVAGQQLEAAENMSEMFSSITDYLNPSKLLEACIIALHDAGLPWWGSIATVGFALRLVM 186 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA-----MIQLYKTHNINPLAGC 430 PL S+ M + + L++ ++ ++ K Sbjct: 187 SPLNVMSMRSSTIMSKLGTSLTNLKKDQVDPKKSPTEREHARKTYEEITKKEGFKMSHMF 246 Query: 431 WPILLQIPVFFAIYKVISIS---LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 LLQ P+F A + I+ +E W DL DPT + + F Sbjct: 247 L-PLLQSPIFIAFFFCINRMVREIEGLQWGGMLWFNDLTVKDPTYVLPIISASCFMAVFL 305 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI---LNWMPVVFVFALSSFPAGLIIYWSW 544 ++ + + + Q++I + V PA L +YW Sbjct: 306 VNTF---------------LRSSGSGRIQSLIAVGMGVFSFALVPFTGRLPAALFMYWIP 350 Query: 545 SNVISIVQQAVIMKMHGAE 563 SN I+ ++M + Sbjct: 351 SNFFQILF-YLLMSRKPVK 368 >gi|227834359|ref|YP_002836066.1| preprotein translocase YidC subunit [Corynebacterium aurimucosum ATCC 700975] gi|262183091|ref|ZP_06042512.1| putative inner membrane protein translocase component YidC [Corynebacterium aurimucosum ATCC 700975] gi|227455375|gb|ACP34128.1| preprotein translocase YidC subunit [Corynebacterium aurimucosum ATCC 700975] Length = 329 Score = 75.8 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 106/311 (34%), Gaps = 68/311 (21%) Query: 338 WFYFIAKPMFMLMSYFYN---------LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ +++ G + IAI+L T +K + Q S+ Sbjct: 1 MLNFIYWPISAVLWFWHWLLSFVLDSAWGGTWIIAIVLLTWTLKAIMVKPTITQLRSSRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ IQP+I ELR K+ + + M ++YK + P+AGC P+ QIP+F ++ V+ Sbjct: 61 MQEIQPQIQELRTKYANDQTKA-AQEMQRIYKESGVRPVAGCLPMFAQIPMFIGLFHVLR 119 Query: 449 I------------------SLEMRHAPFWGWIKDLAAADPTNIFTLFGIL---------- 480 E +A +I + +FG+ Sbjct: 120 SFDRTVAVAGGIGHPAGEAMSEEMNASIANYIFEPELVKQFVDAKIFGVPLVANLRLNSG 179 Query: 481 ------PFYLPGFMHVGIWPIIMSLSMFIQMKMS----------PPPADKGQAM------ 518 + + + I+++ +M+ A Sbjct: 180 LEIVKETTTMQAAVIIVPLIAIIAVLTHFNARMTLNRQEARRAAGKTATPQGQNAEMMQQ 239 Query: 519 --------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 +L +MP + VF+ +P GL+ Y + V + Q ++ E Sbjct: 240 QMAMMNKMMLWFMPAMLVFSGFIWPIGLLFYMLANTVWTFFQTRIVYAKMDREEEEEAAA 299 Query: 571 RSTFSKNYNSQ 581 ++ + + Sbjct: 300 KAELKRTSAPK 310 >gi|311740346|ref|ZP_07714175.1| membrane protein OxaA [Corynebacterium pseudogenitalium ATCC 33035] gi|311304530|gb|EFQ80604.1| membrane protein OxaA [Corynebacterium pseudogenitalium ATCC 33035] Length = 314 Score = 75.4 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 112/278 (40%), Gaps = 35/278 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + P+ +M +++ L+ + + I+I+L + V+ + PL S Sbjct: 1 MYEVFMYPVSGIMKFWHWLISSFVGESTAWLISIILLVITVRGVVVPLNWISVRSARIGA 60 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKV 446 I+P+ + ++++ + ++Q L K++N NP AGC P L+ IP F +Y+V Sbjct: 61 LIRPENNRIKKQMNNATTTEEMAELMQEEKNLMKSYNYNPAAGCVPPLIMIPAFIGLYQV 120 Query: 447 I--SISLEMRHAPFWGWIK--DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM- 501 + ++E R + G + D++A T + G + I ++ +M Sbjct: 121 LLRMSNIE-RGSTTVGMLNASDVSAFRETTFYGAPLTDFAREHGDLINPILIAAIAFTMA 179 Query: 502 --FIQMKMSPPPADKGQA------MILNWMPVVFVFALSSF------PAGLIIYWSWSNV 547 I + S Q +++ ++ +V F L P +I+YW + + Sbjct: 180 NSVISLVRSFRTTQFDQKVNRRVFILMGFLLLVIPFFLWHLAQTGPIPVAIILYWGCAYL 239 Query: 548 ISIVQQA----VIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 ++Q A ++ + + + R + + + Sbjct: 240 FMLIQTAIFEIILHRDYPLTEDVHAMRRESIRRWRKRE 277 >gi|289549616|ref|YP_003470520.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] gi|289179148|gb|ADC86393.1| OxaI/YidC membrane insertion protein [Staphylococcus lugdunensis HKU09-01] Length = 258 Score = 75.4 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 84/212 (39%), Gaps = 39/212 (18%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMKNIQPKIDELREKFKQSPPQVLQK 413 N+G+AI++ V+L+ PL MK +QPKI+ +++K K + Q L+ Sbjct: 52 HNYGLAIVIIVCLVRLILMPLMLHNQKQMAITSMKMKELQPKIEPIQQKMKAAATQQLKN 111 Query: 414 AMIQLYKTHNI----NP---LAGCWPILLQIPVFFAIYKVI--SISLEMRHAPFWGWIKD 464 Q + NP + GC P+L+QIP+ F +Y + S + P + W Sbjct: 112 EAYQELQQLYQQHQLNPLTTMFGCLPMLIQIPILFGLYATLKWPTSGGILSYPTFMWFH- 170 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM- 523 L + D I F+Q +S K Q M+ M Sbjct: 171 LTSPDSMIAM---------------------IAGFMYFVQSWLSARQMPKEQRMMGYVMM 209 Query: 524 ---PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P+ ++ P+ L +YW + + I+Q Sbjct: 210 IVSPLFILYIAFQSPSALALYWFVNAALLILQ 241 >gi|314935647|ref|ZP_07842999.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80] gi|313656212|gb|EFS19952.1| putative lipoprotein [Staphylococcus hominis subsp. hominis C80] Length = 280 Score = 75.4 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 94/244 (38%), Gaps = 40/244 (16%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 ++ ++ KPM L+ + N+G+AI++ ++L+ PL Q + Sbjct: 22 YKEAQHGLFYTVFVKPMDDLLHVLGHAFNENYGLAIIVIVFILRLILMPLMCIQVKNIHV 81 Query: 389 MK--------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQI 437 ++ I ++++E + K +++ Y + INP L G +PIL+QI Sbjct: 82 IRGKTEVVKPEINKIQEKIKEAQSPEERRAANKLLMKKYNEYGINPFKNLIGTFPILIQI 141 Query: 438 PVFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 P+ +Y I S + P + W +L D I I Sbjct: 142 PILLGLYTSIKYPTSGGITQHPHFLWF-NLMHTD---------------------IIMTI 179 Query: 496 IMSLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 I ++ FIQ ++ K + ++ P+ +A + L +YW+ S I+ Sbjct: 180 IAAVMYFIQPLVNSIHYPKNERRSYYVMMVLSPLFITYASLHSASALSLYWAISATFLII 239 Query: 552 QQAV 555 Q Sbjct: 240 QMHF 243 >gi|331083516|ref|ZP_08332628.1| hypothetical protein HMPREF0992_01552 [Lachnospiraceae bacterium 6_1_63FAA] gi|330404209|gb|EGG83757.1| hypothetical protein HMPREF0992_01552 [Lachnospiraceae bacterium 6_1_63FAA] Length = 424 Score = 75.4 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 12/129 (9%) Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F V++ + + H L AD G + + + P++ Sbjct: 203 FQGFADVLNQTADKLH--PMQNFLGLNIADNPWALIQSGWSTQHYLLILAAVLIPVLAWG 260 Query: 500 SMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 + + MK+ +P + + +MP++ F +FP G+ IYW VI Sbjct: 261 TQVLNMKLVQTASNTSNGTPSQMEATMKTMNMFMPLMTAFICFTFPVGIGIYWIIGAVIR 320 Query: 550 IVQQAVIMK 558 VQQ +I + Sbjct: 321 SVQQIIINR 329 Score = 59.2 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 78/148 (52%), Gaps = 10/148 (6%) Query: 336 WGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 ++A+ + LM+ Y++ V N G+ I++ T+ + PL KQ + P Sbjct: 10 MPIVNWVAEVLGWLMNGIYSIGVHNLGLCIIIFTLVIYAFMTPLQIKQQKFAKMNAVMAP 69 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++ +++K++ Q +Q+ + +Y+ + ++P C +L+Q+P+FFA+Y+VI Sbjct: 70 ELQNIQKKYRGKKDQNSQLKMQEETMGVYEKYGVSPTGSCLQMLIQMPIFFALYQVI--- 126 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFG 478 ++ + G IKD+ A+ ++I + G Sbjct: 127 --IKIPGYIGGIKDVFASAVSHITDVSG 152 >gi|313904721|ref|ZP_07838095.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium cellulosolvens 6] gi|313470514|gb|EFR65842.1| membrane protein insertase, YidC/Oxa1 family [Eubacterium cellulosolvens 6] Length = 420 Score = 75.4 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 46/120 (38%), Gaps = 12/120 (10%) Query: 472 NIFTLFGILPFYLPGFMHVGI-WPIIMSLSMFIQMKMSPPPADKG---------QAMIL- 520 G + + VGI PII + +I MK+ P A Q + Sbjct: 239 FHGIFSGTANSAMIFALIVGIAIPIIAWFTNWINMKLMPQQAQSSDGSDNSVAKQMNTMN 298 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 MPV SF G+ IYW V+ IVQQ +I + G +I + +R KN Sbjct: 299 TIMPVFSAVLCISFNMGIGIYWIVGAVVRIVQQVIINRHIG-QIDTDEMIRKAEEKNRKK 357 Score = 56.5 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 61/112 (54%), Gaps = 6/112 (5%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 ++ +++++ N G+ I T+ + ++ P+ KQ S+ + IQP++ +++ Sbjct: 22 WLMNGIYVVLDTVGW--ANTGLCIAFFTIIIYIVLTPIQIKQQKSSKVIAVIQPELQKIQ 79 Query: 401 EKFKQSPPQVLQK----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 +K++ Q Q+ + LY + ++P C P+L+Q+P+ FA+Y+VI Sbjct: 80 KKYQGKKDQASQQKMSEETMALYAKYGVSPTGSCLPMLIQLPIMFALYQVIL 131 >gi|242003776|ref|XP_002422855.1| mitochondrial inner membrane protein OXA1L, putative [Pediculus humanus corporis] gi|212505737|gb|EEB10117.1| mitochondrial inner membrane protein OXA1L, putative [Pediculus humanus corporis] Length = 201 Score = 75.4 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 31/181 (17%) Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 + ++ Q KI+E + + + KT I L P Q P+F Sbjct: 1 MQNNLPQIQGYQNKINEAKLTGNYYEVAHHVNELQEFMKTKQIGALGFFIPAFAQAPIFL 60 Query: 442 AIYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 +++ + +E W DL DP + P+++ Sbjct: 61 SMFWGLRAMTNLPVESMKTGGLFWFTDLTVPDPYY-------------------VLPVMV 101 Query: 498 SLSMFIQMKMSPPPADKG---QAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 S + F M+ + + Q + + ++PV+ +FPA L YW+ SN+ S+ Sbjct: 102 SCTFFAIME-TGAEGNSMGTIQQIWLRYLFRFLPVILFPITMNFPAALQCYWTMSNLTSL 160 Query: 551 V 551 Sbjct: 161 G 161 >gi|315049391|ref|XP_003174070.1| inner membrane protein OXA1 [Arthroderma gypseum CBS 118893] gi|311342037|gb|EFR01240.1| inner membrane protein OXA1 [Arthroderma gypseum CBS 118893] Length = 485 Score = 75.0 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 40/326 (12%), Positives = 105/326 (32%), Gaps = 49/326 (15%) Query: 261 SVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHH 320 S I ++ ++ S G + +F++ T + T + + + Sbjct: 41 SSLIGGNGSALNAIRTARSSGAIKISPRFASTAATPSAIDTATGESTTNTVPETITSGSD 100 Query: 321 YEKDLAIPRFEMLI-----------DWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTT 368 ++ ++ + + + + + L+ + G + Sbjct: 101 ALSGGSLTDIDLSLIPEKIGYLKELGLDYGWGPSSMVQFLLETLHITGGLPWWGATVAAA 160 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKT 421 V +++ F + + I+P +RE+ + ++ + L + Sbjct: 161 VLIRVALFKSILSASEVSGKLHAIKPLATPIRERMLHCARENDNVGALKAKQELSALNEQ 220 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLF 477 H + P L+Q+P+ F ++V+ + + W+ + +DP Sbjct: 221 HGVKPWKAFV-PLIQVPLGFGCFRVLRGMSALPVPGLDSESVLWLHSVTMSDPFY----- 274 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMK------MSPPPADKGQAMILNWMPVVFVFAL 531 P+ S MF+ +K S +L +P + + + Sbjct: 275 --------------ALPVATSAMMFLALKRGGDAGTSNLTNSPLGKAMLYGLPAITMATM 320 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIM 557 S +P L +Y+ + +S+ Q ++ Sbjct: 321 SFWPGILQLYFLTTGFLSMCQAYLMT 346 >gi|227489035|ref|ZP_03919351.1| hypothetical protein HMPREF0294_2185 [Corynebacterium glucuronolyticum ATCC 51867] gi|227090980|gb|EEI26292.1| hypothetical protein HMPREF0294_2185 [Corynebacterium glucuronolyticum ATCC 51867] Length = 397 Score = 75.0 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 96/269 (35%), Gaps = 43/269 (15%) Query: 347 FMLMSYFYNLVGNFGIAI--MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + + N + + + V+ L PLA K YVS ++P + L+E ++ Sbjct: 16 HTFLHGGLGVNENIAWILSFVGLIITVRSLIAPLAWKMYVSARRTAIMRPHMASLKEDYR 75 Query: 405 QSPPQVLQKA----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKV---ISISLEMRHAP 457 + Q QL H +NP+AGC P+L+Q PV +Y++ I+ Sbjct: 76 GKLDKESQAELSRKSQQLMDEHEVNPMAGCAPMLIQFPVILGLYRMVLRIARPEGGLGTS 135 Query: 458 FWGWIKDLAAADPTNIFT--LFGILPFYLPGF--------------MHVGIWPIIMSLSM 501 + + L++AD + FG+ + I PI+++ + Sbjct: 136 PYPPVGFLSSADVGSFLETRAFGLPIAAYASMPEAQLNELGTTGDHLVHTITPIVIAATC 195 Query: 502 FIQMKMSPPPADKGQAM------------ILNWM----PVVFVFALSS--FPAGLIIYWS 543 F+ + M + M + + P + + + P +I YW Sbjct: 196 FMTLNMILSTIRSFETMDWRSGFAVNVSFSMVFFAIYTPFMILTLAFNGPIPVAIIFYWF 255 Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 +N ++ Q V+ M L + Sbjct: 256 VNNFWTMSQLIVLWTMLTVRHPLTPEFKE 284 >gi|320034138|gb|EFW16083.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 495 Score = 75.0 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 98/254 (38%), Gaps = 40/254 (15%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + + + + L+ + G + VF+++ F +A ++ Sbjct: 123 KELGLDYGFGPSSLIETLLESIHIYAGLPWWGSTIAAAVFIRVALFKFNLNASDMSAKLR 182 Query: 391 NIQPKIDELREKFKQSPPQVLQKA------MIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +QP L+E+ ++ + + + + + + + +LQIP+ F + Sbjct: 183 RMQPITKPLQERMLKAVREGNNLEGLKLKQEMAMIREQHGVKMWKTFVPMLQIPLGFGFF 242 Query: 445 KVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +V+ + + + W+ D+ +DP I P++ S Sbjct: 243 RVLRGMSSLPVPGLLSEQFLWLNDITLSDPFF-------------------ILPLVTGGS 283 Query: 501 MFIQMKMS-PPPAD----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 M+ +K D +L +PV+ A+S +PA L +Y++ +++++++Q + Sbjct: 284 MYFAIKRGGETGMDFANSPLGKFMLYGLPVISTTAMSFWPAVLQLYFASTSLLALIQAYL 343 Query: 556 IM-----KMHGAEI 564 + K+ G E Sbjct: 344 VTSPGFRKLAGVEP 357 >gi|212704367|ref|ZP_03312495.1| hypothetical protein DESPIG_02422 [Desulfovibrio piger ATCC 29098] gi|212672226|gb|EEB32709.1| hypothetical protein DESPIG_02422 [Desulfovibrio piger ATCC 29098] Length = 125 Score = 75.0 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 8/124 (6%) Query: 1 MERNWNYFVAIALSVIIVYAWQN------FYVYPRIEEMNNERKNIQTVKQPNQVDNSYA 54 M+ N +AI L +++V W + V P E+ Q Q + Sbjct: 1 MQDGKNLIMAIVLCLLVVVGWSYLADYMGWVVKPDPAEIAKMEAAQAEQAQKAQAEAEAK 60 Query: 55 AVLIDDRAQALSMSP--RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 + A + +P V + P ++ G L+ Y + +SP + ++ Sbjct: 61 QKAQAEPLPAFTPAPGVDVTVDAPLYKAVLHSGGGVLRSFELKKYTTGLDEDSPRINMVD 120 Query: 113 PSNT 116 P Sbjct: 121 PQTA 124 >gi|119183245|ref|XP_001242683.1| hypothetical protein CIMG_06579 [Coccidioides immitis RS] Length = 495 Score = 75.0 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 98/254 (38%), Gaps = 40/254 (15%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + + + + L+ + G + VF+++ F +A ++ Sbjct: 123 KELGLDYGFGPSSLIETLLESIHIYAGLPWWGSTIAAAVFIRVALFKFNLNASDMSAKLR 182 Query: 391 NIQPKIDELREKFKQSPPQVLQKA------MIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +QP L+E+ ++ + + + + + + + +LQIP+ F + Sbjct: 183 RMQPITKPLQERMLKAVREGNNLEGLKLKQEMAMIREQHGVKMWKTFVPMLQIPLGFGFF 242 Query: 445 KVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +V+ + + + W+ D+ +DP I P++ S Sbjct: 243 RVLRGMSSLPVPGLLSEQFLWLNDITLSDPFF-------------------ILPLVTGGS 283 Query: 501 MFIQMKMS-PPPAD----KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 M+ +K D +L +PV+ A+S +PA L +Y++ +++++++Q + Sbjct: 284 MYFAIKRGGETGMDFANSPLGKFMLYGLPVISTTAMSFWPAVLQLYFASTSLLALIQAYL 343 Query: 556 IM-----KMHGAEI 564 + K+ G E Sbjct: 344 VTSPGFRKLAGVEP 357 >gi|224437585|ref|ZP_03658541.1| inner membrane protein [Helicobacter cinaedi CCUG 18818] gi|313144038|ref|ZP_07806231.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129069|gb|EFR46686.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 317 Score = 75.0 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 101/232 (43%), Gaps = 19/232 (8%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 ++ + + + + + + + + N+G++I+L ++ ++L L A+ + Sbjct: 4 ILYYIFIFPVEQVLEWALFTLFKATKNYGVSIILLSLIMQLFMLKLTFYFDKKAASFGAL 63 Query: 393 QPK-IDELREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIYKVIS 448 + + +++E + LQ + LYK + +P L G + LQIP F A+ + Sbjct: 64 KAQCDSKIKEFKRVFKGAELQSYIRTLYKQKHFHPIFALFGLGGLALQIPFFIAMIH-LV 122 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + E + + WI DL+ D +F L + I P++M+ I + S Sbjct: 123 ENAEYLQSVRFLWIDDLSKPDSIMLFGL------------SIHILPLLMTAFTLINVFYS 170 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 D L ++F+ L S P+ L++YW+ + S++++ K H Sbjct: 171 SKELDARVQGSLIA--LLFLVLLYSMPSALVLYWTCNMFFSLLKEIFKHKKH 220 >gi|302506228|ref|XP_003015071.1| mitochondrial export translocase Oxa1, putative [Arthroderma benhamiae CBS 112371] gi|291178642|gb|EFE34431.1| mitochondrial export translocase Oxa1, putative [Arthroderma benhamiae CBS 112371] Length = 484 Score = 75.0 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 90/243 (37%), Gaps = 36/243 (14%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + + + + L+ + G + T V ++++ F +A +K Sbjct: 123 KELGLDYGWGPSSMVQFLLETLHITGGLPWWTATVATAVLIRVVLFNSIVSSAEVSAKLK 182 Query: 391 NIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 IQP+ +RE+ + + + L + H I P LLQIP+ F Sbjct: 183 AIQPRTTPIRERMMHCVRENDNVGALKAKNELALLNQEHGIKPWKAFL-PLLQIPLGFGC 241 Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--- 496 ++V+ + W++++ DP + +P I+ + Sbjct: 242 FRVLRGMSALPVPGLDNESVLWLQNVTMPDPY----------YAIPIATGALIFVALRRG 291 Query: 497 --MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 LS + K+ ++ +P+V F ++ +P L +Y+ + V+S+ Q Sbjct: 292 GDTGLSNLMNSKLG--------KSVVYSLPIVTAFTMTFWPGILQLYFLTTGVLSVCQTY 343 Query: 555 VIM 557 ++ Sbjct: 344 IMT 346 >gi|325663379|ref|ZP_08151829.1| hypothetical protein HMPREF0490_02570 [Lachnospiraceae bacterium 4_1_37FAA] gi|325470833|gb|EGC74063.1| hypothetical protein HMPREF0490_02570 [Lachnospiraceae bacterium 4_1_37FAA] Length = 421 Score = 75.0 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 9/100 (9%) Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP---------PADKGQAMI 519 D + + + + + PI+ L+ +I +K+ P P + Sbjct: 233 DAPVNLMMDALKTGAILVAIVALLIPILSGLTQWINIKLMPQSPGMDDRENPMANSMKTM 292 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 MP+ VF + PAGL +YW +S + VQQ I K Sbjct: 293 NMIMPLFSVFMCFTMPAGLGLYWIFSAICRSVQQVAINKY 332 Score = 49.2 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 4/97 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412 + N G+ I+L T+ + PL KQ + + P++ +++K+K Q +Q Sbjct: 38 IENIGLCIILFTIIIYTFMIPLTIKQQKFSKLSAVMNPELQAIQKKYKNKRDQESMLKMQ 97 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + M +Y + + + GC +++Q P+ A++KVI Sbjct: 98 EEMKMVYDKYGTSQMGGCLQLVIQFPILLALWKVIQN 134 >gi|325831899|ref|ZP_08164996.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1] gi|325486220|gb|EGC88672.1| membrane protein insertase, YidC/Oxa1 family [Eggerthella sp. HGA1] Length = 639 Score = 74.6 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 29/207 (14%) Query: 362 IAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT 421 +AI+L TV +K++ PL+ ++ M I P+++ ++ K+ + + + L K Sbjct: 1 MAILLFTVIIKIVLMPLSLWCQWNSIVMVKIMPELNRIKVKYFG-DAEAIGEKQTLLNKK 59 Query: 422 HNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 H+ +PL P+ QI V F + +VI I D A + G++P Sbjct: 60 HHYHPLLSLIPLAAQILVLFGLVEVIHG------------ITDHGAPGTEFL----GMVP 103 Query: 482 FYLPGFMHVGIWPIIMSLSM----FIQMKMSPPP--ADKGQAMILNWMPVVF-VFALSSF 534 G I P++ LS F Q +++P K + N + +V + Sbjct: 104 IEDGGLSW--IMPLLAGLSAVVMGFAQNRINPLQREQSKMEKNTTNGLSIVLSLVLGVYV 161 Query: 535 PAGLIIYWSWSNVISIVQQA---VIMK 558 AG+ YW SN+++IV QA +IM+ Sbjct: 162 AAGMAFYWICSNLMAIVVQALCNLIMR 188 >gi|323337853|gb|EGA79093.1| Oxa1p [Saccharomyces cerevisiae Vin13] Length = 354 Score = 74.6 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 101/311 (32%), Gaps = 28/311 (9%) Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 + + F+ A + T LP T++ A I + Sbjct: 24 TIVLPRPHPSWISFQAKRFNSTGPNANDVSEIQTQLPSIDELTSSAPSLSASTSDLIANT 83 Query: 322 EKDLA-----IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLF 375 + + I + +Y+ + + ++ + G I TT+ ++ L Sbjct: 84 TQTVGELSSHIGYLNSIGLAQTWYWPSDIIQHVLEAVHVYSGLPWWGTIAATTILIRCLM 143 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-------LA 428 FPL K + A +I+P++D L K + + + K + A Sbjct: 144 FPLYVKSSDTVARNSHIKPELDALNNKLMSTTDLQQGQLVAMQRKKLLSSHGIKNRWLAA 203 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 I + + F A+ + + ++ W DL ADP + F + Sbjct: 204 PMLQIPIALGFFNALRHMANYPVDGFANQGVAWFTDLTQADPYLGLQVITAAVFISFTRL 263 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 Q SP + +P++ + A + + +++Y++++ Sbjct: 264 ---------GGETGAQQFSSP------MKRLFTILPIISIPATMNLSSAVVLYFAFNGAF 308 Query: 549 SIVQQAVIMKM 559 S++Q ++ Sbjct: 309 SVLQTMILRNK 319 >gi|268561842|ref|XP_002646541.1| Hypothetical protein CBG20396 [Caenorhabditis briggsae] Length = 325 Score = 74.6 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 38/233 (16%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W ++ + + + + I+ TT+ ++ L + A + ++ Sbjct: 66 WSWWPSSYFRWALESMHMHLDIPWWLTIVATTITLRALLIGVPVMSQKLVAKQSMYRKEM 125 Query: 397 DELREKFKQSPPQVLQKAMI-------QLYKTHNINPLAGCWPILLQIPVF----FAIYK 445 +E R++ ++ + Q ++ +I + VF FAI K Sbjct: 126 NEFRDRIDEARKENNQLLQQQILLEQRDFLRSKDIRLGRQFMVMAANGAVFATQFFAIKK 185 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 +++++ W DL A DP P I + +M + Sbjct: 186 MVAVNYPGLSEGGALWFTDLTATDPYY-------------------ALPFISAATMALVT 226 Query: 506 KM------SPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIV 551 K+ + +++ +PVV S F GL +YW+ SN +S++ Sbjct: 227 KVGIEMGTTADQMPPVMRAFMSYGLPVVIFGVSSQFATGLCVYWTASNAVSLI 279 >gi|330841252|ref|XP_003292615.1| hypothetical protein DICPUDRAFT_157354 [Dictyostelium purpureum] gi|325077115|gb|EGC30849.1| hypothetical protein DICPUDRAFT_157354 [Dictyostelium purpureum] Length = 390 Score = 74.6 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 105/303 (34%), Gaps = 27/303 (8%) Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 + + + I S ++ K +++ IT L + T+ Sbjct: 21 FQSRSFINSTIKSTSFLNNTNNKITYKRSYSTDPNNNSSNITDLSSTTSNITDLSTNATN 80 Query: 314 EFPTIH--HYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 I Y K I E LI + + +L N ++ I + + Sbjct: 81 IVNGIKYADYVKTETISPDESLISAFFSKINFDNIEVLNGLHENYGLSWVAIIAGMALAL 140 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ--VLQKAMIQLYKTHNINPLAG 429 ++ FP+ + +A M+ ++ + ++ + L + Q+ K +N++PL+ Sbjct: 141 RVTTFPVTLRTQRISAKMRMVRLETEKHGYLNDGTTEGRLKLMQLQQQIMKKYNVSPLSA 200 Query: 430 CWPILLQIPVF---FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 P L+ +P+ F I + IS + + W L+A DP Sbjct: 201 IGPNLVLLPLLIYPFLIIRQISDHTTLLDNTSFLWADSLSAVDPYY-------------- 246 Query: 487 FMHVGIWPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + PI+ S + + + + + V+ + F AGL +YW + Sbjct: 247 -----LLPILSSAFQLLSTRFTLTADTHPLMKGFMYSISVLPLLFTIHFSAGLNVYWCTN 301 Query: 546 NVI 548 +++ Sbjct: 302 SIL 304 >gi|282851361|ref|ZP_06260726.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus gasseri 224-1] gi|282557329|gb|EFB62926.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus gasseri 224-1] Length = 271 Score = 74.6 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 92/245 (37%), Gaps = 30/245 (12%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + F + + + + + G AI++ T V+L+ PL + Sbjct: 40 YAWVFSLFGKPIQNIMLAVEHQIGGSNGAGWAIIIITFVVQLIVMPLRLASQRKMTTQQE 99 Query: 392 IQPKIDELREKFKQ---------SPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 K+ + ++ + + +++YK +N++ + GC P+L+Q+P+ Sbjct: 100 KTQKLQPQMKLIQEALKKPGLTQPQQMQISQLQMRVYKDNNMSMMGGMGCLPLLIQLPIM 159 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S E+ + F+G + + I ++ + Sbjct: 160 IGIYQAVAYSKELAASSFFG-------------------ISLGQRSIVLTIIATLLYVIQ 200 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ M P K M L P + F S P L +Y+ +I+I+QQ + + Sbjct: 201 GYLSMVGIPEEQKKAMQMTLILSPAMTFFISISAPGALALYFLVGGLIAILQQVITTFII 260 Query: 561 GAEIG 565 ++ Sbjct: 261 MPKVK 265 >gi|255324091|ref|ZP_05365215.1| putative membrane protein [Corynebacterium tuberculostearicum SK141] gi|255298792|gb|EET78085.1| putative membrane protein [Corynebacterium tuberculostearicum SK141] Length = 314 Score = 74.6 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 112/278 (40%), Gaps = 35/278 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + P+ +M +++ L+ + + I+I+L + V+ + PL S Sbjct: 1 MYEVFMYPVSGIMKFWHWLISSFVGESTAWLISIILLVITVRGVVVPLNWISVRSARIGA 60 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKV 446 I+P+ + ++++ + ++Q L K++N NP AGC P L+ IP F +Y+V Sbjct: 61 LIRPENNRIKKQMNSATTTEEMAELMQEEKNLMKSYNYNPAAGCVPPLIMIPAFIGLYQV 120 Query: 447 I--SISLEMRHAPFWGWIK--DLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM- 501 + ++E R + G + D++A T + G + I ++ +M Sbjct: 121 LLRMSNIE-RGSTTVGMLNASDVSAFRETTFYGAPLTDFAREHGDLINPILIAAIAFTMA 179 Query: 502 --FIQMKMSPPPADKGQA------MILNWMPVVFVFALSSF------PAGLIIYWSWSNV 547 I + S Q +++ ++ +V F L P +I+YW + + Sbjct: 180 NSVISLVRSFRTTQFDQKVNRRVFILMGFLLLVIPFFLWHLAQTGPIPVAIILYWGCAYL 239 Query: 548 ISIVQQA----VIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 ++Q A ++ + + + R + + + Sbjct: 240 FMLIQTAIFEIILHRDYPLTEDVHAMRRESIRRWRKRE 277 >gi|297194184|ref|ZP_06911582.1| membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|297152155|gb|EFH31560.1| membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 245 Score = 74.3 bits (180), Expect = 5e-11, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 16/210 (7%) Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS--PPQVLQKAMIQLYKTHNINPL 427 V+L PL++ + P++ ELR K+ + + LQKA ++LY ++PL Sbjct: 34 LVRLAVHPLSRAAARGQKARTRLAPQLAELRVKYGSNAKDAERLQKATMELYAREKVSPL 93 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT--LFGILPFYLP 485 +GC P LLQ+P FF +Y + S + E+ P L A +T L F Sbjct: 94 SGCLPSLLQLPAFFLMYHLFSNA-EIGGEPNGLLGHALFDAPLGGRWTDALADGGMFGGA 152 Query: 486 GFMHVGIWPIIMSLSMFI------QMKMSPPPADKGQAM--ILNWMPVVFVFALSS---F 534 G ++V ++ I+ +++ F QM +P ++ M + +P++ F L++ Sbjct: 153 GLVYVALFVIVAAVATFTYRRTKRQMAAAPMTGEQMPGMVAMTKVVPLLSFFTLATVAVV 212 Query: 535 PAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P +Y S + V++ + + + Sbjct: 213 PLAAALYVVTSTTWTAVERVFLYRDTPMPV 242 >gi|283768633|ref|ZP_06341545.1| membrane protein insertase, YidC/Oxa1 family [Bulleidia extructa W1219] gi|283105025|gb|EFC06397.1| membrane protein insertase, YidC/Oxa1 family [Bulleidia extructa W1219] Length = 303 Score = 74.3 bits (180), Expect = 5e-11, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 79/278 (28%), Gaps = 26/278 (9%) Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 AK + + F + + +S + G + ++ + Sbjct: 32 AKGNVILITNNTTFQYIFEKESWFSAIFVWPLAWLINHLSMIIGVGGAIALVTIVIHALL 91 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 + + S + + L K ++++P + Sbjct: 92 AAFTSKSQVAMQRMQLIQPELNKIQRKYEGVSTDSARMKMVQEQQALMKKYDVHPGSMML 151 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 LQ P+ A++ I + + F G I L + Sbjct: 152 VQFLQFPIVMAMFFAIQRAESVAKGSFLGMIL------QVTPMKGLQQLIAGNMASLSYI 205 Query: 492 IWPIIMSLSMFIQMKM-------------------SPPPADKGQAMILNWMPV-VFVFAL 531 I I+M S F +K+ Q +++ +M V + Sbjct: 206 ILFILMLGSQFALIKLPLILQKKKAEAEAKKHHRRPEEVGGGSQQVMMQYMMVGMIAIFG 265 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 ++ +G+ YW N++ IV+ ++ K + + R Sbjct: 266 FTWFSGMSYYWFIRNIVDIVKTLIVQKKIDEQKPVGGR 303 >gi|241896112|ref|ZP_04783408.1| Oxa1 family cytochrome oxidase biogenesis protein [Weissella paramesenteroides ATCC 33313] gi|241870626|gb|EER74377.1| Oxa1 family cytochrome oxidase biogenesis protein [Weissella paramesenteroides ATCC 33313] Length = 315 Score = 74.3 bits (180), Expect = 5e-11, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 92/260 (35%), Gaps = 46/260 (17%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 + V G +I++ T+ V+L+ P+ Q + + Sbjct: 22 HADFLKSPLTDFMNWSESTIGGVNAVGWSIIILTLAVRLILLPMMVHQQRNATIQQEKMR 81 Query: 395 KIDELREKFKQSPPQVLQKA--------MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 + +K + + + M+ +Y+ +N++ L G +++Q P+F +Y Sbjct: 82 LLQPQLKKVQDAQKNAQTQEEQLLASQAMMTIYRENNVSLLGGMNFTTLIIQWPIFMGLY 141 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S E+ HA F+G +L++ H I I +++ IQ Sbjct: 142 SAIRYSNEIAHASFFG--INLSS---------------------HAPILAIATAVAYGIQ 178 Query: 505 MKMSPPPADKGQAM-------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +S Q ++ M + + + AG+ +Y+ ++ I+Q +I+ Sbjct: 179 AYLSIIGVPAEQKKQMQMMMYVMPVMMLFMTWVTN---AGIALYFFAGALVMILQTLIII 235 Query: 558 KMHGAEIGLIDRLRSTFSKN 577 L + TF Sbjct: 236 ---VWRPKLKAHVAETFEVK 252 >gi|168334920|ref|ZP_02693040.1| 60 kDa inner membrane insertion protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 407 Score = 74.3 bits (180), Expect = 5e-11, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 16/104 (15%) Query: 471 TNIFTLFGILPFYLPGF-MHVGIWPIIMSLSMFIQMKMSPPPADK--------------- 514 IF L + I P++ S FI K+S + Sbjct: 215 YFIFNLVDSPSQIVASGNYFAFIIPLLAGASTFIFSKISMSQSQPAANKNANGQPNQAEG 274 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + MP++ + P GL +YW N+I + QQ + K Sbjct: 275 MMKTMNIIMPIMMGSISYTVPYGLALYWIAGNLIMMGQQVFVAK 318 Score = 43.4 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 4/96 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412 VG GIAI+L T F +LL PL KQ +T M IQP++ ++++K+ Q Sbjct: 25 VGTLGIAIILFTFFTRLLLTPLQIKQQRTTRGMSKIQPEMQKIQQKYAGRKDQQSQLAQS 84 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 + M LYK +NINP AGC P+L+Q+P+ +A+Y V+ Sbjct: 85 QEMQALYKKYNINPWAGCLPLLIQLPLIYALYAVLR 120 >gi|38234912|ref|NP_940679.1| putative inner membrane protein translocase component YidC [Corynebacterium diphtheriae NCTC 13129] gi|38201177|emb|CAE50901.1| Putative integral membrane protein [Corynebacterium diphtheriae] Length = 317 Score = 74.3 bits (180), Expect = 5e-11, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 106/280 (37%), Gaps = 62/280 (22%) Query: 338 WFYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ +++ +V ++ +AI+L T ++ L Q S Sbjct: 1 MLNFIYWPISAILWFWHKVVSFVLDPGSGLSWVLAIVLLTFTIRALLVKPMLNQMRSMRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP + E+R+K+ Q L + +L K +NP+AGC P+L+Q+PVF ++ V+ Sbjct: 61 MQELQPLMQEIRKKYPN-DQQKLMEETRKLQKEMGVNPVAGCLPVLVQMPVFIGLFHVLR 119 Query: 449 IS---------------LEMRHAPFWGWIKD-------------LAAA--DPTNIFTLFG 478 + A + D L+A P ++ F Sbjct: 120 SFNRTGTGTGQLGLSPEVNRETANYIFSAADVQSFLDARLFGVPLSAFISMPKEMYQAFQ 179 Query: 479 ILPFYLPGFMHVGI-WPIIMSLSMFIQMKMSPPPADK-----GQA--------------- 517 + F V +I+ L+ ++S Q Sbjct: 180 PVDFTRTDIALVAAPLIVIIVLATHFNARLSVDRQKARRESGLQKPPANDQMQMQMDMMN 239 Query: 518 -MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M+L +MP+ +F + GL+ Y +N+ + QQ I Sbjct: 240 RMMLWFMPLTILFTGVLWHLGLLFYMVSNNIWTFFQQRWI 279 >gi|319442315|ref|ZP_07991471.1| putative inner membrane protein translocase component YidC [Corynebacterium variabile DSM 44702] Length = 342 Score = 74.3 bits (180), Expect = 5e-11, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 100/293 (34%), Gaps = 46/293 (15%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 +I++ + L + V ++ + I+L V V+L+ P A + S+ + N Sbjct: 2 QIIEYPVSLVMKAWHVFLTWLGMDAVSSWPLTIVLLVVTVRLILLPFAYRALYSSRMLIN 61 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQ----LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++P + L ++K + + + L + GC P L+QIP F +Y+++ Sbjct: 62 LRPALHALEVEYKGVKDRDRIREKMAKRKQLQQDGGYRMRDGCLPALIQIPFFLGLYRIL 121 Query: 448 -----SISLEMRHAPFWGWI--KDLAAADPTNIFTL------------FGILPFYLPGFM 488 LE G + D+ +F + F L Sbjct: 122 LTVSRPTDLESGTHQSIGALNGTDVGQFLQAEVFGVPLPAYSVMTDERFDFLGTSSSEVF 181 Query: 489 HVGIWPIIMSLSMFIQM---------KMSPPPADKGQAMILNWM----PVVFVF-----A 530 H+ P+ + S+ M+ + +M PV+ +F Sbjct: 182 HI-ALPLCLIASVLTTSNTAYSLKRNWMTLDEDSAVARGLFKFMVLLLPVMLIFPLAFGL 240 Query: 531 LSSFPAGLIIYWSWSNVISIVQ----QAVIMKMHGAEIGLIDRLRSTFSKNYN 579 P ++ YW +N+ ++ Q Q ++ + + + ++ Sbjct: 241 AGPAPVAIMCYWVMNNLWTVAQSVTLQLIMDRKAPYTEEFLAHRKEIGARRKQ 293 >gi|315650198|ref|ZP_07903273.1| stage III sporulation protein J [Eubacterium saburreum DSM 3986] gi|315487555|gb|EFU77863.1| stage III sporulation protein J [Eubacterium saburreum DSM 3986] Length = 417 Score = 74.3 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 100/336 (29%), Gaps = 27/336 (8%) Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 +A + F + + + I + + + + I Sbjct: 17 FAEILGFIMNLIFDIGITNIGIAIIVFTIVINVIMIPLTIKQQKSQKLMTVIQPEI-KAI 75 Query: 319 HHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL 378 K M ++ +K + L+ I L V ++ + Sbjct: 76 QDKYKGKTDNESAMKMNAETRAVYSKYGTSMTGGCLPLLIQMPILFGLYQVIYRIPAYVT 135 Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ-- 436 + + +Q + ++ ++ I+ L P Sbjct: 136 SVRGVFENVANSLMQQPDYINKISDMAKAVRLPVESNDYTITNKVIDLLYKFTPEKWTKL 195 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG-IWPI 495 F ++ V++ S+ + DL+ A P+ +++ I PI Sbjct: 196 GETFPSMNDVLNTSVPLIKQMNSFLGIDLSVA------------PWQGMNHINIAWIIPI 243 Query: 496 IMSLSMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 + ++ F+ K+ + K + MP++ VF + PAG+ IYW S Sbjct: 244 LAGVTQFLSTKVMTVNQPQSSGNESDMAKQMQSMNTVMPLMSVFFCFTLPAGIGIYWIAS 303 Query: 546 NVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + Q ++ ++ + + + +K + Sbjct: 304 ALARTIIQLLVN-YQLKDMDIDKLVENNLAKQNAKR 338 Score = 51.1 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 4/129 (3%) Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 + I +F F++ F + N GIAI++ T+ + ++ PL KQ Sbjct: 1 MDIVLLTKSSTPIIGWFAEILGFIMNLIFDIGITNIGIAIIVFTIVINVIMIPLTIKQQK 60 Query: 385 STANMKNIQPKIDELREKF----KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 S M IQP+I +++K+ + +Y + + GC P+L+Q+P+ Sbjct: 61 SQKLMTVIQPEIKAIQDKYKGKTDNESAMKMNAETRAVYSKYGTSMTGGCLPLLIQMPIL 120 Query: 441 FAIYKVISI 449 F +Y+VI Sbjct: 121 FGLYQVIYR 129 >gi|42526944|ref|NP_972042.1| inner membrane protein [Treponema denticola ATCC 35405] gi|41817259|gb|AAS11953.1| inner membrane protein [Treponema denticola ATCC 35405] Length = 916 Score = 74.3 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 16/197 (8%) Query: 359 NFGIAIMLTTVFVKLLFFPLA----KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 N GI+I+L ++ + ++ P+ + Q A K ++ KI +++ FK ++ Sbjct: 31 NIGISIVLLSLGINIICLPMYNVAEQWQEKERAIQKKMKAKITDIKAVFKGDERYLMLST 90 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIF 474 + H + L + + +QIP F A YK++S S M + + DL + D Sbjct: 91 YYRQNNYHPLYALRSMFALFIQIPFFIAAYKLLSDSPIMA-KSSFLFFTDLGSPDK---- 145 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 G + V I PIIM+L + + + L ++F+ L + Sbjct: 146 -------LLSLGNISVNILPIIMTLINISASAVYTKGLELKDKLTLYITALIFLLLLYNS 198 Query: 535 PAGLIIYWSWSNVISIV 551 P+GL+ YW+ +N+ S++ Sbjct: 199 PSGLVFYWTLNNLFSLL 215 >gi|223042607|ref|ZP_03612656.1| membrane protein OxaA 1 [Staphylococcus capitis SK14] gi|222444270|gb|EEE50366.1| membrane protein OxaA 1 [Staphylococcus capitis SK14] Length = 273 Score = 74.3 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 40/243 (16%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 ++ KPM L+ + L N+G+AI++ + V+ + PL Q + M+ + Sbjct: 31 FYNLFVKPMDSLLHFLGRLFNDNYGLAIIVIVLIVRFILLPLMVIQVKNMHMMREKTNVV 90 Query: 397 DE--------LREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIYK 445 +++ Q + +++ YK++ INP + GC+P+++QIP+ +Y Sbjct: 91 KPELDAIREKIKKADTQEERNAANQLLMKKYKSYGINPFKNMIGCFPVIIQIPILMGLYM 150 Query: 446 VI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + S + P + W +L + I II + FI Sbjct: 151 SLKYPTSDGITKYPHFLWF-NLTEPN---------------------LIMTIIAASMYFI 188 Query: 504 QMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q ++ K Q I+ P+ +A + + L +YWS S IVQ + Sbjct: 189 QPLVNSIHYPKDQRKTYYVIMVVSPIFITYASLTSASALGLYWSISAAFLIVQMHLAHSY 248 Query: 560 HGA 562 +G Sbjct: 249 YGK 251 >gi|254389837|ref|ZP_05005061.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294812826|ref|ZP_06771469.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] gi|326441223|ref|ZP_08215957.1| hypothetical protein SclaA2_09156 [Streptomyces clavuligerus ATCC 27064] gi|197703548|gb|EDY49360.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294325425|gb|EFG07068.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 245 Score = 73.9 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 91/226 (40%), Gaps = 15/226 (6%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + L AI++ T V+L PL++ + P++ ELREK +P Sbjct: 14 LLQPLFLGSATAAAIVVFTALVRLAVHPLSRAAARGQKASARLAPRVAELREKHGGNPE- 72 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAAA 468 L++ + LY +P+AGC P LLQ+P FF +Y + S ++ P LAA Sbjct: 73 RLRRELADLYAKERTSPVAGCLPSLLQLPAFFVLYH-LFSSADIGGEPNELLHHTLLAAP 131 Query: 469 --DPTNIFTLFG-ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA------MI 519 D G +L ++ + +++ + + + + Q + Sbjct: 132 LGDRWTDAVGGGEVLNGAGAVYLVLFAIVTVVAAVNYRRTRKQMAAGPQLQTAAPGMGAM 191 Query: 520 LNWMPVVFVFALSS---FPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + ++P++ L + P +Y S S V++ V+ + A Sbjct: 192 MRFLPLLSFATLITVAVVPLAAALYVVTSTTWSAVERIVLYRDLPA 237 >gi|38234809|ref|NP_940576.1| putative inner membrane protein translocase component YidC [Corynebacterium diphtheriae NCTC 13129] gi|38201073|emb|CAE50797.1| Putative integral membrane protein [Corynebacterium diphtheriae] Length = 435 Score = 73.9 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 88/265 (33%), Gaps = 41/265 (15%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 EM I + + + ++ V V+ + P + Q+ S Sbjct: 1 MLEMFIYPVSGVMRLWHYIFADLFGCSQSQAWVASLFALVVTVRSIIAPFSWMQFKSGRF 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGCWPILLQIPVFFAIY 444 ++PKI L+E++ + + ++ + + + AGC P L+Q+PVF +Y Sbjct: 61 AIMMRPKIKRLKEEYAERTDKESILEQERRQKEIQEEYGYSMAAGCVPALIQVPVFLGLY 120 Query: 445 KVISISLEMR-------HAPFWGWIKD----------LAAADPTNIFTLFGILPFYLPG- 486 +V+ + H P D P L Sbjct: 121 QVLLRMARPKEGLDATVHEPIGMLTSDNVRSFLDTRFFGVPLPAYNSMSPEQLAHLGTDQ 180 Query: 487 -FMHVGIWPIIMSLSMFIQMKMSPPPA--------DKGQAMILNWMPVVFVF-------- 529 +H + P+I++ +F + M D A+ + +V V Sbjct: 181 PTIHAFVLPLIIAACVFTTINMIVSTLRTRYSIDHDSEFAVGMYRFLIVMVLVAPIGLLQ 240 Query: 530 --ALSSFPAGLIIYWSWSNVISIVQ 552 PA + +YW +N+ +++Q Sbjct: 241 TGIFGPIPAAICLYWVANNLWTLIQ 265 >gi|294155969|ref|YP_003560353.1| 60 kDa inner membrane protein [Mycoplasma crocodyli MP145] gi|291600137|gb|ADE19633.1| 60 kDa inner membrane protein [Mycoplasma crocodyli MP145] Length = 630 Score = 73.9 bits (179), Expect = 7e-11, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 98/263 (37%), Gaps = 37/263 (14%) Query: 315 FPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLL 374 I + + + F LI + Y L I +++ LL Sbjct: 365 QKPITTWSESWGLGPFYGLIVYPISYVSQALRQSLPDLSGWSTIFVIIIVVVIIKAFSLL 424 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV--LQKAMIQLYKTHNINPLAGCWP 432 + +++ + +I+ + F + Q+ + +LYK +NINPL Sbjct: 425 ITFKSIVGQSIQEDLRGKKAQIEAKYKDFGNNKMMKARKQQELQKLYKKNNINPLDQFLS 484 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +++ +P+FFA+++VI E++ + G F+ + + ++GI Sbjct: 485 VIVSMPIFFAMWRVIQCMPEIKSTIWLG-----------LNFSSTSYSSLFAGQWQYLGI 533 Query: 493 WPIIMSLSMFIQM-------------KMSPP------PADKGQAMILNWMPVVFVFALSS 533 I + + + ++S ++K Q +++ +VF+ Sbjct: 534 IVIAVGV-QLVSQILPRLLNRRRLKERISIAENEALKKSEKTQRIVM----IVFLVITLM 588 Query: 534 FPAGLIIYWSWSNVISIVQQAVI 556 F AG+ +YW + + +I Q I Sbjct: 589 FTAGVQVYWIITGLWTIGQTIGI 611 >gi|227543308|ref|ZP_03973357.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51866] gi|227180921|gb|EEI61893.1| inner membrane protein translocase component YidC [Corynebacterium glucuronolyticum ATCC 51866] Length = 372 Score = 73.9 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 97/269 (36%), Gaps = 43/269 (15%) Query: 347 FMLMSYFYNLVGNFGIAI--MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 + + N + + + V+ L PLA K YVS ++P + L+E ++ Sbjct: 17 HTFLHGGLGVNENIAWILSFVGLIITVRSLIAPLAWKMYVSARRTAIMRPHMASLKEDYR 76 Query: 405 QSPPQVLQKA----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKV---ISISLEMRHAP 457 + Q QL H +NP+AGC P+L+Q PV +Y++ I+ Sbjct: 77 GKLDKESQAELSRKSQQLMDEHEVNPMAGCAPMLIQFPVILGLYRMVLRIARPEGGLGTS 136 Query: 458 FWGWIKDLAAADPTNIFT--LFGILPFYLPGF--------------MHVGIWPIIMSLSM 501 + + L++AD + FG+ + I PI+++ + Sbjct: 137 PYPSVGFLSSADVGSFLETRAFGLPIAAYASMPEAQLNELGTTGDHLVHTITPIVIAATC 196 Query: 502 FIQMKM------SPPPADK------GQAMILNWM----PVVFVFALSS--FPAGLIIYWS 543 F+ + M S D + + + P + + + P +I YW Sbjct: 197 FMTLNMILSTIRSFETMDWRSGFAVNMSFSMVFFAIYTPFMILTLAFNGPIPVAIIFYWF 256 Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 +N ++ Q V+ M L + Sbjct: 257 VNNFWTMSQLIVLWTMLTVRHPLTPEFKE 285 >gi|314934498|ref|ZP_07841857.1| SpoJ family protein [Staphylococcus caprae C87] gi|313652428|gb|EFS16191.1| SpoJ family protein [Staphylococcus caprae C87] Length = 273 Score = 73.9 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 40/243 (16%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 ++ KPM L+ + L N+G+AI++ + V+ + PL Q + M+ + Sbjct: 31 FYNLFVKPMDSLLHFLGRLFNDNYGLAIIVIVLIVRFILLPLMVIQVKNMHMMREKTNVV 90 Query: 397 DE--------LREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIYK 445 +++ Q + +++ YK++ INP + GC+P+++QIP+ +Y Sbjct: 91 KPELDAIREKIKKADTQEERNAANQLLMKKYKSYGINPFKNMIGCFPVIIQIPILMGLYM 150 Query: 446 VI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + S + P + W +L + I II + FI Sbjct: 151 SLKYPTSDGITKYPHFLWF-NLTEPN---------------------LIMTIIAASMYFI 188 Query: 504 QMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q ++ K Q I+ P+ +A + + L +YWS S IVQ + Sbjct: 189 QPLVNSIHYPKDQRKTYYVIMVVSPIFITYASLTSASALGLYWSISAAFLIVQMHLAHSY 248 Query: 560 HGA 562 +G Sbjct: 249 YGK 251 >gi|306834795|ref|ZP_07467859.1| membrane protein OxaA [Corynebacterium accolens ATCC 49726] gi|304569323|gb|EFM44824.1| membrane protein OxaA [Corynebacterium accolens ATCC 49726] Length = 304 Score = 73.9 bits (179), Expect = 8e-11, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 94/266 (35%), Gaps = 60/266 (22%) Query: 354 YNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 + +AI+L T +K L Q S+ M+ IQPK+ E+R K+ + Sbjct: 3 PAWGITWILAIVLLTWTLKALMVKPTVSQIRSSRKMQEIQPKVQEIRAKY-GKDQARAAQ 61 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SLEMRHAPFWGWIKDLAAADP 470 M ++YK + P+AGC P+L+QIP+F ++ V+ ++ + + ++ D Sbjct: 62 EMQKVYKDAGVRPMAGCLPVLVQIPMFIGLFHVLRSFDRTVSVAGGFGHPSGEPMSIEDN 121 Query: 471 TNIFTLFGILPFYLPGFMHVGIW------------PIIMSLSMFIQ-------------- 504 N P + F+ I+ P++ ++ Q Sbjct: 122 ANTANYIFK-PELVQQFLDAKIFGVPLVTNLRLNSPLVEGVTTTTQAAFIIVPMIAVIVV 180 Query: 505 -------MKMSPPPADKGQAMI----------------------LNWMPVVFVFALSSFP 535 M ++ + Q L MP + +F+ +P Sbjct: 181 LMHFNARMSLNRQEKRRAQGKTSAPQGQNAEMMQQQMAMMSKMMLWVMPAMLIFSGFIWP 240 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHG 561 GL+ Y + V + Q +I Sbjct: 241 IGLLFYMLSNTVWTFFQTRIIYGKMD 266 >gi|227502237|ref|ZP_03932286.1| inner membrane protein translocase component YidC [Corynebacterium accolens ATCC 49725] gi|227077061|gb|EEI15024.1| inner membrane protein translocase component YidC [Corynebacterium accolens ATCC 49725] Length = 327 Score = 73.5 bits (178), Expect = 8e-11, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 101/290 (34%), Gaps = 67/290 (23%) Query: 338 WFYFIAKPMFMLMSYFYN---------LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ +++ + +AI+L T +K L Q S+ Sbjct: 1 MLNFIYWPISAVLWFWHWLLSLVMDPAWGITWILAIVLLTWTLKALMVKPTVAQIRSSRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ IQPK+ E+R K+ + M ++YK + P+AGC P+L+QIP+F ++ V+ Sbjct: 61 MQEIQPKVQEIRAKY-GKDQARAAQEMQKVYKDAGVRPMAGCLPVLVQIPMFIGLFHVLR 119 Query: 449 -------ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW-------P 494 ++ + H + A IF + F V + P Sbjct: 120 SFDRTVSVAGGLGHPSGEPMSIEANANTANYIFKPELVQQFLDAKIFGVPLVTNLRLNSP 179 Query: 495 IIMSLSMFIQ---------------------MKMSPPPADKGQAMI-------------- 519 ++ ++ Q M ++ + Q Sbjct: 180 LVEGVTTTTQAAFIIVPMIAVIVVLMHFNARMSLNRQEKRRAQGKTSAPQGQNAEMMQQQ 239 Query: 520 --------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 L MP + +F+ +P GL+ Y + V + Q +I Sbjct: 240 MAMMSKMMLWVMPAMLIFSGFIWPIGLLFYMLSNTVWTFFQTRIIYGKMD 289 >gi|317495530|ref|ZP_07953898.1| YidC/Oxa1 family membrane protein insertase [Gemella moribillum M424] gi|316914344|gb|EFV35822.1| YidC/Oxa1 family membrane protein insertase [Gemella moribillum M424] Length = 284 Score = 73.5 bits (178), Expect = 9e-11, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 100/265 (37%), Gaps = 47/265 (17%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----- 391 ++ KPM + +S ++ VG++G +I++ T+ ++++ P K Y S + Sbjct: 15 TFYETFVKPMDISLSKIHDYVGSWGWSIVIITLIIRIIILPFMLKNYKSQNEARRGQALA 74 Query: 392 ------IQPKIDELREK-----------FKQSPPQVLQKAMIQLYKTHNINPLA--GCWP 432 +Q K REK ++ LQ+ + + K +N PL GC P Sbjct: 75 RPELEVVQAKQKAAREKEARAISNEEKTQARAELMELQREQMAIMKKYNAMPLTVGGCLP 134 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +L+Q+P ++ +S + A D T + G+ ++ I Sbjct: 135 LLIQMPFLTGLFFTLSNP--LYSAGII---------DSTFL----GVFSLGTRSYILPVI 179 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMIL-------NWMPVVFVFALSSFPAGLIIYWSWS 545 I+ ++ + M+M+P GQ + PV+ + +Y+ Sbjct: 180 AFIVYAIQTRLAMRMTPQVTQPGQEQLQGQMQMMQWLSPVMIAVFSFWVAGAVAVYYIVG 239 Query: 546 NVISIVQQAVIMKMHGA-EIGLIDR 569 V I Q + K++ + + Sbjct: 240 GVFLIFQTYLGYKIYPPYKPEKQKK 264 >gi|213400725|gb|ACJ47011.1| hypothetical protein [Wolbachia endosymbiont of Coptotermes acinaciformis] Length = 171 Score = 73.5 bits (178), Expect = 9e-11, Method: Composition-based stats. Identities = 60/164 (36%), Positives = 93/164 (56%), Gaps = 2/164 (1%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282 D L E Y D+ K + S +W G +DKYW + IP K + K+ + + Sbjct: 8 FDNKLEEWTYKDVAKKHLIKTSTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNI 67 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 ++Q F +ILPG S++ N+ FAGAK+ + Y+ L IP F+ +D+G YFI Sbjct: 68 DKFQVDFVKPYKSILPGTSVSNVNYFFAGAKKLNLLDSYKSTLGIPLFDKAVDFGVLYFI 127 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 KP+F+L+ YF+ ++ NFG+AI+L T+ +KLL L+ + YVS Sbjct: 128 TKPVFLLLEYFHFVLKNFGLAILLLTLVIKLLMLTLSNRSYVSM 171 >gi|163814992|ref|ZP_02206379.1| hypothetical protein COPEUT_01145 [Coprococcus eutactus ATCC 27759] gi|158449675|gb|EDP26670.1| hypothetical protein COPEUT_01145 [Coprococcus eutactus ATCC 27759] Length = 444 Score = 73.5 bits (178), Expect = 9e-11, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 19/124 (15%) Query: 463 KDLAAA-DPTNIFT--LFGILPFYLPGF--MHVGIWPIIMSLSMFIQMKMSP-------- 509 DLA+ D + LFG+ PG+ I PI +L F+Q K+S Sbjct: 218 ADLASYVDQFHNMNQFLFGLNIADAPGWKLSIALIVPIASALLQFLQTKISMKSSQNSNM 277 Query: 510 ----PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI--MKMHGAE 563 A+ ++ +MPV+ + + P + +YW +VI I+ Q ++ H + Sbjct: 278 DSNQQTANNMMKGMMYYMPVMSLIFCITLPIAIGLYWIVGSVIMIISQLIVDAYYNHQDK 337 Query: 564 IGLI 567 L+ Sbjct: 338 DELL 341 Score = 55.8 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 4/115 (3%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F +I + + S+ N + ++L T ++ FPL KQ S+ M IQP+I + Sbjct: 22 FNWIYMFVGFIGSHMGFTYVNLSVCVILFTFVLRGALFPLYFKQQRSSKIMSFIQPEIAK 81 Query: 399 LREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +K+K Q Q+ ++ K + ++ +GC L+Q+P+F+ +Y+VI Sbjct: 82 ATKKYKGKTDQESMMKQQQETQKIQKKYGVSMASGCLTSLIQLPIFYGLYRVIQN 136 >gi|330916229|ref|XP_003297342.1| hypothetical protein PTT_07706 [Pyrenophora teres f. teres 0-1] gi|311330036|gb|EFQ94560.1| hypothetical protein PTT_07706 [Pyrenophora teres f. teres 0-1] Length = 488 Score = 73.5 bits (178), Expect = 9e-11, Method: Composition-based stats. Identities = 27/244 (11%), Positives = 80/244 (32%), Gaps = 32/244 (13%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLL 374 + + + + A + S + + +A+ T ++ + Sbjct: 92 RLIDHVGQMKEMGLDYGYGMTTLMEQAIETIYISSGWGWAGSIMAAAVAVRCATFALQAM 151 Query: 375 FFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL 434 K +Q K++ + + + + ++ K + L+ ++ Sbjct: 152 SSDKMAVMASLGPVTKPLQDKMEAAIARGDKQGADMYRMQQQEVIKPYVGGMLSMTGFMV 211 Query: 435 LQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 +Q + F+ ++++ E+ + W DL++ DP Sbjct: 212 VQGWIGFSAFRLLRAMSELPIPGMTQDGFLWFADLSSRDPYF------------------ 253 Query: 491 GIWPIIMSLSMFIQMKM------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 + P+ + M+ K+ +P A+ Q +++ +M + A + +Y+ Sbjct: 254 -VLPVATTAIMYSVFKLGGETGVNPSQAN-TQKIMMTFMAFALGAVTAFQAAAIQLYFLT 311 Query: 545 SNVI 548 S ++ Sbjct: 312 SAIL 315 >gi|254578882|ref|XP_002495427.1| ZYRO0B11132p [Zygosaccharomyces rouxii] gi|238938317|emb|CAR26494.1| ZYRO0B11132p [Zygosaccharomyces rouxii] Length = 389 Score = 73.5 bits (178), Expect = 9e-11, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 82/243 (33%), Gaps = 27/243 (11%) Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAK 380 E + + +++ A + + + G I + T+ V+LL FP Sbjct: 79 EASNHVGYLNSIGLAQTWWWPADVIQHALELVHVYSGLPWWGSICVVTITVRLLMFPFYV 138 Query: 381 KQYVSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNIN---PLAGCWPI 433 K + A +I+P++D+L + + Q + +L + I A I Sbjct: 139 KSSDTVARNSHIKPQMDKLNAELMSTTDLAEGQKVALKRKRLLAENGIKNRWMAAPILQI 198 Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 + + F I + + ++ W DL+ ADP + G+ Sbjct: 199 PVALGFFGGIRHMANFPVDGFTNQGIAWFTDLSQADPY-----------LGLQVITAGVL 247 Query: 494 PII--MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + Q + +P++ + A + A + +Y++ + +++ Sbjct: 248 IGFSRLGGETGAQQW------SPVMKRVFTIIPLISIPATMNVSAAVALYFAVNGTCAVI 301 Query: 552 QQA 554 Q Sbjct: 302 QTL 304 >gi|86606439|ref|YP_475202.1| inner membrane protein translocase component YidC [Synechococcus sp. JA-3-3Ab] gi|86554981|gb|ABC99939.1| inner membrane protein OxaA [Synechococcus sp. JA-3-3Ab] Length = 392 Score = 73.5 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 6/115 (5%) Query: 471 TNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVF 527 I L + F G +H I ++ +S+++ ++ D Q+ + PV+F Sbjct: 251 LFIDKLGRVGAFDPDGTIHWDIIGMIVLFGVSIYLNQSLTNAGQEDPSQSSMARITPVLF 310 Query: 528 VFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 FP AG+++Y SN+ VQ ++ + L + + + Sbjct: 311 SAMFLFFPLPAGVLLYILVSNIFQTVQTFLLSR-EPLPENLQQLVEEERRRAAQA 364 Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 70/121 (57%), Gaps = 5/121 (4%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN-- 391 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + MK Sbjct: 1 MDFGVGFLSNNVMLPILDFFYGIVPSYGLAIIFLTLVIRFALYPLNVGSIRNMRRMKVIN 60 Query: 392 --IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +Q ++ E++EK++ PQ L++A +LY +NPL GC P+L+Q+PV FA++ + Sbjct: 61 PLMQRRMREIQEKYRD-DPQKLREAQAKLYSELGVNPLGGCLPLLIQMPVLFALFATLRG 119 Query: 450 S 450 S Sbjct: 120 S 120 >gi|326469022|gb|EGD93031.1| hypothetical protein TESG_00588 [Trichophyton tonsurans CBS 112818] gi|326480652|gb|EGE04662.1| hypothetical protein TEQG_03529 [Trichophyton equinum CBS 127.97] Length = 484 Score = 73.5 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 87/244 (35%), Gaps = 38/244 (15%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + + + + +L+ + G + V ++++ F + +K Sbjct: 123 KELGLDYGWGPSSMIQLLLETLHITGGLPWWTATVAAAVLIRVVLFNSIVSAADVSTKLK 182 Query: 391 NIQPKIDELREKFKQSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + P+ +RE+ + ++ + L + H I P LLQ+P+ F Sbjct: 183 ALSPRTTPIRERMMRCVRENDNVGAMKAKQELASLNQEHGIKPWKAFI-PLLQVPLGFGC 241 Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 ++V+ + + W++ + DP + P+ Sbjct: 242 FRVLRGMSALPVPGLDSESVLWLQSVTMPDPFF-------------------VMPVATGA 282 Query: 500 SMFIQMK------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 MF+ +K MS ++ +P+V V ++ +P L +Y+ + +S+ Q Sbjct: 283 LMFVALKRGGDVGMSNLMNSALGKGMVYGLPIVTVCTMTFWPGILQLYFLTTGALSVCQT 342 Query: 554 AVIM 557 ++ Sbjct: 343 YIMT 346 >gi|6321002|ref|NP_011081.1| Oxa1p [Saccharomyces cerevisiae S288c] gi|730247|sp|P39952|OXA1_YEAST RecName: Full=Mitochondrial inner membrane protein OXA1; AltName: Full=Cytochrome oxidase biogenesis protein OXA1; AltName: Full=Oxidase assembly protein 1; Flags: Precursor gi|521092|emb|CAA52465.1| PET 1402 [Saccharomyces cerevisiae] gi|603394|gb|AAB64681.1| Oxa1p [Saccharomyces cerevisiae] gi|832918|emb|CAA54675.1| OXA1 [Saccharomyces cerevisiae] gi|51013715|gb|AAT93151.1| YER154W [Saccharomyces cerevisiae] gi|151944872|gb|EDN63131.1| cytochrome oxidase activity [Saccharomyces cerevisiae YJM789] gi|190405713|gb|EDV08980.1| inner membrane protein OXA1, mitochondrial precursor [Saccharomyces cerevisiae RM11-1a] gi|256272066|gb|EEU07078.1| Oxa1p [Saccharomyces cerevisiae JAY291] gi|259146083|emb|CAY79343.1| Oxa1p [Saccharomyces cerevisiae EC1118] gi|285811787|tpg|DAA07815.1| TPA: Oxa1p [Saccharomyces cerevisiae S288c] gi|323309318|gb|EGA62536.1| Oxa1p [Saccharomyces cerevisiae FostersO] gi|323333812|gb|EGA75203.1| Oxa1p [Saccharomyces cerevisiae AWRI796] gi|323355337|gb|EGA87162.1| Oxa1p [Saccharomyces cerevisiae VL3] Length = 402 Score = 73.5 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 101/311 (32%), Gaps = 28/311 (9%) Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 + + F+ A + T LP T++ A I + Sbjct: 24 TIVLPRPHPSWISFQAKRFNSTGPNANDVSEIQTQLPSIDELTSSAPSLSASTSDLIANT 83 Query: 322 EKDLA-----IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLF 375 + + I + +Y+ + + ++ + G I TT+ ++ L Sbjct: 84 TQTVGELSSHIGYLNSIGLAQTWYWPSDIIQHVLEAVHVYSGLPWWGTIAATTILIRCLM 143 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-------LA 428 FPL K + A +I+P++D L K + + + K + A Sbjct: 144 FPLYVKSSDTVARNSHIKPELDALNNKLMSTTDLQQGQLVAMQRKKLLSSHGIKNRWLAA 203 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 I + + F A+ + + ++ W DL ADP + F + Sbjct: 204 PMLQIPIALGFFNALRHMANYPVDGFANQGVAWFTDLTQADPYLGLQVITAAVFISFTRL 263 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 Q SP + +P++ + A + + +++Y++++ Sbjct: 264 ---------GGETGAQQFSSP------MKRLFTILPIISIPATMNLSSAVVLYFAFNGAF 308 Query: 549 SIVQQAVIMKM 559 S++Q ++ Sbjct: 309 SVLQTMILRNK 319 >gi|298246693|ref|ZP_06970498.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter racemifer DSM 44963] gi|297549352|gb|EFH83218.1| membrane protein insertase, YidC/Oxa1 family [Ktedonobacter racemifer DSM 44963] Length = 296 Score = 73.1 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 95/243 (39%), Gaps = 37/243 (15%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 P+F + Y +G+F +A+++ TV + +L PL +Q + +QP+I LR Sbjct: 12 FTYPIFNALLLLYAWLGDFSLALVVLTVSISVLLLPLTLRQIRQGRITRRLQPEIQALRR 71 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS------------- 448 ++ +A+ +LYK + I + +L+Q P++ +Y ++ Sbjct: 72 RYASDRL-AQTRALQELYKAYGIRTSSTFLLLLIQAPIYSGLYFALNMILQAPLVADINR 130 Query: 449 ---------ISLEMRHAPFWG-----WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 SL H ++ W L A DPT I L L L ++ + Sbjct: 131 YLYPFVVHVTSLPNLHLTWFTVLNATWHISLGAPDPTAILPLLTGLLTLLQTWLTQPLAA 190 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF-ALSSFPAGLIIYWSWSNVISIVQQ 553 + + + + +L +P F AGL +Y S +++I QQ Sbjct: 191 VEA--------RDTMQHVSQNMQWLLLLLPAAMTVLIAWHFAAGLALYRVVSLLMNIGQQ 242 Query: 554 AVI 556 ++ Sbjct: 243 YIV 245 >gi|213400721|gb|ACJ47009.1| hypothetical protein [Wolbachia endosymbiont of Litomosoides sigmodontis] Length = 171 Score = 73.1 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 58/161 (36%), Positives = 90/161 (55%), Gaps = 2/161 (1%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282 D L E Y +I K + S +W G +DKYW + IP + + K+ S +G Sbjct: 8 FDNKLEEWTYKNIAKKHLIKTSTSKKNWFGFADKYWLTAIIPEESDKTNVSIKHTSANGI 67 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 ++Q F+ IL G S + N+ FAGAK+ + +Y+ L IP F+ +D+G YFI Sbjct: 68 DKFQVDFAKPRKNILSGTSASNVNYFFAGAKKLNLLDYYKSILNIPLFDKAVDFGVLYFI 127 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 KP+F+L+ YF ++ NFG+AI+L T+ +KL PL+ K + Sbjct: 128 TKPVFLLLEYFNFVLRNFGLAILLLTLVIKLFMLPLSNKSH 168 >gi|302912042|ref|XP_003050625.1| hypothetical protein NECHADRAFT_48589 [Nectria haematococca mpVI 77-13-4] gi|256731562|gb|EEU44912.1| hypothetical protein NECHADRAFT_48589 [Nectria haematococca mpVI 77-13-4] Length = 481 Score = 73.1 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 94/290 (32%), Gaps = 33/290 (11%) Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 P + + A A+ A+ T P T + P I + E+ Sbjct: 97 PVTPSETIEATSATVNDAAGIPAEAVADVTTAEPTAVTTDFDLEAIANLASPNILNMEEK 156 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQY 383 L F I + + M + + + +G +I+ T + ++++ F + Sbjct: 157 LG---FLHEIGLDYGWGPTSMMQWALEHVHVYSGLGWGGSIIATALILRVIMFYPQVRSL 213 Query: 384 VSTANMKNIQ--------PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL 435 A M+ ++ + + + + + ++ + +G + Sbjct: 214 RFNAAMQQMKKDPRGQEAMDLVKKGYQSGDREMLQKGQFLNKMVREQYGAKNSGMLWSFV 273 Query: 436 QIPVFFAIYKVISISL-----EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 QIP F ++++IS + M +A + W DL A+DP + G Sbjct: 274 QIPFSFGLFRIISGMVHIPVPSMENAG-FLWFTDLTASDPYFLLPALGTS---------- 322 Query: 491 GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 ++ M + K +P ++ V + AG+ + Sbjct: 323 ----LLFGA-MAVNAKYTPASQKAMMKKMMWVFGTVGFIGTTFLSAGVNL 367 >gi|154285426|ref|XP_001543508.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150407149|gb|EDN02690.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 499 Score = 73.1 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 109/308 (35%), Gaps = 42/308 (13%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 F+S S + + P S + L + A + Sbjct: 71 PSSARFNSTATTPMPPSD-PATSVSVDTVLDTPISSGAQSFDLLSAADLASV--DISRIP 127 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI-MLTTVFVKLLFFPLAKKQYV 384 + + + + ++ + ++ F+ G + T VF+++L A Sbjct: 128 EKLGYLKAVGLDYGWGPSRVIETILESFHIYGGLPWWGAAIGTAVFLRVLVLKFAMDASD 187 Query: 385 STANMKNIQPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 ++A + +++ L+E+ ++ Q Q+ + +THNI L + L+Q+ Sbjct: 188 TSAKVASVKHLTQPLQEEVQRCYRENDTVGMQRAQQERKIINETHNIKLLKLAF-PLVQV 246 Query: 438 PVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 P+ F ++V+ + + + W+ ++ DP I Sbjct: 247 PLSFGAFRVLRGMSALPVPGLDSESFLWLHNVTLHDPYF-------------------IL 287 Query: 494 PIIMSLSMFIQMKM---SPPPADKGQAM---ILNW-MPVVFVFALSSFPAGLIIYWSWSN 546 PI + M K+ + D M I+ + +PV+ S P L ++++ ++ Sbjct: 288 PITTGVVMHYTFKLGGETAGANDPTTMMAKPIMLYGLPVLSAICTSFLPGILQMFFATTS 347 Query: 547 VISIVQQA 554 V++I Q Sbjct: 348 VLAIGQSY 355 >gi|239636059|ref|ZP_04677073.1| putative membrane protein [Staphylococcus warneri L37603] gi|239598330|gb|EEQ80813.1| putative membrane protein [Staphylococcus warneri L37603] Length = 270 Score = 73.1 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 100/241 (41%), Gaps = 40/241 (16%) Query: 338 WFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----I 392 ++ +PM L+ F L N+G+AI+ + V+ + P Q + M+ + Sbjct: 30 FYNTFVQPMDRLLHLFGRLFNDNYGLAIIAIVLIVRFILLPFMLIQVKNMHIMREKTKVV 89 Query: 393 QPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYK 445 QP+ID++REK K++ Q + ++ YK + INP GC P+++QIP+ +Y Sbjct: 90 QPQIDKIREKIKEADSQEERNAANQLLMNKYKQYGINPFKNIIGCLPVIIQIPILMGLYM 149 Query: 446 VI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + S + P + W +L + + +I +L FI Sbjct: 150 SLKYPSSDGITKYPRFLWF-NLTEPN---------------------IMMTLIAALMYFI 187 Query: 504 QMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 Q ++ K + ++ P+ +A + L +YWS S I+Q + Sbjct: 188 QPLVNSIHYPKDERKTYYVMMILSPIFITYASLHSASALGLYWSVSAAFLIIQMHFAHRH 247 Query: 560 H 560 + Sbjct: 248 Y 248 >gi|227547696|ref|ZP_03977745.1| inner membrane protein translocase component YidC [Corynebacterium lipophiloflavum DSM 44291] gi|227080222|gb|EEI18185.1| inner membrane protein translocase component YidC [Corynebacterium lipophiloflavum DSM 44291] Length = 377 Score = 73.1 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 106/283 (37%), Gaps = 42/283 (14%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + + ++L F N +A ++L V +++L PL Y + + Sbjct: 4 AFVYPVSAVMKFWHWLLAGVFGMESSNSWVASVVLLVVTIRVLIAPLQWYTYKTARVLVL 63 Query: 392 IQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 ++P++ + ++ Q +A +L+K +N NPLAGC P L+QIP F +Y+++ Sbjct: 64 MRPRMAAIEAQYGDEITPENVQAHARARKELHKEYNYNPLAGCLPALIQIPFFLGLYRLL 123 Query: 448 -----SISLEMR--------HAPFWGWIKDLAAADPTNIFTL---FGILPFYLPGFMHVG 491 S + R + L P + F L L + Sbjct: 124 LWMAVPSSSDGRSLGVLSPAEVESFRETTLLGVPLPAYVSMTPEQFAHLGTTLADVRTLA 183 Query: 492 IWPIIMSL--SMF---IQMKMSPPPADKGQAM-------ILNWMPVV-----FVFALSSF 534 I +I ++ + + S D G A+ + +P+V Sbjct: 184 IPMLIAAVCFTTLNLVLSQIRSRSTLDWGSAVAHRSYAFVWALVPIVVLGLAIAGLTGLV 243 Query: 535 PAGLIIYWSWSNVISIVQQ----AVIMKMHGAEIGLIDRLRST 573 P L++YW N+++++Q ++++++ + + Sbjct: 244 PVALLLYWVSGNILTLIQTIVLWYLMVRIYPLDDDHRAHISEK 286 >gi|325093752|gb|EGC47062.1| conserved hypothetical protein [Ajellomyces capsulatus H88] Length = 496 Score = 73.1 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 109/308 (35%), Gaps = 42/308 (13%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 F+S A + + P S + L + A + Sbjct: 68 PSSARFNSTATTPIPPSD-PTASVPVDSVLDAPISSGAQSIDLLSAADLANV--DISQIP 124 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI-MLTTVFVKLLFFPLAKKQYV 384 + + + + ++ + ++ F+ G + T VF+++L A Sbjct: 125 EKLGYLKAVGLDYGWGPSRVIETILESFHIYGGLPWWGAAIGTAVFLRILVLKFAMDASD 184 Query: 385 STANMKNIQPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 ++A + +++ L+E+ ++ Q Q+ + +THNI L + L+Q+ Sbjct: 185 TSAKVASVKHLTQPLQEEVQRCYRENDTAGMQRAQQERKIINETHNIKLLKLAF-PLVQV 243 Query: 438 PVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 P+ F ++V+ + + + W+ ++ DP I Sbjct: 244 PLSFGAFRVLRGMSALPVPGLDSESFLWLHNVTLHDPYF-------------------IL 284 Query: 494 PIIMSLSMFIQMKM---SPPPADKGQAM---ILNW-MPVVFVFALSSFPAGLIIYWSWSN 546 PI + M K+ + D M I+ + +PV+ S P L ++++ ++ Sbjct: 285 PIATGVVMHYTFKLGGETAGANDPTTMMAKPIMLYGLPVLSAICTSFLPGILQMFFATTS 344 Query: 547 VISIVQQA 554 V++I Q Sbjct: 345 VLAIGQSY 352 >gi|223983638|ref|ZP_03633816.1| hypothetical protein HOLDEFILI_01097 [Holdemania filiformis DSM 12042] gi|223964405|gb|EEF68739.1| hypothetical protein HOLDEFILI_01097 [Holdemania filiformis DSM 12042] Length = 289 Score = 72.7 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 36/240 (15%), Positives = 84/240 (35%), Gaps = 22/240 (9%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +F F + ++ + + + I +L + + + Sbjct: 57 FFVFPLAKLVNFLTPYVGVALSVSIVTLLVHLITLVFTIKSTVMTQKMQVIQPEMNRITK 116 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + K + + M +LYK + INP +Q+P+ A+Y + + + + Sbjct: 117 KYEGKTDERSQMAQAQEMQRLYKENGINPFGAIISSFIQLPIIMAVYMSVQRAESVVNGT 176 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 WG L+ + L G++ + I SM + ++ A K A Sbjct: 177 MWG----LSLKET----PLHGVMSGQWLYLVLFVFMAICQIGSMMLPQFLATQKAKKEAA 228 Query: 518 --------------MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ +M V + ++PA + IYW+ S+++ I + + ++ + Sbjct: 229 AHHKKYEKTKQPGGNMMIYMMVFILVISVNWPAAMTIYWAVSSLVMIFKTLFVQFIYIDK 288 >gi|153811980|ref|ZP_01964648.1| hypothetical protein RUMOBE_02373 [Ruminococcus obeum ATCC 29174] gi|149831879|gb|EDM86965.1| hypothetical protein RUMOBE_02373 [Ruminococcus obeum ATCC 29174] Length = 331 Score = 72.7 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 12/94 (12%) Query: 499 LSMFIQMKMSPPP-----------ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + + +K+ P + MP++ F +FP GL IYW S+V Sbjct: 167 ATQMLNLKLMPQAATQNGNNDNNAMASSMKTMNTVMPLMSAFFCFTFPVGLGIYWIASSV 226 Query: 548 ISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + +QQ +I + H ++ + D + K + Sbjct: 227 VRSIQQLLINR-HLNKMNIDDLVNENMKKMEAKR 259 >gi|260588821|ref|ZP_05854734.1| membrane protein OxaA [Blautia hansenii DSM 20583] gi|260540600|gb|EEX21169.1| membrane protein OxaA [Blautia hansenii DSM 20583] Length = 415 Score = 72.7 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 12/129 (9%) Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F V++ + + H L AD G + + P++ Sbjct: 194 FQGFADVLNQTADQLH--PMQNFLGLNIADNPWALIQSGWSTQHYLLIFAAVLIPVLAWG 251 Query: 500 SMFIQMKM----------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 + + MK+ +P + + +MP++ F +FP G+ IYW VI Sbjct: 252 TQVLNMKLVQTASNTSNGTPSQMETTMKTMNTFMPLMTAFICFTFPVGIGIYWIIGAVIR 311 Query: 550 IVQQAVIMK 558 VQQ VI + Sbjct: 312 SVQQVVINR 320 Score = 59.2 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 78/148 (52%), Gaps = 10/148 (6%) Query: 336 WGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 ++A+ + LM+ Y++ V N G+ I++ T+ + PL KQ + P Sbjct: 1 MPIVNWVAEVLGWLMNGIYSIGVHNLGLCIIIFTLVIYAFMTPLQIKQQKFAKMNAVMAP 60 Query: 395 KIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++ +++K++ Q +Q+ + +Y+ + ++P C +L+Q+P+FFA+Y+VI Sbjct: 61 ELQNIQKKYRGKKDQNSQLKMQEETMGVYEKYGVSPTGSCLQMLIQMPIFFALYQVI--- 117 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFG 478 ++ + G IKD+ A+ ++I + G Sbjct: 118 --IKIPGYIGGIKDVFASAVSHITDVSG 143 >gi|39940712|ref|XP_359893.1| hypothetical protein MGG_04884 [Magnaporthe oryzae 70-15] gi|145010889|gb|EDJ95545.1| hypothetical protein MGG_04884 [Magnaporthe oryzae 70-15] Length = 521 Score = 72.7 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 31/245 (12%), Positives = 78/245 (31%), Gaps = 47/245 (19%) Query: 338 WFYFIAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK------ 390 + + + + + + + AI+ + +L+ + +V ++ Sbjct: 184 FGWGPSSMAQWGIEHLHVWGSMPWWAAILGYAIVTRLMLLKPSIDAFVQQRKLQALKKDP 243 Query: 391 -----NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + + + + +L + I+ P+ +Q+P+ +++ Sbjct: 244 RGKAAFDKMSQMMSGGSSSTTELLAARADVQRLQRAVGISTWKIALPM-IQMPIGIGVFR 302 Query: 446 VISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 V S ++ + W+ DL + DP I P+ + M Sbjct: 303 VTSACADLPVPSFETGGFMWLMDLTSPDPFY-------------------ILPLASAGMM 343 Query: 502 FIQ----MKMSPPPADKGQAMIL----NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++ MKMSP D Q + + + A L +Y+ S + Q Sbjct: 344 YVMLQHSMKMSP---DASQTAMFKAVQYVLTPISFLVSLKLNAALQLYFIASAGLQAAQT 400 Query: 554 AVIMK 558 ++ + Sbjct: 401 LILSR 405 >gi|169854710|ref|XP_001834029.1| inner membrane protein OXA1L [Coprinopsis cinerea okayama7#130] gi|116504929|gb|EAU87824.1| inner membrane protein OXA1L [Coprinopsis cinerea okayama7#130] Length = 413 Score = 72.7 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 86/228 (37%), Gaps = 38/228 (16%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-------PPQVLQ 412 + I+ + + + P A ++ ++ QP+I + RE+ + Q Sbjct: 144 WFYTIIAGSALWRFVCVPFALSNIRNSTKLRPFQPQILQARERMTAAQTKRDAIELQRAS 203 Query: 413 KAMIQLYKTHNINPLAGC-WPILLQIPV----FFAIYKVISISLE------------MRH 455 M ++Y ++P G P+ Q+P+ FFA+ ++ + +E + Sbjct: 204 VEMKKVYSEAGVSPFTGMILPMFAQLPITIGMFFALKRMAQLPVEQMKESGVAINLDLPW 263 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 W+ DL ADPT + F + I + +P Sbjct: 264 TGPISWLSDLTVADPTYLL---------PAAFCGLINLQIAVGAREMDTS--NPSAGHLM 312 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + + V+ ++ +SSFP GL + ++ ++IVQ ++ + G Sbjct: 313 --NVFRGLSVLTIYFMSSFPQGLFLGLLTTSGLTIVQSLLL-RSDGVR 357 >gi|256787512|ref|ZP_05525943.1| membrane protein [Streptomyces lividans TK24] gi|289771409|ref|ZP_06530787.1| membrane protein [Streptomyces lividans TK24] gi|289701608|gb|EFD69037.1| membrane protein [Streptomyces lividans TK24] Length = 237 Score = 72.7 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 17/211 (8%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T V+LL PL++ +QP+I ELR K ++P + LQ+A+++L+ Sbjct: 28 IILFTALVRLLVHPLSRAAARGQKARTRLQPRIAELRRKHAKNPEK-LQRAVLELHAEEK 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF-GILPF 482 ++PL+GC P L QIP FF +Y + S S A + LAA F Sbjct: 87 VSPLSGCLPSLCQIPAFFLLYHLFSSSTIGGEANGLLSHQLLAAPLGGRWADAFGDGGLL 146 Query: 483 YLPGFMHVGIWPIIMSLSMFIQ--MKMSP------PPAD----KGQAMILNWMPVVFVFA 530 G ++V ++ ++ ++ F + + P D G + MP + F Sbjct: 147 GGAGLVYVALFAVVAGVATFSYRLTRRTMADRPVLPAGDAGAVPGVGALTRVMPFMSFFT 206 Query: 531 LSS---FPAGLIIYWSWSNVISIVQQAVIMK 558 L + P +Y S S V++AV+ + Sbjct: 207 LVTVAVVPLAAALYVVTSTTWSAVERAVLYR 237 >gi|160893416|ref|ZP_02074201.1| hypothetical protein CLOL250_00965 [Clostridium sp. L2-50] gi|156864811|gb|EDO58242.1| hypothetical protein CLOL250_00965 [Clostridium sp. L2-50] Length = 465 Score = 72.7 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 12/86 (13%) Query: 489 HVGIWPIIMSLSMFIQMKMSP------------PPADKGQAMILNWMPVVFVFALSSFPA 536 I PI+ ++ F+ K+S A+ M+ MP++ +F + P Sbjct: 273 AALIVPILSAVLQFVSSKISMSASNTNSNDPTAAQANSMMNMMTYGMPLMSLFICINLPI 332 Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGA 562 + +YW +VI+I+ Q +I + Sbjct: 333 AIGLYWIIGSVITIITQLIINNYYKK 358 Score = 55.8 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 4/115 (3%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 F + K + ++ + N I ++L T F++ FPL KQ S+ M IQP+I++ Sbjct: 22 FDLMYKLIELISNSMGIGYVNLSICVILFTFFIRACLFPLNFKQQKSSKIMSFIQPEINK 81 Query: 399 LREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +K+ Q Q+ ++ K + ++ +GC P L+Q+PVF+ +Y+VI Sbjct: 82 ATKKYNNKTDQESLMKKQQETQKIQKKYGVSLTSGCLPTLIQLPVFYGLYRVIQN 136 >gi|227834243|ref|YP_002835950.1| putative preprotein translocase subunit [Corynebacterium aurimucosum ATCC 700975] gi|227455259|gb|ACP34012.1| putative preprotein translocase subunit [Corynebacterium aurimucosum ATCC 700975] Length = 342 Score = 72.7 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 101/277 (36%), Gaps = 37/277 (13%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVST 386 + P+ +M ++ L + + + I+ + V+ + PL Sbjct: 11 KEKAMISIFMYPVSGIMKLWHLLFSSFLDGSMAWILTIVFLVLTVRGIIAPLNWLSVKQG 70 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 I+P++ +L E+ Q+ +L K NP GC+PI L P F Sbjct: 71 RIGALIRPEMTKLEEQLNQADSVEEAVTILTQQRELNKRFQHNPAVGCFPIFLITPAFIG 130 Query: 443 IYKVISISLEMRHAPF-WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 +Y+V+ + P + D+++ + + FG+ H I P++++ + Sbjct: 131 LYQVVLRVSGSTNEPVGMLTLDDVSSFRNSTV---FGVPLTDFAREHHDLILPMLLAALV 187 Query: 502 FIQ---------MKMSPPPADKGQAMILNWMPVV---FVFALSSF------PAGLIIYWS 543 F ++ K +L +M ++ + L S P +I YW Sbjct: 188 FTSLNTLITLYRSYLTTRFDQKIPRRLLWFMALMVILIPWMLWSVAWNGPIPVTIIFYWG 247 Query: 544 WSNVISIVQQ----AVIMKMHGAEIGLIDRLRSTFSK 576 + + +++Q ++ + + + + R + + Sbjct: 248 CTYLFTLLQTLVYEFILRRRYPLPEAVHELRRESIRR 284 >gi|296817105|ref|XP_002848889.1| inner membrane protein OXA1 [Arthroderma otae CBS 113480] gi|238839342|gb|EEQ29004.1| inner membrane protein OXA1 [Arthroderma otae CBS 113480] Length = 478 Score = 72.3 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 38/322 (11%), Positives = 105/322 (32%), Gaps = 46/322 (14%) Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTI 318 + S I +T+ + S G ++ +F++ T + ++ Sbjct: 39 FRSRLIGQNDTALSAVRPARSSGPLKFSPRFASTTATTSASTPVVENATSATDTLSGGSL 98 Query: 319 HHYEKDLAIPRFEMLIDW--GWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLF 375 + + L + + + + + L+ + G + V ++ Sbjct: 99 TDIDLSRIPEKIGYLKELGLDYGWGPSAMVEFLLETLHITAGLPWWGATVAAAVLIRAAL 158 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLA 428 F + + I+P +RE+ + + ++ + L + + + P Sbjct: 159 FKSILSASEISGKLHKIKPLATPIRERMLKCARESDNVGALKAKQELALLNEKYGVKPWK 218 Query: 429 GCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 L+Q+P+ F ++V+ + + W+ + +DP Sbjct: 219 SFV-PLIQVPLGFGCFRVLRGMSALPVPGLDSESVLWLPTVTMSDPYF------------ 265 Query: 485 PGFMHVGIWPIIMSLSMFI---------QMKMSPPPADKGQAMILNWMPVVFVFALSSFP 535 + P+ S M++ ++ M+L +P + + +S +P Sbjct: 266 -------VLPVATSAMMYLALKRGGDAGTSNLNNT---PLGRMMLYGLPGITMATMSFWP 315 Query: 536 AGLIIYWSWSNVISIVQQAVIM 557 L +Y+ + +S+ Q ++ Sbjct: 316 GILQLYFLTTGFLSMCQAYLVT 337 >gi|149249002|ref|XP_001528841.1| hypothetical protein LELG_05767 [Lodderomyces elongisporus NRRL YB-4239] gi|146453330|gb|EDK47586.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 397 Score = 72.3 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 99/292 (33%), Gaps = 27/292 (9%) Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKD 324 PS + L + S + S ++ L + + + Sbjct: 33 PSMGLKATAFMTSLRFNSTANTSNPSTAILPTDAASSSEISDKLVSFSDLADKVPVTSLH 92 Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQY 383 + I G + + L+ + G I + TV ++++ FPL + Sbjct: 93 SDQLGYLKSIGMGQGWGPTAIIENLLEICHVYTGLPWWGTIAVVTVGIRVVLFPLYVRAS 152 Query: 384 VSTANMKNIQPKIDELREKFKQSP------PQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 + M ++P++D++ ++ K+ L + +L K + I+ +A ++Q+ Sbjct: 153 ANATKMSKVKPQLDQIMKEIKEDDSDSVQNKMKLLEKRKRLLKENGISTMAS-LAPIVQL 211 Query: 438 PV----FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 P F A+ K+ + +E W ++L+A DP + + Sbjct: 212 PFAYGFFQALRKMANHPVEGFEDQGIWWFENLSAVDPYVGLQAIAAVAVIVVVR------ 265 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 M I+ +P+ + SF A +++Y++ + Sbjct: 266 ---MGGET------GQHALAANMKKIMTIVPLASILITKSFSAAVVLYFAIN 308 >gi|240277666|gb|EER41174.1| mitochondrial Oxa1p [Ajellomyces capsulatus H143] Length = 499 Score = 72.3 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 109/308 (35%), Gaps = 42/308 (13%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 F+S A + + P S + L + A + Sbjct: 71 PSSARFNSTATTPIPPSD-PAASVPVDSVLDAPISSGAQSIDLLSAADLANV--DISQIP 127 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI-MLTTVFVKLLFFPLAKKQYV 384 + + + + ++ + ++ F+ G + T VF+++L A Sbjct: 128 EKLGYLKAVGLDYGWGPSRVIETILESFHIYGGLPWWGAAIGTAVFLRILVLKFAMDASD 187 Query: 385 STANMKNIQPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 ++A + +++ L+E+ ++ Q Q+ + +THNI L + L+Q+ Sbjct: 188 TSAKVASVKHLTQPLQEEVQRCYRENDTVGMQRAQQERKIINETHNIKLLKLAF-PLVQV 246 Query: 438 PVFFAIYKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 P+ F ++V+ + + + W+ ++ DP I Sbjct: 247 PLSFGAFRVLRGMSALPVPGLDSESFLWLHNVTLHDPYF-------------------IL 287 Query: 494 PIIMSLSMFIQMKM---SPPPADKGQAM---ILNW-MPVVFVFALSSFPAGLIIYWSWSN 546 PI + M K+ + D M I+ + +PV+ S P L ++++ ++ Sbjct: 288 PIATGVVMHYTFKLGGETAGANDPTTMMAKPIMLYGLPVLSAICTSFLPGILQMFFATTS 347 Query: 547 VISIVQQA 554 V++I Q Sbjct: 348 VLAIGQSY 355 >gi|327301651|ref|XP_003235518.1| hypothetical protein TERG_04572 [Trichophyton rubrum CBS 118892] gi|326462870|gb|EGD88323.1| hypothetical protein TERG_04572 [Trichophyton rubrum CBS 118892] Length = 484 Score = 72.3 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 85/244 (34%), Gaps = 38/244 (15%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + + + + L+ + G + T V ++++ F + +K Sbjct: 123 KELGLDYGWGPSSMVQFLLETLHITGGLPWWTATVATAVLIRVVLFNSIVSSAEVSTKLK 182 Query: 391 NIQPKIDELREKFKQSPPQ-------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 ++P+ +RE+ + + + L + H I P LLQIP+ F Sbjct: 183 ALKPRTTPIRERMMHCVRENDNVGALKAKNELALLNQEHGIKPWKAFL-PLLQIPLGFGC 241 Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 ++V+ + W++++ DP PI Sbjct: 242 FRVLRGMSTLPVPGLDNESVLWLQNVTMPDPYF-------------------AIPIATGA 282 Query: 500 SMFIQMK------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M++ + +S K +++ P V F ++ +P L +Y+ + +S+ Q Sbjct: 283 LMYVAFRRGGDTGLSNLMNSKLGKVVVYSFPFVTAFTMAFWPGILQLYFLTTGALSVCQT 342 Query: 554 AVIM 557 ++ Sbjct: 343 YIMT 346 >gi|320168751|gb|EFW45650.1| hypothetical protein CAOG_03634 [Capsaspora owczarzaki ATCC 30864] Length = 535 Score = 72.3 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 75/213 (35%), Gaps = 20/213 (9%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR--------EKFKQSPPQ 409 + + + + V +L+ P+ TA M + + E R K Q Sbjct: 199 MPWWVTLAVGGVLSRLVLLPIVINSQRMTALMAQHKEALGEFRRRMDVARAAKAPQITIL 258 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS----ISLEMRHAPFWGWIKDL 465 + + K + I P +L VFF ++ I LE W+ L Sbjct: 259 AIYREQQDYQKLYGIKPGRTLLGVLAMALVFFGCWRSIYSLLTEPLESMVTGGPSWMPRL 318 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ--AMILNWM 523 DPT+IF Y+ ++ + S + ++ +P + ++ +M Sbjct: 319 TMEDPTHIFPFVSAALVYISLKASATLF--VSSSTGWVYNLENPMAGQQVMFPKQMIRFM 376 Query: 524 ----PVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P+V + PAGL+ Y + V ++Q Sbjct: 377 VNGLPLVALPFTLFMPAGLLFYLIPTQVYGLLQ 409 >gi|315653630|ref|ZP_07906550.1| membrane protein OxaA [Lactobacillus iners ATCC 55195] gi|315488992|gb|EFU78634.1| membrane protein OxaA [Lactobacillus iners ATCC 55195] Length = 319 Score = 72.3 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 G + +I + V N G AI++ T ++L+ PL Sbjct: 35 VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94 Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 + Q + + K + L + +++YK +N++ + GC P+L+Q+P+ Sbjct: 95 QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + A F G + P + + I+ Sbjct: 155 IGIYQAVAYSKTLASASFMG-------------------ISLSKPSIVFAVVAAILY--- 192 Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 IQ +S + Q + P++ + + L +Y+ ++ ++QQ + Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + + +KN + Sbjct: 252 TFILM--PKVRADVDKELTKNPIKE 274 >gi|213400727|gb|ACJ47012.1| hypothetical protein [Wolbachia endosymbiont of Cordylochernes scorpioides] Length = 171 Score = 72.3 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 63/164 (38%), Positives = 94/164 (57%), Gaps = 2/164 (1%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282 D L E Y DI K + S +W G +DKYW + IP K + K+ + + Sbjct: 8 FDNKLEEWTYKDIAKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNDI 67 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 ++QA F ILPG S++ N+ FAGAK+ + HY+ L IP F+ +D+G YFI Sbjct: 68 DKFQADFVKPYKNILPGASVSNVNYFFAGAKKLNLLDHYKSALNIPLFDKAVDFGVLYFI 127 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + Y+S Sbjct: 128 TKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYISI 171 >gi|240047829|ref|YP_002961217.1| putative inner membrane protein translocase component YidC [Mycoplasma conjunctivae HRC/581] gi|239985401|emb|CAT05414.1| Membrane protein oxaA [Mycoplasma conjunctivae] Length = 607 Score = 72.3 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 74/561 (13%), Positives = 161/561 (28%), Gaps = 47/561 (8%) Query: 37 RKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 + + + R + V N + G + +L+ Sbjct: 72 QNDKTVIPNYTIFKKDETNPNALVRTTTKGNNFLVSADNNKID------GQTILE-SLKK 124 Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIE-LPNSNTVWNLISGKILTPTTP 155 + S S S NN S + P Sbjct: 125 QSENNGSKSTYFGDFSSLIIFENEKGFEYLRGDKNNEFLFFTSADKQYIQKNNWTPIFIP 184 Query: 156 IKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 + F R + ++ N + ++ P Sbjct: 185 SPKFLVLIKDEKFVREGLF--YTQTELTSDNKNVLQVRNIDKFFYKLDNKLPPVYRPYST 242 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 + +K L ++ D + ++ N E+ + + TS+ + Sbjct: 243 FARDVFQSIYNKILTLDQFKDGKLEALINKFEAVKGVDFDANDF------KTLTSYANTI 296 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 K L + + N T + + I + + F + Sbjct: 297 KQLLPTTNFTKFDIANNTYTYNLDEHAKPQTIAYQNKDASRPIVTWGDSWKLGPFYSIFV 356 Query: 336 WGWFYFIAKPM--FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + I L + + +A+++ T + +F ++ + Sbjct: 357 YPLSKIILSISESQSLSQWNGWITVLAIVAVVVLTKTLSFIFRFKTIFGQSKQLELQAKK 416 Query: 394 PKIDELREKFKQSP--PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 KID E ++++ Q ++ + +LYK +N +P A +L+ P+F A+++V+ Sbjct: 417 AKIDAKYEAYQKNKVMQQRQRQEIAELYKKNNFSPFAPFSQVLVTTPIFIAVWRVLQGIP 476 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM----KM 507 ++ + +L+A T+ LF YLP I++ ++ +Q + Sbjct: 477 SLK--VTFFLGLELSA---TSYQQLFAGQWIYLPIL-------ILVVVTQALQQLVPKWL 524 Query: 508 SPPPAD-----------KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + + K Q + +VF+F F A L IYW + + Q I Sbjct: 525 NKKKTNRIINASESEAMKKQLKTQRIITIVFIFFGVVFQASLQIYWIIGGIWEVAQSLGI 584 Query: 557 MKMHGAEIGLIDRLRSTFSKN 577 + ++ K Sbjct: 585 FYLQKSKFYRDKMQPFLRKKK 605 >gi|225557121|gb|EEH05408.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 499 Score = 72.3 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 95/242 (39%), Gaps = 39/242 (16%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI-MLTTVFVKLLFFPLAKKQYVSTANMK 390 + + + ++ + ++ F+ G + T VF+++L A ++A + Sbjct: 134 KAVGLDYGWGPSRVIETILESFHIYGGLPWWGAAIGTAVFLRVLVLKFAMDASDTSAKVA 193 Query: 391 NIQPKIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +++ L+E+ ++ Q Q+ + +THNI L + L+Q+P+ F Sbjct: 194 SVKHLTQPLQEEVQRCYRENDTVGMQRAQQERKIINETHNIKLLKLAF-PLVQVPLSFGA 252 Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 ++V+ + + + W+ ++ DP I PI + Sbjct: 253 FRVLRGMSALPVPGLDSESFLWLHNVTLHDPYF-------------------ILPIATGI 293 Query: 500 SMFIQMKM---SPPPADKGQAM---ILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M K+ + D M I+ + +PV+ S P L ++++ ++V++I Q Sbjct: 294 VMHYTFKLGGETAGANDPTTMMAKPIMLYGLPVLSAICTSFLPGILQMFFATTSVLAIGQ 353 Query: 553 QA 554 Sbjct: 354 SY 355 >gi|213965316|ref|ZP_03393512.1| putative inner membrane protein translocase component YidC [Corynebacterium amycolatum SK46] gi|213951932|gb|EEB63318.1| putative inner membrane protein translocase component YidC [Corynebacterium amycolatum SK46] Length = 452 Score = 71.9 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 99/283 (34%), Gaps = 41/283 (14%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E + F A + + + ++ +++ L V+ LA +Q++S Sbjct: 4 LEPFVWLVSFVLKAWHLLLASVFHLPSSLSWTLSLFLLVFTVRGALAFLAFQQFISARKT 63 Query: 390 KNIQPKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 N++P++ L+E++++ + PQ A ++ K I P+ +QIPV + + Sbjct: 64 ANLRPQLFMLKERYRRSIEPNSPQYANFASKEMRKAEGIKTSVMLAPLFVQIPVIMGLVR 123 Query: 446 VISISLEMRHAP-----------------FWGWIKDLAAADPTNI------FTLFGILPF 482 ++ L P + L P + +FG Sbjct: 124 MLRHMLRASEGPGLPASHNVGFISKDEISDFLSATFLGQPLPAYLRMDPEQLQIFGGNHD 183 Query: 483 YLPGFMHVGIWP--IIMSLSMFIQMKMSPPPADKGQA------MILNWM----PVVFVF- 529 L F +GI I ++ I + D + + M P++ +F Sbjct: 184 SLLTFCIIGIVAAAIFTGFNLVISYRRLQRTLDYSNSVSVFLSKFMRVMLIYAPLMILFA 243 Query: 530 -ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLR 571 P LI+YW +N ++ Q ++ + L D R Sbjct: 244 GFFGPTPVALIVYWVTNNFWTLTQNIILTRYVEKTYPLTDDFR 286 >gi|330685212|gb|EGG96875.1| membrane protein insertase, YidC/Oxa1 family [Staphylococcus epidermidis VCU121] Length = 270 Score = 71.9 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 32/237 (13%) Query: 338 WFYFIAKPMFMLMSYFYN-LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN----I 392 ++ +PM L+ F N+G+AI+ + V+ + P Q + M+ + Sbjct: 30 FYNTFVQPMDRLLHLFGRLFNYNYGLAIIAIVLIVRFILLPFMLIQVKNMHIMREKTKVV 89 Query: 393 QPKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYK 445 QP+ID++REK K++ Q + +++ YK + INP GC+P+++QIP+ +Y Sbjct: 90 QPQIDKIREKIKEADSQEERNAANQLLMKKYKQYGINPFKNIIGCFPVIIQIPILMGLYM 149 Query: 446 VI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + S + P + W +L + L + I P++ S+ Sbjct: 150 SLKYPSSDGITKYPHFLWF-NLTEP----------NIMMTLIAALMYLIQPLVNSIHY-- 196 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 P K +++ P+ +A + L +YWS S I+Q + + Sbjct: 197 -----PKNERKTYYVMMILSPIFITYASLHSASALGLYWSLSAAFLIIQMHFAHRHY 248 >gi|213400709|gb|ACJ47003.1| hypothetical protein [Wolbachia endosymbiont of Nasonia longicornis] Length = 171 Score = 71.9 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 2/164 (1%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282 D L E Y DI K + S +W G +DKYW + IP K + K+ + + Sbjct: 8 FDNKLEEWTYKDISKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNT 67 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 ++Q F +ILPG S++ N+ FAGAK+ + Y+ L IP F+ +D+G YFI Sbjct: 68 DKFQVDFVKPYKSILPGASVSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFI 127 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 KP+F+L+ YF ++ NFG+AI+L T+ +KLL L + Y+S Sbjct: 128 TKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLSLFNRSYISM 171 >gi|156847305|ref|XP_001646537.1| hypothetical protein Kpol_1055p34 [Vanderwaltozyma polyspora DSM 70294] gi|156117215|gb|EDO18679.1| hypothetical protein Kpol_1055p34 [Vanderwaltozyma polyspora DSM 70294] Length = 391 Score = 71.9 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 91/307 (29%), Gaps = 35/307 (11%) Query: 267 KETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLA 326 F S S A + + + + + + Y + Sbjct: 38 NGIRFKSTTSPSSGVDAANEIQTQLPSFDEIASNAGAISEQVSQAVNMTSDQIGYMNSIG 97 Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVS 385 + + + + + Y + G I T+ V+L FPL K + Sbjct: 98 L--------AQSWTWPPDLIQHFLEYIHVYTGLPWWGTICAATLLVRLAMFPLYVKSSDT 149 Query: 386 TANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLA---GCWPILLQIP 438 A I+P++D + + + Q + +L + I + + + Sbjct: 150 IARNSRIKPELDIVTKDLMSAGTLLESQTIALKRKKLLADNGIQTRWLAAPMLQLPVALG 209 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII-- 496 F I + + ++ W DL ADP F+ G+ Sbjct: 210 FFSGIRAMANYPVDGFTTQGLSWFTDLTQADPY-----------LGLQFITAGVLMTFTR 258 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + Q +P++ + A + AG+++Y++ + S++Q ++ Sbjct: 259 LGGETGAQQF------SPAMKKFFTILPLISIPATMNLSAGVVLYFAVNGTFSVMQTVLL 312 Query: 557 MKMHGAE 563 + Sbjct: 313 RNKTVRK 319 >gi|309356301|emb|CAP37412.2| hypothetical protein CBG_20396 [Caenorhabditis briggsae AF16] Length = 301 Score = 71.9 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 79/240 (32%), Gaps = 38/240 (15%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQYVSTANM 389 G + + + + I+ TT+ ++ L + A Sbjct: 11 WRSSGSGRGGIPSSYFRWALESMHMHLDIPWWLTIVATTITLRALLIGVPVMSQKLVAKQ 70 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMI-------QLYKTHNINPLAGCWPILLQIPVF-- 440 + +++E R++ ++ + Q ++ +I + VF Sbjct: 71 SMYRKEMNEFRDRIDEARKENNQLLQQQILLEQRDFLRSKDIRLGRQFMVMAANGAVFAT 130 Query: 441 --FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 FAI K+++++ W DL A DP P I + Sbjct: 131 QFFAIKKMVAVNYPGLSEGGALWFTDLTATDPYY-------------------ALPFISA 171 Query: 499 LSMFIQMKM------SPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSWSNVISIV 551 +M + K+ + +++ +PVV S F GL +YW+ SN +S++ Sbjct: 172 ATMALVTKVGIEMGTTADQMPPVMRAFMSYGLPVVIFGVSSQFATGLCVYWTASNAVSLI 231 >gi|302551683|ref|ZP_07304025.1| membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302469301|gb|EFL32394.1| membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 250 Score = 71.9 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 16/210 (7%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T V+LL PL++ +QPKI ELR+K ++P + LQ+A+++L+ Sbjct: 42 IVLFTALVRLLVHPLSRAAARGQKARTALQPKIAELRKKHGKNPEK-LQRAVLELHAEEK 100 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 ++PLAGC P LLQ+P FF +Y + S + LAA PF Sbjct: 101 VSPLAGCLPGLLQVPAFFLLYHLFSSDTIGGETNELLGHQLLAAPLGGRWADALQAGPFG 160 Query: 484 LPGFMHVGIWPIIMSLSM--FIQMKMSPPPADKGQ-----AM-----ILNWMPVVFVFAL 531 G ++ G++ ++ +++ + K Q M + MP + F L Sbjct: 161 GAGLVYAGLFVVVACVAVFSYRLSKRMMAANPAVQVSGGEQMPGVGAVTKVMPFMSFFTL 220 Query: 532 SS---FPAGLIIYWSWSNVISIVQQAVIMK 558 + P +Y S S+V++A + + Sbjct: 221 ITVAVVPLAAALYVVTSTTWSVVERAALYR 250 >gi|152967884|ref|YP_001363668.1| hypothetical protein Krad_3941 [Kineococcus radiotolerans SRS30216] gi|151362401|gb|ABS05404.1| 60 kDa inner membrane insertion protein [Kineococcus radiotolerans SRS30216] Length = 233 Score = 71.9 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 90/230 (39%), Gaps = 33/230 (14%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 + ++ + +++ + +A++ V + L PL Q + ++P++ ++++++ Sbjct: 20 VAQVLVHLHDVGAPWPLAVLGLVVLARTLLLPLFVAQQRAVLRAAALRPRVLAVQDRYRG 79 Query: 406 SP----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI--------SISLEM 453 + LQ+ + L++ +NPL GC P LLQ PVF A+ + S + Sbjct: 80 RTDPASRRALQQEVAALHRQAGVNPLGGCLPGLLQAPVFLALTLTLQSGDTLTAFGSATL 139 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 AP G + A P + + L + + S P P Sbjct: 140 AGAPLSGVLTH--APGPATLLVGILL----LLLTAATQVVTVRAGTSGV------PAPTA 187 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ----AVIMKM 559 + V FP G+++YW+ S V S QQ V+++ Sbjct: 188 LLVVLPALV-----VVPAVHFPIGVLLYWAASGVWSAGQQLVARWVVLRR 232 >gi|83319450|ref|YP_424810.1| putative inner membrane protein translocase component YidC [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|1176889|sp|P43042|OXAA_MYCCT RecName: Full=Membrane protein oxaA gi|416240|dbj|BAA03620.1| orf R3 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283336|gb|ABC01268.1| membrane protein oxaA [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 388 Score = 71.9 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 90/222 (40%), Gaps = 16/222 (7%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-- 413 + AI LTT+ +K + K ++ M++IQ K+ +++ K+K ++ Sbjct: 152 YGISSIFAIFLTTLLIKGITLSFGWKSQINQEKMQDIQLKVADIQAKYKDKKDMQSKQKQ 211 Query: 414 --AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + LYK N++ + +P FAIY ++ + ++ A +A + Sbjct: 212 QLEIQALYKKENMSQFSALAGSFAPLPFLFAIYAIVRSTRALKIASVG----PIALIEGP 267 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAM------ILNW-M 523 G + + +++ + + M L +QMK + Q I+ M Sbjct: 268 WQQITAGNYIYIIILAIYLPLQAVSMLLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVM 327 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 VF+ + S G+ IYW +S+++ I+Q + + Sbjct: 328 MFVFIIIIVSVATGVCIYWIFSSILQIIQTYAFYLYNEKKRK 369 >gi|317057908|ref|YP_004106375.1| membrane protein insertase, YidC/Oxa1 family [Ruminococcus albus 7] gi|315450177|gb|ADU23741.1| membrane protein insertase, YidC/Oxa1 family [Ruminococcus albus 7] Length = 465 Score = 71.9 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Query: 499 LSMFIQMKMSPPPADKG--QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 +S + K +P A ++ MP+ ++ +P GL IYW +S++ SI+Q +I Sbjct: 292 ISQYYTKKNNPSAAKMTGSNNAVMYIMPLFSLWITFKYPIGLGIYWCFSSLFSIIQ-MII 350 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNS 580 +K + + + +K S Sbjct: 351 LKKIYTPEHVAELVEKDMAKKKTS 374 Score = 59.2 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 43/114 (37%), Positives = 70/114 (61%), Gaps = 1/114 (0%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F IA P+ +M Y + N+GIA+++ T+ KL+ FPL+ KQ S A++ ++PK+D Sbjct: 1 MFDLIAIPLGWIMKGCYYVFKNYGIALLVFTLITKLIVFPLSVKQEKSMASIAMLKPKLD 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 EL +K+ ++ Q LQ+ + LY +NP+A C PIL+ + + FA+ VI L Sbjct: 61 ELEKKYGKNK-QKLQEEQMALYSETGVNPMASCLPILVMMLILFAMIPVIYGPL 113 >gi|38372430|sp|O13375|OXA1_SACSE RecName: Full=Mitochondrial inner membrane protein OXA1; AltName: Full=Cytochrome oxidase biogenesis protein OXA1; AltName: Full=Oxidase assembly protein 1; Flags: Precursor gi|2583063|gb|AAB82601.1| Oxa1p [Saccharomyces servazzii] Length = 371 Score = 71.9 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 89/260 (34%), Gaps = 36/260 (13%) Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAKKQ 382 I + +++ A + + Y + G I T+ V+LL FP+ K Sbjct: 67 STHIGYLNSIGLAQTWHWPADIIQHALEYVHVYTGLPWWGTICTVTILVRLLMFPIYVKS 126 Query: 383 YVSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 + A I+P++D++ ++ + Q + +L + I +LQ+P Sbjct: 127 SDTIAKNSRIKPQMDKVTKELMATTDLAEGQKIAVRRRKLLSENGIKNRW-LAAPMLQLP 185 Query: 439 VFFAIYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 + + + ++ W DL +DP Sbjct: 186 IAIGFFNALRSMANFPVDGFANQGILWFHDLTLSDPYLGLQFITA--------------A 231 Query: 495 IIMSLS-----MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 ++MS S Q P +P+V + A + +++Y++ + S Sbjct: 232 VLMSFSRLGGETGAQQFSGP------MKRFFIILPLVSIPATMNLSTSVVLYFAINGTFS 285 Query: 550 IVQQAVI-MKMHGAEIGLID 568 ++Q V+ K ++ + + Sbjct: 286 VLQTLVLRNKWFRKKLNIAE 305 >gi|295398616|ref|ZP_06808646.1| membrane protein [Aerococcus viridans ATCC 11563] gi|294973139|gb|EFG48936.1| membrane protein [Aerococcus viridans ATCC 11563] Length = 308 Score = 71.6 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 86/246 (34%), Gaps = 29/246 (11%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 +++ + N I + + + L K M QP + E+ Sbjct: 43 PIGQLIVWIADQFAGNYGIAIIIITIAIRIILLPLTLNQLKGSTRQQIKMAAFQPYLKEI 102 Query: 400 REKFKQSPPQVLQK----AMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEM 453 +E+ K + Q + + + +N++ GC P+LLQ+P+ +Y I +S Sbjct: 103 QERQKNATTQEEKMALATEQQEFMRENNVSMFGGMGCLPLLLQLPIISGLYTAIRVS--- 159 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 +P FGI M + I I+M L P Sbjct: 160 ---------------EPIANSEFFGIS--LGESHMVLAIITIVMYLIQSFITLQGVPEEQ 202 Query: 514 KGQAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRS 572 K Q +M P++ F + + PAGL +Y+ + SI+Q + + + Sbjct: 203 KAQMRSTLFMTPIMMGFIVFTTPAGLTLYFLAGAIWSILQSLFTTFYF--KPRIQAEVDK 260 Query: 573 TFSKNY 578 ++N Sbjct: 261 EMAENP 266 >gi|15828623|ref|NP_325983.1| putative inner membrane protein translocase component YidC [Mycoplasma pulmonis UAB CTIP] gi|14089565|emb|CAC13325.1| conserved hypothetical protein [Mycoplasma pulmonis] Length = 608 Score = 71.6 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 71/485 (14%), Positives = 145/485 (29%), Gaps = 41/485 (8%) Query: 97 YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPI 156 Y SSNS + L N Y + + + + ++ + P Sbjct: 120 YGKTKSSNSALAILED-----NTYIDSDGQENKSIIYKDNSGKYLFFNDTLTTYDPINKF 174 Query: 157 KLVFKNANNILFERT-ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFG 215 ++ + I E+ I + ++ + Sbjct: 175 TDIYAIGRLTERDSDAIKFRENNPKIIEHLKLFKVSEVPISREYQPNIKFARDFLQALYD 234 Query: 216 VQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQF 275 KY+ + S + + + + + Sbjct: 235 KTLKLPVYQNILRADGSKYASFNEFLTSLEKRTT-------NHLKTQLNKQELSEEDLNS 287 Query: 276 KYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 LSD + + ++ T A +F ++ + +A + + Sbjct: 288 ITLSDSESAALNAYLTRVNPLISENGFTGLKKSLNNADDFELVYSQGEKIAQSDYGQIPV 347 Query: 336 WGWF-YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVF-----------VKLLFFPLAKKQY 383 W Y+ P + L+ N+ + + +L F L K Sbjct: 348 VTWGEYWNYGPFYALLVAPIASFTNWVASAFESGFGIVFAIIVVVVVTRLFIFGLTFKVT 407 Query: 384 VSTANMKNIQPKIDELREKFKQSPP-----QVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 S + +Q K ++ K+ Q QK + LYK HNI+P+ I P Sbjct: 408 FSQYKQQELQGKKAKIDAKYAAYENNKMMKQRKQKEIQDLYKKHNISPIDFVASIAWSSP 467 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 +F A+++VI ++ + + + A I + + + + V I I Sbjct: 468 LFIAVWRVIQSVPVIK--SNFFLGVNFSTASYQEILAKNWVYLWVVSLALIVQIISQI-- 523 Query: 499 LSMFIQMKMSPPPAD--KGQA-----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 L ++ K A+ + Q+ N M +VF+ + AG+ IYW + +I Sbjct: 524 LPRWLAKKKIKERANVYEMQSYKKNNKTQNIMLIVFMVFTITLQAGVQIYWIIGGLWTIG 583 Query: 552 QQAVI 556 Q + Sbjct: 584 QTLFV 588 >gi|172039795|ref|YP_001799508.1| putative preprotein translocase subunit [Corynebacterium urealyticum DSM 7109] gi|171851099|emb|CAQ04075.1| putative preprotein translocase subunit [Corynebacterium urealyticum DSM 7109] Length = 315 Score = 71.6 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 87/237 (36%), Gaps = 45/237 (18%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAM 415 + +A++ + V+ L PL +Q S+ N+ N++P++ +L +++ + L + Sbjct: 31 WIVAVIFLVLTVRSLLAPLTLRQIRSSRNLSNLRPQLYQLSQEYVGRTDAESRKELNQRR 90 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA---PFWGWIKDLAAADPTN 472 Q+ GC P L+QIPVF +Y+++ L+ D Sbjct: 91 KQMQLEGGYRMRDGCLPALIQIPVFVGLYRMLLRVARPNGVVDPDNLQGFGPLSDQDVYT 150 Query: 473 IFT--LFGILPFYLPGF--------------MHVGIWPIIMSLSM------FIQMKMSPP 510 +FG+ + P+++ S F ++ + Sbjct: 151 FMHARIFGVPLITYVQMPAQSLANLGTDQASVFRVALPMVLLASTFTATNLFFSIRRTKA 210 Query: 511 PADKGQA---------MILN----WMPVVFVFALSSFPAGLIIYWSWSNV--ISIVQ 552 D Q ++ +MP++F P + +YW +N+ ++I Q Sbjct: 211 TMDPDQGFSYFALGLLKVMLPIVFFMPILFGLLG-PLPVMVFVYWLTNNLCTLTITQ 266 >gi|255324011|ref|ZP_05365136.1| preprotein translocase YidC subunit [Corynebacterium tuberculostearicum SK141] gi|255298868|gb|EET78160.1| preprotein translocase YidC subunit [Corynebacterium tuberculostearicum SK141] Length = 325 Score = 71.6 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 109/289 (37%), Gaps = 66/289 (22%) Query: 338 WFYFIAKPMFMLMSYFYN---------LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ +++ + +AI+L T +K L Q S+ Sbjct: 1 MLNFIYWPISAVLWFWHWLLSLVMDPAWGITWILAIVLLTWTLKALMVKPTISQIRSSRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ IQPK+ E+R K+ + + M ++YK + P+AGC P+ +QIP+F ++ V+ Sbjct: 61 MQEIQPKVQEIRAKYGNDQTKA-AQEMQKVYKESGVRPMAGCLPVFVQIPMFVGLFHVLR 119 Query: 449 I-------------------SLE-MRHAPFWGWIKDLAAA-------DPTNIFTLFGILP 481 S+E + + + DL D + L P Sbjct: 120 SFDRTVAVAGGIGHPSGDPMSIEDNANTANYIFKPDLVQQFLDAKIFDVPLVTNLRLNSP 179 Query: 482 ------FYLPGFMHVGIWPIIMSLSMF-IQMKMSPP----PADKGQA------------- 517 + V + II ++ F +M ++ A K QA Sbjct: 180 IVEGVTTSQAAVIIVPMIAIIAVMTHFNARMSLNRQEKRRAAGKTQAPQGQNAEMMQQQM 239 Query: 518 -----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 M+L MP + VF+ S +P GL+ Y + V + Q ++ Sbjct: 240 AMMSKMMLWVMPAMLVFSGSIWPIGLLFYMMANTVWTFFQTRIVYAKMD 288 >gi|213400711|gb|ACJ47004.1| hypothetical protein [Wolbachia endosymbiont of Nasonia vitripennis] Length = 171 Score = 71.2 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 62/164 (37%), Positives = 93/164 (56%), Gaps = 2/164 (1%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282 D L E Y DI K + S +W G +DKYW + IP K + K+ + + Sbjct: 8 FDNKLEEWTYKDISKKHLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHTNANDI 67 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 ++Q F + +ILPG S + N+ FAGAK+ + Y+ L IP F+ +D+G YFI Sbjct: 68 DKFQVDFVKSYKSILPGASTSNVNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFI 127 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + YVS Sbjct: 128 TKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVSM 171 >gi|262183267|ref|ZP_06042688.1| putative preprotein translocase subunit [Corynebacterium aurimucosum ATCC 700975] Length = 328 Score = 71.2 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 100/273 (36%), Gaps = 37/273 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 P+ +M ++ L + + + I+ + V+ + PL Sbjct: 1 MISIFMYPVSGIMKLWHLLFSSFLDGSMAWILTIVFLVLTVRGIIAPLNWLSVKQGRIGA 60 Query: 391 NIQPKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 I+P++ +L E+ Q+ +L K NP GC+PI L P F +Y+V Sbjct: 61 LIRPEMTKLEEQLNQADSVEEAVTILTQQRELNKRFQHNPAVGCFPIFLITPAFIGLYQV 120 Query: 447 ISISLEMRHAPF-WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ- 504 + + P + D+++ T+FG+ H I P++++ +F Sbjct: 121 VLRVSGSTNEPVGMLTLDDVSS---FRNSTVFGVPLTDFAREHHDLILPMLLAALVFTSL 177 Query: 505 --------MKMSPPPADKGQAMILNWMPVV---FVFALSSF------PAGLIIYWSWSNV 547 ++ K +L +M ++ + L S P +I YW + + Sbjct: 178 NTLITLYRSYLTTRFDQKIPRRLLWFMALMVILIPWMLWSVAWNGPIPVTIIFYWGCTYL 237 Query: 548 ISIVQQ----AVIMKMHGAEIGLIDRLRSTFSK 576 +++Q ++ + + + + R + + Sbjct: 238 FTLLQTLVYEFILRRRYPLPEAVHELRRESIRR 270 >gi|256384304|gb|ACU78874.1| membrane protein OxaA [Mycoplasma mycoides subsp. capri str. GM12] gi|256385137|gb|ACU79706.1| membrane protein OxaA [Mycoplasma mycoides subsp. capri str. GM12] gi|296455637|gb|ADH21872.1| membrane protein OxaA [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 396 Score = 71.2 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 90/222 (40%), Gaps = 16/222 (7%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-- 413 + AI LTT+ +K + K ++ M++IQ KI +++ K+K ++ Sbjct: 160 YGISAIFAIFLTTLLIKGITLSFGWKSQINQEKMQDIQLKIADIQAKYKDKKDMQSKQKQ 219 Query: 414 --AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + LYK N++ + +P FAIY ++ + ++ A +A + Sbjct: 220 QLEIQALYKKENMSQFSALAGSFAPLPFLFAIYAIVRSTRALKIAAVG----PIALIEGP 275 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAM------ILNW-M 523 G + + +++ + + M L +QMK + Q I+ M Sbjct: 276 WQQITSGNYIYIIILAIYLPLQAVSMLLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVM 335 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 VF+ + S G+ IYW +S+V+ I+Q + + Sbjct: 336 MFVFIIIIVSVATGVCIYWIFSSVLQIIQTYAFYLYNEKKRK 377 >gi|42561574|ref|NP_976025.1| putative inner membrane protein translocase component YidC [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42493073|emb|CAE77667.1| Conserved hypothetical transmembrane protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320601|gb|ADK69244.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 396 Score = 71.2 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 90/222 (40%), Gaps = 16/222 (7%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-- 413 + AI LTT+ +K + K ++ M++IQ KI +++ K+K ++ Sbjct: 160 YGISAIFAIFLTTLLIKGITLSFGWKSQINQEKMQDIQLKIADIQAKYKDKKDMQSKQKQ 219 Query: 414 --AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + LYK N++ + +P FAIY ++ + ++ A +A + Sbjct: 220 QLEIQALYKKENMSQFSALAGSFAPLPFLFAIYAIVRSTRALKIAAVG----PIALIEGP 275 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAM------ILNW-M 523 G + + +++ + + M L +QMK + Q I+ M Sbjct: 276 WQQITSGNYIYIIILAIYLPLQAVSMLLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVM 335 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 VF+ + S G+ IYW +S+V+ I+Q + + Sbjct: 336 MFVFIIIIVSVATGVCIYWIFSSVLQIIQTYAFYLYNEKKRK 377 >gi|325678529|ref|ZP_08158140.1| putative stage III sporulation protein J [Ruminococcus albus 8] gi|324109748|gb|EGC03953.1| putative stage III sporulation protein J [Ruminococcus albus 8] Length = 466 Score = 71.2 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 56/134 (41%), Gaps = 4/134 (2%) Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 +S E++ L T + +P + ++ +S Q K + Sbjct: 244 VSGELKEFSEDFHYDFLGIYLGTTPSWKENKVSCLVPVLSFLLQL-LVTVVSQHFQKKNN 302 Query: 509 PPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 P A IL +MP+ ++ +P GL IYW +S++ S++Q ++ K++ E + Sbjct: 303 PDMAKMTGQNAFILYFMPLFSLWLTFKYPIGLGIYWCFSSLFSLIQTVILNKVYTPEY-V 361 Query: 567 IDRLRSTFSKNYNS 580 + ++ +K S Sbjct: 362 AELVQKDLAKQKAS 375 Score = 61.2 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 1/114 (0%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F IA P+ +M Y + N+GIA+++ T +L+ FPL Q S A ++PK+D Sbjct: 1 MFDLIAIPLGWIMKGCYYVFKNYGIALLVFTFLTRLIMFPLNVNQQKSMAKNTMLKPKLD 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 EL K+ ++ Q LQ+ + LY +NP+A C P+++ + + FA+ VI L Sbjct: 61 ELERKYGKNK-QKLQEEQMALYNETGVNPMASCLPMIVMMLILFAMIPVIYGPL 113 >gi|312875598|ref|ZP_07735599.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2053A-b] gi|311088852|gb|EFQ47295.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2053A-b] Length = 319 Score = 70.8 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 G + +I + V N G AI++ T ++L+ PL Sbjct: 35 VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94 Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 + Q + + K + L + +++YK +N++ + GC P+L+Q+P+ Sbjct: 95 QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + + F G + P + + I+ Sbjct: 155 IGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192 Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 IQ +S + Q + P++ + + L +Y+ ++ ++QQ + Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + + +KN + Sbjct: 252 TFILM--PKVRADVDKELTKNPIKE 274 >gi|213400717|gb|ACJ47007.1| hypothetical protein [Wolbachia endosymbiont of Tribolium confusum] Length = 171 Score = 70.8 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 62/164 (37%), Positives = 93/164 (56%), Gaps = 2/164 (1%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282 + L E Y DI K + S +W G +DKYW + IP K + K+ + + Sbjct: 8 FNNKLEEWTYKDISKKRLIKASTSEKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNI 67 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 ++QA F ILPG S +T N+ FAGAK+ + Y+ L IP F+ +D+G YFI Sbjct: 68 DKFQADFVRPYTHILPGTSASTLNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFI 127 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + Y+S Sbjct: 128 TKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYISM 171 >gi|329920138|ref|ZP_08276969.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners SPIN 1401G] gi|328936592|gb|EGG33036.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners SPIN 1401G] Length = 319 Score = 70.8 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 G + +I + V N G AI++ T ++L+ PL Sbjct: 35 VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94 Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 + Q + + K + L + +++YK +N++ + GC P+L+Q+P+ Sbjct: 95 QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + + F G + P + + I+ Sbjct: 155 IGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192 Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 IQ +S + Q + P++ + + L +Y+ ++ ++QQ + Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + + +KN + Sbjct: 252 TFILM--PKVRADVDKELTKNPIKE 274 >gi|320527122|ref|ZP_08028309.1| membrane protein insertase, YidC/Oxa1 family [Solobacterium moorei F0204] gi|320132450|gb|EFW24993.1| membrane protein insertase, YidC/Oxa1 family [Solobacterium moorei F0204] Length = 302 Score = 70.8 bits (171), Expect = 6e-10, Method: Composition-based stats. Identities = 36/277 (12%), Positives = 88/277 (31%), Gaps = 27/277 (9%) Query: 312 AKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV 371 A + F + + ++ + G I ++ + Sbjct: 32 ANGHIILISESTTFGEIFQTENWFSALFVWPLSWVLNKLAPVITVGGAIAIVTVVVNGLL 91 Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCW 431 + + + + Q+ + + QL + +N+NP + Sbjct: 92 AVFTLKSQMGMQRMQMLQPELNKIQRKYEGRDDQASKMRMAQEQQQLMRKYNVNPGSMML 151 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG 491 +Q+P+ A++ I A L FG+L + Sbjct: 152 VQFVQLPIIMAMFMAIQR------AEAVVNGTFLGMNLQVKPSEAFGLLFKGDLSGLPYI 205 Query: 492 IWPIIMSLSM--------FIQMKMS----------PPPADKGQAMILNWMPVVFVFALSS 533 I ++M+++ + Q K + P P + M+ +M V+ + Sbjct: 206 ILFLLMAVTQVVLVLLPIYFQKKKAAAEAAKHHRKPEPTNNQNIMMQMYMIVMVLAFGLM 265 Query: 534 FPAGLIIYWSWSNVISIVQQAV---IMKMHGAEIGLI 567 + +G+ ++W N++ I++ + IM+ + + GL Sbjct: 266 WQSGMSLFWFIRNIVDIIKTIIVQNIMEKNSQKEGLR 302 >gi|297199948|ref|ZP_06917345.1| membrane protein [Streptomyces sviceus ATCC 29083] gi|297147539|gb|EDY54451.2| membrane protein [Streptomyces sviceus ATCC 29083] Length = 237 Score = 70.8 bits (171), Expect = 6e-10, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 17/211 (8%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T FV+LL PL++ +QPKI ELR++ K P + LQKA++ L+ Sbjct: 28 IVLFTAFVRLLVHPLSRAAARGQKARTKLQPKIAELRKQHKDQPDK-LQKAVLALHAEEK 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG-ILPF 482 ++PL+GC P L Q+P FF +Y + S + A + AA G F Sbjct: 87 VSPLSGCLPGLFQLPAFFLLYHLFSNTTIGGKANELLSHQLFAAPLGGRWADALGDGGMF 146 Query: 483 YLPGFMHVGIWPIIMSLSMF---IQMKMS-----PPPAD----KGQAMILNWMPVVFVFA 530 G ++V ++ ++ ++ F +M P D G + MP + F Sbjct: 147 KGAGLVYVCLFAFVVVVATFNYRRTKRMMATNPVMPVTDGQPVPGAGAMTKLMPFMSFFT 206 Query: 531 LSS---FPAGLIIYWSWSNVISIVQQAVIMK 558 L + P +Y S+ + V++A + + Sbjct: 207 LFTVAVVPLAAALYVVTSSTWAAVERAALYR 237 >gi|318040384|ref|ZP_07972340.1| putative inner membrane protein translocase component YidC [Synechococcus sp. CB0101] Length = 378 Score = 70.8 bits (171), Expect = 6e-10, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKGQA 517 I LAA G + FY G ++ + I S+F+ +S PA+ QA Sbjct: 236 IPGLAARSGFLFIKALGQVGFYTDGAINWDIAILVAAFGASLFVSQILSGMGMPANPQQA 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 PV+ FP AG+++Y +N+ Q ++ + Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVVANIFQAAQTFLLTR 338 Score = 55.8 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 5/159 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + + + + Sbjct: 8 NLLLPILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67 Query: 404 ---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 + PQ Q+ + L K +PL+GC P+L+Q+P+ FA++ + S P+ Sbjct: 68 KAKYANNPQKQQEELGSLMKEFG-SPLSGCLPLLVQMPILFALFATLRGSP-FADVPYTL 125 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 +K L A + P + P+I SL Sbjct: 126 NLKVLPADQIAAVEPKPFNSPSHSIFVTATNHVPVIASL 164 >gi|50307981|ref|XP_453990.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643125|emb|CAG99077.1| KLLA0E00925p [Kluyveromyces lactis] Length = 387 Score = 70.8 bits (171), Expect = 6e-10, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 84/251 (33%), Gaps = 26/251 (10%) Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFFPLAK 380 + I + + + + +M + G I +TTV ++L FPL Sbjct: 84 DASNQIGYLSSIGMAKSWLWPPDLIQNVMEQIHFYAGLPWWATICVTTVLARVLLFPLYV 143 Query: 381 KQYVSTANMKNIQPKIDELREKFKQS----PPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 K + I+P++D++ Q + +L + I ++Q Sbjct: 144 KYSDTLGRTSKIKPEMDKVNADLMACSDTTKAQQIAMKRRKLLSENGIK-NRYLIVPVVQ 202 Query: 437 IPV----FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IP+ F +I ++ ++ W ++L ADP F Sbjct: 203 IPIAISFFTSIREMCLYPVDGLATQGIAWFQNLTLADPYLGLQCLTAAMFVALARKGGE- 261 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 F + ++P++ + + AG+++Y + + V S++Q Sbjct: 262 ----SGAQQF----------SPQMKKVFTYLPILTIPVTMNLSAGVVLYLAVNGVCSMIQ 307 Query: 553 QAVIMKMHGAE 563 ++ + A Sbjct: 308 TLLL-RNQTAR 317 >gi|332638886|ref|ZP_08417749.1| 60 kDa inner membrane protein [Weissella cibaria KACC 11862] Length = 314 Score = 70.8 bits (171), Expect = 6e-10, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 89/257 (34%), Gaps = 46/257 (17%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 + + + G +I++ T V+L+ P+ Q + Sbjct: 22 HADFLEGPLTSFMHMSEDWIGGTNAVGWSIVILTFVVRLILLPMMIHQQRGATIQQEKMR 81 Query: 395 KIDELREKFKQSPPQVLQKA--------MIQLYKTHNINPLAG--CWPILLQIPVFFAIY 444 + K +++ + M+ +Y+ + ++ L G +++Q PVF +Y Sbjct: 82 LLQPQMSKIQEAQKTAQTQEEKMLASQAMMAVYRENGVSMLGGMNFATLIIQWPVFMGLY 141 Query: 445 KVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 I S E+ HA F+G +L + P + I +++ +Q Sbjct: 142 AAIKNSHEIAHATFFG--INLGSQSP---------------------VLAIATAVAYGVQ 178 Query: 505 MKMSPPPADKGQAMILN-------WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 +S Q + M ++ + + G+ +Y+ ++ I+Q +I+ Sbjct: 179 AYLSLIGIPAEQKKQMQSMMLMMPIMMLIMTWVTNG---GIALYFFVGALVMIIQTLIII 235 Query: 558 KMHGAEIGLIDRLRSTF 574 L ++ TF Sbjct: 236 ---VWRPKLRAQVAETF 249 >gi|300780162|ref|ZP_07090018.1| preprotein translocase YidC subunit [Corynebacterium genitalium ATCC 33030] gi|300534272|gb|EFK55331.1| preprotein translocase YidC subunit [Corynebacterium genitalium ATCC 33030] Length = 387 Score = 70.8 bits (171), Expect = 6e-10, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 103/297 (34%), Gaps = 74/297 (24%) Query: 338 WFYFIAKPMFMLMSYFYNLV---------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ +++ + ++ +AI+ T +++ Q + Sbjct: 1 MLNFIYWPISAVLWFWHKIFGYIFSPDSGASWLLAIVFLTFTIRIFLVKPMVNQLRAGRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ +QP++ E+R K+K Q + ++YK +NPLA C L+Q+PVF ++ V+ Sbjct: 61 MQELQPQLQEIRAKYKN-DQQKMAMETQKVYKEAKMNPLASCIVPLVQLPVFIGLFHVLR 119 Query: 449 I-------------SLEM--RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 S+E A + +D+ + IF + +P Sbjct: 120 SFNRTGTGAGGLGMSIEQNRNTANYIFSPEDVQSFLDARIFGIPLSSYMSMPEEQFAAFA 179 Query: 494 P-------IIMSL-----------------SMFIQMK----------------------- 506 P IIM SM Q K Sbjct: 180 PVDFTRMNIIMVALPLVLICVVMTHLNARLSMSRQRKRMAKKKAEDELRGKKPSQDGPLS 239 Query: 507 --MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 M M+L ++P +F + GL+ Y +NV ++VQ ++ Sbjct: 240 PEMMETQMKTMNGMMLWFLPATLLFTGFLWHIGLLTYMVSNNVWTLVQTKLVFDKMD 296 >gi|86609684|ref|YP_478446.1| inner membrane protein translocase component YidC [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558226|gb|ABD03183.1| inner membrane protein OxaA [Synechococcus sp. JA-2-3B'a(2-13)] Length = 396 Score = 70.8 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 8/110 (7%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-----KGQAMILNWMPVVFVFALS 532 G + +I +S+++ ++ D Q+ + PV+F Sbjct: 260 GAFDEDGTIHWDIIAMIVIFGVSIYLNQYLTNAGQDTGKEDPSQSSMARITPVLFSAMFL 319 Query: 533 SFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 FP AG+++Y SN+ VQ ++ + L + + + Sbjct: 320 FFPLPAGVLLYILVSNIFQTVQTFLLSR-EPLPENLQQLVEEERRRAAQA 368 Score = 61.2 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 69/121 (57%), Gaps = 5/121 (4%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN-- 391 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + MK Sbjct: 1 MDFGVGFLSNNVMLPILDFFYGIVPSYGLAIIFLTLVIRFALYPLNVGSIRNMRRMKVIS 60 Query: 392 --IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +Q ++ EL+EK++ PQ L++A +LY NPL GC P+L+Q+PV FA++ + Sbjct: 61 PVMQRRMRELQEKYRD-DPQKLREAQAKLYSELGANPLGGCLPLLIQMPVLFALFATLRG 119 Query: 450 S 450 S Sbjct: 120 S 120 >gi|239612262|gb|EEQ89249.1| mitochondrial Oxa1p [Ajellomyces dermatitidis ER-3] gi|327353214|gb|EGE82071.1| mitochondrial Oxa1p [Ajellomyces dermatitidis ATCC 18188] Length = 498 Score = 70.4 bits (170), Expect = 7e-10, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 108/335 (32%), Gaps = 43/335 (12%) Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFH--SQFKYLSDGHARYQAKFSANEITILP 298 + + + + G+ W+ +P+ S + A A + + P Sbjct: 41 QLRSRTSTQNASGLISTSWSPGLLPAAGASSSRFNSTAASPSPAAEPAASVAIDSTVNAP 100 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 S + A + + I + + ++ + ++ + G Sbjct: 101 VSSGAQAIDSLSAADLVSV--DISQIPEKLGYLKAIGLDYGWGPSRVIETVLESLHIYGG 158 Query: 359 NFGIAI-MLTTVFVKLLFFPLAKKQYVS-------TANMKNIQPKIDELREKFKQSPPQV 410 + T+V ++L A + + Q +I + Q Sbjct: 159 LPWWGAAIGTSVLLRLFVLKFAMGASDTSAKVASIKHITQPFQVEIQRCYRENDTVGLQR 218 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLA 466 + + + ++H+I L L+Q+P+ F ++V+ + + + W+ ++ Sbjct: 219 VLQQRKIINESHDIK-LRRLAYPLVQLPLSFGAFRVLRGMSALPVPGLDSESFLWLSNVT 277 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAM---IL 520 DP I PI L M K+ + D M IL Sbjct: 278 VHDPYF-------------------ILPITTGLIMHYTFKLGGENAGANDPTAMMAKPIL 318 Query: 521 NW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 + +P++ S P L I+++ ++V++I Q Sbjct: 319 LYGLPILSTVCTSFLPGILQIFFATTSVLAIGQSY 353 >gi|213400715|gb|ACJ47006.1| hypothetical protein [Wolbachia endosymbiont of Drosophila simulans] Length = 171 Score = 70.4 bits (170), Expect = 7e-10, Method: Composition-based stats. Identities = 62/164 (37%), Positives = 93/164 (56%), Gaps = 2/164 (1%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282 + L E Y DI K + S +W G +DKYW + IP K + K+ + + Sbjct: 8 FNNKLEEWTYKDISKKRLIKASTSEKNWFGFADKYWLTAIIPKKSDKINVSIKHTNVNNI 67 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 ++QA F ILPG S +T N+ FAGAK+ + Y+ L IP F+ +D+G YFI Sbjct: 68 DKFQADFVRPYTHILPGTSASTLNYFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFI 127 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + Y+S Sbjct: 128 TKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYISM 171 >gi|325912104|ref|ZP_08174502.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners UPII 143-D] gi|325476054|gb|EGC79222.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners UPII 143-D] Length = 319 Score = 70.4 bits (170), Expect = 7e-10, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 G + +I + V N G AI++ T ++L+ PL Sbjct: 35 VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94 Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 + Q + + K + L + +++YK +N++ + GC P+L+Q+P+ Sbjct: 95 QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + + F G + P + + I+ Sbjct: 155 MGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192 Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 IQ +S + Q + P++ + + L +Y+ ++ ++QQ + Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + + +KN + Sbjct: 252 TFILM--PKVRADVDKELTKNPIKE 274 >gi|73661782|ref|YP_300563.1| lipoprotein precursor [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494297|dbj|BAE17618.1| truncated lipoprotein precursor [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 191 Score = 70.4 bits (170), Expect = 7e-10, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 71/187 (37%), Gaps = 35/187 (18%) Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINP---LAGCWPIL 434 ++ + +QP+ID L+E K + Q + ++ YK ++INP + GC PIL Sbjct: 1 MHMMREKTEVVQPQIDTLKENVKLAKTQEEKLEANKLLMDTYKQYDINPLKNMIGCLPIL 60 Query: 435 LQIPVFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 +Q+P+ + + + + P + W F L + Sbjct: 61 IQLPILYGLIITLKFPSDGGIDSHPHFLW------------FNLTEPNLWIS-------- 100 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 +I ++ F Q ++ K Q ++ P+ + + L +YW+ + Sbjct: 101 --LIAAVVYFFQTLVNAIHYPKDQRKTHYVLMILSPIFITYISLQSASALGLYWTVGGLF 158 Query: 549 SIVQQAV 555 I+Q Sbjct: 159 LIIQMHF 165 >gi|300859432|ref|YP_003784415.1| hypothetical protein cpfrc_02015 [Corynebacterium pseudotuberculosis FRC41] gi|300686886|gb|ADK29808.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] Length = 406 Score = 70.4 bits (170), Expect = 7e-10, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 97/269 (36%), Gaps = 50/269 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 P+ +M ++ + N + +++ + V+ + P Q S Sbjct: 8 IEIFIYPVSGVMKLWHLFLANMLGVPASLAWALSLFALVITVRGIVAPFTWIQLKSGRAG 67 Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 ++PK+ L+E++++ + Q+ +L+K + + +GC P L+QIPVF +Y+ Sbjct: 68 ILMRPKLKRLQEEYEEKTDKESILEYQQKQKELHKEYGYSVKSGCVPALIQIPVFLGLYQ 127 Query: 446 VISIS---LEMRHAPFWGWIKDLAAADPTNIF------------------TLFGILPFYL 484 V+ +E A I L++ D + + Y Sbjct: 128 VLLRMARPVEGLDANNHAPIGLLSSDDVSAFLESRVSDVPLPAYNAMSAEQFARLNTTYD 187 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPAD---------KGQAMILNWMPVVFVFALS--- 532 V I + I + +S + Q L + + F + Sbjct: 188 AVHAFVTPLIIAACVFTVINLIISVVRNNYSVDHDSGLAVQLNRLLIIMIFFTPLMLISL 247 Query: 533 ----SFPAGLIIYWSWSNVISIVQQAVIM 557 PA + +YW +N+ +++Q A++ Sbjct: 248 GLRSPIPAAICMYWVANNLWTLIQNALMY 276 >gi|325474002|gb|EGC77190.1| inner membrane protein [Treponema denticola F0402] Length = 901 Score = 70.4 bits (170), Expect = 7e-10, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 95/223 (42%), Gaps = 17/223 (7%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNF-GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + + Y + + ++ N+ + G++I++ ++ + L+ P+ + I Sbjct: 5 LYTIFIYPVYMFVEFILFIANNITQDHIGLSIIILSLGINLITLPIYNVAEKWQEMERII 64 Query: 393 QPKIDE----LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 Q ++ ++ FK ++ A + H + L + + +QIP F A Y+++S Sbjct: 65 QKRMKPKVNDIKAVFKGDERYMILSAYYRQNNYHPLYALRSLFALFIQIPFFIAAYQLLS 124 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 ++ + ++KDL A D G + + + PIIM++ + Sbjct: 125 ELPALKETS-FLFLKDLGAPDK-----------LINIGSVSLNLLPIIMTVINIAASAVY 172 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + + L +F+ L + P+GL++YW+ +N+ S+ Sbjct: 173 TKDLELKDKLTLYLTAFLFLILLYNSPSGLVLYWTLNNIFSLF 215 >gi|21221301|ref|NP_627080.1| membrane protein [Streptomyces coelicolor A3(2)] gi|6689184|emb|CAB65581.1| putative membrane protein [Streptomyces coelicolor A3(2)] Length = 237 Score = 70.4 bits (170), Expect = 7e-10, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 17/211 (8%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T V+LL PL++ +QP+I ELR K ++P + LQ+A+++L+ Sbjct: 28 IILFTALVRLLVHPLSRAAARGQKARTRLQPRIAELRRKHAKNPEK-LQRAVLELHAEEK 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF-GILPF 482 ++PL+GC P L QIP FF +Y + S S + LAA F Sbjct: 87 VSPLSGCLPSLCQIPAFFLLYHLFSSSTIGGEVNGLLSHQLLAAPLGGRWADAFGDGGLL 146 Query: 483 YLPGFMHVGIWPIIMSLSMFIQ--MKMSP------PPAD----KGQAMILNWMPVVFVFA 530 G ++V ++ ++ ++ F + + P D G + MP + F Sbjct: 147 GGAGLVYVALFAVVAGVATFSYRLTRRTMADRPVLPAGDAGAVPGVGALTRVMPFMSFFT 206 Query: 531 LSS---FPAGLIIYWSWSNVISIVQQAVIMK 558 L + P +Y S S V++AV+ + Sbjct: 207 LVTVAVVPLAAALYVVTSTTWSAVERAVLYR 237 >gi|261202448|ref|XP_002628438.1| mitochondrial Oxa1p [Ajellomyces dermatitidis SLH14081] gi|239590535|gb|EEQ73116.1| mitochondrial Oxa1p [Ajellomyces dermatitidis SLH14081] Length = 498 Score = 70.4 bits (170), Expect = 7e-10, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 108/335 (32%), Gaps = 43/335 (12%) Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFH--SQFKYLSDGHARYQAKFSANEITILP 298 + + + + G+ W+ +P+ S + A A + + P Sbjct: 41 QLRSRTSTQNASGLISTSWSPGLLPAAGASSSRFNSTAASPSPAAEPAASVAIDSTVNAP 100 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 S + A + + I + + ++ + ++ + G Sbjct: 101 VSSGAQAIDSLSAADLVSV--DISQIPEKLGYLKAIGLDYGWGPSRVIETVLESLHIYGG 158 Query: 359 NFGIAI-MLTTVFVKLLFFPLAKKQYVS-------TANMKNIQPKIDELREKFKQSPPQV 410 + T+V ++L A + + Q +I + Q Sbjct: 159 LPWWGAAIGTSVLLRLFVLKFAMGASDTSAKVASIKHITQPFQVEIQRCYRENDTVGLQR 218 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDLA 466 + + + ++H+I L L+Q+P+ F ++V+ + + + W+ ++ Sbjct: 219 VLQQRKIINESHDIK-LRRLAYPLVQLPLSFGAFRVLRGMSALPVPGLDSEAFLWLSNVT 277 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAM---IL 520 DP I PI L M K+ + D M IL Sbjct: 278 VHDPYF-------------------ILPITTGLIMHYTFKLGGENAGANDPTAMMAKPIL 318 Query: 521 NW-MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 + +P++ S P L I+++ ++V++I Q Sbjct: 319 LYGLPILSTVCTSFLPGILQIFFATTSVLAIGQSY 353 >gi|225028842|ref|ZP_03718034.1| hypothetical protein EUBHAL_03129 [Eubacterium hallii DSM 3353] gi|224953838|gb|EEG35047.1| hypothetical protein EUBHAL_03129 [Eubacterium hallii DSM 3353] Length = 428 Score = 70.4 bits (170), Expect = 7e-10, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 7/77 (9%) Query: 492 IWPIIMSLSMFIQMKMSPPP-------ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 + PI+ +L ++ K P A + MP++ ++ PAGL IYW Sbjct: 241 LIPILAALFQYLSAKTMKQPELDGNNPAAGMTKSMTVMMPLMSLYFCLVTPAGLGIYWVT 300 Query: 545 SNVISIVQQAVIMKMHG 561 S + +QQ +I K Sbjct: 301 SALFQCLQQVIINKYMD 317 Score = 60.8 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 6/122 (4%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLV--GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 GW + + + Y N + N G+ I++ T+ V+LL PL KQ + Sbjct: 8 TPIIGWIATLLGYVMEFIFYCLNFIGIQNIGLCIIIFTIIVRLLMLPLTIKQQKFAKISQ 67 Query: 391 NIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 +QP+I++++ K++ Q + + ++Y+ + NP GC +++Q+P+F A+Y+V Sbjct: 68 VMQPEINKIQRKYRNKTDQASMMKQNEEIQKVYEKYGTNPTGGCLQLVVQMPIFLALYQV 127 Query: 447 IS 448 I Sbjct: 128 IR 129 >gi|325474004|gb|EGC77192.1| hypothetical protein HMPREF9353_01542 [Treponema denticola F0402] Length = 954 Score = 70.4 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 21/230 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 G Y + + +Y YN+ GN+GIA++L ++F+ + PL K +Q K Sbjct: 9 TGLLYPFVVLIQTVFTYSYNICGNYGIALILLSLFITAITAPLYYLAERWKNKEKVVQKK 68 Query: 396 I----DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + + E ++ L KA ++Y + +++QIP FFA Y+V+S Sbjct: 69 MHKDIKSINENYEGQKRFYLTKAARKIYDYKWWYTFRTSFGLIIQIPFFFAAYEVLSKYS 128 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 + +IKDL D V + P +M+L Sbjct: 129 GYNGVS-FLFIKDLGLPD---------------NLVSGVNVLPFVMTLINIAYSIYYTKS 172 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 L M +F+ L + P+ L++YW+ +NV S + + +I++ G Sbjct: 173 KSWNANKELYIMAGIFLVLLYNSPSALLLYWTMNNVFSFI-KGIILRKAG 221 >gi|37521800|ref|NP_925177.1| putative inner membrane protein translocase component YidC [Gloeobacter violaceus PCC 7421] gi|35212798|dbj|BAC90172.1| glr2231 [Gloeobacter violaceus PCC 7421] Length = 369 Score = 70.4 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 10/95 (10%) Query: 492 IWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVF--VFALSSFPAGLIIYWSWSN 546 + ++ +S++ M+ P + Q I P +F +F PAG+++Y SN Sbjct: 261 LMIVLFGVSLYFSQNMTAKHNPSMTEQQKQINKITPFIFSGMFVFFPLPAGVLLYILLSN 320 Query: 547 VISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + IVQ ++ + L + ++ + + Sbjct: 321 LFQIVQTYLLYR-----EPLPENIQRILDQAKRKE 350 Score = 58.5 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 70/120 (58%), Gaps = 4/120 (3%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ + Y +V N+G+ I+L T+ VK L +PL S M+ +Q Sbjct: 1 MDFGVGFLTNSVMLPILDFLYRIVPNYGVGIVLLTLIVKGLLWPLTAGSIRSMRKMQVVQ 60 Query: 394 PKIDELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P++ ++ ++ + P+ +Q+ M LYK + NPLAGC P+++Q+P+ FA++ + S Sbjct: 61 PEMQRRTKEIQEKYKNEPERMQQEMAGLYKEYG-NPLAGCLPLVVQMPILFALFATLRGS 119 >gi|313665770|ref|YP_004047641.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma leachii PG50] gi|312949391|gb|ADR23987.1| membrane protein insertase, YidC/Oxa1 family [Mycoplasma leachii PG50] Length = 396 Score = 70.4 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 90/222 (40%), Gaps = 16/222 (7%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-- 413 + AI LTT+ +K + K ++ M++IQ K+ +++ K+K ++ Sbjct: 160 YGISAIFAIFLTTLLIKGITLSFGWKSQINQEKMQDIQLKVADIQAKYKDKKDMQSKQKQ 219 Query: 414 --AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + LYK N++ + +P FAIY ++ + ++ A +A + Sbjct: 220 QLEIQALYKKENMSQFSALAGSFAPLPFLFAIYAIVRSTRALKIAAVG----PIALIEGP 275 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAM------ILNW-M 523 G + + +++ + I M L +QMK + Q I+ M Sbjct: 276 WQQITAGNYIYIIILAIYLPLQAISMLLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVM 335 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 VF+ + S G+ IYW +S+V+ I+Q + + Sbjct: 336 MFVFIIIIVSVATGVCIYWIFSSVLQIIQTYAFYLYNEKKRK 377 >gi|331703940|ref|YP_004400627.1| membrane protein OxaA [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802495|emb|CBW54650.1| Membrane protein OxaA [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 388 Score = 70.4 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 16/211 (7%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-- 413 + AI LTT+ +K + K ++ M++IQ KI +++ K+K ++ Sbjct: 152 YGISAIFAIFLTTLLIKGITLSFGWKSQINQEKMQDIQLKIADIQAKYKDKKDMQSKQKQ 211 Query: 414 --AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 + LYK N++ + +P FAIY ++ + ++ A +A + Sbjct: 212 QLEIQALYKKENMSQFSALAGSFAPLPFLFAIYAIVRSTRALKIAAVG----PIALIEGP 267 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAM------ILNW-M 523 G + + +++ + + M L +QMK + Q I+ M Sbjct: 268 WQQITSGNYIYIIILAIYLPLQAVSMLLPTLLQMKKQKSITLTEAQKKSRKKQLIMQVVM 327 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 VF+ + S G+ IYW +S+V+ I+Q Sbjct: 328 MFVFIIIIVSVATGVCIYWIFSSVLQIIQTY 358 >gi|302207109|gb|ADL11451.1| Preprotein translocase subunit YidC [Corynebacterium pseudotuberculosis C231] gi|308277364|gb|ADO27263.1| Preprotein translocase subunit YidC [Corynebacterium pseudotuberculosis I19] Length = 415 Score = 70.4 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 97/269 (36%), Gaps = 50/269 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 P+ +M ++ + N + +++ + V+ + P Q S Sbjct: 17 IEIFIYPVSGVMKLWHLFLANMLGVPASLAWALSLFALVITVRGIVAPFTWIQLKSGRAG 76 Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 ++PK+ L+E++++ + Q+ +L+K + + +GC P L+QIPVF +Y+ Sbjct: 77 ILMRPKLKRLQEEYEEKTDKESILEYQQKQKELHKEYGYSVKSGCVPALIQIPVFLGLYQ 136 Query: 446 VISIS---LEMRHAPFWGWIKDLAAADPTNIF------------------TLFGILPFYL 484 V+ +E A I L++ D + + Y Sbjct: 137 VLLRMARPVEGLDANNHAPIGLLSSDDVSAFLESRVSDVPLPAYNAMSAEQFARLNTTYD 196 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPAD---------KGQAMILNWMPVVFVFALS--- 532 V I + I + +S + Q L + + F + Sbjct: 197 AVHAFVTPLIIAACVFTVINLIISVVRNNYSVDHDSGLAVQLNRLLIIMIFFTPLMLISL 256 Query: 533 ----SFPAGLIIYWSWSNVISIVQQAVIM 557 PA + +YW +N+ +++Q A++ Sbjct: 257 GLRSPIPAAICMYWVANNLWTLIQNALMY 285 >gi|311741703|ref|ZP_07715525.1| preprotein translocase YidC subunit [Corynebacterium pseudogenitalium ATCC 33035] gi|311303224|gb|EFQ79305.1| preprotein translocase YidC subunit [Corynebacterium pseudogenitalium ATCC 33035] Length = 325 Score = 70.4 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 57/289 (19%), Positives = 106/289 (36%), Gaps = 66/289 (22%) Query: 338 WFYFIAKPMFMLMSYFYN---------LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 FI P+ ++ +++ + +AI+L T +K L Q S+ Sbjct: 1 MLNFIYWPISAVLWFWHWLLSLVMDPAWGITWILAIVLLTWTLKALMVKPTISQIRSSRK 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 M+ IQPK+ E+R K+ + + M ++YK + P+AGC P+ +QIP+F ++ V+ Sbjct: 61 MQEIQPKVQEIRAKYGNDQTKA-AQEMQKVYKESGVRPMAGCLPVFVQIPMFVGLFHVLR 119 Query: 449 I-------------------SLE-MRHAPFWGWIKDLAAA-------DPTNIFTLFGILP 481 S+E + + + DL D + L P Sbjct: 120 SFDRTVAVAGGIGHPSGDPMSIEDNANTANYIFKPDLVQQFLDAKIFDVPLVTNLRLNSP 179 Query: 482 ------FYLPGFMHVGIWPIIMSLSMF-IQMKMSPP----PADKGQA------------- 517 + V + +I ++ F +M ++ A K QA Sbjct: 180 IVEGVTTSQAAVIIVPMIAVIAVMTHFNARMSLNRQEKRRAAGKTQAPQGQNAEMMQQQM 239 Query: 518 -----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 M+L PV+ + +P GL+ Y + V + Q ++ Sbjct: 240 AMMSKMMLWVAPVMLILTGFIYPIGLLFYMLANTVWTFFQTRIVYAKMD 288 >gi|167750238|ref|ZP_02422365.1| hypothetical protein EUBSIR_01212 [Eubacterium siraeum DSM 15702] gi|167656800|gb|EDS00930.1| hypothetical protein EUBSIR_01212 [Eubacterium siraeum DSM 15702] Length = 441 Score = 70.4 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 16/159 (10%) Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 + Q P F K++S ++ R A L+ + + Sbjct: 234 LQVYEQYPDTFKESKILSDDVKGRLAS-------LSHNMMFCGLNFGSTPKLAFEPLIII 286 Query: 491 GIWPIIMSL-----SMFIQMKMSPPPADK--GQAMILNW-MPVVFVFALSSFPAGLIIYW 542 I+ ++SL S ++ K +P A+ ++ + MP+ ++ S PAG+ YW Sbjct: 287 PIFAFVLSLVQTVLSQYLNKKNNPEMANAGGAGMKVMLYLMPLFSLWISFSVPAGVGFYW 346 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + IVQ V+ K++ E L + + Sbjct: 347 GVNYALGIVQSLVMQKLYSPE-KLRAEAEEKMKERKLKE 384 Score = 51.1 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M Y L+ NFG AI++ TV VK+ PL KQ + A + PK+ E+++K++ + + Sbjct: 1 MWPIYLLLQNFGWAILIFTVIVKIAMLPLQIKQQKNMAFSQLFAPKVKEIQQKYRNNRDK 60 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 Q +Q + NP GC P++L + + F + V+ Sbjct: 61 --QAEEMQKLQAQGYNPAGGCGPLILTMVILFGVIDVVY 97 >gi|291531377|emb|CBK96962.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Eubacterium siraeum 70/3] Length = 441 Score = 70.4 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 16/159 (10%) Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 + Q P F ++S +++ R A L+ + + Sbjct: 234 LQVYEQYPDTFKESNILSDNVKGRLAS-------LSHNMMFCGLNFGTTPKLAFEPLIII 286 Query: 491 GIWPIIMSL-----SMFIQMKMSPPPADKG---QAMILNWMPVVFVFALSSFPAGLIIYW 542 I+ ++SL S ++ K +P A+ G ++L MP+ ++ S PAG+ YW Sbjct: 287 PIFAFVLSLVQTVLSQYLNKKNNPEMANAGGAGMKVMLYIMPLFSLWISFSVPAGVGFYW 346 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + IVQ V+ K++ E L + + Sbjct: 347 GVNYALGIVQSLVMQKLYSPE-KLRAEAEEKMKERKLKE 384 Score = 51.1 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M Y L+ NFG AI++ TV VKL PL KQ + A + PK+ E+++K++ + + Sbjct: 1 MWPIYLLLQNFGWAILIFTVIVKLAMLPLQIKQQKNMAFSQLFAPKVKEIQQKYRNNRDK 60 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 Q +Q + NP GC P++L + + F + V+ Sbjct: 61 --QAEEMQKLQAQGYNPAGGCGPLVLTMIILFGVIDVVY 97 >gi|284931019|gb|ADC30957.1| putative inner membrane protein translocase component YidC [Mycoplasma gallisepticum str. F] Length = 383 Score = 70.4 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 16/202 (7%) Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 I + + ++ Q ++ +YK H I P A + I Sbjct: 170 STLNTERMGEVQGKIAEINAKYKNATDTQSKKMKQIEVMHIYKKHKIKPAALFVQGFVTI 229 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 P+F +YK++S++ ++ A I DL+ T I + Y+ + V I+ Sbjct: 230 PIFLIVYKMVSLTRPIK-ATILFGIWDLSVTPGTEIISDISRNWVYIFFVLLVVPMQIVS 288 Query: 498 -SLSMFIQMKMSPPPADKGQA---------MILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 L F + + Q I + VF P+ + +YW +++ Sbjct: 289 QWLPQFWATRRNRNAKTTSQKGLEQLKKTRRIQWILIFVFALFPVITPSAVGLYWFLNSI 348 Query: 548 ISIVQQA-----VIMKMHGAEI 564 +I+Q ++ + + Sbjct: 349 FTILQSYITHVFIVKRRQRTKT 370 >gi|31544213|ref|NP_852791.1| putative inner membrane protein translocase component YidC [Mycoplasma gallisepticum str. R(low)] gi|38502878|sp|P60035|OXAA_MYCGA RecName: Full=Membrane protein oxaA gi|31541057|gb|AAP56359.1| putative inner membrane protein translocase component YidC [Mycoplasma gallisepticum str. R(low)] gi|284930251|gb|ADC30190.1| putative inner membrane protein translocase component YidC [Mycoplasma gallisepticum str. R(high)] Length = 383 Score = 70.0 bits (169), Expect = 9e-10, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 16/202 (7%) Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 I + + ++ Q ++ +YK H I P A + I Sbjct: 170 STLNTERMGEVQGKIAEINAKYKNATDTQSKKMKQIEVMHIYKKHKIKPAALFVQGFVTI 229 Query: 438 PVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 P+F +YK++S++ ++ A I DL+ T I + Y+ + V I+ Sbjct: 230 PIFLIVYKMVSLTRPIK-ATILFGIWDLSVTPGTEIISDISRNWVYIFFVLLVVPMQIVS 288 Query: 498 -SLSMFIQMKMSPPPADKGQA---------MILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 L F + + Q I + VF P+ + +YW +++ Sbjct: 289 QWLPQFWATRRNRNAKTTSQKGLEQLKKTRRIQWILIFVFALFPVITPSAVGLYWFLNSI 348 Query: 548 ISIVQQA-----VIMKMHGAEI 564 +I+Q ++ + + Sbjct: 349 FTILQSYITHVFIVKRRQRTKT 370 >gi|312871831|ref|ZP_07731919.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 3008A-a] gi|311092773|gb|EFQ51129.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 3008A-a] Length = 319 Score = 70.0 bits (169), Expect = 9e-10, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 G + +I + V N G AI++ T ++L+ PL Sbjct: 35 VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94 Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 + Q + + K + L + +++YK +N++ + GC P+L+Q+P+ Sbjct: 95 QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + A F G + P + + I+ Sbjct: 155 IGIYQAVAYSKTLASASFMG-------------------ISLSKPSIVFAVVAAILY--- 192 Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 IQ +S + Q + P++ + + L +Y+ ++ ++QQ + Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + + +K+ + Sbjct: 252 TFILM--PKVRSDVDKELTKHPIKE 274 >gi|312872933|ref|ZP_07732993.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2062A-h1] gi|311091455|gb|EFQ49839.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2062A-h1] Length = 319 Score = 70.0 bits (169), Expect = 9e-10, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 G + +I + V N G AI++ T ++L+ PL Sbjct: 35 VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94 Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 + Q + + K + L + +++YK +N++ + GC P+L+Q+P+ Sbjct: 95 QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + + F G + P + + I+ Sbjct: 155 MGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192 Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 IQ +S + Q + P++ + + L +Y+ ++ ++QQ + Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + + +KN + Sbjct: 252 TFILM--PKVRADVDKELTKNPIKE 274 >gi|291539803|emb|CBL12914.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Roseburia intestinalis XB6B4] Length = 430 Score = 70.0 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 12/117 (10%) Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP----------ADK 514 L +D + + P+I L+ + +K+ P Sbjct: 230 LNISDTPWQVMTTNFASHNFLFVVLALLVPVISYLTQVLNIKLMPQAAPSNGNSDNDMAA 289 Query: 515 GQAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 Q ++N MP+ + P GL IYW V+ VQQ + K H +I L D + Sbjct: 290 QQMKMMNRTMPIFSFVMCFTVPVGLGIYWIAGAVVRSVQQFFLNK-HFEKINLEDII 345 Score = 51.5 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 61/122 (50%), Gaps = 6/122 (4%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + ++ ++ LMS + N G++I++ T+ + + FPL KQ + + Sbjct: 11 LGPIAKVLGWVMNGIYALMSMIG--IENVGLSIIIFTIVIYAILFPLTYKQQKFSKLSQK 68 Query: 392 IQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +QP++ +++K+ Q +Q+ +Y+ + ++ + C +L+Q+P+ A+Y+V Sbjct: 69 MQPELQAIQKKYNGKKDQASMMAMQEETQAVYEKYGVSMMGSCVQMLIQMPLLCALYRVF 128 Query: 448 SI 449 Sbjct: 129 LN 130 >gi|323486758|ref|ZP_08092077.1| SpoJ protein [Clostridium symbiosum WAL-14163] gi|323694900|ref|ZP_08109050.1| hypothetical protein HMPREF9475_03914 [Clostridium symbiosum WAL-14673] gi|323399897|gb|EGA92276.1| SpoJ protein [Clostridium symbiosum WAL-14163] gi|323500990|gb|EGB16902.1| hypothetical protein HMPREF9475_03914 [Clostridium symbiosum WAL-14673] Length = 414 Score = 70.0 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 10/120 (8%) Query: 471 TNIFTLFGILPFYLPGFMHVGIW-PIIMSLSMFIQMKM--SPPPADK------GQAMILN 521 + + PF + + PI+ L+ + K+ + D ++ Sbjct: 221 SFLGINLATAPFTGFTNISIAWLIPILAGLTQWFSTKLMSNTQQMDPDAPGAQTMNTMMM 280 Query: 522 WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 MP+V VF +FPA + IYW IVQQ + ++ + + ++ K + Sbjct: 281 TMPLVSVFFCFTFPAAIGIYWVVQGAFQIVQQLAVNSYM-NKVDMDELIQKNVDKMNKKR 339 Score = 54.2 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 4/97 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQ 412 + N G+ I+L T+ KLL FPL KQ S+ M + P+I +++K+K Q Q Sbjct: 36 ILNLGLCIILFTIITKLLLFPLTIKQQKSSKLMSLMNPEIQAVQKKYKGKKDQTSMTKQQ 95 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 M +Y+ + +P AGC P+L+Q P+ A+Y+VI Sbjct: 96 MEMQAIYEKYGSSPTAGCLPMLIQFPIIIALYRVIYN 132 >gi|293400061|ref|ZP_06644207.1| stage III sporulation protein J [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306461|gb|EFE47704.1| stage III sporulation protein J [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 329 Score = 70.0 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 90/256 (35%), Gaps = 39/256 (15%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F +D GWF+ I + + + GI I+ T ++LL F + K V+ M Sbjct: 81 FSDAMDEGWFHGIIVYPIAQLINWVANFTDAGIGIIAATFLIQLLIFLFSIKSQVANQRM 140 Query: 390 KNIQPKIDELREKF----KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + +QP++ +++ K+ + M LY + INP +Q PV +Y+ Sbjct: 141 QALQPEMQKIQAKYAGRTDDRSKMAQAQEMQALYSKYKINPFGTLLITFIQFPVILGMYQ 200 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + F G I + G + G+ I+M L + Sbjct: 201 ATMRAYSVVTGHFAG------------INLAKTPIEGLKEGQIAFGVIFILMVLFQLLSF 248 Query: 506 KM-----------------------SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYW 542 KM P M++ + ++P G+ YW Sbjct: 249 KMPQWLQEHRKKKQHVKEKKYAEPKKQPGMMGSMNMMMYMSTAMIAIFAINWPLGMSFYW 308 Query: 543 SWSNVISIVQQAVIMK 558 ++++ + Q +I K Sbjct: 309 LVNSIVRVGQNLLIHK 324 >gi|197102216|ref|NP_001126369.1| mitochondrial inner membrane protein COX18 precursor [Pongo abelii] gi|73921530|sp|Q5R7D0|COX18_PONAB RecName: Full=Mitochondrial inner membrane protein COX18; Flags: Precursor gi|55731232|emb|CAH92330.1| hypothetical protein [Pongo abelii] Length = 334 Score = 70.0 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 63/164 (38%), Gaps = 32/164 (19%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI------------SLEMR-H 455 + +++ + +LY N +P + +Q+P++ + + S+E + Sbjct: 150 KNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLSTGAAHSEAGFSVEEQLA 209 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 A W DL A DPT I + + + + + K+ Sbjct: 210 AGGILWFSDLTAPDPTWIL---------PVSLGVINLLIVEICVL----QKIGMSR---F 253 Query: 516 QAMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q I + M V+ + ++ P+ +++YW S+ + + Q ++ Sbjct: 254 QTYITYFVRAMSVLMIPIAATVPSSIVLYWLCSSFVGLSQNLLL 297 >gi|309806133|ref|ZP_07700152.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 03V1-b] gi|309808392|ref|ZP_07702292.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 01V1-a] gi|308167488|gb|EFO69648.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 03V1-b] gi|308168360|gb|EFO70478.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 01V1-a] Length = 319 Score = 70.0 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 G + +I + V N G AI++ T ++L+ PL Sbjct: 35 VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94 Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 + Q + + K + L + +++YK +N++ + GC P+L+Q+P+ Sbjct: 95 QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + + F G + P + + I+ Sbjct: 155 IGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192 Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 IQ +S + Q + P++ + + L +Y+ ++ ++QQ + Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + + +K+ + Sbjct: 252 TFILM--PKVRADVDKELAKHPIKE 274 >gi|46122969|ref|XP_386038.1| hypothetical protein FG05862.1 [Gibberella zeae PH-1] Length = 485 Score = 70.0 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 86/245 (35%), Gaps = 34/245 (13%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 F I + + M + + + G +G I+ T V ++L+ F + +A Sbjct: 162 GFLKEIGLDYGWGPTSIMQWTLEHIHVYTGLGWGGTIVATAVLLRLVMFYPQVRAVKFSA 221 Query: 388 NMKNIQPK--------IDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 + + + + + K + + + ++ + + + G + LQIP Sbjct: 222 ALNESKKDPRFQEAIDLMKKGYQTKNNEMTQKGQFLNKMVRETHGASMTGMFWPFLQIPF 281 Query: 440 FFAIYKVISISLEMRHAPF-------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 F ++++I+ M H P + W DL ADP F LP F+ I Sbjct: 282 SFGLFRIING---MTHIPVPALEDAGFLWFTDLTVADP------FYCLPALGTAFLVSSI 332 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +I K P ++ M V + AG+ + + + ++V Sbjct: 333 --VING-------KYQPAAQRATTKKLMWVMGGVTFAFTTYLAAGVNLMMTTTGAAALVT 383 Query: 553 QAVIM 557 ++ Sbjct: 384 TTLLN 388 >gi|163840009|ref|YP_001624414.1| preprotein translocase YidC subunit [Renibacterium salmoninarum ATCC 33209] gi|162953485|gb|ABY23000.1| preprotein translocase YidC subunit [Renibacterium salmoninarum ATCC 33209] Length = 283 Score = 70.0 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 102/239 (42%), Gaps = 19/239 (7%) Query: 341 FIAKPMFMLMSYFYNLVGNF------GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 + + + + + +++ F G+AI+ T+ V+ + P Q I P Sbjct: 36 WALEIGYQFLHWLASVLEPFAGAASAGLAIIALTILVRTVLIPAGLSQVSGEIGRARIAP 95 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 ++ E++ K ++P Q+L + + LYK+ ++ AG P LLQ PV +Y + ++ Sbjct: 96 QLKEIQRKHAKNP-QLLSEKTMALYKSEGVSMFAGIGPALLQAPVLMVVYGLFILAQIGG 154 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM---KMSPPP 511 HA A ++ L G+++ G+ +I++++ + + +++ Sbjct: 155 HANTLLDQVFGGAPLGQSVVHLVSTGSMLPAGWVYAGVVAVILAVAEYNRSRALRLNAAG 214 Query: 512 ADK--GQ-------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 D Q A IL W+ + FP +Y + V + V++A++ + G Sbjct: 215 QDPSATQPAGTGTLARILPWLSYITAVTALFFPLAAALYLMTTTVWTAVERAIMRRALG 273 >gi|167624619|ref|YP_001674913.1| 60 kDa inner membrane insertion protein [Shewanella halifaxensis HAW-EB4] gi|167354641|gb|ABZ77254.1| 60 kDa inner membrane insertion protein [Shewanella halifaxensis HAW-EB4] Length = 219 Score = 70.0 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 92/228 (40%), Gaps = 31/228 (13%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 W F + + + + G+AI+L T+ V+LLF P++ +++ K I Sbjct: 4 WTNFTDLLIQTIGFLTTEVGVSQGVAIILLTLVVRLLFSPISCSAMINSYKNKKTMAAIK 63 Query: 398 ELREK---FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILL--QIPVFFAIYKVISISLE 452 +K + P + K + LY+ H+I ++ + Q F +++V+ ++ Sbjct: 64 PELDKLKSVYKDKPNEMAKQTMALYRKHDIKFISKTLVANVSSQAIFGFGMFQVLQKAI- 122 Query: 453 MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + + WI ++A D +++ ++ M M P A Sbjct: 123 --FSSKFAWISNIAKPD---------------------IALAMLVGALTYLSMLMMPDSA 159 Query: 513 DKGQAMILNWMPVVFVF-ALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 ++ A + +P + L + P+ L +YW+ S+ +Q V+ K Sbjct: 160 EQANA-LFLLIPAMVSVAVLVTAPSALSLYWATSSAFGALQSLVVNKY 206 >gi|195171512|ref|XP_002026549.1| GL21799 [Drosophila persimilis] gi|194111465|gb|EDW33508.1| GL21799 [Drosophila persimilis] Length = 197 Score = 70.0 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 27/119 (22%) Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + ++ + ++ W +DL ADP I P+I S + Sbjct: 1 MGLRQMANTPVDSMRDGGLWWFQDLTLADPFY-------------------ILPLITSAT 41 Query: 501 MFIQ-------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +++ ++S + +L +P+V +FPA ++ YW+ SN IS+ Q Sbjct: 42 LYLTIEIGTDSARLSAANMNTM-KYVLRALPLVIFPFTMNFPAAILTYWACSNFISLGQ 99 >gi|331002963|ref|ZP_08326475.1| hypothetical protein HMPREF0491_01337 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413007|gb|EGG92382.1| hypothetical protein HMPREF0491_01337 [Lachnospiraceae oral taxon 107 str. F0167] Length = 418 Score = 69.6 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 55/339 (16%), Positives = 111/339 (32%), Gaps = 83/339 (24%) Query: 325 LAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 + I +F F++ F + N G+AI++ T+ + ++ PL Q Sbjct: 1 MDIVLLTKSTTPIIGWFAEILGFIMNLIFDIGITNIGVAIIVFTIVINIIMIPLTINQQK 60 Query: 385 STANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINP-------------L 427 S M IQP++ +++K+K + +Y + + L Sbjct: 61 SQKLMAVIQPEVKAIQDKYKGKTDNESAVKMNAETRAVYSKYGTSMTGGCLPLLIQMPIL 120 Query: 428 AGCWPILLQIPVFFAIYKVISISLE---MRHAPFWGWIKDLAAA---------------- 468 G + ++ +IP + + I ++ M+ + I +LA A Sbjct: 121 FGLYQVIYRIPAYVTSVRGIFETVATSLMKEPDYINKISELAKAVRLPIESNDYTITNKV 180 Query: 469 -DPTNIF-----------------------------TLFGILPFYLPGF------MHVGI 492 D F F + + + I Sbjct: 181 IDLLYKFTPEKWTTLSETFPNMSSVLETSIPLIKQMNSFLGIDLSVAPWQGMNNINVAWI 240 Query: 493 WPIIMSLSMFIQMKMS----PPPADK------GQAMILNWMPVVFVFALSSFPAGLIIYW 542 P++ ++ FI K+ P AD + MP++ V +FPAG+ IYW Sbjct: 241 IPVLAGVTQFISTKVMTVNQPKNADTENEMARQMQSMNTVMPIMSVVFCFTFPAGIGIYW 300 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 S + V Q ++ ++ + + + +K + Sbjct: 301 IASALARTVVQLLVNYRLK-DLDIDKLVENNLAKQNAKR 338 >gi|114594339|ref|XP_001158183.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] Length = 336 Score = 69.6 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 60/163 (36%), Gaps = 31/163 (19%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFW-------- 459 + +++ + +LY N +P + +Q+P++ + + S H+ + Sbjct: 153 KNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLSTGAAHSEGFSVQEQLAT 212 Query: 460 ---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 W DL A D T I + + + + K+ Q Sbjct: 213 GGILWFPDLTAPDSTWIL---------PISVGVINLLIVEICAL----QKIGMSR---FQ 256 Query: 517 AMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 I + M V+ + ++ P+ +++YW S+ + + Q ++ Sbjct: 257 TYITYFVRAMSVLMIPIAATVPSSIVLYWLCSSFVGLSQNLLL 299 >gi|163784042|ref|ZP_02178998.1| hypothetical protein HG1285_01298 [Hydrogenivirga sp. 128-5-R1-1] gi|159880683|gb|EDP74231.1| hypothetical protein HG1285_01298 [Hydrogenivirga sp. 128-5-R1-1] Length = 387 Score = 69.6 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 53/419 (12%), Positives = 124/419 (29%), Gaps = 72/419 (17%) Query: 2 ERNWNYFVAIALSVIIVYAW----QNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 + + + +++ + Q P ++ + + K + + A Sbjct: 7 DMQKRILLFFVIVSVLLIGYTVINQIINPLPEKQQTEKQPQIQTVNKTVEKSGENTAQEK 66 Query: 58 IDDRAQAL-------------------------SMSPRVELKNPSLIGSINLKGAQFDDL 92 + + ++ +E+K + I+ GA+ + Sbjct: 67 FAKKEEKNIHSNITYSSSGTYDLLLNNLRFKSDNLKDFIEIKTSYGVVKISKIGARVISV 126 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 L Y+ D P K+ + ++T I + + +N Sbjct: 127 YLNQYNTDTI----------PKVAKDNKIFPTEIITTNPKITALINFSEYNFKQSGNKY- 175 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATN 212 + +NI ++ L+ + ++ TA N Sbjct: 176 -----IFELEKDNIKIKKIFILNPDETISYKLEY------SGLNNLGLAVVNGITPTAEN 224 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + G + K+ E + + + W G +KY+ + + Sbjct: 225 SSRGHRGSV----IKTDKELIKINSDIKTTQIVRGHIIWAGEENKYFLQIIANKTGFTST 280 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP---- 328 + L F F G K + + + Sbjct: 281 Y------------IIPIANETTLTLSEIKGNLEGFFFGGPKLYSLLGQINEKYKKEWNID 328 Query: 329 -RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 ID+G+F + KP+F+++ + YN + N+ +AI++ TV ++++ FPL K + Sbjct: 329 LALRNTIDFGFFGILGKPLFLVLHFIYNFIHNWALAIIILTVLLRIILFPLNHKSLKAM 387 >gi|213400713|gb|ACJ47005.1| hypothetical protein [Wolbachia endosymbiont of Armadillidium vulgare] Length = 171 Score = 69.6 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 2/164 (1%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282 + L E Y DI K + S SW G +DKYW + I K + KY + + Sbjct: 8 FNNKLEEWTYKDISKKRLIKTSTSEKSWFGFADKYWFTAIITEKSDKINVSIKYTNVNNI 67 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 ++QA F ILPG S +T N+ FAGAK+ + Y+ L IP F+ +D+G YFI Sbjct: 68 DKFQADFVRPYKHILPGASASTLNYFFAGAKKLNLLDAYKDTLNIPLFDKAVDFGVLYFI 127 Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 KP+F+L+ YF ++ NFG+AI+L T+ +KLL PL+ + Y+S Sbjct: 128 TKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYISM 171 >gi|145534225|ref|XP_001452857.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124420556|emb|CAK85460.1| unnamed protein product [Paramecium tetraurelia] Length = 358 Score = 69.2 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 94/254 (37%), Gaps = 44/254 (17%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR--- 400 +L+ +L G I+ ++ +K+ F PL ++ MK I+P+ + Sbjct: 59 YSRELLLYLANDLSWGMGWGILAISMGIKIAFTPLMFSAQLNACRMKLIEPESKNFQNMI 118 Query: 401 ---EKFKQSPPQVLQKAMIQLYK-THNINPLAGCWPILLQIPVFFAIYKVISIS------ 450 + + + +L+K HNIN L IL Q+P F + + Sbjct: 119 QRAMRAQDFKASRAAQKQFKLFKRKHNINMLIPGLSIL-QMPFLFTWFLSLRYVCSLPDK 177 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E + + W +DL+ DP GI PI+ S+ F + ++P Sbjct: 178 YEGLKSQGFLWFQDLSEYDPY-------------------GILPIMSSIFTFWNISLNPN 218 Query: 511 PADKGQ------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV-----IMKM 559 + + ++P + + FPAG+ +YW S + ++ A+ I K+ Sbjct: 219 MQSQSTVPFAKYYRYVRFLPFFSIPVVIFFPAGVNLYWCSSALCHLIITALARQEQIRKI 278 Query: 560 HGAEIGLIDRLRST 573 G L + Sbjct: 279 FGIPKYLPGTILER 292 >gi|309803185|ref|ZP_07697282.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 11V1-d] gi|308164693|gb|EFO66943.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 11V1-d] Length = 308 Score = 69.2 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 G + +I + V N G AI++ T ++L+ PL Sbjct: 24 VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 83 Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 + Q + + K + L + +++YK +N++ + GC P+L+Q+P+ Sbjct: 84 QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 143 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + + F G + P + + I+ Sbjct: 144 IGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 181 Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 IQ +S + Q + P++ + + L +Y+ ++ ++QQ + Sbjct: 182 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 240 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + + +K+ + Sbjct: 241 TFILM--PKVRADVDKELTKHPIKE 263 >gi|257413827|ref|ZP_04744347.2| sporulation associated-membrane protein [Roseburia intestinalis L1-82] gi|257202162|gb|EEV00447.1| sporulation associated-membrane protein [Roseburia intestinalis L1-82] Length = 430 Score = 69.2 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 12/117 (10%) Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP----------ADK 514 L +D + + P+I L+ + +K+ P Sbjct: 230 LNISDTPWQVMTTNFASHNFLFVVLALLVPVISYLTQVLNIKLMPQAAPSNGNSDNDMAA 289 Query: 515 GQAMILN-WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRL 570 Q ++N MP+ + P GL IYW V+ VQQ + K H +I L D + Sbjct: 290 QQMKMMNRTMPIFSFVMCFTVPVGLGIYWIAGAVVRSVQQFFLNK-HFEKINLEDII 345 Score = 53.1 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 62/122 (50%), Gaps = 6/122 (4%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + ++ ++ LMS + N G++I++ T+ + + FPL KQ + + Sbjct: 11 LGPIAKVLGWVMNGIYALMSMIG--IENVGLSIIIFTIVIYAILFPLTYKQQKFSKLSQK 68 Query: 392 IQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 +QP++ +++K+ Q +Q+ +Y+ + ++ + C +L+Q+P+ FA+Y+V Sbjct: 69 MQPELQAIQKKYNGKKDQASMMAMQEETQAVYEKYGVSMMGSCVQMLIQMPLLFALYRVF 128 Query: 448 SI 449 Sbjct: 129 LN 130 >gi|302331670|gb|ADL21864.1| Preprotein translocase subunit YidC [Corynebacterium pseudotuberculosis 1002] Length = 415 Score = 69.2 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 96/269 (35%), Gaps = 50/269 (18%) Query: 339 FYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 P+ +M ++ + N + +++ + V+ + P Q S Sbjct: 17 IEIFIYPVSGVMKLWHLFLANMLGVPASLAWALSLFALVITVRGIVAPFTWIQLKSGRAG 76 Query: 390 KNIQPKIDELREKFKQSPPQV----LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 ++PK+ L+E++++ + Q+ +L+K + + +GC P L+QIPVF +Y+ Sbjct: 77 ILMRPKLKRLQEEYEEKTDKESILEYQQKQKELHKEYGYSVKSGCVPALIQIPVFLGLYQ 136 Query: 446 VISISL-------EMRHAPFWGWIKD--------------LAAADPTNIFTLFGILPFYL 484 V+ HAP D L A + + + Y Sbjct: 137 VLLRMARPMEGLDANNHAPIGLLSSDDVSAFLESRVSDVPLPAYNAMSAEQFARLNTTYD 196 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPAD---------KGQAMILNWMPVVFVFALS--- 532 V I + I + +S + Q L + + F + Sbjct: 197 AVHAFVTPLIIAACVFTVINLIISVVRNNYSVDHDSGLAVQLNRLLIIMIFFTPLMLISL 256 Query: 533 ----SFPAGLIIYWSWSNVISIVQQAVIM 557 PA + +YW +N+ +++Q A++ Sbjct: 257 GLRSPIPAAICMYWVANNLWTLIQNALMY 285 >gi|189210082|ref|XP_001941373.1| mitochondrial export translocase Oxa1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977466|gb|EDU44092.1| mitochondrial export translocase Oxa1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 585 Score = 69.2 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 79/233 (33%), Gaps = 35/233 (15%) Query: 332 MLIDWGWFYFIAKPMFMLMS-YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + Y + M + + + + +IM V V+ + F L A M Sbjct: 195 KEMGLDYGYGMTTLMQQGLEAIYISSGWGWAGSIMAAAVAVRCVTFALQAMTSDKAAVMA 254 Query: 391 NIQPKIDELREKFKQSPPQVLQKA--MIQLYKTHNINPLAGCWP-----ILLQIPVFFAI 443 ++ P L++K + + + ++A M ++ + I P G ++ Q + + Sbjct: 255 SLGPITKPLQDKMEDAIARGDKQAADMYRMQQQEAIRPFIGGMASMGGFMIAQGWIGISA 314 Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 ++++ E+ + W DL DP P+ + Sbjct: 315 FRLMRAMAELPIPGMTTDGFLWFSDLTTRDPYFF-------------------LPVATTA 355 Query: 500 SMFIQMKMSP----PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 M+ K+ A K Q ++ M + A + IY+ S ++ Sbjct: 356 MMYTVFKLGGETGLQTASKSQKTMMTVMAFFLGAVTAFQAAAIQIYFFTSALL 408 >gi|291556189|emb|CBL33306.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain [Eubacterium siraeum V10Sc8a] Length = 441 Score = 69.2 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 16/159 (10%) Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 + Q P F ++S +++ R A L+ + + Sbjct: 234 LQVYEQYPDTFKESNILSDNVKDRLAA-------LSHNMMFCGLNFGSTPKLAFEPLIII 286 Query: 491 GIWPIIMSL-----SMFIQMKMSPPPADKG---QAMILNWMPVVFVFALSSFPAGLIIYW 542 I+ ++SL S ++ K +P A+ G ++L MP+ ++ S PAG+ YW Sbjct: 287 PIFAFVLSLVQTVLSQYLNKKNNPEMANAGGAGMKVMLYIMPLFSLWISFSVPAGVGFYW 346 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + IVQ V+ K++ E L + + Sbjct: 347 GVNYALGIVQSLVMQKLYSPE-KLRAEAEEKMKERKLKE 384 Score = 51.1 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 M Y L+ NFG AI++ TV VK+ PL KQ + A + PK+ E+++K++ + + Sbjct: 1 MWPIYLLLQNFGWAILIFTVIVKIAMLPLQIKQQKNMAFSQLFAPKVKEIQQKYRNNRDK 60 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 Q +Q + NP GC P++L + + F + V+ Sbjct: 61 --QAEEMQKLQAQGYNPAGGCGPLVLTMVILFGVIDVVY 97 >gi|12045323|ref|NP_073134.1| putative inner membrane protein translocase component YidC [Mycoplasma genitalium G37] gi|255660033|ref|ZP_05405442.1| putative inner membrane protein translocase component YidC [Mycoplasma genitalium G37] gi|1723167|sp|P47702|OXAA_MYCGE RecName: Full=Membrane protein oxaA gi|3845059|gb|AAC72484.1| membrane protein, putative [Mycoplasma genitalium G37] gi|166078750|gb|ABY79368.1| membrane protein, putative [synthetic Mycoplasma genitalium JCVI-1.0] Length = 385 Score = 69.2 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 93/256 (36%), Gaps = 33/256 (12%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I + + L N +++++ + V+L+ + ++ M +Q Sbjct: 124 PAAQIVLPIMYATRVPLGSGVELGFNMILSLIVLLLLVRLITIVITLNSTLALEKMNEVQ 183 Query: 394 PKIDELREKFKQ----SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K+ E+ K+K + Q ++ LYK HNI A + + +P+F IY+ I Sbjct: 184 GKLAEINAKYKGAIDLQSKRNRQLEIMSLYKKHNIKSSAAFVQVFVTLPIFLIIYR-IVT 242 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-- 507 +L A DL+ T IF+ F + F+ + + P+ F+ K+ Sbjct: 243 TLRPIKAIILFNFWDLSKVPLTEIFSNFTTTGWPFIIFLVI-VLPV-----QFLSQKLPQ 296 Query: 508 ------SPPPADKGQA---------MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + Q + VF + AG+ +YW + + +++Q Sbjct: 297 VWASKRNENAKAHSQKSIEQLNKTKKMQLIFYFVFAAITAFSAAGVGVYWFLNALFTLLQ 356 Query: 553 QA-----VIMKMHGAE 563 ++ + + Sbjct: 357 SYLTHVFIVKRREKRK 372 >gi|312874173|ref|ZP_07734207.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2052A-d] gi|311090243|gb|EFQ48653.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LEAF 2052A-d] Length = 319 Score = 69.2 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 G + +I + V N G AI++ T ++L+ PL Sbjct: 35 VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94 Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 + Q + + K + L + +++YK +N++ + GC P+L+Q+P+ Sbjct: 95 QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + + F G + P + + I+ Sbjct: 155 MGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192 Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 IQ +S + Q + P++ + + L +Y+ ++ ++QQ + Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + + +K+ + Sbjct: 252 TFILM--PKVRADVDKELAKHPIKE 274 >gi|259500535|ref|ZP_05743437.1| membrane protein OxaA [Lactobacillus iners DSM 13335] gi|302191225|ref|ZP_07267479.1| preprotein translocase subunit YidC [Lactobacillus iners AB-1] gi|309810155|ref|ZP_07704000.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners SPIN 2503V10-D] gi|259167919|gb|EEW52414.1| membrane protein OxaA [Lactobacillus iners DSM 13335] gi|308169427|gb|EFO71475.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners SPIN 2503V10-D] Length = 319 Score = 69.2 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 G + +I + V N G AI++ T ++L+ PL Sbjct: 35 VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94 Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 + Q + + K + L + +++YK +N++ + GC P+L+Q+P+ Sbjct: 95 QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + + F G + P + + I+ Sbjct: 155 IGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192 Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 IQ +S + Q + P++ + + L +Y+ ++ ++QQ + Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + + +K+ + Sbjct: 252 TFILM--PKVRADVDKELTKHPIKE 274 >gi|19075829|ref|NP_588329.1| mitochondrial inner membrane protein Cox18 [Schizosaccharomyces pombe 972h-] gi|38372431|sp|O94587|COX18_SCHPO RecName: Full=Mitochondrial inner membrane protein cox18; AltName: Full=Sp3; AltName: Full=cox18sp+; Flags: Precursor gi|3790260|emb|CAA21449.1| mitochondrial inner membrane protein Cox18 [Schizosaccharomyces pombe] Length = 202 Score = 69.2 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 74/201 (36%), Gaps = 29/201 (14%) Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + + P+A + +QP I E +++ + + + +LYK N + Sbjct: 21 MAIFLRSTITLPIAIASLKTARRFVQVQPLIKEAKKRCRTNTD--FRTVRKKLYKRFNCH 78 Query: 426 PLAGCWPILLQIPVF----FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILP 481 PL + Q+P+F + + + + + E W DL DP Sbjct: 79 PLMIYALPITQLPLFAFASYQLRQAVDVCPESMSTEGMLWFTDLTLPDP----------- 127 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILN---WMPVVFV-FALSSFPAG 537 G+ P +++++ M + P+D I N M FV F Sbjct: 128 --------HGVLPAVLAVTYLTNMSILKRPSDSRLLKIFNTAGIMSAFFVSFMAFKTSTA 179 Query: 538 LIIYWSWSNVISIVQQAVIMK 558 L +YW+ S + S+VQ + K Sbjct: 180 LSLYWTTSAIYSLVQNVALRK 200 >gi|328948290|ref|YP_004365627.1| membrane protein insertase, YidC/Oxa1 family [Treponema succinifaciens DSM 2489] gi|328448614|gb|AEB14330.1| membrane protein insertase, YidC/Oxa1 family [Treponema succinifaciens DSM 2489] Length = 894 Score = 69.2 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 87/211 (41%), Gaps = 16/211 (7%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS-PPQVLQKAMI 416 N G+A++ ++ V L PL + IQ + ++ K+ + Sbjct: 29 NNHGLAVIGLSIVVTLCTLPLYMVAEQWQEKEREIQENLKPGTKRIKKFFKGDEQYMILT 88 Query: 417 QLYKTHNINPLAGC---WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 YK ++ +PL + +L+QIP F A Y +S ++ + +IKD D T Sbjct: 89 TFYKQNHYHPLMALRSSFSLLIQIPFFIAAYTFLSHLEALKGVS-FLFIKDFGNPDATFK 147 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 F ++ + PI M+L I + + + + VF+ L + Sbjct: 148 IGSF-----------YINVLPIAMTLINCISGALYSKGHGINEKIQIFGCAAVFLLLLYN 196 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 PAGL++YW+ +N+ S+V+ + ++ Sbjct: 197 SPAGLVVYWTMNNIFSLVKNIFYKLKNPKKV 227 >gi|322698078|gb|EFY89851.1| OXA1-like protein [Metarhizium acridum CQMa 102] Length = 603 Score = 68.9 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 37/292 (12%), Positives = 84/292 (28%), Gaps = 40/292 (13%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 SK + + + + + + S + + ++ E+ Sbjct: 187 SKPETTTTTSEAVRPVDPTPENDVPSPPTEPAVPASEVDLSSISDIVNGQDILNMSEQ-- 244 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYV 384 + + + M + + + +G +IM T V ++ + F + Sbjct: 245 --IGYLKALGLDFGTGPTSVMQWALEHVHIYSGLGWGASIMATAVLLRCIMFYPQIRSLK 302 Query: 385 STANMKNIQPKIDELREK--------FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQ 436 A M+N++ + + + + + ++ K G Q Sbjct: 303 FNAVMQNLRKDPRSQEAMKLVQQGFANQDNEMRQKGQYLNKMLKEQYGVNNWGMLWSFGQ 362 Query: 437 IPVFFAIYK----VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 IP F +++ + ++ + + W DL A DP I G + VG Sbjct: 363 IPFTFGLFRIVSGMANVPVPAMETAGYLWFTDLTATDPYFILPAAG-------TALMVGA 415 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS----SFPAGLII 540 I + + Q +L M VF A + + Sbjct: 416 LAI------------NAKHTPESQKKMLKTMTYVFGVVGFIGTTFLSAAVNL 455 >gi|326328925|ref|ZP_08195256.1| membrane protein insertase, YidC/Oxa1 family [Nocardioidaceae bacterium Broad-1] gi|325953268|gb|EGD45277.1| membrane protein insertase, YidC/Oxa1 family [Nocardioidaceae bacterium Broad-1] Length = 270 Score = 68.9 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 79/236 (33%), Gaps = 22/236 (9%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + +A + + ++L + ++ + A + + + Sbjct: 20 HVLASVGPNVSWLLAIAAVVVLVRLVLLPLAIRGVRHAHASARARPQLQALTKKYQKKSA 79 Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 + Q+ + + ++ + H + P Q+P+F A+Y ++ S R P Sbjct: 80 KGSASQADMMAMMEERRKINEEHGV-PRFAMLAAFAQLPIFLALYHLL--SDVSRSNP-V 135 Query: 460 GWIKDLAAADPTNIFTLFGI-------LPFYLPGFMHVGIWPIIMSLSMFIQMKM----S 508 G + D + D T G L + + ++ ++ + Sbjct: 136 GAMND-SLVDSLGAATFLGTPLTGHGYLSGDTTHLVITLGLAATAAAVSYLSQRLWVLPN 194 Query: 509 PPPAD-KGQA-MILNWMPVV----FVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 D I MPV+ + A S+ P L++YW S + + Q AVI + Sbjct: 195 MVRTDVPESMLRIQELMPVISAGGMLLAGSTVPLALLVYWVVSGLWTAGQAAVIHR 250 >gi|291520343|emb|CBK75564.1| Preprotein translocase subunit YidC [Butyrivibrio fibrisolvens 16/4] Length = 308 Score = 68.9 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 55/138 (39%), Gaps = 8/138 (5%) Query: 440 FFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 F + +I+ + + ++ +++ I + + + + P++ L Sbjct: 93 FSGLTDLINNTHAALDKVNYLFVLNISETPVNLIKSAWTSDSKNFGIIICALLIPVVSYL 152 Query: 500 SMFIQMKMSPPPAD------KGQAMIL-NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 S + +K++P + Q + MP++ +F + P GL IYW ++ +Q Sbjct: 153 SQMLNIKLTPTSTEGQSEQMAQQMKTMNLMMPLMSLFIAFTVPVGLGIYWIAGAIVRSIQ 212 Query: 553 QAVIMKMHGAEIGLIDRL 570 + K H +I L + Sbjct: 213 MVFLNK-HFEKIDLESII 229 >gi|332372488|gb|AEE61386.1| unknown [Dendroctonus ponderosae] Length = 332 Score = 68.9 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 82/206 (39%), Gaps = 22/206 (10%) Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMI-QLYKTHNINPLAGCWPILLQIPVFFAI 443 + N+ K+ + E+ ++ + K +L N +P + QIP++ ++ Sbjct: 121 ELRHETNVAVKLFKWDERTAKAAFKATMKQQWNRLVVRDNCHPFKTTVLLWFQIPLWVSL 180 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTL--FGILPFYLPGFMHVGIWPIIMSLSM 501 S+ R+ + + DLAA + + FG +P L I+P+ + ++ Sbjct: 181 ------SVSWRNLTYMLPVPDLAAQITYSELAVGGFGFIP-NLTVPDASWIFPVALGVAN 233 Query: 502 FIQMKM-----SPPPADKGQA---MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +++ + P + Q + + VV V +S P+ L +YW+ S+ +VQ Sbjct: 234 LAIIELQLLSRTSGPRSRTQTVITNVFRVLSVVMVPIAASVPSCLALYWTTSSAYGLVQN 293 Query: 554 AVIM----KMHGAEIGLIDRLRSTFS 575 V++ K ++ + Sbjct: 294 LVLLSPRAKRLFKVPETSVEVKEPYK 319 >gi|198432211|ref|XP_002129737.1| PREDICTED: similar to GG13956 [Ciona intestinalis] Length = 425 Score = 68.9 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 59/222 (26%), Gaps = 21/222 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + ++ + +G I + L A + S + Sbjct: 139 WDWPHHWIQSMLEFLNVQLGVPWIPAIAIATLTLRLLALPAYIRMRSFIARSHNSQPEQM 198 Query: 399 L-----REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + + Q + + NINP+ L F + + + + Sbjct: 199 RLQAAAKSATSKLEQQRKMLEYMDFLREKNINPVKALLYQLPIGITFLSFFSAMRGMTQA 258 Query: 454 RHAPFW----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 + W DL DP + YL ++ P Sbjct: 259 KVPSLMEGGALWFTDLTIVDPYFLLPTLSCTSLYLLFRFGGAA------------TEVGP 306 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ + P V + L P+ + I+W SN S Sbjct: 307 MAEVPFMRKVILYSPFVMLPFLVYQPSIMFIFWITSNTFSFF 348 >gi|87304138|ref|ZP_01086681.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 5701] gi|87281451|gb|EAQ73515.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 5701] Length = 366 Score = 68.9 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517 I LAA G + FY G ++ I ++ L++F+ +S PA+ QA Sbjct: 222 IPGLAARSGFLFIKALGQVGFYADGAINWDIAILVGGFGLTLFLSQLLSGMGMPANPQQA 281 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 PV+ FP AG+++Y +N+ +Q ++ K Sbjct: 282 TANKITPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFILTK 324 Score = 50.0 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 4/102 (3%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF---KQSPP 408 +FY LV ++G+AI+ T+ +++ +PL+ S M+ QP + + + S P Sbjct: 2 FFYGLVPSYGLAIVALTLVIRVALYPLSAGSIRSARRMRIAQPVMQKRQADIKARYASNP 61 Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 Q Q+ + ++ K +PLAGC P+L+Q+P+ FA++ + S Sbjct: 62 QKQQEELGKVMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 102 >gi|118090244|ref|XP_420604.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 364 Score = 68.9 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 63/176 (35%), Gaps = 23/176 (13%) Query: 385 STANMKNIQPKIDELREKFKQSP-PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +++ K EK + + L++ + +LY N +P + +QIP++ + Sbjct: 112 QLRYEVSVRGKQMGWSEKVARFHFKKKLRRIITELYIRDNCHPFKATLLVWVQIPMWVCV 171 Query: 444 YKVISI---------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 + E W DL A D T I + +G+ Sbjct: 172 SLALRNCSVGALDSEVQEQFSTGGTLWFTDLTAPDSTWIMP------------VSLGLLN 219 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ + +F K+ K + VV + ++ P+ + +YW S+ + + Sbjct: 220 LL-IVEIFASQKLEASRFQKLATNFFRVLSVVMIPIAATVPSSMALYWLSSSFMGL 274 >gi|88807549|ref|ZP_01123061.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 7805] gi|88788763|gb|EAR19918.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 7805] Length = 382 Score = 68.5 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 7/125 (5%) Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKG 515 G I LAA G + FY G ++ + I LS+FI +S PA+ Sbjct: 234 GKIPGLAARSGFLFIKALGQVGFYTEGAINWDIAILVGAFGLSLFISQLLSGMGMPANPQ 293 Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 QA PV+ FP AG+++Y +N+ +Q ++ + L L Sbjct: 294 QATANKITPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFLLTR-ETLPDNLQAILDDQ 352 Query: 574 FSKNY 578 + Sbjct: 353 MKQAQ 357 Score = 53.1 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + + + + Sbjct: 8 NLLLPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67 Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 K PQ Q+ + +L K +PLAGC P+L+Q+P+ FA++ + S Sbjct: 68 KARFASNPQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116 >gi|225619520|ref|YP_002720777.1| 60 kDa inner membrane protein [Brachyspira hyodysenteriae WA1] gi|225214339|gb|ACN83073.1| 60 kDa inner membrane protein [Brachyspira hyodysenteriae WA1] Length = 997 Score = 68.5 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 93/236 (39%), Gaps = 26/236 (11%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVS 385 F++ + + + + ++G+++ L ++ + L PL Q Sbjct: 4 FDIFYNIIIYPIEFIIEILFYLFSVEFKSSYGVSLFLLSLCINFLSLPLYNIAESWQAKE 63 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A ++P ID ++ +K +L + ++ I G +L+QIP F A Y Sbjct: 64 RAIQDKMKPMIDNIKAVYKGDQRYLLIRTCQRINGYKTIYAFRGTLGLLIQIPFFMAAYN 123 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-- 503 + + + +IKDL+ D G + + + P +M+L + Sbjct: 124 FVHSLTGLSGQS-FLFIKDLSKPDALIH-----------IGNISINLLPFLMTLFSLLAG 171 Query: 504 ---QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 K+ + L + ++F+ L + P+GL+ YW+ + + S ++ +I Sbjct: 172 FVYSRKLKFKESLP-----LYIVSLIFLLLLYNSPSGLLFYWTINCLFSFIKNIII 222 >gi|325912572|ref|ZP_08174955.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners UPII 60-B] gi|325477993|gb|EGC81122.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners UPII 60-B] Length = 319 Score = 68.5 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 93/265 (35%), Gaps = 44/265 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 G + +I + V N G AI++ T ++L+ PL Sbjct: 35 VGPYAWIYNLFGHPLQNIMLHVSNLLGGTNGAGWAIIIITFVIQLIVLPLRLSSQSKMIK 94 Query: 389 MKNI------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVF 440 + Q + + K + L + +++YK +N++ + GC P+L+Q+P+ Sbjct: 95 QQEKTKRLQPQLSLIQAAMKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIM 154 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 IY+ ++ S + + F G + P + + I+ Sbjct: 155 MGIYQAVAYSKTLASSSFMG-------------------ISLSKPSIVFAVVAAILY--- 192 Query: 501 MFIQMKMSPPPADKGQAMILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 IQ +S + Q + P++ + + L +Y+ ++ ++QQ + Sbjct: 193 -LIQGYLSLIGISEQQKQTMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIA 251 Query: 557 MKMHGAEIGLIDRLRSTFSKNYNSQ 581 + + + +K+ + Sbjct: 252 TFILM--PKVRADVDKELTKHPIKE 274 >gi|257784091|ref|YP_003179308.1| 60 kDa inner membrane insertion protein [Atopobium parvulum DSM 20469] gi|257472598|gb|ACV50717.1| 60 kDa inner membrane insertion protein [Atopobium parvulum DSM 20469] Length = 679 Score = 68.5 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 88/224 (39%), Gaps = 26/224 (11%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +A +++ Y+L G++ AI L T K++ PLA ++ M + P+ Sbjct: 1 MEQLAHVFSLIVQPAYDLTGSWWAAIFLFTFATKIILMPLALWTQQNSIVMVRLMPETFR 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 L+ ++ +++ +L K +PL P+ +Q+ + F + VI Sbjct: 61 LKTRYFGDKET-IEERSNELNKKAGYHPLLSLIPLAIQVVILFGLVDVIHG--------- 110 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPP--A 512 I D A + G+ P G I P+ +LS K++P Sbjct: 111 ---ITDSGAPGTEFL----GMTPIIDGGI--TWIMPLAAALSSVALGLASNKLNPLQREQ 161 Query: 513 DKGQAMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + + N + + + + G+ YW SN++SI+ Q V Sbjct: 162 SRAEKNTTNGLSIAMSLVLAVYVVCGMAFYWVCSNLLSILVQIV 205 >gi|325473999|gb|EGC77187.1| inner membrane protein [Treponema denticola F0402] Length = 521 Score = 68.5 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 104/242 (42%), Gaps = 19/242 (7%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK-KQYVSTAN 388 M+ + + F+ F+ + + +G + + + + L + +A+ Q Sbjct: 5 LYMIFIYPVYMFVEFVFFLANNITDDYIGASIVLLSIIVNIICLPIYNVAETWQKKERDI 64 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 K ++PK ++R F ++ A + H + L G +P+L+QIP FFA YK++S Sbjct: 65 QKKLKPKTKDIRAVFSGDERYMILSAYYRQNNYHPLYALRGIFPLLIQIPFFFAAYKLLS 124 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 + +A + ++KDL D G +++ PI+M++ + Sbjct: 125 NLPLLNNAS-FWFLKDLGKPDQ-----------LLNIGGIYINFLPILMTIINISASAVY 172 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 + + L VF+ L + P+GL++YW+ +N+ S++ K + L Sbjct: 173 SKGLSLKEKIQLYLTAAVFLILLYNSPSGLVLYWTLNNLFSLL------KNIFYRVRLDK 226 Query: 569 RL 570 R+ Sbjct: 227 RI 228 >gi|71894609|ref|YP_278717.1| putative inner membrane protein translocase component YidC [Mycoplasma synoviae 53] Length = 629 Score = 68.5 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 110/329 (33%), Gaps = 55/329 (16%) Query: 277 YLSDGHARYQAKFSANEITILPGK-SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 Y + + FS+++ ++ + + + + + P + Sbjct: 314 YKKETVENFAIDFSSSKNFLVDDALKYNADSNILDTRTDEKELLGSGGTVQNPVTDWGQS 373 Query: 336 WGWFYFIAKPMFMLMSYFYNLV--------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 W + F ++ + + + IAI++ + +L + K + + Sbjct: 374 WQYGPFYGLIVYPFSALINAITNSLPSLDGWSSIIAILVLVLLTRLFSLFITFKATIVQS 433 Query: 388 NMKNIQPKIDELREKFKQSPP-----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 ++++ K + K+K QK + LYK +NIN L G P L+ +P+FFA Sbjct: 434 AQEDLRVKKAAIENKYKGFENNKQMKMRKQKEIADLYKKNNINVLDGFLPQLVAMPIFFA 493 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-YLPGFMHVGIWPIIMSLSM 501 +++ I + T + FG + + + +W II+ + + Sbjct: 494 MWRAIQAVP--------------SIKATTWLGINFGATSWREVIAGNFIYLWIIIVVVII 539 Query: 502 FIQMKMSP-----------PPADKGQA-----MILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++ P + QA +VF F F AG+ +YW ++ Sbjct: 540 QFTSQLIPHWLNKKRLKERTTVAEVQALKKSERYQTIFIIVFTFMAIIFTAGVQVYWLFT 599 Query: 546 NVISIVQ----------QAVIMKMHGAEI 564 + Q Q K + Sbjct: 600 GIWQTFQVIGLHKLRKTQWFKNKYSRKKP 628 >gi|328854069|gb|EGG03204.1| hypothetical protein MELLADRAFT_117386 [Melampsora larici-populina 98AG31] Length = 496 Score = 68.5 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 68/210 (32%), Gaps = 32/210 (15%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV---L 411 I I+ + + + + I +I ++E + Q Sbjct: 206 PWFLTIPIVILSLRTVLIPINIWSMQIGVRNMRVKPKIDEQIQVIKELQTKGEQQKAFMK 265 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-------GWIKD 464 Q + L K PLA L+Q +F + + + EM + + W D Sbjct: 266 QNELRALMKAEGFRPLAPLGLPLVQGSLFVSFFWALR---EMGNHHLFSLTQEGALWFTD 322 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L P+Y + G+ ++S+ +M + ++ ++ Sbjct: 323 LTV-----------GGPWYGLPLIASGLT--LLSVETAAEMGGMKAGQSE---KVMWFLR 366 Query: 525 VVFV---FALSSFPAGLIIYWSWSNVISIV 551 V + + P+ + +YW +N S++ Sbjct: 367 AVILGTLWLFYDLPSAVFLYWCTNNFFSLL 396 >gi|255028799|ref|ZP_05300750.1| SpoIIIJ protein [Listeria monocytogenes LO28] Length = 90 Score = 68.5 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%) Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 +K AMI+ MPV+ +F + P+ L +YW N+ ++ Q +I + Sbjct: 2 QTQQNKSMAMIVYIMPVMILFMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKRE 58 >gi|144575191|gb|AAZ44006.2| conserved hypothetical protein [Mycoplasma synoviae 53] Length = 652 Score = 68.5 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 110/329 (33%), Gaps = 55/329 (16%) Query: 277 YLSDGHARYQAKFSANEITILPGK-SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLID 335 Y + + FS+++ ++ + + + + + P + Sbjct: 337 YKKETVENFAIDFSSSKNFLVDDALKYNADSNILDTRTDEKELLGSGGTVQNPVTDWGQS 396 Query: 336 WGWFYFIAKPMFMLMSYFYNLV--------GNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 W + F ++ + + + IAI++ + +L + K + + Sbjct: 397 WQYGPFYGLIVYPFSALINAITNSLPSLDGWSSIIAILVLVLLTRLFSLFITFKATIVQS 456 Query: 388 NMKNIQPKIDELREKFKQSPP-----QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 ++++ K + K+K QK + LYK +NIN L G P L+ +P+FFA Sbjct: 457 AQEDLRVKKAAIENKYKGFENNKQMKMRKQKEIADLYKKNNINVLDGFLPQLVAMPIFFA 516 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-YLPGFMHVGIWPIIMSLSM 501 +++ I + T + FG + + + +W II+ + + Sbjct: 517 MWRAIQAVP--------------SIKATTWLGINFGATSWREVIAGNFIYLWIIIVVVII 562 Query: 502 FIQMKMSP-----------PPADKGQA-----MILNWMPVVFVFALSSFPAGLIIYWSWS 545 ++ P + QA +VF F F AG+ +YW ++ Sbjct: 563 QFTSQLIPHWLNKKRLKERTTVAEVQALKKSERYQTIFIIVFTFMAIIFTAGVQVYWLFT 622 Query: 546 NVISIVQ----------QAVIMKMHGAEI 564 + Q Q K + Sbjct: 623 GIWQTFQVIGLHKLRKTQWFKNKYSRKKP 651 >gi|33240751|ref|NP_875693.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|38502917|sp|Q7VB00|OXAA_PROMA RecName: Full=Inner membrane protein oxaA gi|33238279|gb|AAQ00346.1| Preprotein translocase subunit YidC [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 382 Score = 68.5 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 7/128 (5%) Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKG 515 G I LAA G + FY+ G ++ + I L++ I +S P + Sbjct: 234 GKIPGLAAKSGFLFIKALGQVGFYVDGAINWDIAILVAGFGLTLVISQVLSGQGMPPNPQ 293 Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 QA P++ FP AG+++Y +N+ Q ++ K L L Sbjct: 294 QATAQKITPIMITGMFLFFPLPAGVLLYMVIANMFQAFQTFLLNK-EALPENLQKILDDQ 352 Query: 574 FSKNYNSQ 581 + Sbjct: 353 IKNQGKKE 360 Score = 50.8 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY L ++GIAI+ T+ +++ FPL+ S MK QP + + + + Sbjct: 8 NLLIPILDFFYGLFHSYGIAIVALTIVIRIALFPLSAGSIRSARRMKIAQPVMQKRQAEI 67 Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 K + P+ Q + +L +PLAGC P+L+Q+P+ FA++ + S Sbjct: 68 KSRYANDPKKQQDELGKLMGEFG-SPLAGCLPLLVQMPILFALFATLRGS 116 >gi|145512888|ref|XP_001442355.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409708|emb|CAK74958.1| unnamed protein product [Paramecium tetraurelia] Length = 363 Score = 68.5 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 93/254 (36%), Gaps = 44/254 (17%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR--- 400 +L+ +L G I+ ++ +K+ F PL ++ MK I+P+ + Sbjct: 59 YSRELLLYLANDLSWGMGWGILAISMGIKIAFTPLMFSAQLNACRMKLIEPESKNFQNMI 118 Query: 401 ---EKFKQSPPQVLQKAMIQLYK-THNINPLAGCWPILLQIPVFFAIYKVISIS------ 450 + + + +L+K HNIN L IL Q+P F + + Sbjct: 119 QRAMRAQDFKASRAAQKQFKLFKRKHNINMLIPGLSIL-QMPFLFTWFLSLRYVCSLPDK 177 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 E + + W +DL+ DP GI PI+ S+ F + ++P Sbjct: 178 YEDLKSQGFLWFQDLSEYDPY-------------------GILPIMSSVFTFWNISLNPN 218 Query: 511 PADKGQ------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV-----IMKM 559 + + ++P + + FPAG+ +YW S ++ A+ I K+ Sbjct: 219 MQSQSTVPFAKYYRYVRFLPFFSIPVVIFFPAGVNLYWCSSAFCHLIITALARQEKIRKI 278 Query: 560 HGAEIGLIDRLRST 573 G L L Sbjct: 279 FGIPKYLPGTLLER 292 >gi|87123705|ref|ZP_01079555.1| Putative inner membrane protein; similar to 60 kDa inner membrane protein family protein [Synechococcus sp. RS9917] gi|86168274|gb|EAQ69531.1| Putative inner membrane protein; similar to 60 kDa inner membrane protein family protein [Synechococcus sp. RS9917] Length = 381 Score = 68.5 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 6/105 (5%) Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKG 515 G I LAA G + FY G ++ + I LS+F +S PA+ Sbjct: 234 GKIPGLAARSGFLFIKALGQVGFYTDGAINWDIAILVGAFGLSLFASQLLSGMGMPANPQ 293 Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 QA PV+ FP AG+++Y +N+ +Q ++ + Sbjct: 294 QATANKITPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFLLTR 338 Score = 54.6 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + + + + Sbjct: 8 NLLIPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67 Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 K + PQ Q+ + +L K +PLAGC P+L+Q+P+ FA++ + S Sbjct: 68 KSRFANNPQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116 >gi|317970543|ref|ZP_07971933.1| putative inner membrane protein translocase component YidC [Synechococcus sp. CB0205] Length = 378 Score = 68.5 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517 I LAA G + FY G ++ I ++ +++F+ +S PA+ QA Sbjct: 236 IPGLAARSGFLFIKALGQVGFYTDGAINWDIAILVGGFGVTLFLSQILSGMGMPANPQQA 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 PV+ FP AG+++Y +NV VQ ++ + Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVIANVFQAVQTFLLTR 338 Score = 53.8 bits (127), Expect = 7e-05, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ TV ++L FPL+ + M+ QP + + + + Sbjct: 8 NLLLPILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRNARRMRIAQPVMQKRQAEI 67 Query: 404 ---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + PQ Q+ + L K +PL+GC P+L+Q+P+ FA++ + S Sbjct: 68 KAKYANNPQKQQEELGSLMKEFG-SPLSGCLPLLVQMPILFALFATLRGS 116 >gi|116072768|ref|ZP_01470034.1| putative inner membrane protein translocase component YidC [Synechococcus sp. BL107] gi|116064655|gb|EAU70415.1| putative inner membrane protein translocase component YidC [Synechococcus sp. BL107] Length = 380 Score = 68.1 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517 I LAA G + FY G ++ I ++ L++F+ +S PA+ QA Sbjct: 236 IPGLAARSGFLFIKALGQVGFYADGAINWDIAILVGGFGLTLFLSQLLSGMGMPANPQQA 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 PV+ FP AG+++Y +N+ +Q ++ K Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFILTK 338 Score = 51.9 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ T+ +++ +PL+ S M+ QP + + + Sbjct: 8 NLLIPILDFFYGLVPSYGLAIVALTLVIRVALYPLSAGSIRSARRMRIAQPVMQKRQADI 67 Query: 404 ---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 S PQ Q+ + ++ K +PLAGC P+L+Q+P+ FA++ + S Sbjct: 68 KARYASNPQKQQEELGKVMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116 >gi|78185353|ref|YP_377788.1| putative inner membrane protein translocase component YidC [Synechococcus sp. CC9902] gi|78169647|gb|ABB26744.1| putative inner membrane protein; similar to 60 kDa inner membrane protein family [Synechococcus sp. CC9902] Length = 380 Score = 68.1 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517 I LAA G + FY G ++ I ++ L++F+ +S PA+ QA Sbjct: 236 IPGLAARSGFLFIKALGQVGFYADGAVNWDIAILVGGFGLTLFLSQLLSGMGMPANPQQA 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 PV+ FP AG+++Y +N+ +Q ++ K Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFILTK 338 Score = 52.3 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ T+ +++ +PL+ S M+ QP + + + Sbjct: 8 NLLIPILDFFYGLVPSYGLAIVALTLVIRVALYPLSAGSIRSARRMRIAQPVMQKRQADI 67 Query: 404 ---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 S PQ Q+ + ++ K +PLAGC P+L+Q+P+ FA++ + S Sbjct: 68 KARYASNPQKQQEELGKVMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116 >gi|33866422|ref|NP_897981.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 8102] gi|38502911|sp|Q7U522|OXAA_SYNPX RecName: Full=Inner membrane protein oxaA gi|33633200|emb|CAE08405.1| Putative inner membrane protein; similar to 60 kDa inner membrane protein family [Synechococcus sp. WH 8102] Length = 380 Score = 68.1 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517 I LAA G + FY G ++ I ++ L++F+ +S PA+ QA Sbjct: 236 IPGLAARSGFLFIKALGQVGFYADGDINWDIAILVGGFGLTLFLSQLLSGMGMPANPQQA 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 PV+ FP AG+++Y +N+ +Q ++ + Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFLLTR 338 Score = 52.3 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 62/110 (56%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ T+ +++ +PL+ S M+ QP I + + + Sbjct: 8 NLLIPILDFFYGLVPSYGLAIVALTIVIRVALYPLSAGSIRSARRMRIAQPVIQKRQAEI 67 Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 K + Q Q+ + ++ K +PLAGC P+L+Q+P+ FA++ + S Sbjct: 68 KSRYANNLQKQQEELGKVMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116 >gi|76153368|gb|AAX25001.2| SJCHGC08195 protein [Schistosoma japonicum] Length = 172 Score = 67.7 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 21/128 (16%) Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-AD 513 + W DL A+DP I LPF + + F +P P Sbjct: 1 QSGGIAWFTDLTASDPYYI------LPFLSMSTLLLV----------FETGAETPSPHIQ 44 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM----KMHGAEIGLIDR 569 ++ P++ + + P+ L+ YW+ SN++S +Q ++ + + + Sbjct: 45 PVVRTVMRVFPIIGFVFVVNMPSALVWYWTVSNMLSFLQSLILRYPPFRSYFNLPPVRAP 104 Query: 570 LRSTFSKN 577 L K Sbjct: 105 LSVVNKKR 112 >gi|148240237|ref|YP_001225624.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 7803] gi|147848776|emb|CAK24327.1| Preprotein translocase subunit YidC [Synechococcus sp. WH 7803] Length = 383 Score = 67.7 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 6/105 (5%) Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKG 515 G I LAA G + FY G ++ + I LS+FI +S PA+ Sbjct: 234 GKIPGLAARSGFLFIKALGQVGFYTEGSINWDIAILVGAFGLSLFISQLLSGMGMPANPQ 293 Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 QA PV+ FP AG+++Y +N+ +Q ++ + Sbjct: 294 QATANKITPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFLLTR 338 Score = 53.1 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + + + + Sbjct: 8 NLLLPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67 Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 K PQ Q+ + +L K +PLAGC P+L+Q+P+ FA++ + S Sbjct: 68 KARFASNPQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116 >gi|78212127|ref|YP_380906.1| putative inner membrane protein translocase component YidC [Synechococcus sp. CC9605] gi|78196586|gb|ABB34351.1| putative inner membrane protein; similar to 60 kDa inner membrane protein family [Synechococcus sp. CC9605] Length = 376 Score = 67.7 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKGQA 517 I LAA G + FY G ++ + I +++FI +S PA+ QA Sbjct: 236 IPGLAARSGFLFIKALGQVGFYADGAINWDIAILVAGFGITLFISQLLSGMGMPANPQQA 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 PV+ FP AG+++Y +N+ +Q ++ K Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMLIANIFQGLQTFILTK 338 Score = 51.5 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ T+ +++ +PL+ S M+ QP I + + + Sbjct: 8 NLLIPILDFFYGLVPSYGLAIVALTLVIRIALYPLSAGSIRSARRMRIAQPVIQKRQAEI 67 Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + PQ LQ+ + + K +PLAGC P+L+Q+P+ FA++ + S Sbjct: 68 RSRYANNPQKLQEELGNVMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116 >gi|156359942|ref|XP_001625022.1| predicted protein [Nematostella vectensis] gi|156211833|gb|EDO32922.1| predicted protein [Nematostella vectensis] Length = 261 Score = 67.7 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 75/244 (30%), Gaps = 47/244 (19%) Query: 342 IAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLFF-PLAKKQYVSTANMKNIQPKIDEL 399 ++ + I+ TV ++ PLA +Q A ++ +QP + + Sbjct: 1 PIYATQQVLEAIHTWTHLPWWATIIGVTVVLRTCITLPLAIRQNKLVAKIELLQPTLQMM 60 Query: 400 REKFKQSP------------------PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 E K + ++ M +LY+ NP+ +Q+P++ Sbjct: 61 TEALKHREAVECKRAGKTVEEFEKRFKKKQRRMMYELYQGEGCNPIKMFLLPWIQLPLWI 120 Query: 442 AIYKVISIS-------------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 I + EM W DL DPT + L + Sbjct: 121 LISLSLRSMTGTSYSQRNSVLCPEMASEGA-LWFPDLLVPDPTIMIPLAVGI-------- 171 Query: 489 HVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 + ++ M + P + L + V V S P + +YW+ S Sbjct: 172 -----CNLTNIEMHALRRQQPSRFQRVMTNTLRLLSVFMVMFASQVPTAMSLYWAVSAGF 226 Query: 549 SIVQ 552 + Q Sbjct: 227 GVCQ 230 >gi|58699428|ref|ZP_00374178.1| 60 kd inner-membrane protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58534053|gb|EAL58302.1| 60 kd inner-membrane protein [Wolbachia endosymbiont of Drosophila ananassae] Length = 124 Score = 67.7 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 46/130 (35%), Positives = 75/130 (57%), Gaps = 8/130 (6%) Query: 15 VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM--SPRVE 72 ++I+ +W+ Y N + + + N A ++ +R++ ++ RV Sbjct: 1 MLIMVSWRIIYDNFFSTNQNQP------LIEHIESFNDLAPIIHQNRSEIINSTREQRVS 54 Query: 73 LKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANN 132 L N + GSI+LKGA+FDDL L YHL+ SS+SP V LLSP+ +K+ YFAE ++ +N Sbjct: 55 LTNNMIKGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESKDVYFAEFGWLDPSNR 114 Query: 133 IELPNSNTVW 142 I++P+S VW Sbjct: 115 IKVPDSKAVW 124 >gi|38503150|sp|Q98R58|OXAA_MYCPU RecName: Full=Membrane protein oxaA Length = 397 Score = 67.7 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 99/274 (36%), Gaps = 28/274 (10%) Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF-YFIAKPMFMLMSYFYNLVGNFGIAIM 365 A +F ++ + +A + + W Y+ P + L+ N+ + Sbjct: 108 KSLNNADDFELVYSQGEKIAQSDYGQIPVVTWGEYWNYGPFYALLVAPIASFTNWVASAF 167 Query: 366 LTTVF-----------VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP-----Q 409 + +L F L K S + +Q K ++ K+ Q Sbjct: 168 ESGFGIVFAIIVVVVVTRLFIFGLTFKVTFSQYKQQELQGKKAKIDAKYAAYENNKMMKQ 227 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 QK + LYK HNI+P+ I P+F A+++VI ++ + + + A Sbjct: 228 RKQKEIQDLYKKHNISPIDFVASIAWSSPLFIAVWRVIQSVPVIK--SNFFLGVNFSTAS 285 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--KGQA-----MILNW 522 I + + + + V I I L ++ K A+ + Q+ N Sbjct: 286 YQEILAKNWVYLWVVSLALIVQIISQI--LPRWLAKKKIKERANVYEMQSYKKNNKTQNI 343 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 M +VF+ + AG+ IYW + +I Q + Sbjct: 344 MLIVFMVFTITLQAGVQIYWIIGGLWTIGQTLFV 377 >gi|255657156|ref|ZP_05402565.1| hypothetical protein CdifQCD-2_15996 [Clostridium difficile QCD-23m63] gi|296452006|ref|ZP_06893721.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile NAP08] gi|296879599|ref|ZP_06903578.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile NAP07] gi|296259197|gb|EFH06077.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile NAP08] gi|296429402|gb|EFH15270.1| YidC/Oxa1 family membrane protein insertase [Clostridium difficile NAP07] Length = 216 Score = 67.7 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 17/214 (7%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FI+ + L+S +N G+FGI+I+L T+ VKL+ PL+ KQ S + + K++ Sbjct: 1 MDFISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEH 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++EK+K ++ ++ IQ+ ++ + GC +L+Q+PV +A+Y V + Sbjct: 61 IKEKYKNDTKELEKQ--IQVNSVESMKSMLGCLIVLVQMPVVYALYHVCLDMTKEFTTII 118 Query: 459 WGWIKDLAAADPTNIFT-LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 WI +L D I ++ ++ ++ K++ Q Sbjct: 119 IPWIANLGTFDNLFILPCIYTLIMLASNLVNYIPYL------------KINSQVKFNKQM 166 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ + + P + +Y+ S + S++ Sbjct: 167 AMVT--TITSLILTVRTPVAIGLYFITSAIYSLI 198 >gi|91094029|ref|XP_967706.1| PREDICTED: similar to inner membrane protein COX18, mitochondrial [Tribolium castaneum] Length = 345 Score = 67.7 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 88/264 (33%), Gaps = 43/264 (16%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGN--------FGIAIMLTTVFVKLLFFPLAKK 381 F+ + F + + Y + N + I+ TTV ++ Sbjct: 48 FDSIAKTQSGIFKSLSESAPVEYCQKFLLNVHDTTGLPWWATIICTTVMMRGCVTVPLAI 107 Query: 382 QYVSTA------------------NMKNIQPKIDELREKFKQSPPQVLQKAMIQ-LYKTH 422 I K+ EK + + + Q L + Sbjct: 108 YQNYIMAKLEFVKLEMDEIAQELKKETAIAVKMYNWDEKTARITFKRSIRKQWQGLIQRE 167 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL--FGIL 480 N +P I QIP++ ++ S+ +R+ + +D +A ++ FG + Sbjct: 168 NCHPFKTTLLIFFQIPLWISL------SVSLRNLVYMLPQQDTSAQITFTELSVGGFGWI 221 Query: 481 PFYLPGFMHVGIWPIIMSLS------MFIQMKMS-PPPADKGQAMILNWMPVVFVFALSS 533 P L + PI+ L M K++ P + + +V + S+ Sbjct: 222 P-NLTVVDSSLVLPILFGLLNLAIIEMQTLSKINVPTKLQRYLTNFFRGLSLVMIPVASA 280 Query: 534 FPAGLIIYWSWSNVISIVQQAVIM 557 P+ +++YW+ S+ VQ V++ Sbjct: 281 VPSCVVLYWTTSSAFGFVQNLVLI 304 >gi|167522823|ref|XP_001745749.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776098|gb|EDQ89720.1| predicted protein [Monosiga brevicollis MX1] Length = 384 Score = 67.7 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 73/211 (34%), Gaps = 27/211 (12%) Query: 368 TVFVKLLFFPLAKKQYVSTANMKN---------IQPKIDELREKFKQSPPQVLQKAMIQ- 417 TV + A + Q + E + + L + ++ Sbjct: 123 TVVGAPAAWYQAHWSSRVELQRRRLMQWADAIGHQVMRRKASENLTDAEAENLIQEQVRA 182 Query: 418 ----LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI 473 L P L+Q+P+F + + + A D + Sbjct: 183 QQKVLMDEIGWRRWKLVLPALVQVPIFITVSLALRRL----QDSDSLLFQQYQA-DLASQ 237 Query: 474 FTLFGILPFYLPGFMH-VGIWPIIMSLSMFIQMKMSPP--PADKGQA-----MILNWMPV 525 L+ LP+ H + + P+++ ++ + +++S P L ++ + Sbjct: 238 GPLWHSLPWTASLTEHDILLLPLVLGITNWFTLELSTIKRPVSPESREDRLGTALRYLAI 297 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + ++ P+GL +YW+ S+V+++ Q ++ Sbjct: 298 AMIPVAAAVPSGLSLYWASSSVLTLTQNLML 328 >gi|312221618|emb|CBY01558.1| similar to mitochondrial export translocase Oxa1 [Leptosphaeria maculans] Length = 606 Score = 67.3 bits (162), Expect = 6e-09, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 85/237 (35%), Gaps = 38/237 (16%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + + +F M + L G I+L V V+ L F + A M +++P Sbjct: 232 YGWGVTTVFERMIEYMYLTTGLGWGASIVLACVAVRSLTFYFQVRNSDKMAVMASMKPIT 291 Query: 397 DELREKFKQSPPQVLQKA--MIQLYKTHNINPLAGCWP-----ILLQIPVFFAIYKVISI 449 L+EK + + + + ++++ ++ + P G ++ Q + F ++ + Sbjct: 292 QPLQEKLEAAIARGDDQQANIVRMQQSQVLKPYVGSMASMGGFMVAQAWIGFCAFRCLRA 351 Query: 450 SLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 ++ + + W DL DP I P S M+ Sbjct: 352 MGQLPVPGMNQDGFLWFADLTMRDPYF-------------------ILPATTSAIMYFVF 392 Query: 506 K------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 K ++ P + I++ + V + PAGL IY+ S + V ++ Sbjct: 393 KKGGETGITQSPNGAVTSKIMSGLAVFVGLITAFQPAGLQIYFLVSGIFGAVTGWLL 449 >gi|220910606|ref|YP_002485917.1| inner membrane protein translocase component YidC [Cyanothece sp. PCC 7425] gi|219867217|gb|ACL47556.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 7425] Length = 396 Score = 67.3 bits (162), Expect = 6e-09, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 62/176 (35%), Gaps = 17/176 (9%) Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP 470 + ++L + ++ L L A K ++ H A D Sbjct: 211 RGQERVKLDEKGHLVALQPGDVTLQGTVPGIASDKGFLFIDKLGHVGAIDNDLFTTAPDG 270 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS---PPPADKGQAMILNWMPVVF 527 + F FG + V I + +S++I +S + Q + P++F Sbjct: 271 SKQFN-FGAIHLD------VLIMILGFGVSLYINQILSGQGSTSNNPQQNTVNQMTPIIF 323 Query: 528 VFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 FP AG+++Y +N+ +Q +I+ + L + +R + ++ Sbjct: 324 SGMFLFFPLPAGVLLYMLIANIFQTLQTFLIL-----KEPLPENIRKLAEEETKAE 374 Score = 51.9 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 6/121 (4%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++L +PL+ + MK +Q Sbjct: 1 MDFGIGFLSDNVMLPILDFFYGIVPSYGLAIVALTLVIRLALYPLSAGSIRNMRQMKIVQ 60 Query: 394 PKID----ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P + E++EK+K P Q+AM ++YK NPLAGC+P+LLQ+P+ FA++ + Sbjct: 61 PMMQKKVKEIQEKYKN-DPTGQQQAMSEVYKEFG-NPLAGCFPLLLQMPILFALFATLRG 118 Query: 450 S 450 S Sbjct: 119 S 119 >gi|116073512|ref|ZP_01470774.1| putative inner membrane protein translocase component YidC [Synechococcus sp. RS9916] gi|116068817|gb|EAU74569.1| putative inner membrane protein translocase component YidC [Synechococcus sp. RS9916] Length = 380 Score = 67.3 bits (162), Expect = 6e-09, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 7/138 (5%) Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMK 506 ++ A G I LAA G + FY G ++ + I +S+F Sbjct: 223 TAIAPGDATVEGKIPGLAARSGFLFIKALGQVGFYSDGAINWDIAILVGAFGVSLFASQL 282 Query: 507 MSPP--PADKGQAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGA 562 +S PA+ QA PV+ FP AG+++Y +N+ Q ++ + Sbjct: 283 LSGMGMPANPQQATANKITPVMITGMFLFFPLPAGVLLYMVIANIFQAGQTFLLTR-EAL 341 Query: 563 EIGLIDRLRSTFSKNYNS 580 L L + + Sbjct: 342 PDNLQAILNDQMKQQATA 359 Score = 54.2 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + + + + Sbjct: 8 NLLIPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67 Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 K + PQ Q+ + +L K +PLAGC P+L+Q+P+ FA++ + S Sbjct: 68 KSRFANNPQKQQEELQKLMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116 >gi|124487900|gb|ABN12033.1| mitochondrial inner membrane protein OXA1L precursor [Maconellicoccus hirsutus] Length = 188 Score = 67.3 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 51/118 (43%), Gaps = 11/118 (9%) Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 F A+ K+ + +E + W DL D + L + + G + VG+ + Sbjct: 3 FFMALKKMAYVPVESMTTGGFLWCTDLTVPDQFYLLPLITSITLW--GIIEVGVDTGKAT 60 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ ++ + ++P+V + +FPAG+ YW ++N +S+ Q A + Sbjct: 61 VAGQFSRFVNLG---------MKFIPLVAFPFMMNFPAGVCCYWMFTNFVSLGQVAFL 109 >gi|302560470|ref|ZP_07312812.1| preprotein translocase YidC subunit [Streptomyces griseoflavus Tu4000] gi|302478088|gb|EFL41181.1| preprotein translocase YidC subunit [Streptomyces griseoflavus Tu4000] Length = 238 Score = 67.3 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 20/220 (9%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 V AI+L T FV+LL PL++ +QP+I ELR + P+ L++A++ Sbjct: 21 VSAAAAAIVLFTAFVRLLVHPLSRAAARGQKARTALQPRIAELRRRH-GRDPEKLRRAVL 79 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL-AAADPTNIFT 475 +L+ ++PL+GC P LLQ+P FF + + S E+ L AA Sbjct: 80 ELHTREKVSPLSGCLPSLLQVPAFF-LMYHLFSSEEIGGRANALLDHQLFAAPLGGRWAD 138 Query: 476 LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--------------MILN 521 G + + ++++ + ++S A + Sbjct: 139 ALGDGGVFGGAGVVYVGLFAVVAVVAWFGYRLSRRMMAAQSATAGVGGGEQVPGLGAVTK 198 Query: 522 WMPVVFVFALSS---FPAGLIIYWSWSNVISIVQQAVIMK 558 MP + F L S P +Y S +V++AV+ + Sbjct: 199 VMPFMSFFTLVSVAVMPLAAALYVVTSTTWGLVERAVLYR 238 >gi|322712796|gb|EFZ04369.1| OXA1-like protein [Metarhizium anisopliae ARSEF 23] Length = 418 Score = 67.3 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 69/226 (30%), Gaps = 36/226 (15%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNL-VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 + + M + + + +G +IM T V ++ + F + A M+ Sbjct: 91 KALGLDFGTGPTSVMQWALEHVHIYSGLGWGASIMATAVLLRCIMFYPQVRSLKFNAVMQ 150 Query: 391 NIQPKIDELREK--------FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 N++ + + + + + ++ K G QIP F Sbjct: 151 NLRKDPRSQEAMKLVQQGFANQDNEMRQKGQYLNKMLKEQYGVNNWGMLWSFGQIPFTFG 210 Query: 443 IYK----VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 +++ + ++ + + W DL A DP I G + VG I Sbjct: 211 LFRIVSGMANVPVPAMETAGYLWFTDLTATDPYFILPAAG-------TALMVGALAI--- 260 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALS----SFPAGLII 540 + + Q +L M VF AG+ + Sbjct: 261 ---------NAKHTPESQKKMLKTMTYVFGVVGFIGTTFLSAGVNL 297 >gi|323356507|ref|YP_004222903.1| preprotein translocase subunit YidC [Microbacterium testaceum StLB037] gi|323272878|dbj|BAJ73023.1| preprotein translocase subunit YidC [Microbacterium testaceum StLB037] Length = 270 Score = 66.9 bits (161), Expect = 8e-09, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 83/254 (32%), Gaps = 7/254 (2%) Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI 364 + + + F + + + L L G A+ Sbjct: 6 EGRWRSDPSITDPLIAATNGTLMDLFTLPPLAFLLDLTTRALLALTDTLTPLTGGLAAAL 65 Query: 365 MLTTVFV--KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 + V + +L P+ Q + + P++ L+E+++++P LQ+ +QLY+ Sbjct: 66 AVVAVTLVVRLALIPVGVSQARAEQTRARLAPRLRVLQERWRKNPE-RLQRETMQLYRDE 124 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 N +P AGC P+L Q PV +Y V HA ++ Sbjct: 125 NTSPAAGCLPLLAQAPVVGLLYAVFLHPTVGGHANTLLTHDLFGVPLGRSLVGALTSGTM 184 Query: 483 YLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF----ALSSFPAGL 538 ++++ + ++ P D + M V F P Sbjct: 185 DATTLAVFASLVVVIAGVAELTRRLLRPATDPSAPTWMTGMVGVLQFTTAGVALFVPLAA 244 Query: 539 IIYWSWSNVISIVQ 552 +Y + + + ++ Q Sbjct: 245 ALYLTVTTMWTLGQ 258 >gi|18376225|emb|CAD21340.1| related to cytochrome oxidase processing protein OXA1 [Neurospora crassa] Length = 452 Score = 66.9 bits (161), Expect = 8e-09, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 85/298 (28%), Gaps = 52/298 (17%) Query: 274 QFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 Q +Y S G A +A P S + + + + F Sbjct: 66 QVRYASTGPDAAVAADAATAAAAAPSSSPVDAVAATPVELTGSDLLNLPEQIG---FLKT 122 Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL-----LFFPLAKKQYVSTAN 388 + + + + M L + Y G A + + +++ Sbjct: 123 LGLDYGWGVTSMMQWLTEHVYVYSGLPWWATLAAVAAIVRVAIFKPSLGASQESQKMQDL 182 Query: 389 MKNIQPKIDELREKFKQSPPQV------LQKAMIQLYKTHNINPLAGCWPILLQIPVFFA 442 KN + + K ++ M + K IN + +Q+P+ F Sbjct: 183 NKNPKYAAIMAKVKEASFDTTKQNDLVKYRQEMALMTKNAGINYFK-VFIPFIQVPIGFG 241 Query: 443 IYKVISIS----LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 ++++I +E W DL ADP PI + Sbjct: 242 MFRLIRGMAALPVESLETGGTLWFPDLTVADPYF-------------------ALPIASA 282 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFV----FALSSFPAGLIIYWSWSNVISIVQ 552 M+ A ++ M +V V FA + PA L Y+ S + Q Sbjct: 283 CLFVASMR----------ARMMKSMGLVLVPVSIFATAWLPAALQWYFLVSAIGQYFQ 330 >gi|241997838|ref|XP_002433562.1| cytochrome oxidase biogenesis protein, putative [Ixodes scapularis] gi|215495321|gb|EEC04962.1| cytochrome oxidase biogenesis protein, putative [Ixodes scapularis] Length = 334 Score = 66.9 bits (161), Expect = 8e-09, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 93/314 (29%), Gaps = 30/314 (9%) Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + + TT F+ + F + + Sbjct: 24 VRQEPVLLRTQTQKTTKYRHFSFESWGMALSRSAPVAYAQEFLETVHMNSGLSWCTTIVT 83 Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 +V + + ++ L EK + Sbjct: 84 TSLALRIVVTLPLAVYQSHIIARLANLDKEIAQIAHELRGETARAVRMYNLDEKQAKYLY 143 Query: 409 QVL-QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA 467 + +K + L N +P I Q+P++ ++ S+ +R+ + +D+AA Sbjct: 144 RRSLKKQINNLIVRDNCHPFKSSLVIWFQLPLWISL------SVALRNMAYMMPYQDMAA 197 Query: 468 ADPTNIFTLFGILPF-YLPGFMHVGIWPIIMSLSMFIQMK---MSPPPADKGQAMILNW- 522 ++ G L F L + + P+++ ++ + ++ + +L + Sbjct: 198 QALFLELSVGGALWFPNLTVPDPLFVMPVLLGITNLLNIEFHALQHTKQLTKVRKVLTYT 257 Query: 523 ---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI---------------MKMHGAEI 564 M V+ + S P + +YW S+ ++ Q ++ + Sbjct: 258 LRGMSVLMIPIASIMPTDVTLYWLCSSGFALGQNLLMINPKFRRACRIPRTANESQTPFR 317 Query: 565 GLIDRLRSTFSKNY 578 L DRL+ F N Sbjct: 318 DLSDRLKKRFEFNK 331 >gi|260436088|ref|ZP_05790058.1| inner membrane protein OxaA [Synechococcus sp. WH 8109] gi|260413962|gb|EEX07258.1| inner membrane protein OxaA [Synechococcus sp. WH 8109] Length = 395 Score = 66.9 bits (161), Expect = 8e-09, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKGQA 517 I LAA G + FY G ++ + I +++FI +S PA+ QA Sbjct: 255 IPGLAARSGFLFIKALGQVGFYADGAINWDIAILVAGFGITLFISQLLSGMGMPANPQQA 314 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 PV+ FP AG+++Y +N+ +Q ++ K Sbjct: 315 TANKITPVMITGMFLFFPLPAGVLLYMLIANIFQGLQTFILTK 357 Score = 51.1 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 62/110 (56%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ T+ +++ +PL+ S M+ QP I + + + Sbjct: 27 NLLIPILDFFYGLVPSYGLAIVALTLVIRIALYPLSAGSIRSARRMRIAQPVIQKRQAEI 86 Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 K + PQ Q+ + + K +PLAGC P+L+Q+P+ FA++ + S Sbjct: 87 KSRYANNPQKQQEELGNVMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 135 >gi|281201305|gb|EFA75517.1| putative oxidase assembly protein [Polysphondylium pallidum PN500] Length = 398 Score = 66.9 bits (161), Expect = 8e-09, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 97/285 (34%), Gaps = 30/285 (10%) Query: 280 DGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF 339 + + + + S+ TT + + + + + ML G Sbjct: 86 NSPYNGEIPILNSHMLSSQNSSVATTTTTGSNEVKLSELGAAQAEAITQDPSMLEITGLP 145 Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 FI + L ++ + + T+ ++ P A KQ ++ + I+P++D+ Sbjct: 146 TFIEVLLHHL---HSATGWSWMVIVPAFTLLIRSALLPFAVKQRINVTRLMEIKPQLDKF 202 Query: 400 REKFKQSPPQVLQK-----AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---SL 451 +EK +++ A+ +L K +P L +P F + + + Sbjct: 203 KEKSQENRATGASNYDNSVAITKLLKDKKCHPALSYILPLANLPFFISAIIAMREMAATF 262 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM--SLSMFIQMKMSP 509 W DL+A DP I + + L + +G P + ++S Sbjct: 263 PSMKTAGMLWFTDLSAMDPYFILPIISSASYLLVNELTLGNAPNLFLKAISWVA------ 316 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 M ++ + + P+ + YW S++ ++ Q Sbjct: 317 -----------RIMALLIIPFSYTIPSIVYFYWIPSSIFTLAQIY 350 >gi|225619519|ref|YP_002720776.1| putative inner membrane protein [Brachyspira hyodysenteriae WA1] gi|225214338|gb|ACN83072.1| putative inner membrane protein [Brachyspira hyodysenteriae WA1] Length = 1001 Score = 66.9 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 93/236 (39%), Gaps = 26/236 (11%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVS 385 F++ + + + + ++G+++ L ++ + L PL Q Sbjct: 4 FDIFYNIIIYPIEFIIEILFYLFSVEFKSSYGVSLFLLSLCINFLSLPLYNIAESWQAKE 63 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A ++P ID ++ +K +L + ++ I G +L+QIP F A Y Sbjct: 64 RAIQDKMKPMIDNIKAVYKGDQRYLLIRTCQRINGYKTIYAFRGTLGLLIQIPFFMAAYN 123 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-- 503 + + + +IKDL+ D G + + + P +M+L + Sbjct: 124 FVHSLSGLSGQS-FLFIKDLSKPDALIH-----------IGNISINLLPFLMTLFSLLAG 171 Query: 504 ---QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 K+ + L + ++F+ L + P+GL+ YW+ + + S ++ +I Sbjct: 172 FVYSRKLKFKESLP-----LYIVSLIFLLLLYNSPSGLLFYWTINCLFSFIKNIII 222 >gi|323463903|gb|ADX76056.1| membrane protein OxaA [Staphylococcus pseudintermedius ED99] Length = 288 Score = 66.6 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 103/263 (39%), Gaps = 41/263 (15%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-- 395 + F+ ++ +L N+G+AI++ + V+++ P Y + M+ Sbjct: 33 FNTFVQPMDRLIHWLGDHLNNNYGLAIIIIVLVVRIVLLPFMLSNYKNMHMMREKMKIAK 92 Query: 396 ------IDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKV 446 ++++ Q + M+Q+YK +N+NP+A GC P++LQ+P+ ++ V Sbjct: 93 PEITEAQEKVKRARTQEDKMAANQEMMQVYKKYNMNPMASMLGCLPLILQMPIIMGLFFV 152 Query: 447 ISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + + W L D II + FIQ Sbjct: 153 LKYPSGGGITKYSDFLWFH-LDKPDIW---------------------ITIIAGVLYFIQ 190 Query: 505 MKMSPPPADKGQAMILNWMPVVF----VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S + Q + M ++ V+ S A L +YWS S +VQ + ++ Sbjct: 191 AYVSSFNMPQEQRQMGYMMMIISPIMIVWISFSSAAALGLYWSVSAAFLVVQTYIANVVY 250 Query: 561 G--AEIGLIDRLRSTFSKNYNSQ 581 G A+ + ++ ++ ++ Sbjct: 251 GKKAKEEVAPLIKKFEAEKNGNK 273 >gi|28395049|ref|NP_776188.1| mitochondrial inner membrane protein COX18 precursor [Homo sapiens] gi|332819554|ref|XP_517237.2| PREDICTED: mitochondrial inner membrane protein COX18 isoform 2 [Pan troglodytes] gi|38372495|sp|Q8N8Q8|COX18_HUMAN RecName: Full=Mitochondrial inner membrane protein COX18; Short=COX18Hs; AltName: Full=Cytochrome c oxidase assembly protein 18; Flags: Precursor gi|21755775|dbj|BAC04758.1| unnamed protein product [Homo sapiens] gi|63253776|gb|AAY35060.1| mitochondrial COX18 [Homo sapiens] gi|63253778|gb|AAY35061.1| mitochondrial COX18 [Homo sapiens] gi|75516702|gb|AAI01685.1| COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) [Homo sapiens] gi|119626058|gb|EAX05653.1| mitochondrial COX18 [Homo sapiens] Length = 333 Score = 66.6 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 60/163 (36%), Gaps = 31/163 (19%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFW-------- 459 + +++ + +LY N +P + +Q+P++ + + S H+ + Sbjct: 150 KNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLSTGAAHSEGFSVQEQLAT 209 Query: 460 ---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 W DL A D T I + + + + K+ Q Sbjct: 210 GGILWFPDLTAPDSTWIL---------PISVGVINLLIVEICAL----QKIGMSR---FQ 253 Query: 517 AMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 I + M V+ + ++ P+ +++YW S+ + + Q ++ Sbjct: 254 TYITYFVRAMSVLMIPIAATVPSSIVLYWLCSSFVGLSQNLLL 296 >gi|296414378|ref|XP_002836878.1| hypothetical protein [Tuber melanosporum Mel28] gi|295632720|emb|CAZ81069.1| unnamed protein product [Tuber melanosporum] Length = 304 Score = 66.6 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 86/299 (28%), Gaps = 54/299 (18%) Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 L A + + + +L + + Sbjct: 5 YPLLAKPLYRVLLTKPLHHRQFSSTTPNHLIPAILSTTHDLLTTLHTSTHL-PYHTLIPL 63 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR--------------EKFKQSPPQVL 411 + PL + +QP + + + ++ + + Sbjct: 64 SAIFLRLTITTPLTIYSRRRALRTQRLQPILSAYQHPIARGAKSATTTPQAWELKTRKEM 123 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS--LE-----MRHAPFWG---- 460 ++ +L+K ++QIPV+ A + +E +R + G Sbjct: 124 REKRRELWKRWGCQAWKMLLAPVVQIPVWVAASMTLRGMTGIEGLPTWLRGSGEIGGEAW 183 Query: 461 -----------WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 W DL ADP LP + I +Q K+ P Sbjct: 184 VEEALATEGALWFGDLLIADPY------LALPMGFSFLLFANIE---------LQSKLHP 228 Query: 510 PPADKGQ--AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 P K + +L + + ++ PA L +YWS S + S+VQ ++ K+ L Sbjct: 229 PSTRKQRVFTNVLRILSLAAFPLTANAPAALTLYWSTSAMFSLVQNIILAKVMPRGDEL 287 >gi|328725129|ref|XP_003248356.1| PREDICTED: mitochondrial inner membrane protein COX18-like [Acyrthosiphon pisum] Length = 349 Score = 66.6 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 34/258 (13%), Positives = 84/258 (32%), Gaps = 32/258 (12%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF-----PLAKKQYVST 386 + +A ++S+ + IML+ V ++L+ Sbjct: 62 WFMALSNSTPVAYAQQFVISFHEFTGTPWWATIMLSAVALRLVITLPLTVYQHYNNSKLE 121 Query: 387 ANMKNIQPKIDELRE---------KFKQSPPQVLQKAMIQ-----LYKTHNINPLAGCWP 432 QP + E+++ ++ ++ + + ++ L N +P Sbjct: 122 NLSIEFQPTVVEIQKEVVKAVKLNRWPENKAKRVYNKAVKKYWDELIVKENCHPAKSTIV 181 Query: 433 ILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 + +Q+P++ + S+ R+ D A + + L Sbjct: 182 VWVQLPLWICM------SIATRNLTLMLPPSDDAVIRFYELTEGGILWFTNLTAIDPTLS 235 Query: 493 WPIIMSLSMFI-----QMKMS--PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWS 545 P+IM LS + + P K I + ++ + P+G+ +YW+ S Sbjct: 236 LPLIMCLSNLLIIEIQTQSRNKEPTRNQKIITNIFRGLTIIMMPLSCFLPSGVSLYWTAS 295 Query: 546 NVISIVQQAVIMKMHGAE 563 ++ + Q ++ + Sbjct: 296 SIYGLSQNLFLLSPQVRK 313 >gi|305680478|ref|ZP_07403286.1| putative inner membrane protein translocase component YidC [Corynebacterium matruchotii ATCC 14266] gi|305660009|gb|EFM49508.1| putative inner membrane protein translocase component YidC [Corynebacterium matruchotii ATCC 14266] Length = 386 Score = 66.6 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 98/270 (36%), Gaps = 50/270 (18%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN---------FGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 P+ +M ++ L+ + + ++I + V+ L P S Sbjct: 1 MLGIFMYPVSGIMKLWHILLHSVLGINDSLAWVLSIFGLIIVVRGLIAPAQWYILHSGRL 60 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAM----IQLYKTHNINPLAGCWPILLQIPVFFAIY 444 ++P+I L ++++ ++ K++ AGC P L+QIPVF +Y Sbjct: 61 TVMMRPEITALHKEYENETSYEKISERDQREREIRKSYGYRVSAGCIPPLIQIPVFLGLY 120 Query: 445 KVISISLEMRHAPFWG---WIKDLAAADPTNIFTL-FGILP------FYLPGFMHVG--- 491 +V+ ++ I L++AD ++ FG +P F +G Sbjct: 121 QVLLRMARPKNGLDSQVHDPIGMLSSADVSSFLHARFGSIPVSAYVSMTPQQFARLGTNY 180 Query: 492 ------IWPIIMS--LSMFIQMKMS-----PPPADKGQAMI--LNW---------MPVVF 527 + P++++ L FI M ++ + Q I + +V Sbjct: 181 EEVMRFVAPLLLATALITFINMSITVIRNYLTIDHQSQTAIVVMRMVAVATVCTPFLLVS 240 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P ++ YW +N+ ++VQ I Sbjct: 241 GGLTGPVPTAIVAYWVANNLWTLVQNVTIY 270 >gi|87303020|ref|ZP_01085824.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 5701] gi|87282516|gb|EAQ74475.1| putative inner membrane protein translocase component YidC [Synechococcus sp. WH 5701] Length = 378 Score = 66.6 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 6/100 (6%) Query: 465 LAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKGQAMIL 520 LAA G + FY G ++ + I S+FI +S P + Q+ Sbjct: 239 LAARSGFLFIKALGQVGFYTDGAVNWDIAILVGAFGASLFISQILSGAGMPPNPQQSTAN 298 Query: 521 NWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 PV+ FP AG+++Y +N+ +Q ++ + Sbjct: 299 KITPVMITGMFLFFPLPAGVLLYMVVANIFQALQTFLLSR 338 Score = 55.4 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + + + + Sbjct: 8 NLLLPILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67 Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 K PQ Q+ + +L K +PLAGC P+L+Q+P+ FA++ + S Sbjct: 68 KSRYASNPQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116 >gi|167957213|ref|ZP_02544287.1| 60 kDa inner membrane insertion protein [candidate division TM7 single-cell isolate TM7c] Length = 307 Score = 66.6 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 53/236 (22%), Positives = 105/236 (44%), Gaps = 43/236 (18%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + FI +P+ L+ Y+L+ +FGI+I++ T+ V+LL +PL KKQ M+ +QP++ Sbjct: 4 FDEFIVRPILNLLMAIYSLIPDFGISIIVFTILVRLLLWPLIKKQLHQAKAMRKMQPELA 63 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR--- 454 +++ K PQ+ AM++LYK HNI+ +++Q+P+ A+Y+V+ I + R Sbjct: 64 KIK-KQYAKNPQMRNLAMMELYKKHNISAFGSIGVLIIQLPILIAMYRVVQIFVSSRADL 122 Query: 455 HAPFWGWIKDLAA-------ADPTNIFTLFGILPFYLPGFMHVGIWP---IIMSLSMFIQ 504 + ++K+L D N GI+ G+ ++ ++ ++Q Sbjct: 123 GKYVYDFVKNLPVANNLVNNPDQFNQ-NFLGIIDLTQHAVSKDGVIIGLLVLAGVAAYLQ 181 Query: 505 ----MKMSPPPADK------------------------GQAMILNWMPVVFVFALS 532 ++SP K ++ +MP++ Sbjct: 182 YLTSKQLSPQSDSKRKLRDILAEAGGGKEADQSEVNAIMTRKMMKFMPIMMFMVTI 237 >gi|300789488|ref|YP_003769779.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei U32] gi|299799002|gb|ADJ49377.1| preprotein translocase YidC subunit [Amycolatopsis mediterranei U32] Length = 214 Score = 66.2 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 11/209 (5%) Query: 350 MSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 + + + +AI++ T+ V+LL PLA+ + P+I LREK + Sbjct: 15 LIHVLTGPLSTALAIVVFTLGVRLLLHPLARSAARGERARTALLPEITALREKH-GRDRE 73 Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD 469 L M +L + + GC P+LLQ+P F +Y+ + + + P L A Sbjct: 74 RLAAEMTKLQQESGTSLFVGCLPMLLQLPFFMVMYR-LFTTATIGGEPNSL----LGA-- 126 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 + + I + ++ + ++ P AD +L +P V Sbjct: 127 --TLLGTPLGAHGLAGSPLVFVIAAGLAVVA-WFSVRRQPAAADVPGGKLLRLLPYGTVL 183 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 A P IY + S ++A++ + Sbjct: 184 ATLVVPQAAGIYLLTTTAWSAAERALLRR 212 >gi|255102348|ref|ZP_05331325.1| hypothetical protein CdifQCD-6_16136 [Clostridium difficile QCD-63q42] gi|255308247|ref|ZP_05352418.1| hypothetical protein CdifA_16766 [Clostridium difficile ATCC 43255] Length = 216 Score = 66.2 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 17/214 (7%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FI+ + L+S +N G+FGI+I+L T+ VKL+ PL+ KQ S + + K++ Sbjct: 1 MDFISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEH 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++EK+K ++ ++ IQ+ ++ + GC +L+Q+PV +A+Y V + Sbjct: 61 IKEKYKNDTKELEKQ--IQVSSVESMKSMLGCLIVLVQMPVVYALYHVCLDMTKEFTTII 118 Query: 459 WGWIKDLAAADPTNIFT-LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 WI +L D I ++ ++ ++ K++ Q Sbjct: 119 IPWIANLGTFDNLFILPCIYTLIMLASNLVNYIPYL------------KINSQVKFNKQM 166 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ + + P + +Y+ S + S++ Sbjct: 167 AVVT--TITSLILTVRTPVAIGLYFITSAIYSLI 198 >gi|148241736|ref|YP_001226893.1| putative inner membrane protein translocase component YidC [Synechococcus sp. RCC307] gi|147850046|emb|CAK27540.1| Preprotein translocase subunit YidC [Synechococcus sp. RCC307] Length = 378 Score = 66.2 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 14/134 (10%) Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS--LSMFIQMKM 507 ++E++ I LAA G + F G ++ I ++ LS+F+ + Sbjct: 231 TVELK-------IPGLAARSGFLFIKALGQVGFMADGVINWDIATLVAGFGLSLFLSQIL 283 Query: 508 SP--PPADKGQAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 S PA+ QA PV+ FP AG+++Y +N+ +Q ++++ Sbjct: 284 SGWGMPANPQQATANRITPVMITGMFLFFPLPAGVLLYMVVANIFQALQTFLLIR-EPLP 342 Query: 564 IGLIDRLRSTFSKN 577 L L + Sbjct: 343 DNLQTILEQQLANQ 356 Score = 54.2 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE-- 401 + ++ +FY LV ++G+AI+ TV ++L FPL+ + M+ QP + + + Sbjct: 8 NVLLPILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRNARRMRIAQPVMQQRQAEI 67 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + K + Q+ + +PLAGC P+L+Q+P+ FA++ + S Sbjct: 68 RSKFANNPSKQQEEMGKLMKEFGSPLAGCLPLLVQMPILFALFATLRGS 116 >gi|113953629|ref|YP_731297.1| inner membrane protein translocase component YidC [Synechococcus sp. CC9311] gi|113880980|gb|ABI45938.1| Inner membrane protein oxaA [Synechococcus sp. CC9311] Length = 382 Score = 66.2 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 6/105 (5%) Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKG 515 G I LAA G + FY G ++ + I LS+F+ +S PA+ Sbjct: 234 GKITGLAARSGFLFIKALGQVGFYTEGAINWDIAILIGAFGLSLFVSQLLSGMGMPANPQ 293 Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 Q+ PV+ FP AG+++Y +N+ Q ++ + Sbjct: 294 QSTANKITPVMITGMFLFFPLPAGVLLYMVIANIFQAFQTFLLTR 338 Score = 53.5 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + + + + Sbjct: 8 NLLIPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67 Query: 404 ---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + PQ Q + +L K +PLAGC P+L+Q+P+ FA++ + S Sbjct: 68 KARYANDPQKQQAELGKLMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116 >gi|254568278|ref|XP_002491249.1| Mitochondrial integral inner membrane protein required for membrane insertion of C-terminus of Cox2p [Pichia pastoris GS115] gi|238031046|emb|CAY68969.1| Mitochondrial integral inner membrane protein required for membrane insertion of C-terminus of Cox2p [Pichia pastoris GS115] gi|328352232|emb|CCA38631.1| Inner membrane protein oxaA [Pichia pastoris CBS 7435] Length = 324 Score = 65.8 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 69/224 (30%), Gaps = 34/224 (15%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL--REKFKQSPPQVLQKAMIQLYK 420 + ++L A + P EK + +K +L++ Sbjct: 88 LVTAMGPLLRLKLAQQASISQKLQRESIDFFPTEATKLNYEKIMILAAKESRKRQKKLFR 147 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISI-----SLEMRHAP--------FWGWIKDLAA 467 H + + Q+P++ + S E + P + W+ DL Sbjct: 148 DHGVQIWKNAILPVFQVPLWVTLSWTFRNLTGWHSFEQGNKPLDSSLIHEGFFWLHDLTV 207 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK------GQAMILN 521 DP I P + + + +QM+ S K I+N Sbjct: 208 PDPYMIL----------PVVLGSVALINLEWNNKTLQMRSSSAQGKKVSLRPTMMDAIMN 257 Query: 522 W--MPVVF-VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 + F + + P GL +YW SN+ S+ Q ++ K Sbjct: 258 LSRFSIAFLMVISTQAPVGLSLYWISSNLYSLSQNMILDKYLPI 301 >gi|225620984|ref|YP_002722242.1| inner membrane protein [Brachyspira hyodysenteriae WA1] gi|225215804|gb|ACN84538.1| inner membrane protein [Brachyspira hyodysenteriae WA1] Length = 900 Score = 65.8 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 84/222 (37%), Gaps = 16/222 (7%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F++ I F + + + + + L+ K Q Sbjct: 8 FDVFIFPIEFIIETLFFLFKNIFNLSYSTSIFLLSLSINFLSLPLYNIAEKWQEKERNIQ 67 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 ++P ID ++ +K +L + ++ I G +L+QIP F A Y I Sbjct: 68 NKMKPIIDNIKAVYKGDQRYLLIRTCHRINGYKIIYAFRGVLGLLIQIPFFIAAYNFIYS 127 Query: 450 SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP 509 ++ + IKD + D N+ +LPF + I+ I+ M K+S Sbjct: 128 LSDLSQGNLFF-IKDFSKPD--NLINGINLLPFTMT------IFSILAG--MVYSKKLSI 176 Query: 510 PPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + L ++F+ L + P+GL+ YW+ + + S++ Sbjct: 177 KESMP-----LYITSLIFLIILYNSPSGLLFYWNINCLFSLI 213 >gi|254976798|ref|ZP_05273270.1| hypothetical protein CdifQC_15858 [Clostridium difficile QCD-66c26] gi|255094184|ref|ZP_05323662.1| hypothetical protein CdifC_16201 [Clostridium difficile CIP 107932] gi|255315936|ref|ZP_05357519.1| hypothetical protein CdifQCD-7_16339 [Clostridium difficile QCD-76w55] gi|255518595|ref|ZP_05386271.1| hypothetical protein CdifQCD-_15858 [Clostridium difficile QCD-97b34] gi|255651715|ref|ZP_05398617.1| hypothetical protein CdifQCD_16123 [Clostridium difficile QCD-37x79] gi|260684747|ref|YP_003216032.1| hypothetical protein CD196_3018 [Clostridium difficile CD196] gi|260688405|ref|YP_003219539.1| hypothetical protein CDR20291_3064 [Clostridium difficile R20291] gi|306521514|ref|ZP_07407861.1| hypothetical protein CdifQ_18521 [Clostridium difficile QCD-32g58] gi|260210910|emb|CBA66127.1| putative membrane protein [Clostridium difficile CD196] gi|260214422|emb|CBE06852.1| putative membrane protein [Clostridium difficile R20291] Length = 216 Score = 65.8 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 17/214 (7%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FI+ + L+S +N G+FGI+I+L T+ VKL+ PL+ KQ S + + K++ Sbjct: 1 MDFISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEH 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++EK+K ++ ++ IQ+ ++ + GC +L+Q+PV +A+Y V + Sbjct: 61 IKEKYKNDTKELEKQ--IQVSSVESMKSMLGCLIVLVQMPVVYALYHVCLDMTKEFTTII 118 Query: 459 WGWIKDLAAADPTNIFT-LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 WI +L D I ++ ++ ++ K++ Q Sbjct: 119 IPWIANLGTFDNLFILPCIYTLIMLASNLVNYIPYL------------KINSQVKFNKQM 166 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ + + P + +Y+ S + S++ Sbjct: 167 AVVT--TITSLILTVRTPVAIGLYFITSAIYSLI 198 >gi|219517933|gb|AAI43643.1| COX18 protein [Homo sapiens] Length = 334 Score = 65.8 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 59/164 (35%), Gaps = 32/164 (19%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHA----------- 456 + +++ + +LY N +P + +Q+P++ + + S H+ Sbjct: 150 KNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLSTGAAHSEAGFSVQEQLA 209 Query: 457 -PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 W DL A D T I + + + + K+ Sbjct: 210 TGGILWFPDLTAPDSTWIL---------PISVGVINLLIVEICAL----QKIGMSR---F 253 Query: 516 QAMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q I + M V+ + ++ P+ +++YW S+ + + Q ++ Sbjct: 254 QTYITYFVRAMSVLMIPIAATVPSSIVLYWLCSSFVGLSQNLLL 297 >gi|328948334|ref|YP_004365671.1| 60 kDa inner membrane insertion protein [Treponema succinifaciens DSM 2489] gi|328448658|gb|AEB14374.1| 60 kDa inner membrane insertion protein [Treponema succinifaciens DSM 2489] Length = 905 Score = 65.8 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 24/242 (9%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 + Y + + + + ++ L+ N G +++ ++ V LL PL Sbjct: 1 MGVFFFTIVIYPLTQIIELAFTFSNKLLKNTGFSLVGVSLAVSLLTLPLYAVAEHWQEIE 60 Query: 390 KNIQPKIDELREKFKQ-SPPQVLQKAMIQLYKTHNINPLAGC---WPILLQIPVFFAIYK 445 +NIQ K+ ++ K+ + Y+ ++ +P+ + IL+QIP F A Y Sbjct: 61 RNIQAKMKPQVDRIKKVFKGDEQYMILSTYYRQNHYHPIMSLRSAFGILIQIPFFTAAYT 120 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM----SLSM 501 +S +++ + I DL D F V I PI+M +S Sbjct: 121 CLSHMPALQNHHLFF-IADLGKPDALFSIGSF-----------SVNILPILMTVINCISG 168 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 I K P DK Q +L +FV L + P+GL+IYW+ +N+ S+V+ + Sbjct: 169 AIYTKGLPLK-DKFQVYLLAL---LFVVLLYNSPSGLVIYWTMNNIFSLVKNIFYKLKNP 224 Query: 562 AE 563 + Sbjct: 225 IK 226 >gi|332233164|ref|XP_003265773.1| PREDICTED: mitochondrial inner membrane protein COX18 [Nomascus leucogenys] Length = 333 Score = 65.8 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 59/163 (36%), Gaps = 31/163 (19%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFW-------- 459 + +++ + +LY N +P + +Q+P++ + + S H+ + Sbjct: 150 KNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLSTGAAHSEGFSVQEQLAT 209 Query: 460 ---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 W DL D T I + + + + K+ Q Sbjct: 210 GGILWFPDLTVPDSTWIL---------PISVGVINLLIVEICAL----QKIGMSR---FQ 253 Query: 517 AMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 I + M V+ + ++ P+ +++YW S+ + + Q ++ Sbjct: 254 TYITYFVRAMSVLMIPIAATVPSSIVLYWLCSSFVGLSQNLLL 296 >gi|227536314|ref|ZP_03966363.1| possible inner membrane protein translocase component YidC [Sphingobacterium spiritivorum ATCC 33300] gi|227243829|gb|EEI93844.1| possible inner membrane protein translocase component YidC [Sphingobacterium spiritivorum ATCC 33300] Length = 226 Score = 65.8 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 56/198 (28%), Gaps = 28/198 (14%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNER-------------------KNIQ 41 M+ N + + L I+ + + P E+ E+ Sbjct: 1 MD--RNTLIGLILIFAILGG-SFYLMKPSESEIKQEQRLQDSLKRVKEGLPPVADTTKTP 57 Query: 42 TVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDV 101 N A + A + L+N +I I KG + + L+ Sbjct: 58 AKTAVNTNQVDSAELKKPFGAAKYGEEKIITLQNEKIIAKITSKGGRVKSVELKN--EKN 115 Query: 102 SSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFK 161 SP++ +N F + NN+ ++ ++ G + +K Sbjct: 116 FDGSPLILFDGNNNRFGLMFNAAGQNISTNNLNFQTTDADVSISKG----DSKTVKFRLS 171 Query: 162 NANNILFERTISLDEHYL 179 + E T +L Sbjct: 172 YNDAQYIEYTYTLKGDDY 189 >gi|221195498|ref|ZP_03568553.1| 60Kd inner membrane protein [Atopobium rimae ATCC 49626] gi|221184685|gb|EEE17077.1| 60Kd inner membrane protein [Atopobium rimae ATCC 49626] Length = 646 Score = 65.8 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 92/225 (40%), Gaps = 26/225 (11%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 +AK +++ Y+L G++ AI L T+ K++ PLA ++ M I P++ Sbjct: 1 MLEQLAKLFSLIVQPAYDLTGSWWAAIFLFTLATKIILMPLALWTQQNSIVMVKIMPEMF 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 L+ ++ + +++ +L K +PL P+ +Q+ + F + VI Sbjct: 61 RLKTRYFG-DRETIEERQNELNKKAGYHPLLSLIPLAIQVIILFGLVDVIHG-------- 111 Query: 458 FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM----FIQMKMSPPP-- 511 I D A + G+ P G I P+ +LS K++P Sbjct: 112 ----ITDSGAPGTEFL----GMTPIIDGGI--TWIMPLAAALSSVALGLASNKINPLQRE 161 Query: 512 ADKGQAMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + + N + + + + G+ YW SN++SI+ Q V Sbjct: 162 QSRAEKNTTNGLSIAMSLVLAIYVVCGMAFYWVCSNLLSILVQVV 206 >gi|195995947|ref|XP_002107842.1| hypothetical protein TRIADDRAFT_51760 [Trichoplax adhaerens] gi|190588618|gb|EDV28640.1| hypothetical protein TRIADDRAFT_51760 [Trichoplax adhaerens] Length = 325 Score = 65.8 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 77/223 (34%), Gaps = 39/223 (17%) Query: 360 FGIAIMLTTVFVKLLFF-PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA---- 414 + + I +TT+ ++ PL Q +A + +QP + E+ E K + ++ Sbjct: 72 WWMTIAVTTITLRTCITLPLTIYQQKKSAKLVLLQPVVKEISEAVKYNVATKCRREDLPV 131 Query: 415 --------------MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 + LYK P Q+P++ +I + + P Sbjct: 132 EVAEERYKTLFSGMVRDLYKKEGCQPFKLFLLPWTQMPLWISISLGLRDLSIYKQDPAMA 191 Query: 461 -----WIKDLAAADPTNIFTL-FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 W +L DP I + FG+ G + +P Sbjct: 192 TEGLAWFSNLLLPDPAWILPICFGLCNLLNIEINAAG--------------RQAPGRIQA 237 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + +V V + P+ + YW+ S+ S+VQ +++M Sbjct: 238 IMKKVFVTLSIVMVPVATQIPSCMSFYWTLSSFYSLVQNSILM 280 >gi|157120946|ref|XP_001653718.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes aegypti] gi|157120948|ref|XP_001653719.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes aegypti] gi|157120950|ref|XP_001653720.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes aegypti] gi|108874748|gb|EAT38973.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes aegypti] gi|108874749|gb|EAT38974.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes aegypti] gi|108874750|gb|EAT38975.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Aedes aegypti] Length = 338 Score = 65.8 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 69/239 (28%), Gaps = 32/239 (13%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 G ++ + + ++ + + K+ + + K Sbjct: 71 SGLPWWASIILSTVLVRTVVTMPLAIYQNKIVARLEKISLEMP--EIVKQLKMETAVAMK 128 Query: 396 IDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 EK + K L N +P + QIP++ + I + M Sbjct: 129 KFHWSEKEARIMYNHSLKKQWNNLVVRENCHPAKTMILLWGQIPLWVMMSVSIRNMVHM- 187 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVG---------IWPIIMSL---SMF 502 DP++I L GF + I P+ M L ++ Sbjct: 188 ------------LPDPSSIEAQITFTELTLGGFGWIPNLTEVDQSLILPVAMGLINLTII 235 Query: 503 IQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + I M V+ + ++ P+ L +YW S+ + Q ++M Sbjct: 236 EIQNLVRTREPSRLQKIFTNMFRGLSVLMIPVAATVPSALCLYWVTSSACGLGQNLLLM 294 >gi|312073696|ref|XP_003139636.1| hypothetical protein LOAG_04051 [Loa loa] gi|307765201|gb|EFO24435.1| hypothetical protein LOAG_04051 [Loa loa] Length = 402 Score = 65.4 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 84/225 (37%), Gaps = 27/225 (12%) Query: 339 FYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 ++ A + + Y + + + + ++ T+ ++LL + + ++ + +ID Sbjct: 154 WWSPASWFRLALEYMHFNIDLPWWLTVICATISLRLLMIFVPIASHRLMGRVQLHKKEID 213 Query: 398 ELREKFKQSPPQVLQKAMIQLYKT-------HNINPLAGCWPILLQIPVF----FAIYKV 446 E +EK + + ++ K +I + L +F A+ K+ Sbjct: 214 EFKEKMESAQRSGNFLQTMEAQKELKDFLKTKDIKLYRQFMFMSLNGAIFMTQFIAVKKL 273 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 +S W KDL DP + L + + + Sbjct: 274 ADVSFPGMSTGGLYWFKDLTMPDPYYLLPLVSAITVAAVFKIGAE-----TGGT---NQS 325 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 +SP + Q M+ P++ VFA S+ + +YW SN+IS++ Sbjct: 326 ISP----QIQKMLTRIGPIM-VFACST--KAIALYWCTSNMISVI 363 >gi|224049074|ref|XP_002192470.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 340 Score = 65.4 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 67/181 (37%), Gaps = 27/181 (14%) Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 + ++ + + + +++ + +LY N +P + +Q+P++ Sbjct: 129 AQRLRYEVSARGKQLGWSEKVARLHFARNMRRIVTELYIRDNCHPFKATLLLWVQVPMWV 188 Query: 442 AIYKVISI-SLEMRHA--------PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 + + S+ R + W DL A D T I V + Sbjct: 189 CVSLALRNCSIGARGSAVQEQFSSGGALWFTDLTAPDSTWIL---------PVSLGLVNL 239 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVIS 549 + + S Q KM P + Q ++ N+ VV + ++ P+ + +YW S+++ Sbjct: 240 LVVEIFAS---QTKM---PVSRIQKLLTNFFRTVSVVMIPIAATVPSSMALYWLSSSLVG 293 Query: 550 I 550 + Sbjct: 294 L 294 >gi|126700823|ref|YP_001089720.1| hypothetical protein CD3204 [Clostridium difficile 630] gi|115252260|emb|CAJ70101.1| putative membrane protein [Clostridium difficile] Length = 216 Score = 65.4 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 17/214 (7%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 FI+ + L+S +N G+FGI+I+L T+ VKL+ PL+ KQ S + + K++ Sbjct: 1 MDFISSILQGLLSILFNFTGDFGISIVLITLIVKLVLMPLSLKQRFSVKKQQELAEKMEY 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++EK+K ++ ++ IQ+ ++ + GC +L+Q+PV +A+Y V + Sbjct: 61 IKEKYKNDTKELEKQ--IQVSSVESMKSMLGCLIVLVQMPVVYALYHVCLDMTKEFTTII 118 Query: 459 WGWIKDLAAADPTNIFT-LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 WI +L D I ++ ++ ++ K++ Q Sbjct: 119 IPWIANLGTFDNLFILPCIYTLIMLASNLVNYIPYL------------KINSQVKFNKQM 166 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ + + P + +Y+ S + S++ Sbjct: 167 AVVT--TITSLILTVRTPVAIGLYFITSAIYSLI 198 >gi|268637951|ref|XP_640859.2| hypothetical protein DDB_G0281171 [Dictyostelium discoideum AX4] gi|256012950|gb|EAL66882.2| hypothetical protein DDB_G0281171 [Dictyostelium discoideum AX4] Length = 418 Score = 65.4 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 82/226 (36%), Gaps = 31/226 (13%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 F + L + + T + +++L PLA + A M+ ++ +++ Sbjct: 140 QFNFDLIAKLNELHVQYGLPWVSIFVGTAIAIRVLTLPLAIRNQRDAAKMRLVKQDMEKH 199 Query: 400 REKFKQSPPQVLQKA--MIQLYKTHNINPLAGCWPILLQIPVF---FAIYKVISISLEMR 454 + ++ A + + H+ +P+ +LQ+P F + +S + Sbjct: 200 SYLNDGTQEGRIKIAELQKKSFAKHDTSPMKTLGLNMLQMPFIIYPFIFLRQLSGDTNLL 259 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-AD 513 W K+L+ ADP I P++ S+ + ++ S Sbjct: 260 VDAGALWFKNLSMADPYY-------------------ILPLVSSIFQYGSVRFSMTDDTS 300 Query: 514 KGQAMILN---WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 I+ ++P+VF F A L IYW+ +++I + Sbjct: 301 PMMKTIMTSFCFLPLVFTI---HFAASLNIYWAVNSMIFAFTNWFL 343 >gi|326918900|ref|XP_003205723.1| PREDICTED: mitochondrial inner membrane protein COX18-like, partial [Meleagris gallopavo] Length = 229 Score = 65.4 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 63/176 (35%), Gaps = 23/176 (13%) Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMI-QLYKTHNINPLAGCWPILLQIPVFFAI 443 +++ + EK + + + +I +LY N +P + +QIP++ + Sbjct: 25 QLRYEVSVRGRQLGWSEKVARFHFKKNLRRIITELYIRDNCHPFKATLLVWVQIPMWVCV 84 Query: 444 YKVISI---------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 + E W DL A D T I + +G+ Sbjct: 85 SLALRNCSVGALDSEVQEQFSTGGTLWFTDLTAPDSTWIMP------------VSLGLLN 132 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 ++ + +F K+ K L + VV V ++ P+ + +YW S+ + + Sbjct: 133 LL-IVEIFASQKLEASRFQKLATNFLRVLSVVMVPVAATVPSSMALYWLSSSFMGL 187 >gi|159903814|ref|YP_001551158.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9211] gi|159888990|gb|ABX09204.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT 9211] Length = 383 Score = 65.4 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 7/126 (5%) Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSP--PPADKG 515 G I LAA G + FY+ G ++ I ++ +++ I +S P + Sbjct: 234 GKIPGLAAKSGFLFIKALGNVGFYVDGSINWDIAILVGGFGVTLVISQVLSGRGMPPNPQ 293 Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 QA PV+ FP AG+++Y +N+ +Q ++ L L Sbjct: 294 QATAQKITPVMITGMFLFFPLPAGVLLYMVIANIFQAIQTFLL-SQEALPDNLQKILEEQ 352 Query: 574 FSKNYN 579 + Sbjct: 353 LKQQSK 358 Score = 51.5 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ T+ ++L FPL+ S MK QP + + + + Sbjct: 8 NLLIPILDFFYGLVPSYGLAIVALTIVIRLALFPLSAGSIRSARRMKIAQPVMQKRQAEI 67 Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 K + PQ Q+ + +L +PLAGC P+L+Q+P+ FA++ + S Sbjct: 68 KTRYANNPQKQQEELGKLMGEFG-SPLAGCLPLLVQMPILFALFATLRGS 116 >gi|328882679|emb|CCA55918.1| membrane protein [Streptomyces venezuelae ATCC 10712] Length = 243 Score = 65.4 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 89/216 (41%), Gaps = 23/216 (10%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ V+L PL++ I P++ LR+K ++P L+KA+++L+ Sbjct: 28 IVLFTMLVRLAIHPLSRASARGQKARTRIAPELAALRKKHAKNPE-RLKKAVLELHAREK 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA--ADPTNIFTLFGILP 481 ++P AG P LLQ P F +Y + S R A + L AD + + G Sbjct: 87 VSPFAGILPSLLQAPAFLLMYHLFSGD---RMAGHTLFAAPLGDHWADALSHGGVLG--- 140 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKM------------SPPPADKGQAMILNWMPVVFVF 529 G +++ ++ ++ +++ F + P P A ++ + + Sbjct: 141 --PAGRVYLVLFALVAAVATFTYRRTKAQLAAQPLDLGQPTPGAGAIAKVMPLLSFATLI 198 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 +++ P +Y S + ++A + + Sbjct: 199 SVAVVPLAAALYIVTSTAWTAAERAFLFRDQQGPEE 234 >gi|315659748|ref|ZP_07912607.1| membrane protein OxaA [Staphylococcus lugdunensis M23590] gi|315495036|gb|EFU83372.1| membrane protein OxaA [Staphylococcus lugdunensis M23590] Length = 188 Score = 65.4 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 28/140 (20%) Query: 427 LAGCWPILLQIPVFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYL 484 + GC P+L+QIP+ F +Y + S + P + W L + D Sbjct: 56 MFGCLPMLIQIPILFGLYATLKWPTSGGILSHPTFMWFH-LTSPDSM------------- 101 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM----PVVFVFALSSFPAGLII 540 +I F Q +S K Q M+ M P+ ++ P+ L + Sbjct: 102 --------MAMIAGFMYFGQSWLSARQMPKEQRMMGYVMVIVSPLFILYIAFQSPSALAL 153 Query: 541 YWSWSNVISIVQQAVIMKMH 560 YWS + + I+Q + + Sbjct: 154 YWSVNAALLILQTIISQRQT 173 >gi|195435826|ref|XP_002065880.1| GK16110 [Drosophila willistoni] gi|194161965|gb|EDW76866.1| GK16110 [Drosophila willistoni] Length = 362 Score = 65.4 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 70/239 (29%), Gaps = 32/239 (13%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 G ++ + L+ + +T K+ A + Sbjct: 91 YSGLPWWASIVASTLLFRGVVTLPLTIYQHKITARIEKIALEMPA--IVEELKREAAMAK 148 Query: 395 KIDELREKFKQSPPQVLQKAM-IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + +K Q + K +L N +P+ + QIP++ + + M Sbjct: 149 HKFKWSDKQTQVVYRRSIKKQWQKLIVRDNCHPMKTLIVLWGQIPLWIFQSVALRNLVYM 208 Query: 454 RHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 P +GWI +L D + I P + + II Sbjct: 209 LPDPTTLKAQIIATEMTIGGFGWIPNLTVVDQSYIL----------PVALGLINLGIIEL 258 Query: 499 LSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 SM + P + + +V + + P+ L +YW S+ + Q + Sbjct: 259 QSM---TRTRPATRLQNVMNNVFRGLSIVMIPVACTVPSALCVYWVASSSFGLAQNLFL 314 >gi|255028899|ref|ZP_05300850.1| SpoIIIJ protein [Listeria monocytogenes LO28] Length = 160 Score = 65.0 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 3/116 (2%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 Y + + + + G++ + I++ T+ ++LL PL KQ S M N+QPKI EL Sbjct: 45 YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKEL 104 Query: 400 REKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 +EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Y+ IS + E Sbjct: 105 QEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE 160 >gi|300869002|ref|ZP_07113605.1| putative inner membrane protein translocase component YidC [Oscillatoria sp. PCC 6506] gi|300332982|emb|CBN58797.1| putative inner membrane protein translocase component YidC [Oscillatoria sp. PCC 6506] Length = 369 Score = 65.0 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DKGQAMILNWMPVVFVFALSS 533 G + + + + +S+++ +S + QA I PV+F Sbjct: 245 GAIDPDGKIHWDILVMILGFGISLYVNQTLSGQTQGPNDNPQQATINKLTPVIFSGMFLF 304 Query: 534 FP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 FP AG+++Y +N+ VQ A I+ L + +K + Sbjct: 305 FPLPAGVLMYMLVANIFQTVQ-AFILSREPLPDNLQKIVDEAEAKAKKDK 353 Score = 53.5 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 4/108 (3%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE---K 402 M ++ +FY +V ++G+AI+ T+ ++ +PL + MK QP + E E K Sbjct: 1 MLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSLRNMRRMKVAQPLMKERVEQIQK 60 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + P Q+ M ++YK NPLAGC+P+L+Q+PV FA++ + S Sbjct: 61 LHKDNPAKQQEEMSKVYKEFG-NPLAGCFPLLVQMPVLFALFATLRGS 107 >gi|70725620|ref|YP_252534.1| hypothetical protein SH0619 [Staphylococcus haemolyticus JCSC1435] gi|68446344|dbj|BAE03928.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 277 Score = 65.0 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 88/244 (36%), Gaps = 39/244 (15%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 E + + F+ +L N+G+AI++ + ++L+ PL Q + Sbjct: 23 HKEDQHGFFYTIFVKPMDMLLHFLGRTFHENYGLAIIVIVLIIRLVLMPLMFIQVKNIHI 82 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKA--------MIQLYKTHNINP---LAGCWPILLQI 437 M+ + EK + + +++ Y + INP L G PIL+QI Sbjct: 83 MRGKTQVVKPEIEKLQDKLKNADTQEERTAANKLLMKKYNDYGINPFKSLVGTLPILIQI 142 Query: 438 PVFFAIYKVI--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI 495 P+ +Y I S + P + W +L D I Sbjct: 143 PILLGLYACIKYPTSGGIIEHPHFLWF-NLMHTD---------------------LIMTF 180 Query: 496 IMSLSMFIQMKMSPPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 I +L FIQ ++ K + ++ P+ ++A + L +YW+ S I+ Sbjct: 181 IAALLYFIQPLVNAMHYPKEERRTYYVMMVLSPLFIIYASLQSASALSLYWAISATFLII 240 Query: 552 QQAV 555 Q Sbjct: 241 QMHF 244 >gi|224550131|gb|ACN54150.1| 60 kDa inner membrane protein [Wolbachia endosymbiont of Nasonia longicornis] gi|224550135|gb|ACN54152.1| 60 kDa inner membrane protein [Wolbachia endosymbiont of Nasonia giraulti] Length = 125 Score = 65.0 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 1/121 (0%) Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITILPGKSITTTN 306 +W G +DKYW + IP K + K+ + + ++QA F ILPG S +T N Sbjct: 5 EKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNIDKFQADFVRPYTHILPGTSASTLN 64 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 + FAGAK+ + Y+ L IP F+ +D+G YFI KP+F+L+ YF ++ NFG AI+L Sbjct: 65 YFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGKAILL 124 Query: 367 T 367 Sbjct: 125 L 125 >gi|145350968|ref|XP_001419863.1| Oxa1 family transporter: inner membrane ALBINO3 chloroplast [Ostreococcus lucimarinus CCE9901] gi|144580095|gb|ABO98156.1| Oxa1 family transporter: inner membrane ALBINO3 chloroplast [Ostreococcus lucimarinus CCE9901] Length = 427 Score = 65.0 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 18/142 (12%) Query: 422 HNINPLAGCWPILLQIPVFF-AIYKVISISLEMRH----APFWGWIKDLAAADPTNIFTL 476 +P L QIP F A+ V ++ + + W +DL Sbjct: 82 TGAHPAWLVAGPLAQIPFFLCAVMAVRRLAADGANNGLVTGGALWFQDLTVPAVDVAMMT 141 Query: 477 FGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI------LNWMPVVFVFA 530 + P+ GI P++ + ++F + + A + L WM + + Sbjct: 142 APMGPYG-------GILPVLTAAALFANVNANFASAAAQSRGMTIVKLVLEWMTLPMLVI 194 Query: 531 LSSFPAGLIIYWSWSNVISIVQ 552 P + YW S+ ++ Q Sbjct: 195 GMQLPQAVHCYWLTSSAWALAQ 216 >gi|225022040|ref|ZP_03711232.1| hypothetical protein CORMATOL_02072 [Corynebacterium matruchotii ATCC 33806] gi|224945161|gb|EEG26370.1| hypothetical protein CORMATOL_02072 [Corynebacterium matruchotii ATCC 33806] Length = 386 Score = 65.0 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 94/269 (34%), Gaps = 38/269 (14%) Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 I + + ++ + + + ++ FG+ I++ + + + ++ Sbjct: 3 GIFMYPVSGIMKLWHILLHSVLGINDSLAWVLSIFGLIIVVRGLIA-PAQWYILHSGRLT 61 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 I E + + ++ K++ AGC P L+QIPVF +Y+ Sbjct: 62 VMMRPEITALYKEYENETSYEKISERDQREREIRKSYGYRVSAGCIPPLIQIPVFLGLYQ 121 Query: 446 VISISLEMRHAPFWG---WIKDLAAADPTNIFTL-FGILP------FYLPGFMHVG---- 491 V+ ++ I L++AD ++ FG +P F +G Sbjct: 122 VLLRMARPKNGLDSQVHDPIGMLSSADVSSFLHARFGSIPVSAYVSMTPQQFARLGTNYE 181 Query: 492 -----IWPIIMS--LSMFIQMK-------MSPPPADKGQAMILNW---------MPVVFV 528 + P++++ L FI M ++ + +++ +V Sbjct: 182 EVMRFVAPLLLATALITFINMSITVIRNYLTIDHQSRTAIVVMRMVAVATVCTPFLLVSG 241 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIM 557 P ++ YW +N+ ++VQ I Sbjct: 242 GLTGPVPTAIVAYWVANNLWTLVQNVTIY 270 >gi|319893042|ref|YP_004149917.1| short form OxaI-like inner membrane protein translocase component YidC [Staphylococcus pseudintermedius HKU10-03] gi|317162738|gb|ADV06281.1| short form OxaI-like inner membrane protein translocase component YidC [Staphylococcus pseudintermedius HKU10-03] Length = 288 Score = 64.6 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 104/263 (39%), Gaps = 41/263 (15%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK-- 395 + F+ ++ +L N+G+AI++ + V+++ P Y + M+ Sbjct: 33 FNTFVQPMDRLIHWLGDHLNNNYGLAIIIIVLVVRIVLLPFMLSNYKNMHMMREKMKIAK 92 Query: 396 ------IDELREKFKQSPPQVLQKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKV 446 ++++ Q + M+Q+YK +N+NP+A GC P++LQ+P+ ++ V Sbjct: 93 PEITEAQEKVKRARTQEDKMAANQEMMQVYKKYNMNPMASMLGCLPLILQMPIIMGLFFV 152 Query: 447 ISISLE--MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + + W L D + I I + FIQ Sbjct: 153 LKYPSGGGITKYSDFLWFH-LDKPD--------------------IWITTI-AGVLYFIQ 190 Query: 505 MKMSPPPADKGQAMILNWMPVVF----VFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 +S + Q + M ++ V+ S A L +YWS S +VQ + ++ Sbjct: 191 AYVSSFNMPQEQRQMGYMMMIISPIMIVWISFSSAAALGLYWSVSAAFLVVQTYIANVVY 250 Query: 561 G--AEIGLIDRLRSTFSKNYNSQ 581 G A+ + ++ ++ ++ Sbjct: 251 GKKAKEEVAPLIKKFEAEKNGNK 273 >gi|328767547|gb|EGF77596.1| hypothetical protein BATDEDRAFT_27419 [Batrachochytrium dendrobatidis JAM81] Length = 324 Score = 64.6 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 97/313 (30%), Gaps = 51/313 (16%) Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWF--YFIAKPM 346 + E SI +++ + + + FE+ W+ Sbjct: 1 MADAEQQFSSTTSIESSDLSLSPVSLLVNLMDTIHATPLIAFELYSGTPWWLVIVGTTIF 60 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 M + N L + L+ + + + + ++ Sbjct: 61 LRTMCTLPLAIQNKQRTDRLRKLQPVLMAWESTLGLQLKHGHRTGNLQQDKNYKKMASLF 120 Query: 407 --PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI----SLEMRHAPFW- 459 + ++ QLYK + NPL +QIP+F ++ + + P Sbjct: 121 VISGKTYKQKTSQLYKEYRCNPLYTFILPWVQIPLFISMSFALRWLAAFPVIWLGTPSSF 180 Query: 460 ---------GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI------- 503 W DL ADPT I PII+ +M + Sbjct: 181 AAGMDVEGTLWFDDLTVADPTM-------------------ITPIIIG-TMHLINIELNS 220 Query: 504 QMKMSPPPADKGQA----MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ--QAVIM 557 ++ +P M + ++ + + P + +YW S V S++Q +++ Sbjct: 221 TLRSNPNTQRTSGQIAFRMFMRSFAILMIPISAYVPMAITLYWLASAVYSMLQNISFLVI 280 Query: 558 KMHGAEIGLIDRL 570 + H ++ L +++ Sbjct: 281 EKHRVKLSLKEKI 293 >gi|213400723|gb|ACJ47010.1| hypothetical protein [Wolbachia endosymbiont of Folsomia candida] Length = 133 Score = 64.6 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 46/125 (36%), Positives = 65/125 (52%), Gaps = 2/125 (1%) Query: 225 GDKSLVEQKYSDIEKSSISNFHESN-SWLGISDKYWASVFIPSKETSFHSQFKYLS-DGH 282 D L E Y +I K + S +W G +DKYW + IP K + K+ + + Sbjct: 8 FDNKLEEWTYKNIAKKHLVKASTSEKNWFGFADKYWLTAIIPDKSEKINVSIKHTNVNDV 67 Query: 283 ARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFI 342 ++QA F + TILPG S + N FAGAK+ + Y+ L IP F+ ID+G YFI Sbjct: 68 DKFQADFVKSYKTILPGTSASNVNHFFAGAKKLKLLDSYKDSLNIPLFDKAIDFGVLYFI 127 Query: 343 AKPMF 347 KP+F Sbjct: 128 TKPVF 132 >gi|239982031|ref|ZP_04704555.1| hypothetical protein SalbJ_21534 [Streptomyces albus J1074] gi|291453882|ref|ZP_06593272.1| preprotein translocase subunit YidC [Streptomyces albus J1074] gi|291356831|gb|EFE83733.1| preprotein translocase subunit YidC [Streptomyces albus J1074] Length = 250 Score = 64.6 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 19/223 (8%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + AI+L T FV+LL PL++ +QP++ LR+K+K++P LQKA + Sbjct: 24 TASTAAAIVLFTAFVRLLVLPLSRAAARGQKARTRLQPQVVALRKKYKKNPE-RLQKATL 82 Query: 417 QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA-------AD 469 +LY ++P +G P L Q+P FF + + S E+ AP L A D Sbjct: 83 ELYAAEKVSPFSGILPSLCQLPAFF-LMYHLFASAEIGGAPNTLLGHSLFAAPLGDRWKD 141 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPII---------MSLSMFIQMKMSPP-PADKGQAMI 519 LFG V + + ++ S + + P I Sbjct: 142 ALADGGLFGAHGQVYLALFAVVVAVAVYNYRRTKRQLAASAALTAGDTEAMPGMGAMNKI 201 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 M + +F + P +Y S + + V++ V+ + A Sbjct: 202 APLMSFMTLFTVGFVPLAAALYVVTSTLWTAVERTVLYREEPA 244 >gi|225619513|ref|YP_002720770.1| inner membrane protein [Brachyspira hyodysenteriae WA1] gi|225214332|gb|ACN83066.1| inner membrane protein [Brachyspira hyodysenteriae WA1] Length = 996 Score = 64.2 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 93/236 (39%), Gaps = 26/236 (11%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAK----KQYVS 385 F+ML + + + + + G+++ L ++ + L PL Q Sbjct: 3 FDMLYNITIYPIEFIIEILYYLFNNEFRSSSGMSLFLLSLCINFLSLPLYNIAESWQAKE 62 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 A ++P ID ++ +K +L + ++ I G +L+QIP F A Y Sbjct: 63 RAIQDKMKPMIDNIKAVYKGDQRYLLIRTCQRINGYKTIYAFRGTLGLLIQIPFFIAAYN 122 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ- 504 + + + +IKDL+ D G + + + P +M+L + Sbjct: 123 FVHSLTGLNGQS-FLFIKDLSKPD-----------ALIKIGNISINLLPFLMTLFSLLAG 170 Query: 505 ----MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 K+ + L + ++F+ L + P+GL+ YW+ + + S ++ +I Sbjct: 171 FVYARKLKLKESLP-----LYAVSLIFLVLLYTSPSGLLFYWTINCLFSFIKNIII 221 >gi|194751991|ref|XP_001958306.1| GF10853 [Drosophila ananassae] gi|190625588|gb|EDV41112.1| GF10853 [Drosophila ananassae] Length = 352 Score = 64.2 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 71/238 (29%), Gaps = 30/238 (12%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 G ++ + + + + +T K+ A + Sbjct: 82 YTGLPWWGSIVLSTFLFRSVVTLPLTVYQHKITARIEKIALEMPA--IVEELKKEAAMAK 139 Query: 395 KIDELREKFKQSPPQVLQKAM-IQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + + +K Q + K +L N +P+ + Q+P++ + + M Sbjct: 140 QKFKWSDKQTQIVYRRSIKKQWQKLIVRDNCHPMKTLIVLWGQVPLWIFQSVALRNLVYM 199 Query: 454 RHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 P +GWI +L D + I P + + II Sbjct: 200 LPDPMTIQAQIVATELTIGGFGWIPNLTVVDSSYIL----------PVTLGIINLAIIEV 249 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 SM P + + VV V + P+ L +YW S+ + Q ++ Sbjct: 250 QSM--TRTRPPTRLQNIANNVFRGLSVVMVPVACTVPSALCVYWVASSSFGLAQNLLL 305 >gi|71282283|ref|YP_269719.1| hypothetical protein CPS_3020 [Colwellia psychrerythraea 34H] gi|71148023|gb|AAZ28496.1| putative membrane protein [Colwellia psychrerythraea 34H] Length = 216 Score = 64.2 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 88/226 (38%), Gaps = 29/226 (12%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 W +F + + + + + +AI+L T+ +L+ P+ + K + Sbjct: 3 IWNFFTSFIVQSIAFLTHEVGVGEAVAIILFTLIGRLVLMPINLLAMANMYRNKKAISAL 62 Query: 397 DELREKF---KQSPPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVISISL 451 +K + P + K+ + LYK +NI L I Q F +++ + + Sbjct: 63 KPELDKIKVIHKDKPNEIAKSTMALYKKNNIKILDKKSVINIASQGVFGFGMFQALQQIV 122 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 + WI ++A D +++ + + M M P Sbjct: 123 ---FNSKFAWIANIAKPD---------------------VALALLVGVITYFSMIMMPGS 158 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 A++ ++ ++ + L SFP+ + +YW+ S+V S++Q V+ Sbjct: 159 AEQTSTLLFIIPAIICIITLISFPSAIGLYWATSSVTSLLQSLVLN 204 >gi|289524417|ref|ZP_06441271.1| inner membrane insertion protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502344|gb|EFD23508.1| inner membrane insertion protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 65 Score = 64.2 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM---HGAEIGLIDRLRSTFSKNYN 579 P+ +F S P G+++YW S++I +VQQA + + GA+ ++ + + ++ Sbjct: 5 PLFMMFICLSLPGGVLLYWGVSSLIGVVQQAWVQRRASVEGAKKPVLYKEKPRSAEKPK 63 >gi|282901452|ref|ZP_06309377.1| 60 kDa inner membrane insertion protein [Cylindrospermopsis raciborskii CS-505] gi|281193731|gb|EFA68703.1| 60 kDa inner membrane insertion protein [Cylindrospermopsis raciborskii CS-505] Length = 389 Score = 64.2 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 36/108 (33%), Gaps = 6/108 (5%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALSSF 534 G + + I +S++ + + + Q + PV+F F Sbjct: 257 GAIDPDGKIHWDIVGMIIFFGISLYFSQMLSGQNSSGGNPQQETVNKITPVIFSGMFLFF 316 Query: 535 P--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 P AG+++Y NV +Q ++ + L + + + Sbjct: 317 PLPAGVLMYMVIGNVFQTLQTYILSR-EPLPEELQKIVAIQEKEKQAA 363 Score = 53.1 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY + ++G+AI+ T+ ++ +PL+ S M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYGVFPSYGLAIVALTLIIRFALYPLSAGSIRSMRRMRIVQ 60 Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + + K + Q+ + + NPLAGC P+LLQ+PV A++ + S Sbjct: 61 PVMQKRMAEIKERYKDDPQKQQEEMVNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGS 119 >gi|21355539|ref|NP_648286.1| CG4942 [Drosophila melanogaster] gi|7294995|gb|AAF50323.1| CG4942 [Drosophila melanogaster] gi|17862572|gb|AAL39763.1| LD38503p [Drosophila melanogaster] gi|220956584|gb|ACL90835.1| CG4942-PA [synthetic construct] gi|220960106|gb|ACL92589.1| CG4942-PA [synthetic construct] Length = 351 Score = 64.2 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 69/242 (28%), Gaps = 38/242 (15%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 G ++ + + + + +T K+ A + Sbjct: 81 YSGLPWWASIVLSTFLFRSVVTLPLTIYQHKITARIEKIALEMPA--IVEELKKEAAMAK 138 Query: 395 KIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + EK Q + K Q L N +P+ + QIP++ + + M Sbjct: 139 HKFKWSEKQTQIVYRRSIKKQWQNLIVRDNCHPMKTMIVLWGQIPLWIFQSVALRNLVYM 198 Query: 454 RHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 P +GWI +L D + I P + + II Sbjct: 199 LPDPTSIQAQIVTTEMTIGGFGWIPNLTVVDNSYIL----------PVALGLINLAIIEV 248 Query: 499 LSMFIQMKMSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 MS I + VV V + P+ L +YW S+ + Q Sbjct: 249 ------QAMSRTRPSTRLQNIANNVFRGLSVVMVPVACTVPSALCVYWVASSSFGLAQNL 302 Query: 555 VI 556 +I Sbjct: 303 LI 304 >gi|219856430|ref|YP_002473552.1| hypothetical protein CKR_3087 [Clostridium kluyveri NBRC 12016] gi|219570154|dbj|BAH08138.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 220 Score = 63.9 bits (153), Expect = 7e-08, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 98/229 (42%), Gaps = 16/229 (6%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 M + + I + ++ Y +++ G++GI+I+L T+ V+ + P++ KQ S + + Sbjct: 1 MNKERIYMNIILNVLNTVLGYLFSITGDYGISIILLTLIVRTILLPMSLKQRKSIHHQQV 60 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + K++ELR K+K + + + ++ Y N + GC LLQ+PV +++ V + Sbjct: 61 LSKKMEELRIKYKHNKDK--LQREMEKYYKQNTKNMFGCLVTLLQLPVISSLFIVFNKMP 118 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 WI ++ D I + L P F+ P + + K++ Sbjct: 119 AQIGTVIVPWIVNMKMPDNYFIIPIIYTLVSLSPNFISY--IPFLKIVKEVQVQKINLVV 176 Query: 512 ADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ + P + IY + V S+ + VI +++ Sbjct: 177 TS-----------IISMLITFKAPITIGIYLITTGVFSLF-EEVIYRLY 213 >gi|47227450|emb|CAG04598.1| unnamed protein product [Tetraodon nigroviridis] Length = 436 Score = 63.9 bits (153), Expect = 7e-08, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 85/259 (32%), Gaps = 40/259 (15%) Query: 311 GAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTV 369 + + ++ + Y + L+ + + +G I++ TV Sbjct: 96 APTAAEVLQVAATEQSLAELGLA-----GYTPVGLIQNLLEFMHVDIGLPWWGAIVVGTV 150 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-------LYKTH 422 +L FP+ K A + N+ P++ +L + ++ + + K H Sbjct: 151 LARLAVFPVIVKGQREAAKLNNVLPEMTKLTNRMNEAKQSGNKFEFGKAYSDLTLFQKKH 210 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 ++NPL G L+Q P+F + + + + P +L G F Sbjct: 211 DVNPLRGFLVPLVQAPIFISFFIALRKMAYL----------------PVPQRSLGGCSMF 254 Query: 483 YLPGFMHVGIWPIIMSLS--MF---IQMKMSPPPADKGQAMILNWMPVVFV----FALSS 533 + + ++M MF + A Q + + LS+ Sbjct: 255 HCVPGSEGNVLLVLMLFCKPMFHSGFSRIENQFAAHSYQ--VYLLFALSLTKCRLLLLSN 312 Query: 534 FPAGLIIYWSWSNVISIVQ 552 P + YW SN S+ Q Sbjct: 313 APQAVFTYWLTSNCFSLGQ 331 >gi|254431771|ref|ZP_05045474.1| inner membrane protein OxaA [Cyanobium sp. PCC 7001] gi|197626224|gb|EDY38783.1| inner membrane protein OxaA [Cyanobium sp. PCC 7001] Length = 379 Score = 63.9 bits (153), Expect = 7e-08, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 10/89 (11%) Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--PADKGQAMILNWMPVVFVFAL 531 F G + + + G + ++F+ +S P + Q+ PV+ Sbjct: 256 FMTDGSVNWDIAGLVGA------FGATLFLSQILSGMGMPPNPQQSTANKITPVMITAMF 309 Query: 532 SSFP--AGLIIYWSWSNVISIVQQAVIMK 558 FP AG+++Y +N+ +Q ++ + Sbjct: 310 LFFPLPAGVLLYMVVANIFQALQTFLLSR 338 Score = 55.8 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ TV ++L FPL+ + M+ QP + + + + Sbjct: 8 NLLLPILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRNARRMRIAQPVMQKRQAEI 67 Query: 404 KQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 K + PQ Q+ + +L K +PLAGC P+L+Q+P+ FA++ + S Sbjct: 68 KSRYANNPQKQQEELGKLMKEFG-SPLAGCLPLLVQMPILFALFATLRGS 116 >gi|254520700|ref|ZP_05132756.1| inner membrane insertion protein [Clostridium sp. 7_2_43FAA] gi|226914449|gb|EEH99650.1| inner membrane insertion protein [Clostridium sp. 7_2_43FAA] Length = 254 Score = 63.9 bits (153), Expect = 7e-08, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 17/209 (8%) Query: 351 SYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV 410 ++ +AI + T+ ++LL PL K S A M+ IQP+++ +++K+ PQ Sbjct: 27 FNMEPSGVSYVLAIAIFTIIIRLLILPLNIKANRSNARMQEIQPELNAIQKKYAN-DPQK 85 Query: 411 LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAAD 469 +Q + K +N++ GC P LL +P+ FA+Y V P + WI ++ D Sbjct: 86 MQAEYSKCMKENNVSMFGGCLPTLLPLPILFALYYVFMNIDKGSVVHPSFLWIPNVFEKD 145 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF 529 P I + L YLP + + M +N M + Sbjct: 146 PYFIMPVLAFLSTYLPSLL--------------LTKSMPKNENSPMNMGSMNIMMAGMMG 191 Query: 530 AL-SSFPAGLIIYWSWSNVISIVQQAVIM 557 + +F + L+IYW I + Q + Sbjct: 192 VMAINFSSLLVIYWVIGGAIQLAQTYFLN 220 >gi|224550133|gb|ACN54151.1| 60 kDa inner membrane protein [Wolbachia endosymbiont of Nasonia longicornis] Length = 125 Score = 63.9 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 46/121 (38%), Positives = 69/121 (57%), Gaps = 1/121 (0%) Query: 248 SNSWLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQAKFSANEITILPGKSITTTN 306 +W G +DKYW + IP K + K+ + + ++QA F ILP S +T N Sbjct: 5 EKNWFGFADKYWLTAIIPEKSDKINVSIKHTNVNNIDKFQADFVRPYTHILPDTSASTLN 64 Query: 307 FLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIML 366 + FAGAK+ + Y+ L IP F+ +D+G YFI KP+F+L+ YF ++ NFG AI+L Sbjct: 65 YFFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGKAILL 124 Query: 367 T 367 Sbjct: 125 L 125 >gi|119493479|ref|ZP_01624146.1| putative inner membrane protein translocase component YidC [Lyngbya sp. PCC 8106] gi|119452662|gb|EAW33842.1| putative inner membrane protein translocase component YidC [Lyngbya sp. PCC 8106] Length = 335 Score = 63.5 bits (152), Expect = 9e-08, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 10/119 (8%) Query: 471 TNIFTLFGILPFYLPGFMHVGI--WPIIMSLSMFIQMKM-----SPPPADKGQAMILNWM 523 I L + F G +H I + +S+++ + +P + Q I Sbjct: 193 LFIDALGRVGAFDEDGVIHWDIVGMILTFGISLYLNQVLSGQNNTPSSGNPQQDTINKIT 252 Query: 524 PVVFV--FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 PV+F F PAG+++Y +N+ VQ I+ L + K + Sbjct: 253 PVLFTGMFFFFPLPAGVLLYMLIANIFQTVQS-FILSREPLPENLQKIVEEANLKTAKA 310 Score = 39.2 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + + + E ++ + P ++ M ++YK NPLAGC+P++LQ+P+ FA++ Sbjct: 1 MKLTQPLMKERVEKIQQQYKDDPVKQREEMSRVYKELG-NPLAGCFPLVLQMPILFALFA 59 Query: 446 VISIS 450 + S Sbjct: 60 TLRGS 64 >gi|282898270|ref|ZP_06306261.1| 60 kDa inner membrane insertion protein [Raphidiopsis brookii D9] gi|281196801|gb|EFA71706.1| 60 kDa inner membrane insertion protein [Raphidiopsis brookii D9] Length = 389 Score = 63.5 bits (152), Expect = 9e-08, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 36/108 (33%), Gaps = 6/108 (5%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALSSF 534 G + + I +S++ + + + Q + PV+F F Sbjct: 257 GAIDPDGKIHWDIVGMIIFFGISLYFSQMLSGQNSSGGNPQQETVNKITPVIFSGMFLFF 316 Query: 535 P--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 P AG+++Y NV +Q ++ + L + + + Sbjct: 317 PLPAGVLMYMVIGNVFQTLQTYILSR-EPLPEELQKIVAIQEKEKQAA 363 Score = 52.7 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY + ++G+AI+ T+ ++ +PL+ S M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYGVFPSYGLAIVALTLIIRFALYPLSAGSIRSMRRMRIVQ 60 Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + + K + Q+ + + NPLAGC P+LLQ+PV A++ + S Sbjct: 61 PLMQKRMAEIKERYKDDPQKQQEEMVNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGS 119 >gi|322691033|ref|YP_004220603.1| hypothetical protein BLLJ_0843 [Bifidobacterium longum subsp. longum JCM 1217] gi|320455889|dbj|BAJ66511.1| conserved hypothetical protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 198 Score = 63.5 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 11/92 (11%) Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-----SPP-PADKGQ---AMILNW- 522 I FG + + +G+ +M L +F + +P D Q + + Sbjct: 22 IADSFGTV-VSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQFRTQKLTAFV 80 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 P ++V + + P G+++YW +N+ + Q Sbjct: 81 FPAIYVVSGGTLPFGVLLYWLTNNLWNFGQTL 112 >gi|317483126|ref|ZP_07942124.1| yidC1 protein [Bifidobacterium sp. 12_1_47BFAA] gi|316915425|gb|EFV36849.1| yidC1 protein [Bifidobacterium sp. 12_1_47BFAA] Length = 198 Score = 63.5 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 11/92 (11%) Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-----SPP-PADKGQ---AMILNW- 522 I FG + + +G+ +M L +F + +P D Q + + Sbjct: 22 IADSFGTV-VSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQFRTQKLTAFV 80 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 P ++V + + P G+++YW +N+ + Q Sbjct: 81 FPAIYVVSGGTLPFGVLLYWLTNNLWNFGQTL 112 >gi|227547197|ref|ZP_03977246.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212317|gb|EEI80213.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 191 Score = 63.5 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 11/92 (11%) Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-----SPP-PADKGQ---AMILNW- 522 I FG + + +G+ +M L +F + +P D Q + + Sbjct: 15 IADSFGTV-VSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQFRTQKLTAFV 73 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 P ++V + + P G+++YW +N+ + Q Sbjct: 74 FPAIYVVSGGTLPFGVLLYWLTNNLWNFGQTL 105 >gi|23465351|ref|NP_695954.1| hypothetical protein BL0775 [Bifidobacterium longum NCC2705] gi|189439367|ref|YP_001954448.1| preprotein translocase subunit [Bifidobacterium longum DJO10A] gi|322689147|ref|YP_004208881.1| hypothetical protein BLIF_0960 [Bifidobacterium longum subsp. infantis 157F] gi|23325993|gb|AAN24590.1| narrowly conserved hypothetical protein [Bifidobacterium longum NCC2705] gi|189427802|gb|ACD97950.1| Preprotein translocase subunit [Bifidobacterium longum DJO10A] gi|320460483|dbj|BAJ71103.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis 157F] Length = 198 Score = 63.5 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 11/92 (11%) Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM-----SPP-PADKGQ---AMILNW- 522 I FG + + +G+ +M L +F + +P D Q + + Sbjct: 22 IADSFGTV-VSPQSHVVIGVAVALMCLMLFAMQWLLIHRNTPKDAMDSPQFRTQKLTAFV 80 Query: 523 MPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 P ++V + + P G+++YW +N+ + Q Sbjct: 81 FPAIYVVSGGTLPFGVLLYWLTNNLWNFGQTL 112 >gi|78779670|ref|YP_397782.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9312] gi|78713169|gb|ABB50346.1| putative inner membrane protein [Prochlorococcus marinus str. MIT 9312] Length = 380 Score = 63.5 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517 I LAA G + FY+ G ++ I ++ L++ + +S PA+ Q+ Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGAINWDIATLVGAFGLTLLLSQVLSSQGMPANPQQS 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 P++ FP AG+++Y +N+ Q ++ K Sbjct: 296 TANKITPIMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK 338 Score = 50.0 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 62/114 (54%), Gaps = 4/114 (3%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + K + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP + Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMKTR 63 Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + K P+ Q+ + +L +PLAGC P+++Q+P+ FA++ + S Sbjct: 64 QAEIKSKFSGDPKKQQEELGKLMNEFG-SPLAGCLPLIVQMPILFALFATLRGS 116 >gi|67921808|ref|ZP_00515325.1| 60 kDa inner membrane protein [Crocosphaera watsonii WH 8501] gi|67856400|gb|EAM51642.1| 60 kDa inner membrane protein [Crocosphaera watsonii WH 8501] Length = 378 Score = 63.5 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 9/108 (8%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFP 535 G+ + + S++I ++S + Q I P++F FP Sbjct: 257 GVTSDDGTINWDILGMILFFGASIYINQELSGSSGGGAQQQQAINKITPLIFSGMFLFFP 316 Query: 536 --AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 AG+++Y +NV +Q V+M+ L D L+ + ++ Sbjct: 317 LPAGVLMYIVVANVFQTLQTLVLMR-----EPLPDNLQKLLEEQEKAE 359 Score = 57.3 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++L +PL+ Q + M+ Q Sbjct: 1 MDFGIGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRLGLYPLSAGQIRNMRKMRITQ 60 Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + E + + + Q+ + NPLAGC P++LQ+P+ FA++ + S Sbjct: 61 PLMKERQAEIQSRYKDDPAKQQEEMGKLMQQFGNPLAGCLPLVLQMPILFALFATLRGS 119 >gi|157413735|ref|YP_001484601.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9215] gi|157388310|gb|ABV51015.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT 9215] Length = 380 Score = 63.5 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517 I LAA G + FY+ G ++ I ++ L++ + +S PA+ Q+ Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGAINWDIAALVGAFGLTLLLSQVLSSQGMPANPQQS 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 P++ FP AG+++Y +N+ Q ++ K Sbjct: 296 TANKITPIMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK 338 Score = 49.6 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 4/114 (3%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + K + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP + + Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKK 63 Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + K P+ Q+ + +L +PLAGC P+++Q+PV FA++ + S Sbjct: 64 QAEIKSKFSGDPKRQQEELGKLMNEFG-SPLAGCLPLIVQMPVLFALFATLRGS 116 >gi|296119231|ref|ZP_06837800.1| putative membrane protein OxaA [Corynebacterium ammoniagenes DSM 20306] gi|295967752|gb|EFG81008.1| putative membrane protein OxaA [Corynebacterium ammoniagenes DSM 20306] Length = 353 Score = 63.5 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 96/269 (35%), Gaps = 49/269 (18%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 +L F+ + ++I+L + V+ L PL + ++P + Sbjct: 5 HLLTHNFFEEQTAWLVSIVLLVLTVRSLIAPLTWMSVKNGRISALLRPTKAAMPAVTTPE 64 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI----SLE---------- 452 + ++A+ L+K HN NP GC P+L+ +PVF +Y+V+ S E Sbjct: 65 EFEANKEAVDALHKEHNFNPAVGCLPLLIMLPVFLGLYQVVLRMARPSFEGSIGFITADE 124 Query: 453 ---MRHA-------PFWG-----WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 R P + W DLA DP + +P+ + I I Sbjct: 125 VESFRQTTLNGIRIPAFMSMPESWAVDLAV-DPAMVREK--AMPWLILAISFTVINMCIS 181 Query: 498 SLSMFIQMKMSPPPADKGQAMILNW---MPVVFVFALSSF------PAGLIIYWSWSNV- 547 + F + K + + + V L + P +I YW +N+ Sbjct: 182 TTRTFWTTNFNT----KLSRRVFIFSLALIVFIPLLLWNIATNGPIPLAVIFYWFCTNLY 237 Query: 548 ---ISIVQQAVIMKMHGAEIGLIDRLRST 573 ++I+ Q V+ + L + R + Sbjct: 238 TLTLTIICQIVLAVKYPLSPELHEMRRES 266 >gi|256084614|ref|XP_002578522.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Schistosoma mansoni] gi|238663899|emb|CAZ34760.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial), putative [Schistosoma mansoni] Length = 304 Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 74/211 (35%), Gaps = 27/211 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 Y+ + L+ + + I +T+ +++ FP+ +Q A NI P++ Sbjct: 97 NSYWPSGWYQSLLETLHVHLDLPWWGAIAASTILIRMCMFPVMVRQRRHLAEYTNIIPQV 156 Query: 397 DELREKFKQSPPQVLQKAMI-------QLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 L+E ++ M+ QL K +N+NPL + LQ P+F ++ I Sbjct: 157 TVLQESLTRARLSGNYVEMMRTSEKMSQLMKNNNLNPLNTFKYVFLQAPIFLGVFTGIRG 216 Query: 450 SLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM 505 + + W DL A+DP I + + + Sbjct: 217 LVNLPVTSLQTGGTAWFTDLTASDPYCILPFLSM---------SLLLLTFETGA------ 261 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPA 536 ++ + +PVV + + P+ Sbjct: 262 ELRSGQTQPTIRVFSRALPVVGFLFVMNMPS 292 >gi|153956096|ref|YP_001396861.1| hypothetical protein CKL_3499 [Clostridium kluyveri DSM 555] gi|146348954|gb|EDK35490.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] Length = 213 Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 95/222 (42%), Gaps = 16/222 (7%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 I + ++ Y +++ G++GI+I+L T+ V+ + P++ KQ S + + + K++E Sbjct: 1 MNIILNVLNTVLGYLFSITGDYGISIILLTLIVRTILLPMSLKQRKSIHHQQVLSKKMEE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 LR K+K + + + ++ Y N + GC LLQ+PV +++ V + Sbjct: 61 LRIKYKHNKDK--LQREMEKYYKQNTKNMFGCLVTLLQLPVISSLFIVFNKMPAQIGTVI 118 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 WI ++ D I + L P F+ P + + K++ Sbjct: 119 VPWIVNMKMPDNYFIIPIIYTLVSLSPNFISY--IPFLKIVKEVQVQKINLVVTS----- 171 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 ++ + P + IY + V S+ + VI +++ Sbjct: 172 ------IISMLITFKAPITIGIYLITTGVFSLF-EEVIYRLY 206 >gi|91069870|gb|ABE10801.1| putative inner membrane protein [uncultured Prochlorococcus marinus clone ASNC1363] Length = 380 Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSP--PPADKGQA 517 I LAA G + FY+ G ++ I ++ L++ + +S PA+ Q+ Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGAINWDIAALVGAFGLTLLLSQVLSSQGMPANPQQS 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 PV+ FP AG+++Y +N+ Q ++ K Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK 338 Score = 50.0 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 4/114 (3%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + K + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP + + Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKR 63 Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + K P+ Q+ + +L +PLAGC P+++Q+PV FA++ + S Sbjct: 64 QAEIKSKFSGDPKKQQEELGKLMNEFG-SPLAGCLPLIVQMPVLFALFATLRGS 116 >gi|146321574|ref|YP_001201285.1| preprotein translocase subunit YidC [Streptococcus suis 98HAH33] gi|145692380|gb|ABP92885.1| Preprotein translocase subunit YidC [Streptococcus suis 98HAH33] Length = 277 Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 82/209 (39%), Gaps = 36/209 (17%) Query: 339 FYFIAKPMFMLMSYF-YNLVGNFGIAIMLTTVFVKLLF----FPLAKKQYVSTANMKNIQ 393 + ++ +PM L+ +F + FG+AI++ T+ V+ + + K + + M ++ Sbjct: 59 WDWLGQPMSNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYLK 118 Query: 394 PKIDELREKFKQSPPQVLQ----KAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVI 447 P + ++E+ K + Q Q + K + ++ L GC P+L+Q+P F AIY Sbjct: 119 PILGPIQERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIY--- 175 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 RH P L + I ++ + + Q + Sbjct: 176 ---FAARHTPGISEATFLG-----------------INLGSTSLILTVVAGILYYAQSLL 215 Query: 508 SPPPADKGQAMILNWMPVV--FVFALSSF 534 D+ Q + M ++ + + SF Sbjct: 216 MQVGMDEEQKKQMKTMALMNPIMIMMFSF 244 >gi|126696725|ref|YP_001091611.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9301] gi|126543768|gb|ABO18010.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT 9301] Length = 380 Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSP--PPADKGQA 517 I LAA G + FY+ G ++ I ++ L++ + +S PA+ Q+ Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGAINWDIAALVGAFGLTLLLSQVLSSQGMPANPQQS 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 PV+ FP AG+++Y +N+ Q ++ K Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK 338 Score = 50.0 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 4/114 (3%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + K + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP + + Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKR 63 Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + K P+ Q+ + +L +PLAGC P+++Q+PV FA++ + S Sbjct: 64 QAEIKSKFSGDPKKQQEELGKLMNEFG-SPLAGCLPLIVQMPVLFALFATLRGS 116 >gi|254423008|ref|ZP_05036726.1| 60Kd inner membrane protein [Synechococcus sp. PCC 7335] gi|196190497|gb|EDX85461.1| 60Kd inner membrane protein [Synechococcus sp. PCC 7335] Length = 434 Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 10/100 (10%) Query: 490 VGIWPIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFP--AGLII 540 + I LS+++ +++ P + Q I + P++F FP AG+++ Sbjct: 271 ILGMIIFFGLSLYVSQQVTNSGNAASPDGQNDQQQAIAKFTPIIFSGMFLFFPLPAGVLM 330 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 Y +NV Q I+ L + + K +S Sbjct: 331 YMVIANVFQTAQS-FILSREPLPENLQKLVDAQEKKAASS 369 Score = 51.9 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 69/121 (57%), Gaps = 6/121 (4%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN-- 391 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + MK Sbjct: 1 MDFGIGFLSNNVMLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSIRNMRKMKIAN 60 Query: 392 --IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +Q ++ E++E++K P + Q+ + +Y NPLAGC+P++LQ+P+ FA++ + Sbjct: 61 PLMQKRMAEVKERYKDDPVK-QQEEIKDIYSEFG-NPLAGCFPVVLQMPILFALFATLRG 118 Query: 450 S 450 S Sbjct: 119 S 119 >gi|170595401|ref|XP_001902368.1| 60Kd inner membrane protein [Brugia malayi] gi|158589999|gb|EDP28783.1| 60Kd inner membrane protein [Brugia malayi] Length = 322 Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 88/253 (34%), Gaps = 26/253 (10%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 A K+F + + +++ W + + + +N+ + + ++ T Sbjct: 42 LALVKDFHLFDFLGGNSLVKEYDLFSWWSPASWFRLALEYV---HFNIDLPWWLTVICAT 98 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKT------- 421 + ++LL + + A ++ + +IDE +EK + + ++ K Sbjct: 99 ISLRLLMIFVPIASHRLMARVQLYKKEIDEFKEKMESAQRNGNFLQTMETQKELKDFLKT 158 Query: 422 HNINPLAGCWPILLQIPVF----FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF 477 NI + L +F A+ K+ ++ W KDL DP + L Sbjct: 159 KNIKLYRQFVFMSLNGAIFMTQFIAVKKMADVAFPGMSTGGLYWFKDLTVPDPYYLLPLV 218 Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 + + + + + + Q ++ P++ + + Sbjct: 219 SAITVAAVFKIGAE-----TGGT-------NQGVSPQIQKLLTRIGPIMVFACSTKVSSV 266 Query: 538 LIIYWSWSNVISI 550 + +YW SN+IS+ Sbjct: 267 IALYWCTSNMISV 279 >gi|254525383|ref|ZP_05137435.1| inner membrane protein OxaA [Prochlorococcus marinus str. MIT 9202] gi|221536807|gb|EEE39260.1| inner membrane protein OxaA [Prochlorococcus marinus str. MIT 9202] Length = 380 Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKGQA 517 I LAA G + FY+ G ++ I ++ L++ + +S PA+ Q+ Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGAINWDIAALVGAFGLTLLLSQVLSSQGMPANPQQS 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 P++ FP AG+++Y +N+ Q ++ K Sbjct: 296 TANKITPIMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK 338 Score = 49.6 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 4/114 (3%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + K + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP + + Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKK 63 Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + K P+ Q+ + +L +PLAGC P+++Q+PV FA++ + S Sbjct: 64 QAEIKSKFSGDPKKQQEELGKLMNEFG-SPLAGCLPLIVQMPVLFALFATLRGS 116 >gi|194477174|ref|YP_002049353.1| putative inner membrane protein translocase component YidC [Paulinella chromatophora] gi|171192181|gb|ACB43143.1| putative inner membrane protein translocase component YidC [Paulinella chromatophora] Length = 382 Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 6/102 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSPP--PADKGQA 517 I LAA G + Y G ++ + + + +S+F+ +S PA+ Q+ Sbjct: 236 IPGLAARSGFLFIKALGQVGLYTEGQVNWDIVVLVLAFGISLFVSQFLSGMGMPANPQQS 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIM 557 PV+ FP AG+++Y +N+ +Q ++ Sbjct: 296 TANKLTPVMITGMFLFFPLPAGVLLYMVIANIFQALQTFILT 337 Score = 54.2 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 17/178 (9%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + + + + Sbjct: 8 NLLLPILDFFYGLVPSYGLAIIALTVVIRLALFPLSAGSIRSARRMRIAQPVMQKRQAEI 67 Query: 404 ---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG 460 + PQ Q+ + +L +PLAGC P+++Q+P+ FA++ + S P+ Sbjct: 68 KTRYANNPQKQQEELGKLMNEFG-SPLAGCLPLIVQMPILFALFATLRGSP-FADVPYTL 125 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS------------LSMFIQMK 506 +K L A T + T P + PI S S+++Q K Sbjct: 126 NLKVLNADQITAVETKPFTGPSHSIFISETSHIPISASLPAGTKLGIGEQASIYLQTK 183 >gi|84618151|emb|CAJ20055.1| Cox18Hs1 protein [Homo sapiens] Length = 253 Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 60/163 (36%), Gaps = 31/163 (19%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFW-------- 459 + +++ + +LY N +P + +Q+P++ + + S H+ + Sbjct: 70 KNMRRLISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRNLSTGAAHSEGFSVQEQLAT 129 Query: 460 ---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 W DL A D T I + + + + K+ Q Sbjct: 130 GGILWFPDLTAPDSTWIL---------PISVGVINLLIVEICAL----QKIGMSR---FQ 173 Query: 517 AMILNW---MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 I + M V+ + ++ P+ +++YW S+ + + Q ++ Sbjct: 174 TYITYFVRAMSVLMIPIAATVPSSIVLYWLCSSFVGLSQNLLL 216 >gi|195490963|ref|XP_002093362.1| GE20802 [Drosophila yakuba] gi|194179463|gb|EDW93074.1| GE20802 [Drosophila yakuba] Length = 351 Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 69/242 (28%), Gaps = 38/242 (15%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 G ++ + + + + +T K+ A + Sbjct: 81 YSGLPWWASIVLSTFLLRSVVTLPLTIYQHKITARIEKIALEMPA--IVEELKKEAAMAK 138 Query: 395 KIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + E+ Q + K Q L N +P+ + QIP++ + + M Sbjct: 139 HKFKWSEQQTQIVYRRSIKKQWQNLIVRDNCHPMKTMIVLWGQIPLWIFQSVALRNLVYM 198 Query: 454 RHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 P +GWI +L D + I P + + II Sbjct: 199 LPDPTSIQAQIVTTEMTIGGFGWIPNLTVVDNSYIL----------PVALGLINLAIIEV 248 Query: 499 LSMFIQMKMSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 MS I + VV V + P+ L +YW S+ + Q Sbjct: 249 ------QAMSRTRPSTRLQNIANNVFRGLSVVMVPVACTVPSALCVYWVASSSFGLAQNL 302 Query: 555 VI 556 +I Sbjct: 303 LI 304 >gi|195012049|ref|XP_001983449.1| GH15574 [Drosophila grimshawi] gi|193896931|gb|EDV95797.1| GH15574 [Drosophila grimshawi] Length = 352 Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 75/260 (28%), Gaps = 34/260 (13%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 G ++ A + + + +T ++ A + Sbjct: 82 YSGLPWWAAIVLSTFLFRSVVTLPLTIYQHKITARIEQIALEMPA--IVEELKREAAMAK 139 Query: 395 KIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + +K Q K Q L N +P+ + QIP++ + + M Sbjct: 140 HKFKWSDKQTQIVYSRSIKKQWQNLIVRDNCHPMKTLIVLWGQIPLWIFQSVALRNLVYM 199 Query: 454 RHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 P +GWI +L+ D + I P + + II Sbjct: 200 LPDPTTLKAQIIATELTIGGFGWIPNLSVVDSSYIL----------PVTLGLINLAIIEV 249 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-- 556 +M P + + VV V + P+ L +YW S+ + Q ++ Sbjct: 250 QAM--TRTRPPTRLQNIFNNVFRGLSVVMVPIACTVPSALCVYWVASSSFGLAQNLLLLS 307 Query: 557 --MKMHGAEIGLIDRLRSTF 574 M+ L + + Sbjct: 308 PEMRRAVGIPKTKTELEAPY 327 >gi|126661516|ref|ZP_01732565.1| putative inner membrane protein translocase component YidC [Cyanothece sp. CCY0110] gi|126617201|gb|EAZ88021.1| putative inner membrane protein translocase component YidC [Cyanothece sp. CCY0110] Length = 378 Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 9/108 (8%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFP 535 G++ + + S++I ++S + Q I P++F FP Sbjct: 257 GVVNDDGTINYDILGMILFFGASIYINQELSGSSGGGAQQQQAINKITPLLFSGMFLFFP 316 Query: 536 --AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 AG+++Y +NV +Q ++M+ L + L+ + ++ Sbjct: 317 LPAGVLMYIVVANVFQTLQTLILMR-----EPLPENLQKLLEEQEKAE 359 Score = 57.3 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 66/120 (55%), Gaps = 4/120 (3%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ Q + M+ Q Sbjct: 1 MDFGIGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRFGLYPLSAGQIRNMRKMRITQ 60 Query: 394 PKIDELR---EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + E + ++ + P Q+ M +L + NPLAGC P+LLQ+P+ FA++ + S Sbjct: 61 PLMKERQADIQRRYKDDPTKQQEEMGKLMQEFG-NPLAGCLPLLLQMPILFALFATLRGS 119 >gi|221053328|ref|XP_002258038.1| hypothetical protein in Plasmodium species [Plasmodium knowlesi strain H] gi|193807871|emb|CAQ38575.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] Length = 452 Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 30/245 (12%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 ++ +++ +L ++ +I+ TT F++++ PL K + P Sbjct: 163 NYESSWYVELVHELLNCTKIMFDCSWMASIVATTSFMRMVILPLTVSAERDRRKQKILNP 222 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTH---------NINPLAGCWPILLQIPVFFAIYK 445 I EL K K + K ++ K ++ P + Q P+FF Y Sbjct: 223 LIKELTNKLKSNAQDGNIKMALEFKKKILNIRNTHGISLIPKSIIMMAFFQTPLFFIFYF 282 Query: 446 VI---SISLEMRHAPFW---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 + + E+ + W+ L+ DP I L L + I + Sbjct: 283 SMKKMASYPEVFKEFTFESPLWLDSLSLPDPYYILPLLSSLLLLSNNELTALIDKALS-- 340 Query: 500 SMFIQMKMSPPPADKG--QAMI-------LNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 K S P D+ Q + + + F S P+GL+IY + + Sbjct: 341 ----NSKSSSLPGDESEFQKKMKHVSKLAMRLFYISSFFFFKSMPSGLLIYLITNTFFQL 396 Query: 551 VQQAV 555 + + Sbjct: 397 LTTQI 401 >gi|123968912|ref|YP_001009770.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. AS9601] gi|123199022|gb|ABM70663.1| Putative inner membrane protein [Prochlorococcus marinus str. AS9601] Length = 380 Score = 62.7 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSP--PPADKGQA 517 I LAA G + FY+ G ++ I ++ L++ + +S PA+ Q+ Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGAVNWDIAALVGAFGLTLLLSQVLSSQGMPANPQQS 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 PV+ FP AG+++Y +N+ Q ++ K Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK 338 Score = 50.0 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 4/114 (3%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + K + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP + + Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKK 63 Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + K P+ Q+ + +L +PLAGC P+++Q+PV FA++ + S Sbjct: 64 QAEIKSKFSGDPKKQQEELGKLMNEFG-SPLAGCLPLIVQMPVLFALFATLRGS 116 >gi|331225811|ref|XP_003325576.1| hypothetical protein PGTG_07409 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309304566|gb|EFP81157.1| hypothetical protein PGTG_07409 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 461 Score = 62.7 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 38/282 (13%), Positives = 80/282 (28%), Gaps = 40/282 (14%) Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI----DWGWFYFIAK 344 TI P + T+ + + + E+ Sbjct: 93 VEKPAETITPITAPETSLSTPVEPQLDQILESTSASQELAALELEHGFLGRCTSGAIENV 152 Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE--- 401 + + I+ + + + + ++ KI +++E Sbjct: 153 LCTLHDQLALPWFLTIPVVIVGLRTVLIPINVWSMRIGARNMIVKPSLDLKISKIKELQT 212 Query: 402 KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-- 459 + +Q Q + K PLA LLQ +F + + + H P Sbjct: 213 RGEQHKALAAQNELRAFMKQEGFRPLAPLGLPLLQGSLFVSFFWALREM-GSHHLPSLTT 271 Query: 460 ---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ----MKMSPPPA 512 W DL A P P+I S + +M A Sbjct: 272 EGALWFTDLTLAGPWYG-------------------LPLIASGLTLLSVETASEMGGLKA 312 Query: 513 DKGQAMILNWMPVVF---VFALSSFPAGLIIYWSWSNVISIV 551 + Q ++ ++ V ++ P+ + +YW +N+ S++ Sbjct: 313 GQSQ-KVMWFLRAVIVGTLWLFHDLPSAVFLYWCTNNMFSLL 353 >gi|56750083|ref|YP_170784.1| putative inner membrane protein translocase component YidC [Synechococcus elongatus PCC 6301] gi|81300426|ref|YP_400634.1| putative inner membrane protein translocase component YidC [Synechococcus elongatus PCC 7942] gi|56685042|dbj|BAD78264.1| preprotein translocase YidC subunit [Synechococcus elongatus PCC 6301] gi|81169307|gb|ABB57647.1| inner membrane protein-like [Synechococcus elongatus PCC 7942] Length = 392 Score = 62.7 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 33/70 (47%), Gaps = 4/70 (5%) Query: 493 WPIIMSLSMFIQMKMSP--PPADKGQAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVI 548 + +S+++ ++S + Q + PV+F FP AG+++Y +N+ Sbjct: 270 LVLAFGVSLYVSQQLSSQGAAPNPQQDQVNKITPVLFSGMFLFFPLPAGVLMYMVIANIF 329 Query: 549 SIVQQAVIMK 558 +Q ++M+ Sbjct: 330 QTLQTFILMR 339 Score = 55.0 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 71/120 (59%), Gaps = 4/120 (3%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + + M ++ +FY LV ++G+AI+ T+ +++ +PL+ + M+ Sbjct: 1 MDFGIGFLSSNVMLPILDFFYGLVPSYGLAIIALTLVIRIALYPLSAGAIRNARRMRIAN 60 Query: 394 PKIDELREKFKQ---SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + + +++ ++ + P LQ+ +L+K NPLAGC+P+LLQ+P+ FA++ + S Sbjct: 61 PVMQKRQQEIRERYANDPSKLQEETAKLFKEFG-NPLAGCFPLLLQMPLLFALFATLRGS 119 >gi|22298143|ref|NP_681390.1| putative inner membrane protein translocase component YidC [Thermosynechococcus elongatus BP-1] gi|38503003|sp|Q8DL96|OXAA_THEEB RecName: Full=Inner membrane protein oxaA gi|22294322|dbj|BAC08152.1| tll0600 [Thermosynechococcus elongatus BP-1] Length = 401 Score = 62.7 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 47/121 (38%), Gaps = 16/121 (13%) Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNW 522 + D F G + + + + + +S+++ +S + + Q + Sbjct: 264 ITLPDGARQFNW-GAIHWD------ILVMILGFGVSLYVNQLLSGQGSSNNPQQQTVNQL 316 Query: 523 MPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 P++F FP AG+++Y +N+ VQ ++ + L + L+ + + Sbjct: 317 TPIIFSGMFLFFPLPAGVLLYMLIANIFQTVQTFILQR-----EPLPENLQKLVEEQERA 371 Query: 581 Q 581 + Sbjct: 372 E 372 Score = 52.3 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ V+ +PL+ + MK +Q Sbjct: 1 MDFGIGFLSNNVMLPILDFFYGIVPSYGLAIVALTLVVRFAVYPLSAGSIRNMRRMKVVQ 60 Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + + + + K Q+ + NPLAGC+P+LLQ+P+ FA++ + S Sbjct: 61 PIMQKRMQEIQQKYKDNPAEQQKAMAEVYREFGNPLAGCFPLLLQLPILFALFATLRGS 119 >gi|255528515|ref|ZP_05395299.1| 60 kDa inner membrane insertion protein [Clostridium carboxidivorans P7] gi|255507797|gb|EET84253.1| 60 kDa inner membrane insertion protein [Clostridium carboxidivorans P7] Length = 217 Score = 62.7 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 84/214 (39%), Gaps = 17/214 (7%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 I ++S +N G++GI+I+ T+ V+++ P + KQ N + I KI + Sbjct: 1 MNIIFNLFNQILSSIFNFTGDWGISIIFLTILVRIILIPFSIKQKSEMYNQQRISQKIQD 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++ K+K + K Y+ GC +Q+P+ F +Y V+ Sbjct: 61 IKSKYKNNE--KRIKEETIKYEQQLAKSTLGCLVTFIQLPILFTLYNVVMKMPVQVGTII 118 Query: 459 WGWIKDLAAADPTNIFT-LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 W+ + +D + ++G++ ++ + ++ + K+S Sbjct: 119 LPWVSSIKLSDSYYVVPIIYGLISICPQLITNLDYFKVLKEV------KLSKTN------ 166 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 L + + P L +Y+ +++ ++ Sbjct: 167 --LIITSIFSILITIKAPIALGLYFITTSLFTLF 198 >gi|254540218|ref|NP_001028482.2| mitochondrial inner membrane protein COX18 isoform 2 [Mus musculus] gi|148673382|gb|EDL05329.1| COX18 cytochrome c oxidase assembly homolog (S. cerevisiae), isoform CRA_a [Mus musculus] Length = 331 Score = 62.7 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 70/194 (36%), Gaps = 43/194 (22%) Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + + + + + + +++ + +LY N +P + +Q+P++ Sbjct: 122 RLNQEVAVCARQFGWSKRVARLTYLKNMRRLISELYVRDNCHPFKATVLVWVQLPMWV-- 179 Query: 444 YKVISISLEMRH------------------APFWGWIKDLAAADPTNIFTLFGILPFYLP 485 IS+ +R+ A W DL A D T I Sbjct: 180 ----FISVALRNLSTGATHSDGISVQEQLAAGGTLWFPDLTAVDSTWIL---------PV 226 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYW 542 V + + +F K+ + Q + N++ V+ + ++ P+ L++YW Sbjct: 227 SVGVVNLLIV----EIFALQKI---GTSRFQMYVTNFVRAVSVLMIPVAATVPSALVLYW 279 Query: 543 SWSNVISIVQQAVI 556 S+++ + Q ++ Sbjct: 280 LCSSLMGLAQNLLL 293 >gi|186682017|ref|YP_001865213.1| inner membrane protein translocase component YidC [Nostoc punctiforme PCC 73102] gi|186464469|gb|ACC80270.1| 60 kDa inner membrane insertion protein [Nostoc punctiforme PCC 73102] Length = 383 Score = 62.3 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 35/105 (33%), Gaps = 6/105 (5%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALSSF 534 G + + +S+++ + + + Q + PV+F F Sbjct: 257 GAQDADGTIHWDIVAMIVFFGISLYVSQMLSGQNSSGGNPQQDTVNKITPVIFSGMFLFF 316 Query: 535 P--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 P AG+++Y N+ Q ++ + L + + + Sbjct: 317 PLPAGVLMYMVIGNIFQTAQTYLLSR-EPLPEELQKIVETQEKET 360 Score = 53.5 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ V+ +PL+ + M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYGIVPSYGLAIVALTLIVRFALYPLSAGSIRNMRKMRIVQ 60 Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + + K + Q+ + + NPLAGC+P+L+Q+PV A++ + S Sbjct: 61 PLMQKRMAEIKERYKDEPQKQQEEMVNVQKEFGNPLAGCFPLLVQMPVLLALFATLRGS 119 >gi|33863638|ref|NP_895198.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9313] gi|38502916|sp|Q7V610|OXAA_PROMM RecName: Full=Inner membrane protein oxaA gi|33635221|emb|CAE21546.1| Putative inner membrane protein; similar to 60 kDa inner membrane protein family [Prochlorococcus marinus str. MIT 9313] Length = 378 Score = 62.3 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 7/123 (5%) Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKG 515 G I LAA G + FY+ G ++ I ++ L++ + +S PA+ Sbjct: 234 GKIPGLAAQSGFLFIKALGQVGFYVDGEINWDIAILVGGFGLTLLVSQILSGRGLPANPQ 293 Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 Q+ PV+ FP AG+++Y +N+ Q ++ + L L Sbjct: 294 QSTANKITPVMITGMFLFFPLPAGVLLYMVIANIFQAGQTFLLSR-EALPENLQKILNDQ 352 Query: 574 FSK 576 SK Sbjct: 353 LSK 355 Score = 55.0 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + + +++ Sbjct: 8 NILLPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPAMKKRQDEI 67 Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 K PQ Q+ + ++ K NPL+GC P+L+Q+P+ FA++ + S Sbjct: 68 KSRYAKDPQKQQEELGKVMKEFG-NPLSGCLPLLVQMPILFALFATLRGS 116 >gi|124022319|ref|YP_001016626.1| inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9303] gi|123962605|gb|ABM77361.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT 9303] Length = 377 Score = 62.3 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 8/126 (6%) Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSPP--PADKG 515 G I LAA G + FY+ G ++ I ++ L++ + +S PA+ Sbjct: 234 GKIPGLAAQSGFLFIKALGQVGFYVDGEINWDIAILVGGFGLTLLVSQILSGRGLPANPQ 293 Query: 516 QAMILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 Q+ PV+ FP AG+++Y +N+ Q ++ + A + ++ + Sbjct: 294 QSTANKITPVMITGMFLFFPLPAGVLLYMVIANIFQAGQTFLLSR--EALPENLQKILNE 351 Query: 574 FSKNYN 579 Sbjct: 352 QQSKPA 357 Score = 54.6 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 63/110 (57%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ TV ++L FPL+ S M+ QP + + +++ Sbjct: 8 NILLPILDFFYGLVPSYGLAIVALTVVIRLALFPLSAGSIRSARRMRIAQPAMKKRQDEI 67 Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 K PQ Q+ + ++ K NPL+GC P+L+Q+P+ FA++ + S Sbjct: 68 KSRYAKDPQKQQEELGKVMKEFG-NPLSGCLPLLVQMPILFALFATLRGS 116 >gi|300855851|ref|YP_003780835.1| hypothetical protein CLJU_c26750 [Clostridium ljungdahlii DSM 13528] gi|300435966|gb|ADK15733.1| putative membrane protein [Clostridium ljungdahlii DSM 13528] Length = 213 Score = 62.3 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 95/214 (44%), Gaps = 17/214 (7%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 I + L+++ +N G++GIA+++ T+ VK+L P++ KQ S + + K+++ Sbjct: 1 MNIIFNLLGALLNHVFNFTGDWGIAVVVLTLIVKVLLMPMSMKQRFSILKQQKVAKKMED 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++ ++K ++ +K + YK N+ + GC ++Q+P+ +YK I + Sbjct: 61 IKIRYKNDKLKM-EKEIQNCYKD-NLKSMMGCLLTIIQLPIIGGLYKTIINMPVVSGTVL 118 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 W+ + +D I + + LPG ++ + + + Sbjct: 119 IPWVASIKLSDSYFIVPIMYSIISMLPGLVNSIDYFKVYREVQY--------------NK 164 Query: 519 ILNWMPVVF-VFALSSFPAGLIIYWSWSNVISIV 551 + +P V + P L +Y+ S+V S+V Sbjct: 165 MSAILPGVIGLLITIKAPIALGLYFITSSVFSLV 198 >gi|256392377|ref|YP_003113941.1| hypothetical protein Caci_3193 [Catenulispora acidiphila DSM 44928] gi|256358603|gb|ACU72100.1| 60 kDa inner membrane insertion protein [Catenulispora acidiphila DSM 44928] Length = 243 Score = 62.3 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 84/247 (34%), Gaps = 24/247 (9%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP---LAKKQY 383 +P +L + A ++ +AI++ T V+L P Sbjct: 1 MPFSSLLTPAIVAAYHAVTGLSVLLVPVLGGLGPAVAIVMFTAAVRLCLHPLNRAQMNSQ 60 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 +++ + + ++ + P Q+ ++LY+ + + G L+QIPVFF + Sbjct: 61 LASQEQRTALAPAVQKLQRKYKKDPARAQRETLELYRANGVKLAPGIGLGLVQIPVFFVV 120 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLF--------GILPFYLPGFMHVGIWPI 495 Y++ +P G + +D L G + + Sbjct: 121 YRLFV-------SPTIGGHHNGLLSDQLFGVGLGSHFRDAFSGSSALLGHVAVFAVLIAA 173 Query: 496 IMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 + L+ + +M A ++ MP + V + P +Y + + + ++V+ Sbjct: 174 LAVLATWSSRRM--RAGAAATAKLMALMPYLTVLSAVVLPLASGLYAATTTLWTLVE--- 228 Query: 556 IMKMHGA 562 + Sbjct: 229 -RRRMTV 234 >gi|254540220|ref|NP_001156928.1| mitochondrial inner membrane protein COX18 isoform 1 [Mus musculus] gi|148673384|gb|EDL05331.1| COX18 cytochrome c oxidase assembly homolog (S. cerevisiae), isoform CRA_c [Mus musculus] Length = 332 Score = 62.3 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 70/195 (35%), Gaps = 44/195 (22%) Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + + + + + + +++ + +LY N +P + +Q+P++ Sbjct: 122 RLNQEVAVCARQFGWSKRVARLTYLKNMRRLISELYVRDNCHPFKATVLVWVQLPMWV-- 179 Query: 444 YKVISISLEMRH-------------------APFWGWIKDLAAADPTNIFTLFGILPFYL 484 IS+ +R+ A W DL A D T I Sbjct: 180 ----FISVALRNLSTGATHSDAGISVQEQLAAGGTLWFPDLTAVDSTWIL---------P 226 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIY 541 V + + +F K+ + Q + N++ V+ + ++ P+ L++Y Sbjct: 227 VSVGVVNLLIV----EIFALQKI---GTSRFQMYVTNFVRAVSVLMIPVAATVPSALVLY 279 Query: 542 WSWSNVISIVQQAVI 556 W S+++ + Q ++ Sbjct: 280 WLCSSLMGLAQNLLL 294 >gi|83305207|sp|Q8VC74|COX18_MOUSE RecName: Full=Mitochondrial inner membrane protein COX18; Flags: Precursor gi|74217643|dbj|BAE33563.1| unnamed protein product [Mus musculus] gi|148877831|gb|AAI45729.1| COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) [Mus musculus] gi|187957590|gb|AAI38973.1| COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) [Mus musculus] Length = 331 Score = 61.9 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 70/194 (36%), Gaps = 43/194 (22%) Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + + + + + + +++ + +LY N +P + +Q+P++ Sbjct: 122 RLNQEVAVCARQFGWSKRVARLTYLKNMRRLVSELYVRDNCHPFKATVLVWVQLPMWV-- 179 Query: 444 YKVISISLEMRH------------------APFWGWIKDLAAADPTNIFTLFGILPFYLP 485 IS+ +R+ A W DL A D T I Sbjct: 180 ----FISVALRNLSTGATHSDGISVQEQLAAGGTLWFPDLTAVDSTWIL---------PV 226 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYW 542 V + + +F K+ + Q + N++ V+ + ++ P+ L++YW Sbjct: 227 SVGVVNLLIV----EIFALQKI---GTSRFQMHVTNFVRAVSVLMIPVAATVPSALVLYW 279 Query: 543 SWSNVISIVQQAVI 556 S+++ + Q ++ Sbjct: 280 LCSSLMGLAQNLLL 293 >gi|289807605|ref|ZP_06538234.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 157 Score = 61.9 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 38/130 (29%), Gaps = 8/130 (6%) Query: 64 ALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAE 123 A + +K L +IN +G + L Y ++ SN P L + + Y A+ Sbjct: 30 ASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNEPFQLL--ETTPQFIYQAQ 87 Query: 124 LDYVSTANNIELPNSNTVWNLISGKIL-----TPTTPIKLVFKNANNILFERTISLD-EH 177 N + + + + +A F +T Sbjct: 88 SGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNELQVPMTYTDAAGNTFTKTFVFKRGD 147 Query: 178 YLFKIVDTVT 187 Y + +V Sbjct: 148 YAVNVNYSVQ 157 >gi|321311061|ref|YP_004193390.1| membrane protein OxaA [Mycoplasma haemofelis str. Langford 1] gi|319802905|emb|CBY93551.1| membrane protein OxaA [Mycoplasma haemofelis str. Langford 1] Length = 379 Score = 61.9 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 94/301 (31%), Gaps = 18/301 (5%) Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + Y D + F ++ G + + Sbjct: 57 TYTNYHPDPGVGLEFGFLPSDNGTGTGDVKFDLGSWSIAGPRYHAFYRPTWIYGPFLSWF 116 Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + + + F ++++ F++ + F + + Sbjct: 117 VYPVAYVFMNLMWFFHKFPELEENGLYVIFSMLIIMFFMRFVTFWTTLRSSIYQEKQLLH 176 Query: 393 QPKIDELREKFKQSPPQ------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 Q ID + K+ + + + YK HN+ PLA + PVF ++KV Sbjct: 177 QSAIDAISSKYDKYDITDKQARLKKHQELSAYYKKHNLKPLAILENFFINTPVFLIVFKV 236 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS--LSMFIQ 504 I+I ++ I DL+ T IF F + + I S S+++ Sbjct: 237 ITICRPIKF-TVLLNIWDLSKTPLTTIFDDFLNEGWMYLVLCLIIIPTNFFSQKTSIWLS 295 Query: 505 M------KMSPPPADKG---QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 K + + I M VF+ + GL IY+ +++V +I Q + Sbjct: 296 QARHPSLKKNIVDKNSQTYKMQRIQKVMTFVFLLFTFFWSTGLAIYYFFNSVFTIFQNLI 355 Query: 556 I 556 I Sbjct: 356 I 356 >gi|75909641|ref|YP_323937.1| putative inner membrane protein translocase component YidC [Anabaena variabilis ATCC 29413] gi|75703366|gb|ABA23042.1| 60 kDa inner membrane insertion protein [Anabaena variabilis ATCC 29413] Length = 380 Score = 61.9 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 39/109 (35%), Gaps = 7/109 (6%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALSSF 534 G + + + +S++ + + + Q + PV+F F Sbjct: 257 GAIDPDNTIHWDIVGMIVFFGISLYFSQMLSGQNSSGGNPQQDTVNKITPVIFSGMFLFF 316 Query: 535 P--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 P AG+++Y NV +Q ++ + I ++ T K ++ Sbjct: 317 PLPAGVLMYMVIGNVFQTLQTYILSR--EPLPEEIQKIVETQEKQAQAE 363 Score = 54.6 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 4/120 (3%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY++V ++G+AI+ T+ ++ +PL+ Q + M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQ 60 Query: 394 PKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + + + + PQ Q+ M+ + K NPLAGC P+LLQ+PV A++ + S Sbjct: 61 PLMQKRMAEIKERYKDDPQKQQEEMMNVQKEFG-NPLAGCLPLLLQMPVLLALFATLRGS 119 >gi|297292746|ref|XP_001104459.2| PREDICTED: mitochondrial inner membrane protein COX18-like [Macaca mulatta] Length = 334 Score = 61.9 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 31/244 (12%), Positives = 76/244 (31%), Gaps = 53/244 (21%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + +I+L+TV ++ + + Sbjct: 71 LLGVQATTGLPWWGSILLSTVALRGAVTLPLAAYQHYILAKVENLQPEIKAIARHLNQEV 130 Query: 409 -------------------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +++ + +LY N +P + +Q+P++ + + Sbjct: 131 VVRANQLGWSERVARLTYLKNMKRIISELYVRDNCHPFKATVLVWIQLPMWIFMSFALRN 190 Query: 450 -SLEMRHA------------PFWGWIKDLAAADPTNIFTL----FGILPFYLPGFMHVGI 492 S H+ W DL A D T I + +L + ++GI Sbjct: 191 LSTGAAHSEAGFSVQEQLATGGILWFPDLTAPDSTWILPISVGVINLLIVEISALQNIGI 250 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + F+ M V+ + ++ P+ +++YW S+ + + Q Sbjct: 251 SRLQTYATYFV-----------------RAMSVLMIPVAATVPSSIVLYWLCSSFMGLSQ 293 Query: 553 QAVI 556 ++ Sbjct: 294 NLLL 297 >gi|291234764|ref|XP_002737317.1| PREDICTED: CG4942-like [Saccoglossus kowalevskii] Length = 333 Score = 61.9 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 79/248 (31%), Gaps = 40/248 (16%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 E D+ + A + + + F + ++LL +A+ + Sbjct: 65 LETGHDFTNLPWWASIILTTFALRTAVTLPFAVYQHYIFARLELLQPQIAQYGRQLQVYV 124 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K + + + K + ++K + LY NI+P + +Q+P++ I + Sbjct: 125 KQKEVDENWGKNKSRVYFKMQMKKVVTALYIRDNIHPFKASLLLWVQLPMWVFISFALRN 184 Query: 450 S---------------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 + W DL DP I P Sbjct: 185 MTGAFPGKVAQEFGPLVPSMATEGALWFPDLTLPDPF-------------------VILP 225 Query: 495 IIMSLSMFI---QMKMSPPPADKGQAMI---LNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 II+ LS + + K Q I + V V + P G+ +YW+ S+V Sbjct: 226 IILGLSNLLVIEMHALRSTKPTKWQGRITNLFRFFSVAMVPLAAYLPTGMSLYWASSSVY 285 Query: 549 SIVQQAVI 556 + Q ++ Sbjct: 286 GLGQNLLL 293 >gi|156052557|ref|XP_001592205.1| hypothetical protein SS1G_06444 [Sclerotinia sclerotiorum 1980] gi|154704224|gb|EDO03963.1| hypothetical protein SS1G_06444 [Sclerotinia sclerotiorum 1980 UF-70] Length = 565 Score = 61.9 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 37/320 (11%), Positives = 92/320 (28%), Gaps = 53/320 (16%) Query: 259 WASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEF--P 316 ++ + + + + A + + T+T + Sbjct: 144 FSQSITRPAPSKANILIRNATSIRFASTAPSAIPPVDSPIPSIETSTPEFKPTPLDVTAD 203 Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFV-KLLF 375 + + + + M ++ + + L G + +++ Sbjct: 204 INPDILSAPEHIGYLHSLGLDYGWGPTAIMEWMLEHIHVLAGTPWWVSIGIAAAAWRVIL 263 Query: 376 FPLAKKQYVSTANMK-------NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA 428 F + + M +Q ++ + R + + + + ++YK I+ Sbjct: 264 FKPYLDAAENASRMATIKEFTAPVQAQMMQARTRGDTTEMMFHRAELQRIYKRAGISMWK 323 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFW----------GWIKDLAAADPTNIFTLFG 478 P+ +QI + + +K+ +R W +L DP Sbjct: 324 SFVPM-VQIFIGYGTWKL------LRQMSDIPVPGLLDGGVLWFYNLTIPDPYY------ 370 Query: 479 ILPFYLPGFMHVGIWPII-----MSLSMFIQMKMSPPPADKGQAMILNW-MPVVFVFALS 532 +LP +H ++ +S G ++ W MP + + S Sbjct: 371 LLPLATSAILHF----VLKKGGETGVSTLT----------PGMLYMMQWGMPALSMVFTS 416 Query: 533 SFPAGLIIYWSWSNVISIVQ 552 PA + + S+ IS Q Sbjct: 417 FMPAAVQFSFLMSSSISFGQ 436 >gi|309805164|ref|ZP_07699216.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 09V1-c] gi|308165398|gb|EFO67629.1| membrane protein insertase, YidC/Oxa1 family [Lactobacillus iners LactinV 09V1-c] Length = 207 Score = 61.9 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 70/187 (37%), Gaps = 31/187 (16%) Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 K + L + +++YK +N++ + GC P+L+Q+P+ IY+ ++ S + + F Sbjct: 1 MKKNSNKQMQLSQLQMKIYKDNNMSMIGGMGCLPLLIQLPIMIGIYQAVAYSKTLASSSF 60 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 G + P + + I+ IQ +S + Q Sbjct: 61 MG-------------------ISLSKPSIVFAVVAAILY----LIQGYLSLIGISEQQKQ 97 Query: 519 ILNW----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 + P++ + + L +Y+ ++ ++QQ + + + + Sbjct: 98 TMLITVIASPLMTLVFSIMYSGALGLYFLVGGIVIVIQQLIATFILM--PKVRADVDKEL 155 Query: 575 SKNYNSQ 581 +K+ + Sbjct: 156 TKHPIKE 162 >gi|195326213|ref|XP_002029824.1| GM25116 [Drosophila sechellia] gi|194118767|gb|EDW40810.1| GM25116 [Drosophila sechellia] Length = 351 Score = 61.9 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 70/242 (28%), Gaps = 38/242 (15%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 G ++ + + ++ + +T K+ A + Sbjct: 81 YSGLPWWASIVLSTVLFRSVVTLPLTIYQHKITARIEKIALEMPA--IVEELKKEAAMAK 138 Query: 395 KIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + EK Q + K Q L N +P+ + QIP++ + + M Sbjct: 139 HKFKWSEKQTQIVYRRSIKKQWQNLIVRDNCHPMKTMIVLWGQIPLWIFQSVALRNLVYM 198 Query: 454 RHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 P +GWI +L D + I P + + II Sbjct: 199 LPDPTSIQAQIVTTEMTVGGFGWIPNLTVVDHSYIL----------PVALGLINLAIIEV 248 Query: 499 LSMFIQMKMSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 MS I + VV V + P+ + +YW S+ + Q Sbjct: 249 ------QAMSRTRPSTRLQNIANNVFRGLSVVIVPVACTVPSAICVYWVASSSFGLAQNL 302 Query: 555 VI 556 +I Sbjct: 303 LI 304 >gi|219519411|gb|AAI45480.1| Cox18 protein [Mus musculus] Length = 332 Score = 61.5 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 70/195 (35%), Gaps = 44/195 (22%) Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + + + + + + +++ + +LY N +P + +Q+P++ Sbjct: 122 RLNQEVAVCARQFGWSKRVARLTYLKNMRRLVSELYVRDNCHPFKATVLVWVQLPMWV-- 179 Query: 444 YKVISISLEMRH-------------------APFWGWIKDLAAADPTNIFTLFGILPFYL 484 IS+ +R+ A W DL A D T I Sbjct: 180 ----FISVALRNLSTGATHSDAGISVQEQLAAGGTLWFPDLTAVDSTWIL---------P 226 Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIY 541 V + + +F K+ + Q + N++ V+ + ++ P+ L++Y Sbjct: 227 VSVGVVNLLIV----EIFALQKI---GTSRFQMHVTNFVRAVSVLMIPVAATVPSALVLY 279 Query: 542 WSWSNVISIVQQAVI 556 W S+++ + Q ++ Sbjct: 280 WLCSSLMGLAQNLLL 294 >gi|322783219|gb|EFZ10805.1| hypothetical protein SINV_06351 [Solenopsis invicta] Length = 421 Score = 61.5 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 35/281 (12%), Positives = 85/281 (30%), Gaps = 33/281 (11%) Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 ++ + +I + +F + K + + ++ G Sbjct: 102 SSQYYNSVRYLSNASIDSIAETQVPMQFSGIFKVISESAPIKVVQDYLLLVHDYTGLPWW 161 Query: 363 AIMLTTVFVKLLFFPL-------------------AKKQYVSTANMKNIQPKIDELREKF 403 ++++ T + L + N +K+ Sbjct: 162 SVIMLTTIIMRTTVTLPLSLYQLYIFGKLENLKTEMDEIVKEMKKEINYGTHKYNWSKKY 221 Query: 404 KQSPPQVLQKAMI-QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 K +L N +PL +L+QIP++ ++ S+ +R+ + Sbjct: 222 ATRLYNHSVKKQWNKLIVRENCHPLKASLLVLVQIPMWISL------SMSIRNLCYMLPK 275 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW 522 +D +A T G L + P+ M L ++++ K + Sbjct: 276 QDSSAYAIYQELTTDGFLWLSNLTIPDPFVLPLAMGLFNLAIIEITCMSKVKELTKWQRY 335 Query: 523 MP-------VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + + + S P+ L +YW+ S+ + Q ++ Sbjct: 336 LTHFFRVVAIGMIPVAMSVPSCLSLYWATSSAFGLFQNLIL 376 >gi|296196355|ref|XP_002745786.1| PREDICTED: mitochondrial inner membrane protein COX18-like [Callithrix jacchus] Length = 334 Score = 61.5 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 72/243 (29%), Gaps = 51/243 (20%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP 408 L+ + I+L+TV ++ + K Sbjct: 71 LLGVHATTGLPWWGGILLSTVALRGAVTLPLAAYQHYILAKVENLQPEIKTIAKHLNQEV 130 Query: 409 -------------------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + +++ + ++Y N +P + +QIPV+ + + Sbjct: 131 AVRASQLGWSKRVARLTYLKNMRRLVSEVYVRDNCHPFKATVLVWIQIPVWVFMSVALRN 190 Query: 450 S-------------LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 E W DL A D T I + + + Sbjct: 191 FSTGATHSEAGFSVPEQLATGGILWFPDLTAPDSTWIL---------PISVGVINLLIV- 240 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++ K+ Q I ++ V+ + ++ P+ L++YW S+++ + Q Sbjct: 241 ---EIYALQKIGMSR---FQTYITYFVRAVSVLMIPIAAAMPSSLVLYWLCSSLMGLSQN 294 Query: 554 AVI 556 ++ Sbjct: 295 LLL 297 >gi|302698045|ref|XP_003038701.1| hypothetical protein SCHCODRAFT_231532 [Schizophyllum commune H4-8] gi|300112398|gb|EFJ03799.1| hypothetical protein SCHCODRAFT_231532 [Schizophyllum commune H4-8] Length = 423 Score = 61.5 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 86/232 (37%), Gaps = 23/232 (9%) Query: 333 LIDWGWFYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + +Y A + + F L + I++ T+ ++ FP + + M+ Sbjct: 160 AMGLTAWYTPAGLVRWTLQVFNVTLGLPWFWTIVVGTLLWRVSMFPFHLQSIRNGQKMRK 219 Query: 392 IQPKIDELREKFKQSPP-------QVLQKAMIQLYKTHNINPLAGCWPILLQIPV----F 440 + P++ ++R++ ++ Q M QL +++NPL P + +P F Sbjct: 220 VNPEMQKIRDEINEAKKTQDVLALQRGIMKMQQLNAKYDVNPLKLMAPGFINLPFTLGLF 279 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 F + ++ ++ + + DL DP I +F +L L I Sbjct: 280 FGVKRLCEEVPQLA-VSGFSLLPDLTVTDPYWILPMFSVLLIQLQIRASAADGSI----- 333 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ PA I+ +V + L+ G+++ ++ +Q Sbjct: 334 -----DLTTSPAMPHVMNIMRLFSIVTIPLLAKLHIGVLVSLVTQSLFMTLQ 380 >gi|218437889|ref|YP_002376218.1| inner membrane protein translocase component YidC [Cyanothece sp. PCC 7424] gi|218170617|gb|ACK69350.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 7424] Length = 381 Score = 61.5 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 68/120 (56%), Gaps = 4/120 (3%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ Q + M+ Q Sbjct: 1 MDFGVGFISTNIMLPILDFFYRIVPSYGFAIIALTLVIRFALYPLSAGQIRNMRKMRITQ 60 Query: 394 PKIDELRE---KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + E +E K ++ PQ Q+ M +L + NPLAGC P+L+Q+P+ FA++ + S Sbjct: 61 PLMKERQEEIQKRYKNDPQKQQEEMGKLMQEFG-NPLAGCLPLLVQMPILFALFATLRGS 119 Score = 60.8 bits (145), Expect = 6e-07, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 43/110 (39%), Gaps = 11/110 (10%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP----PADKGQAMILNWMPVVFVFALSS 533 G + + + +S++I ++S + Q + PV+F Sbjct: 257 GAVSDDGKIHWDILGMVLFFGISIYINQELSGSKSGGANAQQQQAVNKITPVIFSGMFLF 316 Query: 534 FP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 FP AG+++Y +N+ +Q ++M+ L + L+ + ++ Sbjct: 317 FPLPAGVLMYIVVANIFQTIQTVILMR-----EPLPENLQKLLEQQEKTE 361 >gi|298709029|emb|CBJ30979.1| Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus siliculosus] Length = 342 Score = 61.5 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 70/168 (41%), Gaps = 17/168 (10%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 +FG+AI+ T+ VK L PL Q S+ MK +QP + E+ KF Q+ A + Sbjct: 129 QSFGLAIVTFTLGVKTLLVPLQAIQLQSSEKMKVLQPTVKEINAKFGQNKE-AATAATNR 187 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF-WGWIKDLAAADPTNIFTL 476 LY +NPL GC P LLQ PVF +Y+ I A + W+ L F Sbjct: 188 LYAETKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVASEGFLWLPSLQGP----TFEN 243 Query: 477 FGILPFYLPGFMHVGIW-----------PIIMSLSMFIQMKMSPPPAD 513 + + I P I+ LS + M + PP D Sbjct: 244 GRGIGWLTTFVDGHPILGWHDTLCYMSIPAILVLSQKLSMTLLTPPDD 291 >gi|154483919|ref|ZP_02026367.1| hypothetical protein EUBVEN_01625 [Eubacterium ventriosum ATCC 27560] gi|149735410|gb|EDM51296.1| hypothetical protein EUBVEN_01625 [Eubacterium ventriosum ATCC 27560] Length = 365 Score = 61.5 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 13/85 (15%) Query: 486 GFMHVGIWPIIMSLSMFI----QMKMSPP---------PADKGQAMILNWMPVVFVFALS 532 + I PI+ L + K++ P + MP++ V+ Sbjct: 188 TIVVALIIPILAGLFQLLSVQLTTKINSAASSANMADNPMAGSMKAMNIMMPLMSVYMCW 247 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIM 557 AG+ +YW +++ I+QQ I Sbjct: 248 ILSAGIGLYWMAGSLVMILQQIFIN 272 Score = 42.3 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPLA 428 +L P+ KQ T + P+I E+++K+K Q +Q+ + +Y + +P Sbjct: 1 MLMLPMTIKQQKFTKLNAAMNPEIQEIQKKYKDKKNQQSQLAMQEEIKSVYDKYGTSPTG 60 Query: 429 GCWPILLQIPVFFAIYKVISI 449 C +++Q+P+ FA+Y+VI Sbjct: 61 SCLQLIIQMPILFALYRVIMN 81 >gi|172036279|ref|YP_001802780.1| putative inner membrane protein translocase component YidC [Cyanothece sp. ATCC 51142] gi|171697733|gb|ACB50714.1| putative 60 kD inner membrane insertion protein [Cyanothece sp. ATCC 51142] Length = 378 Score = 61.5 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 9/108 (8%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA--DKGQAMILNWMPVVFVFALSSFP 535 G++ + + S++I ++S + Q I P++F FP Sbjct: 257 GVVNDDGTINYDILGMILFFGASIYINQELSGSSGGGAQQQQAINKITPLLFSGMFLFFP 316 Query: 536 --AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 AG+++Y +NV +Q V+M+ L + L+ + ++ Sbjct: 317 LPAGVLMYIVVANVFQTLQTLVLMR-----EPLPENLQKLLEEQEKTE 359 Score = 57.7 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ Q + M+ Q Sbjct: 1 MDFGIGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRFGLYPLSAGQIRNMRKMRITQ 60 Query: 394 PKIDELREKFKQS--PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + E + + ++ Q+ + NPLAGC P+LLQ+P+ FA++ + S Sbjct: 61 PLMKERQAEIQRRYKDDPTKQQEEMGKLMQEFGNPLAGCLPLLLQMPILFALFATLRGS 119 >gi|213407700|ref|XP_002174621.1| inner membrane protein cox18 [Schizosaccharomyces japonicus yFS275] gi|212002668|gb|EEB08328.1| inner membrane protein cox18 [Schizosaccharomyces japonicus yFS275] Length = 212 Score = 61.2 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 69/231 (29%), Gaps = 43/231 (18%) Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + + + I + ++ + +Q ++ + +++ Sbjct: 9 HSFLPWSVGIPAFAICLRTCITLPIAIASKRR-RERLLQIHSLLTSKRNQLVSKDAIKQE 67 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF----WGWIKDLAAADP 470 +LY +P + QIP F + + M + W ++L DP Sbjct: 68 KRRLYSEFRCSPWPLLLLPMAQIPCFAYATLKLRRLVRMAPSSMTTEGAFWFQNLLEPDP 127 Query: 471 TNIFTLFGILPFYLPGFMH------------VGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 T + T+ L + + I I+ S +M +S Sbjct: 128 TGLLTVSLGLAYMTNAAIVHRRQQFSGLSKGTFIASILSSFAMIYVASLS---------- 177 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 P+ + +YWS S + S +Q A++ + D+ Sbjct: 178 ----------------PSAMTLYWSTSALYSTIQNALLYRNDTPSEPAKDK 212 >gi|123966591|ref|YP_001011672.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. MIT 9515] gi|123200957|gb|ABM72565.1| Putative inner membrane protein [Prochlorococcus marinus str. MIT 9515] Length = 379 Score = 61.2 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 7/124 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSP--PPADKGQA 517 I LAA G + FY+ G ++ I ++ L++ + +S P++ Q+ Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGSINWDIATLVGAFGLTLLLSQVLSSQGMPSNAQQS 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFS 575 PV+ FP AG+++Y +N+ Q ++ K L L Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK-EALPSNLQKILDEQLI 354 Query: 576 KNYN 579 Sbjct: 355 NKNK 358 Score = 50.0 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 4/114 (3%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + K + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP + + Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKR 63 Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + K P+ Q+ + +L +PLAGC P+++Q+PV FA++ + S Sbjct: 64 QAEIKSKFSGDPKKQQEELGKLMNEFG-SPLAGCLPLIVQMPVLFALFATLRGS 116 >gi|313900860|ref|ZP_07834350.1| putative stage III sporulation protein J [Clostridium sp. HGF2] gi|312954280|gb|EFR35958.1| putative stage III sporulation protein J [Clostridium sp. HGF2] Length = 331 Score = 61.2 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 97/251 (38%), Gaps = 27/251 (10%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F +D GWF + + F + GI I+ T ++LL F + K V++ M Sbjct: 81 FSDAMDEGWFNGLIVWPIAFLINFVADFSDAGIGIIAATFLIQLLIFLFSIKSQVASQRM 140 Query: 390 KNIQPKIDELREKF----KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 ++IQP++++++ K+ + M LY + INP +Q PV +Y+ Sbjct: 141 QSIQPEMNKIQAKYAGKTDDRSKMQQAQEMQALYSKYKINPFGTLLVTFIQFPVILGMYQ 200 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS-MFIQ 504 + + F G +L A P F L +Y+ F+ + + ++ ++Q Sbjct: 201 ATMRAYSVVTGSFQG--INL-AKTPIEGFNLGDY--WYIVIFVLMVAFQLLSFKMPQWLQ 255 Query: 505 -----------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 K M++ + ++P G+ YW +++ Sbjct: 256 EHRKKKMHVKEKKYAEPKKKGGNGMMGSMNMMMYMSTGMIAIFAINWPLGMSFYWLVNSL 315 Query: 548 ISIVQQAVIMK 558 ++Q VI K Sbjct: 316 ARVIQNIVIHK 326 >gi|125980279|ref|XP_001354164.1| GA18542 [Drosophila pseudoobscura pseudoobscura] gi|54642468|gb|EAL31216.1| GA18542 [Drosophila pseudoobscura pseudoobscura] Length = 350 Score = 61.2 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 91/313 (29%), Gaps = 43/313 (13%) Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 I + T+ + + + R A A ++ S F + P + + Sbjct: 15 IAATYTNGYLRASTPNGTPDRRLASTEAAAASVQLANSGDLVGFWQTLSNSTPVAYMQDA 74 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 + I + L W +++ + + A + Sbjct: 75 LIQIHDYSNLPWWSSIVLSTFLFRGVITLPLTIYQHKITARIERIALEMPALV------- 127 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFA 442 + + + +K + K Q L N +P+ + QIP++ Sbjct: 128 EELKREAAMARQKFKWSDKETSIVYRRSIKKQWQNLIVRDNCHPMKTIIVLWGQIPLWIF 187 Query: 443 IYKVISISLEMRHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGF 487 + + M P +GWI +L D + I + G Sbjct: 188 QSVALRNLVYMLPDPTTLQAQITATEMTIGGFGWIPNLTVVDSSYILPV-------TLGL 240 Query: 488 MHVGIWPIIMSLSMFIQMKMS----PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 +++GI + M+ P + + VV V + P+ L +YW Sbjct: 241 LNLGIIEL---------QAMTRTRPPTRLQSIANHVFRGLSVVMVPVACTVPSALCVYWV 291 Query: 544 WSNVISIVQQAVI 556 S+ + Q ++ Sbjct: 292 ASSTFGLAQNMLL 304 >gi|298490101|ref|YP_003720278.1| YidC/Oxa1 family lipolytic protein ['Nostoc azollae' 0708] gi|298232019|gb|ADI63155.1| membrane protein insertase, YidC/Oxa1 family ['Nostoc azollae' 0708] Length = 383 Score = 61.2 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 35/96 (36%), Gaps = 6/96 (6%) Query: 490 VGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALSSFP--AGLIIYWSW 544 + + +S+++ + + + Q + PV+F FP AG+++Y Sbjct: 269 IVAMIVFFGISLYVSQMLSGQNSSGGNPQQDTVNKITPVIFSGMFLFFPLPAGVLMYMVI 328 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 N+ +Q ++ + L + + + Sbjct: 329 GNIFQTLQTYILSR-EPLPEELQKLVVLQDKEKEAA 363 Score = 55.4 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 2/119 (1%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY ++G+AI+ T+ ++ +PL+ S M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYGFFPSYGLAIVALTLIIRFALYPLSAGSIRSMRRMRVVQ 60 Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + K + Q+ + + NPLAGC P+LLQ+PV A++ + S Sbjct: 61 PVMQRRMAEIKERYKDDPQKQQEEMVNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGS 119 >gi|195174552|ref|XP_002028037.1| GL15036 [Drosophila persimilis] gi|194115759|gb|EDW37802.1| GL15036 [Drosophila persimilis] Length = 350 Score = 60.8 bits (145), Expect = 6e-07, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 92/313 (29%), Gaps = 43/313 (13%) Query: 264 IPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEK 323 I + T+ + + + R A A ++ S F + P Y + Sbjct: 15 IAATYTNGYLRASTPNGTPDRRLASTEAAAASVQLANSGDLVGFWQTLSNSTPV--AYMQ 72 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 D I + ++ + + + + +T ++ A Sbjct: 73 DALIQIHDYSN---LPWWSSIVLSTFLFRGVITLPLTIYQQKITARIERIALEMPA--LV 127 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFA 442 + + + +K + K Q L N +P+ + QIP++ Sbjct: 128 EELKREAAMARQKFKWSDKETSIVYRRSIKKQWQNLIVRDNCHPMKTIIVLWGQIPLWIF 187 Query: 443 IYKVISISLEMRHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGF 487 + + M P +GWI +L D + I + G Sbjct: 188 QSVALRNLVYMLPDPTTLQAQITATEMTIGGFGWIPNLTVVDSSYILPV-------TLGL 240 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWS 543 +++GI + M+ I + VV V + P+ L +YW Sbjct: 241 LNLGIIEL---------QAMTRTRPPTRLQNIANHVFRGLSVVMVPVACTVPSALCVYWV 291 Query: 544 WSNVISIVQQAVI 556 S+ + Q ++ Sbjct: 292 ASSTFGLAQNMLL 304 >gi|307152649|ref|YP_003888033.1| membrane protein insertase, YidC/Oxa1 family [Cyanothece sp. PCC 7822] gi|306982877|gb|ADN14758.1| membrane protein insertase, YidC/Oxa1 family [Cyanothece sp. PCC 7822] Length = 382 Score = 60.8 bits (145), Expect = 6e-07, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 68/120 (56%), Gaps = 4/120 (3%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ Q + M+ Q Sbjct: 1 MDFGVGFISTNIMLPILDFFYRIVPSYGFAIIALTLVIRFALYPLSAGQIRNMRKMRITQ 60 Query: 394 PKIDELRE---KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + E +E K ++ PQ Q+ M ++ + NPLAGC P+LLQ+P+ FA++ + S Sbjct: 61 PLMKERQEEIQKRYKNDPQKQQEEMSKIMQEFG-NPLAGCLPLLLQMPILFALFATLRGS 119 Score = 52.7 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 12/111 (10%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-----ILNWMPVVFVFALS 532 G + + + +S++I ++S A + PV+F Sbjct: 257 GAVNDDGSINWDILGMVLFFGISIYINQELSGSQTGASNAQQQQQAVNKITPVIFSAMFL 316 Query: 533 SFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 FP AG+++Y +N+ +Q ++M+ L + L+ + ++ Sbjct: 317 FFPLPAGVLMYIVVANIFQTIQTVILMR-----EPLPENLQKLVEQQEKTE 362 >gi|115947368|ref|XP_784727.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115959211|ref|XP_001193818.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 340 Score = 60.8 bits (145), Expect = 6e-07, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 81/256 (31%), Gaps = 34/256 (13%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 ++ A F+ + + + ++ +AI + V++ Sbjct: 39 LLNSQPVHFAESIFQYVHSVTGLPW--WATVVATTFTLRFSLTLPLAIYSQNIRVRVENL 96 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV-----LQKAMIQLYKTHNINPLAGCW 431 + ++ + +EK+ + Q +++ +LY N +P G Sbjct: 97 QPEVIALAKRSFVERFAARA--KQEKWSEKRAQRAFVGLVRRYSKELYVRDNCHPAKGSI 154 Query: 432 PILLQIPVFFAIYKVISISLE-----MRHAPFW-----GWIKDLAAADPTNIFT-LFGIL 480 L+Q+P++ + + M P W L DPT I L G+L Sbjct: 155 LFLVQLPMWIFLSLALRNMTGALSERMYVVPDLATGGTLWFPSLIVPDPTFILPVLVGVL 214 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + +Q ++ L + VV + + P+ + + Sbjct: 215 NLSNIEMHALHK-----GRVTRVQRYVNNS---------LRTLSVVMIPIAAYMPSAMAL 260 Query: 541 YWSWSNVISIVQQAVI 556 YWS S + Q ++ Sbjct: 261 YWSVSAFYGLGQNILL 276 >gi|224007887|ref|XP_002292903.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971765|gb|EED90099.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 426 Score = 60.8 bits (145), Expect = 6e-07, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 64/173 (36%), Gaps = 15/173 (8%) Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL 451 + + + + S + + +++ H +N L L+QIPVF+ I + Sbjct: 60 VMDGMVREAAQAQMSLLKTTVATLRGIFRLHKVNLLDIFKSPLMQIPVFWYFAIDIRKII 119 Query: 452 -----EMRHA---PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + + WI DL DP + L Y VG + S Sbjct: 120 NGSDPALAQQLVDSSFLWITDLTEPDPWYGLPIITGLLLYWNVETAVGKKAL--SGETSS 177 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q +M+ D Q+ + V ++ P+G+ IY + S + S++Q + Sbjct: 178 QSRMALFLKDAFQS-----LAVFMPCFMAQQPSGVQIYLTTSMLFSLLQSMAM 225 >gi|17230907|ref|NP_487455.1| putative inner membrane protein translocase component YidC [Nostoc sp. PCC 7120] gi|38503115|sp|Q8YRM9|OXAA_ANASP RecName: Full=Inner membrane protein oxaA gi|17132548|dbj|BAB75114.1| alr3415 [Nostoc sp. PCC 7120] Length = 380 Score = 60.8 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 7/109 (6%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALSSF 534 G + + + +S+++ + + + Q + PV+F F Sbjct: 257 GAIDPDNTIHWDIVGMIVFFGISLYVSQMLSGQNSSGGNPQQDTVNKITPVIFSGMFLFF 316 Query: 535 P--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 P AG+++Y NV +Q ++ + I ++ T K ++ Sbjct: 317 PLPAGVLMYMVIGNVFQTLQTYILSR--EPLPEEIQKIVETQEKQAVAE 363 Score = 55.0 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 4/120 (3%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY++V ++G+AI+ T+ ++ +PL+ Q + M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQ 60 Query: 394 PKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + + + + PQ Q+ M+ + K NPLAGC P+LLQ+PV A++ + S Sbjct: 61 PLMQKRMAEIKERYKDDPQKQQEEMMNVQKEFG-NPLAGCLPLLLQMPVLLALFATLRGS 119 >gi|239931058|ref|ZP_04688011.1| membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291439429|ref|ZP_06578819.1| membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291342324|gb|EFE69280.1| membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 239 Score = 60.8 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 23/215 (10%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T V+LL PL++ +QPKI ELR + +P + LQ+A++ L+ Sbjct: 28 IVLFTALVRLLVHPLSRAAARGQKARAALQPKIAELRRRHGGNPEK-LQRAVLDLHAREK 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVI-SISLEMRHAPFWGWIKDLAAADPTNIFT--LFGIL 480 ++PL+GC P L Q+P FF +Y + S ++ R G +L AA +T L Sbjct: 87 VSPLSGCLPSLFQLPAFFLLYHLFSSGTIGGRDNELLG--HELFAAPLGGRWTDALGAGG 144 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQ--MKMSPP------------PADKGQAMILNWMPVV 526 PF PG ++ G++ ++ ++ F K S G A + +P + Sbjct: 145 PFGGPGLVYAGLFALVAVVAAFGYRLTKRSMAANAAAAGGGSGEQQVPGMAAMTRALPFM 204 Query: 527 FVFALSS---FPAGLIIYWSWSNVISIVQQAVIMK 558 L + P +Y S S+V++AV+ + Sbjct: 205 SFLTLVTVAVVPLAAALYVVTSTTWSVVERAVLYR 239 >gi|309778005|ref|ZP_07672947.1| stage III sporulation protein J [Erysipelotrichaceae bacterium 3_1_53] gi|308914294|gb|EFP60092.1| stage III sporulation protein J [Erysipelotrichaceae bacterium 3_1_53] Length = 331 Score = 60.4 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 96/251 (38%), Gaps = 27/251 (10%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 F ID GWF + + F + GI I+ T ++LL F + K V++ M Sbjct: 81 FSDAIDEGWFNGLIVWPIAFLINFVADFSDAGIGIIAATFLIQLLIFLFSIKSQVASQRM 140 Query: 390 KNIQPKIDELREKF----KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 + IQP++++++ K+ + M LY + INP +Q PV +Y+ Sbjct: 141 QAIQPEMNKIQAKYAGKTDDRSKMQQAQEMQALYSKYKINPFGTLLVTFIQFPVILGMYQ 200 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS-MFIQ 504 + + F G +L A P F L +Y+ F+ + + ++ ++Q Sbjct: 201 ATMRAYSVVTGSFQG--INL-AKTPIEGFNLGNY--WYVVIFVLMVAFQLLSFKMPQWLQ 255 Query: 505 -----------------MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 K M++ + ++P G+ YW +++ Sbjct: 256 EHRKKKLNIKEKKYAEPKKKGGNGMMGSMNMMMYMSTGMIAIFAINWPLGMSFYWLVNSL 315 Query: 548 ISIVQQAVIMK 558 ++Q VI K Sbjct: 316 ARVIQNIVIHK 326 >gi|150018481|ref|YP_001310735.1| 60 kDa inner membrane insertion protein [Clostridium beijerinckii NCIMB 8052] gi|149904946|gb|ABR35779.1| 60 kDa inner membrane insertion protein [Clostridium beijerinckii NCIMB 8052] Length = 214 Score = 60.4 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 15/213 (7%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 I+ + + ++YF+N+ G+ GIAI+L T+ VKL+ P++ KQ +S + + ++E Sbjct: 1 MNIISNLLNVSLNYFFNITGDLGIAIILLTILVKLILMPISFKQKLSMYSQQEFSKGLEE 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 ++EK+K + ++ + Q Y N + G LLQIP+ F +Y+VI Sbjct: 61 IKEKYKSNKEKLEIET--QKYFKQNARGMIGILSSLLQIPIVFNLYRVILNMPMQVGTAL 118 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 W+ L +D I + P I P I L + Q K+S Sbjct: 119 IPWVVSLKMSDSLFIVPAIYAVSMLSP-----NILPYIPFLRLKAQAKLSKTNIIITT-- 171 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 ++ P L IY+ +++ S V Sbjct: 172 ------IISGLVTFKAPIALGIYFITTSLFSFV 198 >gi|157822095|ref|NP_001099470.1| mitochondrial inner membrane protein COX18 [Rattus norvegicus] gi|149033748|gb|EDL88544.1| similar to hypothetical protein FLJ38991 (predicted), isoform CRA_b [Rattus norvegicus] Length = 331 Score = 60.4 bits (144), Expect = 8e-07, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 70/183 (38%), Gaps = 21/183 (11%) Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + + + + + + +++ + +LY N +P + +Q+P++ Sbjct: 122 RLNQEVAVCARQFGWSKRVARLTYLKNIRRLVSELYVRDNCHPFKATVLVWVQLPMWV-- 179 Query: 444 YKVISISLEMRHAPFWGWIKD-LAAADPTNIFTLFGILPFYLPGFMHVGIWPI------I 496 IS+ +R+ D ++ D L I P+ + Sbjct: 180 ----FISVALRNLSTGATHSDGISVQDQLAAGGTLWFP--DLTAVDSTWILPVSVGVVNL 233 Query: 497 MSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + + +F K+ + Q + N++ V+ V ++ P+ L++YW S+++ + Q Sbjct: 234 LIVEIFALQKI---GKSRFQMYVTNFVRAVSVLMVPVAATVPSALVLYWLCSSLMGLSQN 290 Query: 554 AVI 556 ++ Sbjct: 291 LLL 293 >gi|218248781|ref|YP_002374152.1| putative inner membrane protein translocase component YidC [Cyanothece sp. PCC 8801] gi|257061840|ref|YP_003139728.1| inner membrane protein translocase component YidC [Cyanothece sp. PCC 8802] gi|218169259|gb|ACK67996.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 8801] gi|256592006|gb|ACV02893.1| 60 kDa inner membrane insertion protein [Cyanothece sp. PCC 8802] Length = 379 Score = 60.4 bits (144), Expect = 8e-07, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 44/109 (40%), Gaps = 10/109 (9%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA---DKGQAMILNWMPVVFVFALSSF 534 G++ + + LS+++ ++S + Q + PV+F F Sbjct: 257 GVVDDDGSINWDILGMILFFGLSIYLNQELSGASGGGSAQQQQAVNKITPVIFSGMFLFF 316 Query: 535 P--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 P AG+++Y +NV +Q ++M+ L + L+ + ++ Sbjct: 317 PLPAGVLMYIVVANVFQTLQTVILMR-----EPLPENLQKLVEQQEKAE 360 Score = 58.5 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ Q + MK Q Sbjct: 1 MDFGVGFISTNIMLPILDFFYGIVPSYGFAIIALTLVIRFGLYPLSAGQIRNMRKMKITQ 60 Query: 394 PKIDELREKFKQS--PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + E +E+ ++ Q+ + NPLAGC P+LLQ+P+ FA++ + S Sbjct: 61 PLMKERQEEIQRRYKDDPAKQQEEMGKLMQEFGNPLAGCLPLLLQMPILFALFATLRGS 119 >gi|119510151|ref|ZP_01629290.1| putative inner membrane protein translocase component YidC [Nodularia spumigena CCY9414] gi|119465212|gb|EAW46110.1| putative inner membrane protein translocase component YidC [Nodularia spumigena CCY9414] Length = 380 Score = 60.4 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 38/109 (34%), Gaps = 7/109 (6%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVFVFALSSF 534 G + + +S+++ + + + Q + PV+F F Sbjct: 257 GAQNPDGQINWDIVSMILFFGVSLYVSQMISGQNSSGGNPQQDTVNKITPVIFSGMFLFF 316 Query: 535 P--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 P AG+++Y N+ Q ++ + + + +T K ++ Sbjct: 317 PLPAGVLMYMVIGNIFQTAQTYILSR--EPLPEGLQEIVATQEKETAAE 363 Score = 53.1 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL+ + M+ +Q Sbjct: 1 MDFGIGFLSNNVMLPIIDFFYGIVPSYGLAIVALTLIIRFALYPLSAGSIRNMRKMRIVQ 60 Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + + K K Q+ + + NPLAGC P++LQ+PV A++ + S Sbjct: 61 PLMQKRMAEIKEKYKDNPQKQQEEMVNVQKEFGNPLAGCLPLVLQMPVLLALFATLRGS 119 >gi|221136502|ref|XP_002171142.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 131 Score = 60.0 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 11/120 (9%) Query: 368 TVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-------VLQKAMIQLYK 420 TV + L FPL K +TA + ++P++++L+EK +++ + +K Sbjct: 1 TVAFRALVFPLMIKGQANTARLAAVKPELEKLQEKLREAANYHNPNIRAQASIELQDFFK 60 Query: 421 THNINPLAGCWPILLQIPVFFAIY----KVISISLEMRHAPFWGWIKDLAAADPTNIFTL 476 HN NPL L+Q+P+F + + K+ ++ +E W DL+AADP IF + Sbjct: 61 KHNCNPLKSIISPLVQLPLFISFFIAIRKMCNLPVESLQTGGILWFSDLSAADPYMIFPI 120 >gi|33861742|ref|NP_893303.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|38502915|sp|Q7V0R8|OXAA_PROMP RecName: Full=Inner membrane protein oxaA gi|33640110|emb|CAE19645.1| Putative inner membrane protein; similar to 60 kDa inner membrane protein family [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 379 Score = 60.0 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII--MSLSMFIQMKMSP--PPADKGQA 517 I LAA G + FY+ G ++ I ++ L++ + +S P++ Q+ Sbjct: 236 IPGLAAKSGFLFIKALGQVGFYVDGSINWDIATLVGAFGLTLLLSQVLSSQGMPSNAQQS 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 PV+ FP AG+++Y +N+ Q ++ K Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNK 338 Score = 50.0 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 4/114 (3%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL 399 + K + ++ +FY LV ++G+AI+ TV +++ FPL+ S MK QP + + Sbjct: 4 FISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKR 63 Query: 400 REKFKQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + K P+ Q+ + +L +PLAGC P+++Q+PV FA++ + S Sbjct: 64 QAEIKSKFSSDPKKQQEELGKLMNEFG-SPLAGCLPLIVQMPVLFALFATLRGS 116 >gi|254416206|ref|ZP_05029960.1| 60Kd inner membrane protein [Microcoleus chthonoplastes PCC 7420] gi|196176888|gb|EDX71898.1| 60Kd inner membrane protein [Microcoleus chthonoplastes PCC 7420] Length = 334 Score = 60.0 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 43/109 (39%), Gaps = 10/109 (9%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKM---SPPPADKGQAMILNWMPVVF--VFALS 532 G + + + +S+++ + + P Q + PV+F +F Sbjct: 202 GAFGDDGEIHLDIVGMILFFGVSLYVNQVLTGQNAPSGSSQQNTVNKITPVLFSGMFFFF 261 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 PAG+++Y +NV +Q ++M+ L D ++ + ++ Sbjct: 262 PLPAGVLMYMVIANVFQTLQSFILMR-----EPLPDNIQKMVDEQEKAE 305 Score = 39.2 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Query: 389 MKNIQPKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 M+ QP + + +E + + +V Q+ + NPLAGC+P+LLQ+PV FA++ Sbjct: 1 MRITQPLMKKRQEEIQQRYGDDKVKQQEEMSKLFQEFGNPLAGCFPVLLQMPVLFALFAT 60 Query: 447 ISIS 450 + S Sbjct: 61 LRGS 64 >gi|291299759|ref|YP_003511037.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis DSM 44728] gi|290568979|gb|ADD41944.1| 60 kDa inner membrane insertion protein [Stackebrandtia nassauensis DSM 44728] Length = 235 Score = 60.0 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 15/199 (7%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ V+LL PL++ + + PK+ EL+ + Q L A +LY+T Sbjct: 28 IVVFTIAVRLLLHPLSRAAVRGEKTRQRLAPKMAELKRRHGD-DRQRLVDATGELYRTEG 86 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADP-----TNIFTLFG 478 PL GC P+LLQ+PVFF +Y+ + + + A + D A P + FG Sbjct: 87 STPLTGCLPMLLQLPVFFVMYR-LFTTDSISGAANPL-LDDTLAGTPLGQHLSETLAAFG 144 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMK----MSPPPADKGQAMILNWMPVVFV---FAL 531 + F + + ++L + + + SP P + A + MP++ Sbjct: 145 LASVQTLVFGVLLVALAAVALWTYRRTRRGMADSPNPPEGPAAAVARVMPLLSFGTLIVA 204 Query: 532 SSFPAGLIIYWSWSNVISI 550 + P IY + ++ Sbjct: 205 AIVPLAAGIYLLATTTWTV 223 >gi|47459465|ref|YP_016327.1| putative inner membrane protein translocase component YidC [Mycoplasma mobile 163K] gi|47458795|gb|AAT28116.1| putative preprotein translocase subunit [Mycoplasma mobile 163K] Length = 656 Score = 60.0 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 78/211 (36%), Gaps = 15/211 (7%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ----- 412 AI V++ F + K + M+ + PK ++ K+ Sbjct: 432 FGIIAAIFFVVFLVRIFSFLVTSKSVFAQVKMQELNPKKAKIDAKYAAFKGNKEMERRKA 491 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTN 472 + + QLYK +N+ + IL+ +P+FFA++K+I ++ F G + Sbjct: 492 QEVQQLYKKNNVKLSSQFTSILVSMPIFFAMFKIIQGIPSIKVTTFLGVTYSATSWQELL 551 Query: 473 IFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA-------MILNWMPV 525 F LP + F+ I + F+ + + + + N + Sbjct: 552 FNANFAYLPILIVVFVVQLISQF---VPRFLTKRRTKERTNVLEREALRKANRTQNIVSF 608 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 VF F AG+ IYW + +I+Q + Sbjct: 609 VFAFFGLVLTAGVQIYWIAGGIFTILQSVFV 639 >gi|236585|gb|AAB19981.1| protein involved in thiophene and furan oxidation [Escherichia coli] Length = 439 Score = 60.0 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 63/176 (35%), Gaps = 12/176 (6%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAI------MLTTVFVKLLFFPLAKKQY 383 + + + L+ + AI ++ T ++ L Sbjct: 136 LWSMAPQQTPWIRQRSGRNLLPVCQRNCRSPWCAIKPMDPQLVVTGSHIIITLCLLHHVP 195 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN-----PLAGCWPILLQIP 438 + E + + Q + PL GC+P+L+Q+P Sbjct: 196 ADQRPVHLHGEDAYVAAEDSGNARASGRSQTAYQPGNDGAVQSCEGQPLGGCFPLLIQMP 255 Query: 439 VFFAIYKVISISLEMRHAPFWGWIK-DLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 +F A+Y ++ S+E+R APF WI+ A + + TL G+ + G +++ + Sbjct: 256 IFLALYYMLMGSVELRQAPFALWIQVKFAGVEHVGVHTLIGLFRYRNRGGVYISVL 311 >gi|16330836|ref|NP_441564.1| inner membrane protein translocase component YidC [Synechocystis sp. PCC 6803] gi|38502896|sp|P74155|OXAA_SYNY3 RecName: Full=Inner membrane protein oxaA gi|1653329|dbj|BAA18244.1| inner membrane protein [Synechocystis sp. PCC 6803] Length = 384 Score = 59.6 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 2/119 (1%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +F+ +V ++G AI+ T+ ++L +PL+ Q + M+ Q Sbjct: 1 MDFGIGFISTNIMLPILDFFFGIVHSYGFAIIALTLVIRLGLYPLSAGQIRNMRKMRITQ 60 Query: 394 PKIDELREKFKQS--PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + E +E+ ++ Q+ + NPLAGC P+LLQ+P+ FA++ + S Sbjct: 61 PLMKERQEEIQKRYKDDPAKQQEEMAKVMKEFGNPLAGCLPLLLQMPILFALFATLRGS 119 Score = 47.3 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 40/100 (40%), Gaps = 14/100 (14%) Query: 490 VGIWPIIMSLSMFIQMKMS-------PPPADKGQAMILNWMPVVFVFALSSFP--AGLII 540 + + S+++ ++S P + Q I P++F FP AG+++ Sbjct: 269 ILGMIVFFGFSIYLNQELSGASGGGAPNAQAQQQQTINKITPILFSGMFLFFPLPAGVLM 328 Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 Y +NV +Q ++M+ L + L+ + + Sbjct: 329 YIVMANVFQTIQTLILMR-----EPLPENLQKLLDEQQKA 363 >gi|110741684|dbj|BAE98788.1| hypothetical protein [Arabidopsis thaliana] Length = 302 Score = 59.6 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 15/179 (8%) Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++ ++G AI+L TV VK FPL KKQ S MK++ P+I ++E++ ++ Sbjct: 117 TVHVPYSYGFAIILLTVLVKAATFPLTKKQVESAMAMKSLTPQIKAIQERYAGDQEKIQL 176 Query: 413 KAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFWGWIKDLAAADP- 470 +LYK INPLAGC P L IPV+ +Y+ +S + E + WI LA Sbjct: 177 -ETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTV 235 Query: 471 ------TNIFTLF----GILPFYLPGFMHVGIWPIIMSLSMF--IQMKMSPPPADKGQA 517 + I LF G P P + + P+++ S + IQ+ S D Sbjct: 236 AARQNGSGISWLFPFIEGHPPLGWPDTLAYLVLPLLLVFSQYLSIQIMQSSQSNDPAMK 294 >gi|50555926|ref|XP_505371.1| YALI0F13387p [Yarrowia lipolytica] gi|49651241|emb|CAG78178.1| YALI0F13387p [Yarrowia lipolytica] Length = 314 Score = 59.6 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 22/173 (12%), Positives = 55/173 (31%), Gaps = 23/173 (13%) Query: 408 PQVLQKAMIQLYKTHNINPLAG-CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLA 466 + +K ++LYK H L+Q+P++ + + GW Sbjct: 117 MKERRKRRVKLYKEHGCEMWKSLFIGPLVQLPIWITMSLAVRA--------MCGWTVVKG 168 Query: 467 AADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--------- 517 ++ T + L H G+ P + + + ++++ + Sbjct: 169 IPVVKSMGTEGALWFPDLLMMDHSGVLPAAVGIITLLNVELTTKAQAQAMGTTGSEGPKL 228 Query: 518 -MILNWMP----VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIG 565 ++ + + P + +YW S+ S++Q ++ K Sbjct: 229 PKMMANFARVGAIALFSIAAQTPTAVCLYWISSSGFSLIQNVLLNKYMPLREE 281 >gi|307214233|gb|EFN89339.1| Mitochondrial inner membrane protein COX18 [Harpegnathos saltator] Length = 287 Score = 59.6 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 33/236 (13%), Positives = 76/236 (32%), Gaps = 32/236 (13%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA--------------NMKNI 392 L+ + + I+LTTV ++ Sbjct: 12 DFLLWMHDYTGLPWWLVIVLTTVVMRATVTLPLSFYQQYIIAKLENLKLEMDEIVKEMKK 71 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQ-----LYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + + K+ + L ++ L N +P +L Q+P++ ++ Sbjct: 72 ETDYGVYKYKWSKEYATRLYTHSVKKQWNNLIIRENCHPAKASILVLAQLPLWISL---- 127 Query: 448 SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 S+ +R+ + +D +A F G L + P++M L +++ Sbjct: 128 --SMSIRNLCYMLPKQDASAYATYQEFITDGFLWVTNLTVADPFLLPVMMGLFNLAIIEI 185 Query: 508 SPPPADKGQAMILNWMPVVF-------VFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + K + +M F V P+ + +YW+ S+ ++Q ++ Sbjct: 186 THMNRIKETTKLTRYMIYFFRIVVIGMVPVAMYVPSCVSLYWATSSAFGLLQNLIL 241 >gi|195135595|ref|XP_002012218.1| GI16849 [Drosophila mojavensis] gi|193918482|gb|EDW17349.1| GI16849 [Drosophila mojavensis] Length = 322 Score = 59.6 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 35/256 (13%), Positives = 72/256 (28%), Gaps = 48/256 (18%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST--------- 386 +A L+ + AI+L+T + + Sbjct: 33 LSNSTPVAYIQDALIQIHDYSGLPWWSAIVLSTFLFRSVVTLPLTIYQHRITARIEGIAL 92 Query: 387 ---------ANMKNIQPKIDELREKFKQSPPQVLQKAM-IQLYKTHNINPLAGCWPILLQ 436 + + + +K + K +L N +P+ + Q Sbjct: 93 EMPAIVEELKREAAMAKQKFKWSDKQTAVVYRRSIKKQWQKLIIRDNCHPMKTIIVLWGQ 152 Query: 437 IPVFFAIYKVISISLEMRHAPF---------------WGWIKDLAAADPTNIFTLFGILP 481 IP++ + + M P +GWI +L D + I Sbjct: 153 IPLWICQSVALRNLVYMLPDPTSLKAQIAATELTIGGFGWIPNLTVVDGSYIL------- 205 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLII 540 P + + II +M + P + + V+ V + P+ L + Sbjct: 206 ---PVALGLINLAIIEVQTM---TRTRPQTRLQNIANNVFRGLSVLMVPIACTVPSALCV 259 Query: 541 YWSWSNVISIVQQAVI 556 YW S+ + Q ++ Sbjct: 260 YWVASSSFGLAQNLLL 275 >gi|194246772|ref|YP_002004411.1| probable preprotein translocase subunit YidC [Candidatus Phytoplasma mali] gi|193807129|emb|CAP18567.1| probable preprotein translocase subunit YidC [Candidatus Phytoplasma mali] Length = 572 Score = 59.6 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 77/474 (16%), Positives = 151/474 (31%), Gaps = 43/474 (9%) Query: 130 ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNN 189 + EL N+ + T + + ++ + I D Y F Sbjct: 104 TESQELLNNIKIEFEYKEDDKTASQSVFIIKIIDIQSKIQNIIKFDNEYNFNYFYFDL-- 161 Query: 190 SIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESN 249 Q F P + + + N + K +VE+KY S + Sbjct: 162 ---QKNFPPESKDFQKQQNKNANDVKDFFTVLMGTNYKYIVEEKYKKYFDISENKDFFLK 218 Query: 250 SWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPG--KSITTTNF 307 ++K + S+ + + K P + N Sbjct: 219 FSNSNNNKKFESLLSQELFNNEKKEINSHDLSIYNQIIKQVVAGNNNPPHLIAKLKFNND 278 Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGW---FYFIAKPMFMLMSYFYNLVGNFGIAI 364 ++ F Y + + G+ + + + + F + GN G I Sbjct: 279 IYFDFPIFVNNSGYLPIQWPSKLDWSGKLGFYYIWNVLIISIGFFLYIFSYIFGNLGFGI 338 Query: 365 MLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQKAMIQLYK 420 +LTT+ V+ L +P+ K T NM +QP+ID++R+K+ Q +Q +++YK Sbjct: 339 ILTTILVRTLSWPIYTKTSTFTLNMSLVQPEIDKIRDKYILKKDPVSIQKMQLETLRVYK 398 Query: 421 THNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD-LAAADPTNIFTLFGI 479 +NI G + LQIP+F ++ ++ R + + P F Sbjct: 399 KYNIG-FLGMFTTFLQIPIFISMLTTLNR---FRIPGGIFNLDNKFLDKTPFLGFIKLSA 454 Query: 480 LPFYLPGFMHVGIWPII---MSLSMFIQMKMSPPPADKGQAM------------------ 518 + I ++ + ++M I K+S Q Sbjct: 455 STTNDNDIRDILIKILLSTFVGITMIILNKISFKKPFYLQNKSYTVLNIEEKAKREQTEK 514 Query: 519 ---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 I+++ V + + L +YW N +I Q + + L+ + Sbjct: 515 SFKIVSYFMVAIMVFAAFNDNVLSLYWLVGNTYTIFQTVFNRQQMEKKYYLLKQ 568 >gi|18204899|gb|AAH21612.1| Cox18 protein [Mus musculus] Length = 200 Score = 59.6 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 66/166 (39%), Gaps = 37/166 (22%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH------------- 455 + +++ + +LY N +P + +Q+P++ IS+ +R+ Sbjct: 16 KNMRRLVSELYVRDNCHPFKATVLVWVQLPMWV------FISVALRNLSTGATHSDGISV 69 Query: 456 -----APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 A W DL A D T I + + + V I+ + + QM ++ Sbjct: 70 QEQLAAGGTLWFPDLTAVDSTWILP----VSVGVVNLLIVEIFALQKIGTSRFQMHVT-- 123 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + + V+ + ++ P+ L++YW S+++ + Q ++ Sbjct: 124 -------NFVRAVSVLMIPVAATVPSALVLYWLCSSLMGLAQNLLL 162 >gi|221124708|ref|XP_002158284.1| PREDICTED: similar to mitochondrial COX18 [Hydra magnipapillata] Length = 298 Score = 59.6 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 93/274 (33%), Gaps = 53/274 (19%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGN--FGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 E+ ++ F + + N + I ++TV ++ + + A Sbjct: 21 HEIKRFSSYYTFPLFTGTQQLLEASHFYSNLPWWTTIAISTVLLRCITTVPMGIKQNRIA 80 Query: 388 NMKNI------------------QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 + + + +++ +Q + + K ++YK ++I+ + Sbjct: 81 AKMELLQPQLKNLGDSVRSSLFSKNLNEADKKRMQQDFRKEIAKRTSEIYKKNDISLMQF 140 Query: 430 CWPILLQIPVFFAIYKVISI---------SLEMRHAPF-------WGWIKDLAAADPTNI 473 +Q+P + + + ++++ + P W +DL+ DP I Sbjct: 141 IMLPWIQMPTWITLSLALRNISGCRLQNETIDVIYMPSEGITTEGLLWFQDLSVPDPFYI 200 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS 533 +PF + I M F + P IL + V+ F S Sbjct: 201 ------IPFIILFVNIANIEINTMRAQGFW-KYLKP---------ILRLVAVLTAFISSQ 244 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLI 567 P+ + YW S++ ++Q VI+K+ L Sbjct: 245 VPSAMSFYWCTSSICGLMQN-VILKIPSVRRKLD 277 >gi|194865708|ref|XP_001971564.1| GG14371 [Drosophila erecta] gi|190653347|gb|EDV50590.1| GG14371 [Drosophila erecta] Length = 351 Score = 59.2 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 73/240 (30%), Gaps = 34/240 (14%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 G ++ + + + + +T ++ A + Sbjct: 81 YSGLPWWASIVLSTFLLRSVVTLPLTIYQHKITARIEQIALEMPA--IVEELKKEAAMAK 138 Query: 395 KIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + + E+ + K Q L N +P+ + QIP++ S+ + Sbjct: 139 RKFKWSEQQTLIVYRRSIKKQWQNLIVRDNCHPMKTMIVLWGQIPLWI------FQSVAL 192 Query: 454 RHAPFWGWIKDLAAADPTNI----------FTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 R+ + DPT+I FG +P L H I P+ + L Sbjct: 193 RNLVYML-------PDPTSIQAQIVTTEMTIGGFGWIP-NLTVVDHSYILPVALGLINLA 244 Query: 504 Q---MKMSPPPADKGQAMI----LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 MS I + VV V + P+ L +YW S+ + Q +I Sbjct: 245 IIEVQAMSRTRPSTRLQNIANNVFRGLSVVMVPVACTVPSALCVYWVASSSFGLAQNLLI 304 >gi|73975219|ref|XP_539312.2| PREDICTED: similar to Probable inner membrane protein OXA1L2 isoform 2 [Canis familiaris] Length = 333 Score = 59.2 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 31/245 (12%), Positives = 74/245 (30%), Gaps = 51/245 (20%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 ML+ + I L TV ++ + + Sbjct: 68 EMLLGLHAAAGLPWWACIGLGTVALRGAVTLPLAAYQHYILAKVENLQPEIKNIARHLNQ 127 Query: 407 PP-------------------QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + +++ + +LY N +P + +Q P++ + + Sbjct: 128 EVAVRANQLKWSKRVARLTYLKNMRRLVSELYVRDNCHPFKATILVWIQFPMWIFMSVAL 187 Query: 448 SI------------SLEMRHAPF-WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 S++ + A W DL A D T I + + Sbjct: 188 RNFSTGAAHSEAGFSVQEQLATDGILWFPDLTALDSTWIL---------PISVGVINLLI 238 Query: 495 IIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIV 551 + +F K+ Q I ++ V+ + ++ P+ +++YW S+++ + Sbjct: 239 V----EIFALQKIGMSR---FQTYITYFVRAVSVLMIPVAATVPSSIVLYWLCSSLMGLS 291 Query: 552 QQAVI 556 Q ++ Sbjct: 292 QNLLL 296 >gi|67902484|ref|XP_681498.1| hypothetical protein AN8229.2 [Aspergillus nidulans FGSC A4] gi|40739695|gb|EAA58885.1| hypothetical protein AN8229.2 [Aspergillus nidulans FGSC A4] Length = 484 Score = 58.8 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 87/238 (36%), Gaps = 38/238 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 + + + + ++ + + G + I+ T +F +L PL + ++A + N QP Sbjct: 100 LDYGWGPSAIVEFMIEHIHIYSGLPWVGSIIATGIFFRLAMAPLFWRAGDTSARLANAQP 159 Query: 395 KIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + ++EK + Q + M + I P P++ Q+P+ F ++VI Sbjct: 160 ILAPIKEKMLNAARSGNQVEAQKWRAEMAKTNANLGIVPRNTFMPLVFQLPIGFGCFRVI 219 Query: 448 SISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + A + WI D ADPT I PI+ + + Sbjct: 220 EGMAGLPVPGLAAEQFAWINDFTVADPTY-------------------ILPILCCTVLHL 260 Query: 504 QMKMSPPPADKGQ-------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 ++ ++ +P F ++ FPA L Y+ + + ++Q Sbjct: 261 SIRKGGETGSSMSGDMATIRKGMMYGIPAFSFFFVAFFPAALQAYFLTTGFLGLLQAY 318 >gi|124026366|ref|YP_001015482.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. NATL1A] gi|123961434|gb|ABM76217.1| Putative inner membrane protein [Prochlorococcus marinus str. NATL1A] Length = 382 Score = 58.8 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSP--PPADKGQA 517 I LAA G + FY+ G +H + I L++ I +S P +K Q+ Sbjct: 236 IPGLAAKSGFLFIKALGNVGFYVDGAIHWDIAILVAGFGLTLVISQVLSGRGMPVNKQQS 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 PV+ FP AG+++Y +N+ +Q ++ + Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVIANIFQGLQTFLLSR 338 Score = 50.8 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ T+ ++L FPL+ S MK QP + + + + Sbjct: 8 NLLIPILDFFYGLVPSYGLAIVALTIVIRLALFPLSAGSIRSARRMKIAQPVMQKRQAEI 67 Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 K PQ Q+ + +L +PLAGC P+++Q+P+ FA++ + S Sbjct: 68 KSRYASNPQKQQEELGKLMGEFG-SPLAGCLPLIVQMPILFALFATLRGS 116 >gi|259481011|tpe|CBF74158.1| TPA: mitochondrial export translocase Oxa1, putative (AFU_orthologue; AFUA_5G03640) [Aspergillus nidulans FGSC A4] Length = 491 Score = 58.8 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 87/238 (36%), Gaps = 38/238 (15%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 + + + + ++ + + G + I+ T +F +L PL + ++A + N QP Sbjct: 107 LDYGWGPSAIVEFMIEHIHIYSGLPWVGSIIATGIFFRLAMAPLFWRAGDTSARLANAQP 166 Query: 395 KIDELREKFKQS-------PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 + ++EK + Q + M + I P P++ Q+P+ F ++VI Sbjct: 167 ILAPIKEKMLNAARSGNQVEAQKWRAEMAKTNANLGIVPRNTFMPLVFQLPIGFGCFRVI 226 Query: 448 SISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + A + WI D ADPT I PI+ + + Sbjct: 227 EGMAGLPVPGLAAEQFAWINDFTVADPTY-------------------ILPILCCTVLHL 267 Query: 504 QMKMSPPPADKGQ-------AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 ++ ++ +P F ++ FPA L Y+ + + ++Q Sbjct: 268 SIRKGGETGSSMSGDMATIRKGMMYGIPAFSFFFVAFFPAALQAYFLTTGFLGLLQAY 325 >gi|156550973|ref|XP_001604208.1| PREDICTED: similar to cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Nasonia vitripennis] Length = 310 Score = 58.8 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 81/254 (31%), Gaps = 33/254 (12%) Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST---- 386 E + + L++ + +I L+ + + + + Sbjct: 28 EFAKSVADWKIVHLAQNTLLNMHDFTGLPWWASITLSALMARAVITLPFSLIQMHNTGKL 87 Query: 387 --------------ANMKNIQPKIDELREKFKQSPPQ-VLQKAMIQLYKTHNINPLAGCW 431 N NI EK + ++K L + N +P Sbjct: 88 QSIQPELEQSIKLLKNEANINVSYHGWPEKLARQHYTLAVKKEWSDLVQRENCHPAKSYI 147 Query: 432 PILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF-YLPGFMHV 490 +L+Q+P++F+ S+ R+ + D++A + G L H Sbjct: 148 LVLIQLPLWFSF------SIATRNLSYMLPHPDVSAQITYMEMVVGGFGWVKNLTDVDHF 201 Query: 491 GIWPI------IMSLSMFIQMKMS-PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 I P+ + L ++ P D+ + + ++ V V + PA IYW Sbjct: 202 LILPVTLGLLNLAVLETHNMFRVGEPTKFDRWRMNLFRFISVALVPIAAYMPAATNIYWI 261 Query: 544 WSNVISIVQQAVIM 557 S+ ++Q ++ Sbjct: 262 TSSSYGLMQAFLLN 275 >gi|295836812|ref|ZP_06823745.1| preprotein translocase YidC subunit [Streptomyces sp. SPB74] gi|295826217|gb|EDY44441.2| preprotein translocase YidC subunit [Streptomyces sp. SPB74] Length = 291 Score = 58.5 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 21/212 (9%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T V+LL PLA+ + P+I LR + P+ L++A+++L+ H Sbjct: 41 IVVLTACVRLLLLPLARTAARGQRERARLAPEIAALR-RTYAKDPERLRRALVELHTRHG 99 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA---DPTNIFTLFGIL 480 ++PL G P+L Q+P FF +Y V S S + P L AA D + G L Sbjct: 100 VSPLGGVLPMLCQLPFFFVLYHVFSSS-RIGGEPNGLLSHRLLAAPLGDRWSDALAHGGL 158 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMS--------PPPADKG---QAMILNWMPVV--F 527 F G +++ ++ ++ ++ + + + P P A + MP F Sbjct: 159 -FGARGLVYLALFALVAVVAT-LSSRRNRRQLAGSGPAPEGPQVPGAAALTRLMPYAAYF 216 Query: 528 VFALSS-FPAGLIIYWSWSNVISIVQQAVIMK 558 + P +Y + S S V++AV+ + Sbjct: 217 TLISVAVVPLAGALYLATSTTWSAVERAVLYR 248 >gi|209527903|ref|ZP_03276391.1| 60 kDa inner membrane insertion protein [Arthrospira maxima CS-328] gi|209491658|gb|EDZ92025.1| 60 kDa inner membrane insertion protein [Arthrospira maxima CS-328] Length = 391 Score = 58.5 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 7/106 (6%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DKGQAMILNWMPVVFV--FAL 531 G + + +S++I +S + Q + PV+F F Sbjct: 257 GAFDDDGNIHWDIVGMILGFGISLYINQVLSGQNQGSSGNPQQDTVNKITPVLFTGMFFF 316 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 PAG+++Y +N+ Q A I+ L + + + Sbjct: 317 FPLPAGVLLYMLIANIFQTGQ-AFILSREPLPENLQKIVEESERQT 361 Score = 53.1 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 65/120 (54%), Gaps = 4/120 (3%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL---AKKQYVSTANMK 390 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + + + Sbjct: 1 MDFGIGFLSNNLMLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSIRNMRRMKVTQ 60 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + + +K + P ++ M ++YK NPLAGC+P+LLQ+P+ FA++ + S Sbjct: 61 PLMKERVDKIQKLYKDDPVKQREEMSRVYKELG-NPLAGCFPLLLQMPILFALFATLRGS 119 >gi|148673383|gb|EDL05330.1| COX18 cytochrome c oxidase assembly homolog (S. cerevisiae), isoform CRA_b [Mus musculus] Length = 183 Score = 58.5 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 43/163 (26%) Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH------------------A 456 + +LY N +P + +Q+P++ IS+ +R+ A Sbjct: 5 ISELYVRDNCHPFKATVLVWVQLPMWV------FISVALRNLSTGATHSDGISVQEQLAA 58 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 W DL A D T I V + + +F K+ + Q Sbjct: 59 GGTLWFPDLTAVDSTWIL---------PVSVGVVNLLIV----EIFALQKI---GTSRFQ 102 Query: 517 AMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + N++ V+ + ++ P+ L++YW S+++ + Q ++ Sbjct: 103 MYVTNFVRAVSVLMIPVAATVPSALVLYWLCSSLMGLAQNLLL 145 >gi|219111049|ref|XP_002177276.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411811|gb|EEC51739.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 664 Score = 58.5 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 79/265 (29%), Gaps = 57/265 (21%) Query: 316 PTIHHYEKDLAIPRFEMLIDWG--WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + + I Y+ +M A T + Sbjct: 224 EVLQNVSVWGGSGYLLKAIHADGVVPYWACFAAINVMVRIGLFPLVLYGAQTSTRFAKVV 283 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 + + + ++ K LRE+ + + +YK H I+P+A Sbjct: 284 PEVQFLLSLFQADW--QRLRQKNAPLRERLM--LMRTNLGTLGGIYKLHGIHPMAVFLSP 339 Query: 434 LLQIPVFFAIYKVISISLEMRH--------------APFWGWIKDLAAADPTNIFTLFGI 479 LLQ+P+F+ +S+++R W+ DL ADP FG Sbjct: 340 LLQVPLFW------YVSVDLRKIVNGLDPVLAQQLVESSVAWVPDLTEADP-----WFG- 387 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQ-------MKMSPPPADKGQ-----AMILNWMPVVF 527 P++ L M+ +S P K + + V Sbjct: 388 -------------LPVLAGLVMYANVEVAIGRRSLSGPSVAKADTGVLLKDVFQSLAVFM 434 Query: 528 VFALSSFPAGLIIYWSWSNVISIVQ 552 S PAG+ IY S + ++ Q Sbjct: 435 PCFTSQMPAGVQIYLVTSFLFTMGQ 459 >gi|72382644|ref|YP_291999.1| putative inner membrane protein translocase component YidC [Prochlorococcus marinus str. NATL2A] gi|72002494|gb|AAZ58296.1| preprotein translocase subunit YidC [Prochlorococcus marinus str. NATL2A] Length = 382 Score = 58.5 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQMKMSP--PPADKGQA 517 I LAA G + FY+ G +H + I L++ I +S P +K Q+ Sbjct: 236 IPGLAAKSGFLFIKALGNVGFYVDGSIHWDIAILVAGFGLTLVISQVLSGRGMPVNKQQS 295 Query: 518 MILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMK 558 PV+ FP AG+++Y +N+ +Q ++ + Sbjct: 296 TANKITPVMITGMFLFFPLPAGVLLYMVIANIFQGLQTFLLSR 338 Score = 51.1 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + ++ +FY LV ++G+AI+ T+ ++L FPL+ S MK QP + + + + Sbjct: 8 NLLIPILDFFYGLVPSYGLAIVALTIVIRLALFPLSAGSIRSARRMKIAQPVMQKRQAEI 67 Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 K PQ Q+ + +L +PLAGC P+++Q+P+ FA++ + S Sbjct: 68 KSRYASNPQKQQEELGKLMGEFG-SPLAGCLPLIVQMPILFALFATLRGS 116 >gi|318057143|ref|ZP_07975866.1| hypothetical protein SSA3_04345 [Streptomyces sp. SA3_actG] gi|318080025|ref|ZP_07987357.1| hypothetical protein SSA3_25903 [Streptomyces sp. SA3_actF] Length = 281 Score = 58.5 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 20/213 (9%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T V+LL PL++ + P+I LR K+ ++P +Q+A+ +L+ H Sbjct: 41 IVVLTACVRLLLLPLSRTAARGQRERAGLAPEIAALRRKYAKNPE-RMQRALTELHAEHG 99 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFT--LFGILP 481 ++PL GC P+L Q+P FF +Y V S S + P L AA + L P Sbjct: 100 VSPLGGCLPMLCQLPFFFVLYHVFSSS-RIGGEPNRLLPHRLFAAPLGGHWGDALAHGGP 158 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMK--------MSPPPADKGQA-----MILNWMPVV-- 526 F G ++V ++ ++ +++ F + +P A GQ + +MP + Sbjct: 159 FGERGLVYVALFALVAAVATFTVRRNKRQLAGADTPLAAAGGQQVPGVGALTRFMPYMAY 218 Query: 527 FVFALSS-FPAGLIIYWSWSNVISIVQQAVIMK 558 F + P +Y S S V++AV+ + Sbjct: 219 FTLISVAVVPLAGALYIVTSTTWSAVERAVLYR 251 >gi|284052519|ref|ZP_06382729.1| putative inner membrane protein translocase component YidC [Arthrospira platensis str. Paraca] gi|291572001|dbj|BAI94273.1| putative inner membrane protein [Arthrospira platensis NIES-39] Length = 390 Score = 58.5 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 7/102 (6%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA----DKGQAMILNWMPVVFV--FAL 531 G + + +S++I +S + Q + PV+F F Sbjct: 257 GAFDDDGNIHWDIVGMILGFGISLYINQVLSGQNQAGSGNPQQDTVNKITPVLFTGMFFF 316 Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 PAG+++Y +N+ Q A I+ L + + Sbjct: 317 FPLPAGVLLYMLIANIFQTGQ-AFILSREPLPENLQKIVEES 357 Score = 53.5 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 65/120 (54%), Gaps = 4/120 (3%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL---AKKQYVSTANMK 390 +D+G + M ++ +FY +V ++G+AI+ T+ ++ +PL + + + Sbjct: 1 MDFGIGFLSNNLMLPILDFFYGIVPSYGLAIVALTLVIRFALYPLNAGSIRNMRRMKVTQ 60 Query: 391 NIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + + +K + P ++ M ++YK NPLAGC+P+LLQ+P+ FA++ + S Sbjct: 61 PLMKERVDKIQKLYKDDPVKQREEMSRVYKELG-NPLAGCFPLLLQMPILFALFATLRGS 119 >gi|238566367|ref|XP_002386052.1| hypothetical protein MPER_15880 [Moniliophthora perniciosa FA553] gi|215436820|gb|EEB86982.1| hypothetical protein MPER_15880 [Moniliophthora perniciosa FA553] Length = 202 Score = 58.5 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 18/164 (10%) Query: 339 FYFIAKPMFMLMSYFYNL--VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + A +++ + L V +G I+LT + ++ FP A + + + +QP+I Sbjct: 39 NWNPAGLYRWVLAQIHFLNPVLPWGYTIILTALLFRVATFPFAVRSIRFASRVTPLQPRI 98 Query: 397 DELREKFKQSPPQVLQ-------KAMIQLYKTHNINPLAGCWPILLQIPV----FFAIYK 445 +EL E+ ++ + + Q++K ++PL G L+QIPV FF I Sbjct: 99 NELNEQMREMAEKRDMVGLQRIRQEQFQVFKDAGVHPLGGAVSGLVQIPVAIGGFFGIKN 158 Query: 446 VISIS---LEMRHAPFWGW--IKDLAAADPTNIFTLFGILPFYL 484 +++ +++H + W I DLAA DPT + + + F Sbjct: 159 MLTEPTVVTQLQHNTGFEWMGITDLAATDPTGVLPVAFGVMFSG 202 >gi|284928889|ref|YP_003421411.1| YidC/Oxa1 family, membrane protein insertase [cyanobacterium UCYN-A] gi|284809348|gb|ADB95053.1| membrane protein insertase, YidC/Oxa1 family, C-terminal domain protein [cyanobacterium UCYN-A] Length = 378 Score = 58.5 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 2/119 (1%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G +I+ T+ ++L +PL+ Q + MK Q Sbjct: 1 MDFGIGFISTNIMLPILDFFYGIVPSYGFSIIALTLVIRLALYPLSAGQIRNMRKMKITQ 60 Query: 394 PKIDELREKFKQS--PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + E +E+ ++ Q+ + NPLAGC P++LQ+P+ FA++ + S Sbjct: 61 PLMKERQEEIQRRYKDDSAKQQEEMGKLMKEFGNPLAGCLPLVLQMPILFALFATLRGS 119 Score = 47.7 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 9/108 (8%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA--MILNWMPVVFVFALSSFP 535 G++ + + S+++ ++S Q I P++F FP Sbjct: 257 GVMGEDGNINWDILAMILFFGASIYVNQELSGSSGGGQQQQQAITKITPILFSGMFLFFP 316 Query: 536 --AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 AG+++Y +NV +Q ++M+ L D L+ + + Sbjct: 317 LPAGVLMYIVVANVFQTLQSLILMR-----EPLPDNLQKLVDEQKKEE 359 >gi|158336230|ref|YP_001517404.1| putative inner membrane protein translocase component YidC [Acaryochloris marina MBIC11017] gi|158306471|gb|ABW28088.1| inner membrane protein OxaA, putative [Acaryochloris marina MBIC11017] Length = 404 Score = 58.1 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Query: 519 ILNWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 + +MPV+F FP AG+++Y +N+ VQ + K L + K Sbjct: 313 MNKYMPVMFSGMFLFFPLPAGVLLYMLLANIFQTVQSYFLSK-EPLPENLQKIVDEQERK 371 Query: 577 NYNSQ 581 + Sbjct: 372 KAKEE 376 Score = 53.1 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 66/110 (60%), Gaps = 4/110 (3%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 M ++ +FY +V ++G+AI+ T+ ++ + +P++ Q + MK QP + + +++ Sbjct: 10 NIMLPILDFFYGIVPSYGLAIVALTLVIRSVLYPVSAGQIRNMRRMKVSQPVMQKRQKEL 69 Query: 404 KQS---PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 ++ P LQ+ +L+K NPLAGC+P+L+Q+P+ FA++ + S Sbjct: 70 QERYKDDPAKLQEEQTKLFKEFG-NPLAGCFPLLIQMPILFALFATLRGS 118 >gi|50365496|ref|YP_053921.1| putative inner membrane protein translocase component YidC [Mesoplasma florum L1] gi|50364052|gb|AAT76037.1| predicted inner membrane protein [Mesoplasma florum L1] Length = 418 Score = 58.1 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 81/211 (38%), Gaps = 16/211 (7%) Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVL 411 + AI+ T + +K + K V+ + Q K +++ K+K Q + Sbjct: 179 YGVSVIFAILFTVIIIKSISLAFTWKSQVNQHKQQAFQLKQADIQAKYKGDKSPQARQKM 238 Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA--PFWGWIKDLAAAD 469 M L K +P + +P FAIY ++ + ++ A I+ + Sbjct: 239 SAEMQALQKKEGFSPFSSMAGAFASMPFLFAIYAIVRSTKSLKIANVGMIALIEKPWSQM 298 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIM------SLSMFIQMKMSPPPADKGQAMILNWM 523 +L YLP + + P+++ S+++ + S Q + Sbjct: 299 LNGEVIYLSLLAVYLPLQIISMLLPLVLQSIKQKSITLTEAQRKSRKKQFIMQGVFAFV- 357 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 F+F ++S +G+ IYW +S+ I+Q Sbjct: 358 ---FIFVVASVASGVAIYWIFSSTFQIIQTL 385 >gi|213422210|ref|ZP_03355276.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 64 Score = 58.1 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 21/26 (80%) Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMK 558 FP+GL++Y+ SN+++I+QQ +I + Sbjct: 5 WFPSGLVLYYIVSNLVTIIQQQLIYR 30 >gi|294629545|ref|ZP_06708105.1| preprotein translocase YidC subunit [Streptomyces sp. e14] gi|292832878|gb|EFF91227.1| preprotein translocase YidC subunit [Streptomyces sp. e14] Length = 242 Score = 58.1 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 106/244 (43%), Gaps = 23/244 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 F F A+ + L + + AI+L T V+LL PL++ ++ Sbjct: 1 MSVFPFFARLVEQLAELLQPVFHASSAAAAIVLFTACVRLLVHPLSRAAVRGQKAQAALR 60 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 P+I ELREK ++P LQKA+++L+ ++PL+GC P LLQ+P FF +Y + S + Sbjct: 61 PRIAELREKHAKNPG-RLQKALVELHAEEKVSPLSGCLPNLLQLPAFFLLYH-LFSSTAI 118 Query: 454 RHAPFWGWIKDLAAADPTNIFT--LFGILPFYLPGFMHVGIWPIIMSLSMFIQMK----- 506 L AA ++ L F G ++VG++ ++ +++ F ++ Sbjct: 119 GGDGNGLLSHRLFAAPLGGRWSDALADGGVFGAAGIVYVGLFAVVAAVATFSFLRARRAA 178 Query: 507 ------------MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 P P + ++ + + ++ P +Y S + V++A Sbjct: 179 AGGDTGGAALGGGEPVPGLAAVGKVAPFLSLGTLVTVAVVPLAAALYVVTSTAWTAVERA 238 Query: 555 VIMK 558 ++ + Sbjct: 239 LLTR 242 >gi|167555045|ref|NP_001107941.1| mitochondrial inner membrane protein COX18 [Danio rerio] gi|160774039|gb|AAI55288.1| Zgc:174864 protein [Danio rerio] Length = 328 Score = 58.1 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 78/246 (31%), Gaps = 48/246 (19%) Query: 349 LMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST-------------ANMKNIQPK 395 L+S + +I+ TT+ ++ + Sbjct: 64 LLSVQQLTGLPWWSSIICTTLALRCSITLPLAIYQAHIIAKIEALQKEIAAFAQQLRFEI 123 Query: 396 IDELREK------FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +EK + + L++ + +LY N +P I +Q+P++ + + Sbjct: 124 SVRAKEKNWTEQTCRFHFKKNLRRIVSELYVRENCHPFKASVLIWVQLPMWVCVSLALRN 183 Query: 450 -SLEMRH--------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 SL + + A W DL D T I + + L + Sbjct: 184 LSLGLGNTDVSAGLAAGGALWFPDLTVPDSTWIMPVSLGIINLLITEIFA---------- 233 Query: 501 MFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + + K Q +++ V+ + ++ P+ + +YW S+ + + ++ Sbjct: 234 ------LRQTESSKMQKYATHFIRGISVLMIPIAATVPSSMCVYWLSSSCVGLAHNLLL- 286 Query: 558 KMHGAE 563 + G Sbjct: 287 RSPGVR 292 >gi|298707359|emb|CBJ30003.1| Oxa1-like homolog, mitochondrial inner membrane insertase [Ectocarpus siliculosus] Length = 260 Score = 58.1 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 71/219 (32%), Gaps = 32/219 (14%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + I + T+ VK+ P+ Q M+ P+I LR S ++ Q+ +++ + Sbjct: 22 WWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEEIPQERVLERW 81 Query: 420 KTHNI--------------NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDL 465 + + + + L+ +PVF I L P D Sbjct: 82 RKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGL----DT 137 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPV 525 AD + L I + + F Q D Q I+ +P Sbjct: 138 GEADTVHSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQ--------DGMQTFIILMLPW 189 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 V FP G+ +YW S V + Q MK + Sbjct: 190 VST-----FPQGVFMYWIPSAVFQMGQTY-TMKNNKVRE 222 >gi|331092108|ref|ZP_08340939.1| hypothetical protein HMPREF9477_01582 [Lachnospiraceae bacterium 2_1_46FAA] gi|330402309|gb|EGG81880.1| hypothetical protein HMPREF9477_01582 [Lachnospiraceae bacterium 2_1_46FAA] Length = 420 Score = 57.7 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 10/89 (11%) Query: 494 PIIMSLSMFIQMKMSPP---------PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 PI+ L+ +I +K++ P M+ MP++ VF +F AGL +YW Sbjct: 258 PILSGLTQWISIKLTSTASATQTADNPMASQMKMMNVMMPMLSVFMCFTFQAGLGLYWIA 317 Query: 545 SNVISIVQQAVIMKMHGAEIGLIDRLRST 573 S V+ VQQ +I K H +I + D + Sbjct: 318 SAVVRCVQQLIINK-HLEKISVDDLIAQN 345 Score = 40.7 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ----VLQKAMIQLYKTHNINPL 427 L PL KQ + + P+I +++K+K Q +Q+ +Y + +P Sbjct: 53 YTLLIPLTIKQQKFSKMSAAMNPEIQAIQKKYKGKRDQTSVLKMQEETQMVYDKYGTSPT 112 Query: 428 AGCWPILLQIPVFFAIYKVISI 449 GC +L+Q P+ +++VI Sbjct: 113 GGCGSLLIQFPILLGLWQVIQN 134 >gi|301790367|ref|XP_002930388.1| PREDICTED: mitochondrial inner membrane protein COX18-like [Ailuropoda melanoleuca] gi|281350691|gb|EFB26275.1| hypothetical protein PANDA_020824 [Ailuropoda melanoleuca] Length = 336 Score = 57.7 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 65/163 (39%), Gaps = 31/163 (19%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----------SLEMRHAP 457 + +++ + +LY N +P + +Q P++ + + S++ + A Sbjct: 153 KNMRRLVSELYVRDNCHPFKATVLVWIQFPMWIFMSVALRNFSTGATHSEGFSVQEQLAT 212 Query: 458 F-WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 W DL A D T I + +GI ++ + +F K+ Q Sbjct: 213 DGILWFPDLTALDSTWILP------------ISIGIVNLL-IVEIFALQKIGMSR---FQ 256 Query: 517 AMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 I ++ V+ + ++ P+ + +YW S+++ + Q ++ Sbjct: 257 TYITYFVRVVSVLMIPVAATVPSSIGLYWLCSSLMGLSQNLLL 299 >gi|306837145|ref|ZP_07470082.1| membrane protein OxaA [Corynebacterium accolens ATCC 49726] gi|304566993|gb|EFM42621.1| membrane protein OxaA [Corynebacterium accolens ATCC 49726] Length = 314 Score = 57.7 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 96/282 (34%), Gaps = 40/282 (14%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 F P+ +M +++ L+G+ + ++I+L + V+ + PL S Sbjct: 1 MFEVFMYPVSGIMKFWHWLIGSFVDEPTAWLVSIILLVITVRGIVSPLNWMALRSGRISV 60 Query: 391 NIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 ++P+ + E+ + L K++N P AGC P L+ IP F +Y+V Sbjct: 61 LMRPESTRINEQMNHAETTEEMAELIQKQQDLSKSYNYKPAAGCIPPLITIPAFLGLYQV 120 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL------- 499 I + + D T G+ + PI+ + Sbjct: 121 ILRMSNIEQGSSTVGMLDAGDVAAFRETTYSGVPITDFARDHGDLLNPIVFAAIAFTLAN 180 Query: 500 ----------SMFIQMKMSPPPADKGQAMILNWMPVVFVFA--LSSFPAGLIIYWSWSNV 547 + K++ ++ P++ + P +I+YW W+ + Sbjct: 181 SIISVVRSFLTTQFDQKVNRRIFIIIGILL-IVAPILLWYLAHSGPLPVAIILYWGWAYL 239 Query: 548 ISIVQQAV--IM--KMHGAEIGLIDRLRS-----TFSKNYNS 580 ++VQ V IM K + + + R + Sbjct: 240 FTLVQTIVFEIMLHKRYPLTEEVHEMRRESIRAWRQKNKKPA 281 >gi|221091348|ref|XP_002154153.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 230 Score = 57.7 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 72/184 (39%), Gaps = 33/184 (17%) Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI---------S 450 +++ +Q + + K ++YK ++I+ + +Q+P + + + + Sbjct: 40 KKRMQQDFRKEIAKRTSEIYKKNDISLMQFIMLPWIQVPTWITLSLALRNISGCRLQNET 99 Query: 451 LEMRHAPF-------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 +++ + P W +DL+ +DP I +PF + I M F Sbjct: 100 IDVIYMPSEGITTEGLLWFQDLSVSDPFYI------IPFIILFVNIANIEINTMRAQGFW 153 Query: 504 QMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 + P IL + V+ F S P+ + YW S++ ++Q VI+K+ Sbjct: 154 -KYLKP---------ILRLVAVLTAFISSQVPSAMSFYWCTSSICGLIQN-VILKIPSVR 202 Query: 564 IGLI 567 L Sbjct: 203 RKLD 206 >gi|333024766|ref|ZP_08452830.1| putative preprotein translocase YidC subunit [Streptomyces sp. Tu6071] gi|332744618|gb|EGJ75059.1| putative preprotein translocase YidC subunit [Streptomyces sp. Tu6071] Length = 281 Score = 57.7 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 22/214 (10%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T V+LL PL++ + P+I LR K+ ++P +Q+A+ +L+ H Sbjct: 41 IVVLTACVRLLLLPLSRTAARGQRERAGLAPEIAALRRKYAKNPE-RMQRALTELHAEHG 99 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA---DPTNIFTLFGIL 480 ++PL GC P+L Q+P FF +Y V S S + P L AA D G Sbjct: 100 VSPLGGCLPMLCQLPFFFVLYHVFSSS-RIGGEPNRLLPHRLFAAPLGDRWADALAHGG- 157 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMK--------MSPPPADKGQA-----MILNWMPVV- 526 PF G ++V ++ ++ +++ F + +P A GQ + +MP + Sbjct: 158 PFGERGLVYVALFALVAAVATFSVRRNKRQLAGADTPLAAAGGQQVPGVGALTRFMPYMA 217 Query: 527 -FVFALSS-FPAGLIIYWSWSNVISIVQQAVIMK 558 F + P +Y S S V++AV+ + Sbjct: 218 YFTLISVAVVPLAGALYIVTSTTWSAVERAVLYR 251 >gi|170595403|ref|XP_001902369.1| 60Kd inner membrane protein [Brugia malayi] gi|158590000|gb|EDP28784.1| 60Kd inner membrane protein [Brugia malayi] Length = 399 Score = 57.3 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 91/302 (30%), Gaps = 36/302 (11%) Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA--GAKEFPTIHHYEKDL 325 S K + + +P +++ ++ F F + + + Sbjct: 42 GVRHASTAKDIFVVSNDSLTGIPDIPVINMPPEAVASSGFSFYEKWLLKVDILDLFGLS- 100 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 I E + W+ + L + + +I+ TT+ ++L F Sbjct: 101 GISAVESTGLFSWYSPASWYRIALEFIHNHFDLPWFASIICTTLCLRLAFLRATLFLQRF 160 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYK--------THNINPLAGCWPILLQI 437 + +K K++ + +A+ + T+N+ + L Sbjct: 161 APMKMMHDDTLKMFDDKKKEAREVIRSEALYRKISHDENIYVDTYNLRSSNRYYYFALNS 220 Query: 438 PVFFAIYKVISISLEMRHAPF----WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 +F + Y+ I + E + W DL DP + Sbjct: 221 VLFISQYRGIILMAENNFPGWDTGGALWFLDLTTTDPNFLVPALSS-------------- 266 Query: 494 PIIMSLSMFIQMKMSPPPADKGQA--MILNWM--PVVFVFALSSFPAGLIIYWSWSNVIS 549 +++ ++F+ P ++ P+ F S P + IYW SN + Sbjct: 267 -VLIGCTLFL--GYDPTGTASANKYVKAFKYVAVPLGVFFFSSRVPVAVSIYWCASNFFN 323 Query: 550 IV 551 ++ Sbjct: 324 LL 325 >gi|328867927|gb|EGG16308.1| putative oxidase assembly protein [Dictyostelium fasciculatum] Length = 407 Score = 57.3 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 79/214 (36%), Gaps = 34/214 (15%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ-----VLQK 413 ++ + + + T+ ++ FP A KQ V+ A + I+P++DE + K++ + Sbjct: 151 SWLVIVPVYTLLLRSALFPFAIKQRVNVARIMEIRPQLDEFKRISKENRAKGISNYENSN 210 Query: 414 AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE----MRHAPFWGWIKDLAAAD 469 + L K +P L +P F + I E ++ A W DL+ D Sbjct: 211 KITALLKEKKCHPALSYIFPLANLPFFISTILAIRGMAETFPSLKDAG-MLWFTDLSIPD 269 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM----PV 525 T I P+ S+ ++S +D L+W + Sbjct: 270 STY-------------------ILPVTCSVLYLAINELSLAKSDSLILKTLSWFARALSI 310 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 + + P + YW S++ ++ Q + K Sbjct: 311 AIIPFSYTIPNLVYFYWIPSSLFTLGQ-LFVFKS 343 >gi|170043998|ref|XP_001849650.1| inner membrane protein COX18, mitochondrial [Culex quinquefasciatus] gi|167867261|gb|EDS30644.1| inner membrane protein COX18, mitochondrial [Culex quinquefasciatus] Length = 340 Score = 57.3 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 85/277 (30%), Gaps = 47/277 (16%) Query: 303 TTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI 362 T T+ ++ P + + + I F L W M L++ + N + Sbjct: 45 TVTSLWTTMSQSTPVAYVQQGLVNIHDFTGLPWWASVILSTVLMRSLVTLPLAIYQNKIV 104 Query: 363 -----AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ 417 + VK L A + + + +K + Sbjct: 105 ARLEKISLEMPEIVKGLKLETAYAIKKYNWTEQEARITYNRSLKKQWD-----------K 153 Query: 418 LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNI---- 473 L N +P + QIP++ + + M DP +I Sbjct: 154 LVIRENCHPAKTMIVLWGQIPLWVMMSVSFRNMVHM-------------LPDPGSIEAQI 200 Query: 474 ------FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP----ADKGQA---MIL 520 FG +P L H I P+ M L +++ + K Q + Sbjct: 201 TFTELTLGGFGWIP-NLTEVDHSLILPVAMGLINLAIIEIQNAARTRESSKLQRIFTNVF 259 Query: 521 NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + V+ V ++ P+ L +YW S+ + Q ++M Sbjct: 260 RGLSVLMVPIAATVPSCLSLYWVTSSAYGLCQNLMLM 296 >gi|167933014|ref|ZP_02520101.1| hypothetical protein cdivTM7_00209 [candidate division TM7 single-cell isolate TM7b] Length = 163 Score = 57.3 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 37/118 (31%), Gaps = 27/118 (22%) Query: 489 HVGIWPIIMSLSMFIQMKMSPPPAD-------------------------KGQAMILNWM 523 + I + +I K + P ++ +M Sbjct: 5 LLLALAIGAGIMQYISSKQTMPQKQTKKGLRQIMAEAAEGKEADSSEMNAAVMQKMVKFM 64 Query: 524 PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 P++ + + P + +Y +++VQQ ++K E L D + K S+ Sbjct: 65 PIMLTLIMVNLPGAIALYSCTFTAVAVVQQHFLLKK--DEDELQDMADKSTLKKRVSK 120 >gi|295666918|ref|XP_002794009.1| inner membrane protein OXA1 [Paracoccidioides brasiliensis Pb01] gi|226277662|gb|EEH33228.1| inner membrane protein OXA1 [Paracoccidioides brasiliensis Pb01] Length = 644 Score = 57.3 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 83/241 (34%), Gaps = 37/241 (15%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390 I + + ++ + ++ + G + + T V +++ A ++A + Sbjct: 278 KAIGLDYGWGPSRLIETILESLHIHGGLPWVGATITTAVLLRVAMLKFAIDASDTSAKVA 337 Query: 391 NIQPKIDELREKFKQS-PPQVLQKAMIQLYKTHNINP-----LAGCWPILLQIPVFFAIY 444 +++ ++E+ K+ L IN L ++QIP+ F + Sbjct: 338 SVKHLTQPIQEEVKRCYRENDTIGMQRALSTRRIINENYNIKLMKLAYPMIQIPLNFGAF 397 Query: 445 KVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +V+ + + + W+ + DP I P+ L Sbjct: 398 RVLRGMSALPVPGLDSESFLWLSSVTVHDPLF-------------------ILPVSTGLL 438 Query: 501 MFIQMKMS---PPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M K+ D+ +L +PV+ P L I+++ ++V++I+Q Sbjct: 439 MHYTFKLGGEVSASTDQTAMAARPLLLYGLPVLSTVCTLFLPGILQIFFASTSVLAILQS 498 Query: 554 A 554 Sbjct: 499 Y 499 >gi|316968526|gb|EFV52796.1| conserved hypothetical protein [Trichinella spiralis] Length = 296 Score = 57.3 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 23/202 (11%), Positives = 63/202 (31%), Gaps = 19/202 (9%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 Y + + ++++ ++ G A + + L + + Sbjct: 55 SYSPSGLVQLMLNSIHDNFGVPWWASIFLFMIYSQRNSALMSNFTEGLGKLNKNLIEARI 114 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISLEMR 454 R++F + + + ++ +K + ++Q +F A+ + + Sbjct: 115 RRDRFSEELAMLELQDYMKEHKAAQLY-GRMFAISMIQGSIFLTYFLALRGMSYAPVMSM 173 Query: 455 HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 + WI D+ DP I L + + + + +S K Sbjct: 174 TQSGFLWITDMTLPDPAWILPL-----YSSLSVLIILELGLETGVSTDSMSKF------- 221 Query: 515 GQAMILNWMPVVFVFALSSFPA 536 ++ MP+ F + +P+ Sbjct: 222 --KWVMRVMPIGMFFFIKDYPS 241 >gi|311262330|ref|XP_003129127.1| PREDICTED: mitochondrial inner membrane protein COX18-like [Sus scrofa] Length = 336 Score = 56.9 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 64/192 (33%), Gaps = 32/192 (16%) Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 ++ ++ + + ++K + +LY N +P + +Q+P+ Sbjct: 124 NISRHLNQEVAVRAHQLGWSKRAARLTYLKTMRKLVSELYVRDNCHPFKATVLVWIQLPM 183 Query: 440 FFAIYKVISISLEMRHAPF------------WGWIKDLAAADPTNIFTLFGILPFYLPGF 487 + + + + W DL A D T I Sbjct: 184 WIFMSVALRNLSTGKTQSEGLSVQEQLATGGVLWFSDLTAVDSTWIL---------PVSV 234 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM---PVVFVFALSSFPAGLIIYWSW 544 + + + +F K+ + Q + ++ V+ + ++ P+ +++YW Sbjct: 235 GVINLLIV----EIFALQKI---GTSRFQTYVTYFVRAVSVLMIPIAATVPSSIVLYWLC 287 Query: 545 SNVISIVQQAVI 556 S+ + + Q ++ Sbjct: 288 SSFVGLSQNLLL 299 >gi|195374958|ref|XP_002046270.1| GJ12599 [Drosophila virilis] gi|194153428|gb|EDW68612.1| GJ12599 [Drosophila virilis] Length = 349 Score = 56.9 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 71/245 (28%), Gaps = 34/245 (13%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 G ++ A + + + +T ++ A + Sbjct: 79 YSGLPWWAAIVLSTFLFRSVVTLPLTIYQHKITARIEQIALEMPA--IVEELKREAAMAK 136 Query: 395 KIDELREKFKQSPPQVLQKAMIQ-LYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 + + +K Q + K Q L N +P+ + QIP++ + + M Sbjct: 137 QKFKWSDKQTQIVYRRSIKKQWQNLIVRDNCHPMKTVIVLWGQIPLWIFQSVALRNLVYM 196 Query: 454 RHAPF---------------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 P GWI +L D + I P + + I+ Sbjct: 197 LPDPTTLKAQIIATELTIGGIGWIPNLTVVDSSYIL----------PVTLGLINLAIVEL 246 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI-- 556 +M P + V+ V + P+ L +YW S+ + Q ++ Sbjct: 247 QTM--TRTRPPTRLQNIANNCFRGLSVLMVPVACTVPSALCVYWVASSSFGLAQNLLLLS 304 Query: 557 --MKM 559 M+ Sbjct: 305 PEMRR 309 >gi|227501853|ref|ZP_03931902.1| possible inner membrane protein translocase component YidC [Corynebacterium accolens ATCC 49725] gi|227077347|gb|EEI15310.1| possible inner membrane protein translocase component YidC [Corynebacterium accolens ATCC 49725] Length = 314 Score = 56.9 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 100/272 (36%), Gaps = 35/272 (12%) Query: 338 WFYFIAKPMFMLMSYFYNLVGN-------FGIAIMLTTVFVKLLFFPLAKKQYVSTANMK 390 F P+ +M +++ L+G+ + ++I+L + V+ + PL S Sbjct: 1 MFEVFMYPVSGIMKFWHWLIGSFVDESTAWLVSIILLVITVRGIVSPLNWMALRSGRISV 60 Query: 391 NIQPKIDELREKFKQSPPQVLQKA----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 ++P+ + E+ + L K++N P AGC P L+ IP F +Y+V Sbjct: 61 LMRPESTRINEQMNHAETTEEMAELIQKQQDLSKSYNYKPAAGCIPPLITIPAFLGLYQV 120 Query: 447 ISISLEMRHAPFWGWI---KDLAAADPTNIFTLF----------GILPFYLPGFMHVGIW 493 I + + D+AA T + + P + Sbjct: 121 ILRMSNIEQGSSTVGMLDAADVAAFRETTYSGVPITDFARDHGDLLNPIVIAAIAFTLAN 180 Query: 494 PIIMSLSMFIQ----MKMSPPPADKGQAMILNWMPVVFVFA--LSSFPAGLIIYWSWSNV 547 II + F+ K++ ++ P++ + P +I+YW W+ + Sbjct: 181 SIISVVRSFLTTQFDQKVNRRIFIIIGILL-IVAPILLWYLAHSGPLPVAIILYWGWAYL 239 Query: 548 ISIVQQAV--IM--KMHGAEIGLIDRLRSTFS 575 ++VQ V IM K + + + R + Sbjct: 240 FTLVQTIVFEIMLHKRYPLTEEVHEMRRESIR 271 >gi|225683560|gb|EEH21844.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 505 Score = 56.9 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 83/241 (34%), Gaps = 37/241 (15%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMK 390 I + + ++ + ++ + G + + T V +++ A ++A + Sbjct: 148 KAIGLDYGWGPSRLIETILESLHIHGGLPWVGATITTAVLLRVAMLKFAIDASDTSAKVA 207 Query: 391 NIQPKIDELREKFKQS-PPQVLQKAMIQLYKTHNINP-----LAGCWPILLQIPVFFAIY 444 +++ ++E+ K+ L IN L ++QIP+ F + Sbjct: 208 SVKHLTQPIQEEVKRCYRENDTIGMQRALSARRIINENYNIKLMKLAYPMIQIPLNFGAF 267 Query: 445 KVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 +V+ + + + W+ + DP I P+ L Sbjct: 268 RVLRGMSALPVPGLDSESFLWLSSVTVHDPLF-------------------ILPVSTGLL 308 Query: 501 MFIQMKMS---PPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 M K+ D+ +L +PV+ P L I+++ ++V++I+Q Sbjct: 309 MHYTFKLGGEVSASTDQTAMAAKPLLLYGLPVLSTVCTLFLPGILQIFFASTSVLAILQS 368 Query: 554 A 554 Sbjct: 369 Y 369 >gi|66811452|ref|XP_639906.1| hypothetical protein DDB_G0284883 [Dictyostelium discoideum AX4] gi|60466861|gb|EAL64905.1| hypothetical protein DDB_G0284883 [Dictyostelium discoideum AX4] Length = 396 Score = 56.9 bits (135), Expect = 8e-06, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 84/229 (36%), Gaps = 31/229 (13%) Query: 345 PMFMLMSYFYNLVGNFGIAIM-LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 + + ++ ++L + I+ + T+F++ FPL+ K +++ + I+P++D+ +E+ Sbjct: 133 FIEVCLNQLHHLTSLPWLVIVPVFTLFIRSALFPLSIKHRINSMRLLEIRPQLDKFKEQQ 192 Query: 404 KQSPPQV--------LQKAMIQLYKTHNINPLAGCWPILLQIPVFF----AIYKVISISL 451 K + + + L K +P+ + +P A + + Sbjct: 193 KINRKNKASIQVRAQTSQKITTLLKEKGCHPVLSYILPMANLPFLISSIIAFRDMAANYP 252 Query: 452 EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI-IMSLSMFIQMKMSPP 510 ++ A W DL+ +DP + + + + + +M ++ Sbjct: 253 SLKDAG-MLWFTDLSQSDPIFVLPVICSSLYLIATELAFSKNTNPLMVALKWVS------ 305 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 M ++ + + P+ +YW S + +I Q Sbjct: 306 ----------RGMSLLLIAFSPTIPSICYLYWIPSGLFTIAQSLAFNSK 344 >gi|260948072|ref|XP_002618333.1| hypothetical protein CLUG_01792 [Clavispora lusitaniae ATCC 42720] gi|238848205|gb|EEQ37669.1| hypothetical protein CLUG_01792 [Clavispora lusitaniae ATCC 42720] Length = 337 Score = 56.9 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 66/207 (31%), Gaps = 19/207 (9%) Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 + P E+ + +K +L++ H + + QIP++ + Sbjct: 124 ASMVSPLRKMKYEEIMVLSTKETRKRQKKLFRDHGVQLYKNLFLPAAQIPLWVCMSLTFR 183 Query: 449 I---------------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 + H W DL +DP +IF L + + + Sbjct: 184 NLSGWSTWDSLANKPLDASLYHEG-ILWFTDLTTSDPLHIFPLAVGIVALVNVEWTFKTF 242 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 ++ + S + + P D A + V + P L +YW S V S+VQ Sbjct: 243 NLMRAGS--RRANLRPTLTDSM-ANVSRMAVVFLMAISLHAPTALTLYWLSSQVFSLVQN 299 Query: 554 AVIMKMHGAEIGLIDRLRSTFSKNYNS 580 + RL T SK ++ Sbjct: 300 VFLDLFLPISFTPHKRLDHTRSKRPDA 326 >gi|72081003|ref|YP_288061.1| putative inner membrane protein translocase component YidC [Mycoplasma hyopneumoniae 7448] gi|71914127|gb|AAZ54038.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448] Length = 609 Score = 56.9 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 103/327 (31%), Gaps = 29/327 (8%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + + + G+A K T ++ I K Sbjct: 278 KSGKDVSPETEKILSGYANLVKKLVFPTNFSRIDIQNKTYSWNNNDESAAKNIAFQNKIP 337 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV----------GNFGIAIMLTTVFVKLLF 375 A P W F A ++ L + ++I+ VF K++ Sbjct: 338 AFPIVSWAESWKLGPFYAIFVYPLSKIILWVTASQSLYEWSGWITILSILAVVVFTKIIS 397 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSP-----PQVLQKAMIQLYKTHNINPLAGC 430 F K +Q K ++ K++ Q ++ ++ LYK +N +P + Sbjct: 398 FIFRFKTIFGQNKQMELQLKKAKIDAKYENYKKNKVMQQRHRQEIVDLYKKNNFSPFSPF 457 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 IL+ +P+F A+++ + + + L A + G + + V Sbjct: 458 SQILVTMPIFIAVWRALQGIPSFK----VTYFLGLELAATSYQKLFEGYWIYLPIIIVTV 513 Query: 491 GIWPIIMSLSMFIQMKMSPPPAD-------KGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 + + + + K S + K Q + ++F+F F A L IYW Sbjct: 514 LVQALQQIIPKILNKKKSNRIMNVQENETLKKQQKTQRIVSIIFIFFGVIFQASLQIYWI 573 Query: 544 WSNVISIVQQ---AVIMKMHGAEIGLI 567 + I+Q + K + + Sbjct: 574 IGGIWEILQTLGIFYLQKSNFYREKMR 600 >gi|54020659|ref|YP_116204.1| putative inner membrane protein translocase component YidC [Mycoplasma hyopneumoniae 232] gi|71894022|ref|YP_279468.1| putative inner membrane protein translocase component YidC [Mycoplasma hyopneumoniae J] gi|53987832|gb|AAV28033.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232] gi|71852149|gb|AAZ44757.1| conserved hypothetical protein [Mycoplasma hyopneumoniae J] Length = 609 Score = 56.5 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 103/327 (31%), Gaps = 29/327 (8%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + + + G+A K T ++ I K Sbjct: 278 KSGKDVSPETEKILSGYANLVKKLVFPTNFSRIDIQNKTYSWNNNDESAAKNIAFQNKIP 337 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV----------GNFGIAIMLTTVFVKLLF 375 A P W F A ++ L + ++I+ VF K++ Sbjct: 338 AFPIVSWAESWKLGPFYAIFVYPLSKIILWVTASQSLYEWSGWITILSILAVVVFTKIIS 397 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSP-----PQVLQKAMIQLYKTHNINPLAGC 430 F K +Q K ++ K++ Q ++ ++ LYK +N +P + Sbjct: 398 FIFRFKTIFGQNKQMELQLKKAKIDAKYENYKKNKVMQQRHRQEIVDLYKKNNFSPFSPF 457 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 IL+ +P+F A+++ + + + L A + G + + V Sbjct: 458 SQILVTMPIFIAVWRALQGIPSFK----VTYFLGLELAATSYQKLFEGYWIYLPIIIVTV 513 Query: 491 GIWPIIMSLSMFIQMKMSPPPAD-------KGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 + + + + K S + K Q + ++F+F F A L IYW Sbjct: 514 LVQALQQIIPKILNKKKSNRIMNVQENETLKKQQKTQRIVSIIFIFFGVIFQASLQIYWI 573 Query: 544 WSNVISIVQQ---AVIMKMHGAEIGLI 567 + I+Q + K + + Sbjct: 574 IGGIWEILQTLGIFYLQKSNFYREKMR 600 >gi|320580881|gb|EFW95103.1| Mitochondrial integral inner membrane protein, putative [Pichia angusta DL-1] Length = 318 Score = 56.5 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 61/188 (32%), Gaps = 30/188 (15%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + K Q+++ + LQIP++ + + + + L+ Sbjct: 132 KERMKRQRQIFRDNGCQSWKFLALPALQIPLWITLSQTFRVLTGWTNVRATVLDPTLSTE 191 Query: 469 DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS--------------MFIQMK-----MSP 509 + L P++ I P+++ ++ M + + + P Sbjct: 192 GLGYLTNLTLSDPYF--------ILPVVLGVTALTNAEWNFRTADLMKLTTRGVRNSLRP 243 Query: 510 PPADKGQAMILNWMPV-VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID 568 D + L M + V + PA L IYW SN+ S+ Q ++ K Sbjct: 244 TAFDSV--INLTRMSICFLVVLSAQAPAALSIYWISSNIYSLAQNILLNKFMPLRYTPYA 301 Query: 569 RLRSTFSK 576 R + K Sbjct: 302 RSAPSTKK 309 >gi|302652675|ref|XP_003018183.1| mitochondrial export translocase Oxa2, putative [Trichophyton verrucosum HKI 0517] gi|291181797|gb|EFE37538.1| mitochondrial export translocase Oxa2, putative [Trichophyton verrucosum HKI 0517] Length = 336 Score = 56.5 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 90/279 (32%), Gaps = 74/279 (26%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL-LFFPLAKKQYVSTANMKNIQP 394 G + ++ P+ + + +I+ KL + A + I Sbjct: 58 SGLPWVLSIPITAITVRCCVALPLQVWSILKARQLQKLNPLLLTWSRVCQKKAMDEAIME 117 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 + + S Q + +LYK I P AG IL Q+PV+ A+ + + + M Sbjct: 118 GRHLFPKAIEVSWQQDFKLKRKELYKRWKIRPWAGYASIL-QLPVWLAMMECLRRMVGMS 176 Query: 455 H----------------APFW-----------GWIKDLAAADPTNIFTLFGILPFYLPGF 487 AP W DL ADP Sbjct: 177 GGLLSIIQSWIESKVDGAPIIEVEPSMAMEGALWFPDLLVADP----------------- 219 Query: 488 MHVGIWPIIMSLSMFIQ-------------MKMSPPPADKGQA-MILNWM---------P 524 + + P++++ SMF K+ A + +A IL P Sbjct: 220 --IHVLPVVLAASMFTNVTWGWKVKSAAEISKLPRSEAIRERAFKILKRFLQGLSIWLAP 277 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 V+ S PAGL+IYW S+ + Q ++ ++ + Sbjct: 278 VM---IYSQAPAGLLIYWISSSTFATAQTQIVRRVMRTK 313 >gi|332709872|ref|ZP_08429828.1| YidC/Oxa1 family membrane protein insertase [Lyngbya majuscula 3L] gi|332351243|gb|EGJ30827.1| YidC/Oxa1 family membrane protein insertase [Lyngbya majuscula 3L] Length = 389 Score = 56.5 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 2/119 (1%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G+AI+ T+ ++ FPL + MK Q Sbjct: 1 MDFGIGFISNNIMLPILDFFYGIVPSYGLAIIALTLVIRFALFPLNAGSIRNMRRMKVTQ 60 Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + + +E K + Q+ + NPLAGC P+L+Q+PV FA++ + S Sbjct: 61 PLMKKEQEAIKERYKDDPAKQQEEMSKLFQKFGNPLAGCLPLLVQMPVLFALFATLRGS 119 Score = 51.1 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 8/108 (7%) Query: 478 GILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD-----KGQAMILNWMPVVFVFALS 532 G + + +S+++ +S A Q + PV+F Sbjct: 257 GAFDDDGTIHWDIVGMILFFGISLYVNQLLSGSGAGSGQAGDQQKAVNQITPVLFSGMFL 316 Query: 533 SFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 FP AG+++Y +N+ +Q I+ L + + + Sbjct: 317 FFPLPAGVLMYIVVANIFQTIQT-FILSREPLPENLQEIVEQQEKEAK 363 >gi|312601631|gb|ADQ90886.1| Putative uncharacterized protein [Mycoplasma hyopneumoniae 168] Length = 609 Score = 56.5 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 103/327 (31%), Gaps = 29/327 (8%) Query: 266 SKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDL 325 + + + G+A K T ++ I K Sbjct: 278 KSGKDVSPEAEKILSGYANLVKKLVFPANFSRIDIQNKTYSWNNNDESAAKNIAFQNKIP 337 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLV----------GNFGIAIMLTTVFVKLLF 375 A P W F A ++ L + ++I+ VF K++ Sbjct: 338 AFPIVSWAESWKLGPFYAIFVYPLSKIILWVTASQSLYEWSGWITILSILAVVVFTKIIS 397 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSP-----PQVLQKAMIQLYKTHNINPLAGC 430 F K +Q K ++ K++ Q ++ ++ LYK +N +P + Sbjct: 398 FIFRFKTIFGQNKQMELQLKKAKIDAKYENYKKNKVMQQRHRQEIVDLYKKNNFSPFSPF 457 Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 IL+ +P+F A+++ + + + L A + G + + V Sbjct: 458 SQILVTMPIFIAVWRALQGIPSFK----VTYFLGLELAATSYQKLFEGYWIYLPIIIVTV 513 Query: 491 GIWPIIMSLSMFIQMKMSPPPAD-------KGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 + + + + K S + K Q + ++F+F F A L IYW Sbjct: 514 LVQALQQIIPKILNKKKSNRIMNVQENETLKKQQKTQRIVSIIFIFFGVIFQASLQIYWI 573 Query: 544 WSNVISIVQQ---AVIMKMHGAEIGLI 567 + I+Q + K + + Sbjct: 574 IGGIWEILQTLGIFYLQKSNFYREKMR 600 >gi|225619323|ref|YP_002720549.1| inner membrane protein [Brachyspira hyodysenteriae WA1] gi|225214142|gb|ACN82876.1| inner membrane protein [Brachyspira hyodysenteriae WA1] Length = 926 Score = 56.5 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 22/214 (10%) Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 + + + + + ++ + L+ K Q ++P I+ ++ Sbjct: 20 TIFYYFKVETQSSYTVSVILVSLIINILSLPLYNIAEKWQQKERDMQVKMKPMINNIKAV 79 Query: 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWI 462 +K +L + ++ I G +L+QIP F A Y + F+ I Sbjct: 80 YKGDQAYLLIRTCQRINGYKTIYAFRGVLGLLIQIPFFLAGYNFFTSLTGAETESFFL-I 138 Query: 463 KDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL-----SMFIQMKMSPPPADKGQA 517 K L AD + ++ + P IM+ + K++ + Sbjct: 139 KSLGEADKIIHIGNY-----------YINLLPFIMTAFSLASTFIYSKKLTFKESIPI-- 185 Query: 518 MILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 M + F+ L S PA L++YW+ + S Sbjct: 186 ---FLMSLFFLVFLYSSPAILLLYWTINCAFSFF 216 >gi|226287180|gb|EEH42693.1| inner membrane protein OXA1 [Paracoccidioides brasiliensis Pb18] Length = 514 Score = 56.5 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 80/242 (33%), Gaps = 39/242 (16%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVS----- 385 I + + + + ++ + G + + T V +++ A + Sbjct: 148 KAIGLDYGWGPSLLIETILESLHIHGGLPWVGATITTAVLLRVAMLKFAIDASDTSAKVA 207 Query: 386 --TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + IQ ++ + Q A + + +NI + ++QIP+ F Sbjct: 208 SVKHLTQPIQQEVKRCYRENDTIGMQRALSARRIINENYNIKLMK-LAYPMIQIPLNFGA 266 Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 ++V+ + + + W+ + DP I P+ L Sbjct: 267 FRVLRGMSALPVPGLDSESFLWLSSVTVHDPLF-------------------ILPVSTGL 307 Query: 500 SMFIQMKM-----SPPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M K+ S A +L +PV+ P L I+++ ++V++I+Q Sbjct: 308 LMHYTFKLGGEVSSSTDQTAMAAKPLLLYGLPVLSTVCTLFLPGILQIFFASTSVLAILQ 367 Query: 553 QA 554 Sbjct: 368 SY 369 >gi|149636666|ref|XP_001511643.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 248 Score = 56.5 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 68/189 (35%), Gaps = 26/189 (13%) Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA-MIQLYKTHNINPLAGCWPILLQIPV 439 + +++ K ++ + + + +LY HN +P + +Q+P+ Sbjct: 18 NIAKYLNHEISLRAKRLGWSKRIARLTHMNNMRRLVSELYVRHNCHPFKATLLVWIQLPM 77 Query: 440 FFAIYKVISI----SLEMRHAPF--------WGWIKDLAAADPTNIFTLFGILPFYLPGF 487 + + + +++ P W DL D T I Sbjct: 78 WVVVSVALRNLSVGAVDSEGLPIREQLSTGGALWFPDLTVLDSTLILP------------ 125 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + +GI ++ + +F K+ K + + V+ + ++ P+ + +YW S+ Sbjct: 126 VSLGILNLL-IVEVFALQKLEMSRFQKYLTHFIRGVSVLMIPIAATVPSSIALYWLCSSC 184 Query: 548 ISIVQQAVI 556 + + Q ++ Sbjct: 185 LGLSQNLLL 193 >gi|326480453|gb|EGE04463.1| inner membrane protein COX18 [Trichophyton equinum CBS 127.97] Length = 315 Score = 56.5 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 86/285 (30%), Gaps = 73/285 (25%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTAN 388 F ++ F+++ G + + T + A Sbjct: 30 NFHASNPNRIIDSSVLVAHDVIQGFHSITGLPWVLSIPLTAITLNPLLLTWSRVCQKKAM 89 Query: 389 MKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS 448 + + + + S Q + +LYK I P A IL Q+PV+ A+ + + Sbjct: 90 DEAFREGRHLFPKAIEASWQQDFKMKRKELYKRWKIRPWASYASIL-QLPVWLAMMESLR 148 Query: 449 ISLEMRH----------------APFW-----------GWIKDLAAADPTNIFTLFGILP 481 + M AP W DL ADPT+ Sbjct: 149 RMVGMSGGLLSIIQSWIESKVDGAPIIEVEPSMATEGALWFTDLLIADPTH--------- 199 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMK-----MSPPPADKGQ-------------AMILNWM 523 P++++ +MF + S K Q +L + Sbjct: 200 ----------ALPVVLAATMFTNVTWGWKVKSAAEISKLQRSEAIRERAFKTLKRVLQGL 249 Query: 524 -----PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 PV+ S PAGL++YW S+ + Q ++ ++ + Sbjct: 250 SIWLAPVM---IYSQAPAGLLVYWISSSTFATAQTQIVRRVMRTK 291 >gi|158294492|ref|XP_001688695.1| AGAP005624-PA [Anopheles gambiae str. PEST] gi|157015588|gb|EDO63701.1| AGAP005624-PA [Anopheles gambiae str. PEST] Length = 351 Score = 56.5 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 81/272 (29%), Gaps = 35/272 (12%) Query: 301 SITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNF 360 T F ++ P + + + + L W + L++ + N Sbjct: 46 EATVAGFWQTLSQSAPVAYVQQGMINLHDLTGLPWWATVILTTVGLRTLVTLPLAVYQNK 105 Query: 361 GIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQ-LY 419 +A + + K EK + K L Sbjct: 106 ILARLEQISLEMP-------ELIKELKAETAYAMKKFNWTEKEARIMYNHSLKKQWNNLI 158 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF---------------WGWIKD 464 N +P + QIP++ I + M P +GWI + Sbjct: 159 VRENCHPAKTMVLLWGQIPLWIVQSVAIRNLVSMLPDPTAIEAQIAYTELTLGGFGWIPN 218 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMP 524 L D + IF + G +++ I I + + K+ + + + Sbjct: 219 LTELDHSLIFPV-------ALGVINLSIIEIQAASRTKLPSKLQTIFTN-----LFRGLS 266 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++ V +S P+ L +YW S+ + Q ++ Sbjct: 267 ILMVPIAASVPSCLCLYWVTSSAYGLGQNLLL 298 >gi|237750773|ref|ZP_04581253.1| predicted protein [Helicobacter bilis ATCC 43879] gi|229373218|gb|EEO23609.1| predicted protein [Helicobacter bilis ATCC 43879] Length = 197 Score = 56.5 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 74/175 (42%), Gaps = 17/175 (9%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 ++ + + + + + + + + N+G++I+L ++ ++L L + + Sbjct: 4 ILYYIFIFPVEQVLEWALFTLFKATKNYGVSIILLSLIMQLFMLKLTFYFDKKATSFGAL 63 Query: 393 QPK-IDELREKFKQSPPQVLQKAMIQLYKTHNINP---LAGCWPILLQIPVFFAIYKVIS 448 + + +++E + LQ + LYK + +P L G + LQIP F A+ + Sbjct: 64 KAQCDSKIKEFKRVFKGAELQSYIRTLYKQRHFHPIFALFGLGGLALQIPFFIAMIH-LV 122 Query: 449 ISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + E + + WI DL+ D +F L + I P++M+ I Sbjct: 123 ENAEYLQSVRFLWIDDLSKPDSIMLFGL------------SIHILPLLMTAFTLI 165 >gi|330798642|ref|XP_003287360.1| hypothetical protein DICPUDRAFT_18752 [Dictyostelium purpureum] gi|325082627|gb|EGC36103.1| hypothetical protein DICPUDRAFT_18752 [Dictyostelium purpureum] Length = 378 Score = 56.5 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 90/281 (32%), Gaps = 34/281 (12%) Query: 289 FSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFM 348 + TI I E++ G FI + Sbjct: 76 IVDPNKINSAASNNNILEPTKLPTDNIDTITINLDKFKINDPELIPITGIPTFI----EV 131 Query: 349 LMSYFYNLVGNFGIAIM-LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP 407 ++ + + I+ TV ++L FP++ K V++A + I+P++D+ +E+ K Sbjct: 132 CLNKLHQFSHLPWLIIVPTFTVALRLALFPISIKSRVNSARLLEIKPQLDKFKEQQKLLR 191 Query: 408 PQ--------VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA--- 456 + + + + + +P+ L +P + E + Sbjct: 192 QKGAPLSERAEVSDKITTILREKGCHPIYSFLLPLSNLPFLVSSVFAFRDMAENYPSLKD 251 Query: 457 PFWGWIKDLAAADPTNIF-TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 W DLA++DP I T+ L +++L ++ Sbjct: 252 AGMLWFPDLASSDPLFILPTICSALYLLATELAFANSQSFLINLVKWVS----------- 300 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ-QAV 555 M V + S PA +YW S + +I Q Q Sbjct: 301 -----RIMSVSLILFSPSIPAICYLYWVPSAIFTIAQIQLF 336 >gi|156097693|ref|XP_001614879.1| inner membrane protein oxa1-2 [Plasmodium vivax SaI-1] gi|148803753|gb|EDL45152.1| inner membrane protein oxa1-2, putative [Plasmodium vivax] Length = 453 Score = 56.5 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 82/243 (33%), Gaps = 26/243 (10%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 ++ +++ +L ++ +I+ TT F++++ PL K + P Sbjct: 164 NYESSWYVELVYELLNCTKIMFDCSWMTSIVATTSFMRMIILPLTVSAERDRRKQKILNP 223 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTH---------NINPLAGCWPILLQIPVFFAIYK 445 I EL K K + K ++ K ++ P + Q P+FF Y Sbjct: 224 LIKELTNKLKSNAQDGNIKMALEFKKKILNIRNTHGISLIPKSIIMMAFFQTPLFFIFYF 283 Query: 446 VI---SISLEMRHAPFW---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 + + E+ + W+ L+ DP I L L + +I Sbjct: 284 SMKKMASYPEVFKEFTFESPLWLDSLSLPDPYYILPLLSSLLLLSNNELTA----LIDKA 339 Query: 500 SMFIQMKMSPPPADKGQAMI-------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + Q + + + +F S P+GL+IY + V ++ Sbjct: 340 LSNSKSSSLSGDDSEFQKKMKQVTKLAMRLFYISSLFFFKSMPSGLLIYLITNTVFQLLT 399 Query: 553 QAV 555 + Sbjct: 400 TQI 402 >gi|323348851|gb|EGA83089.1| Oxa1p [Saccharomyces cerevisiae Lalvin QA23] Length = 260 Score = 56.2 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 24/192 (12%), Positives = 63/192 (32%), Gaps = 18/192 (9%) Query: 371 VKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA-- 428 + L+ + ++ + ++L Q++ +L +H I Sbjct: 1 MFPLYVKSSDTVARNSHIKPELDALNNKLMSTTDLQQGQLVAMQRKKLLSSHGIKNRWLA 60 Query: 429 -GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 I + + F A+ + + ++ W DL ADP + F Sbjct: 61 APMLQIPIALGFFNALRHMANYPVDGFANQGVAWFTDLTQADPYLGLQVITAAVFISFTR 120 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + Q SP + +P++ + A + + +++Y++++ Sbjct: 121 L---------GGETGAQQFSSP------MKRLFTILPIISIPATMNLSSAVVLYFAFNGA 165 Query: 548 ISIVQQAVIMKM 559 S++Q ++ Sbjct: 166 FSVLQTMILRNK 177 >gi|6707005|gb|AAF25545.1|AF109218_5 lipoprotein precursor [Staphylococcus carnosus] Length = 225 Score = 56.2 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 80/195 (41%), Gaps = 35/195 (17%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ---- 393 + F+ ++ + ++G+AI++ + ++++ P Y ++ M+ Sbjct: 33 YNTFVKNMDNIIHWLGASFNNDYGLAIIVLVLAIRIIVLPFMLSNYKNSHMMREKMIIAK 92 Query: 394 PKIDELREKFKQSPPQVL----QKAMIQLYKTHNINPLA---GCWPILLQIPVFFAIYKV 446 P +D ++EK +++ Q + M+++YK +++NP+ GC P+L+Q+P+ ++ V Sbjct: 93 PDMDAVKEKVQRARTQEDKMAANQEMMEVYKKYDMNPMQSMLGCLPMLIQMPIIMGLFFV 152 Query: 447 I--SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + + + W +LA D +I + F+Q Sbjct: 153 LKYPSPGGITEHSHFLWF-NLAKPDIW---------------------ITVIAGVLYFLQ 190 Query: 505 MKMSPPPADKGQAMI 519 +S Q + Sbjct: 191 AYVSTFSMPPEQKQM 205 >gi|238783046|ref|ZP_04627073.1| Inner membrane protein oxaA [Yersinia bercovieri ATCC 43970] gi|238716047|gb|EEQ08032.1| Inner membrane protein oxaA [Yersinia bercovieri ATCC 43970] Length = 96 Score = 56.2 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 30/95 (31%), Gaps = 12/95 (12%) Query: 16 IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKN 75 +I AWQ + + N T + +Q A + +K Sbjct: 1 MIWQAWQVDNNPQPAAQTTQQTANTATGDKASQAVP------------ASGQGQLITVKT 48 Query: 76 PSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 L +IN +G + NL Y + S+ L Sbjct: 49 DVLSLTINTRGGDIEQANLLAYPDALGSDKTFELL 83 >gi|321461780|gb|EFX72808.1| hypothetical protein DAPPUDRAFT_325857 [Daphnia pulex] gi|321461781|gb|EFX72809.1| hypothetical protein DAPPUDRAFT_325858 [Daphnia pulex] Length = 332 Score = 56.2 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 79/243 (32%), Gaps = 36/243 (14%) Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVF-----VKLLFFPLAKKQYVSTANMKNIQPKID 397 L+ ++ A ++ + + L Y N+K I Sbjct: 61 VVNTQHLLETVHDYTHLPWWATIVVSTISLRLAITLPLAAYQHIIYARLGNLKPEMDAIL 120 Query: 398 ELREKFKQSPPQVLQKAMIQ---------------LYKTHNINPLAGCWPILLQIPVFFA 442 + +K + + + L + N + + QIP++ Sbjct: 121 KDLKKETDRAVIMYKWDAKKAKLAFHVSAKKQWNLLIQRDNCHQFKATVLLWGQIPLWVC 180 Query: 443 IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL--FGILPFYLPGFMHVGIWPIIMSLS 500 + S+ +R+ ++ + A + FG +P L H I P+ M+L+ Sbjct: 181 M------SVALRNMAMMLPVQTIDAQILYLSLSTGGFGWIP-NLTEVDHSLILPVFMALT 233 Query: 501 MF------IQMKMSPPPA-DKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 + K+ P +L +V V + PA + +YW+ S+V + Q Sbjct: 234 NLAIIQIQVMSKVGPSSRLSNAMMNVLRVFCLVMVPVAAYAPADVALYWTVSSVYGLAQN 293 Query: 554 AVI 556 V+ Sbjct: 294 LVL 296 >gi|302503230|ref|XP_003013575.1| mitochondrial export translocase Oxa2, putative [Arthroderma benhamiae CBS 112371] gi|291177140|gb|EFE32935.1| mitochondrial export translocase Oxa2, putative [Arthroderma benhamiae CBS 112371] Length = 336 Score = 56.2 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 90/279 (32%), Gaps = 74/279 (26%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL-LFFPLAKKQYVSTANMKNIQP 394 G + ++ P+ + + +I+ KL + A + I Sbjct: 58 SGLPWVLSIPITAITVRCCVALPLQVWSILKAQQLQKLNPLLLTWSRVCQKKAMDEAIME 117 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 + + S Q + +LYK I P AG IL Q+PV+ A+ + + + M Sbjct: 118 GRHLFPKAIEVSWQQDFKIKRKELYKRWKIRPWAGYASIL-QLPVWLAMMESLRRMVGMS 176 Query: 455 H----------------APFW-----------GWIKDLAAADPTNIFTLFGILPFYLPGF 487 AP W DL ADP Sbjct: 177 GGLLSIIQSWIESKVDGAPIIEIEPSMAMEGALWFPDLLVADP----------------- 219 Query: 488 MHVGIWPIIMSLSMFIQMK-----MSPPPADKGQA---------MILN--------WM-P 524 + + P++++ SMF + S K Q IL W+ P Sbjct: 220 --IHVLPVVLAASMFTNVTWGWKVKSAAEISKLQRSEAIRERSFKILKRVLQGLSIWLAP 277 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 V+ S PAGL+IYW S+ + Q ++ ++ + Sbjct: 278 VM---IYSQAPAGLLIYWISSSTFATAQTQIVRRVMRTK 313 >gi|308808203|ref|XP_003081412.1| Inner membrane protein translocase involved in respiratory chain assembly (ISS) [Ostreococcus tauri] gi|116059874|emb|CAL55581.1| Inner membrane protein translocase involved in respiratory chain assembly (ISS) [Ostreococcus tauri] Length = 430 Score = 55.8 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 70/207 (33%), Gaps = 21/207 (10%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + + ++ + +L+ P+A + ++A + ++ + ++ Sbjct: 12 WCATLAVSALCARLVTAPVAARTTKASATVSAASALAKATKQGDAERVSIKDVLEAMKEL 71 Query: 420 KTHN---INPLAGCWPILLQIPVF-FAIYKVISISLEMRH----APFWGWIKDLAAADPT 471 + + +P L QIP+F A+ V ++ E + W DL Sbjct: 72 RERSGVGAHPAWLVAGPLAQIPLFACAMMAVRRLASEGGSNGLISGGVFWFSDLTLPAMD 131 Query: 472 NIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI------LNWMPV 525 + P+ + PI+ + ++F + + A + + L WM + Sbjct: 132 IATMSAPMGPYGA-------VLPIVTAGALFANVNANFAAAAQQSRGMTIVKLCLEWMTL 184 Query: 526 VFVFALSSFPAGLIIYWSWSNVISIVQ 552 + P + YW S+ + Q Sbjct: 185 PMLLIGLQLPQAVHCYWITSSAYAYAQ 211 >gi|329937988|ref|ZP_08287470.1| membrane protein [Streptomyces griseoaurantiacus M045] gi|329302945|gb|EGG46834.1| membrane protein [Streptomyces griseoaurantiacus M045] Length = 248 Score = 55.8 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 19/220 (8%) Query: 363 AIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTH 422 AI+L T V+LL PL++ ++P+I ELRE+ + P + LQ+A+++L+ Sbjct: 27 AIVLFTALVRLLVHPLSRAAARGQKAGAALRPRIAELRERHRDDPRK-LQEAVLELHARE 85 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI-LP 481 ++PL GC P LLQ P F +Y + S S + LAA G P Sbjct: 86 RVSPLGGCLPSLLQAPAFLLLYHLFSSSSLGDDPNGLLHHRLLAAPLGGRWADALGHGGP 145 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKM---------------SPPPADKGQA--MILNWMP 524 F G +++ ++ ++ ++ F + + P A A + ++ Sbjct: 146 FGAQGLVYLALFALVGVVATFTYRRTRRGMAAAAPAVAGHGTGPAAGALGAVTRVTPFLS 205 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 + + ++ P +Y S + V++AV+ + E Sbjct: 206 FITLVTVALVPLAAALYVVTSAAWTAVERAVLDREASVEP 245 >gi|159027290|emb|CAO89385.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 382 Score = 55.8 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +F+ +V ++G AI+ T+ V+ FPL+ Q + M+ Q Sbjct: 1 MDFGVGFISTNIMLPILDFFFRIVHSYGFAIIALTLVVRFAVFPLSAGQIRNMRKMRITQ 60 Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + E + + + Q+ + NPLAGC P+LLQ+P+ A++ + S Sbjct: 61 PLMKERQAEIQQRYKNDPQKQQEEMGKLMQELGNPLAGCLPLLLQMPILLALFATLRGS 119 Score = 55.4 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 43/99 (43%), Gaps = 12/99 (12%) Query: 490 VGIWPIIMSLSMFIQMKMSPPPAD-----KGQAMILNWMPVVFVFALSSFP--AGLIIYW 542 + I +S+++ ++S A + Q + P++F FP AG+++Y Sbjct: 269 ILAMVIAFGISIYVNQELSGAGAPSGGAAQQQQTVNKITPIIFSMMFLFFPLPAGVLMYI 328 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +N+ +Q ++M+ L + L+ ++ ++ Sbjct: 329 LTANIFQTIQTVILMR-----EPLPENLQKLVAEQEKTE 362 >gi|111119058|gb|ABH05957.1| mitochondrial Oxa1p [Paracoccidioides brasiliensis] Length = 474 Score = 55.8 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 81/242 (33%), Gaps = 39/242 (16%) Query: 332 MLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVS----- 385 I + + ++ + ++ + G + + T V +++ A + Sbjct: 148 KAIGLDYGWGPSRLIETILESLHIHGGLPWVGATITTAVLLRVAMLKFAIDASDTSAKVA 207 Query: 386 --TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + IQ ++ + Q A + + +NI + ++QIP+ F Sbjct: 208 SVKHLTQPIQQEVKRCYRENDTIGMQRALSARRIINENYNIKLMK-LAYPMIQIPLNFGA 266 Query: 444 YKVISISLEM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 ++V+ + + + W+ + DP I P+ L Sbjct: 267 FRVLRGMSALPVPGLDSESFLWLSSVTVHDPLF-------------------ILPVSTGL 307 Query: 500 SMFIQMKMS---PPPADKGQAM----ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 M K+ D+ +L +PV+ P L I+++ ++V++I+Q Sbjct: 308 LMHYTFKLGGEVSASTDQTAMAAKPLLLYGLPVLSTVCTLFLPGILQIFFASTSVLAILQ 367 Query: 553 QA 554 Sbjct: 368 SY 369 >gi|296118600|ref|ZP_06837178.1| membrane protein OxaA [Corynebacterium ammoniagenes DSM 20306] gi|295968499|gb|EFG81746.1| membrane protein OxaA [Corynebacterium ammoniagenes DSM 20306] Length = 305 Score = 55.4 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 + +AI+L T +K + S M+ +QP + E+R K+ + + M ++Y Sbjct: 10 WILAIVLLTWTLKAIMVKPTLSSLRSQRKMQELQPLLQEVRTKYANDKTK-QAEEMQKVY 68 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISI 449 K + P+AGC P++ QIP+F ++ V+ Sbjct: 69 KDAKVRPMAGCLPMVAQIPMFIGLFHVLRS 98 Score = 52.7 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 25/62 (40%) Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 L MP + V + +P GL+ Y + V + VQ ++ E ++ + + Sbjct: 225 LWVMPGMLVISGFIWPIGLLFYMLANTVWTFVQTRMVNAKMDREEEEAEQAKIELKRTTA 284 Query: 580 SQ 581 + Sbjct: 285 PK 286 >gi|194209082|ref|XP_001488534.2| PREDICTED: similar to mitochondrial COX18 [Equus caballus] Length = 336 Score = 55.4 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 64/163 (39%), Gaps = 31/163 (19%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----------SLEMRHAP 457 + +++ + +LY N +P + +Q+P++ + + S++ + A Sbjct: 153 KNMRRLVSELYVRDNCHPFKATVLVWIQLPMWIFMSIALRNFSTGAARSEGFSVQEQLAS 212 Query: 458 F-WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 W +DL A D T I + + + +F K+ Q Sbjct: 213 GGVLWFRDLTALDSTWIL---------PVSVGVINLLIV----EIFALQKIGMSR---FQ 256 Query: 517 AMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 I +++ V+ + ++ P+ +++YW S+ + + Q ++ Sbjct: 257 TYITHFVRAVSVLIIPVAATLPSSIVLYWLCSSFMGLSQNLLL 299 >gi|169616061|ref|XP_001801446.1| hypothetical protein SNOG_11202 [Phaeosphaeria nodorum SN15] gi|160703104|gb|EAT81701.2| hypothetical protein SNOG_11202 [Phaeosphaeria nodorum SN15] Length = 434 Score = 55.4 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 75/236 (31%), Gaps = 31/236 (13%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + S + N + +IML V V+ F A + ++P + Sbjct: 50 WGLTTVFERTIESIYLNTGYGWAGSIMLAAVAVRGATFFFQALSSDRMAALAALKPLTEP 109 Query: 399 LREKFKQSPPQVLQK-AMIQLYKTHNIN--PLAGCWPI----LLQIPVFFAIYKVISISL 451 ++EK + + ++ + + + + G + + ++Q + F+ ++ + Sbjct: 110 IQEKLTAAIARGDKQAEQMYKMQQAQVMAPHMGGMFSMGGFMIIQAWIGFSAFRCLRAMG 169 Query: 452 EM----RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMSLSMFIQM 505 + + W KDL DP + FY M G+ Q Sbjct: 170 ALPVPGMANDGFFWFKDLTVNDPYYLIPAAITGIFYSLFKMGGETGVSAEAAG-----QQ 224 Query: 506 KMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV------QQAV 555 + + ++ + S PA L +Y+ S V+ Q Sbjct: 225 -------NAFRQSLMTGLAFFMGIVTSFQPAVLQLYFLTSGVLGAGTGYLLRQNWF 273 >gi|166363143|ref|YP_001655416.1| putative inner membrane protein translocase component YidC [Microcystis aeruginosa NIES-843] gi|166085516|dbj|BAG00224.1| inner membrane protein [Microcystis aeruginosa NIES-843] Length = 382 Score = 55.0 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +F+ +V ++G AI+ T+ V+ FPL+ Q + M+ Q Sbjct: 1 MDFGVGFISTNIMLPILDFFFRIVHSYGFAIIALTLVVRFAVFPLSAGQIRNMRKMRITQ 60 Query: 394 PKIDELRE--KFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 P + E + + + Q+ + NPLAGC P+LLQ+P+ A++ + S Sbjct: 61 PLMKERQTEIQQRYKNDPQKQQEEMGKLMQELGNPLAGCLPLLLQMPILLALFATLRGS 119 Score = 55.0 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 43/99 (43%), Gaps = 12/99 (12%) Query: 490 VGIWPIIMSLSMFIQMKMSPPPAD-----KGQAMILNWMPVVFVFALSSFP--AGLIIYW 542 + I +S+++ ++S A + Q + P++F FP AG+++Y Sbjct: 269 ILAMVIAFGISIYVNQELSGAGAPSGGAAQQQQTVNKITPIIFSMMFLFFPLPAGVLMYI 328 Query: 543 SWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNSQ 581 +N+ +Q ++M+ L + L+ ++ ++ Sbjct: 329 LTANIFQTIQTVILMR-----EPLPENLQKLVAEQEKTE 362 >gi|213621389|ref|ZP_03374172.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 45 Score = 55.0 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 493 WPIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVFALSSFPA 536 PI+M ++MF KMSP D Q I+ +MPV+F FP+ Sbjct: 1 MPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPS 45 >gi|26554487|ref|NP_758421.1| putative inner membrane protein translocase component YidC [Mycoplasma penetrans HF-2] gi|38503022|sp|Q8EU91|OXAA_MYCPE RecName: Full=Membrane protein oxaA gi|26454497|dbj|BAC44825.1| conserved hypothetical protein [Mycoplasma penetrans HF-2] Length = 379 Score = 55.0 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 58/321 (18%), Positives = 114/321 (35%), Gaps = 26/321 (8%) Query: 275 FKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLI 334 F+ + D + + P S + I + Sbjct: 58 FQTMVDPTVKTSTTIGSGMEFGFPFGSTGDFRYDLTSGANNEYYAFTSTQWNISDYGPFF 117 Query: 335 DWGWFYFIAKPMFMLMSYFYNLVG--NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + Y A + +M ++ G + + I + ++L+ F ++ + + + M I Sbjct: 118 GL-FVYPGAMLVLSIMYPLRDVWGGLDALLGIFVLLFIIRLITFLISIRSTMQSERMSEI 176 Query: 393 QPKIDELREKFKQSP-----PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV- 446 Q K+ E+ K+K Q Q +LYK +NI P A + + +P+F +Y+V Sbjct: 177 QGKLAEINAKYKDVKKDMAMRQKKQLETQELYKKYNIKPFAMFEQMFVTMPIFLIVYRVV 236 Query: 447 ----------ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 + + +P +L+ IF L I+P + I Sbjct: 237 TILRPIKVINLFNIWALSASPLSEITSNLSNGGWVFIFFLLIIVPSQIISQKIPQILAKR 296 Query: 497 MSL-SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ-- 553 + + + K + K + + VV VF + PA + +YW S++ +I Q Sbjct: 297 RNANARALSQKGNDSA--KKMRISQTVVMVVLVFVVVQSPASVGLYWFLSSLFTIAQSVI 354 Query: 554 --AVIMKMHGAEIGLIDRLRS 572 I+K + L ++LR Sbjct: 355 IHHYIVKRKTKGVSLEEKLRE 375 >gi|291401638|ref|XP_002717160.1| PREDICTED: mitochondrial COX18 [Oryctolagus cuniculus] Length = 333 Score = 55.0 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 63/190 (33%), Gaps = 31/190 (16%) Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 + + + + + + +++ + +LY N +P + +Q+P++ Sbjct: 123 ASRLNQEVALRANQFGWSKRVARLTYLRNMKRLVSELYVRDNCHPFKATVLVWVQLPMWI 182 Query: 442 AIYKVISISL------------EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 + + E W DL A D T I Sbjct: 183 FMSVALRNFSTGTAHSEGLSVQEQFTTGGVLWFPDLTALDSTWIL---------PVSVGV 233 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYWSWSN 546 + + + +F K + Q I ++ + V+ + ++ P+ L +YW S+ Sbjct: 234 INLLIV----EIFALQK---AGMSRFQIYITHFVRTLSVLMIPIAATVPSSLALYWLCSS 286 Query: 547 VISIVQQAVI 556 + + Q ++ Sbjct: 287 FMGLSQNLLL 296 >gi|302840911|ref|XP_002952001.1| hypothetical protein VOLCADRAFT_105325 [Volvox carteri f. nagariensis] gi|300262587|gb|EFJ46792.1| hypothetical protein VOLCADRAFT_105325 [Volvox carteri f. nagariensis] Length = 376 Score = 55.0 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 35/243 (14%), Positives = 76/243 (31%), Gaps = 41/243 (16%) Query: 340 YFIAKPMFMLMSYFYNLVGNFGIA-IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 +F A + + ++ IML + ++L FPL +A M + Sbjct: 68 FFAASWCISGLQAVHEMLDTPWWVSIMLFNISLRLCTFPLMVLAQRGSAKMMEFNYALLH 127 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNI----------NPLAGCWP----ILLQIPVFFAIY 444 ++ + + + +L+ +P+ ++ VF +I+ Sbjct: 128 AKKLQEAAMKATNRAEHDRLFNAFRTEYTAQVSKHGDPVKTALMVPGVMIFNGFVFLSIF 187 Query: 445 KV---ISISLEMR-------HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 + + +R W DL DP + L + Sbjct: 188 NGISKLMAAKVLRRCAVPSLTTGGALWFSDLTQPDPFFGLPIMCTLVTLAMVEYGIN--- 244 Query: 495 IIMSLSMFIQMKMSPPPADKGQA-MILNW----MPVVFVFALSSFPAGLIIYWSWSNVIS 549 + + P P+++ QA + W + +F+ A + AG + W + Sbjct: 245 -LAGDA-------GPMPSERQQATKTMKWVFRVLAFMFIPAGNYVAAGTALLWVSNTAFG 296 Query: 550 IVQ 552 +VQ Sbjct: 297 VVQ 299 >gi|327275387|ref|XP_003222455.1| PREDICTED: mitochondrial inner membrane protein COX18-like [Anolis carolinensis] Length = 212 Score = 55.0 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 61/184 (33%), Gaps = 25/184 (13%) Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 + + + + + + L++ + LY N +P+ I +QIP+ Sbjct: 1 MAKQKVNLFISVYAKQQGWSEKLARLHFKKNLKRIVSDLYVRDNCHPVKASLLIWIQIPL 60 Query: 440 FFAIYKVISISLEMR------------HAPFWGWIKDLAAADPTNIFTLFGILPFYLPGF 487 + + + R W DL DPT I Sbjct: 61 WVFVSIALRNFSVGRAYSAGLFIQEQLSTGGMLWFPDLTVPDPTWIMP------------ 108 Query: 488 MHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + +G+ ++ + +F K+ + + + + ++ P+ + +YW S+ Sbjct: 109 ITLGVLNLL-IVEIFALRKIESSRFQRYATNFFRGISIFMIPVAATVPSAIALYWVSSSF 167 Query: 548 ISIV 551 + ++ Sbjct: 168 MGLL 171 >gi|147906843|ref|NP_001090111.1| COX18 cytochrome c oxidase assembly homolog [Xenopus laevis] gi|77748384|gb|AAI06494.1| MGC131222 protein [Xenopus laevis] Length = 381 Score = 55.0 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 86/271 (31%), Gaps = 55/271 (20%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF- 376 + F + ML+S + I+ TV ++ Sbjct: 87 LSAASTGNIGSGFGWYESLSDSAPVNLAESMLISLHETSGMPWWANIICATVALRTTVTL 146 Query: 377 PLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA------------------MIQL 418 PL+ Q A ++N+QP+ID L ++ + + L Sbjct: 147 PLSVYQMYILAKVENLQPEIDALAKRLRYEVSVYGNQHGWTDKVARFQFRKNLRRITSGL 206 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHA-------------PFWGWIKDL 465 Y N +P+ I +QIP++ + + R A W DL Sbjct: 207 YVRDNCHPVKASLLIWIQIPMWIFVSIALRNISLNRTADTTGDAVQKQLTEGGLLWFPDL 266 Query: 466 AAADPTNIF--TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM 523 D T + TL + F + F I LS F Q +I N++ Sbjct: 267 TVPDSTWVLPVTLGLLNLFIVEIFALRKI-----ELSRF-------------QKIITNFI 308 Query: 524 ---PVVFVFALSSFPAGLIIYWSWSNVISIV 551 + + ++ P+ + +YW S+ + + Sbjct: 309 RAISIAMIPIAATVPSSMALYWVTSSCVGLA 339 >gi|88607139|ref|YP_505134.1| hypothetical protein APH_0541 [Anaplasma phagocytophilum HZ] gi|88598202|gb|ABD43672.1| putative membrane protein [Anaplasma phagocytophilum HZ] Length = 122 Score = 54.6 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 47/121 (38%), Positives = 77/121 (63%), Gaps = 1/121 (0%) Query: 310 AGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTV 369 GAKE + Y+ L IP F+ +D+G YFI KP+F+L+ YF+ L+GNFG+AI++ TV Sbjct: 1 MGAKELELLDQYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQYFHKLLGNFGLAIVMLTV 60 Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +KL+ FPL+ + YVS +K +QP++ ++E +K + K + L+K H ++P+ Sbjct: 61 AIKLVAFPLSMRSYVSMFKLKRLQPEVLRIKELYKTDDL-RISKEIASLFKKHKVSPVNE 119 Query: 430 C 430 Sbjct: 120 F 120 >gi|307109135|gb|EFN57373.1| hypothetical protein CHLNCDRAFT_142761 [Chlorella variabilis] Length = 632 Score = 54.6 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 51/166 (30%), Gaps = 46/166 (27%) Query: 425 NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-----GWIKDLAAADPTNIFTLFGI 479 +P L Q+PVF I ++ + P + W DL + Sbjct: 240 HPAWALASPLAQLPVFITAMAAIR-TMSLSGWPGFSTGGGAWFPDLTLP-------AMDL 291 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFI------------------QM----KMSPPPADKGQA 517 + P M + P+ + LSM Q + P + QA Sbjct: 292 ATWTAPMGMAGVVLPVGIVLSMLANIDAAFTGKRACRMVAGWQQLDAKRRQLPAGSRQQA 351 Query: 518 MILNW-----------MPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 ++ W M V P G + YW+ + ++++Q Sbjct: 352 SVMLWVMGGLRLLLEWMMVPLFAIALQLPQGALCYWAAGSGLALLQ 397 >gi|319950012|ref|ZP_08023991.1| putative inner membrane protein translocase component YidC [Dietzia cinnamea P4] gi|319436323|gb|EFV91464.1| putative inner membrane protein translocase component YidC [Dietzia cinnamea P4] Length = 248 Score = 54.6 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 24/197 (12%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + ++++ + VG+ + ++ + + + + Sbjct: 9 SLVMKFWHWALSFVVDP-DSGVAWVGSVLLLVVTVRLLLLRSMWRQQYSMRKMAQLAPKM 67 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI--- 449 + ++ +++ Q K M LY +NPLAGC P+L+QIPVF +Y V+ Sbjct: 68 KELQNKYKDRKSPEDRQEQAKEMQALYADAGVNPLAGCLPLLVQIPVFLGLYYVLLNFSP 127 Query: 450 --------------SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP- 494 + + + + I ++ PG + I Sbjct: 128 PGKSIEEASQMTNGAFGPEQVSSFLNAEIFGVPLASYIRMPQEVMDSLHPGLVREDILML 187 Query: 495 -----IIMSLSMFIQMK 506 ++ ++ FI M Sbjct: 188 AVPLFVLAGIATFINMW 204 >gi|296822736|ref|XP_002850334.1| inner membrane protein COX18 [Arthroderma otae CBS 113480] gi|238837888|gb|EEQ27550.1| inner membrane protein COX18 [Arthroderma otae CBS 113480] Length = 312 Score = 54.6 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 87/294 (29%), Gaps = 68/294 (23%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + H+ +++P I + + +++ KL Sbjct: 16 LRHHHPSISLPTKRSFHASNPNRIIDSSVLIAHDIIQGFHSATVWSLLKAQQLQKLNPLL 75 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINPLAGCWPILLQ 436 + + M + L ++ Q + +LYK I P + LQ Sbjct: 76 ITWSRVFQKKAMDKSVIEGKHLSPIAVEAVWQRDLRIKKKELYKRWKIRP-WASYASFLQ 134 Query: 437 IPVFFAIYKVISISLEMRH----------------APFW-----------GWIKDLAAAD 469 +PV+ A+ + + + M AP W DL AAD Sbjct: 135 LPVWLAMMESLRRMVGMSGGLLSIIQSWIESKVDGAPIIQIEPSMAMEGALWFPDLLAAD 194 Query: 470 PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQM----KMSPPPADKGQ--------- 516 PT+ PII++ +MF + K+ Sbjct: 195 PTH-------------------ALPIILAATMFTNVTWGWKVKSAAEISMMRRGEAIRER 235 Query: 517 -----AMILNWMPVVFVFALSSF--PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 IL + + + S PAGL+IYW S+ + Q ++ + + Sbjct: 236 ALKLLKRILQGLSIWLAPVMISSGAPAGLLIYWISSSTFATAQTQIVRRFMRTK 289 >gi|325973709|ref|YP_004250773.1| membrane protein OxaA [Mycoplasma suis str. Illinois] gi|323652311|gb|ADX98393.1| membrane protein OxaA [Mycoplasma suis str. Illinois] Length = 399 Score = 54.2 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 37/333 (11%), Positives = 99/333 (29%), Gaps = 28/333 (8%) Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG---AKEFPTIHHYEKDLAI 327 F S F A + ++ F + + Sbjct: 65 FQSMFTSYVFHSNEAGVGLEAAYHSGSSQRTNDLRYDAFPWTPNPWAYWPLVSSGNGFGP 124 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMS--YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 ++ + + F + N +I++ + +K + F + Sbjct: 125 FIMWLVYPFTRVFLYLIWTFRGTQDSFMDKSGLNVVCSILIILLVMKSIVFLTIFRAQYY 184 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN---------PLAGCWPILLQ 436 + + + ++ ++ K+ + + + + ++ P + + Sbjct: 185 SDLQQRHKKNLERIKSKYTTDKFDRKELRTMSVLRQQEVSRYCKKHGLKPFSALENFFIN 244 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 P+F IYK+++I+ ++ + +G I + IFT F + + F + I + Sbjct: 245 TPIFLVIYKLMTITRPVKFSKLFG-IMPFSKTPINMIFTDFLSVGWVYILFFAIAIPVNL 303 Query: 497 MS--LSMFIQMKMSPPPADK-----------GQAMILNWMPVVFVFALSSFPAGLIIYWS 543 S + + K P D + N + V + + L +Y+ Sbjct: 304 YSQKIPSRLMKKRFPSLQDDVSLKVKDINVLSSKKLQNIISVSLIIFSLFWSTSLAVYYF 363 Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 ++++ +I +I + L Sbjct: 364 FNSLFNIAFSYIIHSILKKRKEKESALTKKLKN 396 >gi|322391336|ref|ZP_08064806.1| SpoIIIJ family protein [Streptococcus peroris ATCC 700780] gi|321145762|gb|EFX41153.1| SpoIIIJ family protein [Streptococcus peroris ATCC 700780] Length = 327 Score = 54.2 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 80/221 (36%), Gaps = 34/221 (15%) Query: 372 KLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA--------MIQLYKTHN 423 +LL PL Q + ++ E + + + + K H Sbjct: 93 RLLILPLGIYQSWKATLHSEKMNALKDVLEPHQTRLKEATTQEEKLEAQQALFAAQKEHG 152 Query: 424 INPL--AGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL-FGIL 480 I+ L GC+PIL+Q+P F AIY + + A F G +A P+ I G+L Sbjct: 153 ISMLGGVGCFPILIQLPFFSAIYFAAQHTEGVSEASFMG----IALGSPSWILLACAGVL 208 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWM-PVVFVFALSSFPAGLI 539 + G+ + Q + +M P++ V PA + Sbjct: 209 YYLQSLLSLHGV----------------EDETQREQLKKMIYMSPLMIVMFSIFSPASVT 252 Query: 540 IYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 +Y+ +I I QQ +I + L ++R F+KN Sbjct: 253 LYFVVGGIIMIFQQFIIN--YLIRPKLRKKVREEFAKNPPK 291 >gi|170077612|ref|YP_001734250.1| putative inner membrane protein translocase component YidC [Synechococcus sp. PCC 7002] gi|169885281|gb|ACA98994.1| inner membrane protein YidC/OxaA [Synechococcus sp. PCC 7002] Length = 388 Score = 54.2 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 6/121 (4%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +D+G + M ++ +FY +V ++G AI+ T+ ++ +PL+ K S K Q Sbjct: 1 MDFGIGFLSNNVMLPILDFFYGIVPSYGFAIIALTLVIRFAVYPLSAKSIRSMRRTKITQ 60 Query: 394 PKIDEL----REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 P + + +E++K P + Q+A + NPLAGC PILLQ+P+ FA++ + Sbjct: 61 PLMQKRVKEIQERYKNDPAK--QQAAMSEVYKEFGNPLAGCLPILLQMPILFALFATLRG 118 Query: 450 S 450 S Sbjct: 119 S 119 Score = 43.8 bits (101), Expect = 0.071, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 7/63 (11%) Query: 521 NWMPVVFVFALSSFP--AGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNY 578 P++F FP AG+++Y + +N VQ ++ + L + L+ + Sbjct: 310 KITPLIFSGMFLFFPLPAGVLMYMTIANAFQTVQTFILT-----KEPLPENLQKLVDEQE 364 Query: 579 NSQ 581 S+ Sbjct: 365 KSE 367 >gi|315056141|ref|XP_003177445.1| inner membrane protein COX18 [Arthroderma gypseum CBS 118893] gi|311339291|gb|EFQ98493.1| inner membrane protein COX18 [Arthroderma gypseum CBS 118893] Length = 336 Score = 54.2 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 69/208 (33%), Gaps = 73/208 (35%) Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH------------ 455 Q + +LYK I P + LQ+P++ A+ + + + M Sbjct: 131 QQDFKLKRKELYKRWKIRP-WASYASFLQLPIWLAMMESLRRMVGMSGGLLSIIQSWIES 189 Query: 456 ---------------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 A W DL ADPT+ PII++ + Sbjct: 190 KADAQPVIQVEPSMAAEGALWFPDLLMADPTH-------------------ALPIILAAT 230 Query: 501 MFIQ-------------MKMSPPPADKGQA-MILN--------WMPVVFVFALSSFPAGL 538 MF KM A + +A IL W+ V +++ + PAGL Sbjct: 231 MFTNVTWGWKVKSAAEISKMRRSEAIRERAFKILKRILQGLSIWLAPVMIYSGA--PAGL 288 Query: 539 IIYWSWSNVISIVQQAVIMK--MHGAEI 564 +IYW S+ + Q ++ + A Sbjct: 289 LIYWISSSTFATAQTQIVRRVIRTKAPP 316 >gi|289524495|ref|ZP_06441349.1| stage III sporulation protein J [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502264|gb|EFD23428.1| stage III sporulation protein J [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 104 Score = 53.8 bits (127), Expect = 7e-05, Method: Composition-based stats. Identities = 40/104 (38%), Positives = 72/104 (69%), Gaps = 1/104 (0%) Query: 346 MFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQ 405 M ++++FY + ++GIAI+L T+ +++L +PL+ KQ VS M+ IQP++ L+EK+K Sbjct: 1 MLGVLNFFYEISNSYGIAIILLTILIRILLYPLSHKQLVSMKKMQQIQPRLKTLQEKYKD 60 Query: 406 SPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 Q L + +++LYK + +NP AGC P+L+Q+P+ +++VI Sbjct: 61 -DRQKLNQEVMKLYKEYGVNPAAGCLPLLVQLPILILLFRVIMN 103 >gi|320594158|gb|EFX06561.1| hypothetical protein CMQ_6882 [Grosmannia clavigera kw1407] Length = 438 Score = 53.8 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 43/154 (27%), Gaps = 33/154 (21%) Query: 442 AIYKVISISLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPI----- 495 A+ + +LE W DL ADP ++ LP L + + P Sbjct: 278 AVLSALPSTLEPSLTTGGCLWFPDLTVADPYHV------LPLALSAMLIANVLPATDAGR 331 Query: 496 --IMSLSMFIQMKMSPPPADKGQ-----------AMILNWMPVVFVFALSSFPAGLIIYW 542 + L S P Q L M F FPA + +YW Sbjct: 332 RALFGLG---PQSSSSPVGGTAQVTTEGAFGRGLQRTLLIMSASIGFVTMHFPAAIHLYW 388 Query: 543 SWSNVISIVQQAVIMKMH-GAEIGLIDRLRSTFS 575 S S VI + A ++ Sbjct: 389 LSSAATS----FVITRSLRKARPLPERNIKPANK 418 >gi|297160114|gb|ADI09826.1| hypothetical protein SBI_06706 [Streptomyces bingchenggensis BCW-1] Length = 240 Score = 53.8 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 10/130 (7%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 AI+L T+ V+ PLA+ + PK+ EL + + P+ L+ AM +LY Sbjct: 27 TAAAIVLFTLCVRAALHPLARAAVRGEKARAALAPKVAELNRRH-KRDPERLRHAMAELY 85 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISI--------SLEMRHAPFWG-WIKDLAAADP 470 + +++P+AGC P L+Q+PVFF +Y + S + AP G W DLA Sbjct: 86 EKESVSPVAGCLPTLVQLPVFFVMYHLFSTGSGAGDLLDHTLAGAPLGGRWGGDLAGPHG 145 Query: 471 TNIFTLFGIL 480 LF ++ Sbjct: 146 AVYLALFVLI 155 >gi|327294149|ref|XP_003231770.1| hypothetical protein TERG_07389 [Trichophyton rubrum CBS 118892] gi|326465715|gb|EGD91168.1| hypothetical protein TERG_07389 [Trichophyton rubrum CBS 118892] Length = 316 Score = 53.8 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 93/270 (34%), Gaps = 41/270 (15%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM-LTTVFVKL-LFFPLAKKQYVST 386 F ++ F+++ G + + LT + V+L + Sbjct: 30 NFHASNPNRIIDSSILVAHDVIQGFHSITGLPWVLSIPLTAITVRLNPLLLTWSRVCQKK 89 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 A + I + + S Q + +LYK I P A IL Q+PV+ A+ + Sbjct: 90 AMDEAIMKGRHLFPKTIEASWQQDFKLKRKELYKRWKIRPWASYASIL-QLPVWLAMMES 148 Query: 447 ISISLEMRHAPFWG---WIKDLAAADPTNI------FTLFGILPF-YLPGFMHVGIWPII 496 + + M WI+ + D I + G L F L P+I Sbjct: 149 LRRMVGMSGGLLSIIQSWIE--SKVDGARIIEVEPSMAIEGALWFPDLLIGDPTHALPVI 206 Query: 497 MSLSMFIQMK-----MSPPPADKGQA---------MILN--------WM-PVVFVFALSS 533 ++ +MF + S K Q IL W+ PV+ S Sbjct: 207 LAATMFTNVTWGWKVKSAAEISKLQRSEAIRERAFKILKRVLQGLSIWLAPVM---IYSQ 263 Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 PAGL+IYW S+ + Q ++ ++ + Sbjct: 264 APAGLLIYWISSSTFATAQTQIVRRVMQTK 293 >gi|145480521|ref|XP_001426283.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124393357|emb|CAK58885.1| unnamed protein product [Paramecium tetraurelia] Length = 362 Score = 53.8 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 85/233 (36%), Gaps = 28/233 (12%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 F + +++Y ++ + + LT + + PL Q T + + P Sbjct: 62 PLQVFDPVVDFGSGILTYLHDCHIPWVGVLSLTCIIARSTLLPLIYLQMKRTTRLATVIP 121 Query: 395 KIDELREKFKQSPPQVLQKAM--IQLYKTHNINP----LAGCWPILLQIPVFFAIYKVIS 448 I +++ ++ +K ++L + + + IP+ + I Sbjct: 122 AIAQMKRLIDKTNYSKPKKFFTLMRLSYKIVHSQRLKWMRLFLYNVFHIPMLITLIWSIR 181 Query: 449 ISL--EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 L E + WI L+ DP I ++ +Y +Q Sbjct: 182 RLLIDESFKTTAFLWIPSLSNMDPYFIVPALTVICYYYN-----------------LQRF 224 Query: 507 MSPPPADKGQAM---ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 ++P D + + ++ ++++ L+++P + IY ++ SI+Q +++ Sbjct: 225 ITPENKDTLPSKLRNVGQFLLILWLPFLANWPCAIQIYMLFNAFFSIIQTSIM 277 >gi|170096969|ref|XP_001879704.1| predicted protein [Laccaria bicolor S238N-H82] gi|164645107|gb|EDR09355.1| predicted protein [Laccaria bicolor S238N-H82] Length = 394 Score = 53.5 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 86/242 (35%), Gaps = 41/242 (16%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 W +A ++ + I+ + +L P A + ++A M+ IQ + Sbjct: 124 WSPIGLVAWTYEVINVTT---GLPWFWTIVAGSTVCRLFCLPFAIRAARASARMRGIQTE 180 Query: 396 IDELREKFKQSP-------PQVLQKAMIQLYKTHNINPLAGCWPILLQ-----IPVFFAI 443 + ++REK + Q M LY + + + I +FFA Sbjct: 181 MTKVREKIGTAAKTGDPVAQQRATLEMQALYSKAGVKIMRDMIVPAVVQVPVAIGMFFAT 240 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 ++ + + + + DL ADPT I PI + + + Sbjct: 241 KRMCELPVAQLKDSGFSLLPDLTVADPTM-------------------ILPIALCAVVNV 281 Query: 504 QMKM-----SPPPADKGQAMI--LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q+ + + + + V+ +F + S P+GL + +++++ VQ ++ Sbjct: 282 QISLGGKDINAKDVPDMGHYMNCFRGLSVLGMFFMHSLPSGLFVAMLTTSILTGVQSVIL 341 Query: 557 MK 558 K Sbjct: 342 RK 343 >gi|146321575|ref|YP_001201286.1| preprotein translocase subunit YidC [Streptococcus suis 98HAH33] gi|145692381|gb|ABP92886.1| Preprotein translocase subunit YidC [Streptococcus suis 98HAH33] Length = 83 Score = 53.5 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 19/45 (42%), Gaps = 2/45 (4%) Query: 532 SSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 PAG+ +YW + I+QQA+ + + ++ F Sbjct: 1 MGLPAGVTLYWVVGGLFGILQQAITN--FILKPRIRKQVEEEFKN 43 >gi|315503883|ref|YP_004082770.1| membrane protein insertase, yidc/oxa1 family [Micromonospora sp. L5] gi|315410502|gb|ADU08619.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora sp. L5] Length = 248 Score = 53.5 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 77/214 (35%), Gaps = 24/214 (11%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L TV V+LL PL Q + P++ EL+ ++ P LQ + LY+ Sbjct: 38 IVLFTVAVRLLISPLTVAQVRGERRRTALAPEVRELQRRYADDPA-RLQSELFALYRNAG 96 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +P+AGC P LLQ P F +Y+ + + + AP + Sbjct: 97 ASPVAGCLPALLQAPFFLVMYR-LFATGD--GAPELLGERLAGVP-----LGWHLGDGLA 148 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKM-------------SPP--PADKGQAMILNWMPVVFV 528 P + G+ + + + +P P +L +P V Sbjct: 149 GPVPLVFGVLLAALLALAWWSSRRMRRASAATGTVAGTPAEGPGAAVLGRVLPLLPYGTV 208 Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P ++Y + + ++Q V+ + A Sbjct: 209 LVALVVPLAAVLYLVTTTAWTALEQVVLRRPQPA 242 >gi|329768493|ref|ZP_08259982.1| hypothetical protein HMPREF0428_01679 [Gemella haemolysans M341] gi|328836721|gb|EGF86376.1| hypothetical protein HMPREF0428_01679 [Gemella haemolysans M341] Length = 293 Score = 53.5 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 74/201 (36%), Gaps = 8/201 (3%) Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQK-AMIQLYKTHNINP--LAGCWPILLQIP 438 ++ + ++ E+ K Q + + ++YK ++ +P PIL+Q P Sbjct: 94 VQEKIKQLRESEKRVFSNDERMKIRMEQAELQREIFKIYKKYDCSPAIFGNLIPILIQAP 153 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 +Y + + + ++ ++ + + I + + + + G + +M Sbjct: 154 FVTGLYFTLQNPIYSKDILNSSFLS-ISLGEKSYIILILVFIVYMVVGKISQS----MMQ 208 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMK 558 + Q ++ P++ F + A + IY+ S ++ I Q ++ K Sbjct: 209 ANPMAQTNPEAERMQNMSKNMVWITPIMLTFITYTSIAAIGIYFIVSGILVIFQISLGRK 268 Query: 559 MHGAEIGLIDRLRSTFSKNYN 579 ++ I + ++S Sbjct: 269 LYPPYIPKLTTIKSKKVTKNK 289 >gi|325990152|ref|YP_004249851.1| membrane protein OxaA [Mycoplasma suis KI3806] gi|323575237|emb|CBZ40902.1| Membrane protein OxaA [Mycoplasma suis] Length = 341 Score = 53.5 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 37/333 (11%), Positives = 99/333 (29%), Gaps = 28/333 (8%) Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAG---AKEFPTIHHYEKDLAI 327 F S F A + ++ F + + Sbjct: 7 FQSMFTSYVFHSNEAGVGLEAAYHSGSSQRTNDLRYDAFPWTPNPWAYWPLVSSGNGFGP 66 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMS--YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 ++ + + F + N +I++ + +K + F + Sbjct: 67 FIMWLVYPFTRVFLYLIWTFRGTQDSFMDKSGLNVVCSILIILLVMKSIVFLTIFRAQYY 126 Query: 386 TANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN---------PLAGCWPILLQ 436 + + + ++ ++ K+ + + + + ++ P + + Sbjct: 127 SDLQQRHKKNLERIKSKYTTDKFDRKELRTMSVLRQQEVSRYCKKHGLKPFSALENFFIN 186 Query: 437 IPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 P+F IYK+++I+ ++ + +G I + IFT F + + F + I + Sbjct: 187 TPIFLVIYKLMTITRPVKFSKLFG-IMPFSKTPINMIFTDFLSVGWVYILFFAIAIPVNL 245 Query: 497 MS--LSMFIQMKMSPPPADK-----------GQAMILNWMPVVFVFALSSFPAGLIIYWS 543 S + + K P D + N + V + + L +Y+ Sbjct: 246 YSQKIPSRLMKKRFPSLQDDVSLKVKDINVLSSKKLQNIISVSLIIFSLFWSTSLAVYYF 305 Query: 544 WSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSK 576 ++++ +I +I + L Sbjct: 306 FNSLFNIAFSYIIHSILKKRKEKESALTKKLKN 338 >gi|307329913|ref|ZP_07609066.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces violaceusniger Tu 4113] gi|306884404|gb|EFN15437.1| membrane protein insertase, YidC/Oxa1 family [Streptomyces violaceusniger Tu 4113] Length = 220 Score = 53.5 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 10/153 (6%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ V+ PLA+ + PK+ EL K K P+ L++AM +L Sbjct: 31 IVLFTLCVRAALHPLARAAVRGEKARAALAPKLTELSRKHKG-DPERLRRAMAELRAKEG 89 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +PLAGC P L Q+PVFF +Y V S A A + +G Sbjct: 90 ASPLAGCLPALAQLPVFFVMYHVFST---GSGAGDLLDHTLAGAP----LGARWGGALSG 142 Query: 484 LPGFMHVGIWPIIMSLSMF--IQMKMSPPPADK 514 PG +H+G++ +I +++ + ++ + + P Sbjct: 143 APGLVHLGLFALIAAVATWTYLRARRTTAPGAP 175 >gi|62858651|ref|NP_001016333.1| COX18 cytochrome c oxidase assembly homolog [Xenopus (Silurana) tropicalis] Length = 381 Score = 53.5 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 34/272 (12%), Positives = 75/272 (27%), Gaps = 57/272 (20%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + F + ML+S + I+ TV ++ Sbjct: 87 LSAASTGNTGSAFGWYESLADTAPVNLAESMLISLHETSGMPWWANIICATVSLRTTITL 146 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSP-------------------PQVLQKAMIQL 418 + + K + + L++ + L Sbjct: 147 PLSVYQMYILAKVENLQPEIDALAKQLRYEVSVYGKQHGWTDKVARFQFRKNLRRIISGL 206 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH-------------------APFW 459 Y N +P I +QIP++ +S+ +R+ Sbjct: 207 YVRDNCHPFKASLLIWIQIPMWI------FVSIALRNISLNRADSATGDAVQKQLTEGGL 260 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 W DL D T I + +G+ ++ + +F K+ K Sbjct: 261 LWFPDLTMPDSTWILP------------VTLGLLNLL-IVEIFALRKIELSRFQKIITNF 307 Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + + + + S+ P+ + +YW S+ + + Sbjct: 308 IRAVSIAMIPIASTVPSSMALYWVTSSCVGLA 339 >gi|332016649|gb|EGI57514.1| Mitochondrial inner membrane protein COX18 [Acromyrmex echinatior] Length = 297 Score = 53.5 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 35/257 (13%), Positives = 75/257 (29%), Gaps = 35/257 (13%) Query: 329 RFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL---------- 378 +F + K + ++ G ++++ T + L Sbjct: 2 QFNGIFKAISESAPIKITQDFLLLVHDYTGLPWWSVIVLTTIMMRTAVTLPLSLYQLYIL 61 Query: 379 ---------AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI-QLYKTHNINPLA 428 + N +K+ + +L N +P Sbjct: 62 AKLENLKYEMDEIVKEMKKEINYGIHKYNWSKKYAKRLYNHSVAKQWNKLIVRENCHPAK 121 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 L+Q+P++ ++ S+ +R+ + +D A F G L Sbjct: 122 TSLLALIQVPLWISL------SMSIRNLCYMLPKQDANAYITYQEFITDGFLWMSNLTTA 175 Query: 489 HVGIWPIIMSLSMFI------QMKMSPPPADKGQAMILNW---MPVVFVFALSSFPAGLI 539 + PI M L K+ K Q + N+ + + S P+ L Sbjct: 176 DPFVLPISMGLFNLAIIEITCMSKVQNVELTKWQRYLTNFCRIATIGMIPIAMSVPSCLS 235 Query: 540 IYWSWSNVISIVQQAVI 556 +YW+ S+ + Q ++ Sbjct: 236 LYWATSSAFGLFQNLIL 252 >gi|221185888|gb|ACM07437.1| mitochondrial translocase [Chlamydomonas reinhardtii] Length = 449 Score = 53.5 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 100/344 (29%), Gaps = 44/344 (12%) Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 D S S ++W S + + S + + + + Sbjct: 45 DQRGSGGSWQQHQHAWGSSSHRTFFSFARKKPDAGAVAAASTGDETSISGSEPVADPTPV 104 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKD-LAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 P + + A+ R ++ +F A + + Sbjct: 105 GPP----EFFPLPESAPDAIEVASAIHQACSALERASIMSAKADAFFSASWCISGLQAVH 160 Query: 355 NLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK 413 +L+ + ++I + + ++LL FPL +A M + ++ + + Q+ Sbjct: 161 DLLDTPWFLSIAIFNITLRLLTFPLMVVAQKGSAKMMEFNHNLIHAKKLQEAAMKATSQE 220 Query: 414 AMIQLY------------------KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 +L+ KT + P + + +F + K+++ + Sbjct: 221 EHQRLFQAFRNEYNVQTAKHGDPVKTALVVPGVMILNGAIFLSIFNGVSKLMAAKVPSLT 280 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 W DL + DP L + + + P P D+ Sbjct: 281 TGGALWFSDLTSPDPYFGLPLMCTAVTLAMVEYGIN----LAGDA-------GPMPEDR- 328 Query: 516 QAMI-------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 A + + M +F+ A AG + W + +VQ Sbjct: 329 -AKMTNGLKNFMRVMAFMFIPAGGYVAAGTAVLWVSNTAFGVVQ 371 >gi|242011303|ref|XP_002426393.1| cytochrome oxidase biogenesis protein, putative [Pediculus humanus corporis] gi|212510480|gb|EEB13655.1| cytochrome oxidase biogenesis protein, putative [Pediculus humanus corporis] Length = 361 Score = 53.1 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 82/280 (29%), Gaps = 38/280 (13%) Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF-EMLIDWGWFYFIAKPMFMLMSYFY 354 ++ ++ F + +AI F L D + ++ + + Sbjct: 55 FQQSRNFSSEYFQELNTNIHNFVTTNAPTVAIKNFLIELHDMSGLPWWSEILLVTAGMKL 114 Query: 355 NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA 414 + G+ + L + + + + + K +++ + Sbjct: 115 VIGLPIGVFQQHIIAKINLTKMQHSIICKKLESELSLMARRGKWSDMKKQRAFITQQKMI 174 Query: 415 MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE----------MRHAPFWGWIKD 464 L +N +P +P + + I E W + Sbjct: 175 WSDLVVKNNCHPFKLVILTWAHLPPWILLSFSIRSLCEKDLVSPMTYLQLQTEGLFWNSN 234 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSP-----PPAD---KGQ 516 L DP I P+ + LS ++ + P K Sbjct: 235 LIQPDPYF-------------------ILPVTLFLSTYLFQDLIQLSIGRKPTSFFLKVF 275 Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + I + V+F+ + P+GL +YWS S + SI Q ++ Sbjct: 276 STIFRFSAVLFLIVGAIVPSGLSLYWSVSILCSIAQHLLL 315 >gi|294886793|ref|XP_002771856.1| cytochrome oxidase biogenesis protein, putative [Perkinsus marinus ATCC 50983] gi|239875656|gb|EER03672.1| cytochrome oxidase biogenesis protein, putative [Perkinsus marinus ATCC 50983] Length = 420 Score = 53.1 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 104/301 (34%), Gaps = 62/301 (20%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIA--IMLTTVFVKLLF 375 + D A R L Y M L+ ++ + I + V+++ Sbjct: 75 LMERCVDEAHARGAELASSYDPYLPVDLMQSLIITIHDYMPGHSWMASIAVAATVVRIMV 134 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN--------INPL 427 PL + + I P++D L + K++ + Q+ +I+ ++ + + Sbjct: 135 LPLLISSMRAGRIKQRIMPQLDALSAEMKEAEKKGSQQQLIRAQTKYSQFIKEHGSMVTM 194 Query: 428 AGCWPILLQIPVF----FAIYKVISISLEMRHAPF--WGWIKDLAAADPTNIFTLFGILP 481 G + +QIP+F ++ ++ + + P W+ LA +DP Sbjct: 195 KGMMGMFVQIPIFTTAFLSMRQMSNHPHIFKGFPMETPLWLDSLALSDP----------- 243 Query: 482 FYLPGFMHVGIWPIIMSLSM-----FIQMKMSPPPADK------------GQAMILNW-- 522 + + P++ S + F S A+ Q + + Sbjct: 244 --------IIVLPVLASALLLTNIEFFGSLDSAQAAEAGDRPDTKNKLGIDQKTMQKYSR 295 Query: 523 -----MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE--IGLIDRLRSTFS 575 + V+ + A PAGL +Y + + +I Q I+++ E + + ++ Sbjct: 296 HGFRALCVIALPATMYLPAGLFVYTCTNALWAITQNR-ILRLPIVEQALNIPHNIKKEEK 354 Query: 576 K 576 K Sbjct: 355 K 355 >gi|284031357|ref|YP_003381288.1| 60 kDa inner membrane insertion protein [Kribbella flavida DSM 17836] gi|283810650|gb|ADB32489.1| 60 kDa inner membrane insertion protein [Kribbella flavida DSM 17836] Length = 225 Score = 53.1 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 77/211 (36%), Gaps = 7/211 (3%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 +P F G ++ ++ + +AI++ T+ V+LL PL+ Sbjct: 1 MPSFLDAPVSGAYHLVSWLATTIEPLGGPYA--AALAIVVCTIAVRLLLLPLSLAAVRGE 58 Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 + + P+I E+ + +P + Q+ + +L AGC P+ Q+P F+ +Y + Sbjct: 59 KSRSVLMPQIQEISRRHAGNPERA-QREIAKLQAESGTTLFAGCLPMFAQLPFFWVLYSL 117 Query: 447 ISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMK 506 S ++ + A + + LF P Y+ + ++ S Q+ Sbjct: 118 FSRTVVAGESNHLLAGTLFGAPLGVH-WPLFASTPAYVG---LAVLLAVVACFSARRQLA 173 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 A + +P + + P Sbjct: 174 RLHETATPMSRNLARLLPFGTLVTAAFIPLA 204 >gi|213627320|gb|AAI71112.1| hypothetical protein LOC549087 [Xenopus (Silurana) tropicalis] Length = 381 Score = 53.1 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 35/275 (12%), Positives = 79/275 (28%), Gaps = 63/275 (22%) Query: 318 IHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFP 377 + F + +L+S + I+ TV ++ Sbjct: 87 LSAASTGNTGSAFGWYESLADTAPVNLAESLLISLHETSGMPWWANIVCATVALRTTVTL 146 Query: 378 LAKKQYVSTANMKNIQPKIDELREKFKQSP-------------------PQVLQKAMIQL 418 + + K + + L++ + L Sbjct: 147 PLSVYQMYILAKVENLQPEIDALAKQLRYEVSVYGKQHGWTDKVARFQFRKNLRRIISGL 206 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH-------------------APFW 459 Y N +P I +QIP++ +S+ +R+ Sbjct: 207 YVRDNCHPFKASLLIWIQIPMWI------FVSIALRNISLNRADSATGDAVQKQLTEGGL 260 Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 W DL D T I + +G+ ++ + +F K+ + Q +I Sbjct: 261 LWFPDLTMPDSTWILP------------VTLGLLNLL-IVEIFALRKI---ELSRFQKII 304 Query: 520 LNWM---PVVFVFALSSFPAGLIIYWSWSNVISIV 551 N++ + + S+ P+ + +YW S+ + + Sbjct: 305 TNFIRAVSIAMIPIASTVPSSMALYWVTSSCVGLA 339 >gi|255023194|ref|ZP_05295180.1| OxaA-like protein precursor [Listeria monocytogenes FSL J1-208] Length = 191 Score = 52.7 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 11/140 (7%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ----- 393 Y + +M + N+G+AI++TT+ ++ L PL + + M++ Sbjct: 36 TYLVQPFTSFIMFVASFVGDNYGVAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKP 95 Query: 394 ---PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL-AGCWPILLQIPVFFAIYKVISI 449 L+ + +QK M+ +Y +NINP+ GC P+L+Q+P+ A Y I Sbjct: 96 EIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRG 155 Query: 450 SLEMRHAPFWGWIKDLAAAD 469 S E+ + + W +L ++D Sbjct: 156 SSEIA-SHTFLWF-NLGSSD 173 >gi|113478085|ref|YP_724146.1| putative inner membrane protein translocase component YidC [Trichodesmium erythraeum IMS101] gi|110169133|gb|ABG53673.1| 60 kDa inner membrane insertion protein [Trichodesmium erythraeum IMS101] Length = 382 Score = 52.7 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 68/208 (32%), Gaps = 12/208 (5%) Query: 381 KQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 + + + + + + Q+ +++ Y I PL ++ + Sbjct: 159 HYQILALSPNGDKLIVGDKTKVEFQTVEGKSLNTLMEEYNQSEIKPLWTVTKGAERVQID 218 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH--VGIWPIIMS 498 V E I + I L + F G +H + I I Sbjct: 219 QDGSLVALEPGEATIQGTIPGIA--SNKGFLFIKALGRVGAFDENGNIHWDILIMVIGFG 276 Query: 499 LSMFIQMKMSPP-----PADKGQAMILNWMPVVF--VFALSSFPAGLIIYWSWSNVISIV 551 +S++ +S A+ Q I P++F +F + PAG+++Y +N+ + Sbjct: 277 VSIYASQTISGKGPGANNANPNQDSINKITPILFSGIFLFTPLPAGVLLYMLIANIFQTI 336 Query: 552 QQAVIMKMHGAEIGLIDRLRSTFSKNYN 579 Q A I+ L + + K Sbjct: 337 Q-AYILSKEPLPENLQKLVEESQPKTTK 363 >gi|126330826|ref|XP_001375072.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 386 Score = 52.7 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 64/234 (27%), Gaps = 50/234 (21%) Query: 344 KPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKF 403 M + + +I++TT ++ ++ K Sbjct: 119 WAEAMFLGAQGATGLPWWASIVVTTAALRSAVTLPLAVYQHYILAKVENLQPEIKIIAKN 178 Query: 404 KQSPPQVLQKA-------------------MIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 K + +LY N +P + +QIP++ + Sbjct: 179 LNYDIAFRAKQLGWSKRVTRLTYLNNMRRIVSELYIRDNCHPFKATLLVWIQIPMWVFMS 238 Query: 445 KVISISL------------EMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 + E W DL D T I + +GI Sbjct: 239 VALRNFSLGITDSEGFSIQEQFSTGGVLWFPDLTLLDSTWILP------------VSLGI 286 Query: 493 WPIIMSLSMFIQMKMSPPPADKGQAMILNW---MPVVFVFALSSFPAGLIIYWS 543 ++ + +F K+ Q I + + V+ + ++ P+ + +YW Sbjct: 287 LNLL-IVEIFALQKLEMSR---FQKYITYFTRGISVLMIPIAATVPSAIALYWF 336 >gi|326472840|gb|EGD96849.1| hypothetical protein TESG_04277 [Trichophyton tonsurans CBS 112818] Length = 305 Score = 52.3 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 68/206 (33%), Gaps = 73/206 (35%) Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH------------ 455 Q + +LYK I P A IL Q+PV+ A+ + + + M Sbjct: 99 QQDFKMKRKELYKRWKIRPWASYASIL-QLPVWLAMMESLRRMVGMSGGLLSIIQSWIES 157 Query: 456 ----APFW-----------GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 AP W DL ADPT+ P++++ + Sbjct: 158 KVDGAPIIEVEPSMATEGALWFTDLLIADPTH-------------------ALPVVLAAT 198 Query: 501 MFIQMK-----MSPPPADKGQ-------------AMILNWM-----PVVFVFALSSFPAG 537 MF + S K Q +L + PV+ S PAG Sbjct: 199 MFTNVTWGWKVKSAAEISKLQRSEAIRERAFKTLKRVLQGLSIWLAPVM---IYSQAPAG 255 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAE 563 L+IYW S+ + Q ++ ++ + Sbjct: 256 LLIYWISSSTFATAQTQIVRRVMRTK 281 >gi|294659963|ref|XP_002770675.1| DEHA2G20064p [Debaryomyces hansenii CBS767] gi|199434365|emb|CAR66007.1| DEHA2G20064p [Debaryomyces hansenii] Length = 341 Score = 52.3 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 60/200 (30%), Gaps = 28/200 (14%) Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE- 452 P E+ + +K L+K H++ QIP++ + + Sbjct: 137 PVATMKYEEILLLATKETRKRQKALFKKHDVQLWKNIILPAFQIPLWVCMSWTMRDLSGW 196 Query: 453 -----MRHAP--------FWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 + + P W DL DP +IF L + + Sbjct: 197 SSWDSLANKPLDSSLYTEGLFWFTDLTTLDPMHIFPLILGVISLCNVEWTFKTLEL---- 252 Query: 500 SMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI--- 556 S F + ++ P + + V + + P L +YW S V S++Q ++ Sbjct: 253 SRFTRKRLGRPTLTDSMSSVARMSVVFMMAISLNAPVALTLYWLSSQVYSLIQNIILDLM 312 Query: 557 -------MKMHGAEIGLIDR 569 K G + Sbjct: 313 IPISFTPNKRFGYKTSSKSN 332 >gi|242223592|ref|XP_002477400.1| predicted protein [Postia placenta Mad-698-R] gi|220723056|gb|EED77400.1| predicted protein [Postia placenta Mad-698-R] Length = 228 Score = 52.3 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 79/191 (41%), Gaps = 29/191 (15%) Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV----F 440 T + +++ K+ ++ Q + +Y+ ++ + ++Q+PV F Sbjct: 4 YTDEINDLRDKMQTAQKTRDMLTLQSVAMKQRMIYEKAGVSMVGMAILPIVQLPVTLGMF 63 Query: 441 FAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 F + K+ LE ++ DL ADPT GI P++ +++ Sbjct: 64 FGVKKLCDFPLEQLKHSGVSFLPDLTLADPT-------------------GILPVVSAVA 104 Query: 501 MFIQMKM---SPPPADKGQAMI--LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAV 555 M IQ+ + A MI + +V + + + P+G+++Y S++ ++ Q+V Sbjct: 105 MNIQLTLGARDMVTAPHMAHMINFFRVLSLVGIPLMWNLPSGVLVY-VISSITAMSIQSV 163 Query: 556 IMKMHGAEIGL 566 +++ L Sbjct: 164 VLRQPAVRRAL 174 >gi|124512218|ref|XP_001349242.1| mitochondrial inner membrane translocase, putative [Plasmodium falciparum 3D7] gi|23499011|emb|CAD51091.1| mitochondrial inner membrane translocase, putative [Plasmodium falciparum 3D7] Length = 589 Score = 52.3 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 81/242 (33%), Gaps = 24/242 (9%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPK 395 + +++ +L S + +I++TT+F++++ PL K + P Sbjct: 302 YENTWYVKLIYDLLNSTKLFFDCTWMSSIIMTTLFMRIIILPLTISSERDRRKQKILSPL 361 Query: 396 IDELREKFKQSPPQVLQKAMIQLYKTH---------NINPLAGCWPILLQIPVFFAIYKV 446 + EL +K K + K ++ K ++ P + Q P+FF Y Sbjct: 362 LKELTKKLKDNAQDGNIKKAVEFKKKILNIRNTHGISLIPKSIILMAFFQTPLFFIFYFS 421 Query: 447 I------SISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + + W+ L+ DP I + L + + I I Sbjct: 422 MKRIASYPDIFKDFTFESPLWLDSLSLPDPYYILPILSSLLLLSNNELTLLIDKKIN--E 479 Query: 501 MFIQMKMSPPPADKGQAMI-------LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 Q ++ + Q + + + V S P+GL IY+ + + Sbjct: 480 NNKQSNLNNQEETEFQKNMKKITKLAMRLFYLSSVLFFKSMPSGLFIYFITNTFFQLFIT 539 Query: 554 AV 555 + Sbjct: 540 QI 541 >gi|313112582|ref|ZP_07798243.1| inner membrane protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310625104|gb|EFQ08398.1| inner membrane protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 137 Score = 52.3 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 +FY ++ P+ +M + Y L+ ++G I++ T+ + ++ PL Q S A M Q Sbjct: 3 KGMNFFYILSGPLGYVMEWIYKLLPSYGWDIIIFTLLINIVKIPLQLSQQKSMAKMSAFQ 62 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 P + E++ K+K P+ Q+ M++L + + NP AGC P+LL V F + V+ LE Sbjct: 63 PMMMEIQTKYKD-KPEKQQEEMLKLQQDYGYNPTAGCVPMLLNFLVMFGVIGVVYNPLE 120 >gi|295659171|ref|XP_002790144.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226281849|gb|EEH37415.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 360 Score = 51.9 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 47/147 (31%), Gaps = 22/147 (14%) Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 G IL Q A + + + + W DL A+DP + + Sbjct: 197 GLLVILQQWISPDAAKAQVPVEPSLSTEGAF-WFPDLVASDPLYVLPFAISALMFTHITW 255 Query: 489 HVGI-----WPIIM------SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 I PI+ + + ++ QAM + P S P+ Sbjct: 256 GSKICKAKELPILASQGNLQGIFSWAIQRIF-------QAMSIWIAP---ALMYSEAPSA 305 Query: 538 LIIYWSWSNVISIVQQAVIMKMHGAEI 564 L IYW + ++I+Q ++ K Sbjct: 306 LGIYWLTTTSVAIIQSRLLKKFMPFPT 332 >gi|154308874|ref|XP_001553772.1| hypothetical protein BC1G_07965 [Botryotinia fuckeliana B05.10] gi|150852591|gb|EDN27783.1| hypothetical protein BC1G_07965 [Botryotinia fuckeliana B05.10] Length = 330 Score = 51.9 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 41/154 (26%) Query: 400 REKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF- 458 ++ + + + + ++YK I+ P +QI + + +K+ +R Sbjct: 61 EKEGDTAEMMLHRAELQRIYKRAGISMWKSFVPA-VQIFIGYGTWKL------LRQMSDV 113 Query: 459 ---------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII-----MSLSMFIQ 504 W +L+ DP +LP G +H ++ +S Sbjct: 114 PVPGLLDGGILWFYNLSIPDPYF------LLPLATSGILHY----VLKKGGETGVST--- 160 Query: 505 MKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 ++P Q MP++ + S PA + Sbjct: 161 --LTPGMVTAMQ----WGMPLLSMIFTSFMPAAV 188 >gi|271961730|ref|YP_003335926.1| inner membrane protein translocase component YidC [Streptosporangium roseum DSM 43021] gi|270504905|gb|ACZ83183.1| putative inner membrane protein translocase component YidC [Streptosporangium roseum DSM 43021] Length = 231 Score = 51.9 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 1/123 (0%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 F + + L++ +G+ +AI+L T+ V+LL PL+ Q + P++ Sbjct: 1 MFDPVIEFTADLITALAQPLGSTALAIVLFTLGVRLLLLPLSVMQARGERVRARLAPEVQ 60 Query: 398 ELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 ELR + P+ L + + LY +PLAGC P Q+P F +Y+V + S+ HA Sbjct: 61 ELRRRH-GRDPERLHRELTALYAGEKASPLAGCLPGFAQMPFFMLMYQVFASSVIAGHAN 119 Query: 458 FWG 460 Sbjct: 120 ALL 122 >gi|6166302|gb|AAF04771.1|AF104228_1 stage III sporulation protein J homolog [Listeria monocytogenes] Length = 88 Score = 51.5 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Query: 384 VSTANMKNIQPKIDELREKF---KQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF 440 S M N+QPKI EL+EK+ Q LQ+ ++LY+ +++NP+ GC P+L+Q+P+ Sbjct: 4 KSQKAMTNLQPKIKELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPIL 63 Query: 441 FAIYKVISISLEMRHAPFWGWIK 463 Y+ IS + E++ + W++ Sbjct: 64 LGFYQAISRTAEIKTDS-FLWMQ 85 >gi|328479692|gb|EGF48851.1| preprotein translocase YidC [Lactobacillus rhamnosus MTCC 5462] Length = 208 Score = 51.5 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 17/171 (9%) Query: 337 GWFYFIAKPMFMLMSYFYNLV---GNFGIAIMLTTVFVKLLFFPLAKKQYV----STANM 389 ++ I P+ LM + V ++GIAI++ T+ V+L+ PL +Q Sbjct: 30 TFYKIIGLPLQHLMEWIAGFVGSTSSYGIAIIVITLLVRLIVLPLMLRQQRTTTAYQEKQ 89 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKT------HNINPLAGCWPILLQIPVFFAI 443 K +QP++ +++ K++ Q A + ++ P GC P+L+Q P+F + Sbjct: 90 KILQPQLKIVQDAVKRAKTPEQQMAANNYMRKIYSANGTSMIPSMGCLPMLIQFPIFSGL 149 Query: 444 YKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP 494 Y+ I+ S E+ HA F+G + + I T+ LP+ + + + P Sbjct: 150 YQAIAYSPEISHATFFG----IQLGHSSFIVTILATLPYIIVSLIMLQGVP 196 >gi|302521594|ref|ZP_07273936.1| membrane protein [Streptomyces sp. SPB78] gi|302430489|gb|EFL02305.1| membrane protein [Streptomyces sp. SPB78] Length = 200 Score = 51.5 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 1/87 (1%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T V+LL PL++ + P+I LR K+ ++P +Q+A+ +L+ H Sbjct: 41 IVVLTACVRLLLLPLSRTAARGQRERAGLAPEIAALRRKYAKNPE-RMQRALTELHAEHG 99 Query: 424 INPLAGCWPILLQIPVFFAIYKVISIS 450 ++PL GC P+L Q+P FF +Y V S S Sbjct: 100 VSPLGGCLPMLCQLPFFFVLYHVFSSS 126 >gi|145339114|ref|NP_190023.2| binding [Arabidopsis thaliana] gi|110742724|dbj|BAE99273.1| hypothetical protein [Arabidopsis thaliana] gi|332644376|gb|AEE77897.1| membrane insertion protein and OxaA/YidC with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] Length = 566 Score = 51.5 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 93/253 (36%), Gaps = 34/253 (13%) Query: 323 KDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT-TVFVKLLFFPLAKK 381 + ++ D + ++ +P+ L+ ++++ G ++ T TV + P+ Sbjct: 100 NGYGLEFGDLSQDLSNYDYLTQPVISLLDSYHDITGLPWWVVIATSTVAFRTALLPILIL 159 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 Q T + PK+ + ++L++ + GC P L +P +F Sbjct: 160 QRKQTKRISQFLPKLPHF---WPPQGSGRSVLDQLKLFRKERKD--IGC-PSFLWVPAYF 213 Query: 442 AIYKVISISLEMRHAPFWGWIKDL--AAADPTNIFTLFGILPFY----LPGFMHVGIWPI 495 +I + WI + + D F G L F +P ++ ++P Sbjct: 214 SIQISCF----------FLWITSIRRMSLDHHPGFDSGGALWFQNLTEIPNGLYGPLFPF 263 Query: 496 IMSLSMFIQMKMSPPPAD-----------KGQAMILNWMPVVFVFALSSFPAGLIIYWSW 544 +++ + +++ + K LN + F P G ++YW+ Sbjct: 264 LIAGLHYTNTQITFTASSVHKVDKFTELAKAYKTFLNLLTCALYFLSFQMPQGSLLYWAT 323 Query: 545 SNVISIVQQAVIM 557 + SI QQ+++ Sbjct: 324 NLSFSIAQQSILN 336 >gi|146418711|ref|XP_001485321.1| hypothetical protein PGUG_03050 [Meyerozyma guilliermondii ATCC 6260] Length = 330 Score = 51.5 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 32/169 (18%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------- 459 + +K L+K H + +QIP++ + SL MR+ W Sbjct: 141 KETRKRQKALFKRHGVQIWKNFTLPAIQIPLWVGM------SLSMRNLSGWSTWDVLKNQ 194 Query: 460 -----------GWIKDLAAADPTNIFTL-FGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 W DL +DP ++F L G++ + I +I+S + + Sbjct: 195 ALDPSLYTEGALWFTDLTCSDPMHVFPLVLGVISLCNVEWTFKTIQLLIISRKRAFRSSL 254 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + A+ + + V + P L++YW S + S++Q ++ Sbjct: 255 TDAMANVSRMAV-----VFMMAISLHAPVSLVLYWFSSQLFSLIQNIIM 298 >gi|224103345|ref|XP_002313020.1| inner membrane protein [Populus trichocarpa] gi|222849428|gb|EEE86975.1| inner membrane protein [Populus trichocarpa] Length = 499 Score = 51.5 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 74/246 (30%), Gaps = 35/246 (14%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 M L+ +++L G I+ ++ L + + Sbjct: 93 PVDSMIWLLDSYHDLTGLPWWIIIASSTLAMRLTLFPLHVLQMHKIKKISRSFSKLPPLF 152 Query: 402 KFKQSPPQVLQKAMIQLYKTHNI---NPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 S +++ + + I + L + +QIP F I + + P Sbjct: 153 PPPLSGRSYIEQISLFRNERRAIGCPSYLWFLAFLSVQIPCFLLWMTSIRRMC-LDNHPG 211 Query: 459 W-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + W ++L + +F PF + G V + + + ++ Sbjct: 212 FDCGGALWFQNLTELPHGVLGPIF---PFLIAGLHGVNV--------HYYRKYLN----- 255 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 +P+ F P G ++YW ++ ++ +QQ + + L Sbjct: 256 ------FMMLPLFF--IGYCIPQGSLVYWVTNSSLTAIQQVSL--KLPVVRAKLGLLDKD 305 Query: 574 FSKNYN 579 F K Sbjct: 306 FPKAPA 311 >gi|150863808|ref|XP_001382409.2| COX18; cytochrome c oxidase assembly protein [Scheffersomyces stipitis CBS 6054] gi|149385064|gb|ABN64380.2| COX18; cytochrome c oxidase assembly protein [Scheffersomyces stipitis CBS 6054] Length = 305 Score = 51.1 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 20/164 (12%) Query: 408 PQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI------------YKVISISL--EM 453 + +K L+K +N+ Q+P++ ++ + + E Sbjct: 115 TKETRKRQKALFKKNNVQLWKNMILPAFQVPLWVSMSLTMRDLSGWTSWDSLPNKPLDEA 174 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 ++ W DL + D ++F L + + L+M + ++ P D Sbjct: 175 LYSEGLFWFTDLTSFDQLHVFPLLVGITALCNVEWTFKTLE-LSRLTM--KKRLRPTLTD 231 Query: 514 KGQAMILNWMPVVFVF-ALSSFPAGLIIYWSWSNVISIVQQAVI 556 L+ M VVF+ + P+ L +YW S + S+VQ ++ Sbjct: 232 AISN--LSRMTVVFMMAISLNAPSALTLYWLSSQMYSLVQNVIL 273 >gi|315126468|ref|YP_004068471.1| hypothetical protein PSM_A1387 [Pseudoalteromonas sp. SM9913] gi|315014982|gb|ADT68320.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913] Length = 216 Score = 51.1 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 82/213 (38%), Gaps = 31/213 (14%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPL----AKKQYVSTANMKNI 392 W F A + ++ + + + +AI+L TV +L+ P+ + + + Sbjct: 3 IWNLFTAFIVQLITFFTQEVGVSQAVAIILFTVIGRLVLMPINLVAMVNMVRNKKAIAAL 62 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVISIS 450 +P++D ++ +K P + K + LYK HNI + + Q ++ + Sbjct: 63 KPELDSIKSNYKDQPS-EIAKLTMALYKKHNIKFIDKKSVINMASQGVFGLGTFQALQQI 121 Query: 451 LEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP 510 + + WI +A D +++ ++ M M P Sbjct: 122 VL---NSKFAWITSIAKPD---------------------IAISLLVGAITYLSMMMMPG 157 Query: 511 PADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 A++ ++ ++ V L +FP+ + +YW+ Sbjct: 158 SAEQTSTLLFLIPAIICVVTLVNFPSAIGLYWA 190 >gi|302869633|ref|YP_003838270.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora aurantiaca ATCC 27029] gi|302572492|gb|ADL48694.1| membrane protein insertase, YidC/Oxa1 family [Micromonospora aurantiaca ATCC 27029] Length = 248 Score = 51.1 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 16/210 (7%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L TV V+LL PL Q + P++ EL+ ++ P LQ + LY+ Sbjct: 38 IVLFTVAVRLLISPLTVAQVRGERRRTALAPEVRELQRRYADDPA-RLQSELFALYRNAG 96 Query: 424 INPLAGCWPILLQIPVFFAIYKVIS---ISLEMRHA-----PFWGWIKD-LAAADPTNIF 474 +P+AGC P LLQ P F +Y++ + + E+ P + D LA P Sbjct: 97 ASPVAGCLPALLQAPFFLVMYRLFATGDGAPELLGERLAGVPLGWHLGDGLAGPVPL--- 153 Query: 475 TLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPP--PADKGQAMILNWMPVVFVFALS 532 +FG+L L + + + + +P P +L +P V Sbjct: 154 -VFGVLLAALLALAWWSSRRMRRAAAATGTVAGTPAEGPGAAVLGRVLPLLPYGTVLVAL 212 Query: 533 SFPAGLIIYWSWSNVISIVQQAVIMKMHGA 562 P ++Y + + ++Q V+ + A Sbjct: 213 VVPLAAVLYLVTTTAWTALEQVVLRRPQPA 242 >gi|218675211|ref|ZP_03524880.1| putative inner membrane protein translocase component YidC [Rhizobium etli GR56] Length = 42 Score = 51.1 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 21/42 (50%), Positives = 27/42 (64%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQT 42 ME N NYF+AIALSV+IV WQ Y+ PRIE ++ + Sbjct: 1 MENNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKA 42 >gi|218134371|ref|ZP_03463175.1| hypothetical protein BACPEC_02265 [Bacteroides pectinophilus ATCC 43243] gi|217989756|gb|EEC55767.1| hypothetical protein BACPEC_02265 [Bacteroides pectinophilus ATCC 43243] Length = 162 Score = 50.8 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 4/107 (3%) Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 ++ + + N G+AI++ T KLL PL KQ T +QP++ +++K+K + Sbjct: 25 WLFLGLDAIGIPNIGLAIIIFTFVTKLLMMPLTVKQMKFTKLSTVMQPELQAIQKKYKNT 84 Query: 407 PPQ----VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 Q +Q+ +Y + +P GC +L+Q P+ A+Y++I Sbjct: 85 KDQNEMLKMQEETKAVYAKYGTSPTGGCAQLLIQFPILLALYRIIQN 131 >gi|70953250|ref|XP_745738.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56526155|emb|CAH77908.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 352 Score = 50.8 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 77/242 (31%), Gaps = 33/242 (13%) Query: 335 DWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQP 394 + ++ +L S L ++ ++I+ TT F++L+ PL + + P Sbjct: 69 PYENSWYFNIVYELLNSTKILLDCSWLVSIIATTTFLRLIILPLTISAERDLIKQQILNP 128 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTH---------NINPLAGCWPILLQIPVFFAIYK 445 I E K K K ++ ++ P + I ++ P+F Y Sbjct: 129 VITEFTNKLKTHAQSGNIKTALEYKTKILNIRDTHGISLIPTSIILXIFMRTPLFVIFYF 188 Query: 446 V---ISISLEMRHAPFW---GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSL 499 I+ E+ + W+ L+ DP I + L + I I Sbjct: 189 SMKKIASYPEIFKEFTFESPLWLDSLSLPDPYCILPILSSLLLLSNHELTSLIDKHIA-- 246 Query: 500 SMFIQMKMSPPPADKG---QAMI-------LNWMPVVFVFALSSFPAGLIIYWSWSNVIS 549 +P D Q I + + S P+GL IY+ + Sbjct: 247 ------NNNPNKYDDESEFQKNIKKISKIAMRAFYISSALFFKSMPSGLFIYFITNTFFQ 300 Query: 550 IV 551 + Sbjct: 301 LF 302 >gi|225431027|ref|XP_002273357.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297735304|emb|CBI17666.3| unnamed protein product [Vitis vinifera] Length = 572 Score = 50.4 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 88/237 (37%), Gaps = 41/237 (17%) Query: 342 IAKPMFMLMSYFYNLV-GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELR 400 + + L+ ++++ + I I +T+ +++ FP+ Q + + PK+ Sbjct: 103 PVRFLVSLLDGYHDVTGWPWWIIIASSTLALRIALFPILVLQLKKMKRIAELLPKLPPPL 162 Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINP--LAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 Q ++ + K P L + Q+P F ++ + + + H P Sbjct: 163 PPPLSGRSYFDQISLFRKEKRAIGCPSFLWFLASLSTQVPCFI-LWMMSIRWMSLDHHPG 221 Query: 459 W-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + W ++L P + I+PI++S FI +++S + Sbjct: 222 FDSGGALWFQNLTEF----------------PNGVLGPIFPILISGLHFINVQISFSTSS 265 Query: 514 KGQ--------AMILNW------MPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 GQ A + +P+ F P G ++YW ++ +S +QQ I Sbjct: 266 VGQVPGLLGLLAKYYKFYLEILTVPIFFTGFYI--PQGSLVYWVTNSSLSAIQQLTI 320 >gi|169838112|ref|ZP_02871300.1| hypothetical protein cdivTM_13613 [candidate division TM7 single-cell isolate TM7a] Length = 44 Score = 50.0 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 529 FALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 F P+G+ +Y+ S +S+VQQ I+K G D ++S+ Sbjct: 1 FIFYKMPSGVTLYYLVSGALSLVQQYFILK--GRSDDGKDNIKSS 43 >gi|270003128|gb|EEZ99575.1| hypothetical protein TcasGA2_TC001561 [Tribolium castaneum] Length = 308 Score = 50.0 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 75/259 (28%), Gaps = 70/259 (27%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGN--------FGIAIMLTTVFVKLLFFPLAKK 381 F+ + F + + Y + N + I+ TTV ++ Sbjct: 48 FDSIAKTQSGIFKSLSESAPVEYCQKFLLNVHDTTGLPWWATIICTTVMMRGCVTVPLAI 107 Query: 382 QYVSTA------------------NMKNIQPKIDELREKFKQSPPQVLQKAMIQ-LYKTH 422 I K+ EK + + + Q L + Sbjct: 108 YQNYIMAKLEFVKLEMDEIAQELKKETAIAVKMYNWDEKTARITFKRSIRKQWQGLIQRE 167 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL--FGIL 480 N +P I QIP++ ++ S+ +R+ + +D +A ++ FG + Sbjct: 168 NCHPFKTTLLIFFQIPLWISL------SVSLRNLVYMLPQQDTSAQITFTELSVGGFGWI 221 Query: 481 PFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPA--GL 538 P L + PI+ L + + Sbjct: 222 P-NLTVVDSSLVLPILFGL--------------------------------LNLAIIECV 248 Query: 539 IIYWSWSNVISIVQQAVIM 557 ++YW+ S+ VQ V++ Sbjct: 249 VLYWTTSSAFGFVQNLVLI 267 >gi|237749664|ref|ZP_04580144.1| predicted protein [Helicobacter bilis ATCC 43879] gi|229374741|gb|EEO25132.1| predicted protein [Helicobacter bilis ATCC 43879] Length = 147 Score = 50.0 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 64/141 (45%), Gaps = 5/141 (3%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + + + + + + + + N+G++I+L ++ V L + +++ Sbjct: 6 LYYIFIFPLEQVLDWAFFTLFKASKNYGVSIILLSLVVNLFLLKIFLYTDKKAQQEADLK 65 Query: 394 P----KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 +I + +K++ +A+ + +K H I L + LQIP FFA+Y++I+ Sbjct: 66 EKLDKRIKSWKSVYKRAKLYAFTQALYRQHKYHPIYALRSLGGLALQIPFFFAMYEIINK 125 Query: 450 SLEMRHAPFWGWIKDLAAADP 470 + E + + WI DL+ D Sbjct: 126 A-EYLQSVRFLWIDDLSKPDS 145 >gi|297818908|ref|XP_002877337.1| binding protein [Arabidopsis lyrata subsp. lyrata] gi|297323175|gb|EFH53596.1| binding protein [Arabidopsis lyrata subsp. lyrata] Length = 540 Score = 49.6 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 86/240 (35%), Gaps = 34/240 (14%) Query: 336 WGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLT-TVFVKLLFFPLAKKQYVSTANMKNIQP 394 + ++ +P+ L+ +++L G ++ T TV + P+ Q T + P Sbjct: 86 VSNYDYLTQPVISLLDSYHDLTGLPWWVVIATSTVAFRTALLPILILQRKQTRRISQFLP 145 Query: 395 KIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR 454 K+ + ++L++ + GC P L +P +F+I Sbjct: 146 KLPPF---WPPEGSGRSVIDQLKLFRKERRDS--GC-PSFLWVPAYFSIQISCF------ 193 Query: 455 HAPFWGWIKDL--AAADPTNIFTLFGILPFY----LPGFMHVGIWPIIMSLSMFIQMKMS 508 + WI + + D F G L F +P ++ ++P +++ + +++ Sbjct: 194 ----FLWITSIRRMSLDHHPGFDSGGALWFQNLTEVPNGLYGPLFPFLIAGLHYTNTQIT 249 Query: 509 PPPAD-------KGQAMILNWMPVVFVF----ALSSFPAGLIIYWSWSNVISIVQQAVIM 557 + A F P G ++YW+ + SI QQ+++ Sbjct: 250 FTASSVHKVDKFAELAKTFKMFLNFLTFALYGLSFQMPQGSLLYWATNLSFSIAQQSILN 309 >gi|85110762|ref|XP_963619.1| hypothetical protein NCU06778 [Neurospora crassa OR74A] gi|18376012|emb|CAB91746.2| conserved hypothetical protein [Neurospora crassa] gi|28925305|gb|EAA34383.1| predicted protein [Neurospora crassa OR74A] Length = 441 Score = 49.6 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 55/173 (31%), Gaps = 58/173 (33%) Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPLA P L + ++E W DL AADP + Sbjct: 256 VNPLANILPESLSS----YFQNTLPTTME-----GCLWFPDLMAADPLH----------- 295 Query: 484 LPGFMHVGIWPIIMSLSMFIQMK----------MSPPPAD-------------KGQ---- 516 I P ++S +MF+ + ++P D K Q Sbjct: 296 --------ILPFVLSFTMFVNVMPRNQEGWLRLLNPGTEDVNPNNIGEHASKIKQQKSVG 347 Query: 517 ---AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 L + ++ A + PA L +YW +++ S +V+ L Sbjct: 348 LRMQRALLLLTLIVGPATINLPAALHLYWITTSLTSNAITSVVAAKMPLPPYL 400 >gi|242766718|ref|XP_002341226.1| mitochondrial export translocase Oxa2, putative [Talaromyces stipitatus ATCC 10500] gi|218724422|gb|EED23839.1| mitochondrial export translocase Oxa2, putative [Talaromyces stipitatus ATCC 10500] Length = 318 Score = 49.6 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 80/242 (33%), Gaps = 32/242 (13%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + W +A ++ F LV + + + LL +Q V M+N Sbjct: 57 LPWAASIPLAAVCVRMVVAFPLLVWSRVTNRKMADIAPLLLCLRNHYQQAVKAQAMENKL 116 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 E+ ++ + LYK I+ G LLQ+PV+ A+ + + + Sbjct: 117 YMRPREAERQLRAHLKERTA---LLYKEWGISRTLGFL-PLLQLPVWLALMEGVRNIGQS 172 Query: 454 RHAPFW---------GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + P W DL A D T I L L + + Sbjct: 173 MNLPGVEPALANGGAFWFPDLLAGDTTGILPLALTLSIMANVRL---------GFTTKTF 223 Query: 505 MKMSPPPADKGQAMILN-----WMPVVFVFALSS-----FPAGLIIYWSWSNVISIVQQA 554 ++S + + ++ + V+ + PAG+++YW S + +Q Sbjct: 224 AELSDYKTPEMTRHLFLKVVKEFLTFMSVYIGFTAYMTGMPAGMMLYWIASTNTATLQSK 283 Query: 555 VI 556 + Sbjct: 284 FL 285 >gi|254467613|ref|ZP_05081022.1| 60Kd inner membrane protein [Rhodobacterales bacterium Y4I] gi|206684361|gb|EDZ44845.1| 60Kd inner membrane protein [Rhodobacterales bacterium Y4I] Length = 1344 Score = 49.2 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 76/202 (37%), Gaps = 22/202 (10%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 + + ++ ++ ++L P+A K ++ L+ K P + + A+ Sbjct: 409 HILLGLLALSIVTRILVLPVALKSERDQIITNETADEMKALKAKLAHDPVRKAR-AVQAF 467 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y + P+ LL +PV + P + W++DL A DP I + Sbjct: 468 YAEKGLTPMKN-LTALLFLPVMMLGVSAAQEASASLQTP-FLWMEDLGAPDPLFILPVL- 524 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGL 538 F + ++ +++ + K+ ++ MP +F + S A Sbjct: 525 --------FCALAAVYLLWAVAKTKRQKLL---------WMVLGMPALFA-MVFSLTAAA 566 Query: 539 IIYWSWSNVISIVQQAVIMKMH 560 Y +S + +VQ+A + MH Sbjct: 567 NAYLCFSLTLLLVQRAYVTGMH 588 >gi|190346783|gb|EDK38952.2| hypothetical protein PGUG_03050 [Meyerozyma guilliermondii ATCC 6260] Length = 330 Score = 49.2 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 32/169 (18%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW--------- 459 + +K L+K H + +QIP++ + SL MR+ W Sbjct: 141 KETRKRQKALFKRHGVQIWKNFTLPAIQIPLWVGM------SLSMRNLSGWSTWDVLKNQ 194 Query: 460 -----------GWIKDLAAADPTNIFTL-FGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 W DL +DP ++F L G++ + I I+S + + Sbjct: 195 ALDPSLYTEGALWFTDLTCSDPMHVFPLVLGVISLCNVEWTFKTIQLSIISRKRAFRSSL 254 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + A+ + + V + P L++YW S + S++Q ++ Sbjct: 255 TDAMANVSRMAV-----VFMMAISLHAPVSLVLYWFSSQLFSLIQNIIM 298 >gi|242094868|ref|XP_002437924.1| hypothetical protein SORBIDRAFT_10g004860 [Sorghum bicolor] gi|241916147|gb|EER89291.1| hypothetical protein SORBIDRAFT_10g004860 [Sorghum bicolor] Length = 593 Score = 48.8 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 32/240 (13%), Positives = 68/240 (28%), Gaps = 47/240 (19%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + LM F++L G + + L A I L Sbjct: 136 AVSTILDLMDGFHSLTGLPWWMTISFSTVAMRLLILPALIVQ--LQKTAKIGEVFRRLST 193 Query: 402 KFKQSPPQVLQKAMIQLYKTHNI-----NPLAGCWPILLQIPVFFAIYKVISISLEMRHA 456 P + L++ + L +Q P F ++ + S+ + + Sbjct: 194 SLPTPQPGNNFREEYALFQKKKKELGCPSFLWNFAYFSVQFPCFI-LWMMSIRSMCLNNH 252 Query: 457 PFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP 511 P + W +L + F PI+++ ++ +++S Sbjct: 253 PGFDNGGILWFHNLTEFPHGTLGPTF----------------PILVAGLHYLNVQISFQG 296 Query: 512 ADKGQAM----ILN-----------WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q I + + P G ++YW+ + + S+ QQ + Sbjct: 297 ---SQIKDHPGIFGLLAKYYRIYLDVLTIPLFLIAYVVPQGSLVYWTTNGLFSVAQQLFL 353 >gi|254477913|ref|ZP_05091298.1| 60Kd inner membrane protein [Ruegeria sp. R11] gi|214028498|gb|EEB69334.1| 60Kd inner membrane protein [Ruegeria sp. R11] Length = 1320 Score = 48.8 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 3/120 (2%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 + ++ ++ ++L P+A K ++ EL+E+ P + + A+ Sbjct: 384 HILWGLLALSLITRILILPVALKSERDQIITGETADEMKELKERLAHDPVRKAR-AVQAF 442 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 Y + P+ LL +PV + P + W+ DL DP I Sbjct: 443 YAEKGLTPMKN-LTALLFLPVMMLGVSAAQEASASLQTP-FLWMADLGLPDPLFIMPALF 500 >gi|225680414|gb|EEH18698.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 360 Score = 48.8 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 46/149 (30%), Gaps = 26/149 (17%) Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 G IL Q A + + L + + W+ DL A+DP + + Sbjct: 197 GLLVILQQWISPDAAKAQVPVELSLSTEGAF-WLPDLTASDPLYVLPFAISALMFTHITW 255 Query: 489 HVGI-----WPIIM------SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF--P 535 I P++ + + + M + AL P Sbjct: 256 GSKICKAKELPMLASQGNLQGIFSWAIQR------------TFQVMSIWIAPALMHSEAP 303 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 A L IYW + ++I+Q ++ K Sbjct: 304 AALGIYWLTTTSVAIIQSRLLKKFMPPPT 332 >gi|226287813|gb|EEH43326.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 360 Score = 48.4 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 46/149 (30%), Gaps = 26/149 (17%) Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 G IL Q A + + L + + W+ DL A+DP + + Sbjct: 197 GLLVILQQWICPDAAKAQVPVELSLSTEGAF-WLPDLTASDPLYVLPFAISALMFTHITW 255 Query: 489 HVGI-----WPIIM------SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF--P 535 I P++ + + + M + AL P Sbjct: 256 GSKICKAKELPMLASQGNLQGIFSWAIQR------------TFQVMSIWIAPALMHSEAP 303 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 A L IYW + ++I+Q ++ K Sbjct: 304 AALGIYWLTTTSVAIIQSRLLKKFMPPPT 332 >gi|72160589|ref|YP_288246.1| preprotein translocase YidC subunit [Thermobifida fusca YX] gi|71914321|gb|AAZ54223.1| preprotein translocase YidC subunit [Thermobifida fusca YX] Length = 241 Score = 48.4 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 66/202 (32%), Gaps = 12/202 (5%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 + I T+ ++L PL+ Q + P++ LRE++ P+ L +L Sbjct: 31 SAAATIAFLTLAARVLTLPLSYLQVRGEKIRARLAPQLYALRERY-GHNPERLVAKTREL 89 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH-APFWGWIKDLAAADPTNIFTLF 477 Y +P AGC P L Q P+F + + E+ A + + + + Sbjct: 90 YAREGASPFAGCLPALAQAPMF-TLLYTLFTVPEIDGSANALLALPFAGTPLGSTLPRIL 148 Query: 478 GILPFYLPGFMHVGIWPIIMSLSM---FIQMKMSPP-----PADKGQAMILNWMPVVFVF 529 + + ++ + A + ++P + V Sbjct: 149 ASGDLGALPVFAALLAALAAVAWANRRWLTLPALSAAPAAGQPTPVPAFV-TYLPFLTVV 207 Query: 530 ALSSFPAGLIIYWSWSNVISIV 551 + P IY S ++V Sbjct: 208 IAAFVPLASGIYLVTSTTWTVV 229 >gi|326491389|dbj|BAK05781.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 597 Score = 48.4 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 64/236 (27%), Gaps = 41/236 (17%) Query: 341 FIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLA--KKQYVSTANMKNIQPKIDE 398 F + ++ F+NL G + + L + + + Q Sbjct: 130 FAMDSLVGVLDGFHNLTGLPWWLTISASTVAMRLIILPTLIVQLQKTAKIGQLFQKLPPP 189 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNI-NPLAGCWPILLQIPVFFAIYKVISISLEMRH-- 455 L + + + + L +Q P F I H Sbjct: 190 LPPPLSGRSYRDQYSLFRKKRQELGCPSFLWNFAYFAVQFPCFILWMASIRSMCLSNHPG 249 Query: 456 --APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W +L P ++PI+++ ++ +++S Sbjct: 250 LDNGGILWFNNLTEF----------------PHGALGPVFPILVAGLHYLNVQIS---FQ 290 Query: 514 KGQAM---------------ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 K QA L+ M + P G ++YW+ + + + QQ Sbjct: 291 KSQAKHYPGVLGLLAKYYRIYLDIMAIPLFLIAYVVPQGSLVYWTTNGLFHVAQQL 346 >gi|149238229|ref|XP_001524991.1| hypothetical protein LELG_04023 [Lodderomyces elongisporus NRRL YB-4239] gi|146451588|gb|EDK45844.1| hypothetical protein LELG_04023 [Lodderomyces elongisporus NRRL YB-4239] Length = 341 Score = 48.4 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 55/186 (29%), Gaps = 22/186 (11%) Query: 387 ANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKV 446 P + E+ + ++K L+K H + QIP++ + Sbjct: 148 HTRAAQAPLANMTYEQILLLSTKEVRKRQKVLFKKHGVQIWKNFLLPACQIPLWIIMSLT 207 Query: 447 IS-----ISLEMRH---------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI 492 + S + H W +DL AD +IF + + Sbjct: 208 MRDLSGWSSWDNIHNKALDPSLYTEGCLWFQDLTIADLAHIFPVILGIISLCNIEWTFKT 267 Query: 493 WPIIMSLSMFIQMKMS--PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 + + K+ P D A V + PA L +YW S S+ Sbjct: 268 LEL-----SRLTQKLKYRPTLTDAV-ANFSRLSIVFMMAISIHAPAALTLYWISSQFFSL 321 Query: 551 VQQAVI 556 +Q + Sbjct: 322 IQNIWL 327 >gi|269125945|ref|YP_003299315.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata DSM 43183] gi|268310903|gb|ACY97277.1| 60 kDa inner membrane insertion protein [Thermomonospora curvata DSM 43183] Length = 235 Score = 48.1 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 1/122 (0%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I++ T+ V+L PL+ + + P+I LR ++ P LQ+ + L++ Sbjct: 35 IVVFTMAVRLSLLPLSIRAARGARARARLAPQIAGLRRRYA-HDPVRLQRELAALHRAEG 93 Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 ++P AGC P L Q P FF +Y++ + ++ L A N + PF Sbjct: 94 VSPAAGCLPSLAQAPFFFLMYRLFTAAVVGGRENLLLAQSLLGAPLGQNFAGVVVSAPFS 153 Query: 484 LP 485 P Sbjct: 154 GP 155 >gi|255613972|ref|XP_002539553.1| conserved hypothetical protein [Ricinus communis] gi|223505007|gb|EEF22830.1| conserved hypothetical protein [Ricinus communis] Length = 88 Score = 47.7 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Query: 229 LVEQKYSDIEKSSISNFHESNS-WLGISDKYWASVFIPSKETSFHSQFKYLS-DGHARYQ 286 L + KY +K S W GI+DKYW + IP++ ++Q+ G Y+ Sbjct: 1 LEQSKYQKWKKDKPQQTITSVGGWTGITDKYWLTALIPTQNERINAQYNVTPVAGVDVYE 60 Query: 287 AKFSANEITILPGKSITTTNFLFAGAKE 314 A F+A T+ PG+++T T LFAGAK Sbjct: 61 ANFAAVAKTVNPGQTVTETTRLFAGAKT 88 >gi|149033747|gb|EDL88543.1| similar to hypothetical protein FLJ38991 (predicted), isoform CRA_a [Rattus norvegicus] Length = 155 Score = 47.7 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 19/104 (18%) Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 A W DL A D T I V + + +F K+ + Sbjct: 30 AGGTLWFPDLTAVDSTWIL---------PVSVGVVNLLIV----EIFALQKI---GKSRF 73 Query: 516 QAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 Q + N++ V+ V ++ P+ L++YW S+++ + Q ++ Sbjct: 74 QMYVTNFVRAVSVLMVPVAATVPSALVLYWLCSSLMGLSQNLLL 117 >gi|254518208|ref|ZP_05130264.1| inner membrane insertion protein [Clostridium sp. 7_2_43FAA] gi|226911957|gb|EEH97158.1| inner membrane insertion protein [Clostridium sp. 7_2_43FAA] Length = 212 Score = 47.7 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 82/213 (38%), Gaps = 16/213 (7%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 I ++ + + + G++GIAI+L T+ VKLL P + KQ ++ +I+ Sbjct: 1 MDIIINIFKTMIEFAFQITGDWGIAIVLLTITVKLLMLPFSIKQRIAMKKQIVFSKEIEA 60 Query: 399 LREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 +++K+K + + + + GC+ LLQ+P+ +Y IS Sbjct: 61 VKKKYKNNKKRQDDELNKLYLNNSKG--MFGCFLSLLQLPIISGLYMSISRLPVEAMIML 118 Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 W ++ + D I L + LP + K+ Sbjct: 119 IPWAMNIGSTDDKFIVPLIYTIVSILPSIISYL--------------KIFNSNEKPISIK 164 Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIV 551 + M + + P GL IY+ S++ +++ Sbjct: 165 SIIPMLIFGLVITVKAPIGLGIYFITSSIFTLL 197 >gi|207111464|ref|ZP_03245626.1| putative inner membrane protein translocase component YidC [Helicobacter pylori HPKX_438_CA4C1] Length = 48 Score = 47.3 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 485 PGFMHVGIWPIIMSLSMFIQMKMSP-PPADKGQAMILNWMPVVFV 528 P ++ + I P++M SM+ ++P D QA I +P++F Sbjct: 4 PSWIRIFILPLLMGASMYWHQSVTPNTMTDPMQAKIFKLLPLLFT 48 >gi|325088874|gb|EGC42184.1| mitochondrial export translocase Oxa2 [Ajellomyces capsulatus H88] Length = 366 Score = 46.9 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 46/148 (31%), Gaps = 26/148 (17%) Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 G IL Q + I + + W DL AADP ++ + + + Sbjct: 197 GLLAILQQWFNPDGVKAQIPVEPSLSSQGA-LWFPDLMAADPLSVLPVAISVLMFTHITW 255 Query: 489 HVGI-----WPIIM------SLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF--P 535 + P ++ + + + I M + L P Sbjct: 256 GSKVSKMKDLPKLVSQGNLQGIFSWAIQR------------IFQAMSIWIAPTLLYSEAP 303 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAE 563 A L IYW + ++IVQ ++ K Sbjct: 304 AALSIYWLSTTCVAIVQSRLLKKYMPTP 331 >gi|163742420|ref|ZP_02149807.1| phosphoenolpyruvate synthetase-related protein [Phaeobacter gallaeciensis 2.10] gi|161384370|gb|EDQ08752.1| phosphoenolpyruvate synthetase-related protein [Phaeobacter gallaeciensis 2.10] Length = 1341 Score = 46.9 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 69/194 (35%), Gaps = 26/194 (13%) Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +++ P+A K + ++ L+E+ P + + A+ Y + P+ Sbjct: 416 ITRIMILPVALKSERDQIITNDTADEMKALKERLADDPVRKAR-AVQAFYADKGLTPMKN 474 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 LL +PV + P + W+ DL AADP I + F Sbjct: 475 -LTALLFLPVMMLGVSAAQEASASLQTP-FLWMADLGAADPLFILPVL---------FCA 523 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + ++ ++ Q ++ MP +F + + A Y +S Sbjct: 524 LAAVYLLWAV-----------AKTPRQKTLWMVLGMPALFA-MVFTLTAAANAYLCFSLT 571 Query: 548 ISIVQQAVIMKMHG 561 + +VQ+A + MH Sbjct: 572 LLLVQRAYVTGMHK 585 >gi|225560586|gb|EEH08867.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 366 Score = 46.9 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 56/178 (31%), Gaps = 45/178 (25%) Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 G IL Q + I + + W DL AADP Sbjct: 197 GLLAILQQWFNPDGVKAQIPVEPSLSSQGA-LWFPDLMAADP------------------ 237 Query: 489 HVGIWPIIMSLSMFIQ-------MKMSPPPADKGQ-----------AMILNWMPVVFVFA 530 +GI P+ +S+ MF KM P Q I M + A Sbjct: 238 -LGILPVAISVLMFTHITWGSKVSKMKDLPKLVSQGNLQGIFSWAIQRIFQAMSIWIAPA 296 Query: 531 LSSF--PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST-----FSKNYNSQ 581 L PA L IYW + ++IVQ ++ K ++ T + + +Q Sbjct: 297 LLYSEAPAALSIYWLSTTCVAIVQSRLLKKYMPTPNVPKACVKRTIVRYVYERKPGTQ 354 >gi|301101800|ref|XP_002899988.1| Cytochrome Oxidase Biogenesis (Oxa1) Family [Phytophthora infestans T30-4] gi|262102563|gb|EEY60615.1| Cytochrome Oxidase Biogenesis (Oxa1) Family [Phytophthora infestans T30-4] Length = 360 Score = 46.9 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 36/326 (11%), Positives = 89/326 (27%), Gaps = 44/326 (13%) Query: 265 PSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFL-FAGAKEFPTIHHYEK 323 P F+ + + A +S + +S T L + Sbjct: 22 PISGGQKLLHFRTVQAAVPVFAAPYSLDNRRFSTSESAPPTLELTMTDGQLTDVAAAVTS 81 Query: 324 DLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQY 383 + ++ L + L+ + ++ +L ++ Sbjct: 82 GTGNEPWAIVQGVQSVLETVHTTTGLPWWATLLLSGVTVRAVIFPF--YVLQIQAMQRLI 139 Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVL-------QKAMIQLYKTHNINPLAGCWPILLQ 436 + + + R S + ++ + + K +N P+ + Sbjct: 140 QARPDFSKLHSAYKYARTFTPGSDHKGHLDAILLGRQGLKAVMKKYNTRPIQTIMGSVAY 199 Query: 437 IPVFFAIYKVISISLEMRH-----APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV- 490 IP+F + + + + + K+L D T + + Y + V Sbjct: 200 IPIFVLMAYSARDMVRSGNFAGFDSGGLLFWKNLMETDSTYVLPILAATSTYGNLELSVR 259 Query: 491 ---GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 G W ++ +I + V L + P G+ YW ++ Sbjct: 260 NKSGFWTTLLQGGQYIT--------------------IFAVPVLVNLPQGVFFYWLGASC 299 Query: 548 ISIVQQAVIM-----KMHGAEIGLID 568 S+ Q + + G + + + Sbjct: 300 SSMAQTIAMNNNNFRRRIGLKPRITE 325 >gi|322709833|gb|EFZ01408.1| mitochondrial export translocase Oxa2 [Metarhizium anisopliae ARSEF 23] Length = 348 Score = 46.9 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 15/95 (15%) Query: 459 WGWIKDLAAADPTNIFT-----LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W DL A DP + L + +G+ + + P Sbjct: 211 CLWFADLTAMDPYYVLPMLCSALLARTSWGRLSKDQLGVLLSLDG------SRAPKTPMA 264 Query: 514 KGQAMI---LNWMPVVFVFALSSFPAGLIIYWSWS 545 + Q I L +P+ F + P+ + +YW+ + Sbjct: 265 RIQTGIGRALLLIPL-FPMLFADLPSAIFLYWATT 298 >gi|213423218|ref|ZP_03356225.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 37 Score = 46.9 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Query: 494 PIIMSLSMFIQMKMSPPP-ADKGQAMILNWMPVVFVF 529 PI+M ++MF KMSP D Q I+ +MPV+F Sbjct: 1 PILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTV 37 >gi|42562960|ref|NP_176688.3| OXA1 family protein [Arabidopsis thaliana] gi|38372237|sp|Q8L718|ALB32_ARATH RecName: Full=ALBINO3-like protein 2, chloroplastic; Short=Ath5; Flags: Precursor gi|6227006|gb|AAF06042.1|AC009360_7 F16G16.8 [Arabidopsis thaliana] gi|332196206|gb|AEE34327.1| ALBINO3-like protein 2 [Arabidopsis thaliana] Length = 525 Score = 46.9 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 72/243 (29%), Gaps = 39/243 (16%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 +I + + F+ G I+ ++ L + + Sbjct: 70 IIPTDDSSLPVLAVVDFLEGFHEFTGLPWWMIIASSTVAVRLALLPLLILQLKKLKTISE 129 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL----LQIPVFFAIYKVIS 448 + + + K +Q+P FF + I Sbjct: 130 LLPKLPMPI-PETPTLKGSIDQFSHFLKESRAIGCPSFLWFFPYLSVQLPCFFLLMASIR 188 Query: 449 ISLEMRHAPFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI 503 + P + W ++L+ LPG ++PI+++ +I Sbjct: 189 KM-SLDGHPGFDSGGVLWFQNLS----------------DLPGGSFGPVFPILIATFHYI 231 Query: 504 QMKMSPPPADKGQAM-----ILNW-------MPVVFVFALSSFPAGLIIYWSWSNVISIV 551 +++S + Q ++ + + V F + P G ++YW ++ ++I Sbjct: 232 NIQISFDTSTIRQTTGLTGLLMRYYKLYLEILSVPLFFVGYAIPQGSLVYWVTNSSVNIF 291 Query: 552 QQA 554 QQ Sbjct: 292 QQL 294 >gi|295132778|ref|YP_003583454.1| beta-galactosidase [Zunongwangia profunda SM-A87] gi|294980793|gb|ADF51258.1| beta-galactosidase [Zunongwangia profunda SM-A87] Length = 1055 Score = 46.5 bits (108), Expect = 0.011, Method: Composition-based stats. Identities = 21/204 (10%), Positives = 54/204 (26%), Gaps = 1/204 (0%) Query: 52 SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLL 111 A + + +++ + G N K F+ +L+ + S P Sbjct: 755 DAADIATAGQLNVSKKGDQLQFSTEKIEGVFNTKTGSFESYHLKDHQQSPISVFPEPY-F 813 Query: 112 SPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + T N + + A N+ ++ K + + Sbjct: 814 WRAPTDNDFGNGMPQKLKAWKEATHNATVTHVEVAKKAKEGQQITVTYQLGGVAVPYTVA 873 Query: 172 ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVE 231 ++ + K+ T+ ++ R++ +G + S Sbjct: 874 YFIENNGDIKVTATLDSDKDLPELPRFGMRMVLPGDYDNLEYYGRGPWENYSDRNTSAFM 933 Query: 232 QKYSDIEKSSISNFHESNSWLGIS 255 Y D ++ + + G Sbjct: 934 GVYKDQVENQFTWEYIRPQEAGYK 957 >gi|297837823|ref|XP_002886793.1| hypothetical protein ARALYDRAFT_475515 [Arabidopsis lyrata subsp. lyrata] gi|297332634|gb|EFH63052.1| hypothetical protein ARALYDRAFT_475515 [Arabidopsis lyrata subsp. lyrata] Length = 524 Score = 46.5 bits (108), Expect = 0.011, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 79/255 (30%), Gaps = 44/255 (17%) Query: 337 GWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKI 396 + + F+ G I+ ++ L + + Sbjct: 73 DDSSLPVLFVVDFLDGFHEFTGLPWWMIIASSTVAVRLALLPLLILQLKKLKTISELLPQ 132 Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL----LQIPVFFAIYKVISISLE 452 + + + K +Q+P FF + I Sbjct: 133 LPMPI-PETPTLKGSIDQFSHFLKESRAIGCPSFLWFFPYLSVQLPCFFLLMASIRKM-S 190 Query: 453 MRHAPFW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKM 507 + P + W ++L+ LP ++PI+++ +I +++ Sbjct: 191 LDGHPGFDSGGALWFQNLS----------------DLPVGSFGPVFPILIAAFHYINIQI 234 Query: 508 SPPPADKGQAM-----ILNW---------MPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 S + Q ++ + +P+ FV + P G ++YW ++ ++I QQ Sbjct: 235 SFDTSTIRQTTGLTGLLMRYYKLYLEILGVPLFFV--GYAIPQGSLVYWVTNSSVNIFQQ 292 Query: 554 AVIMK-MHGAEIGLI 567 + GA++GL+ Sbjct: 293 LSLKHPRVGAKLGLL 307 >gi|312073694|ref|XP_003139635.1| 60Kd inner membrane protein [Loa loa] gi|307765200|gb|EFO24434.1| 60Kd inner membrane protein [Loa loa] Length = 399 Score = 46.5 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 87/300 (29%), Gaps = 32/300 (10%) Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFA--GAKEFPTIHHYEKDL 325 + S K + IT +P ++++ F F + + + Sbjct: 42 GVRYASTAKDIFVPSQDSLTGIPDIPITNMPPEAVSGPGFSFYEKWLLKVDVLDMLGLN- 100 Query: 326 AIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVS 385 I E + W+ + L + + +I+ T+ ++L F Sbjct: 101 DISTVERTGLFTWYSPASWYRIGLEFIHNHFDLPWFASIICITLCLRLAFLRATLFLQRF 160 Query: 386 TANMKNIQPKIDELREKFKQSP--------PQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 + EK K++ + + T+N+ + +L Sbjct: 161 APKKMIHDETLKMFDEKKKEAQEVVRCEALYRKISHDENVYIDTYNLRSSNRYYYFVLNS 220 Query: 438 PVFFAIYKVISISLEMRHAPF----WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIW 493 +F + Y+ I + E + W DL DP + Sbjct: 221 VLFISQYRGIILMAENNFPGWDTGGALWFLDLTMTDPNFLVPALSS-------------- 266 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSS--FPAGLIIYWSWSNVISIV 551 +++ ++F+ + + + V S P + IYW SN +++ Sbjct: 267 -VLIGCTLFLGYDPTGTASASKYVKAFKYFVVPVGVFFFSSRVPVAISIYWCTSNFFNLL 325 >gi|163739228|ref|ZP_02146640.1| PEP-utilising enzyme, mobile region [Phaeobacter gallaeciensis BS107] gi|161387628|gb|EDQ11985.1| PEP-utilising enzyme, mobile region [Phaeobacter gallaeciensis BS107] Length = 1341 Score = 46.5 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 69/197 (35%), Gaps = 29/197 (14%) Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +++ P+A K + ++ L+E+ P + + A+ Y + P+ Sbjct: 416 ITRIMILPVALKSERDQITTNDTADEMKALKERLADDPVRKAR-AVQAFYADKGLTPMRN 474 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 LL +PV + P + W+ DL AADP I + F Sbjct: 475 -LTALLFLPVMMLGVSAAQEASASLQTP-FLWMADLGAADPLFILPVL---------FCA 523 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAM--ILNWMPVVFVFALSSFPAGLIIYWSWSNV 547 + ++ ++ Q ++ MP +F + + A Y +S Sbjct: 524 LAAVYLLWAV-----------AKTPRQKTLWMVLGMPALFA-MVFTLTAAANAYLCFSLT 571 Query: 548 ISIVQQAVIM---KMHG 561 + +VQ+A + + G Sbjct: 572 LLLVQRAYVTGLHRKLG 588 >gi|148271706|ref|YP_001221267.1| hypothetical protein CMM_0527 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829636|emb|CAN00552.1| putative membrane protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 255 Score = 46.5 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 74/184 (40%), Gaps = 16/184 (8%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 G+A++L T+ V+ L P+ Q + + I P + ELR + P Q L +A +LY Sbjct: 36 TGVAVILLTLGVRALLVPVGVAQVRAEIQRRRIAPALAELRRRHAGKPEQ-LSRATQELY 94 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVIS------ISLEMRHAPFWGWIKDLAAADPTNI 473 +PLAGC P L Q PV A+Y + + + + AP + I ++A Sbjct: 95 AREGASPLAGCLPTLAQAPVLAAVYALFAHARIGGEANALLAAP-FAGIPLGSSALSAAA 153 Query: 474 FTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG------QAMILNWMPVVF 527 + ++ + + + + + Q P P D ++ +P V Sbjct: 154 MGVTPLVVSVVVLGLLAIVIEVRRRADLRFQG--PPAPVDPALPGMAGMTAMMRVLPFVT 211 Query: 528 VFAL 531 V Sbjct: 212 VVFA 215 >gi|134109449|ref|XP_776839.1| hypothetical protein CNBC3300 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259519|gb|EAL22192.1| hypothetical protein CNBC3300 [Cryptococcus neoformans var. neoformans B-3501A] Length = 459 Score = 46.5 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%) Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 A IL + + F S P+G+++YW S S +Q + Sbjct: 401 ANILRFSAIGFAMIASQMPSGVVLYWFTSLCYSFIQNFFLT 441 >gi|58264942|ref|XP_569627.1| cytochrome c oxidase biogenesis-related protein [Cryptococcus neoformans var. neoformans JEC21] gi|57225859|gb|AAW42320.1| cytochrome c oxidase biogenesis-related protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 461 Score = 46.1 bits (107), Expect = 0.014, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%) Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 A IL + + F S P+G+++YW S S +Q + Sbjct: 403 ANILRFSAIGFAMIASQMPSGVVLYWFTSLCYSFIQNFFLT 443 >gi|255935419|ref|XP_002558736.1| Pc13g02980 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583356|emb|CAP91367.1| Pc13g02980 [Penicillium chrysogenum Wisconsin 54-1255] Length = 345 Score = 46.1 bits (107), Expect = 0.015, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 73/250 (29%), Gaps = 55/250 (22%) Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 +L + + + + E + L+K L+K ++ Sbjct: 96 ILSAWMKRYAQKQMDQVPTANLRNYNNTEVKRNI-LTELRKRTAVLHKRWGVSSKYKAIG 154 Query: 433 ILLQIPVFFAIYKVISIS--------------LEMRHAPFW------------------G 460 LQIPVF A+ + + +E P Sbjct: 155 -FLQIPVFIALMESLRGMSGNNSGIIAWLSSFIESSQDPASTAQPLHLTIEPTLANEGAL 213 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWP-----IIMSLSMFIQMKMSPPPADKG 515 W DL A DPT + L M + P ++ + M+ Q + Sbjct: 214 WFPDLLAGDPTGVLPLCLTASILGNVLMGWKVKPWKEIALLPKIEMYKQTLFTG------ 267 Query: 516 QAMILNWMPVVFV--FALSSF----PAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 L +V +SF P L++YW S ++ +Q V+ K + G Sbjct: 268 ----LRSFVIVLTCYIGFASFVQGMPTALMLYWITSTNVATLQTWVLDKKVFSPPGFKRF 323 Query: 570 LRSTFSKNYN 579 + + + Sbjct: 324 VEKSIAFEKP 333 >gi|256088544|ref|XP_002580391.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial) [Schistosoma mansoni] gi|238665960|emb|CAZ36630.1| cytochrome oxidase biogenesis protein (oxa1 mitochondrial), putative [Schistosoma mansoni] Length = 314 Score = 46.1 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 5/186 (2%) Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 + + + A + N + + +K Q+ ++ I+ + + +PL ++QIP Sbjct: 90 QQNRQMIQAKLSNAEYYRNISNKKQLLLENQLFRRFFIKTCEENGCHPLKSSVTGIIQIP 149 Query: 439 VFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMS 498 ++ I + P + L A N+ +LPF + + Sbjct: 150 LWLTFTFSIRYLSGFQLYPQFD-SNHLIADSSLNVPCSGFLLPFICTLAGVANVELACLR 208 Query: 499 LSMFIQMKMSPPPADKGQAMILNWMPVV--FVFA--LSSFPAGLIIYWSWSNVISIVQQA 554 +F K + D I+ + V F S FP +IYW S+V + Sbjct: 209 RPLFFNPKSNSVIPDPLPYNIVRFAGWVGNFTLFACCSFFPKAFVIYWCTSSVHQLCIHI 268 Query: 555 VIMKMH 560 +IM + Sbjct: 269 LIMHPY 274 >gi|330932025|ref|XP_003303619.1| hypothetical protein PTT_15915 [Pyrenophora teres f. teres 0-1] gi|311320243|gb|EFQ88274.1| hypothetical protein PTT_15915 [Pyrenophora teres f. teres 0-1] Length = 333 Score = 46.1 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 80/313 (25%), Gaps = 68/313 (21%) Query: 300 KSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGN 359 S+ + + KD + L + V Sbjct: 18 SSVIPRASTWCPSTRAFHASAPRKDALVDAILYLPHEMMSLIHTTVPWYAAIPISAFVAR 77 Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAM 415 + LL ++ + + + + L++A Sbjct: 78 GLLVTTAGVHARSLLARWFGLLPLRHALALQKRDEMLQQRTFRTPREATLAAKNELRQAA 137 Query: 416 IQLYKTHNINPLAGCWPILLQIPVFFAIY--------------------------KVISI 449 L K L QIP+FFA+ +++ Sbjct: 138 SALDKRWKTTLKGQIGWTLGQIPIFFAMAETIRQKCGAQDGLMGMGIAAIKGEGTTMVNE 197 Query: 450 SLEM--RHAPF-----------WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII 496 S E+ R P W DL DP +G+ P I Sbjct: 198 SGELVVRVTPTAWFEPSLANEGMLWFPDLLVPDP-------------------MGVLPFI 238 Query: 497 MSLSMF--IQMKMSPPPADKG----QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 +S MF I + PP D L + ++ PA L++YW S + Sbjct: 239 VSGLMFSNIYFTKNAPPTDAKWPKFIRRTLLSVALLIGPLGQQMPAALMLYWCSSTTSVM 298 Query: 551 VQQAVIMKMHGAE 563 + + + + AE Sbjct: 299 LWNVWLDRKYPAE 311 >gi|240280153|gb|EER43657.1| mitochondrial export translocase Oxa2 [Ajellomyces capsulatus H143] Length = 279 Score = 45.8 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 48/155 (30%), Gaps = 40/155 (25%) Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 G IL Q + I + + W DL AADP Sbjct: 70 GLLAILQQWFNPDGVKAQIPVEPSLSSQGA-LWFPDLMAADP------------------ 110 Query: 489 HVGIWPIIMSLSMFIQ-------MKMSPPPADKGQ-----------AMILNWMPVVFVFA 530 +G+ P+ +S+ MF KM P Q I M + Sbjct: 111 -LGVLPVAISVLMFTHITWGSKVSKMKDLPKLVSQGNLQGIFSWAIQRIFQAMSIWIAPT 169 Query: 531 LSSF--PAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 L PA L IYW + ++IVQ ++ K Sbjct: 170 LLYSEAPAALSIYWLSTTCVAIVQSRLLKKYMPTP 204 >gi|146079970|ref|XP_001463916.1| hypothetical protein [Leishmania infantum JPCM5] gi|134068004|emb|CAM66289.1| conserved hypothetical protein [Leishmania infantum JPCM5] gi|322497304|emb|CBZ32380.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 441 Score = 45.8 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 71/219 (32%), Gaps = 51/219 (23%) Query: 352 YFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV- 410 + +G +G + +++L + + ++ M +I P+I E+ ++ Sbjct: 150 FMSFDLGGWGHVFFFYGLCMRVLTLIPSLYSHRNSLRMAHIGPQISEITNNQNKAKNDRT 209 Query: 411 ------------LQKAMIQLYKTHNINPLAGCWPIL---LQIPVFFAIYKVISISLEMRH 455 + L K HN + + + F +I ++ ++ Sbjct: 210 LSSAEKRVIKDGYNRMKYALCKKHNCSQWKSFLTTFTTPITMSAFLSIRRLAMYETDLEM 269 Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 AP + W+KDL DPT P I MF+ ++ + Sbjct: 270 AP-FLWVKDLTMPDPTY-------------------ALPAI-CAGMFL---LNFEMNQRM 305 Query: 516 QAM-----------ILNWMPVVFVFALSSFPAGLIIYWS 543 Q ++ VV ++ + P+ + YW Sbjct: 306 QRGGRSASGLYVRWVVRASSVVGIYFFAGQPSAMFAYWI 344 >gi|207345808|gb|EDZ72510.1| YER154Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 275 Score = 45.8 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 72/223 (32%), Gaps = 13/223 (5%) Query: 262 VFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHY 321 + + F+ A + T LP T++ A I + Sbjct: 24 TIVLPRPHPSWISFQAKRFNSTGPNANDVSEIQTQLPSIDELTSSAPSLSASTSDLIANT 83 Query: 322 EKDLA-----IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIMLTTVFVKLLF 375 + + I + +Y+ + + ++ + G I TT+ ++ L Sbjct: 84 TQTVGELSSHIGYLNSIGLAQTWYWPSDIIQHVLEAVHVYSGLPWWGTIAATTILIRCLM 143 Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINP-------LA 428 FPL K + A +I+P++D L K + + + K + A Sbjct: 144 FPLYVKSSDTVARNSHIKPELDALNNKLMSTTDLQQGQLVAMQRKKLLSSHGIKNRWLAA 203 Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPT 471 I + + F A+ + + ++ W DL ADP Sbjct: 204 PMLQIPIALGFFNALRHMANYPVDGFANQGVAWFTDLTQADPY 246 >gi|110755911|ref|XP_001120913.1| PREDICTED: mitochondrial inner membrane protein COX18-like [Apis mellifera] Length = 347 Score = 45.4 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 87/257 (33%), Gaps = 18/257 (7%) Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANM 389 ++ + A M + + I + T + L F L + + Sbjct: 79 LRLMHYQTGLPWWASIMLTSIIARTIINLPLNILDVHTKAKQENLKFELREIAEKIQKKV 138 Query: 390 KNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + ++ + + K QLY +N +P ILLQ P++ + Sbjct: 139 QRQALSLELSPYRAHYLFTRDFNKEQKQLYIKNNCHPFKSVAIILLQAPIWISF------ 192 Query: 450 SLEMRHAPFWGWIKDLAA-ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S+ +R+ + + A D + T L H I P + LS ++++ Sbjct: 193 SVAVRNICYMLPQVNTATLQDFKELTTGGFGWIKNLIDIDHYFILPSLFGLSNLAILEIN 252 Query: 509 PP---PADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM---- 557 D + I + + FV ++ P+ L ++W +N +IV +++ Sbjct: 253 QVLFHVKDSKFSRIYKNFCRVLIIGFVPLMACLPSCLSLFWVTNNCCAIVYNLLLLSPKV 312 Query: 558 KMHGAEIGLIDRLRSTF 574 + G LR + Sbjct: 313 RRLGKIPKTDSELRRPY 329 >gi|71755549|ref|XP_828689.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70834075|gb|EAN79577.1| hypothetical protein, conserved [Trypanosoma brucei] Length = 418 Score = 45.4 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 66/214 (30%), Gaps = 51/214 (23%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV------ 410 G +G +F++L + + + + +I P++ E+ ++ Sbjct: 130 FGGWGNVFFFYGIFMRLCTLVPSLLSHRNALRLSHINPQLSEIATCQNRAKSDRSLSTAE 189 Query: 411 -------LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL---EMRHAPFWG 460 + L K H+ ++ A V +++ ++ AP + Sbjct: 190 KRVIKEGYNRMKYALMKKHHCAQWKNFLSMITAPVTLSAFISVRRLAVYETDLERAP-FL 248 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-- 518 WI DL DPT P+I MF+ M+ Q Sbjct: 249 WIVDLTMPDPTYG-------------------LPMI-CAGMFL---MNFELNQMMQRGGR 285 Query: 519 ---------ILNWMPVVFVFALSSFPAGLIIYWS 543 + V+ V+ SS PA + YW Sbjct: 286 SSTGLYVRWGMRVGSVIGVYFFSSQPAAMFAYWI 319 >gi|198418301|ref|XP_002119790.1| PREDICTED: similar to MGC131222 protein [Ciona intestinalis] Length = 352 Score = 45.4 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 101/305 (33%), Gaps = 42/305 (13%) Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVG 358 + + ++ + T + D I + L F P ++ ++ L+ Sbjct: 48 SSNFSEDYGKYSEPGTYETFIGWFTDSGIIQSVELYLTSMHDFTHLPWWLSITLSTFLLR 107 Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 + M ++ + N + + ++K+ + + K + Sbjct: 108 GIVMTPMTIYQMKNMIKYQSFIPVLEKLQNKLKLDVEKAAEKKKWDDATKVLNYKVNLNH 167 Query: 419 YKTHNI--NPLAGCW----PILLQIPVFFAIYKVIS-ISLEMRHAPF------------- 458 YK + N + G +QIP++ ++ + ++L ++ P Sbjct: 168 YKRKMMKDNQIPGILKRYGLPFVQIPLWVSMSVAMRHLTLNLQFTPPSDQLLIVASQLST 227 Query: 459 --WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGI---WPIIMSLSMFIQMKMSPPPAD 513 W DL + DP + + L +H G + ++ Sbjct: 228 EGCLWFVDLCSVDPYFLLPVLLCAVNLLIIEIHRGGRNELIGLNKAFVYF---------- 277 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 + + V+ + S PAG+++YW S+V +Q A+++K + + + + Sbjct: 278 ------MRTIAVILLPIASQMPAGVVMYWLSSSVYGAIQ-ALVLKSYRFKKLVEIPISPN 330 Query: 574 FSKNY 578 SK Sbjct: 331 DSKTP 335 >gi|258576489|ref|XP_002542426.1| predicted protein [Uncinocarpus reesii 1704] gi|237902692|gb|EEP77093.1| predicted protein [Uncinocarpus reesii 1704] Length = 229 Score = 45.4 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 68/194 (35%), Gaps = 55/194 (28%) Query: 412 QKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH---------------A 456 +K M +LYK NI P + +Q+PV+ + + I + M A Sbjct: 11 RKKMKELYKRWNIRP-WTRYAPWVQLPVWLTMMESIRRMVGMSGGLLNIIQSWVEKHPEA 69 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI-------QMKMSP 509 P ++ L+ L P G+ P I++ ++F SP Sbjct: 70 PKVPIVQSLSTEGALWFPDLLVADPN--------GVLPAILAATVFTNVTWGWKTQ--SP 119 Query: 510 PPADKG-------------------QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 K QA L PV+ +S PAG++IYW S + + Sbjct: 120 EEISKMVLRKERIKARGLGILKRTFQASALLLWPVM---TMSEVPAGMLIYWISSTLFAT 176 Query: 551 VQQAVIMKMHGAEI 564 Q ++ K+ A+ Sbjct: 177 AQTRILPKIIAAKP 190 >gi|115389208|ref|XP_001212109.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114194505|gb|EAU36205.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 263 Score = 45.4 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 71/241 (29%), Gaps = 62/241 (25%) Query: 373 LLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWP 432 L K Y K Q L ++ + ++K +L+K + P Sbjct: 18 LPLLNSWSKYYSQDLLRKKAQSPDSILPPDIRRDLAKNIKKKREELHKRFEVVPYWKGLN 77 Query: 433 ILLQIPVFFAIYKVIS-------------------------ISLEMRHAPFW-----GWI 462 LQIPV+ +I + + + + P W Sbjct: 78 -FLQIPVWISIMESLRAMSGNDKGLVPYLLSLVEPASSTTSSPVHLAVEPSLATEGALWF 136 Query: 463 KDLAAADPTNIFTLFGILP--------FYLPGFMHVGIWP--------IIMSLSMFIQMK 506 DL A D T I L + +P + P I + FIQ Sbjct: 137 PDLLAGDATGILPAALTLSILLNVRTGWKVPPLRDLADLPKPELAKQFIYRGIRTFIQ-- 194 Query: 507 MSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 + V +S P+ L+IYW S+ ++ +Q + K A+ L Sbjct: 195 -------------FLALNVGLSAYVSGMPSALMIYWITSSNVATLQTLFLEKYMFAKKPL 241 Query: 567 I 567 Sbjct: 242 K 242 >gi|261334581|emb|CBH17575.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 418 Score = 45.4 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 66/214 (30%), Gaps = 51/214 (23%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQV------ 410 G +G +F++L + + + + +I P++ E+ ++ Sbjct: 130 FGGWGNVFFFYGIFMRLCTLVPSLLSHRNALRLSHINPQLSEIATCQNRAKSDRSLSTAE 189 Query: 411 -------LQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL---EMRHAPFWG 460 + L K H+ ++ A V +++ ++ AP + Sbjct: 190 KRVIKEGYNRMKYALMKKHHCAQWKNFLSMITAPVTLSAFISVRRLAVYETDLERAP-FL 248 Query: 461 WIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-- 518 WI DL DPT P+I MF+ M+ Q Sbjct: 249 WIVDLTMPDPTYG-------------------LPMI-CAGMFL---MNFELNQMMQRGGR 285 Query: 519 ---------ILNWMPVVFVFALSSFPAGLIIYWS 543 + V+ V+ SS PA + YW Sbjct: 286 SSTGLYVRWGMRVGSVIGVYFFSSQPAAMFAYWI 319 >gi|238596974|ref|XP_002394199.1| hypothetical protein MPER_05950 [Moniliophthora perniciosa FA553] gi|215462847|gb|EEB95129.1| hypothetical protein MPER_05950 [Moniliophthora perniciosa FA553] Length = 198 Score = 45.4 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 55/194 (28%), Gaps = 27/194 (13%) Query: 383 YVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGC-WPILLQIPVFF 441 + +E+ + +L+K H +PL P L QIP F Sbjct: 1 MQRVRITGEKEYPEKIHKERCTAIMTARRK----ELWKIHKCSPLITMAVPPLSQIPPFV 56 Query: 442 AIYKVISI----SLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIM 497 + + + + + L ADPT + L ++ + Sbjct: 57 IMTMIFARLSADPFSGFDSESVFTLTTLNHADPTMTMPVILGLLTMANVEVNNWVLT--- 113 Query: 498 SLSMFIQMK-MSPPPADKGQ---------AMI----LNWMPVVFVFALSSFPAGLIIYWS 543 + K + Q I + + V + + P + +YW Sbjct: 114 -ATEKGMQKEIQEKKEQIAQEQGVRHIEPQKIVKSAMRVLSVGRIGLGAIAPGAVCLYWV 172 Query: 544 WSNVISIVQQAVIM 557 S +VQ ++ Sbjct: 173 TSAAFGLVQTWILN 186 >gi|198417734|ref|XP_002128332.1| PREDICTED: similar to predicted protein [Ciona intestinalis] Length = 272 Score = 45.4 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 18/184 (9%) Query: 380 KKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPV 439 K + + K +L+ + ++ + + +K H P++ L + Sbjct: 1 MKSSQVMPLQQKMMTKFQKLQRSSDPVQQALGRQKLQKFFKKHGTGPVSTLANSLPMPII 60 Query: 440 FF----AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTL--FGILPFYLPGFMHVGIW 493 F AI ++ ++ + A W++ L A DP + L G++ + G Sbjct: 61 FMSSITAIRQMSAVPVPSLEATSLLWMESLVAGDPYRVLPLVTGGVIGITIHSSFKSG-- 118 Query: 494 PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQ 553 +I +S KM P MP++ P + +Y + + + Sbjct: 119 -MIAGVSPSTIQKMKFVPLLPI-----VLMPLLMG----HLPCSITLYILTNTCFTYLST 168 Query: 554 AVIM 557 ++ Sbjct: 169 LLLQ 172 >gi|170595399|ref|XP_001902367.1| hypothetical protein [Brugia malayi] gi|158589998|gb|EDP28782.1| conserved hypothetical protein [Brugia malayi] Length = 392 Score = 45.4 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 32/105 (30%), Gaps = 32/105 (30%) Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ 516 DL +DP + + F + I + Q Sbjct: 167 SGMLSFTDLTVSDPAFLLPTLTAICFTFTTKKWIEIL--------------------QMQ 206 Query: 517 AMILNWM----------PVV--FVFALSSFPAGLIIYWSWSNVIS 549 + NWM P+ F S+ P+ + IYW S++IS Sbjct: 207 KTVSNWMLGLKPYNTIYPIAACSFFVASNVPSVVCIYWITSSLIS 251 >gi|322489311|emb|CBZ24569.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 445 Score = 45.0 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 30/249 (12%), Positives = 76/249 (30%), Gaps = 44/249 (17%) Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 ++ I + F++ WG +F L++ +L + Sbjct: 133 VSFLQPVEKQVEIMRSLRHDGFMSFDLG-GWGHVFFFYGLCMRLLTLIPSLYSHRN---- 187 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 +++ + + N + ++ + ++ A+ + +K Sbjct: 188 ----SLRMAHIGPQISEITNNQNKAKNDRTLSSAEKRVIKDGYNRMKYALCKKHKCSQWK 243 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 + + + + F +I ++ ++ AP + W+KDL DPT Sbjct: 244 SFLTTFTMPITMSAFLSIRRLAMYETDLEMAP-FLWVKDLTMPDPTY------------- 289 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-----------ILNWMPVVFVFALSSF 534 P I MF+ ++ + Q + +V ++ + Sbjct: 290 ------ALPAI-CAGMFL---LNFEMNQRMQRGGRSASGLYVRWAVRASSLVGIYFFAGQ 339 Query: 535 PAGLIIYWS 543 P+ + YW Sbjct: 340 PSAMFAYWI 348 >gi|299747770|ref|XP_001837247.2| hypothetical protein CC1G_00383 [Coprinopsis cinerea okayama7#130] gi|298407670|gb|EAU84864.2| hypothetical protein CC1G_00383 [Coprinopsis cinerea okayama7#130] Length = 326 Score = 45.0 bits (104), Expect = 0.032, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 68/189 (35%), Gaps = 22/189 (11%) Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + ++ +P + E K Q +K +++ + + P L+Q+P FF I Sbjct: 107 MKADKIRGDKPFLIEYHAKRCQEILNARRKELMREHGCQTWKSM--LVPPLVQLPPFFVI 164 Query: 444 YKVISISLE---MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 ++ E + + + +L DPT + + + +M+ + Sbjct: 165 TLMLRRLSEGPTPFDSEAFFTLTNLVHPDPTMTLPILLGVITMANVETNNW----LMTAT 220 Query: 501 MFIQMKMSPPPADKGQA---------MILN----WMPVVFVFALSSFPAGLIIYWSWSNV 547 +K +K +A I+ + V+ + S P + +YW S Sbjct: 221 QRANLKKLEEKREKMKAEGKRILEPGKIIKNALRGLSVIRILVASVMPGSISLYWVTSAS 280 Query: 548 ISIVQQAVI 556 + +VQ ++ Sbjct: 281 LGLVQTWIM 289 >gi|321474738|gb|EFX85702.1| hypothetical protein DAPPUDRAFT_313414 [Daphnia pulex] Length = 150 Score = 45.0 bits (104), Expect = 0.033, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 17/33 (51%) Query: 520 LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 +P + +F ++ YW +NVIS+VQ Sbjct: 22 FRAIPFIMFPITMNFSGAILCYWLTTNVISLVQ 54 >gi|258571093|ref|XP_002544350.1| predicted protein [Uncinocarpus reesii 1704] gi|237904620|gb|EEP79021.1| predicted protein [Uncinocarpus reesii 1704] Length = 310 Score = 45.0 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 35/71 (49%), Gaps = 5/71 (7%) Query: 490 VGIWPIIMSLSMFIQMK----MSPPPADKGQAMILNW-MPVVFVFALSSFPAGLIIYWSW 544 + P++ S+++ +K M + + MP++ A+ +PA L +Y++ Sbjct: 91 ISSLPLVTGGSVYLAIKRGGEMGMDIKNSPLGKFMLVGMPLISTVAMLFWPAVLQLYFAS 150 Query: 545 SNVISIVQQAV 555 + ++++VQ + Sbjct: 151 TGILALVQSYL 161 >gi|322698535|gb|EFY90304.1| mitochondrial export translocase Oxa2 [Metarhizium acridum CQMa 102] Length = 348 Score = 45.0 bits (104), Expect = 0.037, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 15/95 (15%) Query: 459 WGWIKDLAAADPTNIFT-----LFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 W DL A DP + L + +G+ + + P Sbjct: 211 CLWFVDLTAMDPYYVLPMLCSALLARTSWGRLSKDQLGVLLSLDG------SRTPKTPMA 264 Query: 514 KGQAMI---LNWMPVVFVFALSSFPAGLIIYWSWS 545 + Q I L +P+ F + P+ + +YW+ + Sbjct: 265 RIQTGIGRALLLIPL-FPMLFADLPSAIFVYWATT 298 >gi|320169653|gb|EFW46552.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 2564 Score = 44.6 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 57/466 (12%), Positives = 136/466 (29%), Gaps = 32/466 (6%) Query: 92 LNLRGYHLDVSSNSPIVTLLSPSNTKN--AYFAELDYVSTANNIELPNSNTVWNLISGKI 149 + L+ Y + N L+S + Y + L + Sbjct: 1847 VVLKNYIREQGDNIKSYNLVSDTANYLNVLYHNVSSDNIELVSQVLESLVEFCQGNGDNQ 1906 Query: 150 LTPTTPIKLVFKNANNILFERT-ISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQ 208 + L N E T + + K+ ++ + + ++ + Sbjct: 1907 IAVFDAKCLDGINHIFRQHEYTGMPCPQVAELKLHAANLVLTMLEEQTEQAIQLSKELHT 1966 Query: 209 TATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE 268 + + Y+ + + L + + +K Sbjct: 1967 QLDIRAIHENMTRYHYEHQHSKHLGYTAEHPEPADVAYVFYNILASLSD-FTTTNYNAKP 2025 Query: 269 TSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLF-------AGAKEFPTIHHY 321 + K T + +++ T + +K + H Sbjct: 2026 YTVKPSTKGGKPEAEGSAKSDKVKLETNIKLINVSYTGTVHGSVRLGSVSSKNLTALAHG 2085 Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 K+ A + A S ++ N ++ + V + P AK+ Sbjct: 2086 NKNAAKTFKVLPSKLYVQAPSAYAAIQGQSGSIEVLRNDILSKVHFRVRNRDALRPAAKE 2145 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 + + T + + KI + + + + ++ + NP++ + + P F+ Sbjct: 2146 RLLWTVDRSSPTDKIRDFISQCQDIRDE------MKYQEQLLSNPISSFF--VRGSPFFY 2197 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAA-DPTNIFTLFGILPFYLPGFMHVGIWPIIMSLS 500 + V+ ++L + + +A DPT+ +Y P G + +S Sbjct: 2198 --WGVLLVTLLL----NIFILVSWSAPTDPTD--WRPNTDDWYNPLLYIFGGIHVALSAC 2249 Query: 501 MFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII--YWSW 544 FI+ ++ PP Q L P+ ++ L AG+ + Y+ Sbjct: 2250 TFIEFFLTHPPTRPQQ--FLTLAPIYYILFLGMSIAGITVRGYFFC 2293 >gi|153871522|ref|ZP_02000673.1| Lipid transport protein [Beggiatoa sp. PS] gi|152072013|gb|EDN69328.1| Lipid transport protein [Beggiatoa sp. PS] Length = 690 Score = 44.6 bits (103), Expect = 0.051, Method: Composition-based stats. Identities = 32/281 (11%), Positives = 70/281 (24%), Gaps = 25/281 (8%) Query: 1 MERNWNYFVAIALSVII-VYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLID 59 M + + A VII V Y P + + Q+ K Q S Sbjct: 1 MMNYKKFLLITAFLVIIGVVGGLFLYETPSPPTVESSEPVPQSSKSVPQSSKSVPQSQPV 60 Query: 60 DRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNA 119 + +P++ +K +L + S SN + Sbjct: 61 TQTPLPESAPKITIK-DALKLRF----------------KPSDGQTLAFQFESESNAQID 103 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 + ++T+ N + + +K + ++ + L Sbjct: 104 FTFITPNIATSGNSATQAPSQGQKTPVLMQTSGELYLKYFALKPDVWQVAGQLAKVNYQL 163 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKP------QTATNTFGVQEGFIAVLGDKSLVEQK 233 + + F + T F Q + + + + Sbjct: 164 NQATPRYADAISYPFAFQMNTLGFLSRFQFTKNIPTEAQQFVEQMLYTLQTAYPTDPKIE 223 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 + E + G DK + I ++ ++ S Sbjct: 224 WQTKEIDKTGRYQAVYKLDG-LDKKTGTATITKQKRNYLST 263 >gi|68467713|ref|XP_722015.1| hypothetical protein CaO19.11428 [Candida albicans SC5314] gi|68468032|ref|XP_721855.1| hypothetical protein CaO19.3946 [Candida albicans SC5314] gi|46443797|gb|EAL03076.1| hypothetical protein CaO19.3946 [Candida albicans SC5314] gi|46443962|gb|EAL03240.1| hypothetical protein CaO19.11428 [Candida albicans SC5314] Length = 331 Score = 44.6 bits (103), Expect = 0.051, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 63/186 (33%), Gaps = 18/186 (9%) Query: 385 STANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIY 444 +++ I+ E+ + +K +L+ + + Q+P++ + Sbjct: 121 DITSIQASSTLINMKYEQILLLSAKEARKRQKELFAKNGVQLWKNFILPAFQVPLWIMMS 180 Query: 445 KVIS-----ISLEMRH---------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 + S + H W +DL+ ADP ++F + + + Sbjct: 181 ITMRDLSGWSSWDNTHNKALDPSLYEEGILWFQDLSIADPMHVFPVILGITALCNIEWTL 240 Query: 491 GIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISI 550 + L+ + K P D + V + PA L IYW S + S+ Sbjct: 241 KTLE-LSRLTKKL--KFRPTLTDAF-GNLTKMSIVFMMAISLHAPAALTIYWISSQLYSL 296 Query: 551 VQQAVI 556 +Q ++ Sbjct: 297 LQNVMM 302 >gi|241955997|ref|XP_002420719.1| cytochrome c oxidase assembly protein, putative; mitochondrial inner membrane protein, putative [Candida dubliniensis CD36] gi|223644061|emb|CAX41804.1| cytochrome c oxidase assembly protein, putative [Candida dubliniensis CD36] Length = 331 Score = 44.6 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 57/174 (32%), Gaps = 18/174 (10%) Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-----ISL 451 + E+ + + +L+ + + Q+P++ + + S Sbjct: 133 NMKYEQILLLSAKESRNRQKELFAKNGVQLWKNFILPTFQVPLWIMMSITMRDLSGWSSW 192 Query: 452 EMRH---------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 + H W +DL+ ADP +IF + + + + L+ Sbjct: 193 DNTHNKALDPSLYEEGILWFQDLSIADPMHIFPVILGITALCNIEWTLKTLE-LSRLTKK 251 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + K P D + V + PA L IYW S S++Q ++ Sbjct: 252 L--KFRPTLTDAF-GNLTKMSIVFMMAISLHAPAALTIYWISSQFYSLLQNVMM 302 >gi|321254854|ref|XP_003193221.1| cytochrome c oxidase biogenesis-related protein [Cryptococcus gattii WM276] gi|317459690|gb|ADV21434.1| cytochrome c oxidase biogenesis-related protein, putative [Cryptococcus gattii WM276] Length = 460 Score = 44.2 bits (102), Expect = 0.063, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%) Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 A IL + + F S P+G+++YW S S VQ + Sbjct: 403 AGILRFSAIGFAMIASQMPSGVVLYWFTSLCYSFVQNFFL 442 >gi|212638599|ref|YP_002315119.1| hypothetical protein Aflv_0755 [Anoxybacillus flavithermus WK1] gi|212560079|gb|ACJ33134.1| Uncharacterized conserved protein [Anoxybacillus flavithermus WK1] Length = 198 Score = 44.2 bits (102), Expect = 0.066, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 27/74 (36%), Gaps = 2/74 (2%) Query: 6 NYFVAIALSVIIVYAWQNFYVY--PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N F+AI ++I+ + W+ + P E + + +P + + Q Sbjct: 19 NTFIAIVFALILFFGWKWLFANDRPTKETNASPQPVEVETNEPPNDEQPSETETETNEQQ 78 Query: 64 ALSMSPRVELKNPS 77 + + +P+ Sbjct: 79 SNDNVEETVVDDPN 92 >gi|238882837|gb|EEQ46475.1| hypothetical protein CAWG_04830 [Candida albicans WO-1] Length = 294 Score = 43.8 bits (101), Expect = 0.071, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 59/174 (33%), Gaps = 18/174 (10%) Query: 397 DELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVIS-----ISL 451 + E+ + +K +L+ + + Q+P++ + + S Sbjct: 96 NMKYEQILLLSAKEARKRQKELFAKNGVQLWKNFILPAFQVPLWIMMSITMRDLSGWSSW 155 Query: 452 EMRH---------APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 + H W +DL+ ADP ++F + + + + L+ Sbjct: 156 DNTHNKALDPSLYEEGILWFQDLSIADPMHVFPVILGITALCNIEWTLKTLE-LSRLTKK 214 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + K P D + V + PA L IYW S + S++Q ++ Sbjct: 215 L--KFRPTLTDAF-GNLTKMSIVFMMAISLHAPAALTIYWISSQLYSLLQNVMM 265 >gi|303316666|ref|XP_003068335.1| 60Kd inner membrane protein [Coccidioides posadasii C735 delta SOWgp] gi|240108016|gb|EER26190.1| 60Kd inner membrane protein [Coccidioides posadasii C735 delta SOWgp] Length = 277 Score = 43.8 bits (101), Expect = 0.074, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 68/229 (29%), Gaps = 51/229 (22%) Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 + + K + + +L+K +LYK I P Sbjct: 19 PLVVGWGRYFQGAVLTKAAVNRAYISPNAAEIQSQLLLRKKTKELYKRWKIRPWTRF-AP 77 Query: 434 LLQIPVFFAIYKVISISLEMRH---------------APFW-----------GWIKDLAA 467 L Q+PV+ + + + + M AP W DL A Sbjct: 78 LFQLPVWLTMMESMRRMVGMTGGLLSIVQGWLEKHPEAPNVPMVPSLSTEGALWFPDLLA 137 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGI--------WPI----IMSLSMFIQMKMSPPPADKG 515 ADP + + I P I + +M + + A Sbjct: 138 ADPYCALPVILSAAVFTNVTWGWKIKKREDIPKLPTRKERIAAHTMRVLKRTFQASA--- 194 Query: 516 QAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ PV+ S PAG++IYW S + + Q + K+ + Sbjct: 195 -----LFLCPVM---IASEVPAGMLIYWISSTLFATAQTKALPKIISTK 235 >gi|119187951|ref|XP_001244582.1| hypothetical protein CIMG_04023 [Coccidioides immitis RS] Length = 277 Score = 43.8 bits (101), Expect = 0.074, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 68/228 (29%), Gaps = 49/228 (21%) Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 + + K + + +L+K +LYK I P Sbjct: 19 PLVVGWGRYFQGAVLTKAAVNRAYISPNAAEIQSQLLLRKKTKELYKRWKIRPWTRF-AP 77 Query: 434 LLQIPVFFAIYKVISISLEMRH---------------APFW-----------GWIKDLAA 467 L Q+PV+ + + + + M AP W DL A Sbjct: 78 LFQLPVWLTMMESMRRMVGMTGGLLSIVQGWLEKHPEAPNVPMVPSLYTEGALWFPDLLA 137 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGI--------WPI----IMSLSMFIQMKMSPPPADKG 515 ADP + + I P I + +M + + Sbjct: 138 ADPYCALPVILSAAVFTNVTWGWKIKKREDIPKLPTRKERIAAHTMRVLKR-------AF 190 Query: 516 QAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 QA L PV+ S PAG++IYW S + + Q + K+ + Sbjct: 191 QASALFLCPVMIA---SEVPAGMLIYWISSTLFATAQTKALPKIISTK 235 >gi|50303879|ref|XP_451887.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|2493875|sp|P78990|COX18_KLULA RecName: Full=Mitochondrial inner membrane protein COX18; AltName: Full=Cytochrome c oxidase assembly protein 18; Flags: Precursor gi|1869938|emb|CAA72198.1| COX18 [Kluyveromyces lactis] gi|49641019|emb|CAH02280.1| KLLA0B08019p [Kluyveromyces lactis] Length = 313 Score = 43.8 bits (101), Expect = 0.078, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 62/175 (35%), Gaps = 30/175 (17%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMR----HAPFWGWIKD 464 + ++K L+K +N+ L+Q+P++ + + + R + P ++D Sbjct: 134 KEMRKRQKVLFKKYNVQMWKNSVLPLVQVPLWVTMSMGLRKLTDSRLVDTNMPHAHVLQD 193 Query: 465 LAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--------- 515 L+ T+ T G L LP + PII+ I ++ + Sbjct: 194 LSE---TSWLTHIGSLDLSLPLDAAPMLIPIILGTVSMINVEYNGKTMQATAVGTSGITT 250 Query: 516 --------QAMILNWMP------VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 + + + + + + L +YW S V S++Q ++ Sbjct: 251 ATDTQSRTSQTVNSILTATRLSTIFLIGVSTQASVLLSLYWITSQVYSLIQNRIL 305 >gi|71409239|ref|XP_806976.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70870870|gb|EAN85125.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 428 Score = 43.8 bits (101), Expect = 0.078, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 61/185 (32%), Gaps = 35/185 (18%) Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +++ + + + N + ++ + ++ A+++ + Sbjct: 170 ALRMSYIGPQISEITNNQNRVKNDRTLSSAEKRVIKDGYNRMKYALMKKHGCAQWKSFFT 229 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 + + FF+I ++ ++ AP + W+KDL DPT Sbjct: 230 MLTAPITMSAFFSIRRLAVYESDLEMAP-FLWVKDLTMPDPTYG---------------- 272 Query: 490 VGIWPIIMSLSMFIQMKMSPPPADKGQAM-----------ILNWMPVVFVFALSSFPAGL 538 P+I MF+ ++ + Q + +V V+ +S P+ + Sbjct: 273 ---LPLI-CAGMFL---VNFELNQQMQRGGRSSSGIYIRWAVRAASLVGVYMFASQPSAM 325 Query: 539 IIYWS 543 YW Sbjct: 326 FAYWI 330 >gi|156839295|ref|XP_001643340.1| hypothetical protein Kpol_472p13 [Vanderwaltozyma polyspora DSM 70294] gi|156113946|gb|EDO15482.1| hypothetical protein Kpol_472p13 [Vanderwaltozyma polyspora DSM 70294] Length = 282 Score = 43.8 bits (101), Expect = 0.081, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 17/168 (10%) Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVF----FAIYKVISISLEMRHA 456 E+ + +K +L+K +N++ L+QIP++ I K+ S + Sbjct: 107 EQITYLSMKETRKRQKKLFKKYNVDMWKNVLLPLVQIPLWVTISLGIRKLTDGSTTLIET 166 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--- 513 I D++ + + +LP L + + + MF K + D Sbjct: 167 NNIYNILDVSTDLSLALDSAPFLLPIVLGTVSLINV---EYNGIMF--NKRNFKGYDNTK 221 Query: 514 --KGQAMILNWM---PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 K IL + + S L +YW S V S++Q ++ Sbjct: 222 LSKTTQSILTVSRLGSIFMMGVSSQASILLTVYWITSQVFSLIQNYIL 269 >gi|328543718|ref|YP_004303827.1| RIP metalloprotease RseP [polymorphum gilvum SL003B-26A1] gi|326413462|gb|ADZ70525.1| RIP metalloprotease RseP [Polymorphum gilvum SL003B-26A1] Length = 378 Score = 43.8 bits (101), Expect = 0.083, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 6/117 (5%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 N+ +AI + + A+ P IE++ E Q QP + + I ++ Sbjct: 125 NFLLAIVIFAFVFAAFGRVVTSPLIEKVQPESAAEQANLQPGDLVLAVDGKPITTFSELQ 184 Query: 66 SMSPRVELKNPS-LIGSINLKGAQFDDLNLRGYHLDVSS--NSPIVTLLSPSNTKNA 119 V + L I+ KG + S N+ + LL + + Sbjct: 185 ---RIVTVSADVPLQLDIDRKGEVLRIEVTPQHREVTDSFGNTQRIGLLGVTRSPKP 238 >gi|319950636|ref|ZP_08024541.1| hypothetical protein ES5_13650 [Dietzia cinnamea P4] gi|319435711|gb|EFV90926.1| hypothetical protein ES5_13650 [Dietzia cinnamea P4] Length = 61 Score = 43.8 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 520 LNWMPV--VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 + P + +FP + +YW +N+ + VQ + M+ E+ + R Sbjct: 1 MYLFPFFPIVGAYFFNFPIAIGLYWLTNNIWTAVQSHIFMEKLEKELPMSSR 52 >gi|6321499|ref|NP_011576.1| Cox18p [Saccharomyces cerevisiae S288c] gi|1706079|sp|P53239|COX18_YEAST RecName: Full=Mitochondrial inner membrane protein COX18; AltName: Full=Cytochrome c oxidase assembly protein 18; Flags: Precursor gi|1323081|emb|CAA97064.1| COX18 [Saccharomyces cerevisiae] gi|1398937|gb|AAB03186.1| Cox18p [Saccharomyces cerevisiae] gi|151943342|gb|EDN61655.1| cytochrome C oxidase [Saccharomyces cerevisiae YJM789] gi|285812258|tpg|DAA08158.1| TPA: Cox18p [Saccharomyces cerevisiae S288c] gi|323304836|gb|EGA58594.1| Cox18p [Saccharomyces cerevisiae FostersB] Length = 316 Score = 43.8 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465 + +K +L+K +N+ ++QIP++ + I E + + W L Sbjct: 146 KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 205 Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519 ++ D P L + ++V + +M S + + Q + Sbjct: 206 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAM 265 Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + + V V + S P L +YW S + S+VQ ++ ++ Sbjct: 266 TSILNVSRLGCVVMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 313 >gi|323355023|gb|EGA86854.1| Cox18p [Saccharomyces cerevisiae VL3] Length = 316 Score = 43.8 bits (101), Expect = 0.086, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465 + +K +L+K +N+ ++QIP++ + I E + + W L Sbjct: 146 KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 205 Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519 ++ D P L + ++V + +M S + + Q + Sbjct: 206 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAM 265 Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + + V V + S P L +YW S + S+VQ ++ ++ Sbjct: 266 TSILNVSRLGCVVMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 313 >gi|228990708|ref|ZP_04150673.1| hypothetical protein bpmyx0001_14700 [Bacillus pseudomycoides DSM 12442] gi|228769234|gb|EEM17832.1| hypothetical protein bpmyx0001_14700 [Bacillus pseudomycoides DSM 12442] Length = 290 Score = 43.8 bits (101), Expect = 0.086, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 58/226 (25%), Gaps = 10/226 (4%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GY-----HLDVSSNSPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISEKGAELQSVRLKEDNTEYMWQGNPNYWGRRAPILFPIVGRLVDNIYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETKITYAVTSNQETLQKYPYEFELRVSYELDEQNIH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 + V N + ++ FS + P +F K + K Sbjct: 124 VTYEVINPTSKEMFFSIGAHPGFNCPLIEDESFTDYHLSFNGPEHLETNVLKGPFLSKEK 183 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 D + I + + A Sbjct: 184 QLMVENKTELPLTYDLFKNDALIFENMNTNEISIRSHKHNKFVKVA 229 >gi|256269091|gb|EEU04427.1| Cox18p [Saccharomyces cerevisiae JAY291] Length = 316 Score = 43.8 bits (101), Expect = 0.086, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465 + +K +L+K +N+ ++QIP++ + I E + + W L Sbjct: 146 KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 205 Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519 ++ D P L + ++V + +M S + + Q + Sbjct: 206 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAM 265 Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + + V V + S P L +YW S + S+VQ ++ ++ Sbjct: 266 TSILNVSRLGCVVMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 313 >gi|154333548|ref|XP_001563031.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134060040|emb|CAM41998.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 381 Score = 43.8 bits (101), Expect = 0.088, Method: Composition-based stats. Identities = 30/249 (12%), Positives = 76/249 (30%), Gaps = 44/249 (17%) Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 ++ I + ++ WG +F +++ +L + Sbjct: 69 VSFLQPVEKQVEIMRSLRHDGFMSLDLG-GWGHVFFFYGLCMRVLTLIPSLYSHRN---- 123 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 +++ + ++ N + ++ + ++ A+ + ++ Sbjct: 124 ----SLRMAHIGPQVSEITNSQNKVKNDRTLSSAEKRVIKDGYNRMKYALCKRHRCAQWK 179 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 + + F +I ++ ++ AP + W+KDL DPT Sbjct: 180 SFLTVLTAPITMSAFLSIRRLAMYETDLEMAP-FLWVKDLTMPDPTY------------- 225 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQ-----AMILNW------MPVVFVFALSSF 534 P I MF+ ++ + Q A + VV V+ ++ Sbjct: 226 ------ALPAI-CAGMFL---LNFEMNQRMQRGGRSASSMYVRWAVRASSVVGVYFFAAQ 275 Query: 535 PAGLIIYWS 543 P+ + YW Sbjct: 276 PSAMFAYWI 284 >gi|255723309|ref|XP_002546588.1| hypothetical protein CTRG_06066 [Candida tropicalis MYA-3404] gi|240130719|gb|EER30282.1| hypothetical protein CTRG_06066 [Candida tropicalis MYA-3404] Length = 329 Score = 43.4 bits (100), Expect = 0.092, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 60/187 (32%), Gaps = 20/187 (10%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI-----SLEMRH-------- 455 + ++K L+ + + QIP++ + + S + H Sbjct: 143 KEVRKRQKALFAKNGVQLWKNFILPAFQIPLWIIMSITMRNLSGWSSWDYTHNKALDPTL 202 Query: 456 -APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK 514 W DL ADP ++F + + + + L+ + K P D Sbjct: 203 YTEGMLWFPDLTIADPMHVFPVILGITALCNIEWTLRTLE-LSRLTKKL--KFRPTLTDA 259 Query: 515 GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTF 574 + V + PA L IYW S V S+ Q ++ I + R + Sbjct: 260 F-GNLTRLSMVFMMAISLHAPAALTIYWISSQVYSLFQNVIM--DLAFPISFTPKTRFNY 316 Query: 575 SKNYNSQ 581 K+ N Sbjct: 317 KKSKNDD 323 >gi|163789980|ref|ZP_02184415.1| hypothetical protein CAT7_10020 [Carnobacterium sp. AT7] gi|159874680|gb|EDP68749.1| hypothetical protein CAT7_10020 [Carnobacterium sp. AT7] Length = 292 Score = 43.4 bits (100), Expect = 0.093, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 70/290 (24%), Gaps = 16/290 (5%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN---SPIVTLLSPSNTKNAYFAEL 124 L+N L+ I KGA+ + + Y + S L N Y Sbjct: 3 TLENEQLLIKIATKGAELQKIYNKQENFDYLWTGDPDFWGSHAPNLFPTIGRLNDYKYTK 62 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTP--TTPIKLVFKNANNILFERTISLD-EHYLFK 181 D + + + + T K F IS + E K Sbjct: 63 DGKTYELPQHGFAKDLEFEVAESSDTTAVFVLKSTDETKAMYPYNFSLAISYNLEGSKLK 122 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 VTN S + + FS G + P T+ I + + E + Sbjct: 123 TTYQVTNESTETMPFSIGGHPAFNIPMNGEGTYDDYTLTIDPKKEVNYFESNPVPYRSGN 182 Query: 242 ISNF-HESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT----- 295 F N L ++ + + I E + + + S Sbjct: 183 KKPFKDMENGVLSMNHETFRDGLIIIDEPTIETVTLSSPNSKHGVTLGISEFPYLCLWTK 242 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 + I E+ I E + I Sbjct: 243 EQMDAPFICIEPFYGLPDVIGEIGTLEEKEGIILLEASEQKEVSFTITTF 292 >gi|259415121|ref|ZP_05739043.1| PEP-utilising enzyme, mobile region [Silicibacter sp. TrichCH4B] gi|259349031|gb|EEW60785.1| PEP-utilising enzyme, mobile region [Silicibacter sp. TrichCH4B] Length = 1353 Score = 43.4 bits (100), Expect = 0.097, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 82/246 (33%), Gaps = 38/246 (15%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + G + + + + + +N ++ + +++ P+A K +++ + Sbjct: 400 QESGLWDKAIQGITQALIWGHNKSHLLLSLLV-MALISRIMVLPIALKSERDQIKLRDHK 458 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 +++EL+ P +A+ Y H + P+ +L + + S + Sbjct: 459 TELNELKS-TLAHDPMRKARAIRGFYAKHGLTPMRNMAALLFLPLMMLGLQAAERASSGI 517 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV------GIWPIIMSLSMFIQMKM 507 + WI DL A DP I L + + + + + + Sbjct: 518 --VEGFLWIADLGAPDPLWIAPALTCALAGLYLVLAIAKSRRSAVLWLGLGV-------- 567 Query: 508 SPPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI---MKMHGAEI 564 P +FV + AG +Y S + + Q + + G ++ Sbjct: 568 ----------------PALFVLTMGLSAAG-NLYLCMSLIGLLAQYLFVSGTFRRIGHKL 610 Query: 565 GLIDRL 570 ++ RL Sbjct: 611 RMLSRL 616 >gi|189196594|ref|XP_001934635.1| predicted protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187980514|gb|EDU47140.1| predicted protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 334 Score = 43.4 bits (100), Expect = 0.099, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 40/108 (37%), Gaps = 19/108 (17%) Query: 459 WGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM 518 W DL DPT G+LPF G +M S F SPP K + Sbjct: 220 MLWFPDLLIPDPT------GMLPFIASG---------LM-FSNFFFTNNSPPTGAKWPTI 263 Query: 519 I---LNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 I L + + + PA L++YW S I+ + +M+ Sbjct: 264 IRRTLLFASLCIGPLCQNLPAALMLYWCSSTTSVILWNVWLDRMYPVP 311 >gi|71064048|gb|AAZ22475.1| Cox18p [Saccharomyces cerevisiae] Length = 316 Score = 43.4 bits (100), Expect = 0.099, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465 + +K +L+K +N+ ++QIP++ + I E + + W L Sbjct: 146 KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 205 Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519 ++ D P L + ++V + +M S + + Q + Sbjct: 206 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAM 265 Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + + V V + S P L +YW S + S+VQ ++ ++ Sbjct: 266 TSILNVSRLGCVVMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 313 >gi|260578639|ref|ZP_05846548.1| membrane protein OxaA [Corynebacterium jeikeium ATCC 43734] gi|258603267|gb|EEW16535.1| membrane protein OxaA [Corynebacterium jeikeium ATCC 43734] Length = 336 Score = 43.4 bits (100), Expect = 0.100, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 100/299 (33%), Gaps = 84/299 (28%) Query: 317 TIHHYEKDLAIPRF-EMLIDWGWFYFIAKPMFMLMSYFYNLV---------GNFGIAIML 366 + +P+ M + P+ + + ++ L ++ +A++L Sbjct: 5 VLRFRGFPYRVPQLPSMAGKLTSMKIVEYPVALFLKAWHYLFADIFGWDAAQSWLLALVL 64 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA----MIQLYKTH 422 V V+ L P +Q S+ + NI+PK+ L +++ +K +L K H Sbjct: 65 LIVTVRSLLLPFVYRQSYSSRILVNIRPKVYRLEQEYSDDKSAEGRKELGKRRRELQKEH 124 Query: 423 NINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 GC P L+QIPV +Y+++ + + DP ++ G P Sbjct: 125 EYRFSDGCIPALIQIPVLLGLYRMLIH---------------VTSPDPEINASVNGFGPL 169 Query: 483 Y---LPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQ-------AMI---------- 519 + + ++ + M+ ++QM S K Q I Sbjct: 170 NAEEVQSLLSAKLFGVPMAA--YVQMADSQFAEIHTTKEQVFWVVFPMAILAAIFTTSNW 227 Query: 520 -----------------------LNWM--PVVFV-FALSSF----PAGLIIYWSWSNVI 548 + W+ PVV + + P L+IYW +N+ Sbjct: 228 GYSMYRNYLTVDHNSGLARGLLKMMWLIGPVVLLAPFTIALGAVGPVALMIYWVGNNLW 286 >gi|228996810|ref|ZP_04156444.1| hypothetical protein bmyco0003_13950 [Bacillus mycoides Rock3-17] gi|229004486|ref|ZP_04162227.1| hypothetical protein bmyco0002_14410 [Bacillus mycoides Rock1-4] gi|228756771|gb|EEM06075.1| hypothetical protein bmyco0002_14410 [Bacillus mycoides Rock1-4] gi|228762871|gb|EEM11784.1| hypothetical protein bmyco0003_13950 [Bacillus mycoides Rock3-17] Length = 290 Score = 43.4 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 58/226 (25%), Gaps = 10/226 (4%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GY-----HLDVSSNSPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISEKGAELQSVRLKEDNTEYMWQGNPNYWGRRAPILFPIVGRLVDNIYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETKITYAVTSNQETLQKYPYEFELRVSYELDEQNIH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 + V N + ++ FS + P +F K + K Sbjct: 124 VTYEVINPTSKEMFFSIGAHPGFNCPLIEGESFTDYHLSFNGPEHLETNVLKGPFLSKEK 183 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 D + I + + A Sbjct: 184 QLMVENKTELPLTYDLFKNDALIFENMNTNEISIRSHKHNKFVKVA 229 >gi|312278739|gb|ADQ63396.1| Serine/threonine protein kinase [Streptococcus thermophilus ND03] Length = 623 Score = 43.4 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 19/185 (10%), Positives = 53/185 (28%), Gaps = 17/185 (9%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 + II++A+ F ++ N + + T + + + + +++ Sbjct: 344 VLLGFVFIGIIIFAYLVFTNPDNVQVPNVVGQELSTAQTKLESAGFKVGDVKEVENDSVN 403 Query: 67 MSPRVELKNPSLIGSINLKGAQFD--------DLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 +K G++ +GA D L+ Y ++ + + Sbjct: 404 KGK--VIKTDPTAGTMRKEGASIDVYVSSGSKGFTLKNYKGKNYKDA-------IEDLTS 454 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 Y D + + + S + P K + + I++ + Sbjct: 455 NYGVSEDQIDIQHVEDDNAKEGEILSQSSEKNKSFNPKDSKAKIKFRVATPKPITMPDVT 514 Query: 179 LFKIV 183 + Sbjct: 515 GLTVS 519 >gi|116628133|ref|YP_820752.1| serine/threonine kinase protein [Streptococcus thermophilus LMD-9] gi|116101410|gb|ABJ66556.1| serine/threonine protein kinase [Streptococcus thermophilus LMD-9] Length = 623 Score = 43.4 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 19/185 (10%), Positives = 53/185 (28%), Gaps = 17/185 (9%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 + II++A+ F ++ N + + T + + + + +++ Sbjct: 344 VLLGFVFIGIIIFAYLVFTNPDNVQVPNVVGQELSTAQTKLESAGFKVGDVKEVENDSVN 403 Query: 67 MSPRVELKNPSLIGSINLKGAQFD--------DLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 +K G++ +GA D L+ Y ++ + + Sbjct: 404 KGK--VIKTDPTAGTMRKEGASIDVYVSSGSKGFTLKNYKGKNYKDA-------IEDLTS 454 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 Y D + + + S + P K + + I++ + Sbjct: 455 NYGVSEDQIDIQHVEDDNAKEGEILSQSSEKNKSFNPKDSKAKIKFRVATPKPITMPDVT 514 Query: 179 LFKIV 183 + Sbjct: 515 GLTVS 519 >gi|310657633|ref|YP_003935354.1| hypothetical protein CLOST_0319 [Clostridium sticklandii DSM 519] gi|308824411|emb|CBH20449.1| protein of unknown function [Clostridium sticklandii] Length = 342 Score = 43.4 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 61/195 (31%), Gaps = 19/195 (9%) Query: 4 NWN--YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 N +AL VI+++ ++ + E N + Q NQ + + + Sbjct: 76 KRNSGVIAVVALLVIVIFGGGYWFFSQKGENDNIADQPNQNADSSNQNSEASNEGTGETQ 135 Query: 62 AQALSMSP------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 L+ S R L P + Y ++ + P+ Sbjct: 136 QTELTSSQLDLTKARTYLSTPGYKSTF-----------FVNYPDGMAGVVERFSGRGPNA 184 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + +E++ V + V + +TP ++ +++ +T S + Sbjct: 185 NEGVIVSEVEVVRENGEDYGYGFHYVTRQDGSYYILDSTPFEIYSHLKDDLSIGKTWSYE 244 Query: 176 EHYLFKIVDTVTNNS 190 + IV TV + Sbjct: 245 DEVFGDIVWTVMDMG 259 >gi|210614343|ref|ZP_03290162.1| hypothetical protein CLONEX_02376 [Clostridium nexile DSM 1787] gi|210150687|gb|EEA81696.1| hypothetical protein CLONEX_02376 [Clostridium nexile DSM 1787] Length = 217 Score = 43.4 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 4/97 (4%) Query: 357 VGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI 416 + N G++I++ TV V L P+ KQ + + P+I ++++K+K Q M Sbjct: 36 IENIGLSIIIFTVIVYTLMIPMTIKQQKFSRMSAVMNPEIQKIQKKYKNKKDQASMMKMQ 95 Query: 417 QLYK----THNINPLAGCWPILLQIPVFFAIYKVISI 449 + K + +P GC L+Q P+ FA++ VI Sbjct: 96 EETKLVYEKYGTSPTGGCLGSLIQFPILFALWPVIQN 132 >gi|320038141|gb|EFW20077.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 277 Score = 43.1 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 66/229 (28%), Gaps = 51/229 (22%) Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPI 433 + + K + + +L+K +LYK I P Sbjct: 19 PLVVGWGRYFQGAVLTKAAVNRAYISPNAAEIQSQLLLRKKTKELYKRWKIRPWTRF-AP 77 Query: 434 LLQIPVFFAIYKVISISLEMRH--------------------------APFWGWIKDLAA 467 L Q+PV+ + + + + M W DL A Sbjct: 78 LFQLPVWLTMMESMRRMVGMTGGLLSIVQGWLEKHPEVPNVPMVPSLSTEGALWFPDLLA 137 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGI--------WPI----IMSLSMFIQMKMSPPPADKG 515 ADP + + I P I + +M + + A Sbjct: 138 ADPYCALPVILSAAVFTNVTWGWKIKKREDIPKLPTRKERIAAHTMRVLKRTFQASA--- 194 Query: 516 QAMILNWM-PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 ++ PV+ S PAG++IYW S + + Q + K+ + Sbjct: 195 -----LFLCPVM---IASEVPAGMLIYWISSTLFATAQTKALPKIISTK 235 >gi|170780887|ref|YP_001709219.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] gi|169155455|emb|CAQ00563.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] Length = 255 Score = 43.1 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 1/91 (1%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 G+A++L T+ V+ + P+ Q + I P + ELR + P Q+ + A+ +LY Sbjct: 36 TGVAVILLTLVVRAVLVPVGVAQVRAEIQRLRIAPALAELRRRHAGKPEQMSR-AVQELY 94 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 +PLAGC P L Q PV A+Y + + + Sbjct: 95 AREGASPLAGCLPTLAQAPVLAAVYTLFAHA 125 >gi|322388104|ref|ZP_08061710.1| hypothetical protein HMPREF9423_1108 [Streptococcus infantis ATCC 700779] gi|321141125|gb|EFX36624.1| hypothetical protein HMPREF9423_1108 [Streptococcus infantis ATCC 700779] Length = 416 Score = 43.1 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 22/242 (9%), Positives = 65/242 (26%), Gaps = 7/242 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M++N ++ + L + I + F + + + +K + + + Sbjct: 1 MKKNAILYLGVVLLLAIFLLFSLFINRKESKRQEVQSTTTEVIKSDFEDISGDYISSTGE 60 Query: 61 RAQALSMSP--RVELKNP--SLIGSINL---KGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 +A + R+ ++ G + K D + + I L++ Sbjct: 61 KATVAKNNQNWRISYNTDEGNVFGDFSTDWKKDGNNRSSVTEFNKSDGNKDFKISILVNN 120 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + + + N E+ ++ + K + +N E+ I+ Sbjct: 121 VDDSSNILTVITLSDGNKNHEMVFASRTDYFKNSKDNILQGDLSDFKGTYSNDNLEKAIA 180 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 L+ I + + + + + + + Sbjct: 181 ESNFTLYGYKREDYYKGITSVFPRLSYQDGYWMFWSGSMHAQFKLDKSKKPKKINDYYEV 240 Query: 234 YS 235 Y Sbjct: 241 YF 242 >gi|294865723|ref|XP_002764473.1| cytochrome oxidase biogenesis protein, putative [Perkinsus marinus ATCC 50983] gi|239863945|gb|EEQ97190.1| cytochrome oxidase biogenesis protein, putative [Perkinsus marinus ATCC 50983] Length = 279 Score = 43.1 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 77/234 (32%), Gaps = 53/234 (22%) Query: 376 FPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN-PLAGCWPIL 434 + + + + ++ E +K Q Q Q K H + G + Sbjct: 1 MRAGRIKQRIMPQLDALSAEMKEAEKKGSQQQLIRAQTKYSQFIKEHGSMVTMKGMMGMF 60 Query: 435 LQIPVF----FAIYKVISISLEMRHAPF--WGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 +QIP+F ++ ++ + + P W+ LA +DP Sbjct: 61 VQIPIFTTAFLSMRQMSNHPHIFKGFPMETPLWLDSLALSDP------------------ 102 Query: 489 HVGIWPIIMSLSM-----FIQMKMSPPPADK------------GQAMILNW-------MP 524 + + P++ S + F S A+ Q + + + Sbjct: 103 -IIVLPVLASALLLTNIEFFGSLDSAQAAEAGDRPDTKNKLGIDQKTMQKYSRHGFRALC 161 Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE--IGLIDRLRSTFSK 576 V+ + A PAGL +Y + + +I Q I+++ E + + ++ K Sbjct: 162 VIALPATMYLPAGLFVYTCTNALWAITQNR-ILRLPIVEQALNIPHNIKKEEKK 214 >gi|55821411|ref|YP_139853.1| protein kinase [Streptococcus thermophilus LMG 18311] gi|55823336|ref|YP_141777.1| protein kinase [Streptococcus thermophilus CNRZ1066] gi|55737396|gb|AAV61038.1| protein kinase [Streptococcus thermophilus LMG 18311] gi|55739321|gb|AAV62962.1| protein kinase [Streptococcus thermophilus CNRZ1066] Length = 623 Score = 43.1 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 20/185 (10%), Positives = 54/185 (29%), Gaps = 17/185 (9%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 + II++A+ F ++ N + + T + + + + +++ Sbjct: 344 VLLGFVFIGIIIFAYLVFTNPDNVQVPNVVGQELSTAQTKLESAGFKVGDVKEVENDSVN 403 Query: 67 MSPRVELKNPSLIGSINLKGAQFD--------DLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 +K G++ +GA D L+ Y ++ + + Sbjct: 404 KGK--VIKTDPTAGTMRKEGASIDVYVSSGSKGFTLKNYKGKNYKDA-------IEDLTS 454 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 Y D + + + S + P K + +TI++ + Sbjct: 455 NYGVSEDQIDIQHVEDDNAKEGEILSQSSEKNKSFNPKDSKAKIKFRVATPKTITMPDVT 514 Query: 179 LFKIV 183 + Sbjct: 515 GLTVS 519 >gi|71004786|ref|XP_757059.1| hypothetical protein UM00912.1 [Ustilago maydis 521] gi|46096863|gb|EAK82096.1| hypothetical protein UM00912.1 [Ustilago maydis 521] Length = 428 Score = 43.1 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 509 PPPADKGQAMILN----WMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 P + +A I+ M + F+ P+ L+IYW S + +++Q +++ Sbjct: 354 PEDDEPPRARIMTNALRIMAIAFIPIACQAPSILVIYWLSSGIYTLLQNSIL 405 >gi|238060836|ref|ZP_04605545.1| membrane protein [Micromonospora sp. ATCC 39149] gi|237882647|gb|EEP71475.1| membrane protein [Micromonospora sp. ATCC 39149] Length = 299 Score = 43.1 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%) Query: 364 IMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHN 423 I+L T+ V+LL PL Q + P++ +LR + + P LQ + LY++ Sbjct: 77 IVLFTIAVRLLISPLTLAQVRGERRRAVLAPQVRDLRRRHA-ADPARLQGELFALYRSAG 135 Query: 424 INPLAGCWPILLQIPVFFAIYKVISI 449 +P+AGC P LLQ P F +Y++ S Sbjct: 136 ASPVAGCLPALLQAPFFLVMYRLFST 161 >gi|68535167|ref|YP_249872.1| putative preprotein translocase subunit [Corynebacterium jeikeium K411] gi|68262766|emb|CAI36254.1| putative preprotein translocase subunit [Corynebacterium jeikeium K411] Length = 309 Score = 43.1 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 91/263 (34%), Gaps = 74/263 (28%) Query: 343 AKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 A + ++ ++ +A++L V V+ L P +Q S+ + NI+PK+ L ++ Sbjct: 14 AWHYLFADIFGWDAAQSWLLALVLLIVTVRSLLLPFVYRQSYSSRILVNIRPKVYRLEQE 73 Query: 403 FKQSPPQVLQKA----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPF 458 + +K +L K H GC P L+QIPV +Y+++ Sbjct: 74 YSDDKSAEGRKELGKRRRELQKEHEYRFSDGCIPALIQIPVLLGLYRMLIH--------- 124 Query: 459 WGWIKDLAAADPTNIFTLFGILPFY---LPGFMHVGIWPIIMSLSMFIQMKMSPPP---A 512 + + DP ++ G P + + ++ + M+ ++QM S Sbjct: 125 ------VTSPDPEINASVNGFGPLNAEEVQSLLSAKLFGVPMAA--YVQMADSQFAEIHT 176 Query: 513 DKGQ-------AMI---------------------------------LNWM--PVVFV-F 529 K Q I + W+ PVV + Sbjct: 177 TKEQVFWVVFPMAILAAIFTTSNWGYSMYRNYLTVDHNSGLARGLLKMMWLIGPVVLLAP 236 Query: 530 ALSSF----PAGLIIYWSWSNVI 548 + P L+IYW +N+ Sbjct: 237 FTIALGAVGPVALMIYWVGNNLW 259 >gi|224168586|ref|XP_002198909.1| PREDICTED: hypothetical protein, partial [Taeniopygia guttata] Length = 199 Score = 43.1 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 38/108 (35%), Gaps = 9/108 (8%) Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 + ++ + + + +++ + +LY N +P + +Q+P++ Sbjct: 85 AQRLRYEVSARGKQLGWSEKVARLHFARNMRRIVTELYIRDNCHPFKATLLLWVQVPMWV 144 Query: 442 AIYKVISI-SLEMRH--------APFWGWIKDLAAADPTNIFTLFGIL 480 + + S+ R + W DL A D T I + L Sbjct: 145 CVSLALRNCSVGARGSAVQEQFSSGGALWFTDLTAPDSTWILPVSLGL 192 >gi|157865754|ref|XP_001681584.1| hypothetical protein [Leishmania major strain Friedlin] gi|68124881|emb|CAJ02994.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 407 Score = 42.7 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 28/249 (11%), Positives = 73/249 (29%), Gaps = 44/249 (17%) Query: 306 NFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM 365 ++ I + F++ WG +F +++ +L + Sbjct: 95 VSFLQPVEKQVEIMRSLRHDGFMSFDLG-GWGHVFFFYGLCMRVLTLIPSLYSHRN---- 149 Query: 366 LTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 +++ + + N + ++ + ++ + + + Sbjct: 150 ----SLRMAHIGPQISEITNNQNKAKNDRTLSSAEKRVIKDGYNRMKYVLCKKHNCSQWK 205 Query: 426 PLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLP 485 + + + F +I ++ ++ AP + W+KDL DPT Sbjct: 206 SFLTTLTMPITMSAFLSIRRLAMYETDLEMAP-FLWVKDLTMPDPTY------------- 251 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-----------ILNWMPVVFVFALSSF 534 P I MF+ ++ + Q + VV ++ + Sbjct: 252 ------ALPAI-CAGMFL---LNFEMNQRMQRGGRSASGLYVRWAVRASSVVGIYFFAGQ 301 Query: 535 PAGLIIYWS 543 P+ + YW Sbjct: 302 PSAMFAYWI 310 >gi|207345181|gb|EDZ72082.1| YGR062Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 216 Score = 42.7 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465 + +K +L+K +N+ ++QIP++ + I E + + W L Sbjct: 46 KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 105 Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519 ++ D P L + ++V + +M S + + Q + Sbjct: 106 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAM 165 Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + + V V + S P L +YW S + S+VQ ++ ++ Sbjct: 166 TSILNVSRLGCVVMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 213 >gi|218262803|ref|ZP_03477161.1| hypothetical protein PRABACTJOHN_02841 [Parabacteroides johnsonii DSM 18315] gi|218223135|gb|EEC95785.1| hypothetical protein PRABACTJOHN_02841 [Parabacteroides johnsonii DSM 18315] Length = 74 Score = 42.7 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Query: 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKNYNS 580 GL Y+ S +I+I+Q +I + E L+ +L K Sbjct: 1 GLTYYYFISTLITILQT-IIFRYTIDEDKLLAKLEENKKKPMKK 43 >gi|322825862|gb|EFZ30698.1| hypothetical protein TCSYLVIO_3006 [Trypanosoma cruzi] Length = 428 Score = 42.7 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 43/119 (36%), Gaps = 1/119 (0%) Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +++ + + + N + ++ + ++ A+++ + Sbjct: 170 ALRMSYIGPQISEITNNQNRVKNDRTLSTAEKRVIKDGYNRMKYALMKKHGCAQWKSFFT 229 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 + + FF+I ++ ++ AP + W+KDL DPT L F + + Sbjct: 230 MLTAPITMSAFFSIRRLAVYESDLEMAP-FLWVKDLTMPDPTYGLPLICAGMFLVNFEL 287 >gi|71666514|ref|XP_820215.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70885551|gb|EAN98364.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 428 Score = 42.3 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 43/119 (36%), Gaps = 1/119 (0%) Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 +++ + + + N + ++ + ++ A+++ + Sbjct: 170 ALRMSYIGPQISEITNNQNRVKNDRTLSTAEKRVIKDGYNRMKYALMKKHGCAQWKSFFT 229 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 + + FF+I ++ ++ AP + W+KDL DPT L F + + Sbjct: 230 MLTAPITMSAFFSIRRLAVYESDLEMAP-FLWVKDLTMPDPTYGLPLICAGMFLVNFEL 287 >gi|212528340|ref|XP_002144327.1| mitochondrial export translocase Oxa2, putative [Penicillium marneffei ATCC 18224] gi|210073725|gb|EEA27812.1| mitochondrial export translocase Oxa2, putative [Penicillium marneffei ATCC 18224] Length = 340 Score = 42.3 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 76/244 (31%), Gaps = 48/244 (19%) Query: 379 AKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIP 438 KK Y K+++ ++ ++ Q + K I +YK NI P + LLQIP Sbjct: 100 MKKHYEDAIRAKHLEDRLHMRDRAAEKQMAQEMHKRAIAVYKEWNI-PTYPQYLPLLQIP 158 Query: 439 VFFAIYKVISI----------------------SLEMRHAPFW------GWIKDLAAADP 470 ++ ++ + I ++ + W DL A D Sbjct: 159 IWLSLMEGIRNMCGVNMGLLRYFVPASNGNGGHAVNLPGMEPSLANEGALWFPDLLAGDS 218 Query: 471 TNIFTLFGILPFYLPGFMHVGIWPIIMSL--SMFIQMKMSPPPADKGQAMILNWMPVVFV 528 T I L L + S+F M + + V + Sbjct: 219 TYILPLILSLSIIANVRTGFKTMSFAEASDHSIFRMATMVSAVT------MKQLLTVGAL 272 Query: 529 FALSS-----FPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLID------RLRSTFSKN 577 + + PAG+++YW S + +Q + K A L R+ K Sbjct: 273 WIGYTASVTGMPAGMMLYWIASTNTATLQAWFLDKFLFASKPLSGLQGMHVRVLKPGEKK 332 Query: 578 YNSQ 581 + Sbjct: 333 PPVK 336 >gi|22655125|gb|AAM98153.1| unknown protein [Arabidopsis thaliana] Length = 426 Score = 42.3 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 56/145 (38%), Gaps = 34/145 (23%) Query: 427 LAGCWPILLQIPVFFAIYKVISISLEMRHAPFW-----GWIKDLAAADPTNIFTLFGILP 481 L + +Q+P FF + I + P + W ++L+ Sbjct: 68 LWFFPYLSVQLPCFFLLMASIRKM-SLDGHPGFDSGGVLWFQNLS--------------- 111 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAM-----ILNW-------MPVVFVF 529 LPG ++PI+++ +I +++S + Q ++ + + V F Sbjct: 112 -DLPGGSFGPVFPILIATFHYINIQISFDTSTIRQTTGLTGLLMRYYKLYLEILSVPLFF 170 Query: 530 ALSSFPAGLIIYWSWSNVISIVQQA 554 + P G ++YW ++ ++I QQ Sbjct: 171 VGYAIPQGSLVYWVTNSSVNIFQQL 195 >gi|154297723|ref|XP_001549287.1| hypothetical protein BC1G_12273 [Botryotinia fuckeliana B05.10] gi|150858402|gb|EDN33594.1| hypothetical protein BC1G_12273 [Botryotinia fuckeliana B05.10] Length = 325 Score = 41.9 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 73/229 (31%), Gaps = 23/229 (10%) Query: 345 PMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFK 404 L + V F + I K + + ++IQ + Sbjct: 67 FTLPLTALAIRTVLIFPLGINSRRAAQKQIDLMPLMNAWQHQFRKQSIQEVGHLGPDAAN 126 Query: 405 QSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKD 464 Q + K +LY ++ LQ+PV+ + I H WI+ Sbjct: 127 QFVKDKMNKKKRELYSRYSCGTWKHYL-PFLQLPVWMIAVETIRKMCG-AHDGLLKWIES 184 Query: 465 L---------AAADPTNIFTLFGILPFYLPGFMHVG---------IWPIIMSLSMFIQMK 506 L AA ++ +L F G + I P ++S S+ + + Sbjct: 185 LFISSKANEAAATTDLDLGSLLLEPTFATEGALWFPNLLISDPMLILPFMLSGSILLNLT 244 Query: 507 MSPPPADKGQAMIL---NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 P ++ + + + P+ +++YW+ S++++ Q Sbjct: 245 GQGKPKSVFMKRLMNSLKVVALAIIPLTLQMPSAMLVYWTSSSLLAFGQ 293 >gi|153825479|ref|ZP_01978146.1| hypothetical protein A5A_1930 [Vibrio cholerae MZO-2] gi|149740891|gb|EDM54976.1| hypothetical protein A5A_1930 [Vibrio cholerae MZO-2] Length = 568 Score = 41.9 bits (96), Expect = 0.28, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 69/222 (31%), Gaps = 6/222 (2%) Query: 5 WNYFVA--IALSVIIVYAWQNFYVYPRIEEMNN----ERKNIQTVKQPNQVDNSYAAVLI 58 + I L V +++++ F+ E+ K +N+Y + Sbjct: 2 KKIIILYTIGLLVSLIFSYYFFFNNHNQEKHQQGLYYTESYDSVTKNKKADENAYKTYDV 61 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + ++ + ++ K + ++ D + +S+ + L KN Sbjct: 62 KLTSTLINGTEKINQKLDNFKMKLHFSDGIIQDGTVYDITTSETSDEIPIYLPFTYKYKN 121 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 F ++ + + + +L T+ N S T + + I E + Sbjct: 122 GLFQDISLLDLSPDHKLNLIQTILNDFSYSTSTDEVVLNSAYMERKYIYNENAKQVTRKK 181 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + ++ +++ P+ T+ F + F Sbjct: 182 IIVTDHNDNSDILNEHENWLLSLNDDGTPRDLTSYFYKEINF 223 >gi|90076410|dbj|BAE87885.1| unnamed protein product [Macaca fascicularis] Length = 253 Score = 41.9 bits (96), Expect = 0.28, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 8/127 (6%) Query: 339 FYFIAKPMFMLMSYFY-NLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + + L+ + + +L + AI TVF + L FPL A + N P+I Sbjct: 118 SHTPVGLVQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPLIVVGQREAAKIHNHLPEIQ 177 Query: 398 ELREKFKQSPPQVLQKAMIQ-------LYKTHNINPLAGCWPILLQIPVFFAIYKVISIS 450 + + +++ + K H I L Q P+F + + + Sbjct: 178 KFSSRVREAKLAGDDTEFYKASSEVALYQKKHGIKLFKPLILPLTQAPIFLSFFIALREM 237 Query: 451 LEMRHAP 457 + A Sbjct: 238 ANLPVAS 244 >gi|239633948|gb|ACR84160.1| oxidase assembly 1-like protein [Lepus granatensis] gi|239633950|gb|ACR84161.1| oxidase assembly 1-like protein [Lepus granatensis] gi|239633952|gb|ACR84162.1| oxidase assembly 1-like protein [Lepus granatensis] gi|239633954|gb|ACR84163.1| oxidase assembly 1-like protein [Lepus granatensis] gi|239633956|gb|ACR84164.1| oxidase assembly 1-like protein [Lepus granatensis] gi|239633958|gb|ACR84165.1| oxidase assembly 1-like protein [Lepus granatensis] gi|239633960|gb|ACR84166.1| oxidase assembly 1-like protein [Lepus granatensis] gi|239633964|gb|ACR84168.1| oxidase assembly 1-like protein [Lepus europaeus] gi|239633966|gb|ACR84169.1| oxidase assembly 1-like protein [Lepus europaeus] gi|239633968|gb|ACR84170.1| oxidase assembly 1-like protein [Lepus europaeus] gi|239633970|gb|ACR84171.1| oxidase assembly 1-like protein [Lepus europaeus] gi|239633974|gb|ACR84173.1| oxidase assembly 1-like protein [Lepus europaeus] gi|239633976|gb|ACR84174.1| oxidase assembly 1-like protein [Lepus castroviejoi] gi|239633978|gb|ACR84175.1| oxidase assembly 1-like protein [Lepus castroviejoi] gi|239633980|gb|ACR84176.1| oxidase assembly 1-like protein [Lepus castroviejoi] gi|239633982|gb|ACR84177.1| oxidase assembly 1-like protein [Lepus castroviejoi] gi|239633984|gb|ACR84178.1| oxidase assembly 1-like protein [Lepus castroviejoi] gi|239633986|gb|ACR84179.1| oxidase assembly 1-like protein [Lepus castroviejoi] gi|239633988|gb|ACR84180.1| oxidase assembly 1-like protein [Lepus timidus] gi|239633990|gb|ACR84181.1| oxidase assembly 1-like protein [Lepus timidus] gi|239633992|gb|ACR84182.1| oxidase assembly 1-like protein [Lepus timidus] gi|239633994|gb|ACR84183.1| oxidase assembly 1-like protein [Lepus timidus] gi|239633996|gb|ACR84184.1| oxidase assembly 1-like protein [Lepus timidus] gi|239633998|gb|ACR84185.1| oxidase assembly 1-like protein [Lepus timidus] Length = 83 Score = 41.9 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 23/97 (23%) Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDL 465 M K H+I L L Q P+F + + + + W +DL Sbjct: 2 KASSEMTLYQKKHDIKLLRPLILPLTQAPIFISFFIALREMANLPVPSLQTGGLWWFQDL 61 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 DPT I P++++ +M+ Sbjct: 62 TVCDPTY-------------------ILPMVVTATMW 79 >gi|152975121|ref|YP_001374638.1| aldose 1-epimerase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023873|gb|ABS21643.1| Aldose 1-epimerase [Bacillus cytotoxicus NVH 391-98] Length = 290 Score = 41.9 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 62/226 (27%), Gaps = 10/226 (4%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y +N +P++ + + Y+ Sbjct: 4 TIQNEKVIVSISEKGAELQSIRLKEDNTEYLWQGDANYWGRRAPLLFPIVGRLVDHTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + E Sbjct: 64 DGTAYSLTQHGFARDLPFSIKEQSETTITYIVTSNAETLQKYPYEFELFVSYELEGQTLH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 + V N S ++ FS + P + +F + + K Sbjct: 124 VTYNVHNPSSQEMFFSIGAHPGFNCPLVESTSFTDYYLAFRGPEYLETSILEGPFLSKEK 183 Query: 242 ISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 ++ D + I + + Sbjct: 184 QLIVDHASELPLTYDLFKNDALIFENMNTNEIAIRSHKHNKFVKVT 229 >gi|328702388|ref|XP_001951979.2| PREDICTED: mitochondrial inner membrane protein COX18-like [Acyrthosiphon pisum] Length = 103 Score = 41.9 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 23/55 (41%) Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE 563 P K I + ++ + P+G+ +YW+ S++ + Q ++ + Sbjct: 20 PTRNQKIITNIFRGLTIIMMPLSCFLPSGVSLYWTASSIYGLSQNLFLLSPQVRK 74 >gi|50083799|ref|YP_045309.1| hypothetical protein ACIAD0563 [Acinetobacter sp. ADP1] gi|49529775|emb|CAG67487.1| conserved hypothetical protein [Acinetobacter sp. ADP1] Length = 233 Score = 41.9 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 35/112 (31%), Gaps = 6/112 (5%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV----LIDDRA 62 I +++I + WQ + E K Q + Q + + A+ D+ Sbjct: 24 IISGILIALIAFFGWQYWQKKTLAENQTRTAKVQQLIDQAQAAEANPDALNNLYAAADKI 83 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLN--LRGYHLDVSSNSPIVTLLS 112 + ++ L+ I + L+ ++ +V L+ Sbjct: 84 VKDAPDSIQAVQTEFLLAKIAYDKGDYATAEKSLKKIENSKINDEGLVQLIK 135 >gi|332982122|ref|YP_004463563.1| peptidase S1 and S6 chymotrypsin/Hap [Mahella australiensis 50-1 BON] gi|332699800|gb|AEE96741.1| peptidase S1 and S6 chymotrypsin/Hap [Mahella australiensis 50-1 BON] Length = 379 Score = 41.9 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 26/84 (30%), Gaps = 8/84 (9%) Query: 1 MERNWNYFVAI------ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYA 54 M ++ + I ALS I+ W Y ++ + + + N +D Sbjct: 12 MLKSKRMTIFITALVSVALSFIVFTLWMG-YNKSPVQRPQSTAQEEASADDDNALDGVTP 70 Query: 55 AVLIDDRAQALSMSPRVELKNPSL 78 V A + RV + Sbjct: 71 IVRKAAPAVVGISTTRVT-ETDMF 93 >gi|325679510|ref|ZP_08159090.1| hypothetical protein CUS_5876 [Ruminococcus albus 8] gi|324108797|gb|EGC03033.1| hypothetical protein CUS_5876 [Ruminococcus albus 8] Length = 332 Score = 41.9 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 31/99 (31%), Gaps = 12/99 (12%) Query: 1 MERNWNYF-------VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53 M N N + I L +I+ + + P+ + ++ ++N Q+ + S Sbjct: 9 MNDNRNDIAKASRFALGIILGAVILIGVIFYGIAPKTRKKDDTKQNTQSAPAAQKQTQSP 68 Query: 54 AAVL---IDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89 +++ + + G + G Sbjct: 69 PPQTEVPVEEEPLEIPQGHLYRVSTD--TGVTDKDGGYI 105 >gi|187933640|ref|YP_001887018.1| hypothetical protein CLL_A2831 [Clostridium botulinum B str. Eklund 17B] gi|187721793|gb|ACD23014.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund 17B] Length = 345 Score = 41.9 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 21/257 (8%), Positives = 72/257 (28%), Gaps = 14/257 (5%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 + + L+V+I+ + Y +P+ E + KNI++ + ++V D + Sbjct: 8 FVTFLILTVLIITLFFCIYYFPQQSEDIVQAKNIESNENYDKVHIDDDNSPSSDTENIET 67 Query: 67 MSPR-----VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYF 121 + P +++ +++ D+ L+ + + + ++ Sbjct: 68 VEPTRLTTGIKISEDLFKSTLS------DNEKLKILNDSKYNLEDRILFYLGYDSDR--- 118 Query: 122 AELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFK 181 Y +N + + + + + + L + + + + Sbjct: 119 VGFIYYDLNSNKYMELNKNNTFVAASTYKVKLNVLTYEKNKTDKDLLTKKLEYKDSDYEE 178 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSS 241 + N S + T + + + + ++ Sbjct: 179 GTGILQNLSDIPPTPISELLDLSIINSDNIATNMIGSYLGGHDQVRKEINEMFNISMPYD 238 Query: 242 ISNFHESNSWLGISDKY 258 + + + Y Sbjct: 239 ENITTPETEFRILKHIY 255 >gi|253565165|ref|ZP_04842621.1| beta-galactosidase [Bacteroides sp. 3_2_5] gi|251946630|gb|EES87007.1| beta-galactosidase [Bacteroides sp. 3_2_5] Length = 1341 Score = 41.9 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 25/237 (10%), Positives = 67/237 (28%), Gaps = 9/237 (3%) Query: 28 PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA--LSMSPRVELKNPSLIGSINLK 85 P ++ + + VK+ + D+ + S + +K ++K Sbjct: 773 PWADKNFAQAEEQILVKEATARPSIATVAAEGDKPEVMMTKASDIITIKGNGYTAQFDIK 832 Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145 L + N P + L + +F L +S T +N+ Sbjct: 833 TGTIYSLTYGNEKVITDGNGPKLDALRAFTNNDNWF--YSQWFDNGLHNLKHSATGFNMT 890 Query: 146 SGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH 205 + + T + + N S ++ + ++ D +S + + + + Sbjct: 891 TKEDGTVVLSFTVQSQAPNAAKILGGTSSGKNKIEELTDKKFGSSDFKFTTNQVWTVYKD 950 Query: 206 KPQT-----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257 +N + + + ++ + I N+ + I Sbjct: 951 GSIELEASITSNQPSLVLPRLGYMVRVPQQYANFTYYGRGPIDNYADRKVGQFIEQH 1007 >gi|221063274|gb|ACL98473.1| mitochondrial translocase OXA1 [Chlamydomonas reinhardtii] Length = 237 Score = 41.5 bits (95), Expect = 0.35, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 44/140 (31%), Gaps = 20/140 (14%) Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 KT + P + + +F + K+++ + W DL + DP L Sbjct: 33 KTALVVPGVMILNGAIFLSIFNGVSKLMAAKVPSLTTGGALWFSDLTSPDPYFGLPLMCT 92 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI-------LNWMPVVFVFALS 532 + + + P P D+ A + + M +F+ A Sbjct: 93 AVTLAMVEYGIN----LAGDA-------GPMPEDR--AKMTNGLKNFMRVMAFMFIPAGG 139 Query: 533 SFPAGLIIYWSWSNVISIVQ 552 AG + W + +VQ Sbjct: 140 YVAAGTAVLWVSNTAFGVVQ 159 >gi|323348589|gb|EGA82833.1| Cox18p [Saccharomyces cerevisiae Lalvin QA23] Length = 316 Score = 41.5 bits (95), Expect = 0.35, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 15/168 (8%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465 + +K +L+K +N+ ++QIP++ + I E + + W L Sbjct: 146 KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 205 Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519 ++ D P L + ++V + +M S + + Q + Sbjct: 206 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAM 265 Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + + V + S P L +YW S + S+VQ ++ ++ Sbjct: 266 TSILNVSRLGCVXMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 313 >gi|60682674|ref|YP_212818.1| putative exported beta-galactosidase [Bacteroides fragilis NCTC 9343] gi|60494108|emb|CAH08900.1| putative exported beta-galactosidase [Bacteroides fragilis NCTC 9343] Length = 1341 Score = 41.5 bits (95), Expect = 0.35, Method: Composition-based stats. Identities = 25/237 (10%), Positives = 67/237 (28%), Gaps = 9/237 (3%) Query: 28 PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA--LSMSPRVELKNPSLIGSINLK 85 P ++ + + VK+ + D+ + S + +K ++K Sbjct: 773 PWADKNFAQAEEQILVKEATARPSIATVAAEGDKPEVMMTKASDIITIKGNGYTAQFDIK 832 Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145 L + N P + L + +F L +S T +N+ Sbjct: 833 TGTIYSLTYGNEKVITDGNGPKLDALRAFTNNDNWF--YSQWFDNGLHNLKHSATGFNMT 890 Query: 146 SGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH 205 + + T + + N S ++ + ++ D +S + + + + Sbjct: 891 TKEDGTVVLSFTVQSQAPNAAKILGGTSSGKNKIEELTDKKFGSSDFKFTTNQVWTVYKD 950 Query: 206 KPQT-----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257 +N + + + ++ + I N+ + I Sbjct: 951 GSIELEASITSNQPSLVLPRLGYMVRVPQQYANFTYYGRGPIDNYADRKVGQFIEQH 1007 >gi|53714661|ref|YP_100653.1| beta-galactosidase [Bacteroides fragilis YCH46] gi|52217526|dbj|BAD50119.1| beta-galactosidase [Bacteroides fragilis YCH46] Length = 1341 Score = 41.5 bits (95), Expect = 0.35, Method: Composition-based stats. Identities = 25/237 (10%), Positives = 67/237 (28%), Gaps = 9/237 (3%) Query: 28 PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA--LSMSPRVELKNPSLIGSINLK 85 P ++ + + VK+ + D+ + S + +K ++K Sbjct: 773 PWADKNFAQAEEQILVKEATARPSIATVAAEGDKPEVMMTKASDIITIKGNGYTAQFDIK 832 Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145 L + N P + L + +F L +S T +N+ Sbjct: 833 TGTIYSLTYGNEKVITDGNGPKLDALRAFTNNDNWF--YSQWFDNGLHNLKHSATGFNMT 890 Query: 146 SGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH 205 + + T + + N S ++ + ++ D +S + + + + Sbjct: 891 TKEDGTVVLSFTVQSQAPNAAKILGGTSSGKNKIEELTDKKFGSSDFKFTTNQVWTVYKD 950 Query: 206 KPQT-----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257 +N + + + ++ + I N+ + I Sbjct: 951 GSIELEASITSNQPSLVLPRLGYMVRVPQQYANFTYYGRGPIDNYADRKVGQFIEQH 1007 >gi|265765877|ref|ZP_06093918.1| beta-galactosidase [Bacteroides sp. 2_1_16] gi|263253545|gb|EEZ25010.1| beta-galactosidase [Bacteroides sp. 2_1_16] Length = 1341 Score = 41.5 bits (95), Expect = 0.35, Method: Composition-based stats. Identities = 25/237 (10%), Positives = 67/237 (28%), Gaps = 9/237 (3%) Query: 28 PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA--LSMSPRVELKNPSLIGSINLK 85 P ++ + + VK+ + D+ + S + +K ++K Sbjct: 773 PWADKNFAQAEEQILVKEATARPSIATVAAEGDKPEVMMTKASDIITIKGNGYTAQFDIK 832 Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145 L + N P + L + +F L +S T +N+ Sbjct: 833 TGTIYSLTYGNEKVITDGNGPKLDALRAFTNNDNWF--YSQWFDNGLHNLKHSATGFNMT 890 Query: 146 SGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH 205 + + T + + N S ++ + ++ D +S + + + + Sbjct: 891 TKEDGTVVLSFTVQSQAPNAAKILGGTSSGKNKIEELTDKKFGSSDFKFTTNQVWTVYKD 950 Query: 206 KPQT-----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257 +N + + + ++ + I N+ + I Sbjct: 951 GSIELEASITSNQPSLVLPRLGYMVRVPQQYANFTYYGRGPIDNYADRKVGQFIEQH 1007 >gi|301164152|emb|CBW23708.1| putative exported beta-galactosidase [Bacteroides fragilis 638R] Length = 1341 Score = 41.5 bits (95), Expect = 0.36, Method: Composition-based stats. Identities = 25/237 (10%), Positives = 67/237 (28%), Gaps = 9/237 (3%) Query: 28 PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA--LSMSPRVELKNPSLIGSINLK 85 P ++ + + VK+ + D+ + S + +K ++K Sbjct: 773 PWADKNFAQAEEQILVKEATARPSIATVAAEGDKPEVMMTKASDIITIKGNGYTAQFDIK 832 Query: 86 GAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLI 145 L + N P + L + +F L +S T +N+ Sbjct: 833 TGTIYSLTYGNEKVITDGNGPKLDALRAFTNNDNWF--YSQWFDNGLHNLKHSATGFNMT 890 Query: 146 SGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH 205 + + T + + N S ++ + ++ D +S + + + + Sbjct: 891 TKEDGTVVLSFTVQSQAPNAAKILGGTSSGKNKIEELTDKKFGSSDFKFTTNQVWTVYKD 950 Query: 206 KPQT-----ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257 +N + + + ++ + I N+ + I Sbjct: 951 GSIELEASITSNQPSLVLPRLGYMVRVPQQYANFTYYGRGPIDNYADRKVGQFIEQH 1007 >gi|289614483|emb|CBI58767.1| unnamed protein product [Sordaria macrospora] Length = 459 Score = 41.5 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 54/175 (30%), Gaps = 59/175 (33%) Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +NPLA + F + S+E W DL AADP + Sbjct: 275 VNPLANTYLPDSLSAYF---QNALPTSME-----GCLWFPDLMAADPLH----------- 315 Query: 484 LPGFMHVGIWPIIMSLSMFIQMK----------MSP---------------PPADKGQAM 518 I P I+S +MF+ + ++P K Q Sbjct: 316 --------ILPFILSFTMFVNVMPRTREGWLRLLNPGTEVAEPNPHNIGDQASQIKVQKS 367 Query: 519 ILNWM-------PVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGL 566 I M ++ A + PA L +YW +++ S +V+ L Sbjct: 368 IGLRMQRALLLLTLLVGPATFNLPAALHLYWITTSLTSNAITSVVAAKMPLPPSL 422 >gi|224128952|ref|XP_002329007.1| inner membrane protein [Populus trichocarpa] gi|222839241|gb|EEE77592.1| inner membrane protein [Populus trichocarpa] Length = 257 Score = 41.5 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 2/36 (5%) Query: 519 ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQA 554 I +P F P G ++YW ++ +++QQ Sbjct: 78 IFLTLP--MFFIGYCIPQGSLVYWVTNSSFTVIQQV 111 >gi|259146565|emb|CAY79822.1| Cox18p [Saccharomyces cerevisiae EC1118] Length = 316 Score = 41.5 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 15/168 (8%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465 + +K +L+K +N+ ++QIP++ + I E + + W L Sbjct: 146 KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 205 Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519 ++ D P L + ++V + +M S + + Q + Sbjct: 206 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAM 265 Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + + V + S P L +YW S + S+VQ ++ ++ Sbjct: 266 TSILNVSRLGCVGMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 313 >gi|229523758|ref|ZP_04413163.1| hypothetical protein VCA_001333 [Vibrio cholerae bv. albensis VL426] gi|229337339|gb|EEO02356.1| hypothetical protein VCA_001333 [Vibrio cholerae bv. albensis VL426] Length = 568 Score = 41.5 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 69/222 (31%), Gaps = 6/222 (2%) Query: 5 WNYFVA--IALSVIIVYAWQNFYVYPRIEEMNN----ERKNIQTVKQPNQVDNSYAAVLI 58 + I L V +++++ F+ E+ K +N+Y + Sbjct: 2 KKIIILYTIGLLVSLIFSYYFFFNNHNQEKHQQGLYYTESYDSVTKNKKADENAYKTYDV 61 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + ++ + ++ + + ++ D + +S+ + L KN Sbjct: 62 KLTSTLINGTEKINQQLDNFKMKLHFSDGIIQDGTVYDITTSETSDEIPIYLPFTYKYKN 121 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 F ++ + + + +L T+ N S T + + I E + Sbjct: 122 GLFQDISLLDLSPDHKLNLIQTILNDFSYSTSTDEVVLNSAYMERKYIYNENAKQVTRKK 181 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGF 220 + ++ +++ P+ T+ F + F Sbjct: 182 IIVTDHNDNSDILNEHENWLLSLNDDGTPRDLTSYFYKEINF 223 >gi|82596510|ref|XP_726290.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23481641|gb|EAA17855.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 184 Score = 41.5 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 47/149 (31%), Gaps = 28/149 (18%) Query: 432 PILLQIPVFFAIYKV---ISISLEMRHAPFW---GWIKDLAAADPTNIFTLFGILPFYLP 485 + LQ P+FF Y I+ E+ + W+ L+ DP I + L Sbjct: 1 MVFLQTPLFFVFYFSMKKIASYPEIFKEFTFESPLWLDSLSLPDPYCILPILSSLLLLSN 60 Query: 486 GFMHVGIWPIIMSLSMFIQMKMSPPPADKG---QAMI-------LNWMPVVFVFALSSFP 535 + I I +P D Q I + + S P Sbjct: 61 HELTALIDKHI--------TNNNPNKYDDESEFQKNIKKISKIAMRVFYISSALFFKSMP 112 Query: 536 AGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 +GL IY+ + Q I ++ +I Sbjct: 113 SGLFIYFITNTFF----QLFITQICKVKI 137 >gi|229084696|ref|ZP_04216963.1| hypothetical protein bcere0022_13300 [Bacillus cereus Rock3-44] gi|228698652|gb|EEL51370.1| hypothetical protein bcere0022_13300 [Bacillus cereus Rock3-44] Length = 290 Score = 41.1 bits (94), Expect = 0.47, Method: Composition-based stats. Identities = 30/228 (13%), Positives = 60/228 (26%), Gaps = 10/228 (4%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLR----GY-----HLDVSSNSPIVTLLSPSNTKNAY 120 ++N +I SI+ +GA+ + L+ Y +PI+ + N Y Sbjct: 2 TTTIQNEKVIVSISEQGAELQSIRLKEDNTEYLWQGDKKYWGRRAPILFPIVGRLVNNTY 61 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179 + + S + + S +T FE +S + + Sbjct: 62 YVDDKPYSLTQHGFARDLTFAVTEQSETKITYAVTSNSETLQNYPYEFELRVSYELDEQN 121 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + V N++ ++ FS + P +F L K + K Sbjct: 122 IHVTYEVHNSNSTEMFFSIGAHPGFNCPLVEGESFTDYHLSFNGLEHLETSILKGPFLSK 181 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQA 287 D + I + + A Sbjct: 182 EKQLIVENKAELPLTYDLFKNDALIFENMNTNEIAIRSHKHNKFVKVA 229 >gi|190406915|gb|EDV10182.1| inner membrane protein COX18, mitochondrial precursor [Saccharomyces cerevisiae RM11-1a] Length = 316 Score = 41.1 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWG--WIKDL- 465 + +K +L+K +N+ ++QIP++ + I E + + W L Sbjct: 146 KETRKRQKKLFKKYNVPLWKNALLPMVQIPLWVTVSMGIRTLTETQLIESFYPSWFSALG 205 Query: 466 -AAAD---PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG--QAMI 519 ++ D P L + ++V + +M S + + Q + Sbjct: 206 FSSFDLSSPLVAMPLLAPILVGTLAVLNVELNGRLMFSSSLSSQGIKTISRNSTRVQEAL 265 Query: 520 LNWMPV------VFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMHG 561 + + V V + S P L +YW S + S+VQ ++ ++ Sbjct: 266 TSILNVSRLGCVVMLAMSSQAPFLLSLYWISSQLFSLVQNIILNWIYP 313 >gi|291523549|emb|CBK81842.1| Galactose mutarotase and related enzymes [Coprococcus catus GD/7] Length = 295 Score = 41.1 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 43/158 (27%), Gaps = 10/158 (6%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPI-------VTLLSPSNTKNA--Y 120 R +++N L+ +I+ GA+ + + Y ++ L Y Sbjct: 3 RFKMENDRLVVTIDDLGAELVSIYDKKYSRELIWQGDPAWWKRQAPILFPNVGKFYGGEY 62 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179 + + + + S +T + FE I+ + Sbjct: 63 LYQGRHYVQDQHGFARDYVLERVEESPASVTHRLVSNAETRKVYPFDFELMITHRLDGDK 122 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 I V N + F+ G + P + Sbjct: 123 VDIQWQVKNIGDHPMHFTIGGHPGFNVPVLPDTEYSDY 160 >gi|302534658|ref|ZP_07287000.1| predicted protein [Streptomyces sp. C] gi|302443553|gb|EFL15369.1| predicted protein [Streptomyces sp. C] Length = 217 Score = 41.1 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 55/160 (34%), Gaps = 35/160 (21%) Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 GC P+LLQ+PVF+ +Y+ S E+ + L A L PF G + Sbjct: 55 GCLPMLLQLPVFYLMYQSFSSGGELLG--HRLFAAPLGAR---WTGALEEGGPFGAQGLV 109 Query: 489 HVGIWPIIMSLSMF--------------------------IQMKMSPPPADKGQAMILNW 522 +G++ +I ++ + Q +S + + Sbjct: 110 FLGLFAVIAVVAAWSAVRGRRAAAAAPVPVPVPVAGKGKGAQPALSAEQVEAM-RKVGGV 168 Query: 523 MPVVFV---FALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 +P++ + P +Y + S+ ++A + Sbjct: 169 LPLLSFGTLVTAAVVPLAAGLYLLTTTAWSVGERAWLQHR 208 >gi|256397362|ref|YP_003118926.1| phosphate ABC transporter inner membrane subunit PstC [Catenulispora acidiphila DSM 44928] gi|256363588|gb|ACU77085.1| phosphate ABC transporter, inner membrane subunit PstC [Catenulispora acidiphila DSM 44928] Length = 694 Score = 41.1 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 15/87 (17%) Query: 427 LAGCWPILLQIP-VFFAIYKVISISLEMRHAPFW-----GWIKDLAAADPTNIFTLFGIL 480 L +L +P + + ++ ++ + M+ A + GWI P +FG Sbjct: 130 LGYIVDLLAAVPSIVYGLWGILFLVPHMQGASQFVSDVLGWI-------PMFSSGIFGRS 182 Query: 481 PFYLPGFMHVGIWPIIMSLS--MFIQM 505 F + + I PII ++S +F+Q Sbjct: 183 VFTAGVILAIMILPIIAAISREVFLQT 209 >gi|159482252|ref|XP_001699185.1| cytochrome c oxidase assembly factor [Chlamydomonas reinhardtii] gi|158273032|gb|EDO98825.1| cytochrome c oxidase assembly factor [Chlamydomonas reinhardtii] Length = 178 Score = 41.1 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 44/140 (31%), Gaps = 20/140 (14%) Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGI 479 KT + P + + +F + K+++ + W DL + DP L Sbjct: 33 KTALVVPGVMILNGAIFLSIFNGVSKLMAAKVPSLTTGGALWFSDLTSPDPYFGLPLMCT 92 Query: 480 LPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI-------LNWMPVVFVFALS 532 + + + P P D+ A + + M +F+ A Sbjct: 93 AVTLAMVEYGIN----LAGDA-------GPMPEDR--AKMTNGLKNFMRVMAFMFIPAGG 139 Query: 533 SFPAGLIIYWSWSNVISIVQ 552 AG + W + +VQ Sbjct: 140 YVAAGTAVLWVSNTAFGVVQ 159 >gi|239633962|gb|ACR84167.1| oxidase assembly 1-like protein [Lepus granatensis] Length = 83 Score = 41.1 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 23/97 (23%) Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDL 465 M K H+I L L Q P+F + + + W +DL Sbjct: 2 KASSEMTLYQKKHDIKLLRPLILPLTQAPIFIXFFIALREMANLPVPSLQTGGLWWFQDL 61 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 DPT I P++++ +M+ Sbjct: 62 TVCDPTY-------------------ILPMVVTATMW 79 >gi|326430684|gb|EGD76254.1| hypothetical protein PTSG_00956 [Salpingoeca sp. ATCC 50818] Length = 1188 Score = 40.7 bits (93), Expect = 0.61, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 19/28 (67%) Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQ 552 V+ + ++ P+GL++YW S+ ++VQ Sbjct: 1104 VLMLPIYAALPSGLVLYWFVSSASTVVQ 1131 >gi|281210573|gb|EFA84739.1| glycosyltransferase [Polysphondylium pallidum PN500] Length = 977 Score = 40.7 bits (93), Expect = 0.61, Method: Composition-based stats. Identities = 25/219 (11%), Positives = 79/219 (36%), Gaps = 12/219 (5%) Query: 322 EKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKK 381 IP+ E+ + + + ++ ++ + + + + +F K+L + Sbjct: 704 ADQQGIPQSEIAFILFFLALLIFSIVSIVFLWHRNLESKVMKLFSIVLFFKILALFVCLI 763 Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 + ++ I+ + ++ + + I+P G + + F Sbjct: 764 YWAMFLRYESGHKDINLAGTSLDLIARALFILLLLLVGQGWTISPFYGNVVSRVINVIMF 823 Query: 442 AIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSM 501 + V+S+++ + P ++ + T+ G + L F+ + IW I++ + Sbjct: 824 VVILVMSVAIYL--VPNVTFMP--SKMYTFFYDTIPGYI--LLAFFLTIMIWFIVLCRNS 877 Query: 502 FIQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 +++ D + + ++F F P +++ Sbjct: 878 YVKQ------VDIVKKKFFLYFGLIFTFWFLMMPVSVLV 910 >gi|255010865|ref|ZP_05282991.1| putative exported beta-galactosidase [Bacteroides fragilis 3_1_12] gi|313148667|ref|ZP_07810860.1| beta-galactosidase [Bacteroides fragilis 3_1_12] gi|313137434|gb|EFR54794.1| beta-galactosidase [Bacteroides fragilis 3_1_12] Length = 1341 Score = 40.7 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 22/230 (9%), Positives = 63/230 (27%), Gaps = 7/230 (3%) Query: 33 MNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 E + + N+ A+ + S + +K ++K L Sbjct: 780 AQAEEQILVKEATARPAINTVASGSDKPEIIMIKASDIITIKGNGYTAQFDIKTGTIYSL 839 Query: 93 NLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTP 152 + N P + L + +F L +S T +++ + + T Sbjct: 840 TYGNEKVITDGNGPKLDALRAFTNNDNWF--YSQWFDNGLHNLKHSATGFDMTTKEDGTV 897 Query: 153 TTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT--- 209 + + N S ++ + ++ D ++ + + + + Sbjct: 898 VLSFTVKSQAPNAAKILGGTSSGKNKIEELTDKKFGSNDFKFTTNQVWTVYKDGSIELEA 957 Query: 210 --ATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDK 257 +N + + + ++ + I N+ + I Sbjct: 958 SITSNQPSLVLPRLGYMIRVPQQYDNFTYYGRGPIDNYADRKVGQFIEQH 1007 >gi|258563542|ref|XP_002582516.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237908023|gb|EEP82424.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 437 Score = 40.7 bits (93), Expect = 0.68, Method: Composition-based stats. Identities = 25/213 (11%), Positives = 53/213 (24%), Gaps = 18/213 (8%) Query: 12 ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRV 71 AL+ + AW P T P + A V + + + Sbjct: 5 ALTRALWLAWVVSAQPPPPSANATVPAPGPTGTSP-----APAPVPTEPPSNGSASLEVF 59 Query: 72 ELKNPSLIGSINLKGAQFDDLNLRG----YHLDVSSNSPIVTLLSPSNTKNAYFAELDYV 127 + ++ S GA+ L + V ++ + + NAY + Sbjct: 60 TISANNITASFIPYGARLTSLLVPDRSGQQQDIVVGFDDPAQYVANAASNNAYIGPVVGR 119 Query: 128 STA---------NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 + + + +N + + + T +L + Sbjct: 120 YANRIKNSTFVLDGVTYHIPSNEFNKTQTVHGGVVGYDQRNWIVTDYTTNSITFALFDRG 179 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 V N + + S + Q T Sbjct: 180 FENFPGDVINLATYTVNSSWSANNSDFQTQLTT 212 >gi|291534320|emb|CBL07432.1| Galactose mutarotase and related enzymes [Roseburia intestinalis M50/1] Length = 302 Score = 40.7 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 27/236 (11%), Positives = 59/236 (25%), Gaps = 11/236 (4%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLR----GY-----HLDVSSNSPIVTLLSPSNTKNAY 120 R L+N +L I+ GA+ + + Y SP++ + Y Sbjct: 12 RYTLENENLKVEIDSFGAEIKSVKRKSDNFEYMWCGDKKYWGRTSPVLFPFVGAPKNKEY 71 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179 + + + + + + ++ F IS + Sbjct: 72 RYDGKTYTMGQHGFARDMEFTLEAQTEENISFVLTDTAETCEKYPFHFALHISYELCKNE 131 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKP-QTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 K+ TV N ++ FS + P N G F + + Sbjct: 132 VKVNWTVENTDTKELYFSIGAHPAFNCPVHGEENKTGYGLKFGGLADTIHHHGNTPDGMA 191 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 + + ++ ++ + +G KF Sbjct: 192 VMEDKVLALKDGCVTFTEGFFDECTYMVEGKQTGEVSLLDREGIPYVTVKFDTPLF 247 >gi|255024311|ref|ZP_05296297.1| OxaA-like protein precursor [Listeria monocytogenes FSL J1-208] Length = 59 Score = 40.7 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 21/49 (42%), Gaps = 3/49 (6%) Query: 530 ALSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAE---IGLIDRLRSTFS 575 + P+ L +YW+ + Q + K++ + I ++++ F Sbjct: 1 VSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHPEIKVMEQEEKEFE 49 >gi|167752631|ref|ZP_02424758.1| hypothetical protein ALIPUT_00886 [Alistipes putredinis DSM 17216] gi|167659700|gb|EDS03830.1| hypothetical protein ALIPUT_00886 [Alistipes putredinis DSM 17216] Length = 209 Score = 40.7 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 31/99 (31%), Gaps = 7/99 (7%) Query: 3 RNWNYFVAIALSVIIV-YAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 N + I L +++ W P + N +Q +++ + Sbjct: 8 NNKRLILMIVLLAVVIALMWLL----PDGSQPAAPATNAPKTEQTKNTNDAPDDIEATTL 63 Query: 62 AQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLD 100 +A + +P ++ G+ G+ + L + Sbjct: 64 VKAGTQAPDFRVE--MFDGTTFTLGSLRGKVVLLNFWAT 100 >gi|261206312|ref|XP_002627893.1| mitochondrial export translocase [Ajellomyces dermatitidis SLH14081] gi|239592952|gb|EEQ75533.1| mitochondrial export translocase [Ajellomyces dermatitidis SLH14081] gi|239610873|gb|EEQ87860.1| mitochondrial export translocase [Ajellomyces dermatitidis ER-3] Length = 367 Score = 40.7 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 55/178 (30%), Gaps = 45/178 (25%) Query: 429 GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFM 488 G IL Q + + + + W DL AADP Sbjct: 198 GLLVILQQWFNPNGVKAQVPVESSLSTEGA-LWFPDLMAADP------------------ 238 Query: 489 HVGIWPIIMSLSMFIQ----MKMSPPPADKG-------QA-------MILNWMPVVFVFA 530 +G+ P+ +S+ MFI K++ Q I M + A Sbjct: 239 -LGVLPVAISVLMFIHITWGSKINKMKDIPKLVALGNLQGVFSWAIHRIFQAMSIWIAPA 297 Query: 531 LS--SFPAGLIIYWSWSNVISIVQQAVIMKMHGAEI-----GLIDRLRSTFSKNYNSQ 581 L PA L IYW + ++IVQ ++ +R + + +Q Sbjct: 298 LLYSQAPAALCIYWLSTTCVAIVQSRLLQMYMPTPNIPMPCRKRTIVRFMYERKPGTQ 355 >gi|309362417|emb|CAP28248.2| hypothetical protein CBG_08423 [Caenorhabditis briggsae AF16] Length = 311 Score = 40.4 bits (92), Expect = 0.78, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 81/264 (30%), Gaps = 59/264 (22%) Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 P + +I + + M M + L ++ +A + V +++ PL A Sbjct: 33 PAIAPAFQYASDCYITQSIQMGMEGLHELGLSWPVAFVSAAVLLRVGTAPLHVYAEKLFA 92 Query: 388 NMKNIQ--------------------PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPL 427 + Q P D + + K S P++ + L + ++ Sbjct: 93 ERLHAQNFLTRGILKKVSERYRVELGPSKDGSKLEVKTSDPKIAKVTQDALQEVPSMLAE 152 Query: 428 AGCWPILLQIPVFFAIYKVISISLEMRHA---------PFWGWIKDLAAADPTNIFTLFG 478 G +Q + I S +R+ WI D+ A DP Sbjct: 153 HGLQAARIQNLKMCTVPIWIFSSFALRNVINSDFHPSVAGALWIPDMLAPDPYF------ 206 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFI----QMKMSPPPADKGQAM-----ILNWMPVVFVF 529 + P+ + + F+ Q K+ P +L + +F Sbjct: 207 -------------VLPVAVGVFGFLNLYSQRKIYPGVIKTTMKQKSYDAVLAFFT-MFAV 252 Query: 530 -ALSSFPAGLIIYWSWSNVISIVQ 552 ++ PA + +YW + + Q Sbjct: 253 TIMAQLPACIPLYWLMVSTTGMAQ 276 >gi|67539108|ref|XP_663328.1| hypothetical protein AN5724.2 [Aspergillus nidulans FGSC A4] gi|40743627|gb|EAA62817.1| hypothetical protein AN5724.2 [Aspergillus nidulans FGSC A4] gi|259484799|tpe|CBF81330.1| TPA: mitochondrial export translocase Oxa2, putative (AFU_orthologue; AFUA_1G06880) [Aspergillus nidulans FGSC A4] Length = 329 Score = 40.4 bits (92), Expect = 0.79, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 49/155 (31%), Gaps = 42/155 (27%) Query: 446 VISISLE-MRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQ 504 + +++E A W DL A+D T GI P I++++M + Sbjct: 186 ALRLTVEPSFAAEGALWFPDLLASDST-------------------GILPAILTVTMLVN 226 Query: 505 MK-------MSPPPADK--GQAMIL-----------NWMPVVFVFALSSFPAGLIIYWSW 544 ++ + + + V + P ++IYW Sbjct: 227 IRNGWKVPTLRSAADLPLKEMGKQMSNTLFRLLIQCMALNVGLACYMQGMPVAVMIYWIT 286 Query: 545 SNVISIVQQAVIMKMHGAEIGL--IDRLRSTFSKN 577 S I+ Q ++ K L ++ +SK Sbjct: 287 STNIATAQTYLLQKYMFPTPSLKPWRQIHIAYSKR 321 >gi|312073698|ref|XP_003139637.1| hypothetical protein LOAG_04052 [Loa loa] gi|307765202|gb|EFO24436.1| hypothetical protein LOAG_04052 [Loa loa] Length = 393 Score = 40.4 bits (92), Expect = 0.80, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 12/96 (12%) Query: 456 APFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG 515 A DL DP + + F + + ++S ++ + P + Sbjct: 165 ASGTLSFIDLTVPDPAFLLPTLTAICFTFAIKRWIETLQVEKAVSSWM---LGLKPDNA- 220 Query: 516 QAMILNWMPVV--FVFALSSFPAGLIIYWSWSNVIS 549 P+ + S+ P+ + +YW S++IS Sbjct: 221 ------IYPIAACSLLVASNVPSVVCVYWITSSLIS 250 >gi|149033750|gb|EDL88546.1| similar to hypothetical protein FLJ38991 (predicted), isoform CRA_d [Rattus norvegicus] Length = 272 Score = 40.4 bits (92), Expect = 0.82, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 20/32 (62%) Query: 525 VVFVFALSSFPAGLIIYWSWSNVISIVQQAVI 556 V+ V ++ P+ L++YW S+++ + Q ++ Sbjct: 203 VLMVPVAATVPSALVLYWLCSSLMGLSQNLLL 234 >gi|289806613|ref|ZP_06537242.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 110 Score = 40.4 bits (92), Expect = 0.83, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 23/61 (37%) Query: 215 GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQ 274 G D+ + K+ I + N W+ + +Y+A+ +IP + + + Sbjct: 26 HTFRGAAYSTPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNNFY 85 Query: 275 F 275 Sbjct: 86 T 86 >gi|213648781|ref|ZP_03378834.1| putative inner membrane protein translocase component YidC [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 72 Score = 40.4 bits (92), Expect = 0.86, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 10/82 (12%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N V IAL + WQ + ++ +Q Q + A D Sbjct: 1 MDSQRNLLV-IALLFVSFMIWQAW---------EQDKNPQPQTQQTMQTTTTAAGSAADQ 50 Query: 61 RAQALSMSPRVELKNPSLIGSI 82 A + +K L +I Sbjct: 51 GVPASGQGKMITVKTDVLDLTI 72 >gi|207093711|ref|ZP_03241498.1| putative inner membrane protein translocase component YidC [Helicobacter pylori HPKX_438_AG0C1] Length = 41 Score = 40.4 bits (92), Expect = 0.95, Method: Composition-based stats. Identities = 20/31 (64%), Positives = 24/31 (77%) Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 YK H NPL GC P++LQIPVFFAIY+V+ Sbjct: 11 YKKHGANPLGGCLPLILQIPVFFAIYRVLYN 41 >gi|312873628|ref|ZP_07733675.1| aldose 1-epimerase [Lactobacillus iners LEAF 2052A-d] gi|311090881|gb|EFQ49278.1| aldose 1-epimerase [Lactobacillus iners LEAF 2052A-d] Length = 290 Score = 40.4 bits (92), Expect = 0.97, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 45/163 (27%), Gaps = 10/163 (6%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119 +V ++N L + L GA+ ++ L+ Y L + +N Sbjct: 2 EQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178 Y + + + L + L K + TI+ E Sbjct: 62 YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEETKLVYPYSYTVTITYTLEDT 121 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 I + NN + +S + +N E + Sbjct: 122 YLHINYEIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEPKL 164 >gi|237732773|ref|ZP_04563254.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229384143|gb|EEO34234.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 1739 Score = 40.4 bits (92), Expect = 0.99, Method: Composition-based stats. Identities = 25/233 (10%), Positives = 57/233 (24%), Gaps = 19/233 (8%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 +A L V+++ +Y E E T + + +N + + + S Sbjct: 4 ILAFFLVVVVLLGSTQLTIYADNESQGQEITTSVTNGESTKNENDSSMITNEKTVNNEST 63 Query: 68 SP---------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 SP ++ + +I+ AQ ++ + Y ++ S + Sbjct: 64 SPEKTADVKNSSITGKVKLIINTQYFKKNISTLSAQLANIE-QTYTGELDSTKENSQIFE 122 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 N N + + E + V N + T N Sbjct: 123 FKNIVNGTY---TLTIQGDGYETVSKEVVVNNNETTVKYVNTNSVADNIEGNGFGTFAYG 179 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 ++ D ++ S + + Sbjct: 180 DFNKDGKIDSKDKKILSTAIFNNDSSNSLLDIDDNNKIDLLDLHTFTYAYSDN 232 >gi|167754747|ref|ZP_02426874.1| hypothetical protein CLORAM_00251 [Clostridium ramosum DSM 1402] gi|167705579|gb|EDS20158.1| hypothetical protein CLORAM_00251 [Clostridium ramosum DSM 1402] Length = 1739 Score = 40.4 bits (92), Expect = 0.99, Method: Composition-based stats. Identities = 25/233 (10%), Positives = 57/233 (24%), Gaps = 19/233 (8%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 +A L V+++ +Y E E T + + +N + + + S Sbjct: 4 ILAFFLVVVVLLGSTQLTIYADNESQGQEITTSVTNGESTKNENDSSMITNEKTVNNEST 63 Query: 68 SP---------------RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLS 112 SP ++ + +I+ AQ ++ + Y ++ S + Sbjct: 64 SPEKTADVKNSSITGKVKLIINTQYFKKNISTLSAQLANIE-QTYTGELDSTKENSQIFE 122 Query: 113 PSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTI 172 N N + + E + V N + T N Sbjct: 123 FKNIVNGTY---TLTIQGDGYETVSKEVVVNNNETTVKYVNTNSVADNIEGNGFGTFAYG 179 Query: 173 SLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLG 225 ++ D ++ S + + Sbjct: 180 DFNKDGKIDSKDKKILSTAIFNNDSSNSLLDIDDNNKIDLLDLHTFTYAYSDN 232 >gi|297818904|ref|XP_002877335.1| hypothetical protein ARALYDRAFT_905549 [Arabidopsis lyrata subsp. lyrata] gi|297323173|gb|EFH53594.1| hypothetical protein ARALYDRAFT_905549 [Arabidopsis lyrata subsp. lyrata] Length = 338 Score = 40.0 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 20/41 (48%) Query: 517 AMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIM 557 M LN++ P G ++YW+ + SI QQ+++ Sbjct: 67 KMFLNFLTFALYGLSFQMPQGSLLYWATNLSFSIAQQSILN 107 >gi|255714018|ref|XP_002553291.1| KLTH0D13376p [Lachancea thermotolerans] gi|238934671|emb|CAR22853.1| KLTH0D13376p [Lachancea thermotolerans] Length = 322 Score = 40.0 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 61/177 (34%), Gaps = 34/177 (19%) Query: 409 QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAA 468 + + +++ + L+QIP++ ++ + + R +L A Sbjct: 143 KETRSRQKKMFGESKVQLWKNALLPLVQIPLWVSVSMGLRELTKQR-----LVDSNLTHA 197 Query: 469 DPTNIFTLFGILPFYLPGFMHVGI--WPI-------------------IMSLSMFIQM-- 505 +P + + + + PI +M+ + M Sbjct: 198 NPLQNIDSLDYVSRISSLDLSLPLDGLPILAPLLLGTLALLNVEHNGRVMTTTTSETMGI 257 Query: 506 KMSPPPADKGQAMILNWMPVV----FVFALSSFPAGLII--YWSWSNVISIVQQAVI 556 K++P P+ K + + + V F S A L++ YW S + S+VQ ++ Sbjct: 258 KLAPNPSSKVSQSMQSILNVSRLSCIFFMGVSSQAPLLLSAYWISSQLYSLVQNLLL 314 >gi|13938189|gb|AAH07213.1| ZDHHC6 protein [Homo sapiens] gi|16924296|gb|AAH17434.1| ZDHHC6 protein [Homo sapiens] gi|119569914|gb|EAW49529.1| zinc finger, DHHC-type containing 6, isoform CRA_c [Homo sapiens] gi|325463157|gb|ADZ15349.1| zinc finger, DHHC-type containing 6 [synthetic construct] Length = 409 Score = 40.0 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 60/179 (33%), Gaps = 11/179 (6%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ML+++ ++ N+ A+ + FV L + + + Sbjct: 50 HTTGGSVNFIMLINWTVMILYNYFNAMFVGPGFV-PLGWKPDTMYLQYCKVCQAYKAPRS 108 Query: 398 ELREKFKQSPPQVLQK--AMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRH 455 K + ++ + N + + A V+++ ++ H Sbjct: 109 HHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFVMTMYTQLYH 168 Query: 456 APFWGWIK---DLAAA--DPTNIFTLFGILPFYLPGFMHVGIW--PIIMSLSMFIQMKM 507 +GW D++AA DP I FG+ F F I + + FIQMK+ Sbjct: 169 RLSFGWNTVKIDMSAARRDPLPIVP-FGLAAFATTLFALGLALGTTIAVGMLFFIQMKI 226 >gi|309803538|ref|ZP_07697631.1| aldose 1-epimerase [Lactobacillus iners LactinV 11V1-d] gi|308164422|gb|EFO66676.1| aldose 1-epimerase [Lactobacillus iners LactinV 11V1-d] Length = 290 Score = 40.0 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 44/161 (27%), Gaps = 10/161 (6%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119 +V ++N L + L GA+ ++ L+ Y L + +N Sbjct: 2 EQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178 Y + + + L + L K + TI+ E Sbjct: 62 YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEETKLVYPYSYTVTITYTLEDT 121 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 I + NN + +S + +N E Sbjct: 122 YLHINYEIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEP 162 >gi|259501380|ref|ZP_05744282.1| aldose epimerase [Lactobacillus iners DSM 13335] gi|302190900|ref|ZP_07267154.1| galactose mutarotase-like enzyme [Lactobacillus iners AB-1] gi|259167233|gb|EEW51728.1| aldose epimerase [Lactobacillus iners DSM 13335] Length = 290 Score = 40.0 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 45/163 (27%), Gaps = 10/163 (6%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119 +V ++N L + L GA+ ++ L+ Y L + +N Sbjct: 2 KQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178 Y + + + L + L K + TI+ E Sbjct: 62 YLIDGKEYNMKQHGFLRDRVFKIVDKQKNKLVLQHSATEETKLVYPYSYTVTITYTLEDT 121 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 I + NN + +S + +N E + Sbjct: 122 YLHINYEIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEPKL 164 >gi|312872142|ref|ZP_07732215.1| aldose 1-epimerase [Lactobacillus iners LEAF 2062A-h1] gi|311092226|gb|EFQ50597.1| aldose 1-epimerase [Lactobacillus iners LEAF 2062A-h1] Length = 290 Score = 40.0 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 45/163 (27%), Gaps = 10/163 (6%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119 +V ++N L + L GA+ ++ L+ Y L + +N Sbjct: 2 EQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178 Y + + + L + L K + TI+ E Sbjct: 62 YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEGTKLVYPYSYTVTITYTLEDT 121 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 I + NN + +S + +N E + Sbjct: 122 YLHINYEIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEPKL 164 >gi|327441708|dbj|BAK18073.1| Trk-type K+ transport systems, membrane component [Solibacillus silvestris StLB046] Length = 246 Score = 40.0 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 12/105 (11%) Query: 5 WN--YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N + IAL++ +++A ++V P +E + I ++K A A Sbjct: 8 KNGTLLLVIALAMALLFAVYYYFVKPVQDEEQSIHSEISSLKTEISALEETIATHQTQLA 67 Query: 63 QALSMSP--RVEL----KNPSLIGSI----NLKGAQFDDLNLRGY 97 Q + R ++ + +LI SI L G++ + Y Sbjct: 68 QTSTNEFVLRKKVPASRELDALILSIEETEYLTGSRVQSIEFNNY 112 >gi|240144531|ref|ZP_04743132.1| aldose epimerase family protein [Roseburia intestinalis L1-82] gi|257203440|gb|EEV01725.1| aldose epimerase family protein [Roseburia intestinalis L1-82] gi|291538063|emb|CBL11174.1| Galactose mutarotase and related enzymes [Roseburia intestinalis XB6B4] Length = 302 Score = 40.0 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 26/236 (11%), Positives = 58/236 (24%), Gaps = 11/236 (4%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLR----GY-----HLDVSSNSPIVTLLSPSNTKNAY 120 R L+N +L I+ GA+ + + Y SP++ + Y Sbjct: 12 RYTLENENLKVEIDSFGAEIKSVKRKSDNFEYMWCGDKKYWGRTSPVLFPFVGAPKNKEY 71 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179 + + + + + + ++ F I + Sbjct: 72 RYDGKTYTMGQHGFARDMEFTLEAQTEENISFVLTDTAETCEKYPFHFALHIGYELCKNE 131 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKP-QTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 K+ TV N ++ FS + P N G F + + Sbjct: 132 VKVNWTVENTDTKELYFSIGAHPAFNCPVHGEENKTGYGLKFGGLADTIHHHGNTPDGMA 191 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 + + ++ ++ + +G KF Sbjct: 192 VMEDKVLALKDGCVTFTEGFFDECTYMVEGKQTGEVSLLDREGIPYVTVKFDTPLF 247 >gi|110634954|ref|YP_675162.1| RND family efflux transporter MFP subunit [Mesorhizobium sp. BNC1] gi|110285938|gb|ABG63997.1| efflux transporter, RND family, MFP subunit [Chelativorans sp. BNC1] Length = 405 Score = 40.0 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 7/81 (8%), Positives = 25/81 (30%), Gaps = 3/81 (3%) Query: 5 WNYFVAIALSVII---VYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDR 61 + +A L ++ + + F + + TV +++ + Sbjct: 3 KRFIIAFVLVALVAGALVGFNIFRDRAIQQIFATMQAPTLTVSTSTVEPSTWRPSIEAIG 62 Query: 62 AQALSMSPRVELKNPSLIGSI 82 A + + ++ ++ I Sbjct: 63 TMAAANGVDLTVETNGIVEEI 83 >gi|325912484|ref|ZP_08174875.1| aldose 1-epimerase [Lactobacillus iners UPII 60-B] gi|325478218|gb|EGC81339.1| aldose 1-epimerase [Lactobacillus iners UPII 60-B] Length = 290 Score = 40.0 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 44/161 (27%), Gaps = 10/161 (6%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119 +V ++N L + L GA+ ++ L+ Y L + +N Sbjct: 2 KQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178 Y + + + L + L K + TI+ E Sbjct: 62 YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEETKLVYPYSYTVTITYTLEDT 121 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 I + NN + +S + +N E Sbjct: 122 YLHINYEIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEP 162 >gi|50882002|gb|AAT85571.1| lipase chaperone [Pseudomonas aeruginosa] Length = 340 Score = 39.6 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 21/80 (26%), Gaps = 2/80 (2%) Query: 5 WNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 + I L+ AW + P E V P A Sbjct: 2 KKILLLIPLAFAASLAWFVWLEPSPAPETAPPASPQAGAVHAPPAASAGEAVPAPQVMPA 61 Query: 64 ALSMSPRVELKNPSLIGSIN 83 ++ P + S+ GS + Sbjct: 62 KVAPLPT-SFRGTSVDGSFS 80 >gi|11968053|ref|NP_071939.1| probable palmitoyltransferase ZDHHC6 [Homo sapiens] gi|114632873|ref|XP_508039.2| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes] gi|114632875|ref|XP_001147499.1| PREDICTED: probable palmitoyltransferase ZDHHC6 isoform 2 [Pan troglodytes] gi|114632877|ref|XP_001147573.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes] gi|297687386|ref|XP_002821194.1| PREDICTED: probable palmitoyltransferase ZDHHC6-like isoform 1 [Pongo abelii] gi|297687388|ref|XP_002821195.1| PREDICTED: probable palmitoyltransferase ZDHHC6-like isoform 2 [Pongo abelii] gi|28202106|sp|Q9H6R6|ZDHC6_HUMAN RecName: Full=Probable palmitoyltransferase ZDHHC6; AltName: Full=Transmembrane protein H4; AltName: Full=Zinc finger DHHC domain-containing protein 6; Short=DHHC-6; AltName: Full=Zinc finger protein 376 gi|75042507|sp|Q5REH2|ZDHC6_PONAB RecName: Full=Probable palmitoyltransferase ZDHHC6; AltName: Full=Zinc finger DHHC domain-containing protein 6; Short=DHHC-6 gi|18032261|gb|AAL56663.1|AF267740_1 transmembrane protein H4 [Homo sapiens] gi|10438174|dbj|BAB15187.1| unnamed protein product [Homo sapiens] gi|55726123|emb|CAH89835.1| hypothetical protein [Pongo abelii] gi|119569911|gb|EAW49526.1| zinc finger, DHHC-type containing 6, isoform CRA_a [Homo sapiens] gi|119569913|gb|EAW49528.1| zinc finger, DHHC-type containing 6, isoform CRA_a [Homo sapiens] Length = 413 Score = 39.6 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 13/182 (7%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ML+++ ++ N+ A+ + FV L + P + + K Q Sbjct: 50 HTTGGSVNFIMLINWTVMILYNYFNAMFVGPGFVPLGWKPEISQDTMYLQYCKVCQAYKA 109 Query: 398 ELREKFKQSPPQVLQKA-----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 ++ V++ + N + + A V+++ + Sbjct: 110 PRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFVMTMYTQ 169 Query: 453 MRHAPFWGWIK---DLAAA--DPTNIFTLFGILPFYLPGFMHVGIW--PIIMSLSMFIQM 505 + H +GW D++AA DP I FG+ F F I + + FIQM Sbjct: 170 LYHRLSFGWNTVKIDMSAARRDPLPIVP-FGLAAFATTLFALGLALGTTIAVGMLFFIQM 228 Query: 506 KM 507 K+ Sbjct: 229 KI 230 >gi|312875756|ref|ZP_07735751.1| aldose 1-epimerase [Lactobacillus iners LEAF 2053A-b] gi|311088748|gb|EFQ47197.1| aldose 1-epimerase [Lactobacillus iners LEAF 2053A-b] Length = 290 Score = 39.6 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 44/161 (27%), Gaps = 10/161 (6%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119 +V ++N L + L GA+ ++ L+ Y L + +N Sbjct: 2 EQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRRAPVLFPFIGRSYENK 61 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178 Y + + + L + L K + TI+ E Sbjct: 62 YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEETKLVYPYSYTVTITYTLEDT 121 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 I + NN + +S + +N E Sbjct: 122 YLHINYEIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEP 162 >gi|332212833|ref|XP_003255524.1| PREDICTED: probable palmitoyltransferase ZDHHC6 [Nomascus leucogenys] Length = 413 Score = 39.6 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 13/182 (7%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ML+++ ++ N+ A+ + FV L + P + + K Q Sbjct: 50 HTTGGSVNFIMLINWTVMILYNYFNAMFVGPGFVPLGWKPEISQDTMYLQYCKVCQAYKA 109 Query: 398 ELREKFKQSPPQVLQKA-----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 ++ V++ + N + + A V+++ + Sbjct: 110 PRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFVMTMYTQ 169 Query: 453 MRHAPFWGWIK---DLAAA--DPTNIFTLFGILPFYLPGFMHVGIW--PIIMSLSMFIQM 505 + H +GW D++AA DP I FG+ F F I + + FIQM Sbjct: 170 LYHRLSFGWNTVKIDMSAARRDPLPIVP-FGLAAFATTLFALGLALGTTIAVGMLFFIQM 228 Query: 506 KM 507 K+ Sbjct: 229 KI 230 >gi|316976072|gb|EFV59416.1| putative NSFL1 cofactor p47 [Trichinella spiralis] Length = 771 Score = 39.6 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 71/268 (26%), Gaps = 60/268 (22%) Query: 308 LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGI-AIML 366 ++ AK P + K L + + F M L+ + I Sbjct: 14 VYNNAKGRPMLVQLSKRSLSNEIISLHRFNFLPF--DVMQDLLISIHENCSLPWWACIAG 71 Query: 367 TTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMI---------- 416 T+ K FPL ++A P+I+++ + + + + Sbjct: 72 CTILAKAATFPLMVISQRNSARCALAAPQIEKMLKDLQSKVDEEAFRYSWPTKRKNIVYR 131 Query: 417 --------QLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM------------RHA 456 ++Y ++ +P Q P++ + I E H Sbjct: 132 LNANRIVREIYSKYDFHPGRSYALAYAQFPLWITLSMSIRSIAEPSLLNEGTKTHLGMHE 191 Query: 457 PFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD--- 513 W KDL D T P+++ + + K+ P + Sbjct: 192 GGLFWFKDLTIPDST-------------------LALPVLLGICNYAIFKLHMPVINKVT 232 Query: 514 KGQAMILNW-----MPVVFVFALSSFPA 536 M V + P+ Sbjct: 233 PTMKSRAYIAFGICMSFVLPVISALTPS 260 >gi|146301602|ref|YP_001196193.1| TonB-dependent receptor [Flavobacterium johnsoniae UW101] gi|146156020|gb|ABQ06874.1| SusC-like TonB-dependent receptor [Flavobacterium johnsoniae UW101] Length = 1034 Score = 39.6 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 30/307 (9%), Positives = 74/307 (24%), Gaps = 7/307 (2%) Query: 49 VDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIV 108 + A I S + R ++ N +L L L GY L+ + +S Sbjct: 425 SSANEATNPIALSEYNNSTTERFKI-NGNLFADFTLIKGLVFRTEL-GYDLNFAKSST-- 480 Query: 109 TLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 +P T L+ + + + + I L+ + A + Sbjct: 481 --FAPKYTLGNVNELLNKSFKQQDQSYYWNIKNYLTYNKTISEKHNFTFLLGQEAQESRY 538 Query: 169 ERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKS 228 E T N + G + + Sbjct: 539 EYLSGYRSGEFLNKNFTNLNIGDIDTAVNGNGSGRWSMTSYISRLNYSFSDRYSFSASIR 598 Query: 229 LVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAK 288 S W ++K++ + F + + + + + Sbjct: 599 ADASSNFGPNNKWGYFPSFSGGWTVSNEKFFEPLSNSINYLKFRAGYGTVGNQNIPANRY 658 Query: 289 FSANEITILPGKSITTTNFLFAGAK-EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMF 347 + + P ++ T ++ ++ + + + + Y++ Sbjct: 659 QTILSLLSSPFGGVSPTIDNLGNPNIKWESLKSFNTGFELAMLNNRVKLDFDYYVKNSSD 718 Query: 348 MLMSYFY 354 L Sbjct: 719 FLTKQIN 725 >gi|187735503|ref|YP_001877615.1| glycoside hydrolase family 31 [Akkermansia muciniphila ATCC BAA-835] gi|187425555|gb|ACD04834.1| glycoside hydrolase family 31 [Akkermansia muciniphila ATCC BAA-835] Length = 1311 Score = 39.6 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 23/193 (11%), Positives = 52/193 (26%), Gaps = 8/193 (4%) Query: 44 KQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS 103 +P + + R V + + IN K + F +NL+ + + V Sbjct: 91 AEPEARILADSPRRPVSRLDVDQQGDAVVITTGKVRIEINKKTSLFKVINLKDHSVVVEQ 150 Query: 104 NSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTV------WNLISGKILTPTTPIK 157 SP L T + A+ D ++ + N S +P Sbjct: 151 ASP--VLFGKGKTSFSLKAKPDEYFYGGGVQNGRFSHKGKVISIENQNSWTDGGVASPTP 208 Query: 158 LVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + + T ++ + + N S D+ + + + + Sbjct: 209 FYWSTGGYGVMWHTFKKGQYDFGSREENLVNLSHDENYLDVFFMVSDGPVSLLRDFYQLT 268 Query: 218 EGFIAVLGDKSLV 230 + + Sbjct: 269 GAPVLLPKFAFYQ 281 >gi|310658092|ref|YP_003935813.1| hypothetical protein CLOST_0782 [Clostridium sticklandii DSM 519] gi|308824870|emb|CBH20908.1| conserved exported protein of unknown function [Clostridium sticklandii] Length = 238 Score = 39.6 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 8/77 (10%), Positives = 23/77 (29%), Gaps = 1/77 (1%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ N +AI L + ++ + P + ++ + V +++ Sbjct: 1 MKFKKNALLAIMLGISML-GFAGCSNAPAETTEEPAAQEEPAAQEEPAAPDQVGGVSLEN 59 Query: 61 RAQALSMSPRVELKNPS 77 + V + Sbjct: 60 PILVDKEAKTVTVLTQV 76 >gi|99078581|ref|YP_611839.1| PEP-utilising enzyme, mobile region [Ruegeria sp. TM1040] gi|99035719|gb|ABF62577.1| PEP-utilising enzyme mobile region [Ruegeria sp. TM1040] Length = 1240 Score = 39.6 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 19/146 (13%) Query: 370 FVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAG 429 ++L P+A K ++ + ++ L+ + P +A+ Y H + P+ Sbjct: 325 ISRVLVLPIALKSESDQITLRRHKADLEALKTRLA-HDPMRKARAIRAFYAQHGLTPMRN 383 Query: 430 CWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMH 489 +L + + + E+ + WI DL A DP I + + ++ Sbjct: 384 MAALLFLPLMMLGLQAAERAAAEVAG--GFLWIADLGAPDPMWIAPV--LTCGLAGAYLV 439 Query: 490 VGI--------------WPIIMSLSM 501 + I P + L+M Sbjct: 440 LAIAKSRRAAFLWLVLGLPALFLLTM 465 >gi|224543114|ref|ZP_03683653.1| hypothetical protein CATMIT_02314 [Catenibacterium mitsuokai DSM 15897] gi|224523901|gb|EEF93006.1| hypothetical protein CATMIT_02314 [Catenibacterium mitsuokai DSM 15897] Length = 262 Score = 39.6 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 69/196 (35%), Gaps = 14/196 (7%) Query: 9 VAIALSV-IIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 A+AL + +Q ++ Y ++EE + + + + + + + L+ Sbjct: 18 AAVALLGTAVFCGFQIYHHYAQVEEQTEAFEQMAELVEQAPEEAIPEDTPVSEGEDVLAK 77 Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP-----SNTKNAYFA 122 + L+N ++G I++ G + Y + + N+P L S+ Y Sbjct: 78 YNELYLQNEDMVGWISIAGTKL------NYPVMQTPNNPNFYLKHNFEKAYSDLGTPYIQ 131 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 E +S ++N+ + + K ++ I F+ E+ + + Sbjct: 132 ENCNLSESDNLVIYGHHI--KGGKMFGALEDYKAKSFYEKHKTIQFDTLTEQGEYEIVAV 189 Query: 183 VDTVTNNSIDQIRFSP 198 TV +S + Sbjct: 190 FKTVAYSSEGFRYYDF 205 >gi|229102293|ref|ZP_04233002.1| hypothetical protein bcere0019_14540 [Bacillus cereus Rock3-28] gi|228681194|gb|EEL35362.1| hypothetical protein bcere0019_14540 [Bacillus cereus Rock3-28] Length = 290 Score = 39.6 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE IS + E Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLISYEVEEQNIH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPASKEMFFSIGAHPGFNFPLLDGESFTDY 159 >gi|222150315|ref|YP_002559468.1| hypothetical protein MCCL_0065 [Macrococcus caseolyticus JCSC5402] gi|222119437|dbj|BAH16772.1| hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 175 Score = 39.6 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 6/101 (5%) Query: 1 MERNWNYFVAIALS---VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVL 57 M I+L I+ WQ Y YP E + K I+ + + + Sbjct: 1 MNNRKKLISFISLIVITAAIILLWQWNYQYP--ELSKADIKVIEGKHYKDTDELTRQITE 58 Query: 58 IDDRAQALSMSPRVELKNPSLIGSI-NLKGAQFDDLNLRGY 97 +D++ A S + + ++ L I + + D+ + + Sbjct: 59 LDNKQIASSATTSIVIEEKGLPLVILSSFSGERSDVTYKSF 99 >gi|118100946|ref|XP_417528.2| PREDICTED: similar to circadian clock protein PER3 [Gallus gallus] Length = 1137 Score = 39.6 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 31/111 (27%), Gaps = 10/111 (9%) Query: 68 SPRVELKNPSLIGSINLKGAQFDD-----LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 S R N + + +L + ++ Y V +S V LL+P + Y Sbjct: 110 SERTPKNNDTFVAVFSLLSGRIVHISEQAASILNYKKQVLESSRFVELLAPQDASVFYAH 169 Query: 123 ELD-----YVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILF 168 + + + L V + ++ + + Sbjct: 170 TDQSHLPLWNTESQTASLYEYAQVKSFFCRIRGGKDQEQEMHWYPFRITPY 220 >gi|261884150|ref|ZP_06008189.1| putative inner membrane protein translocase component YidC [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 89 Score = 39.6 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 7/66 (10%), Positives = 20/66 (30%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 +A +S++ + F++ R ++N + + + + Sbjct: 8 QKRLLIATVISILFFITYDYFFIPKRTVDINQTASYAEQNSSSANSAPASQDSINASDSA 67 Query: 64 ALSMSP 69 A S Sbjct: 68 APVTSN 73 >gi|156043869|ref|XP_001588491.1| hypothetical protein SS1G_10938 [Sclerotinia sclerotiorum 1980] gi|154695325|gb|EDN95063.1| hypothetical protein SS1G_10938 [Sclerotinia sclerotiorum 1980 UF-70] Length = 324 Score = 39.6 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 22/96 (22%) Query: 460 GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMI 519 W +L DP V I P ++S S+ + + P + Sbjct: 217 LWFPNLLIPDP-------------------VLILPFMLSGSILLNLSGQGRPKTVFMRRL 257 Query: 520 L---NWMPVVFVFALSSFPAGLIIYWSWSNVISIVQ 552 + + + + P+ +++YW+ S++++ Q Sbjct: 258 MNSLKVVALAIIPLTLQMPSAMLVYWTSSSLLAYGQ 293 >gi|145549303|ref|XP_001460331.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124428160|emb|CAK92934.1| unnamed protein product [Paramecium tetraurelia] Length = 433 Score = 39.6 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 10/88 (11%), Positives = 26/88 (29%), Gaps = 4/88 (4%) Query: 26 VYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLK 85 P+ E ++ + + + L+ + R+ + +I+ Sbjct: 244 EQPKQTEQPKQQPKQEEEDDAPKKKEANPLDLLPPSTFNIDDYKRIFFAEKDIQKNIDTL 303 Query: 86 GAQFD----DLNLRGYHLDVSSNSPIVT 109 A D L L Y+ + ++ Sbjct: 304 FATIDLNGWSLWLVRYNKSENEGKQLIL 331 >gi|229043451|ref|ZP_04191161.1| hypothetical protein bcere0027_14990 [Bacillus cereus AH676] gi|228725829|gb|EEL77076.1| hypothetical protein bcere0027_14990 [Bacillus cereus AH676] Length = 290 Score = 39.6 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 52/156 (33%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T T FE +S + + F Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETKITYTVTSNEETLKKYPYEFELLVSYELDGQSFH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159 >gi|255543108|ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis] gi|223548578|gb|EEF50069.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis] Length = 548 Score = 39.6 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 26/236 (11%), Positives = 68/236 (28%), Gaps = 43/236 (18%) Query: 342 IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELRE 401 + + ++ F++L G ++ + + + K + Sbjct: 102 PVRVLVSVLDEFHDLSGLPWWLVIASATVAMRVTLFPLLVLQLHKLK-KISELFPKLPPP 160 Query: 402 KFKQSPPQVLQKAMIQLYKTHNI----NPLAGCWPILLQIPVFFAIYKVISISLEMRHAP 457 + + +K + L + Q+P F I + H P Sbjct: 161 FPPPLSGKSFVDQISLFHKERRALGCPSYLWFLAYVSAQVPCFLLWMTSIRRM-SLDHHP 219 Query: 458 FW-----GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPA 512 + W ++L P + I+P++++ +I +++ Sbjct: 220 GFDCGGTLWFQNLTEY----------------PHGIAGPIFPLLIACLHYINIQL--AFE 261 Query: 513 DKGQAMILNWMPVV--------------FVFALSSFPAGLIIYWSWSNVISIVQQA 554 + ++ F P G ++YW ++ +S++QQ Sbjct: 262 KFSVQKTTGLLSLLAKYYKLYLDLLTLPLFFIGYCIPQGSLVYWVTNSSLSVIQQM 317 >gi|62897733|dbj|BAD96806.1| zinc finger, DHHC domain containing 6 variant [Homo sapiens] Length = 413 Score = 39.6 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 63/182 (34%), Gaps = 13/182 (7%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ML+++ ++ N+ A+ FV L + P + + K Q Sbjct: 50 HTTGGSVSFIMLINWTIMILYNYFNAMFAGPGFVPLGWKPEISQDTMYLQYCKVCQAYKA 109 Query: 398 ELREKFKQSPPQVLQKA-----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 ++ V++ + N + + A V+++ + Sbjct: 110 PRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFVMTMYTQ 169 Query: 453 MRHAPFWGWIK---DLAAA--DPTNIFTLFGILPFYLPGFMHVGIW--PIIMSLSMFIQM 505 + H +GW D++AA DP I FG+ F F I + + FIQM Sbjct: 170 LYHRLSFGWNTVKIDMSAARRDPLPIVP-FGLAAFATTLFALGLALGTTIAVGMLFFIQM 228 Query: 506 KM 507 K+ Sbjct: 229 KI 230 >gi|228920408|ref|ZP_04083753.1| hypothetical protein bthur0011_14220 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839038|gb|EEM84334.1| hypothetical protein bthur0011_14220 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 290 Score = 39.6 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 50/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N S ++ FS + P +F Sbjct: 124 VTYEVNNPSSKEMFFSIGAHPGFNFPLLDGESFTDY 159 >gi|218895606|ref|YP_002444017.1| internalin protein [Bacillus cereus G9842] gi|218543468|gb|ACK95862.1| internalin protein [Bacillus cereus G9842] Length = 995 Score = 39.6 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 97/341 (28%), Gaps = 35/341 (10%) Query: 1 MERNWN-----YFVAIALS--VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53 M++N +A ALS + Y P + + E + D Sbjct: 1 MKQNKRKRINAMIIAAALSLPFAV-------YSTPALAAVAIEANKTGQGLEDGTYDAVI 53 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A ++++ V +K+P L G + L S+S L Sbjct: 54 KAYKDKTNEESMAA---VYIKDPKLTIE---NGKKIVTATL--------SDSDFFQYLKT 99 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + V + + + + + + A + ++ Sbjct: 100 EDIHTPGVFHDVKVLSEDKKKNGTKVIQFEVGELGKTYNMQMHIYIPTMAYDNKYQVQFE 159 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 ++ + + + N +Q + + + + ++ A + K L++ Sbjct: 160 VNAINLENNVSEKQKENKEEQQDENGNVILDKQLQKYINKYNLDRDNVDAPITKKDLLQI 219 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 K I N ++ +K + +E++ +Y S + Sbjct: 220 KTLSIYSGKGINEIAGLEYMTNLEK------LTLRESNVTDISAISKLRSLKYVDLTSNS 273 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 +I P + N LF + + K I +++ Sbjct: 274 IESIHPIGQLENINMLFLRDNKISDLTPLSKMKKIKTLDLI 314 >gi|229096182|ref|ZP_04227155.1| hypothetical protein bcere0020_14300 [Bacillus cereus Rock3-29] gi|228687142|gb|EEL41047.1| hypothetical protein bcere0020_14300 [Bacillus cereus Rock3-29] Length = 290 Score = 39.6 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE IS + E Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLISYEVEEQNIH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPASKEMFFSIGAHPGFNFPLLDGESFTDY 159 >gi|229115137|ref|ZP_04244547.1| hypothetical protein bcere0017_14320 [Bacillus cereus Rock1-3] gi|228668277|gb|EEL23709.1| hypothetical protein bcere0017_14320 [Bacillus cereus Rock1-3] Length = 290 Score = 39.6 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE IS + E Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLISYEVEEQNIH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPASKEMFFSIGAHPGFNFPLLDGESFTDY 159 >gi|309810059|ref|ZP_07703905.1| aldose 1-epimerase [Lactobacillus iners SPIN 2503V10-D] gi|329921006|ref|ZP_08277534.1| aldose 1-epimerase [Lactobacillus iners SPIN 1401G] gi|308169558|gb|EFO71605.1| aldose 1-epimerase [Lactobacillus iners SPIN 2503V10-D] gi|328935282|gb|EGG31762.1| aldose 1-epimerase [Lactobacillus iners SPIN 1401G] Length = 290 Score = 39.6 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 45/163 (27%), Gaps = 10/163 (6%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119 +V ++N L + L GA+ ++ L+ Y L + +N Sbjct: 2 EQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178 Y + + + L + L K + TI+ E Sbjct: 62 YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEGTKLVYPYSYTVTITYTLEDT 121 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFI 221 I + NN + +S + +N E + Sbjct: 122 YLHINYDIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEPKL 164 >gi|296388650|ref|ZP_06878125.1| lipase chaperone [Pseudomonas aeruginosa PAb1] Length = 340 Score = 39.2 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 20/80 (25%), Gaps = 2/80 (2%) Query: 5 WNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 + I L+ AW + P E P A Sbjct: 2 KKILLLIPLAFAASLAWFVWLEPSPAPETAPPASAQAGADHAPPAASAGEAVPAPQVMPA 61 Query: 64 ALSMSPRVELKNPSLIGSIN 83 ++ P + S+ GS + Sbjct: 62 KVAPLPT-SFRGTSVDGSFS 80 >gi|228938809|ref|ZP_04101409.1| hypothetical protein bthur0008_14700 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971690|ref|ZP_04132311.1| hypothetical protein bthur0003_14670 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978299|ref|ZP_04138676.1| hypothetical protein bthur0002_15030 [Bacillus thuringiensis Bt407] gi|228781316|gb|EEM29517.1| hypothetical protein bthur0002_15030 [Bacillus thuringiensis Bt407] gi|228787780|gb|EEM35738.1| hypothetical protein bthur0003_14670 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820658|gb|EEM66683.1| hypothetical protein bthur0008_14700 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939313|gb|AEA15209.1| LACX protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 290 Score = 39.2 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + Sbjct: 64 DDKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P + +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDSESFTDY 159 >gi|313108009|ref|ZP_07794176.1| lipase modulator protein [Pseudomonas aeruginosa 39016] gi|310880678|gb|EFQ39272.1| lipase modulator protein [Pseudomonas aeruginosa 39016] Length = 340 Score = 39.2 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 21/80 (26%), Gaps = 2/80 (2%) Query: 5 WNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 + I L+ AW + P E + P A Sbjct: 2 KKILLLIPLAFAASLAWFVWLEPSPAPETAPPASAQAGADRAPPAASAGEAVPAPQVMPA 61 Query: 64 ALSMSPRVELKNPSLIGSIN 83 ++ P + S+ GS + Sbjct: 62 KVAPLPT-SFRGTSVDGSFS 80 >gi|311896204|dbj|BAJ28612.1| hypothetical protein KSE_28010 [Kitasatospora setae KM-6054] Length = 258 Score = 39.2 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Query: 360 FGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLY 419 +AI+L T+ V+ PLA+ S + P++ LRE+ P L + ++ L+ Sbjct: 27 TAVAIVLFTLAVRAALHPLARSAARSARARARLVPEVARLRERH-GKDPGRLNREVLALH 85 Query: 420 KTHNINPLAGCWPILLQIPVFFAIYKVI 447 + + P AG P LLQ P F +Y++ Sbjct: 86 RAAGVGPFAGLLPALLQAPFFSVMYRLF 113 >gi|17569119|ref|NP_508771.1| NPC1 (human Niemann Pick C disease) Related family member (ncr-1) [Caenorhabditis elegans] gi|37999494|sp|Q19127|NPC1_CAEEL RecName: Full=Niemann-Pick C1 protein homolog 1; Flags: Precursor gi|15617769|gb|AAA96211.2| Npc1 (human niemann pick c disease) related protein 1 [Caenorhabditis elegans] Length = 1383 Score = 39.2 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 12/78 (15%) Query: 462 IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPII------MSLSMFIQMKMSPPPADKG 515 I L++ IF++FGI P + + ++ M + + Q ++S P Sbjct: 674 INLLSSFCSWGIFSMFGIHPVKNALVVQFFVVTLLGVCRTFMVVKYYAQQRVSMPYMSPD 733 Query: 516 Q-----AMILN-WMPVVF 527 Q M++ MP +F Sbjct: 734 QCPEIVGMVMAGTMPAMF 751 >gi|312870889|ref|ZP_07730994.1| aldose 1-epimerase [Lactobacillus iners LEAF 3008A-a] gi|311093579|gb|EFQ51918.1| aldose 1-epimerase [Lactobacillus iners LEAF 3008A-a] Length = 290 Score = 39.2 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 44/161 (27%), Gaps = 10/161 (6%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119 +V ++N L + L GA+ ++ L+ Y L + +N Sbjct: 2 EQVTIENDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178 Y + + + L + L K + TI+ E Sbjct: 62 YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEGTKLVYPYSYTVTITYTLEDT 121 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 I + NN + +S + +N E Sbjct: 122 YLHINYDIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEP 162 >gi|239633972|gb|ACR84172.1| oxidase assembly 1-like protein [Lepus europaeus] Length = 83 Score = 39.2 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 23/97 (23%) Query: 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM----RHAPFWGWIKDL 465 M K H+I L L Q P F + + + + W +DL Sbjct: 2 KASSEMTLYQKKHDIKLLRPLILPLTQAPXFXSXFIALREXANLPVPSLQTGGLWWFQDL 61 Query: 466 AAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMF 502 DPT I P++++ +M+ Sbjct: 62 TVCDPTY-------------------ILPMVVTATMW 79 >gi|322819138|gb|EFZ26356.1| hypothetical protein TCSYLVIO_7466 [Trypanosoma cruzi] Length = 435 Score = 39.2 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 63/201 (31%), Gaps = 20/201 (9%) Query: 309 FAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 G++ + + ++ F + + + ++ L IAI+L Sbjct: 34 VVGSEPQNYLEYLDRFWNRQWFGATENLLPLPDASPFADLFVTCQETLGLEPAIAILLFG 93 Query: 369 VFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKA-------------- 414 +L + ++ M+N ++ E F++ + A Sbjct: 94 ALSRLCTLYFSLYGERASERMRNAMRRLKAPHEAFQRVYYREGSAALDIQLAATALKGER 153 Query: 415 MIQLYKTHNINPLAGCWPILLQIPV-FFAIYKVISISLEMR---HAPFWGWIKDLAAADP 470 + NP C+ LL PV FF I + ++ + R + W L DP Sbjct: 154 RRVFLEEKTSNP--QCFSSLLGTPVVFFGIVQTTAMCGDPRLDFGTSSFLWCPALTMPDP 211 Query: 471 TNIFTLFGILPFYLPGFMHVG 491 + L + + + + Sbjct: 212 YGVLPLAFCVLTLMNFELSIS 232 >gi|228926729|ref|ZP_04089797.1| hypothetical protein bthur0010_14450 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228832842|gb|EEM78411.1| hypothetical protein bthur0010_14450 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 290 Score = 39.2 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + + Sbjct: 64 DDKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEDESFTDY 159 >gi|300117383|ref|ZP_07055173.1| putative lacX protein [Bacillus cereus SJ1] gi|298725218|gb|EFI65870.1| putative lacX protein [Bacillus cereus SJ1] Length = 302 Score = 39.2 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + Sbjct: 64 DGKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159 >gi|315613348|ref|ZP_07888257.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296] gi|315314583|gb|EFU62626.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296] Length = 416 Score = 39.2 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 21/242 (8%), Positives = 64/242 (26%), Gaps = 7/242 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M++N ++ + L + I + F + + + +K + + + Sbjct: 1 MKKNAILYLGVVLLLAIFLLFSLFINRKESKHQEVQSTTTEVIKSDFEDISGDYISSTGE 60 Query: 61 RAQALSMSP--RVELKNP--SLIGSINL---KGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 +A + R+ ++ G + K D + + I L++ Sbjct: 61 KATVAKNNQNWRISYNTDEGNVFGDFSTDWKKDGNNRSSVTEFNKSDGNKDFKISILVNN 120 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + + + N E+ ++ + K + +N E+ I+ Sbjct: 121 VDDSSNILTVITLSDGNKNHEMVFASRTDYFKNSKDNILQGDLSAFEGTYSNDYLEKAIA 180 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 L+ + + + + + + + Sbjct: 181 ESNFTLYGYSPEDYFEDKTSVFPKISKQEGNWLFWSGSTHAQFKLDKSKKPKKNNGYYEV 240 Query: 234 YS 235 Y Sbjct: 241 YF 242 >gi|326633726|gb|ADZ99606.1| LipB [Pseudomonas aeruginosa] Length = 283 Score = 39.2 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 21/80 (26%), Gaps = 2/80 (2%) Query: 5 WNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 + I L+ AW + P E + P A Sbjct: 2 KKILLLIPLAFAASLAWFVWLEPSPAPETAPPASPQAGADRAPPAASAGEAVPAPQVMPA 61 Query: 64 ALSMSPRVELKNPSLIGSIN 83 ++ P + S+ GS + Sbjct: 62 KVAPLPT-SFRGTSVDGSFS 80 >gi|1752732|dbj|BAA09136.1| lipase modulator protein [Pseudomonas aeruginosa] gi|2575870|dbj|BAA23129.1| proposal modulator or activator protein for lipase [Pseudomonas aeruginosa] Length = 340 Score = 39.2 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 21/80 (26%), Gaps = 2/80 (2%) Query: 5 WNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 + I L+ AW + P E + P A Sbjct: 2 KKILLLIPLAFAASLAWFVWLEPSPAPETAPPASPQAGADRAPPAASAGEAVPAPQVMPA 61 Query: 64 ALSMSPRVELKNPSLIGSIN 83 ++ P + S+ GS + Sbjct: 62 KVAPLPT-SFRGTSVDGSFS 80 >gi|85718182|gb|ABC75105.1| lipase [Pseudomonas aeruginosa] Length = 340 Score = 39.2 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 21/80 (26%), Gaps = 2/80 (2%) Query: 5 WNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 + I L+ AW + P E + P A Sbjct: 2 KKILLLIPLAFAASLAWFVWLEPSPAPETAPPASPQAGADRAPPAASAGEAVPAPQVMPA 61 Query: 64 ALSMSPRVELKNPSLIGSIN 83 ++ P + S+ GS + Sbjct: 62 KVAPLPT-SFRGTSVDGSFS 80 >gi|107102412|ref|ZP_01366330.1| hypothetical protein PaerPA_01003474 [Pseudomonas aeruginosa PACS2] gi|14549161|sp|Q01725|LIFO_PSEAE RecName: Full=Lipase chaperone; AltName: Full=Lipase foldase; AltName: Full=Lipase helper protein; AltName: Full=Lipase modulator gi|159157939|dbj|BAF92629.1| lipase-specific foldase [Pseudomonas aeruginosa] Length = 340 Score = 39.2 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 21/80 (26%), Gaps = 2/80 (2%) Query: 5 WNYFVAIALSVIIVYAWQNFYVY-PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 + I L+ AW + P E + P A Sbjct: 2 KKILLLIPLAFAASLAWFVWLEPSPAPETAPPASPQAGADRAPPAASAGEAVPAPQVMPA 61 Query: 64 ALSMSPRVELKNPSLIGSIN 83 ++ P + S+ GS + Sbjct: 62 KVAPLPT-SFRGTSVDGSFS 80 >gi|307191338|gb|EFN74947.1| Sortilin-related receptor [Camponotus floridanus] Length = 2187 Score = 39.2 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 92/303 (30%), Gaps = 31/303 (10%) Query: 28 PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGS---INL 84 P+IE + +T +P + S A + + + S + S I+ Sbjct: 641 PKIESVTESITEKETTTEPVSIIESTATTIDEADDVTSKTELHYLMSTESHLESNTEISN 700 Query: 85 KGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNI----------- 133 + L + S S LL +N + + + T+ N Sbjct: 701 QSGSIIKSVLDDANTTDISKS-FTDLLRENNNSKIDESSITTIKTSENPIDDDIYKVIPL 759 Query: 134 ---ELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS----------LDEHYLF 180 +L N+ ++ + +I T T ++ + I TI L + Sbjct: 760 TLTKLNNNKSIDTNDNVEIKTELTTMQSYTNKDDKINESTTIEASFTTLSYEDLKQDSDI 819 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + NS + G + ++ T G + E + + Sbjct: 820 ISNQSRNENSNTEQFTQNPGLQEEKENESTTEINLNVNLS---DGSTIIKEFDSTTMSII 876 Query: 241 SISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGK 300 SI N ES + ++DKY+ ++ I + + ++ +++ Sbjct: 877 SIENRTESITRTTVNDKYFHTIEINDVGNRNQEMYNNSKVHETTMIPETTSTDMSTQSIS 936 Query: 301 SIT 303 + + Sbjct: 937 NYS 939 >gi|254740944|ref|ZP_05198632.1| putative lacX protein [Bacillus anthracis str. Kruger B] Length = 302 Score = 39.2 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + + Sbjct: 64 DDKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159 >gi|126741126|ref|ZP_01756807.1| phosphoenolpyruvate synthetase-related protein [Roseobacter sp. SK209-2-6] gi|126717763|gb|EBA14484.1| phosphoenolpyruvate synthetase-related protein [Roseobacter sp. SK209-2-6] Length = 1285 Score = 39.2 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 65/210 (30%), Gaps = 27/210 (12%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 + + + + + + + + +V +++ P+A K Sbjct: 325 QQATLWQQAISALSSALLWVHER-AHLLLGLFALSVLTRIIVLPVALKSERDQITTAESA 383 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 ++D L+ K P +A+ Y + P+ +L + + S E Sbjct: 384 EELDTLK-KNLAQDPIRKARAIQDFYARKGLTPMRNLIALLFLPVMMLGVSAAGEASKE- 441 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + + W+ DL AD + F + + IW + Sbjct: 442 -TSVSFLWLNDLGVADHS-----FALPVLFCALAAVYLIWAV---------------AKT 480 Query: 514 KGQAM--ILNWMPVVFVFALSSFPAGLIIY 541 QA I +P++F + S A IY Sbjct: 481 PRQAKLWICLGVPILFA-MVFSLSAAANIY 509 >gi|75759687|ref|ZP_00739770.1| Aldose 1-epimerase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218896628|ref|YP_002445039.1| putative lacX protein [Bacillus cereus G9842] gi|228900278|ref|ZP_04064508.1| hypothetical protein bthur0014_14840 [Bacillus thuringiensis IBL 4222] gi|74492834|gb|EAO55967.1| Aldose 1-epimerase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218545761|gb|ACK98155.1| putative lacX protein [Bacillus cereus G9842] gi|228859313|gb|EEN03743.1| hypothetical protein bthur0014_14840 [Bacillus thuringiensis IBL 4222] Length = 290 Score = 39.2 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE IS + E Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTNNEETLKKYPYEFELLISYELEGQSVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159 >gi|228932979|ref|ZP_04095842.1| hypothetical protein bthur0009_14500 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826580|gb|EEM72351.1| hypothetical protein bthur0009_14500 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 290 Score = 39.2 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + + Sbjct: 64 DDKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159 >gi|228945297|ref|ZP_04107652.1| hypothetical protein bthur0007_14600 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814269|gb|EEM60535.1| hypothetical protein bthur0007_14600 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 290 Score = 39.2 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + + Sbjct: 64 DDKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159 >gi|315653130|ref|ZP_07906055.1| aldose epimerase [Lactobacillus iners ATCC 55195] gi|315489495|gb|EFU79132.1| aldose epimerase [Lactobacillus iners ATCC 55195] Length = 290 Score = 38.8 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 44/161 (27%), Gaps = 10/161 (6%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119 +V +KN L + L GA+ ++ L+ Y L + +N Sbjct: 2 EQVTIKNDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178 Y + + + L + L K + TI+ E Sbjct: 62 YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEETKLVYPYSYTVTITYTLEDT 121 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 I + NN + +S + +N E Sbjct: 122 YLHINYEIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEP 162 >gi|30261694|ref|NP_844071.1| lacX protein, putative [Bacillus anthracis str. Ames] gi|47526909|ref|YP_018258.1| lacX protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49184523|ref|YP_027775.1| lacX protein [Bacillus anthracis str. Sterne] gi|49477290|ref|YP_035812.1| lacX protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|165869513|ref|ZP_02214172.1| putative lacX protein [Bacillus anthracis str. A0488] gi|167639114|ref|ZP_02397387.1| putative lacX protein [Bacillus anthracis str. A0193] gi|170706465|ref|ZP_02896925.1| putative lacX protein [Bacillus anthracis str. A0389] gi|177650440|ref|ZP_02933407.1| putative lacX protein [Bacillus anthracis str. A0174] gi|196033619|ref|ZP_03101031.1| putative lacX protein [Bacillus cereus W] gi|218902809|ref|YP_002450643.1| putative lacX protein [Bacillus cereus AH820] gi|227815553|ref|YP_002815562.1| putative lacX protein [Bacillus anthracis str. CDC 684] gi|229601501|ref|YP_002866098.1| putative lacX protein [Bacillus anthracis str. A0248] gi|254683183|ref|ZP_05147044.1| putative lacX protein [Bacillus anthracis str. CNEVA-9066] gi|254723772|ref|ZP_05185558.1| putative lacX protein [Bacillus anthracis str. A1055] gi|254734535|ref|ZP_05192247.1| putative lacX protein [Bacillus anthracis str. Western North America USA6153] gi|254755186|ref|ZP_05207220.1| putative lacX protein [Bacillus anthracis str. Vollum] gi|254759722|ref|ZP_05211746.1| putative lacX protein [Bacillus anthracis str. Australia 94] gi|30255922|gb|AAP25557.1| putative lacX protein [Bacillus anthracis str. Ames] gi|47502057|gb|AAT30733.1| putative lacX protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49178450|gb|AAT53826.1| lacX protein, putative [Bacillus anthracis str. Sterne] gi|49328846|gb|AAT59492.1| lacX protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164714953|gb|EDR20471.1| putative lacX protein [Bacillus anthracis str. A0488] gi|167512904|gb|EDR88277.1| putative lacX protein [Bacillus anthracis str. A0193] gi|170128563|gb|EDS97430.1| putative lacX protein [Bacillus anthracis str. A0389] gi|172083584|gb|EDT68644.1| putative lacX protein [Bacillus anthracis str. A0174] gi|195994053|gb|EDX58009.1| putative lacX protein [Bacillus cereus W] gi|218537955|gb|ACK90353.1| putative lacX protein [Bacillus cereus AH820] gi|227004363|gb|ACP14106.1| putative lacX protein [Bacillus anthracis str. CDC 684] gi|229265909|gb|ACQ47546.1| putative lacX protein [Bacillus anthracis str. A0248] Length = 290 Score = 38.8 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + + Sbjct: 64 DDKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159 >gi|52143764|ref|YP_083065.1| lacX protein [Bacillus cereus E33L] gi|51977233|gb|AAU18783.1| lacX protein [Bacillus cereus E33L] Length = 290 Score = 38.8 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + + Sbjct: 64 DDKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159 >gi|148360931|ref|YP_001252138.1| hypothetical protein LPC_2891 [Legionella pneumophila str. Corby] gi|148282704|gb|ABQ56792.1| IcmG (DotF) [Legionella pneumophila str. Corby] Length = 268 Score = 38.8 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 29/102 (28%), Gaps = 14/102 (13%) Query: 2 ERNWNYFVAIALSVII-----VYAWQNFYVYP---------RIEEMNNERKNIQTVKQPN 47 + N +AI V I + W F + +QT+ Sbjct: 47 DIKRNALIAIGAVVFIMVMYKIIGWMFFSDKSSQVTTKPAIPPVTQVATPQPVQTIPTTT 106 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89 + +I+D +EL SL +N G Q Sbjct: 107 PIQQVQPTTIIEDDPDLKKKVSAIELTQQSLRSEVNALGEQI 148 >gi|54293445|ref|YP_125860.1| hypothetical protein lpl0494 [Legionella pneumophila str. Lens] gi|53753277|emb|CAH14724.1| hypothetical protein lpl0494 [Legionella pneumophila str. Lens] Length = 269 Score = 38.8 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 14/105 (13%) Query: 2 ERNWNYFVAI---ALSVII--VYAWQNFYVYP---------RIEEMNNERKNIQTVKQPN 47 + N +AI L +++ + W F + +QT+ Sbjct: 48 DIKRNALIAIGAVVLIMVMYKIIGWMFFSDKSSQVTSKPAIPPVTQVATPQPVQTIPTTT 107 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDL 92 + +I+D + +E+ SL +N G Q + + Sbjct: 108 PIQQVQPTTIIEDDSDLKKKVSAIEMTQQSLRSEVNALGEQINTV 152 >gi|229166533|ref|ZP_04294286.1| hypothetical protein bcere0007_15050 [Bacillus cereus AH621] gi|228616937|gb|EEK74009.1| hypothetical protein bcere0007_15050 [Bacillus cereus AH621] Length = 290 Score = 38.8 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + + Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETNITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159 >gi|229011010|ref|ZP_04168204.1| hypothetical protein bmyco0001_14620 [Bacillus mycoides DSM 2048] gi|228750182|gb|EEM00014.1| hypothetical protein bmyco0001_14620 [Bacillus mycoides DSM 2048] Length = 290 Score = 38.8 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + + Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETNITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159 >gi|227524200|ref|ZP_03954249.1| RND superfamily resistance-nodulation-cell division:proton (H+) antiporter [Lactobacillus hilgardii ATCC 8290] gi|227088431|gb|EEI23743.1| RND superfamily resistance-nodulation-cell division:proton (H+) antiporter [Lactobacillus hilgardii ATCC 8290] Length = 984 Score = 38.8 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 5/84 (5%) Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 + + + V +L + KDL+A D + ++ L + F+ V Sbjct: 310 VGVAILLAVLLTFNMFFMSTL---GEKLFWPSKDLSAHDRSFLWNLLSKITLS-HTFVMV 365 Query: 491 GIWPIIMSLSMFI-QMKMSPPPAD 513 GI I +F +++ AD Sbjct: 366 GILVIAAIPLLFFGTQQLNFNNAD 389 >gi|196038957|ref|ZP_03106264.1| putative lacX protein [Bacillus cereus NVH0597-99] gi|228914273|ref|ZP_04077888.1| hypothetical protein bthur0012_15050 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229090654|ref|ZP_04221887.1| hypothetical protein bcere0021_14780 [Bacillus cereus Rock3-42] gi|301053233|ref|YP_003791444.1| lacX protein [Bacillus anthracis CI] gi|196030102|gb|EDX68702.1| putative lacX protein [Bacillus cereus NVH0597-99] gi|228692596|gb|EEL46322.1| hypothetical protein bcere0021_14780 [Bacillus cereus Rock3-42] gi|228845267|gb|EEM90303.1| hypothetical protein bthur0012_15050 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300375402|gb|ADK04306.1| lacX protein [Bacillus cereus biovar anthracis str. CI] Length = 290 Score = 38.8 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + + Sbjct: 64 DGKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159 >gi|229058325|ref|ZP_04196710.1| hypothetical protein bcere0026_14380 [Bacillus cereus AH603] gi|228719999|gb|EEL71588.1| hypothetical protein bcere0026_14380 [Bacillus cereus AH603] Length = 290 Score = 38.8 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + + Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETNITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159 >gi|227512984|ref|ZP_03943033.1| possible RND superfamily resistance-nodulation-cell division:proton (H+) antiporter [Lactobacillus buchneri ATCC 11577] gi|227083741|gb|EEI19053.1| possible RND superfamily resistance-nodulation-cell division:proton (H+) antiporter [Lactobacillus buchneri ATCC 11577] Length = 984 Score = 38.8 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 5/84 (5%) Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 + + + V +L + KDL+A D + ++ L + F+ V Sbjct: 310 VGVAILLAVLLTFNMFFMSTL---GEKLFWPSKDLSAHDRSFLWNLLSKITLS-HTFVMV 365 Query: 491 GIWPIIMSLSMFI-QMKMSPPPAD 513 GI I +F +++ AD Sbjct: 366 GILVIAAIPLLFFGTQQLNFNNAD 389 >gi|301299971|ref|ZP_07206197.1| LPXTG-motif cell wall anchor domain protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852426|gb|EFK80084.1| LPXTG-motif cell wall anchor domain protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 962 Score = 38.8 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 32/339 (9%), Positives = 74/339 (21%), Gaps = 16/339 (4%) Query: 32 EMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDD 91 + + + Q D A R + + + + + K AQ + Sbjct: 221 KAEAQVNKDKQDVAKAQTDLDNAIAADATRQTNIDNAQK-TVDTTKSNVDFSTKQAQEME 279 Query: 92 LNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151 L Y + V L+ A ++ ++ + + W S + + Sbjct: 280 DQLNKYQGIKDAAQKEVDDLNDK------LANVNTITINDVKAYKKAFNDWYTGSKRGVN 333 Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 T K + + + + D+ + I + + FS Sbjct: 334 WTEEDKNFLNDFMSSNTYKGNAADKDIVVDINHLTADQIKELSLFSADLLNQVRNQLGLP 393 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISD--KYWASVFIPSKET 269 + D + + G+ ++ Sbjct: 394 KVIVTEGSLKLAKDVTDNYVSDNWDKYDHDVEGISRAAKENGLLTGGNFYEDAI------ 447 Query: 270 SFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPR 329 F S F S F+ I G I+ ++ Sbjct: 448 -FSSAFSEKSTMDDLKNILFTGIVSMIGGYGDEMLHAAGLLGVNFGDDINTGKEQYFSAG 506 Query: 330 FEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTT 368 M ++ K + + + Sbjct: 507 TSMFPIKEDQMWVTKMGHFFNVSKDYINDSAKFSTTEVP 545 >gi|207108416|ref|ZP_03242578.1| putative inner membrane protein translocase component YidC [Helicobacter pylori HPKX_438_CA4C1] Length = 35 Score = 38.8 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 20/33 (60%) Query: 541 YWSWSNVISIVQQAVIMKMHGAEIGLIDRLRST 573 YW+ +N++S++QQ +I K+ + + + + Sbjct: 2 YWTTNNILSVLQQLIINKVLENKKRMHAQNKKE 34 >gi|229069250|ref|ZP_04202540.1| hypothetical protein bcere0025_14550 [Bacillus cereus F65185] gi|228713737|gb|EEL65622.1| hypothetical protein bcere0025_14550 [Bacillus cereus F65185] Length = 290 Score = 38.8 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNIEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + + N + ++ FS + P +F Sbjct: 124 VTYEINNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159 >gi|229016981|ref|ZP_04173901.1| hypothetical protein bcere0030_15460 [Bacillus cereus AH1273] gi|229023162|ref|ZP_04179673.1| hypothetical protein bcere0029_15040 [Bacillus cereus AH1272] gi|228738087|gb|EEL88572.1| hypothetical protein bcere0029_15040 [Bacillus cereus AH1272] gi|228744252|gb|EEL94334.1| hypothetical protein bcere0030_15460 [Bacillus cereus AH1273] Length = 290 Score = 38.8 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + + Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEGESFTDY 159 >gi|227510053|ref|ZP_03940102.1| RND superfamily resistance-nodulation-cell division:proton (H+) antiporter [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190432|gb|EEI70499.1| RND superfamily resistance-nodulation-cell division:proton (H+) antiporter [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 984 Score = 38.8 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 5/84 (5%) Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHV 490 + + + V +L + KDL+A D + ++ L + F+ V Sbjct: 310 VGVAILLAVLLTFNMFFMSTL---GEKLFWPSKDLSAHDRSFLWNLLSKITLS-HTFVMV 365 Query: 491 GIWPIIMSLSMFI-QMKMSPPPAD 513 GI I +F +++ AD Sbjct: 366 GILVIAAIPLLFFGTQQLNFNNAD 389 >gi|297588604|ref|ZP_06947247.1| conserved hypothetical protein [Finegoldia magna ATCC 53516] gi|297573977|gb|EFH92698.1| conserved hypothetical protein [Finegoldia magna ATCC 53516] Length = 1214 Score = 38.8 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 72/235 (30%), Gaps = 4/235 (1%) Query: 24 FYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSIN 83 ++ ++ E +N ++ N + S A A ++ N +I+ Sbjct: 183 DFLNKKLAEKKPAAENTPAAEETNALGISEETKREAVAASADEKREPKDISNEVTDVNIS 242 Query: 84 LKGAQFDDLNLRGYHLDVSSNSPIVTLLSP-SNTKNAYFAELDYVSTANNIELPNSNTVW 142 +KG +D + + + T +T+ + TA + + Sbjct: 243 IKGLDNEDATMIK-PIAEDPDIKGKTFNDQLYDTQAMAHVDFRVPDTAVAGDTIDIKLSP 301 Query: 143 NLISGKILTPTTPIKLVFKNANNILFERTISLDEH-YLFKIVDTVTNNSIDQIRFSPRGR 201 N+ I++ P L K + ++ + + + + D V N +I Sbjct: 302 NVNPNGIVSDFNPEALDAKIGSEVVGKAYYDKENSLMRYTLTDLVKNYGNVKIVSEFPLF 361 Query: 202 IMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISD 256 I + K + + + Y+ + + SN + I+ Sbjct: 362 IDKEKVTEPVSD-QKVSVSVGNKTQEKTYTVDYNMSDVGQKNKKFVSNGYSDITH 415 >gi|229189779|ref|ZP_04316792.1| hypothetical protein bcere0002_14550 [Bacillus cereus ATCC 10876] gi|228593693|gb|EEK51499.1| hypothetical protein bcere0002_14550 [Bacillus cereus ATCC 10876] Length = 290 Score = 38.8 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159 >gi|218235409|ref|YP_002366380.1| putative lacX protein [Bacillus cereus B4264] gi|218163366|gb|ACK63358.1| putative lacX protein [Bacillus cereus B4264] Length = 290 Score = 38.8 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNIEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159 >gi|228952077|ref|ZP_04114172.1| hypothetical protein bthur0006_14880 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807609|gb|EEM54133.1| hypothetical protein bthur0006_14880 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 290 Score = 38.8 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNIEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159 >gi|118477134|ref|YP_894285.1| lacX protein [Bacillus thuringiensis str. Al Hakam] gi|118416359|gb|ABK84778.1| lacX protein [Bacillus thuringiensis str. Al Hakam] Length = 290 Score = 38.8 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 52/158 (32%), Gaps = 10/158 (6%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAY 120 + ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y Sbjct: 2 TLTIQNEKVIVSISDKGAELQSIRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTY 61 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179 + + S + + S +T FE +S + + + Sbjct: 62 YVDGKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQI 121 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 122 VHVTYEVNNPTSKEMFFSIGAHPGFNFPLLEDESFTDY 159 >gi|25145427|ref|NP_500037.2| hypothetical protein Y55F3AR.1 [Caenorhabditis elegans] gi|21913077|gb|AAF60807.2| Hypothetical protein Y55F3AR.1 [Caenorhabditis elegans] Length = 317 Score = 38.8 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 85/275 (30%), Gaps = 59/275 (21%) Query: 317 TIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFF 376 TI P + +IA+ + M + L ++ A + + +++ Sbjct: 28 TISRRNMSALPPAIAPAFQYASDCYIAQSIQFGMESLHGLGLSWPGAFISAAILLRIGTA 87 Query: 377 PLAKKQYVSTANMKNIQP-----KIDELREKFK---------------QSPPQVLQKAMI 416 PL AN + Q + ++ E+++ S P++ + Sbjct: 88 PLHIYAEKLFANRLHAQNFLTQGIMKKVSERYRVQLGPSTDGTKLEVKSSDPKIAKATQD 147 Query: 417 QLYKTHNINPLAGCWPILLQ------IPVFFAIYKVISISLEMRHAPFW---GWIKDLAA 467 L + + G +Q +PV+ + + P WI D+ A Sbjct: 148 ALQEVPAMLAEHGLQAARIQNLKMCTVPVWIFSSFALRNVINSDFHPSVAGHLWIPDMLA 207 Query: 468 ADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFI---QMKMSPPPADKG---QAM--- 518 DP I P+ + + F+ + P K Q Sbjct: 208 PDPYF-------------------ILPVAVGVFGFLNLYSQRKIYPGVVKMTWKQKSYDG 248 Query: 519 ILNWMPVVFVF-ALSSFPAGLIIYWSWSNVISIVQ 552 +L + +F ++ PA + +YW + + Q Sbjct: 249 VLAFFT-MFAVTIMAQLPACIPLYWLIVSTTGMAQ 282 >gi|120611066|ref|YP_970744.1| zonular occludens toxin [Acidovorax citrulli AAC00-1] gi|120589530|gb|ABM32970.1| Zonular occludens toxin [Acidovorax citrulli AAC00-1] Length = 478 Score = 38.8 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 2/62 (3%) Query: 9 VAIALSVI--IVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 + ALS + I WQ F P ++ + + ++ VD + +A ++ Sbjct: 261 IMFALSGVGFIWLGWQIFGPAPEPKKPVQQPAKLMVMQGGKLVDPTASASPAARPQAVVA 320 Query: 67 MS 68 + Sbjct: 321 TA 322 >gi|296106003|ref|YP_003617703.1| IcmG (DotF) [Legionella pneumophila 2300/99 Alcoy] gi|46398531|gb|AAS91951.1| IcmG protein [Legionella pneumophila] gi|46398541|gb|AAS91956.1| IcmG protein [Legionella pneumophila] gi|46398547|gb|AAS91959.1| IcmG protein [Legionella pneumophila] gi|295647904|gb|ADG23751.1| IcmG (DotF) [Legionella pneumophila 2300/99 Alcoy] Length = 269 Score = 38.8 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 29/102 (28%), Gaps = 14/102 (13%) Query: 2 ERNWNYFVAIALSVII-----VYAWQNFYVYP---------RIEEMNNERKNIQTVKQPN 47 + N +AI V I + W F + +QT+ Sbjct: 48 DIKRNALIAIGAVVFIMVMYKIIGWMFFSDKSSQVTTKPAIPPVTQVATPQPVQTIPTTT 107 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89 + +I+D +EL SL +N G Q Sbjct: 108 PIQQVQPTTIIEDDPDLKKKVSAIELTQQSLRSEVNALGEQI 149 >gi|270296999|ref|ZP_06203198.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270272986|gb|EFA18849.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 1073 Score = 38.4 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 22/213 (10%), Positives = 48/213 (22%), Gaps = 10/213 (4%) Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A + V P + + + + + ++ P Sbjct: 750 KEATAQQPATSKEEGNLVAFSGPDFKATFDKQSGLLTSYLYKKHEYILNGQGPRP-FFWR 808 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + T N Y A L A + TT + ++ T Sbjct: 809 APTDNDYGANLPVRLKAWKEASYQEPKAESFQVTPGSNATTIKVTYRFPQTDARWDITYK 868 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV--- 230 + + K+ + G M+ T+ + ++ Sbjct: 869 IYASGVIKVDNRFVAEGDQAPMIPRVGLRMQLPESFTDLTYYGRGPKENYRDRRTSQFIG 928 Query: 231 ------EQKYSDIEKSSISNFHESNSWLGISDK 257 + Y + +N W +DK Sbjct: 929 EYAIPVKNMYEPYVRPQENNHRTDIYWCAFTDK 961 >gi|229078880|ref|ZP_04211432.1| hypothetical protein bcere0023_15420 [Bacillus cereus Rock4-2] gi|228704294|gb|EEL56728.1| hypothetical protein bcere0023_15420 [Bacillus cereus Rock4-2] Length = 290 Score = 38.4 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNIEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159 >gi|46398525|gb|AAS91948.1| IcmG protein [Legionella pneumophila] gi|46398549|gb|AAS91960.1| IcmG protein [Legionella pneumophila] gi|307609260|emb|CBW98727.1| Dot/Icm secretion system protein [Legionella pneumophila 130b] Length = 269 Score = 38.4 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 32/102 (31%), Gaps = 14/102 (13%) Query: 2 ERNWNYFVAI---ALSVII--VYAWQNFYVYP---------RIEEMNNERKNIQTVKQPN 47 + N +AI L +++ + W F + +QT+ Sbjct: 48 DIKRNALIAIGAVVLIMVMYKIIGWMFFSDKSSQVTSKPAIPPVTQVATPQPVQTIPTTT 107 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89 + +I+D + +E+ SL +N G Q Sbjct: 108 PIQQVQPTTIIEDDSDLKKKVSAIEMTQQSLRSEVNALGEQI 149 >gi|253729791|ref|ZP_04863956.1| leukocidin subunit [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253726449|gb|EES95178.1| leukocidin subunit [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 350 Score = 38.4 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 32/331 (9%), Positives = 84/331 (25%), Gaps = 24/331 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ +A +LS I+ + + ++ + V + Q D + Sbjct: 1 MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + ++ + K +L + D + + V L+ + ++ Sbjct: 61 STAPDDIGKNGKI-TKRTETVYDEKTNILQNLQF-DFIDDPTYD-KNVLLVKKQGSIHSN 117 Query: 121 FAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 + +N S + + +L + + T S Sbjct: 118 LKFESHKEEKNSNWLKYPSEYHVDFQVKRNPKTEILDQLPKNKISTAKVDSTFSYSSGGK 177 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNTFGVQEGFIAVLGDKSLVEQKYSDI 237 F + S + + + + N + V IA L Sbjct: 178 FDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIA----NDLKYGGEVKN 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + + + E SF S+++Y + + + +F Sbjct: 234 RNDELLFYRNTRI-----------ATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEK 282 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + + + + P Sbjct: 283 SNEKTQFEVTY---TRNQDILKNRPGIHYAP 310 >gi|229178105|ref|ZP_04305476.1| hypothetical protein bcere0005_14670 [Bacillus cereus 172560W] gi|228605235|gb|EEK62685.1| hypothetical protein bcere0005_14670 [Bacillus cereus 172560W] Length = 290 Score = 38.4 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSVRLKEDNIEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQSVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159 >gi|156844467|ref|XP_001645296.1| Tkp1 protein [Vanderwaltozyma polyspora DSM 70294] gi|156115956|gb|EDO17438.1| Tkp1 protein [Vanderwaltozyma polyspora DSM 70294] Length = 1295 Score = 38.4 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 89/309 (28%), Gaps = 31/309 (10%) Query: 28 PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGA 87 P I +++ + + NS + +I D +L SP + +I+ G Sbjct: 613 PEIPSLSDSPPALPDQLIDSSPKNSDSGGIIADTTISLDTSPDIS-----HSLAISPSGG 667 Query: 88 QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147 DDL + SS +P+ LSP N+ + + + I ++ Sbjct: 668 TIDDL-------NTSSTNPLSLSLSPQNSNSGGITQTSVSTDLGGIGKEQDSSKKRNREN 720 Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 + KN + +I +I + + + P Sbjct: 721 DENNDKDHLPYWEKNNMS-----SIKFPPKQRRRIHYINS------------VKHAVNNP 763 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 + NT I+ + E Y + + N+W Y P K Sbjct: 764 PSVGNTSMSYRDAISSNQNVREKEL-YRKAYMKELDQLMKHNTWDNSRI-YDVKEVNPKK 821 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + F DG + + ++ N + A + D+ I Sbjct: 822 IINSMIIFTTKRDGTHKCRFVARGDQQNAGTYDDSLIANTIHHEALMTCMAIALDNDMFI 881 Query: 328 PRFEMLIDW 336 + ++ + Sbjct: 882 VQLDISSAY 890 >gi|57650694|ref|YP_186828.1| Aerolysin/leukocidin family protein [Staphylococcus aureus subsp. aureus COL] gi|87162038|ref|YP_494626.1| Aerolysin/leukocidin family protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195915|ref|YP_500726.1| hypothetical protein SAOUHSC_02243 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151222140|ref|YP_001332962.1| leukocidin/hemolysin toxin subunit S [Staphylococcus aureus subsp. aureus str. Newman] gi|161510231|ref|YP_001575890.1| leukocidin subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140350|ref|ZP_03564843.1| leukocidin subunit [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258452369|ref|ZP_05700379.1| leukocidin/hemolysin toxin subunit S [Staphylococcus aureus A5948] gi|262050264|ref|ZP_06023113.1| hypothetical protein SAD30_0411 [Staphylococcus aureus D30] gi|282925005|ref|ZP_06332670.1| conserved hypothetical leukocidin-like protein 2 [Staphylococcus aureus A9765] gi|284025054|ref|ZP_06379452.1| Aerolysin/leukocidin family protein [Staphylococcus aureus subsp. aureus 132] gi|294849560|ref|ZP_06790302.1| leukocidin-like protein 2 [Staphylococcus aureus A9754] gi|304379193|ref|ZP_07361936.1| leukocidin subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|81694126|sp|Q5HEH9|LUKL2_STAAC RecName: Full=Uncharacterized leukocidin-like protein 2; Flags: Precursor gi|122539025|sp|Q2FWN9|LUKL2_STAA8 RecName: Full=Uncharacterized leukocidin-like protein 2; Flags: Precursor gi|123485065|sp|Q2FFA2|LUKL2_STAA3 RecName: Full=Uncharacterized leukocidin-like protein 2; Flags: Precursor gi|57284880|gb|AAW36974.1| Aerolysin/Leukocidin family protein [Staphylococcus aureus subsp. aureus COL] gi|87128012|gb|ABD22526.1| Aerolysin/Leukocidin family protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203473|gb|ABD31283.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374940|dbj|BAF68200.1| leukocidin/hemolysin toxin family S subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|160369040|gb|ABX30011.1| possible leukocidin subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257859956|gb|EEV82794.1| leukocidin/hemolysin toxin subunit S [Staphylococcus aureus A5948] gi|259161650|gb|EEW46243.1| hypothetical protein SAD30_0411 [Staphylococcus aureus D30] gi|269941479|emb|CBI49876.1| putative leukocidin S subunit [Staphylococcus aureus subsp. aureus TW20] gi|282592699|gb|EFB97706.1| conserved hypothetical leukocidin-like protein 2 [Staphylococcus aureus A9765] gi|294823697|gb|EFG40124.1| leukocidin-like protein 2 [Staphylococcus aureus A9754] gi|302751902|gb|ADL66079.1| leukocidin/lemolysin toxin family protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304342239|gb|EFM08135.1| leukocidin subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315196776|gb|EFU27121.1| possible leukocidin subunit [Staphylococcus aureus subsp. aureus CGS01] gi|320139611|gb|EFW31480.1| beta-channel forming cytolysin [Staphylococcus aureus subsp. aureus MRSA131] gi|320143654|gb|EFW35432.1| beta-channel forming cytolysin [Staphylococcus aureus subsp. aureus MRSA177] gi|329314683|gb|AEB89096.1| Uncharacterized leukocidin-like protein 2 [Staphylococcus aureus subsp. aureus T0131] gi|329724925|gb|EGG61427.1| beta-channel forming cytolysin [Staphylococcus aureus subsp. aureus 21189] Length = 351 Score = 38.4 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 32/331 (9%), Positives = 84/331 (25%), Gaps = 24/331 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ +A +LS I+ + + ++ + V + Q D + Sbjct: 1 MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + ++ + K +L + D + + V L+ + ++ Sbjct: 61 STAPDDIGKNGKI-TKRTETVYDEKTNILQNLQF-DFIDDPTYD-KNVLLVKKQGSIHSN 117 Query: 121 FAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 + +N S + + +L + + T S Sbjct: 118 LKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGK 177 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNTFGVQEGFIAVLGDKSLVEQKYSDI 237 F + S + + + + N + V IA L Sbjct: 178 FDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIA----NDLKYGGEVKN 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + + + E SF S+++Y + + + +F Sbjct: 234 RNDELLFYRNTRI-----------ATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEK 282 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + + + + P Sbjct: 283 SNEKTQFEVTY---TRNQDILKNRPGIHYAP 310 >gi|164687579|ref|ZP_02211607.1| hypothetical protein CLOBAR_01220 [Clostridium bartlettii DSM 16795] gi|164603353|gb|EDQ96818.1| hypothetical protein CLOBAR_01220 [Clostridium bartlettii DSM 16795] Length = 1241 Score = 38.4 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 39/338 (11%), Positives = 87/338 (25%), Gaps = 14/338 (4%) Query: 91 DLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL 150 + + Y+ + + + L S + + NN ++ + Sbjct: 489 EFDFERYNNSQNKDKQGIILFSITKHNDQEREAQKVSKRINNSFYEHNQFKYVNEKKSKN 548 Query: 151 TPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210 + NN+ F R++ D+ + S F + Sbjct: 549 IEIISVVNKNTQENNMTF-RSLDFDDKQIIYQEVLTKEQSEQIHTFIQKSEPFILSGIAG 607 Query: 211 TNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETS 270 + I + +K S I + SN + + + Y+ Sbjct: 608 SGKTISTVKLIPDMVEKIKNMGSDSKILYVTFSNNLKQYVKEKVIESYY----------E 657 Query: 271 FHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRF 330 F+ + + + N I + IT + K +H +D I +F Sbjct: 658 FNEYIDIKTFEDVCTELNYKYNNKKIDRSRIITQNTYKKNFTKFLNYLHQTSRDGNILKF 717 Query: 331 EMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIM---LTTVFVKLLFFPLAKKQYVSTA 387 ++ +L Y I+ + Sbjct: 718 IKKYQKEKNIIYSEIFGILKGSMYVDWDREEKDIVKSEYYINNSNKIVEDYKIFAEEDRE 777 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNIN 425 + +I K ++ + + + + L K NIN Sbjct: 778 ILYSITQKYNQWLVENEYYDINDIAFELQSLIKDKNIN 815 >gi|116622044|ref|YP_824200.1| major facilitator transporter [Candidatus Solibacter usitatus Ellin6076] gi|116225206|gb|ABJ83915.1| major facilitator superfamily MFS_1 [Candidatus Solibacter usitatus Ellin6076] Length = 739 Score = 38.4 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 49/135 (36%), Gaps = 28/135 (20%) Query: 434 LLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAA-ADPTNIFTLFGILP----------- 481 + +F+ ++I+ + +GWI D T P Sbjct: 504 WMHQCLFWGCMLAVAITFPL----VFGWIHFRTLLGDQLTYVTYLFGFPMGAFRLHTITA 559 Query: 482 FYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVF-ALSSFPAGLII 540 + L + + ++ +++ + +M+ A Q ++++P++ +F + GL + Sbjct: 560 WLLFHGLDISALLVLAGIALSLWRRMTDKGARTLQQFGMDFLPIIMLFAISVT---GLAL 616 Query: 541 YWSWSNVISIVQQAV 555 ++ Q+ + Sbjct: 617 --------TVSQEWL 623 >gi|322790714|gb|EFZ15458.1| hypothetical protein SINV_00786 [Solenopsis invicta] Length = 663 Score = 38.4 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 11/120 (9%) Query: 429 GCWPILLQIPVFFA--IYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFYLPG 486 ++Q + +I ++ +R + + N F F + P Sbjct: 183 AILSDVIQGLAMIGVSLVIIIQGTINVRGPANVLNVT--SERGRLNFFN-FDMDPTLRVT 239 Query: 487 FMHVGIWPIIMSLSMF------IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAGLII 540 + + MSLS+F +Q S K ++ MP++ V S+ G++I Sbjct: 240 TTSATLGQLFMSLSIFGCQQNFVQRYCSMSSQSKVVKTMMANMPIIMVLFSLSWIVGMVI 299 >gi|325911632|ref|ZP_08174040.1| aldose 1-epimerase [Lactobacillus iners UPII 143-D] gi|325476618|gb|EGC79776.1| aldose 1-epimerase [Lactobacillus iners UPII 143-D] Length = 290 Score = 38.4 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 44/161 (27%), Gaps = 10/161 (6%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLN-LRG------YHLDVSSNSPIVTLLSP--SNTKNA 119 +V +KN L + L GA+ ++ L+ Y L + +N Sbjct: 2 EQVTIKNDVLAIKVALLGAEVQEVKSLKDNFSYIWYADAKYWGRHAPVLFPFIGRSYENK 61 Query: 120 YFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHY 178 Y + + + L + L K + TI+ E Sbjct: 62 YLIDGKEYNMKQHGFLRDQVFKIVDKQKNKLVLQHSATEGTKLVYPYSYTVTITYTLEDT 121 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG 219 I + NN + +S + +N E Sbjct: 122 YLHINYDIDNNDAKDMYYSFGFHPGFNLNSDLSNYSLQFEP 162 >gi|159130911|gb|EDP56024.1| mitochondrial export translocase Oxa2, putative [Aspergillus fumigatus A1163] Length = 336 Score = 38.4 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 6/54 (11%) Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEI--GLIDRLRSTF----SKNYNSQ 581 P+ L+IYW S I+ +Q ++ + ++ ++ + K S+ Sbjct: 282 MPSALMIYWISSTNIATLQTFLLERFMLSKPLLEPWRQIHIGYPQKGEKTPPSK 335 >gi|228474859|ref|ZP_04059588.1| conserved hypothetical protein [Staphylococcus hominis SK119] gi|228271091|gb|EEK12471.1| conserved hypothetical protein [Staphylococcus hominis SK119] Length = 286 Score = 38.4 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 20/180 (11%), Positives = 51/180 (28%), Gaps = 10/180 (5%) Query: 77 SLIGSINLKG--AQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY----VSTA 130 + G I+ G +D L + L + S IV L + ++ Y+ + +S Sbjct: 62 KVDGVISSNGTRGDIEDKLLFKHSLTIDSAKKIVQL---AQQQHIYYEVFPFEGDRISLI 118 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190 + ++ + N + I D + + + N Sbjct: 119 EDQSWMEDMIDSEHPQNEVSESEWKSRRDAMNGKINW-RKDIPNDAYSKIYLFNKKLNKI 177 Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250 + +++ + + ++ F + V + E K + + Sbjct: 178 KTFRDELIQNKVLLNISVSNSSRFNAETMAYQVDKGTGIKEMIDHFDIKQEETLVIGDSD 237 >gi|253996585|ref|YP_003048649.1| hypothetical protein Mmol_1216 [Methylotenera mobilis JLW8] gi|253983264|gb|ACT48122.1| conserved hypothetical protein [Methylotenera mobilis JLW8] Length = 314 Score = 38.4 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 8/64 (12%), Positives = 21/64 (32%), Gaps = 2/64 (3%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 N +AI +S+++ F+ P++E +++ A Sbjct: 44 RNTLLAIIISILVHLG--IFFFAPKVEFDQPPASPASSIEVSLAPPQKPAVAPQPKIEPP 101 Query: 65 LSMS 68 + + Sbjct: 102 KNET 105 >gi|146189617|emb|CAM91757.1| polyprotein [Vanderwaltozyma polyspora] Length = 1699 Score = 38.4 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 89/309 (28%), Gaps = 31/309 (10%) Query: 28 PRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGA 87 P I +++ + + NS + +I D +L SP + +I+ G Sbjct: 1017 PEIPSLSDSPPALPDQLIDSSPKNSDSGGIIADTTISLDTSPDIS-----HSLAISPSGG 1071 Query: 88 QFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISG 147 DDL + SS +P+ LSP N+ + + + I ++ Sbjct: 1072 TIDDL-------NTSSTNPLSLSLSPQNSNSGGITQTSVSTDLGGIGKEQDSSKKRNREN 1124 Query: 148 KILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKP 207 + KN + +I +I + + + P Sbjct: 1125 DENNDKDHLPYWEKNNMS-----SIKFPPKQRRRIHYINS------------VKHAVNNP 1167 Query: 208 QTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSK 267 + NT I+ + E Y + + N+W Y P K Sbjct: 1168 PSVGNTSMSYRDAISSNQNVREKEL-YRKAYMKELDQLMKHNTWDNSRI-YDVKEVNPKK 1225 Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + F DG + + ++ N + A + D+ I Sbjct: 1226 IINSMIIFTTKRDGTHKCRFVARGDQQNAGTYDDSLIANTIHHEALMTCMAIALDNDMFI 1285 Query: 328 PRFEMLIDW 336 + ++ + Sbjct: 1286 VQLDISSAY 1294 >gi|206967913|ref|ZP_03228869.1| LPXTG-motif cell wall anchor domain protein [Bacillus cereus AH1134] gi|206736833|gb|EDZ53980.1| LPXTG-motif cell wall anchor domain protein [Bacillus cereus AH1134] Length = 1086 Score = 38.4 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 36/360 (10%), Positives = 96/360 (26%), Gaps = 36/360 (10%) Query: 1 MERNWN-----YFVAIALS--VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53 M++N +A ALS + Y P + + E + + Sbjct: 1 MKQNKRKRINAMIIAAALSLPFAV-------YSTPALAAVAIEANKTGQGLEDGTYEAVI 53 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A ++++ V +K+P L G + L S+S L Sbjct: 54 KAYKDKTNEESMAA---VYIKDPKLTIE---NGKKIVTATL--------SDSDFFQYLKT 99 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLIS----GKILTPTTPIKLVFKNANNILFE 169 + V + + + + + + + + N + FE Sbjct: 100 EDIHTPGVFHDVKVISEDKKKNGTKVIEFEVGELGKRYNMRMHIYIPTMTYDNKYQVQFE 159 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 E+ + + + +DQ + + + +E + + L Sbjct: 160 VNTLNLENNVPEKQKENKEDKVDQQDGIGNVIVDKQLQRHINKYNLNRENLDTPITKEDL 219 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 ++ K + ++ + + +++ + + +F + Sbjct: 220 LKVKSLIVVEAKNKGIQDVSGLEYMTN---LENLTLEEVKLKNIKFISELRQLKSLSITY 276 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 I P + FL + + + I ++ ++ + L Sbjct: 277 -GELEDIGPLAELEHIEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKDIKPLFTVKSL 335 >gi|196046610|ref|ZP_03113834.1| putative lacX protein [Bacillus cereus 03BB108] gi|225863553|ref|YP_002748931.1| putative lacX protein [Bacillus cereus 03BB102] gi|229183885|ref|ZP_04311101.1| hypothetical protein bcere0004_14520 [Bacillus cereus BGSC 6E1] gi|196022543|gb|EDX61226.1| putative lacX protein [Bacillus cereus 03BB108] gi|225786578|gb|ACO26795.1| putative lacX protein [Bacillus cereus 03BB102] gi|228599537|gb|EEK57141.1| hypothetical protein bcere0004_14520 [Bacillus cereus BGSC 6E1] Length = 290 Score = 38.4 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I SI+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVSISDKGAELQSIRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + + Sbjct: 64 DGKPYSLTQHGFARDLTFTVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLEDESFTDY 159 >gi|293401290|ref|ZP_06645434.1| HepA/SNF2 family protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305416|gb|EFE46661.1| HepA/SNF2 family protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 1075 Score = 38.4 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 35/384 (9%), Positives = 108/384 (28%), Gaps = 11/384 (2%) Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDL--NLRGYHLDVSS----NSPIVTLLSPSNT 116 ++++S V +++ L + ++L L+ Y L+ N V + + Sbjct: 482 DSVNISMGVRIESDLLEIDFDTFDFPVEELQEVLKAYRLNKKYYRMRNGSFVNIEDSALQ 541 Query: 117 KNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDE 176 + ++ + +VS + + + V ++A R+I + Sbjct: 542 ELSFILDGMHVSEKELESGKIKVPKYRSLYIDKSLKDAEMIKVERDATFKDIIRSIRNVK 601 Query: 177 HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSD 236 FK+ ++ N + + R + L ++K D Sbjct: 602 DSDFKVPHSLKNILRNYQKDGFRWLKTMANYGFGGILADDMGIGKTLQVITLLEDEKLHD 661 Query: 237 IEKSS--ISNFHESNSWLGISDKY--WASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 + S + +W K+ + + + Y + + + Sbjct: 662 PQAISLVVCPSSLILNWQSEIAKFSDALTSILITGNMEERKALIYKAKDYDVVITSYDYL 721 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSY 352 + I ++ T + A+ H+ + +++ + + + + + Sbjct: 722 KRDIEHYENFHFTYQIIDEAQYIKN-HNTKNAVSVKQIQAAHRFALTGTPIENSLAELWS 780 Query: 353 FYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQ 412 ++ + + + + ++P I +K Sbjct: 781 IFDFLMPGYLYTYPYFKKQYEIPIVKENDPITLKELKRMVEPFILRRVKKDVLKELPEKV 840 Query: 413 KAMIQLYKTHNINPLAGCWPILLQ 436 + + + L L++ Sbjct: 841 EHTMMIELDEETRKLYMANVSLIR 864 >gi|228984777|ref|ZP_04144949.1| hypothetical protein bthur0001_14780 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774975|gb|EEM23369.1| hypothetical protein bthur0001_14780 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 290 Score = 38.4 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I +I+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVTISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + + Sbjct: 64 DGKPYSLTQHGFARDLTFSVKEKSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159 >gi|329731533|gb|EGG67896.1| beta-channel forming cytolysin [Staphylococcus aureus subsp. aureus 21193] Length = 321 Score = 38.4 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 32/331 (9%), Positives = 84/331 (25%), Gaps = 24/331 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ +A +LS I+ + + ++ + V + Q D + Sbjct: 1 MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + ++ + K +L + D + + V L+ + ++ Sbjct: 61 STAPDDIGKNGKI-TKRTETVYDEKTNILQNLQF-DFIDDPTYD-KNVLLVKKQGSIHSN 117 Query: 121 FAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 + +N S + + +L + + T S Sbjct: 118 LKFESHKEEKNSNWLKYPSEYHVDFQVKRNPKTEILDQLPKNKISTAKVDSTFSYSSGGK 177 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNTFGVQEGFIAVLGDKSLVEQKYSDI 237 F + S + + + + N + V IA L Sbjct: 178 FDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIA----NDLKYGGEVKN 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + + + E SF S+++Y + + + +F Sbjct: 234 RNDELLFYRNTRI-----------ATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEK 282 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + + + + P Sbjct: 283 SNEKTQFEVTY---TRNQDILKNRPGIHYAP 310 >gi|219852861|ref|YP_002467293.1| hydrolase (metallo-beta-lactamase superfamily)-like protein [Methanosphaerula palustris E1-9c] gi|219547120|gb|ACL17570.1| hydrolase (metallo-beta-lactamase superfamily)-like protein [Methanosphaerula palustris E1-9c] Length = 342 Score = 38.4 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 28/101 (27%), Gaps = 16/101 (15%) Query: 1 MERNWNYFV----AIALSVIIVYAWQNFYVY-----------PRIEEMNNERKNIQTVKQ 45 M+ N + A+ L + + F+ E M N I T + Sbjct: 1 MDMKLNLLIVACFAVVL-FALFGGFSYFFPKVNPITIPPISVQPHEVMPNTSPRIVTQEV 59 Query: 46 PNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKG 86 P + + L + +++ I+ G Sbjct: 60 PTPEPAETTEIAPSVPEEGLLIVHFIDVGEGDAALIISPYG 100 >gi|15807391|ref|NP_296122.1| hypothetical protein DR_2401 [Deinococcus radiodurans R1] gi|6460226|gb|AAF11954.1|AE002071_8 hypothetical protein DR_2401 [Deinococcus radiodurans R1] Length = 131 Score = 38.4 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 23/68 (33%), Gaps = 4/68 (5%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 +A+AL + + W PR + + + + +S + + Sbjct: 10 LLIALALFWVGLLLW----TQPRSTQPRSTQSRSTQTRSTQTRSSSPRPTPPRQAPPSST 65 Query: 67 MSPRVELK 74 PR+ +K Sbjct: 66 PEPRIPVK 73 >gi|169604772|ref|XP_001795807.1| hypothetical protein SNOG_05401 [Phaeosphaeria nodorum SN15] gi|160706638|gb|EAT87792.2| hypothetical protein SNOG_05401 [Phaeosphaeria nodorum SN15] Length = 277 Score = 38.0 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 33/254 (12%), Positives = 74/254 (29%), Gaps = 63/254 (24%) Query: 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQ 393 I ++ A P+ ++ + A ++ + + ++ + ++ Sbjct: 5 IHTSVPWYAAIPLTAFITRAALVTTFGAWA---RSLMARYIGLQPLRQALAFQKRDEILK 61 Query: 394 PKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEM 453 ++ + + + + +L K N+ + QIP+FFA+ + I Sbjct: 62 TASFRTPKEASLAVKKEVNEVTAKLDKRWNVTLKGQLGWTIGQIPIFFAMAETIRQKCAA 121 Query: 454 RH-----------------------------------APFWGWIKDLAAADPTNIFTLFG 478 R W DL DPT Sbjct: 122 REGLMGLGFSAFRGEDAQAAVGEVAVNTSKWFEPSLATEGMLWFPDLLIPDPT------- 174 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADK------GQAMILNWMPVVFVFALS 532 G+ P ++S MF + ++ + L + ++ Sbjct: 175 ------------GVLPFVVSGLMFTNIYITKNTVENGASWPLAIRRTLLAVSLLVGPLCQ 222 Query: 533 SFPAGLIIYWSWSN 546 + PA L++YW+ S Sbjct: 223 NMPAALMLYWASST 236 >gi|70991176|ref|XP_750437.1| mitochondrial export translocase Oxa2 [Aspergillus fumigatus Af293] gi|66848069|gb|EAL88399.1| mitochondrial export translocase Oxa2, putative [Aspergillus fumigatus Af293] Length = 342 Score = 38.0 bits (86), Expect = 3.9, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 6/54 (11%) Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEI--GLIDRLRSTF----SKNYNSQ 581 P+ L+IYW S I+ +Q ++ + ++ ++ + K S+ Sbjct: 282 MPSALMIYWISSTNIATLQTFLLERFMLSKPLLEPWRQIHIGYPQKGEKTPPSK 335 >gi|229155265|ref|ZP_04283376.1| hypothetical protein bcere0010_14580 [Bacillus cereus ATCC 4342] gi|228628190|gb|EEK84906.1| hypothetical protein bcere0010_14580 [Bacillus cereus ATCC 4342] Length = 290 Score = 38.0 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I +I+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVTISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + + Sbjct: 64 DGKAYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159 >gi|302670485|ref|YP_003830445.1| polysaccharide ABC transporter ATP-binding/permease [Butyrivibrio proteoclasticus B316] gi|302394958|gb|ADL33863.1| polysaccharide ABC transporter ATP-binding/permease protein [Butyrivibrio proteoclasticus B316] Length = 663 Score = 38.0 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 33/150 (22%) Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 + L P L+ V+ A+Y+V E R WI+ + I + Sbjct: 379 WDKVRDYYLKTFLPKLVLWEVWVAVYQVFLYVWEGRPITAGVWIR-----EALLIKYIDM 433 Query: 479 ILPFYLPGFMHVGIW-PIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFAL------ 531 + F+ + I P I + ++ + VF+F Sbjct: 434 GNLWTARFFILLMILAPFIGGTLQMFSARAL---------RMMLIILWVFMFMFPGFDMY 484 Query: 532 -------SSFP--AG---LIIYWSWSNVIS 549 SFP +G + Y+ N+IS Sbjct: 485 GVANGGEGSFPFYSGTVCYVFYFCAGNMIS 514 >gi|47566074|ref|ZP_00237112.1| lacX protein [Bacillus cereus G9241] gi|47556991|gb|EAL15321.1| lacX protein [Bacillus cereus G9241] Length = 290 Score = 38.0 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 72 ELKNPSLIGSINLKGAQFDDLNLR----GYHLDVSSN-----SPIVTLLSPSNTKNAYFA 122 ++N +I +I+ KGA+ + L+ Y S +PI+ + N Y+ Sbjct: 4 TIQNEKVIVTISDKGAELQSVRLKEDNTEYLWQGDSTYWGRRAPILFPIVGRLVDNTYYV 63 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYLFK 181 + S + + S +T FE +S + + + Sbjct: 64 DGKAYSLTQHGFARDLTFSVKEQSETKITYIVTSNEETLKKYPYEFELLVSYELDGQIVH 123 Query: 182 IVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQ 217 + V N + ++ FS + P +F Sbjct: 124 VTYEVNNPTSKEMFFSIGAHPGFNFPLLDGESFTDY 159 >gi|241888770|ref|ZP_04776076.1| S-layer protein [Gemella haemolysans ATCC 10379] gi|241864446|gb|EER68822.1| S-layer protein [Gemella haemolysans ATCC 10379] Length = 373 Score = 38.0 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 15/168 (8%), Positives = 43/168 (25%), Gaps = 11/168 (6%) Query: 25 YVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINL 84 P E + + + + +VE+KN L+G+++ Sbjct: 124 VEKPLKESSEKPIEKLSVKPTEKPTEQPPGNPIEKSTTNTSETISKVEIKNDVLVGNLS- 182 Query: 85 KGAQFDDLNLRG--------YHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELP 136 + ++ + Y ++ N T+ + + N+ + Sbjct: 183 --GREIKVSFKKDSVSAEKLYVESLNDNELNQTIKYKLGSDYNIIETFEIHFEKNDKRVD 240 Query: 137 NSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 ++ ++ + N + + F I Sbjct: 241 SNVERTVTVAVVKKDNAELEVYHITDENTLEKVNSSYSTGELKFNINH 288 >gi|251778908|ref|ZP_04821828.1| TPR-repeat-containing protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083223|gb|EES49113.1| TPR-repeat-containing protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 423 Score = 38.0 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 28/243 (11%), Positives = 67/243 (27%), Gaps = 22/243 (9%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 +A+ L V I + F ++ N+ + ++ + + NS V+ +++ ++ S Sbjct: 181 IIALVLVVFICGTFYVFKEKFKVNLKENDNMSTESSNKAEENSNSSENVVNEEQKESESK 240 Query: 68 SPRVELK--NPSLIGSINLKG-----AQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 +P + N IN D++ + V S+ Sbjct: 241 TPDTTIDEQNKKAQLDINKLSEHFENGDIDNIY---------YDLQNVNEQDISDEYKGL 291 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLF 180 + + + IE+ + + + + I + Sbjct: 292 YRRCVNLLKTSGIEVFYGKGMEEFNIQNYEKANIEFSKAYDYSEGSYLKEHI----MFYK 347 Query: 181 KIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKS 240 + NN + I+ K A N + Y++ + Sbjct: 348 AVTLEQLNNFDEAIKLYELYYAEYPKGSYADNVL--YNLSLMFNNTDREKSIYYANKLRD 405 Query: 241 SIS 243 S Sbjct: 406 DFS 408 >gi|304436978|ref|ZP_07396941.1| RND family efflux transporter [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369929|gb|EFM23591.1| RND family efflux transporter [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 370 Score = 38.0 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 15/170 (8%), Positives = 47/170 (27%), Gaps = 17/170 (10%) Query: 5 WNYFVAI-ALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVK---QPNQVDNSYAAVLIDD 60 + I AL++ ++ +Y + + + + V+ + +D Sbjct: 3 KRTIIGIGALTMALIAGGSYWYYTQSAAQEAAKAVSTVDAARMNIKSTVEATGTIRPVDS 62 Query: 61 RAQALSMSPRVEL----KNPSLIGSINLKGAQFDDLNL--RGYHLDVSSNSPIVTLLSPS 114 + ++ R+ +N ++ Q L + Y VT Sbjct: 63 VEVSSKITARISSVLVKENDTVTA------GQIV-ATLDGKDYEAKRDQAQYRVTNTRAK 115 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNAN 164 + +Y + S ++ + + + + + + Sbjct: 116 YNRMSYLESIGAKSKSDLEDAEYNYDTAQSTLEEANSDANETIITAPISG 165 >gi|297816138|ref|XP_002875952.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297321790|gb|EFH52211.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 330 Score = 38.0 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 39/203 (19%) Query: 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQL 418 N+ +I+L T+ ++ + PL + + + E + + +L Sbjct: 135 NWWASIVLATLLIRGVTIPLMIDNERWRSRIMMLGIHSTASMETKDPAALAEHRIEFDKL 194 Query: 419 YKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFG 478 K + C+ I ++ + W DL D + IF Sbjct: 195 LKNN------SCFQI-----------SNMTEEVASFKTGGVLWFTDLTTHDTSLIF---- 233 Query: 479 ILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP---ADKGQAMILNWMPVVFVFALSSFP 535 P++ L+ +I ++ + M + Sbjct: 234 ---------------PLLTWLTFWIMIEYDATVGLEGAMIPKKLTRIMVIPMFVVAIMVS 278 Query: 536 AGLIIYWSWSNVISIVQQAVIMK 558 G+ Y + SI VI + Sbjct: 279 KGVHCYLMSCMMFSIAYMLVIRR 301 >gi|296534911|ref|ZP_06897225.1| hypothetical protein HMPREF0731_2707 [Roseomonas cervicalis ATCC 49957] gi|296264759|gb|EFH11070.1| hypothetical protein HMPREF0731_2707 [Roseomonas cervicalis ATCC 49957] Length = 52 Score = 38.0 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 8/50 (16%), Positives = 14/50 (28%) Query: 2 ERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDN 51 AIA+S+ I+ A+ + + Q P Sbjct: 1 MDQKRLLAAIAISIGILLAFDLWKRETTPPAPDAPAAVTQQAPTPTAPAA 50 >gi|228902904|ref|ZP_04067045.1| hypothetical protein bthur0014_40720 [Bacillus thuringiensis IBL 4222] gi|228856688|gb|EEN01207.1| hypothetical protein bthur0014_40720 [Bacillus thuringiensis IBL 4222] Length = 223 Score = 38.0 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 27/65 (41%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 N +AI L ++ + A+Q F + + + ++K Q + + S + + Sbjct: 26 NIAIAIVLLLVAIVAYQLFVPSTKEQASSTDKKVSQQTTKNEKAGKSEDKESAKKKEKEQ 85 Query: 66 SMSPR 70 + + + Sbjct: 86 AEAKQ 90 >gi|160890504|ref|ZP_02071507.1| hypothetical protein BACUNI_02946 [Bacteroides uniformis ATCC 8492] gi|156860236|gb|EDO53667.1| hypothetical protein BACUNI_02946 [Bacteroides uniformis ATCC 8492] Length = 1073 Score = 38.0 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 22/213 (10%), Positives = 47/213 (22%), Gaps = 10/213 (4%) Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A + V P + + + + + ++ P Sbjct: 750 KEATAQQPATSKEEGNLVAFSGPDFKATFDKQSGLLTSYLYKKHEYILNGQGPRP-FFWR 808 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + T N Y A L A + TT + T Sbjct: 809 APTDNDYGANLPVRLKAWKEASYQEPKAESFQVTPGSNATTVKVTYRFPQTEARWNITYK 868 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLV--- 230 + + K+ + G M+ T+ + ++ Sbjct: 869 IYASGVIKVDNRFMAEGDQAPMIPRVGLRMQLPESFTDLTYYGRGPKENYRDRRTSQFIG 928 Query: 231 ------EQKYSDIEKSSISNFHESNSWLGISDK 257 + Y + +N W ++DK Sbjct: 929 EYAIPVKDMYEPYVRPQENNHRTDIYWCALTDK 961 >gi|119719842|ref|YP_920337.1| hypothetical protein Tpen_0933 [Thermofilum pendens Hrk 5] gi|119524962|gb|ABL78334.1| hypothetical protein Tpen_0933 [Thermofilum pendens Hrk 5] Length = 544 Score = 38.0 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 38/372 (10%), Positives = 86/372 (23%), Gaps = 34/372 (9%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M + F+A + + A E K P ++ ++ D Sbjct: 1 MMNKKHLFLAAIAVLALFLA------TASAEPALRSWSGTPPPKAPGITVSAGEVIITDP 54 Query: 61 RAQALSMSP-----RVELKNPSLIGSINLKGAQFDDLNLR-GYHLDVSSNSPIVTLLSPS 114 + L + G L LR + + SP V ++ Sbjct: 55 PNDQYKYYRPDWNWPITSDLDVLEARLYSDG---QYLYLRFKFQTLKNKYSPYVMVVMDF 111 Query: 115 NTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISL 174 N ++ ++ +LP + L +F+ + + Sbjct: 112 TPDNPNDGFDYWLPDWSDTKLPWKW-----------DAIVGVNLGKYETQPFVFDHSWNP 160 Query: 175 DEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 ++ G + K + F G I G K + + Sbjct: 161 KPVGQLEVDQQNAVIEAKVPVSELPGFPLNGKVKVVILVFANDYGGIWDPGKKKAYDPEV 220 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 S G + Y S + + ++ + + Sbjct: 221 GVWIDDSFFYASNVYDIAGQTPTYAEVYGGWSNGVQEVAVYYTVTTSQGTFTSTTL---- 276 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFY 354 G+ ++ L +P + + + +G A + Sbjct: 277 ----GRKVSYARSLVPMKLIYPPLPGSLRAWSGKPLPPAPGYGVVDNEAVLTDPAGDQYK 332 Query: 355 NLVGNFGIAIML 366 ++ I Sbjct: 333 YYRPDWNWPITS 344 >gi|296330754|ref|ZP_06873230.1| bacteriophage SPP1 receptor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675773|ref|YP_003867445.1| bacteriophage SPP1 receptor [Bacillus subtilis subsp. spizizenii str. W23] gi|296152068|gb|EFG92941.1| bacteriophage SPP1 receptor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414017|gb|ADM39136.1| bacteriophage SPP1 receptor [Bacillus subtilis subsp. spizizenii str. W23] Length = 1077 Score = 38.0 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 21/180 (11%), Positives = 52/180 (28%), Gaps = 5/180 (2%) Query: 1 MERNWNYFV----AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M + A+ + +++ + F ++ N + I V + V + Sbjct: 1 MTEQRKSLIKLISAVIIILLLPVLFFRFIGDDPTKKAVNSTRQIAVVNEDTGVLSDEVKS 60 Query: 57 LIDDRAQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 +D++ L + P+ ++ + A L + Y V S + + Sbjct: 61 DEEDKSAQFGKEVATVLGERPNYSWTVVNRSAAETGLASKKYDAIVYIPSDFSKNILSYD 120 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + A L++ N + L + L + + + D Sbjct: 121 KDHPQKATLEFSIQDNLNAVNKEKVQRELEDAQKTMNKKMSALYWNFVSQKVDNIRGEFD 180 >gi|229125984|ref|ZP_04255008.1| hypothetical protein bcere0015_4470 [Bacillus cereus BDRD-Cer4] gi|228657467|gb|EEL13281.1| hypothetical protein bcere0015_4470 [Bacillus cereus BDRD-Cer4] Length = 1026 Score = 38.0 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 35/342 (10%), Positives = 93/342 (27%), Gaps = 37/342 (10%) Query: 1 MERNWN-----YFVAIALS--VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53 M++N +A ALS + Y P + + E + D Sbjct: 1 MKQNKRKRINAMIIAAALSLPFAV-------YSTPALAAVAIEVNKTGQGLEDGTYDAVI 53 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A ++++ V +K+P L G + L S+S L Sbjct: 54 KAYKDKTNEESMAA---VYIKDPKLTIE---NGKKIVTATL--------SDSDFFQYLKT 99 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + V + + + + + + + + ++ Sbjct: 100 EDIHTPGVFHDVKVISEDKKKNGTKVIQFEVGELGKRYNMRMHIYIPTMSYDNKYQVQFE 159 Query: 174 LDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQK 233 ++ + NN ++ + + + + + D Sbjct: 160 VN-------TLNLENNVPEKQKENKEEQQDENGNVILDKQLQKYINKYNLNRDNVDAPIT 212 Query: 234 YSDIEKSSISNFHESNSWLGISDKYWASVF--IPSKETSFHSQFKYLSDGHARYQAKFSA 291 D+ + + + I+ + + + ++++ +Y S Sbjct: 213 KKDLLQIKTLSIYSGKGINKITGLEYMTNLEKLTLRKSNVKDISAISKLRGLKYVDLTSN 272 Query: 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 + +I P + + N LF + + K I +++ Sbjct: 273 SIESIHPIEQLENINMLFLRDNKISDLTPLSKMKKIKTLDLI 314 >gi|189465247|ref|ZP_03014032.1| hypothetical protein BACINT_01592 [Bacteroides intestinalis DSM 17393] gi|189437521|gb|EDV06506.1| hypothetical protein BACINT_01592 [Bacteroides intestinalis DSM 17393] Length = 404 Score = 38.0 bits (86), Expect = 4.5, Method: Composition-based stats. Identities = 32/252 (12%), Positives = 68/252 (26%), Gaps = 15/252 (5%) Query: 9 VAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMS 68 + IA S ++ A FYV+ R +E N Q++K + V D L+ + Sbjct: 95 LIIAASFALLIASSIFYVWERNKENNELFMIAQSIKPDSVVS---------DVQLVLANN 145 Query: 69 PRVELKNPSLIGSINLKGAQ-FDDLNLRGYHLDVSSNSPIVTLLSPSNT---KNAYFAEL 124 + + N + + KG +D L+ + V LL N + L Sbjct: 146 EYISINNKKIDIQYDQKGNIHINDKKLKQENSATPQKEKDVALLHKINQLIVPKGRRSTL 205 Query: 125 DYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVD 184 + S V+ + + I K++ Sbjct: 206 TFSDGTVLWVNSGSRVVYPEQFEAKQREIYIDGEAYLQVSPDKSRPFIVKTNKIDIKVLG 265 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 T N + + ++ + ++ + + + + + Sbjct: 266 TTFNITAYEEDDRQAVALVEGSVEIISDK--KKLAALTPNDLFQYKNGQINIEQTDITQY 323 Query: 245 FHESNSWLGISD 256 W Sbjct: 324 ISWVEGWYIFES 335 >gi|324516773|gb|ADY46631.1| FMRFamide receptor [Ascaris suum] Length = 416 Score = 38.0 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 37/119 (31%), Gaps = 9/119 (7%) Query: 431 WPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD--PTNIFTLFGILPFYLPGFM 488 ++L + + + + ++E+ + ++L D P + F + Sbjct: 132 LLVVLICAILYNLVRFFEYTIEVTPEGDTVYARNLRDPDLYPYYMIGYFTASYLITHFLI 191 Query: 489 HVGIWPIIMS---LSMFIQMKMSPPPADKGQA----MILNWMPVVFVFALSSFPAGLII 540 GI ++ SM + + Q + M V ++ P L + Sbjct: 192 PFGIIIVMNGHVCCSMITLRRARLALTRQQQREYSTTFMLMMVTVMFALCNTLPFILNL 250 >gi|27468831|ref|NP_765468.1| putative aldose 1-epimerase [Staphylococcus epidermidis ATCC 12228] gi|57867822|ref|YP_189486.1| aldose 1-epimerase [Staphylococcus epidermidis RP62A] gi|251811959|ref|ZP_04826432.1| aldose 1-epimerase [Staphylococcus epidermidis BCM-HMP0060] gi|282875249|ref|ZP_06284122.1| aldose 1-epimerase [Staphylococcus epidermidis SK135] gi|293367047|ref|ZP_06613719.1| aldose 1-epimerase [Staphylococcus epidermidis M23864:W2(grey)] gi|27316379|gb|AAO05554.1|AE016750_159 putative aldose 1-epimerase [Staphylococcus epidermidis ATCC 12228] gi|57638480|gb|AAW55268.1| aldose 1-epimerase [Staphylococcus epidermidis RP62A] gi|251804558|gb|EES57215.1| aldose 1-epimerase [Staphylococcus epidermidis BCM-HMP0060] gi|281296014|gb|EFA88535.1| aldose 1-epimerase [Staphylococcus epidermidis SK135] gi|291318777|gb|EFE59151.1| aldose 1-epimerase [Staphylococcus epidermidis M23864:W2(grey)] gi|329733895|gb|EGG70219.1| aldose 1-epimerase [Staphylococcus epidermidis VCU028] gi|329735080|gb|EGG71376.1| aldose 1-epimerase [Staphylococcus epidermidis VCU045] Length = 336 Score = 38.0 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 28/292 (9%), Positives = 65/292 (22%), Gaps = 20/292 (6%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 +++ N GA+ YH + L + YF E Sbjct: 13 DLIKIDNDDTKIVFTNYGARIVSW---KYH------DNNIVLGNVVEADEFYFEEPFNFG 63 Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS----LDEHYLFKIVD 184 + + + + R I +D+ KI+ Sbjct: 64 ATIGRYAGRIENASFKLDDDTFQLESNDGQHHLHGGSHGLNRRIFDYEIVDDIGQVKIIF 123 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 T T + + H E + Y ++ + + Sbjct: 124 TTTIKEEEDNYPGDMMVKVIHTYDANHRWSVQYEAKSTKKTVFNPSNHVYFNLNRDNNVV 183 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 ++ + + + + L K +I +++ Sbjct: 184 YNHCINSSALK-------MYMLNNKHIVKEGQSLDLHRLLDTNKVYLKDIFESDNETLQQ 236 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 + G E + FE+ I +F+ + + Sbjct: 237 QINHYNGIDHPFEFGGNELTIDNSEFELNIKTDMPHFVMFTFNDPQVWNNDF 288 >gi|300697031|ref|YP_003747692.1| hypothetical protein RCFBP_mp10489 [Ralstonia solanacearum CFBP2957] gi|299073755|emb|CBJ53276.1| conserved exported protein of unknown function [Ralstonia solanacearum CFBP2957] Length = 796 Score = 38.0 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 54/209 (25%), Gaps = 9/209 (4%) Query: 96 GYHLDVSSNSPIVTL----LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILT 151 Y ++ V L ++ AY+ D + T I N+ VW Sbjct: 486 EYDQSGNAIQETVYLGDTPIATVKNGTAYYIYADQIDTPRVITDTNNLMVWRWDQTDPFG 545 Query: 152 PTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTAT 211 T P + + F + N +++ S GR ++ P Sbjct: 546 ATLPDE---NPTSLGAFTYNLRFPGQVYDAETGKHYN--VNRDYDSASGRYIQSDPIGLN 600 Query: 212 NTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSF 271 + + ++ N W S ++ IP F Sbjct: 601 GGQWSTYAYAGGNPVSLSDPSGLTVAISGHVAGGPIGNYWTTPSSYHFGIALIPDNPGDF 660 Query: 272 HSQFKYLSDGHARYQAKFSANEITILPGK 300 ++ + DG+ + G Sbjct: 661 PNRTGWAQDGNNIVATVGGQPSGSFGNGN 689 >gi|329726451|gb|EGG62914.1| aldose 1-epimerase [Staphylococcus epidermidis VCU144] Length = 336 Score = 38.0 bits (86), Expect = 4.9, Method: Composition-based stats. Identities = 28/292 (9%), Positives = 65/292 (22%), Gaps = 20/292 (6%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 +++ N GA+ YH + L + YF E Sbjct: 13 DLIKIDNDDTKIVFTNYGARIVSW---KYH------DNNIVLGNVVEADEFYFEEPFNFG 63 Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS----LDEHYLFKIVD 184 + + + + R I +D+ KI+ Sbjct: 64 ATIGRYAGRIENASFKLDDDTFQLESNDGQHHLHGGSHGLNRRIFDYEIVDDIGQVKIIF 123 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 T T + + H E + Y ++ + + Sbjct: 124 TTTIKEEEDNYPGDMMVKVIHTYDANHRWSVQYEAKSTKKTVFNPSNHVYFNLNRDNNVV 183 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 ++ + + + + L K +I +++ Sbjct: 184 YNHCINSSALK-------MYMLNNKHIVKEGQSLDLHRLLDTNKVYLKDIFESDNETLQQ 236 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 + G E + FE+ I +F+ + + Sbjct: 237 QINHYNGIDHPFEFGGNELTIDNSEFELNIKTDMPHFVMFTFNDPQVWNNDF 288 >gi|251788831|ref|YP_003003552.1| multidrug efflux system subunit MdtA [Dickeya zeae Ech1591] gi|247537452|gb|ACT06073.1| efflux transporter, RND family, MFP subunit [Dickeya zeae Ech1591] Length = 419 Score = 37.7 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 19/70 (27%), Gaps = 2/70 (2%) Query: 1 MERNW--NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLI 58 M + + I + ++AW+ F + + N+ + Sbjct: 1 MNAARLFRFLILIVIIAAALFAWRYFRPSQSESANEATTSQQASRQGQNRNGSGRRGSTA 60 Query: 59 DDRAQALSMS 68 QA S Sbjct: 61 PPPVQAAFSS 70 >gi|228987629|ref|ZP_04147743.1| hypothetical protein bthur0001_42990 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229157993|ref|ZP_04286064.1| hypothetical protein bcere0010_41720 [Bacillus cereus ATCC 4342] gi|228625446|gb|EEK82202.1| hypothetical protein bcere0010_41720 [Bacillus cereus ATCC 4342] gi|228772089|gb|EEM20541.1| hypothetical protein bthur0001_42990 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 217 Score = 37.7 bits (85), Expect = 5.1, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 25/47 (53%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS 52 N +AI L ++ + A+Q F + + ++++K Q + N+ + + Sbjct: 21 NIAIAIVLILVAIVAYQLFVPDTKEQASSSDKKVAQQTTKENKSEKA 67 >gi|314935902|ref|ZP_07843252.1| putative hydrolase [Staphylococcus hominis subsp. hominis C80] gi|313655908|gb|EFS19650.1| putative hydrolase [Staphylococcus hominis subsp. hominis C80] Length = 286 Score = 37.7 bits (85), Expect = 5.1, Method: Composition-based stats. Identities = 20/180 (11%), Positives = 51/180 (28%), Gaps = 10/180 (5%) Query: 77 SLIGSINLKG--AQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDY----VSTA 130 + G I+ G +D L + L + S IV L + ++ Y+ + +S Sbjct: 62 KVDGVISSNGTRGDIEDKLLFKHSLTIDSVKKIVQL---AQQQHIYYEVFPFEGDRISLI 118 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190 + ++ + N + I D + + + N Sbjct: 119 EDQSWMEDMIDSEHPQNEVSESEWKSRRDAMNGKINW-RKDIPNDAYSKIYLFNKKLNKI 177 Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250 + +++ + + ++ F + V + E K + + Sbjct: 178 KTFRDELIQNKVLLNISVSNSSRFNAETMAYQVDKGTGIKEMIDHFDIKQEETLVIGDSD 237 >gi|229163325|ref|ZP_04291277.1| hypothetical protein bcere0009_40910 [Bacillus cereus R309803] gi|228620106|gb|EEK76980.1| hypothetical protein bcere0009_40910 [Bacillus cereus R309803] Length = 217 Score = 37.7 bits (85), Expect = 5.1, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 25/65 (38%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 N +AI L ++ + A+Q F + + + E+K Q + + S + + Sbjct: 21 NIAIAIVLLLVAIVAYQLFVPNTKEQASSTEKKVSQQTTKNEKSGKSEDKEDKEATKKKE 80 Query: 66 SMSPR 70 + Sbjct: 81 QAEAK 85 >gi|229169121|ref|ZP_04296836.1| hypothetical protein bcere0007_40730 [Bacillus cereus AH621] gi|228614349|gb|EEK71459.1| hypothetical protein bcere0007_40730 [Bacillus cereus AH621] Length = 222 Score = 37.7 bits (85), Expect = 5.1, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 25/58 (43%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N +AI L + + A+Q F + + +N++K Q + N+ + + Q Sbjct: 21 NIAIAIVLVAVAIVAYQLFVPDTKEQASSNDKKVAQQTTKENKAEKAKGKEEPKKNEQ 78 >gi|326938269|gb|AEA14165.1| internalin protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 1012 Score = 37.7 bits (85), Expect = 5.2, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 98/341 (28%), Gaps = 35/341 (10%) Query: 1 MERNWN-----YFVAIALS--VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53 M++N +A ALS + Y P + + E + D Sbjct: 1 MKQNKRKRINAMIIAAALSLPFAV-------YSTPALAAVAIEANKTGQGLKDGTFDAVI 53 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A ++++ V +K+P L G + L S+S L Sbjct: 54 KAYKDKTNEESMAA---VYIKDPKLTIE---NGKKIVTATL--------SDSDFFQYLKT 99 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS 173 + V + + + + + + A + ++ Sbjct: 100 EDIHTPGVFHDVKVISEDKKKNGTKVIQFEVGELGKRYNMRMHIYIPTMAYDNKYQVQFE 159 Query: 174 LDE-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQ 232 ++ + + + N ++ + + + + ++ A + K L++ Sbjct: 160 VNTLNLENNVPEKQKENKEEKQDENGNVILDKQLQKYINKYNLDRDNVDAPITKKDLLKI 219 Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSAN 292 K I N ++ +K + +E++ +Y S + Sbjct: 220 KTLSIYSGKGINEITGLEYMTNLEK------LTLRESNVKDISAISKLRGLKYVDLTSNS 273 Query: 293 EITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEML 333 +I P + + N LF + + K I +++ Sbjct: 274 IESIHPIEQLENINMLFLRDNKISDLTPLSKMKKIKTLDLI 314 >gi|322373354|ref|ZP_08047890.1| serine/threonine protein kinase Stk1 [Streptococcus sp. C150] gi|321278396|gb|EFX55465.1| serine/threonine protein kinase Stk1 [Streptococcus sp. C150] Length = 621 Score = 37.7 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 21/185 (11%), Positives = 51/185 (27%), Gaps = 17/185 (9%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 F+ + II++A+ F + N + + T + + + + ++ Sbjct: 344 VFLGLVFIGIIIFAYLVFTNPDNAQVPNVVGQELSTAQTKLESAGFKVGDVKEVEDDSVD 403 Query: 67 MSPRVELKNPSLIGSINLKGAQFD--------DLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 +K G+ +G D L+ Y ++ + + Sbjct: 404 KGK--VIKTDPTAGTTRKEGTSIDVYVSSGDKGFTLKDYKGKNYKDA-------VKDLTS 454 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 Y D + N + S P K + +TI++ + Sbjct: 455 NYGVSEDQIDIQNVEDDSADEGEILSQSPGKNKTFNPKDSKAKIKFRVATPKTITMPDVT 514 Query: 179 LFKIV 183 + Sbjct: 515 GLTVS 519 >gi|218235426|ref|YP_002365348.1| internalin protein [Bacillus cereus B4264] gi|218163383|gb|ACK63375.1| internalin protein [Bacillus cereus B4264] Length = 994 Score = 37.7 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 35/360 (9%), Positives = 92/360 (25%), Gaps = 38/360 (10%) Query: 1 MERNWN-----YFVAIALS--VIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSY 53 M++N +A ALS + Y P + + E + D Sbjct: 1 MKQNKRKRINAMIIAAALSLPFAV-------YSTPALAAVAIEANKTGQGLEDGTYDAVI 53 Query: 54 AAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSP 113 A ++++ V +K+P L G + L S+S L Sbjct: 54 KAYKDKTNEESMAA---VYIKDPKLTIE---NGKKIVTATL--------SDSDFFQYLKT 99 Query: 114 SNTKNAYFAELDYVSTANNIELPNSNTVWNLIS----GKILTPTTPIKLVFKNANNILFE 169 + V + + + + + + + + N + FE Sbjct: 100 EDIHTPGVFHDVKVISEDKKKNGTKVIQFEVGELGKRYNMRMHIYIPTMAYDNKYQVQFE 159 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 + + N + + + + +E + + L Sbjct: 160 VNTLNLDKDVP--EAQKENKEDKVDQQDANVIVDKQLQRHINKYNLNRENLDTPITKEDL 217 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKF 289 ++ K + ++ + + +++ + + +F + Sbjct: 218 LKVKSLIVVEAKSKGIKDVSGLEYMTN---LENLTLEEVKLKNIKFISDLRQLKSLSITY 274 Query: 290 SANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFML 349 I P + FL + + + I ++ ++ + L Sbjct: 275 -GELEDIGPLAKLEHIEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKDIKPLFTVKSL 333 >gi|262371082|ref|ZP_06064404.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262313968|gb|EEY95013.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 232 Score = 37.7 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 4/110 (3%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 I +++I + WQ + E N K Q + + L + + Sbjct: 24 IISGILIALIAFFGWQYWQKKTLAENQMNTAKVQQLMDEARATQGDAFTALSATADKIVK 83 Query: 67 MSPRV--ELKNPSLIGSINLKGAQFDDLN--LRGYHLDVSSNSPIVTLLS 112 +P ++ L+ + A + L+ + +V ++ Sbjct: 84 EAPDSAQAIQTQLLMAKLAYDKADYASAEKALKKVENSKVDDDGLVQIVK 133 >gi|229917626|ref|YP_002886272.1| major facilitator transporter [Exiguobacterium sp. AT1b] gi|229469055|gb|ACQ70827.1| major facilitator transporter [Exiguobacterium sp. AT1b] Length = 375 Score = 37.7 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 24/215 (11%), Positives = 65/215 (30%), Gaps = 17/215 (7%) Query: 339 FYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDE 398 + + + + I ++ V + L F A Q + + + K Sbjct: 25 TWIASAGFEHVDMALFGYYIAAVICMIGMVVRLTLFFARPATSQVLKRSLKQMKAEKKRA 84 Query: 399 LREK----FKQSPPQVLQKAMIQLYKTHNINPLAGCWPIL-LQIPVFFAIYKVISISLEM 453 + Q T ++ GC + + F + I +E Sbjct: 85 GKAVATTTVNNIVLQKFIWERGWYRWTQHMLIAWGCLGSFAITFGLTFQWMRFDLIDIET 144 Query: 454 RHAPFWGWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPAD 513 + PT G+ + +++ +++ + M + +++ Sbjct: 145 YQIVVFNI--------PTIKMAAHGLFAELVYNGLNITALMLLVGVLMALYRRINDQDVK 196 Query: 514 KGQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVI 548 Q + +P++ + + +GL++ + S V Sbjct: 197 VTQRFEFDILPLLMLLI-VTV-SGLLL--TVSYVF 227 >gi|75761027|ref|ZP_00741029.1| hypothetical protein RBTH_04596 [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74491483|gb|EAO54697.1| hypothetical protein RBTH_04596 [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 240 Score = 37.7 bits (85), Expect = 5.7, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 27/65 (41%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQAL 65 N +AI L ++ + A+Q F + + + ++K Q + + S + + Sbjct: 43 NIAIAIVLLLVAIVAYQLFVPSTKEQASSTDKKVSQQTTKNEKAGKSEDKESAKKKEKEQ 102 Query: 66 SMSPR 70 + + + Sbjct: 103 AEAKQ 107 >gi|47566564|ref|ZP_00237386.1| conserved hypothetical protein protein [Bacillus cereus G9241] gi|47556594|gb|EAL14926.1| conserved hypothetical protein protein [Bacillus cereus G9241] Length = 217 Score = 37.7 bits (85), Expect = 5.7, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 25/47 (53%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS 52 N +AI L ++ + A+Q F + + ++++K Q + N+ + + Sbjct: 21 NIAIAIVLILVAIVAYQLFVPDTKEQASSSDKKVAQQTTKENKSEKA 67 >gi|82753931|ref|XP_727875.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23483939|gb|EAA19440.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 1704 Score = 37.7 bits (85), Expect = 5.7, Method: Composition-based stats. Identities = 37/358 (10%), Positives = 97/358 (27%), Gaps = 11/358 (3%) Query: 94 LRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPT 153 L+ Y ++ N +L+P K + + NI + + + Sbjct: 930 LKSYPINYDENKGCFYMLNPEKNKMYKNYKYNIDRNNMNIIKLTNEVTEHFKNSFFFLDK 989 Query: 154 TPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRH-KPQTATN 212 I + I +++ + + N+ +++ + +P ++ Sbjct: 990 IFIPKDAFFFVKDSEDVGIRNNKNKPVYVHHALVNDLKEEMTEQTVFDSLYSCEPPYKSD 1049 Query: 213 TFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFH 272 + + + E + E S+ +F E+ + K ++ SK F Sbjct: 1050 YYRYIQKKRIQNKIRKFKEYILNYYEFDSVEDFFETLLVFDVEHKKLITMLNSSKGDDFM 1109 Query: 273 SQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEM 332 + +A + N L T + E Sbjct: 1110 DPLNNNYNKYANLCFNITKNIYEQ---------YRLLVDPNYDNTFKKENEINNFEIKEN 1160 Query: 333 LIDWGWFYF-IAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKN 391 + +F A+ + + M + + I + + + N+ Sbjct: 1161 GYNVEYFNLDSAETVKVKMENKRKNIKSNWSTIESQIGTIDSCNSDEHIAKTNTYINIDK 1220 Query: 392 IQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISI 449 + I+E+ +++ + ++ L P F +I + Sbjct: 1221 MDETIEEMSNMYEEFFNLGNTRKKVKEINIDTFKMFVENLGKLKGFPNFASINECFLG 1278 >gi|324511536|gb|ADY44798.1| Inner membrane protein COX18 [Ascaris suum] Length = 308 Score = 37.7 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 53/163 (32%), Gaps = 23/163 (14%) Query: 401 EKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW- 459 EK + +++++ + + H + + IPV+ + + P Sbjct: 128 EKILRKSNEMVEEYTAKYLREHRLQASRIQNLKMCTIPVWIFSSFAVRNIITSDFHPNIE 187 Query: 460 --GWIKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQA 517 W +L DP I + + + + ++PI M+ F + Sbjct: 188 GVLWFPNLLQPDPYFILPIAVGIFGFFNLWSQRRVYPIEMN--TFHRSYD---------- 235 Query: 518 MILNWMPVVFVFALSS----FPAGLIIYWSWSNVISIVQQAVI 556 + F + PA + +YW + I+Q ++ Sbjct: 236 ----VLLAFFTLFAVNIMTDMPACIPLYWLMVSASGILQSLML 274 >gi|312863226|ref|ZP_07723464.1| putative serine/threonine-protein kinase PrkC [Streptococcus vestibularis F0396] gi|322516393|ref|ZP_08069318.1| non-specific serine/threonine protein kinase [Streptococcus vestibularis ATCC 49124] gi|311100762|gb|EFQ58967.1| putative serine/threonine-protein kinase PrkC [Streptococcus vestibularis F0396] gi|322125126|gb|EFX96519.1| non-specific serine/threonine protein kinase [Streptococcus vestibularis ATCC 49124] Length = 622 Score = 37.7 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 20/185 (10%), Positives = 53/185 (28%), Gaps = 17/185 (9%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 F+ + II++A+ F ++ N + + T + + + + ++ Sbjct: 344 VFLGLVFIGIIIFAYLVFTNPDNVQVPNVVGQELSTAQTKLESAGFKVGDVNEVENDSVD 403 Query: 67 MSPRVELKNPSLIGSINLKGAQFD--------DLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 +K G+ +G D L+ Y ++ + + Sbjct: 404 KGK--VIKTDPTAGTTRKEGTSIDVYVSSGSKGFTLKNYKGKNYKDA-------IEDLTS 454 Query: 119 AYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 Y D + + + S + P K + +TI++ + Sbjct: 455 NYGVSEDQIDIQHVEDDDAKEGEILSQSPEKNKSFNPKDSKAKIKFRVATPKTITMPDVT 514 Query: 179 LFKIV 183 + Sbjct: 515 GLTVS 519 >gi|119496407|ref|XP_001264977.1| mitochondrial export translocase Oxa2, putative [Neosartorya fischeri NRRL 181] gi|119413139|gb|EAW23080.1| mitochondrial export translocase Oxa2, putative [Neosartorya fischeri NRRL 181] Length = 279 Score = 37.7 bits (85), Expect = 6.2, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 17/31 (54%) Query: 534 FPAGLIIYWSWSNVISIVQQAVIMKMHGAEI 564 P+ L+IYW S I+ +Q ++ + ++ Sbjct: 225 MPSALMIYWISSTNIATLQTFLLERYMLSKP 255 >gi|332678398|gb|AEE87527.1| Protein-export membrane protein SecD [Francisella cf. novicida Fx1] Length = 645 Score = 37.7 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 42/435 (9%), Positives = 112/435 (25%), Gaps = 29/435 (6%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 N + I L++ I YA N + +++ + ++ T + + + +A Sbjct: 16 KNLLIVIVLALAIFYALPNVFGKSPALQISQKDGDVTTQLLVSVENTLAKDKISYQKADI 75 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE 123 + + + L+ + S + + ++ + + + Sbjct: 76 ADDKSNIAITFKD------------VEEQLKAKKVLKDSLSDDYIIAMNMLSNSPNWLSA 123 Query: 124 LDYVSTANNIELPNSNTVW-----NLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 L ++L + L + I L N+I + +E Sbjct: 124 LGANPMNLGLDLRGGMYLMLEADTKTSIDAQLDNSLSIILSAAKDNSINISSSTKAEEKS 183 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 K N I + + + K +T+ Q+ I + V Y+ + Sbjct: 184 TIKAPQNYLENGFVSITLANSADVDKLKQYLSTDFIKTQDPNIIYTNKGNTVFISYNSAK 243 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + S + ++ I + + S + + Sbjct: 244 ILQLKQDAISQVVTVMRNR------INALGVAEASVAQAGDNRVVIEIPGLQDATQAKQI 297 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYN 355 +T +F + E+ + + + +Y A + Sbjct: 298 LGGTSTASFYLVNP-VADRLAAEEQGYKVYSLDNGRGYQSYYSLKGTAVAGGADIIGASP 356 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKA 414 + ++ + + + N + + K K + + Sbjct: 357 SIDRQTGTPIVMVELDRSAASHFRQITGKNIGNPMGVMLVNTTYEKVKDKDGKEKNVVSK 416 Query: 415 MIQLYKTHNINPLAG 429 +L I G Sbjct: 417 TEKLINVATIQSALG 431 >gi|332671327|ref|YP_004454335.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas fimi ATCC 484] gi|332340365|gb|AEE46948.1| membrane protein insertase, YidC/Oxa1 family [Cellulomonas fimi ATCC 484] Length = 268 Score = 37.7 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 29/69 (42%) Query: 382 QYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFF 441 + ++ + PQ LQ+A +QLY PLAGC P+L Q PV Sbjct: 57 SQAKAEATRARLAPRIAALQRRHRHDPQELQRATMQLYADEGTTPLAGCLPMLAQAPVVG 116 Query: 442 AIYKVISIS 450 IY V + Sbjct: 117 LIYAVFVHT 125 >gi|118497685|ref|YP_898735.1| preprotein translocase subunit SecD [Francisella tularensis subsp. novicida U112] gi|194323657|ref|ZP_03057433.1| protein-export membrane protein SecD [Francisella tularensis subsp. novicida FTE] gi|118423591|gb|ABK89981.1| preprotein translocase, subunit D, membrane protein [Francisella novicida U112] gi|194322021|gb|EDX19503.1| protein-export membrane protein SecD [Francisella tularensis subsp. novicida FTE] Length = 645 Score = 37.7 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 42/435 (9%), Positives = 112/435 (25%), Gaps = 29/435 (6%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 N + I L++ I YA N + +++ + ++ T + + + +A Sbjct: 16 KNLLIVIVLALAIFYALPNVFGKSPALQISQKDGDVTTQLLVSVENTLAKDKISYQKADI 75 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE 123 + + + L+ + S + + ++ + + + Sbjct: 76 ADDKSNIAITFKD------------VEEQLKAKKVLKDSLSDDYIIAMNMLSNSPNWLSA 123 Query: 124 LDYVSTANNIELPNSNTVW-----NLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 L ++L + L + I L N+I + +E Sbjct: 124 LGANPMNLGLDLRGGMYLMLEADTKTSIDAQLDNSLSIILSAAKDNSINISSSTKAEEKS 183 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 K N I + + + K +T+ Q+ I + V Y+ + Sbjct: 184 TIKAPQNYLENGFVSITLANSADVDKLKQYLSTDFIKTQDPNIIYTNKGNTVFISYNSAK 243 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + S + ++ I + + S + + Sbjct: 244 ILQLKQDAISQVVTVMRNR------INALGVAEASVAQAGDNRVVIEIPGLQDATQAKQI 297 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYN 355 +T +F + E+ + + + +Y A + Sbjct: 298 LGGTSTASFYLVNP-VADRLAAEEQGYKVYSLDNGRGYQSYYSLKGTAVAGGADIIGASP 356 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKA 414 + ++ + + + N + + K K + + Sbjct: 357 SIDRQTGTPIVMVELDRSAASHFRQITGKNIGNPMGVMLVNTTYEKVKDKDGKEKNVVSK 416 Query: 415 MIQLYKTHNINPLAG 429 +L I G Sbjct: 417 TEKLINVATIQSALG 431 >gi|229175051|ref|ZP_04302569.1| hypothetical protein bcere0006_41330 [Bacillus cereus MM3] gi|228608419|gb|EEK65723.1| hypothetical protein bcere0006_41330 [Bacillus cereus MM3] Length = 215 Score = 37.3 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 26/58 (44%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N +AI L ++ + ++Q F + E ++++K Q + N+ + + Q Sbjct: 21 NIAIAIVLILVAIVSYQLFVPERKEEASSSDKKVAQQTTKENKSEKAKGKEETKKNEQ 78 >gi|16080237|ref|NP_391064.1| bacteriophage SPP1 receptor [Bacillus subtilis subsp. subtilis str. 168] gi|221311129|ref|ZP_03592976.1| hypothetical protein Bsubs1_17301 [Bacillus subtilis subsp. subtilis str. 168] gi|221315456|ref|ZP_03597261.1| hypothetical protein BsubsN3_17217 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320372|ref|ZP_03601666.1| hypothetical protein BsubsJ_17185 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324656|ref|ZP_03605950.1| hypothetical protein BsubsS_17336 [Bacillus subtilis subsp. subtilis str. SMY] gi|59802580|sp|O32101|YUEB_BACSU RecName: Full=Bacteriophage SPP1 adsorption protein yueB; AltName: Full=Bacteriophage SPP1 receptor protein yueB gi|2635681|emb|CAB15174.1| bacteriophage SPP1 receptor [Bacillus subtilis subsp. subtilis str. 168] Length = 1076 Score = 37.3 bits (84), Expect = 6.7, Method: Composition-based stats. Identities = 34/351 (9%), Positives = 88/351 (25%), Gaps = 8/351 (2%) Query: 1 MERNWNYFV----AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M + A+ + +++ + F ++ N + I V + V + Sbjct: 1 MTEQRKSLIKLISAVIIILLLPVLFFRFIGDDPTKKAVNSTRQIAVVNEDTGVLSDEVKS 60 Query: 57 LIDDRAQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 +D++ L + P ++ + A L + Y V S + + Sbjct: 61 DEEDKSAQFGKEVAAVLGERPDYSWTVVNRSAAETGLASKKYDAIVYIPSDFSKNILSYD 120 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + A L++ N + L + L + + + D Sbjct: 121 KDHPQKATLEFSIQDNLNAVNKEKVQRELEDAQKTMNKKMSALYWNFVSQKVDNIRGEFD 180 Query: 176 E-HYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKY 234 + V N G I + K + + + Sbjct: 181 KIVNKESEFQNVMYNFYKPSSNDLAGEIKQQK--DLIDELKKSMNEAQGTTKEKASTAEE 238 Query: 235 SDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEI 294 + + E + K S + + + Q + + Sbjct: 239 AKNTLKEFIDTVERYKEYQENQKKLLLAAQDSTQQQIRTGLDAIQAQQKANQFSERMSGL 298 Query: 295 TILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKP 345 G++ T + + L + + + + F+++ Sbjct: 299 ATGIGQAKTQIGLTNLALNNAEKLRQNQVPLQEMGMKKIENDMFNAFLSRY 349 >gi|229013595|ref|ZP_04170726.1| hypothetical protein bmyco0001_40030 [Bacillus mycoides DSM 2048] gi|228747654|gb|EEL97526.1| hypothetical protein bmyco0001_40030 [Bacillus mycoides DSM 2048] Length = 216 Score = 37.3 bits (84), Expect = 6.8, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 25/58 (43%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N +AI L + + A+Q F + + +N++K Q + N+ + + Q Sbjct: 21 NIAIAIVLVAVAIVAYQLFVPDTKEQASSNDKKVAQQTTKENKAEKAKGKEEPKKNEQ 78 >gi|229062073|ref|ZP_04199398.1| hypothetical protein bcere0026_41450 [Bacillus cereus AH603] gi|228717225|gb|EEL68900.1| hypothetical protein bcere0026_41450 [Bacillus cereus AH603] Length = 215 Score = 37.3 bits (84), Expect = 6.8, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 25/58 (43%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N +AI L + + A+Q F + + +N++K Q + N+ + + Q Sbjct: 21 NIAIAIVLVAVAIVAYQLFVPDTKEQASSNDKKVAQQTTKENKAEKAKGKEEPKKNEQ 78 >gi|15924995|ref|NP_372529.1| hypothetical protein SAV2005 [Staphylococcus aureus subsp. aureus Mu50] gi|255006793|ref|ZP_05145394.2| hypothetical protein SauraM_10005 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|81774844|sp|Q931I5|LUKL2_STAAM RecName: Full=Uncharacterized leukocidin-like protein 2; Flags: Precursor gi|14247778|dbj|BAB58167.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] Length = 351 Score = 37.3 bits (84), Expect = 6.8, Method: Composition-based stats. Identities = 31/321 (9%), Positives = 79/321 (24%), Gaps = 8/321 (2%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ +A +LS I+ + + ++ + V + Q D + Sbjct: 1 MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + ++ + K +L + D + + V L+ + ++ Sbjct: 61 STVPDDIGKNGKI-TKRTETVYDEKTNILQNLQF-DFIDDPTYD-KNVLLVKKQGSIHSN 117 Query: 121 FAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 + +N S + + +L + + T S Sbjct: 118 LKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGK 177 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNTFGVQEGFIAVL--GDKSLVEQKYS 235 F + S + + + + N + V IA + + Sbjct: 178 FDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLKYGGEVKNRNDE 237 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 + + N L + KY + S + + + Q + + Sbjct: 238 LLFYRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQ 297 Query: 296 ILPGKSITTTNFLFAGAKEFP 316 + K Sbjct: 298 DILKNRPGIHYAPSILEKNKD 318 >gi|119569915|gb|EAW49530.1| zinc finger, DHHC-type containing 6, isoform CRA_d [Homo sapiens] Length = 317 Score = 37.3 bits (84), Expect = 7.0, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 13/182 (7%) Query: 338 WFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID 397 + ML+++ ++ N+ A+ + FV L + P + + K Q Sbjct: 50 HTTGGSVNFIMLINWTVMILYNYFNAMFVGPGFVPLGWKPEISQDTMYLQYCKVCQAYKA 109 Query: 398 ELREKFKQSPPQVLQKA-----MIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLE 452 ++ V++ + N + + A V+++ + Sbjct: 110 PRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFVMTMYTQ 169 Query: 453 MRHAPFWGWIK---DLAAA--DPTNIFTLFGILPFYLPGFMHVGIW--PIIMSLSMFIQM 505 + H +GW D++AA DP I FG+ F F I + + FIQM Sbjct: 170 LYHRLSFGWNTVKIDMSAARRDPLPIVP-FGLAAFATTLFALGLALGTTIAVGMLFFIQM 228 Query: 506 KM 507 K+ Sbjct: 229 KI 230 >gi|229135200|ref|ZP_04263999.1| hypothetical protein bcere0014_41020 [Bacillus cereus BDRD-ST196] gi|228648242|gb|EEL04278.1| hypothetical protein bcere0014_41020 [Bacillus cereus BDRD-ST196] Length = 216 Score = 37.3 bits (84), Expect = 7.0, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 25/58 (43%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N +AI L + + A+Q F + + +N++K Q + N+ + + Q Sbjct: 21 NIAIAIVLVAVAIVAYQLFVPDTKEQASSNDKKVAQQTTKENKAEKAKGKEETKKNEQ 78 >gi|298695281|gb|ADI98503.1| probable leukocidin S subunit [Staphylococcus aureus subsp. aureus ED133] gi|323439888|gb|EGA97604.1| leukocidin S subunit [Staphylococcus aureus O11] gi|323443051|gb|EGB00672.1| leukocidin S subunit [Staphylococcus aureus O46] Length = 351 Score = 37.3 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 32/331 (9%), Positives = 84/331 (25%), Gaps = 24/331 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ +A +LS I+ + + ++ + V + Q D + Sbjct: 1 MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + ++ + K +L + D + + V L+ + ++ Sbjct: 61 STVPDDIGKNGKI-TKRTETVYDEKTNILQNLQF-DFIDDPTYD-KNVLLVKKQGSIHSN 117 Query: 121 FAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 + +N S + + +L + + T S Sbjct: 118 LKFESHKEEKNSNWLKYPSEYHVDFQVKRNPKTEILDQLPKNKISTAKVDSTFSYSSGGK 177 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNTFGVQEGFIAVLGDKSLVEQKYSDI 237 F + S + + + + N + V IA L Sbjct: 178 FDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIA----NDLKYGGEVKN 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + + + E SF S+++Y + + + +F Sbjct: 234 RNDELLFYRNTRI-----------ATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEK 282 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + + + + P Sbjct: 283 SNEKTQFEVTY---TRNQDILKNRPGIHYAP 310 >gi|283782546|ref|YP_003373300.1| sortase family protein [Gardnerella vaginalis 409-05] gi|298253015|ref|ZP_06976807.1| sortase (surface protein transpeptidase) [Gardnerella vaginalis 5-1] gi|283441702|gb|ADB14168.1| sortase family protein [Gardnerella vaginalis 409-05] gi|297532410|gb|EFH71296.1| sortase (surface protein transpeptidase) [Gardnerella vaginalis 5-1] Length = 368 Score = 37.3 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 25/63 (39%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 +A A+ + AWQ ++ + E E + + + P D + A+ + ALS Sbjct: 29 LLIAFAVICALYIAWQMWWTGEQAEHTQVEARQAISWQNPKTGDKTKIALPQNTDPPALS 88 Query: 67 MSP 69 Sbjct: 89 KPK 91 >gi|39104512|dbj|BAC65789.3| mKIAA1423 protein [Mus musculus] Length = 438 Score = 37.3 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 65/233 (27%), Gaps = 10/233 (4%) Query: 233 KYSDIEKSSISNFHESNSWLGISDKYWASVFI---PSKETSFHSQFKYLSDGHARYQAKF 289 YS + SN + + W + + PS+ETS + F Q Sbjct: 87 NYSLNSSKKLKTVIPSNPLSTYNQQLWLTCVVELEPSEETSIQTSFTMTVKVDGVSQDGT 146 Query: 290 SANEITILPGKSITTTNF---LFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPM 346 + + ++ T T +++ + + + + F K Sbjct: 147 TTYIHNKVHNRTRTLTCAGKCAEIIVAHLGYLNYTQYRVTVEFEHLNQPIKDMNFTWKTY 206 Query: 347 FMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQS 406 S + + + L L K + + L + + Sbjct: 207 NPAFSRLEIWFRFVFVVLTFIVIC--LFVHSLRKFSMRDWGIEQKWMSVLLALLLLYNDN 264 Query: 407 PPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFW 459 T N + + ++ + + + ++ ++ E+RH P+ Sbjct: 265 EL--NDPMYQYRVDTGNFQGMKVFFMVVAAVYILYLLFLIVRACSELRHMPYV 315 >gi|310780648|ref|YP_003968979.1| conjugation TrbI family protein [Ilyobacter polytropus DSM 2926] gi|309749971|gb|ADO84631.1| conjugation TrbI family protein [Ilyobacter polytropus DSM 2926] Length = 364 Score = 37.3 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 28/274 (10%), Positives = 78/274 (28%), Gaps = 19/274 (6%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 + +A L + I+ +F + + K + N+ + + + Sbjct: 21 NKRSLIIAFVLILGIIILTSSF------KNKGSSEKKESINLEEKMTVNNVSDLPNSYQE 74 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRG----YHL-DVSSNSPIVTLLSPSNTK 117 + N +I+ K D+ + Y +++ S I ++ N + Sbjct: 75 MRIKEEIETTFDNSKYTKNISYKNQMLDEEKHKKLDKLYQEAELAKRSGIGFGVNKRNNE 134 Query: 118 NAYFAELDYVSTANNIELPNSNTVW--------NLISGKILTPTTPIKLVFKNANNILFE 169 N + Y+S N+ S + N + I P +P ++ + Sbjct: 135 NTSIDQTTYISREQNLNDQGSKDSFLKNKESSPNYLGNYIEDPISPYEVKAGTIIPGIMI 194 Query: 170 RTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSL 229 I+ D + + + + ++ Q+ + V Sbjct: 195 TGINSDLPGSIVGQVRESVFDTVSGNYLLIPQGTKIFGTYDSSITWGQDRVLIVWQRLIF 254 Query: 230 VEQKYSDIEKSSISNFHESNSWLGISDKYWASVF 263 K ++ + + + ++ ++ Sbjct: 255 PNGKSINLSNMPGVDLTGQAGFSDKVNNHFGTLL 288 >gi|332827261|gb|EGK00031.1| hypothetical protein HMPREF9455_03620 [Dysgonomonas gadei ATCC BAA-286] Length = 442 Score = 37.3 bits (84), Expect = 7.4, Method: Composition-based stats. Identities = 31/275 (11%), Positives = 81/275 (29%), Gaps = 5/275 (1%) Query: 268 ETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAI 327 + + + D + A +E P + N + A I + + + Sbjct: 88 KEKGTALLQINGDLNQNPNAVTFFSEKQQPPRELTAYINDVLTEAVRNKKIDDFTSESNL 147 Query: 328 PRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTA 387 + K + + + + T + L F + Sbjct: 148 EPQVVTNLQEILKSKDKIHISTIRWDETGKETETLGEIATVAGMALTFCMFFFIMMYGSM 207 Query: 388 NMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI 447 M+++ + + S + M ++ + L +++ V AI + Sbjct: 208 VMQSVVEEKSNRIIEVIISSVKPFDLMMGKIIGVGLVGLLQLVVWLVIGGGVMIAIQMIF 267 Query: 448 SISLEMRHAPFWGWIKDL---AAADPTNIFTLFGILPFYLPGFMHVGIWP--IIMSLSMF 502 I+++M + L + + + F + + V + ++ S+F Sbjct: 268 GINMDMSASVDTQQAMALMKSSNVEMASFLNGFFSINWVQVAICLVLYFTGGYLLFASLF 327 Query: 503 IQMKMSPPPADKGQAMILNWMPVVFVFALSSFPAG 537 + + Q +I+ M ++ V + F A Sbjct: 328 AMFGSGANDSQEAQQLIMPVMIILMVAFYTGFAAA 362 >gi|242243858|ref|ZP_04798302.1| aldose 1-epimerase [Staphylococcus epidermidis W23144] gi|242232702|gb|EES35014.1| aldose 1-epimerase [Staphylococcus epidermidis W23144] Length = 336 Score = 37.3 bits (84), Expect = 7.4, Method: Composition-based stats. Identities = 29/292 (9%), Positives = 67/292 (22%), Gaps = 20/292 (6%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 +++ N GA+ YH + L + YF E Sbjct: 13 DLIKIDNDDTKIVFTNYGARIVSW---KYH------DNNIVLGNVVEADEFYFEEPFNFG 63 Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS----LDEHYLFKIVD 184 + + + + R I +D+ KI+ Sbjct: 64 ATVGRYAGRIENASFKLDDDTFQLESNDGQHHLHGGSHGLNRRIFDYEIVDDIGQVKIIF 123 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 T T + + H E + Y ++ + + Sbjct: 124 TTTIKEEEDNYPGNMMVKVIHTYDANHRWSVQYEAKSTKKTVFNPSNHVYFNLNRDNNVV 183 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 ++ + Y + + + L K +I +++ Sbjct: 184 YNHCIN-SSELKMYML------NDKHIVKEEQSLDLHRLLDTNKVYLKDIFESDNETLQQ 236 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 + G E + FE++I +F+ + + Sbjct: 237 QINHYNGIDHPFEFGGNELTIDNSEFELIIKTDMPHFVMFTFNDPQVWNNDF 288 >gi|85000749|ref|XP_955093.1| hypothetical protein [Theileria annulata strain Ankara] gi|65303239|emb|CAI75617.1| hypothetical protein, conserved [Theileria annulata] Length = 446 Score = 37.3 bits (84), Expect = 7.4, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 82/254 (32%), Gaps = 23/254 (9%) Query: 254 ISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTTNFLFAGAK 313 ++D++ S F P K + + E + G+S+ Sbjct: 116 VNDRFVNSNFSPDDLNEKVYNVKNKTGNELIEE----LEEDLKISGESLGFEELFEIPDY 171 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + R F + M ++ L ++ I L T+F KL Sbjct: 172 HQYLMTRIMDLNGNKR----SILQRFLPVEYVQQMFLTVHDCLNLSWSATIFLITLFFKL 227 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQK-------AMIQLYKTHNI-- 424 L P+ S I P++ +L+EK K + + + +L K ++ Sbjct: 228 LLLPVWSAAERSRRLNAVIVPEVVKLQEKAKLAFSTKNHELARETQLKIFELTKRNSFVK 287 Query: 425 NPLAGCWPILLQIPVFFAIYKVISI-SLEMRHAPFW-----GWIKDLAAADPTNIFTLFG 478 L ++Q +F +Y + + +++ P + W+ L+ DP I Sbjct: 288 GILVQIGATMVQGLMFGTVYGGLRLFAIDPNSRPDFTYEPCLWLDSLSLPDPYYILPTIF 347 Query: 479 ILPFYLPGFMHVGI 492 + ++ + Sbjct: 348 GILMTFVFEHNISL 361 >gi|15927581|ref|NP_375114.1| hypothetical protein SA1813 [Staphylococcus aureus subsp. aureus N315] gi|148268479|ref|YP_001247422.1| Combined leucocidin/ASH4 hemolysin [Staphylococcus aureus subsp. aureus JH9] gi|150394542|ref|YP_001317217.1| Combined leucocidin/ASH4 hemolysin [Staphylococcus aureus subsp. aureus JH1] gi|156980322|ref|YP_001442581.1| hypothetical protein SAHV_1991 [Staphylococcus aureus subsp. aureus Mu3] gi|257793275|ref|ZP_05642254.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|258413682|ref|ZP_05681956.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|258419788|ref|ZP_05682751.1| aerolysin/Leukocidin family protein [Staphylococcus aureus A9719] gi|258434309|ref|ZP_05688710.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A9299] gi|258444469|ref|ZP_05692802.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A8115] gi|258445361|ref|ZP_05693552.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A6300] gi|258447829|ref|ZP_05695964.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A6224] gi|258454463|ref|ZP_05702430.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A5937] gi|269203660|ref|YP_003282929.1| Aerolysin/leukocidin family protein [Staphylococcus aureus subsp. aureus ED98] gi|282894610|ref|ZP_06302838.1| conserved hypothetical protein [Staphylococcus aureus A8117] gi|282928807|ref|ZP_06336400.1| conserved hypothetical leukocidin-like protein 2 [Staphylococcus aureus A10102] gi|295407333|ref|ZP_06817131.1| leukocidin-like protein 2 [Staphylococcus aureus A8819] gi|296277055|ref|ZP_06859562.1| Aerolysin/leukocidin family protein [Staphylococcus aureus subsp. aureus MR1] gi|297246412|ref|ZP_06930254.1| leukocidin-like protein 2 [Staphylococcus aureus A8796] gi|81781225|sp|Q99SN7|LUKL2_STAAN RecName: Full=Uncharacterized leukocidin-like protein 2; Flags: Precursor gi|13701800|dbj|BAB43093.1| SA1813 [Staphylococcus aureus subsp. aureus N315] gi|147741548|gb|ABQ49846.1| Combined Leucocidin/ASH4 hemolysin [Staphylococcus aureus subsp. aureus JH9] gi|149946994|gb|ABR52930.1| Combined Leucocidin/ASH4 hemolysin [Staphylococcus aureus subsp. aureus JH1] gi|156722457|dbj|BAF78874.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257787247|gb|EEV25587.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|257839635|gb|EEV64105.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|257844199|gb|EEV68585.1| aerolysin/Leukocidin family protein [Staphylococcus aureus A9719] gi|257849257|gb|EEV73238.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A9299] gi|257850360|gb|EEV74309.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A8115] gi|257855879|gb|EEV78803.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A6300] gi|257858926|gb|EEV81794.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A6224] gi|257863320|gb|EEV86081.1| combined leucocidin/ASH4 hemolysin [Staphylococcus aureus A5937] gi|262075950|gb|ACY11923.1| Aerolysin/leukocidin family protein [Staphylococcus aureus subsp. aureus ED98] gi|282589542|gb|EFB94630.1| conserved hypothetical leukocidin-like protein 2 [Staphylococcus aureus A10102] gi|282763097|gb|EFC03229.1| conserved hypothetical protein [Staphylococcus aureus A8117] gi|285817691|gb|ADC38178.1| hypothetical protein SA2981_1967 [Staphylococcus aureus 04-02981] gi|294967778|gb|EFG43809.1| leukocidin-like protein 2 [Staphylococcus aureus A8819] gi|297176683|gb|EFH35944.1| leukocidin-like protein 2 [Staphylococcus aureus A8796] gi|312830378|emb|CBX35220.1| leukocidin/Hemolysin toxin family protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128687|gb|EFT84689.1| succinyl-diaminopimelate desuccinylase [Staphylococcus aureus subsp. aureus CGS03] gi|329724185|gb|EGG60700.1| beta-channel forming cytolysin [Staphylococcus aureus subsp. aureus 21172] Length = 351 Score = 37.3 bits (84), Expect = 7.4, Method: Composition-based stats. Identities = 32/331 (9%), Positives = 84/331 (25%), Gaps = 24/331 (7%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDD 60 M+ +A +LS I+ + + ++ + V + Q D + Sbjct: 1 MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN 60 Query: 61 RAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAY 120 + ++ + K +L + D + + V L+ + ++ Sbjct: 61 STVPDDIGKNGKI-TKRTETVYDEKTNILQNLQF-DFIDDPTYD-KNVLLVKKQGSIHSN 117 Query: 121 FAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYL 179 + +N S + + +L + + T S Sbjct: 118 LKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGK 177 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNTFGVQEGFIAVLGDKSLVEQKYSDI 237 F + S + + + + N + V IA L Sbjct: 178 FDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIA----NDLKYGGEVKN 233 Query: 238 EKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITIL 297 + + + + + E SF S+++Y + + + +F Sbjct: 234 RNDELLFYRNTRI-----------ATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEK 282 Query: 298 PGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + + + + P Sbjct: 283 SNEKTQFEVTY---TRNQDILKNRPGIHYAP 310 >gi|302906936|ref|XP_003049536.1| hypothetical protein NECHADRAFT_30409 [Nectria haematococca mpVI 77-13-4] gi|256730472|gb|EEU43823.1| hypothetical protein NECHADRAFT_30409 [Nectria haematococca mpVI 77-13-4] Length = 1225 Score = 37.3 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 4/111 (3%) Query: 424 INPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 +N +L VF A + ++ + A + DL D +I+ + L + Sbjct: 386 VNTATTFLTVLSGYGVFLAPMTGLMVAHYIVVAKMKVNVDDLYTGDSNSIYWYYKGLNWR 445 Query: 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKGQAMILNWMPVVFVFALSSF 534 P VG+ P++ + + +S A+ L ++ ++ F S+F Sbjct: 446 APIAWVVGVAPLLPGFIAAVNLSISISDG----AIELYYLNYMYGFMASAF 492 >gi|297243236|ref|ZP_06927171.1| sortase (surface protein transpeptidase) [Gardnerella vaginalis AMD] gi|296888770|gb|EFH27507.1| sortase (surface protein transpeptidase) [Gardnerella vaginalis AMD] Length = 368 Score = 37.3 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 25/63 (39%) Query: 7 YFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALS 66 +A A+ + AWQ ++ + E E + + + P D + A+ + ALS Sbjct: 29 LLIAFAVICALYIAWQMWWTGEQAEHTQVEARQAISWQNPKTGDKTKIALPQNTDPPALS 88 Query: 67 MSP 69 Sbjct: 89 KPK 91 >gi|253570173|ref|ZP_04847582.1| beta-galactosidase [Bacteroides sp. 1_1_6] gi|251840554|gb|EES68636.1| beta-galactosidase [Bacteroides sp. 1_1_6] Length = 1343 Score = 37.3 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 20/191 (10%), Positives = 55/191 (28%), Gaps = 4/191 (2%) Query: 32 EMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDD 91 M E+ I+ + A D + R+ +K + + Sbjct: 780 PMAEEQILIKEATDRPSISEVTAGAAKQDGFVLDKDTKRILIKGADFEAIFDPQTGSIYS 839 Query: 92 LNLRGYHLDVSSNSPIVT-LLSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKIL 150 L + N P + L + +N N ++A L + T + +++ Sbjct: 840 LKYGNETVIADGNGPKLDALRAFTNNDNWFYAP---WFEHGLHNLIHKATEYKVLNKGNG 896 Query: 151 TPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA 210 T + + N + S ++ + ++ D ++ + + + Sbjct: 897 TLVLSFTVESQAPNAARIKGGTSSGKNSIEELTDRKFGSNDFKFVTNQIWTVYPDGSIEL 956 Query: 211 TNTFGVQEGFI 221 ++ + Sbjct: 957 QSSITSNRSSL 967 >gi|293556772|ref|ZP_06675335.1| lacx protein [Enterococcus faecium E1039] gi|291601104|gb|EFF31393.1| lacx protein [Enterococcus faecium E1039] Length = 291 Score = 37.3 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 25/223 (11%), Positives = 59/223 (26%), Gaps = 10/223 (4%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGY---------HLDVSSNSPIVTLLSPSNTKNAY 120 V ++N LI I GA+ L + + ++P++ + Y Sbjct: 2 TVIIQNDQLIAEIAEHGAELISLKSKEHGLEYIWQGDPAYWGRHAPVLFPFVGRLKDDQY 61 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179 + + + + ++ + FE IS + Sbjct: 62 VYQGKTYQMGQHGFARDMDFEVIEHGQEMASFILRSTPETLEKYPFDFELVISYELGGDG 121 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + V N ++ FS G + P +F + L + + K I+ Sbjct: 122 ITVHYQVANTGEKEMFFSIGGHPTFNVPLEEGLSFEDFYLAFSPLKSRLRLPLKGPFIDM 181 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + + + + + + H Sbjct: 182 DQKTLGQTNTNLALNRELFEQDALVFETRGLNAYAIRSEKSSH 224 >gi|229543751|ref|ZP_04432811.1| protein of unknown function DUF1510 [Bacillus coagulans 36D1] gi|229328171|gb|EEN93846.1| protein of unknown function DUF1510 [Bacillus coagulans 36D1] Length = 204 Score = 37.3 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 29/82 (35%), Gaps = 8/82 (9%) Query: 1 MERNW--------NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNS 52 M+++ N + I +++I + A+ F+ + + K K + + Sbjct: 14 MQQSKRRKTNIILNTLIVIVIALICIVAYSIFFAGNDNSKPAPKEKKAAVTKTASSGHET 73 Query: 53 YAAVLIDDRAQALSMSPRVELK 74 ++ A S +++ Sbjct: 74 TSSHTSKKTADKDSKKSTRKVE 95 >gi|188587830|ref|YP_001919724.1| TPR-repeat-containing protein [Clostridium botulinum E3 str. Alaska E43] gi|188498111|gb|ACD51247.1| TPR-repeat-containing protein [Clostridium botulinum E3 str. Alaska E43] Length = 423 Score = 37.3 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 22/233 (9%), Positives = 70/233 (30%), Gaps = 19/233 (8%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQALSM 67 +A+ L V I + F ++ N+ + ++ + + NS V+ +++ ++ S Sbjct: 181 IIALVLVVFICGTFYVFKEKFKVNLKENDNMSTESSNKAEENSNSSENVVNEEQKESESK 240 Query: 68 SPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL--LSPSNTKNAY---FA 122 P + + +++ L + + ++ L ++ + + Y + Sbjct: 241 IPDTTIDEQNKKAQLDIN-------KLSEHFENGDVDNIYYDLQNVNEQDISDEYKGLYR 293 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKI 182 + + IE+ + + + + I + + Sbjct: 294 RCVNLLKTSGIEVFYGKGMEEFNIQNYEKANIEFSKAYDYSEGSYLKEHIIFYKA----V 349 Query: 183 VDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYS 235 NN + I+ + + + V + + + Y Sbjct: 350 TLEQLNNFDEAIKLY---ELYYSEYPKGSYADNVLYNLSLMFNNTDREKSIYY 399 >gi|187931932|ref|YP_001891917.1| preprotein translocase subunit SecD [Francisella tularensis subsp. mediasiatica FSC147] gi|187712841|gb|ACD31138.1| preprotein translocase, subunit D, membrane protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 645 Score = 37.3 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 42/435 (9%), Positives = 113/435 (25%), Gaps = 29/435 (6%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 N + I L++ I YA N + +++ + ++ T + + + +A Sbjct: 16 KNLLIVIILALAIFYALPNVFGKSPALQISQKDGDVTTQLLVSVENTLAKDKISYQKADI 75 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE 123 + + + L+ + S + + ++ + + + Sbjct: 76 ADDKSNIAITFKD------------VEEQLKAKKVLKDSLSDDYIIAMNMLSNSPNWLSA 123 Query: 124 LDYVSTANNIELPNSNTVW-----NLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 L ++L + L + I L N+I + +E Sbjct: 124 LGANPMNLGLDLRGGMYLMLEADTKTSIDAQLDNSLSIILSAAKDNSINISSSTKAEEKS 183 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 K +N I + + + K +T+ Q+ I + V Y+ + Sbjct: 184 TIKAPQNYFDNGFVSITLANSVDVDKLKQYLSTDFIKTQDPNIIYTNKGNTVFISYNSAK 243 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + S + ++ I + + S + + Sbjct: 244 ILQLKQDAISQVVTVMRNR------INALGVAEASVAQAGDNRVVIEIPGLQDATQAKQI 297 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYN 355 +T +F + E+ + + + +Y A + Sbjct: 298 LGGTSTASFYLVNP-VADRLAAEEQGYKVYSLDNGRGYQSYYSLKGTAVAGGADIIGASP 356 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKA 414 + ++ + + + N + + K K + + Sbjct: 357 SIDRQTGTPIVMVELDRSAASHFRQITGKNIGNPMGVMLVNTTYEKVKDKDGKEKNVVSK 416 Query: 415 MIQLYKTHNINPLAG 429 +L I G Sbjct: 417 TEKLINVATIQSALG 431 >gi|305666862|ref|YP_003863149.1| beta-galactosidase [Maribacter sp. HTCC2170] gi|88709086|gb|EAR01320.1| beta-galactosidase [Maribacter sp. HTCC2170] Length = 1116 Score = 37.3 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 39/324 (12%), Positives = 82/324 (25%), Gaps = 12/324 (3%) Query: 52 SYAAVLIDDRAQALSMSP-RVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTL 110 A ++++A +L+ S ++ + N L N K + +G + Sbjct: 771 KEANPKLEEKALSLTESNGKIIIDNDQLKLVFNKKEGRLTSYVFQG-EELLKDGKGPKPN 829 Query: 111 LSPSNTKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFER 170 + T N + ++ + S F Sbjct: 830 FWRAPTDNDFGNQMHIKNLEWKKASLFSKVSKVTHIIMKDGSVQFEVTYQLPGVETSFTS 889 Query: 171 TISLDEHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEG--------FIA 222 ++ + + + +T+ + R+ K A N FG Sbjct: 890 VYTVYGNGVVAMENTLNSTEYMADVPRIGMRMQLPKQYDAMNYFGRGPWENYQDRRASAF 949 Query: 223 VLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKE--TSFHSQFKYLSD 280 V S V+ +Y + + + + W S++ + I +K ++ + Sbjct: 950 VDLYTSEVKDQYVPYIRPQENGYKTNVRWAAFSNQKNKGLLIVAKNPQKGLGISALHMPN 1009 Query: 281 GHARYQAKFSANEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFY 340 A + G+K I + E G Sbjct: 1010 EDFDTTAGLDYGGNKKVNKTYQIDGIPEVNGSKHTTDIKEQDLVQLNIDMEQRGVAGDDS 1069 Query: 341 FIAKPMFMLMSYFYNLVGNFGIAI 364 + AKP M I Sbjct: 1070 WYAKPQEKYMIKGQQNHSYGFFMI 1093 >gi|257884849|ref|ZP_05664502.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257820687|gb|EEV47835.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] Length = 293 Score = 37.3 bits (84), Expect = 8.1, Method: Composition-based stats. Identities = 25/223 (11%), Positives = 59/223 (26%), Gaps = 10/223 (4%) Query: 70 RVELKNPSLIGSINLKGAQFDDLNLRGY---------HLDVSSNSPIVTLLSPSNTKNAY 120 V ++N LI I GA+ L + + ++P++ + Y Sbjct: 4 TVIIQNDQLIAEIAEHGAELISLKSKEHGLEYIWQGDPAYWGRHAPVLFPFVGRLKDDQY 63 Query: 121 FAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD-EHYL 179 + + + + ++ + FE IS + Sbjct: 64 VYQGKTYQMGQHGFARDMDFEVIEHGQEMASFILRSTPETLEKYPFDFELVISYELGGDG 123 Query: 180 FKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEK 239 + V N ++ FS G + P +F + L + + K I+ Sbjct: 124 ITVHYQVANTGEKEMYFSIGGHPAFNVPLEEGLSFEDFYLAFSPLKSRLRLPLKGPFIDM 183 Query: 240 SSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGH 282 + + + + + + + H Sbjct: 184 DQKTLGQTNTNLALNRELFEQDALVFETRGLNAYAIRSEKSSH 226 >gi|297528718|ref|YP_003669993.1| efflux transporter RND family, MFP subunit [Geobacillus sp. C56-T3] gi|297251970|gb|ADI25416.1| efflux transporter, RND family, MFP subunit [Geobacillus sp. C56-T3] Length = 382 Score = 37.3 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 14/114 (12%), Positives = 36/114 (31%), Gaps = 19/114 (16%) Query: 1 MERNWNYFVAIALSVIIVYA-----WQNFYVYPRIEEMNNERKNIQTVKQPNQVDN---- 51 ME + +++ II + F P ++ +++++ N Sbjct: 1 MENKKRILIGVSVIAIIFLLVGVNVYIAFAGKPTVKTTTLQQRDLSKTITTNGTVELKNV 60 Query: 52 ----------SYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLR 95 + + VL+++ + P ++ N LI I ++ Sbjct: 61 YKVYKDPQLGNISEVLVNENQEVKKGDPLLKYSNQQLILEIQQNNIDIKSAYIK 114 >gi|262038694|ref|ZP_06012054.1| peptidase M23B [Leptotrichia goodfellowii F0264] gi|261747246|gb|EEY34725.1| peptidase M23B [Leptotrichia goodfellowii F0264] Length = 294 Score = 37.3 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 19/169 (11%), Positives = 49/169 (28%), Gaps = 16/169 (9%) Query: 3 RNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRA 62 N N V I L + + + + E + K K + + + Sbjct: 28 ENKNTIVFIGLIAVFLMVF--IFQTSHTENIYATSKKQNVYKTESNNTRENVKNSLHEET 85 Query: 63 QALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFA 122 + L + ++ + I+ G + + + I+++ + S T+ AY Sbjct: 86 EKLKDNK-IQEETGQKDLKIS-IGEKIER----------ETKRNIISIRNGSATRKAYAK 133 Query: 123 ELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERT 171 + S + + I + K + + + + Sbjct: 134 NENRNSAIYYTKYNTRVDNYERED--IRSQEISEKFYWPVGSQNITSKY 180 >gi|156083851|ref|XP_001609409.1| cytochrome oxidase biogenesis protein 1-1 (OXA1) [Babesia bovis T2Bo] gi|154796660|gb|EDO05841.1| cytochrome oxidase biogenesis protein 1-1 (OXA1), putative [Babesia bovis] Length = 408 Score = 37.3 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 73/236 (30%), Gaps = 22/236 (9%) Query: 258 YWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITTT----NFLFAGAK 313 +W S S + + + + ++ T + Sbjct: 60 FWTSNRSKQSSLDAQSSTTVDTSQRNGASSDNESAPLPCSTASTVELTPLGESDGHISDP 119 Query: 314 EFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKL 373 + + R ++ F+ + + + ++ I L T+ +K+ Sbjct: 120 VQEALFELVESHNGNRKGIIQRMLPVEFMRDVLTNI---HESTGLSWATTITLLTLTMKV 176 Query: 374 LFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLA----- 428 F PL + N ++ P EL+E+ ++ + K +++ + L Sbjct: 177 AFIPLWAMGERARRNNAHLVPIATELQERLAEARKEGNVKKSMEIQRIMYKQMLRKSFLK 236 Query: 429 ----GCWPILLQIPVFFAIYKVI-SISLEMRHAPFW-----GWIKDLAAADPTNIF 474 Q F +Y + ++E R P + W+K LA DP IF Sbjct: 237 SAGLQILAAGTQGLTFAWVYGGLKMFAIEPRICPDFVMESPLWLKSLALPDPYYIF 292 >gi|321312731|ref|YP_004205018.1| bacteriophage SPP1 receptor [Bacillus subtilis BSn5] gi|320019005|gb|ADV93991.1| bacteriophage SPP1 receptor [Bacillus subtilis BSn5] Length = 1074 Score = 37.3 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 21/180 (11%), Positives = 51/180 (28%), Gaps = 5/180 (2%) Query: 1 MERNWNYFV----AIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAV 56 M + A+ + +++ + F ++ N + I V + V + Sbjct: 1 MTEQRKSLIKLISAVIIILLLPVLFFRFIGDDPTKKAVNSTRQIAVVNEDTGVLSDEVKS 60 Query: 57 LIDDRAQALSMSPRVEL-KNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSN 115 +D++ L + P ++ + A L + Y V S + + Sbjct: 61 DEEDKSAQFGKEVAAVLGERPDYSWTVVNRSAAETGLASKKYDAIVYIPSDFSKNILSYD 120 Query: 116 TKNAYFAELDYVSTANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLD 175 + A L++ N + L + L + + + D Sbjct: 121 KDHPQKATLEFSIQDNLNAVNKEKVQRELEDAQKTMNKKMSALYWNFVSQKVDNIRGEFD 180 >gi|297564406|ref|YP_003683379.1| membrane protein insertase, YidC/Oxa1 family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848855|gb|ADH70873.1| membrane protein insertase, YidC/Oxa1 family [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 236 Score = 37.3 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 384 VSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAI 443 + + P++ ++ + + +P L ++Y +PLAGC P L Q+PV A+ Sbjct: 58 RAEKARARLAPQLAKITARHRGNPE-RLVAEQRRVYAEAGTSPLAGCLPSLAQVPVMIAL 116 Query: 444 YKVISIS 450 Y V + Sbjct: 117 YGVFIGA 123 >gi|56708193|ref|YP_170089.1| preprotein translocase subunit SecD [Francisella tularensis subsp. tularensis SCHU S4] gi|110670664|ref|YP_667221.1| preprotein translocase subunit SecD [Francisella tularensis subsp. tularensis FSC198] gi|224457296|ref|ZP_03665769.1| preprotein translocase subunit SecD [Francisella tularensis subsp. tularensis MA00-2987] gi|254370680|ref|ZP_04986685.1| preprotein translocase [Francisella tularensis subsp. tularensis FSC033] gi|254875005|ref|ZP_05247715.1| preprotein translocase subunit secD [Francisella tularensis subsp. tularensis MA00-2987] gi|56604685|emb|CAG45748.1| preprotein translocase, subunit D, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320997|emb|CAL09131.1| preprotein translocase, subunit D, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|151568923|gb|EDN34577.1| preprotein translocase [Francisella tularensis subsp. tularensis FSC033] gi|254841004|gb|EET19440.1| preprotein translocase subunit secD [Francisella tularensis subsp. tularensis MA00-2987] gi|282159409|gb|ADA78800.1| preprotein translocase subunit SecD [Francisella tularensis subsp. tularensis NE061598] Length = 645 Score = 36.9 bits (83), Expect = 8.4, Method: Composition-based stats. Identities = 42/435 (9%), Positives = 113/435 (25%), Gaps = 29/435 (6%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 N + I L++ I YA N + +++ + ++ T + + + +A Sbjct: 16 KNLLIVIILALAIFYALPNVFGKSPALQISQKDGDVTTQLLVSVENTLAKDKISYQKADI 75 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE 123 + + + L+ + S + + ++ + + + Sbjct: 76 ADDKSNIAITFKD------------VEEQLKAKKVLKDSLSDDYIIAMNMLSNSPNWLSA 123 Query: 124 LDYVSTANNIELPNSNTVW-----NLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 L ++L + L + I L N+I + +E Sbjct: 124 LGANPMNLGLDLRGGMYLMLEADTKTSIDAQLDNSLSIILSAAKDNSINISSSTKAEEKS 183 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 K +N I + + + K +T+ Q+ I + V Y+ + Sbjct: 184 TIKAPQNYFDNGFVSITLANSVDVDKLKQYLSTDFIKTQDPNIIYTNKGNTVFISYNSAK 243 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + S + ++ I + + S + + Sbjct: 244 ILQLKQDAISQVVTVMRNR------INALGVAEASVAQAGDNRVVIEIPGLQDATQAKQI 297 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYN 355 +T +F + E+ + + + +Y A + Sbjct: 298 LGGTSTASFYLVNP-VADRLAAEEQGYKVYSLDNGRGYQSYYSLKGTAIAGGADIIGASP 356 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKA 414 + ++ + + + N + + K K + + Sbjct: 357 SIDRQTGTPIVMVELDRSAASHFRQITGKNIGNPMGVMLVNTTYEKVKDKDGKEKNVVSK 416 Query: 415 MIQLYKTHNINPLAG 429 +L I G Sbjct: 417 TEKLINVATIQSALG 431 >gi|223042504|ref|ZP_03612553.1| putative aldose 1-epimerase [Staphylococcus capitis SK14] gi|222444167|gb|EEE50263.1| putative aldose 1-epimerase [Staphylococcus capitis SK14] Length = 336 Score = 36.9 bits (83), Expect = 8.6, Method: Composition-based stats. Identities = 27/292 (9%), Positives = 69/292 (23%), Gaps = 20/292 (6%) Query: 69 PRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVS 128 +++ N + GA+ YH + L + YF Sbjct: 13 DLIKIDNDETKIVFSNYGARIVSW---KYH------DNNIILGNVVEADEFYFENPFNFG 63 Query: 129 TANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTIS----LDEHYLFKIVD 184 + G + + ++ I +DE KI+ Sbjct: 64 ATIGRYAGRIKDASFKLDGHTYELENNDSPHHIHGGSKGLDKRIFDYEIIDEIGQIKIIF 123 Query: 185 TVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISN 244 T T ++ + H E + Y ++ + + Sbjct: 124 TTTIKEMEDHYPGDMTIKVTHTYDADHRWTIQYEAESTKRTLFNPTNHVYFNLNRDNNVV 183 Query: 245 FHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILPGKSITT 304 + S + + + + + L+ +I + + Sbjct: 184 DNHRMSSSSLK-------MYTLDDENIVTGDEPLNFSQIFEDEHILFKDIFDSTNQKLQE 236 Query: 305 TNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLMSYFYNL 356 + G + + + FE+LI+ + ++ + Sbjct: 237 QMQRYKGLDHPFEVGDQQLAIDNKEFELLIETDMPNMVIFTFNEPQNWDSDF 288 >gi|229032027|ref|ZP_04188010.1| hypothetical protein bcere0028_40720 [Bacillus cereus AH1271] gi|228729272|gb|EEL80266.1| hypothetical protein bcere0028_40720 [Bacillus cereus AH1271] Length = 215 Score = 36.9 bits (83), Expect = 8.7, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 26/58 (44%) Query: 6 NYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N +AI L ++ + ++Q F + + ++++K Q + N+ + + Q Sbjct: 21 NIAIAIVLILVAIVSYQLFVPERKEQASSSDKKVAQQTTKENKAEKAKGKEETKKNEQ 78 >gi|223041494|ref|ZP_03611697.1| potassium efflux protein KefA [Actinobacillus minor 202] gi|223017752|gb|EEF16159.1| potassium efflux protein KefA [Actinobacillus minor 202] Length = 1106 Score = 36.9 bits (83), Expect = 8.8, Method: Composition-based stats. Identities = 28/215 (13%), Positives = 62/215 (28%), Gaps = 7/215 (3%) Query: 333 LIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNI 392 + I + Y + N I+ + ++ Sbjct: 691 VAPISLIVLILLGYYYTAVYLITHLLNSYFVILFWVFGRYFAYRFVSISARRLAYRRLQE 750 Query: 393 QPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVI---SI 449 + + ++ + K +N L+ V FA+ V+ + Sbjct: 751 KRQKIREQQAADAQSNSKEDAKEEETIKLSVVNQQIFRVTDLIGWVVLFALLYVVWSDLL 810 Query: 450 SLEMRHAPFWGW-IKDLAAADPTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMS 508 S+ W D D + L L + + ++ V I+ ++ F +M++S Sbjct: 811 SVAYYLDGVILWESNDGTQVDSVTLLNLMRALLYVMVTYVLVKNIAGILEVTFFSRMRLS 870 Query: 509 PPPADKGQAMILNWMPVVFVFALSSFPAGLIIYWS 543 Q +I ++ S + L I W+ Sbjct: 871 KGTP---QTIITVLTYIIITIGSVSAFSALGISWT 902 >gi|46398523|gb|AAS91947.1| IcmG protein [Legionella pneumophila] gi|46398529|gb|AAS91950.1| IcmG protein [Legionella pneumophila] Length = 269 Score = 36.9 bits (83), Expect = 8.8, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 14/102 (13%) Query: 2 ERNWNYFVAIALSVII-----VYAWQNFYVYP---------RIEEMNNERKNIQTVKQPN 47 + N +AI V I + W F + +QT+ Sbjct: 48 DIKRNALIAIGAVVFIMVMYKIIGWMFFSDKSSQVTSKPAIPPVTQVATPQPVQTIPTTT 107 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89 + +I+D +E+ SL +N G Q Sbjct: 108 PIQQVQPTTIIEDDPDLKKKVSAIEMTQQSLRSEVNALGEQI 149 >gi|62261535|gb|AAX77996.1| unknown protein [synthetic construct] Length = 680 Score = 36.9 bits (83), Expect = 8.8, Method: Composition-based stats. Identities = 42/435 (9%), Positives = 113/435 (25%), Gaps = 29/435 (6%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 N + I L++ I YA N + +++ + ++ T + + + +A Sbjct: 42 KNLLIVIILALAIFYALPNVFGKSPALQISQKDGDVTTQLLVSVENTLAKDKISYQKADI 101 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE 123 + + + L+ + S + + ++ + + + Sbjct: 102 ADDKSNIAITFKD------------VEEQLKAKKVLKDSLSDDYIIAMNMLSNSPNWLSA 149 Query: 124 LDYVSTANNIELPNSNTVW-----NLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 L ++L + L + I L N+I + +E Sbjct: 150 LGANPMNLGLDLRGGMYLMLEADTKTSIDAQLDNSLSIILSAAKDNSINISSSTKAEEKS 209 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 K +N I + + + K +T+ Q+ I + V Y+ + Sbjct: 210 TIKAPQNYFDNGFVSITLANSVDVDKLKQYLSTDFIKTQDPNIIYTNKGNTVFISYNSAK 269 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + S + ++ I + + S + + Sbjct: 270 ILQLKQDAISQVVTVMRNR------INALGVAEASVAQAGDNRVVIEIPGLQDATQAKQI 323 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYN 355 +T +F + E+ + + + +Y A + Sbjct: 324 LGGTSTASFYLVNP-VADRLAAEEQGYKVYSLDNGRGYQSYYSLKGTAIAGGADIIGASP 382 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKA 414 + ++ + + + N + + K K + + Sbjct: 383 SIDRQTGTPIVMVELDRSAASHFRQITGKNIGNPMGVMLVNTTYEKVKDKDGKEKNVVSK 442 Query: 415 MIQLYKTHNINPLAG 429 +L I G Sbjct: 443 TEKLINVATIQSALG 457 >gi|54296487|ref|YP_122856.1| hypothetical protein lpp0518 [Legionella pneumophila str. Paris] gi|46398543|gb|AAS91957.1| IcmG protein [Legionella pneumophila] gi|46398553|gb|AAS91962.1| IcmG protein [Legionella pneumophila] gi|53750272|emb|CAH11666.1| hypothetical protein lpp0518 [Legionella pneumophila str. Paris] Length = 269 Score = 36.9 bits (83), Expect = 8.9, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 14/102 (13%) Query: 2 ERNWNYFVAIALSVII-----VYAWQNFYVYP---------RIEEMNNERKNIQTVKQPN 47 + N +AI V I + W F + +QT+ Sbjct: 48 DIKRNALIAIGAVVFIMVMYKIIGWMFFSDKSSQVTTKPAIPPVTQVATPQPVQTIPTTT 107 Query: 48 QVDNSYAAVLIDDRAQALSMSPRVELKNPSLIGSINLKGAQF 89 + +I+D +E+ SL +N G Q Sbjct: 108 PIQQVQPTTIIEDDPDLKKKVSAIEMTQQSLRSEVNALGEQI 149 >gi|226952205|ref|ZP_03822669.1| sporulation domain-containing protein [Acinetobacter sp. ATCC 27244] gi|294648856|ref|ZP_06726312.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|226837043|gb|EEH69426.1| sporulation domain-containing protein [Acinetobacter sp. ATCC 27244] gi|292825247|gb|EFF83994.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 203 Score = 36.9 bits (83), Expect = 9.0, Method: Composition-based stats. Identities = 7/79 (8%), Positives = 26/79 (32%), Gaps = 5/79 (6%) Query: 8 FVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQ-----PNQVDNSYAAVLIDDRA 62 +AI ++++ W+ + P ++ +E + + + Sbjct: 31 ILAILCVIVMLMLWKPWQPVPAKSQITSEHYQEENTNKDYRFYDLLPQQQVTPIPEQAVP 90 Query: 63 QALSMSPRVELKNPSLIGS 81 + V +++P + + Sbjct: 91 ETKQQGNVVIIESPRVEAT 109 >gi|254375067|ref|ZP_04990547.1| hypothetical protein FTDG_01255 [Francisella novicida GA99-3548] gi|151572785|gb|EDN38439.1| hypothetical protein FTDG_01255 [Francisella novicida GA99-3548] Length = 286 Score = 36.9 bits (83), Expect = 9.0, Method: Composition-based stats. Identities = 22/215 (10%), Positives = 61/215 (28%), Gaps = 8/215 (3%) Query: 71 VELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTA 130 + +KN +L+ I+ GA+ +++++ + S A + + + Sbjct: 2 ITIKNDNLLVEISELGAEV--------RAVINTSTEHGYMWSGDGRVWAGVSPVLFPVVG 53 Query: 131 NNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEHYLFKIVDTVTNNS 190 + + G + + ++ N + + E Y F++ VT Sbjct: 54 KSHDNKIKYQGKEYPMGNHGLARHTVFDIVLHSENSVILAMETTKEDYPFRLRFEVTYTL 113 Query: 191 IDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNS 250 + I + + + + E+ + + Sbjct: 114 EVNKLITEYNIINLEDSVASCGFGAHPAFACPFDDKHKFSDYEITFSEQKLDFHPITPEA 173 Query: 251 WLGISDKYWASVFIPSKETSFHSQFKYLSDGHARY 285 + KY+ I + +F + S + Sbjct: 174 FYIGETKYFKLSKIALDDHTFDNDALVYSGFTDKR 208 >gi|254373051|ref|ZP_04988540.1| preprotein translocase [Francisella tularensis subsp. novicida GA99-3549] gi|151570778|gb|EDN36432.1| preprotein translocase [Francisella novicida GA99-3549] Length = 645 Score = 36.9 bits (83), Expect = 9.1, Method: Composition-based stats. Identities = 42/435 (9%), Positives = 113/435 (25%), Gaps = 29/435 (6%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 N + I L++ I YA N + +++ + ++ T + + + +A Sbjct: 16 KNLLIVIVLALAIFYALPNVFGKSPALQISQKDGDVTTQLLVSVENTLAKDKISYQKADI 75 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE 123 + + + L+ + S ++ + ++ + + + Sbjct: 76 ADDKSNIAITFKD------------VEEQLKAKKVLKDSLSNDYIIAMNMLSNSPNWLSA 123 Query: 124 LDYVSTANNIELPNSNTVW-----NLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 L ++L + L + I L N+I + +E Sbjct: 124 LGANPMNLGLDLRGGMYLMLEADTKTSIDAQLDNSLSIILSAAKDNSINISSSTKAEEKS 183 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 K N I + + + K +T+ Q+ I + V Y+ + Sbjct: 184 TIKAPQNYLENGFVSITLANSADVDKLKQYLSTDFIKTQDPNIIYTNKGNTVFISYNSAK 243 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + S + ++ I + + S + + Sbjct: 244 ILQLKQDAISQVVTVMRNR------INALGVAEASVAQAGDNRVVIEIPGLQDATQAKQI 297 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYN 355 +T +F + E+ + + + +Y A + Sbjct: 298 LGGTSTASFYLVNP-VADRLAAEEQGYKVYSLDNGRGYQSYYSLKGTAVAGGADIIGASP 356 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKA 414 + ++ + + + N + + K K + + Sbjct: 357 SIDRQTGTPIVMVELDRSAASHFRQITGKNIGNPMGVMLVNTTYEKVKDKDGKEKNVVSK 416 Query: 415 MIQLYKTHNINPLAG 429 +L I G Sbjct: 417 TEKLINVATIQSALG 431 >gi|119713718|gb|ABL97768.1| RND efflux family transporter [uncultured marine bacterium EB0_41B09] Length = 1030 Score = 36.9 bits (83), Expect = 9.4, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 5/92 (5%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 F+ I +S++I F + + + R+ I T P ++ + Sbjct: 11 KKIFLFIVVSLMIYGGVSYFTLPSQEDPTIVSREAIVTTNFPGMSPQRIELLITKKLEEQ 70 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRG 96 + P +++ SI+ G+ + + Sbjct: 71 IRKIPEIKMLT-----SISQTGSSIIHVKIED 97 >gi|302333673|gb|ADL23866.1| leukocidin/lemolysin toxin family protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 351 Score = 36.9 bits (83), Expect = 9.6, Method: Composition-based stats. Identities = 32/333 (9%), Positives = 88/333 (26%), Gaps = 28/333 (8%) Query: 1 MERNWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVD--NSYAAVLI 58 M+ +A +LS I+ + + ++ + V + Q + N Sbjct: 1 MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKEKRNVTNKDKN 60 Query: 59 DDRAQALSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKN 118 + + ++ + ++ + K +L + D + + V L+ + + Sbjct: 61 SPVPDDIGKNGKITKRTETVY---DEKTNILQNLQF-DFIDDPTYD-KNVLLVKKQGSIH 115 Query: 119 AYFAELDYVST-ANNIELPNSNTVWNLISGKILTPTTPIKLVFKNANNILFERTISLDEH 177 + + +N S + + +L + + T S Sbjct: 116 SNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSG 175 Query: 178 YLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTA--TNTFGVQEGFIAVLGDKSLVEQKYS 235 F + S + + + + N + V IA L Sbjct: 176 GKFDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIA----NDLKYGGEV 231 Query: 236 DIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEIT 295 + + + + + E SF S+++Y + + + +F Sbjct: 232 KNRNDELLFYRNTRI-----------ATVENPELSFASKYRYPALVRSGFNPEFLTYLSN 280 Query: 296 ILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIP 328 + + + + P Sbjct: 281 EKSNEKTQFEVTY---TRNQDILKNRPGIHYAP 310 >gi|90409129|ref|ZP_01217249.1| hypothetical protein PCNPT3_08330 [Psychromonas sp. CNPT3] gi|90309762|gb|EAS37927.1| hypothetical protein PCNPT3_08330 [Psychromonas sp. CNPT3] Length = 308 Score = 36.9 bits (83), Expect = 9.6, Method: Composition-based stats. Identities = 7/76 (9%), Positives = 24/76 (31%) Query: 4 NWNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQ 63 N + +AL I + ++ F+ + + + + N+ + + Sbjct: 19 KRNVIIILALLCIAIGSYSYFFSQVPQQLAIEQTQEEKISDTLETNLNTEKPLSDKVLDE 78 Query: 64 ALSMSPRVELKNPSLI 79 + + + P + Sbjct: 79 QSRVKADLIVATPKIT 94 >gi|23465352|ref|NP_695955.1| hypothetical protein BL0776 [Bifidobacterium longum NCC2705] gi|296454129|ref|YP_003661272.1| hypothetical protein BLJ_0976 [Bifidobacterium longum subsp. longum JDM301] gi|317483127|ref|ZP_07942125.1| inner membrane insertion protein [Bifidobacterium sp. 12_1_47BFAA] gi|23325994|gb|AAN24591.1| truncated stage III sporulation protein J (SpoIIIJ) homolog [Bifidobacterium longum NCC2705] gi|296183559|gb|ADH00441.1| hypothetical protein BLJ_0976 [Bifidobacterium longum subsp. longum JDM301] gi|316915426|gb|EFV36850.1| inner membrane insertion protein [Bifidobacterium sp. 12_1_47BFAA] Length = 82 Score = 36.9 bits (83), Expect = 9.6, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPP----QVLQK 413 + GIAIM + +++ PL Q +T M+ +QP+I ++ K+ + +Q+ Sbjct: 3 HSLGIAIMCLVLIIRICLLPLFFSQMRATQRMQVLQPQIQRIQRKYAARKDPRSKEAMQR 62 Query: 414 AMIQLYKTHNINPLAGCW 431 ++ L + HN NPL Sbjct: 63 EIMALQQRHNANPLGSYL 80 >gi|257867312|ref|ZP_05646965.1| ABC transporter [Enterococcus casseliflavus EC30] gi|257873645|ref|ZP_05653298.1| ABC transporter [Enterococcus casseliflavus EC10] gi|257801368|gb|EEV30298.1| ABC transporter [Enterococcus casseliflavus EC30] gi|257807809|gb|EEV36631.1| ABC transporter [Enterococcus casseliflavus EC10] Length = 569 Score = 36.9 bits (83), Expect = 9.9, Method: Composition-based stats. Identities = 18/157 (11%), Positives = 46/157 (29%), Gaps = 2/157 (1%) Query: 327 IPRFEMLIDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVST 386 I M+ F + + + + I ++L + + + Sbjct: 122 IQNLVMISLQSLFRIPFLFIGAFILAMTTMPQLWWIIVLLIIAVLVITALSFTRMGKHFM 181 Query: 387 ANMKNIQPKIDELREKFKQSPP-QVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYK 445 I +E + + QL + ++ I++ +F + Sbjct: 182 IIQNLIDKINGIAKENLMGIRVVKSFVQEENQLQRFSKVSETLTKHNIIV-GTLFSVMIP 240 Query: 446 VISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPF 482 ++ + ++ DLA DPT I + + + Sbjct: 241 SFMLAANLAVVGAIFFVSDLAKDDPTLIGGIASFMNY 277 >gi|254369202|ref|ZP_04985214.1| preprotein translocase [Francisella tularensis subsp. holarctica FSC022] gi|157122152|gb|EDO66292.1| preprotein translocase [Francisella tularensis subsp. holarctica FSC022] Length = 645 Score = 36.9 bits (83), Expect = 9.9, Method: Composition-based stats. Identities = 44/435 (10%), Positives = 114/435 (26%), Gaps = 29/435 (6%) Query: 5 WNYFVAIALSVIIVYAWQNFYVYPRIEEMNNERKNIQTVKQPNQVDNSYAAVLIDDRAQA 64 N + I L++ I YA N + +++ + ++ T + + + +A Sbjct: 16 KNLLIVIILALAIFYALPNVFGKSPALQISQKDGDVTTQLLVSVENTLAKDKISYQKADI 75 Query: 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSS-NSPIVTLLSPSNTKNAYFAE 123 + + + L+ + S + + +S + + + Sbjct: 76 ADDKSNIAITFKD------------VEEQLKAKKVLKDSLSDDYIIAMSMLSNSPNWLSA 123 Query: 124 LDYVSTANNIELPNSNTVW-----NLISGKILTPTTPIKLVFKNANNILFERTISLDEHY 178 L ++L + L + I L N+I + +E Sbjct: 124 LGANPMNLGLDLRGGMYLMLEADTKTSIDAQLDNSLSIILSAAKDNSINISSSTKAEEKS 183 Query: 179 LFKIVDTVTNNSIDQIRFSPRGRIMRHKPQTATNTFGVQEGFIAVLGDKSLVEQKYSDIE 238 K +N I + + + K +T+ Q+ I + V Y+ + Sbjct: 184 TIKAPQNYFDNGFVSITLANSVDVDKLKQYLSTDFIKTQDPNIIYTNKGNTVFISYNSAK 243 Query: 239 KSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSANEITILP 298 + S + ++ I + + S + + Sbjct: 244 ILQLKQDAISQVVTVMRNR------INALGVAEASVAQAGDNRVVIEIPGLQDATQAKQI 297 Query: 299 GKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYF---IAKPMFMLMSYFYN 355 +T +F + E+ + + + +Y A + Sbjct: 298 LGGTSTASFYLVNP-VADRLAAEEQGYKVYSLDNGRGYQSYYSLKGTAVAGGADIIGASP 356 Query: 356 LVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDEL-REKFKQSPPQVLQKA 414 + A ++ + + + N + + K K + + Sbjct: 357 SIYRQTGAPIVMVELDRSAASHFRQITGKNIGNPMGVMLVNTTYEKVKDKDGKEKNVVSK 416 Query: 415 MIQLYKTHNINPLAG 429 +L I G Sbjct: 417 TEKLINVATIQSALG 431 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.310 0.108 0.280 Lambda K H 0.267 0.0332 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,298,659,054 Number of Sequences: 14124377 Number of extensions: 160638807 Number of successful extensions: 1259249 Number of sequences better than 10.0: 4603 Number of HSP's better than 10.0 without gapping: 3182 Number of HSP's successfully gapped in prelim test: 1421 Number of HSP's that attempted gapping in prelim test: 1240746 Number of HSP's gapped (non-prelim): 7721 length of query: 581 length of database: 4,842,793,630 effective HSP length: 145 effective length of query: 436 effective length of database: 2,794,758,965 effective search space: 1218514908740 effective search space used: 1218514908740 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 83 (36.9 bits)